BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13670
(380 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|357606259|gb|EHJ64985.1| putative DNA mismatch repair protein pms2 [Danaus plexippus]
Length = 820
Score = 307 bits (786), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 190/459 (41%), Positives = 255/459 (55%), Gaps = 89/459 (19%)
Query: 1 MKLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLL---------- 50
+KL+NE+Y Q+N HQYPF+ LN+ + R SVDVNVTPDKR++F+ EK +L
Sbjct: 346 IKLINEIYRQYNPHQYPFVFLNVNIERTSVDVNVTPDKRKVFLTKEKAILDVVKCSLLKM 405
Query: 51 -----ATVKVHITDSYAI--------------GFTVDGNNMNQSMEQDPSSDVDMEKIQR 91
+VKV A F +N + S++ S++ D +++R
Sbjct: 406 FEDIPRSVKVEAPSIVAAVKTEPELSQPRIFQSFLKQFSNKSSSIKPSESNNPDKCELKR 465
Query: 92 SNS---------------------------------EEVEHETIPVPSEDNSNFSHEANL 118
+S E EH + V +E+N ++E N+
Sbjct: 466 KSSSVLDNFIQIKKTLVTKQEDNLIEEETEEKCMLDENKEHNILNVSTEENIENANERNI 525
Query: 119 QQSPE------------------TVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDII 160
S E ++E P +VI D +L + R + S++ I
Sbjct: 526 NNSLENRDTTIVEESHTIYCNTKSIETTKPKGN-KVITDKEQLGKTVRMEVTLKTSMEQI 584
Query: 161 QDQLKARYARRTVQAQ-DRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFN 219
+ +L Y + ++ DR RF IDP NK+ E EL+R I+K F+KMKI+GQFN
Sbjct: 585 K-KLSDTYKKNKDNSKPDRI---RFKTKIDPVFNKKCEEELSREIEKQSFKKMKIIGQFN 640
Query: 220 LGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNL 279
LGFII + D DLFIIDQHATDE YNFETLQKTT + SQKLV+PQ L LT +N+ IL DNL
Sbjct: 641 LGFIITRLDDDLFIIDQHATDEIYNFETLQKTTELTSQKLVIPQQLELTGVNEQILMDNL 700
Query: 280 PVFYKNGFEFSFD--SSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSR 337
+F KNGF F+ D ++ V L +LPMSKN G+EDIEELLF+L+ N +E+CRPSR
Sbjct: 701 DIFKKNGFTFAIDETAAPTKRVKLLTLPMSKNWIFGKEDIEELLFILKE-NHSEYCRPSR 759
Query: 338 IRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+RAMFASRACRKSVMIG ALS G+M LV +M ID+PW
Sbjct: 760 VRAMFASRACRKSVMIGTALSKGDMRKLVDHMAEIDKPW 798
>gi|443684699|gb|ELT88556.1| hypothetical protein CAPTEDRAFT_218769 [Capitella teleta]
Length = 469
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 167/413 (40%), Positives = 236/413 (57%), Gaps = 44/413 (10%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVK---VHIT 58
++VNE YH FN HQ+PF++LNI + D+VDVNVTPDKRQ+F+ HEKLLLAT+K V +
Sbjct: 41 RVVNEAYHMFNRHQFPFVLLNISLVNDAVDVNVTPDKRQVFIQHEKLLLATLKASLVKLF 100
Query: 59 DSYAIGFTVDGNNMNQSMEQDPSSD------------------------------VDMEK 88
+ + ++++ + P + +++ K
Sbjct: 101 EQKSTSYSLNQPESSSLSSSAPEVELLHYKDFLLINQNALLRQHLLVVLLKRRVPINVPK 160
Query: 89 IQRSNSEEVEHETIPVPSEDNSNFSHE---ANLQQSPETVEPDTPDETIEVIDDMPRLQG 145
+ + + +PV SE + + AN Q P +P+T + T D +L+
Sbjct: 161 VIEKETLIAQEGELPVQSESWTALKTKDSIANNFQVP--ADPETLNITFTETDQKLKLKD 218
Query: 146 SYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIK 205
R+ + V ++ ++ L++ A + C + F A IDP+ N+ AE EL R IK
Sbjct: 219 PRREIS-VPFDMNALKTTLQSHSAAEKASQLNPC--STFRAKIDPTDNQSAEEELRREIK 275
Query: 206 KSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNL 265
K F M+I+GQFNLGF+I + + DLFIIDQHA+DEKYNFE LQK T++ SQ+LV PQ L
Sbjct: 276 KESFCAMEILGQFNLGFVIARLNQDLFIIDQHASDEKYNFEMLQKHTVLSSQRLVCPQIL 335
Query: 266 HLTKINQCILKDNLPVFYKNGFEFSFDSSDDGN--VLLTSLPMSKNTTLGREDIEELLFM 323
LT N+ IL DNL +F +NGF F D V L S P+SKN GR+DIEEL+FM
Sbjct: 336 PLTAANEVILMDNLDIFKRNGFAFEVDEEGPPTQRVKLVSKPISKNWEFGRDDIEELVFM 395
Query: 324 LQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
L ++ CRP+R+R M ASRACRKS+MIG AL+ EM L+R+M I+ PW
Sbjct: 396 LSDSSGI-MCRPTRVRQMLASRACRKSIMIGTALNQPEMNKLLRHMSEIEHPW 447
>gi|156363567|ref|XP_001626114.1| predicted protein [Nematostella vectensis]
gi|156212978|gb|EDO34014.1| predicted protein [Nematostella vectensis]
Length = 775
Score = 281 bits (719), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 170/456 (37%), Positives = 240/456 (52%), Gaps = 89/456 (19%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHI---- 57
++V+EVYH +N HQ+PF++L+I + RD+VDVNVTPDKRQ+F+ E LLLAT++ +
Sbjct: 305 RVVSEVYHMYNRHQFPFVMLDISLKRDAVDVNVTPDKRQVFLQQETLLLATLRTSLIKMF 364
Query: 58 ---TDSY------------------------AIGFTVDGNNMNQSM-------------- 76
T +Y A G + GNN S
Sbjct: 365 DPGTSTYEVNQKMFTQIKLLPSPTQASHFSLASGDSPSGNNAGASTSGGFHSNSLNSLHG 424
Query: 77 ------------EQDPSSDVDM-------EKIQRSNSEEVEHETIPVPSEDNSNFSHEAN 117
E PS + E++ R N E I + +DN N S +
Sbjct: 425 NNNVSGLWRKFSELSPSGEKKQSQHEEQKERVHRGNKPTKVKE-ILLLKKDNKNDSLALD 483
Query: 118 LQQSPETVEPDTPDETIEVIDDMPRLQGSY-------------RQSTPVTLSLDIIQDQL 164
++ D +E+ ++ +G++ R++ V S++ ++ L
Sbjct: 484 SSSIFPVMQSDLKEESFHTRQNIQETRGTFSNDQEDLKVIFSRRKTVEVEFSIEKLRTCL 543
Query: 165 KARYARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFII 224
+ T + R F A I P N AE EL R I++ F +M+IVGQFNLGFI+
Sbjct: 544 HSLNTSITQNGKVRI----FRAKISPENNSAAEEELTRNIQRGSFARMEIVGQFNLGFIL 599
Query: 225 VKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYK 284
K D+DLFIIDQHA+DEKYNFE Q+ T++++Q+L++P+ L LT +N+ IL DNL +F K
Sbjct: 600 AKLDNDLFIIDQHASDEKYNFEMQQRNTVLRNQRLIIPRKLELTAVNESILLDNLEIFRK 659
Query: 285 NGFEFSFDSSDDG----NVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRA 340
NGFEF D DD V L S+P SKN T G ED+EEL+FML CRP+R+R
Sbjct: 660 NGFEFQID--DDAPATQKVKLVSVPTSKNWTFGVEDVEELIFMLSDAPGIL-CRPTRVRK 716
Query: 341 MFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
MFASRACR S+M+G ALS +M G+VR+MG + PW
Sbjct: 717 MFASRACRMSIMVGTALSHAQMQGIVRHMGEMKHPW 752
>gi|328708648|ref|XP_003243755.1| PREDICTED: mismatch repair endonuclease PMS2-like [Acyrthosiphon
pisum]
Length = 591
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 126/218 (57%), Positives = 164/218 (75%), Gaps = 4/218 (1%)
Query: 162 DQLKARYAR-RTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNL 220
+Q+K R + R +++ + ++ RF+A IDP KN++AE EL+R I K MF +M I+GQFNL
Sbjct: 352 EQIKQRLSNLRFRRSEKQKIKTRFYATIDPIKNQQAEVELSREISKDMFSRMSIIGQFNL 411
Query: 221 GFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLP 280
GFII K D+DLFI+DQHATDEKYNFETLQ TT I SQKLVVPQ L LT +N+ +L +N+
Sbjct: 412 GFIITKLDADLFIVDQHATDEKYNFETLQNTTKITSQKLVVPQQLELTAVNEIVLMENIN 471
Query: 281 VFYKNGFEFSF--DSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRI 338
VF NGF+F F D+ V LT +PMS N + G+ED++ELLFMLQ +T CRPSR+
Sbjct: 472 VFQMNGFDFQFQQDAEPTKKVKLTMIPMSNNWSFGKEDVDELLFMLQDAPNT-LCRPSRV 530
Query: 339 RAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
R+MFASRACRKSVMIG+ L+ G+M L+ +MG I+QPW
Sbjct: 531 RSMFASRACRKSVMIGKVLNFGDMRKLIDHMGDIEQPW 568
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 45/57 (78%)
Query: 1 MKLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHI 57
+K VNEVYHQ+N +QYPF+ LNI ++R VD+NVTPDKRQIF+ +E L++ +K +
Sbjct: 49 IKTVNEVYHQYNQNQYPFVYLNITIARAEVDINVTPDKRQIFLSNENYLVSIIKASL 105
>gi|301604746|ref|XP_002932025.1| PREDICTED: mismatch repair endonuclease PMS2-like [Xenopus
(Silurana) tropicalis]
Length = 848
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 130/256 (50%), Positives = 170/256 (66%), Gaps = 16/256 (6%)
Query: 124 TVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSL-DIIQDQLKARYARRTVQAQDRCVEN 182
TV+PDT D + + R++ P+ S+ ++ + + + +R + +R
Sbjct: 585 TVQPDTVDAPMNI----------QRRTKPLPFSMANLTKGMERIKQQQRIKEETER--YR 632
Query: 183 RFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEK 242
RF A I+P N+ AE EL + I K MF KM+I+GQFNLGFII K DSDLF+IDQHATDEK
Sbjct: 633 RFRAKINPGDNQAAEDELRKEISKEMFAKMEIIGQFNLGFIITKLDSDLFMIDQHATDEK 692
Query: 243 YNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSD--DGNVL 300
YNFE LQ+ T+++ Q+L+ PQ LHLT +N+ +L DNL +F KNGF+F FD V
Sbjct: 693 YNFEMLQQETVLQGQRLIAPQKLHLTAVNETVLIDNLDIFKKNGFDFIFDEEAPITERVK 752
Query: 301 LTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVG 360
L SLP SKN T G++DIEEL+FML + CRPSR+R MFASRACRKSVMIG AL+V
Sbjct: 753 LISLPTSKNWTFGQQDIEELIFMLSDSPGV-MCRPSRVRQMFASRACRKSVMIGTALNVH 811
Query: 361 EMTGLVRNMGRIDQPW 376
EM LV +MG I+ PW
Sbjct: 812 EMKKLVTHMGEIEHPW 827
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 35/40 (87%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQI 41
K+VNEVYH +N HQYPF++LNI +S + VD+NVTPDKRQI
Sbjct: 303 KIVNEVYHLYNRHQYPFVVLNICVSSECVDINVTPDKRQI 342
>gi|158286232|ref|XP_308635.4| AGAP007126-PA [Anopheles gambiae str. PEST]
gi|157020370|gb|EAA04111.4| AGAP007126-PA [Anopheles gambiae str. PEST]
Length = 882
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 129/243 (53%), Positives = 168/243 (69%), Gaps = 10/243 (4%)
Query: 138 DDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDR--CVENRFHANIDPSKNKE 195
DDM +R +++S D+++ +K ++ + D+ RF + I+P+ NK
Sbjct: 607 DDM-----RHRNQQQLSVSWDLLEQLIKREQTLQSARTADQNSLTRLRFKSKINPTSNKA 661
Query: 196 AESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIK 255
AE+EL I K F KM+IVGQFNLGFIIV+ DLFI+DQHATDEKYNFE LQ+TT+++
Sbjct: 662 AENELQTEITKDDFAKMEIVGQFNLGFIIVRLGDDLFIVDQHATDEKYNFEDLQRTTVLQ 721
Query: 256 SQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSS--DDGNVLLTSLPMSKNTTLG 313
+Q+LVVPQ L LT +N+ +L DNL VF NGF+F D + V L + P S+N G
Sbjct: 722 NQRLVVPQPLELTAVNEMVLIDNLDVFEMNGFKFEVDGAAPTTKKVRLMAKPYSRNWEFG 781
Query: 314 REDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRID 373
+EDI+EL+FM+Q ST CRPSR+RAMFASRACRKSVMIGRALSV EM L+R+MG ID
Sbjct: 782 KEDIDELIFMMQDAPSTV-CRPSRVRAMFASRACRKSVMIGRALSVREMERLIRHMGEID 840
Query: 374 QPW 376
QPW
Sbjct: 841 QPW 843
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 51/75 (68%), Gaps = 3/75 (4%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
KL+N+ YH++N HQ PF+ LN+ + R VDVN+TPDKRQ+ +++EK+L+ ++ I ++
Sbjct: 321 KLINDAYHRYNVHQQPFVFLNLMLDRSEVDVNLTPDKRQVLVNNEKILMLAIRKSIKKTF 380
Query: 62 AI---GFTVDGNNMN 73
FT+ N++
Sbjct: 381 QTVPSSFTMQNQNLS 395
>gi|383853734|ref|XP_003702377.1| PREDICTED: mismatch repair endonuclease PMS2-like [Megachile
rotundata]
Length = 692
Score = 246 bits (629), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 145/391 (37%), Positives = 230/391 (58%), Gaps = 35/391 (8%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
KL+N +YH++NN QYPFI LN+++ + S D+NVTPDKR IF E+L+LAT+K + +
Sbjct: 300 KLINHIYHRYNNKQYPFIFLNLKLDKQSTDINVTPDKRTIFCTQERLILATLKFSLISVW 359
Query: 62 AIGFTVDGNNMNQSMEQDPSSDVDM---EKIQRSNSEEVEHETIPVPSEDNSNFSHEANL 118
+ + ++ P S+++ I +N++ P++ N ++
Sbjct: 360 --------DKLQANLNIKPISELNFGTKRGISPTNTDR--------PAKRFQNLYISSDT 403
Query: 119 QQSPET-VEPDTPDETIEVIDDMPR-LQGSYRQ--STPVTLSLDIIQDQLKARYARRTVQ 174
+ S E V+ D+ ++ IE D++ + G ++ +T + +++ I+ +L+ + R +
Sbjct: 404 KHSEENNVQHDSTNKVIEYDDNVQNNIVGPVKKLDNTEMLINISTIKQKLQEK---RVIS 460
Query: 175 AQDRCVEN---RFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDL 231
+ N ++ ++ +KN AE EL R + K F KM+I+GQFNLGFII + + DL
Sbjct: 461 LKSNMAVNTKIKYKVQMECTKNSTAEDELKRELTKESFLKMEIIGQFNLGFIIARLEEDL 520
Query: 232 FIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEF-- 289
FIIDQHATDEKY FE L T +K+QKL+VP+ L+L+ +N+ IL ++ F NGF F
Sbjct: 521 FIIDQHATDEKYRFEKLNNETQLKTQKLIVPKALNLSSLNETILIEHQNTFEDNGFCFKI 580
Query: 290 SFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHT---NSTEHC-RPSRIRAMFASR 345
+ ++ V LT +P+S G+EDIEEL+F+++ N H RPSR+R M ASR
Sbjct: 581 NLEAESGHRVELTGMPVSGYWQFGQEDIEELIFLIREGGVENKENHIYRPSRVRQMLASR 640
Query: 346 ACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
ACR +VMIG AL+ EM LV M +++ PW
Sbjct: 641 ACRSAVMIGTALNNNEMQKLVTQMAQMENPW 671
>gi|47226069|emb|CAG04443.1| unnamed protein product [Tetraodon nigroviridis]
Length = 866
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 128/258 (49%), Positives = 172/258 (66%), Gaps = 7/258 (2%)
Query: 122 PET-VEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCV 180
PE+ V + D++ +D LQ R+ P+ SL + ++K ++ +A++
Sbjct: 592 PESSVSSNPSDKSTLAVDSPACLQ---RRMVPLQFSLRELAGKMKRLLDQQAHRAKEDLC 648
Query: 181 ENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATD 240
RF A I P +N+ AE+EL + I+K MF+ M+I+GQFNLGFII K +SD+FIIDQHATD
Sbjct: 649 YRRFRAKISPGENQSAEAELKKEIRKDMFKDMEIIGQFNLGFIIAKLNSDVFIIDQHATD 708
Query: 241 EKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDG--N 298
EKYNFE LQ+ T+++ QKL+ PQ LHLT +++ IL +N+ +F KNGFEF D
Sbjct: 709 EKYNFEMLQQHTVLQGQKLIAPQKLHLTAVSENILMENIDIFRKNGFEFQVDEDAQAMER 768
Query: 299 VLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALS 358
V LTSLP SKN T G DIEEL+FML + CRPSR+R MFASRACRKSVMIG ALS
Sbjct: 769 VKLTSLPTSKNWTFGPADIEELIFMLSDSPGV-MCRPSRVRQMFASRACRKSVMIGTALS 827
Query: 359 VGEMTGLVRNMGRIDQPW 376
+ EM L+ +MG ++ PW
Sbjct: 828 LTEMKKLLVHMGEMEHPW 845
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 49/96 (51%), Gaps = 32/96 (33%)
Query: 1 MKLVNEVYHQFNNHQYPFIILNIEM--------------------------------SRD 28
MKLVNEVYH +N HQYPF+ LNI + S +
Sbjct: 292 MKLVNEVYHMYNRHQYPFVALNISVASGKQAASLRVAKRAAGSLFLSVSSLYLSSPVSSE 351
Query: 29 SVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIG 64
VDVNVTPDKRQ+F+ EKLLLA +K + +Y G
Sbjct: 352 CVDVNVTPDKRQVFLQEEKLLLAALKSSLIHTYEAG 387
>gi|449283315|gb|EMC89990.1| Mismatch repair endonuclease PMS2, partial [Columba livia]
Length = 893
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 124/235 (52%), Positives = 162/235 (68%), Gaps = 12/235 (5%)
Query: 148 RQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVE----NRFHANIDPSKNKEAESELNRV 203
+++ P+ S+ ++ +++K + +Q Q + E RF A I P +NK AE EL +
Sbjct: 644 KKTVPLEFSMKVLAEKVK-----KVIQQQQKSTEAQNYRRFKAKISPGENKVAEDELRKE 698
Query: 204 IKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQ 263
I K MF KM+I+GQFNLGFII K +SDLFIIDQHATDEKYNFE LQ+ T+++ QKL+ PQ
Sbjct: 699 ISKEMFAKMEIIGQFNLGFIIAKLNSDLFIIDQHATDEKYNFEMLQQHTVLQGQKLIAPQ 758
Query: 264 NLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGN--VLLTSLPMSKNTTLGREDIEELL 321
NL+LT +N+ +L +NL +F KNGF+F + + V L SLP SKN T G +DI+EL+
Sbjct: 759 NLNLTAVNETVLIENLEIFRKNGFDFVINENAPATQKVKLVSLPTSKNWTFGAQDIDELI 818
Query: 322 FMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
FML CRPSR+R MFASRACRKSVMIG ALSV EM LV +MG I+ PW
Sbjct: 819 FMLSDCPGA-MCRPSRVRQMFASRACRKSVMIGTALSVQEMRKLVTHMGEIEHPW 872
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 56/76 (73%), Gaps = 2/76 (2%)
Query: 1 MKLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
+KLVNEVYH +N HQYPF++LNI + + VD+NVTPDKRQI + EKLLLA +K +T+
Sbjct: 318 VKLVNEVYHLYNKHQYPFVVLNICVDSECVDINVTPDKRQILLQEEKLLLAILKASLTEM 377
Query: 61 YAIGFTVDGNNMNQSM 76
+ G V+ N+NQ +
Sbjct: 378 F--GSDVNKLNVNQKL 391
>gi|157136917|ref|XP_001663861.1| DNA mismatch repair protein pms2 [Aedes aegypti]
gi|108869823|gb|EAT34048.1| AAEL013690-PA [Aedes aegypti]
Length = 926
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 138/262 (52%), Positives = 174/262 (66%), Gaps = 16/262 (6%)
Query: 128 DTP--DETIEVID-DMPRL-QGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVEN- 182
D+P D EVI+ D P + S+R ST L +DI + ++ Q+ D V N
Sbjct: 638 DSPIVDRKPEVIEIDQPSFKEDSFRPSTKKCLDIDISSLKTLIDEEQKLTQS-DEAVRNT 696
Query: 183 -----RFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQH 237
+F + I+PS N+ AE EL I K F +M+I+GQFNLGFII + + DLFIIDQH
Sbjct: 697 SLSRLKFKSKINPSNNRAAEDELQTEISKDRFAQMEIIGQFNLGFIIARLEQDLFIIDQH 756
Query: 238 ATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDG 297
ATDEKYNFE LQ+TT++++QKLVVPQ L LT +N+ IL DNL +F NGF+F D S +
Sbjct: 757 ATDEKYNFEDLQRTTVLQNQKLVVPQQLELTAVNEMILMDNLEIFEMNGFKFEIDGSAEP 816
Query: 298 N--VLLTSLPMSKNTTLGREDIEELLFMLQHT-NSTEHCRPSRIRAMFASRACRKSVMIG 354
V L + P SKN G+EDI+EL+FMLQ NS CRPSR+RAMFASRACRKSVMIG
Sbjct: 817 TRKVKLVAKPFSKNWEFGKEDIDELIFMLQDAPNSV--CRPSRVRAMFASRACRKSVMIG 874
Query: 355 RALSVGEMTGLVRNMGRIDQPW 376
+ALS EM LV +MG I+QPW
Sbjct: 875 KALSKAEMRRLVSHMGEIEQPW 896
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 48/62 (77%)
Query: 1 MKLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
+K+VNE YH++N +Q PF+ LN++M+R VDVN+TPDKRQI +++EK+LL +K + +
Sbjct: 364 IKMVNETYHKYNVNQCPFVYLNLKMARSDVDVNLTPDKRQILVNNEKILLLALKKSLMKT 423
Query: 61 YA 62
Y
Sbjct: 424 YG 425
>gi|432921871|ref|XP_004080263.1| PREDICTED: uncharacterized protein LOC101169320 [Oryzias latipes]
Length = 828
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 128/233 (54%), Positives = 159/233 (68%), Gaps = 9/233 (3%)
Query: 148 RQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKS 207
+ + P+ SL + LK +R + D RF A I+P +N+ AE EL + I K
Sbjct: 580 KTTAPLQFSLQELMGNLKLLQEQR--RKSDGLQYRRFRAKINPGENQSAEEELRKEISKD 637
Query: 208 MFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHL 267
MF++MKI+GQFNLGFII K +SD+FIIDQHATDEKYNFE LQ+ TL++ QKL+ PQ LHL
Sbjct: 638 MFKEMKIIGQFNLGFIITKLNSDIFIIDQHATDEKYNFEMLQQHTLLQGQKLIAPQKLHL 697
Query: 268 TKINQCILKDNLPVFYKNGFEFSFDSSDDGNVL----LTSLPMSKNTTLGREDIEELLFM 323
T I++ +L +N+ VF KNGFEF D +D V+ L SLP SKN T G DIEEL+FM
Sbjct: 698 TAISENVLMENIEVFRKNGFEFLID--EDAQVMERVRLVSLPTSKNWTFGPADIEELIFM 755
Query: 324 LQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
L + CRPSR+R MFASRACRKSVMIG ALSV EM LV +MG I+ PW
Sbjct: 756 LSDSPGV-MCRPSRVRQMFASRACRKSVMIGTALSVSEMKKLVVHMGEIEHPW 807
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 49/63 (77%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K+VNEVYH +N HQYPF+ LNI ++ + VDVNVTPDKRQIF+ EK+LLAT+K + + Y
Sbjct: 302 KVVNEVYHSYNRHQYPFVALNIAVASECVDVNVTPDKRQIFLQEEKVLLATLKTSLINMY 361
Query: 62 AIG 64
G
Sbjct: 362 EAG 364
>gi|410896097|ref|XP_003961536.1| PREDICTED: mismatch repair endonuclease PMS2-like [Takifugu
rubripes]
Length = 837
Score = 244 bits (623), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 122/231 (52%), Positives = 158/231 (68%), Gaps = 3/231 (1%)
Query: 148 RQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKS 207
R+ P+ SL + ++K ++ +A++ RF A I+P +N+ AE+EL + I K
Sbjct: 589 RRKVPLQFSLQELAAKMKRLQDQQAHRAKEDLCYRRFKAKINPGENQSAEAELKKEISKE 648
Query: 208 MFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHL 267
MF+ M+I+GQFNLGFII K +SD+FIIDQHATDEKYNFE LQ+ T+++ QKL+ PQ LHL
Sbjct: 649 MFKDMEIIGQFNLGFIIAKLESDIFIIDQHATDEKYNFEMLQQHTVLQGQKLIAPQKLHL 708
Query: 268 TKINQCILKDNLPVFYKNGFEFSFDSSDDG--NVLLTSLPMSKNTTLGREDIEELLFMLQ 325
T +++ L DN+ +F KNGFEF D V L SLP SKN T G DIEEL+FML
Sbjct: 709 TAVSENTLIDNIDIFRKNGFEFQVDEDAQAMERVKLLSLPTSKNWTFGPADIEELIFMLS 768
Query: 326 HTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+ CRPSR+R MFASRACRKSVMIG ALSV EM L+ +MG I+ PW
Sbjct: 769 DSPGV-MCRPSRVRQMFASRACRKSVMIGTALSVNEMKKLLVHMGEIEHPW 818
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 70/124 (56%), Gaps = 15/124 (12%)
Query: 1 MKLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
+KLVNEVYH +N HQYPF+ LNI ++ + VDVNVTPDKRQIF+ EKLLLA +K +
Sbjct: 294 IKLVNEVYHMYNRHQYPFVALNISVASECVDVNVTPDKRQIFLQEEKLLLAVLKSSLISM 353
Query: 61 YAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQ 120
Y G N ++ + PS++ I + P +D+ + +L Q
Sbjct: 354 YEAGV----NKISLNFSSLPSANTSASDICQ-----------PATFKDSRTEPNAESLTQ 398
Query: 121 SPET 124
SP+T
Sbjct: 399 SPKT 402
>gi|157124912|ref|XP_001660584.1| DNA mismatch repair protein pms2 [Aedes aegypti]
gi|108873824|gb|EAT38049.1| AAEL010033-PA [Aedes aegypti]
Length = 874
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 136/262 (51%), Positives = 173/262 (66%), Gaps = 16/262 (6%)
Query: 128 DTP--DETIEVID-DMPRL-QGSYRQSTPVTLSLDI------IQDQLKARYARRTVQAQD 177
D+P D EVI+ D P + S+R ST L +DI I ++ K ++ +
Sbjct: 586 DSPIVDRKPEVIEIDQPSFKEDSFRPSTKKCLDIDISSLKTLIDEEYKLAHSDEAFR-NT 644
Query: 178 RCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQH 237
+F + I+PS N+ AE EL I K F +M+I+GQFNLGFII + + DLFIIDQH
Sbjct: 645 SLSRLKFKSKINPSNNRAAEDELQTEISKDRFAQMEIIGQFNLGFIIARLEQDLFIIDQH 704
Query: 238 ATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDG 297
ATDEKYNFE LQ+TT++++QKLVVPQ L LT +N+ IL DNL +F NGF+F D S +
Sbjct: 705 ATDEKYNFEDLQRTTVLQNQKLVVPQQLELTAVNEMILMDNLEIFEMNGFKFEIDGSAEP 764
Query: 298 N--VLLTSLPMSKNTTLGREDIEELLFMLQHT-NSTEHCRPSRIRAMFASRACRKSVMIG 354
V L + P SKN G+EDI+EL+FMLQ NS CRPSR+RAMFASRACRKSVMIG
Sbjct: 765 TRKVKLVAKPFSKNWEFGKEDIDELIFMLQDAPNSV--CRPSRVRAMFASRACRKSVMIG 822
Query: 355 RALSVGEMTGLVRNMGRIDQPW 376
+ALS EM LV +MG I+QPW
Sbjct: 823 KALSKAEMRRLVSHMGEIEQPW 844
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 48/62 (77%)
Query: 1 MKLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
+K+VNE YH++N +Q PF+ LN++M+R VDVN+TPDKRQI +++EK+LL +K + +
Sbjct: 320 IKMVNETYHKYNVNQCPFVYLNLKMARSDVDVNLTPDKRQILVNNEKILLLALKKSLMKT 379
Query: 61 YA 62
Y
Sbjct: 380 YG 381
>gi|312385621|gb|EFR30068.1| hypothetical protein AND_00556 [Anopheles darlingi]
Length = 878
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 123/226 (54%), Positives = 159/226 (70%), Gaps = 5/226 (2%)
Query: 155 LSLDIIQDQLKARYARRTVQAQDRC--VENRFHANIDPSKNKEAESELNRVIKKSMFEKM 212
+SLD ++ ++ + + +RC RF + I+P+ NK AE+EL I K+ F M
Sbjct: 627 VSLDTLEPLIERENKLQAEKIANRCSLTRLRFKSKINPTSNKAAENELQTEITKADFAAM 686
Query: 213 KIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQ 272
KIVGQFNLGFI+ + DLFI+DQHATDEKYNFE LQ+TT++++Q+LVVPQ L LT +N+
Sbjct: 687 KIVGQFNLGFIVCRLGDDLFIVDQHATDEKYNFEDLQRTTVLQNQRLVVPQPLELTAVNE 746
Query: 273 CILKDNLPVFYKNGFEFSFD--SSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNST 330
+L DNL VF NGF+F D ++ V L + P S+N G+EDI+EL+FMLQ T
Sbjct: 747 MVLIDNLDVFEMNGFKFEIDGAAATTRKVRLIAKPFSRNWEFGKEDIDELIFMLQDAPGT 806
Query: 331 EHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
CRPSR+RAMFASRACRKSVMIG ALSV EM LVR+MG I+QPW
Sbjct: 807 -VCRPSRVRAMFASRACRKSVMIGTALSVREMERLVRHMGEIEQPW 851
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 44/61 (72%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
KL+N+ YH++N HQ PF+ LN+++ R VDVN+TPDKR + M+ EK+++ V+ I ++
Sbjct: 313 KLINDAYHRYNVHQQPFVYLNLKLDRSEVDVNLTPDKRMVLMNKEKIIMLAVRKSIKKTF 372
Query: 62 A 62
Sbjct: 373 G 373
>gi|292619425|ref|XP_693648.4| PREDICTED: mismatch repair endonuclease PMS2 [Danio rerio]
Length = 849
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 146/312 (46%), Positives = 190/312 (60%), Gaps = 26/312 (8%)
Query: 82 SDVDMEKIQRSNSEEV-EHETIP-VPSEDNSN--FSHEANLQQSPETVEPDTPDETIEVI 137
+DV E + + E + +ET+P SE + N FS EA + E + P + V
Sbjct: 526 TDVKAEIVDKPMDENLWSYETLPETKSEQHQNRIFSPEAKRARR----EDEPPAQNCLV- 580
Query: 138 DDMPRLQGSYRQSTPV-----TLSLDIIQDQLKARY----ARRTVQAQDRCVENRFHANI 188
D S + PV T+ L Q +L R A+RT + RF A I
Sbjct: 581 -DFKSRNASLKFDAPVNIKKKTVLLPFSQQELSKRMQRLQAQRTKSNEQEPKYRRFRAKI 639
Query: 189 DPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETL 248
+P +N+ AE EL + I K MF++M+I+GQFNLGFII K SDLFIIDQHATDEKYNFE L
Sbjct: 640 NPGENQTAEDELKKEISKDMFKEMEIIGQFNLGFIITKIKSDLFIIDQHATDEKYNFEML 699
Query: 249 QKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVL----LTSL 304
Q+ T++K Q+L+VPQ+LHL I++ +L +NL +F KNGF+F D +D V+ L SL
Sbjct: 700 QQNTVLKGQRLIVPQSLHLPAISETVLMENLEIFRKNGFDFLID--EDAQVMDRVKLVSL 757
Query: 305 PMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTG 364
P SKN T G DIEEL+FML + CRPSR+R MFASRACRKSVM+G AL+ EM
Sbjct: 758 PTSKNWTFGPNDIEELIFMLSDSPGI-MCRPSRVRQMFASRACRKSVMVGTALNTSEMKK 816
Query: 365 LVRNMGRIDQPW 376
LV +MG I+QPW
Sbjct: 817 LVLHMGEIEQPW 828
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 46/63 (73%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
KLVNEVYH +N HQYPF+ LNI ++ D VDVNVTPDKRQI + EKLLLA +K + +
Sbjct: 301 KLVNEVYHMYNRHQYPFVALNIAVASDCVDVNVTPDKRQILLQEEKLLLAILKSSLIAMF 360
Query: 62 AIG 64
G
Sbjct: 361 ETG 363
>gi|327285948|ref|XP_003227693.1| PREDICTED: mismatch repair endonuclease PMS2-like [Anolis
carolinensis]
Length = 842
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 120/231 (51%), Positives = 162/231 (70%), Gaps = 4/231 (1%)
Query: 148 RQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKS 207
R++ P+ SL +++D++K ++ A D +F A I+P +NK AE EL + I K
Sbjct: 593 RRTVPLEFSLSVLRDRVKKLMGQQEKTA-DTLHYRKFRAKINPGENKTAEDELRKEISKE 651
Query: 208 MFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHL 267
MF KM I+GQFNLGFI+ K +SDLFI+DQHA+DEKYNFE LQ+ T+++ Q+L+ PQNL+L
Sbjct: 652 MFAKMDIIGQFNLGFIVAKLNSDLFIVDQHASDEKYNFEQLQEHTVLQGQRLISPQNLNL 711
Query: 268 TKINQCILKDNLPVFYKNGFEFSF--DSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQ 325
T IN+ +L +NL +F KNGF+F D+ V L SLPMSKN T G +DI+EL+FML
Sbjct: 712 TAINESVLIENLEIFRKNGFDFVINEDAPVTQRVQLISLPMSKNWTFGPQDIDELIFMLS 771
Query: 326 HTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+ CRPSR+R MFASRACRKSVM+G AL+ EM L+ +MG I+ PW
Sbjct: 772 DSPGV-MCRPSRVRQMFASRACRKSVMVGTALNAKEMKKLITHMGEIEHPW 821
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 52/73 (71%), Gaps = 7/73 (9%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
KLVNEVYH +N HQYPF++LNI +SVD+NVTPDKRQIF+ EKLLLA VK + +
Sbjct: 299 KLVNEVYHMYNRHQYPFVVLNICADSESVDINVTPDKRQIFLQEEKLLLAIVKTSMMGMF 358
Query: 62 AIGFTVDGNNMNQ 74
GN++N+
Sbjct: 359 -------GNDVNK 364
>gi|291233099|ref|XP_002736491.1| PREDICTED: PMS2 postmeiotic segregation increased 2-like, partial
[Saccoglossus kowalevskii]
Length = 532
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 126/231 (54%), Positives = 156/231 (67%), Gaps = 7/231 (3%)
Query: 148 RQSTPVTLSLDIIQDQLK-ARYARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKK 206
R V SL I ++LK + A+ + R F A I P NK AE EL R I K
Sbjct: 287 RHEVKVPFSLPGIANRLKQCQGAKSDFKTAGR----SFRAEIKPQDNKSAEEELQRKISK 342
Query: 207 SMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLH 266
MF+ M+++GQFNLGFIIVK DLFI+DQHATDEKYNFE LQK T I+SQKL+ PQ L
Sbjct: 343 EMFKDMEVIGQFNLGFIIVKIKEDLFIVDQHATDEKYNFEMLQKHTNIQSQKLIQPQKLE 402
Query: 267 LTKINQCILKDNLPVFYKNGFEFSFDSSDDG-NVLLTSLPMSKNTTLGREDIEELLFMLQ 325
LT +N+ +L DNL +F KNGF+F + D G V L SLPMSKN T G++DI+EL+FML
Sbjct: 403 LTPVNESVLMDNLEIFQKNGFDFITEEGDTGKKVKLISLPMSKNWTFGKQDIDELIFMLN 462
Query: 326 HTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
T CRPSR+R MFASRACR+S+M+G AL+ EM L+ +MG I+QPW
Sbjct: 463 DAPGT-MCRPSRVRQMFASRACRQSIMVGTALNKTEMKKLICHMGEIEQPW 512
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 47/61 (77%)
Query: 1 MKLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K++NEVYH +N HQYPF++L+I +S++SVDVN+TPDKRQI + EK LLA VK +
Sbjct: 68 FKVLNEVYHMYNRHQYPFVVLDITLSKESVDVNITPDKRQILVAEEKTLLAVVKSSLIKL 127
Query: 61 Y 61
Y
Sbjct: 128 Y 128
>gi|195384627|ref|XP_002051016.1| GJ19872 [Drosophila virilis]
gi|194145813|gb|EDW62209.1| GJ19872 [Drosophila virilis]
Length = 886
Score = 241 bits (615), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 117/197 (59%), Positives = 144/197 (73%), Gaps = 3/197 (1%)
Query: 183 RFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEK 242
RF + I+PS+N+ AE+EL + I K+ FE+M+I+GQFNLGFIIVK D DLFI+DQHA DEK
Sbjct: 655 RFKSEINPSQNQNAEAELQKEITKADFERMQIIGQFNLGFIIVKLDDDLFIVDQHAADEK 714
Query: 243 YNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSF--DSSDDGNVL 300
YNFETLQ+ T ++ Q+L VPQ L LT +N+ IL+D+LPVF KNGF+F D+ V
Sbjct: 715 YNFETLQRNTQLEHQRLTVPQTLELTAVNEMILQDHLPVFEKNGFKFEINADAPATKKVR 774
Query: 301 LTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRAL-SV 359
L P SKN G+EDI+EL+FMLQ CRPSRIRAMFASRACRKSVMIG+AL
Sbjct: 775 LLGKPFSKNWEFGKEDIDELIFMLQDAPEGTICRPSRIRAMFASRACRKSVMIGKALHRT 834
Query: 360 GEMTGLVRNMGRIDQPW 376
M L+ MG I+QPW
Sbjct: 835 TTMRRLITQMGEIEQPW 851
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 46/61 (75%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K++N+VYH++N Q PFI LNI SR VDVN+TPDKRQ+ +++E++LL +K + D++
Sbjct: 330 KVMNDVYHRYNVQQQPFIYLNIVTSRAEVDVNLTPDKRQLLLNNERILLLALKKSLLDTF 389
Query: 62 A 62
Sbjct: 390 G 390
>gi|170063399|ref|XP_001867088.1| DNA mismatch repair protein pms1 [Culex quinquefasciatus]
gi|167881032|gb|EDS44415.1| DNA mismatch repair protein pms1 [Culex quinquefasciatus]
Length = 860
Score = 241 bits (614), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 114/197 (57%), Positives = 144/197 (73%), Gaps = 2/197 (1%)
Query: 183 RFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEK 242
+F I+P+ N+ AE EL I K F KM+I+GQFNLGFII + D+DLFIIDQHATDEK
Sbjct: 629 KFKCKINPNSNRAAEDELQMEITKEKFGKMEIIGQFNLGFIIARLDADLFIIDQHATDEK 688
Query: 243 YNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDD--GNVL 300
YNFE LQ+ T++++QKLVVPQ L LT +N+ IL D+L +F NGF+F D + +
Sbjct: 689 YNFEDLQRNTVLQNQKLVVPQPLELTAVNEMILMDSLEIFEMNGFQFEVDGGAEPTKKIK 748
Query: 301 LTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVG 360
L + P SKN G+EDI+EL+FMLQ CRPSR+R+MFASRACRKSVMIG+AL+V
Sbjct: 749 LVAKPFSKNWEFGKEDIDELIFMLQDAVPNTVCRPSRVRSMFASRACRKSVMIGKALTVA 808
Query: 361 EMTGLVRNMGRIDQPWV 377
EM LV +MG I+QPWV
Sbjct: 809 EMRRLVTHMGEIEQPWV 825
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 36/46 (78%)
Query: 1 MKLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHE 46
+KLVNE YH++N PF+ LN++M R VDVN+TPDKRQ+ M++E
Sbjct: 321 IKLVNETYHKYNASHTPFVFLNLKMDRADVDVNLTPDKRQLLMNNE 366
>gi|195028197|ref|XP_001986963.1| GH21651 [Drosophila grimshawi]
gi|193902963|gb|EDW01830.1| GH21651 [Drosophila grimshawi]
Length = 903
Score = 240 bits (613), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 117/197 (59%), Positives = 144/197 (73%), Gaps = 3/197 (1%)
Query: 183 RFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEK 242
RF + I+P++N+ AE+EL + I K+ FE+M+I+GQFNLGFIIVK D DLFI+DQHA DEK
Sbjct: 665 RFKSEINPNQNQNAEAELQKEITKADFERMQIIGQFNLGFIIVKLDDDLFIVDQHAADEK 724
Query: 243 YNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSF--DSSDDGNVL 300
YNFETLQ+TT ++ Q+L VPQ L LT +N+ IL+D LPVF KNGF+F D+ V
Sbjct: 725 YNFETLQRTTQLEHQRLTVPQTLELTAVNEMILQDYLPVFEKNGFKFEINADAPATQKVR 784
Query: 301 LTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRAL-SV 359
L P SKN G+EDI+EL+FMLQ CRPSRIRAMFASRACRKSVMIG+AL
Sbjct: 785 LLGKPYSKNWEFGKEDIDELIFMLQDAPEGTICRPSRIRAMFASRACRKSVMIGKALHRS 844
Query: 360 GEMTGLVRNMGRIDQPW 376
M L+ MG I+QPW
Sbjct: 845 TTMRRLITQMGEIEQPW 861
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 47/61 (77%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K++N+VYH++N Q PFI LNI +RD VDVN+TPDKRQ+ +++EK+LL +K + D++
Sbjct: 330 KIMNDVYHRYNVQQQPFIYLNIVTARDEVDVNLTPDKRQLLLNNEKILLLALKKSLLDTF 389
Query: 62 A 62
Sbjct: 390 G 390
>gi|195120550|ref|XP_002004787.1| GI20105 [Drosophila mojavensis]
gi|193909855|gb|EDW08722.1| GI20105 [Drosophila mojavensis]
Length = 489
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 113/198 (57%), Positives = 145/198 (73%), Gaps = 3/198 (1%)
Query: 183 RFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEK 242
RF + I+P++NK AE+EL + I K+ F++M+I+GQFNLGFIIVK + DLFI+DQHA DEK
Sbjct: 290 RFKSEINPNQNKNAEAELQKEITKADFKRMQIIGQFNLGFIIVKLEDDLFIVDQHAADEK 349
Query: 243 YNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDG--NVL 300
YNFE LQ+ T ++ Q+L VPQ L LT +N+ IL+D+LPVF KNGF+F D+ +
Sbjct: 350 YNFEMLQRNTQLEHQRLTVPQTLELTAVNEMILQDHLPVFEKNGFKFEIDAEAPPTRKIR 409
Query: 301 LTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALS-V 359
L P SKN G+EDI+EL+FMLQ CRPSRIRAMFASRACRKSVM+G+AL+
Sbjct: 410 LLGKPFSKNWEFGKEDIDELIFMLQDAPEGTVCRPSRIRAMFASRACRKSVMVGKALNRT 469
Query: 360 GEMTGLVRNMGRIDQPWV 377
M L+ MG I+QPWV
Sbjct: 470 TTMRRLITQMGEIEQPWV 487
>gi|348502122|ref|XP_003438618.1| PREDICTED: mismatch repair endonuclease PMS2 [Oreochromis
niloticus]
Length = 853
Score = 239 bits (610), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 122/221 (55%), Positives = 153/221 (69%), Gaps = 14/221 (6%)
Query: 160 IQDQLKARYARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFN 219
+QDQ K R A + + RF A I+P +N AE EL + I K MF++M+I+GQFN
Sbjct: 622 LQDQQKQR-------AGEELLYRRFRAKINPGENHSAEEELKKEISKEMFKEMEIIGQFN 674
Query: 220 LGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNL 279
LGFII K SDLF+IDQHATDEKYNFE LQ+ T+++ QKL+VPQ LHLT +++ +L +N+
Sbjct: 675 LGFIITKLKSDLFMIDQHATDEKYNFEMLQQHTILQGQKLIVPQKLHLTAVSENVLIENI 734
Query: 280 PVFYKNGFEFSFDSSDDGNVL----LTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRP 335
+F NGFEF D +D V+ L SLP SKN T G DIEEL+FML + CRP
Sbjct: 735 EIFRNNGFEFLID--EDAQVMERVKLVSLPTSKNWTFGPSDIEELIFMLSDSPGV-MCRP 791
Query: 336 SRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
SR+R MFASRACRKSVMIG AL+V EM LV +MG I+ PW
Sbjct: 792 SRVRQMFASRACRKSVMIGTALNVNEMKKLVVHMGEIEHPW 832
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 47/63 (74%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
KLVNEVYH +N HQYPF+ LNI ++ + VDVNVTPDKRQIF+ EKLLLA +K + Y
Sbjct: 301 KLVNEVYHMYNRHQYPFVALNIAVASECVDVNVTPDKRQIFLQEEKLLLAILKTSLIAMY 360
Query: 62 AIG 64
G
Sbjct: 361 EGG 363
>gi|195455398|ref|XP_002074706.1| GK23208 [Drosophila willistoni]
gi|194170791|gb|EDW85692.1| GK23208 [Drosophila willistoni]
Length = 875
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 123/231 (53%), Positives = 159/231 (68%), Gaps = 4/231 (1%)
Query: 150 STPVTLSLDIIQDQLKARYARRTV-QAQDRCVENRFHANIDPSKNKEAESELNRVIKKSM 208
S + SL+ I +LKA+ R++ +A+ + RF I+P++N +AE+EL + I K
Sbjct: 614 SGELCTSLEEIAARLKAQELRQSTNRARAKLQRLRFKTEINPTQNVKAEAELQKEIAKED 673
Query: 209 FEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLT 268
F +M+I+GQFNLGFIIVK + DLFI+DQHA DEKYNFETLQK T ++ Q+L VPQ L LT
Sbjct: 674 FARMEIIGQFNLGFIIVKLEDDLFIVDQHAADEKYNFETLQKCTQLEYQRLAVPQPLELT 733
Query: 269 KINQCILKDNLPVFYKNGFEFSFDSSDDGN--VLLTSLPMSKNTTLGREDIEELLFMLQH 326
IN+ +L D+LPVF KNGF+F D+ V L P S+N G+EDI+EL+FMLQ
Sbjct: 734 AINEMVLMDHLPVFEKNGFKFQIDAEAPATKKVRLLGKPYSRNWEFGKEDIDELIFMLQD 793
Query: 327 TNSTEHCRPSRIRAMFASRACRKSVMIGRALS-VGEMTGLVRNMGRIDQPW 376
CRPSRIRAMFASRACRKSVMIG+AL+ M L+ MG I+QPW
Sbjct: 794 APEGTICRPSRIRAMFASRACRKSVMIGKALNRKTTMKRLITQMGEIEQPW 844
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 46/61 (75%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K++N+VYH+FN Q PFI LN+ +R VDVN+TPDKRQ+ +++EK+L+ +K + +++
Sbjct: 324 KVMNDVYHRFNAQQQPFIYLNVVTARADVDVNLTPDKRQLLLNNEKILILALKKSLLNTF 383
Query: 62 A 62
Sbjct: 384 G 384
>gi|345490790|ref|XP_003426459.1| PREDICTED: mismatch repair endonuclease PMS2 [Nasonia vitripennis]
Length = 683
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 139/383 (36%), Positives = 224/383 (58%), Gaps = 28/383 (7%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
+L+N +YH++NN QYPF+ L+I++ + DVNVTPDKR I E++LLAT+K + ++
Sbjct: 301 RLINHIYHKYNNKQYPFVYLDIKLKQSCADVNVTPDKRTILFTQEQILLATIKSNFERTW 360
Query: 62 AIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQS 121
+ NM S +++ + +R+ S+ E+ PS+ + + +Q
Sbjct: 361 S--------NMQGSFTVKTLEELNFKSYKRNISDSPENSP---PSKKQTIRISNNSEKQK 409
Query: 122 PETVEPDTPDETIEVIDDMPRLQGSYRQSTPVT-LSLDI-IQDQLKARYARRTVQAQDRC 179
P ++ D + + D + +L S + + ++ DI I+D ++ ++
Sbjct: 410 PVSIMEDIKAK-LSKSDKLSKLNNSSKSKAETSAVNKDILIKDSIEKSKNKKEGGI---- 464
Query: 180 VENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHAT 239
++ A +D +K+ + E EL R + K FEKM+I+GQFNLGFI+ DSD+FI+DQHA+
Sbjct: 465 ---KYRAKLD-AKSSDIEKELQRELTKESFEKMQIIGQFNLGFILTSLDSDIFIVDQHAS 520
Query: 240 DEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSF-DSSDDGN 298
DEKY FE L T +K+QKL++P+ L+ + +N+ IL +N +F +NGF F D D GN
Sbjct: 521 DEKYRFEKLSNETKLKTQKLILPKKLNFSVLNETILMENQRIFEENGFTFRIKDEGDPGN 580
Query: 299 -VLLTSLPMSKNTTLGREDIEELLFMLQHTN----STEHCRPSRIRAMFASRACRKSVMI 353
V LT +P+S EDIEEL+F+++ ST RP+R+R M ASRACR +VMI
Sbjct: 581 RVELTGMPVSYGWQFDLEDIEELIFIIREGGDDGTSTIIPRPTRVRQMLASRACRSAVMI 640
Query: 354 GRALSVGEMTGLVRNMGRIDQPW 376
G+AL+ +M L++ M ++ PW
Sbjct: 641 GKALNFTDMQRLLKQMSQMKNPW 663
>gi|322800065|gb|EFZ21171.1| hypothetical protein SINV_06397 [Solenopsis invicta]
Length = 672
Score = 238 bits (606), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 150/385 (38%), Positives = 217/385 (56%), Gaps = 43/385 (11%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
KLVN VYH++N QYPF+ NI++ R DVNVTPDKR IF+ E+L+LAT+K + +
Sbjct: 301 KLVNSVYHRYNIKQYPFVFFNIKLDRQCADVNVTPDKRTIFVTQERLILATLKFSLITKW 360
Query: 62 AIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQS 121
+ GN +++ ++++ ++R+ S H S LQ S
Sbjct: 361 D---KLQGNFTVKTL-----TELNF-GLKRTISPNHAH-------------SPAKRLQLS 398
Query: 122 PETV----EPDTPDET-IEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQ 176
P E DT +T I+ S ++ T V +++ I+ + K + A
Sbjct: 399 PSVSHIVKENDTTIQTNIK----------SLKKPTDVNMAISIVTIKEKLNEKQNIATAL 448
Query: 177 DRCVENRFHANIDPSKNK-EAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIID 235
++ R + N+ EAE EL + + K FEKM+I+GQFNLGFII + + DLFIID
Sbjct: 449 SSTIK-RIKYRVQMEGNQSEAEKELQKELTKDSFEKMEIIGQFNLGFIIARLEDDLFIID 507
Query: 236 QHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSD 295
QHATDEK+ FE L T +K+QKL+VP+ L+ + +N+ IL DNL F NGF F+ +
Sbjct: 508 QHATDEKFRFEKLSNETKLKTQKLIVPKLLNFSALNETILIDNLQTFENNGFTFNINEQA 567
Query: 296 D--GNVLLTSLPMSKNTTLGREDIEELLFMLQHT-NSTEHC-RPSRIRAMFASRACRKSV 351
+ V L +P+S N G+EDIEEL+F+++ N +H RPSR+R M ASRACR +V
Sbjct: 568 EPGKKVELIGMPVSGNWQFGQEDIEELIFLIREAGNENKHMYRPSRVRQMLASRACRSAV 627
Query: 352 MIGRALSVGEMTGLVRNMGRIDQPW 376
MIG AL+ EM LV M ++ PW
Sbjct: 628 MIGTALNTSEMQRLVTQMTQMYNPW 652
>gi|260801094|ref|XP_002595431.1| hypothetical protein BRAFLDRAFT_69263 [Branchiostoma floridae]
gi|229280677|gb|EEN51443.1| hypothetical protein BRAFLDRAFT_69263 [Branchiostoma floridae]
Length = 219
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 116/195 (59%), Positives = 142/195 (72%), Gaps = 3/195 (1%)
Query: 184 FHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKY 243
F A I PS N+ AE EL R I K F +M+I+GQFNLGFII + DLFIIDQHATDEKY
Sbjct: 6 FRAKISPSDNQAAEDELRREISKDKFTQMEILGQFNLGFIIARLGGDLFIIDQHATDEKY 65
Query: 244 NFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSF--DSSDDGNVLL 301
NFE LQ+ T+++ Q+L+ PQ+LHLT N+ IL DN+ +F KNGFEF+ D+ V L
Sbjct: 66 NFEMLQRNTVLQGQRLIQPQSLHLTAANESILMDNMDIFRKNGFEFTIQEDAPCTERVKL 125
Query: 302 TSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGE 361
S+P+SKN T G+EDIEEL+FML CRPSR+R MFASRACRKSVMIG AL+ GE
Sbjct: 126 VSMPVSKNWTFGKEDIEELIFMLSDAPGV-MCRPSRVRQMFASRACRKSVMIGTALNRGE 184
Query: 362 MTGLVRNMGRIDQPW 376
M L+ +MG I+QPW
Sbjct: 185 MQQLLTHMGEIEQPW 199
>gi|405973456|gb|EKC38171.1| Mismatch repair endonuclease PMS2 [Crassostrea gigas]
Length = 794
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 119/204 (58%), Positives = 149/204 (73%), Gaps = 5/204 (2%)
Query: 175 AQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFII 234
+D C +F A I P++N+ AE EL+R I KSMF++M+I+GQFNLGFII K DLFI+
Sbjct: 574 TEDGC--RKFRAVISPTENQSAEEELSREISKSMFKEMEILGQFNLGFIIAKLKDDLFIV 631
Query: 235 DQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSS 294
DQHATDEKYNFE LQ+ T+I+ QKL+ PQ+L LT N+ L DNL VF KNGF+F D +
Sbjct: 632 DQHATDEKYNFEMLQQHTVIQCQKLIQPQSLELTASNEITLIDNLEVFRKNGFDFVIDEN 691
Query: 295 DD--GNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVM 352
V LTS+P+S+N T G+EDIEEL+FML + + CRPSR+R MFASRACRKS+M
Sbjct: 692 APPMQRVKLTSIPVSRNWTFGKEDIEELIFMLSDSPNV-MCRPSRVRQMFASRACRKSIM 750
Query: 353 IGRALSVGEMTGLVRNMGRIDQPW 376
IG AL EM LV +MG I+QPW
Sbjct: 751 IGTALKKSEMKKLVCHMGEIEQPW 774
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/30 (76%), Positives = 28/30 (93%)
Query: 29 SVDVNVTPDKRQIFMDHEKLLLATVKVHIT 58
SVDVNVTPDKRQIFM++EK+LLAT+K +T
Sbjct: 273 SVDVNVTPDKRQIFMENEKILLATIKNMMT 302
>gi|380026791|ref|XP_003697126.1| PREDICTED: LOW QUALITY PROTEIN: mismatch repair endonuclease
PMS2-like [Apis florea]
Length = 689
Score = 233 bits (595), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 133/382 (34%), Positives = 223/382 (58%), Gaps = 19/382 (4%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
KL+N++YH++NN QYPFI LN+++++ S D+NVTP+KR IF E L+LAT+K +T +
Sbjct: 301 KLINQIYHKYNNKQYPFIFLNLKLNKYSTDINVTPNKRTIFCTQENLILATLKYSLTSKW 360
Query: 62 AIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQS 121
+ + ++ +P S ++ I+R+ S E +I + N + + ++Q+
Sbjct: 361 --------DKLQGNLTVNPLSKLNF-GIKRTISPTNEDRSIKRLHKLNEISNTKYTIRQN 411
Query: 122 PETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTV-QAQDRCV 180
++ D ++ IE + + + + + + I+ + K + + + +
Sbjct: 412 ---IQSDNENKIIEYDNSQNNISNETKILNSIEMPISILTIKQKLQEKQNILPKYVTSNT 468
Query: 181 ENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATD 240
+F A ++ ++N +AE+EL + K F KM+I+GQFNLGFII + DLFIIDQHA+D
Sbjct: 469 TIKFKAKMEANENSKAENELKTQLTKDSFFKMEIIGQFNLGFIITRLKEDLFIIDQHASD 528
Query: 241 EKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFD--SSDDGN 298
EKY FE L T +K+QKL++P+ L+++ +N+ IL +N F NGF + + +
Sbjct: 529 EKYRFEKLNNETQLKTQKLIIPKFLNISAVNETILIENQKTFEDNGFFLNINILAESGHR 588
Query: 299 VLLTSLPMSKNTTLGREDIEELLFMLQHTN----STEHCRPSRIRAMFASRACRKSVMIG 354
V LT +P+S G+EDIEEL+F+++ + RPSR+R M ASRACR +VMIG
Sbjct: 589 VQLTGIPVSGYWQFGQEDIEELIFLIRESGIENXEKSIFRPSRVRQMLASRACRGAVMIG 648
Query: 355 RALSVGEMTGLVRNMGRIDQPW 376
+AL+ +M L+ M ++ PW
Sbjct: 649 KALNNSDMQKLITQMAQMKNPW 670
>gi|17863002|gb|AAL39978.1| SD07911p [Drosophila melanogaster]
Length = 895
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 126/247 (51%), Positives = 161/247 (65%), Gaps = 4/247 (1%)
Query: 134 IEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKA-RYARRTVQAQDRCVENRFHANIDPSK 192
IE ++M S S +T SL+ I LKA +R + + + RF I+P++
Sbjct: 618 IEFDEEMEEGLPSNFSSGEITTSLEEIASSLKAHEQQQRDRRTRTKLQRLRFKTEINPNQ 677
Query: 193 NKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTT 252
N AE+EL R I K F +M+I+GQFNLGFIIVK + DLFI+DQHATDEKYNFETLQ+TT
Sbjct: 678 NTSAEAELQREIDKEDFARMEIIGQFNLGFIIVKLEDDLFIVDQHATDEKYNFETLQRTT 737
Query: 253 LIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFD--SSDDGNVLLTSLPMSKNT 310
++ Q+L VPQNL LT +N+ +L +++ VF KNGF+F D + V L P SK
Sbjct: 738 QLEYQRLAVPQNLELTAVNEMVLLNHIDVFEKNGFKFEVDHEAPATKKVRLLGKPHSKRW 797
Query: 311 TLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVG-EMTGLVRNM 369
G+EDI+EL+FMLQ CRPSR+RAMFASRACRKSVMIG ALS M L+ M
Sbjct: 798 EFGKEDIDELIFMLQDAPEGTICRPSRVRAMFASRACRKSVMIGTALSRNTTMKRLITQM 857
Query: 370 GRIDQPW 376
G I+QPW
Sbjct: 858 GEIEQPW 864
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 68/117 (58%), Gaps = 8/117 (6%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K++NEVYH++N Q PFI LNI +R VDVN+TPDKRQ+ +++E++LL +K + D++
Sbjct: 336 KVMNEVYHRYNVQQQPFIYLNIITARSDVDVNLTPDKRQLLINNERILLLALKKSLLDTF 395
Query: 62 A---IGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIP---VPSEDNSNF 112
F + + +E P ++ K + +S+E +HE + VP+ F
Sbjct: 396 GQTPATFQMQNTTIVSMLE--PKTNSGKTKFPKESSKEDQHEEVSEEDVPTTSTQRF 450
>gi|344289677|ref|XP_003416568.1| PREDICTED: mismatch repair endonuclease PMS2 [Loxodonta africana]
Length = 870
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 115/227 (50%), Positives = 158/227 (69%), Gaps = 4/227 (1%)
Query: 152 PVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEK 211
P+ S+ + ++K + ++ Q +D+ RF A I P +N+ AE EL + I K+MF +
Sbjct: 625 PLDFSMTSLAKRIKQLH-QQGQQREDKQNYRRFRAKICPGENQAAEDELRKEISKTMFAE 683
Query: 212 MKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKIN 271
M+I+GQFNLGFII K ++D+FI+DQHATDEKYNFE LQ+ T+++ QKL++PQ L+LT +N
Sbjct: 684 MEIIGQFNLGFIITKLNADIFIVDQHATDEKYNFEMLQQHTVLQGQKLIIPQTLNLTAVN 743
Query: 272 QCILKDNLPVFYKNGFEFSF--DSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNS 329
+ +L +NL +F KNGF+F D+ V L SLP SKN T G +DI+EL+FML
Sbjct: 744 EAVLIENLEIFRKNGFDFLIDEDAPVTERVKLISLPTSKNWTFGPQDIDELIFMLSDCPG 803
Query: 330 TEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
CRPSR+R MFASRACRKSVMIG AL+ EM L+ +MG +D PW
Sbjct: 804 V-MCRPSRVRQMFASRACRKSVMIGTALNTSEMKKLITHMGEMDHPW 849
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 69/109 (63%), Gaps = 10/109 (9%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
+LVNEVYH +N HQYPF++LNI + + VD+NVTPDKRQI + EKLLLA +K + +
Sbjct: 304 RLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLVGMF 363
Query: 62 AIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNS 110
DG+ ++ Q P +++ K+ +++S E+E P+P + S
Sbjct: 364 ------DGDVNKLNVSQQPLLNIE-GKVVKTHSVEMEK---PLPDKQES 402
>gi|431918187|gb|ELK17415.1| Mismatch repair endonuclease PMS2 [Pteropus alecto]
Length = 946
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 119/227 (52%), Positives = 153/227 (67%), Gaps = 6/227 (2%)
Query: 155 LSLDIIQDQLKARYARRTVQAQDRCVEN---RFHANIDPSKNKEAESELNRVIKKSMFEK 211
+ LD L R + Q Q R E +F A I P +N+ AE EL + I K+MF +
Sbjct: 700 VPLDFSMSSLVKRIKQLHHQEQQRESEQNYRKFRAKICPGENQAAEDELRKEISKTMFAE 759
Query: 212 MKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKIN 271
M+I+GQFNLGFII K D+D+FI+DQHATDEKYNFE LQ+ T+++ Q+L+ PQ L+LT +N
Sbjct: 760 MEIIGQFNLGFIITKLDADIFIVDQHATDEKYNFEMLQQHTVLQGQRLIAPQILNLTAVN 819
Query: 272 QCILKDNLPVFYKNGFEFSFDSSD--DGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNS 329
+ IL +NL +F KNGF+F D S L SLP SKN T G +DI+EL+FML +
Sbjct: 820 EAILIENLEIFRKNGFDFIIDESAPVTERAKLVSLPTSKNWTFGPQDIDELIFMLSDSPG 879
Query: 330 TEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
CRPSR+R MFASRACRKSVMIG AL+ GEM L+ +MG +D PW
Sbjct: 880 V-MCRPSRVRQMFASRACRKSVMIGTALNTGEMKKLITHMGEMDHPW 925
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 45/60 (75%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
+LVNEVYH +N HQYPF++LNI + + VD+NVTPDKRQI + EKLLLA +K + +
Sbjct: 386 RLVNEVYHTYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAILKTSLIGMF 445
>gi|338712534|ref|XP_001494013.2| PREDICTED: mismatch repair endonuclease PMS2 [Equus caballus]
Length = 868
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 117/230 (50%), Positives = 154/230 (66%), Gaps = 10/230 (4%)
Query: 152 PVTLSLDIIQDQLKARYARRTVQAQDRCVEN---RFHANIDPSKNKEAESELNRVIKKSM 208
P+ S+ + Q+K R Q Q R E RF A I P +N+ AE EL + I K+M
Sbjct: 623 PLDFSMSSLAKQIK----RLHHQEQKRAGEQNYRRFRAKICPGENQAAEDELRKEISKTM 678
Query: 209 FEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLT 268
F +M+I+GQFNLGFII K D+D+FI+DQHATDEKYNFE LQ+ T+++ Q+L+ PQ L+LT
Sbjct: 679 FAEMEIIGQFNLGFIITKLDADIFIVDQHATDEKYNFEMLQQHTVLQGQRLIAPQTLNLT 738
Query: 269 KINQCILKDNLPVFYKNGFEFSFDSSD--DGNVLLTSLPMSKNTTLGREDIEELLFMLQH 326
+N+ +L +NL +F KNGF+F D L SLP SKN T G +D++EL+FML
Sbjct: 739 AVNEAVLIENLEIFRKNGFDFVIDEGAPVTERAKLISLPTSKNWTFGPQDVDELIFMLSD 798
Query: 327 TNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+ CRPSR+R MFASRACRKSVMIG AL+ EM L+ +MG +D PW
Sbjct: 799 SPGV-MCRPSRVRQMFASRACRKSVMIGTALNASEMRKLITHMGEMDHPW 847
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 66/105 (62%), Gaps = 12/105 (11%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
+LVNEVYH +N HQYPF++LN+ + + VD+NVTPDKRQI + EKLLLA +K +
Sbjct: 304 RLVNEVYHMYNRHQYPFVVLNVSVDSECVDINVTPDKRQILLQEEKLLLAVLKTSL---- 359
Query: 62 AIG-FTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVP 105
IG F + N +N + Q P D + I + +S EVE P+P
Sbjct: 360 -IGMFDSEVNKLN--VNQQPLLDTEGNLI-KIHSAEVEQ---PLP 397
>gi|17136970|ref|NP_477023.1| Pms2 [Drosophila melanogaster]
gi|7303075|gb|AAF58142.1| Pms2 [Drosophila melanogaster]
Length = 899
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 126/247 (51%), Positives = 161/247 (65%), Gaps = 4/247 (1%)
Query: 134 IEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKA-RYARRTVQAQDRCVENRFHANIDPSK 192
IE ++M S S +T SL+ I LKA +R + + + RF I+P++
Sbjct: 622 IEFDEEMEEGLPSNFSSGEITTSLEEIASSLKAHEQQQRDRRTRTKLQRLRFKTEINPNQ 681
Query: 193 NKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTT 252
N AE+EL R I K F +M+I+GQFNLGFIIVK + DLFI+DQHATDEKYNFETLQ+TT
Sbjct: 682 NTSAEAELQREIDKEDFARMEIIGQFNLGFIIVKLEDDLFIVDQHATDEKYNFETLQRTT 741
Query: 253 LIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFD--SSDDGNVLLTSLPMSKNT 310
++ Q+L VPQNL LT +N+ +L +++ VF KNGF+F D + V L P SK
Sbjct: 742 QLEYQRLAVPQNLELTAVNEMVLLNHIDVFEKNGFKFEVDHEAPATKKVRLLGKPHSKRW 801
Query: 311 TLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVG-EMTGLVRNM 369
G+EDI+EL+FMLQ CRPSR+RAMFASRACRKSVMIG ALS M L+ M
Sbjct: 802 EFGKEDIDELIFMLQDAPEGTICRPSRVRAMFASRACRKSVMIGTALSRNTTMRRLITQM 861
Query: 370 GRIDQPW 376
G I+QPW
Sbjct: 862 GEIEQPW 868
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 68/117 (58%), Gaps = 8/117 (6%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K++NEVYH++N Q PFI LNI +R VDVN+TPDKRQ+ +++E++LL +K + D++
Sbjct: 336 KVMNEVYHRYNVQQQPFIYLNIITARSDVDVNLTPDKRQLLINNERILLLALKKSLLDTF 395
Query: 62 A---IGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIP---VPSEDNSNF 112
F + + +E P ++ K + +S++ +HE + VP+ F
Sbjct: 396 GQTPATFQMQNTTIVSMLE--PKTNSGKTKFPKESSKDDQHEEVSEEDVPTTSTQRF 450
>gi|195488586|ref|XP_002092377.1| GE14157 [Drosophila yakuba]
gi|194178478|gb|EDW92089.1| GE14157 [Drosophila yakuba]
Length = 899
Score = 231 bits (590), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 126/246 (51%), Positives = 163/246 (66%), Gaps = 8/246 (3%)
Query: 135 EVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKA-RYARRTVQAQDRCVENRFHANIDPSKN 193
EV + MP S S +T SL+ I+ LKA +R +A+ + RF I+P++N
Sbjct: 627 EVEEGMP----SNFSSGEITTSLEEIETSLKAHEQQQRDRRARAKLQRLRFKTEINPNQN 682
Query: 194 KEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL 253
AE+EL R I K F +M+I+GQFNLGFIIVK + DLFI+DQHATDEKYNFETLQ+TT
Sbjct: 683 HSAEAELQREIDKEDFARMEIIGQFNLGFIIVKLEDDLFIVDQHATDEKYNFETLQRTTQ 742
Query: 254 IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFD--SSDDGNVLLTSLPMSKNTT 311
++ Q+L VPQ+L LT +N+ +L +++ VF KNGF+F D + V L P SK
Sbjct: 743 LEYQRLTVPQSLELTAVNEMVLLNHIDVFEKNGFKFQVDHEAPATKKVRLLGKPHSKRWE 802
Query: 312 LGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVG-EMTGLVRNMG 370
G+EDI+EL+FMLQ CRPSR+RAMFASRACRKSVMIG AL+ M L+ MG
Sbjct: 803 FGKEDIDELIFMLQDAPEGTICRPSRVRAMFASRACRKSVMIGTALNRNTTMRRLITQMG 862
Query: 371 RIDQPW 376
I+QPW
Sbjct: 863 EIEQPW 868
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 46/61 (75%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K++NEVYH++N Q PFI LNI +R VDVN+TPDKRQ+ +++E++LL +K + D++
Sbjct: 336 KVMNEVYHRYNVQQQPFIYLNIVTARSDVDVNLTPDKRQLLINNERILLLALKKSLLDTF 395
Query: 62 A 62
Sbjct: 396 G 396
>gi|311250873|ref|XP_003124331.1| PREDICTED: mismatch repair endonuclease PMS2 [Sus scrofa]
Length = 852
Score = 231 bits (590), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 130/318 (40%), Positives = 177/318 (55%), Gaps = 23/318 (7%)
Query: 79 DPSSDVDMEKIQRSNSEEVEHETIPV-------------PSEDNSNFSHEANLQQSPETV 125
DP++ + + + E E P P N++ + ++ +
Sbjct: 517 DPAASAPEDGFSQEHVESCEEAPAPALGALDQEAGGLRRPQPPNASSPNPKRFKKEGVPL 576
Query: 126 EPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVEN--- 182
PD P E + + LD L R + Q Q R E
Sbjct: 577 NPDVPPEPVATQSVAAAEVDVAVDIEKKIVPLDFSMRSLAKRIKQLCRQEQQREGEQNYR 636
Query: 183 RFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEK 242
+F A I P +N+ AE EL + I K MF +M+I+GQFNLGFII K ++D+FI+DQHATDEK
Sbjct: 637 KFRAKICPGENQAAEDELRKEISKEMFAEMEIIGQFNLGFIITKLNADIFIVDQHATDEK 696
Query: 243 YNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVL-- 300
YNFE LQ+ T+++ Q+L+VPQ L+LT +N+ +L +NL +F KNGF+F D +D V
Sbjct: 697 YNFEMLQQHTVLQGQRLIVPQTLNLTAVNEAVLIENLDIFRKNGFDFVID--EDAPVTER 754
Query: 301 --LTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALS 358
L SLP SKN T G +DI+EL+FML + CRPSR+R MFASRACRKSVMIG AL+
Sbjct: 755 AKLISLPTSKNWTFGPQDIDELIFMLSDSPGV-MCRPSRVRQMFASRACRKSVMIGTALN 813
Query: 359 VGEMTGLVRNMGRIDQPW 376
EM LV +MG +D PW
Sbjct: 814 TSEMRRLVSHMGEMDHPW 831
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 62/95 (65%), Gaps = 8/95 (8%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
+LVNEVYH +N HQYPF++LNI + + VD+NVTPDKRQI + EKLLLA +K + D +
Sbjct: 304 RLVNEVYHLYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIDMF 363
Query: 62 AIGFTVDGNNMNQ-SMEQDPSSDVDMEKIQRSNSE 95
N++N+ S+ Q DV+ I+R +E
Sbjct: 364 -------DNDVNKISVRQQSLLDVEGNLIKRHPAE 391
>gi|3193224|gb|AAC19245.1| mutL homolog PMS2 [Drosophila melanogaster]
Length = 893
Score = 231 bits (588), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 126/247 (51%), Positives = 160/247 (64%), Gaps = 4/247 (1%)
Query: 134 IEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKA-RYARRTVQAQDRCVENRFHANIDPSK 192
IE ++M S S +T SL+ I LKA +R + + + RF I+P++
Sbjct: 616 IEFDEEMEEGLPSNFSSGEITTSLEEIASSLKAHEQQQRDRRTRTKLQRLRFKTEINPNQ 675
Query: 193 NKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTT 252
N AE+EL R I K F M+I+GQFNLGFIIVK + DLFI+DQHATDEKYNFETLQ+TT
Sbjct: 676 NTSAEAELRREIDKEDFAPMEIIGQFNLGFIIVKLEDDLFIVDQHATDEKYNFETLQRTT 735
Query: 253 LIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFD--SSDDGNVLLTSLPMSKNT 310
++ Q+L VPQNL LT +N+ +L +++ VF KNGF+F D + V L P SK
Sbjct: 736 QLEYQRLAVPQNLELTAVNEMVLLNHIDVFEKNGFKFEVDHEAPATKKVRLLGKPHSKRW 795
Query: 311 TLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVG-EMTGLVRNM 369
G+EDI+EL+FMLQ CRPSR+RAMFASRACRKSVMIG ALS M L+ M
Sbjct: 796 EFGKEDIDELIFMLQDAPEGTICRPSRVRAMFASRACRKSVMIGTALSRNTTMRRLITQM 855
Query: 370 GRIDQPW 376
G I+QPW
Sbjct: 856 GEIEQPW 862
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 68/117 (58%), Gaps = 8/117 (6%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K++NEVYH++N Q PFI LNI +R VDVN+TPDKRQ+ +++E++LL +K + D++
Sbjct: 334 KVMNEVYHRYNVQQQPFIYLNIITARSDVDVNLTPDKRQLLINNERILLLALKKSLLDTF 393
Query: 62 A---IGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIP---VPSEDNSNF 112
F + + +E P ++ K + +S+E +HE + VP+ F
Sbjct: 394 GQTPATFQMQNTTIVSMLE--PKTNSGKTKFPKESSKEDQHEEVSEEDVPTTSTQRF 448
>gi|291413733|ref|XP_002723121.1| PREDICTED: PMS2 postmeiotic segregation increased 2 [Oryctolagus
cuniculus]
Length = 867
Score = 231 bits (588), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 126/286 (44%), Positives = 173/286 (60%), Gaps = 12/286 (4%)
Query: 95 EEVEHETIP-VPSEDNSNFSHEANLQQSPETVE-PDTPDETIEVIDDMPRLQGSYRQSTP 152
E+ E +P P+E +S + +P + P P ++V +P+ + P
Sbjct: 569 EQCERAQVPPAPAELSSPSAKRRKKDGAPSGPDLPRGPASQLDVAVKVPK------RVVP 622
Query: 153 VTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKM 212
+ S+ + ++++ R R RF A I P N+ AE EL + I K+MF +M
Sbjct: 623 LDFSMSSLAERVR-RLLHREEPGGGEQNYRRFRAKICPGDNQAAEEELRKEISKAMFAEM 681
Query: 213 KIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQ 272
+I+GQFNLGFII K DLFI+DQHATDEKYNFE LQ+ T+++ Q+L+ PQ L+LT +N+
Sbjct: 682 EIIGQFNLGFIITKLHEDLFIVDQHATDEKYNFEMLQRHTVLQGQRLIAPQALNLTAVNE 741
Query: 273 CILKDNLPVFYKNGFEFSFDSSDD--GNVLLTSLPMSKNTTLGREDIEELLFMLQHTNST 330
IL +NL +F KNGF+F D + L SLP SKN T G +DI+EL+FML +
Sbjct: 742 AILLENLEIFRKNGFDFVIDEAAPVTQRAKLVSLPTSKNWTFGPQDIDELIFMLSDSPGV 801
Query: 331 EHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
CRPSR+R MFASRACRKSVMIG AL+ EM LV +MG +D PW
Sbjct: 802 -MCRPSRVRQMFASRACRKSVMIGTALNPSEMKQLVTHMGEMDHPW 846
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 68/110 (61%), Gaps = 12/110 (10%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
+LVNEVYH +N HQ+PF++LNI + + VD+NVTPDKRQI + EKLLLA +K +
Sbjct: 328 RLVNEVYHMYNRHQHPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAILKTSL---- 383
Query: 62 AIG-FTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNS 110
IG F D N +N S Q P DV+ I+ +E ET P+P + S
Sbjct: 384 -IGMFDSDVNKVNVS--QQPLLDVEGNLIKVHTAET---ET-PLPGKQGS 426
>gi|91079030|ref|XP_974934.1| PREDICTED: similar to DNA mismatch repair protein pms2 [Tribolium
castaneum]
Length = 840
Score = 230 bits (587), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 119/224 (53%), Positives = 158/224 (70%), Gaps = 7/224 (3%)
Query: 159 IIQDQ-LKARYARRTVQ---AQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKI 214
++QD LK++ R++++ +D ++ RF + I+P NK AE EL + I K F M +
Sbjct: 596 LLQDAPLKSQDIRKSIEQKVTKDNDIKVRFRSKINPDSNKSAEEELRKHISKEDFANMDV 655
Query: 215 VGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCI 274
+GQFNLGFII K +DLFIIDQHATDEKYNFE LQ +T++++Q LV P+ L LT N+ +
Sbjct: 656 IGQFNLGFIITKLKNDLFIIDQHATDEKYNFEQLQASTVMENQVLVNPKPLQLTAGNESL 715
Query: 275 LKDNLPVFYKNGFEFSFDSSDDGN--VLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEH 332
L +N +F KNGF F D S V LTS+P+SK+ G++DIEE+LFMLQ +N T
Sbjct: 716 LIENEDIFNKNGFTFKIDESAPCTQKVSLTSIPLSKSMVFGKQDIEEMLFMLQDSNHT-M 774
Query: 333 CRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
CRPSRIRAMFA+RACRKSVMIG+ LS +M LV +MG I+QPW
Sbjct: 775 CRPSRIRAMFATRACRKSVMIGKPLSKSDMRRLVNHMGEIEQPW 818
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 49/62 (79%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
+LVNE+Y Q+NN+QYPF+ LNI VDVNVTPDKRQ+F++ EK+LL+T+K + +++
Sbjct: 297 RLVNEIYKQYNNNQYPFVYLNITSKSSLVDVNVTPDKRQVFLEKEKVLLSTIKASLIEAF 356
Query: 62 AI 63
+
Sbjct: 357 KM 358
>gi|307192776|gb|EFN75866.1| Mismatch repair endonuclease PMS2 [Harpegnathos saltator]
Length = 672
Score = 230 bits (587), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 141/388 (36%), Positives = 214/388 (55%), Gaps = 49/388 (12%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHIT--- 58
KLVN VYH++NN QYPF+ LNI++ R S DVNVTPDKR IF E+ +LAT+K +
Sbjct: 301 KLVNNVYHKYNNKQYPFVFLNIKLDRQSADVNVTPDKRTIFFTQERFILATLKYSLIAKW 360
Query: 59 DSYAIGFTVDG-NNMNQSMEQDPSSDVDMEKIQR-SNSEEVEHETIPVPSEDNSNFSHEA 116
D FT ++N S+++ S + +R S + H + N++ ++
Sbjct: 361 DKMQGNFTAKTLTDLNFSLKRAISPNNAHPPAKRLQTSSSISHMS------RNNDIWNDI 414
Query: 117 NLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKAR--YARRTVQ 174
L++ VE + +++ +I+ +LKA+ + ++
Sbjct: 415 KLRKKSVNVE--------------------------MMINITMIKQKLKAKQNVVKASIN 448
Query: 175 AQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFII 234
R ++ ++ ++ +AE EL R + K F KM+IVGQFNLGFII + + DLFII
Sbjct: 449 TGRRI---KYRVQMEGNQG-DAEKELQRELTKDSFSKMEIVGQFNLGFIIARLEDDLFII 504
Query: 235 DQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSS 294
DQHATDEK+ FE T +K+QKL++P+ L+ + +N+ IL D+ F NGF F D
Sbjct: 505 DQHATDEKFRFEKFSNETKLKTQKLIIPKPLNFSALNETILIDHQQTFEDNGFTFKIDKQ 564
Query: 295 DD--GNVLLTSLPMSKNTTLGREDIEELLFMLQHT---NSTEHC-RPSRIRAMFASRACR 348
+ + L +P+S G+EDIEEL+F+++ N +H RPSR+R M ASRACR
Sbjct: 565 AEPGKRIELIGMPVSGGWQFGQEDIEELVFLIREGGSENKEKHIFRPSRVRQMLASRACR 624
Query: 349 KSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+VMIG AL+ EM L+ M ++ PW
Sbjct: 625 SAVMIGTALNTNEMQRLIMQMTQMQNPW 652
>gi|307184301|gb|EFN70759.1| Mismatch repair endonuclease PMS2 [Camponotus floridanus]
Length = 672
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 140/384 (36%), Positives = 214/384 (55%), Gaps = 41/384 (10%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
KLVN VYH++NN QYPF+ LN++++R DVNVTPDKR IF E+L+LAT+K +T +
Sbjct: 301 KLVNNVYHKYNNKQYPFVFLNVKLNRQCADVNVTPDKRTIFFTQERLILATLKFSLTAKW 360
Query: 62 AIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSH--EANLQ 119
+ + + P +++ +R+ S SN+ H LQ
Sbjct: 361 --------DKLQGNFTAKPLTELKF-GFKRTIS---------------SNYVHPPAKRLQ 396
Query: 120 QSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRC 179
SP D+ I M ++ V +++ + K + + V+A
Sbjct: 397 ISPSISHMAKNDDIQTNIKSM-------KKPIDVEMTISFTIIKEKLKEKKIIVRAPVN- 448
Query: 180 VENRFHANIDPSKNK-EAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHA 238
+E R I N+ EAE EL R + K F KM+++GQFNLGFII + ++DLFIIDQHA
Sbjct: 449 IEKRIKYRIQMEANQDEAEKELQRELTKDSFGKMEVIGQFNLGFIITRLENDLFIIDQHA 508
Query: 239 TDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDD-- 296
TDEK+ FE L T +K+QKL+VP+ ++ + +++ IL ++ +F NGF F+ + +
Sbjct: 509 TDEKFRFEKLSNETKLKTQKLIVPKPMNFSALSETILIEHQKMFEDNGFTFNINEQAELG 568
Query: 297 GNVLLTSLPMSKNTTLGREDIEELLFMLQHTNS---TEHC-RPSRIRAMFASRACRKSVM 352
+ L +P+S + G+EDIEEL+F+++ + +H RPSR+R M ASRACR +VM
Sbjct: 569 KKIELIGMPVSGHWQFGQEDIEELVFLIREAGNEIKEKHIFRPSRVRQMLASRACRSAVM 628
Query: 353 IGRALSVGEMTGLVRNMGRIDQPW 376
IG AL+ EM L+ M ++ PW
Sbjct: 629 IGTALNTNEMHKLIMQMAQMQNPW 652
>gi|157787060|ref|NP_001099378.1| mismatch repair endonuclease PMS2 [Rattus norvegicus]
gi|149034928|gb|EDL89648.1| postmeiotic segregation increased 2 (S. cerevisiae) (predicted),
isoform CRA_a [Rattus norvegicus]
gi|149034929|gb|EDL89649.1| postmeiotic segregation increased 2 (S. cerevisiae) (predicted),
isoform CRA_a [Rattus norvegicus]
Length = 542
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 110/198 (55%), Positives = 143/198 (72%), Gaps = 7/198 (3%)
Query: 183 RFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEK 242
+F A I P +N+ AE EL R I+KSMF +M+I+GQFNLGFI+ K DLF++DQHA DEK
Sbjct: 327 KFRAKICPGENQAAEDELRREIRKSMFAEMEILGQFNLGFIVTKLKEDLFLVDQHAADEK 386
Query: 243 YNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVL-- 300
YNFE LQ+ T++++Q+L+ PQ L+LT +N+ +L +NL +F KNGF+F D +D V
Sbjct: 387 YNFEMLQQHTVLQAQRLITPQTLNLTAVNEAVLIENLEIFRKNGFDFIID--EDAPVTER 444
Query: 301 --LTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALS 358
L SLP SKN T G +DI+EL+FML + CRPSR+R MFASRACRKSVMIG ALS
Sbjct: 445 AKLISLPTSKNWTFGPQDIDELIFMLSDSPGV-MCRPSRVRQMFASRACRKSVMIGTALS 503
Query: 359 VGEMTGLVRNMGRIDQPW 376
EM L+ +MG +D PW
Sbjct: 504 ASEMKKLISHMGEMDHPW 521
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 54/93 (58%), Gaps = 6/93 (6%)
Query: 11 FNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGN 70
+N HQYPF++LN+ + + VD+NVTPDKRQI + EKLLLA +K + F D N
Sbjct: 2 YNRHQYPFVVLNVSVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLMGM----FDSDAN 57
Query: 71 NMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIP 103
+ S+ Q P +V+ ++ +E E E P
Sbjct: 58 KL--SVNQQPLLNVEGNLVKLHTAEVGEQENSP 88
>gi|195334603|ref|XP_002033967.1| GM20141 [Drosophila sechellia]
gi|194125937|gb|EDW47980.1| GM20141 [Drosophila sechellia]
Length = 901
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 133/275 (48%), Positives = 171/275 (62%), Gaps = 13/275 (4%)
Query: 106 SEDNSNFSHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLK 165
SED S E + + P +E D E+ D +P S S +T SL+ I LK
Sbjct: 605 SEDTDIASDEDDHIKLPTRIEFDE-----EMEDGLP----SNFSSGELTTSLEEIASSLK 655
Query: 166 A-RYARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFII 224
+R + + + RF I+P++N AE+EL R I K F +M+I+GQFNLGFII
Sbjct: 656 VHEQQQRDRRTRTKLQRLRFKTEINPNQNNSAEAELQREIDKEDFARMEIIGQFNLGFII 715
Query: 225 VKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYK 284
VK + DLFI+DQHATDEKYNFETLQ+TT ++ Q+L VPQNL LT +N+ +L +++ VF K
Sbjct: 716 VKLEDDLFIVDQHATDEKYNFETLQRTTQLEYQRLAVPQNLELTAVNEMVLLNHIDVFEK 775
Query: 285 NGFEFSFD--SSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMF 342
NGF+F D + V L P SK G+EDI+EL+FMLQ CRPSR+RAMF
Sbjct: 776 NGFKFEVDHEAPATKKVRLLGKPHSKRWEFGKEDIDELIFMLQDAPEGTICRPSRVRAMF 835
Query: 343 ASRACRKSVMIGRALSVG-EMTGLVRNMGRIDQPW 376
ASRACRKSVMIG ALS M L+ MG I+QPW
Sbjct: 836 ASRACRKSVMIGTALSRNTTMRRLITQMGEIEQPW 870
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 46/61 (75%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K++NE+YH++N Q PFI LNI +R VDVN+TPDKRQ+ +++E++LL +K + D++
Sbjct: 336 KVINEIYHRYNVQQQPFIYLNIITARSDVDVNLTPDKRQLLINNERILLLALKKSLLDTF 395
Query: 62 A 62
Sbjct: 396 G 396
>gi|296192534|ref|XP_002806632.1| PREDICTED: LOW QUALITY PROTEIN: mismatch repair endonuclease PMS2
[Callithrix jacchus]
Length = 1052
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 114/231 (49%), Positives = 158/231 (68%), Gaps = 4/231 (1%)
Query: 148 RQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKS 207
++ P+ S+ + ++K ++ + Q++ +F A I P +N+ AE EL + I KS
Sbjct: 803 KKVVPLDFSMSSLTKRMK-QFHHKAKQSEGEQNYRKFRAKICPGENQAAEDELRKEISKS 861
Query: 208 MFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHL 267
MF +M+I+GQFNLGFII K + D+FI+DQHATDEKYNFE LQ+ T+++ Q+L+VPQ L+L
Sbjct: 862 MFAEMEIIGQFNLGFIITKLNEDIFIVDQHATDEKYNFEMLQQHTVLQGQRLIVPQTLNL 921
Query: 268 TKINQCILKDNLPVFYKNGFEFSFDSSD--DGNVLLTSLPMSKNTTLGREDIEELLFMLQ 325
T +N+ IL +NL +F KNGF+F D S L SLP SKN T G +DI+EL+FML
Sbjct: 922 TAVNEIILIENLEIFRKNGFDFVIDESAPVTQKAKLISLPTSKNWTFGPQDIDELIFMLS 981
Query: 326 HTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+ CRPSR++ MFASRACRKSVMIG AL+ EM L+ +MG +D PW
Sbjct: 982 DSPGV-MCRPSRVKQMFASRACRKSVMIGTALNPSEMKKLITHMGEMDHPW 1031
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 71/113 (62%), Gaps = 17/113 (15%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
+LVNEVYH +N +QYPF++LNI + + VD+NVTPDKRQI + EKLLLA +K +
Sbjct: 494 RLVNEVYHMYNRNQYPFVVLNISVDAECVDINVTPDKRQILLQEEKLLLAVLKTSL---- 549
Query: 62 AIG-FTVDGNNMNQSMEQDPSSDV--DMEKIQRSNSEEVEHETIPVP-SEDNS 110
IG F D N +N S Q P D+ ++ K+ ++ E+ P+P +DNS
Sbjct: 550 -IGMFDSDVNKLNVS--QQPLLDIGGNLMKVHAADLEK------PLPEQQDNS 593
>gi|350413845|ref|XP_003490132.1| PREDICTED: mismatch repair endonuclease PMS2-like [Bombus
impatiens]
Length = 692
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 139/402 (34%), Positives = 225/402 (55%), Gaps = 58/402 (14%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITD-- 59
KL+N++YH++NN QYPFI LN+++++ S D+NVTP+KR IF E L+LAT+K +++
Sbjct: 302 KLINQIYHKYNNKQYPFIFLNLKLNKHSTDINVTPNKRIIFFTQENLILATLKYNLSSRW 361
Query: 60 ---------------SYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPV 104
S+ + T+ N ++ +++ + + + KI+ + + ++H
Sbjct: 362 DKLQGNLTVNPVPELSFGVKRTISPTNADRPIKRFHNLNT-ISKIEHTEKQNIQH----- 415
Query: 105 PSEDNSNFSHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQL 164
+ +Q + + +++D S +T+S+ I+ QL
Sbjct: 416 -------INKNKTIQYDNDNDNENNITNKTKILD-----------SVQMTISILAIKQQL 457
Query: 165 --KARYARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGF 222
K + V + R +F A +D N AE+EL + + K F +M+I+GQFNLGF
Sbjct: 458 QEKQNLLSKCVISSTRI---KFKAQMDQHSN--AENELKKQLTKDSFFQMEIIGQFNLGF 512
Query: 223 IIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVF 282
II + DLFIIDQHATDEKY FE L T +++QKL++P+ L+++ +N+ IL ++ F
Sbjct: 513 IITRLKEDLFIIDQHATDEKYRFEKLNNETQLRTQKLIIPKFLNISPLNETILIEHQKTF 572
Query: 283 YKNGFEFSFDSSDDGN--VLLTSLPMSKNTTLGREDIEELLFMLQ------HTNSTEHCR 334
NGF F DS + V LT +P+S + G++DIEEL+F+++ NST R
Sbjct: 573 EDNGFFFKIDSEGESGHRVQLTGIPVSGHWQFGQDDIEELIFLIREGGIENQKNST--FR 630
Query: 335 PSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
PSR+R M AS+ACRK+VMIG AL+ +M L+ M ++ PW
Sbjct: 631 PSRVRQMLASKACRKAVMIGTALNNNDMHKLITQMAEMENPW 672
>gi|194754970|ref|XP_001959765.1| GF11871 [Drosophila ananassae]
gi|190621063|gb|EDV36587.1| GF11871 [Drosophila ananassae]
Length = 919
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 128/272 (47%), Positives = 169/272 (62%), Gaps = 12/272 (4%)
Query: 117 NLQQSPETVEPDTPDETIEVI--------DDMPRLQGSYRQSTPVTLSLDIIQDQLKARY 168
+L QS + E D D+ IE+ ++ P S S + SL+ I ++KA
Sbjct: 609 SLSQSTDVTEEDDYDDGIELPTRIEFDKEEEDPDQSMSKYASGELRTSLEEIASKMKAHE 668
Query: 169 ARRTVQAQDRCVEN-RFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKY 227
+ ++ RF + I+P++N AE+EL R I K F +M I+GQFNLGFIIVK
Sbjct: 669 EEHRERRSRAKLQRLRFKSEINPNQNNNAEAELQREIGKEDFARMDIIGQFNLGFIIVKL 728
Query: 228 DSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGF 287
+ DLFI+DQHATDEKYNFETLQ+TT ++ Q+L VPQ+L LT +N+ +L D+L VF KNGF
Sbjct: 729 EDDLFIVDQHATDEKYNFETLQRTTQLEYQRLTVPQSLDLTAVNEMVLIDHLAVFEKNGF 788
Query: 288 EFSF--DSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASR 345
+F D+ + L P SK G+EDI+EL+FMLQ CRPSR+RAMFASR
Sbjct: 789 KFEINHDAPATKKIKLLGKPHSKRWEFGKEDIDELIFMLQDAPEGTICRPSRVRAMFASR 848
Query: 346 ACRKSVMIGRALS-VGEMTGLVRNMGRIDQPW 376
ACRKSVMIG AL+ M L+ MG I+QPW
Sbjct: 849 ACRKSVMIGTALNRTTTMRRLITQMGEIEQPW 880
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 46/61 (75%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K++NE+YH++N Q PFI LNI +R VDVN+TPDKRQ+ +++E++LL +K + D++
Sbjct: 335 KVMNEIYHRYNVQQQPFIYLNIVTARSDVDVNLTPDKRQLLINNERILLLALKKSLLDTF 394
Query: 62 A 62
Sbjct: 395 G 395
>gi|169642755|gb|AAI60858.1| Pms2 protein [Rattus norvegicus]
Length = 853
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 110/198 (55%), Positives = 143/198 (72%), Gaps = 7/198 (3%)
Query: 183 RFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEK 242
+F A I P +N+ AE EL R I+KSMF +M+I+GQFNLGFI+ K DLF++DQHA DEK
Sbjct: 638 KFRAKICPGENQAAEDELRREIRKSMFAEMEILGQFNLGFIVTKLKEDLFLVDQHAADEK 697
Query: 243 YNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVL-- 300
YNFE LQ+ T++++Q+L+ PQ L+LT +N+ +L +NL +F KNGF+F D +D V
Sbjct: 698 YNFEMLQQHTVLQAQRLITPQTLNLTAVNEAVLIENLEIFRKNGFDFIID--EDAPVTER 755
Query: 301 --LTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALS 358
L SLP SKN T G +DI+EL+FML + CRPSR+R MFASRACRKSVMIG ALS
Sbjct: 756 AKLISLPTSKNWTFGPQDIDELIFMLSDSPGV-MCRPSRVRQMFASRACRKSVMIGTALS 814
Query: 359 VGEMTGLVRNMGRIDQPW 376
EM L+ +MG +D PW
Sbjct: 815 ASEMKKLISHMGEMDHPW 832
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 62/102 (60%), Gaps = 6/102 (5%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
+LVNEVYH +N HQYPF++LN+ + + VD+NVTPDKRQI + EKLLLA +K +
Sbjct: 304 RLVNEVYHMYNRHQYPFVVLNVSVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLMGM- 362
Query: 62 AIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIP 103
F D N + S+ Q P +V+ ++ +E E E P
Sbjct: 363 ---FDSDANKL--SVNQQPLLNVEGNLVKLHTAEVGEQENSP 399
>gi|403285983|ref|XP_003934288.1| PREDICTED: mismatch repair endonuclease PMS2 [Saimiri boliviensis
boliviensis]
Length = 862
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 113/231 (48%), Positives = 157/231 (67%), Gaps = 4/231 (1%)
Query: 148 RQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKS 207
++ P+ S+ + ++K ++ + Q++ +F A I P +N+ AE EL + I KS
Sbjct: 613 KKVVPLDFSMSSLTKRIK-QFHHKAKQSEGEQNYRKFRAKICPGENQAAEDELRKEISKS 671
Query: 208 MFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHL 267
MF +M+I+GQFNLGFII K + D+FI+DQHATDEKYNFE LQ+ T+++ Q+L+ PQ L+L
Sbjct: 672 MFAEMEIIGQFNLGFIITKLNEDIFIVDQHATDEKYNFEMLQQHTMLQGQRLIAPQTLNL 731
Query: 268 TKINQCILKDNLPVFYKNGFEFSFDSSD--DGNVLLTSLPMSKNTTLGREDIEELLFMLQ 325
T +N+ IL +NL +F KNGF+F D S L SLP SKN T G +DI+EL+FML
Sbjct: 732 TAVNETILIENLEIFRKNGFDFVIDESAPVTQRAKLISLPTSKNWTFGPQDIDELIFMLS 791
Query: 326 HTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+ CRPSR++ MFASRACRKSVMIG AL+ EM L+ +MG +D PW
Sbjct: 792 DSPGV-MCRPSRVKQMFASRACRKSVMIGTALNPSEMKKLITHMGEMDHPW 841
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 54/83 (65%), Gaps = 6/83 (7%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
+LVNEVYH +N +QYPF++LNI + + VD+NVTPDKRQI + EKLLLA +K +
Sbjct: 304 RLVNEVYHMYNRNQYPFVVLNISVDAECVDINVTPDKRQILLQEEKLLLAVLKTSLVGM- 362
Query: 62 AIGFTVDGNNMNQSMEQDPSSDV 84
F D N +N S Q P D+
Sbjct: 363 ---FDSDVNKLNVS--QQPLLDI 380
>gi|345305110|ref|XP_001512507.2| PREDICTED: mismatch repair endonuclease PMS2 [Ornithorhynchus
anatinus]
Length = 895
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 118/233 (50%), Positives = 156/233 (66%), Gaps = 8/233 (3%)
Query: 148 RQSTPVTLSLDIIQDQLKA--RYARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIK 205
++ PV S++ + ++K R + +AQ+ RF A I P +N+ AE EL + I
Sbjct: 646 KKMVPVEFSMNALAKRIKQLHREEKNRARAQNY---RRFRAKISPGENQAAEDELRKEIS 702
Query: 206 KSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNL 265
K MF +M+I+GQFNLGFII K ++DLFIIDQHATDEKYNFE LQ ++ + Q+L+VPQNL
Sbjct: 703 KEMFTQMEIIGQFNLGFIITKLNADLFIIDQHATDEKYNFEMLQLHSVPQGQRLIVPQNL 762
Query: 266 HLTKINQCILKDNLPVFYKNGFEFSFDSSD--DGNVLLTSLPMSKNTTLGREDIEELLFM 323
+LT +N+ IL +NL +F KNGF+F D V L SLP SKN T G +DI+E++FM
Sbjct: 763 NLTAVNEAILIENLEIFKKNGFDFIIDEKAPVTERVKLISLPTSKNWTFGPQDIDEMIFM 822
Query: 324 LQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
L CRPSR+R MFASRACRKSVMIG AL+ EM L+ +M I+ PW
Sbjct: 823 LSDCPGV-MCRPSRVRQMFASRACRKSVMIGTALNTIEMKKLITHMSEIEHPW 874
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 44/56 (78%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHI 57
+LVNEVYH +N HQYPF++LNI + + VD+NVTPDKRQI + EKLLLA +K +
Sbjct: 322 RLVNEVYHTYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQKEKLLLAVLKTSL 377
>gi|449662703|ref|XP_002165510.2| PREDICTED: mismatch repair endonuclease PMS2-like [Hydra
magnipapillata]
Length = 802
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 115/215 (53%), Positives = 146/215 (67%), Gaps = 5/215 (2%)
Query: 164 LKARYARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFI 223
LK Y R TV Q+ FHA I+PS N AE EL + + K MF KM+IVGQFNLGFI
Sbjct: 570 LKEYYQRHTVCEQN--TSTLFHAKINPSHNSAAEEELTKHVSKDMFAKMEIVGQFNLGFI 627
Query: 224 IVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFY 283
I KY+ +LFIIDQHATDEKYNFETLQK ++K Q+L+ P ++ LT +N+ IL DN+ +F
Sbjct: 628 ITKYEENLFIIDQHATDEKYNFETLQKKHVLKGQRLIEPISMELTLVNESILIDNINIFK 687
Query: 284 KNGFEFSFDSSDDGN--VLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAM 341
KNGFEF D GN + L ++P S N++ D+EEL+FML + CRPSR+R M
Sbjct: 688 KNGFEFKIDYEQTGNSKIKLLTVPTSLNSSFSVSDVEELIFMLNDSPGV-MCRPSRVRQM 746
Query: 342 FASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
FAS+ACR SVM+G AL M LV++MG I+ PW
Sbjct: 747 FASKACRSSVMVGTALDHFMMKRLVQHMGEIEHPW 781
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 43/54 (79%)
Query: 1 MKLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVK 54
++++NEVYH +N HQYPFI LN+ +D VDVN+TP+KRQI + EK+LLA VK
Sbjct: 301 LRVINEVYHTYNRHQYPFIYLNVLARKDCVDVNITPNKRQIMVQEEKVLLAFVK 354
>gi|395514664|ref|XP_003761534.1| PREDICTED: mismatch repair endonuclease PMS2 [Sarcophilus harrisii]
Length = 997
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 115/206 (55%), Positives = 146/206 (70%), Gaps = 6/206 (2%)
Query: 173 VQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLF 232
V+AQ+ RF A I P +N+ AE EL + I K MF +M+I+GQFNLGFII K ++DLF
Sbjct: 775 VKAQNY---RRFRAKISPGENQAAEDELRKEISKDMFAEMEIIGQFNLGFIITKLNTDLF 831
Query: 233 IIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFD 292
IIDQHATDEKYNFE LQ T+++ Q+L++PQ L+LT IN+ IL +NL +F KNGF+F D
Sbjct: 832 IIDQHATDEKYNFEMLQLHTVLQGQRLIIPQALNLTAINEAILIENLEIFRKNGFDFVID 891
Query: 293 --SSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKS 350
+ V L SLP SKN T G +DI+E++FML CRPSR+R MFASRACRKS
Sbjct: 892 ELAPVTERVKLISLPTSKNWTFGPQDIDEMIFMLSDCPGV-MCRPSRVRQMFASRACRKS 950
Query: 351 VMIGRALSVGEMTGLVRNMGRIDQPW 376
VMIG AL+ EM L+ +MG I+ PW
Sbjct: 951 VMIGTALNKNEMKKLISHMGEIEHPW 976
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 67/109 (61%), Gaps = 12/109 (11%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
+LVNEVYH +N HQYPF++LNI + + VD+NVTPDKRQI + EKLLLA +K +
Sbjct: 432 RLVNEVYHLYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSL---- 487
Query: 62 AIG-FTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDN 109
IG F D N + S Q P DV+ ++ S E+E P P ++N
Sbjct: 488 -IGMFESDVNKL--SPNQKPLLDVEGNLLKMC-STEIEK---PPPEKNN 529
>gi|355712463|gb|AES04355.1| PMS2 postmeiotic segregation increased 2 [Mustela putorius furo]
Length = 587
Score = 228 bits (581), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 108/196 (55%), Positives = 140/196 (71%), Gaps = 3/196 (1%)
Query: 183 RFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEK 242
+F A I P +N+ AE EL + I K+MF +M+I+GQFNLGFII K ++D+FI+DQHATDEK
Sbjct: 373 KFRAKICPGENQAAEEELRKEISKAMFAEMEIIGQFNLGFIITKLNADIFIVDQHATDEK 432
Query: 243 YNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSD--DGNVL 300
YNFE LQ+ T ++ Q+L+ PQ L+LT +N+ +L +NL +F KNGF+F D
Sbjct: 433 YNFEMLQQHTALQGQRLIAPQTLNLTAVNEAVLIENLEIFRKNGFDFVIDEEAPVPERAK 492
Query: 301 LTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVG 360
L SLP SKN T G +DI+EL+FML + CRPSR+R MFASRACRKSVMIG ALS
Sbjct: 493 LISLPTSKNWTFGPQDIDELIFMLSDSPGV-MCRPSRVRQMFASRACRKSVMIGTALSTS 551
Query: 361 EMTGLVRNMGRIDQPW 376
EM L+ +MG +D PW
Sbjct: 552 EMKKLITHMGEMDHPW 567
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 62/95 (65%), Gaps = 8/95 (8%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
+LVNEVYH +N HQYPF++LNI + + VD+NVTPDKRQI + EKLLLA +K +
Sbjct: 31 RLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAILKTSL---- 86
Query: 62 AIG-FTVDGNNMNQSMEQDPSSDVDMEKIQRSNSE 95
+G F D N + S+ Q P DV+ I+ ++E
Sbjct: 87 -VGMFDSDVNKL--SVSQQPLLDVEGHLIKTHSAE 118
>gi|355560440|gb|EHH17126.1| PMS2 like protein, partial [Macaca mulatta]
Length = 820
Score = 228 bits (580), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 114/227 (50%), Positives = 152/227 (66%), Gaps = 6/227 (2%)
Query: 155 LSLDIIQDQLKARYA---RRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEK 211
++LD L R R T Q++ +F A I P +N+ AE EL + I K+MF +
Sbjct: 574 VALDFSMSSLAKRIKQLHRETQQSEGEQNYRKFRAKICPGENQAAEDELRKEISKTMFAE 633
Query: 212 MKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKIN 271
M+IVGQFNLGFII K + DLFI+DQHATDEKYNFE LQ+ T+++ Q+L+ PQ L+LT +N
Sbjct: 634 MEIVGQFNLGFIITKLNEDLFIVDQHATDEKYNFEMLQQHTVLQGQRLIAPQTLNLTAVN 693
Query: 272 QCILKDNLPVFYKNGFEFSFDSSD--DGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNS 329
+ +L +NL +F KNGF+F D + L SLP SKN T G +DI+EL+F+L +
Sbjct: 694 EAVLIENLEIFRKNGFDFVIDENAPVTERAKLISLPTSKNWTFGPQDIDELIFLLSDSPG 753
Query: 330 TEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
CRPSR++ MFASRACRKSVMIG AL+ EM L+ +MG +D PW
Sbjct: 754 V-MCRPSRVKQMFASRACRKSVMIGTALNTSEMKKLITHMGEMDHPW 799
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 57/85 (67%), Gaps = 8/85 (9%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
+LVNEVYH +N HQYPF++LNI + + VD+NVTPDKRQI + EKLLLA +K +
Sbjct: 262 RLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSL---- 317
Query: 62 AIG-FTVDGNNMNQSMEQDPSSDVD 85
IG F D N +N S Q P D++
Sbjct: 318 -IGMFDSDVNKLNVS--QQPLLDIE 339
>gi|390345876|ref|XP_786592.3| PREDICTED: mismatch repair endonuclease PMS2-like
[Strongylocentrotus purpuratus]
Length = 931
Score = 227 bits (579), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 112/197 (56%), Positives = 141/197 (71%), Gaps = 7/197 (3%)
Query: 184 FHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKY 243
F A I PS N AE EL+R I K MF KM+I+GQFNLGFII K DLFIIDQHATDEKY
Sbjct: 718 FRAKIAPSDNASAEEELSREISKDMFSKMEILGQFNLGFIIAKLGQDLFIIDQHATDEKY 777
Query: 244 NFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDG----NV 299
NFETLQK T+++ Q+L+ P L LT +N+ IL D++ +F KNGF+F + +DG V
Sbjct: 778 NFETLQKHTVLQGQRLIQPLPLELTAVNESILMDDVEIFKKNGFDFIIN--EDGRPTERV 835
Query: 300 LLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSV 359
L S P SKN T G++DI+EL+FML HCRP+++R MFASR+CRKS+MIG AL+
Sbjct: 836 KLVSQPFSKNWTFGKDDIDELIFMLSDAPGV-HCRPTKVRQMFASRSCRKSIMIGTALNK 894
Query: 360 GEMTGLVRNMGRIDQPW 376
EM LV +MG ++QPW
Sbjct: 895 AEMKKLVCHMGELEQPW 911
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 46/56 (82%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHI 57
KL+NEV+H +N HQYPF++++I +++D+VDVNVTPDKR++ + EK LLA +K +
Sbjct: 296 KLINEVFHMYNRHQYPFVVMDISLAKDAVDVNVTPDKRKVLVQEEKTLLAILKASL 351
>gi|194882839|ref|XP_001975517.1| GG22356 [Drosophila erecta]
gi|190658704|gb|EDV55917.1| GG22356 [Drosophila erecta]
Length = 888
Score = 227 bits (579), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 120/231 (51%), Positives = 155/231 (67%), Gaps = 4/231 (1%)
Query: 150 STPVTLSLDIIQDQLKARYA-RRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSM 208
S + SL+ I LKA +R +A+ + RF I+P++N AE+EL R I K
Sbjct: 627 SGEIISSLEEIASSLKAHEQHQRDRRARAKLQRLRFKTEINPNQNNSAEAELQREIDKED 686
Query: 209 FEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLT 268
F +M+I+GQFNLGFIIVK + DLFI+DQHATDEKYNFETLQ+TT ++ Q+L VPQ+L LT
Sbjct: 687 FARMEIIGQFNLGFIIVKLEDDLFIVDQHATDEKYNFETLQRTTQLEYQRLTVPQSLELT 746
Query: 269 KINQCILKDNLPVFYKNGFEFSFD--SSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQH 326
+N+ +L +++ VF KNGF+F D + V L P SK G+EDI+EL+FMLQ
Sbjct: 747 AVNEMVLLNHIDVFEKNGFKFEVDHEAPATKKVRLLGKPHSKRWEFGKEDIDELIFMLQD 806
Query: 327 TNSTEHCRPSRIRAMFASRACRKSVMIGRALSVG-EMTGLVRNMGRIDQPW 376
CRPSR+RAMFASRACRKSVMIG AL+ M L+ MG I+QPW
Sbjct: 807 APEGTICRPSRVRAMFASRACRKSVMIGTALNRNTTMRRLITQMGEIEQPW 857
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 65/113 (57%), Gaps = 10/113 (8%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K++NEVYH++N Q PFI LNI +R VDVN+TPDKRQ+ +++E++LL +K + D++
Sbjct: 336 KVMNEVYHRYNVQQQPFIYLNIVTARSDVDVNLTPDKRQLLINNERILLLALKKSLLDTF 395
Query: 62 A---IGFTVDGNNMNQSMEQDPSSDVDMEKIQ-----RSNSEEVEHETIPVPS 106
F + + +E P ++ D K Q + +EE E +P S
Sbjct: 396 GQTPATFQMQNTTIVSMLE--PKTNPDKTKFQEELSKENKNEEASEEDVPTTS 446
>gi|380794609|gb|AFE69180.1| mismatch repair endonuclease PMS2 isoform a, partial [Macaca
mulatta]
Length = 853
Score = 227 bits (579), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 114/227 (50%), Positives = 152/227 (66%), Gaps = 6/227 (2%)
Query: 155 LSLDIIQDQLKARYA---RRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEK 211
++LD L R R T Q++ +F A I P +N+ AE EL + I K+MF +
Sbjct: 607 VALDFSMSSLAKRIKQLHRETQQSEGEQNYRKFRAKICPGENQAAEDELRKEISKTMFAE 666
Query: 212 MKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKIN 271
M+IVGQFNLGFII K + DLFI+DQHATDEKYNFE LQ+ T+++ Q+L+ PQ L+LT +N
Sbjct: 667 MEIVGQFNLGFIITKLNEDLFIVDQHATDEKYNFEMLQQHTVLQGQRLIAPQTLNLTAVN 726
Query: 272 QCILKDNLPVFYKNGFEFSFDSSD--DGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNS 329
+ +L +NL +F KNGF+F D + L SLP SKN T G +DI+EL+F+L +
Sbjct: 727 EAVLIENLEIFRKNGFDFVIDENAPVTERAKLISLPTSKNWTFGPQDIDELIFLLSDSPG 786
Query: 330 TEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
CRPSR++ MFASRACRKSVMIG AL+ EM L+ +MG +D PW
Sbjct: 787 V-MCRPSRVKQMFASRACRKSVMIGTALNTSEMKKLITHMGEMDHPW 832
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 57/85 (67%), Gaps = 8/85 (9%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
+LVNEVYH +N HQYPF++LNI + + VD+NVTPDKRQI + EKLLLA +K +
Sbjct: 295 RLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSL---- 350
Query: 62 AIG-FTVDGNNMNQSMEQDPSSDVD 85
IG F D N +N S Q P D++
Sbjct: 351 -IGMFDSDVNKLNVS--QQPLLDIE 372
>gi|354467731|ref|XP_003496322.1| PREDICTED: mismatch repair endonuclease PMS2 [Cricetulus griseus]
Length = 864
Score = 227 bits (579), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 124/257 (48%), Positives = 166/257 (64%), Gaps = 20/257 (7%)
Query: 137 IDDMPRLQGSYRQSTP-VTLSLDIIQ-----DQLKARYARRTVQAQDRCVEN-------R 183
ID PRL G++ S+ V +++ I + D + A+R Q Q + N +
Sbjct: 590 IDIPPRLLGTHNTSSAQVDVAVKIHKKVVHLDFSMSSLAKRMKQLQHQKQRNDSKQSYRK 649
Query: 184 FHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKY 243
F A I P +N+ AE EL + I KSMF +M+I+GQFNLGFII K DLF++DQHA DEKY
Sbjct: 650 FRAKICPGENQAAEDELRKEISKSMFAEMEILGQFNLGFIITKLKEDLFLVDQHAADEKY 709
Query: 244 NFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVL--- 300
NFE LQ+ T+++ Q+L+ PQ L+LT +N+ +L +NL +F KNGF+F D +D V
Sbjct: 710 NFEMLQQHTVLQVQRLITPQTLNLTAVNEAVLIENLEIFKKNGFDFVID--EDAPVTERA 767
Query: 301 -LTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSV 359
L SLP SKN T G +DI+EL+FML + CRPSR+R MFASRACRKSVMIG AL+
Sbjct: 768 KLISLPTSKNWTFGPQDIDELIFMLSDSPGV-MCRPSRVRQMFASRACRKSVMIGTALNT 826
Query: 360 GEMTGLVRNMGRIDQPW 376
EM L+ +MG +D PW
Sbjct: 827 SEMKKLITHMGEMDHPW 843
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 54/84 (64%), Gaps = 8/84 (9%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
KLVNEVYH +N HQYP ++LNI + + VD+NVTPDKRQI + EKLLLA +K +
Sbjct: 304 KLVNEVYHMYNRHQYPCVVLNISVDSECVDINVTPDKRQILLQEEKLLLAILKTSL---- 359
Query: 62 AIG-FTVDGNNMNQSMEQDPSSDV 84
IG F D N N + Q P D+
Sbjct: 360 -IGMFDSDANKFN--VNQQPLLDI 380
>gi|345801327|ref|XP_536879.3| PREDICTED: mismatch repair endonuclease PMS2 [Canis lupus
familiaris]
Length = 866
Score = 227 bits (578), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 108/196 (55%), Positives = 140/196 (71%), Gaps = 3/196 (1%)
Query: 183 RFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEK 242
+F A I P +N+ AE EL + I K+MF +M+I+GQFNLGFII K +D+FI+DQHATDEK
Sbjct: 651 KFRAKICPGENQAAEDELRKEISKTMFAEMEIIGQFNLGFIITKLKADIFIVDQHATDEK 710
Query: 243 YNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSD--DGNVL 300
YNFE LQ+ T+++ Q+L+ PQ L+LT +N+ IL +NL +F KNGF+F D
Sbjct: 711 YNFEMLQQHTVLQGQRLIAPQTLNLTAVNEAILIENLEIFRKNGFDFVIDEGAPVTERAK 770
Query: 301 LTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVG 360
L SLP SKN T G +DI+EL+FML + CRPSR+R MFASRACRKSVMIG AL+
Sbjct: 771 LISLPTSKNWTFGPQDIDELIFMLSDSPGV-MCRPSRVRQMFASRACRKSVMIGTALNTS 829
Query: 361 EMTGLVRNMGRIDQPW 376
EM L+ +MG +D PW
Sbjct: 830 EMKKLITHMGEMDHPW 845
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 58/94 (61%), Gaps = 6/94 (6%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
+LVNEVYH +N HQYPFI+LNI + + +D+NVTPDKRQI + EKLLLA +K + +
Sbjct: 304 RLVNEVYHMYNRHQYPFIVLNISVDSECIDINVTPDKRQILLQEEKLLLAVLKTSLIAMF 363
Query: 62 AIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSE 95
D N ++ Q P D++ I+ +E
Sbjct: 364 ------DSNVNKLTVSQQPLLDIEGHVIKTHQAE 391
>gi|329664144|ref|NP_001192867.1| mismatch repair endonuclease PMS2 [Bos taurus]
gi|296473094|tpg|DAA15209.1| TPA: PMS2 postmeiotic segregation increased 2 [Bos taurus]
Length = 864
Score = 227 bits (578), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 108/196 (55%), Positives = 140/196 (71%), Gaps = 3/196 (1%)
Query: 183 RFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEK 242
+F A I P +N+ AE EL + I K+MF +M+I+GQFNLGFII K ++D+FI+DQHATDEK
Sbjct: 649 KFRAKICPGENQAAEDELRKEISKTMFAEMEIIGQFNLGFIITKLNADIFIVDQHATDEK 708
Query: 243 YNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFD--SSDDGNVL 300
YNFE LQ+ T+++ Q+L+ PQ L LT +N+ IL +NL +F KNGF+F D +
Sbjct: 709 YNFEMLQQHTVLQGQRLIAPQTLSLTAVNEAILIENLEIFRKNGFDFVIDEHAPVTERAK 768
Query: 301 LTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVG 360
L SLP SKN T G +DI+ELLFML + CRPSR+R MFASRACRKSVMIG L+
Sbjct: 769 LISLPTSKNWTFGPQDIDELLFMLSDSPGV-MCRPSRVRQMFASRACRKSVMIGTPLNTS 827
Query: 361 EMTGLVRNMGRIDQPW 376
EM L+ +MG +D PW
Sbjct: 828 EMKKLITHMGEMDHPW 843
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 66/109 (60%), Gaps = 12/109 (11%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
+LVNEVYH +N HQYPF++LN+ + VD+NVTPDKRQI + EKLLLA +K +
Sbjct: 304 RLVNEVYHMYNRHQYPFVVLNVSVDSACVDINVTPDKRQILLQEEKLLLAVLKTSL---- 359
Query: 62 AIG-FTVDGNNMNQSMEQDPSSDVDMEKIQRSNSE----EVEHETIPVP 105
IG F D N + S Q P DV+ I+R ++E E E + P P
Sbjct: 360 -IGMFESDVNKLQVS--QQPLLDVEGHLIKRPSAEMEKPEPEKKDDPAP 405
>gi|301784411|ref|XP_002927619.1| PREDICTED: mismatch repair endonuclease PMS2-like [Ailuropoda
melanoleuca]
Length = 870
Score = 227 bits (578), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 108/196 (55%), Positives = 140/196 (71%), Gaps = 3/196 (1%)
Query: 183 RFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEK 242
+F A I P +N+ AE EL + I K+MF +M+I+GQFNLGFII K ++D+FI+DQHATDEK
Sbjct: 655 KFRAKICPGENQAAEDELRKEISKTMFAEMEIIGQFNLGFIITKLNADIFIVDQHATDEK 714
Query: 243 YNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSD--DGNVL 300
YNFE LQ+ T ++ Q+L+ PQ L+LT +N+ +L +NL +F KNGF+F D
Sbjct: 715 YNFEMLQQHTALQGQRLIAPQTLNLTAVNEAVLIENLEIFRKNGFDFIIDEGAPVTERAK 774
Query: 301 LTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVG 360
L SLP SKN T G +DI+EL+FML + CRPSR+R MFASRACRKSVMIG AL+
Sbjct: 775 LISLPTSKNWTFGPQDIDELIFMLSDSPGV-MCRPSRVRQMFASRACRKSVMIGTALNTS 833
Query: 361 EMTGLVRNMGRIDQPW 376
EM LV +MG +D PW
Sbjct: 834 EMKKLVTHMGEMDHPW 849
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 51/76 (67%), Gaps = 4/76 (5%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
+LVNEVYH +N HQYPF++LNI + + VD+NVTPDKRQI + EKLLLA +K +
Sbjct: 304 RLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLVGM- 362
Query: 62 AIGFTVDGNNMNQSME 77
F D N +N S +
Sbjct: 363 ---FDSDVNKLNVSQQ 375
>gi|351704976|gb|EHB07895.1| Mismatch repair endonuclease PMS2 [Heterocephalus glaber]
Length = 870
Score = 227 bits (578), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 109/196 (55%), Positives = 139/196 (70%), Gaps = 3/196 (1%)
Query: 183 RFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEK 242
RF A I P +N+ AE EL + I K+MF +M+IVGQFNLGFI+ K D+F++DQHA DEK
Sbjct: 655 RFRAKICPGENQAAEDELRKEISKTMFAEMEIVGQFNLGFIVTKLKEDIFLVDQHAADEK 714
Query: 243 YNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSD--DGNVL 300
YNFE LQ+ T +++QKL+ PQ L+LT IN+ +L +NL +F KNGF+F D S
Sbjct: 715 YNFEMLQQHTALQAQKLIAPQTLNLTAINEAVLIENLEIFRKNGFDFVIDESAPVTKRAK 774
Query: 301 LTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVG 360
L SLP SKN T G +DI+EL+FML + CRPSR+R MFASRACRKSVMIG AL+
Sbjct: 775 LISLPTSKNWTFGPQDIDELIFMLSDSPGV-MCRPSRVRQMFASRACRKSVMIGTALNTS 833
Query: 361 EMTGLVRNMGRIDQPW 376
EM L+ +MG +D PW
Sbjct: 834 EMKKLIVHMGEMDHPW 849
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 52/79 (65%), Gaps = 6/79 (7%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
+LVNEVYH +N HQYPF++LNI + + VD+NVTPDKRQI + EKLLLA +K + +
Sbjct: 311 RLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAILKTSLIGMF 370
Query: 62 AIGFTVDGNNMNQSMEQDP 80
DG+ ++ Q P
Sbjct: 371 ------DGDVNKLTVNQQP 383
>gi|332031616|gb|EGI71088.1| Mismatch repair endonuclease PMS2 [Acromyrmex echinatior]
Length = 672
Score = 227 bits (578), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 147/388 (37%), Positives = 213/388 (54%), Gaps = 49/388 (12%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHIT--- 58
KL+N VYH++NN QYPF+ N+++ R DVNVTPDKR IF+ E+L+LAT+K +T
Sbjct: 301 KLINNVYHKYNNKQYPFVFFNLKLDRQCADVNVTPDKRTIFVTQERLILATLKFSLTIKW 360
Query: 59 DSYAIGFTVDG-NNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEAN 117
D FTV +N +++ SS H P
Sbjct: 361 DKLQGNFTVKTLTELNFGLKRTISSS---------------HTQPPA-----------KR 394
Query: 118 LQQSPETVEPDTPDETIEV-IDDMPRLQGSYRQSTPVTLSLDIIQDQL--KARYARRTVQ 174
LQ SP +V + I+ I M + T + +S+ I+++L K AR V
Sbjct: 395 LQVSP-SVSYIVKESDIQTNIKSMKK-----PVDTEMMISIVTIKEKLNEKVNIARTPVS 448
Query: 175 AQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFII 234
R ++ R + S EAE EL + + K F KM+I+GQFNLGFII + + DLFII
Sbjct: 449 TAKR-IKYRVQMEANQS---EAEKELQKELTKDSFGKMEIIGQFNLGFIIARLEDDLFII 504
Query: 235 DQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSS 294
DQHATDEK+ FE L T +K+QKL+VP+ L+ + +N+ IL ++ +F NGF F+ +
Sbjct: 505 DQHATDEKFRFEKLSNETKLKTQKLIVPKLLNFSALNETILIEHQQMFEDNGFTFNINEQ 564
Query: 295 DD--GNVLLTSLPMSKNTTLGREDIEELLFMLQHT---NSTEHC-RPSRIRAMFASRACR 348
+ + L +P+S + +EDIEEL+F+++ N +H RPSR+R M ASRACR
Sbjct: 565 AEPGKKIELIGMPVSGHWQFDQEDIEELIFLIREAGNENMDKHIYRPSRVRQMLASRACR 624
Query: 349 KSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+VMIG AL+ EM L+ M ++ PW
Sbjct: 625 SAVMIGTALNFSEMQRLITQMAQMQNPW 652
>gi|432100057|gb|ELK28950.1| Mismatch repair endonuclease PMS2 [Myotis davidii]
Length = 841
Score = 227 bits (578), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 118/231 (51%), Positives = 152/231 (65%), Gaps = 10/231 (4%)
Query: 155 LSLDIIQDQLKARYARRTVQAQDRCVEN--RFHANIDPSKNKEAESELNRVIKKSMFEKM 212
+ LD L R + Q Q R +N RF A I P +N+ AE EL + I K+MF +M
Sbjct: 591 VPLDFSLSSLTTRVKQLHHQEQRRGEQNYRRFRAKICPGENQAAEEELRKEISKTMFAEM 650
Query: 213 KIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKL-----VVPQNLHL 267
+++GQFNLGFII K D+DLFI+DQHATDEKYNFE LQ+ T ++ Q+L + PQ L+L
Sbjct: 651 EVIGQFNLGFIITKLDADLFIVDQHATDEKYNFEMLQQHTALQGQRLIRQVHIRPQTLNL 710
Query: 268 TKINQCILKDNLPVFYKNGFEFSFDSSD--DGNVLLTSLPMSKNTTLGREDIEELLFMLQ 325
T +N+ +L +NL +F KNGF+F D S L SLP SKN T G +DI+EL+FML
Sbjct: 711 TAVNEAVLIENLEIFRKNGFDFVIDESAPITERAKLISLPTSKNWTFGPQDIDELIFMLS 770
Query: 326 HTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+ CRPSR+R MFASRACRKSVMIG AL+ EM L+ +MG +D PW
Sbjct: 771 DSPGV-MCRPSRVRQMFASRACRKSVMIGTALNTSEMKKLIAHMGEMDHPW 820
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 68/113 (60%), Gaps = 12/113 (10%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
+LVNEVYH +N HQYPF++LN+ + VD+NVTPDKRQIF+ EKLLLA +K +
Sbjct: 285 RLVNEVYHMYNRHQYPFVVLNVSVDSGCVDINVTPDKRQIFLQDEKLLLAVLKTSL---- 340
Query: 62 AIG-FTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFS 113
IG F D + +N + Q P D++ ++ +E + PVP + S S
Sbjct: 341 -IGMFDSDVSKLN--ISQQPLLDIEGHSLKPHWAETGK----PVPEKQGSPAS 386
>gi|410984367|ref|XP_003998500.1| PREDICTED: mismatch repair endonuclease PMS2 [Felis catus]
Length = 880
Score = 227 bits (578), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 127/297 (42%), Positives = 180/297 (60%), Gaps = 26/297 (8%)
Query: 105 PSEDNSNFSHEANLQQ---SPETVEPDTPD------ETIEVIDDMPR--LQGSYRQSTPV 153
P++ SHE +Q SP V+ +P + I + D+P+ + ++ V
Sbjct: 564 PADTERGSSHEDGGRQHRVSPPPVDASSPSTRRFKKDGIPLNPDVPQGLVIAKNTSASQV 623
Query: 154 TLSLDIIQDQLKARYARRTVQA-------QDRCVEN-----RFHANIDPSKNKEAESELN 201
+++ I + + ++ R++ A Q+R E +F A I P +N+ AE EL
Sbjct: 624 DVAVKISKKVVPLAFSMRSLAARIKQLRHQERPQEGEQNYRKFRAKICPGENQAAEDELR 683
Query: 202 RVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVV 261
+ I K+MF M+I+GQFNLGFII K ++D+FI+DQHATDEKYNFE LQ+ T ++ Q+L+
Sbjct: 684 KEISKTMFADMEIIGQFNLGFIITKLNADIFIVDQHATDEKYNFEMLQQHTALQGQRLIA 743
Query: 262 PQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSD--DGNVLLTSLPMSKNTTLGREDIEE 319
PQ L+LT +N+ IL +NL +F KNGF+F D L SLP SKN T G +DI+E
Sbjct: 744 PQTLNLTAVNEAILIENLEIFRKNGFDFVIDEGAPVTERAKLISLPTSKNWTFGPQDIDE 803
Query: 320 LLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
L+FML + CRPSR+R MFASRACRKSVMIG AL+ EM L+ +MG +D PW
Sbjct: 804 LIFMLSDSPGV-MCRPSRVRQMFASRACRKSVMIGTALNTSEMKKLITHMGEMDHPW 859
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 69/109 (63%), Gaps = 12/109 (11%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
+LVNEVYH +N HQYPF++LNI + + VDVNVTPDKRQI + EKLLLA +K +
Sbjct: 314 RLVNEVYHMYNRHQYPFVVLNISVDSECVDVNVTPDKRQILLQEEKLLLAVLKTSL---- 369
Query: 62 AIG-FTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDN 109
IG F D N +N S Q P ++ I++ +S E+E PVP + +
Sbjct: 370 -IGMFDGDLNKLNVS--QQPLLGIEGNLIKK-HSAEMEK---PVPEKQD 411
>gi|426254881|ref|XP_004021103.1| PREDICTED: mismatch repair endonuclease PMS2 [Ovis aries]
Length = 864
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 108/196 (55%), Positives = 140/196 (71%), Gaps = 3/196 (1%)
Query: 183 RFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEK 242
+F A I P +N+ AE EL + I K+MF +M+I+GQFNLGFII K ++D+FI+DQHATDEK
Sbjct: 649 KFRAKICPGENQAAEDELRKEISKTMFAEMEIIGQFNLGFIITKLNADIFIVDQHATDEK 708
Query: 243 YNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFD--SSDDGNVL 300
YNFE LQ+ T+++ Q+L+ PQ L LT +N+ IL +NL +F KNGF+F D +
Sbjct: 709 YNFEMLQQHTVLQGQRLIAPQTLSLTAVNEAILIENLEIFRKNGFDFVIDEHAPVTERAK 768
Query: 301 LTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVG 360
L SLP SKN T G +DI+ELLFML + CRPSR+R MFASRACRKSVMIG L+
Sbjct: 769 LISLPTSKNWTFGPQDIDELLFMLSDSPGV-MCRPSRVRQMFASRACRKSVMIGTPLNTS 827
Query: 361 EMTGLVRNMGRIDQPW 376
EM L+ +MG +D PW
Sbjct: 828 EMKKLITHMGEMDHPW 843
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 67/109 (61%), Gaps = 12/109 (11%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
+LVNEVYH +N HQYPF++LNI + + VD+NVTPDKRQI + EKLLLA +K +
Sbjct: 304 RLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSL---- 359
Query: 62 AIG-FTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDN 109
IG F D N + S Q P DV+ I+R +E + P P +DN
Sbjct: 360 -IGMFESDVNKLQVS--QQPLLDVEGHLIKRPLAEMEK----PEPEKDN 401
>gi|340710084|ref|XP_003393628.1| PREDICTED: mismatch repair endonuclease PMS2-like [Bombus
terrestris]
Length = 692
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 141/397 (35%), Positives = 227/397 (57%), Gaps = 47/397 (11%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
KL+N++YH++NN QYPFI LN+++++ S D+NVTP+KR IF E L+LAT+K +++ +
Sbjct: 301 KLINQIYHKYNNKQYPFIFLNLKLNKHSTDINVTPNKRVIFCTQENLILATLKYNLSSRW 360
Query: 62 AIGFTVDGNNMNQSMEQDPSSDVDM---EKIQRSNSEEVEHETIPVPSEDNSN------F 112
+ + ++ +P ++ I +N++ P+ N N
Sbjct: 361 --------DKLQGNLTANPVPELSFGVKRTISPTNADR------PIKRFHNLNTISKIEH 406
Query: 113 SHEANLQQSPETVE---PDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQL--KAR 167
+ + N+Q +T++ + D I ++ G+ + S +S+ I+ QL K
Sbjct: 407 TEKQNIQCINKTIQYDNDNDNDNVQNNITTKTKILGTVQMS----ISILAIKQQLQEKQN 462
Query: 168 YARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKY 227
+ V + R +F A +D +N AE+EL + + K F +M+I+GQFNLGFII +
Sbjct: 463 LLSKCVISNTRI---KFKAQMD--QNSNAENELKKQLTKDSFFEMEIIGQFNLGFIITRL 517
Query: 228 DSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGF 287
DLFIIDQHATDEKY FE L T +++QKL++P+ L+++ +N+ IL ++ F NGF
Sbjct: 518 KEDLFIIDQHATDEKYRFEKLNNETQLRTQKLIIPKFLNISPLNETILIEHQKTFEDNGF 577
Query: 288 EFSFDSSDDGN--VLLTSLPMSKNTTLGREDIEELLFMLQ------HTNSTEHCRPSRIR 339
DS + V LT +P+S + G++DIEEL+F+++ NST RPSR+R
Sbjct: 578 FLKIDSEGESGHRVQLTGIPVSGHWQFGQDDIEELIFLIREGGIENQKNST--FRPSRVR 635
Query: 340 AMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
M AS+ACRK+VMIG AL+ +M L+ M ++ PW
Sbjct: 636 QMLASKACRKAVMIGMALNNNDMHKLITQMAEMENPW 672
>gi|1709686|sp|P54279.1|PMS2_MOUSE RecName: Full=Mismatch repair endonuclease PMS2; AltName: Full=DNA
mismatch repair protein PMS2; AltName: Full=PMS1 protein
homolog 2
gi|896063|gb|AAA87031.1| PMS2 [Mus musculus]
Length = 859
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 108/198 (54%), Positives = 142/198 (71%), Gaps = 7/198 (3%)
Query: 183 RFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEK 242
+F A I P +N+ AE EL + I KSMF +M+I+GQFNLGFI+ K DLF++DQHA DEK
Sbjct: 644 KFRAKICPGENQAAEDELRKEISKSMFAEMEILGQFNLGFIVTKLKEDLFLVDQHAADEK 703
Query: 243 YNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVL-- 300
YNFE LQ+ T++++Q+L+ PQ L+LT +N+ +L +NL +F KNGF+F D +D V
Sbjct: 704 YNFEMLQQHTVLQAQRLITPQTLNLTAVNEAVLIENLEIFRKNGFDFVID--EDAPVTER 761
Query: 301 --LTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALS 358
L SLP SKN T G +DI+EL+FML + CRPSR+R MFASRACRKSVMIG AL+
Sbjct: 762 AKLISLPTSKNWTFGPQDIDELIFMLSDSPGV-MCRPSRVRQMFASRACRKSVMIGTALN 820
Query: 359 VGEMTGLVRNMGRIDQPW 376
EM L+ +MG +D PW
Sbjct: 821 ASEMKKLITHMGEMDHPW 838
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 67/112 (59%), Gaps = 13/112 (11%)
Query: 1 MKLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
+ L YH +N HQYPF++LN+ + + VD+NVTPDKRQI + EKLLLA +K +
Sbjct: 303 LSLSMRFYHMYNRHQYPFVVLNVSVDSECVDINVTPDKRQILLQEEKLLLAVLKTSL--- 359
Query: 61 YAIG-FTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPS-EDNS 110
IG F D N +N + Q P DV+ + + ++ E+E PVP +DNS
Sbjct: 360 --IGMFDSDANKLN--VNQQPLLDVEGNLV-KLHTAELEK---PVPGKQDNS 403
>gi|156355115|ref|XP_001623519.1| predicted protein [Nematostella vectensis]
gi|156210229|gb|EDO31419.1| predicted protein [Nematostella vectensis]
Length = 786
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 115/235 (48%), Positives = 155/235 (65%), Gaps = 11/235 (4%)
Query: 146 SYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIK 205
S R++ V S++ ++ + + T A+ R F A I P N AE EL + I+
Sbjct: 536 SSRKTVEVEFSMEKLRSRSHSLNTSITQNAEVRI----FRAKISPENNSAAEEELTKNIE 591
Query: 206 KSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNL 265
K F +M+IVGQFNLGFI+ K D+DLFIIDQHA+DEKYNFE Q+ T++++Q+L++P+ L
Sbjct: 592 KGSFARMEIVGQFNLGFILAKLDNDLFIIDQHASDEKYNFEMQQRNTVLRNQRLIIPRKL 651
Query: 266 HLTKINQCILKDNLPVFYKNGFEFSFDSSDDG----NVLLTSLPMSKNTTLGREDIEELL 321
LT +N+ IL DNL +F KNGFEF D DD V L S+P SKN T G ED+EEL+
Sbjct: 652 ELTAVNESILLDNLEIFRKNGFEFQID--DDAPATQKVKLVSVPTSKNWTFGVEDVEELI 709
Query: 322 FMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
FML CRP+R+R MFASRACR S+M+G ALS M G+V +MG+++ PW
Sbjct: 710 FMLSDAPGI-LCRPTRVRKMFASRACRMSIMVGTALSHAHMQGIVGHMGQMEHPW 763
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 50/63 (79%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
++V+EVYH +N HQ+PF++L+I + RD+VDVNVTPDKRQ+F+ EKLLLAT++ + +
Sbjct: 305 RVVSEVYHMYNRHQFPFVMLDISLKRDAVDVNVTPDKRQVFLQQEKLLLATLRTSLIKMF 364
Query: 62 AIG 64
G
Sbjct: 365 DPG 367
>gi|74226946|dbj|BAE27115.1| unnamed protein product [Mus musculus]
Length = 859
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 108/198 (54%), Positives = 142/198 (71%), Gaps = 7/198 (3%)
Query: 183 RFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEK 242
+F A I P +N+ AE EL + I KSMF +M+I+GQFNLGFI+ K DLF++DQHA DEK
Sbjct: 644 KFRAKICPGENQAAEDELRKEISKSMFAEMEILGQFNLGFIVTKLKEDLFLVDQHAADEK 703
Query: 243 YNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVL-- 300
YNFE LQ+ T++++Q+L+ PQ L+LT +N+ +L +NL +F KNGF+F D +D V
Sbjct: 704 YNFEMLQQHTVLQAQRLITPQTLNLTAVNEAVLIENLEIFRKNGFDFVID--EDAPVTER 761
Query: 301 --LTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALS 358
L SLP SKN T G +DI+EL+FML + CRPSR+R MFASRACRKSVMIG AL+
Sbjct: 762 AKLISLPTSKNWTFGPQDIDELIFMLSDSPGV-MCRPSRVRQMFASRACRKSVMIGTALN 820
Query: 359 VGEMTGLVRNMGRIDQPW 376
EM L+ +MG +D PW
Sbjct: 821 ASEMKKLITHMGEMDHPW 838
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/111 (46%), Positives = 71/111 (63%), Gaps = 13/111 (11%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
KLVNEVYH +N HQYPF++LN+ + + VD+NVTPDKRQI + EKLLLA +K +
Sbjct: 304 KLVNEVYHMYNRHQYPFVVLNVSVDSECVDINVTPDKRQILLQEEKLLLAVLKTSL---- 359
Query: 62 AIG-FTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPS-EDNS 110
IG F D N +N + Q P DV+ + + ++ E+E PVP +DNS
Sbjct: 360 -IGMFDSDANKLN--VNQQPLLDVEGNLV-KLHTAELEK---PVPGKQDNS 403
>gi|328793875|ref|XP_003251937.1| PREDICTED: mismatch repair endonuclease PMS2-like, partial [Apis
mellifera]
Length = 599
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 135/383 (35%), Positives = 217/383 (56%), Gaps = 37/383 (9%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
KL+N++YH++NN QYPFI LN+++++ S D+NVTP+KR IF + L+LAT+K + +
Sbjct: 227 KLINQIYHKYNNKQYPFIFLNLKLNKYSTDINVTPNKRTIFCTQQNLILATLKYSLISKW 286
Query: 62 AIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQS 121
+ + ++ +P S ++ I+R+ S P+ ++ + L +
Sbjct: 287 --------DKLQGNLTINPLSKLNF-GIKRTIS----------PTNEDRSIKRLHKLNEI 327
Query: 122 PETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQL--KARYARRTVQAQDRC 179
+ + D I DM L S + +S+ I+ +L K + V +
Sbjct: 328 SDINQYDNSQNNISY--DMKILN-----SIEMPISILTIKQKLQEKQNILPKYVTSNTTI 380
Query: 180 VENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHAT 239
+F A ++ ++N +AE+EL + K F KM+I+GQFNLGFII + DLFIIDQHA+
Sbjct: 381 ---KFKAKMEANENSKAENELKTQLTKDSFFKMEIIGQFNLGFIITRLKEDLFIIDQHAS 437
Query: 240 DEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGN- 298
DEKY FE L T +K+QKL++P+ L+++ +N+ IL ++ F NGF F +S +
Sbjct: 438 DEKYRFEKLNNETQLKTQKLIIPKFLNISAVNETILIEHQKTFEDNGFFFKINSKAEFGH 497
Query: 299 -VLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEH----CRPSRIRAMFASRACRKSVMI 353
+ LT +P+S G+EDIEEL+F+++ RPSR+R M ASRACR +VMI
Sbjct: 498 RIQLTGIPVSGYWQFGQEDIEELIFLIREGGVENKEKNIFRPSRVRQMLASRACRGAVMI 557
Query: 354 GRALSVGEMTGLVRNMGRIDQPW 376
G+AL+ +M L+ M ++ PW
Sbjct: 558 GKALNNSDMQKLIAQMAQMKNPW 580
>gi|121583910|ref|NP_032912.2| mismatch repair endonuclease PMS2 [Mus musculus]
gi|148687085|gb|EDL19032.1| postmeiotic segregation increased 2 (S. cerevisiae), isoform CRA_d
[Mus musculus]
gi|223461565|gb|AAI41288.1| Postmeiotic segregation increased 2 (S. cerevisiae) [Mus musculus]
Length = 859
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 108/198 (54%), Positives = 142/198 (71%), Gaps = 7/198 (3%)
Query: 183 RFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEK 242
+F A I P +N+ AE EL + I KSMF +M+I+GQFNLGFI+ K DLF++DQHA DEK
Sbjct: 644 KFRAKICPGENQAAEDELRKEISKSMFAEMEILGQFNLGFIVTKLKEDLFLVDQHAADEK 703
Query: 243 YNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVL-- 300
YNFE LQ+ T++++Q+L+ PQ L+LT +N+ +L +NL +F KNGF+F D +D V
Sbjct: 704 YNFEMLQQHTVLQAQRLITPQTLNLTAVNEAVLIENLEIFRKNGFDFVID--EDAPVTER 761
Query: 301 --LTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALS 358
L SLP SKN T G +DI+EL+FML + CRPSR+R MFASRACRKSVMIG AL+
Sbjct: 762 AKLISLPTSKNWTFGPQDIDELIFMLSDSPGV-MCRPSRVRQMFASRACRKSVMIGTALN 820
Query: 359 VGEMTGLVRNMGRIDQPW 376
EM L+ +MG +D PW
Sbjct: 821 ASEMKKLITHMGEMDHPW 838
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/111 (46%), Positives = 71/111 (63%), Gaps = 13/111 (11%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
KLVNEVYH +N HQYPF++LN+ + + VD+NVTPDKRQI + EKLLLA +K +
Sbjct: 304 KLVNEVYHMYNRHQYPFVVLNVSVDSECVDINVTPDKRQILLQEEKLLLAVLKTSL---- 359
Query: 62 AIG-FTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPS-EDNS 110
IG F D N +N + Q P DV+ + + ++ E+E PVP +DNS
Sbjct: 360 -IGMFDSDANKLN--VNQQPLLDVEGNLV-KLHTAELEK---PVPGKQDNS 403
>gi|148687082|gb|EDL19029.1| postmeiotic segregation increased 2 (S. cerevisiae), isoform CRA_a
[Mus musculus]
Length = 676
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 108/198 (54%), Positives = 142/198 (71%), Gaps = 7/198 (3%)
Query: 183 RFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEK 242
+F A I P +N+ AE EL + I KSMF +M+I+GQFNLGFI+ K DLF++DQHA DEK
Sbjct: 461 KFRAKICPGENQAAEDELRKEISKSMFAEMEILGQFNLGFIVTKLKEDLFLVDQHAADEK 520
Query: 243 YNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVL-- 300
YNFE LQ+ T++++Q+L+ PQ L+LT +N+ +L +NL +F KNGF+F D +D V
Sbjct: 521 YNFEMLQQHTVLQAQRLITPQTLNLTAVNEAVLIENLEIFRKNGFDFVID--EDAPVTER 578
Query: 301 --LTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALS 358
L SLP SKN T G +DI+EL+FML + CRPSR+R MFASRACRKSVMIG AL+
Sbjct: 579 AKLISLPTSKNWTFGPQDIDELIFMLSDSPGV-MCRPSRVRQMFASRACRKSVMIGTALN 637
Query: 359 VGEMTGLVRNMGRIDQPW 376
EM L+ +MG +D PW
Sbjct: 638 ASEMKKLITHMGEMDHPW 655
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/111 (46%), Positives = 71/111 (63%), Gaps = 13/111 (11%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
KLVNEVYH +N HQYPF++LN+ + + VD+NVTPDKRQI + EKLLLA +K +
Sbjct: 121 KLVNEVYHMYNRHQYPFVVLNVSVDSECVDINVTPDKRQILLQEEKLLLAVLKTSL---- 176
Query: 62 AIG-FTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPS-EDNS 110
IG F D N +N + Q P DV+ + + ++ E+E PVP +DNS
Sbjct: 177 -IGMFDSDANKLN--VNQQPLLDVEGNLV-KLHTAELEK---PVPGKQDNS 220
>gi|440899911|gb|ELR51153.1| Mismatch repair endonuclease PMS2 [Bos grunniens mutus]
Length = 864
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 108/196 (55%), Positives = 139/196 (70%), Gaps = 3/196 (1%)
Query: 183 RFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEK 242
+F A I P N+ AE EL + I K+MF +M+I+GQFNLGFII K ++D+FI+DQHATDEK
Sbjct: 649 KFRAKICPGDNQAAEDELRKEISKTMFAEMEIIGQFNLGFIITKLNADIFIVDQHATDEK 708
Query: 243 YNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFD--SSDDGNVL 300
YNFE LQ+ T+++ Q+L+ PQ L LT +N+ IL +NL +F KNGF+F D +
Sbjct: 709 YNFEMLQQHTVLQGQRLIAPQTLSLTAVNEAILIENLEIFRKNGFDFVIDEHAPVTERAK 768
Query: 301 LTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVG 360
L SLP SKN T G +DI+ELLFML + CRPSR+R MFASRACRKSVMIG L+
Sbjct: 769 LISLPTSKNWTFGPQDIDELLFMLSDSPGV-MCRPSRVRQMFASRACRKSVMIGTPLNTS 827
Query: 361 EMTGLVRNMGRIDQPW 376
EM L+ +MG +D PW
Sbjct: 828 EMKKLITHMGEMDHPW 843
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 66/109 (60%), Gaps = 12/109 (11%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
+LVNEVYH +N HQYPF++LN+ + VD+NVTPDKRQI + EKLLLA +K +
Sbjct: 304 RLVNEVYHMYNRHQYPFVVLNVSVDSACVDINVTPDKRQILLQEEKLLLAVLKTSL---- 359
Query: 62 AIG-FTVDGNNMNQSMEQDPSSDVDMEKIQRSNSE----EVEHETIPVP 105
IG F D N + S Q P DV+ I+R ++E E E + P P
Sbjct: 360 -IGMFESDVNKLQVS--QQPLLDVEGHLIKRPSAEMEKPEPEKKDDPAP 405
>gi|126334368|ref|XP_001377577.1| PREDICTED: mismatch repair endonuclease PMS2-like [Monodelphis
domestica]
Length = 989
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 114/206 (55%), Positives = 145/206 (70%), Gaps = 6/206 (2%)
Query: 173 VQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLF 232
V+AQ+ RF A I P +N+ AE EL + I K MF +M+I+GQFNLGFII K + DLF
Sbjct: 767 VKAQNY---RRFRAKISPGENQAAEDELRKEISKDMFAEMEIIGQFNLGFIITKLNEDLF 823
Query: 233 IIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFD 292
IIDQHATDEKYNFE LQ T+++ Q+L++PQ L+LT +N+ IL +NL +F KNGF+F D
Sbjct: 824 IIDQHATDEKYNFEMLQLHTVLQGQRLIMPQTLNLTAVNEAILIENLEIFRKNGFDFIID 883
Query: 293 --SSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKS 350
+ V L SLP SKN T G +DI+E++FML CRPSR+R MFASRACRKS
Sbjct: 884 EHAPVTERVKLISLPTSKNWTFGPQDIDEMIFMLSDCPGV-MCRPSRVRQMFASRACRKS 942
Query: 351 VMIGRALSVGEMTGLVRNMGRIDQPW 376
VMIG AL+ EM L+ +MG I+ PW
Sbjct: 943 VMIGTALNKNEMKKLITHMGEIEHPW 968
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 45/63 (71%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
++VNEVYH +N HQYPF++LNI + + VD+NVTPDKRQI + EK LLA +K + +
Sbjct: 427 RIVNEVYHLYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKFLLAVLKTSLIGMF 486
Query: 62 AIG 64
G
Sbjct: 487 DSG 489
>gi|148687084|gb|EDL19031.1| postmeiotic segregation increased 2 (S. cerevisiae), isoform CRA_c
[Mus musculus]
Length = 850
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 108/198 (54%), Positives = 142/198 (71%), Gaps = 7/198 (3%)
Query: 183 RFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEK 242
+F A I P +N+ AE EL + I KSMF +M+I+GQFNLGFI+ K DLF++DQHA DEK
Sbjct: 635 KFRAKICPGENQAAEDELRKEISKSMFAEMEILGQFNLGFIVTKLKEDLFLVDQHAADEK 694
Query: 243 YNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVL-- 300
YNFE LQ+ T++++Q+L+ PQ L+LT +N+ +L +NL +F KNGF+F D +D V
Sbjct: 695 YNFEMLQQHTVLQAQRLITPQTLNLTAVNEAVLIENLEIFRKNGFDFVID--EDAPVTER 752
Query: 301 --LTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALS 358
L SLP SKN T G +DI+EL+FML + CRPSR+R MFASRACRKSVMIG AL+
Sbjct: 753 AKLISLPTSKNWTFGPQDIDELIFMLSDSPGV-MCRPSRVRQMFASRACRKSVMIGTALN 811
Query: 359 VGEMTGLVRNMGRIDQPW 376
EM L+ +MG +D PW
Sbjct: 812 ASEMKKLITHMGEMDHPW 829
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/111 (46%), Positives = 71/111 (63%), Gaps = 13/111 (11%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
KLVNEVYH +N HQYPF++LN+ + + VD+NVTPDKRQI + EKLLLA +K +
Sbjct: 295 KLVNEVYHMYNRHQYPFVVLNVSVDSECVDINVTPDKRQILLQEEKLLLAVLKTSL---- 350
Query: 62 AIG-FTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPS-EDNS 110
IG F D N +N + Q P DV+ + + ++ E+E PVP +DNS
Sbjct: 351 -IGMFDSDANKLN--VNQQPLLDVEGNLV-KLHTAELEK---PVPGKQDNS 394
>gi|114612035|ref|XP_001141671.1| PREDICTED: mismatch repair endonuclease PMS2 isoform 2 [Pan
troglodytes]
Length = 862
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 105/196 (53%), Positives = 141/196 (71%), Gaps = 3/196 (1%)
Query: 183 RFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEK 242
+F A I P +N+ AE EL + I K+MF +M+I+GQFNLGFII K + D+FI+DQHATDEK
Sbjct: 647 KFRAKICPGENQAAEDELRKEISKTMFAEMEIIGQFNLGFIITKLNEDIFIVDQHATDEK 706
Query: 243 YNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSD--DGNVL 300
YNFE LQ+ T+++ Q+L+ PQ L+LT +N+ +L +NL +F KNGF+F D +
Sbjct: 707 YNFEMLQQHTVLQGQRLIAPQTLNLTAVNEAVLIENLEIFRKNGFDFVIDENAPVTERAK 766
Query: 301 LTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVG 360
L SLP SKN T G +D++EL+FML + CRPSR++ MFASRACRKSVMIG AL+
Sbjct: 767 LISLPTSKNWTFGPQDVDELIFMLSDSPGV-MCRPSRVKQMFASRACRKSVMIGTALNTS 825
Query: 361 EMTGLVRNMGRIDQPW 376
EM L+ +MG +D PW
Sbjct: 826 EMKKLITHMGEMDHPW 841
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 57/85 (67%), Gaps = 8/85 (9%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
+LVNEVYH +N HQYPF++LNI + + VD+NVTPDKRQI + EKLLLA +K +
Sbjct: 304 RLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSL---- 359
Query: 62 AIG-FTVDGNNMNQSMEQDPSSDVD 85
IG F D N +N S Q P DV+
Sbjct: 360 -IGMFDSDVNKLNVS--QQPLLDVE 381
>gi|410253448|gb|JAA14691.1| PMS2 postmeiotic segregation increased 2 [Pan troglodytes]
Length = 862
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 105/196 (53%), Positives = 141/196 (71%), Gaps = 3/196 (1%)
Query: 183 RFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEK 242
+F A I P +N+ AE EL + I K+MF +M+I+GQFNLGFII K + D+FI+DQHATDEK
Sbjct: 647 KFRAKICPGENQAAEDELRKEISKTMFAEMEIIGQFNLGFIITKLNEDIFIVDQHATDEK 706
Query: 243 YNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSD--DGNVL 300
YNFE LQ+ T+++ Q+L+ PQ L+LT +N+ +L +NL +F KNGF+F D +
Sbjct: 707 YNFEMLQQHTVLQGQRLIAPQTLNLTAVNEAVLIENLEIFRKNGFDFVIDENAPVTERAK 766
Query: 301 LTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVG 360
L SLP SKN T G +D++EL+FML + CRPSR++ MFASRACRKSVMIG AL+
Sbjct: 767 LISLPTSKNWTFGPQDVDELIFMLSDSPGV-MCRPSRVKQMFASRACRKSVMIGTALNTS 825
Query: 361 EMTGLVRNMGRIDQPW 376
EM L+ +MG +D PW
Sbjct: 826 EMKKLITHMGEMDHPW 841
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 57/85 (67%), Gaps = 8/85 (9%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
+LVNEVYH +N HQYPF++LNI + + VD+NVTPDKRQI + EKLLLA +K +
Sbjct: 304 RLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSL---- 359
Query: 62 AIG-FTVDGNNMNQSMEQDPSSDVD 85
IG F D N +N S Q P DV+
Sbjct: 360 -IGMFDSDVNKLNVS--QQPLLDVE 381
>gi|410253450|gb|JAA14692.1| PMS2 postmeiotic segregation increased 2 [Pan troglodytes]
Length = 862
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 105/196 (53%), Positives = 141/196 (71%), Gaps = 3/196 (1%)
Query: 183 RFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEK 242
+F A I P +N+ AE EL + I K+MF +M+I+GQFNLGFII K + D+FI+DQHATDEK
Sbjct: 647 KFRAKICPGENQAAEDELRKEISKTMFAEMEIIGQFNLGFIITKLNEDIFIVDQHATDEK 706
Query: 243 YNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSD--DGNVL 300
YNFE LQ+ T+++ Q+L+ PQ L+LT +N+ +L +NL +F KNGF+F D +
Sbjct: 707 YNFEMLQQHTVLQGQRLIAPQTLNLTAVNEAVLIENLEIFRKNGFDFVIDENAPVTERAK 766
Query: 301 LTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVG 360
L SLP SKN T G +D++EL+FML + CRPSR++ MFASRACRKSVMIG AL+
Sbjct: 767 LISLPTSKNWTFGPQDVDELIFMLSDSPGV-MCRPSRVKQMFASRACRKSVMIGTALNTS 825
Query: 361 EMTGLVRNMGRIDQPW 376
EM L+ +MG +D PW
Sbjct: 826 EMKKLITHMGEMDHPW 841
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 57/85 (67%), Gaps = 8/85 (9%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
+LVNEVYH +N HQYPF++LNI + + VD+NVTPDKRQI + EKLLLA +K +
Sbjct: 304 RLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSL---- 359
Query: 62 AIG-FTVDGNNMNQSMEQDPSSDVD 85
IG F D N +N S Q P DV+
Sbjct: 360 -IGMFDSDVNKLNVS--QQPLLDVE 381
>gi|410253452|gb|JAA14693.1| PMS2 postmeiotic segregation increased 2 [Pan troglodytes]
Length = 862
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 105/196 (53%), Positives = 141/196 (71%), Gaps = 3/196 (1%)
Query: 183 RFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEK 242
+F A I P +N+ AE EL + I K+MF +M+I+GQFNLGFII K + D+FI+DQHATDEK
Sbjct: 647 KFRAKICPGENQAAEDELRKEISKTMFAEMEIIGQFNLGFIITKLNEDIFIVDQHATDEK 706
Query: 243 YNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSD--DGNVL 300
YNFE LQ+ T+++ Q+L+ PQ L+LT +N+ +L +NL +F KNGF+F D +
Sbjct: 707 YNFEMLQQHTVLQGQRLIAPQTLNLTAVNEAVLIENLEIFRKNGFDFVIDENAPVTERAK 766
Query: 301 LTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVG 360
L SLP SKN T G +D++EL+FML + CRPSR++ MFASRACRKSVMIG AL+
Sbjct: 767 LISLPTSKNWTFGPQDVDELIFMLSDSPGV-MCRPSRVKQMFASRACRKSVMIGTALNTS 825
Query: 361 EMTGLVRNMGRIDQPW 376
EM L+ +MG +D PW
Sbjct: 826 EMKKLITHMGEMDHPW 841
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 57/85 (67%), Gaps = 8/85 (9%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
+LVNEVYH +N HQYPF++LNI + + VD+NVTPDKRQI + EKLLLA +K +
Sbjct: 304 RLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSL---- 359
Query: 62 AIG-FTVDGNNMNQSMEQDPSSDVD 85
IG F D N +N S Q P DV+
Sbjct: 360 -IGMFDSDVNKLNVS--QQPLLDVE 381
>gi|317373266|sp|P54278.2|PMS2_HUMAN RecName: Full=Mismatch repair endonuclease PMS2; AltName: Full=DNA
mismatch repair protein PMS2; AltName: Full=PMS1 protein
homolog 2
gi|41350089|gb|AAS00390.1| unknown [Homo sapiens]
Length = 862
Score = 224 bits (572), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 105/196 (53%), Positives = 141/196 (71%), Gaps = 3/196 (1%)
Query: 183 RFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEK 242
+F A I P +N+ AE EL + I K+MF +M+I+GQFNLGFII K + D+FI+DQHATDEK
Sbjct: 647 KFRAKICPGENQAAEDELRKEISKTMFAEMEIIGQFNLGFIITKLNEDIFIVDQHATDEK 706
Query: 243 YNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSD--DGNVL 300
YNFE LQ+ T+++ Q+L+ PQ L+LT +N+ +L +NL +F KNGF+F D +
Sbjct: 707 YNFEMLQQHTVLQGQRLIAPQTLNLTAVNEAVLIENLEIFRKNGFDFVIDENAPVTERAK 766
Query: 301 LTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVG 360
L SLP SKN T G +D++EL+FML + CRPSR++ MFASRACRKSVMIG AL+
Sbjct: 767 LISLPTSKNWTFGPQDVDELIFMLSDSPGV-MCRPSRVKQMFASRACRKSVMIGTALNTS 825
Query: 361 EMTGLVRNMGRIDQPW 376
EM L+ +MG +D PW
Sbjct: 826 EMKKLITHMGEMDHPW 841
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 57/85 (67%), Gaps = 8/85 (9%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
+LVNEVYH +N HQYPF++LNI + + VD+NVTPDKRQI + EKLLLA +K +
Sbjct: 304 RLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSL---- 359
Query: 62 AIG-FTVDGNNMNQSMEQDPSSDVD 85
IG F D N +N S Q P DV+
Sbjct: 360 -IGMFDSDVNKLNVS--QQPLLDVE 381
>gi|62739886|gb|AAH93921.1| PMS2 postmeiotic segregation increased 2 (S. cerevisiae) [Homo
sapiens]
Length = 862
Score = 224 bits (571), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 105/196 (53%), Positives = 141/196 (71%), Gaps = 3/196 (1%)
Query: 183 RFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEK 242
+F A I P +N+ AE EL + I K+MF +M+I+GQFNLGFII K + D+FI+DQHATDEK
Sbjct: 647 KFRAKICPGENQAAEDELRKEISKTMFAEMEIIGQFNLGFIITKLNEDIFIVDQHATDEK 706
Query: 243 YNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSD--DGNVL 300
YNFE LQ+ T+++ Q+L+ PQ L+LT +N+ +L +NL +F KNGF+F D +
Sbjct: 707 YNFEMLQQHTVLQGQRLIAPQTLNLTAVNEAVLIENLEIFRKNGFDFVIDENAPVTERAK 766
Query: 301 LTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVG 360
L SLP SKN T G +D++EL+FML + CRPSR++ MFASRACRKSVMIG AL+
Sbjct: 767 LISLPTSKNWTFGPQDVDELIFMLSDSPGV-MCRPSRVKQMFASRACRKSVMIGTALNTS 825
Query: 361 EMTGLVRNMGRIDQPW 376
EM L+ +MG +D PW
Sbjct: 826 EMKKLITHMGEMDHPW 841
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 57/85 (67%), Gaps = 8/85 (9%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
+LVNEVYH +N HQYPF++LNI + + VD+NVTPDKRQI + EKLLLA +K +
Sbjct: 304 RLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSL---- 359
Query: 62 AIG-FTVDGNNMNQSMEQDPSSDVD 85
IG F D N +N S Q P DV+
Sbjct: 360 -IGMFDSDVNKLNVS--QQPLLDVE 381
>gi|557470|gb|AAA50390.1| similar to S. cerevisiae PMS1 Swiss-Prot Accession Number P14242,
S. cerevisiae MLH1 GenBank Accession Number U07187, E.
coli MUTL Swiss-Prot Accession Number P23367, Salmonella
typhimurium MUTL Swiss-Prot Accession Number P14161,
Streptococcus pneumoniae Swiss-Prot Accession Number
P14160 [Homo sapiens]
gi|189065468|dbj|BAG35307.1| unnamed protein product [Homo sapiens]
gi|306921511|dbj|BAJ17835.1| PMS2 postmeiotic segregation increased 2 [synthetic construct]
Length = 862
Score = 224 bits (571), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 105/196 (53%), Positives = 141/196 (71%), Gaps = 3/196 (1%)
Query: 183 RFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEK 242
+F A I P +N+ AE EL + I K+MF +M+I+GQFNLGFII K + D+FI+DQHATDEK
Sbjct: 647 KFRAKICPGENQAAEDELRKEISKTMFAEMEIIGQFNLGFIITKLNEDIFIVDQHATDEK 706
Query: 243 YNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSD--DGNVL 300
YNFE LQ+ T+++ Q+L+ PQ L+LT +N+ +L +NL +F KNGF+F D +
Sbjct: 707 YNFEMLQQHTVLQGQRLIAPQTLNLTAVNEAVLIENLEIFRKNGFDFVIDENAPVTERAK 766
Query: 301 LTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVG 360
L SLP SKN T G +D++EL+FML + CRPSR++ MFASRACRKSVMIG AL+
Sbjct: 767 LISLPTSKNWTFGPQDVDELIFMLSDSPGV-MCRPSRVKQMFASRACRKSVMIGTALNTS 825
Query: 361 EMTGLVRNMGRIDQPW 376
EM L+ +MG +D PW
Sbjct: 826 EMKKLITHMGEMDHPW 841
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 57/85 (67%), Gaps = 8/85 (9%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
+LVNEVYH +N HQYPF++LNI + + VD+NVTPDKRQI + EKLLLA +K +
Sbjct: 304 RLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSL---- 359
Query: 62 AIG-FTVDGNNMNQSMEQDPSSDVD 85
IG F D N +N S Q P DV+
Sbjct: 360 -IGMFDSDVNKLNVS--QQPLLDVE 381
>gi|58737041|dbj|BAD89429.1| postmeiotic segregation increased 2 nirs variant 5 [Homo sapiens]
Length = 756
Score = 224 bits (571), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 105/196 (53%), Positives = 141/196 (71%), Gaps = 3/196 (1%)
Query: 183 RFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEK 242
+F A I P +N+ AE EL + I K+MF +M+I+GQFNLGFII K + D+FI+DQHATDEK
Sbjct: 541 KFRAKICPGENQAAEDELRKEISKTMFAEMEIIGQFNLGFIITKLNEDIFIVDQHATDEK 600
Query: 243 YNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSD--DGNVL 300
YNFE LQ+ T+++ Q+L+ PQ L+LT +N+ +L +NL +F KNGF+F D +
Sbjct: 601 YNFEMLQQHTVLQGQRLIAPQTLNLTAVNEAVLIENLEIFRKNGFDFVIDENAPVTERAK 660
Query: 301 LTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVG 360
L SLP SKN T G +D++EL+FML + CRPSR++ MFASRACRKSVMIG AL+
Sbjct: 661 LISLPTSKNWTFGPQDVDELIFMLSDSPGV-MCRPSRVKQMFASRACRKSVMIGTALNTS 719
Query: 361 EMTGLVRNMGRIDQPW 376
EM L+ +MG +D PW
Sbjct: 720 EMKKLITHMGEMDHPW 735
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 57/85 (67%), Gaps = 8/85 (9%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
+LVNEVYH +N HQYPF++LNI + + VD+NVTPDKRQI + EKLLLA +K +
Sbjct: 198 RLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSL---- 253
Query: 62 AIG-FTVDGNNMNQSMEQDPSSDVD 85
IG F D N +N S Q P DV+
Sbjct: 254 -IGMFDSDVNKLNVS--QQPLLDVE 275
>gi|4505913|ref|NP_000526.1| mismatch repair endonuclease PMS2 isoform a [Homo sapiens]
gi|535515|gb|AAA63923.1| homolog of yeast mutL gene [Homo sapiens]
gi|746341|prf||2017356B PMS2 gene
Length = 862
Score = 224 bits (571), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 105/196 (53%), Positives = 141/196 (71%), Gaps = 3/196 (1%)
Query: 183 RFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEK 242
+F A I P +N+ AE EL + I K+MF +M+I+GQFNLGFII K + D+FI+DQHATDEK
Sbjct: 647 KFRAKICPGENQAAEDELRKEISKTMFAEMEIIGQFNLGFIITKLNEDIFIVDQHATDEK 706
Query: 243 YNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSD--DGNVL 300
YNFE LQ+ T+++ Q+L+ PQ L+LT +N+ +L +NL +F KNGF+F D +
Sbjct: 707 YNFEMLQQHTVLQGQRLIAPQTLNLTAVNEAVLIENLEIFRKNGFDFVIDENAPVTERAK 766
Query: 301 LTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVG 360
L SLP SKN T G +D++EL+FML + CRPSR++ MFASRACRKSVMIG AL+
Sbjct: 767 LISLPTSKNWTFGPQDVDELIFMLSDSPGV-MCRPSRVKQMFASRACRKSVMIGTALNTS 825
Query: 361 EMTGLVRNMGRIDQPW 376
EM L+ +MG +D PW
Sbjct: 826 EMKKLITHMGEMDHPW 841
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 57/85 (67%), Gaps = 8/85 (9%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
+LVNEVYH +N HQYPF++LNI + + VD+NVTPDKRQI + EKLLLA +K +
Sbjct: 304 RLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSL---- 359
Query: 62 AIG-FTVDGNNMNQSMEQDPSSDVD 85
IG F D N +N S Q P DV+
Sbjct: 360 -IGMFDSDVNKLNVS--QQPLLDVE 381
>gi|198459330|ref|XP_001361342.2| GA20862 [Drosophila pseudoobscura pseudoobscura]
gi|198136656|gb|EAL25920.2| GA20862 [Drosophila pseudoobscura pseudoobscura]
Length = 881
Score = 224 bits (571), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 115/222 (51%), Positives = 149/222 (67%), Gaps = 6/222 (2%)
Query: 158 DIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQ 217
D ++ Q + + RRT R RF + I+P++N +AE EL R I K F +M I+GQ
Sbjct: 626 DSLRKQEQQQKERRTRAKLQRL---RFKSEINPNQNNKAEDELQREIAKDDFARMDIIGQ 682
Query: 218 FNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKD 277
FNLGFIIVK DLFI+DQHA+DEKYNFETLQ++T ++ Q+L VPQ L LT +N+ +L D
Sbjct: 683 FNLGFIIVKLQDDLFIVDQHASDEKYNFETLQRSTQLEYQRLTVPQCLDLTAVNEMVLID 742
Query: 278 NLPVFYKNGFEFSF--DSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRP 335
+LPVF KNGF+F ++ V L P S+ G+EDI+EL+FMLQ CRP
Sbjct: 743 HLPVFEKNGFKFEINHEAPATKKVRLLGKPYSRQWEFGKEDIDELIFMLQDAPEGTICRP 802
Query: 336 SRIRAMFASRACRKSVMIGRALS-VGEMTGLVRNMGRIDQPW 376
SR+R+MFASRACRKSVMIG AL+ M L+ MG I+QPW
Sbjct: 803 SRVRSMFASRACRKSVMIGTALNRTTTMRRLITQMGEIEQPW 844
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 63/108 (58%), Gaps = 5/108 (4%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K++NE YH++N Q PFI LNI +R VDVN+TPDKRQ+ +++E++LL +K + +++
Sbjct: 330 KVINETYHRYNVQQQPFIYLNIITARSDVDVNLTPDKRQLLLNNERILLLALKKSLLETF 389
Query: 62 A---IGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPS 106
F + + +E P E +++ E+ E E +P+ S
Sbjct: 390 GQTPSTFQMQNTTIVSMLEPRPKPQP--EDAGKASEEKDEEEDVPISS 435
>gi|321476952|gb|EFX87911.1| putative PMS1, postmeiotic segregation increased 2 protein [Daphnia
pulex]
Length = 814
Score = 224 bits (571), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 120/242 (49%), Positives = 159/242 (65%), Gaps = 22/242 (9%)
Query: 151 TPVTLSLDIIQDQLKA-RYARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMF 209
T V LD++ ++ +A R ++V E RF A I+P AE+EL+R I +S F
Sbjct: 560 TTVPFGLDLLMERNRAQRDLPKSV------TEKRFLARINPGDAAAAEAELSRQISQSDF 613
Query: 210 EKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTK 269
EKM++VGQFNLGFII + +SDLFIIDQHA DEKYNFETLQ+TT I+ QKLV P+ L+LT
Sbjct: 614 EKMEVVGQFNLGFIIARLNSDLFIIDQHAADEKYNFETLQRTTRIQPQKLVCPKPLNLTA 673
Query: 270 INQCILKDNLPVFYKNGFEFSFDSSDD--GNVLLTSLPMSKNTTLGREDIEELLFMLQHT 327
N+ +L DN+ +F NGF+F + +D VLL+++P+S N LG DI+ELLFMLQ +
Sbjct: 674 ANESLLIDNMELFRSNGFDFVVNKDEDPTKRVLLSAVPLSGNWLLGPSDIDELLFMLQDS 733
Query: 328 -------------NSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQ 374
S RPSR+RAMFASRACRK+VM+G L+ +MT L+R M + Q
Sbjct: 734 PMNEEEDRSNVSQASLARYRPSRVRAMFASRACRKAVMVGDPLTSVQMTNLLRQMSNLKQ 793
Query: 375 PW 376
PW
Sbjct: 794 PW 795
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 45/60 (75%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
KLVNEVYH +N +QYP I+LNI +D+NVTPDKRQ+ + +EK+LLATVK + + Y
Sbjct: 302 KLVNEVYHSYNRNQYPSIVLNITTHSSEIDINVTPDKRQLMVANEKILLATVKASLNEIY 361
>gi|348568586|ref|XP_003470079.1| PREDICTED: mismatch repair endonuclease PMS2-like [Cavia porcellus]
Length = 861
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 106/196 (54%), Positives = 140/196 (71%), Gaps = 3/196 (1%)
Query: 183 RFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEK 242
+F A I P +N+ AE EL + I K+MF +M+I+GQFNLGFI+ K D+F++DQHA DEK
Sbjct: 646 KFRAKICPGENQAAEDELRKEISKTMFAEMEILGQFNLGFIVTKLKEDIFLVDQHAADEK 705
Query: 243 YNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSD--DGNVL 300
YNFE LQ+ T++++Q+L+ PQ L+LT +N+ IL +NL +F KNGF+F D S
Sbjct: 706 YNFEMLQQHTVLQAQRLISPQTLNLTAVNEAILIENLEIFRKNGFDFVIDESAPVTKRAK 765
Query: 301 LTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVG 360
L SLP SKN T G +DI+EL+FML + CRPSR+R MFASRACRKSVMIG AL+
Sbjct: 766 LISLPTSKNWTFGPQDIDELIFMLSDSPGV-MCRPSRVRQMFASRACRKSVMIGTALNTS 824
Query: 361 EMTGLVRNMGRIDQPW 376
EM L+ +MG +D PW
Sbjct: 825 EMKKLIVHMGEMDHPW 840
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 61/95 (64%), Gaps = 8/95 (8%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
+LVNEVYH +N HQYPF++LNI + + VD+NVTPDKRQI + EKLLLA +K +
Sbjct: 304 RLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAILKTSL---- 359
Query: 62 AIG-FTVDGNNMNQSMEQDPSSDVDMEKIQRSNSE 95
IG F D N + ++ Q P D++ I+ +E
Sbjct: 360 -IGMFDRDVNKL--TVSQQPLLDIEGNLIKMRAAE 391
>gi|194378162|dbj|BAG57831.1| unnamed protein product [Homo sapiens]
Length = 815
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 105/196 (53%), Positives = 140/196 (71%), Gaps = 3/196 (1%)
Query: 183 RFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEK 242
+F A I P +N+ AE EL + I K+MF +M+I+GQFNLGFII K + D+FI+DQHATDEK
Sbjct: 600 KFRAKICPGENQAAEDELRKEISKTMFAEMEIIGQFNLGFIITKLNEDIFIVDQHATDEK 659
Query: 243 YNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSD--DGNVL 300
YNFE LQ+ T+++ Q+L PQ L+LT +N+ +L +NL +F KNGF+F D +
Sbjct: 660 YNFEMLQQHTVLQGQRLTAPQTLNLTAVNEAVLIENLEIFRKNGFDFVIDENAPVTERAK 719
Query: 301 LTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVG 360
L SLP SKN T G +D++EL+FML + CRPSR++ MFASRACRKSVMIG AL+
Sbjct: 720 LISLPTSKNWTFGPQDVDELIFMLSDSPGV-MCRPSRVKQMFASRACRKSVMIGTALNTS 778
Query: 361 EMTGLVRNMGRIDQPW 376
EM L+ +MG +D PW
Sbjct: 779 EMKKLITHMGEMDHPW 794
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 57/85 (67%), Gaps = 8/85 (9%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
+LVNEVYH +N HQYPF++LNI + + VD+NVTPDKRQI + EKLLLA +K +
Sbjct: 257 RLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSL---- 312
Query: 62 AIG-FTVDGNNMNQSMEQDPSSDVD 85
IG F D N +N S Q P DV+
Sbjct: 313 -IGMFDSDVNKLNVS--QQPLLDVE 334
>gi|53133740|emb|CAG32199.1| hypothetical protein RCJMB04_19o6 [Gallus gallus]
Length = 871
Score = 221 bits (562), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 117/235 (49%), Positives = 153/235 (65%), Gaps = 12/235 (5%)
Query: 148 RQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVEN----RFHANIDPSKNKEAESELNRV 203
+++ P+ S+ + ++L R+ VQ Q +C E RF A I P +NK AE EL +
Sbjct: 622 KKTVPLEFSMKALAERL-----RKIVQQQQKCTETQNYRRFRAKISPGENKVAEDELRKE 676
Query: 204 IKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQ 263
I K MF KM+I L + +SDLFIIDQHATDEKYNFE LQ+ T+++ QKL+ PQ
Sbjct: 677 ISKEMFAKMEIHWPVQLRVYNSQVESDLFIIDQHATDEKYNFEMLQQHTVLQGQKLIAPQ 736
Query: 264 NLHLTKINQCILKDNLPVFYKNGFEFSFDSSD--DGNVLLTSLPMSKNTTLGREDIEELL 321
NL+LT +N+ +L +NL +F KNGF+F + + V L SLP SKN T G +DI+EL+
Sbjct: 737 NLNLTAVNETVLIENLEIFRKNGFDFVINENAPVTQRVKLISLPTSKNWTFGPQDIDELI 796
Query: 322 FMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
FML CRPSR+R MFASRACRKSVMIG AL+V EM LV +MG I+ PW
Sbjct: 797 FMLSDCPGV-MCRPSRVRQMFASRACRKSVMIGTALNVQEMKKLVTHMGEIEHPW 850
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 66/104 (63%), Gaps = 8/104 (7%)
Query: 1 MKLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
+KLVNEVYH +N HQYPFI+LNI + + VD+NVTPDKRQI + EKLLLA +K + +
Sbjct: 304 VKLVNEVYHLYNKHQYPFIVLNICVDSECVDINVTPDKRQILLQEEKLLLAILKTSLIEM 363
Query: 61 YAIGFTVDGNNMNQSM------EQDPSSDVDMEKIQRSNSEEVE 98
+ G V+ N+NQ++ + P D + ++ S+ E E
Sbjct: 364 F--GSDVNKLNVNQNLLDIVGNVKAPPGDAEKPWVEMSHHSETE 405
>gi|344239648|gb|EGV95751.1| Mismatch repair endonuclease PMS2 [Cricetulus griseus]
Length = 1055
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 120/250 (48%), Positives = 161/250 (64%), Gaps = 20/250 (8%)
Query: 137 IDDMPRLQGSYRQSTP-VTLSLDIIQ-----DQLKARYARRTVQAQDRCVEN-------R 183
ID PRL G++ S+ V +++ I + D + A+R Q Q + N +
Sbjct: 344 IDIPPRLLGTHNTSSAQVDVAVKIHKKVVHLDFSMSSLAKRMKQLQHQKQRNDSKQSYRK 403
Query: 184 FHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKY 243
F A I P +N+ AE EL + I KSMF +M+I+GQFNLGFII K DLF++DQHA DEKY
Sbjct: 404 FRAKICPGENQAAEDELRKEISKSMFAEMEILGQFNLGFIITKLKEDLFLVDQHAADEKY 463
Query: 244 NFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVL--- 300
NFE LQ+ T+++ Q+L+ PQ L+LT +N+ +L +NL +F KNGF+F D +D V
Sbjct: 464 NFEMLQQHTVLQVQRLITPQTLNLTAVNEAVLIENLEIFKKNGFDFVID--EDAPVTERA 521
Query: 301 -LTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSV 359
L SLP SKN T G +DI+EL+FML + CRPSR+R MFASRACRKSVMIG AL+
Sbjct: 522 KLISLPTSKNWTFGPQDIDELIFMLSDSPGV-MCRPSRVRQMFASRACRKSVMIGTALNT 580
Query: 360 GEMTGLVRNM 369
EM L+ +M
Sbjct: 581 SEMKKLITHM 590
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 70/147 (47%), Gaps = 27/147 (18%)
Query: 28 DSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIG-FTVDGNNMNQSMEQDPSSDVDM 86
+ VD+NVTPDKRQI + EKLLLA +K + IG F D N N + Q P D+
Sbjct: 84 ECVDINVTPDKRQILLQEEKLLLAILKTSL-----IGMFDSDANKFN--VNQQPLLDIKG 136
Query: 87 EKIQRSNSEEVEHETIPVPSEDNSNFSHE-----------ANLQQS----PETVEPDTPD 131
+ + ++ E+E+ PV + +S+ S + + L+++ P T
Sbjct: 137 NLV-KMHAAEIEN---PVSGKQDSSPSLKITADGKRVASISRLREAFSLHPTTEIKSWGP 192
Query: 132 ETIEVIDDMPRLQGSYRQSTPVTLSLD 158
ET E+ + P + + S P L LD
Sbjct: 193 ETPELRQNYPSQKRGVKSSCPSNLILD 219
>gi|358341825|dbj|GAA49406.1| DNA mismatch repair protein PMS2 [Clonorchis sinensis]
Length = 780
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 135/403 (33%), Positives = 199/403 (49%), Gaps = 48/403 (11%)
Query: 16 YPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMNQS 75
+PF +L ++M +VD+N+TPDKR + + HE+ +LA K + + N++
Sbjct: 364 FPFFVLMLQMPTGTVDINLTPDKRTLLLHHERYVLALTKAILVQTL-----FRNPNVHLP 418
Query: 76 MEQDPSSDVDMEKIQRSNSEEVEHETIPVPS------------EDNSNFSHEA------N 117
Q S +D I EH T+ P+ +D+ + A +
Sbjct: 419 SVQQSCSTLDQSVIGIPADCPSEHCTLSSPTLSVSSRKRTPFVDDSDRWGKRAATIDLTD 478
Query: 118 LQQSPETVEPDTP----------DETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKAR 167
+ +P TP E+ E++D +P + RQ V S+ ++
Sbjct: 479 QRSTPLRASHKTPPKSTNGVAGLGESFEIVDLLPTTETLSRQQASVHFSMSDLRAAWSTL 538
Query: 168 YARRTVQAQDRCVENRFH------------ANIDPSKNKEAESELNRVIKKSMFEKMKIV 215
RT + ++ F + ++N AESEL+ K+ F +++IV
Sbjct: 539 EDNRTTPVTEVASQHPFDDIDLVSNGEFSLGSFRSTENDTAESELSTYFDKATFNELQIV 598
Query: 216 GQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCIL 275
GQFNLGFI+ ++ DLFIIDQHA+DEKY FE L + Q LVVPQ L L+ + +L
Sbjct: 599 GQFNLGFIVARHAQDLFIIDQHASDEKYRFEQLFENYRFTCQPLVVPQALELSVAQEQLL 658
Query: 276 KDNLPVFYKNGFEFSFD--SSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHC 333
+NL VF KNGF F D S V L + PM + GR DIEE+LF+L + S C
Sbjct: 659 LNNLDVFAKNGFAFRVDENSPCGRQVQLVATPMLEGHIFGRSDIEEMLFVLSESCS-RRC 717
Query: 334 RPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
RPSR+R + ASRACR ++MIG AL +M +VRNMG + PW
Sbjct: 718 RPSRLRTILASRACRSAIMIGTALDHAKMQRIVRNMGTMVHPW 760
>gi|270003668|gb|EFA00116.1| hypothetical protein TcasGA2_TC002932 [Tribolium castaneum]
Length = 807
Score = 210 bits (535), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 105/184 (57%), Positives = 134/184 (72%), Gaps = 3/184 (1%)
Query: 195 EAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLI 254
+++ EL + I K F M ++GQFNLGFII K +DLFIIDQHATDEKYNFE LQ +T++
Sbjct: 603 KSQEELRKHISKEDFANMDVIGQFNLGFIITKLKNDLFIIDQHATDEKYNFEQLQASTVM 662
Query: 255 KSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGN--VLLTSLPMSKNTTL 312
++Q LV P+ L LT N+ +L +N +F KNGF F D S V LTS+P+SK+
Sbjct: 663 ENQVLVNPKPLQLTAGNESLLIENEDIFNKNGFTFKIDESAPCTQKVSLTSIPLSKSMVF 722
Query: 313 GREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRI 372
G++DIEE+LFMLQ +N T CRPSRIRAMFA+RACRKSVMIG+ LS +M LV +MG I
Sbjct: 723 GKQDIEEMLFMLQDSNHT-MCRPSRIRAMFATRACRKSVMIGKPLSKSDMRRLVNHMGEI 781
Query: 373 DQPW 376
+QPW
Sbjct: 782 EQPW 785
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 49/62 (79%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
+LVNE+Y Q+NN+QYPF+ LNI VDVNVTPDKRQ+F++ EK+LL+T+K + +++
Sbjct: 297 RLVNEIYKQYNNNQYPFVYLNITSKSSLVDVNVTPDKRQVFLEKEKVLLSTIKASLIEAF 356
Query: 62 AI 63
+
Sbjct: 357 KM 358
>gi|301112887|ref|XP_002998214.1| mismatch repair endonuclease pms1, putative [Phytophthora infestans
T30-4]
gi|262112508|gb|EEY70560.1| mismatch repair endonuclease pms1, putative [Phytophthora infestans
T30-4]
Length = 686
Score = 207 bits (528), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 140/388 (36%), Positives = 197/388 (50%), Gaps = 26/388 (6%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K +NEV+ Q+ Q P ILN + DVNVTPDKR+ F+ HE ++ K I Y
Sbjct: 287 KTLNEVWRQYEMKQKPACILNFLLPLGDYDVNVTPDKRETFVKHEAEIIDAFKTGINKLY 346
Query: 62 AIG---FTVDG--NNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEA 116
FTV Q V +E +Q N P + + A
Sbjct: 347 EPSRGTFTVQPLLTAFAQRFPAQKPKPVIVEILQPRNQRGAASAP-SSPEQILLDLRKSA 405
Query: 117 NLQQS----PETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRT 172
Q+ P TP+E D+M + + Y +++++ R+T
Sbjct: 406 KRQKLYSPLPSQAILSTPEEHAWSFDEMIKQRQQY------------FEEEVEYERKRKT 453
Query: 173 VQAQ-DRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDL 231
+ + + N + N+ A + L RV+KK F++M+++GQFNLGFII K +DL
Sbjct: 454 NRLKVPKTCSTSVDDNALETDNEVAAAALQRVLKKEDFKRMQVLGQFNLGFIIGKLGNDL 513
Query: 232 FIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSF 291
FIIDQHA+DEK+N+ETLQ+TT++ Q LV P L LT + ++ D+L VF KNGF F
Sbjct: 514 FIIDQHASDEKFNYETLQQTTVMHQQPLVRPLRLELTAGEEMVILDHLGVFTKNGFTFLV 573
Query: 292 DSSDDGN--VLLTSLPMSKNTTLGREDIEELLFMLQHTN-STEHCRPSRIRAMFASRACR 348
D + L SLP +K+T G EDI EL +L +T R ++ AMFASRACR
Sbjct: 574 DKDAPATKKLKLLSLPFTKHTQFGTEDIRELASLLMDAPMNTSTIRLPKVMAMFASRACR 633
Query: 349 KSVMIGRALSVGEMTGLVRNMGRIDQPW 376
S+MIG AL EM +VRN+ +DQPW
Sbjct: 634 SSIMIGTALHKEEMQKIVRNLSGLDQPW 661
>gi|58737035|dbj|BAD89426.1| postmeiotic segregation increased 2 nirs variant 2 [Homo sapiens]
Length = 461
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 96/179 (53%), Positives = 130/179 (72%), Gaps = 3/179 (1%)
Query: 200 LNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKL 259
L+ + K+MF +M+I+GQFNLGFII K + D+FI+DQHATDEKYNFE LQ+ T+++ Q+L
Sbjct: 263 LHNLFYKTMFAEMEIIGQFNLGFIITKLNEDIFIVDQHATDEKYNFEMLQQHTVLQGQRL 322
Query: 260 VVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSD--DGNVLLTSLPMSKNTTLGREDI 317
+ PQ L+LT +N+ +L +NL +F KNGF+F D + L SLP SKN T G +D+
Sbjct: 323 IAPQTLNLTAVNEAVLIENLEIFRKNGFDFVIDENAPVTERAKLISLPTSKNWTFGPQDV 382
Query: 318 EELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+EL+FML + CRPSR++ MFASRACRKSVMIG AL+ EM L+ +MG +D PW
Sbjct: 383 DELIFMLSDSPGV-MCRPSRVKQMFASRACRKSVMIGTALNTSEMKKLITHMGEMDHPW 440
>gi|325182796|emb|CCA17251.1| mismatch repair endonuclease pms1 putative [Albugo laibachii Nc14]
Length = 667
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 129/381 (33%), Positives = 204/381 (53%), Gaps = 33/381 (8%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K +++V+ QF QY +++ ++ +D+NVTPDKR +F E ++ +++ + +
Sbjct: 295 KAIHQVWRQFEVRQYANYVIDFQVPSQDLDLNVTPDKRTVFFRKENEMMESLQTQLLQIF 354
Query: 62 AIG---FTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANL 118
FTV + + ++ + ++ I RS EEV ++
Sbjct: 355 EPAKRIFTVQPLTEEKRSTPNTTTPIPLKAILRS-PEEVRPTSV---------------- 397
Query: 119 QQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDR 178
+P E + I + L+ Y +L +++ K RY + +
Sbjct: 398 --TPNDFETEIRPRKRAKIGTIEALEKVYTSEIVTGWTLSALRETRK-RYFKEVALGKVS 454
Query: 179 CVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDS-DLFIIDQH 237
E P + ++ L+RV +K F+ M+I+GQFNLGFII KY++ DLFIIDQH
Sbjct: 455 GREK-------PLEEASIDALLHRVFQKQDFQSMEIIGQFNLGFIIAKYNTKDLFIIDQH 507
Query: 238 ATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDG 297
A+DEK+ +E+LQ+TT+ Q LV PQ+L L+ + I+ D+L VF KNGF F D+
Sbjct: 508 ASDEKFRYESLQRTTIFHHQPLVHPQSLSLSSTEEMIILDHLQVFRKNGFTFEVDAQAQS 567
Query: 298 NVL-LTSLPMSKNTTLGREDIEELLFMLQ-HTNSTEHCRPSRIRAMFASRACRKSVMIGR 355
N L L SLP+SK T G +D+ EL+ +LQ + ++ E R S++ ++ ASRACR SVMIG
Sbjct: 568 NKLRLLSLPLSKETQFGVKDLFELVSLLQEYPSNVESLRLSKVASILASRACRSSVMIGT 627
Query: 356 ALSVGEMTGLVRNMGRIDQPW 376
ALS EMT +V + +DQPW
Sbjct: 628 ALSKAEMTRIVHQLTGLDQPW 648
>gi|256077973|ref|XP_002575273.1| DNA mismatch repair protein PMS2 [Schistosoma mansoni]
Length = 808
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 131/355 (36%), Positives = 192/355 (54%), Gaps = 35/355 (9%)
Query: 27 RDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMNQSMEQDPSSDVDM 86
R+SVD+N+TPDKR + + HE ++A K + + +D ++++Q+ D D
Sbjct: 464 RESVDINLTPDKRTLLLHHENYVMALTKAVLVKTLFNSSGMDISSLSQT-----KIDFDQ 518
Query: 87 EKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPDETIEVIDDMPRLQGS 146
+I +N +++ E+ DN NLQ +IEV M L+
Sbjct: 519 SQIV-TNCDQLNDESQVNCFSDN-------NLQ-------------SIEVNFSMENLRNQ 557
Query: 147 YRQSTPVTLSLDIIQDQLKARYARRTV--QAQDRCVE-NRFHANIDPSKNKEAESELNRV 203
++Q + S+ I + T D+ +E N +N+EAE+EL
Sbjct: 558 WKQ---ILYSIPISNNDNNLYNIPNTTDNSIDDKHIEENIMFGKFTSIENQEAENELTTY 614
Query: 204 IKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQ 263
KK F +K++GQFNLGFII +++ DLFIIDQHA+DEKY FE L + KSQ LVVPQ
Sbjct: 615 FKKETFNSLKVIGQFNLGFIIAQHNQDLFIIDQHASDEKYRFEQLSENYRFKSQPLVVPQ 674
Query: 264 NLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGN--VLLTSLPMSKNTTLGREDIEELL 321
L+LT N+ +L +NL VF +NGF F S + + L + PM +N DIEE+L
Sbjct: 675 KLNLTITNEQVLINNLDVFARNGFAFRIHSDEPAGQQISLVAAPMLENKLFSYRDIEEML 734
Query: 322 FMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
F+L T + CRPSR+R + ASR+CR +VMIG AL +M ++ NMG +D PW
Sbjct: 735 FVLSET-CNKKCRPSRLRDILASRSCRSAVMIGTALDHKKMKRILTNMGSMDHPW 788
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 59/118 (50%), Gaps = 1/118 (0%)
Query: 16 YPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMNQS 75
+P +IL M SVD+N+TPDKR + + HE ++A K + + +D ++++Q+
Sbjct: 358 FPVLILLFTMPTQSVDINLTPDKRTLLLHHENYVMALAKAVLVKTLFNSSGMDISSLSQT 417
Query: 76 MEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPD-TPDE 132
S + Q ++ +V + P+ +S S + + E+V+ + TPD+
Sbjct: 418 KIDFDQSQIVTNCDQLNDESQVNCVSTPIHKRHSSPVSDISCVSPKRESVDINLTPDK 475
>gi|340379225|ref|XP_003388127.1| PREDICTED: mismatch repair endonuclease PMS2-like [Amphimedon
queenslandica]
Length = 759
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 100/195 (51%), Positives = 133/195 (68%), Gaps = 3/195 (1%)
Query: 184 FHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKY 243
FHA I P N++AE EL R + K F++M+I+GQFNLGFII K D+DLFIIDQHATDEKY
Sbjct: 545 FHAKIRPDSNQDAEEELKRELNKEQFKEMEILGQFNLGFIIAKLDNDLFIIDQHATDEKY 604
Query: 244 NFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFD--SSDDGNVLL 301
NFE L++ T+++ Q L+ P + +T + + ++KDNL VF KNGF FSFD + V L
Sbjct: 605 NFERLKRDTVLEHQSLIHPLPVEVTAVGESVIKDNLEVFEKNGFRFSFDEEAPPTKRVKL 664
Query: 302 TSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGE 361
P+SKN ++G +IEEL+F+L E RP + M ASRACR S+MIG AL E
Sbjct: 665 IEQPVSKNWSMGTSEIEELIFLLTDYPG-EMVRPHCVTKMLASRACRGSIMIGTALGKKE 723
Query: 362 MTGLVRNMGRIDQPW 376
M+ +V +M +DQPW
Sbjct: 724 MSKIVAHMAEMDQPW 738
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 44/60 (73%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K VNEVYH FN HQYPFI+LNI R+SVDVNVTPDKRQ+ + EK LL +K + + +
Sbjct: 301 KTVNEVYHMFNPHQYPFIVLNISTQRESVDVNVTPDKRQVMLQEEKALLFFLKASLLEMF 360
>gi|141797000|gb|AAI39775.1| Pms2 protein [Mus musculus]
Length = 191
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 96/173 (55%), Positives = 126/173 (72%), Gaps = 7/173 (4%)
Query: 208 MFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHL 267
MF +M+I+GQFNLGFI+ K DLF++DQHA DEKYNFE LQ+ T++++Q+L+ PQ L+L
Sbjct: 1 MFAEMEILGQFNLGFIVTKLKEDLFLVDQHAADEKYNFEMLQQHTVLQAQRLITPQTLNL 60
Query: 268 TKINQCILKDNLPVFYKNGFEFSFDSSDDGNVL----LTSLPMSKNTTLGREDIEELLFM 323
T +N+ +L +NL +F KNGF+F D +D V L SLP SKN T G +DI+EL+FM
Sbjct: 61 TAVNEAVLIENLEIFRKNGFDFVID--EDAPVTERAKLISLPTSKNWTFGPQDIDELIFM 118
Query: 324 LQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
L + CRPSR+R MFASRACRKSVMIG AL+ EM L+ +MG +D PW
Sbjct: 119 LSDSPGV-MCRPSRVRQMFASRACRKSVMIGTALNASEMKKLITHMGEMDHPW 170
>gi|391332380|ref|XP_003740613.1| PREDICTED: mismatch repair endonuclease PMS2 [Metaseiulus
occidentalis]
Length = 841
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 101/199 (50%), Positives = 130/199 (65%), Gaps = 6/199 (3%)
Query: 183 RFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEK 242
RF A I P +N AESEL R I K MF+ M I+GQFN GFII K ++DLFI+DQHA DEK
Sbjct: 624 RFRARISPRENSTAESELMREITKDMFKDMDIIGQFNKGFIIAKLNTDLFIVDQHAADEK 683
Query: 243 YNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSD--DGNVL 300
+NFETLQ TT+I+SQ L +P L L N+ ++ +NLP+F KNGF S D +
Sbjct: 684 FNFETLQATTVIESQPLAIPLKLFLAPGNEQVVLENLPIFEKNGFRLSCDEDALCGRKLS 743
Query: 301 LTSLPMSKNTTLGREDIEELLFMLQ---HTNSTEHCRPSRIRAMFASRACRKSVMIGRAL 357
LT++P S +G DI+EL+FML H N +CRPS++RAMFA RACRKSVM+G L
Sbjct: 744 LTAVPQSGQWAMGASDIDELIFMLNENYHPNRM-NCRPSKVRAMFAMRACRKSVMVGHEL 802
Query: 358 SVGEMTGLVRNMGRIDQPW 376
+M +V + + PW
Sbjct: 803 RPRDMKRVVSQLSGLQHPW 821
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 42/57 (73%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHIT 58
+++N VYHQFN+ QYPF++LNI R VDVN+TPDKR + + E ++LA VK +T
Sbjct: 306 RVINGVYHQFNSSQYPFVMLNIMTPRHLVDVNLTPDKRMLMLQRENVILAMVKASLT 362
>gi|37051337|dbj|BAC81643.1| PMS2-C terminal -like [Homo sapiens]
Length = 191
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 93/171 (54%), Positives = 125/171 (73%), Gaps = 3/171 (1%)
Query: 208 MFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHL 267
MF +M+I+GQFNLGFII K + D+FI+DQHATDEKYNFE LQ+ T+++ Q+L+ PQ L+L
Sbjct: 1 MFAEMEIIGQFNLGFIITKLNEDIFIVDQHATDEKYNFEMLQQHTVLQGQRLIAPQTLNL 60
Query: 268 TKINQCILKDNLPVFYKNGFEFSFDSSD--DGNVLLTSLPMSKNTTLGREDIEELLFMLQ 325
T +N+ +L +NL +F KNGF+F D + L SLP SK+ T G +D++EL+FML
Sbjct: 61 TAVNEAVLIENLEIFRKNGFDFVIDENAPVTERAKLISLPTSKSWTFGPQDVDELIFMLS 120
Query: 326 HTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+ CRPSR++ MFASRACRKSVMIG AL+ EM L+ +MG +D PW
Sbjct: 121 DSPGV-MCRPSRVKQMFASRACRKSVMIGTALNTSEMKKLITHMGEMDHPW 170
>gi|195172650|ref|XP_002027109.1| GL20045 [Drosophila persimilis]
gi|194112922|gb|EDW34965.1| GL20045 [Drosophila persimilis]
Length = 290
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 97/172 (56%), Positives = 122/172 (70%), Gaps = 3/172 (1%)
Query: 212 MKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKIN 271
M I+GQFNLGFIIVK DLFI+DQHA+DEKYNFETLQ++T ++ Q+L VPQ+L LT +N
Sbjct: 1 MDIIGQFNLGFIIVKLQDDLFIVDQHASDEKYNFETLQRSTQLEYQRLTVPQSLDLTAVN 60
Query: 272 QCILKDNLPVFYKNGFEFSF--DSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNS 329
+ +L D+LPVF KNGF+F ++ V L P S+ G+EDI+EL+FMLQ
Sbjct: 61 EMVLIDHLPVFEKNGFKFEINHEAPATKKVRLLGKPYSRQWEFGKEDIDELIFMLQDAPE 120
Query: 330 TEHCRPSRIRAMFASRACRKSVMIGRALS-VGEMTGLVRNMGRIDQPWVSMG 380
CRPSR+R+MFASRACRKSVMIG AL+ M L+ MG I+QPW G
Sbjct: 121 GTICRPSRVRSMFASRACRKSVMIGTALNRTTTMRRLITQMGEIEQPWNRRG 172
>gi|196000426|ref|XP_002110081.1| hypothetical protein TRIADDRAFT_21244 [Trichoplax adhaerens]
gi|190588205|gb|EDV28247.1| hypothetical protein TRIADDRAFT_21244 [Trichoplax adhaerens]
Length = 832
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 91/199 (45%), Positives = 134/199 (67%), Gaps = 3/199 (1%)
Query: 180 VENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHAT 239
+ + FHA I P N AE+EL R I K MF++M+I+GQFNLGFII +++ DLFIIDQHA+
Sbjct: 606 IGSSFHATIAPDNNTAAENELRREISKDMFQEMEIIGQFNLGFIIARHNQDLFIIDQHAS 665
Query: 240 DEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSF--DSSDDG 297
DEKYN+E LQ T +K Q+L+ P++L LT + +L DN+ +F KNGF FS D+
Sbjct: 666 DEKYNYEYLQLNTNLKGQQLIQPKHLFLTPTEEEVLMDNVNIFEKNGFSFSIDPDAPPTK 725
Query: 298 NVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRAL 357
+ +TS+P + ED++E++ ML CRP+ + MFA+R+CR+S+MIG AL
Sbjct: 726 RIKMTSVPYGRGCIFNEEDVQEMIMMLTDMPGV-MCRPTTVSRMFATRSCRRSIMIGTAL 784
Query: 358 SVGEMTGLVRNMGRIDQPW 376
+ +M ++++MG I+ PW
Sbjct: 785 NTSQMKKILKHMGEIEHPW 803
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 55/98 (56%), Gaps = 9/98 (9%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVH----- 56
+++NE YH +N HQYPF L+I + + +VDVNVTPDKRQI M +EK LL +K
Sbjct: 297 RVINETYHMYNRHQYPFFALDISLRKGTVDVNVTPDKRQILMQNEKALLTVIKASLVRMY 356
Query: 57 --ITDSYAI--GFTVDGNNMNQSMEQDPSSDVDMEKIQ 90
I SY I G T QS D + + ++IQ
Sbjct: 357 DPIASSYEISRGITTGATTSTQSAAADQHDNENNDEIQ 394
>gi|240952144|ref|XP_002399323.1| DNA mismatch repair protein, putative [Ixodes scapularis]
gi|215490529|gb|EEC00172.1| DNA mismatch repair protein, putative [Ixodes scapularis]
Length = 837
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 106/224 (47%), Positives = 140/224 (62%), Gaps = 17/224 (7%)
Query: 166 ARYARRTVQAQ-DRCVEN------RFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQF 218
+R ++T ++Q D C E+ RF A I PS N AE+EL + I K MF +M+I+GQF
Sbjct: 598 SRLRQKTKESQNDGCSEHSKPASRRFRAAISPSDNAAAENELAKEISKDMFGQMEIIGQF 657
Query: 219 NLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDN 278
NLGFI+ K DLFI+DQHA DEKYNFE L++ T++K QKL+ PQ L LT +N+ +L +N
Sbjct: 658 NLGFIVAKLGDDLFIVDQHAADEKYNFERLERDTVMKGQKLLAPQPLELTAVNESVLIEN 717
Query: 279 LPVFYKNGFEFSFDSSDDGN--VLLTSLPMSKNTTLGREDIEEL---LFMLQHTNSTEHC 333
VF KNGF F D S V L S+P S + G+E L L QHT C
Sbjct: 718 REVFEKNGFAFEVDESQPSGRKVKLVSVPASGSWQFGKEGKCRLFRRLVYCQHTV----C 773
Query: 334 RPSRIRAMFASRACRKSVMIGRALSVGE-MTGLVRNMGRIDQPW 376
RPS++R MFASRACRKSVM+G L++ E +V ++G + PW
Sbjct: 774 RPSKVRQMFASRACRKSVMVGMPLTISESFFQVVSHLGELHHPW 817
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/53 (66%), Positives = 40/53 (75%)
Query: 3 LVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKV 55
LVN VYH FN QYPF+ +NI + R VDVNVTPDKR +F+ HEK LLA VKV
Sbjct: 297 LVNAVYHTFNRDQYPFLFINIHLQRRDVDVNVTPDKRSVFLHHEKHLLALVKV 349
>gi|392579672|gb|EIW72799.1| hypothetical protein TREMEDRAFT_25119, partial [Tremella
mesenterica DSM 1558]
Length = 897
Score = 194 bits (494), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 112/241 (46%), Positives = 153/241 (63%), Gaps = 20/241 (8%)
Query: 155 LSLDIIQDQLKARY-ARRT---VQAQDRCVENRFH-------ANIDPSKNKEAESELNRV 203
LSL +L++RY +RRT + + R V + A I+ AE+ L+RV
Sbjct: 622 LSLSFNYKRLQSRYPSRRTSLPISSASRDVHSALRQGGVTSAAGINNHDASSAEAALSRV 681
Query: 204 IKKSMFEKMKIVGQFNLGFIIVKY----DSDLFIIDQHATDEKYNFETLQKTTLIKSQKL 259
I K FE M+++GQFN GFII + DLFIIDQHA+DEKYNFETLQ+TT+IK+QKL
Sbjct: 682 ISKVDFEDMEVLGQFNKGFIIARLRRNESDDLFIIDQHASDEKYNFETLQRTTIIKAQKL 741
Query: 260 VVPQNLHLTKINQCILKDNLPVFYKNGFEFSF-DSSDDG---NVLLTSLPMSKNTTLGRE 315
+ P++L LT ++ ++L V NGFE + + G VLL+++P+SK TT +
Sbjct: 742 IKPRSLQLTAGDEITAMEHLDVLRNNGFEVKIVEDAPPGRGERVLLSAMPVSKETTFDVK 801
Query: 316 DIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQP 375
D+E+LL +L + R S+ RAMFA RACRKSVMIG+AL+ +MT L+RNMG IDQP
Sbjct: 802 DLEQLLHLLSEGGGPK-SRCSKARAMFAMRACRKSVMIGKALTKAQMTTLLRNMGTIDQP 860
Query: 376 W 376
W
Sbjct: 861 W 861
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 35/54 (64%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKV 55
+ +NEVY FN HQ P IL+ + +VD+NV+PDKR +F+ E L+ ++V
Sbjct: 299 RAINEVYKSFNTHQVPLAILDFTLPPMTVDINVSPDKRTVFLHSEMQLVEALRV 352
>gi|395852921|ref|XP_003804142.1| PREDICTED: LOW QUALITY PROTEIN: mismatch repair endonuclease PMS2
[Otolemur garnettii]
Length = 1037
Score = 194 bits (492), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 96/194 (49%), Positives = 129/194 (66%), Gaps = 4/194 (2%)
Query: 183 RFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEK 242
+F A I P +N+ AE EL + I K+MF +M+I+GQFNLGFII K + D+FI+DQHATDEK
Sbjct: 827 KFRAKICPGENQAAEDELRKEISKTMFAEMEIIGQFNLGFIITKLNEDIFIVDQHATDEK 886
Query: 243 YNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLT 302
YNFE LQ+ T+++ Q+L+ +++T I Q + F +N + + L
Sbjct: 887 YNFEMLQQHTILQGQRLIAXATIYITSIIQMKCISQIMDFSQNSILLAPVTE---RAKLI 943
Query: 303 SLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEM 362
SLP SKN T G +DI+EL+FML + CRPSR+R MFASRACRKSVMIG AL+ EM
Sbjct: 944 SLPTSKNWTFGPQDIDELIFMLSDSPGV-MCRPSRVRQMFASRACRKSVMIGTALNTSEM 1002
Query: 363 TGLVRNMGRIDQPW 376
L+ +MG +D PW
Sbjct: 1003 KKLITHMGEMDHPW 1016
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 61/95 (64%), Gaps = 8/95 (8%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
+LVNEVYH +N HQYPF++LNI + + VD+NVTPDKRQI + EKLLLA +K +
Sbjct: 483 RLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSL---- 538
Query: 62 AIG-FTVDGNNMNQSMEQDPSSDVDMEKIQRSNSE 95
IG F D N +N + Q P D++ I+ +E
Sbjct: 539 -IGMFDNDVNKLN--ISQQPLLDIEGNLIKMHAAE 570
>gi|326436264|gb|EGD81834.1| Pms2 protein [Salpingoeca sp. ATCC 50818]
Length = 934
Score = 194 bits (492), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 95/184 (51%), Positives = 128/184 (69%), Gaps = 3/184 (1%)
Query: 195 EAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLI 254
+AE EL+ I K F M+++GQFNLGFII + LFI+DQHA+DEKYNFE LQ+ T I
Sbjct: 718 DAEKELSTQISKDDFSDMQVIGQFNLGFIIARLHHHLFIVDQHASDEKYNFERLQQVTKI 777
Query: 255 KSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFD--SSDDGNVLLTSLPMSKNTTL 312
K Q L+ P+ L L +++ +L DNL +F +NGFEF+ D ++ V L+ +P SK T
Sbjct: 778 KRQVLIRPRPLDLPAVDENLLLDNLHIFQQNGFEFAVDEHAAPGKRVRLSQIPHSKGTEF 837
Query: 313 GREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRI 372
G +DI ELLFML+ CRPSRIR MFASRACR S+MIG+AL+ EM ++++MG +
Sbjct: 838 GIDDIHELLFMLRDQPGV-FCRPSRIRGMFASRACRSSIMIGKALTRPEMRAILQHMGTM 896
Query: 373 DQPW 376
+QPW
Sbjct: 897 EQPW 900
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 41/59 (69%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
+ VNE Y +N +QYPF++ ++ M + VDVNVTPDKR +F E+ LL T K+ IT++
Sbjct: 284 RAVNEAYRAYNKNQYPFVVAHLHMPQQEVDVNVTPDKRTLFFHKEQALLETTKLCITET 342
>gi|134109737|ref|XP_776418.1| hypothetical protein CNBC4730 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259094|gb|EAL21771.1| hypothetical protein CNBC4730 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1018
Score = 190 bits (483), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 100/200 (50%), Positives = 134/200 (67%), Gaps = 15/200 (7%)
Query: 192 KNKE---AESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDS------DLFIIDQHATDEK 242
KNK+ AE L+RVI K+ FEKM++ GQFN GFII + S DLFIIDQHA+DEK
Sbjct: 781 KNKDSELAEETLSRVISKADFEKMEVKGQFNKGFIIARLQSTDNGTDDLFIIDQHASDEK 840
Query: 243 YNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGN---- 298
YNFETLQ+TT IK+Q L+ P+ LHLT ++ + +N+ + NGF+ D S
Sbjct: 841 YNFETLQQTTKIKAQALIKPRALHLTAGDEIVAMENIDILNANGFDVHVDESKPAGKGER 900
Query: 299 VLLTSLPMSKNTTLGREDIEELLFMLQHTN--STEHCRPSRIRAMFASRACRKSVMIGRA 356
+ L ++P+SK T +D+E+LL +L + S + R + RAMFASRACRKSVMIG+
Sbjct: 901 ISLLAMPVSKETVFDFKDLEQLLHLLSDDSRPSGQMVRCMKARAMFASRACRKSVMIGKT 960
Query: 357 LSVGEMTGLVRNMGRIDQPW 376
L+ G+M+ L+RNMG IDQPW
Sbjct: 961 LTKGQMSQLLRNMGTIDQPW 980
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
+ +NEVY FN +Q P IL+ ++ +SVD+NV+PDKR IF+ E L+ ++K + +
Sbjct: 309 RAINEVYKSFNTNQLPLAILDFKIPTESVDINVSPDKRTIFVHSEDCLIDSLKTALESFF 368
Query: 62 AIG---FTVDG 69
A FTV+G
Sbjct: 369 APSRNTFTVEG 379
>gi|58264774|ref|XP_569543.1| ATPase [Cryptococcus neoformans var. neoformans JEC21]
gi|57225775|gb|AAW42236.1| ATPase, putative [Cryptococcus neoformans var. neoformans JEC21]
Length = 939
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 100/200 (50%), Positives = 134/200 (67%), Gaps = 15/200 (7%)
Query: 192 KNKE---AESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDS------DLFIIDQHATDEK 242
KNK+ AE L+RVI K+ FEKM++ GQFN GFII + S DLFIIDQHA+DEK
Sbjct: 702 KNKDSELAEETLSRVISKADFEKMEVKGQFNKGFIIARLQSTDNGTDDLFIIDQHASDEK 761
Query: 243 YNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGN---- 298
YNFETLQ+TT IK+Q L+ P+ LHLT ++ + +N+ + NGF+ D S
Sbjct: 762 YNFETLQQTTKIKAQALIKPRALHLTAGDEIVAMENIDILNANGFDVHVDESKPAGKGER 821
Query: 299 VLLTSLPMSKNTTLGREDIEELLFMLQHTN--STEHCRPSRIRAMFASRACRKSVMIGRA 356
+ L ++P+SK T +D+E+LL +L + S + R + RAMFASRACRKSVMIG+
Sbjct: 822 ISLLAMPVSKETVFDFKDLEQLLHLLSDDSRPSGQMVRCMKARAMFASRACRKSVMIGKT 881
Query: 357 LSVGEMTGLVRNMGRIDQPW 376
L+ G+M+ L+RNMG IDQPW
Sbjct: 882 LTKGQMSQLLRNMGTIDQPW 901
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 38/54 (70%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKV 55
+ +NEVY FN +Q P IL+ ++ +SVD+NV+PDKR IF+ E L+ ++KV
Sbjct: 309 RAINEVYKSFNTNQLPLAILDFKIPTESVDINVSPDKRTIFVHSEDCLIDSLKV 362
>gi|321253476|ref|XP_003192745.1| ATPase [Cryptococcus gattii WM276]
gi|317459214|gb|ADV20958.1| ATPase, putative [Cryptococcus gattii WM276]
Length = 1020
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 109/245 (44%), Positives = 150/245 (61%), Gaps = 23/245 (9%)
Query: 153 VTLSLDIIQDQLKARYARRT---VQAQDRCVENRFH-------ANIDPSKNKEAESELNR 202
VT+ D+ +L+ R+A V AQ R V R A I ++ AE L+R
Sbjct: 740 VTMRFDL--SRLRKRFANAGNHQVGAQKRRVSQRLKQGDLEEAAGIKNKDSELAEETLSR 797
Query: 203 VIKKSMFEKMKIVGQFNLGFIIVKYDSD-----LFIIDQHATDEKYNFETLQKTTLIKSQ 257
VI K+ FEKM++ GQFN GFII + SD LFIIDQHA+DEKYNFETLQ+TT IK+Q
Sbjct: 798 VISKADFEKMEVKGQFNKGFIIARLQSDNGTDDLFIIDQHASDEKYNFETLQQTTKIKAQ 857
Query: 258 KLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGN----VLLTSLPMSKNTTLG 313
L+ P+ LHLT ++ + +N+ + NGF+ D + + L ++P+SK T
Sbjct: 858 ALIKPRALHLTAGDEIVAMENIDILNANGFDVHVDETKPAGRGERISLLAIPVSKETVFD 917
Query: 314 REDIEELLFMLQHTN--STEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGR 371
+D+E+LL +L + S + R + RAMFASRACRKSVMIG+ L+ +M+ L+RNMG
Sbjct: 918 FKDLEQLLQLLSDDSRPSGQMVRCMKARAMFASRACRKSVMIGKTLTKSQMSQLLRNMGT 977
Query: 372 IDQPW 376
IDQPW
Sbjct: 978 IDQPW 982
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
+ +NEVY FN +Q P +IL+ ++ +SVD+NV+PDKR IF+ E L+ ++K + +
Sbjct: 309 RAINEVYKSFNTNQLPLVILDFKIPTESVDINVSPDKRTIFVHSEDCLIDSLKTALESFF 368
Query: 62 AIG---FTVDG 69
A FTV+G
Sbjct: 369 APSRNTFTVEG 379
>gi|428182631|gb|EKX51491.1| Pms1 mismatch repair mutL [Guillardia theta CCMP2712]
Length = 629
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 131/379 (34%), Positives = 188/379 (49%), Gaps = 64/379 (16%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K +NEVY +N HQYP LNI++S TD+Y
Sbjct: 277 KAINEVYKMYNMHQYPIYFLNIQLS-------------------------------TDTY 305
Query: 62 AIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQS 121
+ T D Q M D S ++ K N E IP P+ + H
Sbjct: 306 DVNVTPD---KRQIMFHDESRLIEFVKENLRNLFEPSRNNIPSPTA-SVELLH------- 354
Query: 122 PETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVE 181
P D P+ T E TL ++ + +K + + + + +
Sbjct: 355 PRNGHVDQPEPTGET-----------------TLQVEADWEAVKQKLRKDAEEGSEATEK 397
Query: 182 NRFHANIDPSKNKE-AESELN-RVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHAT 239
+ +N E A + L+ RVI KS F +MKI+GQFNLGFII + DSDLFI+DQHA
Sbjct: 398 LKREGRKRKRRNYEDAVTNLHERVISKSDFTRMKILGQFNLGFIIARLDSDLFILDQHAC 457
Query: 240 DEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFD--SSDDG 297
DEKY FE L++TT +KSQ LVVP+ L L ++ ++++NL VF NGFE D +
Sbjct: 458 DEKYRFELLEQTTSLKSQPLVVPKELELEAADEMLVQENLDVFRANGFELKIDEEAPPTK 517
Query: 298 NVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRAL 357
V LTS+P SK+T G D+ E+L +++ + + RPSR+RAM ASRAC +V IG+ L
Sbjct: 518 RVKLTSIPFSKSTVFGPADVHEMLCLMREDSGSAQ-RPSRVRAMLASRACHSAVTIGKHL 576
Query: 358 SVGEMTGLVRNMGRIDQPW 376
+ +M +V +M ++QPW
Sbjct: 577 TRQQMRVIVDHMSSMEQPW 595
>gi|393245221|gb|EJD52732.1| hypothetical protein AURDEDRAFT_55752, partial [Auricularia
delicata TFB-10046 SS5]
Length = 225
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 93/186 (50%), Positives = 134/186 (72%), Gaps = 5/186 (2%)
Query: 196 AESELNRVIKKSMFEKMKIVGQFNLGFIIVKY---DSDLFIIDQHATDEKYNFETLQKTT 252
AE++L+R+I K+ F +M+IVGQFNLGFII + D DLFIIDQHA+DEKYNFETLQ+TT
Sbjct: 3 AEAKLSRIIHKADFARMEIVGQFNLGFIIARLRDRDDDLFIIDQHASDEKYNFETLQQTT 62
Query: 253 LIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGN--VLLTSLPMSKNT 310
+++Q+L+ P+ L LT ++ + + + + KNGF+ + D + V LT++P+SKNT
Sbjct: 63 KMETQRLLRPRPLELTAADELLAMERIDILRKNGFDLTVDEDAPAHQRVRLTAVPVSKNT 122
Query: 311 TLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMG 370
+D+EEL+ L+ T + R S++RAMFA RACRKSVMIG AL++ +M +V +MG
Sbjct: 123 AFDVQDLEELIHTLRDTAPGQTARCSKVRAMFAMRACRKSVMIGDALNMRQMKEIVLHMG 182
Query: 371 RIDQPW 376
+DQPW
Sbjct: 183 TMDQPW 188
>gi|343428639|emb|CBQ72169.1| related to PMS1-DNA mismatch repair protein [Sporisorium reilianum
SRZ2]
Length = 947
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 111/277 (40%), Positives = 156/277 (56%), Gaps = 26/277 (9%)
Query: 116 ANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQA 175
A + + VE D D+ + DM RLQ ++ L+L +L A +Q
Sbjct: 638 AAMHEPAAVVESDAFDQDDIIAFDMDRLQQRMQKRRASALALKSAPAELPASGDEELLQG 697
Query: 176 QDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDS------ 229
VEN+ A + E L+RVI K F M +VGQFNLGFII + +
Sbjct: 698 A--GVENQDEAQV--------ERALSRVIHKQDFAAMDVVGQFNLGFIIARRRTQPDASS 747
Query: 230 ----DLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKN 285
DLFI+DQHA+DEK+NFETLQ TT I+SQKL+VP+ L L+ ++ + ++ N
Sbjct: 748 DEMDDLFIVDQHASDEKFNFETLQLTTQIRSQKLIVPRPLELSASDELVAIEHQATLLSN 807
Query: 286 GFEFSFDSSD--DGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHC----RPSRIR 339
GFE +F + V L + P+SK T G +D+EELL++L+ T++ R S+ R
Sbjct: 808 GFEVAFSETGLPGTRVKLVAQPISKATVFGAKDLEELLYLLRDTSAGSEAAKSIRCSKAR 867
Query: 340 AMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
AMFASRACRKS+MIG AL+ M +++NMG I+QPW
Sbjct: 868 AMFASRACRKSIMIGTALNKARMGAVLKNMGTIEQPW 904
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
+ NEVY FN++ +PF++ + + DS DVNV+PDKR IF+ E L+ VK + + +
Sbjct: 324 RAFNEVYKSFNSNHFPFVVADFRLPTDSYDVNVSPDKRTIFLHEESRLIEKVKQALEELF 383
Query: 62 A---IGFTVDG 69
A F V+G
Sbjct: 384 APSRATFLVNG 394
>gi|339522103|gb|AEJ84216.1| mismatch repair endonuclease PMS2 [Capra hircus]
Length = 191
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 92/171 (53%), Positives = 119/171 (69%), Gaps = 3/171 (1%)
Query: 208 MFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHL 267
M +M+I+GQFNLGFI K ++ +FI+DQHATDEKYNFE LQ+ T+++ Q+L+ PQ L L
Sbjct: 1 MSAEMEIIGQFNLGFISTKLNAAIFIVDQHATDEKYNFEMLQQHTVLQGQRLIAPQTLSL 60
Query: 268 TKINQCILKDNLPVFYKNGFEFSFD--SSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQ 325
T N+ IL +NL +F KNG +F+ D + L SLP SKN T G +DI+ELLFML
Sbjct: 61 TAGNEAILIENLEIFRKNGVDFAIDEHAPVTERAKLISLPTSKNWTFGPQDIDELLFMLS 120
Query: 326 HTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+ CRPSR+R MFASRACRKSVMIG L+ EM L+ + G +D PW
Sbjct: 121 DSPGV-MCRPSRVRQMFASRACRKSVMIGTPLNTSEMKKLITHTGEMDHPW 170
>gi|302683344|ref|XP_003031353.1| hypothetical protein SCHCODRAFT_16115 [Schizophyllum commune H4-8]
gi|300105045|gb|EFI96450.1| hypothetical protein SCHCODRAFT_16115 [Schizophyllum commune H4-8]
Length = 462
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 106/239 (44%), Positives = 147/239 (61%), Gaps = 22/239 (9%)
Query: 152 PVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEK 211
PV L++ D+ KA + ++ D +N P+ + A + L RVI K+ F K
Sbjct: 195 PVKLTVSNQMDKGKATLSCYSLPPADSISQN-------PATSTAANA-LARVIDKADFAK 246
Query: 212 MKIVGQFNLGFIIVKYDS----------DLFIIDQHATDEKYNFETLQKTTLIKSQKLVV 261
M +VGQFN GFII + DLFI+DQHA+DEKYNFETLQ+TT I+SQ+L+
Sbjct: 247 MDVVGQFNRGFIIARRRKQPESGGSSMDDLFIVDQHASDEKYNFETLQQTTKIESQRLLR 306
Query: 262 PQNLHLTKINQCILKDNLPVFYKNGFEF----SFDSSDDGNVLLTSLPMSKNTTLGREDI 317
P+ L LT ++ I +D+L V +NGFE + + SD + L + P+SK+TT D+
Sbjct: 307 PRPLELTAADEMIARDHLDVLRQNGFEVEDSGAGNDSDGARLRLVAQPVSKSTTFDMRDL 366
Query: 318 EELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
EEL+ +LQ R S+ RAMFASRACRKSVMIG L+ G+MT +V++MG +DQPW
Sbjct: 367 EELIHLLQDAPGGAAVRCSKARAMFASRACRKSVMIGMPLTKGQMTAVVQHMGTMDQPW 425
>gi|350645954|emb|CCD59361.1| DNA mismatch repair protein PMS2, putative [Schistosoma mansoni]
Length = 706
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 95/198 (47%), Positives = 126/198 (63%), Gaps = 3/198 (1%)
Query: 181 ENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATD 240
EN +N+EAE+EL KK F +K++GQFNLGFII +++ DLFIIDQHA+D
Sbjct: 490 ENIMFGKFTSIENQEAENELTTYFKKETFNSLKVIGQFNLGFIIAQHNQDLFIIDQHASD 549
Query: 241 EKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGN-- 298
EKY FE L + KSQ LVVPQ L+LT N+ +L +NL VF +NGF F S +
Sbjct: 550 EKYRFEQLSENYRFKSQPLVVPQKLNLTITNEQVLINNLDVFARNGFAFRIHSDEPAGQQ 609
Query: 299 VLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALS 358
+ L + PM +N DIEE+LF+L T + CRPSR+R + ASR+CR +VMIG AL
Sbjct: 610 ISLVAAPMLENKLFSYRDIEEMLFVLSET-CNKKCRPSRLRDILASRSCRSAVMIGTALD 668
Query: 359 VGEMTGLVRNMGRIDQPW 376
+M ++ NMG +D PW
Sbjct: 669 HKKMKRILTNMGSMDHPW 686
>gi|390597109|gb|EIN06509.1| hypothetical protein PUNSTDRAFT_72337 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 369
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 103/240 (42%), Positives = 142/240 (59%), Gaps = 27/240 (11%)
Query: 164 LKARYARRTVQAQDRCVENRFHANIDPSK-------NKEAESELNRVIKKSMFEKMKIVG 216
L++ YAR + N A++ S N++A L RVI KS FE M ++G
Sbjct: 94 LRSPYARDIDCQPTTAIANEASADLSTSGGLKNADDNEKAADALARVITKSDFETMDVLG 153
Query: 217 QFNLGFIIVK-----------------YDSDLFIIDQHATDEKYNFETLQKTTLIKSQKL 259
QFNLGFII + + DLFIIDQHA DEKYNFETLQ+TT I+SQ+L
Sbjct: 154 QFNLGFIITRRRQWQTNDHEADVENKPFSDDLFIIDQHAADEKYNFETLQQTTKIQSQRL 213
Query: 260 VVPQNLHLTKINQCILKDNLPVFYKNGFEFSFD---SSDDGNVLLTSLPMSKNTTLGRED 316
P+ L LT ++ ++ +N+ V +NGF+ + D S G + L + P+SKNT +D
Sbjct: 214 FRPRPLELTAADELVVTENIEVLRQNGFDVAVDENASFGQGRLQLVAQPVSKNTVFDMKD 273
Query: 317 IEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+EELL ++Q + R S+ +AMFASRACRKSVMIG L+ +M +VR+MG +DQPW
Sbjct: 274 LEELLHLMQDRPTGRMVRCSKAQAMFASRACRKSVMIGDPLTRKQMRSVVRHMGTMDQPW 333
>gi|320169208|gb|EFW46107.1| Pms2-PA [Capsaspora owczarzaki ATCC 30864]
Length = 975
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 90/183 (49%), Positives = 121/183 (66%), Gaps = 3/183 (1%)
Query: 183 RFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEK 242
+F I P + A +EL R I K+ F KMK++GQFN GFII K D DLF++DQHATDEK
Sbjct: 782 KFRTKISPQSEQAAVAELARSIFKTDFAKMKVLGQFNRGFIIAKLDKDLFLVDQHATDEK 841
Query: 243 YNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGN--VL 300
YN+E LQ++ ++SQ L+ P L LT N+ +L DN+ +F NGF+F D S V
Sbjct: 842 YNYEKLQESVRLQSQPLIRPMPLQLTAANEVVLMDNIDIFRMNGFDFVVDESAPATERVR 901
Query: 301 LTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVG 360
L+++P SK TT G D++ELL+ L + CRPSR+ +M ASRACRKSVMIG LS
Sbjct: 902 LSAMPFSKKTTFGPSDVDELLYRLSDSPGV-MCRPSRVASMLASRACRKSVMIGDPLSTS 960
Query: 361 EMT 363
+++
Sbjct: 961 QIS 963
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K+ NE+YH F +P + LN+ + ++DVNVTPDKR I + EK L+ K ++
Sbjct: 417 KVANEIYHSFIAGSFPALFLNLALPSAAIDVNVTPDKRTILLHDEKELVLAFKTCLS--- 473
Query: 62 AIGFT 66
AI F
Sbjct: 474 AISFA 478
>gi|164423658|ref|XP_962690.2| hypothetical protein NCU08020 [Neurospora crassa OR74A]
gi|157070185|gb|EAA33454.2| hypothetical protein NCU08020 [Neurospora crassa OR74A]
Length = 894
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 99/213 (46%), Positives = 133/213 (62%), Gaps = 31/213 (14%)
Query: 195 EAESELNRVIKKSMFEKMKIVGQFNLGFIIV-----------------------KYDSDL 231
+AE +L+ I KS F KMKIVGQFNLGFII + D +L
Sbjct: 606 DAEEKLSLKISKSDFAKMKIVGQFNLGFIIAVREASSSHSLEHSPSQQSPAATTQEDDEL 665
Query: 232 FIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSF 291
FIIDQHA+DEKYNFE LQ TT ++SQ+LV P+ L LT + + I+ ++LP NGF+
Sbjct: 666 FIIDQHASDEKYNFERLQSTTTVQSQRLVQPKPLTLTAVEEEIILEHLPALAANGFQVRV 725
Query: 292 DSSDDGNV----LLTSLPMSKNTTLGREDIEELLFML----QHTNSTEHCRPSRIRAMFA 343
D+S + V L SLP+S+ TT G D+EEL+F+L + +T RPS++R MFA
Sbjct: 726 DTSGESAVGSRCQLLSLPLSRETTFGVADLEELIFLLGDNPTSSATTAIPRPSKVRKMFA 785
Query: 344 SRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
RACR S+MIGRALS +M +VR+MG +++PW
Sbjct: 786 MRACRSSIMIGRALSRPQMEKVVRHMGEMEKPW 818
>gi|39979139|emb|CAE85513.1| related to DNA mismatch repair protein PMS1 [Neurospora crassa]
Length = 1157
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 99/213 (46%), Positives = 133/213 (62%), Gaps = 31/213 (14%)
Query: 195 EAESELNRVIKKSMFEKMKIVGQFNLGFIIV-----------------------KYDSDL 231
+AE +L+ I KS F KMKIVGQFNLGFII + D +L
Sbjct: 869 DAEEKLSLKISKSDFAKMKIVGQFNLGFIIAVREASSSHSLEHSPSQQSPAATTQEDDEL 928
Query: 232 FIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSF 291
FIIDQHA+DEKYNFE LQ TT ++SQ+LV P+ L LT + + I+ ++LP NGF+
Sbjct: 929 FIIDQHASDEKYNFERLQSTTTVQSQRLVQPKPLTLTAVEEEIILEHLPALAANGFQVRV 988
Query: 292 DSSDDGNV----LLTSLPMSKNTTLGREDIEELLFML----QHTNSTEHCRPSRIRAMFA 343
D+S + V L SLP+S+ TT G D+EEL+F+L + +T RPS++R MFA
Sbjct: 989 DTSGESAVGSRCQLLSLPLSRETTFGVADLEELIFLLGDNPTSSATTAIPRPSKVRKMFA 1048
Query: 344 SRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
RACR S+MIGRALS +M +VR+MG +++PW
Sbjct: 1049 MRACRSSIMIGRALSRPQMEKVVRHMGEMEKPW 1081
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLL 50
K+ NEVY +N+ Q PFI +I++ DVNV+PDKR I + + +L
Sbjct: 300 KVFNEVYRSYNSTQSPFIFADIQLDTHLYDVNVSPDKRTILLHDQGQML 348
>gi|336471360|gb|EGO59521.1| hypothetical protein NEUTE1DRAFT_128886 [Neurospora tetrasperma FGSC
2508]
gi|350292457|gb|EGZ73652.1| hypothetical protein NEUTE2DRAFT_149656 [Neurospora tetrasperma FGSC
2509]
Length = 1157
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 99/213 (46%), Positives = 133/213 (62%), Gaps = 31/213 (14%)
Query: 195 EAESELNRVIKKSMFEKMKIVGQFNLGFIIV-----------------------KYDSDL 231
+AE +L+ I KS F KMKIVGQFNLGFII + D +L
Sbjct: 869 DAEEKLSLKISKSDFAKMKIVGQFNLGFIIAVREASSSHSLEHSPTQQSPAATTQEDDEL 928
Query: 232 FIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSF 291
FIIDQHA+DEKYNFE LQ TT ++SQ+LV P+ L LT + + I+ ++LP NGF+
Sbjct: 929 FIIDQHASDEKYNFERLQSTTTVQSQRLVQPKPLTLTAVEEEIILEHLPALAANGFQVRV 988
Query: 292 DSSDDGNV----LLTSLPMSKNTTLGREDIEELLFML----QHTNSTEHCRPSRIRAMFA 343
D+S + V L SLP+S+ TT G D+EEL+F+L + +T RPS++R MFA
Sbjct: 989 DTSGESAVGSRCQLLSLPLSRETTFGVADLEELIFLLGDNPTSSATTAIPRPSKVRKMFA 1048
Query: 344 SRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
RACR S+MIGRALS +M +VR+MG +++PW
Sbjct: 1049 MRACRSSIMIGRALSRPQMEKVVRHMGEMEKPW 1081
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLL 50
K+ NEVY +N+ Q PFI +I++ DVNV+PDKR I + + +L
Sbjct: 300 KVFNEVYRSYNSTQSPFIFADIQLDTHLYDVNVSPDKRTILLHDQGQML 348
>gi|400596335|gb|EJP64109.1| DNA mismatch repair protein MutL [Beauveria bassiana ARSEF 2860]
Length = 1015
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 97/225 (43%), Positives = 138/225 (61%), Gaps = 33/225 (14%)
Query: 185 HANIDPSKN---KEAESELNRVIKKSMFEKMKIVGQFNLGFIIV---------------- 225
+AN+D ++ +AES L +I K F KM++ GQFN+GFII
Sbjct: 748 NANMDSVEDISAADAESRLQLIISKEDFGKMRVAGQFNMGFIIAVRPRASNSKSPSNGSD 807
Query: 226 KYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKN 285
+ +L IIDQHA+DEKYNFE LQ +T+++SQ+LV P+ L LT + + I+ +NLP N
Sbjct: 808 SSNDELLIIDQHASDEKYNFERLQSSTVVQSQRLVHPKTLELTALEEEIVMENLPAIEAN 867
Query: 286 GFEFSFDSSDDGNV----LLTSLPMSKNTTLGREDIEELLFMLQHTNS----------TE 331
GF+ D+S D V +LT+LP+S+ T ED+EEL+ +L S T+
Sbjct: 868 GFKILVDTSGDSPVGSRCMLTALPLSRETAFSLEDLEELIAILGDAPSGGGGGGIGGNTQ 927
Query: 332 HCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
RP+++R MFA RACR SVMIG+AL+ +M GLVR+MG +D+PW
Sbjct: 928 IPRPTKVRKMFAMRACRSSVMIGKALTTSQMYGLVRHMGELDKPW 972
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATV 53
K NEVY +N Q PFI +I + + DVNV+PDKR I + + LL ++
Sbjct: 295 KTFNEVYKSYNYSQSPFIFADIRLDTNMYDVNVSPDKRSILLHDQNHLLESL 346
>gi|406605428|emb|CCH43072.1| DNA mismatch repair protein [Wickerhamomyces ciferrii]
Length = 925
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 91/194 (46%), Positives = 134/194 (69%), Gaps = 11/194 (5%)
Query: 194 KEAESELNRVIKKSMFEKMKIVGQFNLGFIIV----KYDSDLFIIDQHATDEKYNFETLQ 249
+E+E++L + K F +MKI+GQFNLGFI+V DLFI+DQHA+DEK+NFETLQ
Sbjct: 721 EESENKLTLTVSKKDFLEMKIIGQFNLGFILVIRQNDLKQDLFIVDQHASDEKFNFETLQ 780
Query: 250 KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGN----VLLTSLP 305
K T+ SQ LVVP+ + L +++ + +N VF KNGF+F D +DG + L SLP
Sbjct: 781 KITIFDSQPLVVPKKIELNALDELTIIENQQVFVKNGFKFEID--EDGEPGSRIKLISLP 838
Query: 306 MSKNTTLGREDIEELLFML-QHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTG 364
+SK T D EL+ ++ ++ +T+ R S+IR+MFA RACRKS+M+G++L+ MT
Sbjct: 839 LSKKTVFDENDFNELIHLIKENQGNTDSIRCSKIRSMFAMRACRKSIMVGKSLNTKTMTK 898
Query: 365 LVRNMGRIDQPWVS 378
++RN+G++D+PWVS
Sbjct: 899 VIRNLGQLDKPWVS 912
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 56/89 (62%), Gaps = 2/89 (2%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K +NEVY FN+ QYP ILN E++ +D+NVTPDK+ I + +E ++L +K + + Y
Sbjct: 291 KAINEVYKSFNHLQYPVFILNFEINPQFLDLNVTPDKKIILIHNEDIILEKLKQELINFY 350
Query: 62 AI-GFTVDGNNMN-QSMEQDPSSDVDMEK 88
+ ++ N+ N QS++ SS +D E+
Sbjct: 351 NLQDLSLVRNSTNQQSLDLRSSSMIDDEE 379
>gi|324503073|gb|ADY41341.1| Mismatch repair endonuclease PMS2 [Ascaris suum]
Length = 900
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 96/216 (44%), Positives = 135/216 (62%), Gaps = 10/216 (4%)
Query: 167 RYARRTVQAQDRCVENRFHANIDPS----KNKEAESELNRVIKKSMFEKMKIVGQFNLGF 222
R R +R +EN A + P+ + AE +L ++K F M +VGQFN GF
Sbjct: 650 RSRRSAALLSERAMEN---AVVQPTFTIVSQQAAEDDLGANVRKEDFAVMDVVGQFNKGF 706
Query: 223 IIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVF 282
II + DLFI+DQHA+DEKYNFE LQK I+SQ L+ P+ L + + + L+DN+ +F
Sbjct: 707 IITRLRGDLFIVDQHASDEKYNFERLQKEARIQSQLLINPRPLKIGAMEEAALRDNIEIF 766
Query: 283 YKNGFEFSFD--SSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRA 340
+NGFEF FD +G LLTS+P+ + LG DI+E+L +L T + RP+++R
Sbjct: 767 NQNGFEFRFDDNGESEGRALLTSVPVLNSCQLGTSDIDEMLSVLADFPGTMY-RPTKLRK 825
Query: 341 MFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+FASRACRKSVMIG ALS +M +VR++G + PW
Sbjct: 826 LFASRACRKSVMIGMALSTPQMEKIVRHLGALHHPW 861
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 40/60 (66%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
++ NEVY Q+N QY ++L +++ +S+DVNV PDKR +F + E+ L A V+ + ++
Sbjct: 300 RIANEVYQQYNQGQYCMLVLLVDVPPESIDVNVAPDKRSVFYEKERELFAVVRASLLATF 359
>gi|380493498|emb|CCF33836.1| DNA mismatch repair protein MutL [Colletotrichum higginsianum]
Length = 1061
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 98/203 (48%), Positives = 132/203 (65%), Gaps = 20/203 (9%)
Query: 194 KEAESELNRVIKKSMFEKMKIVGQFNLGFII------------VKYDSDLFIIDQHATDE 241
++ E L+ +I KS F KM IVGQFNLGFII + D +LFIIDQHA+DE
Sbjct: 821 EDPEEVLSLIISKSDFAKMTIVGQFNLGFIIAVRHAPRDEDGGISGDDELFIIDQHASDE 880
Query: 242 KYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNV-- 299
KYNFE LQ TT+++SQ+LV P+ L LT + + I+ +N+P NGF+ DSS D V
Sbjct: 881 KYNFERLQSTTVVQSQRLVHPKQLDLTALEEEIIMENIPALDVNGFKVGVDSSGDQPVGS 940
Query: 300 --LLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHC----RPSRIRAMFASRACRKSVMI 353
L +LP+S+ TT D+EEL+ +L + TE RPS++R+MFA RACR SVMI
Sbjct: 941 RCKLLALPLSRETTFTLSDLEELVSLLGDHHLTETSSSVPRPSKVRSMFAMRACRSSVMI 1000
Query: 354 GRALSVGEMTGLVRNMGRIDQPW 376
G+AL+ +M LVR+MG +D+PW
Sbjct: 1001 GKALAQRQMEKLVRHMGELDKPW 1023
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVK 54
K+ NEVY +N Q PFI +I++ DVNV+PDKR I + + +L ++K
Sbjct: 296 KVFNEVYKAYNASQSPFIFADIQLDTHLYDVNVSPDKRTIMLHDQNRMLESLK 348
>gi|402223104|gb|EJU03169.1| DNA mismatch repair protein MutL [Dacryopinax sp. DJM-731 SS1]
Length = 1010
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 120/333 (36%), Positives = 190/333 (57%), Gaps = 45/333 (13%)
Query: 75 SMEQDPSSDV-----DMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDT 129
S+ Q+PS++V + + +E+VE E +P+ + D S +++ P T
Sbjct: 656 SVSQEPSTEVSTIDEETADVVDLTAEDVEMEDVPIVA-DKIAMSVATQNRENMSGAAPTT 714
Query: 130 PDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLK-ARYARRTVQAQDRCV----ENRF 184
+E++ D R ++ LS+D+ + + K A A R+ A R + ++
Sbjct: 715 ----VEILRD--------RVTSKGVLSVDMSRIRSKWAALAERSNLAHQRTISQSSDSME 762
Query: 185 HANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVK-----------YDSDLFI 233
A + ++AE+ L+RVI K+ F +M I+GQFNLGF+IV+ YD +LFI
Sbjct: 763 AAGLKVDSAEQAEATLSRVITKADFGRMVILGQFNLGFVIVRLRKESEDGKKEYD-ELFI 821
Query: 234 IDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGF---EFS 290
+DQHA DEK+NFE+LQ+TT I+SQ L P+ L LT ++ + +NL + +NGF E
Sbjct: 822 VDQHAADEKFNFESLQQTTRIQSQALFRPRPLELTPADELVALENLAILRENGFDVEEVE 881
Query: 291 FDSSDDGNVL-------LTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFA 343
++DD ++ LT+ P+SKNT +D+EELL ++Q + R S+ R MFA
Sbjct: 882 MAAADDESIAARQSRLRLTAQPISKNTVFDMKDLEELLHLMQDAPKGQMVRCSKARTMFA 941
Query: 344 SRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+RACR+SVMIG AL+ +MT +VR+MG ++QPW
Sbjct: 942 TRACRRSVMIGMALTRQQMTNVVRHMGTMEQPW 974
Score = 45.1 bits (105), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K + +V+H F +L+I + D+ DVNV+PDKR I + +E+ ++ ++K + + +
Sbjct: 301 KAIADVWHSFCVQGQGMWVLDITLPTDAYDVNVSPDKRSILLHNEENMITSLKAALEELW 360
Query: 62 A---IGFTVDGN 70
F V+G
Sbjct: 361 QPTRSTFAVNGG 372
>gi|388853212|emb|CCF53078.1| related to PMS1-DNA mismatch repair protein [Ustilago hordei]
Length = 990
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/290 (40%), Positives = 164/290 (56%), Gaps = 26/290 (8%)
Query: 102 IPVPSEDNSNFSHE-ANLQQSPETVEPDTPDETIEVIDDMPRLQGSYR-QSTPVTLSLDI 159
+P+ ED S+ A +QQS T++ D D ++ D+ LQ + + V LS
Sbjct: 669 VPMDEEDEEPLSNRLAAMQQSSLTIDDDVTD-GAHILFDLTGLQKRLQARKGAVALSASK 727
Query: 160 IQDQ-LKARYARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQF 218
Q L A +Q A + + E L+RVI K F M++VGQF
Sbjct: 728 SASQSLPASGDEELLQG----------AGVSNQDENQVEQALSRVIHKEDFSTMEVVGQF 777
Query: 219 NLGFIIVK----YDS--DLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQ 272
N+GFII + YD DLFI+DQHA+DEKYNFETLQ TT I+SQKL+ P+ L L+ ++
Sbjct: 778 NVGFIIARRRTDYDDMDDLFIVDQHASDEKYNFETLQLTTTIRSQKLISPRLLELSASDE 837
Query: 273 CILKDNLPVFYKNGFEFSFDSSD--DGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNST 330
+ ++ NGFE S + V L + P+SK+T G +D+EELLF+L+ T++
Sbjct: 838 LVAIEHQDTLLANGFEISVSETGLPGTRVKLVTQPISKSTVFGVKDLEELLFLLRDTSAG 897
Query: 331 EHC----RPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
R S+ R MFASRACRKS+MIG AL+ +M+ ++RNMG I+QPW
Sbjct: 898 SEAARRIRCSKARNMFASRACRKSIMIGTALNKAKMSAILRNMGTIEQPW 947
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
+ NEVY FN++ +PF+I + + DS DVNV+PDKR IF+ E L+ VK + + +
Sbjct: 334 RAFNEVYKSFNSNHFPFVIADFRLPTDSYDVNVSPDKRTIFLHEESRLIEKVKEALDELF 393
Query: 62 A---IGFTVDG 69
A F V+G
Sbjct: 394 APSRATFLVNG 404
>gi|440799068|gb|ELR20129.1| DNA mismatch repair protein, C-terminal domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 1076
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 97/198 (48%), Positives = 126/198 (63%), Gaps = 22/198 (11%)
Query: 196 AESELNRVIKKSMFEKMK-----------IVGQFNLGFIIVKYDSDLFIIDQHATDEKYN 244
AE EL RV KKS F+ ++ I+GQFNLGFII K D D+FIIDQHA+DEKYN
Sbjct: 824 AEEELRRVFKKSFFDDLQVILTVLVLRGQIIGQFNLGFIIAKLDQDVFIIDQHASDEKYN 883
Query: 245 FETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFD--SSDDGNVLLT 302
+ETLQ+TT+I +Q L+ P ++ LT + + I+ DN +F KNGF F D + V L
Sbjct: 884 YETLQQTTVINTQPLLSPLSMELTAVEESIVMDNREMFRKNGFHFVIDEQAPPRQQVKLA 943
Query: 303 SLPMSKNTTLGREDIEELLFMLQHTNSTEH----CRPSRIRAMFASRACRKSVMIGRALS 358
S+P SKN G ED+ EL+ L+ EH CR SR+ AMFASRACR ++MIG ALS
Sbjct: 944 SVPFSKNKQFGVEDVHELICQLE-----EHPGMMCRLSRVSAMFASRACRSAIMIGTALS 998
Query: 359 VGEMTGLVRNMGRIDQPW 376
EM ++ NM ++ PW
Sbjct: 999 KKEMKRVLHNMTLLENPW 1016
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%)
Query: 1 MKLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
+K++N+VY Q N Q LN + DS DVNVTPDKR I + E ++ +K +
Sbjct: 263 VKVINDVYRQANPGQSAIFFLNFALETDSYDVNVTPDKRTIMLHDESDIVQALKAALEKF 322
Query: 61 YAI 63
Y I
Sbjct: 323 YGI 325
>gi|167525904|ref|XP_001747286.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774121|gb|EDQ87753.1| predicted protein [Monosiga brevicollis MX1]
Length = 871
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/195 (49%), Positives = 131/195 (67%), Gaps = 3/195 (1%)
Query: 184 FHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKY 243
FHA ID + N AE+EL R I K F +M+I+GQFNLGFII + DLFIIDQHATDEKY
Sbjct: 646 FHARIDRNANNAAEAELARQISKEDFLRMRIIGQFNLGFIIARLGRDLFIIDQHATDEKY 705
Query: 244 NFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFD--SSDDGNVLL 301
NFE L K+T I+ Q+L+ + L L + + L D+ +F +NGFEF D + V L
Sbjct: 706 NFERLSKSTKIQQQRLIQGKALRLPAVQEMTLIDHEEIFKQNGFEFVVDEGAPPTKKVKL 765
Query: 302 TSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGE 361
T++P SK+ G+EDIEE+L +L +PSR+RAM ASRACR S+M+G+AL V E
Sbjct: 766 TAIPHSKHVEFGQEDIEEMLALLLERPGV-FVQPSRLRAMLASRACRSSIMVGKALKVAE 824
Query: 362 MTGLVRNMGRIDQPW 376
M +V++M +++ PW
Sbjct: 825 MAEVVQHMSQLEHPW 839
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 19/75 (25%)
Query: 2 KLVNEVYHQFNNHQYPFIILNI-------------------EMSRDSVDVNVTPDKRQIF 42
+ VN+ +H N QYPF++L+I +M SVDVNVTPDKR I
Sbjct: 280 RAVNDAFHTLNKAQYPFLVLDITLHAAAKVFGIFDELFSPPQMPTQSVDVNVTPDKRTIL 339
Query: 43 MDHEKLLLATVKVHI 57
+ E L ++ H+
Sbjct: 340 VQRENQLSDAIRAHM 354
>gi|172203|gb|AAA34885.1| DNA mismatch repair protein [Saccharomyces cerevisiae]
Length = 904
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 99/223 (44%), Positives = 146/223 (65%), Gaps = 14/223 (6%)
Query: 163 QLKARYARRTVQAQDRCVENRFHANIDPSKN-KEAESELNRVIKKSMFEKMKIVGQFNLG 221
Q+ + ++R +AQ+ ++N+ D ++ ++ E L + K+ F+KM++VGQFNLG
Sbjct: 660 QMSSIISKRKSEAQENIIKNK-----DELEDFEQGEKYLTLTVSKNDFKKMEVVGQFNLG 714
Query: 222 FIIV--KYD--SDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKD 277
FIIV K D SDLFI+DQHA+DEKYNFETLQ T+ KSQKL++PQ + L+ I++ ++ D
Sbjct: 715 FIIVTRKVDNKSDLFIVDQHASDEKYNFETLQAVTVFKSQKLIIPQPVELSVIDELVVLD 774
Query: 278 NLPVFYKNGFEFSFDSSDD--GNVLLTSLPMSKNTTLGREDIEELLFMLQHTNST--EHC 333
NLPVF KNGF+ D ++ V L SLP SK T D EL+ +++ ++
Sbjct: 775 NLPVFEKNGFKLKIDEEEEFGSRVKLLSLPTSKQTLFDLGDFNELIHLIKEDGGLRRDNI 834
Query: 334 RPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
R S+IR+MFA RACR S+MIG+ L+ MT +V N+ +D+PW
Sbjct: 835 RCSKIRSMFAMRACRSSIMIGKPLNKKTMTRVVHNLSELDKPW 877
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 8/154 (5%)
Query: 1 MKLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
+K NEVY FNN Q+P + LN+E+ +DVNVTPDKR I + +E+ ++ K ++D
Sbjct: 327 LKCCNEVYKTFNNVQFPAVFLNLELPMSLIDVNVTPDKRVILLHNERAVIDIFKTTLSDY 386
Query: 61 YAIGFTVDGNNMNQSMEQDPSSDVDMEKI-QRSNSEEVEHETIPVPSEDNSNFSHEANLQ 119
Y M EQ + E RS + E ++E + SN S+ A+
Sbjct: 387 YNRQELALPKRMCSQSEQQAQKRLKTEVFDDRSTTHESDNENYHTARSE-SNQSNHAHFN 445
Query: 120 QSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPV 153
+ ++ E V+D G+Y T V
Sbjct: 446 STTGVIDKSNGTELTSVMD------GNYTNVTDV 473
>gi|346325063|gb|EGX94660.1| DNA mismatch repair protein PMS1 [Cordyceps militaris CM01]
Length = 992
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 92/203 (45%), Positives = 128/203 (63%), Gaps = 21/203 (10%)
Query: 195 EAESELNRVIKKSMFEKMKIVGQFNLGFIIV--------------KYDSDLFIIDQHATD 240
+AES L +I K F KM++ GQFNLGFII + +LFIIDQHA+D
Sbjct: 747 DAESRLQLIISKGDFGKMRVAGQFNLGFIIAVRPRTSQSPTTGDGASNDELFIIDQHASD 806
Query: 241 EKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDD---- 296
EKYNFE LQ +T+++SQ+LV P+ L LT + + I+ +N NGF+ D+S D
Sbjct: 807 EKYNFERLQSSTVVQSQRLVHPKTLDLTALEEEIVMENQAAIEANGFQILVDTSGDAPVG 866
Query: 297 GNVLLTSLPMSKNTTLGREDIEELLFMLQHT---NSTEHCRPSRIRAMFASRACRKSVMI 353
G LT+LP+S+ T ED+EEL+ +L T + RP+++R MFA RACR SVMI
Sbjct: 867 GRCTLTALPLSRETAFSLEDLEELIAILGDTPGGGDAQIPRPAKVRKMFAMRACRSSVMI 926
Query: 354 GRALSVGEMTGLVRNMGRIDQPW 376
G+ L++ +M GLVR+MG +D+PW
Sbjct: 927 GKPLTLRQMYGLVRHMGELDKPW 949
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K NE+Y +N Q PFI +I + + DVNV+PDKR I + + LL +++ + + +
Sbjct: 295 KTFNEIYKSYNYSQSPFIFADIRLDTNMYDVNVSPDKRSILLHDQNHLLESLRSALVELF 354
>gi|17562796|ref|NP_505933.1| Protein PMS-2, isoform a [Caenorhabditis elegans]
gi|3878022|emb|CAA18355.1| Protein PMS-2, isoform a [Caenorhabditis elegans]
Length = 805
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 92/200 (46%), Positives = 132/200 (66%), Gaps = 6/200 (3%)
Query: 180 VENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHAT 239
V N I+ +N +AE +L+R + K F KMKI+GQFN GFII + LFI+DQHA+
Sbjct: 587 VLNEITTKINKEENDDAERQLSRSLTKDDFSKMKIIGQFNHGFIICRLRGHLFIVDQHAS 646
Query: 240 DEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNV 299
DEKYNFE LQ + + Q L +P L + + I+++NLP+F+ NGF+F F S +DG +
Sbjct: 647 DEKYNFERLQSSAKLTKQPLFMPTALGFGAVQELIIRENLPIFHANGFDFEF-SENDGCI 705
Query: 300 --LLTSLPMSKNTTLGREDIEELLFML-QHTNSTEHCRPSRIRAMFASRACRKSVMIGRA 356
LT+ P N L D+EE+L ++ Q+ N + RP RIR +FAS+ACRKSVMIG+
Sbjct: 706 KTFLTARPELLNQQLTNSDLEEILAVVSQYPN--QMYRPVRIRKIFASKACRKSVMIGKP 763
Query: 357 LSVGEMTGLVRNMGRIDQPW 376
L+ EMT ++R++ ++DQPW
Sbjct: 764 LNQREMTQIIRHLAKLDQPW 783
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 42/59 (71%)
Query: 3 LVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
++N+VY QFN QYP I+L I++ + +DVNVTPDK+ + ++ E+ LLA V+ + +Y
Sbjct: 304 VINDVYKQFNKKQYPIIVLFIDVPPEKIDVNVTPDKKTVMLEKERHLLAVVRASMMKTY 362
>gi|347840713|emb|CCD55285.1| hypothetical protein [Botryotinia fuckeliana]
Length = 325
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 91/198 (45%), Positives = 128/198 (64%), Gaps = 17/198 (8%)
Query: 196 AESELNRVIKKSMFEKMKIVGQFNLGFII-------------VKYDSDLFIIDQHATDEK 242
AE L+ I KS F KMKI+GQFNLGFI+ ++ ++FIIDQH++DEK
Sbjct: 80 AEERLSLTISKSDFAKMKIIGQFNLGFILASKAPELTTENSGIQTADNVFIIDQHSSDEK 139
Query: 243 YNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSD---DGNV 299
YNFE LQ TT+++SQ+LV P+ L LT + + I+ +NL + +NGF + D S G
Sbjct: 140 YNFERLQATTIVQSQRLVYPKTLSLTALEEEIVAENLDILEQNGFVLTIDQSSQDVGGRC 199
Query: 300 LLTSLPMSKNTTLGREDIEELLFMLQHTNS-TEHCRPSRIRAMFASRACRKSVMIGRALS 358
L SLP+S+ TT D+EEL+ +L + RPS++R MFA RACR S+MIG++L+
Sbjct: 200 QLVSLPVSRETTFSINDLEELIALLAESGGRAGMVRPSKVRKMFAMRACRSSIMIGKSLT 259
Query: 359 VGEMTGLVRNMGRIDQPW 376
G+M +VR+MG I+QPW
Sbjct: 260 RGQMEKVVRHMGEIEQPW 277
>gi|367045350|ref|XP_003653055.1| hypothetical protein THITE_2115054 [Thielavia terrestris NRRL 8126]
gi|347000317|gb|AEO66719.1| hypothetical protein THITE_2115054 [Thielavia terrestris NRRL 8126]
Length = 1097
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 95/203 (46%), Positives = 129/203 (63%), Gaps = 21/203 (10%)
Query: 195 EAESELNRVIKKSMFEKMKIVGQFNLGFIIV--------------KYDSDLFIIDQHATD 240
+AE +L+ I KS F KMK+VGQFNLGFI+ D +LFIIDQHA+D
Sbjct: 843 DAEEKLSLKISKSDFAKMKVVGQFNLGFILAVREAEPSTEDGRAEADDDELFIIDQHASD 902
Query: 241 EKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSD----D 296
EKYNFE LQ TT ++SQ+LV P+ L LT + + I+ ++LP +NGF D+S
Sbjct: 903 EKYNFERLQATTTVQSQRLVQPKTLELTALEEEIILEHLPALERNGFVAQVDTSGARPVG 962
Query: 297 GNVLLTSLPMSKNTTLGREDIEELLFMLQH---TNSTEHCRPSRIRAMFASRACRKSVMI 353
L SLP+S+ TT D EELLF+L +++T RPS++R +FA RACR S+MI
Sbjct: 963 ARAQLLSLPLSRETTFSVADFEELLFLLADNPTSSATTVPRPSKVRKLFAMRACRSSIMI 1022
Query: 354 GRALSVGEMTGLVRNMGRIDQPW 376
GRALS +M +VR+MG +++PW
Sbjct: 1023 GRALSRRQMERVVRHMGEMEKPW 1045
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLL 50
K+ NEVY +N Q PFI +I++ DVNV+PDKR I + + +L
Sbjct: 303 KVFNEVYRSYNAAQSPFIFADIQLDTRLYDVNVSPDKRTILLHDQGQML 351
>gi|19880904|gb|AAM00551.1|AF458974_6 PMS1 [Saccharomyces cerevisiae]
Length = 908
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 98/223 (43%), Positives = 146/223 (65%), Gaps = 14/223 (6%)
Query: 163 QLKARYARRTVQAQDRCVENRFHANIDPSKN-KEAESELNRVIKKSMFEKMKIVGQFNLG 221
Q+ + ++R +AQ+ ++N+ D ++ ++ E L + K+ F+KM++VGQFNLG
Sbjct: 664 QMSSIISKRKSEAQENIIKNK-----DELEDFEQGEKYLTLTVSKNDFKKMEVVGQFNLG 718
Query: 222 FIIV--KYDS--DLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKD 277
FIIV K D+ DLFI+DQHA+DEKYNFETLQ T+ KSQKL++PQ + L+ I++ ++ D
Sbjct: 719 FIIVTRKVDNKYDLFIVDQHASDEKYNFETLQAVTVFKSQKLIIPQPVELSVIDELVVLD 778
Query: 278 NLPVFYKNGFEFSFDSSDD--GNVLLTSLPMSKNTTLGREDIEELLFMLQHTNST--EHC 333
NLPVF KNGF+ D ++ V L SLP SK T D EL+ +++ ++
Sbjct: 779 NLPVFEKNGFKLKIDEEEEFGSRVKLLSLPTSKQTLFDLGDFNELIHLIKEDGGLRRDNI 838
Query: 334 RPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
R S+IR+MFA RACR S+MIG+ L+ MT +V N+ +D+PW
Sbjct: 839 RCSKIRSMFAMRACRSSIMIGKPLNKKTMTRVVHNLSELDKPW 881
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 40/61 (65%)
Query: 1 MKLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
+K NEVY FNN Q+P + LN+E+ +DVNVTPDKR I + +E+ ++ K ++D
Sbjct: 327 LKCCNEVYKTFNNVQFPAVFLNLELPMSLIDVNVTPDKRVILLHNERAVIDIFKTTLSDY 386
Query: 61 Y 61
Y
Sbjct: 387 Y 387
>gi|398364981|ref|NP_014317.4| Pms1p [Saccharomyces cerevisiae S288c]
gi|110282983|sp|P14242.3|PMS1_YEAST RecName: Full=DNA mismatch repair protein PMS1; AltName:
Full=Postmeiotic segregation protein 1
gi|86161598|gb|ABC86932.1| PMS1 [Saccharomyces cerevisiae]
gi|86161602|gb|ABC86934.1| PMS1 [Saccharomyces cerevisiae]
gi|86161604|gb|ABC86935.1| PMS1 [Saccharomyces cerevisiae]
gi|86161606|gb|ABC86936.1| PMS1 [Saccharomyces cerevisiae]
gi|151944452|gb|EDN62730.1| postmeiotic segregation protein [Saccharomyces cerevisiae YJM789]
gi|190409071|gb|EDV12336.1| DNA mismatch repair protein PMS1 [Saccharomyces cerevisiae RM11-1a]
gi|285814569|tpg|DAA10463.1| TPA: Pms1p [Saccharomyces cerevisiae S288c]
gi|392296909|gb|EIW08010.1| Pms1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 873
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 98/223 (43%), Positives = 146/223 (65%), Gaps = 14/223 (6%)
Query: 163 QLKARYARRTVQAQDRCVENRFHANIDPSKN-KEAESELNRVIKKSMFEKMKIVGQFNLG 221
Q+ + ++R +AQ+ ++N+ D ++ ++ E L + K+ F+KM++VGQFNLG
Sbjct: 629 QMSSIISKRKSEAQENIIKNK-----DELEDFEQGEKYLTLTVSKNDFKKMEVVGQFNLG 683
Query: 222 FIIV--KYDS--DLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKD 277
FIIV K D+ DLFI+DQHA+DEKYNFETLQ T+ KSQKL++PQ + L+ I++ ++ D
Sbjct: 684 FIIVTRKVDNKYDLFIVDQHASDEKYNFETLQAVTVFKSQKLIIPQPVELSVIDELVVLD 743
Query: 278 NLPVFYKNGFEFSFDSSDD--GNVLLTSLPMSKNTTLGREDIEELLFMLQHTNST--EHC 333
NLPVF KNGF+ D ++ V L SLP SK T D EL+ +++ ++
Sbjct: 744 NLPVFEKNGFKLKIDEEEEFGSRVKLLSLPTSKQTLFDLGDFNELIHLIKEDGGLRRDNI 803
Query: 334 RPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
R S+IR+MFA RACR S+MIG+ L+ MT +V N+ +D+PW
Sbjct: 804 RCSKIRSMFAMRACRSSIMIGKPLNKKTMTRVVHNLSELDKPW 846
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 8/154 (5%)
Query: 1 MKLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
+K NEVY FNN Q+P + LN+E+ +DVNVTPDKR I + +E+ ++ K ++D
Sbjct: 296 LKCCNEVYKTFNNVQFPAVFLNLELPMSLIDVNVTPDKRVILLHNERAVIDIFKTTLSDY 355
Query: 61 YAIGFTVDGNNMNQSMEQDPSSDVDMEKI-QRSNSEEVEHETIPVPSEDNSNFSHEANLQ 119
Y M EQ + E RS + E ++E + SN S+ A+
Sbjct: 356 YNRQELALPKRMCSQSEQQAQKRLKTEVFDDRSTTHESDNENYHTARSE-SNQSNHAHFN 414
Query: 120 QSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPV 153
+ ++ E V+D G+Y T V
Sbjct: 415 STTGVIDKSNGTELTSVMD------GNYTNVTDV 442
>gi|207341693|gb|EDZ69678.1| YNL082Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 420
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 98/223 (43%), Positives = 146/223 (65%), Gaps = 14/223 (6%)
Query: 163 QLKARYARRTVQAQDRCVENRFHANIDPSKN-KEAESELNRVIKKSMFEKMKIVGQFNLG 221
Q+ + ++R +AQ+ ++N+ D ++ ++ E L + K+ F+KM++VGQFNLG
Sbjct: 176 QMSSIISKRKSEAQENIIKNK-----DELEDFEQGEKYLTLTVSKNDFKKMEVVGQFNLG 230
Query: 222 FIIV--KYDS--DLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKD 277
FIIV K D+ DLFI+DQHA+DEKYNFETLQ T+ KSQKL++PQ + L+ I++ ++ D
Sbjct: 231 FIIVTRKVDNKYDLFIVDQHASDEKYNFETLQAVTVFKSQKLIIPQPVELSVIDELVVLD 290
Query: 278 NLPVFYKNGFEFSFDSSDD--GNVLLTSLPMSKNTTLGREDIEELLFMLQHTNS--TEHC 333
NLPVF KNGF+ D ++ V L SLP SK T D EL+ +++ ++
Sbjct: 291 NLPVFEKNGFKLKIDEEEEFGSRVKLLSLPTSKQTLFDLGDFNELIHLIKEDGGLRRDNI 350
Query: 334 RPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
R S+IR+MFA RACR S+MIG+ L+ MT +V N+ +D+PW
Sbjct: 351 RCSKIRSMFAMRACRSSIMIGKPLNKKTMTRVVHNLSELDKPW 393
>gi|86161600|gb|ABC86933.1| PMS1 [Saccharomyces cerevisiae]
gi|259149279|emb|CAY82521.1| Pms1p [Saccharomyces cerevisiae EC1118]
Length = 873
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 98/223 (43%), Positives = 146/223 (65%), Gaps = 14/223 (6%)
Query: 163 QLKARYARRTVQAQDRCVENRFHANIDPSKN-KEAESELNRVIKKSMFEKMKIVGQFNLG 221
Q+ + ++R +AQ+ ++N+ D ++ ++ E L + K+ F+KM++VGQFNLG
Sbjct: 629 QMSSIISKRKSEAQENIIKNK-----DELEDFEQGEKYLTLTVSKNDFKKMEVVGQFNLG 683
Query: 222 FIIV--KYDS--DLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKD 277
FIIV K D+ DLFI+DQHA+DEKYNFETLQ T+ KSQKL++PQ + L+ I++ ++ D
Sbjct: 684 FIIVTRKVDNKYDLFIVDQHASDEKYNFETLQAVTVFKSQKLIIPQPVELSVIDELVVLD 743
Query: 278 NLPVFYKNGFEFSFDSSDD--GNVLLTSLPMSKNTTLGREDIEELLFMLQHTNST--EHC 333
NLPVF KNGF+ D ++ V L SLP SK T D EL+ +++ ++
Sbjct: 744 NLPVFEKNGFKLKIDEEEEFGSRVKLLSLPTSKQTLFDLGDFNELIHLIKEDGGLRRDNI 803
Query: 334 RPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
R S+IR+MFA RACR S+MIG+ L+ MT +V N+ +D+PW
Sbjct: 804 RCSKIRSMFAMRACRSSIMIGKPLNKKTMTRVVHNLSELDKPW 846
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 8/154 (5%)
Query: 1 MKLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
+K NEVY FNN Q+P + LN+E+ +DVNVTPDKR I + +E+ ++ K ++D
Sbjct: 296 LKCCNEVYKTFNNVQFPAVFLNLELPMSLIDVNVTPDKRVILLHNERAVIDIFKTTLSDY 355
Query: 61 YAIGFTVDGNNMNQSMEQDPSSDVDMEKI-QRSNSEEVEHETIPVPSEDNSNFSHEANLQ 119
Y M EQ + E RS + E ++E + SN S+ A+
Sbjct: 356 YNRQELALPKRMCSQSEQQAQKRLKTEVFDDRSTTHESDNENYHTARSE-SNQSNHAHFN 414
Query: 120 QSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPV 153
+ ++ E V+D G+Y T V
Sbjct: 415 STTGVIDKSNGTELTSVMD------GNYTNVTDV 442
>gi|19880869|gb|AAM00521.1|AF458969_6 PMS1 [Saccharomyces cerevisiae]
gi|19880925|gb|AAM00569.1|AF458977_6 PMS1 [Saccharomyces cerevisiae]
gi|791102|emb|CAA60176.1| DNA mismatch repair protein [Saccharomyces cerevisiae]
gi|1301977|emb|CAA95957.1| PMS1 [Saccharomyces cerevisiae]
gi|2253174|emb|CAA95956.1| PMS1 [Saccharomyces cerevisiae]
Length = 904
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 98/223 (43%), Positives = 146/223 (65%), Gaps = 14/223 (6%)
Query: 163 QLKARYARRTVQAQDRCVENRFHANIDPSKN-KEAESELNRVIKKSMFEKMKIVGQFNLG 221
Q+ + ++R +AQ+ ++N+ D ++ ++ E L + K+ F+KM++VGQFNLG
Sbjct: 660 QMSSIISKRKSEAQENIIKNK-----DELEDFEQGEKYLTLTVSKNDFKKMEVVGQFNLG 714
Query: 222 FIIV--KYDS--DLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKD 277
FIIV K D+ DLFI+DQHA+DEKYNFETLQ T+ KSQKL++PQ + L+ I++ ++ D
Sbjct: 715 FIIVTRKVDNKYDLFIVDQHASDEKYNFETLQAVTVFKSQKLIIPQPVELSVIDELVVLD 774
Query: 278 NLPVFYKNGFEFSFDSSDD--GNVLLTSLPMSKNTTLGREDIEELLFMLQHTNST--EHC 333
NLPVF KNGF+ D ++ V L SLP SK T D EL+ +++ ++
Sbjct: 775 NLPVFEKNGFKLKIDEEEEFGSRVKLLSLPTSKQTLFDLGDFNELIHLIKEDGGLRRDNI 834
Query: 334 RPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
R S+IR+MFA RACR S+MIG+ L+ MT +V N+ +D+PW
Sbjct: 835 RCSKIRSMFAMRACRSSIMIGKPLNKKTMTRVVHNLSELDKPW 877
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 8/154 (5%)
Query: 1 MKLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
+K NEVY FNN Q+P + LN+E+ +DVNVTPDKR I + +E+ ++ K ++D
Sbjct: 327 LKCCNEVYKTFNNVQFPAVFLNLELPMSLIDVNVTPDKRVILLHNERAVIDIFKTTLSDY 386
Query: 61 YAIGFTVDGNNMNQSMEQDPSSDVDMEKI-QRSNSEEVEHETIPVPSEDNSNFSHEANLQ 119
Y M EQ + E RS + E ++E + SN S+ A+
Sbjct: 387 YNRQELALPKRMCSQSEQQAQKRLKTEVFDDRSTTHESDNENYHTARSE-SNQSNHAHFN 445
Query: 120 QSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPV 153
+ ++ E V+D G+Y T V
Sbjct: 446 STTGVIDKSNGTELTSVMD------GNYTNVTDV 473
>gi|19880897|gb|AAM00545.1|AF458973_6 PMS1 [Saccharomyces cerevisiae]
Length = 908
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 98/223 (43%), Positives = 146/223 (65%), Gaps = 14/223 (6%)
Query: 163 QLKARYARRTVQAQDRCVENRFHANIDPSKN-KEAESELNRVIKKSMFEKMKIVGQFNLG 221
Q+ + ++R +AQ+ ++N+ D ++ ++ E L + K+ F+KM++VGQFNLG
Sbjct: 664 QMSSIISKRKSEAQENIIKNK-----DELEDFEQGEKYLTLTVSKNDFKKMEVVGQFNLG 718
Query: 222 FIIV--KYDS--DLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKD 277
FIIV K D+ DLFI+DQHA+DEKYNFETLQ T+ KSQKL++PQ + L+ I++ ++ D
Sbjct: 719 FIIVTRKVDNKYDLFIVDQHASDEKYNFETLQAVTVFKSQKLIIPQPVELSVIDELVVLD 778
Query: 278 NLPVFYKNGFEFSFDSSDD--GNVLLTSLPMSKNTTLGREDIEELLFMLQHTNST--EHC 333
NLPVF KNGF+ D ++ V L SLP SK T D EL+ +++ ++
Sbjct: 779 NLPVFEKNGFKLKIDEEEEFGSRVKLLSLPTSKQTLFDLGDFNELIHLIKEDGGLRRDNI 838
Query: 334 RPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
R S+IR+MFA RACR S+MIG+ L+ MT +V N+ +D+PW
Sbjct: 839 RCSKIRSMFAMRACRSSIMIGKPLNKKTMTRVVHNLSELDKPW 881
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 40/61 (65%)
Query: 1 MKLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
+K NEVY FNN Q+P + LN+E+ +DVNVTPDKR I + +E+ ++ K ++D
Sbjct: 327 LKCCNEVYKTFNNVQFPAVFLNLELPMSLIDVNVTPDKRVILLHNERAVIDIFKTTLSDY 386
Query: 61 Y 61
Y
Sbjct: 387 Y 387
>gi|323346896|gb|EGA81175.1| Pms1p [Saccharomyces cerevisiae Lalvin QA23]
gi|365763326|gb|EHN04855.1| Pms1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 873
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 98/223 (43%), Positives = 146/223 (65%), Gaps = 14/223 (6%)
Query: 163 QLKARYARRTVQAQDRCVENRFHANIDPSKN-KEAESELNRVIKKSMFEKMKIVGQFNLG 221
Q+ + ++R +AQ+ ++N+ D ++ ++ E L + K+ F+KM++VGQFNLG
Sbjct: 629 QMSSIISKRKSEAQENIIKNK-----DELEDFEQGEKYLTLTVSKNDFKKMEVVGQFNLG 683
Query: 222 FIIV--KYDS--DLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKD 277
FIIV K D+ DLFI+DQHA+DEKYNFETLQ T+ KSQKL++PQ + L+ I++ ++ D
Sbjct: 684 FIIVTRKVDNKYDLFIVDQHASDEKYNFETLQAVTVFKSQKLIIPQPVELSVIDELVVLD 743
Query: 278 NLPVFYKNGFEFSFDSSDD--GNVLLTSLPMSKNTTLGREDIEELLFMLQHTNST--EHC 333
NLPVF KNGF+ D ++ V L SLP SK T D EL+ +++ ++
Sbjct: 744 NLPVFEKNGFKLKIDEEEEFGSRVKLLSLPTSKQTLFDLGDFNELIHLIKEDGGLRRDNI 803
Query: 334 RPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
R S+IR+MFA RACR S+MIG+ L+ MT +V N+ +D+PW
Sbjct: 804 RCSKIRSMFAMRACRSSIMIGKPLNKKTMTRVVHNLSELDKPW 846
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 8/154 (5%)
Query: 1 MKLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
+K NEVY FNN Q+P + LN+E+ +DVNVTPDKR I + +E+ ++ K ++D
Sbjct: 296 LKCCNEVYKTFNNVQFPAVFLNLELPMSLIDVNVTPDKRVILLHNERAVIDIFKTTLSDY 355
Query: 61 YAIGFTVDGNNMNQSMEQDPSSDVDMEKI-QRSNSEEVEHETIPVPSEDNSNFSHEANLQ 119
Y M EQ + E RS + E ++E + SN S+ A+
Sbjct: 356 YNRQELALPKRMCSQSEQQAQKRLKTEVFDDRSTTHESDNENYHTARSE-SNQSNHAHFN 414
Query: 120 QSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPV 153
+ ++ E V+D G+Y T V
Sbjct: 415 STTGVIDKSNGTELTSVMD------GNYTNVTDV 442
>gi|256270259|gb|EEU05477.1| Pms1p [Saccharomyces cerevisiae JAY291]
Length = 877
Score = 180 bits (457), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 98/223 (43%), Positives = 146/223 (65%), Gaps = 14/223 (6%)
Query: 163 QLKARYARRTVQAQDRCVENRFHANIDPSKN-KEAESELNRVIKKSMFEKMKIVGQFNLG 221
Q+ + ++R +AQ+ ++N+ D ++ ++ E L + K+ F+KM++VGQFNLG
Sbjct: 633 QMSSIISKRKSEAQENIIKNK-----DELEDFEQGEKYLTLTVSKNDFKKMEVVGQFNLG 687
Query: 222 FIIV--KYDS--DLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKD 277
FIIV K D+ DLFI+DQHA+DEKYNFETLQ T+ KSQKL++PQ + L+ I++ ++ D
Sbjct: 688 FIIVTRKVDNKYDLFIVDQHASDEKYNFETLQAVTVFKSQKLIIPQPVELSVIDELVVLD 747
Query: 278 NLPVFYKNGFEFSFDSSDD--GNVLLTSLPMSKNTTLGREDIEELLFMLQHTNST--EHC 333
NLPVF KNGF+ D ++ V L SLP SK T D EL+ +++ ++
Sbjct: 748 NLPVFEKNGFKLKIDEEEEFGSRVKLLSLPTSKQTLFDLGDFNELIHLIKEDGGLRRDNI 807
Query: 334 RPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
R S+IR+MFA RACR S+MIG+ L+ MT +V N+ +D+PW
Sbjct: 808 RCSKIRSMFAMRACRSSIMIGKPLNKETMTRVVHNLSELDKPW 850
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 62/124 (50%), Gaps = 2/124 (1%)
Query: 1 MKLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
+K NEVY FNN Q+P + LN+E+ +DVNVTPDKR I + +E+ ++ K ++D
Sbjct: 296 LKCCNEVYKTFNNVQFPAVFLNLELPMSLIDVNVTPDKRVILLHNERAVIDIFKTTLSDY 355
Query: 61 YAIGFTVDGNNMNQSMEQDPSSDVDMEKI-QRSNSEEVEHETIPVPSEDNSNFSHEANLQ 119
Y M EQ + E + RS + E ++E + SN S+ AN
Sbjct: 356 YNRQELALPKRMCSQSEQQAQKRLKTEVVDDRSTTHESDNENYH-SARSESNQSNHANFN 414
Query: 120 QSPE 123
+ E
Sbjct: 415 STCE 418
>gi|443899579|dbj|GAC76910.1| DNA mismatch repair protein - MLH2/PMS1/Pms2 family [Pseudozyma
antarctica T-34]
Length = 915
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 93/207 (44%), Positives = 129/207 (62%), Gaps = 16/207 (7%)
Query: 186 ANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDS----------DLFIID 235
A ++ + ++ E L+RVI K F M ++GQFNLGFII + + DLFI+D
Sbjct: 668 AGVENADEEQVERTLSRVIHKQDFASMDVIGQFNLGFIIARRRTEPSGSADEMDDLFIVD 727
Query: 236 QHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSD 295
QHA+DEKYNFETLQ TT I+SQKL+ P+ L L+ ++ + ++ NGFE + S
Sbjct: 728 QHASDEKYNFETLQLTTQIRSQKLICPRALELSASDELVAIEHQSTLLANGFEIAVSESG 787
Query: 296 --DGNVLLTSLPMSKNTTLGREDIEELLFMLQ----HTNSTEHCRPSRIRAMFASRACRK 349
V L + P+SK T G +D+EELL++L+ T +T R S+ R+MFASRACRK
Sbjct: 788 LPGTRVKLVAQPISKTTVFGVKDLEELLYLLRDMSAGTEATRAVRCSKARSMFASRACRK 847
Query: 350 SVMIGRALSVGEMTGLVRNMGRIDQPW 376
SVMIG AL+ M ++ NMG I+QPW
Sbjct: 848 SVMIGTALNKARMGSILANMGTIEQPW 874
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
+ NEVY FN++ +PFII + + DS DVNV+PDKR IF+ E L+ VK + + +
Sbjct: 323 RAFNEVYKSFNSNHFPFIIADFRLPTDSYDVNVSPDKRTIFLHEESRLIEKVKQALEELF 382
Query: 62 A---IGFTVDG 69
A F V+G
Sbjct: 383 APSRATFLVNG 393
>gi|393906452|gb|EJD74284.1| CBR-PMS-2 protein [Loa loa]
Length = 832
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 94/203 (46%), Positives = 135/203 (66%), Gaps = 7/203 (3%)
Query: 177 DRCVENRFHANIDPSKNKE-AESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIID 235
+R +E+R +D N E AESEL I K FE M+I+GQFN GFIIV+ ++DLFI+D
Sbjct: 613 ERIMESRTEFRVD---NPEVAESELAAYISKKDFESMEILGQFNKGFIIVRLNNDLFIVD 669
Query: 236 QHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSD 295
QHA+DEKYNFE QK I++Q L+ P+ L L + + IL+DN+ +F NGFEF FD +
Sbjct: 670 QHASDEKYNFERFQKKARIQTQHLISPRVLDLGVVKEAILRDNVDIFNYNGFEFQFDDEE 729
Query: 296 --DGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMI 353
LLT++P+ ++ DI+E+L +L + RP+++R +FASRACRKSVMI
Sbjct: 730 VVGKRALLTAIPVLQSWQFSISDIDEMLSVLCDFPGMMY-RPAKLRKLFASRACRKSVMI 788
Query: 354 GRALSVGEMTGLVRNMGRIDQPW 376
G +L++ M +VR++G +D PW
Sbjct: 789 GSSLTMAHMEKIVRHLGTLDHPW 811
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 42/61 (68%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
++ NEVY Q+N QY +IL +++ +S+DVNV+PDKR +F + EK L A ++ + ++
Sbjct: 302 RIANEVYQQYNRGQYCLLILFVDVPPESIDVNVSPDKRSVFFEREKELFALLRASLLATF 361
Query: 62 A 62
A
Sbjct: 362 A 362
>gi|336369197|gb|EGN97539.1| hypothetical protein SERLA73DRAFT_56795 [Serpula lacrymans var.
lacrymans S7.3]
gi|336381986|gb|EGO23137.1| hypothetical protein SERLADRAFT_471892 [Serpula lacrymans var.
lacrymans S7.9]
Length = 313
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 91/196 (46%), Positives = 129/196 (65%), Gaps = 12/196 (6%)
Query: 193 NKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDS---------DLFIIDQHATDEKY 243
+++A + L+R I K F+ MK++GQFNLGFII + DLFIIDQHA DEKY
Sbjct: 83 DEKATAALSRTIGKEDFDTMKVLGQFNLGFIIARRQKSMEAEGDLDDLFIIDQHAADEKY 142
Query: 244 NFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDG---NVL 300
NFETLQ+TT+I+SQKL P+ L L+ ++ + +NL + +NGF+ D + G +
Sbjct: 143 NFETLQQTTVIESQKLFRPRVLELSAADELVAVENLEILQRNGFDVQADDATSGPGSRLQ 202
Query: 301 LTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVG 360
L + P+SKNT +D+EEL+ +LQ + R S+ RAMFA RACRKS+M+G L+
Sbjct: 203 LLAQPVSKNTQFDIKDLEELIHLLQDRPAGTMVRCSKARAMFAMRACRKSIMVGMPLTHN 262
Query: 361 EMTGLVRNMGRIDQPW 376
+MT +VR+MG +DQPW
Sbjct: 263 QMTSVVRHMGTMDQPW 278
>gi|349580855|dbj|GAA26014.1| K7_Pms1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 877
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 98/223 (43%), Positives = 146/223 (65%), Gaps = 14/223 (6%)
Query: 163 QLKARYARRTVQAQDRCVENRFHANIDPSKN-KEAESELNRVIKKSMFEKMKIVGQFNLG 221
Q+ + ++R +AQ+ ++N+ D ++ ++ E L + K+ F+KM++VGQFNLG
Sbjct: 633 QMSSIISKRKSEAQENIIKNK-----DELEDFEQGEKYLTLTVSKNDFKKMEVVGQFNLG 687
Query: 222 FIIV--KYDS--DLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKD 277
FIIV K D+ DLFI+DQHA+DEKYNFETLQ T+ KSQKL++PQ + L+ I++ ++ D
Sbjct: 688 FIIVTRKVDNKYDLFIVDQHASDEKYNFETLQAVTVFKSQKLIIPQPVELSVIDELVVLD 747
Query: 278 NLPVFYKNGFEFSFDSSDD--GNVLLTSLPMSKNTTLGREDIEELLFMLQHTNST--EHC 333
NLPVF KNGF+ D ++ V L SLP SK T D EL+ +++ ++
Sbjct: 748 NLPVFEKNGFKLKIDEEEEFGSRVRLLSLPTSKQTLFDLGDFNELIHLIKEDGGLRRDNI 807
Query: 334 RPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
R S+IR+MFA RACR S+MIG+ L+ MT +V N+ +D+PW
Sbjct: 808 RCSKIRSMFAMRACRSSLMIGKPLNKKTMTRVVHNLSELDKPW 850
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 40/61 (65%)
Query: 1 MKLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
+K NEVY FNN Q+P + LN+E+ +DVNVTPDKR I + +E+ ++ K ++D
Sbjct: 296 LKCCNEVYKTFNNVQFPAVFLNLELPMSLIDVNVTPDKRVILLHNERAVIDIFKTTLSDY 355
Query: 61 Y 61
Y
Sbjct: 356 Y 356
>gi|310792029|gb|EFQ27556.1| DNA mismatch repair protein MutL [Glomerella graminicola M1.001]
Length = 1060
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 97/202 (48%), Positives = 130/202 (64%), Gaps = 20/202 (9%)
Query: 195 EAESELNRVIKKSMFEKMKIVGQFNLGFIIV------------KYDSDLFIIDQHATDEK 242
+AE L+ +I KS F KM IVGQFNLGFII D +LFIIDQHA+DEK
Sbjct: 821 DAEEVLSLIISKSDFAKMTIVGQFNLGFIIAVRNATRDGEGDPSGDDELFIIDQHASDEK 880
Query: 243 YNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNV--- 299
YNFE LQ TT+++SQ+LV P+ L LT + + I+ +N+ NGF+ S DSS V
Sbjct: 881 YNFERLQSTTVVQSQRLVHPKQLELTALEEEIVMENISALDVNGFKVSVDSSGSQPVGSR 940
Query: 300 -LLTSLPMSKNTTLGREDIEELLFMLQHTNSTE----HCRPSRIRAMFASRACRKSVMIG 354
L +LP+S+ TT D+EEL+ +L + TE RPS++R+MFA RACR SVMIG
Sbjct: 941 CKLLALPLSRETTFTLSDLEELISLLGDHHLTEARSSAPRPSKVRSMFAMRACRSSVMIG 1000
Query: 355 RALSVGEMTGLVRNMGRIDQPW 376
+AL+ +M L+R+MG +D+PW
Sbjct: 1001 KALAQKQMEKLIRHMGELDKPW 1022
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVK 54
K+ NEVY +N Q PFI +I++ DVNV+PDKR I + + +L ++K
Sbjct: 296 KVFNEVYKAYNASQSPFIFADIQLDTHLYDVNVSPDKRTIMLHDQSRMLESLK 348
>gi|171690870|ref|XP_001910360.1| hypothetical protein [Podospora anserina S mat+]
gi|170945383|emb|CAP71495.1| unnamed protein product [Podospora anserina S mat+]
Length = 1002
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 95/196 (48%), Positives = 130/196 (66%), Gaps = 16/196 (8%)
Query: 197 ESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDS---------DLFIIDQHATDEKYNFET 247
E +L+ I K+ F KMKI+GQFNLGFI+ + +LFIIDQHA+DEKYNFE
Sbjct: 761 EEKLSLKITKTDFAKMKIIGQFNLGFILAVREGSSSPSDDDDELFIIDQHASDEKYNFER 820
Query: 248 LQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNV----LLTS 303
LQ TT ++SQ+LV P+ L LT + + I+ +NL +NGF S D+S D V L +
Sbjct: 821 LQSTTTVQSQRLVQPKPLTLTALEEEIILENLVSLERNGFVVSVDTSGDSPVGSRCQLVT 880
Query: 304 LPMSKNTTLGREDIEELLFMLQ---HTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVG 360
LP+S+ TT D+EEL+F+L +++T RPS++R MFA RACR S+MIGRALS
Sbjct: 881 LPLSRETTFDLTDLEELIFLLGDNPSSSATTIPRPSKVRKMFAMRACRSSIMIGRALSGR 940
Query: 361 EMTGLVRNMGRIDQPW 376
+M +VRNMG +++PW
Sbjct: 941 QMERVVRNMGGMEKPW 956
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 1 MKLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLL 50
+K+ NEVY +N Q PFI +I++ DVNV+PDKR I + + +L
Sbjct: 298 VKVFNEVYRSYNASQLPFIFADIQLDTHLYDVNVSPDKRTILLHDQGQML 347
>gi|19880883|gb|AAM00533.1|AF458971_6 PMS1 [Saccharomyces cerevisiae]
Length = 908
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 97/223 (43%), Positives = 146/223 (65%), Gaps = 14/223 (6%)
Query: 163 QLKARYARRTVQAQDRCVENRFHANIDPSKN-KEAESELNRVIKKSMFEKMKIVGQFNLG 221
Q+ + ++R +AQ+ ++N+ D ++ ++ E L + K+ F+KM++VGQFNLG
Sbjct: 664 QMSSIISKRKSEAQENIIKNK-----DELEDFEQGEKYLTLTVSKNDFKKMEVVGQFNLG 718
Query: 222 FIIV--KYDS--DLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKD 277
FIIV K D+ DLFI+DQHA+DEKYNFETLQ T+ KSQKL++PQ + L+ I++ ++ D
Sbjct: 719 FIIVTRKVDNKYDLFIVDQHASDEKYNFETLQAVTVFKSQKLIIPQPVELSVIDELVVLD 778
Query: 278 NLPVFYKNGFEFSFDSSDD--GNVLLTSLPMSKNTTLGREDIEELLFMLQHTNST--EHC 333
NLPVF KNGF+ D ++ V L SLP SK T D EL+ +++ ++
Sbjct: 779 NLPVFEKNGFKLKIDEEEEFGSRVRLLSLPTSKQTLFDLGDFNELIHLIKEDGGLRRDNI 838
Query: 334 RPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
R S+IR+MFA RAC+ S+MIG+ L+ MT +V N+ +D+PW
Sbjct: 839 RCSKIRSMFAMRACKSSIMIGKPLNKKTMTRVVHNLSELDKPW 881
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 40/61 (65%)
Query: 1 MKLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
+K NEVY FNN Q+P + LN+E+ +DVNVTPDKR I + +E+ ++ K ++D
Sbjct: 327 LKCCNEVYKTFNNVQFPAVFLNLELPMSLIDVNVTPDKRVILLHNERAVIDIFKTTLSDY 386
Query: 61 Y 61
Y
Sbjct: 387 Y 387
>gi|71064118|gb|AAZ22526.1| Pms1p [Saccharomyces cerevisiae]
Length = 877
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 97/223 (43%), Positives = 146/223 (65%), Gaps = 14/223 (6%)
Query: 163 QLKARYARRTVQAQDRCVENRFHANIDPSKN-KEAESELNRVIKKSMFEKMKIVGQFNLG 221
Q+ + ++R +AQ+ ++N+ D ++ ++ E L + K+ F+KM++VGQFNLG
Sbjct: 633 QMSSIISKRKSEAQENIIKNK-----DELEDFEQGEKYLTLTVSKNDFKKMEVVGQFNLG 687
Query: 222 FIIV--KYDS--DLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKD 277
FIIV K D+ DLFI+DQHA+DEKYNFETLQ T+ KSQKL++PQ + L+ I++ ++ D
Sbjct: 688 FIIVTRKVDNKYDLFIVDQHASDEKYNFETLQAVTVFKSQKLIIPQPVELSVIDELVVLD 747
Query: 278 NLPVFYKNGFEFSFDSSDD--GNVLLTSLPMSKNTTLGREDIEELLFMLQHTNST--EHC 333
NLPVF KNGF+ D ++ V L SLP SK T D EL+ +++ ++
Sbjct: 748 NLPVFEKNGFKLKIDEEEEFGSRVKLLSLPTSKQTLFDLGDFNELIHLIKEDGGLRRDNI 807
Query: 334 RPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
R S+IR+MFA RAC+ S+MIG+ L+ MT +V N+ +D+PW
Sbjct: 808 RCSKIRSMFAMRACKSSIMIGKPLNKKTMTRVVHNLSELDKPW 850
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 40/61 (65%)
Query: 1 MKLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
+K NEVY FNN Q+P + LN+E+ +DVNVTPDKR I + +E+ ++ K ++D
Sbjct: 296 LKCCNEVYKTFNNVQFPAVFLNLELPMSLIDVNVTPDKRVILLHNERAVIDIFKTTLSDY 355
Query: 61 Y 61
Y
Sbjct: 356 Y 356
>gi|19880918|gb|AAM00563.1|AF458976_6 PMS1 [Saccharomyces cerevisiae]
Length = 908
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 97/223 (43%), Positives = 146/223 (65%), Gaps = 14/223 (6%)
Query: 163 QLKARYARRTVQAQDRCVENRFHANIDPSKN-KEAESELNRVIKKSMFEKMKIVGQFNLG 221
Q+ + ++R +AQ+ ++N+ D ++ ++ E L + K+ F+KM++VGQFNLG
Sbjct: 664 QMSSIISKRKSEAQENIIKNK-----DELEDFEQGEKYLTLTVSKNDFKKMEVVGQFNLG 718
Query: 222 FIIV--KYDS--DLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKD 277
FIIV K D+ DLFI+DQHA+DEKYNFETLQ T+ KSQKL++PQ + L+ I++ ++ D
Sbjct: 719 FIIVTRKVDNKYDLFIVDQHASDEKYNFETLQAVTVFKSQKLIIPQPVELSVIDELVVLD 778
Query: 278 NLPVFYKNGFEFSFDSSDD--GNVLLTSLPMSKNTTLGREDIEELLFMLQHTNST--EHC 333
NLPVF KNGF+ D ++ V L SLP SK T D EL+ +++ ++
Sbjct: 779 NLPVFEKNGFKLKIDEEEEFGSRVKLLSLPTSKQTLFDLGDFNELIHLIKEDGGLRRDNI 838
Query: 334 RPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
R S+IR+MFA RAC+ S+MIG+ L+ MT +V N+ +D+PW
Sbjct: 839 RCSKIRSMFAMRACKSSIMIGKPLNKKTMTRVVHNLSELDKPW 881
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 40/61 (65%)
Query: 1 MKLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
+K NEVY FNN Q+P + LN+E+ +DVNVTPDKR I + +E+ ++ K ++D
Sbjct: 327 LKCCNEVYKTFNNVQFPAVFLNLELPMSLIDVNVTPDKRVILLHNERAVIDIFKTTLSDY 386
Query: 61 Y 61
Y
Sbjct: 387 Y 387
>gi|345563548|gb|EGX46548.1| hypothetical protein AOL_s00109g120 [Arthrobotrys oligospora ATCC
24927]
Length = 1066
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 93/193 (48%), Positives = 128/193 (66%), Gaps = 13/193 (6%)
Query: 195 EAESELNRVIKKSMFEKMKIVGQFNLGFIIV-----KYDS--DLFIIDQHATDEKYNFET 247
+AE L+ I KS F KM+I GQFNLGFI+ K D DLFIIDQHA+DEKYNFE
Sbjct: 809 KAEERLSLTIAKSDFAKMRIAGQFNLGFILATRLSEKGDGVNDLFIIDQHASDEKYNFER 868
Query: 248 LQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNV----LLTS 303
LQ T++++Q LV P+ L L+ +++ ++ DN+ V KNGF D D+G V L S
Sbjct: 869 LQAETVVQNQPLVRPKVLELSAMDELVVMDNMDVLKKNGFVVEID--DEGPVGKRCRLVS 926
Query: 304 LPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMT 363
LPMSK+ +D EELL +++ + + RPS++RAMFA RACR S+MIGR L + +M
Sbjct: 927 LPMSKDKVFDLKDFEELLHLIREHPNDDTVRPSKVRAMFAMRACRSSIMIGRTLGLKDMK 986
Query: 364 GLVRNMGRIDQPW 376
+V++MG +D+PW
Sbjct: 987 KVVKHMGELDKPW 999
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 37/60 (61%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
+ +NEVY +N Q PF+ ++++ + DVNV+PDKR I + + LL ++K +T +
Sbjct: 293 RAINEVYKSYNLTQSPFVFADLQLDTTAYDVNVSPDKRTILLHDQASLLESLKTSLTKLF 352
>gi|395328077|gb|EJF60472.1| hypothetical protein DICSQDRAFT_63095 [Dichomitus squalens LYAD-421
SS1]
Length = 342
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 93/207 (44%), Positives = 132/207 (63%), Gaps = 16/207 (7%)
Query: 186 ANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDS--------------DL 231
A + + +++A L+RVI K F M+ VGQFNLGFIIV+ DL
Sbjct: 93 AGLANADDEQAVEALSRVIDKPDFASMEAVGQFNLGFIIVRRRKQGGEGDGVDDVEMDDL 152
Query: 232 FIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSF 291
F++DQHA DEKYNFETLQ+TT IKSQ+L+ P+ L LT ++ + +N+ + +NGFE
Sbjct: 153 FVVDQHAADEKYNFETLQQTTKIKSQQLISPEVLELTAADEVVALENIDILRQNGFELDI 212
Query: 292 --DSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRK 349
D VL+T+ P+S +T +D+EELL ++Q + + R S+ RAMFA RACRK
Sbjct: 213 AEDRPAGQRVLMTAHPVSGSTKFDAKDLEELLNLMQDRPAGQMVRCSKARAMFAMRACRK 272
Query: 350 SVMIGRALSVGEMTGLVRNMGRIDQPW 376
S+MIG AL+ +MT +V++MG +DQPW
Sbjct: 273 SIMIGTALNKRQMTSVVQHMGTMDQPW 299
>gi|451928628|pdb|4E4W|B Chain B, Structure Of The C-terminal Domain Of The Saccharomyces
Cerevisiae Mutl Alpha (mlh1/pms1) Heterodimer
Length = 239
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 97/217 (44%), Positives = 143/217 (65%), Gaps = 14/217 (6%)
Query: 169 ARRTVQAQDRCVENRFHANIDPSKN-KEAESELNRVIKKSMFEKMKIVGQFNLGFIIV-- 225
++R +AQ+ ++N+ D ++ ++ E L + K+ F+KM++VGQFNLGFIIV
Sbjct: 1 SKRKSEAQENIIKNK-----DELEDFEQGEKYLTLTVSKNDFKKMEVVGQFNLGFIIVTR 55
Query: 226 KYDS--DLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFY 283
K D+ DLFI+DQHA+DEKYNFETLQ T+ KSQKL++PQ + L+ I++ ++ DNLPVF
Sbjct: 56 KVDNKYDLFIVDQHASDEKYNFETLQAVTVFKSQKLIIPQPVELSVIDELVVLDNLPVFE 115
Query: 284 KNGFEFSFDSSDD--GNVLLTSLPMSKNTTLGREDIEELLFMLQHTNST--EHCRPSRIR 339
KNGF+ D ++ V L SLP SK T D EL+ +++ ++ R S+IR
Sbjct: 116 KNGFKLKIDEEEEFGSRVKLLSLPTSKQTLFDLGDFNELIHLIKEDGGLRRDNIRCSKIR 175
Query: 340 AMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+MFA RACR S+MIG+ L+ MT +V N+ +D+PW
Sbjct: 176 SMFAMRACRSSIMIGKPLNKKTMTRVVHNLSELDKPW 212
>gi|254572842|ref|XP_002493530.1| ATP-binding protein required for mismatch repair in mitosis and
meiosis [Komagataella pastoris GS115]
gi|238033329|emb|CAY71351.1| ATP-binding protein required for mismatch repair in mitosis and
meiosis [Komagataella pastoris GS115]
gi|328354646|emb|CCA41043.1| Mismatch repair endonuclease PMS2 [Komagataella pastoris CBS 7435]
Length = 903
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 91/194 (46%), Positives = 123/194 (63%), Gaps = 13/194 (6%)
Query: 196 AESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDS-----DLFIIDQHATDEKYNFETLQK 250
AE L + K+ F KMK+VGQFNLGFIIV S DLFI+DQHA+DEKYNFE QK
Sbjct: 683 AEEALTMRVSKTDFLKMKVVGQFNLGFIIVTKKSTEGKQDLFIVDQHASDEKYNFENFQK 742
Query: 251 TTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGN--VLLTSLPMSK 308
T SQ LVVPQ + L +++ +++DN+ +F KNGF F ++ + L S+PMSK
Sbjct: 743 NTQFLSQPLVVPQFIELNLLDEVLVQDNIEIFSKNGFSIKFQEENEAGKRIQLLSIPMSK 802
Query: 309 NTTLGREDIEELLFMLQHT------NSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEM 362
T D EL+ +L+ N H RPS+IR+MFA RACR S+MIG++LS+ M
Sbjct: 803 GTVFDIADFHELVHLLKENQGISKENLLAHVRPSKIRSMFAMRACRASIMIGKSLSMKTM 862
Query: 363 TGLVRNMGRIDQPW 376
T +V ++ +D+PW
Sbjct: 863 TRVVHHLSGLDKPW 876
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 54/97 (55%), Gaps = 5/97 (5%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDH-----EKLLLATVKVH 56
K +NE Y FN+ QYP ++LN+++ + +D+NVTPDKR I + H E L+ A +
Sbjct: 281 KKINEAYKTFNHLQYPMVVLNLKLDPNYLDINVTPDKRTIMIHHEDQVLESLIDALINEF 340
Query: 57 ITDSYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSN 93
+ S+ I ++ SM Q P+ D + +RS+
Sbjct: 341 NSQSHIIPKQETSTLVDSSMLQRPTGDTSFRQRKRSD 377
>gi|198419514|ref|XP_002120346.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
Length = 803
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 92/198 (46%), Positives = 129/198 (65%), Gaps = 9/198 (4%)
Query: 184 FHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKY 243
F AN+ + AE+EL + + KS F++M VGQFNLGF+I ++ +DLFIIDQHA+DE Y
Sbjct: 590 FRANL--ADTTTAEAELTKNLDKSSFQQMAPVGQFNLGFVIGRHGNDLFIIDQHASDEIY 647
Query: 244 NFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVL--- 300
N+ETLQ T +++Q LVVP L LT + +L +NL +F KNGF F SSD+G +L
Sbjct: 648 NYETLQATQTLQTQNLVVPLKLQLTPAGKIVLIENLEIFRKNGFGFKI-SSDEGKMLFDR 706
Query: 301 --LTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALS 358
++ +P LG DI+E++FML CRP+R+R +FA+RACR S MIG +L+
Sbjct: 707 RQVSYIPTHNPHPLGPPDIDEMIFMLSDAPGV-MCRPTRVRRIFATRACRMSTMIGTSLT 765
Query: 359 VGEMTGLVRNMGRIDQPW 376
+M L+R+M I PW
Sbjct: 766 KRQMLRLIRHMSEIVHPW 783
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 45/62 (72%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K+VNEVYH+FN HQ+PFI +NI D VDVNVTPDKR++F +E LL A + +T Y
Sbjct: 292 KIVNEVYHRFNRHQFPFIAINITTRHDLVDVNVTPDKRKVFFQNENLLFAIMTSSMTQLY 351
Query: 62 AI 63
++
Sbjct: 352 SL 353
>gi|451928668|pdb|4FMN|B Chain B, Structure Of The C-terminal Domain Of The Saccharomyces
Cerevisiae Mutl Alpha (mlh1/pms1) Heterodimer Bound To A
Fragment Of Ntg2
gi|451928671|pdb|4FMO|B Chain B, Structure Of The C-terminal Domain Of The Saccharomyces
Cerevisiae Mutl Alpha (mlh1/pms1) Heterodimer Bound To A
Fragment Of Exo1
Length = 240
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 97/217 (44%), Positives = 143/217 (65%), Gaps = 14/217 (6%)
Query: 169 ARRTVQAQDRCVENRFHANIDPSKN-KEAESELNRVIKKSMFEKMKIVGQFNLGFIIV-- 225
++R +AQ+ ++N+ D ++ ++ E L + K+ F+KM++VGQFNLGFIIV
Sbjct: 2 SKRKSEAQENIIKNK-----DELEDFEQGEKYLTLTVSKNDFKKMEVVGQFNLGFIIVTR 56
Query: 226 KYDS--DLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFY 283
K D+ DLFI+DQHA+DEKYNFETLQ T+ KSQKL++PQ + L+ I++ ++ DNLPVF
Sbjct: 57 KVDNKYDLFIVDQHASDEKYNFETLQAVTVFKSQKLIIPQPVELSVIDELVVLDNLPVFE 116
Query: 284 KNGFEFSFDSSDD--GNVLLTSLPMSKNTTLGREDIEELLFMLQHTNST--EHCRPSRIR 339
KNGF+ D ++ V L SLP SK T D EL+ +++ ++ R S+IR
Sbjct: 117 KNGFKLKIDEEEEFGSRVKLLSLPTSKQTLFDLGDFNELIHLIKEDGGLRRDNIRCSKIR 176
Query: 340 AMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+MFA RACR S+MIG+ L+ MT +V N+ +D+PW
Sbjct: 177 SMFAMRACRSSIMIGKPLNKKTMTRVVHNLSELDKPW 213
>gi|320580322|gb|EFW94545.1| MutL family mismatch-repair protein Pms1 [Ogataea parapolymorpha
DL-1]
Length = 830
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 127/194 (65%), Gaps = 6/194 (3%)
Query: 189 DPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIV----KYDSDLFIIDQHATDEKYN 244
D + +AE +L + K F +M+++GQFNLGFI+V K + LFIIDQHA+DEKYN
Sbjct: 610 DITDESDAERKLTLSVSKKDFLEMQVIGQFNLGFILVTKQDKSGTHLFIIDQHASDEKYN 669
Query: 245 FETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDS-SDDGNVL-LT 302
FE Q T+ +Q LV+PQ LHL I++ + +NL VF KNGF D + G L LT
Sbjct: 670 FERYQTETVFNNQPLVIPQQLHLNIIDELAIMNNLEVFGKNGFGLRVDEDAQPGERLSLT 729
Query: 303 SLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEM 362
SLP SK+TT G D++EL+ +++ + RPS++RAM A RACR S+MIG+ LS M
Sbjct: 730 SLPYSKDTTFGLSDLDELVHLVKEHHGRGVLRPSKVRAMLAMRACRTSIMIGKPLSHKTM 789
Query: 363 TGLVRNMGRIDQPW 376
T +VRN+ +D+PW
Sbjct: 790 TSVVRNLAALDKPW 803
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 41/61 (67%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K + +VY FN+ Q P I+L++E+ +DVNVTPDKR IF+ +E ++ +K +T+ +
Sbjct: 287 KAITDVYKTFNHLQCPVILLDLELDPQFIDVNVTPDKRTIFLHNEAAIIEALKERVTEIF 346
Query: 62 A 62
+
Sbjct: 347 S 347
>gi|367022212|ref|XP_003660391.1| hypothetical protein MYCTH_2298657 [Myceliophthora thermophila ATCC
42464]
gi|347007658|gb|AEO55146.1| hypothetical protein MYCTH_2298657 [Myceliophthora thermophila ATCC
42464]
Length = 1109
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 95/210 (45%), Positives = 135/210 (64%), Gaps = 20/210 (9%)
Query: 187 NIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIV-------------KYDSDLFI 233
+ D + ++AE +L+ I KS F +M+IVGQFNLGFI+ D +LFI
Sbjct: 854 SADGLEAEDAEEKLSLKICKSDFGRMRIVGQFNLGFILAVREAASLEEDRSEGADDELFI 913
Query: 234 IDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDS 293
IDQHA+DEKYNFE LQ TT ++SQ+LV P+ L LT + + I+ ++LP +NGF D+
Sbjct: 914 IDQHASDEKYNFERLQATTTVQSQRLVQPKTLDLTALEEEIVLEHLPDLERNGFLAQVDT 973
Query: 294 SD----DGNVLLTSLPMSKNTTLGREDIEELLFMLQH---TNSTEHCRPSRIRAMFASRA 346
S V L SLP+S+ TT D+EELLF+L ++++ RPS++R MFA RA
Sbjct: 974 SGAKPVGSRVQLLSLPLSRETTFSLADLEELLFLLADNPTSSASTVPRPSKVRKMFAMRA 1033
Query: 347 CRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
CR S+MIG+ALS +M +VR+MG +++PW
Sbjct: 1034 CRSSIMIGKALSRRQMETVVRHMGEMEKPW 1063
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLL 50
K+ NEVY +N Q PFI +I++ DVNV+PDKR I + + +L
Sbjct: 300 KVFNEVYRLYNASQSPFIFADIQLDTHLYDVNVSPDKRTILLHDQGQML 348
>gi|367012055|ref|XP_003680528.1| hypothetical protein TDEL_0C04280 [Torulaspora delbrueckii]
gi|359748187|emb|CCE91317.1| hypothetical protein TDEL_0C04280 [Torulaspora delbrueckii]
Length = 885
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 93/227 (40%), Positives = 140/227 (61%), Gaps = 12/227 (5%)
Query: 160 IQDQLKARYARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFN 219
+ + +R + Q+ +EN N D +E E + +KK F KM+IVGQFN
Sbjct: 634 LSKEFTSRLTNLASKRQNANLENSIEKNKDLQDLEEGEKYMTLTVKKDDFRKMQIVGQFN 693
Query: 220 LGFIIV------KYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQC 273
LGFIIV KYD LFI+DQHA+DEKYNFETLQ++T+ KSQ L+ P + L+ I++
Sbjct: 694 LGFIIVTRRVQDKYD--LFIVDQHASDEKYNFETLQRSTVFKSQSLIAPLPVELSIIDEL 751
Query: 274 ILKDNLPVFYKNGFEFSF--DSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNS-- 329
++ D+L VF KNGF+ D + L SLP+SK T +D EL+++++
Sbjct: 752 LVMDHLEVFEKNGFKLKIEEDEEQGSKIKLISLPVSKKTLFTVDDFYELVYLIKENGGLH 811
Query: 330 TEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
T++ R S++R+MFA RACR S+MIG+ L++ M +VR++ +++PW
Sbjct: 812 TDNIRCSKVRSMFAMRACRSSIMIGKPLAMKTMVKVVRHLSELEKPW 858
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 39/61 (63%)
Query: 1 MKLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
++ NEVY FNN QYP + LN +S +DVNVTPDKR + + +E+ ++ + ++ +
Sbjct: 296 LRCCNEVYRTFNNVQYPTVFLNFMLSPALIDVNVTPDKRTVMLHNERYIIEVFRENLINY 355
Query: 61 Y 61
Y
Sbjct: 356 Y 356
>gi|444324156|ref|XP_004182718.1| hypothetical protein TBLA_0J02050 [Tetrapisispora blattae CBS 6284]
gi|387515766|emb|CCH63199.1| hypothetical protein TBLA_0J02050 [Tetrapisispora blattae CBS 6284]
Length = 890
Score = 177 bits (449), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 91/190 (47%), Positives = 133/190 (70%), Gaps = 12/190 (6%)
Query: 197 ESELNRVIKKSMFEKMKIVGQFNLGFIIV------KYDSDLFIIDQHATDEKYNFETLQK 250
E L+ +KK F+ M+IVGQFNLGFIIV KYD LFI+DQHA+DEKYNFE LQ+
Sbjct: 676 EDYLSLSVKKDDFKTMEIVGQFNLGFIIVTRQIEDKYD--LFIVDQHASDEKYNFEKLQE 733
Query: 251 TTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDD-GN-VLLTSLPMSK 308
T+ KSQ+L+ P L L+ I++ I+ DN+ +F KNGF+ D + GN + L SLP+SK
Sbjct: 734 NTVFKSQRLIAPMMLELSVIDEMIVMDNIEIFIKNGFKIEIDEDGEIGNKIRLISLPVSK 793
Query: 309 NTTLGREDIEELLFMLQHTN--STEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLV 366
T ED+ EL+++++ ++ + ++ R S+IR+MFA RACR S+MIG+ L++ M +V
Sbjct: 794 KTLFDIEDLYELIYLIKESDGLNKDNIRCSKIRSMFAMRACRSSIMIGKPLTMNSMVRVV 853
Query: 367 RNMGRIDQPW 376
R++G +D+PW
Sbjct: 854 RHLGELDKPW 863
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 37/54 (68%)
Query: 1 MKLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVK 54
+K NE+Y FNN Q+P + LN E+ +DVNVTPDKR + + +E++++ ++
Sbjct: 297 LKNCNEIYRMFNNVQFPALFLNFELMPSLIDVNVTPDKRTVLLHYEQIIVDVLR 350
>gi|71006946|ref|XP_758079.1| hypothetical protein UM01932.1 [Ustilago maydis 521]
gi|46097153|gb|EAK82386.1| hypothetical protein UM01932.1 [Ustilago maydis 521]
Length = 971
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 91/207 (43%), Positives = 129/207 (62%), Gaps = 16/207 (7%)
Query: 186 ANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDS----------DLFIID 235
A ++ + E L+RVI K F M+++GQFNLGFII + + DLFI+D
Sbjct: 722 AGVENQDEAQVERALSRVIHKDDFAAMEVIGQFNLGFIIARRRTRPDSSSHDMDDLFIVD 781
Query: 236 QHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSD 295
QHA+DEK+NFETLQ TT I+SQKL+VP+ L L+ ++ + ++ NGF+ S +
Sbjct: 782 QHASDEKFNFETLQLTTQIRSQKLIVPRPLELSASDELVAIEHQETLLSNGFDISVSETG 841
Query: 296 --DGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHC----RPSRIRAMFASRACRK 349
L + P+SK T G +D+EELL++L+ T++ R S+ RAMFASRACRK
Sbjct: 842 LPGTRAKLVAQPISKATVFGVKDLEELLYLLRDTSAGSEAARSIRCSKARAMFASRACRK 901
Query: 350 SVMIGRALSVGEMTGLVRNMGRIDQPW 376
S+MIG AL+ G M ++ NMG I+QPW
Sbjct: 902 SIMIGTALTRGRMKSVLNNMGTIEQPW 928
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 38/61 (62%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
+ NEVY +N++ +PF+ + + DS DVN+TPDKR IF+ E L+ VK + + +
Sbjct: 332 RAFNEVYKSYNSNHFPFVAADFRLPTDSYDVNITPDKRTIFLHEENRLIEKVKQALEELF 391
Query: 62 A 62
A
Sbjct: 392 A 392
>gi|355747495|gb|EHH51992.1| PMS2 like protein, partial [Macaca fascicularis]
Length = 747
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/150 (56%), Positives = 111/150 (74%), Gaps = 3/150 (2%)
Query: 204 IKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQ 263
+ K+MF +M+IVGQFNLGFII K + DLFI+DQHATDEKYNFE LQ+ T+++ Q+L+ PQ
Sbjct: 599 VSKTMFAEMEIVGQFNLGFIITKLNEDLFIVDQHATDEKYNFEMLQQHTVLQGQRLIAPQ 658
Query: 264 NLHLTKINQCILKDNLPVFYKNGFEFSFDSSD--DGNVLLTSLPMSKNTTLGREDIEELL 321
L+LT +N+ +L +NL +F KNGF+F D + L SLP SKN T G +DI+EL+
Sbjct: 659 TLNLTAVNEAVLIENLEIFRKNGFDFVIDENAPVTERAKLISLPTSKNWTFGPQDIDELI 718
Query: 322 FMLQHTNSTEHCRPSRIRAMFASRACRKSV 351
F+L + CRPSR++ MFASRACRKSV
Sbjct: 719 FLLSDSPGV-MCRPSRVKQMFASRACRKSV 747
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 57/85 (67%), Gaps = 8/85 (9%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
+LVNEVYH +N HQYPF++LNI + + VD+NVTPDKRQI + EKLLLA +K +
Sbjct: 296 RLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSL---- 351
Query: 62 AIG-FTVDGNNMNQSMEQDPSSDVD 85
IG F D N +N S Q P D++
Sbjct: 352 -IGMFDSDVNKLNVS--QQPLLDIE 373
>gi|366995507|ref|XP_003677517.1| hypothetical protein NCAS_0G02780 [Naumovozyma castellii CBS 4309]
gi|342303386|emb|CCC71165.1| hypothetical protein NCAS_0G02780 [Naumovozyma castellii CBS 4309]
Length = 855
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 89/185 (48%), Positives = 130/185 (70%), Gaps = 8/185 (4%)
Query: 200 LNRVIKKSMFEKMKIVGQFNLGFIIV--KYDS--DLFIIDQHATDEKYNFETLQKTTLIK 255
L +KK F+KM I+GQFNLGFI+V K D+ DLFI+DQHA+DEKYNFE LQK T+
Sbjct: 644 LTLTVKKPDFKKMVIIGQFNLGFIVVTRKLDNKYDLFIVDQHASDEKYNFEMLQKETVFN 703
Query: 256 SQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSF--DSSDDGNVLLTSLPMSKNTTLG 313
SQ+L+ PQ + L+ I++ ++ DN VF KNGF+ S D++ + L SLP+SK T G
Sbjct: 704 SQRLIAPQPMDLSIIDELVVIDNKQVFEKNGFKLSIDEDAAQGRKIKLLSLPVSKKTVFG 763
Query: 314 REDIEELLFMLQHTNSTEH--CRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGR 371
+D +EL+ +++ N++++ R S+IR+MFA RACR S+MIG+ L+ MT +V ++G
Sbjct: 764 LDDFDELIHLVKENNTSDNGTIRCSKIRSMFAMRACRSSIMIGKPLTTKIMTRVVHHLGD 823
Query: 372 IDQPW 376
+D+PW
Sbjct: 824 LDKPW 828
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 41/60 (68%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K N+VY FNN Q P I LN+E+S VDVNVTPDKR + + +EKL++ +K +T+ +
Sbjct: 298 KCCNDVYRLFNNVQNPAIFLNLEVSPSLVDVNVTPDKRTVLLHNEKLVMDLIKTSLTEYF 357
>gi|401623858|gb|EJS41939.1| pms1p [Saccharomyces arboricola H-6]
Length = 879
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 94/205 (45%), Positives = 131/205 (63%), Gaps = 13/205 (6%)
Query: 185 HANIDPSKNK-----EAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYD----SDLFIID 235
H NI +K K + E L + K F+KM++VGQFNLGFIIV DLFI+D
Sbjct: 648 HKNIINNKEKLEDFEKGEKYLTLTVSKDDFKKMEVVGQFNLGFIIVTRKIGDKDDLFIVD 707
Query: 236 QHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSD 295
QHA+DEKYNFETLQ T+ KSQKL++PQ + L+ I++ ++ DNLPVF KNGF+ D +
Sbjct: 708 QHASDEKYNFETLQAVTVFKSQKLIIPQPVDLSVIDELVVLDNLPVFEKNGFKLKIDEEE 767
Query: 296 D--GNVLLTSLPMSKNTTLGREDIEELLFMLQHTNST--EHCRPSRIRAMFASRACRKSV 351
+ + L SLP SK T +D EL+ +++ ++ R S+IR+MFA RACR S+
Sbjct: 768 EFGSRIKLLSLPSSKQTLFDLDDFNELIHLIKEDGGLRRDNIRCSKIRSMFAMRACRSSI 827
Query: 352 MIGRALSVGEMTGLVRNMGRIDQPW 376
MIG+ L+ MT +V N+ +D+PW
Sbjct: 828 MIGKPLNKKTMTRVVHNLSGLDKPW 852
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 42/61 (68%)
Query: 1 MKLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
+K NEVY FNN Q+P + LN+E+ +DVNVTPDKR I + +E++++ K ++TD
Sbjct: 296 LKCCNEVYKTFNNVQFPVVFLNLELPPSLIDVNVTPDKRIILLHNEQVVIDVFKANLTDY 355
Query: 61 Y 61
Y
Sbjct: 356 Y 356
>gi|429849239|gb|ELA24642.1| DNA mismatch repair protein pms1 [Colletotrichum gloeosporioides Nara
gc5]
Length = 1050
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/205 (47%), Positives = 132/205 (64%), Gaps = 20/205 (9%)
Query: 192 KNKEAESELNRVIKKSMFEKMKIVGQFNLGFII-VKY------------DSDLFIIDQHA 238
++++AE L+ +I K+ F M IVGQFNLGFII V+Y D +LFIIDQHA
Sbjct: 808 ESQDAEEVLSLIITKADFGNMTIVGQFNLGFIIAVRYASGKGDGGSSSSDDELFIIDQHA 867
Query: 239 TDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGN 298
+DEKYNFE LQ TT+++SQ+LV P+ L LT + + I+ +N+ NGF+ D S +
Sbjct: 868 SDEKYNFERLQSTTVVQSQRLVHPKQLELTALEEEIVMENIAALNTNGFQLDVDRSGNQP 927
Query: 299 V----LLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHC---RPSRIRAMFASRACRKSV 351
V L +LP+S TT D+EEL+ +L S E RPS++R+MFA RACR SV
Sbjct: 928 VGLRCKLLALPLSHGTTFTLSDLEELISLLGDHQSNEGVSAPRPSKVRSMFAMRACRSSV 987
Query: 352 MIGRALSVGEMTGLVRNMGRIDQPW 376
MIGRAL+ +M LVR+MG +D+PW
Sbjct: 988 MIGRALAHQQMEKLVRHMGELDKPW 1012
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHIT 58
K+ NEVY +N+ Q PFI +I++ DVNV+PDKR I + + +L ++ +T
Sbjct: 294 KVFNEVYKGYNSSQSPFIFADIQLDTHLYDVNVSPDKRTILLHDQNRMLENLREALT 350
>gi|322707643|gb|EFY99221.1| putative DNA mismatch repair protein PMS1 [Metarhizium anisopliae
ARSEF 23]
Length = 1106
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 94/201 (46%), Positives = 129/201 (64%), Gaps = 19/201 (9%)
Query: 195 EAESELNRVIKKSMFEKMKIVGQFNLGFIIV------------KYDSD-LFIIDQHATDE 241
+AES+L +I K F KM++VGQFNLGFII D+D LFIIDQHA+DE
Sbjct: 842 DAESKLPLIIAKDDFSKMRVVGQFNLGFIIAVRPKSHRHTCHEADDADELFIIDQHASDE 901
Query: 242 KYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNV-- 299
K+NFE LQ T+I+SQ+LV P+ L LT + + I+ NLP NGF+ DS+ V
Sbjct: 902 KFNFERLQVNTVIQSQRLVYPKALQLTALEEEIVLGNLPALEANGFKIQVDSTGGSPVGA 961
Query: 300 --LLTSLPMSKNTTLGREDIEELLFML-QHTNSTEHC-RPSRIRAMFASRACRKSVMIGR 355
L +LP+S+ T D+EEL+ +L + ++ + H RPSR+R MFA RACR S+MIG+
Sbjct: 962 RCQLLALPLSREVTFTLNDLEELITLLAEESSGSRHIPRPSRVRKMFAMRACRSSIMIGK 1021
Query: 356 ALSVGEMTGLVRNMGRIDQPW 376
L+ +M LVR+MG +D+PW
Sbjct: 1022 PLTTSQMYSLVRHMGELDKPW 1042
Score = 45.1 bits (105), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFM 43
K NEVY +N Q PFI ++++ DVNV+PDKR I +
Sbjct: 366 KTFNEVYKAYNISQSPFIFADVQLDTKMYDVNVSPDKRSILL 407
>gi|281205683|gb|EFA79872.1| MutL DNA mismatch repair protein [Polysphondylium pallidum PN500]
Length = 945
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/185 (47%), Positives = 122/185 (65%), Gaps = 4/185 (2%)
Query: 196 AESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIK 255
A+SEL R KK F+ M I+GQFN GFII + DLFIIDQHA DEKYN+E+LQK+ +I
Sbjct: 678 AQSELTRFFKKEYFKDMSIIGQFNKGFIITRLGMDLFIIDQHAADEKYNYESLQKSHVIS 737
Query: 256 SQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSD--DGNVLLTSLPMSKNTTLG 313
SQ + P + +LT ++ I+ D++ +F KNGFEF D + V LT+ P S T G
Sbjct: 738 SQPYIKPISFNLTVDDESIIIDHISIFKKNGFEFQIDEAAPPKYKVKLTAFPHSNKTEFG 797
Query: 314 REDIEELLFML--QHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGR 371
+D+ EL+ ++ Q E+ R SR+ AMFASRACRKS+M+G +L+V EM ++ N+
Sbjct: 798 PDDVYELITLIKDQAMIGLENIRLSRVSAMFASRACRKSIMVGTSLTVPEMKKILDNLST 857
Query: 372 IDQPW 376
+D PW
Sbjct: 858 LDNPW 862
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K++N +Y F YP I LN+ + DVNVTPDKR++F+ E L+ VK + +
Sbjct: 341 KVINGLYQTFCKKGSYPMIFLNVIADPTTYDVNVTPDKRKVFLQKELQLVNLVKDKLKST 400
Query: 61 YAIG---FTVDGNNMNQ 74
+ F + +NMN+
Sbjct: 401 WESAQSSFDISSSNMNE 417
>gi|302806844|ref|XP_002985153.1| hypothetical protein SELMODRAFT_121896 [Selaginella moellendorffii]
gi|300146981|gb|EFJ13647.1| hypothetical protein SELMODRAFT_121896 [Selaginella moellendorffii]
Length = 722
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/169 (50%), Positives = 120/169 (71%), Gaps = 5/169 (2%)
Query: 213 KIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQ 272
KI+GQFNLGFII + DSDLFIIDQHA+DEKYNFE L K+T++ Q L+ P LHL+ +
Sbjct: 529 KIIGQFNLGFIIARLDSDLFIIDQHASDEKYNFERLSKSTVLNRQPLLRPMPLHLSSAEE 588
Query: 273 CILKDNLPVFYKNGFEFS--FDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQ--HTN 328
I+ ++ VF +NGF+F+ D+ +LL+++P SKN T G D++EL+ +L + +
Sbjct: 589 IIISTHMEVFRQNGFDFTEQEDAPPGQRILLSAVPFSKNVTFGVSDVQELVSLLSEDYGS 648
Query: 329 STEH-CRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
S+ H +PSR+R+M ASRACR S+MIG ALS EM +VR++ +D PW
Sbjct: 649 SSSHLVQPSRVRSMLASRACRSSIMIGDALSKKEMEKVVRHLADLDAPW 697
>gi|440634192|gb|ELR04111.1| hypothetical protein GMDG_01415 [Geomyces destructans 20631-21]
Length = 1087
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/197 (47%), Positives = 123/197 (62%), Gaps = 17/197 (8%)
Query: 195 EAESELNRVIKKSMFEKMKIVGQFNLGFIIV-----------KYDSDLFIIDQHATDEKY 243
+AE +L+ I KS F KMKI+GQFNLGFI+ K D+FIIDQHA+DEKY
Sbjct: 843 DAEEKLSLTIHKSDFAKMKIIGQFNLGFILASRTSHGSDSTNKASDDVFIIDQHASDEKY 902
Query: 244 NFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVL--- 300
NFE LQ +T ++SQ+LV P+ L LT + + I+ ++L NGF S D D V
Sbjct: 903 NFERLQASTTVQSQRLVQPKPLSLTAVEEEIVIEHLDALETNGFLLSIDH--DAPVGERC 960
Query: 301 -LTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSV 359
L +LP+S+ TT D+EEL+ +L + RPS++R MFA RACR SVMIGR L+
Sbjct: 961 HLVALPLSRETTFSLSDLEELIVLLTEAPPGQIPRPSKVRKMFAMRACRSSVMIGRTLTT 1020
Query: 360 GEMTGLVRNMGRIDQPW 376
+M LV +MG ID+PW
Sbjct: 1021 KQMAKLVGHMGEIDKPW 1037
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K NEVY +NN+Q PFI NIE+ DVNV+PDKR I + + +L +K+ +T+ +
Sbjct: 296 KAFNEVYKSYNNNQSPFIFANIELETHLYDVNVSPDKRTIMLHEQNSMLEQLKLSLTELF 355
>gi|50291023|ref|XP_447944.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527255|emb|CAG60895.1| unnamed protein product [Candida glabrata]
Length = 907
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/185 (47%), Positives = 128/185 (69%), Gaps = 8/185 (4%)
Query: 200 LNRVIKKSMFEKMKIVGQFNLGFIIVKYD----SDLFIIDQHATDEKYNFETLQKTTLIK 255
L+ +KKS F+ MK+VGQFNLGFI+V + DLFI+DQHA+DEK+NFE LQ+TT K
Sbjct: 696 LSLSVKKSDFKDMKVVGQFNLGFILVTRNMGSNYDLFIVDQHASDEKFNFENLQQTTRFK 755
Query: 256 SQKLVVPQNLHLTKINQCILKDNLPVFYKNGF--EFSFDSSDDGNVLLTSLPMSKNTTLG 313
SQKL+ P+ + L+ I++ I+ DNL VF +NGF E D+ V L S+P+SK T G
Sbjct: 756 SQKLISPETIELSVIDELIVMDNLSVFERNGFKIEIDEDAMAGHKVKLISIPVSKRTIFG 815
Query: 314 REDIEELLFMLQHTNST--EHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGR 371
D +EL+++++ T + + S+IRAMFA RACR S+M+G+ L++ MT +V+N+
Sbjct: 816 VADFQELVYLIKEDGGTNKSNIKCSKIRAMFAMRACRSSIMVGKPLNMRTMTRVVQNLST 875
Query: 372 IDQPW 376
+D+PW
Sbjct: 876 LDKPW 880
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 42/61 (68%)
Query: 1 MKLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
+K NEVY +NN QYP ILN E++ D +DVN+TPDKR + + +E+ ++ + +++D
Sbjct: 296 VKCCNEVYRTYNNVQYPMFILNFELTPDLIDVNITPDKRTVVLHNEQSVIDVLYENLSDY 355
Query: 61 Y 61
+
Sbjct: 356 F 356
>gi|322694251|gb|EFY86086.1| putative DNA mismatch repair protein PMS1 [Metarhizium acridum CQMa
102]
Length = 791
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/201 (46%), Positives = 132/201 (65%), Gaps = 19/201 (9%)
Query: 195 EAESELNRVIKKSMFEKMKIVGQFNLGFII-VKYDS------------DLFIIDQHATDE 241
+AES+L +I K F KM++VGQFNLGFII V+ S +LFIIDQHA+DE
Sbjct: 548 DAESKLPLIIAKDDFSKMRVVGQFNLGFIIAVRPKSHRHTCREADDVDELFIIDQHASDE 607
Query: 242 KYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNV-- 299
K+NFE LQ T+I+SQ+LV P++L LT + + I+ +NLP NGF+ DS+ V
Sbjct: 608 KFNFERLQANTVIQSQRLVYPKSLQLTALEEEIVLENLPALEANGFKIQVDSTGGSPVGA 667
Query: 300 --LLTSLPMSKNTTLGREDIEELLFML-QHTNSTEHC-RPSRIRAMFASRACRKSVMIGR 355
L +LP+S+ T D+EEL+ +L + ++ + H RPSR+R MFA RACR S+MIG+
Sbjct: 668 RCQLLALPLSREVTFTLNDLEELIALLAEESSGSRHIPRPSRVRKMFAMRACRSSIMIGK 727
Query: 356 ALSVGEMTGLVRNMGRIDQPW 376
L+ +M L+R+MG +D+PW
Sbjct: 728 PLTANQMYLLLRHMGELDKPW 748
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 18/118 (15%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFM------------------ 43
K NEVY +N Q PFI N+++ + DVNV+PDKR I +
Sbjct: 72 KTFNEVYKAYNISQSPFIFANVQLDTNMYDVNVSPDKRSILLHDQSLLLDRLRSSLVRLF 131
Query: 44 DHEKLLLATVKVHITDSYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHET 101
D L T +V T++ +VD N + S+ ++ S ++ ++ E + E+
Sbjct: 132 DSHDYQLPTTQVLTTETPGCPASVDANRRSISLIRENSPHASESELSAASHSESDGES 189
>gi|392563903|gb|EIW57082.1| DNA mismatch repair protein MutL [Trametes versicolor FP-101664 SS1]
Length = 1096
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 94/202 (46%), Positives = 126/202 (62%), Gaps = 18/202 (8%)
Query: 193 NKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDS----------------DLFIIDQ 236
++EA L+RVI K+ F M+++GQFN GFIIV+ DLFI+DQ
Sbjct: 855 DEEATEVLSRVIDKADFATMEVLGQFNRGFIIVRRRKTIRANSEEEGPGVEMDDLFIVDQ 914
Query: 237 HATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSF--DSS 294
HA DEKYNFETLQ+TT I SQKL PQ L LT ++ + +N+ V +NGFE + D
Sbjct: 915 HAADEKYNFETLQQTTKIDSQKLFHPQVLELTAADELVALENVDVLRQNGFELAVCEDRP 974
Query: 295 DDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIG 354
V L + P+SK+T +D+EELL +LQ + + R S+ RAMFA RACR S+MIG
Sbjct: 975 PGQRVQLEARPISKSTVFDTKDLEELLHLLQDCPAGQMVRCSKARAMFAMRACRMSIMIG 1034
Query: 355 RALSVGEMTGLVRNMGRIDQPW 376
LS +MT +V++MG +DQPW
Sbjct: 1035 TPLSRRQMTSVVQHMGTMDQPW 1056
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 36/61 (59%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K NEVY FN Q PFII + + +S D+NV+PDKR I + E L+ ++ + + Y
Sbjct: 310 KAFNEVYRSFNATQSPFIIADFVLPTNSCDINVSPDKRTILLHSENHLVQALRAALEEKY 369
Query: 62 A 62
A
Sbjct: 370 A 370
>gi|296412633|ref|XP_002836027.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629827|emb|CAZ80184.1| unnamed protein product [Tuber melanosporum]
Length = 1023
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/183 (45%), Positives = 119/183 (65%), Gaps = 2/183 (1%)
Query: 196 AESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIK 255
AE LN + K F +M+I GQFN GFI+ DLFIIDQHA+DEKYNFE LQ+ T+++
Sbjct: 790 AEERLNLAVTKQDFFEMQIKGQFNKGFILATRADDLFIIDQHASDEKYNFEKLQQVTIVQ 849
Query: 256 SQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSD--DGNVLLTSLPMSKNTTLG 313
+Q+L VP+ L L +++ ++ D++ F KNGF D+ L SLP+SK T G
Sbjct: 850 NQRLAVPKKLDLMAVDEIVVIDHIDTFKKNGFVIEVDTGAPVGEKCKLISLPISKETVFG 909
Query: 314 REDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRID 373
+D+EEL+ ++ R S++R MFA RACRKSVM+G+AL+ M LV++MG +D
Sbjct: 910 LDDLEELIHLISEDPGNSAVRCSKVRKMFAMRACRKSVMVGKALTEKGMEKLVKHMGELD 969
Query: 374 QPW 376
+PW
Sbjct: 970 KPW 972
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 40/60 (66%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
+ +NEVY FN Q PFI +I++ ++ DVNV+PDKR I + + ++ ++KV +TD +
Sbjct: 294 RAINEVYKHFNVTQSPFIFADIQLDTNAYDVNVSPDKRTILLHDQAEMMESLKVSLTDLF 353
>gi|254580625|ref|XP_002496298.1| ZYRO0C15180p [Zygosaccharomyces rouxii]
gi|238939189|emb|CAR27365.1| ZYRO0C15180p [Zygosaccharomyces rouxii]
Length = 913
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 91/191 (47%), Positives = 127/191 (66%), Gaps = 8/191 (4%)
Query: 194 KEAESELNRVIKKSMFEKMKIVGQFNLGFII----VKYDSDLFIIDQHATDEKYNFETLQ 249
+E E+ L IKKS F+ M+IVGQFNLGFII + + DLFI+DQHA+DEK+NFE LQ
Sbjct: 696 QEGENYLTLTIKKSDFDHMQIVGQFNLGFIICTRRIGSNYDLFIVDQHASDEKFNFENLQ 755
Query: 250 KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSF--DSSDDGNVLLTSLPMS 307
KTT+ KSQKL+ P ++ L+ I++ + DNL VF NGF+ D + V LTSLP+S
Sbjct: 756 KTTIFKSQKLIAPLDVDLSAIDELAVMDNLKVFENNGFKLCIQDDEIEGTKVQLTSLPVS 815
Query: 308 KNTTLGREDIEELLFMLQHTNST--EHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGL 365
KNT G +D EL+ +L+ + + S+IR+M A RACR S+MIG+ L+ M +
Sbjct: 816 KNTIFGIDDFYELVHLLKENQGINRDSIKCSKIRSMLAMRACRSSIMIGKPLTQKTMCKV 875
Query: 366 VRNMGRIDQPW 376
VR++ +D+PW
Sbjct: 876 VRHLSGLDKPW 886
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 39/61 (63%)
Query: 1 MKLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
++ NEVY FNN QYP LN E+S +D+NVTPDKR + + +EK ++ ++ +T
Sbjct: 296 IQCCNEVYKSFNNVQYPAFFLNFELSPQLIDINVTPDKRTVLLHNEKYVIDVLRETLTKY 355
Query: 61 Y 61
+
Sbjct: 356 F 356
>gi|409043020|gb|EKM52503.1| hypothetical protein PHACADRAFT_260955, partial [Phanerochaete
carnosa HHB-10118-sp]
Length = 364
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 95/199 (47%), Positives = 127/199 (63%), Gaps = 19/199 (9%)
Query: 197 ESELNRVIKKSMFEKMKIVGQFNLGFIIVK--------YDS-----DLFIIDQHATDEKY 243
E L+RVI K F M+I+GQFNLGFIIV+ DS DLFI+DQHA DEKY
Sbjct: 145 EEALSRVITKDDFASMEILGQFNLGFIIVRRYGVHAGSADSAFPVDDLFIVDQHAADEKY 204
Query: 244 NFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFD--SSDDG---- 297
NFETLQ+TT I SQ L+ P+ L LT ++ + +N+ + +NGFE + S + G
Sbjct: 205 NFETLQQTTKINSQALIRPKLLELTASDELLALENIDILRQNGFEIDTEGGSEEQGESRR 264
Query: 298 NVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRAL 357
+ L + P+SK+T +D+EELL +L+ + R S+ RAMFASRACRKSVM+G L
Sbjct: 265 RLRLVAQPVSKSTVFDIKDLEELLHLLRDRPRGQMVRCSKARAMFASRACRKSVMVGMPL 324
Query: 358 SVGEMTGLVRNMGRIDQPW 376
+MT +VR+MG +DQPW
Sbjct: 325 KTQQMTAIVRHMGTMDQPW 343
>gi|317146967|ref|XP_001821792.2| DNA mismatch repair protein (Pms1) [Aspergillus oryzae RIB40]
Length = 1071
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 100/249 (40%), Positives = 138/249 (55%), Gaps = 37/249 (14%)
Query: 153 VTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKM 212
+ L +D +Q++L+ + V +QD EN AE L+ + K F KM
Sbjct: 767 IQLQMDKLQERLRL-HGSNAVHSQDNEAENSLET---------AEERLSLTVSKDDFGKM 816
Query: 213 KIVGQFNLGFIIVKYDS-------------DLFIIDQHATDEKYNFETLQKTTLIKSQKL 259
+I GQFNLGFI+ S +LFIIDQHA+DEK+NFE LQ T++++Q+L
Sbjct: 817 RIAGQFNLGFILATRSSTGVSDSAPPSSKDELFIIDQHASDEKFNFERLQAETVVQNQRL 876
Query: 260 VVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGN------VLLTSLPMSKNTTLG 313
V P+ L LT + + I+ +N KNGF D D GN L SLP+SK G
Sbjct: 877 VQPKQLDLTAVEEEIVIENQSALEKNGFVVEVD--DSGNEPIGRRCKLVSLPLSKEVVFG 934
Query: 314 REDIEELLFMLQHTNSTEHC------RPSRIRAMFASRACRKSVMIGRALSVGEMTGLVR 367
D+EEL+ +L ++ RPS++R MFA RACR S+MIG+ LS +MT +VR
Sbjct: 935 VRDLEELIVLLSEMPASSTAGPMYVPRPSKVRKMFAMRACRSSIMIGKNLSQKQMTRVVR 994
Query: 368 NMGRIDQPW 376
NMG ID+PW
Sbjct: 995 NMGTIDKPW 1003
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHIT 58
K NEVY FN Q PF+ + M ++ DVNV+PDKR I + L+ ++K +T
Sbjct: 297 KAFNEVYKSFNVSQSPFVFADFHMDTNAYDVNVSPDKRTILLHDAGALIESLKTSLT 353
>gi|340513981|gb|EGR44253.1| predicted protein [Trichoderma reesei QM6a]
Length = 979
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 92/201 (45%), Positives = 129/201 (64%), Gaps = 20/201 (9%)
Query: 195 EAESELNRVIKKSMFEKMKIVGQFNLGFIIV-------------KYDSDLFIIDQHATDE 241
+AES+L +I K F +M+I+GQFNLGFII K+D +LFIIDQHA+DE
Sbjct: 737 DAESKLPLIISKGDFSRMRIIGQFNLGFIIAVKPANHTSSGTEAKHD-ELFIIDQHASDE 795
Query: 242 KYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSD----DG 297
KYN+E LQ+TT I+SQ+LV P+ L LT + + I+ +N NGF+ D+S
Sbjct: 796 KYNYERLQRTTEIQSQRLVHPKRLQLTALEEEIILENAAALNANGFKVETDTSGRFPVGA 855
Query: 298 NVLLTSLPMSKNTTLGREDIEELLFML--QHTNSTEHCRPSRIRAMFASRACRKSVMIGR 355
LTSLP+S+ T ED+EEL+ +L + + ST RPS++R M A RACR S+MIG+
Sbjct: 856 RCQLTSLPLSREVTFKLEDLEELISLLGDKFSESTYIPRPSKVRKMLAMRACRSSIMIGK 915
Query: 356 ALSVGEMTGLVRNMGRIDQPW 376
A++ +M LV +MG +D+PW
Sbjct: 916 AMTRSQMYTLVNHMGELDKPW 936
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHIT--- 58
K+ NEVY +NN Q PFI ++++ DVNV+PDKR I + + LL T++V ++
Sbjct: 297 KVFNEVYRSYNNSQSPFIFADVQLDTMLYDVNVSPDKRSILLHDQNTLLDTLRVSLSQLF 356
Query: 59 ----DSYAIGFTVDGNNMNQSMEQ 78
DS +I + G + S ++
Sbjct: 357 DTQEDSISIATSTQGTKVQTSHDK 380
>gi|425767820|gb|EKV06374.1| DNA mismatch repair protein (Pms1), putative [Penicillium digitatum
Pd1]
gi|425769616|gb|EKV08106.1| DNA mismatch repair protein (Pms1), putative [Penicillium digitatum
PHI26]
Length = 1000
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 91/195 (46%), Positives = 127/195 (65%), Gaps = 12/195 (6%)
Query: 194 KEAESELNRVIKKSMFEKMKIVGQFNLGFII-VKYDSD---LFIIDQHATDEKYNFETLQ 249
K AE +L+ + K+ F M+I+GQFNLGFII V+ D LFIIDQHA+DEK+NFE LQ
Sbjct: 755 KTAEDKLSLTVSKTDFAHMRIIGQFNLGFIIAVRPGEDRDELFIIDQHASDEKFNFERLQ 814
Query: 250 KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNV----LLTSLP 305
T++++Q+LV PQ L LT + + ++ +N KNGF + D S D + L SLP
Sbjct: 815 AETVVQNQRLVRPQRLDLTAVEEEVVLENRAALEKNGFLVTVDESGDEPIGRRCQLVSLP 874
Query: 306 MSKNTTLGREDIEELLFMLQHTNSTEHC----RPSRIRAMFASRACRKSVMIGRALSVGE 361
+SK G D+EEL+ +L + ST + RPS++R MFA RACR S+MIG+ L+ +
Sbjct: 875 LSKEVVFGVRDLEELIVLLSESLSTSNGASIPRPSKVRKMFAMRACRSSIMIGKTLTSRQ 934
Query: 362 MTGLVRNMGRIDQPW 376
M +V+NMG ID+PW
Sbjct: 935 MERVVQNMGTIDKPW 949
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K NE+Y FN Q FI + +M ++ DVNV+PDKRQI + ++ T+K+ +T +
Sbjct: 294 KAFNEIYKSFNVSQSAFIFADFQMDTNAYDVNVSPDKRQILLHDAGAMIDTLKISLTQLF 353
>gi|403214451|emb|CCK68952.1| hypothetical protein KNAG_0B05200 [Kazachstania naganishii CBS
8797]
Length = 873
Score = 174 bits (440), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 126/192 (65%), Gaps = 9/192 (4%)
Query: 194 KEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDS-----DLFIIDQHATDEKYNFETL 248
+E + L + K FEKM IVGQFNLGFII + + DLFI+DQHA+DEKYNFETL
Sbjct: 654 EETDEYLTLTVNKQEFEKMMIVGQFNLGFIITRRVNPDGKFDLFIVDQHASDEKYNFETL 713
Query: 249 QKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGN--VLLTSLPM 306
Q+TT +SQ+L+VP+ + L I++ I+ DN+ VF NGF+ S + D + L S P
Sbjct: 714 QRTTKFQSQQLLVPRVIELPFIDELIVMDNINVFESNGFKLSIEEDDATGQRIKLMSFPY 773
Query: 307 SKNTTLGREDIEELLFMLQHTNST--EHCRPSRIRAMFASRACRKSVMIGRALSVGEMTG 364
SK T +D +ELL +++ N + H R S++RAMFA RACR S+MIG+ L+ M
Sbjct: 774 SKQTVFDMDDFDELLQLIKDQNGSPCSHVRCSKVRAMFAMRACRSSIMIGKPLTKTTMAR 833
Query: 365 LVRNMGRIDQPW 376
+V+++G +D+PW
Sbjct: 834 VVKHLGTLDKPW 845
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 40/61 (65%)
Query: 1 MKLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
+K N+VY FNN QYPFI+LN ++ +D+NVTPDKR + + +E+ ++ + H+
Sbjct: 297 LKNCNDVYRSFNNVQYPFILLNFQVDTRLIDINVTPDKRTVLLHNEQYVIDLFREHLLVY 356
Query: 61 Y 61
Y
Sbjct: 357 Y 357
>gi|406864738|gb|EKD17782.1| DNA mismatch repair protein MutL [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1135
Score = 174 bits (440), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 91/202 (45%), Positives = 130/202 (64%), Gaps = 18/202 (8%)
Query: 193 NKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDS------------DLFIIDQHATD 240
+ +AE +L+ +I KS F KMKIVGQFNLGFI+ S D+FIIDQHA+D
Sbjct: 838 SAQAEEKLSLIISKSDFAKMKIVGQFNLGFILATRASGSKCEDGVMTADDMFIIDQHASD 897
Query: 241 EKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNV- 299
EKYNFE L TT+++SQ+LV P+ L LT + + I+ +NL NGF + D + + V
Sbjct: 898 EKYNFERLYATTIVQSQRLVYPKTLDLTALEEEIVMENLSALETNGFIITVDETGESPVG 957
Query: 300 ---LLTSLPMSKNTTLGREDIEELLFML-QHTNSTEHC-RPSRIRAMFASRACRKSVMIG 354
LTSLP+S+ T D+EEL+ +L +++ T RPS++R MFA RACR S+MIG
Sbjct: 958 KRCQLTSLPISRETAFSLTDLEELIALLAEYSPGTGPVPRPSKMRKMFAMRACRSSIMIG 1017
Query: 355 RALSVGEMTGLVRNMGRIDQPW 376
+ L+ +M +VR++G +D+PW
Sbjct: 1018 KTLTGRQMGKVVRHLGELDKPW 1039
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 33/57 (57%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHIT 58
K NEVY +N Q PFI NIE+ DVNV+PDKR I + + +L +K +T
Sbjct: 296 KAFNEVYKAYNGTQSPFIFANIELDTHLYDVNVSPDKRTILLHDQNRMLENLKEELT 352
>gi|448114216|ref|XP_004202519.1| Piso0_001357 [Millerozyma farinosa CBS 7064]
gi|359383387|emb|CCE79303.1| Piso0_001357 [Millerozyma farinosa CBS 7064]
Length = 968
Score = 174 bits (440), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 100/237 (42%), Positives = 147/237 (62%), Gaps = 10/237 (4%)
Query: 149 QSTPVTLSLD---IIQDQLKARYAR-RTVQAQDRCVENRFHANIDPSKNKEAESELNRVI 204
ST TL++D + L +++A + ++ +D E R + D K+A+ +L I
Sbjct: 705 HSTVFTLAIDKNDFRNNWLLSKHASIQLLKQKDSYKETRLTVD-DIMSEKKAQEKLTYTI 763
Query: 205 KKSMFEKMKIVGQFNLGFIIVKYDSD-LFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQ 263
KS F +MK++GQFNLGF++V +S+ LFIIDQHA+DEKYNFE L T+ KSQ LV+PQ
Sbjct: 764 SKSDFSRMKLIGQFNLGFVLVTLNSNNLFIIDQHASDEKYNFERLNSNTIFKSQHLVIPQ 823
Query: 264 NLHLTKINQCILKDNLPVFYKNGFEFSF--DSSDDGNVLLTSLPMSKNTTLGREDIEELL 321
L L I++ + DN+ F KNGF S ++S + L +LP S++ T D ELL
Sbjct: 824 VLELNIIDEMTVMDNMEAFRKNGFVLSINEENSPGRRIQLLALPNSESVTFDTGDFYELL 883
Query: 322 FMLQHTNSTE--HCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
++ N+T R S+IRA+FA RACR S+MIG+ LS M+ ++RN+G +D+PW
Sbjct: 884 HLINTGNTTNPGSIRCSKIRALFAMRACRGSIMIGQHLSRKTMSNVIRNLGLLDKPW 940
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 1 MKLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVK 54
+K +NEVY +N+ QYP ++LNI + +DVNVTPDKR I + +E ++ +K
Sbjct: 297 LKTINEVYKSYNHVQYPVVVLNIIIDTKFLDVNVTPDKRTILIHNENIVHDVLK 350
>gi|83769655|dbj|BAE59790.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 866
Score = 174 bits (440), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 100/249 (40%), Positives = 138/249 (55%), Gaps = 37/249 (14%)
Query: 153 VTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKM 212
+ L +D +Q++L+ + V +QD EN AE L+ + K F KM
Sbjct: 608 IQLQMDKLQERLRL-HGSNAVHSQDNEAENSLET---------AEERLSLTVSKDDFGKM 657
Query: 213 KIVGQFNLGFIIVKYDS-------------DLFIIDQHATDEKYNFETLQKTTLIKSQKL 259
+I GQFNLGFI+ S +LFIIDQHA+DEK+NFE LQ T++++Q+L
Sbjct: 658 RIAGQFNLGFILATRSSTGVSDSAPPSSKDELFIIDQHASDEKFNFERLQAETVVQNQRL 717
Query: 260 VVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGN------VLLTSLPMSKNTTLG 313
V P+ L LT + + I+ +N KNGF D D GN L SLP+SK G
Sbjct: 718 VQPKQLDLTAVEEEIVIENQSALEKNGFVVEVD--DSGNEPIGRRCKLVSLPLSKEVVFG 775
Query: 314 REDIEELLFMLQHTNSTEHC------RPSRIRAMFASRACRKSVMIGRALSVGEMTGLVR 367
D+EEL+ +L ++ RPS++R MFA RACR S+MIG+ LS +MT +VR
Sbjct: 776 VRDLEELIVLLSEMPASSTAGPMYVPRPSKVRKMFAMRACRSSIMIGKNLSQKQMTRVVR 835
Query: 368 NMGRIDQPW 376
NMG ID+PW
Sbjct: 836 NMGTIDKPW 844
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K NEVY FN Q PF+ + M ++ DVNV+PDKR I + L+ ++K +T +
Sbjct: 295 KAFNEVYKSFNVSQSPFVFADFHMDTNAYDVNVSPDKRTILLHDAGALIESLKTSLTQLF 354
>gi|391869867|gb|EIT79060.1| DNA mismatch repair protein [Aspergillus oryzae 3.042]
Length = 870
Score = 174 bits (440), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 100/249 (40%), Positives = 138/249 (55%), Gaps = 37/249 (14%)
Query: 153 VTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKM 212
+ L +D +Q++L+ + V +QD EN AE L+ + K F KM
Sbjct: 612 IQLQMDKLQERLRL-HGSNAVHSQDNEAENSLET---------AEERLSLTVSKDDFGKM 661
Query: 213 KIVGQFNLGFIIVKYDS-------------DLFIIDQHATDEKYNFETLQKTTLIKSQKL 259
+I GQFNLGFI+ S +LFIIDQHA+DEK+NFE LQ T++++Q+L
Sbjct: 662 RIAGQFNLGFILATRSSTGVSDSAPPSSKDELFIIDQHASDEKFNFERLQAETVVQNQRL 721
Query: 260 VVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGN------VLLTSLPMSKNTTLG 313
V P+ L LT + + I+ +N KNGF D D GN L SLP+SK G
Sbjct: 722 VQPKQLDLTAVEEEIVIENQSALEKNGFVVEVD--DSGNEPIGRRCKLVSLPLSKEVVFG 779
Query: 314 REDIEELLFMLQHTNSTEHC------RPSRIRAMFASRACRKSVMIGRALSVGEMTGLVR 367
D+EEL+ +L ++ RPS++R MFA RACR S+MIG+ LS +MT +VR
Sbjct: 780 VRDLEELIVLLSEMPASSTAGPMYVPRPSKVRKMFAMRACRSSIMIGKNLSQKQMTRVVR 839
Query: 368 NMGRIDQPW 376
NMG ID+PW
Sbjct: 840 NMGTIDKPW 848
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K NEVY FN Q PF+ + M ++ DVNV+PDKR I + L+ ++K +T +
Sbjct: 295 KAFNEVYKSFNVSQSPFVFADFHMDTNAYDVNVSPDKRTILLHDAGALIESLKTSLTQLF 354
>gi|302772799|ref|XP_002969817.1| hypothetical protein SELMODRAFT_171139 [Selaginella moellendorffii]
gi|300162328|gb|EFJ28941.1| hypothetical protein SELMODRAFT_171139 [Selaginella moellendorffii]
Length = 705
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 84/169 (49%), Positives = 119/169 (70%), Gaps = 5/169 (2%)
Query: 213 KIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQ 272
KI+GQFNLGFII + DSDLFIIDQHA+DEKYNFE L K+T++ Q L+ P LHL+ +
Sbjct: 512 KILGQFNLGFIIARLDSDLFIIDQHASDEKYNFERLSKSTVLNRQPLLRPMPLHLSSAEE 571
Query: 273 CILKDNLPVFYKNGFEFS--FDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQ--HTN 328
+ ++ VF +NGF+F+ D+ +LL+++P SKN T G D++EL+ +L + +
Sbjct: 572 ITISTHMEVFRQNGFDFTEQEDAPPGQRILLSAVPFSKNVTFGVSDVQELVSLLSEDYGS 631
Query: 329 STEH-CRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
S+ H +PSR+R+M ASRACR S+MIG ALS EM +VR++ +D PW
Sbjct: 632 SSSHLVQPSRVRSMLASRACRSSIMIGDALSKKEMEKVVRHLADLDAPW 680
>gi|358382560|gb|EHK20231.1| hypothetical protein TRIVIDRAFT_48473 [Trichoderma virens Gv29-8]
Length = 961
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 92/201 (45%), Positives = 130/201 (64%), Gaps = 20/201 (9%)
Query: 195 EAESELNRVIKKSMFEKMKIVGQFNLGFIIV-------------KYDSDLFIIDQHATDE 241
+AES L +I K F KM+I+GQFNLGFII KYD +LFIIDQHA+DE
Sbjct: 719 DAESRLPLIISKGDFSKMRIIGQFNLGFIIAVKPASRLGSGVEGKYD-ELFIIDQHASDE 777
Query: 242 KYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNV-- 299
KYN+E LQ TT I+SQ+LV P+ L LT + + I+ +N NGF+ + D++ +V
Sbjct: 778 KYNYEKLQNTTEIQSQRLVHPKRLQLTALEEEIILENATALNANGFKVNIDTTGRFSVGS 837
Query: 300 --LLTSLPMSKNTTLGREDIEELLFML--QHTNSTEHCRPSRIRAMFASRACRKSVMIGR 355
LTSLP+S+ T +D+EEL+ +L + S+ RPS+++ MFA RACR S+MIG+
Sbjct: 838 RCQLTSLPLSREVTFKLDDLEELISLLGDKSAESSYIPRPSKVQKMFAMRACRSSIMIGK 897
Query: 356 ALSVGEMTGLVRNMGRIDQPW 376
A++ +M LV +MG +D+PW
Sbjct: 898 AMTKSQMHSLVNHMGELDKPW 918
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHIT 58
K NEVY +NN Q PFI ++++ DVNV+PDKR I + + LL T++ ++
Sbjct: 297 KAFNEVYRSYNNSQSPFIFADVQLDTMLYDVNVSPDKRSILLHDQNNLLDTLRSSLS 353
>gi|448111660|ref|XP_004201894.1| Piso0_001357 [Millerozyma farinosa CBS 7064]
gi|359464883|emb|CCE88588.1| Piso0_001357 [Millerozyma farinosa CBS 7064]
Length = 968
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/205 (45%), Positives = 130/205 (63%), Gaps = 6/205 (2%)
Query: 177 DRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSD-LFIID 235
D C E + + D K+A+ +L I KS F KMK++GQFNLGF++V +S+ LFIID
Sbjct: 737 DSCKETKLTVD-DIMSEKKAQDKLAYTISKSDFSKMKLIGQFNLGFVLVTLNSNNLFIID 795
Query: 236 QHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSF--DS 293
QHA+DEKYNFE L T+ KSQ LV+PQ L L I++ + DN+ F KNGF S ++
Sbjct: 796 QHASDEKYNFERLNSNTVFKSQHLVIPQVLELNIIDEMTVMDNMEAFRKNGFVLSINEEN 855
Query: 294 SDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTE--HCRPSRIRAMFASRACRKSV 351
S + L +LP S++ T D ELL ++ N+ R S+IRA+FA RACR S+
Sbjct: 856 SPGRRIQLLALPNSESVTFDTGDFYELLHLINTGNTANPGSIRCSKIRALFAMRACRGSI 915
Query: 352 MIGRALSVGEMTGLVRNMGRIDQPW 376
MIG+ LS M+ ++RN+G +D+PW
Sbjct: 916 MIGQHLSRKTMSNVIRNLGLLDKPW 940
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 1 MKLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVK 54
+K +NEVY +N+ QYP ++LNI + +DVNVTPDKR I + +E ++ +K
Sbjct: 297 LKTINEVYKSYNHVQYPVVVLNIIIDTKFLDVNVTPDKRTILIHNENIVHDVLK 350
>gi|255933019|ref|XP_002557980.1| Pc12g11630 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582599|emb|CAP80790.1| Pc12g11630 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 846
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 91/195 (46%), Positives = 128/195 (65%), Gaps = 12/195 (6%)
Query: 194 KEAESELNRVIKKSMFEKMKIVGQFNLGFII-VKYDSD---LFIIDQHATDEKYNFETLQ 249
K AE +L+ + K+ F +M+I+GQFNLGFII V+ D LFIIDQHA+DEK+NFE LQ
Sbjct: 604 KTAEDKLSLTVSKNDFAQMRIIGQFNLGFIIAVRPGEDHDELFIIDQHASDEKFNFERLQ 663
Query: 250 KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNV----LLTSLP 305
T++++Q+LV PQ L LT + + ++ +N KNGF + D S D + L SLP
Sbjct: 664 AETVVQNQRLVRPQRLDLTAVEEEVVLENRVALEKNGFLVTVDESGDEPIGRRCQLVSLP 723
Query: 306 MSKNTTLGREDIEELLFMLQHTNSTEH----CRPSRIRAMFASRACRKSVMIGRALSVGE 361
+SK G D+EEL+ +L + ST + RPS++R MFA RACR S+MIG+ L+ +
Sbjct: 724 LSKEVVFGVRDLEELIVLLSESISTSNELSVPRPSKVRKMFAMRACRSSIMIGKTLTSRQ 783
Query: 362 MTGLVRNMGRIDQPW 376
M +V+NMG ID+PW
Sbjct: 784 MERVVQNMGTIDKPW 798
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVK 54
K NEVY FN Q FI + +M + DVNV+PDKRQI + ++ ++K
Sbjct: 296 KAFNEVYKSFNVSQSAFIFADFQMDTGAYDVNVSPDKRQILLHDAGAMIESLK 348
>gi|170111216|ref|XP_001886812.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164638170|gb|EDR02449.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 269
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/203 (46%), Positives = 126/203 (62%), Gaps = 22/203 (10%)
Query: 196 AESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSD------------------LFIIDQH 237
A L RVI+K F M +VGQFNLGFII + D LFI+DQH
Sbjct: 32 AVDALARVIEKEDFASMDVVGQFNLGFIIARRRKDASPSPSRSISQELQVMDDLFIVDQH 91
Query: 238 ATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSD-- 295
A+DEKYNFETLQ TT I+SQKL PQ L LT ++ + +N+ V +NGFE D S+
Sbjct: 92 ASDEKYNFETLQLTTRIQSQKLFRPQPLELTAADELLATENIEVLRQNGFEIEVDDSECS 151
Query: 296 -DGNVL-LTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMI 353
G+ L L + P+SK+T G +D+EE++ +++ + + R S+ RAMFA RACRKSVMI
Sbjct: 152 GQGSRLKLVAQPISKSTVFGMKDLEEIIHLMRDRPTGQMVRCSKARAMFAMRACRKSVMI 211
Query: 354 GRALSVGEMTGLVRNMGRIDQPW 376
G L+ +M ++R+MG IDQPW
Sbjct: 212 GMPLNSHQMLTVLRHMGTIDQPW 234
>gi|255718257|ref|XP_002555409.1| KLTH0G08624p [Lachancea thermotolerans]
gi|238936793|emb|CAR24972.1| KLTH0G08624p [Lachancea thermotolerans CBS 6340]
Length = 906
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 90/191 (47%), Positives = 124/191 (64%), Gaps = 8/191 (4%)
Query: 194 KEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDS----DLFIIDQHATDEKYNFETLQ 249
+E E L + KS F+KM+IVGQFNLGFI+V DLFIIDQHA+DEKYNFE LQ
Sbjct: 689 EEGERYLTLSVSKSDFKKMEIVGQFNLGFILVTRRKSGKFDLFIIDQHASDEKYNFEKLQ 748
Query: 250 KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSS--DDGNVLLTSLPMS 307
K T+ KSQKL+ PQ + ++ I++ ++ DNL VF KNGF+ D V + SLP+S
Sbjct: 749 KNTVFKSQKLLAPQIVEMSIIDELVMMDNLEVFEKNGFKLEIDEEQPQGCRVKVVSLPVS 808
Query: 308 KNTTLGREDIEELLFMLQHTN--STEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGL 365
+ T D+ EL+ +++ ++ S + R S+IRAM A RACR S+M+GR L M +
Sbjct: 809 RKTLFDMNDLHELIHLVKESDGLSKDSIRCSKIRAMHAMRACRSSIMVGRPLVKKSMLRV 868
Query: 366 VRNMGRIDQPW 376
VRN+ +D+PW
Sbjct: 869 VRNLSELDKPW 879
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 37/61 (60%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K NEVY NN QYP +LN E+S + +DVNVTPDKR + + E ++ + + D Y
Sbjct: 298 KSCNEVYRTHNNVQYPVFVLNFELSPEFIDVNVTPDKRTVLLHAESSVIDAFREALADYY 357
Query: 62 A 62
+
Sbjct: 358 S 358
>gi|392588692|gb|EIW78024.1| hypothetical protein CONPUDRAFT_61519 [Coniophora puteana
RWD-64-598 SS2]
Length = 326
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 91/224 (40%), Positives = 134/224 (59%), Gaps = 33/224 (14%)
Query: 186 ANIDPS-KNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDS--------------- 229
A +D S + +A + L+R+I+KS F +M+I+GQFNLGFI+ + +
Sbjct: 60 AGLDKSVDDAKASATLSRIIRKSDFGEMEILGQFNLGFIVARRRALASDALPGGDVDGGG 119
Query: 230 -------------DLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILK 276
DLFI+DQHA DEKYNFETLQ+TT I+SQKL PQ L LT ++ +
Sbjct: 120 GDPASAASAGSLDDLFIVDQHAADEKYNFETLQQTTNIQSQKLFRPQPLELTAADELLAM 179
Query: 277 DNLPVFYKNGFEFSF----DSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEH 332
+N+ V +NGFE +++ + L + P+SK+T D+EE++ ++Q
Sbjct: 180 ENIDVLRQNGFEVDHIEDPEAASGSRLCLVAQPVSKSTVFDMRDLEEIIHLMQDRPKGTM 239
Query: 333 CRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
R S+ RAMFA RACRKS+M+G+ L+ +MT +VR+MG +DQPW
Sbjct: 240 VRCSKARAMFAMRACRKSIMVGKPLTQAQMTTVVRHMGTMDQPW 283
>gi|393214035|gb|EJC99529.1| hypothetical protein FOMMEDRAFT_38738, partial [Fomitiporia
mediterranea MF3/22]
Length = 242
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 96/211 (45%), Positives = 126/211 (59%), Gaps = 30/211 (14%)
Query: 196 AESELNRVIKKSMFEKMKIVGQFNLGFIIVK-------------------YDS------- 229
AE EL RVI K F M+I+GQFNLGFII + DS
Sbjct: 12 AERELARVIDKEDFSSMEIIGQFNLGFIIARRRLRGKKPSVQSSDDSQTGLDSSANAELD 71
Query: 230 DLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEF 289
DLFIIDQHA DEKYNFETLQ+TT I SQ+L P+ L LT ++ + +N+ + NGFE
Sbjct: 72 DLFIIDQHAADEKYNFETLQQTTRIDSQRLYKPRPLELTAADELLALENIDILKSNGFEV 131
Query: 290 SFDSSDD---GNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEH-CRPSRIRAMFASR 345
+ D + G + L + P+S +T +D+EELL ++Q + + R S+ RAMFA R
Sbjct: 132 TVDEDAEPSQGRIKLVAQPVSGSTNFDMKDLEELLHLMQDKPAGQKMVRCSKARAMFAMR 191
Query: 346 ACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
ACRKSVMIG AL+ +M +VR+MG +DQPW
Sbjct: 192 ACRKSVMIGMALNNSQMVSIVRHMGTMDQPW 222
>gi|426192804|gb|EKV42739.1| hypothetical protein AGABI2DRAFT_122323 [Agaricus bisporus var.
bisporus H97]
Length = 1016
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 96/204 (47%), Positives = 134/204 (65%), Gaps = 13/204 (6%)
Query: 186 ANIDPSKNKEAESE-LNRVIKKSMFEKMKIVGQFNLGFIIV---KYDS-------DLFII 234
A + + N++ +E L+R+I KS F +M++VGQFN GFII K DS DLFI+
Sbjct: 779 AGLSNTNNEDKAAEVLSRIIDKSDFSEMELVGQFNHGFIITRRRKLDSSSSGVMDDLFIV 838
Query: 235 DQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSS 294
DQHA DEKYNFETLQ+TT I+SQ L + L LT + + +N+ + KNGFE + +
Sbjct: 839 DQHAADEKYNFETLQQTTNIQSQTLFRSRPLELTASEELVATENIDILRKNGFEVDVNET 898
Query: 295 D-DGN-VLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVM 352
GN ++LT+ P+SK+T +D+EEL+ ++Q + R S+ RAMFA RACRKSVM
Sbjct: 899 ALPGNRLILTAQPVSKSTVFDAKDLEELINLMQDRPNGSMVRCSKARAMFAMRACRKSVM 958
Query: 353 IGRALSVGEMTGLVRNMGRIDQPW 376
IG +L+ +M +VR+MG IDQPW
Sbjct: 959 IGTSLNRHQMLNIVRHMGTIDQPW 982
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 33/53 (62%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVK 54
K NEVY FN +Q FI+ + + + DVNV+PDKR IF+ E L+A +K
Sbjct: 309 KAFNEVYRSFNPNQSAFIVADFVIPTAACDVNVSPDKRTIFLHSESNLIAALK 361
>gi|408391257|gb|EKJ70637.1| hypothetical protein FPSE_09147 [Fusarium pseudograminearum CS3096]
Length = 1006
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 96/226 (42%), Positives = 135/226 (59%), Gaps = 28/226 (12%)
Query: 171 RTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDS- 229
R +QA + V + AN AE +L+ I + F +M+I GQFN+GFII +
Sbjct: 747 RDIQAGEDEVTDLAAAN--------AEDKLSLAIARKDFLRMRIAGQFNMGFIIASRPAS 798
Query: 230 -------------DLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILK 276
+LFIIDQHATDEKYNFE LQ+ ++SQ+LV P+ L LT + + I+
Sbjct: 799 MRSGEELEAADNDELFIIDQHATDEKYNFERLQEVQTVQSQRLVHPKRLELTALEEEIIL 858
Query: 277 DNLPVFYKNGFEFSFDSSDDGNVL----LTSLPMSKNTTLGREDIEELLFML-QHTNSTE 331
N+P NGF+ D S D V + +LPMS+ T D EEL+ +L + ++ ++
Sbjct: 859 QNIPAIEANGFKVHVDMSGDEPVGSRCEVLALPMSREVTFSLADFEELIALLGEESSESK 918
Query: 332 HC-RPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
H RPS++R MFASRACR SVMIG+AL+ G+M LVR+M +D+PW
Sbjct: 919 HIPRPSKVRKMFASRACRSSVMIGKALTHGQMETLVRHMAELDKPW 964
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K NEVY +NN Q PFI+ +I++ DVNV+PDKR I + + LL ++ +TD +
Sbjct: 297 KAFNEVYKSYNNTQTPFILADIQLDTHMYDVNVSPDKRSILLHDQNQLLDNLRTALTDLF 356
>gi|46110094|ref|XP_382105.1| hypothetical protein FG01929.1 [Gibberella zeae PH-1]
Length = 1003
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 96/226 (42%), Positives = 135/226 (59%), Gaps = 28/226 (12%)
Query: 171 RTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDS- 229
R +QA + V + AN AE +L+ I + F +M+I GQFN+GFII +
Sbjct: 744 RDIQAGEDEVADLAAAN--------AEDKLSLTIARKDFLRMRIAGQFNMGFIIASRPAS 795
Query: 230 -------------DLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILK 276
+LFIIDQHATDEKYNFE LQ+ ++SQ+LV P+ L LT + + I+
Sbjct: 796 MRSGEELEAADNDELFIIDQHATDEKYNFERLQEVQTVQSQRLVHPKRLELTALEEEIIL 855
Query: 277 DNLPVFYKNGFEFSFDSSDDGNVL----LTSLPMSKNTTLGREDIEELLFML-QHTNSTE 331
N+P NGF+ D S D V + +LPMS+ T D EEL+ +L + ++ ++
Sbjct: 856 QNIPAIEANGFKVHVDMSGDEPVGSRCEVLALPMSREVTFSLADFEELIALLGEESSESK 915
Query: 332 HC-RPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
H RPS++R MFASRACR SVMIG+AL+ G+M LVR+M +D+PW
Sbjct: 916 HIPRPSKVRKMFASRACRSSVMIGKALTHGQMETLVRHMAELDKPW 961
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K NEVY +NN Q PFI+ +I++ DVNV+PDKR I + + LL ++ +TD +
Sbjct: 297 KAFNEVYKSYNNTQTPFILADIQLDTHMYDVNVSPDKRSILLHDQNQLLDNLRAALTDLF 356
>gi|346975429|gb|EGY18881.1| DNA mismatch repair protein PMS1 [Verticillium dahliae VdLs.17]
Length = 1035
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 90/201 (44%), Positives = 124/201 (61%), Gaps = 20/201 (9%)
Query: 196 AESELNRVIKKSMFEKMKIVGQFNLGFIIV-------------KYDSDLFIIDQHATDEK 242
AE +L+ +I KS F+ M +VGQFNLGFI+ K LFIIDQHA+DEK
Sbjct: 788 AEDKLSLIISKSDFDDMAVVGQFNLGFILAVRHASGSANGEHEKSHDSLFIIDQHASDEK 847
Query: 243 YNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVL-- 300
YNFE LQ T ++SQ LV P+ L LT + + I+++N+ NGF+ D S V
Sbjct: 848 YNFERLQSCTTVQSQHLVQPKQLELTALEEEIVRENISALEVNGFKVRIDDSGSQPVGLR 907
Query: 301 --LTSLPMSKNTTLGREDIEELLFMLQH---TNSTEHCRPSRIRAMFASRACRKSVMIGR 355
L +LP+S+ TT D+EEL+ +L T ++ RPSR+R MFA RACR S+M+G+
Sbjct: 908 CELVALPLSRETTFTLADLEELISLLGDHDLTGTSPAPRPSRVRKMFAMRACRSSIMVGK 967
Query: 356 ALSVGEMTGLVRNMGRIDQPW 376
AL+ +M LVR+MG +D+PW
Sbjct: 968 ALTHRQMERLVRHMGELDKPW 988
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 37/57 (64%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHIT 58
K+ N+VY +N+ Q PFI+ +I++ DVNV+PDKR I M + +L +++ +T
Sbjct: 296 KVFNDVYRSYNSSQSPFILADIQLDTHLYDVNVSPDKRTILMHEQNRMLESLREALT 352
>gi|389634121|ref|XP_003714713.1| hypothetical protein MGG_15760 [Magnaporthe oryzae 70-15]
gi|351647046|gb|EHA54906.1| hypothetical protein MGG_15760 [Magnaporthe oryzae 70-15]
Length = 1107
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 95/209 (45%), Positives = 126/209 (60%), Gaps = 28/209 (13%)
Query: 196 AESELNRVIKKSMFEKMKIVGQFNLGFIIVK---------------------YDSDLFII 234
AE +L+ I KS F +MKI+GQFNLGFII D +LFII
Sbjct: 853 AEQKLSLTITKSDFAQMKIIGQFNLGFIIAVREATTKGARDVVPSNRTGGGFTDDELFII 912
Query: 235 DQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSS 294
DQHA+DEKYNFE LQ +T+++SQ+LV P+ L LT + + I+ +N NGF D S
Sbjct: 913 DQHASDEKYNFERLQASTVVESQRLVRPKPLELTALEEEIIIENQKALETNGFIVDVDES 972
Query: 295 DDGNV----LLTSLPMSKNTTLGREDIEELLFMLQH---TNSTEHCRPSRIRAMFASRAC 347
+ V L SLP+S+ TT D+EEL+ +L T +T RPSR+R MFA RAC
Sbjct: 973 GESPVGSRCRLLSLPLSRETTFSLTDLEELVSLLADNPTTTATTVPRPSRVRKMFAMRAC 1032
Query: 348 RKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
R SVM+GRALS +M +VR+MG +++PW
Sbjct: 1033 RSSVMVGRALSQPQMEKVVRHMGGMEKPW 1061
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLL 50
K+ NEVY +N+ Q PFI +I++ DVNV+PDKR I + + +L
Sbjct: 303 KVFNEVYKTYNSTQSPFIFADIQLDTHLYDVNVSPDKRSILLHDQGRML 351
>gi|440471464|gb|ELQ40472.1| DNA mismatch repair protein pms1 [Magnaporthe oryzae Y34]
gi|440484713|gb|ELQ64744.1| DNA mismatch repair protein pms1 [Magnaporthe oryzae P131]
Length = 1111
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 95/209 (45%), Positives = 126/209 (60%), Gaps = 28/209 (13%)
Query: 196 AESELNRVIKKSMFEKMKIVGQFNLGFIIVK---------------------YDSDLFII 234
AE +L+ I KS F +MKI+GQFNLGFII D +LFII
Sbjct: 852 AEQKLSLTITKSDFAQMKIIGQFNLGFIIAVREATTKGARDVVPSNRTGGGFTDDELFII 911
Query: 235 DQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSS 294
DQHA+DEKYNFE LQ +T+++SQ+LV P+ L LT + + I+ +N NGF D S
Sbjct: 912 DQHASDEKYNFERLQASTVVESQRLVRPKPLELTALEEEIIIENQKALETNGFIVDVDES 971
Query: 295 DDGNV----LLTSLPMSKNTTLGREDIEELLFMLQH---TNSTEHCRPSRIRAMFASRAC 347
+ V L SLP+S+ TT D+EEL+ +L T +T RPSR+R MFA RAC
Sbjct: 972 GESPVGSRCRLLSLPLSRETTFSLTDLEELVSLLADNPTTTATTVPRPSRVRKMFAMRAC 1031
Query: 348 RKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
R SVM+GRALS +M +VR+MG +++PW
Sbjct: 1032 RSSVMVGRALSQPQMEKVVRHMGGMEKPW 1060
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLL 50
K+ NEVY +N+ Q PFI +I++ DVNV+PDKR I + + +L
Sbjct: 302 KVFNEVYKTYNSTQSPFIFADIQLDTHLYDVNVSPDKRSILLHDQGRML 350
>gi|402082930|gb|EJT77948.1| hypothetical protein GGTG_03051 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 1115
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 92/205 (44%), Positives = 124/205 (60%), Gaps = 24/205 (11%)
Query: 196 AESELNRVIKKSMFEKMKIVGQFNLGFIIVKY-----------------DSDLFIIDQHA 238
AE++L+ I K F KM+IVGQFNLGFI+ D +LFIIDQHA
Sbjct: 866 AEAKLSLTITKDDFAKMRIVGQFNLGFILAVREAAEKETAAVSAEGRVGDDELFIIDQHA 925
Query: 239 TDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGN 298
+DEKYNFE LQ T+++SQ+LV P+ L L + + I+ +N NGF D S
Sbjct: 926 SDEKYNFERLQANTVVQSQRLVRPKQLELAALEEEIIIENQAALEANGFVVEADQSGRSP 985
Query: 299 V----LLTSLPMSKNTTLGREDIEELLFMLQ---HTNSTEHCRPSRIRAMFASRACRKSV 351
V L SLP+S+ TT D+EEL+ +L + +T RPSR+R+MFA RACR SV
Sbjct: 986 VGSRCRLLSLPLSRETTFSLADLEELVSLLADNPSSGATTVPRPSRVRSMFAMRACRSSV 1045
Query: 352 MIGRALSVGEMTGLVRNMGRIDQPW 376
M+GRALS +M +VR+MG +++PW
Sbjct: 1046 MVGRALSRAQMEKVVRHMGEMEKPW 1070
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLL 50
K+ NEVY +N+ Q PFI +I++ DVNV+PDKR I + + +L
Sbjct: 305 KVFNEVYKAYNSTQSPFIFADIQLDTHLYDVNVSPDKRTILLHDQGRML 353
>gi|298710162|emb|CBJ31872.1| postmeiotic segregation increased 2 [Ectocarpus siliculosus]
Length = 907
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 88/189 (46%), Positives = 119/189 (62%), Gaps = 7/189 (3%)
Query: 193 NKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTT 252
++ A +RV+ K F +M++VGQFNLGF+I SDLFI+DQHA DEKYNFE LQ+TT
Sbjct: 690 SQAAARAFSRVLHKEHFTQMRVVGQFNLGFMICLLGSDLFILDQHACDEKYNFEVLQQTT 749
Query: 253 LIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDD----GNVLLTSLPMSK 308
I Q LV P L + + + DN+ +F +NGF F+ D DD + +T++P SK
Sbjct: 750 TIHQQPLVRPLPLETSASEEMTIIDNIALFERNGFRFTID--DDQPTTKKLKITAIPFSK 807
Query: 309 NTTLGREDIEELLFMLQ-HTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVR 367
T G +D+ EL ++ +TN E R + RAMFASRACR S MIG+AL G+M +V
Sbjct: 808 GTQFGVDDVHELASIVADNTNPGEMVRLPKARAMFASRACRSSFMIGKALDKGQMARVVA 867
Query: 368 NMGRIDQPW 376
M I+QPW
Sbjct: 868 KMATIEQPW 876
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHI 57
+ V+EV+ + Q P IL++ + + DVNVTPDKR+IFM E +L +K +
Sbjct: 318 RAVSEVWRAYEMKQKPAFILDLRLPPGTFDVNVTPDKREIFMTGEAEVLDCLKTAL 373
>gi|406701099|gb|EKD04253.1| postmeiotic segregation increased 2 [Trichosporon asahii var.
asahii CBS 8904]
Length = 950
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 107/271 (39%), Positives = 153/271 (56%), Gaps = 29/271 (10%)
Query: 129 TPDETIEVIDDMPRLQGSYRQSTPVTL-----SLDIIQDQLKARYARRTVQAQDRC-VEN 182
P+E V D P G YR TL +L +Q++ R+A ++ Q + V
Sbjct: 653 APEEREAVHVDEP--TGGYRDEITSTLPASEATLRFDMEQVRRRWASLSLSPQPKTDVAT 710
Query: 183 RFH-------ANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDS------ 229
+ A + AE+ L+R I K+ F +M+I+GQFN GFII S
Sbjct: 711 KLKKGQATSAAGVQNRDLASAEAALSRSIDKADFARMRILGQFNRGFIIAALPSSTEGEE 770
Query: 230 DLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEF 289
DL+IIDQHA+DEKYNFETLQ+T I++Q L+ P+ L L+ ++ L ++ V +NGFE
Sbjct: 771 DLYIIDQHASDEKYNFETLQRTHRIQAQALLAPKVLQLSAGDEITLLEHQDVVERNGFEL 830
Query: 290 SFDSSDDG----NVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASR 345
+D DG V L ++P+S++T D+ EL+ + + ++ R S+ RAMFA R
Sbjct: 831 KYDP--DGVPGRRVKLCAVPVSRDTVFDESDLAELIHRI--NDGHDNPRTSKARAMFAMR 886
Query: 346 ACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
ACR+SVMIG AL+ +M LVRNMG IDQPW
Sbjct: 887 ACRRSVMIGTALAKPKMEQLVRNMGTIDQPW 917
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 67/145 (46%), Gaps = 16/145 (11%)
Query: 1 MKLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
MK VNEVY +N Q P +L+ + +SVD+NV+PDKR +F+ E+ L+A ++ +
Sbjct: 252 MKAVNEVYKAYNISQVPLAVLDFRLPPESVDINVSPDKRTVFVHSERNLIAALREALDQF 311
Query: 61 YA---IGFTVDGNNMNQSM--EQDPSSDVDMEKIQRSNSEEVEH-----------ETIPV 104
YA F V G + M Q P D + ++ SE+ + E
Sbjct: 312 YAPTRSNFAVGGASQIHRMLASQKPVIDDEAKEDNEEGSEDGDAGGGEDEECGEEEGGEE 371
Query: 105 PSEDNSNFSHEANLQQSPETVEPDT 129
PS + + E Q +P PDT
Sbjct: 372 PSRNGAGSEEEDEPQPAPRKRRPDT 396
>gi|403160359|ref|XP_003890601.1| hypothetical protein, variant [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375169524|gb|EHS63906.1| hypothetical protein, variant [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1018
Score = 171 bits (432), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 88/191 (46%), Positives = 120/191 (62%), Gaps = 8/191 (4%)
Query: 195 EAESELNRVIKKSMFEKMKIVGQFNLGFIIVK------YDSDLFIIDQHATDEKYNFETL 248
EAE+ L+R ++K+ FE M+I+GQFNLGFIIV+ DLFI+DQHA+DEK+NFE L
Sbjct: 791 EAETTLSRNVQKADFEHMEIIGQFNLGFIIVRRIDEKHSTDDLFIVDQHASDEKFNFEKL 850
Query: 249 QKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSD--DGNVLLTSLPM 306
Q+ T + Q+L++P+ L LT + + DNL + NGF D S V L + P+
Sbjct: 851 QRETKLTGQRLLIPKMLDLTAAEEITVMDNLDILELNGFSVQVDESAKVGERVKLLAQPV 910
Query: 307 SKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLV 366
S NT+ D+ ELL ++ S E RPS+ R M ASRACR S MIG +L+V +M +V
Sbjct: 911 SGNTSWDVSDLGELLHLITERGSNEVVRPSKTRRMMASRACRMSTMIGDSLTVKQMARIV 970
Query: 367 RNMGRIDQPWV 377
MG +DQPW
Sbjct: 971 SQMGTMDQPWA 981
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 35/53 (66%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVK 54
K VNEVY QFN +QYP ++ N + DS D+N+ P+KR IF+ E L+ ++
Sbjct: 312 KCVNEVYKQFNTNQYPVLLANFILPSDSYDLNIDPNKRSIFLHSEGNLIEALR 364
>gi|342879996|gb|EGU81226.1| hypothetical protein FOXB_08259 [Fusarium oxysporum Fo5176]
Length = 1010
Score = 171 bits (432), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 124/345 (35%), Positives = 177/345 (51%), Gaps = 44/345 (12%)
Query: 64 GFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEAN--LQQS 121
G DG ++ S D ++D D + + + V IPV D E N +
Sbjct: 636 GEGSDGGEISDSEGTDTNTDSDTFNANK-DGKAVSEPAIPVAGSDRPGKQTETNDLSDIT 694
Query: 122 PETV--EPDTPDETIEVIDDMPRLQGSYRQ--------STPVTLSLDIIQDQLKARYARR 171
P T EP T D + + R + S Q + + L LD ++ L
Sbjct: 695 PFTFAGEPATTDHKTQSLKSSVRKKESTAQLLQHLRTDESLIKLGLDSWRNSLSPSQDST 754
Query: 172 TVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFII------- 224
TV D V + AN AE +L+ I + F KMKIVGQFN+GFII
Sbjct: 755 TV---DDEVTDLAAAN--------AEEKLSLTIARKDFLKMKIVGQFNMGFIIATRPAST 803
Query: 225 -------VKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKD 277
V ++LFIIDQHATDEK+NFE LQ+ ++SQ+LV P+ L LT + + I+
Sbjct: 804 GSEEDLEVAQKNELFIIDQHATDEKFNFERLQEIQTVQSQRLVHPKRLELTALEEEIVLQ 863
Query: 278 NLPVFYKNGFEFSFDSSDDGNVL----LTSLPMSKNTTLGREDIEELLFML-QHTNSTEH 332
N+ NGF+ D + D V + +LPMS+ T D+EEL+ +L + ++ ++H
Sbjct: 864 NISAIEANGFKVHVDMTGDEPVGSRCEVLALPMSREVTFSITDLEELIALLGEESSESKH 923
Query: 333 C-RPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
RPS++R MFASRACR SVMIG+AL+ G+M LVR+M +D+PW
Sbjct: 924 IPRPSKVRKMFASRACRSSVMIGKALTHGQMETLVRHMAELDKPW 968
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHIT 58
K NEVY +N+ Q PFI+ +I++ DVNV+PDKR I + + LL ++ +T
Sbjct: 297 KAFNEVYKAYNSSQAPFILADIQLDTHMYDVNVSPDKRSILLHDQNQLLDNLRTSLT 353
>gi|327355152|gb|EGE84009.1| DNA mismatch repair protein [Ajellomyces dermatitidis ATCC 18188]
Length = 1067
Score = 171 bits (432), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 93/226 (41%), Positives = 131/226 (57%), Gaps = 39/226 (17%)
Query: 189 DPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIV----------------KYDSDLF 232
+P + + AE++L+ + K F KM+I+GQFNLGFII K+D ++F
Sbjct: 786 EPGEPESAETQLSLSVSKEDFAKMRIIGQFNLGFIIATRPRGDSNNPSTLPGHKHD-EVF 844
Query: 233 IIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFD 292
IIDQHA+DEKYNFE LQ T++++Q+LV P+ L LT + + I+ DNLP KNGF D
Sbjct: 845 IIDQHASDEKYNFERLQAETVVQNQRLVKPKTLELTAVEEEIIIDNLPALEKNGFVVEVD 904
Query: 293 SSDDGNV----LLTSLPMSKNTTLGREDIEELLFMLQHTNSTEH---------------- 332
S + + LTSLP+SK D+EEL+ +L T +
Sbjct: 905 RSGNEPIGRRCKLTSLPLSKEVVFNTGDLEELIVLLGETPQIQTQSAPSPTSGSDVFAGK 964
Query: 333 --CRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
RPS++R MFA RACR S+MIG+ L+ +M +VR+MG ID+PW
Sbjct: 965 YIPRPSKVRKMFAMRACRSSIMIGKTLTTKQMDRVVRHMGMIDRPW 1010
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K NEVY FN Q PFI + +M +S DVNV+PDKR I + L+ ++K +T+ +
Sbjct: 297 KAFNEVYKSFNISQSPFIFADFKMDTNSYDVNVSPDKRTILLHDAGALIESLKTSLTELF 356
>gi|242819382|ref|XP_002487307.1| DNA mismatch repair protein (Pms1), putative [Talaromyces
stipitatus ATCC 10500]
gi|218713772|gb|EED13196.1| DNA mismatch repair protein (Pms1), putative [Talaromyces
stipitatus ATCC 10500]
Length = 1012
Score = 171 bits (432), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 97/244 (39%), Positives = 138/244 (56%), Gaps = 25/244 (10%)
Query: 156 SLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIV 215
SL IQ Q++A ++ +Q+ + + + + K E L+ + K F KM+IV
Sbjct: 705 SLTKIQTQMEA--LQKQLQSYEGFDATKEEEELFGKQQKTGEERLSLTVSKDDFAKMRIV 762
Query: 216 GQFNLGFIIVKYD-----------SDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQN 264
GQFNLGFI+ +LFIIDQHA+DEKYNFE LQ T++++Q+LV P+
Sbjct: 763 GQFNLGFILATRSHGVDEPTAPTQDELFIIDQHASDEKYNFERLQAETVVQNQRLVHPKT 822
Query: 265 LHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNV----LLTSLPMSKNTTLGREDIEEL 320
L LT + + I+++N KNGF D + D + L SLP+SK D+EEL
Sbjct: 823 LDLTAVEEEIIRENKAALEKNGFVIEVDDTGDEPIGRRCKLISLPLSKEVVFDVRDLEEL 882
Query: 321 LFMLQH--------TNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRI 372
+ +L T+ T RPS++R MFA RACR S+MIG+ L+V +M VRNMG I
Sbjct: 883 IVLLSEAPTARNSLTSDTYVPRPSKVRKMFAMRACRSSIMIGKTLTVKQMEKAVRNMGTI 942
Query: 373 DQPW 376
D+PW
Sbjct: 943 DKPW 946
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVK 54
K NEVY +N Q PF++ + +M ++ DVNV+PDKR I + L+ ++K
Sbjct: 301 KAFNEVYKTYNISQAPFVLADFQMDTNAYDVNVSPDKRTILLHESAALIESLK 353
>gi|239615471|gb|EEQ92458.1| DNA mismatch repair protein [Ajellomyces dermatitidis ER-3]
Length = 1065
Score = 170 bits (431), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 93/226 (41%), Positives = 131/226 (57%), Gaps = 39/226 (17%)
Query: 189 DPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIV----------------KYDSDLF 232
+P + + AE++L+ + K F KM+I+GQFNLGFII K+D ++F
Sbjct: 784 EPGEPESAETQLSLSVSKEDFAKMRIIGQFNLGFIIATRPRGDSNNPSTLPGHKHD-EVF 842
Query: 233 IIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFD 292
IIDQHA+DEKYNFE LQ T++++Q+LV P+ L LT + + I+ DNLP KNGF D
Sbjct: 843 IIDQHASDEKYNFERLQAETVVQNQRLVKPKTLELTAVEEEIIIDNLPALEKNGFVVEVD 902
Query: 293 SSDDGNV----LLTSLPMSKNTTLGREDIEELLFMLQHTNSTEH---------------- 332
S + + LTSLP+SK D+EEL+ +L T +
Sbjct: 903 RSGNEPIGRRCKLTSLPLSKEVVFNTGDLEELIVLLGETPQIQTQSAPSPTSGSDVFAGK 962
Query: 333 --CRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
RPS++R MFA RACR S+MIG+ L+ +M +VR+MG ID+PW
Sbjct: 963 YIPRPSKVRKMFAMRACRSSIMIGKTLTTKQMDRVVRHMGMIDRPW 1008
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K NEVY FN Q PFI + +M +S DVNV+PDKR I + L+ ++K +T+ +
Sbjct: 295 KAFNEVYKSFNISQSPFIFADFKMDTNSYDVNVSPDKRTILLHDAGALIESLKTSLTELF 354
>gi|384252763|gb|EIE26239.1| hypothetical protein COCSUDRAFT_83614, partial [Coccomyxa
subellipsoidea C-169]
Length = 181
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 81/168 (48%), Positives = 111/168 (66%), Gaps = 5/168 (2%)
Query: 209 FEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLT 268
F +M +VGQFNLGFI+ K DLFI+DQHA DEKYNFE LQ+ TL+ Q L+ PQ LHLT
Sbjct: 1 FARMDVVGQFNLGFILAKLGKDLFIVDQHAADEKYNFERLQQITLLNRQPLLRPQPLHLT 60
Query: 269 KINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTN 328
+LKD + +F+ NGF+F D D G + LT++P SK+T G +D++ELL ++ N
Sbjct: 61 PAEAILLKDKIDIFHTNGFDFKED--DQGQLHLTAVPFSKDTVFGIQDVQELLHLMISGN 118
Query: 329 STEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
S +RAM A RACR SVMIG+AL+ +M ++ + ++ PW
Sbjct: 119 SAAF---QMVRAMLAMRACRSSVMIGKALTASQMQTILSRLSALESPW 163
>gi|403160361|ref|XP_003320881.2| hypothetical protein PGTG_02903 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375169525|gb|EFP76462.2| hypothetical protein PGTG_02903 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1098
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 88/191 (46%), Positives = 120/191 (62%), Gaps = 8/191 (4%)
Query: 195 EAESELNRVIKKSMFEKMKIVGQFNLGFIIVK------YDSDLFIIDQHATDEKYNFETL 248
EAE+ L+R ++K+ FE M+I+GQFNLGFIIV+ DLFI+DQHA+DEK+NFE L
Sbjct: 871 EAETTLSRNVQKADFEHMEIIGQFNLGFIIVRRIDEKHSTDDLFIVDQHASDEKFNFEKL 930
Query: 249 QKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSD--DGNVLLTSLPM 306
Q+ T + Q+L++P+ L LT + + DNL + NGF D S V L + P+
Sbjct: 931 QRETKLTGQRLLIPKMLDLTAAEEITVMDNLDILELNGFSVQVDESAKVGERVKLLAQPV 990
Query: 307 SKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLV 366
S NT+ D+ ELL ++ S E RPS+ R M ASRACR S MIG +L+V +M +V
Sbjct: 991 SGNTSWDVSDLGELLHLITERGSNEVVRPSKTRRMMASRACRMSTMIGDSLTVKQMARIV 1050
Query: 367 RNMGRIDQPWV 377
MG +DQPW
Sbjct: 1051 SQMGTMDQPWA 1061
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 35/53 (66%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVK 54
K VNEVY QFN +QYP ++ N + DS D+N+ P+KR IF+ E L+ ++
Sbjct: 392 KCVNEVYKQFNTNQYPVLLANFILPSDSYDLNIDPNKRSIFLHSEGNLIEALR 444
>gi|388581303|gb|EIM21612.1| hypothetical protein WALSEDRAFT_38196 [Wallemia sebi CBS 633.66]
Length = 861
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 90/231 (38%), Positives = 147/231 (63%), Gaps = 18/231 (7%)
Query: 161 QDQLKARYARRTVQAQ----DRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVG 216
Q ++ R +RR+ Q + ++N N+D +++ AE+ L+RV+ K+ FE+++++G
Sbjct: 601 QINVEERQSRRSNTVQKTTPNNLLDNAGIQNVDDAQS--AENALSRVLHKNDFERLQVLG 658
Query: 217 QFNLGFIIVKY---------DSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHL 267
QFNLGF+IV+ + DLFI+DQHA DEKYNFE LQ I+SQKL++P+ L L
Sbjct: 659 QFNLGFMIVRRLETNTQGIEEEDLFIVDQHAADEKYNFENLQLNHKIQSQKLIIPRTLDL 718
Query: 268 TKINQCILKDNLPVFYKNGFEFSF--DSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQ 325
+ ++ ++ DNL + NGF+ D++ L SLP+SK+T +D+EEL+ +
Sbjct: 719 SASDELVVFDNLDILKSNGFDIQINEDATSGNRCQLVSLPLSKSTVFDLKDLEELIHFIN 778
Query: 326 HTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+ + R ++ R +FASRACR SVM+G++L + +MT +VRN+ ++QPW
Sbjct: 779 ES-PGKLVRCTKARDLFASRACRMSVMVGKSLKLKQMTKIVRNLSTLNQPW 828
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K +N+V+ +N YP +I + ++ D+ DVN+TPDKR IF+ E LL ++K + Y
Sbjct: 296 KAINQVFKSYNIQSYPLVIADFKVPMDTYDVNITPDKRTIFLHFESSLLESLKDRLDSFY 355
>gi|401881819|gb|EJT46101.1| hypothetical protein A1Q1_05312 [Trichosporon asahii var. asahii
CBS 2479]
Length = 986
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 109/272 (40%), Positives = 153/272 (56%), Gaps = 31/272 (11%)
Query: 129 TPDETIEVIDDMPRLQGSYRQSTPVTL-----SLDIIQDQLKARYARRTVQAQDRC-VEN 182
P+E V D P G YR TL +L +Q++ R+A ++ Q + V
Sbjct: 689 APEEREAVHVDDP--TGGYRDEITSTLPASEATLRFDMEQVRRRWASLSLSPQPKTDVAT 746
Query: 183 RFH-------ANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDS------ 229
+ A + AE+ L+R I K+ F +M+I+GQFN GFII S
Sbjct: 747 KLKKGQATSAAGVQNRDLASAEAALSRSIDKADFARMRILGQFNRGFIIAALPSSTEGEE 806
Query: 230 DLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEF 289
DL+IIDQHA+DEKYNFETLQ+T I++Q L+ P+ L L+ ++ L ++ V +NGFE
Sbjct: 807 DLYIIDQHASDEKYNFETLQRTHRIQAQALLAPKVLQLSAGDEITLLEHQDVVERNGFEL 866
Query: 290 SFDSSDDG----NVLLTSLPMSKNTTLGREDIEELLFMLQHTNST-EHCRPSRIRAMFAS 344
+D DG V L ++P+S++T D+ EL + H N ++ R S+ RAMFA
Sbjct: 867 KYDP--DGVPGRRVKLCAVPVSRDTVFDESDLAEL---IHHINDGHDNPRTSKARAMFAM 921
Query: 345 RACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
RACR+SVMIG AL+ +M LVRNMG IDQPW
Sbjct: 922 RACRRSVMIGTALAKPKMEQLVRNMGTIDQPW 953
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 1 MKLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
MK VNEVY +N Q P +L+ + +SVD+NV+PDKR +F+ E+ L+A ++ +
Sbjct: 290 MKAVNEVYKTYNISQVPLAVLDFRLPPESVDINVSPDKRTVFVHSERNLIAALREALDQF 349
Query: 61 YA---IGFTVDGNNMNQSM 76
YA F V G + +M
Sbjct: 350 YAPTRSNFAVGGASQIHTM 368
>gi|449541720|gb|EMD32702.1| hypothetical protein CERSUDRAFT_161174 [Ceriporiopsis subvermispora
B]
Length = 1089
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 93/211 (44%), Positives = 126/211 (59%), Gaps = 27/211 (12%)
Query: 193 NKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDS----------------------- 229
++ A L+RVI KS F M+++GQFNLGFI+ +
Sbjct: 841 DERAVEALSRVIDKSDFASMEVIGQFNLGFIVARRRKSVMDDCPRSADRGGNAANEPILD 900
Query: 230 DLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEF 289
DLFIIDQHA DEKYNFETLQ++T I+SQKL PQ L LT ++ + +N+ V +NGFE
Sbjct: 901 DLFIIDQHAADEKYNFETLQQSTKIESQKLFRPQALELTASDELLATENIDVLRQNGFEV 960
Query: 290 SFD---SSDDGNVL-LTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASR 345
D + G+ L L + P+SKNT +D+EELL ++ + R S+ RAMFA R
Sbjct: 961 EIDENAAPGQGSKLKLLAQPISKNTVFDMKDLEELLHLMHDRPTGHMVRCSKARAMFAMR 1020
Query: 346 ACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
ACRKS M+G L+ +MT +VR+MG +DQPW
Sbjct: 1021 ACRKSYMVGTPLNRHQMTSVVRHMGFMDQPW 1051
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K NEVY FN Q PF++ + + DS D+NV+PDKR I + E L+ +K + +++
Sbjct: 322 KAFNEVYRSFNATQAPFVVADFILPTDSCDINVSPDKRTILLHSEANLVQALKTALEETF 381
Query: 62 A 62
A
Sbjct: 382 A 382
>gi|295675041|ref|XP_002798066.1| DNA mismatch repair protein pms1 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226280716|gb|EEH36282.1| DNA mismatch repair protein pms1 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1067
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 91/219 (41%), Positives = 124/219 (56%), Gaps = 39/219 (17%)
Query: 197 ESELNRVIKKSMFEKMKIVGQFNLGFIIVKY---------------DSDLFIIDQHATDE 241
E+ L+ + K F KM+I+GQFNLGFII D +LFIIDQHA+DE
Sbjct: 792 ETRLSLSVSKEDFAKMRIIGQFNLGFIIATRFRGDPNDSTATIDHKDDELFIIDQHASDE 851
Query: 242 KYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNV-- 299
KYNFE LQ T++++Q+LV P+ L LT + + I+ DNLP KNGF D S D +
Sbjct: 852 KYNFERLQAETVVQNQRLVKPKTLDLTAVEEEIIIDNLPALEKNGFIVEVDRSGDEPIGR 911
Query: 300 --LLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHC--------------------RPSR 337
LTSLP+SK D+EEL+ +L + + RPS+
Sbjct: 912 RCKLTSLPLSKEVVFNIRDLEELIVLLGESPQAQSARSPSSFSTLSSSPLTSKYVPRPSK 971
Query: 338 IRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+R MFA RACR S+MIG++L+ +M +VR+MG ID+PW
Sbjct: 972 VRKMFAMRACRSSIMIGKSLTAKQMGKVVRHMGMIDKPW 1010
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K NEVY FN Q PFI + +M +S DVNV+PDKR I + L+ ++K +T+ +
Sbjct: 295 KAFNEVYKSFNISQSPFIFADFKMDTNSYDVNVSPDKRTILLHDAGTLIESLKTTLTELF 354
>gi|363753470|ref|XP_003646951.1| hypothetical protein Ecym_5379 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890587|gb|AET40134.1| hypothetical protein Ecym_5379 [Eremothecium cymbalariae
DBVPG#7215]
Length = 871
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 141/246 (57%), Gaps = 24/246 (9%)
Query: 145 GSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKNKEAESELNR-- 202
S+ T + SLD+++ +LK + R ++NKE E N
Sbjct: 609 SSHNLETSLDTSLDLLRKELKCSLSLLQTSIHTRSF----------TRNKEFEDSFNSEQ 658
Query: 203 ----VIKKSMFEKMKIVGQFNLGFIIVKYDS----DLFIIDQHATDEKYNFETLQKTTLI 254
+ K F KM IVGQFNLGFIIV + DLFI+DQHA+DEK+NFETLQKTT+
Sbjct: 659 FLTLTVSKDDFNKMSIVGQFNLGFIIVTRRTQNKHDLFIVDQHASDEKFNFETLQKTTIF 718
Query: 255 KSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSD--DGNVLLTSLPMSKNTTL 312
KSQ L+ PQ + + I++ ++ DNL +F +NGF+ + + ++ + + SLP SK
Sbjct: 719 KSQNLIKPQRIEMNVIDELLVLDNLELFRRNGFKINSNENNPPGSRIEVVSLPSSKQMVF 778
Query: 313 GREDIEELLFMLQHTNS--TEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMG 370
+D ELL +L+ N R S+IR+MFA RACR S+MIGR L+ MT ++RN+
Sbjct: 779 KMDDFYELLHLLKECNGINKSRIRCSKIRSMFAMRACRMSIMIGRPLNRRTMTKVIRNLN 838
Query: 371 RIDQPW 376
+++PW
Sbjct: 839 ELEKPW 844
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 35/54 (64%)
Query: 1 MKLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVK 54
+K N+ Y FN +YP +ILN ++ VDVNVTPDKR + + +E+ +L ++
Sbjct: 297 VKCCNDTYRTFNMLEYPVLILNFKLLPQLVDVNVTPDKRTVMLHNEEFVLQCLE 350
>gi|387219323|gb|AFJ69370.1| hypothetical protein NGATSA_3015800, partial [Nannochloropsis
gaditana CCMP526]
Length = 225
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 86/200 (43%), Positives = 126/200 (63%), Gaps = 14/200 (7%)
Query: 191 SKNKEAESEL-NRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQ 249
++ EA + + +RV+ KS +++ ++GQFNLGFII + +D+FI+DQHA DEKYNFETLQ
Sbjct: 6 GRDTEAAARVFSRVLTKSHLKRLVVLGQFNLGFIIARIGADVFILDQHACDEKYNFETLQ 65
Query: 250 KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFD--SSDDGNVLLTSLPMS 307
TT + Q+L+ P+ L L+ + + ++ ++LP F NGF F D + + L SLP S
Sbjct: 66 STTTLHEQRLIAPKPLELSAMEEVVILEHLPTFKANGFSFRLDPEAGPMERIKLLSLPYS 125
Query: 308 KNTTLGREDIEELLFMLQHTN-------STEHCRPS----RIRAMFASRACRKSVMIGRA 356
K G +DI EL +L ++ E PS +IRAMFASRACR S+MIG+A
Sbjct: 126 KGIQFGLQDIHELASLLGDSSFCGGVEEGAEGPAPSVRLPKIRAMFASRACRMSIMIGKA 185
Query: 357 LSVGEMTGLVRNMGRIDQPW 376
L+ +M +V N+ I+QPW
Sbjct: 186 LTRSQMQKVVANLAEIEQPW 205
>gi|212530184|ref|XP_002145249.1| DNA mismatch repair protein (Pms1), putative [Talaromyces marneffei
ATCC 18224]
gi|210074647|gb|EEA28734.1| DNA mismatch repair protein (Pms1), putative [Talaromyces marneffei
ATCC 18224]
Length = 1011
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/212 (43%), Positives = 125/212 (58%), Gaps = 29/212 (13%)
Query: 192 KNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIV-----------KYDSDLFIIDQHATD 240
+ K E L+ + K F KM+IVGQFNLGFI+ + +LFIIDQHA+D
Sbjct: 735 QQKTGEERLSLTVSKDDFAKMRIVGQFNLGFILAIRSHGADEPTASAEDELFIIDQHASD 794
Query: 241 EKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGN-- 298
EKYNFE LQ T++++Q+LV P+ L LT + + I+++N KNGF D D GN
Sbjct: 795 EKYNFERLQAETVVQNQRLVHPKTLDLTAVEEEIIRENKLALEKNGFVIEVD--DSGNEP 852
Query: 299 ----VLLTSLPMSKNTTLGREDIEELLFMLQH--TNSTEHC--------RPSRIRAMFAS 344
L SLP+SK D+EEL+ +L T++T + RPS++R MFA
Sbjct: 853 IGRRCKLVSLPLSKEVVFDIRDLEELIVLLSEAPTSATRNATTSDTYIPRPSKVRKMFAM 912
Query: 345 RACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
RACR S+MIG+ L+V +M VRNMG ID+PW
Sbjct: 913 RACRSSIMIGKTLTVKQMEKAVRNMGTIDKPW 944
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVK 54
K NEVY +N Q PF++ + +M ++ DVNV+PDKR I + L+ ++K
Sbjct: 291 KAFNEVYKTYNISQAPFVLADFQMDTNAYDVNVSPDKRTILLHDSAALIESLK 343
>gi|111380657|gb|ABH09705.1| MLH2-like protein [Talaromyces marneffei]
Length = 990
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/212 (43%), Positives = 125/212 (58%), Gaps = 29/212 (13%)
Query: 192 KNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIV-----------KYDSDLFIIDQHATD 240
+ K E L+ + K F KM+IVGQFNLGFI+ + +LFIIDQHA+D
Sbjct: 714 QQKTGEERLSLTVSKDDFAKMRIVGQFNLGFILAIRSHGADEPTASAEDELFIIDQHASD 773
Query: 241 EKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGN-- 298
EKYNFE LQ T++++Q+LV P+ L LT + + I+++N KNGF D D GN
Sbjct: 774 EKYNFERLQAETVVQNQRLVHPKTLDLTAVEEEIIRENKLALEKNGFVIEVD--DSGNEP 831
Query: 299 ----VLLTSLPMSKNTTLGREDIEELLFMLQH--TNSTEHC--------RPSRIRAMFAS 344
L SLP+SK D+EEL+ +L T++T + RPS++R MFA
Sbjct: 832 IGRRCKLVSLPLSKEVVFDIRDLEELIVLLSEAPTSATRNATTSDTYIPRPSKVRKMFAM 891
Query: 345 RACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
RACR S+MIG+ L+V +M VRNMG ID+PW
Sbjct: 892 RACRSSIMIGKTLTVKQMEKAVRNMGTIDKPW 923
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVK 54
K NEVY +N Q PF++ + +M ++ DVNV+PDKR I + L+ ++K
Sbjct: 270 KAFNEVYKTYNISQAPFVLADFQMDTNAYDVNVSPDKRTILLHDSAALIESLK 322
>gi|341892747|gb|EGT48682.1| CBN-PMS-2 protein [Caenorhabditis brenneri]
Length = 807
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 83/190 (43%), Positives = 120/190 (63%), Gaps = 2/190 (1%)
Query: 188 IDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFET 247
I +N +AE +L+R + K F MK++GQFN GFII + LFI+DQHA+DEKYNFE
Sbjct: 597 IRKEENSDAEKQLSRSLTKEDFNSMKVIGQFNNGFIICRLRGHLFIVDQHASDEKYNFER 656
Query: 248 LQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDG-NVLLTSLPM 306
LQ T + Q L P L + + +++DNLP+F NGF+F F D LT+ P
Sbjct: 657 LQNTAKLTKQPLFTPTALGFGSVQELVIRDNLPIFQANGFDFDFREKDGCLKTFLTARPE 716
Query: 307 SKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLV 366
+ L D+EE+L ++ + + RP RIR +FAS+ACRKSVMIG+ L+ EMT ++
Sbjct: 717 LLSQQLTNSDLEEILSVVSDYPNQMY-RPVRIRNIFASKACRKSVMIGKPLNQREMTRII 775
Query: 367 RNMGRIDQPW 376
R++ +++QPW
Sbjct: 776 RHLSKLEQPW 785
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 44/59 (74%)
Query: 3 LVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
++N+VY QFN +QYP I+L I++ + +DVNVTPDK+ + ++ E+ LLA ++ + ++Y
Sbjct: 304 VINDVYKQFNKNQYPIIVLFIDVPPEKIDVNVTPDKKTVMLEKERHLLAVIRASMMNTY 362
>gi|324502411|gb|ADY41063.1| Mismatch repair endonuclease PMS2 [Ascaris suum]
Length = 888
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 91/202 (45%), Positives = 126/202 (62%), Gaps = 10/202 (4%)
Query: 167 RYARRTVQAQDRCVENRFHANIDPS----KNKEAESELNRVIKKSMFEKMKIVGQFNLGF 222
R R +R +EN A + P+ + AE +L ++K F M +VGQFN GF
Sbjct: 650 RSRRSAALLSERAMEN---AVVQPTFTIVSQQAAEDDLGANVRKEDFAVMDVVGQFNKGF 706
Query: 223 IIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVF 282
II + DLFI+DQHA+DEKYNFE LQK I+SQ L+ P+ L + + + L+DN+ +F
Sbjct: 707 IITRLRGDLFIVDQHASDEKYNFERLQKEARIQSQLLINPRPLKIGAMEEAALRDNIEIF 766
Query: 283 YKNGFEFSFD--SSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRA 340
+NGFEF FD +G LLTS+P+ + LG DI+E+L +L T + RP+++R
Sbjct: 767 NQNGFEFRFDDNGESEGRALLTSVPVLNSCQLGTSDIDEMLSVLADFPGTMY-RPTKLRK 825
Query: 341 MFASRACRKSVMIGRALSVGEM 362
+FASRACRKSVMIG ALS +M
Sbjct: 826 LFASRACRKSVMIGMALSTPQM 847
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 40/60 (66%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
++ NEVY Q+N QY ++L +++ +S+DVNV PDKR +F + E+ L A V+ + ++
Sbjct: 300 RIANEVYQQYNQGQYCMLVLLVDVPPESIDVNVAPDKRSVFYEKERELFAVVRASLLATF 359
>gi|156843433|ref|XP_001644784.1| hypothetical protein Kpol_1020p35 [Vanderwaltozyma polyspora DSM
70294]
gi|156115434|gb|EDO16926.1| hypothetical protein Kpol_1020p35 [Vanderwaltozyma polyspora DSM
70294]
Length = 957
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 109/286 (38%), Positives = 161/286 (56%), Gaps = 32/286 (11%)
Query: 117 NLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVT----LSLDIIQDQLKARYARRT 172
++Q +PE + TP I +++ SYR T T L I++ L R
Sbjct: 651 DIQLAPEELNIRTP---ISYSWGGGKVKYSYRSLTDSTANSELDAPIVETSLDVEPLNRL 707
Query: 173 VQAQDRCVENRFHANIDPSKN------------KEAESELNRVIKKSMFEKMKIVGQFNL 220
++ + + N +N D S N +E E L + K F +M+IVGQFNL
Sbjct: 708 IE-ELSVIGNLITSNHDNSHNNEETRNYKIEDIEEGEKYLTLTVNKDDFNRMEIVGQFNL 766
Query: 221 GFIIV------KYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCI 274
GFII KYD LFIIDQHA+DEKYNFETLQK+T+ KSQKL+VPQ + L+ I++ +
Sbjct: 767 GFIIATRKVGDKYD--LFIIDQHASDEKYNFETLQKSTVFKSQKLIVPQPVELSVIDELL 824
Query: 275 LKDNLPVFYKNGFEFSFDSSD-DGN-VLLTSLPMSKNTTLGREDIEELLFMLQHTNS--T 330
+ +N+ +F KNGF+ D D GN + L SLP+SK T D ELL ++++
Sbjct: 825 VIENIGIFEKNGFKIEVDEDDTQGNKIKLVSLPVSKRTLFDINDFMELLHLIKNNVGIIK 884
Query: 331 EHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+ ++IR+MFA RACR S+MIG+ L+ M+ +V+++ + +PW
Sbjct: 885 SDIKCTKIRSMFAMRACRTSIMIGKPLTKKTMSKVVKHLSELHKPW 930
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K NE+Y Q+NN QYP ++ E+S + +D+N+TPDKR I +E+ ++ K + Y
Sbjct: 297 KCCNEIYRQYNNVQYPAFFIDFEISSELIDINITPDKRTILFHNERYVIDVFKEELIKYY 356
>gi|308503723|ref|XP_003114045.1| CRE-PMS-2 protein [Caenorhabditis remanei]
gi|308261430|gb|EFP05383.1| CRE-PMS-2 protein [Caenorhabditis remanei]
Length = 831
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 82/183 (44%), Positives = 117/183 (63%), Gaps = 2/183 (1%)
Query: 195 EAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLI 254
+AE +L+R + K F MK++GQFN GFII + LFI+DQHA+DEKYNFE LQ + +
Sbjct: 628 DAERQLSRSLTKEDFTNMKVIGQFNHGFIICRLRGHLFIVDQHASDEKYNFERLQNSAKL 687
Query: 255 KSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDG-NVLLTSLPMSKNTTLG 313
Q L P L + + I+++NLP+F NGF+F F +D LT+ P N L
Sbjct: 688 TKQPLFTPTALGFGSVQELIIRENLPIFQANGFDFEFRENDGCLKTFLTARPELLNQQLT 747
Query: 314 REDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRID 373
D+EE+L ++ + + RP RIR +FAS+ACRKSVMIG+ L EMT ++R++ ++D
Sbjct: 748 NSDLEEILAVVSDYPNQMY-RPVRIRNIFASKACRKSVMIGKPLDQREMTRIIRHLAKLD 806
Query: 374 QPW 376
QPW
Sbjct: 807 QPW 809
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 5/59 (8%)
Query: 3 LVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
++N+VY QFN QYP I+L I+ +DVNVTPDK+ + ++ E+ LLA ++ + +Y
Sbjct: 319 VINDVYKQFNKSQYPIIVLFID-----IDVNVTPDKKTVMLEKERHLLAVIRASMMKTY 372
>gi|365987962|ref|XP_003670812.1| hypothetical protein NDAI_0F02510 [Naumovozyma dairenensis CBS 421]
gi|343769583|emb|CCD25569.1| hypothetical protein NDAI_0F02510 [Naumovozyma dairenensis CBS 421]
Length = 787
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 89/190 (46%), Positives = 121/190 (63%), Gaps = 8/190 (4%)
Query: 195 EAESELNRVIKKSMFEKMKIVGQFNLGFIIVKY----DSDLFIIDQHATDEKYNFETLQK 250
E + L ++KK F+KMKIVGQFNLGFIIV D DLF+IDQHA DEKYNFE LQK
Sbjct: 571 EGDQYLTLMVKKEDFKKMKIVGQFNLGFIIVTRKIGNDYDLFVIDQHAADEKYNFERLQK 630
Query: 251 TTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFD--SSDDGNVLLTSLPMSK 308
T KSQ+L+VPQ + L+ I++ I+ DN F KNGF+ D +S + + +LP+SK
Sbjct: 631 ITTFKSQRLIVPQPVELSIIDELIVIDNHSTFEKNGFKLIIDKNASQGQKIKIVALPVSK 690
Query: 309 NTTLGREDIEELLFMLQHTNS--TEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLV 366
T + +D EL+ ++ TE R S+ R +FA RACR SVM+G+ L+ MT +V
Sbjct: 691 QTMINIDDFNELIHAIRENAGLNTEDLRCSKYRKLFAMRACRSSVMVGKPLTKKAMTTIV 750
Query: 367 RNMGRIDQPW 376
N+ + +PW
Sbjct: 751 HNLSDLKKPW 760
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 41/60 (68%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K N++Y QFNN Q+P I LN+ + +DVNVTPDKR +F+ +EK +L +K+ + + +
Sbjct: 298 KCCNDIYRQFNNAQFPSIFLNLVIPPQVIDVNVTPDKRIVFLQNEKYVLEELKIRLYEYF 357
>gi|294654739|ref|XP_002770025.1| DEHA2A10868p [Debaryomyces hansenii CBS767]
gi|199429111|emb|CAR65402.1| DEHA2A10868p [Debaryomyces hansenii CBS767]
Length = 959
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 98/239 (41%), Positives = 149/239 (62%), Gaps = 12/239 (5%)
Query: 146 SYRQSTPVTLSLDI--IQDQLKARYARRTVQAQDRCVENRFHANIDPSKNKEAESELNRV 203
SY + TL +D+ I +L+ A + ++Q+ N NI+ +K EAE +L+
Sbjct: 698 SYVHNLSTTLDVDLQHIYSELEKHEA--SGKSQEDSSRNIAIDNIESTK--EAEEKLSYT 753
Query: 204 IKKSMFEKMKIVGQFNLGFIIVKYDS--DLFIIDQHATDEKYNFETLQKTTLIKSQKLVV 261
I KS F +M+++GQFNLGFI+V +S +LFIIDQHA+DEKYNFE L + T ++Q LV+
Sbjct: 754 ISKSDFLEMRLIGQFNLGFILVTLNSSNNLFIIDQHASDEKYNFEKLTEITTFQNQTLVI 813
Query: 262 PQNLHLTKINQCILKDNLPVFYKNGF--EFSFDSSDDGNVLLTSLPMSKNTTLGREDIEE 319
P+ + L I++ I+ DNL VF +NGF + D+ + L SLP+SKN D E
Sbjct: 814 PKTIELNAIDEMIVMDNLSVFKQNGFVIQVEEDNPPGKRIKLISLPVSKNVLFDISDFHE 873
Query: 320 LLFMLQHTNST--EHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
L+ ++ NST E + S+IR++ A RACR S+MIG+ L+ MT ++ N+ ++D+PW
Sbjct: 874 LIHLINTHNSTSNEGIKCSKIRSLLAMRACRSSIMIGQHLNRKTMTKILTNLSKLDKPW 932
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
Query: 1 MKLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
+K +NEVY FN+ Q+P +ILN+ + + +D+NVTPDKR I + +E L+ ++ +T
Sbjct: 297 LKTINEVYKSFNHVQFPVVILNVIIDTEFLDINVTPDKRVIMIQNEDLINDILRNEVTKF 356
Query: 61 YAIGFTVDGNNMNQSME-QDPSSDVDMEKIQRSNSEEV 97
+ TV N + + D S V Q + EV
Sbjct: 357 FDTQNTVIPKNKSSGISLSDEKSSVSSNSTQANKVTEV 394
>gi|261199400|ref|XP_002626101.1| DNA mismatch repair protein Pms1 [Ajellomyces dermatitidis SLH14081]
gi|239594309|gb|EEQ76890.1| DNA mismatch repair protein Pms1 [Ajellomyces dermatitidis SLH14081]
Length = 1065
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 94/226 (41%), Positives = 131/226 (57%), Gaps = 39/226 (17%)
Query: 189 DPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIV----------------KYDSDLF 232
+P + + AE++L+ + K F KM+I+GQFNLGFII K+D ++F
Sbjct: 784 EPGELESAETQLSLSVSKEDFAKMRIIGQFNLGFIIATRPRGDSNNPSTLPGHKHD-EVF 842
Query: 233 IIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFD 292
IIDQHA+DEKYNFE LQ T++++Q+LV P+ L LT + + I+ DNLP KNGF D
Sbjct: 843 IIDQHASDEKYNFERLQAETVVQNQRLVKPKTLELTAVEEEIIIDNLPALEKNGFVVEVD 902
Query: 293 SSDDGNV----LLTSLPMSKNTTLGREDIEELLFMLQ-----HTNSTEH----------- 332
S + + LTSLP+SK D+EEL+ +L T S
Sbjct: 903 RSGNEPIGRRCKLTSLPLSKEVVFNTGDLEELIVLLGEAPQIQTQSAPSPTSGSDVFAGK 962
Query: 333 --CRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
RPS++R MFA RACR S+MIG+ L+ +M +VR+MG ID+PW
Sbjct: 963 YIPRPSKVRKMFAMRACRSSIMIGKTLTTKQMDRVVRHMGMIDRPW 1008
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K NEVY FN Q PFI + +M +S DVNV+PDKR I + L+ ++K +T+ +
Sbjct: 295 KAFNEVYKSFNISQSPFIFADFKMDTNSYDVNVSPDKRTILLHDAGALIESLKTSLTELF 354
>gi|119481545|ref|XP_001260801.1| DNA mismatch repair protein (Pms1), putative [Neosartorya fischeri
NRRL 181]
gi|119408955|gb|EAW18904.1| DNA mismatch repair protein (Pms1), putative [Neosartorya fischeri
NRRL 181]
Length = 1046
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 89/205 (43%), Positives = 122/205 (59%), Gaps = 26/205 (12%)
Query: 196 AESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSD---------LFIIDQHATDEKYNFE 246
AE L+ + K F +M+I+GQFNLGFI+ S+ LFIIDQHA+DEK+NFE
Sbjct: 772 AEERLSLTVTKDDFARMRIIGQFNLGFILATRSSEDGSADSKDELFIIDQHASDEKFNFE 831
Query: 247 TLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGN------VL 300
LQ T++++Q+LV P+ L LT + + I+ +N KNGF D D GN
Sbjct: 832 RLQAETVVQNQRLVQPKRLDLTAVEEEIVIENRTALEKNGFVVEVD--DSGNEPIGQRCK 889
Query: 301 LTSLPMSKNTTLGREDIEELLFMLQHTNSTEHC---------RPSRIRAMFASRACRKSV 351
L SLP+SK G D+EEL+ +L +T RPS++R MFA RACR S+
Sbjct: 890 LISLPLSKEVVFGVRDLEELIVLLSEMPATSSSGSAMQTHIPRPSKVRKMFAMRACRSSI 949
Query: 352 MIGRALSVGEMTGLVRNMGRIDQPW 376
MIG++L+ +M +VRNMG ID+PW
Sbjct: 950 MIGKSLTQTQMVRVVRNMGTIDKPW 974
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K NEVY FN Q PF+ + M ++ DVNV+PDKR I + L+ ++K +T+ +
Sbjct: 292 KAFNEVYKSFNVSQSPFVFADFHMDTNAYDVNVSPDKRTILLHDAGALIDSLKQSLTEMF 351
>gi|226286592|gb|EEH42105.1| DNA mismatch repair protein pms1 [Paracoccidioides brasiliensis Pb18]
Length = 1067
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 90/219 (41%), Positives = 123/219 (56%), Gaps = 39/219 (17%)
Query: 197 ESELNRVIKKSMFEKMKIVGQFNLGFIIVKY---------------DSDLFIIDQHATDE 241
E+ L+ + K F M+I+GQFNLGFII D +LFIIDQHA+DE
Sbjct: 792 ETRLSLSVSKEDFATMRIIGQFNLGFIIATRFRGDPDNSTATIDHKDDELFIIDQHASDE 851
Query: 242 KYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNV-- 299
KYNFE LQ T++++Q+LV P+ L LT + + I+ DNLP KNGF D S D +
Sbjct: 852 KYNFERLQAETVVQNQRLVKPKTLDLTAVEEEIIIDNLPALEKNGFIVEVDRSGDEPIGR 911
Query: 300 --LLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHC--------------------RPSR 337
LTSLP+SK D+EEL+ +L + + RPS+
Sbjct: 912 RCKLTSLPLSKEVVFNIRDLEELIVLLGESPQAQSAPSPSSFSTLSSSPLTSKYVPRPSK 971
Query: 338 IRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+R MFA RACR S+MIG++L+ +M +VR+MG ID+PW
Sbjct: 972 VRKMFAMRACRSSIMIGKSLTAKQMGKVVRHMGMIDKPW 1010
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K NEVY FN Q PFI + +M +S DVNV+PDKR I + L+ ++K +T+ +
Sbjct: 295 KAFNEVYKSFNISQSPFIFADFKMDTNSYDVNVSPDKRTILLHDAGTLIESLKTSLTELF 354
>gi|111380661|gb|ABH09707.1| PMS1-like protein [Talaromyces marneffei]
Length = 1403
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 92/212 (43%), Positives = 125/212 (58%), Gaps = 29/212 (13%)
Query: 192 KNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIV-----------KYDSDLFIIDQHATD 240
+ K E L+ + K F KM+IVGQFNLGFI+ + +LFIIDQHA+D
Sbjct: 1127 QQKTGEERLSLTVSKDDFAKMRIVGQFNLGFILAIRSHGADEPTASAEDELFIIDQHASD 1186
Query: 241 EKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGN-- 298
EKYNFE LQ T++++Q+LV P+ L LT + + I+++N KNGF D D GN
Sbjct: 1187 EKYNFERLQAETVVQNQRLVHPKTLDLTAVEEEIIRENKLALEKNGFVIEVD--DSGNEP 1244
Query: 299 ----VLLTSLPMSKNTTLGREDIEELLFMLQH--TNSTEHC--------RPSRIRAMFAS 344
L SLP+SK D+EEL+ +L T++T + RPS++R MFA
Sbjct: 1245 IGRRCKLVSLPLSKEVVFDIRDLEELIVLLSEAPTSATRNATTSDTYIPRPSKVRKMFAM 1304
Query: 345 RACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
RACR S+MIG+ L+V +M VRNMG ID+PW
Sbjct: 1305 RACRSSIMIGKTLTVKQMEKAVRNMGTIDKPW 1336
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVK 54
K NEVY +N Q PF++ + +M ++ DVNV+PDKR I + L+ ++K
Sbjct: 683 KAFNEVYKTYNISQAPFVLADFQMDTNAYDVNVSPDKRTILLHDSAALIESLK 735
>gi|350634345|gb|EHA22707.1| DNA mismatch repair protein [Aspergillus niger ATCC 1015]
Length = 1043
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 90/205 (43%), Positives = 122/205 (59%), Gaps = 24/205 (11%)
Query: 196 AESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDS------------DLFIIDQHATDEKY 243
AE L+ + K F M+IVGQFNLGFI+ S +LFIIDQHA+DEK+
Sbjct: 781 AEERLSLTVSKDDFANMRIVGQFNLGFILATRSSTDDSGPGSSAKDELFIIDQHASDEKF 840
Query: 244 NFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNV---- 299
NFE LQ T++++Q+LV P+ L LT + + I+ +N KNGF D S D +
Sbjct: 841 NFERLQAETVVQNQRLVQPKRLDLTAVEEEIVIENQAALEKNGFIVEVDESGDEPIGRRC 900
Query: 300 LLTSLPMSKNTTLGREDIEELLFMLQH--TNSTEHC------RPSRIRAMFASRACRKSV 351
L SLP+SK G D+EEL+ +L TN+ RPS++R MFA RACR S+
Sbjct: 901 KLVSLPLSKEVVFGVRDLEELIVLLSETPTNAARSATGMYIPRPSKVRKMFAMRACRSSI 960
Query: 352 MIGRALSVGEMTGLVRNMGRIDQPW 376
MIG+ L+V +M +V+NMG ID+PW
Sbjct: 961 MIGKTLTVKQMQKVVQNMGTIDKPW 985
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVK 54
K NEVY FN Q PF+ + M ++ DVNV+PDKR I + L+ ++K
Sbjct: 294 KAFNEVYKSFNVSQSPFVFADFHMDTNAYDVNVSPDKRTILLHDAGALIDSLK 346
>gi|317027466|ref|XP_001399369.2| DNA mismatch repair protein (Pms1) [Aspergillus niger CBS 513.88]
Length = 1055
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 90/205 (43%), Positives = 122/205 (59%), Gaps = 24/205 (11%)
Query: 196 AESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDS------------DLFIIDQHATDEKY 243
AE L+ + K F M+IVGQFNLGFI+ S +LFIIDQHA+DEK+
Sbjct: 793 AEERLSLTVSKDDFANMRIVGQFNLGFILATRSSTDDSGPGSSAKDELFIIDQHASDEKF 852
Query: 244 NFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNV---- 299
NFE LQ T++++Q+LV P+ L LT + + I+ +N KNGF D S D +
Sbjct: 853 NFERLQAETVVQNQRLVQPKRLDLTAVEEEIVIENQAALEKNGFIVEVDESGDEPIGRRC 912
Query: 300 LLTSLPMSKNTTLGREDIEELLFMLQH--TNSTEHC------RPSRIRAMFASRACRKSV 351
L SLP+SK G D+EEL+ +L TN+ RPS++R MFA RACR S+
Sbjct: 913 KLVSLPLSKEVVFGVRDLEELIVLLSETPTNAARSATGMYIPRPSKVRKMFAMRACRSSI 972
Query: 352 MIGRALSVGEMTGLVRNMGRIDQPW 376
MIG+ L+V +M +V+NMG ID+PW
Sbjct: 973 MIGKTLTVKQMQKVVQNMGTIDKPW 997
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVK 54
K NEVY FN Q PF+ + M ++ DVNV+PDKR I + L+ ++K
Sbjct: 296 KAFNEVYKSFNVSQSPFVFADFHMDTNAYDVNVSPDKRTILLHDAGALIDSLK 348
>gi|367002666|ref|XP_003686067.1| hypothetical protein TPHA_0F01490 [Tetrapisispora phaffii CBS 4417]
gi|357524367|emb|CCE63633.1| hypothetical protein TPHA_0F01490 [Tetrapisispora phaffii CBS 4417]
Length = 901
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 87/193 (45%), Positives = 128/193 (66%), Gaps = 12/193 (6%)
Query: 194 KEAESELNRVIKKSMFEKMKIVGQFNLGFII----VKYDSDLFIIDQHATDEKYNFETLQ 249
+E + L +KK F M +VGQFNLGFII + S+LFI+DQHA+DEKYNFETLQ
Sbjct: 684 EEGDRYLTLTVKKKQFNNMNLVGQFNLGFIITTCNIDGKSNLFIVDQHASDEKYNFETLQ 743
Query: 250 KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGN----VLLTSLP 305
K T+ KSQKL+ + L+ +++ ++ +N+ +F KNGF+ D DDGN + LTSLP
Sbjct: 744 KNTVFKSQKLISSLPVELSVVDELVVMENIEIFEKNGFKLEVD--DDGNQGCKIRLTSLP 801
Query: 306 MSKNTTLGREDIEELLFMLQHTN--STEHCRPSRIRAMFASRACRKSVMIGRALSVGEMT 363
+SK T ED EL+ +++ + + E + S+IR+MFA RACR S+MIG+ L+ M+
Sbjct: 802 VSKRTLFNIEDFNELVQLVKVNDGMNKESIKCSKIRSMFAMRACRSSIMIGKPLNRKVMS 861
Query: 364 GLVRNMGRIDQPW 376
+V+N+ +D+PW
Sbjct: 862 RVVKNLSTLDKPW 874
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 1 MKLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVK 54
+K NE Y QFNN QYP LN +S + +D+NVTPDKR + + +E+ ++ K
Sbjct: 296 VKSCNETYRQFNNVQYPAFFLNFIVSPELIDLNVTPDKRTVILHNERYVIDLFK 349
>gi|341892768|gb|EGT48703.1| hypothetical protein CAEBREN_10667 [Caenorhabditis brenneri]
Length = 247
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 83/190 (43%), Positives = 120/190 (63%), Gaps = 2/190 (1%)
Query: 188 IDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFET 247
I +N +AE +L+R + K F MK++GQFN GFII + LFI+DQHA+DEKYNFE
Sbjct: 37 IRKEENSDAEKQLSRSLTKEDFNSMKVIGQFNNGFIICRLRGHLFIVDQHASDEKYNFER 96
Query: 248 LQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDG-NVLLTSLPM 306
LQ T + Q L P L + + +++DNLP+F NGF+F F D LT+ P
Sbjct: 97 LQNTAKLTKQPLFTPAALGFGSVQELVIRDNLPIFQANGFDFDFREKDGCLKTFLTARPE 156
Query: 307 SKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLV 366
+ L D+EE+L ++ + + RP RIR +FAS+ACRKSVMIG+ L+ EMT ++
Sbjct: 157 LLSQQLTNSDLEEILSVVSDYPNQMY-RPVRIRNIFASKACRKSVMIGKPLNQREMTRII 215
Query: 367 RNMGRIDQPW 376
R++ +++QPW
Sbjct: 216 RHLSKLEQPW 225
>gi|328866647|gb|EGG15030.1| MutL DNA mismatch repair protein [Dictyostelium fasciculatum]
Length = 996
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 84/184 (45%), Positives = 123/184 (66%), Gaps = 2/184 (1%)
Query: 196 AESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIK 255
AE EL+ IKK F +M+++GQFN FII + D+DLFI+DQHA DEKYN+ETLQK+ +
Sbjct: 773 AEKELSLHIKKEDFLRMQVIGQFNNSFIIARLDTDLFIVDQHAADEKYNYETLQKSHELI 832
Query: 256 SQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSF--DSSDDGNVLLTSLPMSKNTTLG 313
SQ L+ P ++ LT ++ IL D+L +F KNGF F ++ V + SLP S+ T G
Sbjct: 833 SQPLIRPTHIQLTDEDEEILIDHLDLFKKNGFIFDVNRNAPPTKRVKIVSLPFSRKWTFG 892
Query: 314 REDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRID 373
DI EL+FM++ + + CR RI AMFASRAC+KS+++G L+ +M ++ N+ +++
Sbjct: 893 PNDIYELIFMIKESLPGQVCRLPRISAMFASRACKKSIVVGMPLTHEQMRKVLSNLSQLE 952
Query: 374 QPWV 377
PW
Sbjct: 953 NPWC 956
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 2 KLVNEVYHQFNNH-QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K VN +YH F YP + L+I+M+ ++ DVNVTPDKR++F+ E++LL + H+
Sbjct: 328 KTVNSMYHSFQKKGSYPVLFLDIKMNPNTYDVNVTPDKRKVFIQKEEILLTLIGDHLKSH 387
Query: 61 Y 61
+
Sbjct: 388 W 388
>gi|225684832|gb|EEH23116.1| DNA mismatch repair protein PMS1 [Paracoccidioides brasiliensis Pb03]
Length = 1105
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 90/219 (41%), Positives = 123/219 (56%), Gaps = 39/219 (17%)
Query: 197 ESELNRVIKKSMFEKMKIVGQFNLGFIIVKY---------------DSDLFIIDQHATDE 241
E+ L+ + K F M+I+GQFNLGFII D +LFIIDQHA+DE
Sbjct: 830 ETRLSLSVSKEDFATMRIIGQFNLGFIIATRFRGDPDNSTATIDHKDDELFIIDQHASDE 889
Query: 242 KYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNV-- 299
KYNFE LQ T++++Q+LV P+ L LT + + I+ DNLP KNGF D S D +
Sbjct: 890 KYNFERLQAETVVQNQRLVKPKTLDLTAVEEEIIIDNLPALEKNGFIVEVDRSGDEPIGR 949
Query: 300 --LLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHC--------------------RPSR 337
LTSLP+SK D+EEL+ +L + + RPS+
Sbjct: 950 RCKLTSLPLSKEVVFNIRDLEELIVLLGESPQAQSAPSPSSFSTLSSSPLTSKYVPRPSK 1009
Query: 338 IRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+R MFA RACR S+MIG++L+ +M +VR+MG ID+PW
Sbjct: 1010 VRKMFAMRACRSSIMIGKSLTAKQMGKVVRHMGMIDKPW 1048
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K NEVY FN Q PFI + +M +S DVNV+PDKR I + L+ ++K +T+ +
Sbjct: 333 KAFNEVYKSFNILQSPFIFADFKMDTNSYDVNVSPDKRTILLHDAGTLIESLKTSLTELF 392
>gi|358365802|dbj|GAA82424.1| DNA mismatch repair protein [Aspergillus kawachii IFO 4308]
Length = 1050
Score = 167 bits (423), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 90/210 (42%), Positives = 124/210 (59%), Gaps = 24/210 (11%)
Query: 191 SKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDS------------DLFIIDQHA 238
++ + AE L+ + K F M+IVGQFNLGFI+ S +LFIIDQHA
Sbjct: 784 AQQETAEERLSLTVSKEDFTNMRIVGQFNLGFILATRSSADDTGAGSSAKDELFIIDQHA 843
Query: 239 TDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGN 298
+DEK+NFE LQ T++++Q+LV P+ L LT + + I+ +N KNGF D S D
Sbjct: 844 SDEKFNFERLQAETVVQNQRLVQPKRLDLTAVEEEIVIENQAALEKNGFIVEVDESGDEP 903
Query: 299 V----LLTSLPMSKNTTLGREDIEELLFMLQH--TNSTEHC------RPSRIRAMFASRA 346
+ L SLP+SK G D+EEL+ +L TN+ RPS++R MFA RA
Sbjct: 904 IGRRCKLVSLPLSKEVVFGVRDLEELIVLLSETPTNAARSASGMYIPRPSKVRKMFAMRA 963
Query: 347 CRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
CR S+MIG+ L+V +M +V NMG ID+PW
Sbjct: 964 CRSSIMIGKTLTVKQMQKVVHNMGTIDKPW 993
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVK 54
K NEVY FN Q PF+ + M ++ DVNV+PDKR I + L+ ++K
Sbjct: 296 KAFNEVYKSFNVSQSPFVFADFHMDTNAYDVNVSPDKRTILLHDAGALIDSLK 348
>gi|225557600|gb|EEH05886.1| DNA mismatch repair protein pms1 [Ajellomyces capsulatus G186AR]
Length = 1515
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 92/228 (40%), Positives = 130/228 (57%), Gaps = 40/228 (17%)
Query: 189 DPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKY---------------DSDLFI 233
+P + AE+ L+ + K F +M+I+GQFNLGFIIV + ++FI
Sbjct: 1231 EPGEPGSAETRLSLSVSKEDFARMRIIGQFNLGFIIVTRPRGNPNDPRAFPSHKNDEVFI 1290
Query: 234 IDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDS 293
IDQHA+DEKYNFE LQ T++++Q+LV P+ L LT + + I+ DNLP KNGF D
Sbjct: 1291 IDQHASDEKYNFERLQAETVVQNQRLVKPKILTLTAVEEEIIIDNLPTLEKNGFVVEVDR 1350
Query: 294 SDDGNV----LLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHC---------------- 333
S D + LTSLP+SK +D+EEL+ +L + T+
Sbjct: 1351 SGDEPIGRRCKLTSLPLSKEMVFDTQDLEELIVLLGESPQTQSASSPSSSDSVLTPTTFG 1410
Query: 334 -----RPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
RPS++R MFA RACR S+MIG+ L+ +M +VR+MG ID+PW
Sbjct: 1411 SKYIPRPSKVRKMFAMRACRSSIMIGKTLTNKQMDCVVRHMGMIDKPW 1458
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 37/60 (61%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K NEVY FN Q PFI + +M +S DVNV+PDKR I + L+ ++KV +T+ +
Sbjct: 742 KAFNEVYKSFNISQSPFIFADFKMDTNSYDVNVSPDKRTILLHDAGALIESLKVSLTELF 801
>gi|303322639|ref|XP_003071311.1| DNA mismatch repair protein MutL family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240111013|gb|EER29166.1| DNA mismatch repair protein MutL family protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 1026
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 91/220 (41%), Positives = 129/220 (58%), Gaps = 39/220 (17%)
Query: 196 AESELNRVIKKSMFEKMKIVGQFNLGFIIV---KYDS----------DLFIIDQHATDEK 242
AE+ L+ + K F KM++VGQFNLGFI+ DS +LFIIDQHA+DEK
Sbjct: 742 AETRLSLTVSKEDFAKMRVVGQFNLGFILAIRPGTDSTDFQDNPTKDELFIIDQHASDEK 801
Query: 243 YNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNV--- 299
YNFE LQ T++++Q+LV P+ L LT + + ++ DN+P KNGF D+S D +
Sbjct: 802 YNFERLQAETVVQNQRLVRPKTLDLTAVEEEVIIDNIPTLEKNGFIVDIDTSGDEPIGRR 861
Query: 300 -LLTSLPMSKNTTLGREDIEELLFML----QHTNSTEH------------------CRPS 336
L SLP+SK D+EEL+ +L QH +++ RP
Sbjct: 862 CKLISLPLSKEVVFNTRDLEELIVLLSESPQHHRASQDDGDVDPASSSSQFTNLYVPRPG 921
Query: 337 RIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
++R MFA RACR S+MIG++L+V +M +VR+MG ID+PW
Sbjct: 922 KVRKMFAMRACRSSIMIGKSLTVKQMERVVRHMGMIDKPW 961
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHIT 58
+ NEVY FN Q PFI N EM+ ++ DVNV+PDKR I + L+ ++K +T
Sbjct: 297 RAFNEVYRSFNISQSPFIFANFEMNTNAYDVNVSPDKRTILLHDAGALIESLKASLT 353
>gi|134056274|emb|CAK96402.1| unnamed protein product [Aspergillus niger]
Length = 869
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 90/205 (43%), Positives = 122/205 (59%), Gaps = 24/205 (11%)
Query: 196 AESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDS------------DLFIIDQHATDEKY 243
AE L+ + K F M+IVGQFNLGFI+ S +LFIIDQHA+DEK+
Sbjct: 607 AEERLSLTVSKDDFANMRIVGQFNLGFILATRSSTDDSGPGSSAKDELFIIDQHASDEKF 666
Query: 244 NFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNV---- 299
NFE LQ T++++Q+LV P+ L LT + + I+ +N KNGF D S D +
Sbjct: 667 NFERLQAETVVQNQRLVQPKRLDLTAVEEEIVIENQAALEKNGFIVEVDESGDEPIGRRC 726
Query: 300 LLTSLPMSKNTTLGREDIEELLFMLQH--TNSTEHC------RPSRIRAMFASRACRKSV 351
L SLP+SK G D+EEL+ +L TN+ RPS++R MFA RACR S+
Sbjct: 727 KLVSLPLSKEVVFGVRDLEELIVLLSETPTNAARSATGMYIPRPSKVRKMFAMRACRSSI 786
Query: 352 MIGRALSVGEMTGLVRNMGRIDQPW 376
MIG+ L+V +M +V+NMG ID+PW
Sbjct: 787 MIGKTLTVKQMQKVVQNMGTIDKPW 811
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVK 54
K NEVY FN Q PF+ + M ++ DVNV+PDKR I + L+ ++K
Sbjct: 296 KAFNEVYKSFNVSQSPFVFADFHMDTNAYDVNVSPDKRTILLHDAGALIDSLK 348
>gi|240278280|gb|EER41787.1| DNA mismatch repair protein [Ajellomyces capsulatus H143]
Length = 1515
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 92/228 (40%), Positives = 130/228 (57%), Gaps = 40/228 (17%)
Query: 189 DPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKY---------------DSDLFI 233
+P + AE+ L+ + K F +M+I+GQFNLGFIIV + ++FI
Sbjct: 1231 EPGEPGSAETRLSLSVSKEDFARMRIIGQFNLGFIIVTRPRGNPNDSRAFPSHKNDEVFI 1290
Query: 234 IDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDS 293
IDQHA+DEKYNFE LQ T++++Q+LV P+ L LT + + I+ DNLP KNGF D
Sbjct: 1291 IDQHASDEKYNFERLQAETVVQNQRLVKPKILTLTAVEEEIIIDNLPTLEKNGFVVEVDR 1350
Query: 294 SDDGNV----LLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHC---------------- 333
S D + LTSLP+SK +D+EEL+ +L + T+
Sbjct: 1351 SGDEPIGRRCKLTSLPLSKEMVFDTQDLEELIVLLGESPQTQSASSPSSSDSVLTPTTFG 1410
Query: 334 -----RPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
RPS++R MFA RACR S+MIG+ L+ +M +VR+MG ID+PW
Sbjct: 1411 SKYIPRPSKVRKMFAMRACRSSIMIGKTLTNKQMDCVVRHMGMIDKPW 1458
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 37/60 (61%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K NEVY FN Q PFI + +M +S DVNV+PDKR I + L+ ++KV +T+ +
Sbjct: 742 KAFNEVYKSFNISQSPFIFADFKMDTNSYDVNVSPDKRTILLHDAGALIESLKVSLTELF 801
>gi|325096304|gb|EGC49614.1| DNA mismatch repair protein [Ajellomyces capsulatus H88]
Length = 1515
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 92/228 (40%), Positives = 130/228 (57%), Gaps = 40/228 (17%)
Query: 189 DPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKY---------------DSDLFI 233
+P + AE+ L+ + K F +M+I+GQFNLGFIIV + ++FI
Sbjct: 1231 EPGEPGSAETRLSLSVSKEDFARMRIIGQFNLGFIIVTRPRGNPNDSRAFPSHKNDEVFI 1290
Query: 234 IDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDS 293
IDQHA+DEKYNFE LQ T++++Q+LV P+ L LT + + I+ DNLP KNGF D
Sbjct: 1291 IDQHASDEKYNFERLQAETVVQNQRLVKPKILTLTAVEEEIIIDNLPTLEKNGFVVEVDR 1350
Query: 294 SDDGNV----LLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHC---------------- 333
S D + LTSLP+SK +D+EEL+ +L + T+
Sbjct: 1351 SGDEPIGRRCKLTSLPLSKEMVFDTQDLEELIVLLGESPQTQSASSPSSSDSVLTPTTFG 1410
Query: 334 -----RPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
RPS++R MFA RACR S+MIG+ L+ +M +VR+MG ID+PW
Sbjct: 1411 SKYIPRPSKVRKMFAMRACRSSIMIGKTLTNKQMDCVVRHMGMIDKPW 1458
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 37/60 (61%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K NEVY FN Q PFI + +M +S DVNV+PDKR I + L+ ++KV +T+ +
Sbjct: 742 KAFNEVYKSFNISQSPFIFADFKMDTNSYDVNVSPDKRTILLHDAGALIESLKVSLTELF 801
>gi|115384270|ref|XP_001208682.1| hypothetical protein ATEG_01317 [Aspergillus terreus NIH2624]
gi|114196374|gb|EAU38074.1| hypothetical protein ATEG_01317 [Aspergillus terreus NIH2624]
Length = 1049
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 88/207 (42%), Positives = 121/207 (58%), Gaps = 26/207 (12%)
Query: 196 AESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDS-------------DLFIIDQHATDEK 242
AE L+ + K F +M+I+GQFNLGFI+ S +LFIIDQHA+DEK
Sbjct: 779 AEERLSLTVSKDDFAQMRIIGQFNLGFILATRSSRDSSNSAISASKDELFIIDQHASDEK 838
Query: 243 YNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNV--- 299
+NFE LQ T++++Q+LV P+ L LT + + I+ +N KNGF D S D +
Sbjct: 839 FNFERLQAETVVQNQRLVQPKRLDLTAVEEEIVIENQAALEKNGFIVEVDDSGDEPIGRR 898
Query: 300 -LLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHC---------RPSRIRAMFASRACRK 349
L SLP+SK G D+EEL+ +L +T RPS++R MFA RACR
Sbjct: 899 CKLVSLPLSKEVVFGVRDLEELIVLLSEMPATGTTGGASDRYVPRPSKVRKMFAMRACRS 958
Query: 350 SVMIGRALSVGEMTGLVRNMGRIDQPW 376
S+MIG+ L+ +M +VRNMG ID+PW
Sbjct: 959 SIMIGKTLTTKQMERVVRNMGTIDKPW 985
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K NEVY FN Q PF+ + M ++ DVNV+PDKR I + L+ ++K +T+ +
Sbjct: 293 KAFNEVYKSFNVSQSPFVFADFHMDTNAYDVNVSPDKRTILLHDAGALIESLKTSLTEVF 352
>gi|392868507|gb|EAS34304.2| DNA mismatch repair protein MutL [Coccidioides immitis RS]
Length = 1026
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 111/320 (34%), Positives = 170/320 (53%), Gaps = 60/320 (18%)
Query: 96 EVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTL 155
+ ET VPSE+N +H+ + + D T+E+ M + GS + +
Sbjct: 663 QAAEETANVPSENNLERAHKMSKRSRGR-------DSTVEL---MCSVDGSLAK---IEA 709
Query: 156 SLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIV 215
L ++Q+ L++ + +A + + D AE+ L+ + K F KM++V
Sbjct: 710 QLKLLQENLESL---KNYKASEEPISEEASEQQD-----SAETRLSLTVSKDDFAKMRVV 761
Query: 216 GQFNLGFIIV---KYDS----------DLFIIDQHATDEKYNFETLQKTTLIKSQKLVVP 262
GQFNLGFI+ DS +LFIIDQHA+DEKYNFE LQ T++++Q+LV P
Sbjct: 762 GQFNLGFILAIRPGTDSTDFQDNPTKDELFIIDQHASDEKYNFERLQAETVVQNQRLVRP 821
Query: 263 QNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNV----LLTSLPMSKNTTLGREDIE 318
+ L LT + + ++ DN+P KNGF D+S D + L SLP+SK D+E
Sbjct: 822 KTLDLTAVEEEVIIDNIPTLEKNGFIVDIDTSGDEPIGRRCKLISLPLSKEVVFNTRDLE 881
Query: 319 ELLFML----QH-------------TNSTEHC-----RPSRIRAMFASRACRKSVMIGRA 356
EL+ +L QH ++S++ RP ++R MFA RACR S+MIG++
Sbjct: 882 ELIVLLSESPQHHRAPQGDGDVDPASSSSQFTNLYVPRPGKVRKMFAMRACRSSIMIGKS 941
Query: 357 LSVGEMTGLVRNMGRIDQPW 376
L+V +M +VR+MG ID+PW
Sbjct: 942 LTVKQMERVVRHMGMIDKPW 961
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
+ NEVY FN Q PFI N EM+ ++ DVNV+PDKR I + L+ ++K +T+ +
Sbjct: 297 RAFNEVYRSFNISQSPFIFANFEMNTNAYDVNVSPDKRTILLHDAGALIESLKTSLTELF 356
>gi|302881957|ref|XP_003039889.1| hypothetical protein NECHADRAFT_50420 [Nectria haematococca mpVI
77-13-4]
gi|256720756|gb|EEU34176.1| hypothetical protein NECHADRAFT_50420 [Nectria haematococca mpVI
77-13-4]
Length = 1021
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/202 (44%), Positives = 125/202 (61%), Gaps = 20/202 (9%)
Query: 195 EAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDS--------------DLFIIDQHATD 240
+AE +L+ I + F KM+I GQFNLGFII + +LFI+DQHATD
Sbjct: 782 DAEEKLSLTIARKDFLKMRIAGQFNLGFIIAVRPAQARSDDELELSEHDELFIVDQHATD 841
Query: 241 EKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVL 300
EKYNFE LQ+ ++SQ+LV P+ L LT + + I+ N+ NGF+ D S D V
Sbjct: 842 EKYNFERLQQAQTVQSQRLVHPKRLELTALEEEIVMQNISAIEANGFKVHVDMSGDEPVG 901
Query: 301 ----LTSLPMSKNTTLGREDIEELLFML-QHTNSTEHC-RPSRIRAMFASRACRKSVMIG 354
+ +LPMS+ T D EEL+ +L + ++ ++H RPS++R MFASRACR SVMIG
Sbjct: 902 SRCEVLALPMSREVTFTLTDFEELIALLGEESSESKHVPRPSKVRKMFASRACRSSVMIG 961
Query: 355 RALSVGEMTGLVRNMGRIDQPW 376
+ L+ G+M LVR+M +D+PW
Sbjct: 962 KPLTQGQMETLVRHMADLDKPW 983
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K NEVY +N Q PFI+ +I++ DVNV+PDKR I + + LL ++ +TD +
Sbjct: 297 KAFNEVYRSYNASQSPFILADIQLDTHMYDVNVSPDKRSILLHDQNELLDNLRTSLTDLF 356
>gi|268557254|ref|XP_002636616.1| C. briggsae CBR-PMS-2 protein [Caenorhabditis briggsae]
Length = 797
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 82/183 (44%), Positives = 118/183 (64%), Gaps = 2/183 (1%)
Query: 195 EAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLI 254
+AE +L+R + K F KM+I+GQFN GFII + LFI+DQHA+DEKYNFE LQ + +
Sbjct: 594 DAERQLSRSLTKDDFTKMQIIGQFNHGFIICRLRGHLFIVDQHASDEKYNFERLQNSAKL 653
Query: 255 KSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDG-NVLLTSLPMSKNTTLG 313
Q L P L + + I+++NLP+F NGF+F F D LT+ P + L
Sbjct: 654 TKQPLFTPIALGFGSVQELIIRENLPIFQANGFDFDFREKDGCLKTFLTARPELLSQQLT 713
Query: 314 REDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRID 373
D+EE+L ++ + + RP RIR +FAS+ACRKSVMIG+ L+ EMT ++R++ ++D
Sbjct: 714 NSDLEEILAVVSEYPNQMY-RPVRIRNIFASKACRKSVMIGKPLNHREMTRIIRHLSKLD 772
Query: 374 QPW 376
QPW
Sbjct: 773 QPW 775
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 42/59 (71%)
Query: 3 LVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
+ N+VY QFN +QYP I+L I++ + +DVNVTPDK+ + ++ E+ LLA ++ + +Y
Sbjct: 303 VTNDVYKQFNKNQYPIIVLFIDVPPEKIDVNVTPDKKTVMLEKERHLLAVIRASMMKTY 361
>gi|71001986|ref|XP_755674.1| DNA mismatch repair protein (Pms1) [Aspergillus fumigatus Af293]
gi|66853312|gb|EAL93636.1| DNA mismatch repair protein (Pms1), putative [Aspergillus fumigatus
Af293]
gi|159129732|gb|EDP54846.1| DNA mismatch repair protein (Pms1), putative [Aspergillus fumigatus
A1163]
Length = 1044
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/204 (43%), Positives = 122/204 (59%), Gaps = 26/204 (12%)
Query: 197 ESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSD---------LFIIDQHATDEKYNFET 247
E L+ + K F +M+I+GQFNLGFI+ S+ LFIIDQHA+DEK+NFE
Sbjct: 771 EERLSLTVTKDDFARMRIIGQFNLGFILATRPSEDGSADSKDELFIIDQHASDEKFNFER 830
Query: 248 LQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGN------VLL 301
LQ T++++Q+LV P+ L LT + + I+ +N KNGF D D GN L
Sbjct: 831 LQAETVVQNQRLVQPKRLDLTAVEEEIVIENRAALEKNGFVVEVD--DSGNEPIGQRCKL 888
Query: 302 TSLPMSKNTTLGREDIEELLFMLQHTNSTEH---------CRPSRIRAMFASRACRKSVM 352
SLP+SK G D+EEL+ +L +T+ RPS++R MFA RACR S+M
Sbjct: 889 ISLPLSKEVVFGVRDLEELIVLLSEMPATDSRGSAMQTHIPRPSKVRKMFAMRACRSSIM 948
Query: 353 IGRALSVGEMTGLVRNMGRIDQPW 376
IG++L+ +M +VRNMG ID+PW
Sbjct: 949 IGKSLTQTQMVRVVRNMGTIDKPW 972
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K NEVY FN Q PF+ ++ M ++ DVNV+PDKR I + L+ ++K +T+ +
Sbjct: 292 KAFNEVYKSFNVSQSPFVFADLHMDTNAYDVNVSPDKRTILLHDAGALIDSLKQSLTEMF 351
>gi|169606051|ref|XP_001796446.1| hypothetical protein SNOG_06058 [Phaeosphaeria nodorum SN15]
gi|160706903|gb|EAT87122.2| hypothetical protein SNOG_06058 [Phaeosphaeria nodorum SN15]
Length = 1051
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 93/203 (45%), Positives = 118/203 (58%), Gaps = 19/203 (9%)
Query: 193 NKE-AESELNRVIKKSMFEKMKIVGQFNLGFIIV-------KYDSDLFIIDQHATDEKYN 244
NKE E L+ + K F +M+I+GQFNLGFII SDLFIIDQHA+DEKYN
Sbjct: 791 NKEDPEERLSLTVTKPDFNEMRIIGQFNLGFIIAVRPPTTTSPTSDLFIIDQHASDEKYN 850
Query: 245 FETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGN----VL 300
FE L TT + SQ+LV P L LT + + I+ N NGF D++DD +
Sbjct: 851 FERLSATTTLVSQRLVHPHPLELTAVEEEIILANEHALTANGFVVEMDTADDLDSGHRAK 910
Query: 301 LTSLPMSKNTTLGREDIEELLFML-------QHTNSTEHCRPSRIRAMFASRACRKSVMI 353
L SLPMSK T D+EELL ++ ST RPS++R + ASRACR SVMI
Sbjct: 911 LISLPMSKEVTFTPTDLEELLALILDNPPSSTMATSTHIPRPSKVRKLLASRACRSSVMI 970
Query: 354 GRALSVGEMTGLVRNMGRIDQPW 376
G+ L M +VR+MG +D+PW
Sbjct: 971 GKTLKTARMREIVRHMGSMDKPW 993
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 39/60 (65%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K +NEVY +N Q PFI +I++ ++ DVNV+PDKR I + + +LL ++K + D +
Sbjct: 311 KAINEVYKSYNITQSPFIFADIQLDTNAYDVNVSPDKRTIMLHDQVVLLESLKEALLDLF 370
>gi|358399008|gb|EHK48359.1| hypothetical protein TRIATDRAFT_46780 [Trichoderma atroviride IMI
206040]
Length = 958
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 90/203 (44%), Positives = 129/203 (63%), Gaps = 24/203 (11%)
Query: 195 EAESELNRVIKKSMFEKMKIVGQFNLGFIIV-------------KYDSDLFIIDQHATDE 241
+AES+L +I K F +MKI+GQFNLGFII K+D +LFIIDQHA+DE
Sbjct: 716 DAESKLPLIITKGDFSRMKIIGQFNLGFIIAVKPARRMSTDSGGKHD-ELFIIDQHASDE 774
Query: 242 KYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVL- 300
KYN+E LQ TT I+SQ+LV P L LT + + I+ +N NGF+ + D++ GN+
Sbjct: 775 KYNYEKLQNTTEIQSQRLVHPMRLRLTALEEEIILENSSALNANGFKVTIDTT--GNLPV 832
Query: 301 -----LTSLPMSKNTTLGREDIEELLFML--QHTNSTEHCRPSRIRAMFASRACRKSVMI 353
L +LP+S+ T ED+EEL+ +L + S+ RPS+++ M A RACR S+MI
Sbjct: 833 GSRCHLMALPLSREVTFKLEDLEELISLLGDKSAESSYIPRPSKVQKMLAMRACRSSIMI 892
Query: 354 GRALSVGEMTGLVRNMGRIDQPW 376
G+A++ +M LV +MG +D+PW
Sbjct: 893 GKAMTRSQMHSLVNHMGELDKPW 915
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 5/76 (6%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHIT--- 58
K+ NEVY +NN Q PFI ++++ DVNV+PDKR I + + LL T+++ ++
Sbjct: 297 KVFNEVYRLYNNSQSPFIFADVQLDTMLYDVNVSPDKRSILLHDQNNLLDTLRISLSQLF 356
Query: 59 DSY--AIGFTVDGNNM 72
DS+ +I T N+
Sbjct: 357 DSHEDSISITTSAENV 372
>gi|451849193|gb|EMD62497.1| hypothetical protein COCSADRAFT_38419 [Cochliobolus sativus ND90Pr]
Length = 1058
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 92/207 (44%), Positives = 120/207 (57%), Gaps = 21/207 (10%)
Query: 191 SKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIV-------KYDSDLFIIDQHATDEKY 243
S +EAE L+ + K+ F KM+I+GQFNLGFII +S LFIIDQHA+DEKY
Sbjct: 804 SNGEEAEERLSLTVTKADFGKMRIIGQFNLGFIIAVRPPTSTSPNSHLFIIDQHASDEKY 863
Query: 244 NFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDD------G 297
NFE L TT + SQ+LV P L LT + + I+ N P NGF + + D
Sbjct: 864 NFERLSATTKLVSQRLVHPHPLELTAVEEEIILANQPTLTANGFVVELNPTSDTEPRPGT 923
Query: 298 NVLLTSLPMSKNTTLGREDIEELLFML--------QHTNSTEHCRPSRIRAMFASRACRK 349
LTSLPMSK T D+EELL ++ ++S RPS++R + ASRACR
Sbjct: 924 RASLTSLPMSKEVTFTPSDLEELLSLILDNPPSSSTSSSSAYILRPSKVRKLLASRACRS 983
Query: 350 SVMIGRALSVGEMTGLVRNMGRIDQPW 376
SVMIG+ L M +VR+MG +D+PW
Sbjct: 984 SVMIGKTLKTQRMREIVRHMGGMDKPW 1010
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 34/53 (64%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVK 54
K NEVY +N Q PF+ +I++ ++ DVNV+PDKR I + + +LL +K
Sbjct: 301 KAFNEVYKSYNTTQSPFVFADIKLDTNAYDVNVSPDKRTIMLHDQAVLLENIK 353
>gi|154275042|ref|XP_001538372.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150414812|gb|EDN10174.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 1068
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 90/221 (40%), Positives = 127/221 (57%), Gaps = 40/221 (18%)
Query: 196 AESELNRVIKKSMFEKMKIVGQFNLGFIIVKY---------------DSDLFIIDQHATD 240
+E+ L+ + K F +M+I+GQFNLGFIIV + ++FIIDQHA+D
Sbjct: 791 SETRLSLSVSKEDFARMRIIGQFNLGFIIVTRPRGNPNDPRAFPSHKNDEVFIIDQHASD 850
Query: 241 EKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNV- 299
EKYNFE LQ T++++Q+LV P+ L LT + + I+ DNLP KNGF D S D +
Sbjct: 851 EKYNFERLQAETVVQNQRLVKPKILTLTAVEEEIIIDNLPALEKNGFVVEVDRSGDEPIG 910
Query: 300 ---LLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHC---------------------RP 335
LTSLP+SK +D+EEL+ +L + T+ RP
Sbjct: 911 RRCKLTSLPLSKEMVFDTQDLEELIVLLGESPQTQSASSPSSSDSVLTPTTLGSKYIPRP 970
Query: 336 SRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
S++R MFA RACR S+MIG+ L+ +M +VR+MG ID+PW
Sbjct: 971 SKVRKMFAMRACRSSIMIGKTLTNKQMDRVVRHMGMIDKPW 1011
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 37/60 (61%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K NEVY FN Q PFI + +M +S DVNV+PDKR I + L+ ++KV +T+ +
Sbjct: 295 KAFNEVYKSFNISQSPFIFADFKMDTNSYDVNVSPDKRTILLHDAGALIESLKVSLTELF 354
>gi|354545349|emb|CCE42077.1| hypothetical protein CPAR2_806260 [Candida parapsilosis]
Length = 880
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 81/175 (46%), Positives = 118/175 (67%), Gaps = 2/175 (1%)
Query: 204 IKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQ 263
I KS F KMKI+GQFNLGFI+V + +++FIIDQHA+DEKYNFE L + I++Q L+ P
Sbjct: 679 ISKSDFLKMKIIGQFNLGFILVNHGTNVFIIDQHASDEKYNFEKLIEQYSIQNQLLIKPH 738
Query: 264 NLHLTKINQCILKDNLPVFYKNGFEFSFDSSD--DGNVLLTSLPMSKNTTLGREDIEELL 321
L L I++ ++ D+ PVF NGF+F+ + ++LTSLP+ KN D EL+
Sbjct: 739 PLELNIIDEMLVIDHEPVFRNNGFKFNINHEGKLGSRIVLTSLPVYKNIMFDTNDFMELI 798
Query: 322 FMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
++ S +H + S+IR + A +ACR S+MIG +LS +MT +VRN+ R+D+PW
Sbjct: 799 NLINEQPSNKHIKCSKIRKILAMKACRSSIMIGSSLSRHKMTQVVRNLSRLDKPW 853
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 39/60 (65%)
Query: 3 LVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYA 62
L+NEVY FN+ QYP +LN+E+ + +DVNV PDK + + +E +L +++ + + Y
Sbjct: 285 LINEVYKSFNHVQYPIYVLNLEIDPELIDVNVLPDKTNVLIHNEARILESIRESLVEFYT 344
>gi|448521759|ref|XP_003868568.1| Pms1 DNA mismatch repair factor [Candida orthopsilosis Co 90-125]
gi|380352908|emb|CCG25664.1| Pms1 DNA mismatch repair factor [Candida orthopsilosis]
Length = 881
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 82/175 (46%), Positives = 116/175 (66%), Gaps = 2/175 (1%)
Query: 204 IKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQ 263
I KS F KMK+VGQFNLGFI+V + +LFIIDQHA+DEKYNFE L + I++Q L+ PQ
Sbjct: 680 ISKSDFLKMKLVGQFNLGFILVHHRDNLFIIDQHASDEKYNFEKLIENYSIQNQPLIRPQ 739
Query: 264 NLHLTKINQCILKDNLPVFYKNGFEFSFDSSD--DGNVLLTSLPMSKNTTLGREDIEELL 321
L L I++ ++ D+ VF NGF+F+ D ++L SLP+ KN D EL+
Sbjct: 740 TLELNIIDEMLVIDHEAVFRHNGFKFTIDHEGKLGSRIVLISLPVYKNIMFDTNDFMELI 799
Query: 322 FMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
++ S +H + S+IR + A +ACR S+MIG LS G+MT +V+N+ R+D+PW
Sbjct: 800 NLVNEQPSNKHIKCSKIRNILAMKACRSSIMIGSPLSRGKMTQVVQNLSRLDKPW 854
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 41/62 (66%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
KL+NEVY FN+ QYP +LN+++ + +DVNV PDK + + +E +L +++ + + Y
Sbjct: 284 KLINEVYKSFNHVQYPIYVLNLDIDPELIDVNVLPDKTNVLIHNESRVLESIRESLIEFY 343
Query: 62 AI 63
+
Sbjct: 344 TM 345
>gi|361131241|gb|EHL02939.1| putative DNA mismatch repair protein PMS1 [Glarea lozoyensis 74030]
Length = 1023
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 99/204 (48%), Positives = 131/204 (64%), Gaps = 17/204 (8%)
Query: 187 NIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDS------------DLFII 234
+ID SK AE +L+ I K F KM+IVGQFNLGFI+ S DLFII
Sbjct: 745 SIDSSK---AEEKLSLTISKPDFAKMRIVGQFNLGFILATRTSITQPSEGQALADDLFII 801
Query: 235 DQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSF-DS 293
DQHA+DEKYNFE LQ TT+++SQ+LV P+ L LT + + I+ +N +NGF SF D+
Sbjct: 802 DQHASDEKYNFERLQSTTIVQSQRLVHPKLLSLTALEEEIVLENQKALSQNGFNISFNDT 861
Query: 294 SDDGN-VLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVM 352
G L SLP+S+ T G ED++ELL +L + RPS++R MFA RACR S+M
Sbjct: 862 LPVGTRCSLISLPLSRETVFGLEDLDELLALLTEYPNGSIPRPSKVRKMFAMRACRSSIM 921
Query: 353 IGRALSVGEMTGLVRNMGRIDQPW 376
IG++LS +M +VR+MG ID+PW
Sbjct: 922 IGKSLSGKQMGNVVRHMGEIDKPW 945
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 31/53 (58%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVK 54
K NEVY +N Q PFI NIE+ DVNV+PDKR I + + +L +K
Sbjct: 192 KAFNEVYKAYNGSQSPFIFANIELDTHLYDVNVSPDKRTIMLHDQTRMLENLK 244
>gi|452001350|gb|EMD93810.1| hypothetical protein COCHEDRAFT_1171976 [Cochliobolus
heterostrophus C5]
Length = 1017
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/207 (43%), Positives = 120/207 (57%), Gaps = 21/207 (10%)
Query: 191 SKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIV-------KYDSDLFIIDQHATDEKY 243
S +EAE L+ + K+ F KM+I+GQFNLGFII +S LFIIDQHA+DEKY
Sbjct: 764 SNGEEAEERLSLTVTKADFGKMRIIGQFNLGFIIAVRPPTSTSPNSHLFIIDQHASDEKY 823
Query: 244 NFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDD------G 297
NFE L TT + SQ+LV P L LT + + I+ N P NGF + + +
Sbjct: 824 NFERLSATTKLVSQRLVHPHPLELTAVEEEIILANQPTLAANGFVVELNPTSETEPRPGT 883
Query: 298 NVLLTSLPMSKNTTLGREDIEELLFML--------QHTNSTEHCRPSRIRAMFASRACRK 349
LTSLPMSK T D+EELL ++ ++S RPS++R + ASRACR
Sbjct: 884 RASLTSLPMSKEVTFTPSDLEELLSLILDNPPSSSTSSSSAYILRPSKVRKLLASRACRS 943
Query: 350 SVMIGRALSVGEMTGLVRNMGRIDQPW 376
SVMIG+ L M +VR+MG +D+PW
Sbjct: 944 SVMIGKTLKTQRMREIVRHMGGMDKPW 970
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 34/53 (64%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVK 54
K NEVY +N Q PFI +I++ ++ DVNV+PDKR I + + +LL +K
Sbjct: 301 KAFNEVYKSYNITQSPFIFADIKLDTNAYDVNVSPDKRTIMLHDQAVLLENIK 353
>gi|121716012|ref|XP_001275615.1| DNA mismatch repair protein (Pms1), putative [Aspergillus clavatus
NRRL 1]
gi|119403772|gb|EAW14189.1| DNA mismatch repair protein (Pms1), putative [Aspergillus clavatus
NRRL 1]
Length = 1062
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/239 (39%), Positives = 133/239 (55%), Gaps = 32/239 (13%)
Query: 160 IQDQLKARYARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFN 219
+QD L+A YAR +D + + AE L+ + K F +M+I+GQFN
Sbjct: 763 VQDGLRA-YARGADYTED---------EREATPAGTAEERLSLTVTKDDFARMRIIGQFN 812
Query: 220 LGFIIV---------KYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKI 270
LGFI+ + +LFIIDQHA+DEK+NFE LQ T++++Q+LV + L LT +
Sbjct: 813 LGFILATRSPEGSSSETKDELFIIDQHASDEKFNFERLQAETVVQNQRLVQSKRLDLTAV 872
Query: 271 NQCILKDNLPVFYKNGFEFSFDSSDDGNV----LLTSLPMSKNTTLGREDIEELLFMLQH 326
+ I+ +N KNGF D S D + L SLP+SK G D+EEL+ +L
Sbjct: 873 EEEIVIENQFALEKNGFVVEVDDSGDEPIGQRCKLVSLPLSKEVVFGMRDLEELIVLLSE 932
Query: 327 TNSTEHC---------RPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+T RPS++R MFA RACR S+MIG+ L+ +M +VRNMG ID+PW
Sbjct: 933 MPATTSARSAAPSNIPRPSKVRKMFAMRACRSSIMIGKNLTQKQMVRVVRNMGTIDKPW 991
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K NEVY FN Q PF+ + M ++ DVNV+PDKR I + L+ +K +T+ +
Sbjct: 292 KAFNEVYKSFNVSQSPFVFADFNMDTNAYDVNVSPDKRTILLHDAGALIDALKQSLTELF 351
>gi|374108502|gb|AEY97409.1| FAER421Wp [Ashbya gossypii FDAG1]
Length = 903
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 121/191 (63%), Gaps = 12/191 (6%)
Query: 196 AESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDS----DLFIIDQHATDEKYNFETLQKT 251
AE+ L + K F++M I+GQFNLGFIIV + DLFI+DQHA+DEKYNFE LQK+
Sbjct: 688 AENYLTLTVSKRDFKEMSIIGQFNLGFIIVARRAENKHDLFIVDQHASDEKYNFENLQKS 747
Query: 252 TLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSS--DDGNVLLTSLPMSKN 309
T+ SQ L+ P + L+ I++ ++ +NLP+F KNGF+ + + + LT +P SK
Sbjct: 748 TVFNSQHLIKPLTVELSVIDELLVLENLPLFKKNGFKIRVNEAQKQGSRIELTGMPTSKQ 807
Query: 310 TTLGREDIEELLFMLQHTNSTEH----CRPSRIRAMFASRACRKSVMIGRALSVGEMTGL 365
T ED ELL +L+ + C S+IR+MFA RACR S+MIG+ L+ MT +
Sbjct: 808 TIFDIEDFYELLSLLKECDGVNKNSIAC--SKIRSMFAMRACRMSIMIGKPLTRRTMTEV 865
Query: 366 VRNMGRIDQPW 376
VR + +D+PW
Sbjct: 866 VRKLSELDKPW 876
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 38/53 (71%)
Query: 1 MKLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATV 53
+K N++Y FNN QYP IILN E+S VDVNVTPDKR + + +E+ +L ++
Sbjct: 297 LKCCNDIYRSFNNVQYPVIILNFELSPQFVDVNVTPDKRTVLLHNEEYVLQSL 349
>gi|45191022|ref|NP_985276.1| AER421Wp [Ashbya gossypii ATCC 10895]
gi|44984090|gb|AAS53100.1| AER421Wp [Ashbya gossypii ATCC 10895]
Length = 903
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 121/191 (63%), Gaps = 12/191 (6%)
Query: 196 AESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDS----DLFIIDQHATDEKYNFETLQKT 251
AE+ L + K F++M I+GQFNLGFIIV + DLFI+DQHA+DEKYNFE LQK+
Sbjct: 688 AENYLTLTVSKRDFKEMSIIGQFNLGFIIVARRAENKHDLFIVDQHASDEKYNFENLQKS 747
Query: 252 TLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSS--DDGNVLLTSLPMSKN 309
T+ SQ L+ P + L+ I++ ++ +NLP+F KNGF+ + + + LT +P SK
Sbjct: 748 TVFNSQHLIKPLTVELSVIDELLVLENLPLFKKNGFKIRVNEAQKQGSRIELTGMPTSKQ 807
Query: 310 TTLGREDIEELLFMLQHTNSTEH----CRPSRIRAMFASRACRKSVMIGRALSVGEMTGL 365
T ED ELL +L+ + C S+IR+MFA RACR S+MIG+ L+ MT +
Sbjct: 808 TIFDIEDFYELLSLLKECDGVNKNSIAC--SKIRSMFAMRACRMSIMIGKPLTRRTMTEV 865
Query: 366 VRNMGRIDQPW 376
VR + +D+PW
Sbjct: 866 VRKLSELDKPW 876
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 38/53 (71%)
Query: 1 MKLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATV 53
+K N++Y FNN QYP IILN E+S VDVNVTPDKR + + +E+ +L ++
Sbjct: 297 LKCCNDIYRSFNNVQYPVIILNFELSPQFVDVNVTPDKRTVLLHNEEYVLQSL 349
>gi|405123184|gb|AFR97949.1| ATPase [Cryptococcus neoformans var. grubii H99]
Length = 979
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 91/188 (48%), Positives = 120/188 (63%), Gaps = 19/188 (10%)
Query: 192 KNKE---AESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDS------DLFIIDQHATDEK 242
KNK+ AE L+RVI K+ FEKM++ GQFN GFII + S DLFIIDQHA+DEK
Sbjct: 756 KNKDSELAEEALSRVISKADFEKMEVKGQFNKGFIIARLQSVDDGTDDLFIIDQHASDEK 815
Query: 243 YNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGN---- 298
YNFETLQ+TT IK+Q L+ P+ LHLT ++ I +N+ + NGF+ D +
Sbjct: 816 YNFETLQQTTKIKAQALIKPRALHLTAGDEIIAMENIDILNANGFDVHVDENKPAGKGER 875
Query: 299 VLLTSLPMSKNTTLGREDIEELLFMLQHTN---STEHCRPSRIRAMFASRACRKSVMIGR 355
+ L S+P+SK T D +E L L + S + RP + RAMFASRACRKSVMIG+
Sbjct: 876 ISLLSMPVSKETVF---DFKEQLLQLLSDDSRPSGQMVRPMKARAMFASRACRKSVMIGK 932
Query: 356 ALSVGEMT 363
L+ G+M+
Sbjct: 933 TLTKGQMS 940
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
+ +NEVY FN Q P IL+ ++ +SVD+NV+PDKR IF+ E L+ ++K + +
Sbjct: 280 RAINEVYKSFNTSQLPLAILDFKIPNESVDINVSPDKRTIFVHSEDCLIDSLKTALESFF 339
Query: 62 AIG---FTVDG 69
A FTV+G
Sbjct: 340 APSRNTFTVEG 350
>gi|378731535|gb|EHY57994.1| DNA mismatch repair protein PMS2 [Exophiala dermatitidis
NIH/UT8656]
Length = 1035
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 91/212 (42%), Positives = 125/212 (58%), Gaps = 25/212 (11%)
Query: 190 PSKNKEA--ESELNRVIKKSMFEKMKIVGQFNLGFIIV-------------KYDSDLFII 234
P+ N +A E++L+ + K+ F +M IVGQFNLGFI+ K +LFII
Sbjct: 775 PASNDDADPETQLSLTVSKADFARMDIVGQFNLGFILAVRPAQRSCHDGKQKGRDELFII 834
Query: 235 DQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSS 294
DQHA+DEKYNFE LQ T++ +Q+LV P L LT + + I+ +N KNGF D S
Sbjct: 835 DQHASDEKYNFERLQAETVVGNQRLVQPAILDLTAVEEEIVLENKDALEKNGFIVDIDMS 894
Query: 295 DDGNV----LLTSLPMSKNTTLGREDIEELLFMLQHTN--STEHC----RPSRIRAMFAS 344
+ V L SLP+SK +D+EEL+ +L +EH RPS++R MFA
Sbjct: 895 GESMVGQRCRLVSLPLSKEVVFTTQDLEELIHLLAEAQGVGSEHGAGVPRPSKVRKMFAM 954
Query: 345 RACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
RACR S+MIG+ LS +M +V +MG ID+PW
Sbjct: 955 RACRSSIMIGKTLSKKQMEKVVTHMGTIDKPW 986
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K +NEVY FN Q PFI +++M ++ DVNV+PDKR I + L+ +K + + +
Sbjct: 292 KAINEVYKAFNVTQSPFIFADLQMDTNAYDVNVSPDKRTILLHDSAALIENLKTALNEMF 351
>gi|357149874|ref|XP_003575262.1| PREDICTED: mismatch repair endonuclease PMS2-like [Brachypodium
distachyon]
Length = 921
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/195 (43%), Positives = 120/195 (61%), Gaps = 14/195 (7%)
Query: 196 AESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIK 255
A +EL+R+ K F +M++VGQFNLGFII K D DLFI+DQHA DEKYNFE+L ++T +
Sbjct: 694 ATNELDRLFSKDNFGEMEVVGQFNLGFIIGKLDQDLFIVDQHAADEKYNFESLSQSTTLN 753
Query: 256 SQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFD--SSDDGNVLLTSLPMSKNTTLG 313
Q L+ P L L+ + I+ N+ KNGF + D +S + LL ++P SKN T G
Sbjct: 754 IQPLLHPLRLELSPEEEVIVSMNMTTIRKNGFVLAEDLHASPGNHYLLKAVPFSKNITFG 813
Query: 314 REDIEELLFMLQHT------------NSTEHCRPSRIRAMFASRACRKSVMIGRALSVGE 361
+D++EL+ ML + + T+ PSR+RAM ASRACR S MIG L+ E
Sbjct: 814 VQDMKELISMLTDSQGDCSIISSYKMDKTDSVCPSRVRAMLASRACRMSTMIGDPLTKAE 873
Query: 362 MTGLVRNMGRIDQPW 376
M +++N+ + PW
Sbjct: 874 MKKILKNLTGLRSPW 888
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 10/87 (11%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
KLVNE+Y N+ QYP +LN + S DVNV PDKR+IF E+ +L +++ I + Y
Sbjct: 280 KLVNELYKSSNSKQYPVAVLNFCIPTTSYDVNVAPDKRKIFFSSEQTILLSLREAIENLY 339
Query: 62 ---AIGFTVDGNNMNQSMEQDPSSDVD 85
F+++ + +DP +VD
Sbjct: 340 NPQQCSFSIN-------LIEDPEKEVD 359
>gi|190345899|gb|EDK37866.2| hypothetical protein PGUG_01964 [Meyerozyma guilliermondii ATCC
6260]
Length = 859
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 85/190 (44%), Positives = 117/190 (61%), Gaps = 7/190 (3%)
Query: 194 KEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDS--DLFIIDQHATDEKYNFETL-QK 250
+EAE +L I K F KM++VGQFNLGFI+V + +LFI+DQHA+DEKYNFE L
Sbjct: 642 EEAEKKLVYSISKKDFTKMQVVGQFNLGFILVTLNGGNNLFIVDQHASDEKYNFERLANS 701
Query: 251 TTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSD--DGNVLLTSLPMSK 308
TT+ SQ LVVP+N+ L +++ + NL VF NGF D + V LTSLP+S+
Sbjct: 702 TTMFHSQSLVVPRNMELNALDEMTVLANLEVFKTNGFGLKVDEDEAPGHRVKLTSLPVSR 761
Query: 309 NTTLGREDIEELLFMLQHTNS--TEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLV 366
T D EL+ + S +H + S+IR + ASR+CR S+MIG+ LS M +V
Sbjct: 762 TTVFDESDFHELIHLTNQAGSINNKHVKCSKIRTILASRSCRSSIMIGQPLSTSTMKKVV 821
Query: 367 RNMGRIDQPW 376
N+ +D+PW
Sbjct: 822 HNLSHLDKPW 831
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 40/61 (65%)
Query: 1 MKLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
+K VNEVY FN Q+P ++LNI + D +D+NVTPDKR + + +E +L ++ +T
Sbjct: 296 IKTVNEVYRSFNTVQFPVVVLNIVLDGDFLDINVTPDKRTVMIHNEDVLNDVLRHELTKF 355
Query: 61 Y 61
Y
Sbjct: 356 Y 356
>gi|353238796|emb|CCA70731.1| related to PMS1-DNA mismatch repair protein [Piriformospora indica
DSM 11827]
Length = 876
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 88/190 (46%), Positives = 123/190 (64%), Gaps = 13/190 (6%)
Query: 186 ANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKY----DS--DLFIIDQHAT 239
A +PS +E L+RVI K+ F +M+I+GQFNLGFI+V+ DS DLFI+DQHA
Sbjct: 684 AETNPSNEEEL---LSRVINKADFGRMEILGQFNLGFIVVRARRMEDSMDDLFIVDQHAA 740
Query: 240 DEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDD--- 296
DEKYNFETLQ TT I+SQ+L+ P+ L L+ ++ + +NL + NGFE S +
Sbjct: 741 DEKYNFETLQMTTRIESQRLLRPRPLELSAADKIVALENLDILQSNGFEVVAQSGSEEVI 800
Query: 297 -GNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGR 355
++LL S P+SK+T D+ ELL ++Q R ++ RAMFASRACRKS+MIG
Sbjct: 801 NSDLLLVSQPVSKSTVFDLSDLSELLHLMQDIPKGTMVRCTKARAMFASRACRKSIMIGD 860
Query: 356 ALSVGEMTGL 365
L++ +MT +
Sbjct: 861 PLTIPQMTAV 870
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 40/60 (66%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K VNEVY FN Q P +IL+ + + D+NV+PDKR IF+ E+ L+ ++KV ++D +
Sbjct: 292 KAVNEVYKTFNATQSPLLILDFTVPTAACDINVSPDKRTIFVHGEQNLIESLKVALSDHF 351
>gi|255081839|ref|XP_002508138.1| DNA mismatch repair protein-MLH2/PMS1/Pms2 family [Micromonas sp.
RCC299]
gi|226523414|gb|ACO69396.1| DNA mismatch repair protein-MLH2/PMS1/Pms2 family [Micromonas sp.
RCC299]
Length = 771
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 95/247 (38%), Positives = 127/247 (51%), Gaps = 35/247 (14%)
Query: 165 KARYARRTVQAQDRCVENRFHA--NIDPSKNKE----AESELNRVIKKSMFEKMKIVGQF 218
+AR RR + V +R A + P+ N+ A EL RV ++ F M++VGQF
Sbjct: 507 EARVKRRREGTRGASVNDRATAEGGLGPALNEGGDEVATGELERVFRREDFRDMRVVGQF 566
Query: 219 NLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDN 278
NLGFI+ DLFI+DQHA+DE YNFE LQ+TT + Q L+VP+ L LT + N
Sbjct: 567 NLGFILCTLGDDLFIVDQHASDEIYNFERLQRTTTLNRQPLLVPKKLELTAAETQTVHRN 626
Query: 279 LPVFYKNGFEFSFDSSDDGNV---LLTSLPMSKNTTLGREDIEELLFML----------- 324
+P F NGF F V L S+P SK T G +D+ EL+ ML
Sbjct: 627 MPTFLANGFGFCEVDQPPPTVRSLALNSVPFSKGITFGADDVHELIGMLDQGEYALPARS 686
Query: 325 --------QHTNS-------TEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
Q T + +E RPSR+RAM A RACR S+MIG+AL M ++ N+
Sbjct: 687 QLTVGLSRQSTGTPGSGLSVSEIVRPSRVRAMLAMRACRSSIMIGKALDAKTMRRVLDNL 746
Query: 370 GRIDQPW 376
+ PW
Sbjct: 747 SDLQAPW 753
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Query: 2 KLVNEVYHQFN----NHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVK 54
++ NE Y Q+N +P ++L+ + D+ DVNVTPDKR++ + E +LA ++
Sbjct: 276 RVCNETYRQYNQTTSGTPFPCVVLDFRLPTDAYDVNVTPDKRKVLLHGESKVLAGLR 332
>gi|356536725|ref|XP_003536886.1| PREDICTED: mismatch repair endonuclease PMS2-like [Glycine max]
Length = 944
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/195 (42%), Positives = 112/195 (57%), Gaps = 16/195 (8%)
Query: 198 SELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQ 257
+EL R KK F +MK++GQFNLGFII K D DLFI+DQHA DEKYNFE L ++T++ Q
Sbjct: 722 TELERFFKKEDFSRMKVIGQFNLGFIICKLDQDLFIVDQHAADEKYNFERLSQSTILNQQ 781
Query: 258 KLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFD--SSDDGNVLLTSLPMSKNTTLGRE 315
L+ P L L+ + + ++ + KNGF D + L S+P SKNT G E
Sbjct: 782 PLLRPIKLELSPEEEIVASMHMDIIRKNGFTLEEDPNAPPGCRFKLKSVPFSKNTMFGIE 841
Query: 316 DIEELLFMLQHTNSTEHCR--------------PSRIRAMFASRACRKSVMIGRALSVGE 361
D++EL+ +L + C PSR+RAM ASRACR S+M+G AL E
Sbjct: 842 DVKELISILSDGDGHVECSIVGSYKLDTSDSVCPSRVRAMLASRACRSSIMVGDALGRNE 901
Query: 362 MTGLVRNMGRIDQPW 376
M ++ +M + PW
Sbjct: 902 MQKILEHMAELKSPW 916
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 38/61 (62%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K+VNE+Y N+ QYP +ILN + + DVNVTPDKR+IF E LL ++ + Y
Sbjct: 280 KVVNELYRGANSKQYPIVILNFTVPTRTYDVNVTPDKRKIFFSEENALLQALREGLQQIY 339
Query: 62 A 62
+
Sbjct: 340 S 340
>gi|302509070|ref|XP_003016495.1| hypothetical protein ARB_04784 [Arthroderma benhamiae CBS 112371]
gi|291180065|gb|EFE35850.1| hypothetical protein ARB_04784 [Arthroderma benhamiae CBS 112371]
Length = 1020
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/301 (33%), Positives = 152/301 (50%), Gaps = 57/301 (18%)
Query: 132 ETIEVIDDMPRLQGSYRQ-STPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANIDP 190
E E++ PR + S + + + S++ I+ Q+KA RR +R + A+ D
Sbjct: 667 ERAEILIRKPRKKDSTHELACTIDASIEKIESQMKA-LQRRIQSLSNRGLHRGEDADDDG 725
Query: 191 SKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIV------------------KYDSDLF 232
+ E++L+ + K F +M+I+GQFNLGFI+ + +LF
Sbjct: 726 DQQIAPETKLSLAVSKKDFSRMRIIGQFNLGFILATRPGVTGDENSFSTPSAEQEQDELF 785
Query: 233 IIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFD 292
IIDQHA+DEKYNFE LQ T +++Q+LV P+ L LT + + ++ DNL KNGF D
Sbjct: 786 IIDQHASDEKYNFERLQAETTVQNQRLVKPKTLDLTAVEEEVIIDNLAALEKNGFIVEID 845
Query: 293 SSDDGNV----LLTSLPMSKNTTLGREDIEELLFMLQHT-----------------NSTE 331
+S D + L SLP+SK D+EEL+ +L + E
Sbjct: 846 TSGDEPIGRRCKLISLPLSKEVVFDTRDLEELIVLLSEAPQQSQNNLGKRARDELDSDAE 905
Query: 332 HC----------------RPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQP 375
H RPS++R MFA RACR S+MIG+ L+ +M +V++MG ID+P
Sbjct: 906 HIEPPGVASSPFSDYLVPRPSKVRKMFAMRACRSSIMIGKNLTHRQMETVVKHMGTIDKP 965
Query: 376 W 376
W
Sbjct: 966 W 966
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 77/173 (44%), Gaps = 26/173 (15%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K NEVY FN Q PFI N EM + DVNV+PDKR I + L+ ++K +T+ +
Sbjct: 255 KAFNEVYKSFNLSQSPFIFANFEMDTSAYDVNVSPDKRTILLHDAGALIESLKASLTELF 314
Query: 62 AIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPV--------PSEDNSNFS 113
N +Q++ P S + K +S +T P P E N
Sbjct: 315 --------ENEDQTV---PVSQLTFSK--QSQLTPNRGQTPPASVGATQDKPEEPPGNAV 361
Query: 114 HEANLQQSPETVEPDTPDET----IEVIDDMPRLQGSYRQSTPVTLSLDIIQD 162
+ L Q +TVE + P+ T + + RL+G ++STP + + D
Sbjct: 362 YSQELGQD-DTVEENNPEPTQTSQSSIRGVLQRLEGGDQESTPPNTDITVEND 413
>gi|356502864|ref|XP_003520235.1| PREDICTED: mismatch repair endonuclease PMS2-like [Glycine max]
Length = 1036
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/195 (42%), Positives = 112/195 (57%), Gaps = 16/195 (8%)
Query: 198 SELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQ 257
+EL R KK F +MK++GQFNLGFII K D DLFI+DQHA DEKYNFE L ++T++ Q
Sbjct: 724 TELERFFKKEDFSRMKVIGQFNLGFIICKLDQDLFIVDQHAADEKYNFERLSQSTILNQQ 783
Query: 258 KLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFD--SSDDGNVLLTSLPMSKNTTLGRE 315
L+ P L L+ + + ++ + KNGF D + L S+P SKNT G E
Sbjct: 784 PLLRPIKLELSPEEEIVASMHMDIIRKNGFTLEEDPNAPPGCRFKLKSVPFSKNTMFGIE 843
Query: 316 DIEELLFMLQHTNSTEHCR--------------PSRIRAMFASRACRKSVMIGRALSVGE 361
D++EL+ +L + C PSR+RAM ASRACR S+M+G AL E
Sbjct: 844 DVKELISILSDGDGHVECSIVGSYKLDTSDSVCPSRVRAMLASRACRSSIMVGDALGRNE 903
Query: 362 MTGLVRNMGRIDQPW 376
M ++ +M + PW
Sbjct: 904 MQKILEHMAELKSPW 918
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 36/61 (59%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
KLVNE+Y N+ QYP ILN + DVNVTPDKR+IF E +L ++ + Y
Sbjct: 280 KLVNELYKGANSKQYPIAILNFTVPTRVYDVNVTPDKRKIFFSEENAILQALREGLQQIY 339
Query: 62 A 62
+
Sbjct: 340 S 340
>gi|339250250|ref|XP_003374110.1| mismatch repair endonuclease PMS2 [Trichinella spiralis]
gi|316969662|gb|EFV53722.1| mismatch repair endonuclease PMS2 [Trichinella spiralis]
Length = 765
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/200 (41%), Positives = 125/200 (62%), Gaps = 9/200 (4%)
Query: 183 RFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEK 242
+F N+DP+K+ +AE E+ R + + MF +M ++GQFN GFI+ + D DLFI+DQHA+DEK
Sbjct: 551 KFQINVDPAKDAQAEEEVKRFLTRDMFAEMHVIGQFNCGFILTRLDDDLFILDQHASDEK 610
Query: 243 YNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSF-DSSDDGNVLL 301
FET++++T+++SQ LV P +LT ++ ++ +NL F G+ F F D V +
Sbjct: 611 RTFETMRRSTVVQSQLLVHPICSNLTPFDRHVILENLETFKNLGYTFQFPPEGSDEPVKI 670
Query: 302 TSLPMSKNTTLG-REDIEELLFMLQHTNST----EHCRPSRIRAMFASRACRKSVMIGRA 356
SLP+ R D + + +NS+ C P++IR++ ASRACRKSVMIG A
Sbjct: 671 VSLPVCHGQIFDQRGDTTDNILT---SNSSFRVGNLCMPTKIRSILASRACRKSVMIGTA 727
Query: 357 LSVGEMTGLVRNMGRIDQPW 376
LS+ EM +V + I+ PW
Sbjct: 728 LSMEEMQQIVERLSSIEHPW 747
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEM-SRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
+LVNEVYHQFN QYP +L I + + + +DVN TPDKR +++ E LLLA ++ +T+
Sbjct: 213 QLVNEVYHQFNPVQYPVFVLYINVPTAEMLDVNCTPDKRLVYISRENLLLAILRHSLTEM 272
Query: 61 YA 62
Y
Sbjct: 273 YG 274
>gi|389743549|gb|EIM84733.1| hypothetical protein STEHIDRAFT_99554 [Stereum hirsutum FP-91666 SS1]
Length = 1237
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 111/315 (35%), Positives = 151/315 (47%), Gaps = 76/315 (24%)
Query: 138 DDMPRLQGSYRQSTPVT----LSLDIIQ-----DQLKARY--ARRTVQAQDR-------- 178
DD PR + S VT LS D+ + L++R AR T AQ
Sbjct: 888 DDAPRPEIERTSSLSVTDTPTLSFDLSRVTSKWKALRSRLTKARETTTAQASSQSQSNVN 947
Query: 179 CVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDS--------- 229
E A I + +A+ L RV+ K F M++VGQFNLGFI+ +
Sbjct: 948 ASEEVAGAGITCTDGSKADEVLTRVLHKEDFGIMEVVGQFNLGFIVARRRKGGQGAKNGE 1007
Query: 230 ---DLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNG 286
DLFIIDQHA DEKY FETLQ+TT I+SQ+L P+ L LT ++ + +N+ V +NG
Sbjct: 1008 QLDDLFIIDQHAADEKYKFETLQQTTKIESQRLFRPRELELTAADELVAMENISVLKQNG 1067
Query: 287 FE---------------------------------------FSFDSSDDGN------VLL 301
FE + +S +G+ V L
Sbjct: 1068 FEILVEDDEKPISGVGDTDIPLAQANERAELGMAVYNDEEGYEGSASLEGSSGSRRRVKL 1127
Query: 302 TSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGE 361
+ P+S NT ED EELL ++ + R S+ RAMFASRACRKS+M+G AL +
Sbjct: 1128 VAQPISGNTVFDVEDFEELLHKMRDLPTGTMVRCSKARAMFASRACRKSIMVGMALENKQ 1187
Query: 362 MTGLVRNMGRIDQPW 376
MT +VR+MG ++QPW
Sbjct: 1188 MTSVVRHMGTMEQPW 1202
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 70/145 (48%), Gaps = 15/145 (10%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K NEVY FN Q PF++ + + DS D+NV+PDKR I + E L+ +K + + +
Sbjct: 335 KAFNEVYKTFNATQSPFVMADFIIPTDSCDINVSPDKRTILLHSEGHLVEALKNALNEFF 394
Query: 62 AIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQS 121
A + + Q+ Q S +D+ KI+ + EH PS+D + +++ +
Sbjct: 395 APTRSTFDLSSTQTQTQ---SKLDL-KIK---PKATEH----APSDDVTGAQDTEDVEMA 443
Query: 122 PETVEPDTPDETIEVIDDMPRLQGS 146
ET+ D T E PR GS
Sbjct: 444 DETLGLD----TAETSTSTPRSIGS 464
>gi|357442547|ref|XP_003591551.1| DNA mismatch repair protein [Medicago truncatula]
gi|355480599|gb|AES61802.1| DNA mismatch repair protein [Medicago truncatula]
Length = 933
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 113/197 (57%), Gaps = 16/197 (8%)
Query: 196 AESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIK 255
A +EL R+ KK F +MK++GQFNLGFII K D DLFI+DQHA DEKYNFE L ++T++
Sbjct: 709 AATELERLFKKEYFSRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFECLSQSTILN 768
Query: 256 SQKLVVPQNLHLTKINQCILKDNLPVFYKNGF--EFSFDSSDDGNVLLTSLPMSKNTTLG 313
Q L+ P L L+ + + ++ + KNGF E ++ L S+P SKNT G
Sbjct: 769 QQPLLRPIRLELSPEEEIVASIHMDIIRKNGFTLEEDLNAPPGCRYKLKSVPYSKNTMFG 828
Query: 314 REDIEELLFMLQHTNSTEHCR--------------PSRIRAMFASRACRKSVMIGRALSV 359
ED+++L+ L + C P R+RAM ASRACR S+MIG AL
Sbjct: 829 VEDVKDLISTLSDGDGHGECSIIGSYRQDSSDSICPPRVRAMLASRACRSSIMIGDALGR 888
Query: 360 GEMTGLVRNMGRIDQPW 376
EM ++ ++ + PW
Sbjct: 889 NEMQKILEHLAELKSPW 905
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 37/61 (60%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
KLVNE+Y N+ QYP I+N + + DVNVTPDKR+IF E LL ++ + Y
Sbjct: 280 KLVNELYRSANSKQYPIAIMNFTVPTKAYDVNVTPDKRKIFFSEETSLLQALREGLQQIY 339
Query: 62 A 62
+
Sbjct: 340 S 340
>gi|115447025|ref|NP_001047292.1| Os02g0592300 [Oryza sativa Japonica Group]
gi|50726475|dbj|BAD34084.1| putative PMS2 postmeiotic segregation increased 2 [Oryza sativa
Japonica Group]
gi|113536823|dbj|BAF09206.1| Os02g0592300 [Oryza sativa Japonica Group]
gi|218191082|gb|EEC73509.1| hypothetical protein OsI_07875 [Oryza sativa Indica Group]
gi|222623151|gb|EEE57283.1| hypothetical protein OsJ_07338 [Oryza sativa Japonica Group]
Length = 923
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 83/195 (42%), Positives = 116/195 (59%), Gaps = 14/195 (7%)
Query: 196 AESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIK 255
A SEL+++ K F +M++VGQFNLGFII K D DLFI+DQHA DEKYNFE L ++T +
Sbjct: 701 ATSELDKLFSKDDFGEMEVVGQFNLGFIIGKLDQDLFIVDQHAADEKYNFENLSQSTTLN 760
Query: 256 SQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFD--SSDDGNVLLTSLPMSKNTTLG 313
Q L+ P L L+ + I+ N+ KNGF + D +S + ++P SKN T G
Sbjct: 761 IQPLLQPLRLDLSPEEEVIVSMNMSTIRKNGFVLAEDLHASPCNRYFIKAVPFSKNITFG 820
Query: 314 REDIEELLFMLQHTNS------------TEHCRPSRIRAMFASRACRKSVMIGRALSVGE 361
+D++EL+ ML + T+ PSR+RAM ASRACR S MIG L+ E
Sbjct: 821 AQDVKELISMLADSQGDCSIISSYKLDRTDSICPSRVRAMLASRACRMSTMIGDPLTKTE 880
Query: 362 MTGLVRNMGRIDQPW 376
M +++N+ + PW
Sbjct: 881 MKKILKNLTGLRSPW 895
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 52/98 (53%), Gaps = 7/98 (7%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
KLVNE+Y N QYP +LN + S DVNV PDKR+IF E +L +++ I + Y
Sbjct: 281 KLVNELYRSSNAKQYPVAVLNFCIPTTSYDVNVAPDKRKIFFSSEHAILLSLREGIENLY 340
Query: 62 A---IGFTVDGNNMNQSMEQDPS---SDVDMEKIQRSN 93
F+++ + E DP+ SD DM ++ N
Sbjct: 341 CPQQCSFSINSVE-DPGKEMDPAIDGSDEDMCLTEKEN 377
>gi|444724302|gb|ELW64912.1| Mismatch repair endonuclease PMS2 [Tupaia chinensis]
Length = 1411
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/196 (42%), Positives = 113/196 (57%), Gaps = 47/196 (23%)
Query: 174 QAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFI 233
Q++D+ +F A I P +N+ AE EL + I K+MF +M+I+GQFNLGFII K + D+FI
Sbjct: 668 QSEDKQNYRKFRAKICPGENQAAEDELRKEISKTMFAEMEIIGQFNLGFIITKLNEDIFI 727
Query: 234 IDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDS 293
+DQHATDEKYNFE LQ+ T+++ Q+L+
Sbjct: 728 VDQHATDEKYNFEVLQQHTVLQGQRLI--------------------------------- 754
Query: 294 SDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMI 353
+KN T G +DI+EL+FML + CRPSR+R MFASRACRKSVMI
Sbjct: 755 -------------AKNWTFGPQDIDELIFMLSDSPGV-MCRPSRVRQMFASRACRKSVMI 800
Query: 354 GRALSVGEMTGLVRNM 369
G AL+ EM L+ +M
Sbjct: 801 GTALNTNEMKKLITHM 816
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/111 (45%), Positives = 72/111 (64%), Gaps = 13/111 (11%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
+LVNEVYH +N HQYPF++LNI + + VD+NVTPDKRQI + EKLLLA +K +
Sbjct: 332 RLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSL---- 387
Query: 62 AIG-FTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPS-EDNS 110
IG F D N + S+ Q P D++ I R++ ++E P+P+ +DNS
Sbjct: 388 -IGMFDSDVNKL--SVNQQPLLDIEGNLI-RTHVTDIER---PLPAKQDNS 431
>gi|302655606|ref|XP_003019589.1| hypothetical protein TRV_06385 [Trichophyton verrucosum HKI 0517]
gi|291183322|gb|EFE38944.1| hypothetical protein TRV_06385 [Trichophyton verrucosum HKI 0517]
Length = 1103
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/279 (34%), Positives = 142/279 (50%), Gaps = 56/279 (20%)
Query: 153 VTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKM 212
+ S++ I+ Q+K+ RR +R + A+ D + E++L+ + K F +M
Sbjct: 772 IDASIEKIETQMKS-LQRRIQSLSNRGLHRVEDADDDGDQQIAPETKLSLAVSKKDFSRM 830
Query: 213 KIVGQFNLGFIIV------------------KYDSDLFIIDQHATDEKYNFETLQKTTLI 254
+I+GQFNLGFI+ + +LFIIDQHA+DEKYNFE LQ T +
Sbjct: 831 RIIGQFNLGFILATRPGVTGDENSFSTPSAEQEQDELFIIDQHASDEKYNFERLQAETTV 890
Query: 255 KSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNV----LLTSLPMSKNT 310
++Q+LV P+ L LT + + ++ DNL KNGF D+S D + L SLP+SK
Sbjct: 891 QNQRLVKPKTLDLTAVEEEVIIDNLAALEKNGFIVEIDTSGDEPIGRRCKLISLPLSKEV 950
Query: 311 TLGREDIEELLFMLQHT-----------------NSTEHC----------------RPSR 337
D+EEL+ +L + EH RPS+
Sbjct: 951 VFDTRDLEELIVLLSEAPQQSQNNLGKRARDELDSDAEHTEPPGVASSPFSDYLVPRPSK 1010
Query: 338 IRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+R MFA RACR S+MIG+ L+ +M +V++MG ID+PW
Sbjct: 1011 VRKMFAMRACRSSIMIGKNLTHRQMETVVKHMGTIDKPW 1049
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K NEVY FN Q PFI N EM + DVNV+PDK+ I + L+ ++K +T+ +
Sbjct: 338 KAFNEVYKSFNLSQSPFIFANFEMDTSAYDVNVSPDKQTILLHDAGALIESLKASLTELF 397
>gi|146420678|ref|XP_001486293.1| hypothetical protein PGUG_01964 [Meyerozyma guilliermondii ATCC
6260]
Length = 859
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/190 (43%), Positives = 116/190 (61%), Gaps = 7/190 (3%)
Query: 194 KEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDS--DLFIIDQHATDEKYNFETL-QK 250
+EAE +L +I K F KM++VGQFNLGFI+V + +LFI+DQHA+DEKYNFE L
Sbjct: 642 EEAEKKLVYLISKKDFTKMQVVGQFNLGFILVTLNGGNNLFIVDQHASDEKYNFERLANS 701
Query: 251 TTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSD--DGNVLLTSLPMSK 308
TT+ SQ LVVP+N+ L +++ + NL VF NGF D + V LTSLP+ +
Sbjct: 702 TTMFHSQLLVVPRNMELNALDEMTVLANLEVFKTNGFGLKVDEDEAPGHRVKLTSLPVLR 761
Query: 309 NTTLGREDIEELLFMLQHTNS--TEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLV 366
T D EL+ + S +H + S+IR + A R+CR S+MIG+ LS M +V
Sbjct: 762 TTVFDESDFHELIHLTNQAGSINNKHVKCSKIRTILALRSCRSSIMIGQPLSTSTMKKVV 821
Query: 367 RNMGRIDQPW 376
N+ +D+PW
Sbjct: 822 HNLSHLDKPW 831
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 40/61 (65%)
Query: 1 MKLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
+K VNEVY FN Q+P ++LNI + D +D+NVTPDKR + + +E +L ++ +T
Sbjct: 296 IKTVNEVYRSFNTVQFPVVVLNIVLDGDFLDINVTPDKRTVMIHNEDVLNDVLRHELTKF 355
Query: 61 Y 61
Y
Sbjct: 356 Y 356
>gi|50305491|ref|XP_452705.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641838|emb|CAH01556.1| KLLA0C11319p [Kluyveromyces lactis]
Length = 923
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 121/191 (63%), Gaps = 8/191 (4%)
Query: 194 KEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDS----DLFIIDQHATDEKYNFETLQ 249
++AE L + K+ F+ M IVGQFNLGFIIV DLFI+DQHA+DEKYNFE LQ
Sbjct: 706 EKAEHLLTLTVSKNDFQNMTIVGQFNLGFIIVTRCKEGAFDLFIVDQHASDEKYNFEMLQ 765
Query: 250 KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGN--VLLTSLPMS 307
K T+ KSQ L+ + L L+ I++ ++ + VF KNGF+ S D ++ + L S P+S
Sbjct: 766 KNTVFKSQSLLSLKTLELSVIDELLVMEYKDVFSKNGFKLSIDQEEEPGQRIKLVSFPVS 825
Query: 308 KNTTLGREDIEELLFMLQ--HTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGL 365
KNT D EL+ +++ + + R S+IR+MFA RACR S+MIG+ LS+ M +
Sbjct: 826 KNTMFTEYDFHELIQLIREHEGHDMSNIRCSKIRSMFAMRACRSSIMIGKPLSMRTMKKV 885
Query: 366 VRNMGRIDQPW 376
V N+ +++PW
Sbjct: 886 VNNLSDLEKPW 896
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVK 54
K +NE Y FNN QYP +L+ + +D+NVTPDKR + + +E+ +L ++
Sbjct: 294 KTINETYQSFNNVQYPSFVLDFRVGTKFLDLNVTPDKRTVSLHYEEYVLDALR 346
>gi|50552768|ref|XP_503794.1| YALI0E10769p [Yarrowia lipolytica]
gi|49649663|emb|CAG79385.1| YALI0E10769p [Yarrowia lipolytica CLIB122]
Length = 893
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 107/183 (58%), Gaps = 2/183 (1%)
Query: 196 AESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIK 255
AES+LN I ++ F I+GQFN FIIV +LFIIDQHA+DEKYNFE LQ+ T I
Sbjct: 684 AESKLNLTISRNDFLNFNIIGQFNEAFIIVSDPENLFIIDQHASDEKYNFERLQRDTKIT 743
Query: 256 SQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSS--DDGNVLLTSLPMSKNTTLG 313
Q V P + LT + + ++ NL + KNGF + D+S + P + N G
Sbjct: 744 PQPFVNPLTVELTPLEESVVSSNLELLKKNGFLVTIDNSLPPGEKCQIRGFPQTGNIVFG 803
Query: 314 REDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRID 373
D EL+ + + + RP ++R +FASRACR SVM+G AL EM +VRN+ +D
Sbjct: 804 MPDFRELVVLFEDNPGNDSVRPKKVRDVFASRACRGSVMVGTALKEKEMDRIVRNLAGLD 863
Query: 374 QPW 376
+PW
Sbjct: 864 KPW 866
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 38/60 (63%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K+ +VY F + Q P +I+N+++ + DVNV+PDKR I + +E ++ ++ ++ D +
Sbjct: 291 KVFQDVYTSFVHLQKPVLIINLDIPPSAYDVNVSPDKRTIMLHNEVDVINCIRENLVDVF 350
>gi|67540292|ref|XP_663920.1| hypothetical protein AN6316.2 [Aspergillus nidulans FGSC A4]
gi|40739510|gb|EAA58700.1| hypothetical protein AN6316.2 [Aspergillus nidulans FGSC A4]
gi|259479468|tpe|CBF69717.1| TPA: ATP-binding protein (Eurofung) [Aspergillus nidulans FGSC A4]
Length = 1228
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 116/334 (34%), Positives = 169/334 (50%), Gaps = 69/334 (20%)
Query: 104 VPSEDNSNFSHEANLQQSPETVEPDTPDETIEVIDD--MPRL------------------ 143
VPS+DN+ S E + Q P+ + D E + +D + RL
Sbjct: 624 VPSDDNATQSDE-HTQTEPQPAKEDMNAEEKKRREDAEVQRLIEEAGKANQANSISRANK 682
Query: 144 --QG-SYRQS-----TPVTLSLDIIQDQLKA---RYARRTV-QAQDRCVENRFHANIDPS 191
+G SYR S T + SL I+ Q K ++RR + ++D E+R + + P
Sbjct: 683 LHKGVSYRDSTVHLATAINASLSRIESQAKYIHDSHSRRNLSSSEDELDESRL-SQVAP- 740
Query: 192 KNKEAESELNRVIKKSMFEKMKIVGQFNLGFII------------------VKYDSDLFI 233
E L + K F +M+I GQFNLGFI+ + + +LFI
Sbjct: 741 -----EERLTLTVNKDDFARMRIHGQFNLGFILASRTTSTSHRAESDPASGLGFKDELFI 795
Query: 234 IDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDS 293
IDQHA+DEK NFE LQ TT +++Q+LV P+ L LT + + I+ +N + KNGF D
Sbjct: 796 IDQHASDEKINFERLQSTTTVQNQRLVHPKRLDLTAVEEEIVIENQVILEKNGFVVDVDD 855
Query: 294 SDDGNV----LLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHC-------RPSRIRAMF 342
S D + L SLP+SK D+EEL+ +L T++ RPS++R MF
Sbjct: 856 SGDKPIGQRCSLLSLPLSKEVVFDVRDLEELIAILTETSTPNTTGPEIDIPRPSKVRKMF 915
Query: 343 ASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
A RACR S+MIG+ L+ +M +VR+MG ID+PW
Sbjct: 916 AMRACRSSIMIGKTLTQRQMERVVRDMGTIDKPW 949
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVK 54
K +NEVY FN Q PF+ + M ++ DVNV+PDKR I + L+ ++K
Sbjct: 286 KAINEVYKSFNLAQSPFVFADFHMDTNAYDVNVSPDKRTILLHDAGALIESLK 338
>gi|449436509|ref|XP_004136035.1| PREDICTED: mismatch repair endonuclease PMS2-like [Cucumis sativus]
gi|449498483|ref|XP_004160549.1| PREDICTED: mismatch repair endonuclease PMS2-like [Cucumis sativus]
Length = 921
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/190 (42%), Positives = 115/190 (60%), Gaps = 14/190 (7%)
Query: 201 NRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLV 260
+R+ +K F +MK++GQFNLGFII K D DLFI+DQHA DEKYNFE L ++T++ Q L+
Sbjct: 704 DRLFRKKDFSRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTILNQQPLL 763
Query: 261 VPQNLHLTKINQCILKDNLPVFYKNGFEFSFD-SSDDGNVL-LTSLPMSKNTTLGREDIE 318
P L L+ + ++ ++ VF KNGF D S GN L ++P SKN T G ED++
Sbjct: 764 RPLGLELSAEEEVVVSIHMDVFRKNGFTIEEDPRSLPGNRFRLKAVPFSKNITFGVEDVK 823
Query: 319 ELLFMLQHT------------NSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLV 366
+L+ L + ++ + PSR+RAM ASRACR SVMIG L EM ++
Sbjct: 824 DLISTLADSEGECSIIGSYRMDTADSVCPSRVRAMLASRACRSSVMIGDPLGRNEMQKIL 883
Query: 367 RNMGRIDQPW 376
++ + PW
Sbjct: 884 EHLAELKSPW 893
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 68/163 (41%), Gaps = 34/163 (20%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
KLVNE+Y N+ QYP ILN + + DVNVTPDKR+IF E +L T++ + Y
Sbjct: 284 KLVNELYKSANSRQYPIAILNFTLPSKACDVNVTPDKRKIFFSDETHILQTLREELLKIY 343
Query: 62 AIG----------------------------------FTVDGNNMNQSMEQDPSSDVDME 87
+ F+ DG ++ + P +D D
Sbjct: 344 SPTNACYSVNKVEEPTVQVDSLELCSDNGKLSMLLEHFSSDGGDLRDASSHQPKTDDDDS 403
Query: 88 KIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTP 130
+ N E+ H T + S+D N + + ++ T + D P
Sbjct: 404 FNKIKNVEQSPHSTEMLNSDDEENATRKDFALRTHGTKKADVP 446
>gi|327303696|ref|XP_003236540.1| DNA mismatch repair protein [Trichophyton rubrum CBS 118892]
gi|326461882|gb|EGD87335.1| DNA mismatch repair protein [Trichophyton rubrum CBS 118892]
Length = 1038
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 96/279 (34%), Positives = 143/279 (51%), Gaps = 56/279 (20%)
Query: 153 VTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKM 212
+ S++ I+ Q++A R +R + A+ D + E++L+ + K F +M
Sbjct: 707 IDASIEKIESQMRA-LQRGMESLSNRGLHRSEDADDDGDQQIAPETKLSLAVSKKDFGRM 765
Query: 213 KIVGQFNLGFIIV------------------KYDSDLFIIDQHATDEKYNFETLQKTTLI 254
+I+GQFNLGFI+ + +LFIIDQHA+DEKYNFE LQ T +
Sbjct: 766 RIIGQFNLGFILATRPRVTEDDNSSLSPSAEQVQDELFIIDQHASDEKYNFERLQAETTV 825
Query: 255 KSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNV----LLTSLPMSKNT 310
++Q+LV P+ L LT + + ++ DNL KNGF D+S D + L SLP+SK
Sbjct: 826 QNQRLVKPKTLDLTAVEEEVIIDNLAALEKNGFIVEIDTSGDEPIGRRCKLISLPLSKEV 885
Query: 311 TLGREDIEELLFML----QHTNS-------------TEHC----------------RPSR 337
D+EEL+ +L Q + S EH RPS+
Sbjct: 886 VFDTRDLEELIVLLSEAPQQSQSNLGKRARDELDSDAEHIEPSGVASSPFSDYLVPRPSK 945
Query: 338 IRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+R MFA RACR S+MIG+ L+ +M +V++MG ID+PW
Sbjct: 946 VRKMFAMRACRSSIMIGKNLTHRQMETVVKHMGTIDKPW 984
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 35/60 (58%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K NEVY FN Q PFI N EM + DVNV+PDKR I + L+ ++K +T+ +
Sbjct: 273 KAFNEVYKSFNLSQSPFIFANFEMDTSAYDVNVSPDKRTILLHDAGALIESLKASLTELF 332
>gi|326485120|gb|EGE09130.1| hypothetical protein TEQG_08828 [Trichophyton equinum CBS 127.97]
Length = 1039
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 94/279 (33%), Positives = 142/279 (50%), Gaps = 56/279 (20%)
Query: 153 VTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKM 212
+ S++ I+ Q+K+ RR +R + A+ D + E++L+ + K F +M
Sbjct: 708 IDASIEKIESQMKS-LQRRIQSLSNRGLHRGEDADDDGDQQIAPETKLSLAVSKKDFSRM 766
Query: 213 KIVGQFNLGFIIV------------------KYDSDLFIIDQHATDEKYNFETLQKTTLI 254
+I+GQFNLGFI+ + +LFIIDQHA+DEKYNFE LQ T +
Sbjct: 767 RIIGQFNLGFILATRPGVVEDENSSSSPLAEQEQDELFIIDQHASDEKYNFERLQAETTV 826
Query: 255 KSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNV----LLTSLPMSKNT 310
++Q+LV P+ L LT + + ++ DNL KNGF D+S D + L SLP+SK
Sbjct: 827 QNQRLVKPKTLDLTAVEEEVIIDNLAALEKNGFIVEIDTSGDEPIGRRCKLISLPLSKEV 886
Query: 311 TLGREDIEELLFMLQHT-----------------NSTEHC----------------RPSR 337
D+EEL+ +L + E+ RPS+
Sbjct: 887 VFDTRDLEELIVLLSEAPQQSQNNLGKRAREELESDAEYIEPSGVASTPFSDYLVPRPSK 946
Query: 338 IRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+R MFA RACR S+MIG+ L+ +M +V++MG ID+PW
Sbjct: 947 VRKMFAMRACRSSIMIGKNLTHRQMETVVKHMGTIDKPW 985
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 35/60 (58%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K NEVY FN Q PFI N EM + DVNV+PDKR I + L+ ++K +T+ +
Sbjct: 274 KAFNEVYKSFNLSQSPFIFANFEMDTSAYDVNVSPDKRTILLHDAGALIESLKASLTELF 333
>gi|326469732|gb|EGD93741.1| DNA mismatch repair protein [Trichophyton tonsurans CBS 112818]
Length = 1038
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 94/279 (33%), Positives = 142/279 (50%), Gaps = 56/279 (20%)
Query: 153 VTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKM 212
+ S++ I+ Q+K+ RR +R + A+ D + E++L+ + K F +M
Sbjct: 707 IDASIEKIESQMKS-LQRRIQSLSNRGLHRGEDADDDGDQQIAPETKLSLAVSKKDFSRM 765
Query: 213 KIVGQFNLGFIIV------------------KYDSDLFIIDQHATDEKYNFETLQKTTLI 254
+I+GQFNLGFI+ + +LFIIDQHA+DEKYNFE LQ T +
Sbjct: 766 RIIGQFNLGFILATRPGVVEDENSSSSPLAEQEQDELFIIDQHASDEKYNFERLQAETTV 825
Query: 255 KSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNV----LLTSLPMSKNT 310
++Q+LV P+ L LT + + ++ DNL KNGF D+S D + L SLP+SK
Sbjct: 826 QNQRLVKPKTLDLTAVEEEVIIDNLAALEKNGFIVEIDTSGDEPIGRRCKLISLPLSKEV 885
Query: 311 TLGREDIEELLFMLQHT-----------------NSTEHC----------------RPSR 337
D+EEL+ +L + E+ RPS+
Sbjct: 886 VFDTRDLEELIVLLSEAPQQSQNNLGKRAREELESDAEYIEPSGVASTPFSDYLVPRPSK 945
Query: 338 IRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+R MFA RACR S+MIG+ L+ +M +V++MG ID+PW
Sbjct: 946 VRKMFAMRACRSSIMIGKNLTHRQMETVVKHMGTIDKPW 984
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 35/60 (58%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K NEVY FN Q PFI N EM + DVNV+PDKR I + L+ ++K +T+ +
Sbjct: 273 KAFNEVYKSFNLSQSPFIFANFEMDTSAYDVNVSPDKRTILLHDAGALIESLKASLTELF 332
>gi|396487991|ref|XP_003842770.1| similar to DNA mismatch repair protein pms1 [Leptosphaeria maculans
JN3]
gi|312219347|emb|CBX99291.1| similar to DNA mismatch repair protein pms1 [Leptosphaeria maculans
JN3]
Length = 1099
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 90/209 (43%), Positives = 120/209 (57%), Gaps = 26/209 (12%)
Query: 194 KEAESELNRVIKKSMFEKMKIVGQFNLGFIIV-------KYDSDLFIIDQHATDEKYNFE 246
++ E L+ + KS F +M+I+GQFNLGFII SDLFIIDQHA+DEKYNFE
Sbjct: 842 EDPEERLSLTVTKSDFSEMRIIGQFNLGFIIAVRPPTTTSPTSDLFIIDQHASDEKYNFE 901
Query: 247 TLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSF----------DSSDD 296
L TT + SQ+LV P L LT + + I+ N NGF +S D+
Sbjct: 902 RLSATTTLVSQRLVHPHPLELTAVEEEIILANQHALTANGFVVEMNTNPNNANDNNSQDE 961
Query: 297 GN--VLLTSLPMSKNTTLGREDIEELLFML------QHTNSTEHC-RPSRIRAMFASRAC 347
LT+LPMSK T D+EELL ++ T+++ H RPS++R + ASRAC
Sbjct: 962 AGHRAKLTALPMSKEVTFSPTDLEELLALILDNPPSSSTSTSPHIPRPSKVRKLLASRAC 1021
Query: 348 RKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
R SVMIG+ L M +VR+MG +D+PW
Sbjct: 1022 RSSVMIGKTLQPPRMREIVRHMGSMDKPW 1050
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 34/53 (64%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVK 54
K NEVY FN Q PF+ +I + ++ DVNV+PDKR I + ++ +LL +K
Sbjct: 301 KAFNEVYKSFNITQSPFVFADIRLDTNAYDVNVSPDKRTIMLHNQTMLLENLK 353
>gi|407921118|gb|EKG14284.1| DNA mismatch repair protein [Macrophomina phaseolina MS6]
Length = 915
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 87/217 (40%), Positives = 123/217 (56%), Gaps = 33/217 (15%)
Query: 193 NKEAESELNRVIKKSMFEKMKIVGQFNLGFII-VKYDSD--------------------- 230
++ E L+ + KS F +M+I+GQFNLGFI+ V+ SD
Sbjct: 646 DQSPEERLSLTVSKSDFGRMRIIGQFNLGFILAVRPGSDVLSKSTTNPTSTPAPCTVSNA 705
Query: 231 --LFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFE 288
LFIIDQHA+DEK NFE L TT++ Q+LV P L LT I + I+ + F NGF+
Sbjct: 706 DELFIIDQHASDEKINFERLTNTTILAPQRLVHPHTLDLTAIEEEIILSHPSAFAANGFQ 765
Query: 289 FSFDSSDDGNV----LLTSLPMSKNTTLGREDIEELLFMLQHTNSTEH-----CRPSRIR 339
+ D+S + V L LP+SK TT D+EEL+ +L ++ + RPS++R
Sbjct: 766 LTTDTSGEAPVGNRCSLLGLPVSKETTFTVSDLEELITLLSESSLSPEKESSIPRPSKVR 825
Query: 340 AMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
M A RACR S+MIG+ L+ +M +VR+MG ID+PW
Sbjct: 826 KMLAMRACRSSIMIGKTLTQRQMERVVRDMGAIDKPW 862
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 28/42 (66%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFM 43
K VNEVY FN Q PFI ++ M ++ DVNV+PDKR I +
Sbjct: 106 KAVNEVYKSFNVTQSPFIFADLVMDTNAYDVNVSPDKRTILL 147
>gi|358053762|dbj|GAB00070.1| hypothetical protein E5Q_06772 [Mixia osmundae IAM 14324]
Length = 862
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 84/186 (45%), Positives = 121/186 (65%), Gaps = 6/186 (3%)
Query: 197 ESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDS----DLFIIDQHATDEKYNFETLQKTT 252
E+ L R + + F +M+I+GQFNLGFIIV+ D+FIIDQHA+DEKYNFE LQ T
Sbjct: 644 EASLTRTVAQEDFSRMQILGQFNLGFIIVRRSERSQDDIFIIDQHASDEKYNFERLQAHT 703
Query: 253 LIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFD--SSDDGNVLLTSLPMSKNT 310
++SQ+L+ P+ LH T ++ + ++ + NGFE + + + V L + PMS+ T
Sbjct: 704 KMQSQRLLAPRLLHWTASDELLAIEHEEILRANGFEIAVEREARVGQRVKLIAQPMSQKT 763
Query: 311 TLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMG 370
T G ++EELLF+L+ RP++ R MFA RACR SVMIG ALS +MT ++R+MG
Sbjct: 764 TFGVPELEELLFLLRENGGRTMVRPTKTRKMFAMRACRSSVMIGTALSKQQMTSIIRHMG 823
Query: 371 RIDQPW 376
+ +PW
Sbjct: 824 TMQEPW 829
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 2 KLVNEVYHQFNN-HQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVK 54
+ +N+VY + YP I+ + + D+ D+N++PDKR IF+ E+ +K
Sbjct: 298 RAINDVYKSCGSASSYPVIVADFSLPTDTYDLNLSPDKRTIFLHSEQAFTDALK 351
>gi|344229018|gb|EGV60904.1| DNA mismatch repair protein MutL [Candida tenuis ATCC 10573]
Length = 624
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 116/381 (30%), Positives = 187/381 (49%), Gaps = 65/381 (17%)
Query: 1 MKLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
MKL+NEVY+QFNN Q+P ILN+ + DS+DVN+ PDK +I
Sbjct: 276 MKLINEVYNQFNNLQFPVFILNV-LINDSIDVNLNPDKTRI------------------- 315
Query: 61 YAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQ 120
F+ D N Q E ++ SE +E + + PS+D H+
Sbjct: 316 ---NFSQDLNEFRQ------------ELVRFWESENMEQQLVLKPSKDPKPQDHKP---- 356
Query: 121 SPETVEPD-TPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRC 179
P+ + P E P+ + T +L + + + Y R +
Sbjct: 357 KPDIISTKRIPIELSAPKPKKPKFANYMNEEIFKTQNL---KTTVNSHYIRLKSHKKG-V 412
Query: 180 VENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHAT 239
V + + P + E E++ + K F +M+++GQFNLGFI+ + +LFI+DQHA+
Sbjct: 413 VSLKSKDDTHPGDERLVEKEIS--VSKLQFNQMQLIGQFNLGFILTRLQDNLFIVDQHAS 470
Query: 240 DEKYNFETLQKTTLIKSQKLV--VPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDG 297
DEKYN+E L+ ++SQ+L+ +P NL+L +I + L + + + NGF+ + D+
Sbjct: 471 DEKYNYEDLKNKFRVQSQQLITPIPLNLNLVEIQK--LSEFINLVENNGFKVNDDNQ--- 525
Query: 298 NVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRP--SRIRAMFASRACRKSVMIGR 355
+T LP KN +ED+ ELL L C P +I ++ A +ACRKS MIG+
Sbjct: 526 ---ITHLPTYKNIQFDKEDLVELLSQLP-------CHPILPKINSVLAMKACRKSTMIGQ 575
Query: 356 ALSVGEMTGLVRNMGRIDQPW 376
L+V M ++ ++ +D+PW
Sbjct: 576 HLNVHTMKKILSHLSELDKPW 596
>gi|213405255|ref|XP_002173399.1| DNA mismatch repair protein pms1 [Schizosaccharomyces japonicus
yFS275]
gi|212001446|gb|EEB07106.1| DNA mismatch repair protein pms1 [Schizosaccharomyces japonicus
yFS275]
Length = 800
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 134/234 (57%), Gaps = 9/234 (3%)
Query: 147 YRQSTPVTLSLDIIQDQLKA--RYARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVI 204
+ ++T T++L ++D+ + +Y T + + H D AE L+ I
Sbjct: 545 FMKTTSKTVNLSELKDRFQTLKKYNSFTSAGSGKATLDTIHDITD----THAEEHLDLSI 600
Query: 205 KKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQN 264
KS F M+I+GQFN GFIIV++ +LFIIDQHA+DEKYN+E L++ ++ +Q LV P+
Sbjct: 601 HKSDFLCMRIIGQFNCGFIIVRHAQNLFIIDQHASDEKYNYEKLKRNCVLSAQDLVAPKQ 660
Query: 265 LHLTKINQCILKDNLPVFYKNGFEFSFDSSD--DGNVLLTSLPMSKNTTLGREDIEELLF 322
L+L + L D+LP+ K GF + D + L S+P S +T D+ E+L
Sbjct: 661 LNLAVNEELALLDHLPIIEKKGFRVTVDETAPIGKRCKLVSVPSSSHTIFDVSDLLEMLG 720
Query: 323 MLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+L E S+I M A +ACR+S+M+GR+L++ EMT +VR++ + +PW
Sbjct: 721 LLVDHPEMEPSS-SKIEKMLAMKACRRSIMVGRSLTISEMTSVVRHLATLSKPW 773
>gi|150865337|ref|XP_001384508.2| hypothetical protein PICST_58454 [Scheffersomyces stipitis CBS
6054]
gi|149386593|gb|ABN66479.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 809
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 119/180 (66%), Gaps = 3/180 (1%)
Query: 200 LNRVIKKSMFEKMKIVGQFNLGFIIVKYD-SDLFIIDQHATDEKYNFETLQKTTLIKSQK 258
L+ I + F KMK++GQFNLGFI+V D ++LFIIDQHA+DEKYNFE L + IK Q+
Sbjct: 603 LSYTISRKDFLKMKLIGQFNLGFILVTLDDNNLFIIDQHASDEKYNFERLNQELSIKIQR 662
Query: 259 LVVPQNLHLTKINQCILKDNLPVFYKNGFEFS--FDSSDDGNVLLTSLPMSKNTTLGRED 316
L+VPQ + L+ I++ ++ ++ +F NG++F+ ++ + L ++P S+ D
Sbjct: 663 LIVPQTIELSIIDELLVIEHEQIFMSNGYQFTVVLEAKPGSRIRLNTMPSSRGVVFDLND 722
Query: 317 IEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+EL+ ++ ++ + S+IR + A RACR S+MIG+ L+ G MT +V+N+ ++D+PW
Sbjct: 723 FQELINLVNTNPRNKNLKCSKIRNLLAMRACRSSIMIGQPLTRGRMTKVVQNLSQLDKPW 782
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 64/120 (53%), Gaps = 14/120 (11%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K+VN+VY FN+ QYP ILNI + ++DVN+TPDK I + E+ L +++ + +
Sbjct: 281 KIVNDVYKSFNHMQYPIFILNIAIDPSALDVNLTPDKGMIMIHSEQDLFEKIRLDLIGFF 340
Query: 62 -----AIGFTVDGNNMNQSM----EQDPS-----SDVDMEKIQRSNSEEVEHETIPVPSE 107
I ++ + +N+S E+ PS D D+E I+ ++E+ +I S+
Sbjct: 341 ESQDNVIPRNLERHELNKSTFTKREKKPSVQNIEPDSDIEDIKLPLAKEMGESSIATESD 400
>gi|296812399|ref|XP_002846537.1| DNA mismatch repair protein pms1 [Arthroderma otae CBS 113480]
gi|238841793|gb|EEQ31455.1| DNA mismatch repair protein pms1 [Arthroderma otae CBS 113480]
Length = 1013
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 116/369 (31%), Positives = 181/369 (49%), Gaps = 84/369 (22%)
Query: 74 QSMEQD---PSSDVDMEKI---QRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETV-E 126
Q+M D P+SD D + +R + E+ + + +E+ S E +++++ V +
Sbjct: 609 QTMPGDIDSPASDSDESYVDDEERKSREDAKVNELIRAAEEASAVPSEQSIERAERLVRK 668
Query: 127 PDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHA 186
P D T E+I V S+ I+ QLKA R +Q+ R +
Sbjct: 669 PRKKDSTHELI-------------CTVDTSIAKIESQLKA--LRERIQS---LHGERITS 710
Query: 187 NIDPSKNKE----AESELNRVIKKSMFEKMKIVGQFNLGFIIV----------------- 225
++D ++ + E++L+ + K+ F KM+I+GQFNLGFI+
Sbjct: 711 SVDEVEDGDQQIAPETKLSLAVSKADFSKMRIIGQFNLGFILAIRPGASRGDNSSLAGPS 770
Query: 226 KYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKN 285
+LFIIDQHA+DEKYNFE LQ T +++Q+LV P+ L LT + + ++ +NL KN
Sbjct: 771 AEQDELFIIDQHASDEKYNFERLQAETTVQNQRLVQPKTLDLTAVEEEVIIENLAALEKN 830
Query: 286 GFEFSFDSSDDGNV----LLTSLPMSKNTTLGREDIEELLFMLQHT-------------- 327
GF D+S D + L SLP+SK D+EEL+ +L
Sbjct: 831 GFIVEIDTSGDEPIGRRCKLISLPLSKEVVFNTRDLEELIVLLSEAPQQSQNHHGKRSMN 890
Query: 328 --NS----------------TEHC--RPSRIRAMFASRACRKSVMIGRALSVGEMTGLVR 367
NS ++H RPS++R MFA RACR S+MIG+ L+ +M +V+
Sbjct: 891 EFNSDAEGADIEPPGISSPFSDHLVPRPSKVRKMFAMRACRSSIMIGKNLTHRQMESVVK 950
Query: 368 NMGRIDQPW 376
+MG ID+PW
Sbjct: 951 HMGTIDKPW 959
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 34/60 (56%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K NEVY FN Q PFI N EM + DVNV+PDKR I + L+ +K +T+ +
Sbjct: 254 KAFNEVYKSFNLSQSPFIFANFEMDTAAYDVNVSPDKRTIMLHDAGALIECLKASLTELF 313
>gi|297809903|ref|XP_002872835.1| hypothetical protein ARALYDRAFT_490319 [Arabidopsis lyrata subsp.
lyrata]
gi|297318672|gb|EFH49094.1| hypothetical protein ARALYDRAFT_490319 [Arabidopsis lyrata subsp.
lyrata]
Length = 923
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 80/195 (41%), Positives = 116/195 (59%), Gaps = 14/195 (7%)
Query: 196 AESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIK 255
A SEL R+ +K F +M+++GQFNLGFII K + DLFI+DQHA DEK+NFE L ++T++
Sbjct: 693 ATSELERLFRKEDFRRMQVLGQFNLGFIIAKLERDLFIVDQHAADEKFNFEHLARSTVLN 752
Query: 256 SQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGN--VLLTSLPMSKNTTLG 313
Q L+ P NL L+ + + ++ + +NGF + S L ++P SKN T G
Sbjct: 753 QQPLLQPLNLELSPEEEVTVLMHMDIIRENGFLLEENPSAPAGKHFRLRAVPYSKNITFG 812
Query: 314 REDIEELLFMLQ------------HTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGE 361
ED+++L+ L T+ T+ PSR+RAM ASRACR SVMIG L E
Sbjct: 813 VEDLKDLISTLGDNHGECSGVSSYKTSKTDSICPSRVRAMLASRACRSSVMIGDPLRKNE 872
Query: 362 MTGLVRNMGRIDQPW 376
M +V ++ ++ PW
Sbjct: 873 MQKIVEHLADLESPW 887
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 39/61 (63%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
KLVNE+Y ++ +YP IL+ + + D+NVTPDKR++F E ++ +++ + + Y
Sbjct: 289 KLVNELYKDTSSRKYPVAILDFVVPGGACDLNVTPDKRKVFFSDENSVIGSLREGLNEIY 348
Query: 62 A 62
+
Sbjct: 349 S 349
>gi|18411951|ref|NP_567236.1| DNA mismatch repair protein PMS2 [Arabidopsis thaliana]
gi|15617225|gb|AAL01156.1| DNA mismatch repair protein [Arabidopsis thaliana]
gi|332656775|gb|AEE82175.1| DNA mismatch repair protein PMS2 [Arabidopsis thaliana]
Length = 923
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 80/195 (41%), Positives = 118/195 (60%), Gaps = 14/195 (7%)
Query: 196 AESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIK 255
A SEL R+ +K F +M+++GQFNLGFII K + DLFI+DQHA DEK+NFE L ++T++
Sbjct: 689 ATSELERLFRKEDFRRMQVLGQFNLGFIIAKLERDLFIVDQHAADEKFNFEHLARSTVLN 748
Query: 256 SQKLVVPQNLHLTKINQCILKDNLPVFYKNGF--EFSFDSSDDGNVLLTSLPMSKNTTLG 313
Q L+ P NL L+ + + ++ + +NGF E + + + L ++P SKN T G
Sbjct: 749 QQPLLQPLNLELSPEEEVTVLMHMDIIRENGFLLEENPSAPPGKHFRLRAIPYSKNITFG 808
Query: 314 REDIEELLFMLQ------------HTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGE 361
ED+++L+ L T+ T+ PSR+RAM ASRACR SVMIG L E
Sbjct: 809 VEDLKDLISTLGDNHGECSVASSYKTSKTDSICPSRVRAMLASRACRSSVMIGDPLRKNE 868
Query: 362 MTGLVRNMGRIDQPW 376
M +V ++ ++ PW
Sbjct: 869 MQKIVEHLADLESPW 883
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 39/61 (63%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
KLVNE+Y ++ +YP IL+ + + D+NVTPDKR++F E ++ +++ + + Y
Sbjct: 289 KLVNELYKDTSSRKYPVTILDFIVPGGACDLNVTPDKRKVFFSDETSVIGSLREGLNEIY 348
Query: 62 A 62
+
Sbjct: 349 S 349
>gi|68491028|ref|XP_710686.1| hypothetical protein CaO19.1605 [Candida albicans SC5314]
gi|68491047|ref|XP_710677.1| hypothetical protein CaO19.9173 [Candida albicans SC5314]
gi|46431910|gb|EAK91429.1| hypothetical protein CaO19.9173 [Candida albicans SC5314]
gi|46431920|gb|EAK91438.1| hypothetical protein CaO19.1605 [Candida albicans SC5314]
Length = 776
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 114/178 (64%), Gaps = 5/178 (2%)
Query: 204 IKKSMFEKMKIVGQFNLGFIIVKYD--SDLFIIDQHATDEKYNFETLQKTTLIKSQKLVV 261
I K F KMK++GQFNLGFIIV +D ++LFIIDQHA+DEKYNFE L + I Q L+
Sbjct: 558 INKQDFLKMKLIGQFNLGFIIVDFDDNNNLFIIDQHASDEKYNFEKLMASFKINYQLLIK 617
Query: 262 PQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSD-DGNVLLTSLPMSKNTTLGREDIEEL 320
P L L+ I+Q ++ DN +F+ NGF+ +S+ D +LL +LP+ +N T +D EL
Sbjct: 618 PIKLELSVIDQMLVIDNQEIFHNNGFKLKINSTPVDNEILLLTLPIYQNITFNLDDFNEL 677
Query: 321 LFML--QHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
L ++ Q + + S+I+ + A +ACR S+MIG LS +M ++ N+ +D+PW
Sbjct: 678 LNLVSQQQDQVNPNLKCSKIKKILAMKACRSSIMIGTFLSKSKMREIISNLSTLDKPW 735
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 43/66 (65%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
KL+NE+Y +N+ QYP I++I ++ + VD+N+ PDK + + E +L T++ +++ +
Sbjct: 153 KLINEIYKSYNHVQYPIYIIDIVINPNLVDINLLPDKTNVLIKDETTILQTIETKLSEFF 212
Query: 62 AIGFTV 67
+ T+
Sbjct: 213 EVQDTM 218
>gi|313234381|emb|CBY24580.1| unnamed protein product [Oikopleura dioica]
Length = 832
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/284 (35%), Positives = 153/284 (53%), Gaps = 26/284 (9%)
Query: 108 DNSNFSHEANLQQSPETVEPDTPDETIEVIDDM---------PRLQGSYRQSTPVTLSLD 158
D+ N ++ P P++ E IE I M PR + ++ + +SL+
Sbjct: 538 DSGNTKRIESIDLIPTARLPESVKEGIEEIKKMKIIYDDNSEPRREREHK-GPKIKISLE 596
Query: 159 IIQDQLKARYARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQF 218
I+ K + R Q R F+A + K+AE EL R K F K++++GQF
Sbjct: 597 SIK-AAKEKEERSNTIFQGR----EFYAKFN--DQKKAEDELTRKFSKKDFTKLQVIGQF 649
Query: 219 NLGFIIV---KYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCIL 275
N GFIIV + DLF+IDQHA DEK+NFE L + I SQ LV+ + + L IL
Sbjct: 650 NRGFIIVTVGQLKDDLFLIDQHACDEKFNFERLM-SKKIDSQPLVIGKRMTLNPGEDQIL 708
Query: 276 KDNLPVFYKNGFEFSFDSSD---DGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEH 332
+D + +F K GF+F+F + D + +T++P +TLG ED+ E+LF++ + +
Sbjct: 709 QDKVALFKKYGFDFNFSDPECVRDVSYRMTAVPRVGKSTLGEEDVHEMLFLINEGDF--N 766
Query: 333 CRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+PS+IR + A ACR SVMIG AL +M +++NM +DQPW
Sbjct: 767 PKPSKIRRINAMAACRSSVMIGEALKTYQMERMLKNMSTMDQPW 810
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 34/46 (73%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEK 47
+++N+ + + + +YP ++LNIE+ + +VD+N+ PDKR + + ++K
Sbjct: 276 RIINQEWRKVTSKKYPVVVLNIEVDQSAVDINLAPDKRTVLLQNQK 321
>gi|238883807|gb|EEQ47445.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 910
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 114/178 (64%), Gaps = 5/178 (2%)
Query: 204 IKKSMFEKMKIVGQFNLGFIIVKYD--SDLFIIDQHATDEKYNFETLQKTTLIKSQKLVV 261
I K F KMK++GQFNLGFIIV +D ++LFIIDQHA+DEKYNFE L + I Q L+
Sbjct: 692 INKQDFLKMKLIGQFNLGFIIVDFDDNNNLFIIDQHASDEKYNFEKLMASFKINYQLLIK 751
Query: 262 PQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSD-DGNVLLTSLPMSKNTTLGREDIEEL 320
P L L+ I+Q ++ DN +F+ NGF+ +S+ D +LL +LP+ +N T +D EL
Sbjct: 752 PIKLELSVIDQMLVIDNQEIFHNNGFKLKINSTPVDNEILLLTLPIYQNITFNLDDFNEL 811
Query: 321 LFML--QHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
L ++ Q + + S+I+ + A +ACR S+MIG LS +M ++ N+ +D+PW
Sbjct: 812 LNLVSQQQDQINPNLKCSKIKKILAMKACRSSIMIGTFLSKSKMREIISNLSTLDKPW 869
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 43/66 (65%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
KL+NE+Y +N+ QYP I++I ++ + VD+N+ PDK + + E +L T++ +++ +
Sbjct: 287 KLINEIYKSYNHVQYPIYIIDIVINPNLVDINLLPDKTNVLIKDETTILQTIETKLSEFF 346
Query: 62 AIGFTV 67
+ T+
Sbjct: 347 EVQDTM 352
>gi|255725688|ref|XP_002547773.1| predicted protein [Candida tropicalis MYA-3404]
gi|240135664|gb|EER35218.1| predicted protein [Candida tropicalis MYA-3404]
Length = 789
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/175 (41%), Positives = 114/175 (65%), Gaps = 2/175 (1%)
Query: 204 IKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQ 263
I K F MK++GQFNLGFI+V ++S+LFIIDQHA+DEK+NFE L IK Q L++P
Sbjct: 588 ISKQDFLDMKLIGQFNLGFILVNHNSNLFIIDQHASDEKFNFEKLMSNFQIKHQPLMMPI 647
Query: 264 NLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGN--VLLTSLPMSKNTTLGREDIEELL 321
NL L I++ ++ DN +F NGF+ + + ++ + L SLP+ KN+ +D EL+
Sbjct: 648 NLDLNIIDEMLVLDNQEIFNNNGFKLTINDNNSAGKRISLVSLPVYKNSMFTVDDFHELI 707
Query: 322 FMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
++ + ++ + S+IR + A +ACR S+MIG +L +M +V+N+ +D+PW
Sbjct: 708 NLINEQPNNKNLKISKIRKILAMKACRSSIMIGSSLKKSKMNEIVKNLSTLDKPW 762
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 39/60 (65%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K++NE+Y FN+ QYP I+N+ ++ + +DVN+ PDK I + +E +L ++ + + Y
Sbjct: 285 KIINEIYKSFNHVQYPTFIINLVINPNLIDVNLIPDKTNILIHNESEVLELIREKLLEFY 344
>gi|241952218|ref|XP_002418831.1| DNA mismatch repair protein, putative; postmeiotic segregation
protein, putative [Candida dubliniensis CD36]
gi|223642170|emb|CAX44137.1| DNA mismatch repair protein, putative [Candida dubliniensis CD36]
Length = 911
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/195 (40%), Positives = 119/195 (61%), Gaps = 5/195 (2%)
Query: 187 NIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSD--LFIIDQHATDEKYN 244
N+ P+K ++ E + I K F KMK++GQFNLGFIIV +D++ LFIIDQHA+DEKYN
Sbjct: 669 NLQPNKQQQYEEVESYQINKQDFLKMKLIGQFNLGFIIVDFDNNNNLFIIDQHASDEKYN 728
Query: 245 FETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSS-DDGNVLLTS 303
FE L I Q L+ P L L+ I+Q ++ DN +F+ NGF+ S+ D + L +
Sbjct: 729 FEKLMTNFRINYQSLIKPIKLELSVIDQMLVMDNQEIFHNNGFKLKIKSTLVDNEIFLET 788
Query: 304 LPMSKNTTLGREDIEELLFML--QHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGE 361
LP+ +N +D ELL ++ Q + + S+I+ + A +ACR S+MIG LS +
Sbjct: 789 LPVYQNIIFNLDDFYELLNLVNQQQDQVNPNLKCSKIKQILAMKACRSSIMIGTFLSKSK 848
Query: 362 MTGLVRNMGRIDQPW 376
M ++ N+ +D+PW
Sbjct: 849 MKEIISNLSTLDKPW 863
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 40/62 (64%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
KL+NE+Y +N+ QYP I++I ++ + VD+N+ PDK + + E +L ++ +++ +
Sbjct: 287 KLINEIYKSYNHVQYPIYIIDIVINPNLVDINLLPDKTNVLIKDETTILQIIETKLSEFF 346
Query: 62 AI 63
+
Sbjct: 347 EL 348
>gi|145348213|ref|XP_001418550.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578779|gb|ABO96843.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 829
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/221 (38%), Positives = 117/221 (52%), Gaps = 43/221 (19%)
Query: 199 ELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQK 258
EL RV K+ F KM+IVGQFNLGFI+ DLFI+DQHA+DE YNFE LQ+T+ + Q
Sbjct: 597 ELERVFNKADFAKMRIVGQFNLGFILAVLGDDLFIVDQHASDEIYNFERLQRTSTLTRQP 656
Query: 259 LVVPQNLHLTKINQCILKDNLPVFYKNGFEF---------------SFD-SSDDGNVLLT 302
L+ P L LT + + N+PVF +NGF F S D ++ G + L
Sbjct: 657 LIHPVPLDLTASEEQTVLQNMPVFLQNGFGFCDVAETVPGADMNNSSIDPTARCGALRLN 716
Query: 303 SLPMSKNTTLGREDIEELLFML---QHTNSTEH------------------------CRP 335
++P KN + D++EL+ ML QH+ ++ RP
Sbjct: 717 AVPFLKNVAFDKSDVQELVSMLDQGQHSLPSKSQLSIGLAREDAAAARSRRDASPRVLRP 776
Query: 336 SRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
S+ RA A +ACR S+MIG AL M ++RN+G +D PW
Sbjct: 777 SKTRAALAMKACRSSIMIGDALDARSMRRVLRNLGALDAPW 817
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 43/61 (70%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K++NE Y FN +Q P +L++++ DS DVNVTPDKR++ + E+ LL +K +T+++
Sbjct: 285 KVLNETYRSFNPNQAPMAVLDVQLPTDSYDVNVTPDKRKVMLHQEQELLTKMKEKLTEAF 344
Query: 62 A 62
A
Sbjct: 345 A 345
>gi|328855348|gb|EGG04475.1| hypothetical protein MELLADRAFT_37375 [Melampsora larici-populina
98AG31]
Length = 448
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/216 (38%), Positives = 121/216 (56%), Gaps = 13/216 (6%)
Query: 172 TVQAQDRCVENRFHANIDPSK-------NKEAESELNRVIKKSMFEKMKIVGQFNLGFII 224
T +A ++ +I+P K EAE+ L+R + KS F MKI+GQFNLGFII
Sbjct: 216 TAKAAATVIDLNLELSINPDKVVLKSQLEAEAEAALSRTVHKSDFANMKIIGQFNLGFII 275
Query: 225 VKY-DSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFY 283
V + D+ I+DQHA+DEKYNFE LQ+ T + Q+L+ P+ L L + ++ +
Sbjct: 276 VGLGEEDVLIVDQHASDEKYNFERLQRDTKLSGQRLLTPRTLDLPAAEELTAMEHRDLLE 335
Query: 284 KNGFEFSFD--SSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAM 341
NGF D + V L + P+S++T G + F L RPS+ R M
Sbjct: 336 MNGFGILIDEDAPVGQRVKLVAQPVSRDTIWGPSGMS---FCLCSLTGAPPLRPSKTRKM 392
Query: 342 FASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPWV 377
FASRACR SVMIG +L+ G+M ++ +MG +++PW
Sbjct: 393 FASRACRSSVMIGDSLTTGQMRSILDHMGMMEEPWA 428
>gi|410083405|ref|XP_003959280.1| hypothetical protein KAFR_0J00770 [Kazachstania africana CBS 2517]
gi|372465871|emb|CCF60145.1| hypothetical protein KAFR_0J00770 [Kazachstania africana CBS 2517]
Length = 811
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/233 (38%), Positives = 135/233 (57%), Gaps = 20/233 (8%)
Query: 161 QDQLKARYARRTVQAQDRCVENRFHANIDPSK----NKEAESELNRVIKKSMFEKMKIVG 216
+D++KA + QDR +E + + D S N E E L K F K++++G
Sbjct: 553 EDEIKAESRKFMNLLQDR-IEKNDYDDADRSNALNNNVEDEGYLTFSFSKEDFNKLEVIG 611
Query: 217 QFNLGFIIVKYDS-----DLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKIN 271
QFNLGFI+ S D+FIIDQHA+DEK+NFE L K ++K+QKL+VP L L ++
Sbjct: 612 QFNLGFIVTLKKSSMNKYDMFIIDQHASDEKFNFEKLNKELVLKTQKLIVPIKLELNIVD 671
Query: 272 QCILKDNLPVFYKNGF--EFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNS 329
+ I+ +N +F KNGF E + D+ V L S+P+ KN T ED EL+ +L+ N
Sbjct: 672 ELIVIENADMFNKNGFKIEINDDNEPGKKVQLLSIPIYKNLTFNVEDFHELVDILKEKNG 731
Query: 330 TEH------CRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
T + C S+ +M A +ACR S+MIG+ L+ MT +V+N+ ++ +PW
Sbjct: 732 TSNEDDIKLC--SKTYSMLAMKACRSSIMIGKPLTHKTMTRVVKNLNKLQKPW 782
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 62/108 (57%), Gaps = 13/108 (12%)
Query: 2 KLVNEVY---HQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHIT 58
KL+ E++ H +++YP LN+ ++ +D+N+TPDKR I + +E +++ +K H
Sbjct: 298 KLITEIFKLNHIGQSNKYPMFFLNLNVNESLIDINITPDKRTIMLSNEDVIMGLLK-HEL 356
Query: 59 DSYAIGFTVDGNNMN-----QSMEQDPSSDVDMEKI-QRSNSEEVEHE 100
+ + F +D + +N S+++ D D++++ +RS E+ ++
Sbjct: 357 NKF---FQIDNDKINLSFNTSSLKRPNDEDSDLQRLSKRSTRHELTYD 401
>gi|313212747|emb|CBY36677.1| unnamed protein product [Oikopleura dioica]
Length = 664
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/186 (43%), Positives = 118/186 (63%), Gaps = 7/186 (3%)
Query: 194 KEAESELNRVIKKSMFEKMKIVGQFNLGFIIV---KYDSDLFIIDQHATDEKYNFETLQK 250
K+AE EL R K F K++++GQFN GFIIV + DLF+IDQHA DEK+NFE L
Sbjct: 461 KKAEDELTRKFSKKDFTKLQVIGQFNRGFIIVTVGQLKDDLFLIDQHACDEKFNFERLM- 519
Query: 251 TTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNT 310
+ I SQ LV+ + + L IL+D + +F K GF+F+F S + + +T++P +
Sbjct: 520 SKKIDSQPLVIGKRMTLNPGEDQILQDKVALFKKYGFDFNF-SDPEFSYRMTAVPRVGKS 578
Query: 311 TLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMG 370
TLG ED+ E+LF++ + + +PS+IR + A ACR SVMIG AL +M +++NM
Sbjct: 579 TLGEEDVHEMLFLINEGDF--NPKPSKIRRINAMAACRSSVMIGEALKTYQMERMLKNMS 636
Query: 371 RIDQPW 376
+DQPW
Sbjct: 637 TMDQPW 642
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 34/46 (73%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEK 47
+++N+ + + + +YP ++LNIE+ + +VD+N+ PDKR + + ++K
Sbjct: 166 RIINQEWRKVTSKKYPVVVLNIEVDQSAVDINLAPDKRTVLLQNQK 211
>gi|443691436|gb|ELT93291.1| hypothetical protein CAPTEDRAFT_202090, partial [Capitella teleta]
Length = 134
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/145 (53%), Positives = 94/145 (64%), Gaps = 22/145 (15%)
Query: 218 FNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKD 277
FNLGF+I + + DLFIIDQHA+DEKYNFE LQK T++ SQ+LV PQ L LT N+ IL D
Sbjct: 1 FNLGFVIARLNQDLFIIDQHASDEKYNFEMLQKHTVLSSQRLVCPQILPLTAANEVILMD 60
Query: 278 NLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSR 337
NL +F +NGF F D EDIEEL+FML ++ CRP+R
Sbjct: 61 NLDIFKRNGFAFEVDE---------------------EDIEELVFMLSDSSGI-MCRPTR 98
Query: 338 IRAMFASRACRKSVMIGRALSVGEM 362
+R M ASRACRKS+MIG AL+ EM
Sbjct: 99 VRQMLASRACRKSIMIGTALNQPEM 123
>gi|320592269|gb|EFX04708.1| DNA mismatch repair protein [Grosmannia clavigera kw1407]
Length = 917
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 82/226 (36%), Positives = 119/226 (52%), Gaps = 37/226 (16%)
Query: 188 IDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKY---------------DSDLF 232
+D AE +L I KS F +M++VGQFNLGFI+ D +LF
Sbjct: 642 LDEGNATAAEEKLALTIAKSDFGQMRVVGQFNLGFILAVRRGGREEEEGRSRRLDDDELF 701
Query: 233 IIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFD 292
IIDQHA+DEKYNFE L+ TT ++SQ+LV P+ L LT + + ++ ++ V NGF
Sbjct: 702 IIDQHASDEKYNFERLRATTTLQSQRLVQPKRLSLTAVEEEVVFESRAVLAANGFVVDVV 761
Query: 293 SSD----DGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHC--------------- 333
L +LP+S+ TT D+EEL+ +L +
Sbjct: 762 VDGSEPVGARCRLLTLPLSRETTFDLGDLEELIALLAEHPGAAYADNLDCLDLSLSLSST 821
Query: 334 ---RPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
RP+++R M A RACR S+M+GRALS +M ++ +MG +D+PW
Sbjct: 822 PIPRPAKVRRMLAMRACRSSIMVGRALSHRQMAAVLAHMGHMDKPW 867
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFM-DHEKLL 49
+L EVY +N Q PFI +I++ DVNV+PDK+ I + D K+L
Sbjct: 292 QLFGEVYRTYNTSQAPFIFADIQLDTHLYDVNVSPDKQTILLHDQGKML 340
>gi|315050860|ref|XP_003174804.1| DNA mismatch repair protein pms1 [Arthroderma gypseum CBS 118893]
gi|311340119|gb|EFQ99321.1| DNA mismatch repair protein pms1 [Arthroderma gypseum CBS 118893]
Length = 1039
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/235 (35%), Positives = 119/235 (50%), Gaps = 55/235 (23%)
Query: 197 ESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDS------------------DLFIIDQHA 238
E++L+ + K F +M+I+GQFNLGFI+ +LFIIDQHA
Sbjct: 751 ETKLSLAVSKKDFSRMRIIGQFNLGFILATRPGGSPDSTRSSARPAGNEQDELFIIDQHA 810
Query: 239 TDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGN 298
+DEKYNFE LQ T +++Q+LV P+ L LT + + ++ DNL KNGF D+S D
Sbjct: 811 SDEKYNFERLQAETTVQNQRLVKPKTLDLTSVEEEVIIDNLAALEKNGFIVEIDTSGDEP 870
Query: 299 V----LLTSLPMSKNTTLGREDIEELLFMLQHTNSTEH---------------------- 332
+ L SLP+SK D+EEL+ +L
Sbjct: 871 IGRRCKLISLPLSKEVVFDTRDLEELIVLLSEAPQQSQNNRGKRSRNELDSDAEDVEPSG 930
Query: 333 -----------CRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
RPS++R MFA RACR S+MIG+ L+ +M +V++MG ID+PW
Sbjct: 931 IASSPFSDYLVPRPSKVRKMFAMRACRSSIMIGKNLTHRQMETVVKHMGTIDKPW 985
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 35/60 (58%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K NEVY FN Q PFI N EM + DVNV+PDKR I + L+ ++K +T+ +
Sbjct: 273 KAFNEVYKSFNLSQSPFIFANFEMDTSAYDVNVSPDKRTILLHDAGALIESLKASLTELF 332
>gi|344302629|gb|EGW32903.1| hypothetical protein SPAPADRAFT_150269 [Spathaspora passalidarum
NRRL Y-27907]
Length = 836
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 111/176 (63%), Gaps = 3/176 (1%)
Query: 204 IKKSMFEKMKIVGQFNLGFIIVKY-DSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVP 262
IKKS F +M ++GQFNLGFI+V + DS++FIIDQHA+DEKYNFE L + IK+Q L+VP
Sbjct: 634 IKKSDFSEMSLIGQFNLGFILVNHQDSNIFIIDQHASDEKYNFEKLVREFQIKTQPLIVP 693
Query: 263 QNLHLTKINQCILKDNLPVFYKNGFEFSF--DSSDDGNVLLTSLPMSKNTTLGREDIEEL 320
Q L L +++ ++ ++ +F NGF DS + + SLP K T +D EL
Sbjct: 694 QQLELNIVDEMLIIEHESIFINNGFRLKINHDSLPGTRISMLSLPTYKGTIFSLDDFYEL 753
Query: 321 LFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+ ++ + S+IR + A +ACR S+MIG +L+ +MT +V N+ +D+PW
Sbjct: 754 INLINEQPGNTAVKCSKIRKLLAMKACRTSIMIGSSLTSKKMTEIVENLSTLDKPW 809
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
KL+NEVY FNN QYP ++N+E+ D D+N+TPDK I + E +L ++ + + Y
Sbjct: 282 KLINEVYKSFNNVQYPIFVINLEIQSDKFDINLTPDKSMILLHKESEILQLIREKLIEFY 341
>gi|66810241|ref|XP_638844.1| MutL DNA mismatch repair protein [Dictyostelium discoideum AX4]
gi|74854421|sp|Q54QA0.1|PMS1_DICDI RecName: Full=Mismatch repair endonuclease pms1
gi|60467455|gb|EAL65478.1| MutL DNA mismatch repair protein [Dictyostelium discoideum AX4]
Length = 1022
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 118/190 (62%), Gaps = 6/190 (3%)
Query: 194 KEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKT-- 251
K AE EL + KK F++M ++GQFNLGFII K +DLFIIDQHA DEKYNFE L K+
Sbjct: 796 KTAEEELTKFFKKEYFKQMIVIGQFNLGFIIAKLGNDLFIIDQHAADEKYNFEILSKSVE 855
Query: 252 TLIKSQKLVVPQNLH-LTKINQCILKDNLPVFYKNGFEF--SFDSSDDGNVLLTSLPMSK 308
+ I SQ L+ P L LT + I+ +N+ +F KNGF+F D+ + L++ P+
Sbjct: 856 SSINSQPLLKPDTLSDLTSEEELIIIENVDLFKKNGFKFIIDHDAPTRFKIKLSAFPIIH 915
Query: 309 NTTLGREDIEELLFMLQHTNSTEHC-RPSRIRAMFASRACRKSVMIGRALSVGEMTGLVR 367
+ G +DI E +FM++ ++ + R+ ++ AS+ACRKS+M+G L+ EM ++
Sbjct: 916 GQSFGIKDIYEWIFMIKESSIPGSVNKIPRLNSLLASKACRKSIMVGTTLTHKEMKDVLN 975
Query: 368 NMGRIDQPWV 377
N+ +D PW
Sbjct: 976 NLSTLDNPWC 985
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 2 KLVNEVYHQFNNH-QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATV 53
K +N +Y F+ YP +I NIEM ++ DVNVTPDKR IF+ E+ LL +
Sbjct: 313 KEINSLYQSFHKRGSYPVVIFNIEMPTNNYDVNVTPDKRTIFIQKEQQLLLLI 365
>gi|413922861|gb|AFW62793.1| hypothetical protein ZEAMMB73_370746 [Zea mays]
Length = 205
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 77/177 (43%), Positives = 108/177 (61%), Gaps = 14/177 (7%)
Query: 214 IVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQC 273
+VGQFNLGFII K DLFI+DQHA+DEKYNFE L ++T++ Q L+ P L L+ +
Sbjct: 2 VVGQFNLGFIIGKLGQDLFIVDQHASDEKYNFECLSQSTILNVQPLLEPLRLDLSPEEEV 61
Query: 274 ILKDNLPVFYKNGFEFSFD--SSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHT---- 327
I+ N+ KNGF + D +S + LL ++P SKN T G +D++EL+ ML +
Sbjct: 62 IVSMNMSTIRKNGFVLAEDLHASPGNHYLLKAVPFSKNITFGVQDVKELISMLADSQGDC 121
Query: 328 --------NSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
++ + PSR+RAM ASRACR S MIG L+ EM +++NM + PW
Sbjct: 122 SIISSYKLDTADSVCPSRVRAMLASRACRMSTMIGDPLTKAEMKKILKNMAGLRSPW 178
>gi|168067130|ref|XP_001785478.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662920|gb|EDQ49719.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 742
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 82/203 (40%), Positives = 120/203 (59%), Gaps = 29/203 (14%)
Query: 198 SELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQ 257
S LNR S+ +K +VGQFNLGF++ K D DLFI+DQHA+DEKYNFE L K+T++ Q
Sbjct: 524 SPLNR----SIVDKA-VVGQFNLGFVLAKLDQDLFIVDQHASDEKYNFERLTKSTILNKQ 578
Query: 258 KLVVPQNLHLTKINQCILKDNLPVFYKNGFEF--SFDSSDDGNVLLTSLPMSKNTTLGRE 315
L+ P +L L+ + I+ ++ F +NGF+F + D+ + L+++P S+N T G
Sbjct: 579 PLLRPLSLELSAAEEVIVTTHIETFRQNGFDFVENEDAPLGSRLSLSAVPFSQNITFGIG 638
Query: 316 DIEELLFMLQH----------TNST------------EHCRPSRIRAMFASRACRKSVMI 353
D++EL+ +L + TN T RPSR+R M ASRACR S+MI
Sbjct: 639 DVQELVGILANGTAPVAKPSTTNGTGSQNGSQKGGLLSAIRPSRVRGMLASRACRSSIMI 698
Query: 354 GRALSVGEMTGLVRNMGRIDQPW 376
G AL EM ++ ++ +D PW
Sbjct: 699 GDALCKKEMEKILCHLADLDAPW 721
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 49/91 (53%), Gaps = 7/91 (7%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVK-----VH 56
KL+NE+Y FN+ Q P LN ++ + DVNVTPDKR++F+ E LL +K V+
Sbjct: 273 KLLNELYGSFNSLQKPMAFLNFILTPTAYDVNVTPDKRKVFLHTESALLTALKEALECVY 332
Query: 57 ITDSYAIGFTVDGNNMNQSMEQDPSSDVDME 87
D Y +TV+ + Q S VD E
Sbjct: 333 TPDKYT--YTVNNFADKATSSQHGVSIVDFE 361
>gi|19115329|ref|NP_594417.1| MutL family mismatch-repair protein Pms1 [Schizosaccharomyces pombe
972h-]
gi|1709684|sp|P54280.1|PMS1_SCHPO RecName: Full=DNA mismatch repair protein pms1
gi|1246854|emb|CAA65400.1| pms1 [Schizosaccharomyces pombe]
gi|2239195|emb|CAB10113.1| MutL family mismatch-repair protein Pms1 [Schizosaccharomyces
pombe]
Length = 794
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 117/186 (62%), Gaps = 11/186 (5%)
Query: 197 ESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKS 256
E LN + K+ F +M++VGQFN GFI+V + ++LFIIDQHA+DEK+N+E L+ +I S
Sbjct: 596 EDHLNLTVHKADFLRMRVVGQFNRGFIVVVHGNNLFIIDQHASDEKFNYEHLKSNLVINS 655
Query: 257 QKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDD-GN-VLLTSLPMSKNTTLGR 314
Q LV+P+ L L + +L D++ + + GF + D + GN L S+P SKN
Sbjct: 656 QDLVLPKRLDLAATEETVLIDHIDLIRRKGFGVAIDLNQRVGNRCTLLSVPTSKNVIFDT 715
Query: 315 EDIEELLFMLQHTNSTEHCR----PSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMG 370
D+ E++ +L +EH + SR+ M AS+ACR SVMIGRAL++ EM +VR++
Sbjct: 716 SDLLEIISVL-----SEHPQIDPFSSRLERMLASKACRSSVMIGRALTISEMNTIVRHLA 770
Query: 371 RIDQPW 376
+ +PW
Sbjct: 771 ELSKPW 776
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 35/53 (66%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVK 54
+++ EV+ ++ Q PF +N+ ++ ++D+NV+PDK+ +F+ E ++ +K
Sbjct: 272 RVIQEVFKPYSMAQSPFFAINLRITNGTIDINVSPDKKSVFLSEEDSIIEFIK 324
>gi|149240297|ref|XP_001526024.1| hypothetical protein LELG_02582 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450147|gb|EDK44403.1| hypothetical protein LELG_02582 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 948
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 111/175 (63%), Gaps = 2/175 (1%)
Query: 204 IKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQ 263
IKK+ F MK++GQFNLGFI+V + S+LFIIDQHA+DEK+NFE L +T + Q L+ P
Sbjct: 747 IKKTDFLDMKLIGQFNLGFILVCHGSNLFIIDQHASDEKFNFERLLETFAVNYQPLITPL 806
Query: 264 NLHLTKINQCILKDNLPVFYKNGFEFS--FDSSDDGNVLLTSLPMSKNTTLGREDIEELL 321
+ L I++ ++ D+ +F NGF+ S +D + LTSLP+ KN +D EL+
Sbjct: 807 FVDLNVIDEMLVLDHEQIFQNNGFKISVDYDKPAGAKISLTSLPVYKNIMFSVDDFYELI 866
Query: 322 FMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
++ S + + S+IR + A +ACR S+MIG LS M +V N+ ++D+PW
Sbjct: 867 NLINEQPSNRNIKCSKIRKIVAMKACRSSIMIGSFLSKQRMQKVVANLSKLDKPW 921
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 40/60 (66%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K++NE+Y FN+ Q+P ILN++++ +++DVN+ PDK + + +E +L ++ + Y
Sbjct: 282 KIINEIYKSFNHVQFPVYILNLDINPEAIDVNLLPDKTSVLVHNEDKVLELIRESLITFY 341
>gi|398390628|ref|XP_003848774.1| hypothetical protein MYCGRDRAFT_48403 [Zymoseptoria tritici IPO323]
gi|339468650|gb|EGP83750.1| hypothetical protein MYCGRDRAFT_48403 [Zymoseptoria tritici IPO323]
Length = 1039
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/199 (43%), Positives = 124/199 (62%), Gaps = 17/199 (8%)
Query: 195 EAESELNRVIKKSMFEKMKIVGQFNLGFIIV-------KYDSDLFIIDQHATDEKYNFET 247
EAE L+ + KS F +M+IVGQFNLGF++ + + DLFIIDQHA DEKYN+E
Sbjct: 786 EAEDRLSLTVSKSDFARMRIVGQFNLGFVLALRSGGGDREEDDLFIIDQHAADEKYNYER 845
Query: 248 LQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDS--SDDGNVL----- 300
LQ+T ++SQ+LV P+ L LT + Q I+ ++ NGF+ S ++G+ +
Sbjct: 846 LQRTVTLQSQRLVRPKVLELTAVEQEIIINHSDALKANGFDIESSSHLDEEGDEVGTREC 905
Query: 301 -LTSLPMSKNTTLGREDIEELLFMLQH--TNSTEHCRPSRIRAMFASRACRKSVMIGRAL 357
L +LPMSK T D+EELL +L TNS E RP +++ M A RACR S+M+GR L
Sbjct: 906 RLLTLPMSKEKTFDLSDLEELLHLLSEAPTNSAEIPRPKKVQKMLAMRACRSSIMVGRTL 965
Query: 358 SVGEMTGLVRNMGRIDQPW 376
+ +M +V +MG +++PW
Sbjct: 966 TEAQMRKVVVHMGEMEKPW 984
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K NEVY FN Q PF+ N+ M ++ DVNV+PDKR I + + LL ++K + +
Sbjct: 300 KAFNEVYKSFNVSQSPFVFANLIMDTNAYDVNVSPDKRTIMLHDQTALLESLKASLAGLF 359
>gi|224131150|ref|XP_002321013.1| predicted protein [Populus trichocarpa]
gi|222861786|gb|EEE99328.1| predicted protein [Populus trichocarpa]
Length = 915
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/195 (42%), Positives = 116/195 (59%), Gaps = 14/195 (7%)
Query: 196 AESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIK 255
A +EL R+ +K F +MK++GQFNLGFII K D DLFI+DQHA DEKYNFE L ++T++
Sbjct: 692 ATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLCQSTILN 751
Query: 256 SQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFD--SSDDGNVLLTSLPMSKNTTLG 313
Q L+ P L L+ + + NL + KNGF D + + L ++P SKN T G
Sbjct: 752 QQPLLRPLRLELSPEEEVVASMNLDIIRKNGFALEEDPHALPGHHFKLKAVPFSKNITFG 811
Query: 314 REDIEELLFMLQHT------------NSTEHCRPSRIRAMFASRACRKSVMIGRALSVGE 361
ED+++L+ L + ++ + PSR+ AMFASRACR SVMIG AL E
Sbjct: 812 VEDVKDLISTLADSQGECSIISRYKMDTADSVCPSRVHAMFASRACRSSVMIGDALGRNE 871
Query: 362 MTGLVRNMGRIDQPW 376
M ++ ++ + PW
Sbjct: 872 MQKILEHLVDLKSPW 886
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFM-DHEKLLLA 51
KLVNE+Y N+ QYP I+N + + DVNVTPDKR+IF D +LLA
Sbjct: 280 KLVNELYKGANSRQYPIAIMNFTIPTTACDVNVTPDKRKIFFSDESSILLA 330
>gi|330800737|ref|XP_003288390.1| hypothetical protein DICPUDRAFT_152626 [Dictyostelium purpureum]
gi|325081572|gb|EGC35083.1| hypothetical protein DICPUDRAFT_152626 [Dictyostelium purpureum]
Length = 956
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 115/186 (61%), Gaps = 4/186 (2%)
Query: 196 AESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIK 255
AE EL + KK F++M ++GQFNLGFII K +DLFIIDQHA DEKYNFE L K+ I
Sbjct: 736 AELELTKYFKKEYFKQMIVIGQFNLGFIIAKLGNDLFIIDQHAADEKYNFEMLSKSLEIS 795
Query: 256 SQKLVVPQNLH-LTKINQCILKDNLPVFYKNGFEFSFD--SSDDGNVLLTSLPMSKNTTL 312
SQ L+ P L LT + I+ +N+ +F KNGF+F D + + L++ PM T
Sbjct: 796 SQPLIKPDPLSDLTCEEEMIIIENIDLFKKNGFKFIIDPEAPPRNKIQLSAFPMIHGQTF 855
Query: 313 GREDIEELLFMLQHTN-STEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGR 371
G +D+ EL+++L+ + + R+ + AS+ACRKS+M+G +L EM ++ N+
Sbjct: 856 GIKDVYELIYLLKESPIPGSVTKIPRLNTLLASKACRKSIMVGNSLCHKEMKDVLNNLST 915
Query: 372 IDQPWV 377
+D PW
Sbjct: 916 LDNPWC 921
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 2 KLVNEVYHQFNNH-QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATV 53
K +N +YHQF+ YP ++ NIE D+ DVNVTPDKR IF+ E LL +
Sbjct: 297 KEINTLYHQFHKRGAYPVVVFNIETPTDNYDVNVTPDKRTIFIQKESQLLLLI 349
>gi|412993378|emb|CCO16911.1| predicted protein [Bathycoccus prasinos]
Length = 906
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 114/219 (52%), Gaps = 35/219 (15%)
Query: 193 NKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYD-SDLFIIDQHATDEKYNFETLQKT 251
N A + L R KS F +++VGQFNLGFIIV D +D+FI+DQHA+DE YNFE LQKT
Sbjct: 673 NAAATNALIRRFDKSEFANVRVVGQFNLGFIIVVRDNTDIFIVDQHASDEIYNFERLQKT 732
Query: 252 TLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFS----------FDSSDDGNVLL 301
T + Q L+ PQ L L+ + I + N F NGF F D S + L
Sbjct: 733 TTLNKQPLIQPQRLELSPAEEQIARSNEKTFLMNGFGFCDVATSPPNFPGDESSSSRLAL 792
Query: 302 TSLPMSKNTTLGREDIEELLFMLQHT----------------NSTEHC--------RPSR 337
++P SK+T D+ EL+ ML NS RPS+
Sbjct: 793 AAVPFSKDTVFDASDVHELVAMLDEGEYAVPVRSQLSVGLLKNSAADAGGSTKTVLRPSK 852
Query: 338 IRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+R M A RACR S+MIG+ LS M +++N+ +++PW
Sbjct: 853 VRNMLAMRACRSSIMIGQPLSRRRMKKILQNLSALERPW 891
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
Query: 2 KLVNEVYHQFN----NHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHI 57
K +NE + +N N YP LN E+ + VDVNV+PDKR + +E +L + I
Sbjct: 325 KTLNETFRAYNATTTNANYPSCALNFEVPKHLVDVNVSPDKRTVMFTNEHDILMYFRNGI 384
Query: 58 TDSY--AIGFTVDGNNMNQSMEQDPSSDVDMEKI 89
++ A+G + + + + ++ VD+ ++
Sbjct: 385 KKAFERAVGGNGERGSADGLVRNFRATGVDLSQL 418
>gi|297287878|ref|XP_002808391.1| PREDICTED: LOW QUALITY PROTEIN: mismatch repair endonuclease
PMS2-like, partial [Macaca mulatta]
Length = 539
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 76/173 (43%), Positives = 102/173 (58%), Gaps = 31/173 (17%)
Query: 206 KSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNL 265
K+MF +M+I+GQFNLGFII K + + L +PQ L
Sbjct: 375 KTMFAEMEIIGQFNLGFIITKLN----------------------------EGLALPQTL 406
Query: 266 HLTKINQCILKDNLPVFYKNGFEFSFDSSD--DGNVLLTSLPMSKNTTLGREDIEELLFM 323
+LT +N+ +L +NL +F KNGF+F D + L SLP SKN T G +DI+EL+F+
Sbjct: 407 NLTAVNEAVLIENLEIFRKNGFDFVIDENAPVTERAKLISLPTSKNWTFGPQDIDELIFL 466
Query: 324 LQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
L + CRPSR++ MFASRACRKSVMIG AL+ EM L+ +MG +D PW
Sbjct: 467 LSDSPGV-MCRPSRVKQMFASRACRKSVMIGTALNTSEMKKLITHMGEMDHPW 518
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 68/153 (44%), Gaps = 16/153 (10%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQ--IFMDHEKLLLATVK----- 54
+LVNEVYH +N HQYPF++LNI S DS DV VT + Q + E L+ + K
Sbjct: 322 RLVNEVYHMYNRHQYPFVVLNI--SVDS-DVEVTQQRAQGSSWQRLEGLISSIGKSKTMF 378
Query: 55 --VHITDSYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNF 112
+ I + +GF + N ++ Q + E + N E ++N+
Sbjct: 379 AEMEIIGQFNLGFIITKLNEGLALPQTLNLTAVNEAVLIENLEIFRKNGFDFVIDENAPV 438
Query: 113 SHEANLQQSPE----TVEPDTPDETIEVIDDMP 141
+ A L P T P DE I ++ D P
Sbjct: 439 TERAKLISLPTSKNWTFGPQDIDELIFLLSDSP 471
>gi|224012369|ref|XP_002294837.1| hypothetical protein THAPSDRAFT_264783 [Thalassiosira pseudonana
CCMP1335]
gi|220969276|gb|EED87617.1| hypothetical protein THAPSDRAFT_264783 [Thalassiosira pseudonana
CCMP1335]
Length = 919
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 85/214 (39%), Positives = 122/214 (57%), Gaps = 20/214 (9%)
Query: 181 ENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKY-DSDLFIIDQHAT 239
E + N +P + ++++S +N + K F +M I+GQFNLGFI+ + D +LFI+DQHA
Sbjct: 682 ERQQKTNREPQRAQDSDSTVN--LSKEDFLRMSIIGQFNLGFILARTPDHNLFILDQHAC 739
Query: 240 DEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDG-- 297
DEKYNFE L K T+I QKL+ P L L+ + + D++ VF +NGF FS+D +
Sbjct: 740 DEKYNFERLFKETVIHEQKLIAPLPLELSPSEEHCVLDHMEVFERNGFRFSYDPDKEPRH 799
Query: 298 NVLLTSLPMSKNTTLGREDIEELLFML--------------QHTNSTEHCRPSRIR-AMF 342
+ LT+LP S + G+ED+ L ML S + S I AMF
Sbjct: 800 RLSLTALPHSGSVQFGKEDVGALCAMLGADGTYAGMAGSQEGSIKSVDGILGSSIAIAMF 859
Query: 343 ASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
ASRACR S+MIG ALS E +++ + + D PW
Sbjct: 860 ASRACRGSIMIGTALSHKEQMNILKKLDKTDIPW 893
>gi|302840656|ref|XP_002951883.1| hypothetical protein VOLCADRAFT_61856 [Volvox carteri f.
nagariensis]
gi|300262784|gb|EFJ46988.1| hypothetical protein VOLCADRAFT_61856 [Volvox carteri f.
nagariensis]
Length = 187
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/168 (43%), Positives = 108/168 (64%), Gaps = 9/168 (5%)
Query: 213 KIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLH---LTK 269
+++GQFNLGFI+ ++ D+FI+DQHA EK FE LQ++ ++ Q L+VP L L
Sbjct: 1 QVLGQFNLGFILARHGPDVFIVDQHAAAEKTTFERLQRSVVLTRQPLLVPMALPAGVLLP 60
Query: 270 INQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTT-LGREDIEELLFMLQHTN 328
++Q I+++++ VF +NGF+F D +LL+S+P+S+ T LG ED+ EL+ ML+
Sbjct: 61 VDQLIIREHIDVFRRNGFDFVERLPDGRLLLLSSVPVSRATGQLGMEDVVELVGMLRSGE 120
Query: 329 STEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
IRAM ASRACR SVM+GR L+ GEM L+ + + QPW
Sbjct: 121 GA-----GGIRAMLASRACRSSVMVGRPLNRGEMRRLLDGLADLRQPW 163
>gi|323447423|gb|EGB03344.1| hypothetical protein AURANDRAFT_55567 [Aureococcus anophagefferens]
Length = 690
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 178/385 (46%), Gaps = 18/385 (4%)
Query: 2 KLVNEVYH--QFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITD 59
+ + +V+ + + P +L+I + +VDVNV+PDKR + +D E L+A +++ + D
Sbjct: 288 RCIGDVWRSVEGDRRGRPAFVLDIRVPPSAVDVNVSPDKRDVVLDDETGLVAALRIALHD 347
Query: 60 SY--AIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEAN 117
+ + G G ++ + PS+ D E S + + + +N
Sbjct: 348 LWEPSRGSFAGGRSLAPHVA--PSTTPDTEA-PCSLVLPIAVPSCVTSTATATNAPAREA 404
Query: 118 LQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQD 177
+ P T+ P + + + L + + + +L A T+ Q
Sbjct: 405 MLVVPPTLRPTQRNSDTIAVAQVIALSPWQAARAHIDWNCAVAPARLHASSVFGTLAVQS 464
Query: 178 RCVENRFHANID--PSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIID 235
RC ID P N + + K+ F M+ +GQFNLGF++ + LF++D
Sbjct: 465 RCGHGHRTVQIDRRPGGNVPTAA-----LAKTDFSAMEALGQFNLGFLVCRLGDHLFLVD 519
Query: 236 QHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSF-DSS 294
QHA DEK+ +E L + T + +Q L+ P +L L + L + + GF + D +
Sbjct: 520 QHAADEKFRYEALWRDTRVDTQPLLAPLSLDLGATEELALLERRCTVERVGFRLAVNDLA 579
Query: 295 DDG-NVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPS--RIRAMFASRACRKSV 351
G V + S+P ++ T G DI EL+ +L + + P ++ +FAS+ACR +V
Sbjct: 580 PPGRRVAVISVPSARGATFGVSDIRELITLLDDDAAHDTTLPKLPKLHTLFASKACRAAV 639
Query: 352 MIGRALSVGEMTGLVRNMGRIDQPW 376
MIG L +MT L+ ++ + QPW
Sbjct: 640 MIGTPLIKTKMTQLLDHLATLLQPW 664
>gi|452986254|gb|EME86010.1| hypothetical protein MYCFIDRAFT_114414, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 983
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/199 (42%), Positives = 120/199 (60%), Gaps = 18/199 (9%)
Query: 196 AESELNRVIKKSMFEKMKIVGQFNLGFIIV-------KYDSDLFIIDQHATDEKYNFETL 248
AES L+ + K F +M+I+GQFNLGFI+ D DLFI+DQHA DEKYN+E L
Sbjct: 760 AESRLSLTVTKPDFARMRIIGQFNLGFILAVRPAAEPGDDDDLFIVDQHAADEKYNYERL 819
Query: 249 QKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSS---DDGNVL----- 300
Q+T ++SQ+LV P+ L LT + ++ N NGFE S+ D V+
Sbjct: 820 QRTVTLQSQRLVRPKPLQLTATQEEVVLSNGDALKANGFEIETTSTVHDSDEPVMTGRRC 879
Query: 301 -LTSLPMSKNTTLGREDIEELLFMLQH--TNSTEHCRPSRIRAMFASRACRKSVMIGRAL 357
L +LPMSK T D+EELL +L T S + RP +++ M A RACR S+M+G+ L
Sbjct: 880 RLLTLPMSKEKTFDLSDLEELLHLLSEHPTGSLDIPRPRKVQRMLAMRACRSSIMVGKTL 939
Query: 358 SVGEMTGLVRNMGRIDQPW 376
++ +M +VR+MG +++PW
Sbjct: 940 TMAQMGKVVRHMGEMEKPW 958
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 1 MKLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVK 54
+K EVY FN Q PFI N+ M+ ++ DVNV+PDKR I + + ++ ++K
Sbjct: 299 LKAFREVYKSFNVSQEPFIFANLVMNTNAYDVNVSPDKRTIMLHDQTAMIESLK 352
>gi|430811787|emb|CCJ30765.1| unnamed protein product [Pneumocystis jirovecii]
Length = 819
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 117/192 (60%), Gaps = 17/192 (8%)
Query: 194 KEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDS-------DLFIIDQHATDEKYNFE 246
+++E++LN + K F MK++GQFNLGFIIV S +LFIIDQHA+DEKY FE
Sbjct: 618 EQSENQLNLALSKKDFFSMKVIGQFNLGFIIVSLPSHKEGSKLELFIIDQHASDEKYKFE 677
Query: 247 TLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGN--VLLTSL 304
L T I+SQ L+ P L+LT I + ++ +++ + KNGF+ D + L SL
Sbjct: 678 KLLLNTTIESQPLLKPYQLNLTIIEEIVVMEHIEILEKNGFKIELDHNKKPGERCKLVSL 737
Query: 305 PMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTG 364
P +K D+EE++ LQ N + + ++IR + AS+ACR SVM+G AL++ M
Sbjct: 738 PQNK-------DLEEMISKLQE-NPQKDVQCNKIRNILASKACRSSVMVGDALTLSTMYN 789
Query: 365 LVRNMGRIDQPW 376
+V+ MG +D PW
Sbjct: 790 IVKRMGEMDNPW 801
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 41/60 (68%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
+ + E+Y +N QYPFI++N+ M ++S D+NV+ DKR IF+ HEK ++ +K + D +
Sbjct: 281 RAIGEIYKMYNILQYPFILINLIMPKNSYDINVSVDKRTIFLHHEKEIICELKSILNDLF 340
>gi|225437328|ref|XP_002267393.1| PREDICTED: mismatch repair endonuclease PMS2-like [Vitis vinifera]
Length = 937
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/195 (42%), Positives = 113/195 (57%), Gaps = 14/195 (7%)
Query: 196 AESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIK 255
A +EL ++ KK F +MK++GQFNLGFII K D DLFI+DQHA DEKYNFE L ++T++
Sbjct: 702 ATTELEKLFKKQDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFEHLAQSTVLN 761
Query: 256 SQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFD--SSDDGNVLLTSLPMSKNTTLG 313
Q L+ P L L+ + I ++ + KNGF D + L ++P SKN T G
Sbjct: 762 QQPLLRPLRLDLSPEEEVIASIHMDIIRKNGFALEEDLHAPPGQRFKLKAVPFSKNITFG 821
Query: 314 REDIEELLFMLQ---------HTNSTEHCR---PSRIRAMFASRACRKSVMIGRALSVGE 361
ED++EL+ L T + C PSR+RAM ASRACR SVMIG L E
Sbjct: 822 VEDVKELISTLADGQGECSILGTYKMDTCDSICPSRVRAMLASRACRSSVMIGDPLGRKE 881
Query: 362 MTGLVRNMGRIDQPW 376
M ++ ++ + PW
Sbjct: 882 MQRILEHLSDLKSPW 896
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
KLVNE+Y N+ QYP I+N + + DVNVTPDKR+IF E +L +++ + Y
Sbjct: 284 KLVNELYKGANSRQYPIAIMNFTVPTRAYDVNVTPDKRKIFFSDEGSILHSLREGLEKIY 343
Query: 62 AIGFT 66
+ T
Sbjct: 344 SPSLT 348
>gi|255564118|ref|XP_002523056.1| DNA mismatch repair protein pms2, putative [Ricinus communis]
gi|223537618|gb|EEF39241.1| DNA mismatch repair protein pms2, putative [Ricinus communis]
Length = 924
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 113/195 (57%), Gaps = 14/195 (7%)
Query: 196 AESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIK 255
A +EL R+ +K F +MK++GQFNLGFII K D DLFI+DQHA DEKYNFE L ++T++
Sbjct: 701 ATTELERIFRKQDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFEHLCQSTILN 760
Query: 256 SQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFD--SSDDGNVLLTSLPMSKNTTLG 313
Q L+ L L+ + + N+ + KNGF D + L ++P SKN T G
Sbjct: 761 QQPLLRSLRLELSPEEEVVASMNMELIRKNGFALEEDPHAPPGHRFKLKAVPFSKNITFG 820
Query: 314 REDIEELLFMLQHT------------NSTEHCRPSRIRAMFASRACRKSVMIGRALSVGE 361
ED+++L+ L + + ++ PSR+R M ASRACR SVMIG L E
Sbjct: 821 VEDVKDLISTLADSQGDCSIIGSYKMDKSDSVCPSRVRTMLASRACRSSVMIGDPLGRNE 880
Query: 362 MTGLVRNMGRIDQPW 376
M ++ ++ ++ PW
Sbjct: 881 MQKILEHLADLNSPW 895
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 38/61 (62%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
KLVNE+Y N+ QYP I+N + + DVNVTPDKR+IF E +L ++ + + Y
Sbjct: 281 KLVNELYRGANSRQYPIAIMNFIVPTRACDVNVTPDKRKIFFSDETSILHALREGLQNIY 340
Query: 62 A 62
+
Sbjct: 341 S 341
>gi|426355461|ref|XP_004045140.1| PREDICTED: mismatch repair endonuclease PMS2-like [Gorilla gorilla
gorilla]
Length = 193
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 107/177 (60%), Gaps = 13/177 (7%)
Query: 208 MFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHL 267
MF +M+I+GQFNLGFII K + D+FI+DQHATDEKYNFE LQ+ T+++ Q+L+ PQ L+L
Sbjct: 1 MFAEMEIIGQFNLGFIITKLNEDIFIVDQHATDEKYNFEMLQQHTVLQGQRLIAPQTLNL 60
Query: 268 TKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLL--------TSLPMSKNTTLGREDIEE 319
T +N+ +L +NL +F KNGF+F D +D G + T S++ + RE+ E
Sbjct: 61 TAVNEAVLIENLEIFRKNGFDFVIDENDPGGLCCVWHEPLERTDGKESRDCSCWRENRLE 120
Query: 320 LLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+ L+ + + + C VMIG AL+ EM L+ +MG +D PW
Sbjct: 121 GVPWLRPLGRAA--AGGHVGSGWDGACC---VMIGTALNTSEMKKLITHMGEMDHPW 172
>gi|297743867|emb|CBI36837.3| unnamed protein product [Vitis vinifera]
Length = 854
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/195 (42%), Positives = 113/195 (57%), Gaps = 14/195 (7%)
Query: 196 AESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIK 255
A +EL ++ KK F +MK++GQFNLGFII K D DLFI+DQHA DEKYNFE L ++T++
Sbjct: 619 ATTELEKLFKKQDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFEHLAQSTVLN 678
Query: 256 SQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFD--SSDDGNVLLTSLPMSKNTTLG 313
Q L+ P L L+ + I ++ + KNGF D + L ++P SKN T G
Sbjct: 679 QQPLLRPLRLDLSPEEEVIASIHMDIIRKNGFALEEDLHAPPGQRFKLKAVPFSKNITFG 738
Query: 314 REDIEELLFMLQ---------HTNSTEHCR---PSRIRAMFASRACRKSVMIGRALSVGE 361
ED++EL+ L T + C PSR+RAM ASRACR SVMIG L E
Sbjct: 739 VEDVKELISTLADGQGECSILGTYKMDTCDSICPSRVRAMLASRACRSSVMIGDPLGRKE 798
Query: 362 MTGLVRNMGRIDQPW 376
M ++ ++ + PW
Sbjct: 799 MQRILEHLSDLKSPW 813
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
KLVNE+Y N+ QYP I+N + + DVNVTPDKR+IF E +L +++ + Y
Sbjct: 284 KLVNELYKGANSRQYPIAIMNFTVPTRAYDVNVTPDKRKIFFSDEGSILHSLREGLEKIY 343
Query: 62 AIGFT 66
+ T
Sbjct: 344 SPSLT 348
>gi|260946133|ref|XP_002617364.1| hypothetical protein CLUG_02808 [Clavispora lusitaniae ATCC 42720]
gi|238849218|gb|EEQ38682.1| hypothetical protein CLUG_02808 [Clavispora lusitaniae ATCC 42720]
Length = 878
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 117/185 (63%), Gaps = 12/185 (6%)
Query: 204 IKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQ 263
I K F +M +VGQFNLGF++V +D+ LFI+DQHA+DE +N+E L ++ ++++Q LV+P+
Sbjct: 668 IHKDDFARMSVVGQFNLGFVVVVHDNRLFIVDQHASDEIFNYERLMQSLVLRAQPLVIPR 727
Query: 264 NLHLTKINQCILKDNLPVFYKNGF--EFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELL 321
L L+ +++ +L +N+ +NGF + D+ V L ++P+SKN D+ EL+
Sbjct: 728 LLELSPVDEMVLLENVENLRRNGFVVQEDADAVPGRRVKLMAVPVSKNVVFDDGDLHELM 787
Query: 322 FMLQHTN-----STEH-----CRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGR 371
L ST+ R S++ M ASRACR+S+MIG++LS M +VR++ R
Sbjct: 788 HRLHENGFASSMSTQERPRLVVRCSKVDKMIASRACRRSIMIGQSLSKNTMAKVVRHLSR 847
Query: 372 IDQPW 376
+++PW
Sbjct: 848 LEKPW 852
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 39/60 (65%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K++NEVY FN Q P +LNIE+ VDVNVTPDKR + ++ E++L ++ +T Y
Sbjct: 295 KVINEVYRTFNATQSPVYVLNIEIDSTFVDVNVTPDKRMVMINSEEILCEVLREELTYFY 354
>gi|453087474|gb|EMF15515.1| DNA mismatch repair protein MutL [Mycosphaerella populorum SO2202]
Length = 1008
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/202 (41%), Positives = 122/202 (60%), Gaps = 18/202 (8%)
Query: 193 NKEAESELNRVIKKSMFEKMKIVGQFNLGFII-------VKYDSDLFIIDQHATDEKYNF 245
+ EAES L+ + KS F +M+IVGQFNLGFI+ + + DLFIIDQHA DEKYN+
Sbjct: 753 SAEAESRLSLTVVKSDFARMQIVGQFNLGFILAIRPGKNLGEEDDLFIIDQHAADEKYNY 812
Query: 246 ETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDS----SDDG---- 297
E L++T ++SQ+LV P+ L LT I + ++ N NGFE S SD+
Sbjct: 813 ERLRRTVTLQSQRLVRPKQLELTAIEEEVILSNRDALKANGFEIETTSDATESDEAVAPG 872
Query: 298 -NVLLTSLPMSKNTTLGREDIEELLFMLQHT--NSTEHCRPSRIRAMFASRACRKSVMIG 354
L +LPMS+ T D+EELL +L S++ RP +++ M A RACR S+M+G
Sbjct: 873 SRCRLLTLPMSREKTFDLSDLEELLHLLSEEPPGSSDVPRPMKVQRMLAMRACRSSIMVG 932
Query: 355 RALSVGEMTGLVRNMGRIDQPW 376
+ L+ +M ++ +MG +++PW
Sbjct: 933 KTLTHAQMKKVINHMGEMEKPW 954
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 38/60 (63%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K VNEVY FN Q PF++ N+ M ++ DVNV+PDKR I + + LL T K +T+ +
Sbjct: 300 KAVNEVYKSFNVLQTPFVLANLIMDTNAYDVNVSPDKRSIMLHDQTALLETFKSALTEMF 359
>gi|147768838|emb|CAN75888.1| hypothetical protein VITISV_023640 [Vitis vinifera]
Length = 3804
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/217 (38%), Positives = 113/217 (52%), Gaps = 36/217 (16%)
Query: 196 AESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIK 255
A +EL ++ KK F +MK++GQFNLGFII K D DLFI+DQHA DEKYNFE L ++T++
Sbjct: 3419 ATTELEKLFKKQDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFEHLAQSTVLN 3478
Query: 256 SQKL----------------------VVPQNLHLTKINQCILKDNLPVFYKNGFEFSFD- 292
Q L + P L L+ + I ++ + KNGF D
Sbjct: 3479 QQPLLRYGVQNIHEVTSIELLCVSYTIGPLRLDLSPEEEVIAFIHMDIIRKNGFALEEDL 3538
Query: 293 -SSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQ---------HTNSTEHCR---PSRIR 339
+ L ++P SKN T G ED++EL+ L T + C PSR+R
Sbjct: 3539 HAPPGQRFKLKAVPFSKNITFGVEDVKELISTLADGQGECSILGTYKMDTCDSICPSRVR 3598
Query: 340 AMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
AM ASRACR SVMIG L EM ++ ++ + PW
Sbjct: 3599 AMLASRACRSSVMIGDPLGRKEMQRILEHLSDLKSPW 3635
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
KLVNE+Y N+ QYP I+N + + DVNVTPDKR+IF E +L +++ + Y
Sbjct: 2983 KLVNELYKGANSRQYPIAIMNFTVPTRAYDVNVTPDKRKIFFSDEGSILHSLREGLEKIY 3042
Query: 62 AIGFT 66
+ T
Sbjct: 3043 SPSLT 3047
>gi|449300554|gb|EMC96566.1| hypothetical protein BAUCODRAFT_33929 [Baudoinia compniacensis UAMH
10762]
Length = 1130
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/197 (41%), Positives = 118/197 (59%), Gaps = 16/197 (8%)
Query: 196 AESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDS-------DLFIIDQHATDEKYNFETL 248
AE +L+ + K FE+M +VGQFNLGFI+ + +LFIIDQHA DEKYN+E L
Sbjct: 881 AEGKLSLTVSKPDFERMMVVGQFNLGFIVAVRSAQDEEEQDELFIIDQHAADEKYNYERL 940
Query: 249 QKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSF-------DSSDDGNVLL 301
Q+T ++SQ+LV P+ L LT I + I+ ++ NGFE D S + + L
Sbjct: 941 QRTVTLQSQRLVRPKLLELTAIEEEIILNHSAALKSNGFEIEVSSSTDDDDESTNRHCRL 1000
Query: 302 TSLPMSKNTTLGREDIEELLFMLQHT--NSTEHCRPSRIRAMFASRACRKSVMIGRALSV 359
+LP+S T D+EELL +L S+E RP +++ M A RACR S+MIG+ L
Sbjct: 1001 LTLPISGEKTFDVSDLEELLHLLSEAPPGSSEILRPKKVQRMLAMRACRSSIMIGKTLMH 1060
Query: 360 GEMTGLVRNMGRIDQPW 376
+M +VR+MG +++PW
Sbjct: 1061 RQMVKVVRHMGEMEKPW 1077
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 39/60 (65%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K +NEVY +N Q PFI N+ + +S DVNV+PDKR I + ++ LL ++K +T+ +
Sbjct: 300 KAINEVYKSYNVSQSPFIFANLIVDTNSYDVNVSPDKRTIMLHNQTALLESLKTALTELF 359
>gi|3193291|gb|AAC19275.1| T14P8.6 [Arabidopsis thaliana]
gi|7269006|emb|CAB80739.1| AT4g02460 [Arabidopsis thaliana]
Length = 779
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 107/178 (60%), Gaps = 14/178 (7%)
Query: 213 KIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQ 272
+++GQFNLGFII K + DLFI+DQHA DEK+NFE L ++T++ Q L+ P NL L+ +
Sbjct: 562 RVLGQFNLGFIIAKLERDLFIVDQHAADEKFNFEHLARSTVLNQQPLLQPLNLELSPEEE 621
Query: 273 CILKDNLPVFYKNGF--EFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQ----- 325
+ ++ + +NGF E + + + L ++P SKN T G ED+++L+ L
Sbjct: 622 VTVLMHMDIIRENGFLLEENPSAPPGKHFRLRAIPYSKNITFGVEDLKDLISTLGDNHGE 681
Query: 326 -------HTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
T+ T+ PSR+RAM ASRACR SVMIG L EM +V ++ ++ PW
Sbjct: 682 CSVASSYKTSKTDSICPSRVRAMLASRACRSSVMIGDPLRKNEMQKIVEHLADLESPW 739
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 39/61 (63%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
KLVNE+Y ++ +YP IL+ + + D+NVTPDKR++F E ++ +++ + + Y
Sbjct: 280 KLVNELYKDTSSRKYPVTILDFIVPGGACDLNVTPDKRKVFFSDETSVIGSLREGLNEIY 339
Query: 62 A 62
+
Sbjct: 340 S 340
>gi|308805450|ref|XP_003080037.1| putative PMS2 postmeiotic segregation incre (ISS) [Ostreococcus
tauri]
gi|116058496|emb|CAL53685.1| putative PMS2 postmeiotic segregation incre (ISS) [Ostreococcus
tauri]
Length = 1013
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 101/297 (34%), Positives = 140/297 (47%), Gaps = 79/297 (26%)
Query: 130 PDETIEVIDD----------MPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRC 179
PD T E++DD + R + S++++T Q +KA + A D
Sbjct: 528 PDATEEILDDGSIPFSMEDMLARRRNSHKRAT-------AKQSAVKAFDSAHVSAADDDT 580
Query: 180 VENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHAT 239
E+ A A EL RV K+ F KM+IVGQFNLGFI+ DLFIIDQHA+
Sbjct: 581 AESTERATA-------AARELERVFDKADFAKMRIVGQFNLGFILATLGDDLFIIDQHAS 633
Query: 240 DEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEF---------- 289
DE YNFE LQ+TT + Q L+ P L LT + + N+PVF KNGF F
Sbjct: 634 DEIYNFERLQRTTTLSKQPLIHPVPLDLTASEEQTVLQNMPVFLKNGFGFCDVAESVPGA 693
Query: 290 -----SFD-SSDDGNVLLTSLPMSKNTTLGREDIEELLFML---QHT---NS------TE 331
S D S+ G++ L+++P+ KN + D+ EL+ ML QH+ NS T
Sbjct: 694 DMNNSSVDPSARCGSLRLSAVPVLKNVVFDKTDVHELVSMLDRGQHSLPANSQLSIGLTR 753
Query: 332 H------------CRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
H RP++ RA A +ACR G++ N+ +D PW
Sbjct: 754 HDQRGDSSSDVRVLRPAKTRAALAMKACR---------------GVLNNLTTLDAPW 795
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 44/61 (72%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
++VNE Y FN +Q P ++L+ +++ ++ DVNVTPDKR+I + E+ +LA ++ + +++
Sbjct: 288 RVVNETYRSFNPNQAPMVVLDFQLATNAYDVNVTPDKRKIMLHDEEAILAQMRDKLLEAF 347
Query: 62 A 62
+
Sbjct: 348 S 348
>gi|340960378|gb|EGS21559.1| DNA mismatch repair protein pms1-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 1018
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 75/172 (43%), Positives = 105/172 (61%), Gaps = 26/172 (15%)
Query: 192 KNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIV-------------------KYDSDLF 232
++++AE++L+ I KS F KM+IVGQFNLGFI+ K D +LF
Sbjct: 841 ESEDAEAKLSLKISKSDFTKMRIVGQFNLGFILAVREAVSASSSTSCSRDSGTKDDDELF 900
Query: 233 IIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFD 292
IIDQHA+DEKYNFE LQ TT ++SQ+LV P+ L LT + + I+ NLP +NGF S D
Sbjct: 901 IIDQHASDEKYNFERLQATTTVQSQRLVQPKTLSLTALEEEIILANLPALERNGFSVSVD 960
Query: 293 SSD----DGNVLLTSLPMSKNTTLGREDIEELLFMLQH---TNSTEHCRPSR 337
+S + L +LP+S+ TT D+EEL+F+L +N+T RPS+
Sbjct: 961 TSGASPVGSRIQLLTLPLSRETTFSIADLEELIFLLADNPTSNATTVPRPSK 1012
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLL 50
K+ NEVY +N+ Q PFI +I++ DVNV+PDKR I + + +L
Sbjct: 299 KVFNEVYRLYNSSQSPFIFADIQLDTHLYDVNVSPDKRTILLHDQGQML 347
>gi|452845086|gb|EME47019.1| hypothetical protein DOTSEDRAFT_69112 [Dothistroma septosporum NZE10]
Length = 1128
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 77/208 (37%), Positives = 119/208 (57%), Gaps = 18/208 (8%)
Query: 187 NIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIV-------KYDSDLFIIDQHAT 239
N D + EAES L+ + KS FE+M ++GQFN GF++ + D+FIIDQHA
Sbjct: 865 NKDELDDAEAESRLSLTVIKSDFERMIVLGQFNQGFVLALRPAAESGGEDDIFIIDQHAA 924
Query: 240 DEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEF---SFDSSDD 296
DEKYN+E LQ+T ++SQ+LV P L LT + + +L + NGF+ S+ + +
Sbjct: 925 DEKYNYERLQRTVTLQSQRLVRPLPLELTAVQEELLLTHSDALKANGFDVETTSYVTDEH 984
Query: 297 GNVL------LTSLPMSKNTTL--GREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACR 348
+V L +LPMSK T + L Q + RP+++++M A RACR
Sbjct: 985 EDVYPGHQFRLLTLPMSKEKTFDLSDLEELLHLLSEQPAGGSFIPRPNKVQSMLAMRACR 1044
Query: 349 KSVMIGRALSVGEMTGLVRNMGRIDQPW 376
S+M+G+ L+ +M +VR+MG +++PW
Sbjct: 1045 SSIMVGKTLAFKQMEKVVRHMGEMEKPW 1072
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 38/60 (63%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K +NEVY FN Q PFI N+ M ++ DVNV+PDKR I + + LL T+K +T+ +
Sbjct: 300 KAINEVYKSFNTSQSPFIFANLVMDTNAYDVNVSPDKRTIMLHDQTALLETLKAALTELF 359
>gi|403417453|emb|CCM04153.1| predicted protein [Fibroporia radiculosa]
Length = 1123
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 99/169 (58%), Gaps = 26/169 (15%)
Query: 200 LNRVIKKSMFEKMKIVGQFNLGFIIVKY-------------------DSDLFIIDQHATD 240
L RVI K+ F M IVGQFNLGFI+V+ D DLFI+DQHA D
Sbjct: 901 LARVIDKTDFAVMDIVGQFNLGFIVVRRQRRTDADDSTRQNGLDKIDDDDLFIVDQHAAD 960
Query: 241 EKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDG--- 297
EKYNFETLQ+TT+IKSQ+L P L LT ++ + ++N+ V +NGFE S DDG
Sbjct: 961 EKYNFETLQQTTVIKSQRLFRPLPLELTAADELLARENVNVLKQNGFEVEL-SPDDGCGG 1019
Query: 298 --NVLLTSLPMSKNTTLGREDIEELLFMLQ-HTNSTEHCRPSRIRAMFA 343
+ L + P SK T +D+EELL +LQ + + R S+ RAMFA
Sbjct: 1020 ARRLQLIAQPTSKETVFDVKDLEELLHLLQDRSPGGQPVRCSKARAMFA 1068
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K NEVY FN Q PFI+ N + +S DVNV+PDKR I + E L+ +K + +
Sbjct: 343 KAFNEVYRTFNATQSPFIVANFNLPTESCDVNVSPDKRTILLHSENNLVQALKAALEQKF 402
Query: 62 A---IGFTVDGNNMNQSMEQDPS 81
A + V + +Q++ P+
Sbjct: 403 APSRATYDVSAASASQAVHSQPT 425
>gi|303391489|ref|XP_003073974.1| DNA mismatch repair protein MutL [Encephalitozoon intestinalis ATCC
50506]
gi|303303123|gb|ADM12614.1| DNA mismatch repair protein MutL [Encephalitozoon intestinalis ATCC
50506]
Length = 635
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/175 (41%), Positives = 107/175 (61%), Gaps = 15/175 (8%)
Query: 206 KSMFEKMKIVGQFNLGFIIVKYDSD----LFIIDQHATDEKYNFETLQKTTLIKSQKLVV 261
KS F +++I+GQFN GFII K + + L +DQHA DE NFE ++KT +K Q ++V
Sbjct: 455 KSDFNRLEIIGQFNNGFIIAKLEKNEKTYLIAVDQHAADEIRNFENIKKTFYLKKQSVIV 514
Query: 262 PQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELL 321
P L LT I + I+ +N VF KNGF N +L ++P+ +N G ++ ELL
Sbjct: 515 PVKLDLTPIEEMIVNENSEVFEKNGFVVK-------NGMLETIPVYRNQVFGIKEFRELL 567
Query: 322 FMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+++ E +IR++ AS+ACR SVMIG ALS +M +VR++G +D+PW
Sbjct: 568 EDVKN----EEYEFKKIRSIIASKACRTSVMIGDALSAADMKRIVRSLGVLDRPW 618
>gi|294932553|ref|XP_002780330.1| dna mismatch repair protein pms2, putative [Perkinsus marinus ATCC
50983]
gi|239890252|gb|EER12125.1| dna mismatch repair protein pms2, putative [Perkinsus marinus ATCC
50983]
Length = 483
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 106/179 (59%), Gaps = 12/179 (6%)
Query: 204 IKKSMFEKMKIVGQFNLGFIIVKYDSD-LFIIDQHATDEKYNFETLQKTTLIKSQKLVVP 262
+ K FE M+++GQFN GFII + LFI+DQHA DEK FETL KT+ +KSQ ++VP
Sbjct: 270 LGKEDFEAMRVIGQFNKGFIITALEGRWLFILDQHACDEKTIFETLNKTSELKSQPMIVP 329
Query: 263 QNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDG----NVLLTSLPMSKNTTLGREDIE 318
L L + ++ + GF F+FD DD V LTSL ++ LG E I
Sbjct: 330 VRLSLPPPLESCIRGSRREIEACGFRFNFD--DDAPIGSRVQLTSLGVASG--LGFERIP 385
Query: 319 ELLFMLQHTNSTEHC-RPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
L +++ HC RP R+ +M ASRACR ++MIG +LS +M G+VR M ++QPW
Sbjct: 386 SA--SLFWSSALGHCLRPPRVWSMLASRACRTAIMIGDSLSRKKMEGVVRKMAALNQPW 442
>gi|148687083|gb|EDL19030.1| postmeiotic segregation increased 2 (S. cerevisiae), isoform CRA_b
[Mus musculus]
Length = 794
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/124 (52%), Positives = 84/124 (67%), Gaps = 7/124 (5%)
Query: 257 QKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVL----LTSLPMSKNTTL 312
+K + PQ L+LT +N+ +L +NL +F KNGF+F D +D V L SLP SKN T
Sbjct: 653 RKEIRPQTLNLTAVNEAVLIENLEIFRKNGFDFVID--EDAPVTERAKLISLPTSKNWTF 710
Query: 313 GREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRI 372
G +DI+EL+FML + CRPSR+R MFASRACRKSVMIG AL+ EM L+ +MG +
Sbjct: 711 GPQDIDELIFMLSDSPGV-MCRPSRVRQMFASRACRKSVMIGTALNASEMKKLITHMGEM 769
Query: 373 DQPW 376
D PW
Sbjct: 770 DHPW 773
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/111 (46%), Positives = 71/111 (63%), Gaps = 13/111 (11%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
KLVNEVYH +N HQYPF++LN+ + + VD+NVTPDKRQI + EKLLLA +K +
Sbjct: 295 KLVNEVYHMYNRHQYPFVVLNVSVDSECVDINVTPDKRQILLQEEKLLLAVLKTSL---- 350
Query: 62 AIG-FTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPS-EDNS 110
IG F D N +N + Q P DV+ + + ++ E+E PVP +DNS
Sbjct: 351 -IGMFDSDANKLN--VNQQPLLDVEGNLV-KLHTAELEK---PVPGKQDNS 394
>gi|401828154|ref|XP_003888369.1| putative DNA mismatch repair enzyme [Encephalitozoon hellem ATCC
50504]
gi|392999641|gb|AFM99388.1| putative DNA mismatch repair enzyme [Encephalitozoon hellem ATCC
50504]
Length = 635
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 105/175 (60%), Gaps = 15/175 (8%)
Query: 206 KSMFEKMKIVGQFNLGFIIVKYDSD----LFIIDQHATDEKYNFETLQKTTLIKSQKLVV 261
K F +++++GQFN GFII K + + L +DQHA DE NFE+++KT +K Q ++V
Sbjct: 455 KGDFSRLEVIGQFNNGFIISKLEKNGSVYLVAVDQHAADEIKNFESIRKTFRMKKQSVIV 514
Query: 262 PQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELL 321
P L LT I + ++ DNL +F +NGF N +L ++P+ KN G I+E
Sbjct: 515 PVKLDLTPIEEMVVSDNLELFERNGFVIK-------NGMLEAIPVYKNQVFG---IKEFR 564
Query: 322 FMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
L+ + EH +IR + AS+ACR SVMIG ALS+ +M +V+ + +D+PW
Sbjct: 565 EFLESVKNDEH-EFKKIRDIVASKACRTSVMIGDALSIADMKRIVKGLASLDRPW 618
>gi|396082487|gb|AFN84096.1| DNA mismatch repair protein MutL [Encephalitozoon romaleae SJ-2008]
Length = 633
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 107/175 (61%), Gaps = 15/175 (8%)
Query: 206 KSMFEKMKIVGQFNLGFIIVKYDSD----LFIIDQHATDEKYNFETLQKTTLIKSQKLVV 261
K F +M+++GQFN GFII K + L +DQHA DE NFE+++KT +K Q ++V
Sbjct: 453 KEDFTRMEVIGQFNNGFIISKLKKNDKIYLVAVDQHAADEIRNFESIKKTFRLKKQSVIV 512
Query: 262 PQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELL 321
P L LT I + I+ DNL +F +NGF N +L ++P+ KN G ++ +ELL
Sbjct: 513 PVKLDLTPIEEVIVNDNLELFERNGFVIK-------NGMLETIPVYKNQVFGVKEFQELL 565
Query: 322 FMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+++ + RIR + AS+ACR SVMIG ALS+ +M +V+++ +D+PW
Sbjct: 566 EDMKN----DEYEFKRIRNIIASKACRTSVMIGDALSMADMKKIVKSLSFLDRPW 616
>gi|189197831|ref|XP_001935253.1| DNA mismatch repair protein PMS1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187981201|gb|EDU47827.1| DNA mismatch repair protein PMS1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 848
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/184 (41%), Positives = 99/184 (53%), Gaps = 23/184 (12%)
Query: 193 NKEAESELNRVIKKSMFEKMKIVGQFNLGFIIV-------KYDSDLFIIDQHATDEKYNF 245
+ + E L+ + KS F M+IVGQFN GFII SDLFIIDQHA+DEKYNF
Sbjct: 664 DADPEERLSLTVTKSDFHDMRIVGQFNQGFIIAVRPPTSTAPTSDLFIIDQHASDEKYNF 723
Query: 246 ETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDD--------- 296
E L TT++ SQ+LV P L L+ + + I+ N NGF +D+
Sbjct: 724 ERLAATTVLVSQRLVHPHPLELSAVEKEIILANEHALLANGFVIETTDADEETPNPNNTT 783
Query: 297 GNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHC-------RPSRIRAMFASRACRK 349
LTSLPMSK T D+EELL ++ + RP+++R + ASRACR
Sbjct: 784 TTAHLTSLPMSKEITFSPTDLEELLALILDNPPSSSTSTSPYIPRPTKVRKLLASRACRS 843
Query: 350 SVMI 353
SVMI
Sbjct: 844 SVMI 847
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 52/98 (53%), Gaps = 7/98 (7%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K NEVY +N Q PFI +I++ ++ DVNV+PDKR I + + LL +K +S
Sbjct: 304 KAFNEVYKSYNVTQSPFIFADIQLDTNAYDVNVSPDKRTIMLHDQTALLENLK----NSL 359
Query: 62 AIGFTVDGNNMNQSM---EQDPSSDVDMEKIQRSNSEE 96
F +M QS ++ P+S +QR +SEE
Sbjct: 360 IELFEGQDQSMPQSQLLGKKTPTSAFKPPTMQRRDSEE 397
>gi|294909575|ref|XP_002777799.1| DNA mismatch repair protein PMS1, putative [Perkinsus marinus ATCC
50983]
gi|239885761|gb|EER09594.1| DNA mismatch repair protein PMS1, putative [Perkinsus marinus ATCC
50983]
Length = 925
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 109/201 (54%), Gaps = 28/201 (13%)
Query: 204 IKKSMFEKMKIVGQFNLGFIIVKYDSD-LFIIDQHATDEKYNFETLQKTTLIKSQKLVVP 262
+ K FE M+++GQFN GFII + LFI+DQHA DEK FETL KT+ +KSQ ++VP
Sbjct: 684 LGKEDFEAMRVIGQFNKGFIITALEGRWLFILDQHACDEKTIFETLNKTSELKSQPMIVP 743
Query: 263 QNLHLTKINQCILKDNLPVFYKNGFEFSF--DSSDDGNVLLTSLPMS------KNTTLGR 314
L L + ++ + GF F+F D+ V LTSL ++ ++ L +
Sbjct: 744 VRLSLPPPLESCIRGSRREIEACGFRFNFADDAPIGSRVQLTSLGVASGLGFERSRPLTK 803
Query: 315 EDIEELLFMLQHTNSTE------------------HC-RPSRIRAMFASRACRKSVMIGR 355
ED +L +L +T HC RP R+ +M ASRACR ++MIG
Sbjct: 804 EDFVDLASLLLDRGATGRSDDELPSASLFWSSALGHCLRPPRVWSMLASRACRTAIMIGD 863
Query: 356 ALSVGEMTGLVRNMGRIDQPW 376
+LS +M G+VR M ++QPW
Sbjct: 864 SLSRKKMEGVVRKMAALNQPW 884
>gi|403361297|gb|EJY80348.1| DNA mismatch repair enzyme (predicted ATPase) [Oxytricha trifallax]
Length = 984
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 108/199 (54%), Gaps = 19/199 (9%)
Query: 197 ESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDS-DLFIIDQHATDEKYNFETLQKTTLIK 255
E EL + KK F+ +++ GQFN GFI+ + DLFI+DQHA DEKYNFE +TT+I+
Sbjct: 753 EKELLKRFKKDDFKNLQVKGQFNSGFIMATLNEHDLFILDQHACDEKYNFENFSRTTVIE 812
Query: 256 SQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDD---GNVLLTSLPMSKNTTL 312
SQ L+ P + L+ + +K + VF NGF+ + +D L+ SLP K T
Sbjct: 813 SQDLMHPIQVDLSVTDALAVKMHSDVFRMNGFKVVPKNEEDEMCNTYLIKSLPFVKKATF 872
Query: 313 GREDIEELLFML--------QHTNSTEHC-------RPSRIRAMFASRACRKSVMIGRAL 357
+D ELL ++ + TN E RPS+I + ASRACR S+M+G L
Sbjct: 873 SVDDFYELLNIVSANLDLDKEQTNRKEQSLLHKELLRPSKIYSNLASRACRTSIMVGTVL 932
Query: 358 SVGEMTGLVRNMGRIDQPW 376
M +V N+ ++ PW
Sbjct: 933 DNKTMNKVVNNLATLESPW 951
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 40/59 (67%)
Query: 3 LVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
L +E+Y Q+N P I +NIE+ ++ D+NV+PDKR +F+ +E ++ +++ +T+ Y
Sbjct: 192 LFSEIYRQYNPSMNPMIFMNIEVEDNNYDINVSPDKRDVFLKNEDEVIEALRIKLTEFY 250
>gi|229594773|ref|XP_001030203.2| DNA mismatch repair protein, C-terminal domain containing protein
[Tetrahymena thermophila]
gi|117556977|gb|ABK35674.1| putative mismatch repair protein [Tetrahymena thermophila]
gi|225566596|gb|EAR82540.2| DNA mismatch repair protein, C-terminal domain containing protein
[Tetrahymena thermophila SB210]
Length = 946
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 104/179 (58%), Gaps = 6/179 (3%)
Query: 204 IKKSMFEKMKIVGQFNLGFIIVKY--DSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVV 261
KK F +++I+GQFN FII + +F+IDQHA+DEK N+E L K + QKLV
Sbjct: 738 FKKDKFVELQIIGQFNKAFIIAYWVEKDQIFLIDQHASDEKTNYERLLKENNFQGQKLVK 797
Query: 262 PQNLHLTKINQCILKDNLPVFYKNGFEFSF---DSSDDGNVLLTSLPMSKNTTLGREDIE 318
P L LT IL++N +F KNGF+F +S+ + N+ + LP SK+ D +
Sbjct: 798 PIELSLTIQEADILENNREIFKKNGFQFQIKYDESNGEPNLYINQLPSSKHIQFNINDFD 857
Query: 319 ELLFMLQHTNS-TEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
E+ + + + E RP +I+ + AS+ACR S+MIG AL+ M ++ N+ ++ PW
Sbjct: 858 EIFQNINNEETDIETFRPKKIQRILASKACRSSIMIGTALNKSSMKQILLNLSKLQSPW 916
Score = 44.3 bits (103), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 72/150 (48%), Gaps = 24/150 (16%)
Query: 3 LVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY- 61
+ +++Y ++N+ IL++++ +D++D NV+PDKR IF+ +E ++ ++T +
Sbjct: 283 IFSDIYKKYNSSARYIYILHLKVKKDAIDFNVSPDKRDIFIKYENEFYTALRDNLTQLFE 342
Query: 62 ------------AIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHET-------- 101
I + +M+ S +D S + ++ Q++ S + +T
Sbjct: 343 KLNSIQKVLMPVVISSKIKDTSMDDS--EDDSQESSNQQKQKTLSTQQTKQTKLFQKLKQ 400
Query: 102 -IPVPSEDNSNFSHEANLQQSPETVEPDTP 130
I + ED SN EAN Q+ E + +P
Sbjct: 401 EINIQEEDLSNEDSEANNQKELEILSFKSP 430
>gi|449018025|dbj|BAM81427.1| similar to postmeiotic segregation increased 2 [Cyanidioschyzon
merolae strain 10D]
Length = 830
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 100/187 (53%), Gaps = 3/187 (1%)
Query: 193 NKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTT 252
+ EA+ EL + K FE+M+I+GQFN GFI+ Y SDLFIIDQHA DEKY +E+L +
Sbjct: 619 STEADRELEQRFHKHWFEEMRIIGQFNCGFILATYGSDLFIIDQHAADEKYIYESLARAL 678
Query: 253 LIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGF--EFSFDSSDDGNVLLTSLPMSKNT 310
++Q ++ P ++ + + L + GF EF + + V + P T
Sbjct: 679 RPRTQSMLQPLSIPASASEELTLWEQRENLAALGFELEFRWSAPPTERVWMLGAPTVCQT 738
Query: 311 TLGREDIEELLFMLQHTNS-TEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
L D+ E+ T + R SR++ + A+RACR++VMIG L M +V +
Sbjct: 739 VLEATDLLEIAHQAPLTGRVADLLRASRVKLLLATRACRRAVMIGMPLDRTHMQSIVARL 798
Query: 370 GRIDQPW 376
++QPW
Sbjct: 799 ATLEQPW 805
>gi|384490226|gb|EIE81448.1| hypothetical protein RO3G_06153 [Rhizopus delemar RA 99-880]
Length = 591
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/154 (44%), Positives = 100/154 (64%), Gaps = 5/154 (3%)
Query: 184 FHANIDPSK-NKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYD-SDLFIIDQHATDE 241
F+A + ++ N +A LNRVI K FE+M+++GQFNLGF+I D DL+IIDQHA+DE
Sbjct: 437 FYAGVQNTEDNDKAVEALNRVIHKPDFERMRVLGQFNLGFMITSLDDQDLYIIDQHASDE 496
Query: 242 KYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGF--EFSFDSSDDGNV 299
KYNFETLQ+T + +QKL+ PQ LT + I+ DN+ VF NGF E D+ +
Sbjct: 497 KYNFETLQQTVKVNNQKLISPQIPDLTAAEELIVMDNIEVFKANGFDVEIITDNEPTKRL 556
Query: 300 LLTSLPMSKNTTLGREDIEELLFML-QHTNSTEH 332
+ S P++K L ++D EL+++L +H + T +
Sbjct: 557 RVLSQPVTKKAMLDKKDFSELIYLLSEHPDCTAY 590
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 36/52 (69%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATV 53
K +NE+Y F ++QYPFII + ++ D+ DVNV+PDKR IF+ E + T+
Sbjct: 125 KALNEIYRSFISNQYPFIIADFKIPTDAYDVNVSPDKRTIFIHEESKIAETI 176
>gi|328769413|gb|EGF79457.1| hypothetical protein BATDEDRAFT_89533 [Batrachochytrium
dendrobatidis JAM81]
Length = 613
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 101/176 (57%), Gaps = 5/176 (2%)
Query: 204 IKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQ 263
I+KS F+ M ++GQFNLGFI+ + + +FIIDQHA+DEKY +ETLQ+ + Q LV
Sbjct: 423 IQKSDFKSMTVLGQFNLGFILALHGNMIFIIDQHASDEKYRYETLQQIAMTTFQPLVQKL 482
Query: 264 NLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVL-LTSLPMSKNTTLGREDIEELLF 322
L LT + ++ + GF D + L ++P ++ LG D+EE+L
Sbjct: 483 ELTLTYQQERLILQWKQSLRERGFVLEQIEKDGRDYFQLIAVPHIRDLHLGIADLEEILA 542
Query: 323 MLQHTNS--TEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
L + HC +R FAS+ACR++ MIG LS +M ++ NMGRI+QPW
Sbjct: 543 KLGPASGQRVPHC--TRTLKYFASKACRQATMIGDPLSYAKMCAIIENMGRIEQPW 596
Score = 45.1 bits (105), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K +N+ YH F Q P ILNI + +DVN++PDKR + + +E L+ ++ I S
Sbjct: 249 KSINDTYHDFVTTQNPIFILNISVDPGWIDVNISPDKRLLAILNEAALIQGIQEGIQRS 307
>gi|320032950|gb|EFW14900.1| DNA mismatch repair protein [Coccidioides posadasii str. Silveira]
Length = 939
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/159 (42%), Positives = 96/159 (60%), Gaps = 19/159 (11%)
Query: 196 AESELNRVIKKSMFEKMKIVGQFNLGFIIV---KYDS----------DLFIIDQHATDEK 242
AE+ L+ + K F KM++VGQFNLGFI+ DS +LFIIDQHA+DEK
Sbjct: 740 AETRLSLTVSKEDFAKMRVVGQFNLGFILAIRPGTDSTDFQDNPTKDELFIIDQHASDEK 799
Query: 243 YNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNV--- 299
YNFE LQ T++++Q+LV P+ L LT + + ++ DN+P KNGF D+S D +
Sbjct: 800 YNFERLQAETVVQNQRLVRPKTLDLTAVEEEVIIDNIPTLEKNGFIVDIDTSGDEPIGRR 859
Query: 300 -LLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSR 337
L SLP+SK D+EEL+ +L + S +H R S+
Sbjct: 860 CKLISLPLSKEVVFNTRDLEELIVLL--SESPQHHRASQ 896
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHIT 58
+ NEVY FN Q PFI N EM+ ++ DVNV+PDKR I + L+ ++K +T
Sbjct: 295 RAFNEVYRSFNISQSPFIFANFEMNTNAYDVNVSPDKRTILLHDAGALIESLKASLT 351
>gi|119189999|ref|XP_001245606.1| hypothetical protein CIMG_05047 [Coccidioides immitis RS]
Length = 939
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/256 (33%), Positives = 133/256 (51%), Gaps = 40/256 (15%)
Query: 96 EVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTL 155
+ ET VPSE+N +H+ + + D T+E+ M + GS + +
Sbjct: 661 QAAEETANVPSENNLERAHKMSKRSRGR-------DSTVEL---MCSVDGSLAK---IEA 707
Query: 156 SLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIV 215
L ++Q+ L++ + +A + + D AE+ L+ + K F KM++V
Sbjct: 708 QLKLLQENLESL---KNYKASEEPISEEASEQQD-----SAETRLSLTVSKDDFAKMRVV 759
Query: 216 GQFNLGFIIV---KYDS----------DLFIIDQHATDEKYNFETLQKTTLIKSQKLVVP 262
GQFNLGFI+ DS +LFIIDQHA+DEKYNFE LQ T++++Q+LV P
Sbjct: 760 GQFNLGFILAIRPGTDSTDFQDNPTKDELFIIDQHASDEKYNFERLQAETVVQNQRLVRP 819
Query: 263 QNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNV----LLTSLPMSKNTTLGREDIE 318
+ L LT + + ++ DN+P KNGF D+S D + L SLP+SK D+E
Sbjct: 820 KTLDLTAVEEEVIIDNIPTLEKNGFIVDIDTSGDEPIGRRCKLISLPLSKEVVFNTRDLE 879
Query: 319 ELLFMLQHTNSTEHCR 334
EL+ +L + S +H R
Sbjct: 880 ELIVLL--SESPQHHR 893
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
+ NEVY FN Q PFI N EM+ ++ DVNV+PDKR I + L+ ++K +T+ +
Sbjct: 295 RAFNEVYRSFNISQSPFIFANFEMNTNAYDVNVSPDKRTILLHDAGALIESLKTSLTELF 354
>gi|397526164|ref|XP_003833006.1| PREDICTED: LOW QUALITY PROTEIN: mismatch repair endonuclease PMS2
[Pan paniscus]
Length = 977
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 99/194 (51%), Gaps = 44/194 (22%)
Query: 183 RFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEK 242
+F A I P +N+ AE EL + I K+MF +M+I+GQFNLGFII K + D+FI+DQHATDEK
Sbjct: 807 KFRAKICPGENQAAEDELRKEISKTMFAEMEIIGQFNLGFIITKLNEDIFIVDQHATDEK 866
Query: 243 YNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLT 302
YNFE LQ+ T+++ Q+L+ PQ + K L GF L
Sbjct: 867 YNFEMLQQHTVLQGQRLIAPQGAAGRR------KVTL------GFR------------LV 902
Query: 303 SLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEM 362
S P S T GRE L + T+ VMIG AL+ EM
Sbjct: 903 SSP-SCQRTHGREAAGPGLECYGQQSHTQ-------------------VMIGTALNTSEM 942
Query: 363 TGLVRNMGRIDQPW 376
L+ +MG +D PW
Sbjct: 943 KKLITHMGEMDHPW 956
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 59/90 (65%), Gaps = 8/90 (8%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
+LVNEVYH +N HQYPF++LNI + + VD+NVTPDKRQI + EKLLLA +K +
Sbjct: 464 RLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSL---- 519
Query: 62 AIG-FTVDGNNMNQSMEQDPSSDVDMEKIQ 90
IG F D N +N S Q P DV+ I+
Sbjct: 520 -IGMFDSDVNKLNVS--QQPLLDVEGNLIK 546
>gi|449328577|gb|AGE94854.1| DNA mismatch repair protein [Encephalitozoon cuniculi]
Length = 630
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 105/175 (60%), Gaps = 15/175 (8%)
Query: 206 KSMFEKMKIVGQFNLGFIIVKYDSD----LFIIDQHATDEKYNFETLQKTTLIKSQKLVV 261
K F +++I+GQFN GFII K + + L +DQHA DE NFE ++KT +K Q ++
Sbjct: 450 KGDFGRLEIIGQFNNGFIITKLEKNKKTYLVAVDQHAADEIRNFEDIKKTFCLKKQSVIS 509
Query: 262 PQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELL 321
P L LT I + ++ DN+ +F +NGF DG +L ++P+ KN T G + ELL
Sbjct: 510 PVKLDLTPIEEMVVSDNVELFERNGFVVK-----DG--MLETVPVYKNQTFGIREFRELL 562
Query: 322 FMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+++ E + R++ AS+ACR SVMIG LS+ +M +V+++ +++PW
Sbjct: 563 EDVKN----EEYEFRKARSIIASKACRTSVMIGDVLSMADMKRIVKSLASLERPW 613
>gi|19074926|ref|NP_586432.1| DNA MISMATCH REPAIR PROTEIN OF THE MUTL/HEXB FAMILY
[Encephalitozoon cuniculi GB-M1]
gi|19069651|emb|CAD26036.1| DNA MISMATCH REPAIR PROTEIN OF THE MUTL/HEXB FAMILY
[Encephalitozoon cuniculi GB-M1]
Length = 630
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 105/175 (60%), Gaps = 15/175 (8%)
Query: 206 KSMFEKMKIVGQFNLGFIIVKYDSD----LFIIDQHATDEKYNFETLQKTTLIKSQKLVV 261
K F +++I+GQFN GFII K + + L +DQHA DE NFE ++KT +K Q ++
Sbjct: 450 KGDFGRLEIIGQFNNGFIITKLEKNKKTYLVAVDQHAADEIRNFEDIKKTFCLKKQSVIS 509
Query: 262 PQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELL 321
P L LT I + ++ DN+ +F +NGF DG +L ++P+ KN T G + ELL
Sbjct: 510 PVKLDLTPIEEMVVSDNVELFERNGFVVK-----DG--MLETVPVYKNQTFGIREFRELL 562
Query: 322 FMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+++ E + R++ AS+ACR SVMIG LS+ +M +V+++ +++PW
Sbjct: 563 EDVKN----EEYEFRKARSIIASKACRTSVMIGDVLSMADMKRIVKSLASLERPW 613
>gi|397645904|gb|EJK77034.1| hypothetical protein THAOC_01161 [Thalassiosira oceanica]
Length = 1120
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 109/221 (49%), Gaps = 48/221 (21%)
Query: 204 IKKSMFEKMKIVGQFNLGFIIVKY-DSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVP 262
+ K F +M I+GQFNLGFI+ + + L+IIDQHA DEK+NFE L + T+I Q L+ P
Sbjct: 859 LAKDDFLRMSIIGQFNLGFILARCQNHHLWIIDQHAADEKWNFERLCRDTVIHEQTLIAP 918
Query: 263 QNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDG--NVLLTSLPMS-------KNTTLG 313
L L+ + + +N+ VF +NGF F FD + + + LT+LP S K G
Sbjct: 919 LPLELSPSEEHTILENMEVFERNGFRFKFDEAKEPRHRLSLTALPHSGSGGDGKKAVQFG 978
Query: 314 REDIEELLFML--------------------------------------QHTNSTEHCRP 335
++D+ L +L ++ S R
Sbjct: 979 KDDVGALCSLLGADGMNTSDGYSNGFGGDGSRIAGVNAVRRFAGMESFSENVVSQSITRL 1038
Query: 336 SRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+ AMFA+RACR S+MIG ALS E G+++ + + + PW
Sbjct: 1039 PKAIAMFANRACRGSIMIGTALSDKEQHGILQKLDQTEIPW 1079
>gi|116195894|ref|XP_001223759.1| hypothetical protein CHGG_04545 [Chaetomium globosum CBS 148.51]
gi|88180458|gb|EAQ87926.1| hypothetical protein CHGG_04545 [Chaetomium globosum CBS 148.51]
Length = 1072
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/139 (46%), Positives = 86/139 (61%), Gaps = 19/139 (13%)
Query: 195 EAESELNRVIKKSMFEKMKIVGQFNLGFIIV-------------KYDSDLFIIDQHATDE 241
+AE +L+ I K+ F KM+IVGQFNLGF++ D +LFIIDQHA+DE
Sbjct: 895 DAEEKLSLKISKTDFAKMRIVGQFNLGFVLAVREAAASPENTPEAADDELFIIDQHASDE 954
Query: 242 KYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSD----DG 297
KYNFE LQ TT ++SQ+LV P+ L LT + + I+ ++LP +NGF D+S
Sbjct: 955 KYNFERLQATTTVQSQRLVQPKTLDLTALEEEIILEHLPALERNGFVVQADTSGARPVGS 1014
Query: 298 NVLLTSLPMSKNTT--LGR 314
V L SLP+S+ TT LGR
Sbjct: 1015 RVQLLSLPLSRETTFSLGR 1033
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K+ NEVY +N Q PFI +I++ DVNV+PDKR I + + +L ++ + + +
Sbjct: 324 KVFNEVYRSYNASQSPFIFADIQLDTHLYDVNVSPDKRTILLHDQGQMLDNLRESLIELF 383
Query: 62 AIGFTVDGNNMNQSMEQDP 80
+ Q+++Q+P
Sbjct: 384 ETQDVTIPVSQAQALKQNP 402
>gi|300122429|emb|CBK23000.2| unnamed protein product [Blastocystis hominis]
Length = 185
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 95/168 (56%), Gaps = 4/168 (2%)
Query: 212 MKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKIN 271
M+++GQFN FI+ + D DL+I+DQHA DEK N+E L I SQKL+ P L L+
Sbjct: 1 MEVIGQFNNSFILCQLDKDLYILDQHACDEKSNYEHLMNEVAIHSQKLIKPIPLELSPDQ 60
Query: 272 QCILKDNLPVFYKNGFEFSFDSSDD-GNVL-LTSLPMSKNTTLGREDIEELLFMLQHTNS 329
+ + N +F +NGF+ S S + G L LTSLP SK T ED EL+ + T
Sbjct: 61 EFTIIHNQAIFKRNGFDISISESQELGQRLQLTSLPASKKYTFSVEDFLELVGTVMETGG 120
Query: 330 TEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTG-LVRNMGRIDQPW 376
R ++ + A+RAC +SV G L+ +M +VR + +D+PW
Sbjct: 121 MAQ-RTPKLAKILATRACHQSVRAGDPLNYPKMVSQIVRRLAELDRPW 167
>gi|409074472|gb|EKM74869.1| hypothetical protein AGABI1DRAFT_19077, partial [Agaricus bisporus
var. burnettii JB137-S8]
Length = 925
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/153 (44%), Positives = 100/153 (65%), Gaps = 13/153 (8%)
Query: 186 ANIDPSKNKEAESE-LNRVIKKSMFEKMKIVGQFNLGFIIV---KYDS-------DLFII 234
A + + N++ +E L+R+I KS F +M++VGQFN GFII K DS DLFI+
Sbjct: 764 AGLSNTNNEDKAAEVLSRIIDKSDFSEMELVGQFNHGFIITRRRKLDSSSSGVMDDLFIV 823
Query: 235 DQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSF-DS 293
DQHA DEKYNFETLQ+TT I+SQ L + L LT + + +N+ + KNGFE ++
Sbjct: 824 DQHAADEKYNFETLQQTTNIQSQTLFRSRPLELTASEELVATENIDILRKNGFEVDVNET 883
Query: 294 SDDGN-VLLTSLPMSKNTTLGREDIEELLFMLQ 325
+ GN ++LT+ P+SK+T +D+EEL+ ++Q
Sbjct: 884 ALPGNRLILTAQPVSKSTVFDTKDLEELINLMQ 916
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 17/71 (23%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRD-----------------SVDVNVTPDKRQIFMD 44
K NEVY FN +Q FI+ + + + DVNV+PDKR IF+
Sbjct: 299 KAFNEVYRSFNPNQSAFIVADFVIPTGVLSAEKNCSAHLMTYSAACDVNVSPDKRTIFLH 358
Query: 45 HEKLLLATVKV 55
E L+A +KV
Sbjct: 359 SESNLIAALKV 369
>gi|330946024|ref|XP_003306681.1| hypothetical protein PTT_19873 [Pyrenophora teres f. teres 0-1]
gi|311315731|gb|EFQ85232.1| hypothetical protein PTT_19873 [Pyrenophora teres f. teres 0-1]
Length = 1003
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 95/181 (52%), Gaps = 22/181 (12%)
Query: 166 ARYARRTVQAQDRCVENRFHANIDPSK----NKEAESELNRVIKKSMFEKMKIVGQFNLG 221
AR+ +A D+ + N ++ PS N + E L+ + KS F +M+IVGQFNLG
Sbjct: 801 ARHLHEIQKAIDKSLANTADKSMVPSSIQLDNSDPEERLSLTVTKSDFHEMRIVGQFNLG 860
Query: 222 FIIV-------KYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCI 274
FII SDLFIIDQHA+DEKYNFE L TT++ Q+LV P L LT + + I
Sbjct: 861 FIIAVRPPTSTAPTSDLFIIDQHASDEKYNFERLAATTVLVPQRLVHPHPLELTAVEKEI 920
Query: 275 LKDNLPVFYKNGFEFSFDSSDDGN-----------VLLTSLPMSKNTTLGREDIEELLFM 323
+ N NGF + D + LTSLPMSK T D+EELL +
Sbjct: 921 ILANEHALTANGFVIDMTTDPDPSADEESNPHNTAAHLTSLPMSKEITFSPTDLEELLAL 980
Query: 324 L 324
+
Sbjct: 981 I 981
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVK 54
K NEVY +N Q PFI +I++ ++ DVNV+PDKR I + + LL +K
Sbjct: 301 KAFNEVYKSYNVTQSPFIFADIQLDTNAYDVNVSPDKRTIMLHDQTALLEKLK 353
>gi|67469317|ref|XP_650637.1| DNA mismatch repair protein PMS1 [Entamoeba histolytica HM-1:IMSS]
gi|56467281|gb|EAL45250.1| DNA mismatch repair protein PMS1, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449707568|gb|EMD47211.1| DNA mismatch repair protein pms2, putative [Entamoeba histolytica
KU27]
Length = 876
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 105/189 (55%), Gaps = 2/189 (1%)
Query: 190 PSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQ 249
P + +E ++ R +KK+ E+++I+GQFN GFII K DL+IIDQHA DE YN+ETL
Sbjct: 661 PERTEEDILKIPRKMKKTTLEEIEIIGQFNKGFIIGKLGYDLYIIDQHAADEIYNYETLL 720
Query: 250 KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSF--DSSDDGNVLLTSLPMS 307
K + Q L+ P + ++ ++ +++N+ +F + GFE +F D V LT +
Sbjct: 721 KKDKLSVQTLISPLQVSMSSDDEIFVQENIGLFPQFGFEVTFREDKEATQRVFLTKVYHR 780
Query: 308 KNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVR 367
G + EL+ L+ + + +FA+ ACR S+MIG +L EM ++
Sbjct: 781 GKNFFGANEFSELVQQLKGCRNDMKVIIKKKHKIFATEACRMSIMIGDSLGREEMKKIIS 840
Query: 368 NMGRIDQPW 376
+ +++PW
Sbjct: 841 RLVGLNKPW 849
>gi|167377899|ref|XP_001734578.1| DNA mismatch repair protein pms2 [Entamoeba dispar SAW760]
gi|165903783|gb|EDR29212.1| DNA mismatch repair protein pms2, putative [Entamoeba dispar
SAW760]
Length = 891
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 105/189 (55%), Gaps = 2/189 (1%)
Query: 190 PSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQ 249
P + +E ++ R +KK+ E+++I+GQFN GFII K DL+IIDQHA DE YN+ETL
Sbjct: 676 PERTEEDILKIPRKMKKTTLEEIEIIGQFNKGFIIGKLGYDLYIIDQHAADEIYNYETLL 735
Query: 250 KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSF--DSSDDGNVLLTSLPMS 307
K + Q L+ P + ++ ++ +++N+ +F + GFE F D V LT +
Sbjct: 736 KKDKLSVQTLISPLQVTMSCDDEIFVQENIELFTQFGFEVIFREDKEVTQRVFLTKVYHR 795
Query: 308 KNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVR 367
G + EL+ L+ + + +FA+ ACR S+MIG +L EM +++
Sbjct: 796 GKNFFGINEFSELVQQLKGCRNDMKVIVKKKHKIFATEACRMSIMIGDSLGREEMKKIIK 855
Query: 368 NMGRIDQPW 376
+ +++PW
Sbjct: 856 RLVELNKPW 864
>gi|428671756|gb|EKX72671.1| DNA mismatch repair protein, putative [Babesia equi]
Length = 757
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 114/458 (24%), Positives = 201/458 (43%), Gaps = 94/458 (20%)
Query: 7 VYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHI------TDS 60
VY QF++ YP ILN+ +VD+N+ PDKR +F+ E +++ +K + T S
Sbjct: 281 VYKQFSSRLYPSFILNLSTDSVNVDINLAPDKRSVFIYSEDIIINKLKAMLFELFMPTRS 340
Query: 61 YAIG-FTVDGNNM---NQSMEQDPS-----SDVDMEKIQRS-----------NSEEVEHE 100
I F VD + +E+D + SD D +++++ N +E +++
Sbjct: 341 QTIPQFNVDILDQFLHKDGVEEDKTIKVKISDEDALRLKKAPKLEEEPVSTKNDQECDNK 400
Query: 101 ----------TIPVPSEDNS------NFSHEANLQQSPETVEPDTPDETIEVID--DMPR 142
+ P P D N S E L++S T P T+ I+ P+
Sbjct: 401 EPRISVESKLSRPAPESDAKRDLSILNLS-EYRLEKSQPTEPIKLPTVTVPQIEVVKKPK 459
Query: 143 LQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCV---ENRFH---------ANIDP 190
+ + P++L D L R R+ + V ++R + + D
Sbjct: 460 ISAPIKSKEPLSLF-----DYLTTRPVRKHCSKKRNVVHIDKSRLYMKKVFKSLLGDNDE 514
Query: 191 SKNKEAESEL---NRVIKKSMFEKMKIVGQFNLGFIIV---------KYDSDLFIIDQHA 238
S +A+++ + ++ S+F++MK+ GQFN GFII +D ++IIDQHA
Sbjct: 515 STASDAQTDSIDDHDLMDPSVFKEMKLCGQFNNGFIITILKDSKIRQGFDYSIYIIDQHA 574
Query: 239 TDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGN 298
DEK FE + IK QKL+ P+ + L+ + + + NGFE S+ + +
Sbjct: 575 ADEKARFEDYNQRVKIKKQKLISPRFIELSPYLSQVAQSHCDTLNYNGFETVTKSAPNRS 634
Query: 299 ---VLLTSLPMSKNTTLGREDIEELLFMLQHT-----------------NSTEHCRPSRI 338
+ + S P L +D+ L L ++ NS RP +I
Sbjct: 635 SHGIYVNSFPQLFGRILSEDDLISFLNDLSNSVATIQDEKQISKQLIWGNSIILPRPIKI 694
Query: 339 RAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
++ A+RAC+ ++ +G ALS +M +++ + + PW
Sbjct: 695 WSILATRACKDAIKLGDALSTDKMRSIIKKLSTLVHPW 732
>gi|269861251|ref|XP_002650338.1| DNA mismatch repair protein PMS1 [Enterocytozoon bieneusi H348]
gi|220066221|gb|EED43713.1| DNA mismatch repair protein PMS1 [Enterocytozoon bieneusi H348]
Length = 578
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 162/358 (45%), Gaps = 79/358 (22%)
Query: 27 RDSVDVNVTPDKRQIFMDH----EKLLLATVKVHITDSYAIGFTVDGNNMNQSMEQDPSS 82
+ + D+NV+PDK +I + E LLL +++ ++++Y S
Sbjct: 275 KTNTDINVSPDKMEIIYHNKQLLESLLLQKIEIFMSNNYF------------------SD 316
Query: 83 DVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPDETIEVIDDMPR 142
VD +KI+ S+ + +E+N++ S N + +T +T I D
Sbjct: 317 SVDYKKIRLSSISQ---------NENNNSISQSQNHSIETFLTQKNTEQDTKPAIID--- 364
Query: 143 LQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKNKEAESELNR 202
+D L + + T+Q E ++
Sbjct: 365 ------------------EDILDIKPVKNTIQFV-------------------KEENIDF 387
Query: 203 VIKKSMFEKMKIVGQFNLGFIIVKY----DSDLFIIDQHATDEKYNFETLQKTTLIKSQK 258
I+K+ F KM+++GQFN GFI+ K S L ++DQHA DE NFE L+ T I Q
Sbjct: 388 TIEKADFNKMEVIGQFNKGFILCKLIKQDKSYLILVDQHAADEIKNFEYLKNTFTISKQS 447
Query: 259 LVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIE 318
LV P L L I + ILK++ + KNG F D +D L ++P K ++D+
Sbjct: 448 LVTPIKLTLNSIQKLILKEHNTILNKNG--FIVDVHNDS-FWLKTVPQYKGHCFSKDDLY 504
Query: 319 ELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+L+ L+ + S + S+ + AS+ACR+S MIG L + ++ +V+N+ ++ PW
Sbjct: 505 DLISKLKDS-SDPNIMCSKFEDIMASKACRQSEMIGTHLPLSKLKNIVQNLSLLNIPW 561
>gi|299738271|ref|XP_001838229.2| DNA mismatch repair protein [Coprinopsis cinerea okayama7#130]
gi|298403231|gb|EAU83597.2| DNA mismatch repair protein [Coprinopsis cinerea okayama7#130]
Length = 918
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 63/145 (43%), Positives = 84/145 (57%), Gaps = 20/145 (13%)
Query: 186 ANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDS----------DLFIID 235
A+I + + +A L RVI+K F M ++GQFNLGFIIV+ DLFI+D
Sbjct: 757 ASISNADDSKASDALARVIEKGDFASMAVIGQFNLGFIIVQRKQPGSEDKPPMDDLFIVD 816
Query: 236 QHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSF---- 291
QHA DEKYNFETLQ TT I++QKL+ P+ L LT ++ + +NL V NGFE
Sbjct: 817 QHAADEKYNFETLQLTTKIQAQKLLRPRPLELTAGDELLAIENLEVLRNNGFEVEMIEEN 876
Query: 292 ------DSSDDGNVLLTSLPMSKNT 310
S G + LT+ P+SK+T
Sbjct: 877 MDGEETPRSQGGRLRLTAQPVSKST 901
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 17/78 (21%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMS-----------------RDSVDVNVTPDKRQIFMD 44
K NEVY FN +Q PF++ + + DS DVNV+PDKR I +
Sbjct: 309 KAFNEVYRTFNANQAPFLVADFIIPTGLLSSLVTPLPSNPSFADSCDVNVSPDKRTILVH 368
Query: 45 HEKLLLATVKVHITDSYA 62
+E L+ +K + D ++
Sbjct: 369 NEDSLITALKEALEDHFS 386
>gi|154344651|ref|XP_001568267.1| mismatch repair protein [Leishmania braziliensis MHOM/BR/75/M2904]
gi|134065604|emb|CAM43374.1| mismatch repair protein [Leishmania braziliensis MHOM/BR/75/M2904]
Length = 840
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 153/312 (49%), Gaps = 28/312 (8%)
Query: 81 SSDVDMEKIQRSNSEEVEHETIP---VPSED---NSNFSHEANLQQSPETVEPDTPDETI 134
+D D ++ RS E+ + +T P P+E+ NF +L S E D+ + I
Sbjct: 515 GNDEDSDERCRSVVEDTKEDTGPPSLKPTEEIDGRENFCCGHDLANSAEGTHSDSVEVEI 574
Query: 135 EVIDDMP---RLQGSYRQSTPVTLSLDIIQDQLKARYARRTV-----QAQDRCVENRFHA 186
+ D R GS T T +++Q+ A V + +DR A
Sbjct: 575 TRLSDEGNQLRGGGSCYHCTCPTFG-ELVQEPFSADPPDAVVLPASTKKRDRASSRTLGA 633
Query: 187 NIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKY-DSDLFIIDQHATDEKYNF 245
+ E +LN K+ F++M+++GQFN GFI+ + D+FI+DQHA+DEKYN+
Sbjct: 634 --------QTEDDLNYYFNKNSFKEMRVIGQFNHGFIVATLPNGDVFIVDQHASDEKYNY 685
Query: 246 ETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLP 305
E L + Q LV+P ++ ++ + ++ +GF+ + SDD +++ SLP
Sbjct: 686 ERLVRAYEATPQPLVLPVSVAMSTHEVDLAMEHKLALQHHGFKVN-RGSDDTKLMVYSLP 744
Query: 306 MSKNTTLGREDIEELL-FMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTG 364
+ + D+ EL+ ++Q+ T+ R + A++ACR S+MIG L++ M
Sbjct: 745 VLPYDVVSASDVMELVQQIVQYGTITKPLRA--VWHSMATKACRSSIMIGTPLTMKRMKL 802
Query: 365 LVRNMGRIDQPW 376
++ +G +DQPW
Sbjct: 803 ILERLGELDQPW 814
>gi|440300566|gb|ELP93013.1| DNA mismatch repair protein mutL, putative [Entamoeba invadens IP1]
Length = 891
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 99/177 (55%), Gaps = 3/177 (1%)
Query: 202 RVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVV 261
R ++K +++++GQFN GFII K DL+IIDQHA DE +NFETL K ++ Q L+
Sbjct: 690 RTLQKMDLAQIEVIGQFNKGFIIGKKGEDLYIIDQHAADEIFNFETLLKNDKLEVQSLIA 749
Query: 262 PQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGN--VLLTSLPMSKNTTLGREDIEE 319
P + L+ ++ +++N+ +F GFE + + VLL+ + K G ++ E
Sbjct: 750 PIKVQLSSDDELYVEENIGIFPHFGFEVLYKEENPATERVLLSKVYSRKKVCFGAKEFLE 809
Query: 320 LLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
L+ L+ E R +FA+ ACR S+M+ L+ +M ++ N+ +++PW
Sbjct: 810 LITQLRQCQD-ESGMVKRKHKIFATEACRMSIMVSDTLTRDQMRRILLNLTTLNKPW 865
>gi|146100947|ref|XP_001468986.1| mismatch repair protein [Leishmania infantum JPCM5]
gi|134073355|emb|CAM72081.1| mismatch repair protein [Leishmania infantum JPCM5]
Length = 840
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 106/180 (58%), Gaps = 5/180 (2%)
Query: 199 ELNRVIKKSMFEKMKIVGQFNLGFII-VKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQ 257
+LN K+ F++M+++GQFN GFII V + D+F++DQHA+DEKYN+E L + Q
Sbjct: 638 DLNHYFTKNSFKEMRVIGQFNHGFIIAVLPNGDVFVVDQHASDEKYNYERLVRAYEATPQ 697
Query: 258 KLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDI 317
LV+P ++ ++ + ++ ++GF+ S SDD +L+ SLP+ + D+
Sbjct: 698 PLVMPVSVAMSAHEVDLAVEHKLTLQQHGFKVS-RGSDDTKLLVYSLPVLPYDVVSASDV 756
Query: 318 EELLFML-QHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
EL+ L Q+ T+ R + A++ACR S+MIG L+V M ++ + ++DQPW
Sbjct: 757 MELVQQLVQYGTITKPLRA--VWHSMATKACRSSIMIGTPLTVKRMKLILERLSQLDQPW 814
>gi|340056567|emb|CCC50900.1| mismatch repair protein [Trypanosoma vivax Y486]
Length = 799
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 101/185 (54%), Gaps = 6/185 (3%)
Query: 194 KEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL 253
++ E EL ++KS F M I GQFN GFII D+F+IDQHA DEK+N+E L +
Sbjct: 591 EQTEEELTLRLEKSCFTNMTIHGQFNHGFIIASLHDDVFVIDQHAADEKHNYECLLSRYV 650
Query: 254 IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLG 313
K Q LV P L + + + ++ K+GF S DD + + S+P+ +
Sbjct: 651 SKLQPLVCPVLLSVDPRSVDLAIEHSRELRKHGF-IVKRSDDDDKLHVLSVPLLPYEVVK 709
Query: 314 REDIEELLFMLQHTNSTEHCRPSRI--RAMFASRACRKSVMIGRALSVGEMTGLVRNMGR 371
ED+ ELL L + +P R R+M A++ACR S+MIGR L EMT +V +
Sbjct: 710 AEDVIELLQQL--IDYGMIVKPMRCVWRSM-ATKACRTSIMIGRVLDEKEMTTIVNRLSG 766
Query: 372 IDQPW 376
+DQPW
Sbjct: 767 LDQPW 771
>gi|398023179|ref|XP_003864751.1| mismatch repair protein PMS1, putative [Leishmania donovani]
gi|322502987|emb|CBZ38071.1| mismatch repair protein PMS1, putative [Leishmania donovani]
Length = 840
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 106/180 (58%), Gaps = 5/180 (2%)
Query: 199 ELNRVIKKSMFEKMKIVGQFNLGFII-VKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQ 257
+LN K+ F++M+++GQFN GFII V + D+F++DQHA+DEKYN+E L + Q
Sbjct: 638 DLNHYFTKNSFKEMRVIGQFNHGFIIAVLPNGDVFVVDQHASDEKYNYERLVRAYEATPQ 697
Query: 258 KLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDI 317
LV+P ++ ++ + ++ ++GF+ S SDD +L+ SLP+ + D+
Sbjct: 698 PLVMPVSVAMSAHEVDLAVEHKLTLQQHGFKVS-RGSDDTKLLVYSLPVLPYDVVSASDV 756
Query: 318 EELLFML-QHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
EL+ L Q+ T+ R + A++ACR S+MIG L+V M ++ + ++DQPW
Sbjct: 757 MELVQQLVQYGTITKPLRA--VWHSMATKACRSSIMIGTPLTVKRMKLILERLSQLDQPW 814
>gi|389594671|ref|XP_003722558.1| mismatch repair protein [Leishmania major strain Friedlin]
gi|323363786|emb|CBZ12792.1| mismatch repair protein [Leishmania major strain Friedlin]
Length = 840
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 105/180 (58%), Gaps = 5/180 (2%)
Query: 199 ELNRVIKKSMFEKMKIVGQFNLGFII-VKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQ 257
+LN K+ F++M+++GQFN GFII V + D+F++DQHA+DEKYN+E L + Q
Sbjct: 638 DLNHYFTKNSFKEMRVIGQFNHGFIIAVLPNGDVFVVDQHASDEKYNYERLVRAYEATPQ 697
Query: 258 KLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDI 317
LV+P ++ ++ + ++ +GF+ S SDD +L+ SLP+ + D+
Sbjct: 698 PLVMPVSVAMSAHEVDLAVEHKLALQHHGFKVS-RGSDDTKLLVYSLPVLPYDVVSASDV 756
Query: 318 EELLFML-QHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
EL+ L Q+ T+ R + A++ACR S+MIG L+V M ++ + ++DQPW
Sbjct: 757 MELVQQLVQYGTITKPLRA--VWHSMATKACRSSIMIGTPLTVKRMKLILERLSQLDQPW 814
>gi|387594125|gb|EIJ89149.1| hypothetical protein NEQG_00968 [Nematocida parisii ERTm3]
gi|387595675|gb|EIJ93298.1| hypothetical protein NEPG_01640 [Nematocida parisii ERTm1]
Length = 625
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 100/174 (57%), Gaps = 11/174 (6%)
Query: 209 FEKMKIVGQFNLGFIIVKYDSD----LFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQN 264
K+ IVGQFN GFII + ++IIDQHA DE N+E L+ T + K QKL+ P
Sbjct: 436 LSKLVIVGQFNNGFIICTLAKEGNIHMYIIDQHAADEAVNYEQLRSTVVYKKQKLIQPMK 495
Query: 265 LHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFML 324
+ LT+ + ++++N+ +NGF + + ++ L +P ++ G ++ E++ +
Sbjct: 496 VKLTEYDMHVIRENMEYVKRNGFGLNAELTE-----LIEVPSYEDRIYGESELLEVIESI 550
Query: 325 QHTNSTE--HCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+ N E H + +R + AS+ACR S+MIG L++ +M+ +V ++ + +PW
Sbjct: 551 KEDNIEEGKHIIFTELRRLLASKACRSSIMIGDVLNMQQMSKIVSSLSKTTRPW 604
>gi|401429358|ref|XP_003879161.1| mismatch repair protein [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322495411|emb|CBZ30715.1| mismatch repair protein [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 840
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 104/180 (57%), Gaps = 5/180 (2%)
Query: 199 ELNRVIKKSMFEKMKIVGQFNLGFII-VKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQ 257
+LN K+ F++M+++GQFN GFII V + D+F++DQHA+DEKYN+E L + Q
Sbjct: 638 DLNHYFNKNSFKEMRVIGQFNHGFIIAVLPNGDVFVVDQHASDEKYNYERLVRAYEATPQ 697
Query: 258 KLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDI 317
LV+P + ++ + ++ +GF+ S SDD +L+ SLP+ + D+
Sbjct: 698 PLVMPVPVAMSAHEVDLAVEHKLALQHHGFKVS-RGSDDTKLLVYSLPVLPYDVVSASDV 756
Query: 318 EELLFML-QHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
EL+ L Q+ T+ R + A++ACR S+MIG L+V M ++ + ++DQPW
Sbjct: 757 MELVQQLVQYGTITKPLRA--VWHSMATKACRSSIMIGTPLTVKRMKLILERLSQLDQPW 814
>gi|154290225|ref|XP_001545711.1| hypothetical protein BC1G_15789 [Botryotinia fuckeliana B05.10]
Length = 780
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 53/112 (47%), Positives = 71/112 (63%), Gaps = 13/112 (11%)
Query: 196 AESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDL-------------FIIDQHATDEK 242
AE L+ I KS F KMKI+GQFNLGFI+ +L FIIDQH++DEK
Sbjct: 666 AEERLSLTISKSDFAKMKIIGQFNLGFILASKAPELTTENSGIQTADNVFIIDQHSSDEK 725
Query: 243 YNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSS 294
YNFE LQ TT+++SQ+LV P+ L LT + + I+ +NL + +NGF + D S
Sbjct: 726 YNFERLQATTIVQSQRLVYPKTLSLTALEEEIVAENLDILEQNGFVLTIDQS 777
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 2 KLVNEVYHQFNNH---QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHIT 58
K NEVY +N Q PFI NIE+ DVNV+PDKR I + + +L +K +
Sbjct: 121 KAFNEVYKSYNGWGSTQSPFIFANIELDTHLYDVNVSPDKRTILLHDQSRMLENLKTALA 180
>gi|164662239|ref|XP_001732241.1| hypothetical protein MGL_0016 [Malassezia globosa CBS 7966]
gi|159106144|gb|EDP45027.1| hypothetical protein MGL_0016 [Malassezia globosa CBS 7966]
Length = 844
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 76/126 (60%), Gaps = 6/126 (4%)
Query: 193 NKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDS----DLFIIDQHATDEKYNFETL 248
N+ A + + RVI K F M++VGQFNLGFII + D+ DLFIIDQHA DEK+NFE L
Sbjct: 711 NENAAAVMERVIPKKDFYTMRVVGQFNLGFIIARRDTPCMDDLFIIDQHAADEKHNFEDL 770
Query: 249 QKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFD--SSDDGNVLLTSLPM 306
++ T I SQ LVVPQ + L ++ + ++ KNGF+ D + V L S P+
Sbjct: 771 ERHTKIYSQPLVVPQRIELAPTDELVAHEHREWLSKNGFDIDLDENAPPGSRVRLLSKPV 830
Query: 307 SKNTTL 312
SK T
Sbjct: 831 SKGTVF 836
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 34/53 (64%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVK 54
++ N+VY FN+ QYP ++ N+ + + DVNV+PDKR +++ E L ++
Sbjct: 290 QICNQVYKMFNSTQYPCVVANLVIGTHTYDVNVSPDKRTLYVHQEAALFDRIR 342
>gi|403370380|gb|EJY85051.1| ATP-binding protein required for mismatch repair in mitosis and
meiosis [Oxytricha trifallax]
Length = 1344
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 103/205 (50%), Gaps = 27/205 (13%)
Query: 200 LNRVIKKSMFEKMKIVGQFNLGFIIVKYD-SDLFIIDQHATDEKYNFETLQKTTLIKSQK 258
L + K F K+KI+GQFN GF+I + +DLFI+DQHA DE++N E IKSQ
Sbjct: 223 LRKKFAKKEFLKLKIIGQFNDGFVIATLNKNDLFILDQHACDERFNLEKFTSEVKIKSQP 282
Query: 259 LVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGN------------VLLTSLPM 306
L ++ + ++++ L +F GF+F D N + LT+LP
Sbjct: 283 LAKHLITEVSLSSYQLIQNYLSMFEAYGFKFYVKEKDLENLNTPLFQVETVSLNLTNLPT 342
Query: 307 SKNTTLGREDIEELLFMLQHTNST--------------EHCRPSRIRAMFASRACRKSVM 352
S +T G D L+ L++ ++ E+ P +I A+ A ACRK+VM
Sbjct: 343 SNDTQFGPSDFHNLITSLRNFDANKELQQKTRTQQELFEYLMPKKIHAVLALNACRKAVM 402
Query: 353 IGRALSVGEMTGLVRNMGRIDQPWV 377
IG+ L +M LV ++ ++ PW+
Sbjct: 403 IGKKLDSRKMRSLVDHLYKLKDPWI 427
>gi|300708140|ref|XP_002996256.1| hypothetical protein NCER_100672 [Nosema ceranae BRL01]
gi|239605541|gb|EEQ82585.1| hypothetical protein NCER_100672 [Nosema ceranae BRL01]
Length = 698
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 107/184 (58%), Gaps = 15/184 (8%)
Query: 197 ESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSD----LFIIDQHATDEKYNFETLQKTT 252
+ E++ V+KK+ F M+I+GQFN GFII + + L I+DQHA DE +N+E ++K
Sbjct: 508 QCEISLVLKKNDFFDMEIIGQFNKGFIITRLVKNDKIYLIIVDQHAADEIFNYENIKKNA 567
Query: 253 LIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTL 312
I QK++VP L L+ I++ +++N+ F GF D N+ L ++P+ K
Sbjct: 568 KILKQKVLVPIELKLSPIDKLFVEENIVSFSIYGF-------DIENMKLLTVPVFKGEEF 620
Query: 313 GREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRI 372
D ELL + N E ++I+ + AS+ACR SVM+G +L+ ++ +V+ + +
Sbjct: 621 NLNDFYELLDNFK--NGGEGL--TKIQKIMASKACRMSVMVGDSLNKAKLEKIVKRLKDL 676
Query: 373 DQPW 376
++PW
Sbjct: 677 EKPW 680
>gi|195583624|ref|XP_002081617.1| GD25620 [Drosophila simulans]
gi|194193626|gb|EDX07202.1| GD25620 [Drosophila simulans]
Length = 138
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/106 (52%), Positives = 68/106 (64%), Gaps = 3/106 (2%)
Query: 274 ILKDNLPVFYKNGFEFSFD--SSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTE 331
+L +++ VF KNGF+F D + V L P SK G+EDI+EL+FMLQ
Sbjct: 2 VLLNHIDVFEKNGFKFEVDHEAPATKKVRLLGKPHSKRWEFGKEDIDELIFMLQDAPEGT 61
Query: 332 HCRPSRIRAMFASRACRKSVMIGRALSVG-EMTGLVRNMGRIDQPW 376
CRPSR+RAMFASRACRKSVMIG ALS M L+ MG I+QPW
Sbjct: 62 ICRPSRVRAMFASRACRKSVMIGTALSRNTTMRRLITQMGEIEQPW 107
>gi|429962799|gb|ELA42343.1| hypothetical protein VICG_00441 [Vittaforma corneae ATCC 50505]
Length = 703
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 98/178 (55%), Gaps = 15/178 (8%)
Query: 203 VIKKSMFEKMKIVGQFNLGFI--IVKYDSDLFII--DQHATDEKYNFETLQKTTLIKSQK 258
V KS F++M I+GQFN GFI I+K + F+I DQHA DE YNFE L+ T +K Q+
Sbjct: 513 VFDKSDFKEMHIIGQFNQGFILCILKKGNSTFLIAVDQHAADEIYNFERLKCTFKLKKQR 572
Query: 259 LVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIE 318
L+ P L + I + +++++ NGF S + LL S P+ + ED
Sbjct: 573 LLTPIQLEFSPIQRLLIEEHKQTLEDNGFVISEN-------LLLSFPVYQGVFFSVEDFY 625
Query: 319 ELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+L + S P + + + AS+ACR S+MIG +LS+ EM ++ N+ +D PW
Sbjct: 626 SIL----DSISKGILVPEKFKNIMASKACRSSIMIGTSLSMKEMRRILDNLSVLDLPW 679
>gi|71027751|ref|XP_763519.1| DNA mismatch repair protein PMS1 [Theileria parva strain Muguga]
gi|68350472|gb|EAN31236.1| DNA mismatch repair protein PMS1, putative [Theileria parva]
Length = 791
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 102/211 (48%), Gaps = 42/211 (19%)
Query: 208 MFEKMKIVGQFNLGFIIVK---------YDSDLFIIDQHATDEKYNFETLQKTTLIKSQK 258
+F++M+++GQFN FII K Y+ L++IDQHA DEK FE L KT I Q+
Sbjct: 556 VFDEMELIGQFNKSFIITKLTFPEVKSKYNFSLYVIDQHAADEKARFERLNKTVKINKQR 615
Query: 259 LVVPQNLHLTKINQCILKDNLPVFYKNGF------EFSFDSSDDGNVLLTS--------- 303
L+ P+ + L+ + ++++ V NGF E F +D ++ +TS
Sbjct: 616 LIYPKLIELSPFLTQVAENSMNVLLSNGFDVRVCREKEFLVFNDEDLSMTSAYTEKIGRG 675
Query: 304 -----LPMSKNTTLGREDIEELLFMLQHTNSTEHC-------------RPSRIRAMFASR 345
LP LG +D + L L T E+ RP +I ++ ASR
Sbjct: 676 VYVHTLPQILGKVLGEDDFVDFLNELSATEYVENSKQSEFIWGLGNTPRPHKIWSILASR 735
Query: 346 ACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
AC+ SV G L+ G+M +VR MG + PW
Sbjct: 736 ACKSSVRAGDGLTNGQMKNIVRRMGTLIHPW 766
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 76/147 (51%), Gaps = 21/147 (14%)
Query: 4 VNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAI 63
++ ++ F++ P ILN+ M+ D +DVN++PDKR ++ E ++ T KV YAI
Sbjct: 277 ISAIFSHFSSKSKPSFILNLTMNYDHIDVNISPDKRSAYIYSEDYIIRTFKVSF---YAI 333
Query: 64 GF-----------TVDGNNMNQSMEQDPSSDVDMEKIQRSNSEE-VEHETIPVPSEDNSN 111
T + + +N + SDV+++ ++S+ E V +TI P + N++
Sbjct: 334 LLIENLYEILKPKTSNLSQINSEILTQFISDVNVKHEEKSSKRELVFTDTINPPKKTNTS 393
Query: 112 FSHEANLQQSPETVEPDTPDETIEVID 138
S A +P T+ PD+T+E ++
Sbjct: 394 GSVTA----APVTI--TIPDDTVESVE 414
>gi|119575457|gb|EAW55055.1| PMS2 postmeiotic segregation increased 2 (S. cerevisiae) [Homo
sapiens]
Length = 725
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 45/79 (56%), Positives = 62/79 (78%)
Query: 183 RFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEK 242
+F A I P +N+ AE EL + I K+MF +M+I+GQFNLGFII K + D+FI+DQHATDEK
Sbjct: 647 KFRAKICPGENQAAEDELRKEISKTMFAEMEIIGQFNLGFIITKLNEDIFIVDQHATDEK 706
Query: 243 YNFETLQKTTLIKSQKLVV 261
YNFE LQ+ T+++ Q+L+
Sbjct: 707 YNFEMLQQHTVLQGQRLIA 725
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 57/85 (67%), Gaps = 8/85 (9%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
+LVNEVYH +N HQYPF++LNI + + VD+NVTPDKRQI + EKLLLA +K +
Sbjct: 304 RLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSL---- 359
Query: 62 AIG-FTVDGNNMNQSMEQDPSSDVD 85
IG F D N +N S Q P DV+
Sbjct: 360 -IGMFDSDVNKLNVS--QQPLLDVE 381
>gi|261331832|emb|CBH14826.1| mismatch repair protein PMS1, putative [Trypanosoma brucei
gambiense DAL972]
Length = 788
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 99/185 (53%), Gaps = 6/185 (3%)
Query: 194 KEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL 253
K+ E EL + K F+ M + GQFN GFI+ D ++F+IDQHA DEK N+E L +
Sbjct: 580 KQTEEELTLYLGKESFKNMVVHGQFNHGFIVTSLDDNIFVIDQHAADEKGNYEHLMSHYV 639
Query: 254 IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLT-SLPMSKNTTL 312
+ Q L P + + + D+ ++G F SDD N LL S+P+ +
Sbjct: 640 ARPQPLFSPVPVSMEPQAVDLAVDHAEELRQHG--FIVQRSDDTNKLLVLSVPVIPYEVV 697
Query: 313 GREDIEELLFMLQHTNSTEHCRPSR-IRAMFASRACRKSVMIGRALSVGEMTGLVRNMGR 371
+++ EL+ L H N+ +P R + A++ACR S+M+G LS +M +V MG
Sbjct: 698 DPQNVVELIRQLVHYNTI--SKPMRCVWHSMATKACRSSIMVGTMLSEKKMRSVVDRMGE 755
Query: 372 IDQPW 376
++QPW
Sbjct: 756 LEQPW 760
>gi|402468764|gb|EJW03872.1| DNA mismatch repair protein MutL [Edhazardia aedis USNM 41457]
Length = 1056
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 100/181 (55%), Gaps = 16/181 (8%)
Query: 204 IKKSMFEKMKIVGQFNLGFII---VKYDSDLFII-DQHATDEKYNFETLQKTTLIKSQKL 259
+KKS + I+GQFN GFI+ V ++ +L II DQHA DE +ETL+ +K Q+L
Sbjct: 863 VKKSDLGNLNIIGQFNHGFILSKLVNFEKELLIIVDQHAADEIATYETLENDFYLKKQRL 922
Query: 260 VVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGRED--- 316
+VP ++LT ++ + N+ + +NGF+ D N LT +P+ KN ED
Sbjct: 923 IVPLPINLTLADEIFINSNIQILRRNGFDL------DENYNLTYVPIYKNNIFTAEDFWD 976
Query: 317 -IEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQP 375
+EE+ + C+ +I+ + AS+ACR S MIG+ L+ +M +++ + + P
Sbjct: 977 LVEEIKIAPIYDKKYIFCK--KIKEIMASKACRSSKMIGQHLTHIDMEKIIKKLSTLRHP 1034
Query: 376 W 376
W
Sbjct: 1035 W 1035
>gi|71746104|ref|XP_827624.1| mismatch repair protein PMS1 [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|13027781|gb|AAK08649.1| putative mismatch repair protein PMS1 [Trypanosoma brucei]
gi|70831789|gb|EAN77294.1| mismatch repair protein PMS1, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 788
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 99/185 (53%), Gaps = 6/185 (3%)
Query: 194 KEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL 253
K+ E EL + K F+ M + GQFN GFI+ D ++F+IDQHA DEK N+E L +
Sbjct: 580 KQTEEELTLYLGKESFKNMVVHGQFNHGFIVTSLDDNIFVIDQHAADEKGNYEHLMSHYV 639
Query: 254 IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLT-SLPMSKNTTL 312
+ Q L P + + + D+ ++G F SDD N LL S+P+ +
Sbjct: 640 ARPQPLFSPVPVSMEPQAVDLAVDHAEELRQHG--FIVQRSDDTNKLLVLSVPVIPYEVV 697
Query: 313 GREDIEELLFMLQHTNSTEHCRPSR-IRAMFASRACRKSVMIGRALSVGEMTGLVRNMGR 371
+++ EL+ L H N+ +P R + A++ACR S+M+G LS +M +V MG
Sbjct: 698 DPQNVVELIRQLVHYNTI--SKPMRCVWHSMATKACRSSIMVGTMLSEKKMRSVVDRMGE 755
Query: 372 IDQPW 376
++QPW
Sbjct: 756 LEQPW 760
>gi|327179552|gb|AEA30123.1| mismatch repair protein [Pentatrichomonas hominis]
Length = 555
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 100/173 (57%), Gaps = 5/173 (2%)
Query: 204 IKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQ 263
I+ +MF+ M+I+GQ+N FII + D++ IDQHA E NFE L+K T+ K Q L+ P
Sbjct: 366 IETAMFKDMEIIGQWNRSFIITRLGCDIYAIDQHAACEAQNFEKLRKDTITK-QTLLQPY 424
Query: 264 NLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFM 323
LH++ ++N + GF+F+ +D ++ +T++P G +D+ ELL +
Sbjct: 425 ILHVSPAELESAEENREKCSEYGFDFTI---EDDHLSVTTIPAKITVASGVDDLLELLSI 481
Query: 324 LQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
L+ + ++ S +A+ + RAC SV++G A+S +M L+ MG D PW
Sbjct: 482 LKESPGSQPMTSSARKAL-SYRACHSSVVVGDAMSNQQMKALLDRMGGSDFPW 533
>gi|399216164|emb|CCF72852.1| unnamed protein product [Babesia microti strain RI]
Length = 763
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 103/209 (49%), Gaps = 28/209 (13%)
Query: 194 KEAESELNRVIKKSMFEKMKIVGQFNLGFIIVK---YDSD------LFIIDQHATDEKYN 244
K A S + I+K F+ M+I GQFN GFII K YD + LFIIDQHA DEK
Sbjct: 525 KNAISHDPKRIEKRTFKMMEICGQFNKGFIITKLASYDRNDKFKYSLFIIDQHAADEKAR 584
Query: 245 FETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSL 304
FETL K I QKL+ P + + + + + V NGF SSD G + + +
Sbjct: 585 FETLNKRVKINCQKLIQPVFVKVPPSHLAVGDRSYSVLECNGFTMC-GSSDHG-LYIATF 642
Query: 305 PMSKNTTLGREDIEELLFMLQHTNS---------TEHC--------RPSRIRAMFASRAC 347
P+ + LG D E L + N+ + H RP +I ++ A+RAC
Sbjct: 643 PVLFSHVLGENDFLEFLEKIYSFNAIYGKDLNGTSSHVWDYFQSTPRPPKIWSILANRAC 702
Query: 348 RKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
R +V IG L+ G+M + +G +D PW
Sbjct: 703 RSAVKIGDDLNRGKMEQIKDTLGDLDHPW 731
>gi|389581921|dbj|GAB64642.1| DNA mismatch repair protein PMS2 [Plasmodium cynomolgi strain B]
Length = 1223
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 119/297 (40%), Gaps = 103/297 (34%)
Query: 171 RTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYD-- 228
R V + E+ +NID E + + K ++FEK+KI GQFN GF+I K D
Sbjct: 868 RNVSGEGSSGEDISFSNID-------EQKKDLYFKSNLFEKLKICGQFNKGFVISKIDLL 920
Query: 229 -------------------------------SDLFIIDQHATDEKYNFETLQKTTLIKSQ 257
LFIIDQHA DEK NFE K +KSQ
Sbjct: 921 YFQRGRREKVVNPVGSGGKEEEEIEPQGNSSYALFIIDQHAADEKSNFEKYNKIFTMKSQ 980
Query: 258 KLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSF--------------------DSSDDG 297
KL+ +L L+ I++ NL +F NGF+ D++D G
Sbjct: 981 KLISKIDLELSPAQIYIIEKNLEIFLHNGFDVEIVEEPVQKRRRVKAADSTDATDAADAG 1040
Query: 298 -------NVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEH------------------ 332
V L SLP+ L ++E+ + +L H TEH
Sbjct: 1041 EGALMQVKVYLLSLPVFNGRIL---EVEDFMSLLHHL--TEHPITYDKASFQMFIRNKGQ 1095
Query: 333 -------------CRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
RP ++ + AS+ACR ++M+G+ L+V EM + + + + PW
Sbjct: 1096 PNKTTDTWFNYNFPRPQKVWRILASKACRNAIMVGKTLNVAEMIKIKKKLSVLKNPW 1152
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHIT 58
K++N +Y +FN+ YP II NI + D+NVTPDKR++F +E L +K+ +
Sbjct: 278 KIINSIYREFNSRLYPIIICNILSDTKNFDINVTPDKREVFFIYENELCEKIKISLV 334
>gi|407860834|gb|EKG07534.1| mismatch repair protein MLH1, putative [Trypanosoma cruzi]
Length = 774
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 103/195 (52%), Gaps = 20/195 (10%)
Query: 191 SKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQK 250
S ++ E++L + KS F++M I GQFN GFI+ D+F+IDQHA DEK+N+E L
Sbjct: 563 SLTEQTENQLATYLDKSSFKEMIIHGQFNHGFILASLGDDMFVIDQHAADEKFNYECLLS 622
Query: 251 TTLIKSQKLVV-------PQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLT- 302
+ Q L+ P ++ L ++ L+ + F + +D N LL
Sbjct: 623 QYSARPQPLLAAVSVSMDPHDVDLAVLHSEELRQH---------GFIVERGEDANKLLVY 673
Query: 303 SLPMSKNTTLGREDIEELLFMLQ-HTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGE 361
S+P+ + +G DI EL+ + + N T+ R + A++ACR S+MIG ALS
Sbjct: 674 SVPVLQYEAVGPHDIVELVQQIALYGNITKPLR--SLWHSMATKACRSSIMIGTALSEKT 731
Query: 362 MTGLVRNMGRIDQPW 376
M +V +G ++QPW
Sbjct: 732 MRSVVSRLGELEQPW 746
>gi|71649195|ref|XP_813339.1| mismatch repair protein PMS1 [Trypanosoma cruzi strain CL Brener]
gi|70878213|gb|EAN91488.1| mismatch repair protein PMS1, putative [Trypanosoma cruzi]
Length = 774
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 103/195 (52%), Gaps = 20/195 (10%)
Query: 191 SKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQK 250
S ++ E+++ + KS F++M I GQFN GFI+ D+F+IDQHA DEK+N+E L
Sbjct: 563 SLTEQTENQIATYLDKSSFKEMIIHGQFNHGFILASLGDDMFVIDQHAADEKFNYECLLS 622
Query: 251 TTLIKSQKLVV-------PQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLT- 302
+ Q L+ P ++ L ++ L+ + F+ +D N LL
Sbjct: 623 QYKARPQPLLAAVSVSMDPHDVDLAVLHSEELRQH---------GFTVKRGEDANKLLVY 673
Query: 303 SLPMSKNTTLGREDIEELLFMLQ-HTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGE 361
S+P+ + +G DI EL+ + + N T+ R + A++ACR S+MIG ALS
Sbjct: 674 SVPVLQYEAVGPHDIVELVQQIALYGNITKPLR--SLWHSMATKACRSSIMIGTALSEKT 731
Query: 362 MTGLVRNMGRIDQPW 376
M +V +G ++QPW
Sbjct: 732 MRSVVSRLGELEQPW 746
>gi|378756045|gb|EHY66070.1| hypothetical protein NERG_00766 [Nematocida sp. 1 ERTm2]
Length = 619
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 97/173 (56%), Gaps = 14/173 (8%)
Query: 212 MKIVGQFNLGFIIVKYDSD----LFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHL 267
+KIVGQFN GFI+ D ++IIDQHA DE N+E L+ T + K QKL+ P + +
Sbjct: 434 LKIVGQFNNGFILCTLVKDSNIHMYIIDQHAADEAVNYEYLRSTIVYKRQKLIHPIAIGI 493
Query: 268 TKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHT 327
++ + +L++N K+GF + + + + P +NT G +++ E++ ++
Sbjct: 494 SEYDAHLLRENTRCIEKHGFILNEEKTQ-----IIEAPAYENTIFGSQELLEIVERIKEG 548
Query: 328 NSTEHCRP----SRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
E P + +R + AS+ACR S+MIG L++ +M +V+ + + +PW
Sbjct: 549 RFKEE-EPVIVFTSLRKVLASKACRSSIMIGDVLNMQQMNKIVKGLSKTTRPW 600
>gi|68071917|ref|XP_677872.1| mismatch repair protein [Plasmodium berghei strain ANKA]
gi|56498149|emb|CAI04678.1| mismatch repair protein pms1 homologue, putative [Plasmodium berghei]
Length = 1075
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 107/260 (41%), Gaps = 84/260 (32%)
Query: 205 KKSMFEKMKIVGQFNLGFIIVKYD----------------------------------SD 230
K ++F+K+KI GQFN GFII K D
Sbjct: 750 KSNLFKKLKICGQFNKGFIISKIDLLYFKNGNSKSENVKMENNRNEAEENEYIERKNNYA 809
Query: 231 LFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFS 290
LFIIDQHA DEK NFE K +KSQKL+ L L+ I++ N +F +NGFE
Sbjct: 810 LFIIDQHAADEKSNFEKYNKIFTMKSQKLINKIELELSPAQIHIIEKNFVIFLRNGFEIE 869
Query: 291 F-------------DSSDDGNVL-----------LTSLPMSKNTTLGREDIEELLFMLQH 326
D + D N++ L SLP+ L D LL+ L +
Sbjct: 870 IIDEPINKKRKINNDENMDNNIINEEALMEMKVYLLSLPVFNGKILEVVDFMSLLYHLSN 929
Query: 327 --------------------TNSTEHC------RPSRIRAMFASRACRKSVMIGRALSVG 360
T++TE RP ++ + AS+ACR +VM+G+ L++
Sbjct: 930 NPIIFDKQIDGSFLKNNKKLTDNTEMWFNYNFPRPQKVWKILASKACRNAVMVGKTLNIS 989
Query: 361 EMTGLVRNMGRIDQPWVSMG 380
EM + + + + PW G
Sbjct: 990 EMITIKKKLSVLKNPWNPHG 1009
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHI 57
K++N +Y +FN+ YP II NI ++D+NVTPDKR++F E L +K +
Sbjct: 277 KIINTIYREFNSRLYPIIICNILSDSKNIDINVTPDKREVFFTFENELCEEIKTEL 332
>gi|452823372|gb|EME30383.1| DNA mismatch repair protein PMS2 [Galdieria sulphuraria]
Length = 687
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 85/153 (55%), Gaps = 3/153 (1%)
Query: 195 EAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQK-TTL 253
+AE EL +V+ K F M+I+GQFN GFII K+ LFI+DQHA DE+YNFE L K
Sbjct: 535 DAEMELRQVLHKDDFLSMQIIGQFNQGFIIAKWCGHLFIVDQHAADERYNFEYLHKDQGE 594
Query: 254 IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSD-DGN-VLLTSLPMSKNTT 311
+ Q L+ P +HL+ + +L ++L GF FS D GN + L +P + TT
Sbjct: 595 LPCQPLIQPLTMHLSAEEEWLLINHLDWIEPWGFRFSVDMDKMPGNRISLLQVPFHEKTT 654
Query: 312 LGREDIEELLFMLQHTNSTEHCRPSRIRAMFAS 344
G +D+ E++ L++ + R MF S
Sbjct: 655 FGTDDVLEMIHQLRNREAISKQRRYPFIGMFLS 687
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 3 LVNEVYH-QFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
L +Y Q H +P + L+IE+ + D+N+ DKRQ+F+ LL + + +
Sbjct: 277 LATRIYQKQVGQHSFPLLFLHIELEDGTFDINIATDKRQLFIHDADRLLEACTAYFCELW 336
Query: 62 AI 63
+
Sbjct: 337 KV 338
>gi|342183724|emb|CCC93204.1| mismatch repair protein [Trypanosoma congolense IL3000]
Length = 787
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 94/184 (51%), Gaps = 4/184 (2%)
Query: 194 KEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL 253
+++E EL + K F+ M + GQFN GFI+ ++F+IDQHA DEK+N+E L +
Sbjct: 579 EQSEKELKLHLDKCSFKDMVVHGQFNHGFIVTSLGDNIFVIDQHAADEKFNYENLMSRYV 638
Query: 254 IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLG 313
K Q L+ P + + + DN ++GF DD +L+ S+P+ +
Sbjct: 639 AKPQPLISPVAVPMEPQTVDLAIDNSDELQRHGF-IVRRGEDDNRLLVHSVPVLPYEVVK 697
Query: 314 REDIEELLFMLQHTNSTEHCRPSR-IRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRI 372
D+ ELL L RP R + A++ACR S+MIG LS M +V + +
Sbjct: 698 PHDVMELLNQLTLYGVIN--RPMRCVWHSMATKACRSSIMIGTVLSEKTMRSVVSRLSEL 755
Query: 373 DQPW 376
+QPW
Sbjct: 756 EQPW 759
>gi|312087899|ref|XP_003145652.1| hypothetical protein LOAG_10077 [Loa loa]
Length = 691
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 76/119 (63%), Gaps = 3/119 (2%)
Query: 260 VVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSD--DGNVLLTSLPMSKNTTLGREDI 317
+ P+ L L + + IL+DN+ +F NGFEF FD + LLT++P+ ++ DI
Sbjct: 553 ISPRVLDLGVVKEAILRDNVDIFNYNGFEFQFDDEEVVGKRALLTAIPVLQSWQFSISDI 612
Query: 318 EELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+E+L +L + RP+++R +FASRACRKSVMIG +L++ M +VR++G +D PW
Sbjct: 613 DEMLSVLCDFPGMMY-RPAKLRKLFASRACRKSVMIGSSLTMAHMEKIVRHLGTLDHPW 670
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 25/35 (71%)
Query: 28 DSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYA 62
+S+DVNV+PDKR +F + EK L A ++ + ++A
Sbjct: 243 ESIDVNVSPDKRSVFFEREKELFALLRASLLATFA 277
>gi|407408006|gb|EKF31592.1| mismatch repair protein MLH1, putative [Trypanosoma cruzi
marinkellei]
Length = 774
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 99/194 (51%), Gaps = 18/194 (9%)
Query: 191 SKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQK 250
S ++ E++L + KS F++M I GQFN GFI+ D+F+IDQHA DEK+N+E L
Sbjct: 563 SLTEQTENQLATYLDKSSFKEMIIHGQFNHGFILASLGDDMFVIDQHAADEKFNYECLLM 622
Query: 251 TTLIKSQKLVV-------PQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLT- 302
+ Q L+ P ++ L ++ L+ + F +D N LL
Sbjct: 623 QYTARPQPLLAAVSVSMDPHDVDLAVLHSEELRQH---------GFIVKRGEDANKLLVY 673
Query: 303 SLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEM 362
S+P+ + +G DI EL+ + S +M A++ACR S+MIG ALS M
Sbjct: 674 SVPVLQYEAVGPHDIVELVQQIALYGKITKPLRSLWHSM-ATKACRSSIMIGTALSEKTM 732
Query: 363 TGLVRNMGRIDQPW 376
+V +G ++QPW
Sbjct: 733 RSVVSRLGELEQPW 746
>gi|156095127|ref|XP_001613599.1| DNA mismatch repair protein PMS2 [Plasmodium vivax Sal-1]
gi|148802473|gb|EDL43872.1| DNA mismatch repair protein PMS2, putative [Plasmodium vivax]
Length = 1264
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 109/280 (38%), Gaps = 105/280 (37%)
Query: 197 ESELNRVIKKSMFEKMKIVGQFNLGFIIVKYD---------------------------- 228
E + + K ++FEK+KI GQFN GF+I K D
Sbjct: 919 EGQRDLYFKSNLFEKLKICGQFNKGFVISKIDLLYFQRGGGGGAVHPVGLGEEQAEPQGK 978
Query: 229 --SDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNG 286
LFIIDQHA DEK NFE K +KSQ+L+ +L L+ +++ NL VF NG
Sbjct: 979 GSYALFIIDQHAADEKSNFEKYNKVFTMKSQRLISKIDLELSPAQIYVIEKNLEVFLHNG 1038
Query: 287 FEFSF--------------------DSSDDGN-------------------VLLTSLPMS 307
F+ D S N V L SLP+
Sbjct: 1039 FDVEIVEEPLRKRRRGGAADGSGEADGSGQANVEDALTAAAAGEGALVQVKVYLLSLPVF 1098
Query: 308 KNTTLGREDIEELLFMLQHTNSTEH-------------------------------CRPS 336
L ++E+ + +L H TEH RP
Sbjct: 1099 NGKIL---EVEDFMSLLHHL--TEHPITYDKASFQMFIRNKGQPNKQTDTWFNYNFPRPQ 1153
Query: 337 RIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
R+ + AS+ACR +VM+G+AL+V EM + + + + PW
Sbjct: 1154 RVWRILASKACRNAVMVGKALNVAEMIKIKKKLSVLKNPW 1193
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHI 57
K++N +Y +FN+ YP II NI + D+NVTPDKR++F +E L +K +
Sbjct: 278 KIINSIYREFNSRLYPIIICNILSETKNFDINVTPDKREVFFIYENELCERIKTAL 333
>gi|145551871|ref|XP_001461612.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429447|emb|CAK94239.1| unnamed protein product [Paramecium tetraurelia]
Length = 685
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 92/171 (53%), Gaps = 2/171 (1%)
Query: 206 KSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNL 265
K F ++I+GQFN GFII +++ ++++DQHA DEKYN+E L +L+VP L
Sbjct: 487 KEHFNNLQIIGQFNKGFIICEHEEKIYVLDQHACDEKYNYERLINQLKFNRAQLIVPITL 546
Query: 266 HLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQ 325
L+ +L DN + +++ + +++ V + + P N LG + + ++L L
Sbjct: 547 KLSGFLLELLIDNQQQI-NDKYKYQVEITENC-VKVKTCPSYSNIQLGADTLLQILDQLS 604
Query: 326 HTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+ +I+ AS+ACR S+M+G L +M +V+N+ + PW
Sbjct: 605 QGKKLDQIEIPQIKQKLASQACRTSIMVGSDLQAKQMENVVKNLTTLISPW 655
>gi|221052410|ref|XP_002257781.1| mismatch repair protein pms1 homologue [Plasmodium knowlesi strain H]
gi|193807612|emb|CAQ38117.1| mismatch repair protein pms1 homologue,putative [Plasmodium knowlesi
strain H]
Length = 1193
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 113/282 (40%), Gaps = 99/282 (35%)
Query: 189 DPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYD-------------------- 228
D S N E + + K ++FEK++I GQFN GF+I K D
Sbjct: 846 DISFNNIDERQRDLYFKSNLFEKLQICGQFNKGFVISKIDLLYFQRGTEGKVVDPGGSGG 905
Query: 229 ----------SDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDN 278
LFIIDQHA DEK NFE K +KSQKL+ +L L+ I++ N
Sbjct: 906 EEAEPKGNSNYALFIIDQHAADEKSNFEKYNKIFTMKSQKLISKIDLELSPAQIYIIEKN 965
Query: 279 LPVFYKNGFEFSF--------------------------DSSDDG-------NVLLTSLP 305
L +F NGF+ D++D G V L SLP
Sbjct: 966 LEIFLHNGFDVEIVEEPAQKRRRLKADDSADAIDPTNVTDATDTGEGVLMQVKVYLLSLP 1025
Query: 306 MSKNTTLGREDIEELLFMLQHTNSTEH-------------------------------CR 334
+ L ++E+ + +L H TEH R
Sbjct: 1026 VFNGKIL---EVEDFMSLLHHL--TEHPITYDKAKFQMFIRNKGQPNKKTDTWFNHNFPR 1080
Query: 335 PSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
P ++ + AS+ACR ++M+G+ L+V EM + + + + PW
Sbjct: 1081 PQKVWRILASKACRNAIMVGKPLNVTEMIKIKKKLSVLKNPW 1122
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHIT 58
K++N +Y +FN+ YP II NI + D+NVTPDKR++F +E L +K +
Sbjct: 278 KIINSIYREFNSRLYPIIICNILSDTKNFDINVTPDKREVFFIYENELCEKIKTSLV 334
>gi|323448291|gb|EGB04191.1| hypothetical protein AURANDRAFT_72554 [Aureococcus anophagefferens]
Length = 649
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 131/309 (42%), Gaps = 26/309 (8%)
Query: 2 KLVNEVYH--QFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEK------------ 47
+ + +V+ + + P +L+I + +VDVNV+PDKR + +D E
Sbjct: 308 RCIGDVWRSVEGDRRGRPAFVLDIRVPPSAVDVNVSPDKRDVVLDDETGRGAVPLPATSN 367
Query: 48 LLLATVKVHITDSY--AIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVP 105
LL+A +++ + D + + G G ++ + PS+ D E S + +
Sbjct: 368 LLVAALRIALHDLWEPSRGSFAGGRSLAPHVA--PSTTPDTEA-PCSLVLPIAVPSCVTS 424
Query: 106 SEDNSNFSHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLK 165
+ +N + P T+ P + + + L + + + +L
Sbjct: 425 TATATNAPAREAMLVVPPTLRPTQRNSDTIAVAQVIALSPWQAARAHIDWNCAVAPARLH 484
Query: 166 ARYARRTVQAQDRCVENRFHANID--PSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFI 223
A T+ Q RC ID P N + + K+ F M+ +GQFNLGF+
Sbjct: 485 ASSVFGTLAVQSRCGHGHRTVQIDRRPGGNVPTAA-----LAKADFSAMEALGQFNLGFL 539
Query: 224 IVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFY 283
+ + LF++DQHA DEK+ +E L + T + +Q L+ P +L L + L +
Sbjct: 540 VCRLGDHLFLVDQHAADEKFRYEALWRDTRVDTQPLLAPLSLDLGATEELALLERRCTVE 599
Query: 284 KNGFEFSFD 292
+ GF + +
Sbjct: 600 RVGFRLAVN 608
>gi|70950630|ref|XP_744622.1| mismatch repair protein [Plasmodium chabaudi chabaudi]
gi|56524651|emb|CAH78788.1| mismatch repair protein pms1 homologue, putative [Plasmodium chabaudi
chabaudi]
Length = 1094
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 107/261 (40%), Gaps = 88/261 (33%)
Query: 204 IKKSMFEKMKIVGQFNLGFIIVKYD--------------------------------SDL 231
K ++F K+KI GQFN GFII K D L
Sbjct: 763 FKSNLFNKLKICGQFNKGFIISKIDLLYFKNETEENATNETDENETDENEYIERKNNYAL 822
Query: 232 FIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEF-- 289
FIIDQHA DEK NFE K +KSQKL+ L L+ I++ NL +F +NGFE
Sbjct: 823 FIIDQHAADEKSNFEKYNKIFTMKSQKLINKIELELSPAQIHIIEKNLVIFLRNGFEIEI 882
Query: 290 ------------------SFDSSDDG----------NVLLTSLPMSKNTTLGREDIEELL 321
+F+++++ V L SLP+ L D LL
Sbjct: 883 VEEPINKKRKINKDVHVGNFENAENDIPDEETLVQIKVYLLSLPVFNGKILEVVDFMSLL 942
Query: 322 FMLQH-----------------TNSTEHC---------RPSRIRAMFASRACRKSVMIGR 355
+ L + + TE+ RP ++ + AS+ACR +VM+G+
Sbjct: 943 YHLNNHPIIFDKGIDDSFLKDKSKLTENTGTWFNYNFPRPQKVWRILASKACRNAVMVGK 1002
Query: 356 ALSVGEMTGLVRNMGRIDQPW 376
L++ EM + + + + PW
Sbjct: 1003 PLNISEMITIKKKLSVLQNPW 1023
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHI 57
K++N +Y +FN+ YP II NI ++D+NVTPDKR++F E L +K+ +
Sbjct: 277 KIINTIYREFNSRLYPIIICNIISDAKNIDINVTPDKREVFFTFENELCEQIKIEL 332
>gi|84784024|gb|ABC61977.1| PMS1-like protein [Trichomonas vaginalis]
Length = 585
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 89/179 (49%), Gaps = 14/179 (7%)
Query: 203 VIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVP 262
I+ F+ M+I+GQ+N FII KY D++ IDQHA E NFE L+K I+SQ+L+ P
Sbjct: 383 AIETKAFKDMEIIGQWNQSFIITKYGCDIYAIDQHAAMEAQNFEKLRKKCSIQSQRLISP 442
Query: 263 QNLHLT-----KINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDI 317
+ T +C K F + +D SD+ ++ + +P G +D+
Sbjct: 443 IVISATPQEISAAEECKQK-------CKEFGYDYDISDN-SIHVKKIPSITTVATGSDDL 494
Query: 318 EELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
EL+ ML H + + R A RAC SV +G ++ +M L+ M + D PW
Sbjct: 495 LELITML-HESPASQPMTRKARIWMAYRACHSSVRVGDTMNHSQMKDLLNRMAQSDFPW 552
>gi|123400320|ref|XP_001301639.1| ATPase [Trichomonas vaginalis G3]
gi|121882844|gb|EAX88709.1| ATPase, putative [Trichomonas vaginalis G3]
Length = 585
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 89/179 (49%), Gaps = 14/179 (7%)
Query: 203 VIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVP 262
I+ F+ M+I+GQ+N FII KY D++ IDQHA E NFE L+K I+SQ+L+ P
Sbjct: 383 AIETKAFKDMEIIGQWNQSFIITKYGCDIYAIDQHAAMEAQNFEKLRKKCSIQSQRLISP 442
Query: 263 QNLHLT-----KINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDI 317
+ T +C K F + +D SD+ ++ + +P G +D+
Sbjct: 443 IVISATPQEISAAEECKQK-------CKEFGYDYDISDN-SIHVKKIPSITTVATGSDDL 494
Query: 318 EELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
EL+ ML H + + R A RAC SV +G ++ +M L+ M + D PW
Sbjct: 495 LELITML-HESPASQPMTRKARIWMAYRACHSSVRVGDTMNHSQMKDLLNRMAQSDFPW 552
>gi|156083705|ref|XP_001609336.1| DNA mismatch repair protein [Babesia bovis T2Bo]
gi|154796587|gb|EDO05768.1| DNA mismatch repair protein, putative [Babesia bovis]
Length = 883
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 97/211 (45%), Gaps = 38/211 (18%)
Query: 204 IKKSMFEKMKIVGQFNLGFIIVKYDSD----------LFIIDQHATDEKYNFETLQKTTL 253
I +F +M++ GQFN GFII K +S +++ID HA DEK FE +
Sbjct: 649 IDPKIFLRMQVCGQFNNGFIIAKLESKYSESNKVKYAVYLIDPHAADEKTKFEKYNSSVK 708
Query: 254 IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDS---SDDG------NVLLTSL 304
I+ Q LV + + L+ +Q +++ NL + Y+NGF + +D+G + L+S
Sbjct: 709 IQRQPLVCERKVDLSPFHQQVVQANLDLLYENGFAATVVRQVVNDEGGYNREPGIYLSSF 768
Query: 305 PMSKNTTLGREDIEELLFMLQHTNSTEH-------------------CRPSRIRAMFASR 345
P LG ED + L + S+ RP RI + A+R
Sbjct: 769 PQVLGQILGEEDFVSFVHDLAQSGSSSQPDPTNTSASQVLWGANTILPRPKRIWNILANR 828
Query: 346 ACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
AC+ +V +G L++ +M + + + PW
Sbjct: 829 ACKDAVKLGDPLTMKQMIVIKDRLAGLVHPW 859
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
+ + +V+ QF++ +LNI + VDVN+ PDKR++F+ E + +K I + Y
Sbjct: 276 RCIKDVHKQFSSKYNVAYVLNINIDSKHVDVNLAPDKRRLFLMQEDTITRQLKEGILELY 335
Query: 62 AIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNS 94
+ D S+ DP + M+++Q S S
Sbjct: 336 MMRMAKD------SITNDP---LRMKQLQFSRS 359
>gi|159468113|ref|XP_001692227.1| hypothetical protein CHLREDRAFT_101121 [Chlamydomonas reinhardtii]
gi|158278413|gb|EDP04177.1| predicted protein [Chlamydomonas reinhardtii]
Length = 193
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 89/167 (53%), Gaps = 3/167 (1%)
Query: 213 KIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQ---KLVVPQNLHLTK 269
+++GQFNLGFI+ + D+FI+DQHA DEK FE LQ++ + Q + L
Sbjct: 2 QVLGQFNLGFILAAHGRDVFIVDQHAADEKTTFERLQRSVALTRQPLLAPMPLPPGLLLP 61
Query: 270 INQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNS 329
++Q ++++++ VF +NGF+F + V + S + + +++ S
Sbjct: 62 LDQLLIREHIDVFRRNGFDFVQRTPAGRLVPVPSPAPAPAPAPAPLSLAFVIYSPVRVRS 121
Query: 330 TEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
R+RAM ASRACR S+M+GR L +M ++ + + QPW
Sbjct: 122 PPPNPDPRVRAMLASRACRSSIMVGRPLDRPQMRRVLDRLAELRQPW 168
>gi|403222966|dbj|BAM41097.1| DNA mismatch repair protein [Theileria orientalis strain Shintoku]
Length = 734
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 97/211 (45%), Gaps = 42/211 (19%)
Query: 208 MFEKMKIVGQFNLGFIIVK---------YDSDLFIIDQHATDEKYNFETLQKTTLIKSQK 258
+F MK+VGQFN FII K ++ ++IIDQHA DEK FE L K+ I Q+
Sbjct: 498 VFRNMKLVGQFNNSFIITKLNFPGVNSEFNYSIYIIDQHAADEKAKFENLNKSVKINKQR 557
Query: 259 LVVPQNLHLTKINQCILKDNLPVFYKNGFE------------------FSFDSSD--DGN 298
L+ P+ + L+ + + +L + NGF+ S S D
Sbjct: 558 LINPKLIELSPFLTQVAEQHLDLLILNGFDTTISKETELVMYNDPEIKMSVGSQDHMAKG 617
Query: 299 VLLTSLPMSKNTTLGREDIEELLFMLQHT------NSTEHC-------RPSRIRAMFASR 345
+ + + P L +D+ + + L T NS E+ RP ++ + ASR
Sbjct: 618 IYVHTYPQVLGRVLEEDDLIDFINQLSSTEEVEKANSNEYIWGTGSIPRPQKVWNILASR 677
Query: 346 ACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
AC+ S+ +G LS +M ++RN+ + PW
Sbjct: 678 ACKSSIRLGDPLSNVQMKTVIRNLSLLIHPW 708
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 29/51 (56%)
Query: 4 VNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVK 54
+ V+ F++ P ILN+ + D VD+N++PDKR F+ E ++ K
Sbjct: 276 IAAVFSHFSSRPRPSFILNLTIDYDKVDINLSPDKRSAFLLSEDYIIRAFK 326
>gi|259155136|ref|NP_001158811.1| mismatch repair endonuclease PMS2 [Salmo salar]
gi|223647526|gb|ACN10521.1| PMS1 protein homolog 2 [Salmo salar]
Length = 726
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 59/104 (56%), Gaps = 10/104 (9%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K+VNEVYH FN HQYPF+ LNI ++ + VDVNVTPDKRQIF+ EKLLLA +K + Y
Sbjct: 330 KVVNEVYHTFNRHQYPFVALNITVASECVDVNVTPDKRQIFLQEEKLLLAILKSSLIAMY 389
Query: 62 AIG----------FTVDGNNMNQSMEQDPSSDVDMEKIQRSNSE 95
G F+ + Q + DME Q +SE
Sbjct: 390 ETGVNKISLNHMSFSTTSKHTLQGSYRPAEPPSDMEGCQVPSSE 433
>gi|156045193|ref|XP_001589152.1| hypothetical protein SS1G_09785 [Sclerotinia sclerotiorum 1980]
gi|154694180|gb|EDN93918.1| hypothetical protein SS1G_09785 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 912
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 56/82 (68%), Gaps = 13/82 (15%)
Query: 196 AESELNRVIKKSMFEKMKIVGQFNLGFII-------------VKYDSDLFIIDQHATDEK 242
AE L+ I KS F KMKI+GQFNLGFI+ ++ ++FIIDQH++DEK
Sbjct: 819 AEKRLSLTISKSDFAKMKIIGQFNLGFILASKAPESTSENGGIQTADNVFIIDQHSSDEK 878
Query: 243 YNFETLQKTTLIKSQKLVVPQN 264
YNFE LQ TT+++SQ+LV PQN
Sbjct: 879 YNFERLQATTIVQSQRLVYPQN 900
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 2 KLVNEVYHQFNNH---QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHIT 58
K NEVY +N Q PFI NIE+ DVNV+PDKR I + + +L +K+ +
Sbjct: 271 KAFNEVYKSYNGWGSTQSPFIFANIELDTHLYDVNVSPDKRTILLHDQSRMLENLKMALA 330
Query: 59 DSY 61
+ +
Sbjct: 331 ELF 333
>gi|327179556|gb|AEA30125.1| mismatch repair protein [Tritrichomonas foetus]
Length = 589
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 99/179 (55%), Gaps = 9/179 (5%)
Query: 201 NRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLV 260
N VI+ F+ M+I+GQ+N F+I + SD++ IDQHA E NFE L+K K QKL+
Sbjct: 375 NNVIETESFDNMEIIGQWNKSFLITRLGSDVYAIDQHAACEAQNFEKLRKVKSKKKQKLL 434
Query: 261 VPQNLHLTKINQCILKDNLPVFYK-NGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEE 319
P L T + +++ + K + F F +D DDG + +T++P +N G ED++E
Sbjct: 435 EPVLLKATPED---IENAISHREKCSQFGFEYDVCDDG-IKVTTIPSDQNVVNGIEDLQE 490
Query: 320 LLFMLQHT--NSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
LL M+ ++T R +RI+ F AC SV +G ++ ++ L+ M D PW
Sbjct: 491 LLGMIHDVPQSNTPMTRMARIQLAF--HACHSSVRVGDVMNNQQIKKLLTRMAHSDYPW 547
>gi|413922860|gb|AFW62792.1| hypothetical protein ZEAMMB73_370746 [Zea mays]
Length = 316
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 59/84 (70%)
Query: 196 AESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIK 255
A +EL+R+ K F +M++VGQFNLGFII K DLFI+DQHA+DEKYNFE L ++T++
Sbjct: 41 ATNELDRLFSKHDFREMEVVGQFNLGFIIGKLGQDLFIVDQHASDEKYNFECLSQSTILN 100
Query: 256 SQKLVVPQNLHLTKINQCILKDNL 279
Q L+ P L L+ + I+ N+
Sbjct: 101 VQPLLEPLRLDLSPEEEVIVSMNM 124
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 78/148 (52%), Gaps = 23/148 (15%)
Query: 250 KTTLIKSQKLVVPQNLHLTKINQCILKDNLP---VFYKNGFEFSFD--SSDDGNVLLTSL 304
K + ++K VV + T C L LP +F KNGF + D +S + LL ++
Sbjct: 157 KHLIANTEKCVV----YFTNNRSCCLTSILPFSQLFRKNGFVLAEDLHASPGNHYLLKAV 212
Query: 305 PMSKNTTLGREDIEELLFMLQHT------------NSTEHCRPSRIRAMFASRACRKSVM 352
P SKN T G +D++EL+ ML + ++ + PSR+RAM ASRACR S M
Sbjct: 213 PFSKNITFGVQDVKELISMLADSQGDCSIISSYKLDTADSVCPSRVRAMLASRACRMSTM 272
Query: 353 IGRALSVGEMTGLV--RNMGRIDQPWVS 378
IG L+ EM ++ ++ R+ PW++
Sbjct: 273 IGDPLTKAEMKKMLVKDSVHRLPLPWIA 300
>gi|260801098|ref|XP_002595433.1| hypothetical protein BRAFLDRAFT_69265 [Branchiostoma floridae]
gi|229280679|gb|EEN51445.1| hypothetical protein BRAFLDRAFT_69265 [Branchiostoma floridae]
Length = 429
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 48/60 (80%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K+VNEVYH +N HQYPF++L+I ++RDSVDVNVTPDKRQ+++ E+ LLA +K + Y
Sbjct: 292 KVVNEVYHMYNRHQYPFVVLDISLARDSVDVNVTPDKRQVWLQEERTLLAIIKTSLMQMY 351
>gi|327179554|gb|AEA30124.1| mismatch repair protein [Trichomonas tenax]
Length = 532
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 81/154 (52%), Gaps = 8/154 (5%)
Query: 203 VIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVP 262
I+ F+ M+I+GQ+N FII KY D++ IDQHA E NFE L+K I+SQKL+ P
Sbjct: 382 AIETKAFKDMEIIGQWNQSFIITKYGCDIYAIDQHAAMEAQNFENLRKKCSIQSQKLIAP 441
Query: 263 QNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLT-SLPMSKNTTLGREDIEELL 321
++LT ++ + EF +D NVLL ++P G +D+ EL+
Sbjct: 442 IKINLTPQETTAAEE----CKQRCKEFGYDYDLQDNVLLVKTIPSVTTVATGADDLLELI 497
Query: 322 FMLQHTNSTE-HCRPSRIRAMFASRACRKSVMIG 354
+L S + R +RI + RAC SV +G
Sbjct: 498 TILYENPSAQPMTRKARIWMQY--RACHSSVRVG 529
>gi|311302914|gb|ADP89031.1| PMS1-like protein [Trichomonas vaginalis]
Length = 539
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 81/160 (50%), Gaps = 4/160 (2%)
Query: 203 VIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVP 262
I+ F+ M+I+GQ+N FII KY D++ IDQHA E NFE L+K I+SQ+L+ P
Sbjct: 383 AIETKAFKDMEIIGQWNQSFIITKYGCDIYAIDQHAAMEAQNFEKLRKKCSIQSQRLISP 442
Query: 263 QNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLF 322
+ T +D + G+++ D ++L+ +P G +D+ EL+
Sbjct: 443 IVISATPQEISAAEDCKQKCKEFGYDYDI---SDNSILVKKIPSITTVATGSDDLLELIT 499
Query: 323 MLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEM 362
ML H + + R A RAC SV +G ++ +M
Sbjct: 500 ML-HESPASQPMTRKARIWMAYRACHSSVRVGDTMNNSQM 538
>gi|441649831|ref|XP_004090979.1| PREDICTED: mismatch repair endonuclease PMS2-like [Nomascus
leucogenys]
Length = 669
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 57/85 (67%), Gaps = 8/85 (9%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
+LVNEVYH +N HQYPF++LNI + + VD+NVTPDKRQI + EKLLLA +K +
Sbjct: 304 RLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSL---- 359
Query: 62 AIG-FTVDGNNMNQSMEQDPSSDVD 85
IG F D N +N S Q P D++
Sbjct: 360 -IGMFDSDVNKLNVS--QQPPLDIE 381
>gi|403375263|gb|EJY87602.1| DNA mismatch repair protein [Oxytricha trifallax]
Length = 783
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 93/189 (49%), Gaps = 17/189 (8%)
Query: 206 KSMFEKMKIVGQFNLGFIIVKYD-SDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQN 264
K F +++I+GQFN GFII + +D+FI+DQHA DE+ + E + I SQ L+ P
Sbjct: 545 KKEFMRLRILGQFNNGFIIGNLNQNDIFILDQHACDERLHLEKYTGSLKIDSQPLIQPII 604
Query: 265 LHLTKINQCILKDNLPVFYKNGFEFS--FDSSDDGNVLLTSLPMSKNTTLGREDIEELLF 322
+ IL+ +F GF+F F + + + SLP S +T D L+
Sbjct: 605 IQYDTELYEILETYQRIFNAFGFQFEKMFWNKYQVQIKVHSLPQSNDTQFEESDFHNLVT 664
Query: 323 MLQHTNSTEHCR--------------PSRIRAMFASRACRKSVMIGRALSVGEMTGLVRN 368
+++ ++ + + P +I + A +ACRKSVM+G+ L + +V
Sbjct: 665 AIRNFDTDDRTKNKYITDQQIFDYLMPKKIMQVLALKACRKSVMVGKKLERRQQYEIVSG 724
Query: 369 MGRIDQPWV 377
+ + PW+
Sbjct: 725 LSNLKDPWI 733
>gi|58737033|dbj|BAD89425.1| postmeiotic segregation increased 2 nirs variant 1 [Homo sapiens]
Length = 572
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 59/91 (64%), Gaps = 8/91 (8%)
Query: 1 MKLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
+LVNEVYH +N HQYPF++LNI + + VD+NVTPDKRQI + EKLLLA +K +
Sbjct: 303 CRLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSL--- 359
Query: 61 YAIG-FTVDGNNMNQSMEQDPSSDVDMEKIQ 90
IG F D N +N S Q P DV+ I+
Sbjct: 360 --IGMFDSDVNKLNVS--QQPLLDVEGNLIK 386
>gi|311302918|gb|ADP89033.1| PMS1-like protein [Trichomonas vaginalis]
Length = 539
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 83/165 (50%), Gaps = 14/165 (8%)
Query: 203 VIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVP 262
I+ F+ M+I+GQ+N FII KY D++ IDQHA E NFE L+K I+SQ+L+ P
Sbjct: 383 AIETKAFKDMEIIGQWNQSFIITKYGCDIYAIDQHAAMEAQNFEKLRKKCSIQSQRLISP 442
Query: 263 QNLHLT-----KINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDI 317
+ T +C K F + +D SD+ ++L+ +P G +D+
Sbjct: 443 IVISATPQEISAAEECKQK-------CKEFGYDYDISDN-SILVKKIPSITTVATGSDDL 494
Query: 318 EELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEM 362
EL+ ML H + + R A RAC SV +G ++ +M
Sbjct: 495 LELITML-HESPASQPMTRKARIWMAYRACHSSVRVGDTMNNSQM 538
>gi|311302916|gb|ADP89032.1| PMS1-like protein [Trichomonas vaginalis]
gi|311302920|gb|ADP89034.1| PMS1-like protein [Trichomonas vaginalis]
Length = 539
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 83/165 (50%), Gaps = 14/165 (8%)
Query: 203 VIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVP 262
I+ F+ M+I+GQ+N FII KY D++ IDQHA E NFE L+K I+SQ+L+ P
Sbjct: 383 AIETKAFKDMEIIGQWNQSFIITKYGCDIYAIDQHAAMEAQNFEKLRKKCSIQSQRLISP 442
Query: 263 QNLHLT-----KINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDI 317
+ T +C K F + +D SD+ ++L+ +P G +D+
Sbjct: 443 IVISATPQEISAAEECKQK-------CKEFGYDYDISDN-SILVKKIPSITTVATGSDDL 494
Query: 318 EELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEM 362
EL+ ML H + + R A RAC SV +G ++ +M
Sbjct: 495 LELITML-HESPASQPMTRKARIWMAYRACHSSVRVGDTMNHSQM 538
>gi|124512056|ref|XP_001349161.1| mismatch repair protein pms1 homologue, putative [Plasmodium
falciparum 3D7]
gi|23498929|emb|CAD51007.1| mismatch repair protein pms1 homologue, putative [Plasmodium
falciparum 3D7]
Length = 1330
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 110/277 (39%), Gaps = 97/277 (35%)
Query: 197 ESELNRVIKKSMFEKMKIVGQFNLGFIIVK------------------------------ 226
E++ + + S+F K+KI GQFN GF+I K
Sbjct: 983 ETQKDLYFQSSLFNKLKICGQFNKGFVISKIDLLYFEKKKKKYGNEGHESECYKTHDNNS 1042
Query: 227 -------YDS-----------DLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLT 268
YD+ LFIIDQHA DEK NFE K +KSQKL+ ++ ++
Sbjct: 1043 NNINCEDYDNFSNDNKHKSNYALFIIDQHAADEKSNFEKYNKIFTMKSQKLISKIHVQVS 1102
Query: 269 KINQCILKDNLPVFYKNGFEFSF-----------------DSSDDG-------NVLLTSL 304
I++ + +F +NGFE + DD NV L SL
Sbjct: 1103 PAQVHIIQKYMSIFLQNGFEVQILEEPIHKRRKTNNNNINEPIDDEEEMLMELNVYLLSL 1162
Query: 305 PMSKNTTLGREDIEELLFML-QH------------------TNSTEHC------RPSRIR 339
P+ L D LL L +H N T+ RP ++
Sbjct: 1163 PVFNGKILEVVDFMSLLHHLTEHPVASYNESEVSVKTTIDLNNKTDTWFNYNFPRPQKVW 1222
Query: 340 AMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+ AS+ACR ++M+G+AL++ EM + + + + PW
Sbjct: 1223 RILASKACRNAIMVGKALNIYEMIKIKKKLSFLKNPW 1259
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 35/54 (64%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKV 55
KL+N +Y +FN+ YP II NI ++D+NVTPDKR++F E+ + +K
Sbjct: 277 KLINTIYREFNSRLYPIIICNILSDTKNIDINVTPDKREVFFTFEQEMCEHMKT 330
>gi|422345813|ref|ZP_16426727.1| DNA mismatch repair protein mutL [Clostridium perfringens
WAL-14572]
gi|373227478|gb|EHP49792.1| DNA mismatch repair protein mutL [Clostridium perfringens
WAL-14572]
Length = 677
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 93/403 (23%), Positives = 193/403 (47%), Gaps = 48/403 (11%)
Query: 4 VNEVYHQFN-NHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATV--------K 54
V + FN ++PF +L I+ + +DVN+ P K +I E+ + V +
Sbjct: 268 VENAFRSFNVTGKFPFFVLFIDTYPELIDVNIHPTKSEIKFKDERFIFKVVFDAVHSAMR 327
Query: 55 VHITDSYAI------GF-TVDGNNMNQSMEQDPSSDVDM-EKIQRSNSEEVEHETIPV-- 104
++ D++ + F + + +S++++ S+ + E I S++ + E I
Sbjct: 328 EYVKDTFTLPEEEEKKFEALKEEVIQESLDKEISTLEKLKENINYKVSDDRKKEEIYSYN 387
Query: 105 PSEDNSNFSHEANLQQS--PETVEPDTPDETIEVIDDMPRLQGS-YRQ-STPVTLSLD-- 158
PS+D +EA ++ + + + + +E+ + + L+ + +++ S +S D
Sbjct: 388 PSKD-----YEAKIEVNIPVDFLSKENQEESFSINNSFNSLENNEFKEVSAKREISYDPI 442
Query: 159 IIQDQLKARYARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQF 218
+I+++++ + + T + +R ++ +KN+ S + K++ F K+K++GQF
Sbjct: 443 LIKNEIRDKVSENTYDSLER-------SDYKCNKNEYGNSLEETIYKEAKFPKLKVIGQF 495
Query: 219 NLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKS---QKLVVPQNLHLTKINQCIL 275
N +I+ +YDS L++IDQHA EK FE K Q L++P ++L+ +
Sbjct: 496 NKTYILAEYDSTLYLIDQHAAHEKILFEKYSSDIAKKKVEIQPLMIPLVVNLSTEDYLYY 555
Query: 276 KDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQH--TNSTEHC 333
+N +F K GF+ S D ++ + +P + E I ++ L+ T T
Sbjct: 556 DENKEIFEKAGFKIS--DFGDNSIRIEEVPYFLDKLNPTELITSMINNLKKMGTGETVEV 613
Query: 334 RPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+ ++I AS +CR +V LS+ EM L+ ++ I+ P+
Sbjct: 614 KYNKI----ASMSCRAAVKANDVLSILEMENLIEDLRYINDPF 652
>gi|326508973|dbj|BAJ86879.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 780
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 49/65 (75%)
Query: 196 AESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIK 255
A +EL+R K F +MK+VGQFNLGFII K + DLFI+DQHA DEKYNFE+L ++T +
Sbjct: 697 ATNELDRFFSKDNFGEMKVVGQFNLGFIIGKLEQDLFIVDQHAADEKYNFESLSQSTTLN 756
Query: 256 SQKLV 260
Q L+
Sbjct: 757 IQPLL 761
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 85/204 (41%), Gaps = 36/204 (17%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITD-- 59
KLVNE+Y N+ QYP +LN + S DVNV PDKR+IF E +L +++ I
Sbjct: 280 KLVNELYRSSNSRQYPLAVLNFCIPTTSYDVNVAPDKRKIFFSSEDTILLSLREAIESLY 339
Query: 60 -----SYAIGFTVDGNNMNQS----MEQDPSSD--------VDMEKIQRSNSEEVEHETI 102
S++I D +N + E DP+ D +D E + ++ + +T
Sbjct: 340 NPQQCSFSINHIEDPEKVNHTEDPVKEDDPTIDEPIKSTYLMDKENVSSPENDNCKEDTD 399
Query: 103 P---VPSEDNSNFSH-------EANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTP 152
P +D FS A SP T PDT EV D P + R P
Sbjct: 400 SDDQDPPKDQKVFSSATRVATGAACRDMSPWTRSPDT-----EV--DRPPWFSALRYEQP 452
Query: 153 VTLSLDIIQDQLKARYARRTVQAQ 176
D + ++ + R + AQ
Sbjct: 453 KRPRADCKSNPVRENHVRTGLAAQ 476
>gi|260587681|ref|ZP_05853594.1| DNA mismatch repair protein MutL [Blautia hansenii DSM 20583]
gi|331084030|ref|ZP_08333137.1| hypothetical protein HMPREF0992_02061 [Lachnospiraceae bacterium
6_1_63FAA]
gi|260541946|gb|EEX22515.1| DNA mismatch repair protein MutL [Blautia hansenii DSM 20583]
gi|330402392|gb|EGG81962.1| hypothetical protein HMPREF0992_02061 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 636
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 167/388 (43%), Gaps = 53/388 (13%)
Query: 1 MKLVNEVYHQFN-NHQYPFIILNIEMSRDSVDVNVTPDKRQI-FMDHEKLLLATVKVHIT 58
MK + E Y + H+YPF+ L ++ + VDVNV P K ++ F + + AT + IT
Sbjct: 265 MKAIEEAYKPYMMQHKYPFVCLQYDIHGEDVDVNVHPTKMEVRFKNQSAIYNATYDL-IT 323
Query: 59 DSYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANL 118
D+ A G + + P V ++ Q ++ E IPVP N E
Sbjct: 324 DALA------GKEIIPEVSLTPKPAVGEKQAQ------IKEEKIPVPEPFEKNRIAEEKP 371
Query: 119 QQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDI--IQDQLKARYARRTVQA- 175
+P + P + + E ++ P+ ++ I + +++A+ + +A
Sbjct: 372 VYAPVGLRPASAEPKTE------------SKAEPINVNEPIKPTEPEIQAKPEEQKKEAF 419
Query: 176 --QDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFI 233
+ + VE K ++ E NR++ K +I+GQ + +V+YD+ +I
Sbjct: 420 PKEKQAVE----------KAEQLELFDNRLLSKEARIHHRIIGQLFDTYWLVEYDNKFYI 469
Query: 234 IDQHATDEKYNFETLQKTTL---IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFS 290
IDQHA EK +E K I SQ + P + L +LK NL +F + GFE S
Sbjct: 470 IDQHAAHEKVLYERFLKEFAKKEILSQMISPPSLISLNLQESNLLKANLEIFREFGFEIS 529
Query: 291 FDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCR--PSRIRAMFASRACR 348
+ ++ ++P + ++EL + + EH P + A+ AC+
Sbjct: 530 EFGGKEYSI--HAVP----ANIYGVSVQELFIQILDSLEQEHVSKTPDILAERIATAACK 583
Query: 349 KSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+V LSV E L+ + ++ P+
Sbjct: 584 AAVKGNNRLSVKEADALIDELLSLENPY 611
>gi|242008846|ref|XP_002425208.1| DNA mismatch repair protein pms2, putative [Pediculus humanus
corporis]
gi|212508929|gb|EEB12470.1| DNA mismatch repair protein pms2, putative [Pediculus humanus
corporis]
Length = 712
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 63/91 (69%), Gaps = 2/91 (2%)
Query: 229 SDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFE 288
SD+FIIDQHA+DEKYNFE L+ T+++ QK+V P+ L+LT + ++ ++ +F KNGF
Sbjct: 604 SDIFIIDQHASDEKYNFEMLKLKTVMQCQKMVNPETLNLTVDKEELMLEHEEIFKKNGFH 663
Query: 289 FSFDSSD--DGNVLLTSLPMSKNTTLGREDI 317
F FD + + LTS+PMSK+ G+ D+
Sbjct: 664 FIFDETQVPTKRIKLTSVPMSKSIVFGKNDV 694
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 56/87 (64%), Gaps = 4/87 (4%)
Query: 1 MKLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
KLVNE YHQFN+H+ PF+IL+I++ D+N+ PDKRQ+ + +E LLAT+K + D
Sbjct: 307 FKLVNETYHQFNSHEDPFVILHIKVEDGLFDINLVPDKRQVLVQNENFLLATLKESLLDM 366
Query: 61 YA-IGFTVDGNN---MNQSMEQDPSSD 83
+ I T+ NN +N E D SSD
Sbjct: 367 FKLIPSTLKVNNIGLLNIKFENDKSSD 393
>gi|310778298|ref|YP_003966631.1| DNA mismatch repair protein MutL [Ilyobacter polytropus DSM 2926]
gi|309747621|gb|ADO82283.1| DNA mismatch repair protein MutL [Ilyobacter polytropus DSM 2926]
Length = 633
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 175/385 (45%), Gaps = 57/385 (14%)
Query: 3 LVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYA 62
+++ Y + +YPF I+ +E+ +DVNV P K+ + + V I A
Sbjct: 258 IIDGYYTKLTKGRYPFAIIFLEIDPKEIDVNVHPSKKIVKFSESSFVYNQVFSEIEK--A 315
Query: 63 IGFTVDGNNMN---QSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQ 119
IG D ++ Q+ E++ + +D+++ + +E+ + P + D + E +
Sbjct: 316 IGEDEDIVSLEMSFQNREKNVENFLDLDEFKGIIDKEI---STPKKTPDKEHSEKEKTEE 372
Query: 120 QSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRC 179
++ E P +E I+ ++ L G + + +Y+ A+D+
Sbjct: 373 KNNEKTVPSFKEEVIKT-QEVSLLDG---------------EGVFQKKYS-----AEDKN 411
Query: 180 VENR---------FHANIDPSKNKEAESELNRVIKKSMFEK--MKIVGQFNLGFIIVKYD 228
++NR + +ID S+ K + +K++ EK +++GQF +IIV+ +
Sbjct: 412 IKNRPEVLQEEKKIYQSIDVSEKKP------EIPEKTIEEKNYFRVIGQFMNSYIIVERN 465
Query: 229 SDLFIIDQHATDEKYNFETLQKTTL---IKSQKLVVPQNLHLTKINQCILKDNLPVFYKN 285
L I DQH E+ +ETL+K + +Q L+VP L L+ + I+ +NL +F +
Sbjct: 466 KTLEIYDQHIVQERVLYETLKKRHFSREVATQNLLVPLKLRLSYEEKNIVFENLEIFNEF 525
Query: 286 GFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELL-FMLQHTNSTEHCRPSRIRAMFAS 344
GFE D DD VLL +P+ R IE FML+ + + R + S
Sbjct: 526 GFEIE-DFGDD-EVLLRGVPVFD----FRTSIENTFRFMLEELKNETGVKDFR-EKIIIS 578
Query: 345 RACRKSVMIGRALSVGEMTGLVRNM 369
+CR S+ G LS EM L++ +
Sbjct: 579 MSCRNSIKAGEKLSFDEMELLIKRL 603
>gi|17942780|pdb|1H7S|A Chain A, N-Terminal 40kda Fragment Of Human Pms2
gi|17942781|pdb|1H7S|B Chain B, N-Terminal 40kda Fragment Of Human Pms2
Length = 365
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 45/61 (73%)
Query: 1 MKLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
+LVNEVYH +N HQYPF++LNI + + VD+NVTPDKRQI + EKLLLA +K +
Sbjct: 303 CRLVNEVYHXYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIGX 362
Query: 61 Y 61
+
Sbjct: 363 F 363
>gi|294909571|ref|XP_002777798.1| DNA mismatch repair protein PMS1, putative [Perkinsus marinus ATCC
50983]
gi|239885760|gb|EER09593.1| DNA mismatch repair protein PMS1, putative [Perkinsus marinus ATCC
50983]
Length = 871
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 85/166 (51%), Gaps = 11/166 (6%)
Query: 204 IKKSMFEKMKIVGQFNLGFIIVKYDSD-LFIIDQHATDEKYNFETLQKTTLIKSQKLVVP 262
+ K FE M+++GQFN GFII + LFI+DQHA DEK FETL KT+ +KSQ ++VP
Sbjct: 684 LGKEDFEAMRVIGQFNKGFIITALEGRWLFILDQHACDEKTIFETLNKTSELKSQPMIVP 743
Query: 263 QNLHLTKINQCILKDNLPVFYKNGFEFSF--DSSDDGNVLLTSLPMS------KNTTLGR 314
L L + ++ + GF F+F D+ V LTSL ++ ++ L +
Sbjct: 744 VRLSLPPPLESCIRGSRREIEACGFRFNFADDAPIGSRVQLTSLGVASGLGFERSRPLTK 803
Query: 315 EDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVG 360
ED +L +L +T R + CR + +I +S+
Sbjct: 804 EDFVDLASLLLDRGATGRSDDERRHRLGG--VCRYTHVIASPVSIA 847
>gi|18310138|ref|NP_562072.1| DNA mismatch repair protein [Clostridium perfringens str. 13]
gi|20455087|sp|Q8XL86.1|MUTL_CLOPE RecName: Full=DNA mismatch repair protein MutL
gi|18144817|dbj|BAB80862.1| DNA mismatch repair protein [Clostridium perfringens str. 13]
Length = 674
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/404 (23%), Positives = 187/404 (46%), Gaps = 53/404 (13%)
Query: 4 VNEVYHQFN-NHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATV--------K 54
V + FN ++PF +L I+ + +DVN+ P K +I E+ + V +
Sbjct: 268 VENAFRSFNVTGKFPFFVLFIDTYPELIDVNIHPTKSEIKFKDERFIFKVVFDAVHSAMR 327
Query: 55 VHITDSYAI------GF-TVDGNNMNQSMEQDPSSDVDM-EKIQRSNSEEVEHETIPV-- 104
++ D++ + F + + +S++++ S+ + E I SE+ + E I
Sbjct: 328 EYVKDTFTLPEEEEKKFEALKEEVIQESLDKEISTLEKLKENINYKVSEDKKKEEIYSYN 387
Query: 105 PSEDNSNFSHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQ-STPVTLSLD--IIQ 161
PS+D + + + + + + DE+ + + + +++ S +S D +I+
Sbjct: 388 PSKD---YEAKTEVNIPVDFLSKENQDESFSINNSLE--NNEFKEVSAKREISYDPILIK 442
Query: 162 DQLKARYARRTVQAQDR----CVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQ 217
++LK + + T ++ +R C +N + +I+ +EA+ F K++++GQ
Sbjct: 443 NELKDKVSESTSESLERSDYKCNKNEYGNSIEEIIYREAK-----------FPKLRVIGQ 491
Query: 218 FNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKS---QKLVVPQNLHLTKINQCI 274
FN +I+ +YDS L++IDQHA EK FE K Q L++P + L +
Sbjct: 492 FNKTYILAEYDSTLYLIDQHAAHEKILFEKYSSDIAKKKVEIQPLMIPLVVTLPTEDYLY 551
Query: 275 LKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQH--TNSTEH 332
+N +F K GF+ S D ++ + +P + E I ++ L+ T T
Sbjct: 552 YDENKEIFEKAGFKIS--DFGDNSIRIEEVPYFLDKLNPTELITSMINNLKKMGTGETVE 609
Query: 333 CRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+ ++I AS +CR +V LS+ EM L+ ++ I+ P+
Sbjct: 610 VKYNKI----ASMSCRAAVKANDVLSILEMENLIEDLRYINDPF 649
>gi|17942770|pdb|1EA6|A Chain A, N-Terminal 40kda Fragment Of Nhpms2 Complexed With Adp
gi|17942771|pdb|1EA6|B Chain B, N-Terminal 40kda Fragment Of Nhpms2 Complexed With Adp
Length = 364
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 45/60 (75%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
+LVNEVYH +N HQYPF++LNI + + VD+NVTPDKRQI + EKLLLA +K + +
Sbjct: 304 RLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIGMF 363
>gi|17942778|pdb|1H7U|A Chain A, Hpms2-atpgs
gi|17942779|pdb|1H7U|B Chain B, Hpms2-atpgs
Length = 365
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 45/60 (75%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
+LVNEVYH +N HQYPF++LNI + + VD+NVTPDKRQI + EKLLLA +K + +
Sbjct: 304 RLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIGMF 363
>gi|182626338|ref|ZP_02954093.1| DNA mismatch repair protein MutL [Clostridium perfringens D str.
JGS1721]
gi|177908357|gb|EDT70902.1| DNA mismatch repair protein MutL [Clostridium perfringens D str.
JGS1721]
Length = 674
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 94/403 (23%), Positives = 177/403 (43%), Gaps = 51/403 (12%)
Query: 4 VNEVYHQFN-NHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYA 62
V + FN ++PF +L I+ + +DVN+ P K +I E+ + V
Sbjct: 268 VENAFRSFNVTGKFPFFVLFIDTYPELIDVNIHPTKSEIKFKDERFIFKVV--------- 318
Query: 63 IGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHET----IPVPSEDNSNFSHEANL 118
F + M + ++ + + EK + EEV E+ I + N +++ +
Sbjct: 319 --FDAVHSAMREYVKDTFTLPEEEEKKFEALKEEVIQESLDKEISTLEKLKENINYKVSD 376
Query: 119 QQSPETVEPDTPDETIEV-------IDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARR 171
+ E + P + E +D + + +S+ SL+ ++ K A+R
Sbjct: 377 DRKKEEIYSYNPSKDYEAKTEVNIPVDFLSKENQD--ESSKFNNSLE--NNEFKEVSAKR 432
Query: 172 TV---------QAQDRCVENRF----HANIDPSKNKEAESELNRVIKKSMFEKMKIVGQF 218
+ + +D+ EN + ++ +KN+ S + K++ F K+K++GQF
Sbjct: 433 EISYDPILIKNEIRDKVSENTYDSLESSDYKCNKNEYGNSLEETIYKEAKFPKLKVIGQF 492
Query: 219 NLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKS---QKLVVPQNLHLTKINQCIL 275
N +I+ +YDS L++IDQHA EK FE K Q L++P ++L +
Sbjct: 493 NKTYILAEYDSTLYLIDQHAAHEKILFEKYSSDIAKKKVEIQPLMIPLVVNLPTEDYLYY 552
Query: 276 KDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQH--TNSTEHC 333
+N +F K GF+ S D ++ + +P + E I ++ L+ T T
Sbjct: 553 DENKEIFEKAGFKIS--DFGDNSIRIEEVPYFLDKLNPTELITSMINNLKKMGTGETVEV 610
Query: 334 RPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+ ++I AS +CR +V LS+ EM L+ ++ I+ P+
Sbjct: 611 KYNKI----ASMSCRAAVKANDVLSILEMENLIEDLRYINDPF 649
>gi|311302922|gb|ADP89035.1| PMS1-like protein [Trichomonas vaginalis]
Length = 539
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 86/166 (51%), Gaps = 16/166 (9%)
Query: 203 VIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVP 262
I+ F+ M+I+GQ+N FII KY D++ IDQHA E NFE L+K I+SQ+L+ P
Sbjct: 383 AIETKAFKDMEIIGQWNQSFIITKYGCDIYAIDQHAAMEAQNFEKLRKKCSIQSQRLISP 442
Query: 263 QNLHLT-----KINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDI 317
+ T +C K F + +D SD+ ++ + +P G +D+
Sbjct: 443 IVISATPQEISAAEECKQK-------CKEFGYDYDISDN-SIHVKKIPSITTVATGSDDL 494
Query: 318 EELLFMLQHTNSTE-HCRPSRIRAMFASRACRKSVMIGRALSVGEM 362
EL+ ML + +++ R +RI A RAC SV +G ++ +M
Sbjct: 495 LELITMLHESPASQPMTRNARI--WMAYRACHSSVRVGDTMNHSQM 538
>gi|110800749|ref|YP_695805.1| DNA mismatch repair protein [Clostridium perfringens ATCC 13124]
gi|122958915|sp|Q0TRD5.1|MUTL_CLOP1 RecName: Full=DNA mismatch repair protein MutL
gi|110675396|gb|ABG84383.1| DNA mismatch repair protein MutL [Clostridium perfringens ATCC
13124]
Length = 674
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 94/406 (23%), Positives = 188/406 (46%), Gaps = 57/406 (14%)
Query: 4 VNEVYHQFN-NHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATV--------K 54
V + FN ++PF +L I+ + +DVN+ P K +I E+ + V +
Sbjct: 268 VENAFRSFNVTGKFPFFVLFIDTYPELIDVNIHPTKSEIKFKDERFIFKVVFDAVHSAMR 327
Query: 55 VHITDSYAI------GF-TVDGNNMNQSMEQDPSSDVDM-EKIQRSNSEEVEHETIPV-- 104
++ D++ + F + + +S++++ S+ + E I SE+ + E I
Sbjct: 328 EYVKDTFTLPEEEEKKFEALKEEVIQESLDEEISTLEKLKENINYKVSEDRKKEEIYSYN 387
Query: 105 PSEDNSNFSHEANLQQSPETVEPDTPDETIEVIDDMPR---LQGSYRQSTPVTLSLD--I 159
PS+D + + + + + + +E+ + + + +GS ++ +S D +
Sbjct: 388 PSKD---YEAKTEVNIPVDFLSKENQEESFSINNSLENNNFKEGSAKRE----ISYDPIL 440
Query: 160 IQDQLKARYARRTVQAQDR----CVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIV 215
I+++LK + + T ++ +R C +N + +I+ +EA+ F K++++
Sbjct: 441 IKNELKDKVSESTSESLERSDYKCNKNEYGNSIEEIIYREAK-----------FPKLRVI 489
Query: 216 GQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKS---QKLVVPQNLHLTKINQ 272
GQFN +I+ +YDS L++IDQHA EK FE K Q L++P + L +
Sbjct: 490 GQFNKTYILAEYDSTLYLIDQHAAHEKILFEKYSSDIAKKRVEIQPLMIPLVVTLPTEDY 549
Query: 273 CILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQH--TNST 330
+N +F K GF+ S D ++ + +P + E I ++ L+ T T
Sbjct: 550 LYYDENKEIFEKAGFKIS--DFGDNSIRIEEVPYFLDKLNPTELITSMINNLKKMGTGET 607
Query: 331 EHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+ ++I AS +CR +V LS+ EM L+ ++ I+ P+
Sbjct: 608 VEVKYNKI----ASMSCRAAVKANDVLSILEMENLIEDLRYINDPF 649
>gi|403360310|gb|EJY79825.1| DNA mismatch repair enzyme (predicted ATPase) [Oxytricha trifallax]
Length = 636
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 87/172 (50%), Gaps = 17/172 (9%)
Query: 200 LNRVIKKSMFEKMKIVGQFNLGFIIVKY-DSDLFIIDQHATDEKYNFETLQKTTLIKSQK 258
+ + K F K++++GQFN GFI+ D DLFI+DQHA DE+ + E K I+SQ
Sbjct: 450 MKKSFWKKEFLKLRVLGQFNAGFILCTLNDYDLFILDQHACDERLHLEMFTKQLKIESQP 509
Query: 259 LVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDG--NVLLTSLPMSKNTTLGRED 316
++P + +++ +F GF+F S + V +TS+P SK+ D
Sbjct: 510 RIMPFEFDMDANLYNVVEIYERIFKAFGFQFEKVSWNRKTVQVKVTSMPRSKDQQFEESD 569
Query: 317 IEELLFMLQHTNSTEHCR--------------PSRIRAMFASRACRKSVMIG 354
L+ +++ +S E + P +I+ + A +ACRKSVM+G
Sbjct: 570 FHNLVTSIRNFDSDEKAKMKYQSDPQIFEYLMPRKIQQILALQACRKSVMVG 621
>gi|168218089|ref|ZP_02643714.1| DNA mismatch repair protein MutL [Clostridium perfringens NCTC
8239]
gi|182379888|gb|EDT77367.1| DNA mismatch repair protein MutL [Clostridium perfringens NCTC
8239]
Length = 674
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 92/400 (23%), Positives = 187/400 (46%), Gaps = 45/400 (11%)
Query: 4 VNEVYHQFN-NHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLL--------ATVK 54
V + FN ++PF +L I+ + +DVN+ P K +I E+ + A ++
Sbjct: 268 VENAFRSFNVTGKFPFFVLFIDTYPELIDVNIHPTKSEIKFKDERFIFKVVFDAVHAAMR 327
Query: 55 VHITDSYAI------GF-TVDGNNMNQSMEQDPSSDVDM-EKIQRSNSEEVEHETIPV-- 104
++ D++ + F + + +S++++ S+ + E I SE+ + E I
Sbjct: 328 EYVKDTFTLPEEEEKKFEALKEEVIQESLDKEISTLEKLKENINYKVSEDRKKEEIYSYN 387
Query: 105 PSEDNSNFSHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQ-STPVTLSLD--IIQ 161
PS+D + + + + + + DE+ + + + +++ S +S D +I+
Sbjct: 388 PSKD---YEAKTEVNIPVDFLSKENQDESSKFNNSLE--NNEFKEVSAKREISYDPILIK 442
Query: 162 DQLKARYARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLG 221
++++ + + T + +R ++ +KN+ S + K++ F K+K++GQFN
Sbjct: 443 NEIRDKVSENTYDSLER-------SDYKCNKNEYGNSLEETIYKEAKFPKLKVIGQFNKT 495
Query: 222 FIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKS---QKLVVPQNLHLTKINQCILKDN 278
+I+ +YDS L++IDQHA EK FE K Q L++P + L + +N
Sbjct: 496 YILAEYDSTLYLIDQHAAHEKILFEKYSSDIAKKKVEIQPLMIPLVVTLPIEDYLYYDEN 555
Query: 279 LPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQH--TNSTEHCRPS 336
+F K GF+ S D ++ + +P + E I ++ L+ T T + +
Sbjct: 556 KEIFEKAGFKIS--DFGDNSIRIEEVPYFLDKLNPTELITSMINNLKKMGTGETVEVKYN 613
Query: 337 RIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+I AS +CR +V LS+ EM L+ ++ I+ P+
Sbjct: 614 KI----ASMSCRAAVKANDVLSILEMENLIEDLRYINDPF 649
>gi|110801747|ref|YP_698494.1| DNA mismatch repair protein [Clostridium perfringens SM101]
gi|123341838|sp|Q0STR3.1|MUTL_CLOPS RecName: Full=DNA mismatch repair protein MutL
gi|110682248|gb|ABG85618.1| DNA mismatch repair protein MutL [Clostridium perfringens SM101]
Length = 674
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 94/403 (23%), Positives = 177/403 (43%), Gaps = 51/403 (12%)
Query: 4 VNEVYHQFN-NHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYA 62
V + FN ++PF +L I+ + +DVN+ P K +I E+ + V
Sbjct: 268 VENAFRSFNVTGKFPFFVLFIDTYPELIDVNIHPTKSEIKFKDERFIFKLV--------- 318
Query: 63 IGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHET----IPVPSEDNSNFSHEANL 118
F + M + ++ + + EK + EEV E+ I + N +++ +
Sbjct: 319 --FDAVHSAMREYVKDTFTLPEEEEKKFEALKEEVIQESLDKEISTLEKLKENINYKVSD 376
Query: 119 QQSPETVEPDTPDETIEV-------IDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARR 171
+ E + P + E +D + + + +S+ SL+ + K A+R
Sbjct: 377 DKRKEEIYSYNPSKDYEAKTEVNIPVDFLSK--ENQEESSKFNNSLE--NNDFKEVSAKR 432
Query: 172 TV---------QAQDRCVENRF----HANIDPSKNKEAESELNRVIKKSMFEKMKIVGQF 218
+ + +D+ EN + ++ +KN+ S R+ +++ F K+K++GQF
Sbjct: 433 EISYDPILIKNELKDKVSENTYDSLESSDYKCNKNEYGNSLEERIYREAKFPKLKVIGQF 492
Query: 219 NLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKS---QKLVVPQNLHLTKINQCIL 275
N +I+ +YDS L++IDQHA EK FE K Q L++P + L +
Sbjct: 493 NKTYILAEYDSTLYLIDQHAAHEKILFEKYSSDIAKKKVEIQPLMIPLVVTLPTEDYLYY 552
Query: 276 KDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQH--TNSTEHC 333
+N +F K GF+ S D ++ + +P + E I ++ L+ T T
Sbjct: 553 DENKEIFEKAGFKIS--DFGDNSIRIEEVPYFLDKLNPTELIISMINNLKKMGTGETVEV 610
Query: 334 RPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+ ++I AS +CR +V LS+ EM L+ ++ I+ P+
Sbjct: 611 KYNKI----ASMSCRAAVKANDVLSILEMENLIEDLRYINDPF 649
>gi|168214982|ref|ZP_02640607.1| DNA mismatch repair protein MutL [Clostridium perfringens CPE str.
F4969]
gi|170713599|gb|EDT25781.1| DNA mismatch repair protein MutL [Clostridium perfringens CPE str.
F4969]
Length = 674
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 189/406 (46%), Gaps = 57/406 (14%)
Query: 4 VNEVYHQFN-NHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATV--------K 54
V + FN ++PF +L I+ + +DVN+ P K +I E+ + V +
Sbjct: 268 VENAFRSFNVTGKFPFFVLFIDTYPELIDVNIHPTKSEIKFKDERFIFKVVFDAVHSAMR 327
Query: 55 VHITDSYAI------GF-TVDGNNMNQSMEQDPSSDVDM-EKIQRSNSEEVEHETIPV-- 104
++ D++ + F + + +S++++ S+ + E I SE+ + E I
Sbjct: 328 EYVKDTFTLPEEEEKKFEALKEEVIQESLDEEISTLEKLKENINYKVSEDRKKEEIYSYN 387
Query: 105 PSEDNSNFSHEANLQQSPETVEPDTPDETIEVIDDMPR---LQGSYRQSTPVTLSLD--I 159
PS+D + + + + + + +E+ + + + +GS ++ +S D +
Sbjct: 388 PSKD---YEAKTEVNIPVDFLSKENQEESFSINNSLENNNFKEGSAKRE----ISYDPIL 440
Query: 160 IQDQLKARYARRTVQAQDR----CVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIV 215
I+++LK + + T ++ +R C +N + +I+ +EA+ F K++++
Sbjct: 441 IKNELKDKVSESTSESLERSDYKCNKNEYGNSIEEIIYREAK-----------FPKLRVI 489
Query: 216 GQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL---IKSQKLVVPQNLHLTKINQ 272
GQFN +I+ +YDS L++IDQHA EK FE ++ Q L++P + L +
Sbjct: 490 GQFNKTYILAEYDSTLYLIDQHAAHEKILFEKYSSDIAKKRVEIQPLMIPLVVTLPTEDY 549
Query: 273 CILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQH--TNST 330
+N +F K GF+ S D ++ + +P + E I ++ L+ T T
Sbjct: 550 LYYDENKEIFEKAGFKIS--DFGDNSIRIEEVPYFLDKLNPTELITSMINNLKKMGTGET 607
Query: 331 EHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+ ++I AS +CR +V LS+ EM L+ ++ I+ P+
Sbjct: 608 VAVKYNKI----ASMSCRAAVKANDVLSILEMENLIEDLRYINDPF 649
>gi|303278460|ref|XP_003058523.1| DNA mismatch repair enzyme [Micromonas pusilla CCMP1545]
gi|226459683|gb|EEH56978.1| DNA mismatch repair enzyme [Micromonas pusilla CCMP1545]
Length = 736
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 86/184 (46%), Gaps = 7/184 (3%)
Query: 198 SELNRVIKKSMFEKMKIVGQFNLGFIIVKYDS-DLFIIDQHATDEKYNFETLQ-----KT 251
S N V+ + E ++ Q+ F++++ S DLF +DQHA+DE+ E L+ +
Sbjct: 488 STANAVVTRESLENATVLTQWGKKFVLIRSASGDLFALDQHASDERVRLENLRRDLTARG 547
Query: 252 TLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTT 311
+ S+ L P L+ L+ N ++ G+ + D + G V LT P + TT
Sbjct: 548 DAVTSKVLPHPVPCELSAAELATLRANASSAHRWGWRWEDDDAGGGGVSLTGTPAIEGTT 607
Query: 312 LGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGR 371
LG + + E L + T P+ R + AS+ACR ++M G L E L+ + +
Sbjct: 608 LGGDALGEYLREIAAVGLTSAPPPALHR-LLASKACRGAIMFGDMLRRRECVALLEELRK 666
Query: 372 IDQP 375
P
Sbjct: 667 TQLP 670
>gi|328723290|ref|XP_001947410.2| PREDICTED: mismatch repair endonuclease PMS2-like [Acyrthosiphon
pisum]
Length = 364
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 51/68 (75%)
Query: 1 MKLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
+K VNEVYHQ+N +QYPF+ LNI ++R VD+NVTPDKRQIF+ +E L++ +KV+ T
Sbjct: 283 IKTVNEVYHQYNQNQYPFVYLNITIARAEVDINVTPDKRQIFLSNENYLVSIIKVNDTSI 342
Query: 61 YAIGFTVD 68
G+ ++
Sbjct: 343 TIYGYLIN 350
>gi|313893442|ref|ZP_07827014.1| DNA mismatch repair protein, C-terminal domain protein [Veillonella
sp. oral taxon 158 str. F0412]
gi|313442083|gb|EFR60503.1| DNA mismatch repair protein, C-terminal domain protein [Veillonella
sp. oral taxon 158 str. F0412]
Length = 676
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 102/410 (24%), Positives = 178/410 (43%), Gaps = 54/410 (13%)
Query: 1 MKLVNEVYHQF---NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHI 57
MK ++ YH N H P ++LNI + VD+NV P K ++ +K++ V I
Sbjct: 265 MKAIDNAYHALLPKNGH--PLVVLNITVPAGMVDINVHPRKSEVKFSDDKIIFKAVYHGI 322
Query: 58 TDSYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEAN 117
++ N +++ E++ S+ + + + +S H T +DN+N SH +
Sbjct: 323 LNAL-------NNPLHERYERESSAYMGISESLSKDSSNT-HNTAINQGDDNTNISHGNS 374
Query: 118 LQQS---PETVEPDTPD-ETIEVIDDMPRLQGSYRQSTPVTLSLDIIQ--DQLKAR-YAR 170
S P V D E I D ++ G R + + Q + LKA+ Y
Sbjct: 375 TYDSYRTPPVVHDDMQSAEHIATAVDYDKVFGGRRTKGYEVMRGETTQFVENLKAKGYTP 434
Query: 171 RTVQA---QDRCVENRFHA-----------NIDPSKN-----KEAESELNRVIKKSMFEK 211
T +A Q + F+A +ID K+ +E + E R I+ S F
Sbjct: 435 PTPKATYEQSSFTDESFNAVPKEFTSYTKEDIDRFKSLSHDIREQDVE-ERTIQNSGFLP 493
Query: 212 MKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTT-LIKSQKLVVPQNLHLTKI 270
M GQ +I+ K DL+IIDQHA E+ ++ L K++ I Q ++VPQ T
Sbjct: 494 M---GQVASCYILAKKGDDLYIIDQHAAHERVRYDKLCKSSESIPMQSILVPQYSEATDD 550
Query: 271 NQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNST 330
++++ GF+ + L P+ + E I + +F H
Sbjct: 551 EMNLVEEERETLLDLGFDVELGGPT--KIKLVGAPVDLVESKAFE-ILQYVFSYLH---- 603
Query: 331 EHCRPSRIR---AMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPWV 377
EH +P++ + M A +CR ++ G L++ +MT L+ ++ ++P+V
Sbjct: 604 EHQQPTKAQLRHEMLAYASCRGAIKAGHNLNMYQMTTLIEDLFSTEKPYV 653
>gi|442804337|ref|YP_007372486.1| DNA mismatch repair protein MutL [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442740187|gb|AGC67876.1| DNA mismatch repair protein MutL [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 656
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 95/398 (23%), Positives = 176/398 (44%), Gaps = 53/398 (13%)
Query: 4 VNEVYH-QFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYA 62
+ E Y + ++PF +L +++ ++VDVNV P K ++ E ++ TV + ++D+
Sbjct: 268 IEEAYKTRLMQKRFPFTVLKVDVPPETVDVNVHPAKLEVRFSDENMVYRTVYMAVSDA-- 325
Query: 63 IGFTVDGNNMNQSMEQDPSS------DVDMEKIQRSNSEEVEHETIPVPSEDNSNFS-HE 115
+ G ++ QS+E++ S +V++E +++ P PS+ H
Sbjct: 326 ----LSGASLIQSIEEEDGSEIFSFGEVNIENKPEQTKMQLKPVIRPAPSDAFIRAGEHS 381
Query: 116 ANLQQS-------PETVEPDTPDETIEV--IDDMPRLQGSYRQSTPVTLSL-DIIQDQLK 165
++ + E+ E + P E++ V I + P + Y+QS + D I + K
Sbjct: 382 GKIESARKNDDIRKESSESNIPGESLHVKEITESPVRKEEYKQSHKAEVRPNDNISRETK 441
Query: 166 ARYARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIV 225
T A R A D +KEA + R++ +I+GQ +II+
Sbjct: 442 ------TAGAVAR------QAGTD--TDKEAGDDRERLL------NARIIGQAFDSYIIL 481
Query: 226 KYDSDLFIIDQHATDEKYNFETLQKTTLIK---SQKLVVPQNLHLTKINQCILKDNLPVF 282
+ D+F+IDQHA E+ FETL++ + + SQ L+ P + LT+ + P
Sbjct: 482 EEGEDVFVIDQHAAHERIRFETLREWFVHEEAFSQGLLSPVMVELTQQEMHEFTELEPYI 541
Query: 283 YKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFML-QHTNSTEHCRPSRIRAM 341
K GFE + + VL+ ++P D ++L L + T P M
Sbjct: 542 RKLGFE--AEVFGNRTVLVRAIPYLLTEGFSDRDFRDILGKLSEETRGVLEIIPEETIYM 599
Query: 342 FASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPWVSM 379
AC+ ++ R +S E+ LVR + + + P+ +
Sbjct: 600 M---ACKSAIKANRPMSEMEIQSLVRELVKCENPYTCV 634
>gi|440492051|gb|ELQ74651.1| DNA mismatch repair protein - MLH2/PMS1/Pms2 family
[Trachipleistophora hominis]
Length = 609
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 87/179 (48%), Gaps = 21/179 (11%)
Query: 204 IKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQ 263
++KS + +KI+GQFN GFI+ + L I DQHA DE YNFE ++K Q L+ P
Sbjct: 431 VQKSDLKNVKIIGQFNQGFILATLNGYLMIFDQHAVDEIYNFEMIKKGIKFNKQSLLKPI 490
Query: 264 NLHLTKINQCILKDNLPVFYK------NGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDI 317
+L + ++ D+L + + SF+ DD +T+ P D
Sbjct: 491 SL---PSDSMLMSDDLSSPNRLDQAMLSSLNRSFEVKDDK---ITASPSFNKHLFNINDY 544
Query: 318 EELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
EL+ ST S + AS+ACR S+MIG L++ M ++ N+ +D PW
Sbjct: 545 RELV-------STGEV--SSLTNKIASKACRMSIMIGDKLNLCTMNRIIYNLSELDNPW 594
>gi|424834368|ref|ZP_18259079.1| DNA mismatch repair protein [Clostridium sporogenes PA 3679]
gi|365978714|gb|EHN14783.1| DNA mismatch repair protein [Clostridium sporogenes PA 3679]
Length = 664
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 178/392 (45%), Gaps = 60/392 (15%)
Query: 14 HQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATV--KVH--ITDSYAIGFTVDG 69
+ YPF ++ I++ + +DVNV P K ++ E+ + + VH I + FT
Sbjct: 279 NSYPFFVIFIDIFPEYIDVNVHPTKSEVKFKDERAMFKAIFDSVHEAIKEELKESFT--- 335
Query: 70 NNMNQSMEQDPSSDVDMEKIQRSNSEEV--EHETIPVPSEDNSN-----FSHEANLQQSP 122
N N+ D+++ ++S E + E E + +P + N+N F + N P
Sbjct: 336 NFFNKE-------DINIYDSEKSIGETIKTEKEEVQIPIDLNNNNKIHIFGNNINNSTKP 388
Query: 123 ETVEPDTPDETIEV--IDDMPRLQGSYRQSTPVTLSLDIIQDQLKARY------ARRTVQ 174
+EP T +E IE I ++ Y+Q +I ++ Y +
Sbjct: 389 NNIEP-TKNENIEEKNIFEVNNNSSIYKQD-------EIYYNKNNTEYLNSNNNKEESSS 440
Query: 175 AQDRCVENRFHANIDPSKNKEAESELNRVIKK--SMFEKMKIVGQFNLGFIIVKYDSDLF 232
QD N + N +N S +N K + + +KI+GQFN +I+++ D +L+
Sbjct: 441 KQDNKNPNTLYLN----ENYITSSSINIKENKPTNFYIDLKIIGQFNNTYILIEKDKELY 496
Query: 233 IIDQHATDEKYNFETLQ---KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEF 289
IIDQHA EK FE + + + SQ L+ P + L++ I ++N +F +G F
Sbjct: 497 IIDQHAAHEKVLFEKFKSEIEKGYVISQILLSPVVIELSEDEFNIYEENKDIFKNSG--F 554
Query: 290 SFDSSDDGNVLLTSLPMSKNTTLGREDIEEL----LFMLQHTNSTEHCRPSRIRA-MFAS 344
S + + + + +P+ LG+ ++E L L+ L++ S E S I+ A+
Sbjct: 555 SVEVFGECTINIKEVPL----ILGKPNVENLFMDILYNLKNMKSKE---TSTIKYNAIAT 607
Query: 345 RACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
AC+ +V L E+ L+ +M +D P+
Sbjct: 608 LACKSAVKANDTLKEEEIKKLIEDMLILDNPY 639
>gi|168211841|ref|ZP_02637466.1| DNA mismatch repair protein MutL [Clostridium perfringens B str.
ATCC 3626]
gi|170710219|gb|EDT22401.1| DNA mismatch repair protein MutL [Clostridium perfringens B str.
ATCC 3626]
Length = 675
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 93/401 (23%), Positives = 186/401 (46%), Gaps = 46/401 (11%)
Query: 4 VNEVYHQFN-NHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATV--------K 54
V + FN ++PF +L I+ + +DVN+ P K +I E+ + V +
Sbjct: 268 VENAFRSFNVTGKFPFFVLFIDTYPELIDVNIHPTKSEIKFKDERFIFKVVFDAVHSAMR 327
Query: 55 VHITDSYAI------GF-TVDGNNMNQSMEQDPSSDVDM-EKIQRSNSEEVEHETIPV-- 104
++ D++ + F + + +S++++ S+ + E I SE+ + E I
Sbjct: 328 EYVKDTFTLPEEEEKKFEALKEEVIQESLDKEISTLEKLKENINYKVSEDRKKEEIYSYN 387
Query: 105 PSEDNSNFSHEANLQQSPETVEPDTPDETIEVIDDMPRLQGS-YRQ-STPVTLSLD--II 160
PS+D + + + + + + +E+ + + L+ + +++ S +S D +I
Sbjct: 388 PSKD---YEAKTEINIPVDFLSKENQEESFSINNSFNSLENNEFKEVSHKREISYDPILI 444
Query: 161 QDQLKARYARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNL 220
+++LK + V D + + N KN+ S + K++ F K++++GQFN
Sbjct: 445 KNELKDK-----VSETDSLETSDYKCN----KNEHGNSLEETIYKEAKFPKLRVIGQFNK 495
Query: 221 GFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKS---QKLVVPQNLHLTKINQCILKD 277
+I+ +YDS L++IDQHA EK F+ K Q L++P + L + +
Sbjct: 496 TYILAEYDSTLYLIDQHAAHEKILFDKYSSDIAKKKVEIQPLMIPLVVTLPTEDYLYYDE 555
Query: 278 NLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQH--TNSTEHCRP 335
N +F K GF+ S D ++ + +P + E I ++ L+ T T +
Sbjct: 556 NKEIFEKAGFKIS--DFGDNSIRIEEVPYFLDKLNPTELITSMINNLKKMGTGETVEVKY 613
Query: 336 SRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
++I AS +CR +V LS+ EM L++++ I+ P+
Sbjct: 614 NKI----ASMSCRAAVKANDVLSILEMENLIKDLRYINDPF 650
>gi|451820047|ref|YP_007456248.1| DNA mismatch repair protein MutL [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
gi|451786026|gb|AGF56994.1| DNA mismatch repair protein MutL [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
Length = 658
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 95/397 (23%), Positives = 177/397 (44%), Gaps = 55/397 (13%)
Query: 4 VNEVYHQFNN-HQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATV--KVHITDS 60
V + + F+ +++PF IL IE+ + VDVN+ P K ++ + E++L + VH +
Sbjct: 268 VEQAFKSFSTVNKFPFFILYIEVYPEYVDVNIHPTKAEVKFNDERMLFKKIFGAVHTSLK 327
Query: 61 YAIGFTVDGNNMNQSMEQDPS-SDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEAN-- 117
+ T N + P+ ++ + + ++ + ++ E+ + N
Sbjct: 328 NEVFETFAIKEENDNTYTPPTFEEITFKIKEEEEKVKLLNSSVKTMIEEGKDLKVNNNDH 387
Query: 118 --LQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQA 175
+ S T++P I ID+MP++ PV L + I++ V
Sbjct: 388 NIVTYSSNTIQP-----KINHIDNMPKID----VIIPVDLKSNSIEE----------VTV 428
Query: 176 QDRCVENRFHANIDPSKNKEAESELNRVIKKSM-------FEKMKIVGQFNLGFIIVKYD 228
+EN + N+D + E E+ V +++ F + I+GQ+N +I+ +YD
Sbjct: 429 LKESIENPY--NVDNNNEPLQEDEIATVETQNIKPEPIAKFPALSIIGQYNKTYILGEYD 486
Query: 229 SDLFIIDQHATDEKYNFETLQK---TTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKN 285
L++IDQHA EK FE K I Q L+VP + L+ + ++N VF
Sbjct: 487 GTLYMIDQHAAHEKILFEKYLKEIEMGTIIIQPLMVPSIIDLSIDDYSYYEENKDVFKAA 546
Query: 286 GF---EFSFDSSDDGNVL-LTSLPMSKNTTLGREDIEELLF-MLQHTNSTEHCRPSRIR- 339
GF EF GN L L +P LGR + ++L +L + + + + ++
Sbjct: 547 GFLLEEFG------GNSLSLKEVPY----FLGRLNPKDLFLDILDNLKNLGNGKTIEVKH 596
Query: 340 AMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
A++AC+ ++ L + EM L+ ++ ID P+
Sbjct: 597 NAIATKACKAAIKANDKLDINEMVKLIEDLRYIDDPF 633
>gi|150390306|ref|YP_001320355.1| DNA mismatch repair protein [Alkaliphilus metalliredigens QYMF]
gi|167017335|sp|A6TR78.1|MUTL_ALKMQ RecName: Full=DNA mismatch repair protein MutL
gi|149950168|gb|ABR48696.1| DNA mismatch repair protein MutL [Alkaliphilus metalliredigens
QYMF]
Length = 637
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/367 (21%), Positives = 162/367 (44%), Gaps = 37/367 (10%)
Query: 14 HQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMN 73
++YP +LNI++ + D+NV P K +I EK + + ++T + T+ M
Sbjct: 279 NKYPICVLNIKIDPEDADINVHPSKTEIKFHKEKEIYHYIYNYVTQVLSESSTISEIMMI 338
Query: 74 QSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPDET 133
S + +++I S E+I V +D + E E +
Sbjct: 339 PSTKNQHQQHHHLKEINLSQENIQSKESIGVKQQDKVMVADEQ---------EKVKEYNS 389
Query: 134 IEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKN 193
V+D P++ Q P+ +L QL ++ + + VE+R
Sbjct: 390 QYVMDSRPKV-----QPPPMVNTLKTEDTQLNV----ASIISNELPVESR---------G 431
Query: 194 KEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNF----ETLQ 249
+L + K+ + K+VGQ +I+++ D +++IDQHA EK + E L+
Sbjct: 432 IRTNPQLQKNFIKTYLQNYKVVGQLFNTYIVIEKDQSVYLIDQHAAHEKLLYIQFHEELK 491
Query: 250 KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKN 309
K T + SQ+L+ P L + + L +N+ F GFE ++ ++++ ++P+ +
Sbjct: 492 KET-VASQQLLTPVVLEFSHEDYITLIENISEFIPLGFE--LEAFGQNSIIIRAVPLLLD 548
Query: 310 TTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
+D + ++ + +H +P IR R+C++++ L + E+ L+R++
Sbjct: 549 KP---KDYNFIFELIDQVKNEKHVKPDYIREKIIQRSCKEAIKAMDILDIQEIQQLIRDL 605
Query: 370 GRIDQPW 376
+++ P
Sbjct: 606 EKLEPPL 612
>gi|255525227|ref|ZP_05392169.1| DNA mismatch repair protein MutL [Clostridium carboxidivorans P7]
gi|296188727|ref|ZP_06857114.1| DNA mismatch repair protein [Clostridium carboxidivorans P7]
gi|255511090|gb|EET87388.1| DNA mismatch repair protein MutL [Clostridium carboxidivorans P7]
gi|296046654|gb|EFG86101.1| DNA mismatch repair protein [Clostridium carboxidivorans P7]
Length = 633
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 165/374 (44%), Gaps = 55/374 (14%)
Query: 14 HQYPFIILNIEMSRDSVDVNVTPDKRQI-FMDHE---KLLLATVKVHITDSYAIGFTVDG 69
++YPF +L +++ + +DVNV P K +I F D K++ TV + DS F +
Sbjct: 279 NKYPFFVLFLDIFPEYIDVNVHPTKSEIKFRDDREIFKIIFDTVHAALRDSIKDSFNIPV 338
Query: 70 NNMNQSMEQDPSSDVDMEKIQRSNSEEVEH--ETIPVPSEDNSNFSHEANLQQSPETVEP 127
+N + + + + + ++E+ + I +P + NS + H +SP+
Sbjct: 339 EEINNDLPDIGDKNKGEDSLTKDGLGKIENKKDLIQLPIDLNSKWQHN---YESPK---- 391
Query: 128 DTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHAN 187
P SY I++Q++ Y + Q C EN
Sbjct: 392 -------------PAQDKSY------------IKNQIQ-EYNSKDFQL---CKENNELLK 422
Query: 188 IDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFET 247
ID N + E++ + ++ F K+ ++GQF+ +I+ +Y L++IDQHA EK FE
Sbjct: 423 IDS--NCKNENDEKNIEMEAKFPKLNVIGQFHNTYILAQYGDTLYLIDQHAAHEKILFEK 480
Query: 248 LQ---KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSL 304
+ K + +Q L+ P + L + DN +F K G F+ + D + + +
Sbjct: 481 YKNSIKENDVIAQILITPVIIELYHEDFLYYTDNKEIFSKAG--FNIEIFGDNTISIREV 538
Query: 305 PMSKNTTLGREDIEELLF-MLQHTNSTEHCRPSRIRA-MFASRACRKSVMIGRALSVGEM 362
P+ LG+ D++ L +L++ + I+ A AC+ ++ LS EM
Sbjct: 539 PL----ILGKPDVKNLFMDILENLKNMGSGETWTIKYNAIAKLACKAAIKANDNLSNIEM 594
Query: 363 TGLVRNMGRIDQPW 376
LV ++ I+ P+
Sbjct: 595 DALVEDLRFIEDPF 608
>gi|429766909|ref|ZP_19299149.1| DNA mismatch repair protein [Clostridium celatum DSM 1785]
gi|429182792|gb|EKY23875.1| DNA mismatch repair protein [Clostridium celatum DSM 1785]
Length = 651
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 167/376 (44%), Gaps = 41/376 (10%)
Query: 14 HQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMN 73
+++PF +L I++S +SVDVN+ P K +I E+++ V + ++
Sbjct: 279 NKFPFFVLFIDVSPESVDVNIHPTKAEIKFKDERIVYKRV---------------FDAIH 323
Query: 74 QSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPDET 133
++++D I + N EE E + + +N + + E + + ++E T
Sbjct: 324 SALKEDIFKSFSENSI-KENQEEFEEIKLNIEENNNPSVNEEVIISKREPSIENVYNSVT 382
Query: 134 IEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVE--------NRFH 185
IE + L + T QD A T + ++ E N++
Sbjct: 383 IEDVIKEEELYNKLKNLNKDT------QDGKNAENNSITSENKNSISEILIKDNEDNKYR 436
Query: 186 ANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNF 245
+ + N+ ++L K F K++I+GQFN +I+ ++ L+IIDQHA EK +
Sbjct: 437 DSDNIIDNEVNIAKLEIDNKTPKFPKLRIIGQFNKTYILAEHLDTLYIIDQHAAHEKIIY 496
Query: 246 ETLQK---TTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLT 302
E K I Q L++P + L+ + K+N+ +F +G F+ + + L
Sbjct: 497 EKYVKDIENKEIVVQSLLIPCIVDLSFDDFECYKENIDIFINSG--FTIEEFGGNTIALK 554
Query: 303 SLPMSKNTTLGREDIEELLF-MLQHTNSTEHCRPSRIRA-MFASRACRKSVMIGRALSVG 360
+P LG+ D + LL M+ + + + + ++ AS ACRK+V L+
Sbjct: 555 EVPY----FLGKLDAKNLLLEMIDNLKNLGSGKTTEVKLNKIASMACRKAVKANDYLTQI 610
Query: 361 EMTGLVRNMGRIDQPW 376
EM L+ ++ ID P+
Sbjct: 611 EMEKLISDLRYIDNPF 626
>gi|400180290|gb|AFP73274.1| DNA mismatch repair protein, partial [Trichomonas vaginalis]
Length = 149
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 74/153 (48%), Gaps = 4/153 (2%)
Query: 224 IVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFY 283
I KY D++ IDQHA E NFE L+K I+SQ+L+ P + T +D
Sbjct: 1 ITKYGCDIYAIDQHAAMEAQNFEKLRKKCSIQSQRLISPIVISATPQEISAAEDCKQKCK 60
Query: 284 KNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFA 343
+ G+++ D ++L+ +P G +D+ EL+ ML H + + R A
Sbjct: 61 EFGYDYDI---SDNSILVKKIPSITTVATGSDDLLELITML-HESPASQPMTRKARIWMA 116
Query: 344 SRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
RAC SV +G ++ +M L+ M + D PW
Sbjct: 117 YRACHSSVRVGDTMNHSQMKDLLNRMAQSDFPW 149
>gi|400180286|gb|AFP73272.1| DNA mismatch repair protein, partial [Trichomonas vaginalis]
Length = 149
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 74/153 (48%), Gaps = 4/153 (2%)
Query: 224 IVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFY 283
I KY D++ IDQHA E NFE L+K I+SQ+L+ P + T +D
Sbjct: 1 ITKYGCDIYAIDQHAAMEAQNFEKLRKKCSIQSQRLISPIVISATPQEISAAEDCKQKCK 60
Query: 284 KNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFA 343
+ G+++ D ++L+ +P G +D+ EL+ ML H + + R A
Sbjct: 61 EFGYDYDI---SDNSILVKKIPSITTVATGSDDLLELITML-HESPASQPMTRKARIWMA 116
Query: 344 SRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
RAC SV +G ++ +M L+ M + D PW
Sbjct: 117 YRACHSSVRVGDTMNNSQMKDLLNRMAQSDFPW 149
>gi|187779608|ref|ZP_02996081.1| hypothetical protein CLOSPO_03204 [Clostridium sporogenes ATCC
15579]
gi|187773233|gb|EDU37035.1| DNA mismatch repair domain protein [Clostridium sporogenes ATCC
15579]
Length = 664
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 96/392 (24%), Positives = 178/392 (45%), Gaps = 60/392 (15%)
Query: 14 HQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATV--KVH--ITDSYAIGFTVDG 69
+ YPF ++ I++ + +DVNV P K ++ E+ + + VH I + FT
Sbjct: 279 NSYPFFVIFIDIFPEYIDVNVHPTKSEVKFKDERAMFKAIFDAVHEAIKEELKESFT--- 335
Query: 70 NNMNQSMEQDPSSDVDMEKIQRSNSEEV--EHETIPVPSEDNSN-----FSHEANLQQSP 122
N N+ D+++ ++S E + E E + +P + N+N F + N
Sbjct: 336 NFFNKE-------DINIYDSEKSMGETIKTEKEEVQIPIDLNNNNKIHIFGNNINSSTKT 388
Query: 123 ETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARY------ARRTVQAQ 176
+EP DE IE + ++ ++ ++ ++ Y + Q
Sbjct: 389 NNIEP-AKDENIE-----GKNIFEINNNSSISKQDEVYYNKNNTEYLNSNNNKEESSSKQ 442
Query: 177 DRCVENRFHANIDPSKNKEAESELNRVIKKS----MFEKMKIVGQFNLGFIIVKYDSDLF 232
D N + N +N S +N IK++ + MKI+GQFN +I+++ D +L+
Sbjct: 443 DNKNPNTLYIN----ENDTTSSSIN--IKENNPTNFYIDMKIIGQFNNTYILIEKDKELY 496
Query: 233 IIDQHATDEKYNFETLQ---KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEF 289
IIDQHA EK FE + + + SQ L+ P + L++ I ++N +F +G F
Sbjct: 497 IIDQHAAHEKVLFEKFKSEIEKGYVISQILLSPVVIELSEDEFNIYEENKYIFKNSG--F 554
Query: 290 SFDSSDDGNVLLTSLPMSKNTTLGREDIEEL----LFMLQHTNSTEHCRPSRIRA-MFAS 344
S ++ + + + +P+ LG+ ++E L L+ L++ S E S I+ A+
Sbjct: 555 SVEAFGEYTINIKEVPL----ILGKPNVENLFMDILYNLKNMKSKE---TSTIKYNAIAT 607
Query: 345 RACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
AC+ +V L E+ L+ +M +D P+
Sbjct: 608 LACKSAVKANDTLKEEEIKKLIEDMLILDNPY 639
>gi|400180288|gb|AFP73273.1| DNA mismatch repair protein, partial [Trichomonas vaginalis]
Length = 149
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 78/154 (50%), Gaps = 6/154 (3%)
Query: 224 IVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFY 283
I KY D++ IDQHA E NFE L+K I+SQ+L+ P + T +D
Sbjct: 1 ITKYGCDIYAIDQHAAMEAQNFEKLRKKCSIQSQRLISPIVISATPQEISAAEDCKQKCK 60
Query: 284 KNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTE-HCRPSRIRAMF 342
+ G+++ D ++L+ +P G +D+ EL+ ML + +++ R +RI
Sbjct: 61 EFGYDYDI---SDNSILVKKIPSITTVATGSDDLLELITMLHESPASQPMTRNARI--WM 115
Query: 343 ASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
A RAC SV +G ++ +M L+ M + D PW
Sbjct: 116 AYRACHSSVRVGDTMNNSQMKDLLNRMAQSDFPW 149
>gi|400180304|gb|AFP73281.1| DNA mismatch repair protein, partial [Trichomonas vaginalis]
Length = 149
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 78/154 (50%), Gaps = 6/154 (3%)
Query: 224 IVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFY 283
I KY D++ IDQHA E NFE L+K I+SQ+L+ P + T +D
Sbjct: 1 ITKYGCDIYAIDQHAAMEAQNFEKLRKKCSIQSQRLISPIVISATPQEISAAEDCKQKCK 60
Query: 284 KNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTE-HCRPSRIRAMF 342
+ G+++ D ++L+ +P G +D+ EL+ ML + +++ R +RI
Sbjct: 61 EFGYDYDI---SDNSILVKKIPSITTVATGSDDLLELITMLHESPASQPMTRNARI--WM 115
Query: 343 ASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
A RAC SV +G ++ +M L+ M + D PW
Sbjct: 116 AYRACHSSVRVGDTMNHSQMKDLLNRMAQSDFPW 149
>gi|400180292|gb|AFP73275.1| DNA mismatch repair protein, partial [Trichomonas vaginalis]
Length = 149
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 76/158 (48%), Gaps = 14/158 (8%)
Query: 224 IVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLT-----KINQCILKDN 278
I KY D++ IDQHA E NFE L+K I+SQ+L+ P + T +C K
Sbjct: 1 ITKYGCDIYAIDQHAAMEAQNFEKLRKKCSIQSQRLISPIVISATPQEISAAEECKQK-- 58
Query: 279 LPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRI 338
F + +D SD+ ++L+ +P G +D+ EL+ ML H + +
Sbjct: 59 -----CKEFGYDYDISDN-SILVKKIPSITTVATGSDDLLELITML-HESPASQPMTRKA 111
Query: 339 RAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
R A RAC SV +G ++ +M L+ M + D PW
Sbjct: 112 RIWMAYRACHSSVRVGDTMNHSQMKDLLNRMAQSDFPW 149
>gi|400180294|gb|AFP73276.1| DNA mismatch repair protein, partial [Trichomonas vaginalis]
gi|400180296|gb|AFP73277.1| DNA mismatch repair protein, partial [Trichomonas vaginalis]
Length = 149
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 76/158 (48%), Gaps = 14/158 (8%)
Query: 224 IVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLT-----KINQCILKDN 278
I KY D++ IDQHA E NFE L+K I+SQ+L+ P + T +C K
Sbjct: 1 ITKYGCDIYAIDQHAAMEAQNFEKLRKKCSIQSQRLISPIVISATPQEISAAEECKQK-- 58
Query: 279 LPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRI 338
F + +D SD+ ++L+ +P G +D+ EL+ ML H + +
Sbjct: 59 -----CKEFGYDYDISDN-SILVKKIPSITTVATGSDDLLELITML-HESPASQPMTRKA 111
Query: 339 RAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
R A RAC SV +G ++ +M L+ M + D PW
Sbjct: 112 RIWMAYRACHSSVRVGDTMNNSQMKDLLNRMAQSDFPW 149
>gi|242065626|ref|XP_002454102.1| hypothetical protein SORBIDRAFT_04g024570 [Sorghum bicolor]
gi|241933933|gb|EES07078.1| hypothetical protein SORBIDRAFT_04g024570 [Sorghum bicolor]
Length = 780
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 46/66 (69%)
Query: 214 IVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQC 273
+VGQFNLGFII K D DLFI+DQHA DEKYNFE L ++T + Q L+ P L L+ +
Sbjct: 710 VVGQFNLGFIIGKLDQDLFIVDQHAADEKYNFECLSQSTTLNIQPLLQPLRLDLSPEEEV 769
Query: 274 ILKDNL 279
I+ N+
Sbjct: 770 IVSMNM 775
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 39/61 (63%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
KLVNE+Y N QYP +IL+ + S DVNV PDKR++F E L+L +++ + + Y
Sbjct: 291 KLVNELYKSSNAKQYPVVILDFRIPTTSYDVNVAPDKRKVFFSSESLILQSLREAVENLY 350
Query: 62 A 62
+
Sbjct: 351 S 351
>gi|410671190|ref|YP_006923561.1| DNA mismatch repair protein MutL [Methanolobus psychrophilus R15]
gi|409170318|gb|AFV24193.1| DNA mismatch repair protein MutL [Methanolobus psychrophilus R15]
Length = 623
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/376 (20%), Positives = 151/376 (40%), Gaps = 65/376 (17%)
Query: 8 YHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTV 67
Y +YP L ++ VDVNV P KR++ + HEK + + + + + + +
Sbjct: 282 YTLLPKGRYPAAFLKFDIDPVHVDVNVHPTKREVRLSHEKEIESAIIAAVEQALSTASLI 341
Query: 68 DGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEP 127
P V E +S E E +PV ++ + E+ Q++ +
Sbjct: 342 ------------PELRVTKESTLQSKIYEPEPAGLPVEKKEVGEYHPESREQRAED---- 385
Query: 128 DTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHAN 187
YRQ I ++ RY + Q + E +
Sbjct: 386 -------------------YRQGKHQEEPALIKENSQPYRYPMKDTQKRLTKSERLQAQH 426
Query: 188 IDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFET 247
+ P ++K +K++GQF+ +II + + L ++DQHA E+ +E
Sbjct: 427 VPP-------------VRKGEVPDVKVLGQFSDLYIITETEGKLVLVDQHAAHERIMYEQ 473
Query: 248 LQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMS 307
+ + + Q+L+ P L L+ I++D +P + G FS G+ ++T++P
Sbjct: 474 VLRMRDMGWQELITPVTLELSTKEMAIIEDYIPFLEQIG--FSISEFGPGSYVVTTVP-- 529
Query: 308 KNTTLGREDIEELLFMLQHTNSTEHCRPSRIRA-------MFASRACRKSVMIGRALSVG 360
+ GR + E++ H ++ RI+ + ++ ACR ++ G +
Sbjct: 530 --SIFGRLEDPEIV----HDIISDLVSGGRIKEDTQVYDRLCSTMACRAAIKAGAVCTQE 583
Query: 361 EMTGLVRNMGRIDQPW 376
+M GL+R + D P+
Sbjct: 584 QMLGLLRQLMLCDNPY 599
>gi|422874018|ref|ZP_16920503.1| DNA mismatch repair protein [Clostridium perfringens F262]
gi|380305013|gb|EIA17296.1| DNA mismatch repair protein [Clostridium perfringens F262]
Length = 675
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/401 (21%), Positives = 168/401 (41%), Gaps = 46/401 (11%)
Query: 4 VNEVYHQFN-NHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATV--------K 54
V + FN ++PF +L I+ + +DVN+ P K +I E+ + V +
Sbjct: 268 VENAFRSFNVTGKFPFFVLFIDTYPELIDVNIHPTKSEIKFKDERFIFKVVFDAVHSAMR 327
Query: 55 VHITDSYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSED-NSNFS 113
++ D++ + E+ + E IQ S +E+ T+ E+ N
Sbjct: 328 EYVKDTFTL----------PEEEEKKFEALKEEVIQESLDKEIS--TLEKLKENINYKVV 375
Query: 114 HEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTV 173
+E ++ + P E ++ Q +++ + ++ K A+R +
Sbjct: 376 NEDKRKEEIYSYNPSKDYEAKTEVNIPVDFLSKENQDESFSINNSLENNEFKEASAKREI 435
Query: 174 QAQDRCVENRFHANIDP-------------SKNKEAESELNRVIKKSMFEKMKIVGQFNL 220
++N + +KN+ S + +++ F K++++GQFN
Sbjct: 436 SYDPILIKNELKDKVSESTSESLESSDYKCNKNEYGNSLEEIIYREAKFPKLRVIGQFNK 495
Query: 221 GFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKS---QKLVVPQNLHLTKINQCILKD 277
+I+ +YDS L++IDQHA EK FE K Q L++P + L + +
Sbjct: 496 TYILAEYDSTLYLIDQHAAHEKILFEKYSSDIAKKKVEIQTLMIPLVVTLPTEDYLYYDE 555
Query: 278 NLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQH--TNSTEHCRP 335
N +F K GF+ S D ++ + +P + E I ++ L+ T T +
Sbjct: 556 NKEIFEKAGFKIS--DFGDNSIRIEEVPYFLDKLNPTELITSMINNLKKMGTGETVEVKY 613
Query: 336 SRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
++I AS +CR +V LS+ EM L+ ++ I+ P+
Sbjct: 614 NKI----ASMSCRAAVKANDVLSILEMENLIEDLRYINDPF 650
>gi|83032814|ref|XP_729204.1| DNA mismatch repair protein [Plasmodium yoelii yoelii 17XNL]
gi|23486315|gb|EAA20769.1| DNA mismatch repair protein, C-terminal domain, putative [Plasmodium
yoelii yoelii]
Length = 1157
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 102/273 (37%), Gaps = 100/273 (36%)
Query: 204 IKKSMFEKMKIVGQFNLGFIIVKYD------------------------------SDLFI 233
K ++F+K+KI GQFN GFI+ K D LFI
Sbjct: 814 FKSNLFKKLKICGQFNKGFILSKIDLLYFKNEDNKSKNNDMNETDENENVDRKNNYALFI 873
Query: 234 IDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGF------ 287
IDQHA DEK NFE K +KSQKL+ L L+ I++ N +F +NGF
Sbjct: 874 IDQHAADEKSNFEKYNKIFTMKSQKLINKIELELSPAQIHIIEKNFVIFLRNGFEIEIIE 933
Query: 288 ------------------EFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQH--- 326
S ++ + V L SLP+ L D LL L +
Sbjct: 934 EPINKKRKINNDENNDENIISEETLMEMKVYLLSLPVFNGKILEVVDFMSLLHHLTNHPI 993
Query: 327 -----------------TNSTEHC------RPSRIRAMFASR------------------ 345
++TE RP ++ + AS+
Sbjct: 994 IFDKQIDNSFFRNNQKLIDNTETWFNYNFPRPQKVWKILASKYVSFCTVTVPLYLFSPLF 1053
Query: 346 --ACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
ACR +VM+G+ L++ EM + + + + PW
Sbjct: 1054 VSACRNAVMVGKTLNISEMIRIKKKLSVLQNPW 1086
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHI 57
K++N +Y +FN+ YP II NI ++D+NVTPDKR++F E L +K +
Sbjct: 277 KIINTIYREFNSRLYPIIIFNILSDSKNIDINVTPDKREVFFTFENELCEEIKTEL 332
>gi|374724183|gb|EHR76263.1| DNA mismatch repair protein MutL [uncultured marine group II
euryarchaeote]
Length = 674
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 96/392 (24%), Positives = 166/392 (42%), Gaps = 53/392 (13%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMNQ 74
++P +L++ + VDVNV P KR++ + H +L ++ AI T+ +
Sbjct: 287 RHPLAVLSLHLPPSEVDVNVHPTKREVRLRHSWRVLERLE------RAIAHTL------E 334
Query: 75 SMEQDPSSDVDMEKIQRSNSEEV----EH-ETIPVPSEDNSNFSHEANLQQSP------E 123
S+ +P + + +Q + +V EH + P P + ++ A +P E
Sbjct: 335 SVPTEPDAAGGIPGLQGLSQSQVPSIQEHFKPKPAPQQADAVDPMAAAAGTTPILLPRKE 394
Query: 124 TVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCV--- 180
+V P P I + L G +S P + + Q A A+ T+ D
Sbjct: 395 SVSPSPPAWAIAAGAQL-NLHGGEAESAPKPVKQ---RPQSTAPSAQNTLPGMDEKPTAP 450
Query: 181 -------ENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFI 233
E HA + ES L +I + +M+ + QF +I+V+ + +L +
Sbjct: 451 ALSPAERELHRHAGQGVRSSPSDESPLGPIINE--LPEMEPLAQFADSYILVQAEDELLL 508
Query: 234 IDQHATDEKYNFETLQKT-TLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFD 292
IDQHA E+ +E L+ ++ SQ + P L+L ++ F GFE
Sbjct: 509 IDQHALHERVRYERLRNNESIWASQTRLEPLPLNLDARQSVRMEAAQDTFRTVGFEVQ-- 566
Query: 293 SSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRP-----SRIRAMFASRAC 347
SS+ G +L + + + G+E I +L +LQ T +E P R + AC
Sbjct: 567 SSEQGWSVLAAPQLLE----GKEVIPFMLDLLQDT--SEDGAPLTTVDDRKDHLAFLNAC 620
Query: 348 RKSVMIGRALSVGEMTGLVRNMGRIDQPWVSM 379
R +V L++ EM L+ +M RI PW +
Sbjct: 621 RGAVKANEKLTLPEMRRLLDDMRRIPNPWACV 652
>gi|303232202|ref|ZP_07318905.1| DNA mismatch repair protein, C-terminal domain protein [Veillonella
atypica ACS-049-V-Sch6]
gi|302513308|gb|EFL55347.1| DNA mismatch repair protein, C-terminal domain protein [Veillonella
atypica ACS-049-V-Sch6]
Length = 652
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 93/400 (23%), Positives = 171/400 (42%), Gaps = 58/400 (14%)
Query: 1 MKLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITD 59
+K ++ YH YP ++L+I + VD+NV P K ++ + +K++ V I +
Sbjct: 265 LKAIDNAYHALLPKSGYPLVLLHITVPASMVDINVHPRKSEVKFEDDKIIFKAVYHAILN 324
Query: 60 SYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANL- 118
+ N +++ E++ SS + + S ++ V S+ N H A
Sbjct: 325 AL-------NNPLHERYERESSSFTQPLETESQGSGYNSYQAPQVLSDHNDTAEHIATAI 377
Query: 119 ----------QQSPETVEPDTPDETIEVIDDM-------PRLQGSYRQSTPVTLSLDIIQ 161
+ E + DT D +D + P + +Y Q T S +
Sbjct: 378 DYDKVFGGRRTKGYEVLRQDTRD----FVDALKEKGFTPPAPKATYEQETFEESSFTSVP 433
Query: 162 DQLKARYARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLG 221
A + A+D+ +FH + + E E +R I+KS F M GQ
Sbjct: 434 T------AYTSYTAEDK---EKFHQ----IQEQHIEDE-SRDIQKSGFLPM---GQVASC 476
Query: 222 FIIVKYDSDLFIIDQHATDEKYNFETLQKTT-LIKSQKLVVPQNLHLTKINQCILKDNLP 280
+I+ K DL+IIDQHA E+ ++ L K++ I Q L+VP + T+ ++++
Sbjct: 477 YILAKKGDDLYIIDQHAAHERVRYDRLCKSSEAIPMQSLLVPTYSNATEDEMNLVENEQD 536
Query: 281 VFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIR- 339
GFE + + L P+ + +E I +F H +H +P++ +
Sbjct: 537 ALLDLGFEVELGGPN--QIKLVGAPVDLVESKAQE-ILSYVFTFLH----DHEQPTKAQL 589
Query: 340 --AMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPWV 377
M A +CR ++ G L++ +MT L+ ++ D+P+V
Sbjct: 590 RHEMLAYASCRGAIKSGHNLNMYQMTTLIEDLFHTDKPYV 629
>gi|160914742|ref|ZP_02076956.1| hypothetical protein EUBDOL_00749 [Eubacterium dolichum DSM 3991]
gi|158433282|gb|EDP11571.1| DNA mismatch repair domain protein [Eubacterium dolichum DSM 3991]
Length = 659
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 91/385 (23%), Positives = 175/385 (45%), Gaps = 50/385 (12%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEK----LLLATVKVHITDSYAIGFTVDGN 70
+YP ++N+EM VDVNV P K +I + EK LL T+K + +
Sbjct: 278 RYPIAVINMEMDAQLVDVNVHPSKWEIRLSKEKQLEKLLYQTIKAALMQDMEV------P 331
Query: 71 NMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSH-----------EANLQ 119
N+ Q+ +++ ++++++Q + + E + +E N +F H E+ +Q
Sbjct: 332 NI-QARKENKKEKIEIQELQFTYPRD--QEVKKLHTEVNDSFVHYNGKPKQTITEESKVQ 388
Query: 120 QSPETVEP-DTP--DETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQ 176
+ VEP + P E E +D L S T + +I++ + A +
Sbjct: 389 --VDKVEPQEAPVEAEKQESVDKKQELSESQSSDTQAPIKDQVIEEVSTTKQAETLFKDI 446
Query: 177 DRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQ 236
E A +P A +N ++ ++GQF+ +I+ + + L+IIDQ
Sbjct: 447 VPIQEVVMKAEQEP-----ASESIN-----PSLPQLHVIGQFHNSYILAEGEKGLYIIDQ 496
Query: 237 HATDEKYNFETLQKTTL--IK-SQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDS 293
HA E+Y++E +QK L +K +Q L++P + T I+ D+L + F+
Sbjct: 497 HAAQERYHYEMIQKQILSGVKDTQPLLIPITVE-TTISAVSRIDDLNALLEQ-VGIHFEV 554
Query: 294 SDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTN--STEHCRPSRIRAMFASRACRKSV 351
+ +L LP+ T +++++ + Q + S + R I A+ AC S+
Sbjct: 555 FGNTTLLCRELPIWLKDTKEEAFLQDMIDLWQKDDEISLDKLRKHTI----ATMACHSSI 610
Query: 352 MIGRALSVGEMTGLVRNMGRIDQPW 376
R+L++ EM ++ ++G+ +QP+
Sbjct: 611 RFHRSLTMEEMKQVILDLGKCEQPF 635
>gi|400180306|gb|AFP73282.1| DNA mismatch repair protein, partial [Trichomonas vaginalis]
Length = 149
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 73/153 (47%), Gaps = 4/153 (2%)
Query: 224 IVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFY 283
I KY D++ IDQHA E NFE L+K I+SQ+L+ P + T +D
Sbjct: 1 ITKYGCDIYAIDQHAAMEAQNFEKLRKKCSIQSQRLISPIVISATPQEISAAEDCKQKCK 60
Query: 284 KNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFA 343
+ G+++ D ++ + +P G +D+ EL+ ML H + + R A
Sbjct: 61 EFGYDYDI---SDNSIHVKKIPSITTVATGSDDLLELITML-HESPASQPMTRKARIWMA 116
Query: 344 SRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
RAC SV +G ++ +M L+ M + D PW
Sbjct: 117 YRACHSSVRVGDTMNNSQMKDLLNRMAQSDFPW 149
>gi|168180372|ref|ZP_02615036.1| DNA mismatch repair protein [Clostridium botulinum NCTC 2916]
gi|226949040|ref|YP_002804131.1| DNA mismatch repair protein [Clostridium botulinum A2 str. Kyoto]
gi|254766164|sp|C1FNT8.1|MUTL_CLOBJ RecName: Full=DNA mismatch repair protein MutL
gi|182668696|gb|EDT80674.1| DNA mismatch repair protein [Clostridium botulinum NCTC 2916]
gi|226840747|gb|ACO83413.1| DNA mismatch repair protein MutL [Clostridium botulinum A2 str.
Kyoto]
Length = 666
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 181/391 (46%), Gaps = 56/391 (14%)
Query: 14 HQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATV--KVH--ITDSYAIGFTVDG 69
+ YPF ++ I++ + +DVNV P K ++ E+ + T+ VH I FT
Sbjct: 279 NSYPFFVIFIDIFPEYIDVNVHPTKSEVKFKDERAMFKTIFDAVHEAIKGELKESFT--- 335
Query: 70 NNMNQSMEQDPSSDVDMEKIQRSNSEEV--EHETIPVPSEDNSN-----FSHEANLQQSP 122
N N+ D++M ++S +E + E E + +P + NSN F + N+ + P
Sbjct: 336 NFFNKE-------DINMYDSEKSIAETIKLEKEEVQIPIDLNSNNKIDIFGN--NINKLP 386
Query: 123 ETVE--PDTPDETIEVIDDMPRLQGSYRQSTPVTLSLD-IIQDQLKARYAR--RTVQAQD 177
E + + +++ S + T D + K Y++ + +Q +
Sbjct: 387 NNAELLKNIGIKEKNTLENNNNFYTSKQNEICYTNKNDECLNSCNKDDYSKIEKPLQKDN 446
Query: 178 RCVE----NRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFI 233
+ ++ N + N P KE + + + MKI+GQFN +I+++ D +L+I
Sbjct: 447 KNLDALYLNEHNTNSSPINIKENKPN-------NFYVDMKIIGQFNNTYILIEKDKELYI 499
Query: 234 IDQHATDEKYNFETLQ---KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFS 290
IDQHA EK FE + + + SQ L+ P + L++ I ++N +F +G FS
Sbjct: 500 IDQHAAHEKVLFEKFKSEIEKGYVISQILLSPVVIELSEDEFNIYEENKDIFKNSG--FS 557
Query: 291 FDSSDDGNVLLTSLPMSKNTTLGREDIEEL----LFMLQHTNSTEHCRPSRIRA-MFASR 345
++ + + + +P+ LG+ ++E+L L+ L++ S E S I+ A+
Sbjct: 558 VETFGECTINIKEVPL----ILGKPNVEDLFMDILYNLKNMKSKE---TSTIKYNAIATL 610
Query: 346 ACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
AC+ +V L E+ L+ NM ++ P+
Sbjct: 611 ACKSAVKANDNLKEEEIKKLIENMLTLNNPY 641
>gi|400180284|gb|AFP73271.1| DNA mismatch repair protein, partial [Trichomonas vaginalis]
gi|400180302|gb|AFP73280.1| DNA mismatch repair protein, partial [Trichomonas vaginalis]
Length = 149
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 75/158 (47%), Gaps = 14/158 (8%)
Query: 224 IVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLT-----KINQCILKDN 278
I KY D++ IDQHA E NFE L+K I+SQ+L+ P + T +C K
Sbjct: 1 ITKYGCDIYAIDQHAAMEAQNFEKLRKKCSIQSQRLISPIVISATPQEISAAEECKQK-- 58
Query: 279 LPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRI 338
F + +D SD+ ++ + +P G +D+ EL+ ML H + +
Sbjct: 59 -----CKEFGYDYDISDN-SIHVKKIPSITTVATGSDDLLELITML-HESPASQPMTRKA 111
Query: 339 RAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
R A RAC SV +G ++ +M L+ M + D PW
Sbjct: 112 RIWMAYRACHSSVRVGDTMNHSQMKDLLNRMAQSDFPW 149
>gi|400180298|gb|AFP73278.1| DNA mismatch repair protein, partial [Trichomonas vaginalis]
Length = 149
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 75/158 (47%), Gaps = 14/158 (8%)
Query: 224 IVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLT-----KINQCILKDN 278
I KY D++ IDQHA E NFE L+K I+SQ+L+ P + T +C K
Sbjct: 1 ITKYGCDIYAIDQHAAMEAQNFEKLRKKCSIQSQRLISPIVISATPQEISAAEECKQK-- 58
Query: 279 LPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRI 338
F + +D SD+ ++ + +P G +D+ EL+ ML H + +
Sbjct: 59 -----CKEFGYDYDISDN-SIHVKKIPSITTVATGSDDLLELITML-HESPASQPMTRKA 111
Query: 339 RAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
R A RAC SV +G ++ +M L+ M + D PW
Sbjct: 112 RIWMAYRACHSSVRVGDTMNNSQMKDLLNRMAQSDFPW 149
>gi|380743034|gb|AFE18930.1| PMS1-like protein, partial [Trichomonas vaginalis]
Length = 496
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 69/129 (53%), Gaps = 3/129 (2%)
Query: 203 VIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVP 262
I+ F+ M+I+GQ+N FII KY D++ IDQHA E NFE L+K I+SQ+L+ P
Sbjct: 364 AIETKAFKDMEIIGQWNQSFIITKYGCDIYAIDQHAAMEAQNFEKLRKKCSIQSQRLIFP 423
Query: 263 QNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLF 322
+ T +D + G+++ D ++L+ +P G +D+ EL+
Sbjct: 424 IVISATPQEISAAEDCKQKCKEFGYDYDI---SDNSILVKKIPSITTVATGSDDLLELIT 480
Query: 323 MLQHTNSTE 331
ML + +++
Sbjct: 481 MLHESPASQ 489
>gi|421837498|ref|ZP_16271661.1| DNA mismatch repair protein [Clostridium botulinum CFSAN001627]
gi|409740344|gb|EKN40646.1| DNA mismatch repair protein [Clostridium botulinum CFSAN001627]
Length = 666
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 97/397 (24%), Positives = 182/397 (45%), Gaps = 68/397 (17%)
Query: 14 HQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATV--KVH--ITDSYAIGFTVDG 69
+ YPF ++ I++ + +DVNV P K ++ E+ + T+ VH I FT
Sbjct: 279 NSYPFFVIFIDIFPEYIDVNVHPTKSEVKFKDERAMFKTIFDAVHEAIKGELKESFT--- 335
Query: 70 NNMNQSMEQDPSSDVDMEKIQRSNSE--EVEHETIPVPSEDNSN-----FSHEANLQQSP 122
N N+ D+++ ++S +E ++E E + +P + NSN F + N+ + P
Sbjct: 336 NFFNKE-------DINIYDSEKSITEPIKLEKEEVQIPIDLNSNNKIDIFGN--NINKLP 386
Query: 123 ETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVEN 182
E + + G ++T + Q + YA + + + C ++
Sbjct: 387 NNTE-------------LLKNIGIKEKNTLENNNDFYTSKQNEIYYANKNDECLNSCNKD 433
Query: 183 RFHANIDP----SKNKEA---------ESELNRVIKK--SMFEKMKIVGQFNLGFIIVKY 227
+ P +KN +A S +N K + + MKI+GQFN +I+++
Sbjct: 434 NYSKIEKPLQKDNKNLDALYLNEHNTNSSPINIKENKPNNFYVDMKIIGQFNNTYILIEK 493
Query: 228 DSDLFIIDQHATDEKYNFETLQ---KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYK 284
D +L+IIDQHA EK FE + + + SQ L+ P + L++ I ++N +F
Sbjct: 494 DKELYIIDQHAAHEKVLFEKFKSEIEKGYVISQILLSPVVIELSEDEFNIYEENKDIFKN 553
Query: 285 NGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEEL----LFMLQHTNSTEHCRPSRIRA 340
+G FS ++ + + + +P+ LG+ ++E+L L+ L++ S E S I+
Sbjct: 554 SG--FSVETFGECTINIKEVPL----ILGKPNVEDLFMDILYNLKNMKSKE---TSTIKY 604
Query: 341 -MFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
A+ AC+ +V L E+ L+ NM ++ P+
Sbjct: 605 NAIATLACKSAVKANDNLKEEEIKKLIENMLTLNNPY 641
>gi|380743090|gb|AFE18958.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743194|gb|AFE19010.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743256|gb|AFE19041.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743266|gb|AFE19046.1| PMS1-like protein, partial [Trichomonas vaginalis]
Length = 496
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 69/129 (53%), Gaps = 3/129 (2%)
Query: 203 VIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVP 262
I+ F+ M+I+GQ+N FII KY D++ IDQHA E NFE L+K I+SQ+L+ P
Sbjct: 364 AIETKAFKDMEIIGQWNQSFIITKYGCDIYAIDQHAAMEAQNFEKLRKKCSIQSQRLISP 423
Query: 263 QNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLF 322
+ T +D + G+++ D ++L+ +P G +D+ EL+
Sbjct: 424 IVISATPQEISAAEDCKQKCKEFGYDYDI---SDNSILVKKIPSITTVATGSDDLLELIT 480
Query: 323 MLQHTNSTE 331
ML + +++
Sbjct: 481 MLHESPASQ 489
>gi|380743140|gb|AFE18983.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743174|gb|AFE19000.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743196|gb|AFE19011.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743218|gb|AFE19022.1| PMS1-like protein, partial [Trichomonas vaginalis]
Length = 496
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 69/129 (53%), Gaps = 3/129 (2%)
Query: 203 VIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVP 262
I+ F+ M+I+GQ+N FII KY D++ IDQHA E NFE L+K I+SQ+L+ P
Sbjct: 364 AIETKAFKDMEIIGQWNQSFIITKYGCDIYAIDQHAAMEAQNFEKLRKKCSIQSQRLISP 423
Query: 263 QNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLF 322
+ T +D + G+++ D ++L+ +P G +D+ EL+
Sbjct: 424 IVISATPQEISAAEDCKQKCKEFGYDYDI---SDNSILVKKIPSITTVATGSDDLLELIT 480
Query: 323 MLQHTNSTE 331
ML + +++
Sbjct: 481 MLHESPASQ 489
>gi|380743062|gb|AFE18944.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743080|gb|AFE18953.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743106|gb|AFE18966.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743114|gb|AFE18970.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743122|gb|AFE18974.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743124|gb|AFE18975.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743130|gb|AFE18978.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743156|gb|AFE18991.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743158|gb|AFE18992.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743160|gb|AFE18993.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743172|gb|AFE18999.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743178|gb|AFE19002.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743204|gb|AFE19015.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743280|gb|AFE19053.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743290|gb|AFE19058.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743292|gb|AFE19059.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743300|gb|AFE19063.1| PMS1-like protein, partial [Trichomonas vaginalis]
Length = 496
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 69/129 (53%), Gaps = 3/129 (2%)
Query: 203 VIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVP 262
I+ F+ M+I+GQ+N FII KY D++ IDQHA E NFE L+K I+SQ+L+ P
Sbjct: 364 AIETKAFKDMEIIGQWNQSFIITKYGCDIYAIDQHAAMEAQNFEKLRKKCSIQSQRLISP 423
Query: 263 QNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLF 322
+ T +D + G+++ D ++L+ +P G +D+ EL+
Sbjct: 424 IVISATPQEISAAEDCKQKCKEFGYDYDI---SDNSILVKKIPSITTVATGSDDLLELIT 480
Query: 323 MLQHTNSTE 331
ML + +++
Sbjct: 481 MLHESPASQ 489
>gi|380743214|gb|AFE19020.1| PMS1-like protein, partial [Trichomonas vaginalis]
Length = 496
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 69/129 (53%), Gaps = 3/129 (2%)
Query: 203 VIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVP 262
I+ F+ M+I+GQ+N FII KY D++ IDQHA E NFE L+K I+SQ+L+ P
Sbjct: 364 AIETKAFKDMEIIGQWNQSFIITKYGCDIYTIDQHAAMEAQNFEKLRKKCSIQSQRLISP 423
Query: 263 QNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLF 322
+ T +D + G+++ D ++L+ +P G +D+ EL+
Sbjct: 424 IVISATPQEISAAEDCKQKCKEFGYDYDI---SDNSILVKKIPSITTVATGSDDLLELIT 480
Query: 323 MLQHTNSTE 331
ML + +++
Sbjct: 481 MLHESPASQ 489
>gi|380743078|gb|AFE18952.1| PMS1-like protein, partial [Trichomonas vaginalis]
Length = 496
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 69/129 (53%), Gaps = 3/129 (2%)
Query: 203 VIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVP 262
I+ F+ M+I+GQ+N FII KY D++ IDQHA E NFE L+K I+SQ+L+ P
Sbjct: 364 AIETKAFKDMEIIGQWNQSFIITKYGCDIYAIDQHAAMEAQNFEKLRKKCSIQSQRLISP 423
Query: 263 QNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLF 322
+ T +D + G+++ D ++L+ +P G +D+ EL+
Sbjct: 424 IVISATPQEISAAEDCKQKCKEFGYDYDI---SDNSILVKKIPSITTVATGSDDLLELIT 480
Query: 323 MLQHTNSTE 331
ML + +++
Sbjct: 481 MLHESPASQ 489
>gi|380743036|gb|AFE18931.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743126|gb|AFE18976.1| PMS1-like protein, partial [Trichomonas vaginalis]
Length = 496
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 69/129 (53%), Gaps = 3/129 (2%)
Query: 203 VIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVP 262
I+ F+ M+I+GQ+N FII KY D++ IDQHA E NFE L+K I+SQ+L+ P
Sbjct: 364 AIETKAFKDMEIIGQWNQSFIITKYGCDIYAIDQHAAMEAQNFEKLRKKCSIQSQRLISP 423
Query: 263 QNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLF 322
+ T +D + G+++ D ++L+ +P G +D+ EL+
Sbjct: 424 IVISATPQEISAAEDCKQKCKEFGYDYDI---SDNSILVKKIPSITTVATGSDDLLELIT 480
Query: 323 MLQHTNSTE 331
ML + +++
Sbjct: 481 MLHESPASQ 489
>gi|404371185|ref|ZP_10976493.1| DNA mismatch repair protein MutL [Clostridium sp. 7_2_43FAA]
gi|226912692|gb|EEH97893.1| DNA mismatch repair protein MutL [Clostridium sp. 7_2_43FAA]
Length = 684
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 171/392 (43%), Gaps = 40/392 (10%)
Query: 14 HQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATV--KVHITDSYAIGFTVDGNN 71
+++PF +L +E+ + VDVN+ P K +I ++ + V VH A V +
Sbjct: 279 NKFPFFVLFLEVYPEFVDVNIHPTKAEIKFKEDRGIFKKVFDAVH----KAFKSEVFNDF 334
Query: 72 MNQSMEQDPSSDVDMEKIQRS------NSEEVEHETIPVPS-EDNSNFSHEANLQQSPET 124
E++ +V E ++ N +P+ EDNSN + E + P
Sbjct: 335 YIPEEEKEHKDEVPTEVVEEISFNINLNDTYSNSNNLPLSYYEDNSNKNKENEINTMPGV 394
Query: 125 VEPDTPDETIEVIDDMPRLQ--GSYRQSTPVTLSLDIIQDQLKAR---YARRTVQAQDRC 179
D E E+ +++ L+ G T + + R Y TV +D+
Sbjct: 395 SYEDLKREE-ELYNNLKNLKELGKLDIKTHNNNNNIDDNNNFDYRPINYDSNTVVYEDKK 453
Query: 180 VENRFHANIDPS-KNKEAESE--------LNRVIKK-SMFEKMKIVGQFNLGFIIVKYDS 229
+ N D + K+ E +E LN + + + F ++I+GQFN +I+ +YD
Sbjct: 454 EISNNEVNTDIAIKSNEVNNENVVSNKENLNNIENRNAKFPNLRIIGQFNKTYILAEYDE 513
Query: 230 DLFIIDQHATDEKYNFETLQKTTL---IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNG 286
L++IDQHA EK FE K+ I Q+L+VP + LT + C ++N VF G
Sbjct: 514 VLYMIDQHAAHEKILFEKYLKSIEEGDIVVQQLLVPTLIDLTTDDFCYYEENSKVFTMAG 573
Query: 287 FEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLF-MLQHTNSTEHCRPSRIRA-MFAS 344
FS ++ + + +P LG+ D L +L + S + + ++ A+
Sbjct: 574 --FSIENFGGNTIAIKEVPY----FLGKLDPRNLFINILDNIKSLGSGKTTEVKYNRIAT 627
Query: 345 RACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
AC+ +V L+ EM L+ ++ ID P+
Sbjct: 628 LACKAAVKANDYLNQMEMEKLINDLRYIDDPF 659
>gi|315651394|ref|ZP_07904419.1| DNA mismatch repair protein MutL [Lachnoanaerobaculum saburreum DSM
3986]
gi|315486353|gb|EFU76710.1| DNA mismatch repair protein MutL [Lachnoanaerobaculum saburreum DSM
3986]
Length = 652
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 158/381 (41%), Gaps = 48/381 (12%)
Query: 14 HQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMN 73
HQYPF L E+ D VDVNV P K ++ + K + + + + +
Sbjct: 277 HQYPFCALKFEL--DGVDVNVHPRKMEVRFSDRNFVYDNTKEAVEEIFTAQSAIREVPIG 334
Query: 74 QSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPDET 133
+S + +KI S E E++ + E + F + + S + + P E
Sbjct: 335 KSSNE--------KKIFVSTPEPFENKRRDLTGEFQNTFKDKKTYKSSDDEINWTVPKEN 386
Query: 134 I-EVIDDMPRLQGSYRQSTPVTLS-LDIIQDQLKARYARRTVQAQDRCVENRFHA----- 186
+ DDM ++ S + ++ +I+ + + +V + F
Sbjct: 387 MYNPRDDMSLIKDEKSNSMYLDINDFNILNTDISDTKSDTSVSTDNAVCNKNFEVGNVSN 446
Query: 187 NIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFE 246
NI PS+ +SE + MK+VGQ + IV+ + +L+IIDQHA EK +E
Sbjct: 447 NIKPSQLSFFDSESKKY--------MKVVGQVFDTYWIVQLEKELYIIDQHAAHEKVMYE 498
Query: 247 TL---QKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNV---- 299
L K + SQ + P + LT I Q +LKD++ F K GF+ + +
Sbjct: 499 RLLKESKENRLSSQMINPPVIVTLTDIEQNVLKDHMDEFRKIGFDIEEFGGKEYKINSIP 558
Query: 300 -LLTSLPMSKNTTLGREDIEELLF--MLQHTNSTEHCRPSR-IRAMFASRACRKSVMIGR 355
+ S+P ++ LF ML + + + PS I A AS AC+ ++
Sbjct: 559 NIFPSIPKAE------------LFNEMLSDSTNYDIISPSELILAKVASMACKAAIKGNM 606
Query: 356 ALSVGEMTGLVRNMGRIDQPW 376
+S+ E L + +D P+
Sbjct: 607 RISLLEANELFDELLSLDNPY 627
>gi|303228550|ref|ZP_07315378.1| DNA mismatch repair protein, C-terminal domain protein [Veillonella
atypica ACS-134-V-Col7a]
gi|302516797|gb|EFL58711.1| DNA mismatch repair protein, C-terminal domain protein [Veillonella
atypica ACS-134-V-Col7a]
Length = 652
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 92/400 (23%), Positives = 170/400 (42%), Gaps = 58/400 (14%)
Query: 1 MKLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITD 59
+K ++ YH YP ++L+I + VD+NV P K ++ + +K++ V I +
Sbjct: 265 LKAIDNAYHALLPKSGYPLVLLHITVPASMVDINVHPRKSEVKFEDDKIIFKAVYHAILN 324
Query: 60 SYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANL- 118
+ N +++ E++ SS + + S ++ V S+ N H A
Sbjct: 325 AL-------NNPLHERYERESSSFTQPLETESQGSGYNSYQAPQVLSDHNDTAEHIATAI 377
Query: 119 ----------QQSPETVEPDTPDETIEVIDDM-------PRLQGSYRQSTPVTLSLDIIQ 161
+ E + DT D +D + P + +Y Q S +
Sbjct: 378 DYDKVFGGRRTKGYEVLRQDTRD----FVDALKEKGFTPPAPKATYEQEAFEESSFTSVP 433
Query: 162 DQLKARYARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLG 221
A + A+D+ +FH + + E E +R I+KS F M GQ
Sbjct: 434 T------AYTSYTAEDK---EKFHQ----IQEQHIEDE-SRDIQKSGFLPM---GQVASC 476
Query: 222 FIIVKYDSDLFIIDQHATDEKYNFETLQKTT-LIKSQKLVVPQNLHLTKINQCILKDNLP 280
+I+ K DL+IIDQHA E+ ++ L K++ I Q L+VP + T+ ++++
Sbjct: 477 YILAKKGDDLYIIDQHAAHERVRYDRLCKSSEAIPMQSLLVPTYSNATEDEMNLVENEQD 536
Query: 281 VFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIR- 339
GFE + + L P+ + +E I +F H +H +P++ +
Sbjct: 537 ALLDLGFEVELGGPN--QIKLVGAPVDLVESKAQE-ILSYVFTFLH----DHEQPTKAQL 589
Query: 340 --AMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPWV 377
M A +CR ++ G L++ +MT L+ ++ D+P+V
Sbjct: 590 RHEMLAYASCRGAIKSGHNLNMYQMTTLIEDLFHTDKPYV 629
>gi|380743070|gb|AFE18948.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743074|gb|AFE18950.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743082|gb|AFE18954.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743112|gb|AFE18969.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743162|gb|AFE18994.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743202|gb|AFE19014.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743212|gb|AFE19019.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743222|gb|AFE19024.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743232|gb|AFE19029.1| PMS1-like protein, partial [Trichomonas vaginalis]
Length = 496
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 71/134 (52%), Gaps = 13/134 (9%)
Query: 203 VIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVP 262
I+ F+ M+I+GQ+N FII KY D++ IDQHA E NFE L+K I+SQ+L+ P
Sbjct: 364 AIETKAFKDMEIIGQWNQSFIITKYGCDIYAIDQHAAMEAQNFEKLRKKCSIQSQRLISP 423
Query: 263 QNLHLT-----KINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDI 317
+ T +C K F + +D SD+ ++L+ +P G +D+
Sbjct: 424 IVISATPQEISAAEECKQK-------CKEFGYDYDISDN-SILVKKIPSITTVATGSDDL 475
Query: 318 EELLFMLQHTNSTE 331
EL+ ML + +++
Sbjct: 476 LELITMLHESPASQ 489
>gi|380743258|gb|AFE19042.1| PMS1-like protein, partial [Trichomonas vaginalis]
Length = 496
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 71/134 (52%), Gaps = 13/134 (9%)
Query: 203 VIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVP 262
I+ F+ M+I+GQ+N FII KY D++ IDQHA E NFE L+K I+SQ+L+ P
Sbjct: 364 AIETKAFKDMEIIGQWNQSFIITKYGCDIYAIDQHAAMEAQNFEKLRKKCSIQSQRLISP 423
Query: 263 QNLHLT-----KINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDI 317
+ T +C K F + +D SD+ ++L+ +P G +D+
Sbjct: 424 IVISATPQEISAAEECKQK-------CKEFGYDYDISDN-SILVKKIPSITTVATGSDDL 475
Query: 318 EELLFMLQHTNSTE 331
EL+ ML + +++
Sbjct: 476 LELITMLHESPASQ 489
>gi|400180300|gb|AFP73279.1| DNA mismatch repair protein, partial [Trichomonas vaginalis]
Length = 149
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 79/159 (49%), Gaps = 16/159 (10%)
Query: 224 IVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLT-----KINQCILKDN 278
I KY D++ IDQHA E NFE L+K I+SQ+L+ P + T +C K
Sbjct: 1 ITKYGCDIYAIDQHAAMEAQNFEKLRKKCSIQSQRLISPIVISATPQEISAAEECKQK-- 58
Query: 279 LPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTE-HCRPSR 337
F + +D SD+ ++ + +P G +D+ EL+ ML + +++ R +R
Sbjct: 59 -----CKEFGYDYDISDN-SIHVKKIPSITTVATGSDDLLELITMLHESPASQPMTRNAR 112
Query: 338 IRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
I A RAC SV +G ++ +M L+ M + D PW
Sbjct: 113 I--WMAYRACHSSVRVGDTMNHSQMKDLLNRMAQSDFPW 149
>gi|380743038|gb|AFE18932.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743048|gb|AFE18937.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743050|gb|AFE18938.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743072|gb|AFE18949.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743084|gb|AFE18955.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743092|gb|AFE18959.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743096|gb|AFE18961.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743102|gb|AFE18964.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743104|gb|AFE18965.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743108|gb|AFE18967.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743132|gb|AFE18979.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743146|gb|AFE18986.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743148|gb|AFE18987.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743154|gb|AFE18990.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743170|gb|AFE18998.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743180|gb|AFE19003.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743182|gb|AFE19004.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743192|gb|AFE19009.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743200|gb|AFE19013.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743210|gb|AFE19018.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743226|gb|AFE19026.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743228|gb|AFE19027.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743234|gb|AFE19030.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743246|gb|AFE19036.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743254|gb|AFE19040.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743262|gb|AFE19044.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743274|gb|AFE19050.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743302|gb|AFE19064.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743310|gb|AFE19068.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743312|gb|AFE19069.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743314|gb|AFE19070.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743316|gb|AFE19071.1| PMS1-like protein, partial [Trichomonas vaginalis]
Length = 496
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 71/134 (52%), Gaps = 13/134 (9%)
Query: 203 VIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVP 262
I+ F+ M+I+GQ+N FII KY D++ IDQHA E NFE L+K I+SQ+L+ P
Sbjct: 364 AIETKAFKDMEIIGQWNQSFIITKYGCDIYAIDQHAAMEAQNFEKLRKKCSIQSQRLISP 423
Query: 263 QNLHLT-----KINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDI 317
+ T +C K F + +D SD+ ++L+ +P G +D+
Sbjct: 424 IVISATPQEISAAEECKQK-------CKEFGYDYDISDN-SILVKKIPSITTVATGSDDL 475
Query: 318 EELLFMLQHTNSTE 331
EL+ ML + +++
Sbjct: 476 LELITMLHESPASQ 489
>gi|380743272|gb|AFE19049.1| PMS1-like protein, partial [Trichomonas vaginalis]
Length = 496
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 71/134 (52%), Gaps = 13/134 (9%)
Query: 203 VIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVP 262
I+ F+ M+I+GQ+N FII KY D++ IDQHA E NFE L+K I+SQ+L+ P
Sbjct: 364 AIETKAFKDMEIIGQWNQSFIITKYGCDIYAIDQHAAMEAQNFEKLRKKCSIQSQRLISP 423
Query: 263 QNLHLT-----KINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDI 317
+ T +C K F + +D SD+ ++L+ +P G +D+
Sbjct: 424 IVISATPQEISAAEECKQK-------CKEFGYDYDISDN-SILVKKIPSITTVATGSDDL 475
Query: 318 EELLFMLQHTNSTE 331
EL+ ML + +++
Sbjct: 476 LELITMLHESPASQ 489
>gi|380743076|gb|AFE18951.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743088|gb|AFE18957.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743150|gb|AFE18988.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743186|gb|AFE19006.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743190|gb|AFE19008.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743224|gb|AFE19025.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743304|gb|AFE19065.1| PMS1-like protein, partial [Trichomonas vaginalis]
Length = 496
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 71/134 (52%), Gaps = 13/134 (9%)
Query: 203 VIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVP 262
I+ F+ M+I+GQ+N FII KY D++ IDQHA E NFE L+K I+SQ+L+ P
Sbjct: 364 AIETKAFKDMEIIGQWNQSFIITKYGCDIYAIDQHAAMEAQNFEKLRKKCSIQSQRLISP 423
Query: 263 QNLHLT-----KINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDI 317
+ T +C K F + +D SD+ ++L+ +P G +D+
Sbjct: 424 IVISATPQEISAAEECKQK-------CKEFGYDYDISDN-SILVKKIPSITTVATGSDDL 475
Query: 318 EELLFMLQHTNSTE 331
EL+ ML + +++
Sbjct: 476 LELITMLHESPASQ 489
>gi|380743058|gb|AFE18942.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743086|gb|AFE18956.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743152|gb|AFE18989.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743242|gb|AFE19034.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743296|gb|AFE19061.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743306|gb|AFE19066.1| PMS1-like protein, partial [Trichomonas vaginalis]
Length = 496
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 71/134 (52%), Gaps = 13/134 (9%)
Query: 203 VIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVP 262
I+ F+ M+I+GQ+N FII KY D++ IDQHA E NFE L+K I+SQ+L+ P
Sbjct: 364 AIETKAFKDMEIIGQWNQSFIITKYGCDIYAIDQHAAMEAQNFEKLRKKCSIQSQRLISP 423
Query: 263 QNLHLT-----KINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDI 317
+ T +C K F + +D SD+ ++L+ +P G +D+
Sbjct: 424 IVISATPQEISAAEECKQK-------CKEFGYDYDISDN-SILVKKIPSITTVATGSDDL 475
Query: 318 EELLFMLQHTNSTE 331
EL+ ML + +++
Sbjct: 476 LELITMLHESPASQ 489
>gi|380743044|gb|AFE18935.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743052|gb|AFE18939.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743054|gb|AFE18940.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743064|gb|AFE18945.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743116|gb|AFE18971.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743136|gb|AFE18981.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743166|gb|AFE18996.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743216|gb|AFE19021.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743230|gb|AFE19028.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743236|gb|AFE19031.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743244|gb|AFE19035.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743276|gb|AFE19051.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743286|gb|AFE19056.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743308|gb|AFE19067.1| PMS1-like protein, partial [Trichomonas vaginalis]
Length = 496
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 71/134 (52%), Gaps = 13/134 (9%)
Query: 203 VIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVP 262
I+ F+ M+I+GQ+N FII KY D++ IDQHA E NFE L+K I+SQ+L+ P
Sbjct: 364 AIETKAFKDMEIIGQWNQSFIITKYGCDIYAIDQHAAMEAQNFEKLRKKCSIQSQRLISP 423
Query: 263 QNLHLT-----KINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDI 317
+ T +C K F + +D SD+ ++L+ +P G +D+
Sbjct: 424 IVISATPQEISAAEECKQK-------CKEFGYDYDISDN-SILVKKIPSITTVATGSDDL 475
Query: 318 EELLFMLQHTNSTE 331
EL+ ML + +++
Sbjct: 476 LELITMLHESPASQ 489
>gi|380743118|gb|AFE18972.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743268|gb|AFE19047.1| PMS1-like protein, partial [Trichomonas vaginalis]
Length = 496
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 71/134 (52%), Gaps = 13/134 (9%)
Query: 203 VIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVP 262
I+ F+ M+I+GQ+N FII KY D++ IDQHA E NFE L+K I+SQ+L+ P
Sbjct: 364 AIETKAFKDMEIIGQWNQSFIITKYGCDIYAIDQHAAMEAQNFEKLRKKCSIQSQRLISP 423
Query: 263 QNLHLT-----KINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDI 317
+ T +C K F + +D SD+ ++L+ +P G +D+
Sbjct: 424 IVISATPQEISAAEECKQK-------CKEFGYDYDISDN-SILVKKIPSITTVATGSDDL 475
Query: 318 EELLFMLQHTNSTE 331
EL+ ML + +++
Sbjct: 476 LELITMLHESPASQ 489
>gi|380743040|gb|AFE18933.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743284|gb|AFE19055.1| PMS1-like protein, partial [Trichomonas vaginalis]
Length = 496
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 71/134 (52%), Gaps = 13/134 (9%)
Query: 203 VIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVP 262
I+ F+ M+I+GQ+N FII KY D++ IDQHA E NFE L+K I+SQ+L+ P
Sbjct: 364 AIETKAFKDMEIIGQWNQSFIITKYGCDIYAIDQHAAMEAQNFEKLRKKCSIQSQRLISP 423
Query: 263 QNLHLT-----KINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDI 317
+ T +C K F + +D SD+ ++L+ +P G +D+
Sbjct: 424 IVISATPQEISAAEECKQK-------CKEFGYDYDISDN-SILVKKIPSITTVATGSDDL 475
Query: 318 EELLFMLQHTNSTE 331
EL+ ML + +++
Sbjct: 476 LELITMLHESPASQ 489
>gi|406909227|gb|EKD49523.1| hypothetical protein ACD_63C00115G0010, partial [uncultured
bacterium]
Length = 238
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 87/172 (50%), Gaps = 7/172 (4%)
Query: 198 SELNRVIKKSMFEKMK--IVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQ-KTTLI 254
S L R FEK K I+GQ +I+V+ + L IIDQHA E+ +E L+ + +
Sbjct: 39 SRLRRNAADDFFEKEKSPIIGQVRDSYILVEEKNCLKIIDQHAAHERVLYEKLKNEKERV 98
Query: 255 KSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGR 314
K QKL+VP + LT +LKDNL GF+ DS N ++ S+
Sbjct: 99 KKQKLLVPVKIELTLKESEVLKDNLKTLDDLGFDIKKDSK---NFIINSVAAGLEKIEIN 155
Query: 315 EDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLV 366
+ I+E++ L +++ + + +R + AS ACR +VM G L EM LV
Sbjct: 156 KFIKEIIDDLLNSDRIKKIKDAR-EKLIASMACRGAVMAGDKLEPSEMEELV 206
>gi|260438406|ref|ZP_05792222.1| DNA mismatch repair protein HexB [Butyrivibrio crossotus DSM 2876]
gi|292808992|gb|EFF68197.1| DNA mismatch repair protein HexB [Butyrivibrio crossotus DSM 2876]
Length = 627
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 170/372 (45%), Gaps = 56/372 (15%)
Query: 14 HQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMN 73
H+YPF L+I ++ + +DVNV P K ++ +E+ + VK +S + T
Sbjct: 278 HKYPFTSLHITINPELLDVNVHPSKMELRFSNEQEIYNNVK----ESILLALT------- 326
Query: 74 QSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPDET 133
++ ++++EK ++ +VE+ E ++ ++E +++ PETV P
Sbjct: 327 ---HRELIPEINLEKAKKEEPLKVEYNK----KEPDTVVNYEKAVEKQPETVNEKEP--- 376
Query: 134 IEVIDDMPRLQG---SYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANIDP 190
++ +P ++ S R P ++ +++ + ++ Q+ +P
Sbjct: 377 -VIVRKVPEVKKPLVSARMPEPFETKRAVVYEEV-----VKEIKQQE-----------EP 419
Query: 191 SKNKEAE-SELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQ 249
K+ E ++N ++KK + +KI+GQ + I+++++ ++I+DQHA EK FE
Sbjct: 420 ---KQLELFKVNELLKKENKKDIKIIGQLFDTYWIMEFENSMYIVDQHAAHEKVLFERFM 476
Query: 250 KT---TLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPM 306
K I SQ + P LT Q + KDN + G+E + G + + +P
Sbjct: 477 KRYNDRSITSQMINPPVVFSLTTEEQNVYKDNEEYLAQFGYE--IEDFGGGELAIRGIPA 534
Query: 307 SKNTTLGREDIEELL--FMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTG 364
+ +E E++ + + +T P I+ A+ +C+ +V L++ EM
Sbjct: 535 DFSEADPKEIFTEIMDSLCIDYGKNT----PETIKNRIATMSCKAAVKGNNRLNIKEMEK 590
Query: 365 LVRNMGRIDQPW 376
L+ + ++ P+
Sbjct: 591 LMDELMELENPY 602
>gi|380743042|gb|AFE18934.1| PMS1-like protein, partial [Trichomonas vaginalis]
Length = 496
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 71/134 (52%), Gaps = 13/134 (9%)
Query: 203 VIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVP 262
I+ F+ M+I+GQ+N FII KY D++ IDQHA E NFE L+K I+SQ+L+ P
Sbjct: 364 AIETKAFKDMEIIGQWNQSFIITKYGCDIYAIDQHAAMEAQNFEKLRKKCSIQSQRLISP 423
Query: 263 QNLHLT-----KINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDI 317
+ T +C K F + +D SD+ ++L+ +P G +D+
Sbjct: 424 IVISATPQEISAPEECKQK-------CKEFGYDYDISDN-SILVKKIPSITTVATGSDDL 475
Query: 318 EELLFMLQHTNSTE 331
EL+ ML + +++
Sbjct: 476 LELITMLHESPASQ 489
>gi|294462532|gb|ADE76812.1| unknown [Picea sitchensis]
Length = 150
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 67/128 (52%), Gaps = 29/128 (22%)
Query: 278 NLPVFYKNGFEFSFDSSDDGN--VLLTSLPMSKNTTLGREDIEELLFMLQHT-------- 327
+L F KNGF+F D++ LL+++P S+N T G ED++ELL +L
Sbjct: 2 HLDTFRKNGFDFVEDTNAPPGRRFLLSAVPYSQNITFGLEDVQELLSILADAPAPPTSEV 61
Query: 328 ----NSTEHCR---------------PSRIRAMFASRACRKSVMIGRALSVGEMTGLVRN 368
+ ++ C PSR+RAM ASRACR SVMIG AL +M ++++
Sbjct: 62 SDSLDCSDVCSNSYKKAIPQSISALCPSRVRAMLASRACRSSVMIGDALCKKDMETILQH 121
Query: 369 MGRIDQPW 376
+ ++ PW
Sbjct: 122 LSTLNSPW 129
>gi|15895111|ref|NP_348460.1| DNA mismatch repair protein [Clostridium acetobutylicum ATCC 824]
gi|337737053|ref|YP_004636500.1| DNA mismatch repair protein [Clostridium acetobutylicum DSM 1731]
gi|384458561|ref|YP_005670981.1| DNA mismatch repair protein [Clostridium acetobutylicum EA 2018]
gi|20455120|sp|Q97I20.1|MUTL_CLOAB RecName: Full=DNA mismatch repair protein MutL
gi|15024811|gb|AAK79800.1|AE007692_8 DNA mismatch repair enzyme, MutL [Clostridium acetobutylicum ATCC
824]
gi|325509250|gb|ADZ20886.1| DNA mismatch repair protein [Clostridium acetobutylicum EA 2018]
gi|336292017|gb|AEI33151.1| DNA mismatch repair protein [Clostridium acetobutylicum DSM 1731]
Length = 622
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 162/370 (43%), Gaps = 57/370 (15%)
Query: 14 HQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHE----KLLLATVKVHITDSYAIGFTVDG 69
+++PF I+ +++ + VDVNV P K ++ +E K++ TV I +S F V+
Sbjct: 278 NKFPFFIIFLDIFPEFVDVNVHPTKSEVKFQNERDIFKIIFDTVHEGIRNSLKESFKVEA 337
Query: 70 NNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDT 129
E+D D+ + I ++ E++H+ D
Sbjct: 338 ----LKEEEDKLFDIKEDVITKN---EIKHD---------------------------DK 363
Query: 130 PDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANID 189
D I+ + S PV + + I + Y T + +DR ++ +I
Sbjct: 364 IDGYIK------------KDSFPVPVQIPIDLKRPIENYDNSTKENKDRSFDDFREKDII 411
Query: 190 PSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQ 249
++E E+ KK+ F +++++GQFN +I+ + +L+IIDQHA EK FE +
Sbjct: 412 KETSQEKETYDIITNKKAKFPELRVIGQFNNTYILAESFEELYIIDQHAAHEKILFEKYR 471
Query: 250 ---KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPM 306
K + SQ L+ P + L + +N VF GF + D V + +P+
Sbjct: 472 EDIKNKGVSSQILITPSVVELLPEDFIYYDENKEVFKNAGFVIEY--FGDNTVAIKEVPL 529
Query: 307 SKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLV 366
L ++ E++ L++ S E + R++ A+ AC+ +V L+ EM L+
Sbjct: 530 FLGKPLVKDLFLEIIDNLKNMGSGE-TSEVKYRSI-ATAACKSAVKAYHELTHDEMKTLI 587
Query: 367 RNMGRIDQPW 376
+++ + P+
Sbjct: 588 QDLRFAEDPF 597
>gi|429759391|ref|ZP_19291890.1| DNA mismatch repair protein [Veillonella atypica KON]
gi|429179667|gb|EKY20906.1| DNA mismatch repair protein [Veillonella atypica KON]
Length = 652
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 91/409 (22%), Positives = 169/409 (41%), Gaps = 76/409 (18%)
Query: 1 MKLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITD 59
+K ++ YH YP ++L+I + VD+NV P K ++ + +K++ V I +
Sbjct: 265 LKAIDNAYHALLPKSGYPLVLLHITVPASMVDINVHPRKSEVKFEDDKIIFKAVYHAILN 324
Query: 60 SYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANL- 118
+ N +++ E++ SS + + S ++ V S+ N H A
Sbjct: 325 AL-------NNPLHERYERESSSFTQPLETESQGSGYNSYQAPQVLSDHNDTAEHIATAI 377
Query: 119 ----------QQSPETVEPDTPDETIEVIDDM-------PRLQGSYRQ---------STP 152
+ E + DT D +D + P + +Y Q S P
Sbjct: 378 DYDKVFGGRRTKGYEVLRQDTRD----FVDALKEKGFTPPAPKATYEQEAFEESSFTSVP 433
Query: 153 VTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKM 212
+ +D+ K Q Q++ +E+ +R I+KS F M
Sbjct: 434 TAYTSYTTEDKEKFH------QIQEQHIEDE-----------------SRDIQKSGFLPM 470
Query: 213 KIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTT-LIKSQKLVVPQNLHLTKIN 271
GQ +I+ K DL+IIDQHA E+ ++ L K++ I Q L+VP + T+
Sbjct: 471 ---GQVASCYILAKKGDDLYIIDQHAAHERVRYDRLCKSSEAIPMQSLLVPTYSNATEDE 527
Query: 272 QCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTE 331
++++ GFE + + L P+ + +E I +F H +
Sbjct: 528 MNLVENEQDALLDLGFEVELGGPN--QIKLVGAPVDLVESKAQE-ILSYVFTFLH----D 580
Query: 332 HCRPSRIR---AMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPWV 377
H +P++ + M A +CR ++ G L++ +MT L+ ++ D+P+V
Sbjct: 581 HEQPTKAQLRHEMLAYASCRGAIKSGHNLNMYQMTTLIEDLFHTDKPYV 629
>gi|187932933|ref|YP_001886011.1| DNA mismatch repair protein [Clostridium botulinum B str. Eklund
17B]
gi|238691603|sp|B2TIB8.1|MUTL_CLOBB RecName: Full=DNA mismatch repair protein MutL
gi|187721086|gb|ACD22307.1| DNA mismatch repair protein MutL [Clostridium botulinum B str.
Eklund 17B]
Length = 672
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/392 (21%), Positives = 182/392 (46%), Gaps = 31/392 (7%)
Query: 4 VNEVYHQFNN-HQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLL--------ATVK 54
V + + F+ ++PF IL IE+ + +DVN+ P K ++ + E+ + ++K
Sbjct: 268 VEQAFKSFSTVSKFPFFILFIEIYPEYIDVNIHPTKSEVKFNDERFIFKKIFGAVHTSLK 327
Query: 55 VHITDSYAIGFTVD---GNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSN 111
+ +++I V+ N N ++E+ + ++ + N+ + + I +NS
Sbjct: 328 EEVFSTFSIPEEVNEAISKNTNLNIEEITFKIEEEQEKVKFNTNHLSQKNICSTQGNNSI 387
Query: 112 FSHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARR 171
H + + +T P + +++ D +L+ S P + ++I D + +Y
Sbjct: 388 NKHIYDEKHKTDTNIPLNVNIPVDLKSDHIKLEDD-NNSIP---NKEVICDNNEVKYESS 443
Query: 172 TVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSM--FEKMKIVGQFNLGFIIVKYDS 229
++ EN +++D ++K + + ++K+ + F +KI+GQ+N +I+ +Y
Sbjct: 444 YTSDSNQ-YENSCKSDVD-KESKSKTTGTSELVKEKIPKFPAIKIIGQYNKTYILGEYAG 501
Query: 230 DLFIIDQHATDEKYNFETLQKTTL---IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNG 286
L++IDQHA EK FE + I Q L++P + L+ + ++N VF + G
Sbjct: 502 TLYMIDQHAAHEKIMFEKYLNDIICGDIIIQPLMIPTVIDLSMDDYSYFEENKDVFKEAG 561
Query: 287 FEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLF-MLQHTNSTEHCRPSRIRA-MFAS 344
F+ + ++ L +P LG+ + L +L + + + + ++ A+
Sbjct: 562 --FTIEDFGGTSIALKEVPY----FLGKLKPKNLFLEILDNLKNLGSGKTTEVKYNAIAT 615
Query: 345 RACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+AC+ +V +L EM L+ + ID P+
Sbjct: 616 KACKSAVKGNDSLDELEMVKLIEELRYIDDPF 647
>gi|150017423|ref|YP_001309677.1| DNA mismatch repair protein [Clostridium beijerinckii NCIMB 8052]
gi|189030395|sp|A6LWJ1.1|MUTL_CLOB8 RecName: Full=DNA mismatch repair protein MutL
gi|149903888|gb|ABR34721.1| DNA mismatch repair protein MutL [Clostridium beijerinckii NCIMB
8052]
Length = 664
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 93/396 (23%), Positives = 180/396 (45%), Gaps = 47/396 (11%)
Query: 4 VNEVYHQFNN-HQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLL--------ATVK 54
V + + F+ +++PF IL IE+ + VDVN+ P K +I + E+++ +K
Sbjct: 268 VEQAFKSFSTVNKFPFFILFIEVYPEYVDVNIHPTKAEIKFNDERMIFKKIFGAVHTALK 327
Query: 55 VHITDSYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSH 114
+ +++AI N E P+ E+I EE E S + S
Sbjct: 328 NEVFETFAIK-----EEENTKKEPLPT----FEEITFKIKEEEEKVKF-ASSAAKTLISQ 377
Query: 115 EANLQQSPETVEPDTPDETIEVIDDMPRLQGS-YRQST--PVTLSLDIIQDQLKARYARR 171
+L+ + E+ D ++ I+ + + Y + P+++ +D+ + Y
Sbjct: 378 GKDLKANNESSFKSVYDPSLNNINKTIVEESTDYNKENEEPISIPVDLKPNS----YIEN 433
Query: 172 TVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSM--FEKMKIVGQFNLGFIIVKYDS 229
V E+ +N +P +N E++ + + F + I+GQ+N +I+ +YD
Sbjct: 434 LVDDYSDNAEDEIKSNSEPIENVITENKYENIKPNPIAKFPPITIIGQYNKTYILGEYDG 493
Query: 230 DLFIIDQHATDEKYNFET----LQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKN 285
L++IDQHA EK FE +++ T+I Q L+VP + L+ + ++N +F +
Sbjct: 494 TLYMIDQHAAHEKILFEKYLKEIEEGTII-IQPLIVPSIIDLSIDDYSYFEENKDIFREA 552
Query: 286 GF---EFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLF-MLQHTNSTEHCRPSRIR-A 340
GF EF S + L +P LGR + + L +L + + + + S ++
Sbjct: 553 GFLLEEFGGSS-----LSLKEVPY----FLGRLNPKNLFLDILDNLKNLGNGKTSEVKHN 603
Query: 341 MFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
A++AC+ ++ L + EM L+ ++ ID P+
Sbjct: 604 AIATKACKAAIKGNDKLEMNEMIKLIEDLRYIDDPF 639
>gi|153853166|ref|ZP_01994575.1| hypothetical protein DORLON_00560 [Dorea longicatena DSM 13814]
gi|149753952|gb|EDM63883.1| DNA mismatch repair domain protein [Dorea longicatena DSM 13814]
Length = 701
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 109/443 (24%), Positives = 177/443 (39%), Gaps = 100/443 (22%)
Query: 2 KLVNEVYHQFN-NHQYPFIILNIEMSRDSVDVNVTPDKRQIFMD---------------- 44
+ + + Y F H+YPF++L+IE+ + VDVNV P K ++ +
Sbjct: 266 RAIEDAYKDFTMQHKYPFVVLHIEIDGEHVDVNVHPTKMELRFNNQQEVYNAIYSAVDQG 325
Query: 45 -HEKLLLATVK-------VHITDSYA----------------IGFT--VDGNNMNQSMEQ 78
HEK L+ V+ V T +YA G T + G + SM Q
Sbjct: 326 LHEKELIPHVEMPEPKPVVSNTPAYAPKPKTGSVSQTPAAVQTGATSGMTGGVTSASMPQ 385
Query: 79 ------DPSSDVDMEKIQRSNSEEV--EHE--------TIPVPSEDNSNFSHEANLQQSP 122
P + D+E E V EHE N + ++++SP
Sbjct: 386 RKKAIVPPPQERDLEYFMSRMKERVLAEHEEKKRREKIATKQAVHTTENIAENISVKESP 445
Query: 123 ETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVEN 182
TP E + +P +Q + +S +T+S + T + + E
Sbjct: 446 SFSSASTPSNVAE--EKIPYMQNASSKSK-ITMSTN----------TDETTKPEPSLTET 492
Query: 183 RFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEK 242
K+ E + ++ + +K K+VGQ + +V+YD+ L+IIDQHA E+
Sbjct: 493 ----------PKQMELFEDHLLTREAMQKYKVVGQVFETYWLVEYDNSLYIIDQHAAHER 542
Query: 243 YNFE-TLQ--KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGF---EFSFDSSDD 296
+E TL+ KT SQ + P L+L+ +L + F + GF EF DS
Sbjct: 543 VLYEKTLKSMKTREFTSQMISPPIVLNLSMQEAELLNTYMDQFTRIGFEIEEFGQDSYAV 602
Query: 297 GNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCR---PSRIRAMFASRACRKSVMI 353
V ++K +ELL + + S E R P I AS +C+ +V
Sbjct: 603 RAVPDNLFSIAK---------KELLIQMLDSLSDEITRNQSPDLIDEKIASMSCKAAVKG 653
Query: 354 GRALSVGEMTGLVRNMGRIDQPW 376
LSV E+ L+ + +D P+
Sbjct: 654 NMKLSVQEVDALIGELLSLDNPY 676
>gi|335436442|ref|ZP_08559237.1| DNA mismatch repair protein MutL [Halorhabdus tiamatea SARL4B]
gi|334897754|gb|EGM35883.1| DNA mismatch repair protein MutL [Halorhabdus tiamatea SARL4B]
Length = 711
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 96/424 (22%), Positives = 169/424 (39%), Gaps = 65/424 (15%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQI-FMDHEKLL----LATVKVH 56
+V +Q +YPF +L++ + +VDVNV P K ++ F D E L A +
Sbjct: 272 AIVEAYGNQLAPDRYPFAVLDLSLPAGTVDVNVHPRKMEVRFADEEGLREQVRAAVEETL 331
Query: 57 ITDSYAIGFTVDGNNMNQSMEQDP--------SSDVDMEKIQRSNSEE---VEHETIPVP 105
+T+ G + + E +P + D + RS++E E P
Sbjct: 332 LTEGLIRSSAPRGRSAPEQTEIEPDASTNGRTAESTDTDPGSRSDAESETPSEGTATGRP 391
Query: 106 SEDNSNFS---------HEANLQQSPETVEPDTPDE------TIEVIDDMPRLQGSYRQS 150
+E S+ S EA + S T+ PD+ T DD+ + R++
Sbjct: 392 AESVSDRSTERRSEPGDAEATVGASEGTLSTSNPDDSGGDPRTGAGTDDVT----TARET 447
Query: 151 TPVT-LSLDIIQDQLK-ARY------------ARRTVQAQDRCVENRFHANIDPSKNKEA 196
P T + + D+ + AR T +D V+ R ++ P +E
Sbjct: 448 DPSTGVGASVPADRDRDARANAGSDGEQTSWDGTATTSVRDSGVQARLGSDDGP---REG 504
Query: 197 ESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQK--TTLI 254
E E M+I+GQ + +++ + D+ L +IDQHA DE+ N+E L+
Sbjct: 505 EFE--------SLPSMRILGQLHDTYVVAETDTGLVLIDQHAADERINYERLKDAFAGET 556
Query: 255 KSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGR 314
+Q L P L LT + D + G FS + DD V +T++P T
Sbjct: 557 TTQVLAEPVELDLTARESALFADFEETLARLG--FSAERIDDRTVGVTAVPSLVAETADP 614
Query: 315 EDIEELLFMLQHTNSTEHCR-PSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRID 373
+ + ++L +++ + + A AC S+ +L+ G GL+ + +
Sbjct: 615 DLLRDVLSSFVDSDADPAATVEAAADDVLADLACYPSITGNTSLTEGSTVGLLEKLDECE 674
Query: 374 QPWV 377
P+
Sbjct: 675 NPYA 678
>gi|58584653|ref|YP_198226.1| DNA mismatch repair protein [Wolbachia endosymbiont strain TRS of
Brugia malayi]
gi|81311642|sp|Q5GSP0.1|MUTL_WOLTR RecName: Full=DNA mismatch repair protein MutL
gi|58418969|gb|AAW70984.1| DNA mismatch repair enzyme MutL, predicted ATPase [Wolbachia
endosymbiont strain TRS of Brugia malayi]
Length = 628
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 167/384 (43%), Gaps = 76/384 (19%)
Query: 7 VYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGF 65
YH F +++YPF L++E+ D +DVNV P+K ++ +++L+ V+ + + +
Sbjct: 269 AYHDFIPSNRYPFATLHLEIPYDQIDVNVHPNKSEVRFQNKRLIYEIVRRGLIKALS--- 325
Query: 66 TVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVP---SEDNSNFSHEANLQQSP 122
T GN+ + I RS + + ET +P SE N +H N
Sbjct: 326 TRTGNSA-------------VSNIDRSRCQGIGKETSGLPFDVSESQGNDNHINN----G 368
Query: 123 ETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQD---RC 179
++ E + E E R+ P +++L +V +D R
Sbjct: 369 KSRETKSERELYE------------RRPNP-------FENRLMKESNSPSVGKKDLSERS 409
Query: 180 VENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGF---------IIVKYDSD 230
V F + I S ++ L R E++ ++ LGF II +
Sbjct: 410 V--LFDSGIQKSLSQAKTVVLER-------EQIDLIENHPLGFARCQVYNTYIIAEARGK 460
Query: 231 LFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFS 290
L I+DQHA E+ +E L++ + IK QKL++ + + + NQ + + + V+ FE
Sbjct: 461 LIIVDQHAAHERLVYECLKQKSSIKRQKLLLSEVVEIK--NQAGM-EMVEVYKDKLFEMG 517
Query: 291 FD--SSDDGNVLLTSLPMSKNTTLGREDIEELLF-MLQHTNSTEHCRP--SRIRAMFASR 345
FD + + V++ +P LG D++E+L ++ E P ++ + A+
Sbjct: 518 FDIQINSENKVIVKEIP----AILGTIDVKEMLIDIVDRLMEIEDMLPIEDKVNKILATI 573
Query: 346 ACRKSVMIGRALSVGEMTGLVRNM 369
AC S+ GR + + EM L+R M
Sbjct: 574 ACHGSIRAGRTMKLEEMNVLLRQM 597
>gi|167630633|ref|YP_001681132.1| DNA mismatch repair protein mutl [Heliobacterium modesticaldum
Ice1]
gi|238687867|sp|B0TB10.1|MUTL_HELMI RecName: Full=DNA mismatch repair protein MutL
gi|167593373|gb|ABZ85121.1| DNA mismatch repair protein mutl [Heliobacterium modesticaldum
Ice1]
Length = 660
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 92/407 (22%), Positives = 172/407 (42%), Gaps = 79/407 (19%)
Query: 4 VNEVYH-QFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEK--------LLLATVK 54
V E YH ++PF +L++E+ ++DVN P K++I D E+ +L T++
Sbjct: 269 VEEAYHGMLPGGRFPFFVLHLELPPQTIDVNSHPTKQEIKFDRERDVADFTRQTVLQTLR 328
Query: 55 VHITDS--YAIG-FTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSN 111
+++ F DG Q + SSDV +++ E + I + E +
Sbjct: 329 SRPLSRPLWSLASFQSDGAPPTQQL----SSDVR----EKAEGERWRQDRILLYREGALS 380
Query: 112 FSHEANLQQSPETVEPDTPDETIEVID--DMPRLQGSYRQSTPVTLSLDIIQDQLKARYA 169
+ + L +SPE E +E ++ D + + YR+S+ L D +++ L+
Sbjct: 381 PTKQ-ELPKSPER------SERVERLNSGDFGQGRALYRESSQ-ELPTDCLRESLE---- 428
Query: 170 RRTVQAQDRCVENRFHANI-----DPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFII 224
++Q + N+ +P KE + + ++ + E + I GQF +I+
Sbjct: 429 --ETESQSESIRQCLSENLPLHRQEPRAEKECQP-VEGLVAGDVAEWIPI-GQFRRSYIL 484
Query: 225 VKYDSDLFIIDQHATDEKYNFETLQKTTL-----IKSQKLVVPQNLHLTKINQCILKDNL 279
+ L+++DQHA E+ + L++ L SQ+L++P + LT
Sbjct: 485 AEGGDTLYLVDQHAAHERVLYHGLKERYLNEAGVCASQQLLLPVTVTLT----------- 533
Query: 280 PVFYKNGFEFSFDSSD--------DGNVLL-----TSLPMSKNTTLGREDIEELLFMLQH 326
P ++ E + D GN LL LP + R+ + L+ L+
Sbjct: 534 PAEFQGAMEAIAELRDAGLIVEHFGGNTLLIRAVPVGLPPGEEKGFFRDILNSLMKGLRD 593
Query: 327 TNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRID 373
RA +S ACR +V G+ +S EM L++ + R++
Sbjct: 594 REVIR-------RAALSSMACRGAVKAGQVMSHAEMGALLQQLARLE 633
>gi|422325708|ref|ZP_16406736.1| DNA mismatch repair protein MutL [Erysipelotrichaceae bacterium
6_1_45]
gi|371667456|gb|EHO32581.1| DNA mismatch repair protein MutL [Erysipelotrichaceae bacterium
6_1_45]
Length = 695
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 91/408 (22%), Positives = 178/408 (43%), Gaps = 60/408 (14%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEK----LLLATVK-----------VHITD 59
+YP +++++ M VDVNV P K +I + EK LL T++ V+IT
Sbjct: 278 RYPIVVIDLLMDAQLVDVNVHPSKWEIRLSKEKQLEKLLYETIRKALQEQLEVPRVNITK 337
Query: 60 SYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSH--EAN 117
+ V+ + + E+D S E++ N + E PS D EA+
Sbjct: 338 E-TVKEKVEEQELQFTYERDDSISRLHEEV---NDSFIHPEKNEKPSLDMEELRRKIEAD 393
Query: 118 LQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARY--------- 168
+ E+ P P +T E++ ++ SY ++ + + +K ++
Sbjct: 394 KNRRKESAAPIQP-KTKEILPEIREETASYESEDSTSVKAETEEADVKVQHEDTDKTEVL 452
Query: 169 --ARRTVQAQDRCVENRFHAN-------IDPSKN----KEAESELNRVIKKSMFEKMKIV 215
A +A +E ++ I S+ K+AE+E + + S+ +++++
Sbjct: 453 PAADTGSEAHTEAIETDISSDAAVAYKEISQSEELVYEKKAEAEQPQPLNPSL-PQLRVI 511
Query: 216 GQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIK---SQKLVVPQNLHLTKINQ 272
GQF+ +I+ + + L+IIDQHA E+Y++E ++K L +Q L++P + T I+
Sbjct: 512 GQFHSCYILAEGEKGLYIIDQHAAQERYHYEIIRKQILDGNNDTQPLLLPITIEST-ISA 570
Query: 273 CILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEH 332
D+L + + D + LP L +D+EE F+ + E
Sbjct: 571 VSQADDLNALLEQ-LGIHLEVFGDHTFVCRQLP------LWMKDVEEEAFLCDMIDIWEK 623
Query: 333 CRPSRI----RAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+ + + A+ AC S+ R+L++ EM ++ ++ +QP+
Sbjct: 624 DKEISLDKLRKHAIATMACHSSIRFNRSLTLDEMKRVIEDLAHCEQPF 671
>gi|153933845|ref|YP_001384056.1| DNA mismatch repair protein [Clostridium botulinum A str. ATCC
19397]
gi|153936560|ref|YP_001387597.1| DNA mismatch repair protein [Clostridium botulinum A str. Hall]
gi|166232084|sp|A7FUK9.1|MUTL_CLOB1 RecName: Full=DNA mismatch repair protein MutL
gi|152929889|gb|ABS35389.1| DNA mismatch repair protein MutL [Clostridium botulinum A str. ATCC
19397]
gi|152932474|gb|ABS37973.1| DNA mismatch repair protein MutL [Clostridium botulinum A str.
Hall]
Length = 666
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 185/398 (46%), Gaps = 70/398 (17%)
Query: 14 HQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATV--KVH--ITDSYAIGFTVDG 69
+ YPF ++ I++ + +DVNV P K ++ E+ + T+ VH I FT
Sbjct: 279 NSYPFFVIFIDIFPEYIDVNVHPTKSEVKFKDERAMFKTIFDAVHEAIKGELKESFT--- 335
Query: 70 NNMNQSMEQDPSSDVDMEKIQRSNSE--EVEHETIPVPSEDNSN-----FSHEANLQQSP 122
N N+ D+++ ++S +E ++E E + +P + NSN F + N+ + P
Sbjct: 336 NFFNKE-------DINIYDSEKSITEPIKLEKEEVQIPIDLNSNNKIDIFGN--NINKLP 386
Query: 123 ETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVEN 182
E + + G ++T + Q + YA + + + C ++
Sbjct: 387 NNTE-------------LLKNIGIKEKNTLENNNDFYTSKQNEIYYANKNDECLNSCNKD 433
Query: 183 RFHANIDPSKNKEAES-------ELNRV-----IKKS----MFEKMKIVGQFNLGFIIVK 226
+ + I+ S K+ ++ E NR IK++ + MKI+GQFN +I+++
Sbjct: 434 NY-SKIEKSLQKDNKNPDILYLNEHNRNSSPINIKENKSNNFYVDMKIIGQFNNTYILIE 492
Query: 227 YDSDLFIIDQHATDEKYNFETLQ---KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFY 283
D +L+IIDQHA EK FE + + + SQ L+ P + L++ I ++N +F
Sbjct: 493 KDKELYIIDQHAAHEKVLFEKFKCEIEKGYVISQILLSPVVIELSEDEFNIYEENKDIFK 552
Query: 284 KNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEEL----LFMLQHTNSTEHCRPSRIR 339
+G FS ++ + + + +P+ LG+ ++E L L+ L++ S E S I+
Sbjct: 553 NSG--FSVETFGEYTINIKEVPL----ILGKPNVENLFMDILYNLKNMKSKE---TSTIK 603
Query: 340 A-MFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
A+ AC+ +V L E+ L+ +M ++ P+
Sbjct: 604 YNAIATLACKSAVKANDNLKEEEIKKLIEDMLILNNPY 641
>gi|85000941|ref|XP_955189.1| DNA mismatch repair protein [Theileria annulata strain Ankara]
gi|65303335|emb|CAI75713.1| DNA mismatch repair protein, putative [Theileria annulata]
Length = 847
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 130/314 (41%), Gaps = 95/314 (30%)
Query: 157 LDIIQDQLKARYARRTVQAQDRCVENRFHANIDPS----KNKEAESEL--NRVIKKSMFE 210
L++++D+ + +RR + R E R + P K K +L + + +FE
Sbjct: 511 LELVEDECCSSISRRIKICERRLFE-RNMKKLLPEESIMKCKLTNEDLMEHNFLNPQVFE 569
Query: 211 KMKIVGQFNLGFIIVK---------YDSDLFIIDQHATDEKYN----------------- 244
KM+++GQFN FII K Y+ L++IDQHA DEK
Sbjct: 570 KMELIGQFNKSFIITKLTFPDIKTKYNFSLYVIDQHAADEKAKYHVTVLAQAAPITIISI 629
Query: 245 --FETLQKTTL----IKSQK-----LVVPQN--LHLTKINQC----------------IL 275
F +L +TL I S ++ P +++++IN+ +
Sbjct: 630 QLFSSLSGSTLHSYRISSLSRGYWLVIYPLRGLINMSEINRIDTIFNTSKFFKINNVQVA 689
Query: 276 KDNLPVFYKNGFEFS------FDSSDDGNVLLTS--------------LPMSKNTTLGRE 315
++++ V NGF+ F +DG+V ++S LP LG +
Sbjct: 690 ENSMNVLLSNGFDIKVCREKEFLVFNDGDVCMSSVLTEKIGRGVYVNTLPQILGKVLGED 749
Query: 316 DIEELLFMLQHTNSTEHC-------------RPSRIRAMFASRACRKSVMIGRALSVGEM 362
D + L L + E+ RP +I ++ AS+AC+ SV G L+ G+M
Sbjct: 750 DFIDFLNELSTIDYIENNQQSDYIWGLGNIPRPHKIWSILASKACKSSVRAGDGLTNGQM 809
Query: 363 TGLVRNMGRIDQPW 376
+++ MG + PW
Sbjct: 810 KNIIKKMGTLIHPW 823
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 33/51 (64%)
Query: 4 VNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVK 54
++ ++ F++ P ILN+ M+ D+VDVN++PDKR ++ E ++ T K
Sbjct: 267 ISAIFSHFSSRAKPSFILNLTMNCDNVDVNISPDKRSAYIYSEDYIIRTFK 317
>gi|380743238|gb|AFE19032.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743248|gb|AFE19037.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743270|gb|AFE19048.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743278|gb|AFE19052.1| PMS1-like protein, partial [Trichomonas vaginalis]
Length = 496
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 68/129 (52%), Gaps = 3/129 (2%)
Query: 203 VIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVP 262
I+ F+ M+I+GQ+N FII KY D++ IDQHA E NFE L+K I+SQ+L+ P
Sbjct: 364 AIETKAFKDMEIIGQWNQSFIITKYGCDIYAIDQHAAMEAQNFEKLRKKCSIQSQRLISP 423
Query: 263 QNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLF 322
+ T +D + G+++ D ++ + +P G +D+ EL+
Sbjct: 424 IVISATPQEISAAEDCKQKCKEFGYDYDI---SDNSIHVKKIPSITTVATGSDDLLELIT 480
Query: 323 MLQHTNSTE 331
ML + +++
Sbjct: 481 MLHESPASQ 489
>gi|380743260|gb|AFE19043.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743282|gb|AFE19054.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743298|gb|AFE19062.1| PMS1-like protein, partial [Trichomonas vaginalis]
Length = 496
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 68/129 (52%), Gaps = 3/129 (2%)
Query: 203 VIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVP 262
I+ F+ M+I+GQ+N FII KY D++ IDQHA E NFE L+K I+SQ+L+ P
Sbjct: 364 AIETKAFKDMEIIGQWNQSFIITKYGCDIYAIDQHAAMEAQNFEKLRKKCSIQSQRLISP 423
Query: 263 QNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLF 322
+ T +D + G+++ D ++ + +P G +D+ EL+
Sbjct: 424 IVISATPQEISAAEDCKQKCKEFGYDYDI---SDNSIHVKKIPSITTVATGSDDLLELIT 480
Query: 323 MLQHTNSTE 331
ML + +++
Sbjct: 481 MLHESPASQ 489
>gi|380743068|gb|AFE18947.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743188|gb|AFE19007.1| PMS1-like protein, partial [Trichomonas vaginalis]
Length = 496
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 68/129 (52%), Gaps = 3/129 (2%)
Query: 203 VIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVP 262
I+ F+ M+I+GQ+N FII KY D++ IDQHA E NFE L+K I+SQ+L+ P
Sbjct: 364 AIETKAFKDMEIIGQWNQSFIITKYGCDIYAIDQHAAMEAQNFEKLRKKCSIQSQRLISP 423
Query: 263 QNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLF 322
+ T +D + G+++ D ++ + +P G +D+ EL+
Sbjct: 424 IVISATPQEISAAEDCKQKCKEFGYDYDI---SDNSIHVKKIPSITTVATGSDDLLELIT 480
Query: 323 MLQHTNSTE 331
ML + +++
Sbjct: 481 MLHESPASQ 489
>gi|429963872|gb|ELA45870.1| hypothetical protein VCUG_02641 [Vavraia culicis 'floridensis']
Length = 583
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 84/185 (45%), Gaps = 33/185 (17%)
Query: 204 IKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQ 263
++K + ++++GQFN GFI+ + L I DQHA DE YNFE ++K Q L+ P
Sbjct: 405 VQKKDLKNVRVIGQFNQGFILGTLNGYLMIFDQHAVDEIYNFEMIKKNIKFSKQSLLKPI 464
Query: 264 NLHLT------------KINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTT 311
N+ + +++Q +L + FE + LT+ P
Sbjct: 465 NVQDSSMLLSDDSSSPNRLDQAMLTN-----LNRLFEIKENK-------LTASPSFNKHL 512
Query: 312 LGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGR 371
D EL+ ST S + AS+ACR S+MIG L++ M ++ N+
Sbjct: 513 FNINDYMELV-------STGEV--SSLTNKIASKACRMSIMIGDKLNMCTMNRIIYNLSE 563
Query: 372 IDQPW 376
+D PW
Sbjct: 564 LDNPW 568
>gi|266618993|ref|ZP_06111928.1| DNA mismatch repair protein MutL [Clostridium botulinum Bf]
gi|263529157|gb|EEZ28463.1| DNA mismatch repair protein MutL [Clostridium botulinum Bf]
Length = 574
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 95/391 (24%), Positives = 184/391 (47%), Gaps = 56/391 (14%)
Query: 14 HQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATV--KVH--ITDSYAIGFTVDG 69
+ YPF ++ I++ + +DVNV P K ++ E+ + T+ VH I FT
Sbjct: 187 NSYPFFVIFIDIFPEYIDVNVHPTKSEVKFKDERAMFKTIFDAVHEAIKGELKESFT--- 243
Query: 70 NNMNQSMEQDPSSDVDMEKIQRSNSEEVE--HETIPVPSEDNSN-----FSHEANLQQSP 122
N N+ D+++ ++S +E ++ E + +P + NSN F + N+ + P
Sbjct: 244 NFFNKE-------DINIYDSEKSIAETIKPGKEEVQIPIDLNSNNKIDIFGN--NINKLP 294
Query: 123 ETVE----PDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQL-KARYAR--RTVQA 175
E D ++ I +++ S + T D + K Y++ + +Q
Sbjct: 295 NNTELLKNIDIKEKNI--LENNDNFYTSNQNEIYYTNKNDKCLNSCNKDDYSKIEKPLQK 352
Query: 176 QDRCVENRF--HANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFI 233
++ ++N + N + S E++ N + + MKI+GQFN +I+++ D +L+I
Sbjct: 353 DNKNLDNLYLNEHNTNSSSINIKENKPN-----NFYVDMKIIGQFNNTYILIEKDKELYI 407
Query: 234 IDQHATDEKYNFETLQ---KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFS 290
IDQHA EK FE + + + SQ L+ P + L++ I ++N +F +G FS
Sbjct: 408 IDQHAAHEKVLFEKFKSEIEKGYVVSQILLSPVVIELSEDEFNIYEENKDIFKNSG--FS 465
Query: 291 FDSSDDGNVLLTSLPMSKNTTLGREDIEEL----LFMLQHTNSTEHCRPSRIRA-MFASR 345
++ + + + +P+ LG+ ++E L L+ L++ S E S I+ A+
Sbjct: 466 VEAFGECTINIKEVPL----ILGKPNVENLFMDILYNLKNMKSKE---TSTIKYNAIATL 518
Query: 346 ACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
AC+ +V L E+ L+ +M ++ P+
Sbjct: 519 ACKSAVKANDNLKEEEIKKLIEDMLILNNPY 549
>gi|340756899|ref|ZP_08693503.1| DNA mismatch repair protein mutL [Fusobacterium varium ATCC 27725]
gi|340578054|gb|EES62729.2| DNA mismatch repair protein mutL [Fusobacterium varium ATCC 27725]
Length = 640
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 86/387 (22%), Positives = 166/387 (42%), Gaps = 44/387 (11%)
Query: 3 LVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYA 62
+++ Y + +YPF IL +E+ VDVNV P K+ + +E + V I + +
Sbjct: 258 IIDGYYTKLMKGKYPFAILFLEIDPKEVDVNVHPSKKIVKFSNESNIYGRVLKEIKNCFE 317
Query: 63 IGFTVDGNNMNQSMEQDPSSDVDMEKIQR---SNSEEVEHETIPVPSEDNSNFSHEANLQ 119
M ++ E++ + +D + + +E ++ E I V + +
Sbjct: 318 GDDIFVSPTMEKTFEKENEALIDFSEFSKFVPMKAENIKFEGIEVEKYPKT--------E 369
Query: 120 QSPETVEPDTPDETIEVIDD-MPRLQGSYRQSTPVTLS--LDIIQDQLKARYARRTV--- 173
+ E + D ET E +D ++ ++TP + + + + K+ + V
Sbjct: 370 REAEVSDRDIKKETTESNEDNFEKIFIEKGRTTPFEIKEEIKVFEGNEKSDIIKTDVVSE 429
Query: 174 ---QAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSD 230
+ +D E+R I S+ K A S+++ K+ GQ FI+V+ D
Sbjct: 430 VKSEFKDEIKEDR----IIVSEEKNAASKID----------FKVFGQIFDSFILVERDGV 475
Query: 231 LFIIDQHATDEKYNFETLQK---TTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGF 287
I DQH E+ +E L+K T + Q+L+VP + L + ++ +N+ F GF
Sbjct: 476 FEIYDQHIVHERILYEKLKKEYYGTNVSRQQLLVPIRITLDPRERELIFENIEYF--TGF 533
Query: 288 EFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRAC 347
F D D+ V++ S+P+ + D E +F N E+ ++ S +C
Sbjct: 534 GFEIDEFDENEVVIRSVPV-----MNFRDSTENIFKNIIKNLKENKETDIRESIIISMSC 588
Query: 348 RKSVMIGRALSVGEMTGLVRNMGRIDQ 374
+ ++ LS+ EM ++R + I +
Sbjct: 589 KGAIKANEKLSLNEMETIIRKLHEIGE 615
>gi|255076207|ref|XP_002501778.1| predicted protein [Micromonas sp. RCC299]
gi|226517042|gb|ACO63036.1| predicted protein [Micromonas sp. RCC299]
Length = 781
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 95/214 (44%), Gaps = 32/214 (14%)
Query: 192 KNKEAESELNRV-------IKKSMFEKMKIVGQFNLGFIIVKYDS-DLFIIDQHATDEKY 243
K + A+ +LN + I +++ + K++ Q+ FI+ S DL IDQHA DE+
Sbjct: 525 KRRRADRDLNVMETVPVAEISRNLLDDAKVLTQWGKKFILAMSASGDLLAIDQHAADERI 584
Query: 244 NFETLQKTTLIKS------------------QKLVVPQNLHLTKINQCILKDNLPVFYKN 285
E L + +LI+S L Q LT IL+ N + +
Sbjct: 585 LLEQL-RASLIRSVDHRGKLHTYSPASPMPTTVLGRSQPCLLTASELAILRANSSLVWSW 643
Query: 286 GFEF----SFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAM 341
G+ + + D D V LT LP + T LG + + E L + T T P+ R +
Sbjct: 644 GWRWEDVANCDGDTDEGVKLTGLPTVEGTMLGADALAEYLRQVSVTGPTSAPPPALHR-L 702
Query: 342 FASRACRKSVMIGRALSVGEMTGLVRNMGRIDQP 375
AS+ACR ++M G L E L+ ++ R + P
Sbjct: 703 LASKACRSAIMFGDNLGQDECVALLGSLTRTELP 736
>gi|237795208|ref|YP_002862760.1| DNA mismatch repair protein [Clostridium botulinum Ba4 str. 657]
gi|259509929|sp|C3KX34.1|MUTL_CLOB6 RecName: Full=DNA mismatch repair protein MutL
gi|229264105|gb|ACQ55138.1| DNA mismatch repair protein [Clostridium botulinum Ba4 str. 657]
Length = 666
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 95/391 (24%), Positives = 184/391 (47%), Gaps = 56/391 (14%)
Query: 14 HQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATV--KVH--ITDSYAIGFTVDG 69
+ YPF ++ I++ + +DVNV P K ++ E+ + T+ VH I FT
Sbjct: 279 NSYPFFVIFIDIFPEYIDVNVHPTKSEVKFKDERAMFKTIFDAVHEAIKGELKESFT--- 335
Query: 70 NNMNQSMEQDPSSDVDMEKIQRSNSEEVE--HETIPVPSEDNSN-----FSHEANLQQSP 122
N N+ D+++ ++S +E ++ E + +P + NSN F + N+ + P
Sbjct: 336 NFFNKE-------DINIYDSEKSIAETIKPGKEEVQIPIDLNSNNKIDIFGN--NINKLP 386
Query: 123 ETVE----PDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQL-KARYAR--RTVQA 175
E D ++ I +++ S + T D + K Y++ + +Q
Sbjct: 387 NNTELLKNIDIKEKNI--LENNDNFYTSNQNEIYYTNKNDKCLNSCNKDDYSKIEKPLQK 444
Query: 176 QDRCVENRF--HANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFI 233
++ ++N + N + S E++ N + + MKI+GQFN +I+++ D +L+I
Sbjct: 445 DNKNLDNLYLNEHNTNSSSINIKENKPN-----NFYVDMKIIGQFNNTYILIEKDKELYI 499
Query: 234 IDQHATDEKYNFETLQ---KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFS 290
IDQHA EK FE + + + SQ L+ P + L++ I ++N +F +G FS
Sbjct: 500 IDQHAAHEKVLFEKFKSEIEKGYVVSQILLSPVVIELSEDEFNIYEENKDIFKNSG--FS 557
Query: 291 FDSSDDGNVLLTSLPMSKNTTLGREDIEEL----LFMLQHTNSTEHCRPSRIRA-MFASR 345
++ + + + +P+ LG+ ++E L L+ L++ S E S I+ A+
Sbjct: 558 VEAFGECTINIKEVPL----ILGKPNVENLFMDILYNLKNMKSKE---TSTIKYNAIATL 610
Query: 346 ACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
AC+ +V L E+ L+ +M ++ P+
Sbjct: 611 ACKSAVKANDNLKEEEIKKLIEDMLILNNPY 641
>gi|380743056|gb|AFE18941.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743066|gb|AFE18946.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743110|gb|AFE18968.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743142|gb|AFE18984.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743168|gb|AFE18997.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743176|gb|AFE19001.1| PMS1-like protein, partial [Trichomonas vaginalis]
Length = 496
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 70/134 (52%), Gaps = 13/134 (9%)
Query: 203 VIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVP 262
I+ F+ M+I+GQ+N FII KY D++ IDQHA E NFE L+K I+SQ+L+ P
Sbjct: 364 AIETKAFKDMEIIGQWNQSFIITKYGCDIYAIDQHAAMEAQNFEKLRKKCSIQSQRLISP 423
Query: 263 QNLHLT-----KINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDI 317
+ T +C K F + +D SD+ ++ + +P G +D+
Sbjct: 424 IVISATPQEISAAEECKQK-------CKEFGYDYDISDN-SIHVKKIPSITTVATGSDDL 475
Query: 318 EELLFMLQHTNSTE 331
EL+ ML + +++
Sbjct: 476 LELITMLHESPASQ 489
>gi|380743128|gb|AFE18977.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743198|gb|AFE19012.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743208|gb|AFE19017.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743288|gb|AFE19057.1| PMS1-like protein, partial [Trichomonas vaginalis]
Length = 496
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 70/134 (52%), Gaps = 13/134 (9%)
Query: 203 VIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVP 262
I+ F+ M+I+GQ+N FII KY D++ IDQHA E NFE L+K I+SQ+L+ P
Sbjct: 364 AIETKAFKDMEIIGQWNQSFIITKYGCDIYAIDQHAAMEAQNFEKLRKKCSIQSQRLISP 423
Query: 263 QNLHLT-----KINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDI 317
+ T +C K F + +D SD+ ++ + +P G +D+
Sbjct: 424 IVISATPQEISAAEECKQK-------CKEFGYDYDISDN-SIHVKKIPSITTVATGSDDL 475
Query: 318 EELLFMLQHTNSTE 331
EL+ ML + +++
Sbjct: 476 LELITMLHESPASQ 489
>gi|380743060|gb|AFE18943.1| PMS1-like protein, partial [Trichomonas vaginalis]
Length = 496
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 70/134 (52%), Gaps = 13/134 (9%)
Query: 203 VIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVP 262
I+ F+ M+I+GQ+N FII KY D++ IDQHA E NFE L+K I+SQ+L+ P
Sbjct: 364 AIETKAFKDMEIIGQWNQSFIITKYGCDIYAIDQHAAMEAQNFEKLRKKCSIQSQRLISP 423
Query: 263 QNLHLT-----KINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDI 317
+ T +C K F + +D SD+ ++ + +P G +D+
Sbjct: 424 IVISATPQEISAAEECKQK-------CKEFGYDYDISDN-SIHVKKIPSITTVATGSDDL 475
Query: 318 EELLFMLQHTNSTE 331
EL+ ML + +++
Sbjct: 476 LELITMLHESPASQ 489
>gi|380743094|gb|AFE18960.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743098|gb|AFE18962.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743164|gb|AFE18995.1| PMS1-like protein, partial [Trichomonas vaginalis]
Length = 496
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 70/134 (52%), Gaps = 13/134 (9%)
Query: 203 VIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVP 262
I+ F+ M+I+GQ+N FII KY D++ IDQHA E NFE L+K I+SQ+L+ P
Sbjct: 364 AIETKAFKDMEIIGQWNQSFIITKYGCDIYAIDQHAAMEAQNFEKLRKKCSIQSQRLISP 423
Query: 263 QNLHLT-----KINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDI 317
+ T +C K F + +D SD+ ++ + +P G +D+
Sbjct: 424 IVISATPQEISAAEECKQK-------CKEFGYDYDISDN-SIHVKKIPSITTVATGSDDL 475
Query: 318 EELLFMLQHTNSTE 331
EL+ ML + +++
Sbjct: 476 LELITMLHESPASQ 489
>gi|380743100|gb|AFE18963.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743264|gb|AFE19045.1| PMS1-like protein, partial [Trichomonas vaginalis]
Length = 496
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 70/134 (52%), Gaps = 13/134 (9%)
Query: 203 VIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVP 262
I+ F+ M+I+GQ+N FII KY D++ IDQHA E NFE L+K I+SQ+L+ P
Sbjct: 364 AIETKAFKDMEIIGQWNQSFIITKYGCDIYAIDQHAAMEAQNFEKLRKKCSIQSQRLISP 423
Query: 263 QNLHLT-----KINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDI 317
+ T +C K F + +D SD+ ++ + +P G +D+
Sbjct: 424 IVISATPQEISAAEECKQK-------CKEFGYDYDISDN-SIHVKKIPSITTVATGSDDL 475
Query: 318 EELLFMLQHTNSTE 331
EL+ ML + +++
Sbjct: 476 LELITMLHESPASQ 489
>gi|380743294|gb|AFE19060.1| PMS1-like protein, partial [Trichomonas vaginalis]
Length = 496
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 70/134 (52%), Gaps = 13/134 (9%)
Query: 203 VIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVP 262
I+ F+ M+I+GQ+N FII KY D++ IDQHA E NFE L+K I+SQ+L+ P
Sbjct: 364 AIETKAFKDMEIIGQWNQSFIITKYGCDIYAIDQHAAMEAQNFEKLRKKCSIQSQRLISP 423
Query: 263 QNLHLT-----KINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDI 317
+ T +C K F + +D SD+ ++ + +P G +D+
Sbjct: 424 IVISATPQEISAAEECKQK-------CKEFGYDYDISDN-SIHVKKIPSITTVATGSDDL 475
Query: 318 EELLFMLQHTNSTE 331
EL+ ML + +++
Sbjct: 476 LELITMLHESPASQ 489
>gi|380743046|gb|AFE18936.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743120|gb|AFE18973.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743134|gb|AFE18980.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743138|gb|AFE18982.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743144|gb|AFE18985.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743184|gb|AFE19005.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743206|gb|AFE19016.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743220|gb|AFE19023.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743240|gb|AFE19033.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743250|gb|AFE19038.1| PMS1-like protein, partial [Trichomonas vaginalis]
gi|380743252|gb|AFE19039.1| PMS1-like protein, partial [Trichomonas vaginalis]
Length = 496
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 70/134 (52%), Gaps = 13/134 (9%)
Query: 203 VIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVP 262
I+ F+ M+I+GQ+N FII KY D++ IDQHA E NFE L+K I+SQ+L+ P
Sbjct: 364 AIETKAFKDMEIIGQWNQSFIITKYGCDIYAIDQHAAMEAQNFEKLRKKCSIQSQRLISP 423
Query: 263 QNLHLT-----KINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDI 317
+ T +C K F + +D SD+ ++ + +P G +D+
Sbjct: 424 IVISATPQEISAAEECKQK-------CKEFGYDYDISDN-SIHVKKIPSITTVATGSDDL 475
Query: 318 EELLFMLQHTNSTE 331
EL+ ML + +++
Sbjct: 476 LELITMLHESPASQ 489
>gi|373123476|ref|ZP_09537322.1| DNA mismatch repair protein MutL [Erysipelotrichaceae bacterium
21_3]
gi|371660809|gb|EHO26053.1| DNA mismatch repair protein MutL [Erysipelotrichaceae bacterium
21_3]
Length = 695
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 92/409 (22%), Positives = 176/409 (43%), Gaps = 62/409 (15%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDH----EKLLLATV-----------KVHITD 59
+YP +++++ M VDVNV P K +I + EKLL T+ +V+IT
Sbjct: 278 RYPIVVIDLLMDAQLVDVNVHPSKWEIRLSKEKQLEKLLYETIRKALQEQLEVPRVNITK 337
Query: 60 SYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSH--EAN 117
+ V+ + + E+D S E++ N + E PS D EA+
Sbjct: 338 E-TVKEKVEEQELQFTYERDDSISRLHEEV---NDSFIHPEKNEKPSLDMEELRRKIEAD 393
Query: 118 LQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARY----ARRTV 173
+ E+ P P +T E++ ++ SY ++ + + +K ++ +
Sbjct: 394 KNRRKESAAPIQP-KTKELLPEIREETASYESEDSTSVKAETEEADVKVQHEDTDKTEVL 452
Query: 174 QAQDRCVENRFHANIDPS-------------------KNKEAESELNRVIKKSMFEKMKI 214
A D E A I+P K+AE E ++ + S+ ++++
Sbjct: 453 PAADTGSEAHTQA-IEPDISSDAAVAYMEISQSEELVYEKKAEVEQSQPLNPSL-PQLRV 510
Query: 215 VGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIK---SQKLVVPQNLHLTKIN 271
+GQF+ +I+ + + L+IIDQHA E+Y++E ++K L +Q L++P + T I+
Sbjct: 511 IGQFHSCYILAEGEKGLYIIDQHAAQERYHYEIIRKQILDGNNDTQPLLLPITIEST-IS 569
Query: 272 QCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTE 331
D+L + + D + LP L +D+EE F+ + E
Sbjct: 570 AVSQADDLNALLEQ-LGIHLEVFGDHTFVCRQLP------LWMKDVEEEAFLCDMIDIWE 622
Query: 332 HCRPSRI----RAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+ + + A+ AC S+ R+L++ EM ++ ++ +QP+
Sbjct: 623 KDKEISLDKLRKHAIATMACHSSIRFNRSLTLDEMKRVIEDLAHCEQPF 671
>gi|401679847|ref|ZP_10811771.1| DNA mismatch repair protein, C-terminal domain protein [Veillonella
sp. ACP1]
gi|400218974|gb|EJO49845.1| DNA mismatch repair protein, C-terminal domain protein [Veillonella
sp. ACP1]
Length = 652
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 92/400 (23%), Positives = 173/400 (43%), Gaps = 58/400 (14%)
Query: 1 MKLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITD 59
+K ++ YH YP ++L+I + + VD+NV P K ++ + +K++ V I +
Sbjct: 265 LKAIDNAYHALLPKSGYPLVLLHITVPANMVDINVHPRKSEVKFEDDKIIFKAVYHAILN 324
Query: 60 SYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANL- 118
+ N +++ E++ SS V + + S +++ V S+ H A
Sbjct: 325 AL-------NNPLHKRYERESSSYVQPLETESKVSGYDSYQSPQVFSDHIDTAEHIATAI 377
Query: 119 ----------QQSPETVEPDTPDETIEVIDDM-------PRLQGSYRQSTPVTLSLDIIQ 161
+ E + DT D +D + P + ++ Q + S
Sbjct: 378 DYDKVFGGRRTKGYEVLRQDTRD----FVDALKEKGFTPPAPKATFEQESFEESSF---- 429
Query: 162 DQLKARYARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLG 221
+ Y T + ++ RFH + + E E +R I+KS F M GQ
Sbjct: 430 TSVPTAYTSYTTEDKE-----RFHQ----IQEQHIEDE-SRDIQKSGFLPM---GQVASC 476
Query: 222 FIIVKYDSDLFIIDQHATDEKYNFETLQKTT-LIKSQKLVVPQNLHLTKINQCILKDNLP 280
+I+ K DL+IIDQHA E+ ++ L K++ I Q L+VP + T+ I++++
Sbjct: 477 YILAKKGDDLYIIDQHAAHERVRYDKLCKSSESIPMQSLLVPLYSNATEDEMNIVENDQQ 536
Query: 281 VFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIR- 339
GFE + + L P+ + +E I +F H +H +P++ +
Sbjct: 537 ALLDLGFEVELGGPN--QIKLVGAPVDLVESKAQE-ILSYVFTYLH----DHEQPTKAQL 589
Query: 340 --AMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPWV 377
M A +CR ++ G L++ +MT L+ ++ D+P+V
Sbjct: 590 RHEMLAYASCRGAIKSGHNLNMYQMTTLIEDLFHTDKPYV 629
>gi|260887306|ref|ZP_05898569.1| DNA mismatch repair protein MutL [Selenomonas sputigena ATCC 35185]
gi|330838940|ref|YP_004413520.1| DNA mismatch repair protein MutL [Selenomonas sputigena ATCC 35185]
gi|260862942|gb|EEX77442.1| DNA mismatch repair protein MutL [Selenomonas sputigena ATCC 35185]
gi|329746704|gb|AEC00061.1| DNA mismatch repair protein MutL [Selenomonas sputigena ATCC 35185]
Length = 640
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 80/380 (21%), Positives = 158/380 (41%), Gaps = 34/380 (8%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K ++ YH +P ++LNI + + SVDVNV P K ++ + E + V + D+
Sbjct: 266 KAIDNAYHSLLPKSGFPMVVLNIAVPQRSVDVNVHPQKSEMKFEDEGRIFKAVYKTVVDA 325
Query: 61 YAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQ 120
+ Q++E +S ++ ++R + E + + +F+ + +
Sbjct: 326 I--------RPVGQTLEDVAAS---VQNVERRYAMEPMQFVAATQASEEEDFAGNGSAKT 374
Query: 121 SPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCV 180
S + P + P + + QS +++ + A A V A V
Sbjct: 375 SFGIRYTENP---YQASPAQPAMSFAEAQS--------VLKGEGAAYSAHDGVPADGGLV 423
Query: 181 ENRFHANIDPSKNKEAESELNRVIKKSMFEK-MKIVGQFNLGFIIVKYDSDLFIIDQHAT 239
A P + AE L V + ++ + +GQ +L +II K L+I+DQHA
Sbjct: 424 REARDAAYKP-QGSTAEMPLADVSEAGLYHGGITPIGQVDLCYIIAKDKDGLYIVDQHAA 482
Query: 240 DEKYNFETLQKTT-LIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGN 298
E+ ++ I SQ+L+V L ++ +N +F + GF+ ++ + +
Sbjct: 483 HERILYDKFSAMAERIPSQQLLVHPILSFDAREAALVSENQELFRRLGFD--MEACGERD 540
Query: 299 VLLTSLPMSKNTTLGREDIEELLFML--QHTNSTEHCRPSRIRAMFASRACRKSVMIGRA 356
L +P + + I E+L L H + + R A A+ ACR ++ G
Sbjct: 541 FRLKEVPADVPVSEAEDMIREILARLYDMHETTAQEIR----HACLATMACRAAIKSGDE 596
Query: 357 LSVGEMTGLVRNMGRIDQPW 376
L+ +M ++ + + +P+
Sbjct: 597 LNFRQMQIVLEELSQTARPY 616
>gi|223983838|ref|ZP_03634003.1| hypothetical protein HOLDEFILI_01284 [Holdemania filiformis DSM
12042]
gi|223964201|gb|EEF68548.1| hypothetical protein HOLDEFILI_01284 [Holdemania filiformis DSM
12042]
Length = 667
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 92/413 (22%), Positives = 167/413 (40%), Gaps = 70/413 (16%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEK--------LLLAT 52
K + E Y + +YP ++L+IEM DVNV P K +I + E+ L T
Sbjct: 264 KAILEAYKNYIPQDRYPIVMLDIEMDSHLCDVNVHPSKWEIRLSKEQQLEFLIRDTLTRT 323
Query: 53 VKVHITDSYAIGFTV--DGNNMNQSMEQD---PSSDVDMEKIQRSN--------SEEVEH 99
++ H+ + + M Q E P++ V + ++ + SE+ E
Sbjct: 324 LREHMQAPEVMRVETPREKVEMPQLFETPVVVPANQVREDSVEANEWRRQAALMSEQRER 383
Query: 100 ETIPVPSEDNSNFSHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTL---- 155
E I P E + V P P+ I+ + + R+ +P+T
Sbjct: 384 EQIAAPLSREIPQDPEVTGKAEASAVLPAEPEALIK------KTEVENREGSPLTTPKPT 437
Query: 156 ----SLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPS-KNKEAESELNRVIKKSMFE 210
S D + DQL +DP + EA +E R + K F
Sbjct: 438 AKTSSADSLSDQLPE------------------PEPLDPRVQQTEASAEALRSVPKQTFP 479
Query: 211 KMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKS---QKLVVPQNLHL 267
+M+++ Q + +I+ + + L+I+DQHA E+ +FE +Q+ L + Q+L+VP L
Sbjct: 480 QMQVLAQMHGKYILAQDEHALYIVDQHAAQERVHFEEVQQRFLDQEPLMQELLVPIILEG 539
Query: 268 TKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHT 327
+ L++ + ++ +++ LP + +I+E F+
Sbjct: 540 SASVAARLQEMNELL--EPMHIHLENFGQNSLICRQLPAWMS------EIDEQAFLQDVL 591
Query: 328 NSTEHCRPSRI----RAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+ + R R R A+ AC S+ R LS+GEM ++ + +QP+
Sbjct: 592 DLWKDGREVRAEDLQRHRLATIACHHSIRFNRVLSIGEMQEVIEQLAHCEQPY 644
>gi|300855301|ref|YP_003780285.1| DNA mismatch repair protein MutL [Clostridium ljungdahlii DSM
13528]
gi|300435416|gb|ADK15183.1| predicted DNA mismatch repair protein MutL [Clostridium ljungdahlii
DSM 13528]
Length = 610
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 169/372 (45%), Gaps = 75/372 (20%)
Query: 14 HQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATV--KVH--ITDSYAIGFTVDG 69
+++PF IL I++ + VDVNV P K ++ +++ V +H + +S FT+D
Sbjct: 280 NKFPFFILFIDIFPEFVDVNVHPAKWEVKFSDSRMVFKFVFDAIHEALRESLKDSFTID- 338
Query: 70 NNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDT 129
+++D D+ + E E + + +P ++ +
Sbjct: 339 ------LKED-----DL----KPKKTETEIKEVQIP-------------------IDLKS 364
Query: 130 PDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANID 189
P+E I + + L +++S + + I++ + + A++ V
Sbjct: 365 PNEGIYIEKNGSSL---FKKSKENSNKNEFIKE------PKVSFTAKENAV--------- 406
Query: 190 PSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQ 249
SKNK+ E RV K F+ ++I+GQF+ +II + S+L++IDQHA EK FE +
Sbjct: 407 -SKNKQEEP---RVAK---FQPLRIIGQFHSTYIIAEDSSNLYMIDQHAAHEKILFEKYK 459
Query: 250 KTT---LIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPM 306
K+ ++ SQ L+ P + LT + +N +F K GF ++ + + +PM
Sbjct: 460 KSIQKGMVLSQVLITPVIMELTIKDYNCFIENRDLFKKTGFNVELFGNN--TISIREVPM 517
Query: 307 SKNTTLGREDIEELLF-MLQHTNSTEHCRPSRIRAM-FASRACRKSVMIGRALSVGEMTG 364
LG+ D++ L +L + + ++ + A+ AC+ ++ ++S EM
Sbjct: 518 ----ILGKPDMKNLFMDILDNLKNMGSGDTWEVKYLSLATLACKAAIKANASISEIEMNH 573
Query: 365 LVRNMGRIDQPW 376
L+ + ID P+
Sbjct: 574 LIEELRFIDDPF 585
>gi|387817994|ref|YP_005678339.1| DNA mismatch repair protein MutL [Clostridium botulinum H04402 065]
gi|322806036|emb|CBZ03603.1| DNA mismatch repair protein MutL [Clostridium botulinum H04402 065]
Length = 666
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 95/398 (23%), Positives = 182/398 (45%), Gaps = 70/398 (17%)
Query: 14 HQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATV--KVH--ITDSYAIGFTVDG 69
+ YPF ++ I++ + +DVNV P K ++ E+ + T+ VH I FT
Sbjct: 279 NSYPFFVIFIDIFPEYIDVNVHPTKSEVKFKDERAMFKTIFDAVHEAIKGELKESFT--- 335
Query: 70 NNMNQSMEQDPSSDVDMEKIQRSNSE--EVEHETIPVPSEDNSN-----FSHEANLQQSP 122
N N+ D+++ ++S +E ++E E + +P + NSN F + N+ + P
Sbjct: 336 NFFNKE-------DINIYDSEKSITEPIKLEKEEVQIPIDLNSNNKIDIFGN--NINKLP 386
Query: 123 ETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVEN 182
E + + G ++T + Q + YA + + + C ++
Sbjct: 387 NNTE-------------LLKNIGIKEKNTLENNNDFYTSKQNEIYYANKNDECLNSCNKD 433
Query: 183 RFHANIDPSKNKEAE--------------SELNRVIKK--SMFEKMKIVGQFNLGFIIVK 226
+ + I+ S K+ + S +N K + + MKI+GQFN +I+++
Sbjct: 434 NY-SKIEKSLQKDNKNPDTLYLNEHNTNSSSINIKENKPNNFYVDMKIIGQFNNTYILIE 492
Query: 227 YDSDLFIIDQHATDEKYNFETLQ---KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFY 283
D +L+IIDQHA EK FE + + + SQ L+ P + L++ I ++N +F
Sbjct: 493 KDKELYIIDQHAAHEKVLFEKFKSEIEKGYVISQILLSPVVIELSEDEFNIYEENKDIFK 552
Query: 284 KNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEEL----LFMLQHTNSTEHCRPSRIR 339
+G FS ++ + + + +P+ LG+ ++E L L+ L++ S E S I+
Sbjct: 553 NSG--FSVETFGEYTINIKEVPL----ILGKPNVENLFMDILYNLKNMKSKE---TSTIK 603
Query: 340 A-MFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
A+ AC+ +V L E+ L+ +M ++ P+
Sbjct: 604 YNAIATLACKSAVKANDNLKEEEIKKLIEDMLILNNPY 641
>gi|269316183|ref|XP_638891.4| MutL DNA mismatch repair protein [Dictyostelium discoideum AX4]
gi|256012918|gb|EAL65556.2| MutL DNA mismatch repair protein [Dictyostelium discoideum AX4]
Length = 1658
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 86/178 (48%), Gaps = 7/178 (3%)
Query: 203 VIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVP 262
VI K M + K + Q++ F+I + D + I+DQHA E+ E L++ +++ + P
Sbjct: 1458 VIPKEMLQNFKFITQWDNKFLICEADGIVLILDQHAVSERIKLEILERKYFGENKFDLCP 1517
Query: 263 ----QNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIE 318
LT+ +++ + GF+++F+ + ++ ++ +PM LG D+
Sbjct: 1518 MPERTRWSLTEYELELMRIYTKPLEQWGFKWTFNKT---SINISQVPMFCLVGLGVNDLR 1574
Query: 319 ELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
E L+ L+ + RP + AS+ACR ++ G LS L+ ++ + P+
Sbjct: 1575 EFLYQLESSKGATSNRPPAAHRILASKACRTAIKFGNKLSREICIKLLEDLNECNIPF 1632
>gi|170757624|ref|YP_001781347.1| DNA mismatch repair protein [Clostridium botulinum B1 str. Okra]
gi|429246330|ref|ZP_19209660.1| DNA mismatch repair protein [Clostridium botulinum CFSAN001628]
gi|229890122|sp|B1IM67.1|MUTL_CLOBK RecName: Full=DNA mismatch repair protein MutL
gi|169122836|gb|ACA46672.1| DNA mismatch repair protein MutL [Clostridium botulinum B1 str.
Okra]
gi|428756640|gb|EKX79182.1| DNA mismatch repair protein [Clostridium botulinum CFSAN001628]
Length = 666
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 95/398 (23%), Positives = 182/398 (45%), Gaps = 70/398 (17%)
Query: 14 HQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATV--KVH--ITDSYAIGFTVDG 69
+ YPF ++ I++ + +DVNV P K ++ E+ + T+ VH I FT
Sbjct: 279 NSYPFFVIFIDIFPEYIDVNVHPTKSEVKFKDERAMFKTIFDAVHEAIKGELKESFT--- 335
Query: 70 NNMNQSMEQDPSSDVDMEKIQRSNSE--EVEHETIPVPSEDNSN-----FSHEANLQQSP 122
N N+ D+++ ++S +E ++E E + +P + NSN F + N+ + P
Sbjct: 336 NFFNKE-------DINIYDSEKSITEPIKLEKEEVQIPIDLNSNNKIDIFGN--NINKLP 386
Query: 123 ETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVEN 182
E + + G ++T + Q + YA + + + C ++
Sbjct: 387 NNTE-------------LLKNIGVKAKNTLENNNDFYTSKQNEIYYANKNDECLNSCNKD 433
Query: 183 RFHANIDPSKNKEAE--------------SELNRVIKK--SMFEKMKIVGQFNLGFIIVK 226
+ + I+ S K+ + S +N K + + MKI+GQFN +I+++
Sbjct: 434 NY-SKIEKSLQKDNKNPDTLYLNEHNTNSSSINIKENKPNNFYVDMKIIGQFNNTYILIE 492
Query: 227 YDSDLFIIDQHATDEKYNFETLQ---KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFY 283
D +L+IIDQHA EK FE + + + SQ L+ P + L++ I ++N +F
Sbjct: 493 KDKELYIIDQHAAHEKVLFEKFKSEIEKGYVISQILLSPVVIELSEDEFNIYEENKDIFK 552
Query: 284 KNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEEL----LFMLQHTNSTEHCRPSRIR 339
+G FS ++ + + + +P+ LG+ ++E L L+ L++ S E S I+
Sbjct: 553 NSG--FSVETFGEYTINIKEVPL----ILGKPNVENLFMDILYNLKNMKSKE---TSTIK 603
Query: 340 A-MFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
A+ AC+ +V L E+ L+ +M ++ P+
Sbjct: 604 YNAIATLACKSAVKANDNLKEEEIKKLIEDMLILNNPY 641
>gi|419718743|ref|ZP_14246049.1| DNA mismatch repair protein, C-terminal domain / MutL C-terminal
dimerization domain multi-domain protein
[Lachnoanaerobaculum saburreum F0468]
gi|383305083|gb|EIC96462.1| DNA mismatch repair protein, C-terminal domain / MutL C-terminal
dimerization domain multi-domain protein
[Lachnoanaerobaculum saburreum F0468]
Length = 652
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 158/381 (41%), Gaps = 48/381 (12%)
Query: 14 HQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMN 73
HQYPF L E+ D VDVNV P K ++ + K + + + + +
Sbjct: 277 HQYPFCALKFEL--DGVDVNVHPRKMEVRFSDRNFVYDNTKEAVEEIFTAQSAIREVPIG 334
Query: 74 QSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPDET 133
+S + +KI S E E++ + E + F + + S + + P E
Sbjct: 335 KSSNE--------KKIFVSTPEPFENKRRDLTGEFQNTFKDKKTYKSSDDEINWTVPKEN 386
Query: 134 I-EVIDDMPRLQGSYRQSTPVTLS-LDIIQDQLKARYARRTVQAQDRCVENRFHA----- 186
+ DDM ++ S + ++ +I+ + + +V + F
Sbjct: 387 MYNPRDDMSLIKDEKSNSMYIDINDFNILNTDISDTKSDTSVSTNNAVYNKNFEVGNVSN 446
Query: 187 NIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFE 246
NI PS+ +SE + MK+VGQ + IV+ + +L+IIDQHA EK +E
Sbjct: 447 NIKPSQLSFFDSESKKY--------MKVVGQVFDTYWIVQLEKELYIIDQHAAHEKVMYE 498
Query: 247 TL---QKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGF---EFSFDSSDDGNV- 299
L K SQ + P + LT + Q +LKD++ F K GF EF ++
Sbjct: 499 RLLKESKENRPSSQMINPPVIVTLTDVEQNVLKDHMDEFRKIGFDIEEFGGKEYKINSIP 558
Query: 300 -LLTSLPMSKNTTLGREDIEELLF--MLQHTNSTEHCRPSR-IRAMFASRACRKSVMIGR 355
+ S+P ++ LF ML + + + PS I A AS AC+ ++
Sbjct: 559 NIFPSIPKAE------------LFNEMLSDSTNYDIISPSELILAKVASMACKAAIKGNM 606
Query: 356 ALSVGEMTGLVRNMGRIDQPW 376
+S+ E L + ++ P+
Sbjct: 607 RISLLEANELFDELLSLENPY 627
>gi|373454822|ref|ZP_09546685.1| DNA mismatch repair protein MutL [Dialister succinatiphilus YIT
11850]
gi|371935518|gb|EHO63264.1| DNA mismatch repair protein MutL [Dialister succinatiphilus YIT
11850]
Length = 637
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 89/390 (22%), Positives = 171/390 (43%), Gaps = 55/390 (14%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K V+ YH + YP ++L+ ++ +S+DVNV P KR+I E+ + V + +
Sbjct: 266 KAVDNAYHSLLPKNGYPLMVLSFQVPPESIDVNVHPQKREIKFSDEQSVFRLVYHGVLGT 325
Query: 61 YAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQ 120
T D + + M DP +V E S VE + + P ++
Sbjct: 326 LTSQSTAD--TIAREMIHDPGHEVVKEHDFNPGSIRVEDKPLGKP-----------DIGL 372
Query: 121 SPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQ--AQDR 178
S ET R + S+ + +P S + + Q + R A D
Sbjct: 373 SEET-----------------RPKSSWGEPSP---SYEESRGQGADHFGERRAPSFAPDT 412
Query: 179 CVENRF--HANIDPSKNKEAESELNRVIKKSMFEKMK------IVGQFNLGFIIVKYDSD 230
++ F H+ D + +E + E + +FE+ K +GQ + FI+ ++ D
Sbjct: 413 EEKDLFTNHSVFDEYRKEEPKRE--HLETDPLFEEEKQEDPVIPLGQVSDCFILCQHGKD 470
Query: 231 LFIIDQHATDEKYNFETL-QKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEF 289
L IIDQHA E+ ++ L ++ I Q++++P +H+ + +L+D+ K G
Sbjct: 471 LLIIDQHAAHERVRYDHLAERAEGIPVQEILIPYLIHVDSGDVNLLEDHRADIEKLG--I 528
Query: 290 SFDSSDDGNVLLTSLPMSKNTTLGREDIEELLF-MLQHTNSTEHCRPSRIR-AMFASRAC 347
+F+ + + +T P L ++E ++ +++ + + P +R M A AC
Sbjct: 529 TFEQAGPDVIRITGSP----EDLSAAEMERVMGDIVKAYHEKDVPSPETMRHRMMAYAAC 584
Query: 348 RKSVMIGRALSVGEMTGLVRNMGRIDQPWV 377
R ++ G L++ +M L+R++ +P+V
Sbjct: 585 RGAIKRGDPLNIRQMKELIRDLFHTSRPFV 614
>gi|116626082|ref|YP_828238.1| DNA mismatch repair protein MutL [Candidatus Solibacter usitatus
Ellin6076]
gi|122251851|sp|Q01QW7.1|MUTL_SOLUE RecName: Full=DNA mismatch repair protein MutL
gi|116229244|gb|ABJ87953.1| DNA mismatch repair protein MutL [Candidatus Solibacter usitatus
Ellin6076]
Length = 660
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 152/394 (38%), Gaps = 71/394 (18%)
Query: 1 MKLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITD 59
+ ++ YH YPF +L +E + VDVNV P K ++ H L ++ I +
Sbjct: 294 LHALSSAYHNLMPASAYPFALLFLECDAEEVDVNVHPSKTEVRFRHGSFLHDFIRDSIRE 353
Query: 60 SYAIGFTVDGNNMNQSMEQDPS---SDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSH-- 114
ME P+ S V M ++ + S FS
Sbjct: 354 RL--------------MESRPAPTFSPVPMAAPPAQQGAQLPY----------SEFSQML 389
Query: 115 EANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQ 174
E Q + E EP E MP + R + P T LD ++
Sbjct: 390 ENEQQAASEMAEPAIAGEPA-----MPEF--NLRATAPPTPRLDFSAPPIEV-------- 434
Query: 175 AQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFII 234
A + +D E+ + S ++ +GQ + FII L+II
Sbjct: 435 APGPPPSGKLSRRLDMHGEFPLEAIPAPEMSLSALSDLRPLGQIHESFIIAAGRDGLWII 494
Query: 235 DQHATDEKYNFETLQK---TTLIKSQKLVVPQNLHLT---KINQCILKDNLPVFYKNGFE 288
DQH E+ FE + K +++Q+L++P L L+ +I+ + D L + +GFE
Sbjct: 495 DQHVAHERILFEQVLKQRAAGRVETQRLLMPMILQLSAEQQIDYARIADEL---HASGFE 551
Query: 289 FSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFML-------QHTNSTEHCRPSRIRAM 341
+ GN + + +G +D+E +LF + TNS + R R +
Sbjct: 552 ----TEPFGNRTIAV--KAAPAAVGPQDLERILFEILEIAENEMRTNSLDDLR----RNI 601
Query: 342 FASRACRKSVMIGRALSVGEMTGLVRNMGRIDQP 375
AS ACR ++ I L + +M L+R + D P
Sbjct: 602 CASIACRAAIKINMRLDLAKMEWLLRALAATDCP 635
>gi|403386460|ref|ZP_10928517.1| hypothetical protein CJC12_01112 [Clostridium sp. JC122]
Length = 640
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 91/179 (50%), Gaps = 19/179 (10%)
Query: 207 SMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTT---LIKSQKLVVPQ 263
S F ++I+GQFN +I+ + + +L +IDQHA EKY FE +K+ + SQ L+ P
Sbjct: 447 SKFPPIRIIGQFNNTYIVGECNKELILIDQHAAHEKYLFEKYKKSIENLSVVSQLLITPI 506
Query: 264 NLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFM 323
L L+ ++N VF K G F+ + + + + +PM LG+ D + L +
Sbjct: 507 ILELSFDEYPYYEENREVFIKAG--FNIEEFGNNTISIREVPM----FLGKPDFKTLFYD 560
Query: 324 L------QHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+ T +T + ++I A+ AC+ +V L++ EM L+ ++ +D P+
Sbjct: 561 ILDDLKNMGTGNTVDIKYNKI----ATLACKAAVKANDKLTIKEMEKLLEDLRYMDDPF 615
>gi|67599551|ref|XP_666295.1| DNA mismatch repair protein, C-terminal domain [Cryptosporidium
hominis TU502]
gi|54657263|gb|EAL36066.1| DNA mismatch repair protein, C-terminal domain [Cryptosporidium
hominis]
Length = 363
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 79/158 (50%), Gaps = 28/158 (17%)
Query: 192 KNKEAESELNRVI--KKSMFEKMKIVGQFNLGFIIVKYDSD------------------- 230
KN E + NR KK +F +++++GQFN GFI+ K
Sbjct: 109 KNTENDQNSNRCFNFKKHLFNQLQVIGQFNKGFILTKLSIKEEQNYINHKNNERNGKNMI 168
Query: 231 ----LFIIDQHATDEKYNFETLQK-TTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKN 285
+FIIDQHA+DEK FE L + I++QKL+ P ++ LT + ++ +F +N
Sbjct: 169 ESLHIFIIDQHASDEKARFEKLNSDLSNIQTQKLISPLSISLTPSQEQLVISYKDIFEQN 228
Query: 286 GFEFSFDSSDD--GNVLLTSLPMSKNTTLGREDIEELL 321
GF F F+S+ + + LT LP+ L + D +LL
Sbjct: 229 GFRFIFNSNSEIGSRIQLTQLPVILGIPLKQIDFLDLL 266
>gi|313900881|ref|ZP_07834371.1| DNA mismatch repair protein, C-terminal domain protein [Clostridium
sp. HGF2]
gi|312954301|gb|EFR35979.1| DNA mismatch repair protein, C-terminal domain protein [Clostridium
sp. HGF2]
Length = 695
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 89/407 (21%), Positives = 174/407 (42%), Gaps = 58/407 (14%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEK----LLLATVK-----------VHITD 59
+YP +++++ M VDVNV P K +I + EK LL T++ V+IT
Sbjct: 278 RYPIVVIDLLMDAQLVDVNVHPSKWEIRLSKEKQLEKLLYETIRKALQEQLEVPRVNITK 337
Query: 60 SYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSH--EAN 117
+ V+ + + E+D S E++ N + E PS D EA+
Sbjct: 338 E-TVKEKVEEQELQFTYERDDSISRLHEEV---NDSFIHPEKNEKPSLDMEELRRKIEAD 393
Query: 118 LQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARY--------- 168
+ E+ P P +T E++ ++ SY ++ + +K ++
Sbjct: 394 KNRRKESAAPIQP-KTKELLPEIREETASYEPEDSTSVKAVTEEADVKVQHEDTDKTEVL 452
Query: 169 --ARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEK----------MKIVG 216
A +A +E ++ + + ++SE KK+ E+ ++++G
Sbjct: 453 PAAHTGSEAHTEAIETDISSDAAVAYKEISQSEELVYEKKAEVEQPQPLNPSLPQLRVIG 512
Query: 217 QFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIK---SQKLVVPQNLHLTKINQC 273
QF+ +I+ + + L+IIDQHA E+Y++E ++K L +Q L++P + T I+
Sbjct: 513 QFHSCYILAEGEKGLYIIDQHAAQERYHYEIIRKQILDGNNDTQPLLLPITIEST-ISAV 571
Query: 274 ILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHC 333
D+L + + D + LP L +D+EE F+ + E
Sbjct: 572 SQADDLNALLEQ-LGIHLEVFGDHTFVCRQLP------LWMKDVEEEAFLCDMIDIWEKD 624
Query: 334 RPSRI----RAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+ + + A+ AC S+ R+L++ EM ++ ++ +QP+
Sbjct: 625 KEISLDKLRKHAIATMACHSSIRFNRSLTLDEMKRVIEDLAHCEQPF 671
>gi|291550403|emb|CBL26665.1| DNA mismatch repair protein MutL [Ruminococcus torques L2-14]
Length = 708
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 93/422 (22%), Positives = 184/422 (43%), Gaps = 51/422 (12%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K V + Y F H++PF +L+ +S ++VD+NV P K ++ ++ + TV + +
Sbjct: 266 KSVEDAYRDFVMQHKFPFAVLHFHLSGENVDINVHPTKMELRFSRQQEVYNTVFEAVHRT 325
Query: 61 YAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRS-------NSEEVEHETIPVPSEDNSNFS 113
+ + +E + + E+++++ + E+ + P ++N +
Sbjct: 326 LLEPELIQKAEVPDPVESNENMAERSERVKKTFTSASTKDKEDTGSPFLLRPRKENEKVT 385
Query: 114 HEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLS-------LDIIQDQLKA 166
+++S ETV+ D DE + R+ + +S+ ++ D +D++ A
Sbjct: 386 AAELIKESRETVKDDVQDEDYFIRKMKERVLSYHNRSSSAEVADRKEIFRADEQKDKI-A 444
Query: 167 RYARRTVQAQDRCVENRFHANIDPSKNK-------------------EAESELNRVIKKS 207
+ + V+A D+ V A + SK +A+SE +
Sbjct: 445 EHVKYAVEAADKTVAPETAATVQKSKPAIEMQTATTSTDAASDCEITDAKSEPENGTQMD 504
Query: 208 MFEK----------MKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFE-TLQ--KTTLI 254
+FE+ K++GQ + +V++ +L+IIDQHA E+ +E TL+ K+
Sbjct: 505 LFEENFLKRDIRAEYKLIGQVFDTYWLVEFKDNLYIIDQHAAHERVLYERTLREMKSREF 564
Query: 255 KSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGR 314
SQ L P L L+ +L +N+ F + GFE ++ V ++P + + +
Sbjct: 565 TSQYLSPPIILSLSMQEAQLLNENMDRFSRIGFEIEPFGGEEYAV--RAVPDNLFSIAKK 622
Query: 315 EDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQ 374
E + E++ L ST P I AS +C+ +V LS E+ L+ + +D
Sbjct: 623 ELLMEMIDDLTEGLSTSMT-PELIDEKVASLSCKAAVKGNNRLSAQEVDKLIGELLTLDN 681
Query: 375 PW 376
P+
Sbjct: 682 PY 683
>gi|269118665|ref|YP_003306842.1| DNA mismatch repair protein MutL [Sebaldella termitidis ATCC 33386]
gi|268612543|gb|ACZ06911.1| DNA mismatch repair protein MutL [Sebaldella termitidis ATCC 33386]
Length = 621
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 165/375 (44%), Gaps = 50/375 (13%)
Query: 8 YHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTV 67
Y + +YPF ++ + +DVNV P K+ + ++K++ +K + D +
Sbjct: 263 YTKLMKGKYPFAVIFLNTDPKEIDVNVHPSKKIVKFSNDKIIYTQIKSAMDDYFY----- 317
Query: 68 DGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETI----PVPSEDNSNFSHEANLQQSPE 123
+ + E P+ D+ + + S +E + E + + E+ FS E
Sbjct: 318 ----LEERREWQPNIDLLKQNVNISAAEPEKIENLFSDETLKGENKQFFSLET------- 366
Query: 124 TVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENR 183
D D +ID+ P+ + P D I++ +K Y ++++ V
Sbjct: 367 ---LDNRDVETRIIDERPKKAIETLITEPE--DSDFIRENIKTDYPSYKEESKENNV--- 418
Query: 184 FHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQ-FNLGFIIVKYDSDLFIIDQHATDEK 242
S++ + SE N IKK E KI+GQ FN+ +I+V+ + L I DQH E+
Sbjct: 419 -------SESIQKSSEEN--IKKP--EDYKIIGQIFNM-YILVENKNQLEIYDQHIIHER 466
Query: 243 YNFETLQKTTLIKS---QKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNV 299
+E L++ K Q L++PQ + LT ++ ++ +N+ VF F F D + +
Sbjct: 467 ILYEELKEKFYSKKLDFQNLIIPQKIELTSPDKNLVMENIEVF--RDFGFDVDEFGENEI 524
Query: 300 LLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSV 359
+L S+P + +LL L++ + R I +M +C+ ++ G+ L
Sbjct: 525 ILRSVPAFDFRDSIKNVFMDLLADLKNDIEVKDLRERIIISM----SCKGAIKAGQKLDP 580
Query: 360 GEMTGLVRNMGRIDQ 374
E++ +R + I +
Sbjct: 581 DEISSFIRRLHEIGK 595
>gi|170761162|ref|YP_001787120.1| DNA mismatch repair protein [Clostridium botulinum A3 str. Loch
Maree]
gi|238688735|sp|B1KSA2.1|MUTL_CLOBM RecName: Full=DNA mismatch repair protein MutL
gi|169408151|gb|ACA56562.1| DNA mismatch repair protein MutL [Clostridium botulinum A3 str.
Loch Maree]
Length = 666
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 92/389 (23%), Positives = 175/389 (44%), Gaps = 52/389 (13%)
Query: 14 HQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATV--KVH--ITDSYAIGFTVDG 69
+ YPF ++ I++ + +DVNV P K ++ E+ + T+ VH I FT
Sbjct: 279 NSYPFFVIFIDIFPEYIDVNVHPTKSEVKFKDERAMFKTIFDAVHEAIKGELKESFT--- 335
Query: 70 NNMNQSMEQDPSSDVDMEKIQRSNSEEV--EHETIPVPSEDNSN-----FSHEANLQQSP 122
N N+ D+++ ++S +E + E E + +P + NSN F + N +
Sbjct: 336 NFFNKE-------DINIYDSEKSIAETIKLEKEEVQIPIDLNSNNKIDIFGNNINKLPTN 388
Query: 123 ETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLD-IIQDQLKARYAR------RTVQA 175
V + + ++++ S + T D + K Y++ + +
Sbjct: 389 TEVLKNIGIKEKNILENNDNFYTSKQNEIYYTNKNDEYLNSCNKDDYSKIEKPLQKGNKN 448
Query: 176 QDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIID 235
D N + N KE +S + + MKI+GQFN +I+++ D +L+IID
Sbjct: 449 PDALYLNEHNTNSSSINIKENKSN-------NFYVDMKIIGQFNNTYILIEKDKELYIID 501
Query: 236 QHATDEKYNFETLQ---KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFD 292
QHA EK FE + + + SQ L+ P + L++ I ++N +F +G F+ +
Sbjct: 502 QHAAHEKVLFEKFKSEIEKGYVISQILLSPVVIELSEDEFNIYEENKDIFKNSG--FAVE 559
Query: 293 SSDDGNVLLTSLPMSKNTTLGREDIEEL----LFMLQHTNSTEHCRPSRIRA-MFASRAC 347
+ + + + +P+ LG+ ++E L L+ L++ S E S I+ A+ AC
Sbjct: 560 NFGESTINIKEVPL----ILGKPNVENLFMDILYNLKNMKSKE---TSTIKYNAIATLAC 612
Query: 348 RKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+ +V L E+ L+ +M ++ P+
Sbjct: 613 KSAVKANDNLKEEEIKKLIEDMLILNNPY 641
>gi|402833045|ref|ZP_10881667.1| DNA mismatch repair protein, C-terminal domain protein [Selenomonas
sp. CM52]
gi|402281412|gb|EJU30047.1| DNA mismatch repair protein, C-terminal domain protein [Selenomonas
sp. CM52]
Length = 640
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 83/381 (21%), Positives = 161/381 (42%), Gaps = 36/381 (9%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K ++ YH +P ++LNI + + SVDVNV P K ++ + E + V + D+
Sbjct: 266 KAIDNAYHSLLPKSGFPMVVLNITVPQRSVDVNVHPQKSEMKFEDEGRIFKAVYKAVVDA 325
Query: 61 YAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQ 120
+ Q++E +S ++ ++R + E + + +F+ + +
Sbjct: 326 I--------RPVGQTLEDVAAS---VQNVERRYAMEPMQFVAAAQASEEEDFAGNGSAKT 374
Query: 121 SPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCV 180
S + P + M S+ ++ V ++ + A A V A V
Sbjct: 375 SFGIRYTENPYQAAPAQAAM-----SFAEAQSV------LKGEGAAYSAHDGVSADGGLV 423
Query: 181 ENRFHANIDPSKNKEAESELNRVIKKSMFEKMKI--VGQFNLGFIIVKYDSDLFIIDQHA 238
A P + + AE+ L V + ++ M I +GQ +L +II K L+I+DQHA
Sbjct: 424 REARDAAYKP-QGRAAETPLADVSEAGLY-PMNITPIGQVDLCYIIAKDKDGLYIVDQHA 481
Query: 239 TDEKYNFETLQKTT-LIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDG 297
E+ ++ I SQ+L+V L ++ +N +F + GF+ D
Sbjct: 482 AHERILYDKFSAMAERIPSQQLLVHPILSFDAREAALVSENQELFRRLGFDMEACGERDF 541
Query: 298 NV--LLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGR 355
+ + +P+S+ + RE + L M H + + R A A+ ACR ++ G
Sbjct: 542 RLKEVPADVPVSEAEDMVREILARLYDM--HETTAQEIR----HACLATMACRAAIKSGD 595
Query: 356 ALSVGEMTGLVRNMGRIDQPW 376
L+ +M ++ + + +P+
Sbjct: 596 ELNFRQMQIVLEELSQTARPY 616
>gi|448728944|ref|ZP_21711264.1| DNA mismatch repair protein MutL [Halococcus saccharolyticus DSM
5350]
gi|445795992|gb|EMA46509.1| DNA mismatch repair protein MutL [Halococcus saccharolyticus DSM
5350]
Length = 554
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 81/182 (44%), Gaps = 8/182 (4%)
Query: 197 ESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIK- 255
+S L +S F+ + ++GQF +++ + D DL ++DQHA E+ NFE L++
Sbjct: 352 DSSLGEPAGESAFDTISVIGQFRGLYLLCEADDDLLVVDQHAAHERINFERLREALDDGI 411
Query: 256 SQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGRE 315
S + P L LT +++ N GF +D G T LP
Sbjct: 412 SSVGIEPTPLSLTAAEAALVEANADALDALGFRI---ETDGGAYRATGLPAPLGRVAEPS 468
Query: 316 DIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQP 375
+ ++L + E+ R ++ + AC S+ G +LS + T LV +G +QP
Sbjct: 469 AVHDVLDGFLAGDEPENPREELLKDV----ACHPSLKAGESLSSEDATRLVERLGTCEQP 524
Query: 376 WV 377
+
Sbjct: 525 FA 526
>gi|153938478|ref|YP_001391054.1| DNA mismatch repair protein [Clostridium botulinum F str.
Langeland]
gi|384462087|ref|YP_005674682.1| DNA mismatch repair protein MutL [Clostridium botulinum F str.
230613]
gi|166232085|sp|A7GE44.1|MUTL_CLOBL RecName: Full=DNA mismatch repair protein MutL
gi|152934374|gb|ABS39872.1| DNA mismatch repair protein MutL [Clostridium botulinum F str.
Langeland]
gi|295319104|gb|ADF99481.1| DNA mismatch repair protein MutL [Clostridium botulinum F str.
230613]
Length = 666
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 97/401 (24%), Positives = 182/401 (45%), Gaps = 76/401 (18%)
Query: 14 HQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATV--KVH--ITDSYAIGFTVDG 69
+ YPF ++ I++ + +DVNV P K ++ E+ + T+ VH I FT
Sbjct: 279 NSYPFFVIFIDIFPEYIDVNVHPTKSEVKFKDERAMFKTIFDAVHGAIKGELKESFT--- 335
Query: 70 NNMNQSMEQDPSSDVDMEKIQRSNSE--EVEHETIPVPSEDNSN-----FSHEAN-LQQS 121
N N+ D+++ ++S +E ++E E + +P + NSN F + N L +
Sbjct: 336 NFFNKE-------DINIYDSEKSITEPIKLEKEEVQIPIDLNSNNKIDIFGNNINKLSNN 388
Query: 122 PETVEPDTPDE--TIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRC 179
E ++ E T+E +D Q + YA + + + C
Sbjct: 389 TELLKNIGIKEKNTLENNNDF------------------YTSKQNEIYYANKNDECLNSC 430
Query: 180 VENRFHANIDPSKNKEAE--------------SELNRVIKK--SMFEKMKIVGQFNLGFI 223
++ + + I+ S K+ + S +N K + + MKI+GQFN +I
Sbjct: 431 NKDNY-SKIEKSLQKDNKNPDTLYLNEHNTNSSSINIKENKPNNFYVDMKIIGQFNNTYI 489
Query: 224 IVKYDSDLFIIDQHATDEKYNFETLQ---KTTLIKSQKLVVPQNLHLTKINQCILKDNLP 280
+++ D +L+IIDQHA EK FE + + + SQ L+ P + L++ I ++N
Sbjct: 490 LIEKDKELYIIDQHAAHEKVLFEKFKSEIENRYVISQILLSPVVIELSEDEFNIYEENKD 549
Query: 281 VFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEEL----LFMLQHTNSTEHCRPS 336
+F +G FS ++ + + + +P+ LG+ ++E L L+ L++ S E S
Sbjct: 550 IFKNSG--FSVETFGEYTINIKEVPL----ILGKPNVENLFMDILYNLKNMKSKE---TS 600
Query: 337 RIRA-MFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
I+ A+ AC+ +V L E+ L+ +M ++ P+
Sbjct: 601 TIKYNAIATLACKSAVKANDNLKEEEIKKLIEDMLILNNPY 641
>gi|28210986|ref|NP_781930.1| DNA mismatch repair protein [Clostridium tetani E88]
gi|81841224|sp|Q895H3.1|MUTL_CLOTE RecName: Full=DNA mismatch repair protein MutL
gi|28203425|gb|AAO35867.1| DNA mismatch repair protein mutL [Clostridium tetani E88]
Length = 620
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 157/382 (41%), Gaps = 84/382 (21%)
Query: 14 HQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATV--KVHITDSYAIGFTVDGNN 71
+++PF ++ I++ + +DVNV P K +I +K++ + V VH
Sbjct: 279 NKFPFFVIFIDIFPEYIDVNVHPTKTEIKFKEDKIVFSFVFKTVH--------------- 323
Query: 72 MNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPD 131
E I++S +E E ++ D +
Sbjct: 324 ---------------ESIKKSLYKEFN------------------------EQIKEDVKE 344
Query: 132 ETIEVIDDMPRL-QGSYRQSTPVTL---SLDIIQDQLKARYARRTVQAQDRCVENRFHAN 187
+ E+I + P L Q + P+ L S+DI + L + ++ V++ + N
Sbjct: 345 DNKEIIKENPSLFQNVEKVQIPIDLKSASMDIERKSL----VNSVLCNENNIVKDNINKN 400
Query: 188 ID-PSKNKEAESELNRVIKK------SMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATD 240
I +K +E++L ++K+ S MKI+GQF+ +I+ + +L+IIDQHA
Sbjct: 401 IYIDTKENLSENKLKNILKENTEDMVSKLPDMKIIGQFDNTYILAESVKNLYIIDQHAAH 460
Query: 241 EKYNFETLQ---KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDG 297
EK FET + K +KSQ L+ P L L + DN +FYK GF +
Sbjct: 461 EKILFETYRDKIKKDEVKSQLLLQPIVLELDSEDFSYYVDNKELFYKTGFNIEVFGENTI 520
Query: 298 NVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMF---ASRACRKSVMIG 354
N+ +P +G+ DI LFM N I + A AC+ +V
Sbjct: 521 NI--REVPF----IMGKPDINN-LFMDIINNIKAMGSGETIEVKYDSIAMLACKSAVKAH 573
Query: 355 RALSVGEMTGLVRNMGRIDQPW 376
LS EM L+ ++ P+
Sbjct: 574 DKLSKEEMEALINDLRFAKDPF 595
>gi|304438412|ref|ZP_07398352.1| DNA mismatch repair protein MutL [Selenomonas sp. oral taxon 149
str. 67H29BP]
gi|304368495|gb|EFM22180.1| DNA mismatch repair protein MutL [Selenomonas sp. oral taxon 149
str. 67H29BP]
Length = 622
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 86/374 (22%), Positives = 152/374 (40%), Gaps = 60/374 (16%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K ++ VY +P ++ I + + ++DVNV P K ++ + E + V + D+
Sbjct: 268 KAIDNVYRSLVPKMGFPLAVIVITVPQRTIDVNVHPQKTEMKFEDEGRIFKAVYKAVLDA 327
Query: 61 YAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIP--VPSEDNSNFSHEANL 118
G + + ++E+ +E +P V + S S A
Sbjct: 328 IR-GAAGETTGIAAAVEK----------------PRFHYEAVPLDVSTPSASPVSAPARG 370
Query: 119 QQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDR 178
+P T P T E + Q + L QD ++ +AQ+R
Sbjct: 371 YAAP-TPHPQTVHEAV--------------QWAGARVDLRTAQDAVQ------EARAQER 409
Query: 179 CVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHA 238
+ PS + A+ + SM E+M +GQ +L +II + + L+IIDQHA
Sbjct: 410 AAFSDV-----PSAPRAAQGD-----DISMEERMLPIGQVDLTYIIAQSTATLYIIDQHA 459
Query: 239 TDEKYNFETLQ-KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDG 297
E+ F+ +T I SQ+++V L +++N +F + GF +++ +
Sbjct: 460 AHERILFDRFSAQTDGIPSQQMLVHAILSFDAHEAQYIEENAELFDRLGFH--LEAAGER 517
Query: 298 NVLLTSLPMSKNTTLGREDIEELLFMLQ--HTNSTEHCRPSRIRAMFASRACRKSVMIGR 355
LT P T I E+L L HT + + R + I M ACR ++ G
Sbjct: 518 TYRLTETPADVPTKEAEGIIREILASLGDLHTATPANLREAGIATM----ACRAAIKAGE 573
Query: 356 ALSVGEMTGLVRNM 369
LS+ +M L+ +
Sbjct: 574 ELSIRQMEILLEEL 587
>gi|319892318|ref|YP_004149193.1| DNA mismatch repair protein MutL [Staphylococcus pseudintermedius
HKU10-03]
gi|317162014|gb|ADV05557.1| DNA mismatch repair protein MutL [Staphylococcus pseudintermedius
HKU10-03]
Length = 646
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 166/387 (42%), Gaps = 42/387 (10%)
Query: 2 KLVNEVYHQFNN-HQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K V E YH +YP + LNIEM VDVNV P K ++ + E L + I ++
Sbjct: 265 KAVQEGYHTLMMIGRYPIVYLNIEMDPVLVDVNVHPTKLEVRLSKEDQLFDLIVAKIREA 324
Query: 61 YAIGFTVDGNNMNQSMEQDPSSD-VDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQ 119
+ + N++ E D + +K+ ++ + +T S N + +
Sbjct: 325 FKDQLLIPKNDLKSKYEPKKVLDQFEQQKMAFDQTQAAQTQT----SHSNKEMTIDEEPA 380
Query: 120 QSPETVEPD----TPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQA 175
+ EP TP T E DD Q + ++ D ++A V +
Sbjct: 381 PYTDVTEPSDTAKTP-TTSETNDDYAERQRA------------LLNDMVEAPSPINEVNS 427
Query: 176 QDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIID 235
D + + I + + ++ RV M++VGQ + +II + D +++ID
Sbjct: 428 TDDSSDGATVSEIQQNHPQPSDKPKRRV------PYMEVVGQVHGTYIIAQNDEGMYLID 481
Query: 236 QHATDEKYNFETLQ-KTTLI--KSQKLVVPQNLHLTKINQCILKDNLPVFYKNG-FEFSF 291
QHA E+ +E + K + ++Q L++P + TK Q I++ +L + G F F
Sbjct: 482 QHAAQERIKYEYYRDKIGEVNNENQSLLIPLTFNFTKDEQLIIEQHLDPLREAGIFLEPF 541
Query: 292 DSSDDGNVLLTSLPMSKNTTLGREDIEELLF-MLQHTNSTEHCRPSRIRAMFA-SRACRK 349
D ++ S P+ +E++EE++ M+++ + ++ R A +C++
Sbjct: 542 GGHD---YIVDSYPV----WFPQENVEEMIKDMIEYVIRHKKVDIAKFREEAAIMMSCKR 594
Query: 350 SVMIGRALSVGEMTGLVRNMGRIDQPW 376
S+ L EM L+ +G ++ P+
Sbjct: 595 SIKANHYLKPNEMADLIDQLGEMEDPF 621
>gi|386319413|ref|YP_006015576.1| DNA mismatch repair protein MutL [Staphylococcus pseudintermedius
ED99]
gi|323464584|gb|ADX76737.1| DNA mismatch repair protein MutL [Staphylococcus pseudintermedius
ED99]
Length = 646
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 172/394 (43%), Gaps = 56/394 (14%)
Query: 2 KLVNEVYHQFNN-HQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K V E YH +YP + LNIEM VDVNV P K ++ + E L + I ++
Sbjct: 265 KAVQEGYHTLMMIGRYPIVYLNIEMDPVLVDVNVHPTKLEVRLSKEDQLFDLIVAKIREA 324
Query: 61 YAIGFTVDGNN----------MNQSMEQDPSSD-VDMEKIQRSNS-EEVEHETIPVPSED 108
+ + N+ +NQ +Q + D + + Q S+S +E+ + P P D
Sbjct: 325 FKDQLLIPKNDLKSKYEPKKVLNQFEQQKMAFDQIQAAQTQTSHSNKEMTIDEEPAPYTD 384
Query: 109 NSNFSHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARY 168
+ S A ++P T E + DD Q + ++ D ++A
Sbjct: 385 VTEPSDTA---KTPTTSETN---------DDYAERQRA------------LLNDMVEAPS 420
Query: 169 ARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYD 228
V + D + + I + + ++ RV M++VGQ + +II + D
Sbjct: 421 PINEVNSTDDSSDGATVSEIQQNHPQPSDKPKRRV------PYMEVVGQVHGTYIIAQND 474
Query: 229 SDLFIIDQHATDEKYNFETLQ-KTTLI--KSQKLVVPQNLHLTKINQCILKDNLPVFYKN 285
+++IDQHA E+ +E + K + ++Q L++P + TK Q I++ +L +
Sbjct: 475 EGMYLIDQHAAQERIKYEYYRDKIGEVNNENQSLLIPLTFNFTKDEQLIIEQHLDPLREA 534
Query: 286 G-FEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLF-MLQHTNSTEHCRPSRIRAMFA 343
G F F D ++ S P+ +E++EE++ M+++ + ++ R A
Sbjct: 535 GIFLEPFGGHD---YIVDSYPV----WFPQENVEEMIKDMIEYVIRHKKVDIAKFREEAA 587
Query: 344 -SRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+C++S+ L EM L+ +G ++ P+
Sbjct: 588 IMMSCKRSIKANHYLKPNEMADLIDQLGEMEDPF 621
>gi|238019354|ref|ZP_04599780.1| hypothetical protein VEIDISOL_01218 [Veillonella dispar ATCC 17748]
gi|237864053|gb|EEP65343.1| hypothetical protein VEIDISOL_01218 [Veillonella dispar ATCC 17748]
Length = 673
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 93/417 (22%), Positives = 169/417 (40%), Gaps = 71/417 (17%)
Query: 1 MKLVNEVYHQF---NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHI 57
MK ++ YH N H P ++LNI + + VD+NV P K ++ +K++ V I
Sbjct: 265 MKAIDNAYHALLPKNGH--PLVVLNITVPAEMVDINVHPRKSEVKFSDDKIIFKAVYHGI 322
Query: 58 ---------------TDSYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETI 102
+ SY G +G + N + S+ NS + T
Sbjct: 323 LNALNNPLHERYERESSSYMSGIVTNGVDFNSNNRDRDSN---SSSSSAGNSTYDSYRTP 379
Query: 103 PVPSEDNSNFSHEANL-----------QQSPETVEPDTPDETIEVIDDM-------PRLQ 144
V ++ + H A + E + ET + ++++ P +
Sbjct: 380 SVVEDEMQSAEHIATAVDFDKVFGGRRTKGYEVMR----SETAQFVENLKTKGYTPPAPK 435
Query: 145 GSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVI 204
+Y QS+ S D + + + Y + V+ RF A + E R I
Sbjct: 436 ATYEQSSFTDESFDAVPTEYTS-YTKEDVE--------RFKALAHDIREDNTE---ERTI 483
Query: 205 KKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTT-LIKSQKLVVPQ 263
+ S F M GQ +I+ K DL+IIDQHA E+ ++ L K++ I Q ++VPQ
Sbjct: 484 QNSGFLPM---GQVASCYILAKKGDDLYIIDQHAAHERVRYDKLCKSSEAIPMQSILVPQ 540
Query: 264 NLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFM 323
T ++++ + GF+ + L P+ + E I + +F
Sbjct: 541 YSEATDDEMNLVEEEREILLDLGFDIELGGPT--KIKLVGAPVDLVESKAFE-ILQYVFS 597
Query: 324 LQHTNSTEHCRPSRIR---AMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPWV 377
H +H +P++ + M A +CR ++ G L++ +MT L+ ++ ++P+V
Sbjct: 598 YLH----DHQQPTKAQLRHEMLAYASCRGAIKAGHNLNMYQMTTLIEDLFSTEKPYV 650
>gi|309775010|ref|ZP_07670025.1| DNA mismatch repair protein HexB [Erysipelotrichaceae bacterium
3_1_53]
gi|308917228|gb|EFP62953.1| DNA mismatch repair protein HexB [Erysipelotrichaceae bacterium
3_1_53]
Length = 708
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 95/432 (21%), Positives = 176/432 (40%), Gaps = 95/432 (21%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEK----LLLATVK-----------VHIT- 58
+YP +++++ M VDVNV P K +I + EK LL T++ V+IT
Sbjct: 278 RYPIVVIDLIMDAQLVDVNVHPSKWEIRLSKEKQLEKLLYETIRKALQEQLEVPSVNITK 337
Query: 59 -------DSYAIGFTVDG-----------NNMNQSMEQDPSSDVDMEKIQ---------- 90
+ + FT + NN E+ +DME+++
Sbjct: 338 ETVKEKVEEQELQFTYERDDNIKKLHEEVNNSFTHPEKIEKPALDMEELRKQIAIDRTQK 397
Query: 91 -----------RSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTP----DETIE 135
R EV+ ETIP P E+ S A+ + S E D+P D +E
Sbjct: 398 KEVNIPVQPMTREIVSEVQEETIPYPEEEKSLSQIVADKEVSIEEKAVDSPTNSLDSGLE 457
Query: 136 VIDDMPRLQGSYRQ-STPVTLSLD---IIQDQLKARYARRTVQAQDRCVENRFHANIDPS 191
+ P Q P+ L+ ++ + ++T + Q + H ++PS
Sbjct: 458 KTTEAPISHSDAGQDEEPLREKLEKDPAENTEIAFKEIKQTQELQYEKTAQKPHQPLNPS 517
Query: 192 KNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKT 251
+++++GQF+ +I+ + + L+IIDQHA E+Y++E ++
Sbjct: 518 -----------------LPQLRVIGQFHNCYILAEGEKGLYIIDQHAAQERYHYEIIRNQ 560
Query: 252 TL---IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSK 308
L +Q L++P + T +++ + + G + D + LP
Sbjct: 561 ILSGNTDTQPLLLPITIESTISAVSQVEELNGLLEQIGIH--LEVFGDHTFVCRQLP--- 615
Query: 309 NTTLGREDIEELLFMLQHTNSTEHCRPSRI----RAMFASRACRKSVMIGRALSVGEMTG 364
L +D+EE F+ + E + + + A+ AC S+ R+L++ EM
Sbjct: 616 ---LWMKDVEEEAFLCDMIDIWEKDKEISLDKLRKHAIATMACHSSIRFNRSLTLEEMKR 672
Query: 365 LVRNMGRIDQPW 376
+V ++GR +QP+
Sbjct: 673 VVDDLGRCEQPF 684
>gi|153954200|ref|YP_001394965.1| hypothetical protein CKL_1575 [Clostridium kluyveri DSM 555]
gi|219854808|ref|YP_002471930.1| hypothetical protein CKR_1465 [Clostridium kluyveri NBRC 12016]
gi|146347081|gb|EDK33617.1| MutL [Clostridium kluyveri DSM 555]
gi|219568532|dbj|BAH06516.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 609
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 109/234 (46%), Gaps = 18/234 (7%)
Query: 152 PVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEK 211
P+ L I + +K Y + Q+ + + ++ E LN +K+S K
Sbjct: 360 PIDLRSPIYESYIKEEYGNN--EKQEDNISFEYGNTLEGGNTAEENVRLNDSLKESKISK 417
Query: 212 M---KIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFE----TLQKTTLIKSQKLVVPQN 264
+ K++GQFN +II + S+L+IIDQHA EK FE ++K +I SQ L+
Sbjct: 418 LPPFKMIGQFNNTYIIAEAASNLYIIDQHAAHEKILFEKYKSNIEKKEVI-SQILITSVV 476
Query: 265 LHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLF-M 323
+ LT + +N VF K GF ++ NV +P+ LG+ DI+ L +
Sbjct: 477 MELTNDDYACYVENKDVFKKAGFNIELFGNNTINV--REVPV----ILGKPDIKNLFTDI 530
Query: 324 LQHTNSTEHCRPSRIRAM-FASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+ + + ++ + A+ ACR ++ LS EM L+ +G ++ P+
Sbjct: 531 IDNLKNMGSGDTVEVKYLSIATLACRAAIKAKHNLSQVEMEHLLHELGFLEDPF 584
>gi|91773654|ref|YP_566346.1| DNA mismatch repair protein MutL [Methanococcoides burtonii DSM
6242]
gi|91712669|gb|ABE52596.1| DNA mismatch repair protein MutL [Methanococcoides burtonii DSM
6242]
Length = 603
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 103/207 (49%), Gaps = 24/207 (11%)
Query: 184 FHANIDPSKNKEAESELNRVIKKS---------MFEKMKIVGQFNLGFIIVKYDSDLFII 234
+HA+ ++ + SE R++ K+ +K +IVGQ N +IIV+++ + I+
Sbjct: 382 YHASARDTEKRLKRSE--RILSKTEKNPDRVSTGLDKARIVGQVNELYIIVEFEGGIMIV 439
Query: 235 DQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSS 294
DQHA E+ +E ++ Q+L+ P L LT + +L + +P+ + GF S
Sbjct: 440 DQHAAHERVMYEQIRDGNSSGWQELITPVMLDLTSKEKVLLDEYIPLLEEMGFAISEFGP 499
Query: 295 DDGNVLLTSLPMSKNTTLGREDIEELLF-MLQHTNSTEHCRPSRIRAMFAS----RACRK 349
+ + ++TS+P + LG+ + EL+ ++ S+ + R MF S ACR
Sbjct: 500 N--SFVVTSIP----SLLGKLENTELIHDIIMDVLSSGKVK--RDTGMFDSLCKTMACRA 551
Query: 350 SVMIGRALSVGEMTGLVRNMGRIDQPW 376
++ G S+ +M L+R + + P+
Sbjct: 552 AIKAGAGCSMDQMENLLRQLDMAENPY 578
>gi|373453196|ref|ZP_09545092.1| DNA mismatch repair protein MutL [Eubacterium sp. 3_1_31]
gi|371964035|gb|EHO81573.1| DNA mismatch repair protein MutL [Eubacterium sp. 3_1_31]
Length = 692
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 106/213 (49%), Gaps = 24/213 (11%)
Query: 180 VENRFHANIDPSKNKEAESELNRVIKKSMFEK---------MKIVGQFNLGFIIVKYDSD 230
VE FH +++ SK + + ++ + + + K ++++GQF+ +II + +
Sbjct: 464 VEQAFHPHMETSKLEVPKKQVQTMEQSDLIHKKPRNPSLPQLRVIGQFHNCYIIAEGEKG 523
Query: 231 LFIIDQHATDEKYNFETLQKTTLIK---SQKLVVPQNLHLTKINQCILKDNLPVFYKNGF 287
L+IIDQHA E+Y++E ++++ L +Q L++P + + L+D V + G
Sbjct: 524 LYIIDQHAAQERYHYEVIRESILAGQNDAQPLLLPITIEASVSAIMQLEDLNKVMEQLGI 583
Query: 288 EFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAM----FA 343
+S + ++ LP + +D+EE F+ + E + + + A
Sbjct: 584 H--LESFGEKTLVCRELP------VWMKDVEEAAFLQDMIDIWERDKALSLEKLRKHAIA 635
Query: 344 SRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+ AC S+ R+L++ EM ++ ++G+ +QP+
Sbjct: 636 TMACHSSIRFNRSLTMEEMNRVIEDLGKCEQPF 668
>gi|238927478|ref|ZP_04659238.1| DNA mismatch repair protein MutL [Selenomonas flueggei ATCC 43531]
gi|238884760|gb|EEQ48398.1| DNA mismatch repair protein MutL [Selenomonas flueggei ATCC 43531]
Length = 622
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 150/367 (40%), Gaps = 60/367 (16%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K ++ VY +P ++ I + + ++DVNV P K ++ + E + V + D+
Sbjct: 268 KAIDNVYRSLVPKMGFPLAVIVITVPQRTIDVNVHPQKTEMKFEDEGRIFKAVYKAVLDA 327
Query: 61 YAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIP--VPSEDNSNFSHEANL 118
G + + ++E+ + +E +P V + S S A
Sbjct: 328 IR-GAAGETTGIAAAVEK----------------PKFHYEAVPLDVSTLSASPVSAPARG 370
Query: 119 QQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDR 178
+P P P E + Q + L QD ++ V+AQ+R
Sbjct: 371 YAAP----PPHPQTVHEAV-----------QWAGARVDLRTAQDAVQ------EVRAQER 409
Query: 179 CVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHA 238
+ PS + A+ + SM E+M +GQ +L +II + + L+IIDQHA
Sbjct: 410 AAFSDV-----PSAPRAAQGD-----DISMEERMLPIGQVDLTYIIAQSTATLYIIDQHA 459
Query: 239 TDEKYNFETLQ-KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDG 297
E+ F+ +T I SQ+++V L +++N +F + GF +++ +
Sbjct: 460 AHERILFDRFSAQTDGIPSQQMLVHAILSFDAHEAQYIEENAELFDRLGFH--LEAAGER 517
Query: 298 NVLLTSLPMSKNTTLGREDIEELLFMLQ--HTNSTEHCRPSRIRAMFASRACRKSVMIGR 355
LT P T I E+L L HT + + R + I M ACR ++ G
Sbjct: 518 TYRLTETPADVPTEEAEGIIREILASLGDLHTATPANLREAGIATM----ACRAAIKAGE 573
Query: 356 ALSVGEM 362
LS+ +M
Sbjct: 574 ELSIRQM 580
>gi|293400025|ref|ZP_06644171.1| DNA mismatch repair protein HexB [Erysipelotrichaceae bacterium
5_2_54FAA]
gi|291306425|gb|EFE47668.1| DNA mismatch repair protein HexB [Erysipelotrichaceae bacterium
5_2_54FAA]
Length = 692
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 106/213 (49%), Gaps = 24/213 (11%)
Query: 180 VENRFHANIDPSKNKEAESELNRVIKKSMFEK---------MKIVGQFNLGFIIVKYDSD 230
VE FH +++ SK + + ++ + + + K ++++GQF+ +II + +
Sbjct: 464 VEQAFHPHMETSKLEVPKKQVQTMEQSDLIHKKPRNPSLPQLRVIGQFHNCYIIAEGEKG 523
Query: 231 LFIIDQHATDEKYNFETLQKTTLIK---SQKLVVPQNLHLTKINQCILKDNLPVFYKNGF 287
L+IIDQHA E+Y++E ++++ L +Q L++P + + L+D V + G
Sbjct: 524 LYIIDQHAAQERYHYEVIRESILAGKNDAQPLLLPITIEASVSAIMQLEDLNKVMEQLGI 583
Query: 288 EFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAM----FA 343
+S + ++ LP + +D+EE F+ + E + + + A
Sbjct: 584 H--LESFGEKTLVCRELP------VWMKDVEEAAFLQDMIDIWERDKALSLEKLRKHAIA 635
Query: 344 SRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+ AC S+ R+L++ EM ++ ++G+ +QP+
Sbjct: 636 TMACHSSIRFNRSLTMEEMNRVIEDLGKCEQPF 668
>gi|153811375|ref|ZP_01964043.1| hypothetical protein RUMOBE_01767 [Ruminococcus obeum ATCC 29174]
gi|149832502|gb|EDM87586.1| DNA mismatch repair domain protein [Ruminococcus obeum ATCC 29174]
Length = 626
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 90/406 (22%), Positives = 178/406 (43%), Gaps = 38/406 (9%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEK----LLLATVKVH 56
K + Y F H++PF+ L +EM + +DVNV P KR++ E+ + TV+
Sbjct: 203 KAIENAYRGFLMQHKFPFVSLRMEMEGNDLDVNVHPAKREVRFAREQEVYDAVYDTVRAA 262
Query: 57 ITDSYAI-GFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPS-EDNSNFSH 114
+T I +VD +++ + E+ + E ++ EE+ PV S S+
Sbjct: 263 LTRREMIPKVSVDSSSVKEDKEEKVTRAAVPEPFEQKRREELYGAQKPVYSVVREPAASY 322
Query: 115 EANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLS---------LDIIQDQLK 165
+ E + T E + +D++ +L + RQ+ P + + + Q+K
Sbjct: 323 RPAFSKDEEEMFSGTLREN-QKLDEVKKL--TERQTVPESFQNSSKKTNTVPEKVDTQVK 379
Query: 166 ARYARRTVQAQDRCVENRFHA---NIDPSKNKEAESEL---------NRVIKKSMFEKMK 213
+ +++VQ ++ + A I + ++E E + +++ ++
Sbjct: 380 QKIVQKSVQDYEQDYVQKTEAEELKIQEAVSRETEKQTPPQQLELFEEKLLAPESRSRID 439
Query: 214 IVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL---IKSQKLVVPQNLHLTKI 270
++GQ + +V+++ + +IIDQHA EK +E + K I SQ L P + L+
Sbjct: 440 LIGQIFDTYWLVQFEDNFYIIDQHAAHEKVYYERMVKQFREHSIDSQYLNPPLIVALSMQ 499
Query: 271 NQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNST 330
+ +LK N+ F + GFE ++ ++++P + E E+L L NS
Sbjct: 500 EEEVLKANMNYFEQFGFE--IENFGGREYRISAVPSNLYGLTEEELFLEMLDNLASNNSK 557
Query: 331 EHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+ A A+ AC+ +V A+S E L+ + ++ P+
Sbjct: 558 DTL--DIFAARLATMACKAAVKGNHAMSQQEAEKLIDELLTLENPY 601
>gi|159899518|ref|YP_001545765.1| DNA mismatch repair protein MutL [Herpetosiphon aurantiacus DSM
785]
gi|159892557|gb|ABX05637.1| DNA mismatch repair protein MutL [Herpetosiphon aurantiacus DSM
785]
Length = 631
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 85/387 (21%), Positives = 158/387 (40%), Gaps = 66/387 (17%)
Query: 3 LVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
++ E YH ++P + LNIE+ ++VDVNV P K ++ ++ + + + ++
Sbjct: 271 MIEEAYHTLLMKGRHPIVALNIELEPEAVDVNVHPTKSEVKFRNQSHVYGALTKAVREAL 330
Query: 62 AIGFTV---DGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANL 118
A T+ G N+S+ + VE + P+ + S++A L
Sbjct: 331 AAQSTIRAWTGFGANESVNR-----------------RVELRS---PNGERRGSSNDAPL 370
Query: 119 -QQSPETVEPDT---PDETIEVIDDMPRLQGSYRQSTPVT-LSLDIIQDQLKARYARRTV 173
+P P PD+ + ++P + R TP T + + Q +A
Sbjct: 371 FDDAPAAPRPQVNNYPDDDFDSTVNLPPIAKQARFETPTTSQTSSFLPPQQQA------- 423
Query: 174 QAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFI 233
F PS E++L +++VGQ N +I+ + +++
Sbjct: 424 ----------FDPAYAPSMPAPGEAKL---------PMLRVVGQVNETYIVAESSDGMYL 464
Query: 234 IDQHATDEKYNFETL---QKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFS 290
+DQHA E+ +E L + I+ Q L++ Q + L +L +L + GFE
Sbjct: 465 VDQHAAHERVVYERLMAEHQDVPIERQTLMLAQPIELPPAVTRLLSAHLADLEQWGFE-- 522
Query: 291 FDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPS--RIRAMFASRACR 348
+ +G ++L ++P + L I L + S E S R M + AC
Sbjct: 523 AEEFGEGTLMLRAVP----SGLHVGQIATALMEIADHLSYEGGATSDDRREKMLTTIACH 578
Query: 349 KSVMIGRALSVGEMTGLVRNMGRIDQP 375
S+ G+ L+ EM L++ + R + P
Sbjct: 579 SSIRAGKTLTHEEMRQLLQQLERCEMP 605
>gi|374629541|ref|ZP_09701926.1| DNA mismatch repair protein MutL [Methanoplanus limicola DSM 2279]
gi|373907654|gb|EHQ35758.1| DNA mismatch repair protein MutL [Methanoplanus limicola DSM 2279]
Length = 705
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 100/412 (24%), Positives = 172/412 (41%), Gaps = 65/412 (15%)
Query: 14 HQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITD-------------- 59
++YP LN+ + R+ VDVNV P KR++ E + + ++ +++
Sbjct: 288 NRYPVAYLNLIIDRNIVDVNVHPTKREVRFSRETEIRSALRESVSEALKGESLIYKKNPS 347
Query: 60 --------SYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNS---EEV----EHETIPV 104
SY T D + + E SD D +K S EE+ E ET V
Sbjct: 348 VFSFENRTSYG---TKDNEKKHNNSESGKPSDQDFDKYGYFPSGMKEELNSAQEKETSGV 404
Query: 105 PSEDNSNFSHEANLQQSPETVEPDTPDETIEVIDD---MPRLQGSYRQSTPVTLSLDII- 160
S+ FS +Q P V D ++ D ++S+ V+ + I
Sbjct: 405 RSQKPDLFSSYLKKEQEPVYVR----DSSVVKSRDSGIFSSCTTEEQRSSAVSEAYGKII 460
Query: 161 ---QDQLKARYARRTVQAQDRCVENRFHANIDPSKN--KEAESELNRVIKKSMFEKMKIV 215
Q K+ +A + D+ + R+H + + E+ + +S F MKI
Sbjct: 461 SRDPGQKKSPFAGFIDTSPDK--DQRYHPKFSATDRQLRLTENFSYKYNGESRFPDMKIA 518
Query: 216 GQFNLGFIIV----KYDSDLFIIDQHATDEKYNFETLQ--KTTLIKSQKLVVPQNLHLTK 269
GQFN +I+ +L +IDQHA E+ ++ +Q K + SQ+L+VP L+L
Sbjct: 519 GQFNSSYIVAFMSGSEGEELVLIDQHAAHERIIYDQIQANKMSGKNSQELLVPVILNLRA 578
Query: 270 INQCILKDNLPVFYKNGF---EFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLF-MLQ 325
IL L + GF EF DS + S+P+ +G E I++++ ++
Sbjct: 579 SESMILISGLKELEEEGFKIEEFGRDS-----FAIRSVPLVLGKRIGTEIIKDIISDIMD 633
Query: 326 HTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPWV 377
ST R +I + +C+ ++ G LS +M LV+ + + P+
Sbjct: 634 DGTSTFEERKEKIASTV---SCKAAIKAGTELSFEQMKKLVKQLSATENPYT 682
>gi|209878770|ref|XP_002140826.1| DNA mismatch repair protein [Cryptosporidium muris RN66]
gi|209556432|gb|EEA06477.1| DNA mismatch repair protein, putative [Cryptosporidium muris RN66]
Length = 919
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 79/165 (47%), Gaps = 13/165 (7%)
Query: 168 YARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIK--KSMFEKMKIVGQFNLGFIIV 225
Y+ +Q + N+ H S NK LN+ + K +F +KIVGQFN GFI+
Sbjct: 616 YSESQIQNMNYITNNKTHK--GNSCNKSINKTLNKCFQFQKHLFNDLKIVGQFNKGFILA 673
Query: 226 KY------DSDLFIIDQHATDEKYNFETLQKTTL-IKSQKLVVPQNLHLTKINQCILKDN 278
LFIIDQHA DEK FE I++QKL+ P + LT +
Sbjct: 674 TLFQPEVSSFHLFIIDQHAADEKTKFEKYNNDLRNIQTQKLLSPLPMTLTPAQEQTALTY 733
Query: 279 LPVFYKNGFEFSF--DSSDDGNVLLTSLPMSKNTTLGREDIEELL 321
+F NGF++ F +S+ + LT +P+ + L + D +LL
Sbjct: 734 KDIFESNGFKYVFNTNSTIGKRIQLTQIPIIMGSPLQQFDFLDLL 778
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 36/57 (63%), Gaps = 6/57 (10%)
Query: 326 HTNSTEHC------RPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+T ST C RP R+ ++ AS+ACR++VM+G L++ +M+ ++ NM + PW
Sbjct: 845 NTKSTLWCPTNRLPRPQRLWSILASKACRRAVMVGDDLNLTQMSKIIYNMSTLKSPW 901
>gi|410726893|ref|ZP_11365124.1| DNA mismatch repair protein MutL [Clostridium sp. Maddingley
MBC34-26]
gi|410599868|gb|EKQ54407.1| DNA mismatch repair protein MutL [Clostridium sp. Maddingley
MBC34-26]
Length = 657
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 181/403 (44%), Gaps = 68/403 (16%)
Query: 4 VNEVYHQFNN-HQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATV--KVH---- 56
V + + F+ +++PF IL IE+ + VDVN+ P K ++ + E+ + + VH
Sbjct: 268 VEQAFKSFSTVNKFPFFILFIEVYPEHVDVNIHPTKAEVKFNDERTIFKKIFGAVHTALK 327
Query: 57 --ITDSYAIGFTVDGNNMN-QSMEQ---DPSSDVDMEKIQRSNSEEVEHETIPVPSEDNS 110
+ ++++I D + + S E+ + + K+ S ++ + + + + + NS
Sbjct: 328 NEVFETFSIKEEKDSKSASIPSFEEITFKIKEEEEKVKLASSAAKTLIDQGVDLKA--NS 385
Query: 111 NF-SHEANLQQSPETVEPD-------TPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQD 162
NF S+E S +++ D T DE+ + I D+P + ST ++D
Sbjct: 386 NFYSYEKTDDMSYSSIKEDDSGPLSGTTDESNKTIVDIPI---DLKSSTISEENID---- 438
Query: 163 QLKARYARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGF 222
+ ++ D +EN NI K F + I+GQ+N +
Sbjct: 439 -----FDNEGIEDADNDLENTNTINIKEPTPK--------------FPPITIIGQYNKTY 479
Query: 223 IIVKYDSDLFIIDQHATDEKYNFETLQK---TTLIKSQKLVVPQNLHLTKINQCILKDNL 279
I+ +++ L++IDQHA EK FE K I Q L+VP + L+ + ++N
Sbjct: 480 ILGEHEGTLYMIDQHAAHEKIIFEKYLKEIENGTIIIQPLMVPSIIDLSIDDYSYFEENK 539
Query: 280 PVFYKNGF---EFSFDSSDDGNVL-LTSLPMSKNTTLGREDIEELLF-MLQHTNSTEHCR 334
VF + GF EF GN L L +P LG+ + + L +L + + + +
Sbjct: 540 EVFKEAGFLLEEFG------GNSLSLKEVPY----FLGKLNPKSLFLDILDNLKNLGNGK 589
Query: 335 PSRIR-AMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
S ++ AS+AC+ ++ L + EM L+ ++ ID P+
Sbjct: 590 TSEVKHNAIASKACKAAIKGNDKLEINEMVKLIEDLRFIDDPF 632
>gi|110667417|ref|YP_657228.1| DNA mismatch repair protein MutL [Haloquadratum walsbyi DSM 16790]
gi|109625164|emb|CAJ51584.1| DNA mismatch repair protein MutL [Haloquadratum walsbyi DSM 16790]
Length = 772
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 11/173 (6%)
Query: 212 MKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKT--TLIKSQKLVVPQNLHLTK 269
++I+GQ + +II + D L +IDQHA DE+ N+E LQ T + +Q L P + LT
Sbjct: 571 LRILGQIDETYIIAESDDGLVLIDQHAADERINYEQLQATLAETVTTQALAEPVKIELTA 630
Query: 270 INQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLF-MLQHTN 328
+++ + GF + D N+++T++P + + L + ++L + N
Sbjct: 631 GESAQVEEYADALERVGFRVT--DGDGDNIVVTAVPAAFASALDPALVRDVLAETAESLN 688
Query: 329 STEHCRPSRIRAM----FASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPWV 377
S H R I+ + A AC S+ AL+ G L+ + + P+
Sbjct: 689 S--HDRSETIKTLTDDILADLACYPSLTGNTALTEGSTVNLLEQLDTCENPYA 739
>gi|317472766|ref|ZP_07932078.1| DNA mismatch repair protein MutL [Anaerostipes sp. 3_2_56FAA]
gi|316899758|gb|EFV21760.1| DNA mismatch repair protein MutL [Anaerostipes sp. 3_2_56FAA]
Length = 620
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 157/379 (41%), Gaps = 53/379 (13%)
Query: 2 KLVNEVYHQFN-NHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K + + Y F H+YPF+ LNIE+ + +DVNV P K +I +EK L + I ++
Sbjct: 266 KAIEDGYKTFTMAHKYPFVCLNIEVEPELLDVNVHPTKMEIRFRNEKELYELLASGIKET 325
Query: 61 YAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQ 120
+ E P +++ Q+ ++ V E +P P E E + ++
Sbjct: 326 LS------------HREMIPKAELGK---QKKEAKPVLPEKMPEPFEQVRR--EERHEEK 368
Query: 121 SPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCV 180
+ E P+ P QG TL ++ + K D
Sbjct: 369 AAEYTAPEIPAGP----------QG--------TLKKYAVKPEAKKSVFAGVNYRNDDGK 410
Query: 181 ENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATD 240
E+ ++ + + E++ +R K++GQ + +++Y+ LFI+DQHA
Sbjct: 411 EDLQQMTLNETSLLDEEAKPDR----------KVIGQLFKTYWLIEYEDQLFIMDQHAAH 460
Query: 241 EKYNFETLQKT---TLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDG 297
EK N+E L K+ I SQ + P + L+ +L++ +F + G F+ ++
Sbjct: 461 EKVNYEKLMKSFREKKIYSQGVEPPYVVTLSMAEAKVLEETKDIFQELG--FTIEAFGGN 518
Query: 298 NVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRAL 357
+ +P + +E ELL L T P I AS AC+ S + +
Sbjct: 519 EFCIRQVPANLYGLKEKELFMELLDSL--TADGVKKDPEMITDKIASMACKMSAKGNQRM 576
Query: 358 SVGEMTGLVRNMGRIDQPW 376
S+ E+ L+ + + P+
Sbjct: 577 SLPEVRNLLDLLMECENPY 595
>gi|385802844|ref|YP_005839244.1| DNA mismatch repair protein MutL [Haloquadratum walsbyi C23]
gi|339728336|emb|CCC39482.1| DNA mismatch repair protein MutL [Haloquadratum walsbyi C23]
Length = 772
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 11/173 (6%)
Query: 212 MKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKT--TLIKSQKLVVPQNLHLTK 269
++I+GQ + +II + D L +IDQHA DE+ N+E LQ T + +Q L P + LT
Sbjct: 571 LRILGQIDETYIIAESDDGLVLIDQHAADERINYEQLQATLAETVTTQALAEPVKIELTA 630
Query: 270 INQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLF-MLQHTN 328
+++ + GF + D N+++T++P + + L + ++L + N
Sbjct: 631 GESAQVEEYADALERVGFRVT--DGDGDNIVVTAVPAAFASALDPALVRDVLAETAESLN 688
Query: 329 STEHCRPSRIRAM----FASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPWV 377
S H R I+ + A AC S+ AL+ G L+ + + P+
Sbjct: 689 S--HDRSETIKTLTDDILADLACYPSLTGNTALTEGSTVNLLEQLDTCENPYA 739
>gi|58698260|ref|ZP_00373179.1| mismatch repair protein MutL [Wolbachia endosymbiont of Drosophila
ananassae]
gi|225631007|ref|YP_002727798.1| DNA mismatch repair protein MutL [Wolbachia sp. wRi]
gi|254766185|sp|C0R515.1|MUTL_WOLWR RecName: Full=DNA mismatch repair protein MutL
gi|58535232|gb|EAL59312.1| mismatch repair protein MutL [Wolbachia endosymbiont of Drosophila
ananassae]
gi|225592988|gb|ACN96007.1| DNA mismatch repair protein MutL [Wolbachia sp. wRi]
Length = 605
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 90/181 (49%), Gaps = 21/181 (11%)
Query: 203 VIKKSMFEKMKIVGQFNLGF---------IIVKYDSDLFIIDQHATDEKYNFETLQKTTL 253
V++K + E++ ++ LGF II + L I+DQHA E+ +E L++ +
Sbjct: 401 VLEKKVLEQVDLIESHPLGFARCQVYNTYIIAEVRDKLIIVDQHAAHERLVYECLKQKSS 460
Query: 254 IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFD--SSDDGNVLLTSLPMSKNTT 311
IK QKL++P+ + + NQ + + + ++ FE FD + V++ +P
Sbjct: 461 IKRQKLLLPETVEIK--NQAGM-EMIEIYKDKLFEMGFDIEIKSENKVIVKEIP----AI 513
Query: 312 LGREDIEELLF-MLQHTNSTEHCRP--SRIRAMFASRACRKSVMIGRALSVGEMTGLVRN 368
LG D++E+L ++ E P ++ + A+ AC S+ GR + + EM L+R
Sbjct: 514 LGAIDVKEMLINIIDRLTEIEDTLPVEDKVNKILATIACHGSIRAGRKMRLDEMNELLRQ 573
Query: 369 M 369
M
Sbjct: 574 M 574
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 4 VNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLL 49
V YH F + +YPF L++E+ D VDVNV P+K ++ ++KL+
Sbjct: 266 VRYAYHDFIPSDRYPFAALHLEIPYDQVDVNVHPNKSEVRFQNKKLI 312
>gi|357058860|ref|ZP_09119706.1| hypothetical protein HMPREF9334_01423 [Selenomonas infelix ATCC
43532]
gi|355373206|gb|EHG20527.1| hypothetical protein HMPREF9334_01423 [Selenomonas infelix ATCC
43532]
Length = 625
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 86/373 (23%), Positives = 156/373 (41%), Gaps = 69/373 (18%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K ++ VY +P +L IE+ + ++DVNV P K ++ + E + V + D+
Sbjct: 268 KAIDNVYRALVPKMGFPLAVLRIEVPQRTIDVNVHPQKTEMKFEDEGRIFKAVYKSVLDA 327
Query: 61 YAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIP----VPSEDNS---NFS 113
G + + S+E+ + +E +P VP++ N +
Sbjct: 328 IR-GAAGESTAIASSVEK----------------PKFHYEAVPLNVGVPADATPYTRNAA 370
Query: 114 HEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTV 173
AN P V P T E ++ +R + + L QD++ A V
Sbjct: 371 APANTYAMPP-VRPQTVHEAVQ-----------WRGQS---VDLRAAQDRVAA------V 409
Query: 174 QAQDRCV--ENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDL 231
++++R H+N++ + AE E N + +GQ +L +II + L
Sbjct: 410 RSEERAAFSATGSHSNVE----QGAEMEGN----------LLPIGQVDLTYIIAQSAQSL 455
Query: 232 FIIDQHATDEKYNFETLQ-KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFS 290
+I+DQHA E+ F+ + I SQ+++V L +++N +F + GF
Sbjct: 456 YIVDQHAAHERILFDRFSAQADGIPSQQMLVHAILSFDAREAQYIEENAELFDRLGFH-- 513
Query: 291 FDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIR-AMFASRACRK 349
+ + + LT P T + I E+L L ++ P+ +R A A+ ACR
Sbjct: 514 LEPAGEREYRLTEAPADIPTDEAEDTIREILMSLGDLHA---ATPANLRQAGLATMACRA 570
Query: 350 SVMIGRALSVGEM 362
++ G LSV +M
Sbjct: 571 AIKAGEELSVRQM 583
>gi|363899231|ref|ZP_09325741.1| hypothetical protein HMPREF9625_00401 [Oribacterium sp. ACB1]
gi|395209505|ref|ZP_10398599.1| DNA mismatch repair protein, C-terminal domain protein
[Oribacterium sp. ACB8]
gi|361959068|gb|EHL12364.1| hypothetical protein HMPREF9625_00401 [Oribacterium sp. ACB1]
gi|394705136|gb|EJF12665.1| DNA mismatch repair protein, C-terminal domain protein
[Oribacterium sp. ACB8]
Length = 702
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 88/399 (22%), Positives = 170/399 (42%), Gaps = 41/399 (10%)
Query: 14 HQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMN 73
H++PF IL ++++ VDVNV P K ++ + + V + + + +D N ++
Sbjct: 286 HKFPFAILFLDLTPSLVDVNVHPQKLEVRFQNRDSIYQAVFNSVNTTLSEANLIDENPLS 345
Query: 74 QSM-EQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETV------- 125
+ E+ ++ E + R SEE + E PETV
Sbjct: 346 VFLKEEKKKAEFQPELLLRKESEERAFRASEFSPLKEEHIESERKDIAYPETVFRQTEEK 405
Query: 126 -------EPDTP--DETIEVIDDMPRLQ-GSYRQST-------PVTLSLDIIQDQLKARY 168
+P P E ++ + +Q GSY Q TL D++ Q
Sbjct: 406 QGTGFSEKPSQPLRYEEFDLTKGLKSVQEGSYSQEKNSFASEKTFTLKEDVVSSQSSVLD 465
Query: 169 ARRTVQAQDRCVEN-----RFHANIDPSKNKEAESELNRV--IKKSMFEKMKIVGQFNLG 221
Q++ +N R H + + KE + L + + +I+G+
Sbjct: 466 KGFETAFQEKKRDNTPSPEREHLCNEAKETKEGQESLFTAPFLSEEARISHRIIGEVFQT 525
Query: 222 FIIVKYDSDLFIIDQHATDEKYNFETL---QKTTLIKSQKLVVPQNLHLTKINQCILKDN 278
+ +++Y + L+I+DQHA EK NFE + +K + SQ ++P ++HL+ + +L+
Sbjct: 526 YWLIEYGNSLYIMDQHAAHEKINFERMMRRKKEKEVFSQN-IIPLSIHLSTGEREVLEKY 584
Query: 279 LPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRI 338
F + G+ + +S+ + LT++P+ T E + E+L L T + I
Sbjct: 585 RKEFLEMGYLWVEESN---GISLTAIPVDFPTVRQEEVLLEILDGL--TEDSAILEGESI 639
Query: 339 RAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPWV 377
AS +C+ +V + +SV E +++ + ++D P+
Sbjct: 640 YNKIASMSCKAAVKGNQKISVAECDTILQELLQLDNPFA 678
>gi|336426863|ref|ZP_08606871.1| hypothetical protein HMPREF0994_02877 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336010503|gb|EGN40486.1| hypothetical protein HMPREF0994_02877 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 737
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 81/178 (45%), Gaps = 7/178 (3%)
Query: 202 RVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETL---QKTTLIKSQK 258
+++ K + +I+GQ + + +Y+ L IDQHA EK +E L KT + SQ
Sbjct: 539 KLLTKEAVQSFRILGQVFDTYWLAQYEDKLLFIDQHAAHEKVKYEALINKMKTGTVDSQM 598
Query: 259 LVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIE 318
L P L+L+ +L+ F + GFE D + S+P +E IE
Sbjct: 599 LTPPIVLNLSAREAHLLERYESYFAQMGFE--IDEFGGNAYTVRSVPCDLYGHYEKEFIE 656
Query: 319 ELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+L L+ H PS I AS AC+ +V +S EM L+ + +++ P+
Sbjct: 657 AILDELE--EEPPHGTPSVIAEKLASMACKSAVKGNHTMSFREMEALLDQLLKLENPY 712
>gi|158320585|ref|YP_001513092.1| DNA mismatch repair protein [Alkaliphilus oremlandii OhILAs]
gi|158140784|gb|ABW19096.1| DNA mismatch repair protein MutL [Alkaliphilus oremlandii OhILAs]
Length = 616
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 173/377 (45%), Gaps = 81/377 (21%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQI-FMDHEKLLLATVKVHITDSYAIGFTVDGNNMN 73
+YP ILN+++ +DVNV P K ++ F D EK+ +K AI ++ ++
Sbjct: 281 KYPICILNLKIHPSVLDVNVHPAKIEVKFEDEEKVYHFILK-------AILKALEKQSIV 333
Query: 74 QSM-EQDPSSDVDMEKIQRSNSEEVE--HETIPVPSEDNSNFSHEANLQQSPETVEPDTP 130
+M E P +++D ++ QR + VE E I V + ++ + ++Q++ E +
Sbjct: 334 PNMLELAPRTNIDKKQPQRQILKVVEEKQEDI-VIGKSLASIQDQMSVQETKENYSKNL- 391
Query: 131 DETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANIDP 190
D L+ TPV +I+++Q+ Q VE+ NI
Sbjct: 392 --------DFTSLK------TPV----EIVEEQI-----------QIASVEDH---NIVQ 419
Query: 191 SKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQ- 249
S S LN S+ ++ IVGQ +II++ + +++IDQHA E+ + T +
Sbjct: 420 S------SFLN-----SLLDRYHIVGQIFSTYIILENEGSMYLIDQHAAHERLLYNTFRQ 468
Query: 250 --KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMS 307
K + SQ+L+ P L L+K + L ++L +F K GFE +D +++ +PM
Sbjct: 469 EIKAEKVASQRLLAPMVLELSKEDYMFLLNHLYIFEKLGFEIENFGGND--IIIRQVPM- 525
Query: 308 KNTTLGRED----IEELLFMLQHTNSTEHCRPSRIRAMF----ASRACRKSVMIGRALSV 359
LGR I E+L ++ N + AMF A +AC++++ +
Sbjct: 526 ---ILGRPQNFSFIYEILDEVRKYND--------VNAMFEDTIAKKACKEAIKANDKMDS 574
Query: 360 GEMTGLVRNMGRIDQPW 376
E+ L+ ++ ++ P
Sbjct: 575 IEIRKLIEDLSKLTPPL 591
>gi|66358254|ref|XP_626305.1| PMS1'MutL family ATpase' [Cryptosporidium parvum Iowa II]
gi|46228008|gb|EAK88928.1| PMS1'MutL family ATpase' [Cryptosporidium parvum Iowa II]
Length = 971
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 79/158 (50%), Gaps = 28/158 (17%)
Query: 192 KNKEAESELNRVI--KKSMFEKMKIVGQFNLGFIIVKYDSD------------------- 230
K+ E + NR KK +F +++++GQFN GFI+ K
Sbjct: 712 KDTENDQSSNRCFNFKKHLFNQLQVIGQFNKGFILTKLSIKEEQNYINHKNNEKNGENMM 771
Query: 231 ----LFIIDQHATDEKYNFETLQK-TTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKN 285
+FIIDQHA+DEK FE L + I++QKL+ P ++ LT + ++ +F +N
Sbjct: 772 ESLHIFIIDQHASDEKARFEKLNSDLSNIQTQKLISPLSVSLTPSQEQLVISYKDIFEQN 831
Query: 286 GFEFSFDSSDD--GNVLLTSLPMSKNTTLGREDIEELL 321
GF F F+S+ + + LT LP+ L + D +LL
Sbjct: 832 GFRFIFNSNSEIGSRIQLTQLPVILGIPLKQIDFLDLL 869
Score = 37.7 bits (86), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 11 FNNHQ-YPFIILNIEMSRDSVDVNVTPDKRQIFMDH--EKLLLATVKVHITDSY 61
FNN + YP ++NI + + +D+NVTP+KR + + E +L ++ + DSY
Sbjct: 359 FNNRKLYPAFVINIHLPQSLLDINVTPNKRIVMLPAKVETVLAENIQQFLQDSY 412
>gi|330801903|ref|XP_003288962.1| hypothetical protein DICPUDRAFT_153264 [Dictyostelium purpureum]
gi|325080993|gb|EGC34526.1| hypothetical protein DICPUDRAFT_153264 [Dictyostelium purpureum]
Length = 1482
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 88/182 (48%), Gaps = 15/182 (8%)
Query: 203 VIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVP 262
+I + M + K + Q++ F++ + + + ++DQHA E+ ETL+K +++ + P
Sbjct: 1271 IIPREMLKDFKFITQWDKKFLVCEANGIVLVLDQHAVSERIKLETLEKKYFGENKFDLCP 1330
Query: 263 ----QNLHLTKINQCILKDNLPVFYKN----GFEFSFDSSDDGNVLLTSLPMSKNTTLGR 314
LT ++K ++ KN GFE+ S+ ++ + +PM LG
Sbjct: 1331 MPERSRWSLTAYELELMK----IYSKNLEDWGFEW---RSNPTSITILQVPMFCLVGLGV 1383
Query: 315 EDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQ 374
D+ E L++L++ + +P + AS+ACR ++ G L+ L+ ++ +
Sbjct: 1384 NDLREFLYLLENNKGSPSTKPPAAHRILASKACRTAIKFGHNLTKEVCIKLLEDLNECNI 1443
Query: 375 PW 376
P+
Sbjct: 1444 PF 1445
>gi|197117368|ref|YP_002137795.1| DNA mismatch repair protein [Geobacter bemidjiensis Bem]
gi|238690886|sp|B5EGD4.1|MUTL_GEOBB RecName: Full=DNA mismatch repair protein MutL
gi|197086728|gb|ACH37999.1| DNA mismatch repair protein MutL [Geobacter bemidjiensis Bem]
Length = 647
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 157/392 (40%), Gaps = 65/392 (16%)
Query: 6 EVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIG 64
+ Y F +YP + + IE++ VDVNV P K HE +VH D+
Sbjct: 270 QAYRNFLERGRYPVVAVFIEIAPGEVDVNVHPTK------HEVRFREQGRVH--DAIQ-- 319
Query: 65 FTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQ--QSP 122
N + +++ P ++R V P+E ++ + A L+ Q+P
Sbjct: 320 -----NAVESVLKETPW-------LKRPAVAAVSR-----PTEKDAA-AARAVLEGSQAP 361
Query: 123 ETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDII-----------QDQLKARYARR 171
V P P + +P Q +QS+ + + Q L+ +Y +
Sbjct: 362 LPVTPQ-PRPALTSEKPVPAPQAQPQQSSISEARVAEVRELLVDFQPRPQPSLRPQY-QG 419
Query: 172 TVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDL 231
+V +++ A + P + E + F + ++GQFN +I+ + +DL
Sbjct: 420 SVTSKEALPYAPMAAPV-PVREPETAAPEPDPAAAGYFSSLGVIGQFNASYILCQRGTDL 478
Query: 232 FIIDQHATDEKYNFETLQKTTL---IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFE 288
+IDQHA E+ FE L+ + SQ L+ P+ + + +L+++L + GFE
Sbjct: 479 VLIDQHAAHERVAFEKLKGQFAGREVDSQGLLFPETMEFSFRESAVLREHLAELARLGFE 538
Query: 289 FSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRA-------M 341
F+ LL +P + T + I ++L L SR RA +
Sbjct: 539 --FEEFGGNTWLLKGVPQVLSATRYVDTIRDILEELGSL--------SRSRAFSDIQEDL 588
Query: 342 FASRACRKSVMIGRALSVGEMTGLVRNMGRID 373
A AC V R LS E+T L + M D
Sbjct: 589 LARIACHSVVRGKRTLSQVEITALFKQMDETD 620
>gi|167745631|ref|ZP_02417758.1| hypothetical protein ANACAC_00323 [Anaerostipes caccae DSM 14662]
gi|167654943|gb|EDR99072.1| DNA mismatch repair domain protein [Anaerostipes caccae DSM 14662]
Length = 620
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 90/381 (23%), Positives = 159/381 (41%), Gaps = 57/381 (14%)
Query: 2 KLVNEVYHQFN-NHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K + + Y F H+YPF+ LNIE+ + +DVNV P K +I +EK L + I ++
Sbjct: 266 KAIEDGYKTFTMAHKYPFVCLNIEVEPELLDVNVHPTKMEIRFRNEKELYELLASGIKET 325
Query: 61 YAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQ 120
+ E P +++ Q+ ++ V E +P P E E + ++
Sbjct: 326 LS------------HREMIPKAELGK---QKKEAKPVLPEKMPEPFEQVRR--EERHEEK 368
Query: 121 SPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCV 180
+ E P+ P + P Q LK +YA + +A+
Sbjct: 369 AAEYTAPEIP-------------------AGP--------QGTLK-KYAAKP-EAKKSVF 399
Query: 181 ENRFHANIDPSKNKEAESELNR--VIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHA 238
+ N D K + LN ++ + K++GQ + +++Y+ LFI+DQHA
Sbjct: 400 AGVNYRN-DDGKEDLQQMTLNETSLLDEEAKPDRKVIGQLFKTYWLIEYEDQLFIMDQHA 458
Query: 239 TDEKYNFETLQKT---TLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSD 295
EK N+E L K+ I SQ + P + L+ +L++ +F + G F+ ++
Sbjct: 459 AHEKVNYEKLMKSFREKKIYSQGVEPPYVVTLSMAEAKVLEETKDIFQELG--FTIEAFG 516
Query: 296 DGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGR 355
+ +P + +E ELL L T P I AS AC+ S +
Sbjct: 517 GNEFCIRQVPANLYGLKEKELFMELLDSL--TADGVKKDPEMITDKIASMACKMSAKGNQ 574
Query: 356 ALSVGEMTGLVRNMGRIDQPW 376
+S+ E+ L+ + + P+
Sbjct: 575 RMSLPEVRNLLDLLMECENPY 595
>gi|20089411|ref|NP_615486.1| DNA mismatch repair protein [Methanosarcina acetivorans C2A]
gi|19914309|gb|AAM03966.1| DNA mismatch repair protein [Methanosarcina acetivorans C2A]
Length = 656
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 89/387 (22%), Positives = 170/387 (43%), Gaps = 50/387 (12%)
Query: 8 YHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLL-ATVKV--HITDSYAIG 64
Y + +YP +L + ++ + VDVNV P K ++ EK + A ++ + + +
Sbjct: 277 YTKIPKGRYPVAVLALTLNPEEVDVNVHPRKAEVRFSREKEVGDAVIRAVEKVLSEHGLA 336
Query: 65 FTV---DGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNS-NFSHEANLQQ 120
V +G + ++ E DP EKIQ + T+P + EA + +
Sbjct: 337 PEVREKEGKRLQKTFE-DPGLS---EKIQPQET----PATLPEKAAGKEIGVREEAKVSE 388
Query: 121 SPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDI---IQDQLKARYARRTVQAQD 177
+ ++ + T + D RL+ S R L D IQD LK V+
Sbjct: 389 NSRLLKEKSEAYTYPIKDTERRLKKSER-----LLDSDGKAGIQDGLK------KVEPAS 437
Query: 178 RCVENRFHANIDPSKNKEAESE-LNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQ 236
+ E + + I K +E +S+ L + E ++I+GQ + +I+ + DL IIDQ
Sbjct: 438 KKEEEKVNERI---KAEEKQSQKLKPKANTDLLEDLRIIGQVSKMYILAEKGEDLVIIDQ 494
Query: 237 HATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDD 296
HA E+ +E + +T + Q+L+ P + LT + ++++ +P + GF S D
Sbjct: 495 HAAHERVLYEQVLRTKKARVQELITPVMIELTPKERVLMEEYIPHLEEYGFGIS--EFGD 552
Query: 297 GNVLLTSLP----MSKNTTLGREDIEELLF---MLQHTNSTEHCRPSRIRAMFASRACRK 349
++T +P ++T + + I +LL + + T +E + + ACR
Sbjct: 553 NTYVVTFVPEVFGRLEDTGVIHDVISDLLAEGKVKKDTGISEK--------VSKTLACRA 604
Query: 350 SVMIGRALSVGEMTGLVRNMGRIDQPW 376
++ G A + +M L+ + + P+
Sbjct: 605 AIKGGAACNTRQMEELIEQLKAAESPY 631
>gi|399577953|ref|ZP_10771705.1| DNA mismatch repair protein mutl [Halogranum salarium B-1]
gi|399237395|gb|EJN58327.1| DNA mismatch repair protein mutl [Halogranum salarium B-1]
Length = 550
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 82/185 (44%), Gaps = 11/185 (5%)
Query: 197 ESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKT---TL 253
E+ L R + S+F+ + ++GQF +++ + D DL ++DQHA E+ N+E L+ +
Sbjct: 345 ETTLERREEDSLFDDVTVIGQFRDLYLLCEADDDLLVVDQHAAHERINYERLRAALTESS 404
Query: 254 IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFS-FDSSDDGNVLLTSLPMSKNTTL 312
++S + P+ + L+ + D + GFEFS F G LT LP
Sbjct: 405 VESVPVDPPETVSLSPAEAAVADDERETLARLGFEFSRFGG---GTYRLTGLPAPLGRVA 461
Query: 313 GREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRI 372
+ + + + E R ++ + AC S+ G L L+ +G
Sbjct: 462 DVSAFRDAIDAFRAGDDPEDARDELLKDL----ACHPSLKAGDVLDRETAAELLGRLGEC 517
Query: 373 DQPWV 377
+QP+
Sbjct: 518 EQPFA 522
>gi|392971906|ref|ZP_10337298.1| DNA mismatch repair protein MutL [Staphylococcus equorum subsp.
equorum Mu2]
gi|392509619|emb|CCI60590.1| DNA mismatch repair protein MutL [Staphylococcus equorum subsp.
equorum Mu2]
Length = 649
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 167/392 (42%), Gaps = 49/392 (12%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K + E YH ++P +NIEM VDVNV P K ++ + E L + I ++
Sbjct: 265 KAILEGYHTLLMVGRFPICYINIEMDPILVDVNVHPTKLEVRLSKEDQLFELIVEKIREA 324
Query: 61 YAIGFTVDGNNMNQSMEQDPSSD------VDMEKIQRSNSEEVEHETIPVPSEDNSNFSH 114
+ + N+MN+ +++ D +D EK R + H T N NF
Sbjct: 325 FKDRILIPQNDMNKLTQKNKVLDKFEQQKIDFEK--RKQQRDATHST-------NLNFDL 375
Query: 115 EANLQQSPETVEPD-TPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTV 173
+ N Q ET + + + D T+ + P S ++ST YA+
Sbjct: 376 DDN--QPNETKQSNQSLDNTLSSPNTTPDDSYSVQEST--------------YDYAKTQR 419
Query: 174 QAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEK---MKIVGQFNLGFIIVKYDSD 230
+ E + PS++ S++ I + ++ M++VGQ + +II + ++
Sbjct: 420 DVLNDMEEQDITDTLAPSEDVAEASDIKGSISSNPSQRIPYMEVVGQVHGTYIIAQNENG 479
Query: 231 LFIIDQHATDEKYNFETLQKTTLIKS---QKLVVPQNLHLTKINQCILKDNLPVFYKNGF 287
+F+IDQHA E+ +E ++ S Q L++P H +K I+ ++ K G
Sbjct: 480 MFMIDQHAAQERIKYEYFREKIGDVSNEIQNLLIPLTFHFSKDELMIINQHVEELDKVGV 539
Query: 288 EFS-FDSSDDGNVLLTSLPMSKNTTLGREDIEELL-FMLQHTNSTEHCRPSRIRAMFA-S 344
F +D ++ S P+ E I++++ ++L+H + +IR A
Sbjct: 540 HLEPFGGND---YIVDSYPVWFPAAEAEEIIKDMIEYVLEH----KKVNVKKIREEAAIM 592
Query: 345 RACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+C+KS+ L EM LV + + P+
Sbjct: 593 MSCKKSIKANHYLKNNEMADLVNQLRETEDPF 624
>gi|397594637|gb|EJK56296.1| hypothetical protein THAOC_23851 [Thalassiosira oceanica]
Length = 790
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 80/197 (40%), Gaps = 25/197 (12%)
Query: 204 IKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETL--------------- 248
+ K M +++ Q FIIV L +DQHA DE+ + E L
Sbjct: 532 LTKEMLNSAEVIAQVEHKFIIVNMRGVLCAVDQHAADERVSLEKLEDALFNPDLHESDVI 591
Query: 249 -------QKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLL 301
Q LIK ++ + L+L+ + + + ++ ++F+F D VLL
Sbjct: 592 RLTKRSIQVADLIKGIQIFPAKRLYLSMPQMTTARHHASLLHR--WKFTFQEVDSRTVLL 649
Query: 302 TSLPMSKNTTLGREDIEELLFMLQHTNSTEHC-RPSRIRAMFASRACRKSVMIGRALSVG 360
T LP T + + L H C +PS ++ + AS ACR + M G L
Sbjct: 650 TGLPSICGRTPSVSEFTSFVNELGHVAGAADCVKPSFVKNILASNACRYATMFGDELQHS 709
Query: 361 EMTGLVRNMGRIDQPWV 377
L+ ++G P+V
Sbjct: 710 RCVDLIASLGACRLPFV 726
>gi|302670849|ref|YP_003830809.1| DNA mismatch repair protein MutL [Butyrivibrio proteoclasticus
B316]
gi|302395322|gb|ADL34227.1| DNA mismatch repair protein MutL [Butyrivibrio proteoclasticus
B316]
Length = 666
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 92/397 (23%), Positives = 163/397 (41%), Gaps = 44/397 (11%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K + E Y Q+ H++PF IL+I M VDVNV P K ++ +++ LL +K + +
Sbjct: 266 KALEEGYKQYLMMHKFPFAILHIRMDPSMVDVNVHPAKLEVRFNNQALLYDFIKTSVENV 325
Query: 61 YAIGFTV--------------DGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPS 106
+ + + N N +S + EK+ +E+ + P P
Sbjct: 326 LSAQEMIPDALLSSKDDEKASEANGANSLSSTASTSGLAPEKVHAHETEKPSNRPAPQPF 385
Query: 107 EDNSNFSHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKA 166
E E N E V E I+D+ + R + LD + +
Sbjct: 386 E---RVRFEENKVAESEPVYATGVKEKPIKIEDVNKSAVWTR----IFGDLDGSKAEKND 438
Query: 167 RYARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVK 226
R ++ QD V + ++ K V+ K ++ +I+GQ + I+
Sbjct: 439 R-PSSIIKQQDAIVVEKKPVQLNLFDEK--------VLTKENVKEYEILGQIFGTYWIIG 489
Query: 227 YDSDLFIIDQHATDEKYNFETLQ---KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFY 283
+ +F++DQHA EK N+E + K+ I SQ + P + L+ + I + F
Sbjct: 490 FKDKMFMVDQHAAHEKVNYERMMKRYKSGDILSQMVNPPVIVTLSAAEEEIFLEYRQYFE 549
Query: 284 KNGFEFSFDSSDDGNVLLTSLPMSKNTTLG----REDIEELLFMLQHTNSTEHCRPSRIR 339
K G F+ ++ + ++P+ G +E +E+L L H S + P I
Sbjct: 550 KLG--FNIENFGGHEYAMRAIPVD---LFGCDNEKEMFQEILDELSHETSLDRT-PDVIN 603
Query: 340 AMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
AS AC+ SV ++ EM L+ + ++D P+
Sbjct: 604 YKIASMACKASVKGNTRMTTQEMEALLDELLKLDNPY 640
>gi|294791814|ref|ZP_06756962.1| DNA mismatch repair protein MutL [Veillonella sp. 6_1_27]
gi|294457044|gb|EFG25406.1| DNA mismatch repair protein MutL [Veillonella sp. 6_1_27]
Length = 685
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 94/417 (22%), Positives = 169/417 (40%), Gaps = 59/417 (14%)
Query: 1 MKLVNEVYHQF---NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHI 57
MK ++ YH N H P ++LNI + VD+NV P K ++ +K++ V I
Sbjct: 265 MKAIDNAYHALLPKNGH--PLVVLNITVPARMVDINVHPRKSEVKFSDDKIIFKAVYHGI 322
Query: 58 TDSYAIGFTVDGNNMNQSMEQDPSSDV--DMEKIQRSNSEEVEHETIPVPSEDNSNFSHE 115
++ N +++ E++ SS + + I ++ + + D NFS
Sbjct: 323 LNAL-------NNPLHERYERESSSYMTGTVANISDKYGNDIASNSNSNSNSDIKNFSSN 375
Query: 116 ANL---------QQSPETVEPDTPD-ETIEVIDDMPRLQGSYRQSTPVTLSLDIIQ--DQ 163
+ Q+P V E I D ++ G R + + Q +
Sbjct: 376 STFLAGNTTYDSYQAPTVVHDSMQSAEHIATAIDYDKVFGGRRTKGYEVMRGETSQFVEN 435
Query: 164 LKARY----ARRTVQAQDRCVENRFHA---------NIDPSKNKEAESEL------NRVI 204
LK + A + Q V+ F A + D K K ++ R I
Sbjct: 436 LKTKGYTPPAPKATYEQSSFVDESFEAVPTAYTSYTSEDVEKFKSLSHDIRNEEIEERTI 495
Query: 205 KKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTT-LIKSQKLVVPQ 263
+ S F M GQ +I+ K DL+IIDQHA E+ ++ L K++ I Q ++VPQ
Sbjct: 496 QNSGFLPM---GQVASCYILAKKGDDLYIIDQHAAHERVRYDKLCKSSESIPMQSILVPQ 552
Query: 264 NLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFM 323
T ++++ GF+ + L P+ + E I + +F
Sbjct: 553 YSEATNDEMNLVEEERETLLDLGFDVELGGPT--KIKLVGAPVDLVESKAFE-ILQYIFS 609
Query: 324 LQHTNSTEHCRPSRIR---AMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPWV 377
H +H +P++ + M A +CR ++ G L++ +MT L+ ++ ++P+V
Sbjct: 610 YLH----DHQQPTKAQLRHEMLAYASCRGAIKAGHNLNMYQMTTLIEDLFSTEKPYV 662
>gi|448734128|ref|ZP_21716355.1| DNA mismatch repair protein MutL [Halococcus salifodinae DSM 8989]
gi|445800637|gb|EMA50986.1| DNA mismatch repair protein MutL [Halococcus salifodinae DSM 8989]
Length = 554
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 80/182 (43%), Gaps = 8/182 (4%)
Query: 197 ESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKS 256
+S L +S F+ + ++GQF +++ + D DL ++DQHA E+ NFE L++
Sbjct: 352 DSSLGEPACESTFDAIGVIGQFRDLYLLCEADDDLLVVDQHAAHERINFERLREALDDGI 411
Query: 257 QKLVV-PQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGRE 315
+ + P +L LT ++ N GF DS G T LP
Sbjct: 412 DSVPIEPTSLSLTAAEAALVDANAEALDALGFRIEADS---GAYRATGLPAPLGRVAEPS 468
Query: 316 DIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQP 375
+ ++L + E+ R ++ + AC S+ G +L+ + LV +G +QP
Sbjct: 469 AVHDVLDAFLAGDGPENPREELLKDV----ACHPSLKAGDSLTGEDAARLVERLGACEQP 524
Query: 376 WV 377
+
Sbjct: 525 FA 526
>gi|167758189|ref|ZP_02430316.1| hypothetical protein CLOSCI_00527 [Clostridium scindens ATCC 35704]
gi|336421687|ref|ZP_08601843.1| hypothetical protein HMPREF0993_01220 [Lachnospiraceae bacterium
5_1_57FAA]
gi|167664086|gb|EDS08216.1| DNA mismatch repair domain protein [Clostridium scindens ATCC
35704]
gi|336000158|gb|EGN30311.1| hypothetical protein HMPREF0993_01220 [Lachnospiraceae bacterium
5_1_57FAA]
Length = 652
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 89/402 (22%), Positives = 165/402 (41%), Gaps = 67/402 (16%)
Query: 2 KLVNEVYHQFN-NHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K + + Y F H+YPF++L+IE+ + VDVNV P K ++ ++++ + ++ +
Sbjct: 266 KAIEDAYKDFTMQHKYPFVVLHIEIDGEHVDVNVHPTKMELRFNNQQEVYNSIYAAVDHG 325
Query: 61 YAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQ 120
+ E P +VD K P + H A +
Sbjct: 326 L------------HAEELIPHVEVDAPKAA-------------APMKQEGGAPHAAQKKD 360
Query: 121 SPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKAR----YARRTVQAQ 176
+P PD T V P P +LD ++K R +A++ +A
Sbjct: 361 NPV-----VPDRTTSV---QPAPSAKKSVPAPEERTLDYFMQKMKERVAAYHAQQNQEAP 412
Query: 177 DRCVENRFHANIDPSKNKE-------------AESELN----RVIKKSMFEKMKIVGQFN 219
+ + + A PS+++ A +LN ++++ + + KI+GQ
Sbjct: 413 KKAPDVKVSAQ--PSEDRREAPSDRVCETPEYAAQQLNLFEENLVERKVQAEYKIIGQVF 470
Query: 220 LGFIIVKYDSDLFIIDQHATDEKYNFE-TLQ--KTTLIKSQKLVVPQNLHLTKINQCILK 276
+ +V+++ L+IIDQHA E+ +E TL+ KT SQ + P L L+ +L
Sbjct: 471 ETYWLVEFNDSLYIIDQHAAHERVLYEKTLKSMKTREFTSQFISPPIVLDLSMQEAELLN 530
Query: 277 DNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNS--TEHCR 334
+ F + GFE + + + ++P G + LL ML + + +
Sbjct: 531 QYMDQFTRIGFE--IEEFGQESYAVRAVP---GNLFGIAKKDLLLQMLDGLSDEVSRNLS 585
Query: 335 PSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
P I AS +C+ +V LS E+ L+ + ++ P+
Sbjct: 586 PDMIDEKVASMSCKAAVKGNMKLSATEVDSLIGELLTLENPY 627
>gi|197301743|ref|ZP_03166813.1| hypothetical protein RUMLAC_00469 [Ruminococcus lactaris ATCC
29176]
gi|197299183|gb|EDY33713.1| DNA mismatch repair domain protein [Ruminococcus lactaris ATCC
29176]
Length = 713
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 95/427 (22%), Positives = 171/427 (40%), Gaps = 56/427 (13%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATV------- 53
K + + Y F H++PF +L+ ++ + VD+NV P K ++ ++ + TV
Sbjct: 266 KALEDAYRDFVMQHKFPFAVLHFHLNGEEVDINVHPTKMELRFQKQQEVYGTVFEAVHRT 325
Query: 54 --------KVHITDSYAIGFTVDGNNMNQSMEQD--------PSSDVDMEKIQRSNSEEV 97
+ + + A+ + + E+ P + M R+ E
Sbjct: 326 LLEPELIQRAEVPEPVAVRMEEEKRRSEEKAERRKESPFLLRPRASASMAGESRTVYGEN 385
Query: 98 EHETIPVPSEDNSNFSHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPV---- 153
+ S + + + A ++ E ++P E + M G+ Q PV
Sbjct: 386 PYTKKDAESTERTGAAQPAEHTENSEVMQPTGDQERTGAVQSMESTAGTQVQPDPVPDNA 445
Query: 154 ------TLSLDIIQDQLKAR---YARRTVQA----------QDRCVENRFHANIDPSKNK 194
D +++ R Y R+ A QD +E R + K K
Sbjct: 446 GTGRATVRDEDYFIRKMRERVLSYHNRSSSAEVSDKNGIFRQDEQME-RISERVQEQKEK 504
Query: 195 EAESEL--NRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFE-TLQ-- 249
+ +L +K+ + + K++GQ + +V++ L+IIDQHA E+ +E TLQ
Sbjct: 505 PKQMDLFEENFLKREVRAEYKLIGQVFDTYWLVEFQDKLYIIDQHAAHERVLYERTLQGM 564
Query: 250 KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKN 309
KT SQ L P L L+ +L +NL F + GFE ++ V ++P +
Sbjct: 565 KTREFTSQYLSPPIILSLSMQEAQLLNENLDRFTRIGFEIEPFGGEEYAV--RAVPDNLF 622
Query: 310 TTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
+ +E + E+L L ST P I AS +C+ +V LS E+ L+ +
Sbjct: 623 SIAKKELLMEMLDDLADGLST-GMTPELIDEKVASMSCKAAVKGNNRLSAQEVDELIAEL 681
Query: 370 GRIDQPW 376
+D P+
Sbjct: 682 LTLDNPY 688
>gi|269797933|ref|YP_003311833.1| DNA mismatch repair protein MutL [Veillonella parvula DSM 2008]
gi|269094562|gb|ACZ24553.1| DNA mismatch repair protein MutL [Veillonella parvula DSM 2008]
Length = 681
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 100/424 (23%), Positives = 174/424 (41%), Gaps = 77/424 (18%)
Query: 1 MKLVNEVYHQF---NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHI 57
MK ++ YH N H P ++LNI + VD+NV P K ++ +K++ V I
Sbjct: 265 MKAIDNAYHALLPKNGH--PLVVLNITVPARMVDINVHPRKSEVKFSDDKIIFKAVYHGI 322
Query: 58 ---------------TDSYAIGFTVDGNNMNQSMEQDPSSDVDME-KIQRSNSEEVEHET 101
+ SY G TVD N++ D +S+ D K SNS + T
Sbjct: 323 LNALNNPLHERYERESSSYMTG-TVD--NISDKYGNDIASNSDSNIKNFSSNSTSLAGNT 379
Query: 102 IPVPSEDNSNFSHEANLQQSPETVEPDTP-----------------DETIEVIDDM---- 140
S H++ QS E + ET + ++++
Sbjct: 380 T-YDSYQTPTVVHDS--MQSAEHIATAIDYDKVFGGRRTKGYEVMRGETSQFVENLKTKG 436
Query: 141 ---PRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKNKEAE 197
P + +Y QS+ V S + + + Y V+ +F + +N+E E
Sbjct: 437 YTPPAPKATYEQSSFVDESFEAVPTAYTS-YTTEDVE--------KFKSLSHDIRNEEVE 487
Query: 198 SELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTT-LIKS 256
R I S F M GQ +I+ K DL+IIDQHA E+ ++ L K++ I
Sbjct: 488 ---ERTIHNSGFLPM---GQVASCYILAKKGDDLYIIDQHAAHERVRYDKLCKSSESIPM 541
Query: 257 QKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGRED 316
Q ++VPQ T ++++ + GF+ + L P+ + E
Sbjct: 542 QSILVPQYNEATDDEMNLVEEEREILLDLGFDVELGGPT--KIKLVGAPVDLVESKAFE- 598
Query: 317 IEELLFMLQHTNSTEHCRPSRIR---AMFASRACRKSVMIGRALSVGEMTGLVRNMGRID 373
I + +F H +H +P++ + M A +CR ++ G L++ +MT L+ ++ +
Sbjct: 599 ILQYVFSYLH----DHQQPTKAQLRHEMLAYASCRGAIKAGHNLNMYQMTTLIEDLFSTE 654
Query: 374 QPWV 377
+P+V
Sbjct: 655 KPYV 658
>gi|118443055|ref|YP_878179.1| DNA mismatch repair protein [Clostridium novyi NT]
gi|166232086|sp|A0Q0M7.1|MUTL_CLONN RecName: Full=DNA mismatch repair protein MutL
gi|118133511|gb|ABK60555.1| DNA mismatch repair protein hexb [Clostridium novyi NT]
Length = 645
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 171/378 (45%), Gaps = 51/378 (13%)
Query: 14 HQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATV--KVHITDSYAIGFTVDGNN 71
+++PF +L +++ + +DVNV P K ++ E+++ V VH S +I + N
Sbjct: 279 NKFPFFVLFVDIYPEFIDVNVHPTKSEVKFQDERIIYKVVFDAVHSALSTSIK---ESFN 335
Query: 72 MNQ-SMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTP 130
+N+ S+ D + ++ + + E+V+ IP+ ++ + S NL + V + P
Sbjct: 336 INKDSIFDDKDTTYNLIQDETPKQEQVQ---IPIDLQNKRSDSIIENLPKFNPNVSYEKP 392
Query: 131 DETIEVIDDMPRLQGSYRQST--PVTLSLDIIQDQLKAR--YARRTVQAQDR---CVENR 183
+ S R++ + ++L ++LK + Y ++ A + E
Sbjct: 393 -------------KDSCRENCLNSIDINLKNTTEELKTKDIYYENSISASPKDNILCEKS 439
Query: 184 FHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKY 243
NID EA+ F ++ I+GQFN +I+ + ++IDQHA EK
Sbjct: 440 QSKNIDNYNTIEAK-----------FPRLNILGQFNKTYILAESLDTFYMIDQHAAHEKI 488
Query: 244 NFETLQ---KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVL 300
FE + + + SQ L+ P + ++ + +N+ +F+++G F + D +
Sbjct: 489 LFEKFKNQIENRDVISQILLTPVIIEMSAEDFAYYSENINIFHESG--FVTEVFGDNIIS 546
Query: 301 LTSLPMSKNTTLGREDIEELLF-MLQHTNSTEHCRPSRIR-AMFASRACRKSVMIGRALS 358
+ PM LG+ ++ + + + ++I+ M +S AC+ ++ LS
Sbjct: 547 IREAPM----LLGKVSTKDFFLEIFDDIKNMGNGNIAKIKHNMISSLACKAAIKANHTLS 602
Query: 359 VGEMTGLVRNMGRIDQPW 376
EM L+ ++ I++P+
Sbjct: 603 YEEMNSLIEDLRYIEEPF 620
>gi|355570879|ref|ZP_09042149.1| DNA mismatch repair protein mutL [Methanolinea tarda NOBI-1]
gi|354826161|gb|EHF10377.1| DNA mismatch repair protein mutL [Methanolinea tarda NOBI-1]
Length = 600
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 85/176 (48%), Gaps = 8/176 (4%)
Query: 205 KKSMFEKMKIVGQFNLGFIIVKY--DSDLFIIDQHATDEKYNFETLQKTTLIKSQ--KLV 260
++ +M ++GQ + +I+ + DL ++DQHA E+ F+ L I+SQ +L+
Sbjct: 405 REGFLPEMDVLGQLDDTYILASFRGGEDLILVDQHAAHERILFDQLTAGDAIQSQSQELL 464
Query: 261 VPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEEL 320
VP L L+ Q IL D +PV + G F+ + G+ + ++P+ + + EL
Sbjct: 465 VPVILDLSPREQSILPDIVPVLCEAG--FTIEEFGGGSYAVRAIPVVLGRQVDPGAVREL 522
Query: 321 LFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
L + N E PSR A+ ACR ++ G LS + L+ + + P+
Sbjct: 523 LSAILAGN--EKHGPSRADAIRKVVACRGAIKAGTPLSREQCRTLLNELRQTSHPF 576
>gi|346314848|ref|ZP_08856365.1| hypothetical protein HMPREF9022_02022 [Erysipelotrichaceae
bacterium 2_2_44A]
gi|345905786|gb|EGX75523.1| hypothetical protein HMPREF9022_02022 [Erysipelotrichaceae
bacterium 2_2_44A]
Length = 695
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 88/407 (21%), Positives = 174/407 (42%), Gaps = 58/407 (14%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDH----EKLLLATV-----------KVHITD 59
+YP +++++ M VDVNV P K +I + EKLL T+ +V+IT
Sbjct: 278 RYPIVVIDLLMDAQLVDVNVHPSKWEIRLSKEKQLEKLLYETIRKALQEQLEVPRVNITK 337
Query: 60 SYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSH--EAN 117
+ V+ + + E+D S E++ N + E PS D EA+
Sbjct: 338 E-TVKEKVEEQELQFTYERDDSISRLHEEV---NDSFIHPEKNEKPSLDMKELRRKIEAD 393
Query: 118 LQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARY--------- 168
+ E+ P +T E++ ++ SY ++ + +K ++
Sbjct: 394 KNRRKESAASIQP-KTKEILPEIREETASYESEDSTSVKAVTEEADVKVQHEDTDKTEVL 452
Query: 169 --ARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFE----------KMKIVG 216
A +A + +E ++ + + ++SE KK+ E +++++G
Sbjct: 453 PAADTGSEAHTQAIEPDISSDAAVAYKEISQSEELVYEKKAEVEQPQPLNPSLPQLRVIG 512
Query: 217 QFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIK---SQKLVVPQNLHLTKINQC 273
QF+ +I+ + + L+IIDQHA E+Y++E ++K L +Q L++P + T I+
Sbjct: 513 QFHSCYILAEGEKGLYIIDQHAAQERYHYEIIRKQILDGNNDTQPLLLPITIEST-ISAV 571
Query: 274 ILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHC 333
D+L + + D + LP L +D+EE F+ + E
Sbjct: 572 SQADDLNALLEQ-LGIHLEVFGDHTFVCRQLP------LWMKDVEEEAFLCDMIDIWEKD 624
Query: 334 RPSRI----RAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+ + + A+ AC S+ R+L++ EM ++ ++ +QP+
Sbjct: 625 KEISLDKLRKHAIATMACHSSIRFNRSLTLDEMKRVIEDLAHCEQPF 671
>gi|188588377|ref|YP_001921075.1| DNA mismatch repair protein [Clostridium botulinum E3 str. Alaska
E43]
gi|188498658|gb|ACD51794.1| DNA mismatch repair protein MutL [Clostridium botulinum E3 str.
Alaska E43]
Length = 676
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 89/402 (22%), Positives = 176/402 (43%), Gaps = 70/402 (17%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLL--------ATVKVHITDSYAI--- 63
++PF IL IE+ + +DVN+ P K ++ + E+ + ++K + ++++I
Sbjct: 280 KFPFFILFIEIYPEYIDVNIHPTKSEVKFNDERFIFKRIFSAVHTSLKEEVFNTFSIPEE 339
Query: 64 --GFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQS 121
T+ +N+N E + + EK+ + N+ + + I EDNS H + +
Sbjct: 340 EKEATIKNSNLNIE-EITFKIEEEQEKV-KLNTNHLSQKNICSTFEDNSINKHIYDEKHK 397
Query: 122 PETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLD---------------IIQDQLKA 166
+T ++ +++P + PV L D +I + +A
Sbjct: 398 IDT----------DIYNNIP-----LNVNIPVDLKCDHIRLEEDNNSNSNKQVISENSEA 442
Query: 167 RYARRTVQAQDRCVENRFHANIDPSKNKEAESELNRV-----IKKSM--FEKMKIVGQFN 219
+Y D+ E+ + D ES+LN + +K+ + F +KI+GQ+N
Sbjct: 443 KYETFYTSKSDQ-YEHSYKCETD------NESKLNVIETSDLVKEKIPKFPPIKIIGQYN 495
Query: 220 LGFIIVKYDSDLFIIDQHATDEKYNFETLQ---KTTLIKSQKLVVPQNLHLTKINQCILK 276
+I+ +Y L++IDQHA EK FE I Q L++P + L+ + +
Sbjct: 496 KTYILGEYAGTLYMIDQHAAHEKIMFEKYLNDINCGDIIIQPLMIPTVIDLSMDDYSYFE 555
Query: 277 DNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLF-MLQHTNSTEHCRP 335
+N VF + G F+ + ++ L +P LG+ + L +L + + +
Sbjct: 556 ENKDVFKEAG--FTIEEFGGTSIALKEVPY----FLGKLKPKNLFLEILDNLKNLGSGKT 609
Query: 336 SRIRA-MFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+ ++ A++AC+ +V +L EM L+ + ID P+
Sbjct: 610 TEVKYNAIATKACKSAVKGNDSLDELEMVKLIEELRYIDDPF 651
>gi|421076047|ref|ZP_15537049.1| DNA mismatch repair protein mutL [Pelosinus fermentans JBW45]
gi|392525906|gb|EIW49030.1| DNA mismatch repair protein mutL [Pelosinus fermentans JBW45]
Length = 606
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/381 (21%), Positives = 150/381 (39%), Gaps = 73/381 (19%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K ++ YH YP +LN+ + D++DVNV P K ++ E+ + V + +
Sbjct: 269 KALDNAYHSLLPKSGYPLAVLNVSVPTDTIDVNVHPQKSEVKFSDEQKIFRAVYKAVIEV 328
Query: 61 YAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEA-NLQ 119
+ D + +PSS +SH A N
Sbjct: 329 LSAPHAPDQLAATVEFKPNPSS-----------------------------YSHSASNPY 359
Query: 120 QSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRC 179
+ + +P ++ ++ S Q TP L L++++D L+
Sbjct: 360 TNNDYKKPSYNAVSVPIV--------SSWQETP--LPLNVVRDTLEKEEMM--------- 400
Query: 180 VENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHAT 239
S + A + ++R+I+ S F + +GQ + FII K L+IIDQHA
Sbjct: 401 -----------SFDTPAPNVISRIIEDSQF-TLYPLGQVDDCFIISKGPDGLYIIDQHAA 448
Query: 240 DEKYNFETL-QKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGN 298
E+ ++ + Q T I SQ+L+VP L I+ + FYK GF +
Sbjct: 449 HERILYDKMSQHTERIPSQQLLVPLFLDFDTTEINIISEYHDTFYKLGFTLELAGPNTMR 508
Query: 299 V--LLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIR-AMFASRACRKSVMIGR 355
+ L + +P+S+ R+ +L++ + P +R +CR ++ G
Sbjct: 509 LSELPSDIPLSETEASIRQ-------ILEYIQNMHEPNPQELRHHCLQIASCRAAIKAGE 561
Query: 356 ALSVGEMTGLVRNMGRIDQPW 376
L++ +M L+ + P+
Sbjct: 562 TLNMRQMQALIGELCNTHLPY 582
>gi|323445867|gb|EGB02269.1| hypothetical protein AURANDRAFT_35408 [Aureococcus anophagefferens]
Length = 161
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 70/135 (51%), Gaps = 4/135 (2%)
Query: 246 ETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSF-DSSDDGN-VLLTS 303
E L + T + +Q L+ P +L L + L + + GF + D + G V + S
Sbjct: 1 EALWRDTRVDTQPLLAPLSLDLGATEELALLERRCTVERVGFRLAVNDLAPPGRRVAVIS 60
Query: 304 LPMSKNTTLGREDIEELLFMLQHTNSTEHCRP--SRIRAMFASRACRKSVMIGRALSVGE 361
+P ++ TT G DI EL+ +L + + P ++ +FAS+ACR +VMIG L +
Sbjct: 61 VPSARGTTFGVSDIRELITLLDDDAAHDTPLPKLPKLHTLFASKACRAAVMIGTPLIKTK 120
Query: 362 MTGLVRNMGRIDQPW 376
MT L+ ++ + QPW
Sbjct: 121 MTQLLDHLATLLQPW 135
>gi|331091140|ref|ZP_08339982.1| hypothetical protein HMPREF9477_00625 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330405362|gb|EGG84898.1| hypothetical protein HMPREF9477_00625 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 638
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 89/395 (22%), Positives = 167/395 (42%), Gaps = 67/395 (16%)
Query: 2 KLVNEVYHQFN-NHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K + + Y F H+YPF +L+ + + +DVNV P K ++ H + + V + ++
Sbjct: 266 KAIEDAYKDFTMQHKYPFTVLHFWLDGNDIDVNVHPTKMELRFSHRQEVYDFVYRAVKET 325
Query: 61 YAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQ 120
+E E IP + S + E N+
Sbjct: 326 L-----------------------------------IEPELIP--RVEISKPTEEKNV-- 346
Query: 121 SPETVEPDTPDETIEVIDDMPRLQGSYRQSTPV-----------TLSLDIIQDQLKARYA 169
PE P+ DE + R+Q +RQ++ L +D I++ +
Sbjct: 347 -PEKKVPEVHDEAYFMKKMRERVQSYHRQASQAEVKDTTELHRGNLQIDRIKEAVTYNKN 405
Query: 170 RRTVQAQDRCVENRFH-ANIDPSKNKEAESELN----RVIKKSMFEKMKIVGQFNLGFII 224
R + ++R + A D S+ +AE +LN +++ K ++ K++GQ + +
Sbjct: 406 R---EREERSAQPVMQPAQPDMSQEMKAE-QLNFFEEKLLTKKAVQEYKLIGQVFDTYWL 461
Query: 225 VKYDSDLFIIDQHATDEKYNFE-TLQ--KTTLIKSQKLVVPQNLHLTKINQCILKDNLPV 281
V++ L+IIDQHA E+ +E TL K SQ L P L+L+ +L +++ +
Sbjct: 462 VEFQEQLYIIDQHAAHERVLYEKTLHGMKDRTFTSQYLSPPIILNLSMQEARLLTEHMDL 521
Query: 282 FYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAM 341
F K GFE D + + ++P + + +E + E+L L ++ P I
Sbjct: 522 FSKIGFEIENFGGD--SFAVRAVPDNLFSIAKKELLMEMLDNLSDDITSAEA-PDLIGEK 578
Query: 342 FASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
A+ +C+ +V LS E+ L+ + ++ P+
Sbjct: 579 IAAMSCKAAVKGNAKLSSAEVNALIGELLELENPY 613
>gi|448386288|ref|ZP_21564414.1| DNA mismatch repair protein MutL [Haloterrigena thermotolerans DSM
11522]
gi|445655239|gb|ELZ08085.1| DNA mismatch repair protein MutL [Haloterrigena thermotolerans DSM
11522]
Length = 734
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 84/425 (19%), Positives = 151/425 (35%), Gaps = 55/425 (12%)
Query: 3 LVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHI----- 57
L+ Q +YPF+ L +E+ +VDVNV P KR++ D + + V +
Sbjct: 284 LMGAYGTQLGGDRYPFVTLFLEVPGGAVDVNVHPRKREVRFDDDDAVRRQVDAAVESALL 343
Query: 58 -------------------------------TDSYAIGFTV----DGNNMNQSMEQDPSS 82
TD A G DG S D S
Sbjct: 344 DHGLLRSRAPRGRSAPGEARVRPDARGTGAGTDPAAAGGEPATLEDGVETASSAATDSSG 403
Query: 83 ---DVDMEKIQRSNSEEVEHETIPV----PSEDNSNFSHEANLQQSPETVEPDTPDETIE 135
D D + ++RS+++ + P D++ + + + ++ P
Sbjct: 404 TERDGDDDPVERSSTDGAANARTETDAGDPVADSNGAAGDRAASANSDSSGSTAPTAVDS 463
Query: 136 VIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKNKE 195
P GS S+ D + A T + +D + +F A + +
Sbjct: 464 ATHTEPDAGGSTADSSETEGESDRAA-TIGASSGSGTNRDRDHDADRKFDAATE-QRTLT 521
Query: 196 AESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL-- 253
E+ ++++GQ + +++ + D L +IDQHA DE+ N+E LQ
Sbjct: 522 GEAATGEETAFDSLPALRVLGQLHDTYLVCETDDGLVLIDQHAADERVNYERLQAAFADD 581
Query: 254 IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLG 313
+Q L P L LT + G F D +DD V +T++P TL
Sbjct: 582 ATAQALADPVELELTAAEAEAFAQYSEALSRLG--FYADRTDDRTVAVTTVPAVLEKTLE 639
Query: 314 REDIEELL--FMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGR 371
+ + ++L F+ + + AC S+ +L+ G + L+ +
Sbjct: 640 PDRLRDVLASFVAGDREAGAETVDALADEFLGDLACYPSITGNTSLTEGSVVDLLEALDD 699
Query: 372 IDQPW 376
+ P+
Sbjct: 700 CENPY 704
>gi|159118777|ref|XP_001709607.1| Pms1-like protein [Giardia lamblia ATCC 50803]
gi|157437724|gb|EDO81933.1| Pms1-like protein [Giardia lamblia ATCC 50803]
Length = 727
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 85/198 (42%), Gaps = 34/198 (17%)
Query: 209 FEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKT--TLIKSQKLVVPQNLH 266
F +K + Q+N F+I + ++ ++IDQHA E +F + QK + P L
Sbjct: 494 FNNLKYICQYNQSFLITQLNNTFYLIDQHAAHEAKHFSDYWHNPHCYLSRQKTITPLKLR 553
Query: 267 LTKINQCILKDNL--PVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFML 324
L + L++ L +F GFE + VL+ S P TL ED E L L
Sbjct: 554 LRPDEKLCLEEFLSSAIFDIIGFELCL---SENYVLIFSFPSLFGQTLTEEDFREYLLSL 610
Query: 325 QHTNSTEH-----C---------------------RPSRIRAMFASRACRKSVMIGRALS 358
+ ++ EH C P RIR +FAS++C+ SV +G L
Sbjct: 611 -YGHTREHVESIICAKSTGSKPREKSLLCLLHNNIAPPRIRKIFASKSCKASVRLGDPLL 669
Query: 359 VGEMTGLVRNMGRIDQPW 376
++ ++ R ++P+
Sbjct: 670 DSTAKRIIADLARCEKPF 687
>gi|373496364|ref|ZP_09586910.1| DNA mismatch repair protein MutL [Fusobacterium sp. 12_1B]
gi|371965253|gb|EHO82753.1| DNA mismatch repair protein MutL [Fusobacterium sp. 12_1B]
Length = 648
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 171/390 (43%), Gaps = 42/390 (10%)
Query: 3 LVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYA 62
+++ Y + +YPF IL +E+ VDVNV P K+ + +E + V I + +
Sbjct: 258 IIDGYYTKLMKGKYPFAILFLEIDPKEVDVNVHPSKKIVKFSNESNIYGKVLKEIENCF- 316
Query: 63 IGFTVDGNN------MNQSMEQDPSSDVDMEKIQR---SNSEEVEHETIPV---PSEDNS 110
DG++ M ++++++ S +D + + +E E I V P E +
Sbjct: 317 -----DGDDVFVSPTMEKNIKKESESLIDFTEFSKFVPMKAENTTFEGIEVERYPKERRT 371
Query: 111 NFS---HEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKAR 167
S E +++ E V+ DE DD + ++++ + +I +
Sbjct: 372 EISPIEAEEETEKTEEAVKIQKSDE-----DDFENMFSEKKKNSTFEIKEEI--KVFEGN 424
Query: 168 YARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKY 227
T+++ D E R D K++ A SE K+ F K++GQ FI+V+
Sbjct: 425 EKSDTIKS-DVVSEIRAEVKEDIIKSEAAVSEERAAAPKTDF---KVLGQIFDSFILVER 480
Query: 228 DSDLFIIDQHATDEKYNFETLQK---TTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYK 284
D I DQH E+ +E L+K T + Q+L+VP + L + ++ +N+ F
Sbjct: 481 DGVFEIYDQHIVHERILYEKLKKEYYGTNVSRQQLLVPLRITLDPRERELIFENIEYFTA 540
Query: 285 NGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFAS 344
GFE D D+ V++ S+P+ + D E +F N E+ ++ S
Sbjct: 541 FGFE--IDEFDENEVVIRSVPV-----MNFRDSTENIFRNIIKNLKENKETDIRESIIIS 593
Query: 345 RACRKSVMIGRALSVGEMTGLVRNMGRIDQ 374
+C+ ++ L++ EM ++R + I +
Sbjct: 594 MSCKGAIKANEKLTLHEMETIIRRLHEIGE 623
>gi|404368802|ref|ZP_10974150.1| DNA mismatch repair protein MutL [Fusobacterium ulcerans ATCC
49185]
gi|404288391|gb|EFS24929.2| DNA mismatch repair protein MutL [Fusobacterium ulcerans ATCC
49185]
Length = 648
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 171/390 (43%), Gaps = 42/390 (10%)
Query: 3 LVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYA 62
+++ Y + +YPF IL +E+ VDVNV P K+ + +E + V I + +
Sbjct: 258 IIDGYYTKLMKGKYPFAILFLEIDPKEVDVNVHPSKKIVKFSNESNIYGKVLKEIENCF- 316
Query: 63 IGFTVDGNN------MNQSMEQDPSSDVDMEKIQR---SNSEEVEHETIPV---PSEDNS 110
DG++ M +++E++ + +D + + +E E I V P E +
Sbjct: 317 -----DGDDVFVSPTMEKNIEKESEALIDFTEFSKFVPMKAENTTFEGIEVERYPKERRT 371
Query: 111 NFS---HEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKAR 167
S E +++ E V+ DE DD + ++++ + +I +
Sbjct: 372 EISPIEAEEETEKTEEAVKIQKSDE-----DDFENMFSEKKKNSTFEIKEEI--KVFEGN 424
Query: 168 YARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKY 227
T+++ D E R D K++ A SE K+ F K++GQ FI+V+
Sbjct: 425 EKSDTIKS-DVVSEIRAEVKEDIIKSEAAVSEERATAPKTDF---KVLGQIFDSFILVER 480
Query: 228 DSDLFIIDQHATDEKYNFETLQK---TTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYK 284
D I DQH E+ +E L+K T + Q+L+VP + L + ++ +N+ F
Sbjct: 481 DGVFEIYDQHIVHERILYEKLKKEYYGTNVSRQQLLVPLRITLDLRERELIFENIEYFTA 540
Query: 285 NGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFAS 344
GFE D D+ V++ S+P+ + D E +F N E+ ++ S
Sbjct: 541 FGFE--IDEFDENEVVIRSVPV-----MNFRDSTENIFRNIIKNLKENKETDIRESIIIS 593
Query: 345 RACRKSVMIGRALSVGEMTGLVRNMGRIDQ 374
+C+ ++ L++ EM ++R + I +
Sbjct: 594 MSCKGAIKANEKLTLHEMETIIRRLHEIGE 623
>gi|282850162|ref|ZP_06259541.1| DNA mismatch repair protein, C-terminal domain protein [Veillonella
parvula ATCC 17745]
gi|282579655|gb|EFB85059.1| DNA mismatch repair protein, C-terminal domain protein [Veillonella
parvula ATCC 17745]
Length = 679
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 96/423 (22%), Positives = 172/423 (40%), Gaps = 77/423 (18%)
Query: 1 MKLVNEVYHQF---NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHI 57
MK ++ YH N H P ++LNI + VD+NV P K ++ +K++ V I
Sbjct: 265 MKAIDNAYHALLPKNGH--PLVVLNITVPARMVDINVHPRKSEVKFSDDKIIFKAVYHGI 322
Query: 58 ---------------TDSYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETI 102
+ SY G N++ D +S+ D++ SNS + T
Sbjct: 323 LNALNNPLHERYERESSSYMTGTVA---NISDKYGNDIASNSDIKNFS-SNSTFLAGNTT 378
Query: 103 PVPSEDNSNFSHEANLQQSPETVEPDTP-----------------DETIEVIDDM----- 140
S H++ QS E + ET + ++++
Sbjct: 379 -YDSYQAPTVVHDS--MQSAEHIATAIDYDKVFGGRRTKGYEVMRGETSQFVENLKTKGY 435
Query: 141 --PRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKNKEAES 198
P + +Y QS+ V S + + + Y V+ +F + +N+E E
Sbjct: 436 TPPAPKATYEQSSFVDESFEAVPTAYTS-YTSEDVE--------KFKSLSHDIRNEEIE- 485
Query: 199 ELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTT-LIKSQ 257
R I+ S F M GQ +I+ K DL+IIDQHA E+ ++ L K++ I Q
Sbjct: 486 --ERTIQNSGFLPM---GQVASCYILAKKGDDLYIIDQHAAHERVRYDKLCKSSESIPMQ 540
Query: 258 KLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDI 317
++VPQ T ++++ GF+ + L P+ + E I
Sbjct: 541 SILVPQYSEATNDEMNLVEEERETLLDLGFDVELGGPT--KIKLVGAPVDLVESKAFE-I 597
Query: 318 EELLFMLQHTNSTEHCRPSRIR---AMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQ 374
+ +F H +H +P++ + M A +CR ++ G L++ +MT L+ ++ ++
Sbjct: 598 LQYIFSYLH----DHQQPTKAQLRHEMLAYASCRGAIKAGHNLNMYQMTTLIEDLFSTEK 653
Query: 375 PWV 377
P+V
Sbjct: 654 PYV 656
>gi|448734873|ref|ZP_21717093.1| DNA mismatch repair protein MutL [Halococcus salifodinae DSM 8989]
gi|445799503|gb|EMA49882.1| DNA mismatch repair protein MutL [Halococcus salifodinae DSM 8989]
Length = 724
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 93/412 (22%), Positives = 162/412 (39%), Gaps = 54/412 (13%)
Query: 3 LVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYA 62
+V Q +YPF +L + + D++DVNV P KR+I E + V+ + D+
Sbjct: 298 IVEAYGGQLAPDRYPFTVLFLSLPADTIDVNVHPRKREIRFADEADVREQVRTAVEDALM 357
Query: 63 I-GFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPV-PSEDN-----SNFSHE 115
G G +S + E+E E+ P +D S+ S +
Sbjct: 358 REGVVRSGAPRGRSA---------------PDQTEIEPESGDAGPPDDGGESARSDRSTD 402
Query: 116 ANLQQSPETVEPDTPDETIEVIDDM--------PRLQGSYRQST-----PV----TLSLD 158
A+ S T PD D T +DD P G ST P T +
Sbjct: 403 ADDSASRSTEPPDARDTTRTDLDDSGTETTGTEPADAGPEHPSTNESNVPTGPEPTEAET 462
Query: 159 IIQDQLKARYARRTV----QAQDRCVENRFHANIDPSKNKEAESEL----NRVIKKSMFE 210
+ DQ AR + A D + +P K + + +RV F+
Sbjct: 463 TVSDQTAGDAAREPIGEPPAAGDNDAGDGSRRPAEPGKFTDVAEQTTLAGDRVPDDHAFD 522
Query: 211 KM---KIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKS--QKLVVPQNL 265
++ +++GQ + +I + L +IDQHA DE+ N+E L++ ++ Q+L P +
Sbjct: 523 RLPRLRVLGQLHDTYIACESPDGLVLIDQHAADERINYERLRERVAGETAIQELADPVEI 582
Query: 266 HLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQ 325
LT + + + GFE S +DD V + ++P + + + ++L
Sbjct: 583 ELTAAEVELFESFADALAELGFEAS--RADDRTVEVRAVPAVLDGAADPDRLRDVLSGFV 640
Query: 326 HTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPWV 377
E A+ A AC S+ +L+ G++ L+R + + P+
Sbjct: 641 GDEEPEASIERDADALLADLACYPSITGNTSLAEGDVIDLLRTLDDCENPYA 692
>gi|302874907|ref|YP_003843540.1| DNA mismatch repair protein MutL [Clostridium cellulovorans 743B]
gi|307690473|ref|ZP_07632919.1| DNA mismatch repair protein MutL [Clostridium cellulovorans 743B]
gi|302577764|gb|ADL51776.1| DNA mismatch repair protein MutL [Clostridium cellulovorans 743B]
Length = 658
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 96/401 (23%), Positives = 183/401 (45%), Gaps = 66/401 (16%)
Query: 5 NEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQI-FMDHE---KLLLATVKVHITDS 60
N V F ++YPF I+ +++ + +DVNV P K +I F D K++ T+ + D
Sbjct: 270 NAVKSFFMVNKYPFFIIFLDIYPEFLDVNVHPTKAEIKFQDESRIFKIVFDTIHKVVRD- 328
Query: 61 YAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPV-------PSE---DNS 110
+ +D + D E+I N + + +PV P+E +++
Sbjct: 329 ---------------LVKDDFLETDKEEI---NEKPIMQVKLPVDLKAPEIPTEVLVNSN 370
Query: 111 NFSHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQST--PVTLSLDI------IQD 162
N + + N + ++ D ET + D R+ + + T T+S D+ ++
Sbjct: 371 NKNPKENNYLDYQILQNDKSQETQK--QDNIRIDSAQEKDTLWNTTISQDVNSEIAVKEN 428
Query: 163 QLKARYARRTVQAQDRCVENRFHANIDPSK-NKEAESELNRVIKKSMFEKMKIVGQFNLG 221
++ Y + +V+ E+ +I+ + N SE+ V K F M+I+GQ++
Sbjct: 429 EINTSYNKSSVE------ESVAKVSIEKEEVNDFTNSEIKPVEK---FPMMRIIGQYSNT 479
Query: 222 FIIVKYDSDLFIIDQHATDEKYNFETL---QKTTLIKSQKLVVPQNLHLTKINQCILKDN 278
+I+++ L+++DQHA EK FE K + + SQ L++P+ + +T + I K+N
Sbjct: 480 YILMEGYDGLYLVDQHAAHEKIIFEKYIKEMKLSKVVSQILMLPEVIEMTPYDFSIYKEN 539
Query: 279 LPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRI 338
+F K G F + + V + +P+ LGR ++E LF N + S +
Sbjct: 540 HEMFTKAG--FLIEDFGENTVSVREVPV----FLGRPVVKE-LFTNILDNLKNYGSGSTL 592
Query: 339 RAMF---ASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+ A+ AC+ ++ L + EM L+ + ID+P+
Sbjct: 593 EVKYYKIATLACKSAIKANDNLDIREMIALIEELRFIDEPF 633
>gi|293609402|ref|ZP_06691704.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|427426523|ref|ZP_18916575.1| DNA mismatch repair protein MutL [Acinetobacter baumannii WC-136]
gi|292827854|gb|EFF86217.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|425696680|gb|EKU66384.1| DNA mismatch repair protein MutL [Acinetobacter baumannii WC-136]
Length = 649
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 83/373 (22%), Positives = 155/373 (41%), Gaps = 57/373 (15%)
Query: 11 FNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGN 70
+ HQ+ +L +E+ +++DVNV P K +I +++ + V+ + ++ A F
Sbjct: 288 LHGHQHSSYLLFLEVDPENIDVNVHPTKHEIRFLNQREVHEFVRHYAKETLA-QFQTASA 346
Query: 71 NMNQSMEQDPSSDVDME---KIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEP 127
++ Q+M+ D SSD ++ K Q S +ET+ N EA Q +P +
Sbjct: 347 DLAQAMKADESSDYSVQPQPKYQEQFSLHRANETL--------NSDSEARTQPAPTELLT 398
Query: 128 D---TPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRF 184
D + + + D P+ GS + + + L ++DQ
Sbjct: 399 DFNASRPKAVHYADQTPKYNGSAQLNNALKTYLAPLRDQ--------------------- 437
Query: 185 HANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYN 244
P+ N ++ V K F + Q + +I+ + L I+D HA E+
Sbjct: 438 -----PT-NFSVNEDIEPVAKVDEFPLGIAIAQLHGIYILAQNTEGLIIVDMHAAHERIL 491
Query: 245 FETLQ----KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVL 300
+ ++ K SQ+L++P+ + ++++ +++ P + G E D D V+
Sbjct: 492 LQQMKNAWDKPEFWTSQQLLIPKVISISRMQAVRVEELKPQLERLGLE--IDLYGDEQVI 549
Query: 301 LTSLPMSKNTTLGREDIE----ELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRA 356
+ +P L + D E ELL L + + R + A AC +V R
Sbjct: 550 VRGVP----AILQKADFENLIPELLNDLDPNDEAQGLLQKR-DELLAGMACHGAVRAHRQ 604
Query: 357 LSVGEMTGLVRNM 369
LS+ EM L+R M
Sbjct: 605 LSLSEMNALLRQM 617
>gi|363897252|ref|ZP_09323791.1| hypothetical protein HMPREF9624_00353 [Oribacterium sp. ACB7]
gi|361958749|gb|EHL12046.1| hypothetical protein HMPREF9624_00353 [Oribacterium sp. ACB7]
Length = 686
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 84/384 (21%), Positives = 174/384 (45%), Gaps = 27/384 (7%)
Query: 14 HQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMN 73
H++PF IL ++++ + VDVNV P K ++ + + V + + + +D N ++
Sbjct: 286 HKFPFAILFLDLTPNLVDVNVHPQKLEVRFQNRDSIYQAVFNSVNKTLSEANLIDENPLS 345
Query: 74 QSM-EQDPSSDVDMEKIQRSNSEE-VEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPD 131
+ E+ + E + R SEE + T SE + + + + + V+P +
Sbjct: 346 VFLKEEKKKVEFQSELLLRKESEERAQGLTKDRASEVPKDTERKQENEGTEKPVQPVRYE 405
Query: 132 ETIEVIDDMPRLQ-GSYRQST-------PVTLSLDIIQDQLKARYARRTVQAQDRCVEN- 182
E ++ + +Q GSY Q TL D++ Q Q++ +N
Sbjct: 406 E-FDLTKGLNSIQEGSYSQEKNSFASEKTFTLKEDVVSSQSFGVDKVFDTAFQEKKKDNT 464
Query: 183 ----RFHANIDPSKNKEAESELNRVIKKSMFEKM--KIVGQFNLGFIIVKYDSDLFIIDQ 236
R H + + KE + L S ++ +I+G+ + +++Y + L+I+DQ
Sbjct: 465 PSPEREHLRNEAKETKEGQESLFTAPFLSEEARLSHRIIGEVFQTYWLIEYGNSLYIMDQ 524
Query: 237 HATDEKYNFETL---QKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDS 293
HA EK NFE + +K + SQ ++P ++HL+ + +L++ F + G+ +
Sbjct: 525 HAAHEKINFERMMRRKKEKDVFSQN-IIPLSIHLSTGEREVLEEYKKEFLEMGYLW---E 580
Query: 294 SDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMI 353
+ + LT++P+ T E + E+L L ++ I AS +C+ +V
Sbjct: 581 EEPNGISLTAIPVDFPTVRQEEVLLEILDGLMEDSAI--LEGESIYNKIASMSCKAAVKG 638
Query: 354 GRALSVGEMTGLVRNMGRIDQPWV 377
+ +SV E +++ + +++ P+
Sbjct: 639 NQKISVAECDTILQELLQLENPFA 662
>gi|182419526|ref|ZP_02950776.1| DNA mismatch repair protein MutL [Clostridium butyricum 5521]
gi|182376613|gb|EDT74187.1| DNA mismatch repair protein MutL [Clostridium butyricum 5521]
Length = 686
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 90/180 (50%), Gaps = 17/180 (9%)
Query: 205 KKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQK---TTLIKSQKLVV 261
K + F + I+GQ+N +I+ +YD L++IDQHA EK FE K + I Q L++
Sbjct: 491 KIAKFPPISIIGQYNKTYILGEYDGTLYMIDQHAAHEKIYFEKYLKDIESGDIIVQPLMI 550
Query: 262 PQNLHLTKINQCILKDNLPVFYKNGF---EFSFDSSDDGNVLLTSLPMSKNTTLGREDIE 318
P + LT + ++N +F GF EF S + L +P LG+ + +
Sbjct: 551 PSIIDLTIDDYSYFEENKEIFKDAGFILEEFGGTS-----IALKEVPY----FLGKLNPK 601
Query: 319 ELLF-MLQHTNSTEHCRPSRIR-AMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+L +L + + + + + ++ A++AC+ ++ L + EM L+ ++ ID P+
Sbjct: 602 KLFIEILDNLKNLGNGKTTEVKHNAIATKACKSAIKGNDELQINEMVKLIEDLRYIDDPF 661
>gi|406039401|ref|ZP_11046756.1| DNA mismatch repair protein MutL family protein [Acinetobacter
ursingii DSM 16037 = CIP 107286]
Length = 649
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 78/371 (21%), Positives = 157/371 (42%), Gaps = 52/371 (14%)
Query: 11 FNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGN 70
+ HQY +L +E+ + +DVNV P K +I +++ + V+ + ++ A F
Sbjct: 287 LHGHQYAGYLLFLEVDPEQIDVNVHPTKHEIRFLNQREVHEFVRHYAKETLA-QFQTAST 345
Query: 71 NMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPD-- 128
++ Q+M+ D + + + +E F+ NL SP +
Sbjct: 346 DLAQAMKADEQVTSALNTVIQPRYQE--------------QFALHKNLDTSPRVSDQSET 391
Query: 129 TPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANI 188
TP+ +IE++ D + S P I+Q ++RY T + N +
Sbjct: 392 TPELSIELLTD-------FNASRP-----QIVQYSPQSRYNGST------QLNNALKTYL 433
Query: 189 DPSKNKEAESELNRVIKKSMFEKMKI---VGQFNLGFIIVKYDSDLFIIDQHATDEKYNF 245
P + + +++E + + S ++ + + Q + +I+ + L I+D HA E+
Sbjct: 434 SPLR-ESSDTEHDTSVTSSSVDEFPLGIAIAQLHGIYILAQNTEGLIIVDMHAAHERILL 492
Query: 246 ETLQ----KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLL 301
+ ++ K SQ+L++P+ + ++++ ++D + G E D D V++
Sbjct: 493 QQMKSAWDKPEFWTSQQLLIPKIITISRMQATRIEDLKNQLLRLGLE--IDQYGDEQVIV 550
Query: 302 TSLPMSKNTTLGREDIEELLFMLQH---TNSTEHCRPSRIRAMFASRACRKSVMIGRALS 358
+P L + D ++L+ L H N + + A AC +V R LS
Sbjct: 551 RGVP----AILQKADFDKLIPELLHDLDPNDEAQALMQKRDQILAGMACHGAVRAHRMLS 606
Query: 359 VGEMTGLVRNM 369
+ EM L+R M
Sbjct: 607 LSEMNALLRQM 617
>gi|331269501|ref|YP_004395993.1| DNA mismatch repair protein hexb [Clostridium botulinum BKT015925]
gi|329126051|gb|AEB75996.1| DNA mismatch repair protein hexb [Clostridium botulinum BKT015925]
Length = 643
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 96/201 (47%), Gaps = 15/201 (7%)
Query: 183 RFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEK 242
+ N + N E++ + + + + F K+ ++GQFN +I+ + ++IDQHA EK
Sbjct: 426 KIDTNCKTTNNNESKEQSETLEQIAKFPKLNVIGQFNKTYILAQTLDVFYMIDQHAAHEK 485
Query: 243 YNFETLQ---KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNV 299
FE + K + SQ L+ P + ++ + DN +F ++G FS + D +
Sbjct: 486 ILFEKFRNQIKNRDVISQILLTPVVIEMSAEDFAYYSDNKNIFEESG--FSVELFGDNTI 543
Query: 300 LLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRA----MFASRACRKSVMIGR 355
+ PM LG+ ++ F L+ + ++ I M AS AC+ ++
Sbjct: 544 SIREAPM----LLGKVSTKD--FFLEILDDIKNMGNGNIEEVKHNMIASLACKAAIKANH 597
Query: 356 ALSVGEMTGLVRNMGRIDQPW 376
+LS EM+ LV + I++P+
Sbjct: 598 SLSYEEMSSLVEELRYIEEPF 618
>gi|359412948|ref|ZP_09205413.1| DNA mismatch repair protein mutL [Clostridium sp. DL-VIII]
gi|357171832|gb|EHJ00007.1| DNA mismatch repair protein mutL [Clostridium sp. DL-VIII]
Length = 662
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 88/178 (49%), Gaps = 17/178 (9%)
Query: 207 SMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQK---TTLIKSQKLVVPQ 263
+ F + I+GQ+N +I+ +YD L++IDQHA EK FE K I Q L+VP
Sbjct: 469 AKFPPISIIGQYNKTYILGEYDGTLYMIDQHAAHEKILFEKYLKEIENGTIIIQPLIVPS 528
Query: 264 NLHLTKINQCILKDNLPVFYKNGF---EFSFDSSDDGNVLLTSLPMSKNTTLGREDIEEL 320
+ L+ + ++N +F + GF EF S + L +P LG+ + + L
Sbjct: 529 IIDLSMDDYSYFEENKEIFKQAGFLLEEFGGTS-----LSLKEVPY----FLGKLNPKSL 579
Query: 321 LF-MLQHTNSTEHCRPSRIR-AMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+L + + + + S ++ A++AC+ ++ L V EM L+ ++ ID P+
Sbjct: 580 FLDILDNLKNLGNGKTSEVKHNAIATKACKAAIKGNDKLEVNEMIKLIEDLRFIDDPF 637
>gi|403046768|ref|ZP_10902237.1| DNA mismatch repair protein [Staphylococcus sp. OJ82]
gi|402763464|gb|EJX17557.1| DNA mismatch repair protein [Staphylococcus sp. OJ82]
Length = 649
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 161/378 (42%), Gaps = 48/378 (12%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMNQ 74
++P +NIEM VDVNV P K ++ + E L + I +++ + N+MN+
Sbjct: 279 RFPICYINIEMDPILVDVNVHPTKLEVRLSKEDQLFELIVEKIREAFKDRILIPQNDMNK 338
Query: 75 SMEQDPSSD------VDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPD 128
+++ D +D EK R + H T N NF + N Q ET + +
Sbjct: 339 LTQKNKVLDKFEQQKIDFEK--RKQQRDATHST-------NLNFDLDDN--QPNETKQSN 387
Query: 129 -TPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHAN 187
+ D T+ + P S ++S YA+ + E
Sbjct: 388 QSLDNTLSSPNTTPDDSYSVQESN--------------YDYAKTQRDVLNDMEEQDITDT 433
Query: 188 IDPSKNKEAESELNRVIKKSMFEK---MKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYN 244
+ PS++ S++ I + ++ M++VGQ + +II + ++ +F+IDQHA E+
Sbjct: 434 LAPSEDVAEASDIKGSISSNPSQRIPYMEVVGQVHGTYIIAQNENGMFMIDQHAAQERIK 493
Query: 245 FETLQKTTLIKS---QKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFS-FDSSDDGNVL 300
+E ++ S Q L++P H +K I+ ++ K G F +D +
Sbjct: 494 YEYFREKIGDVSNEIQNLLIPLTFHFSKDELMIINQHVEELDKVGVHLEPFGGND---YI 550
Query: 301 LTSLPMSKNTTLGREDIEELL-FMLQHTNSTEHCRPSRIRAMFA-SRACRKSVMIGRALS 358
+ S P+ E I++++ ++L+H + +IR A +C+KS+ L
Sbjct: 551 VDSYPVWFPAAEAEEIIKDMIEYVLEH----KKVNVKKIREEAAIMMSCKKSIKANHYLK 606
Query: 359 VGEMTGLVRNMGRIDQPW 376
EM LV + + P+
Sbjct: 607 NNEMADLVNQLRETEDPF 624
>gi|418576315|ref|ZP_13140461.1| DNA mismatch repair protein [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
gi|379325377|gb|EHY92509.1| DNA mismatch repair protein [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
Length = 655
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 85/377 (22%), Positives = 158/377 (41%), Gaps = 40/377 (10%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNM-- 72
+YP +NIEM VDVNV P K ++ + E L + I +++ + N+M
Sbjct: 279 RYPICYINIEMDPILVDVNVHPTKLEVRLSKEDQLFNLIVEKIREAFKDRILIPQNDMDK 338
Query: 73 ----NQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPD 128
N+ ++Q +D EK Q+ E+ + PV S D + + S EP
Sbjct: 339 ITKKNKVLDQFEQQKLDFEKKQQQ-----ENHSQPVNSHDEDEKNDDKAYHSSQTHYEP- 392
Query: 129 TPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANI 188
D + + + + ST D Q Q Y + + E F ++I
Sbjct: 393 --------TDYILKEENTTSVSTSPNSDDDYTQTQKSVLYDLENEKQSEFINEADFDSDI 444
Query: 189 DPSKNKEAESELNRVIKK---SMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNF 245
+ ++S++ + K M++VGQ + +II + ++ +++IDQHA E+ +
Sbjct: 445 ----SNHSDSDIKGSVSKDPSCRVPYMEVVGQVHGTYIIAQNENGMYMIDQHAAQERIKY 500
Query: 246 ETLQKT---TLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFS-FDSSDDGNVLL 301
E ++ + Q L++P H + I+ + K G F +D ++
Sbjct: 501 EYFREKIGEVTNEIQNLLIPLTFHFSTDELMIINQHKEELDKVGVHLEPFGGND---YIV 557
Query: 302 TSLPMSKNTTLGREDIEELL-FMLQHTNSTEHCRPSRIRAMFA-SRACRKSVMIGRALSV 359
S P+ T E I++++ ++L+H + +IR A +C+KS+ L
Sbjct: 558 DSYPVWFPTAEAEEIIKDMIEYVLEH----KKVNVKKIREDAAIMMSCKKSIKANHYLKN 613
Query: 360 GEMTGLVRNMGRIDQPW 376
EM LV + + P+
Sbjct: 614 NEMADLVNQLRETEDPF 630
>gi|290968594|ref|ZP_06560132.1| DNA mismatch repair protein, C-terminal domain protein [Megasphaera
genomosp. type_1 str. 28L]
gi|335049319|ref|ZP_08542318.1| DNA mismatch repair protein MutL [Megasphaera sp. UPII 199-6]
gi|290781247|gb|EFD93837.1| DNA mismatch repair protein, C-terminal domain protein [Megasphaera
genomosp. type_1 str. 28L]
gi|333763456|gb|EGL40905.1| DNA mismatch repair protein MutL [Megasphaera sp. UPII 199-6]
Length = 632
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 90/391 (23%), Positives = 163/391 (41%), Gaps = 62/391 (15%)
Query: 1 MKLVNEVYHQ-FNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITD 59
K ++ YH YPF +L+I++ ++DVNV P K +I EK + V I
Sbjct: 267 FKAIDNAYHAMLPKAGYPFALLHIQLDPAALDVNVHPAKTEIKFADEKAVYRAVYHAI-- 324
Query: 60 SYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQR---SNSEEVEHETIPVPSEDNSNFSHEA 116
+G V +++P E+I R ++S +++H E ++F
Sbjct: 325 ---VGALV--------AQEEP------ERIARPIAADSRQLQHR-----EEAAADFVR-- 360
Query: 117 NLQQSPETVE-------PDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYA 169
Q PE V P+ P+E R GS Q++ S ++++ + Y
Sbjct: 361 --TQEPERVWEPTALTLPEIPEERRSAGYAAHR--GSALQASAPVAS---VRERRENPYT 413
Query: 170 RRTVQAQDRCVE-NRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYD 228
+D V + A P E E + V +G +II K
Sbjct: 414 AAPGTERDFSVALHAGEATTRPDAQIHFEEETDFVP----------LGAVADCYIIAKKG 463
Query: 229 SDLFIIDQHATDEKYNFETL-QKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGF 287
DL+IIDQHA E+ ++ ++ + SQ+L+ P+ + + + +L + +F K G+
Sbjct: 464 RDLYIIDQHAAHERVRYDRFCRQMENVPSQQLLTPEFVEADETDMVLLTEQRELFRKLGY 523
Query: 288 EFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIR-AMFASRA 346
+S + + + +P G E E L + + +H + IR A A
Sbjct: 524 TYS--EAGPTTIRIEEVPADLP---GGEIKESLQTICRGLRENKHWDKATIRHRALAYMA 578
Query: 347 CRKSVMIGRALSVGEMTGLVRNMGRIDQPWV 377
CR ++ G +++ EM L+ ++ R ++P+V
Sbjct: 579 CRGAIKAGDKITIREMQKLLEDLFRTEKPFV 609
>gi|322421005|ref|YP_004200228.1| DNA mismatch repair protein MutL [Geobacter sp. M18]
gi|320127392|gb|ADW14952.1| DNA mismatch repair protein MutL [Geobacter sp. M18]
Length = 665
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 80/175 (45%), Gaps = 20/175 (11%)
Query: 209 FEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL---IKSQKLVVPQNL 265
F + ++GQFN +I+ + +DL +IDQHA E+ FE L+ + + SQ L+ P+ L
Sbjct: 474 FSSLAVIGQFNASYILCQRGTDLVLIDQHAAHERVAFEKLKGEFVGREVDSQGLLFPETL 533
Query: 266 HLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQ 325
L+ +L++++ + G FSF+ LL +P + T I ++L L
Sbjct: 534 ELSFRESAVLREHVEELRRLG--FSFEEFGGNTWLLNGVPQILSGTQYLRTIRDILEELA 591
Query: 326 HTNSTEHCRPSRIRA-------MFASRACRKSVMIGRALSVGEMTGLVRNMGRID 373
SR R + A AC V R L+ E++ L R M + D
Sbjct: 592 SL--------SRSRTFTDIQEDLLARIACHSVVRGRRTLTPLEISALFRQMDQTD 638
>gi|58697600|ref|ZP_00372810.1| DNA mismatch repair protein MutL-1 [Wolbachia endosymbiont of
Drosophila simulans]
gi|58535895|gb|EAL59672.1| DNA mismatch repair protein MutL-1 [Wolbachia endosymbiont of
Drosophila simulans]
Length = 187
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 78/153 (50%), Gaps = 12/153 (7%)
Query: 222 FIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPV 281
+II + L I+DQHA E+ +E L++ + IK QKL++P+ + + NQ + + + +
Sbjct: 11 YIIAEVRDKLIIVDQHAAHERLVYECLKQKSSIKRQKLLLPETVEIK--NQAGM-EMIEI 67
Query: 282 FYKNGFEFSFD--SSDDGNVLLTSLPMSKNTTLGREDIEELLF-MLQHTNSTEHCRP--S 336
+ FE FD + V++ +P LG D++E+L ++ E P
Sbjct: 68 YKDKLFEMGFDIEIKSENKVIVKEIP----AILGAIDVKEMLINIIDRLTEIEDTLPVED 123
Query: 337 RIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
++ + A+ AC S+ GR + + EM L+R M
Sbjct: 124 KVNKILATIACHGSIRAGRKMRLDEMNELLRQM 156
>gi|335046986|ref|ZP_08540009.1| DNA mismatch repair protein MutL [Oribacterium sp. oral taxon 108
str. F0425]
gi|333760772|gb|EGL38329.1| DNA mismatch repair protein MutL [Oribacterium sp. oral taxon 108
str. F0425]
Length = 704
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 86/401 (21%), Positives = 177/401 (44%), Gaps = 43/401 (10%)
Query: 14 HQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMN 73
H++PF IL ++++ + VDVNV P K ++ + + V + + + +D N ++
Sbjct: 286 HKFPFAILFLDLTPNLVDVNVHPQKLEVRFQNRDSIYQAVFNSVNKTLSEANLIDENPLS 345
Query: 74 QSM-EQDPSSDVDMEKIQRSNSEE-------------VEHETIPVPSE---DNSNFSHEA 116
+ E+ ++ E + R SEE V+ VP + + F +
Sbjct: 346 VFLKEEKKKAEFQPELLLRKESEERAQGLTKDRVQGLVKDRASEVPKDITYPETVFRQKE 405
Query: 117 NLQQSPETVEPDTP--DETIEVIDDMPRLQ-GSYRQST-------PVTLSLDIIQDQLKA 166
Q++ +P P E ++ + +Q GSY Q TL D++ Q
Sbjct: 406 EKQEAGVLEKPVQPVRYEEFDLTKGLNSIQEGSYSQEKNSFASEKTFTLKEDVVSSQSFG 465
Query: 167 RYARRTVQAQDRCVEN-----RFHANIDPSKNKEAESELNRV--IKKSMFEKMKIVGQFN 219
Q++ +N R H + + KE + L + + +I+G+
Sbjct: 466 VDKVFDTAFQEKKKDNTPSPEREHLRNEAKETKEGQESLFTAPFLSEEARISHRIIGEVF 525
Query: 220 LGFIIVKYDSDLFIIDQHATDEKYNFETL---QKTTLIKSQKLVVPQNLHLTKINQCILK 276
+ +++Y + L+I+DQHA EK NFE + +K + SQ ++P ++HL+ + +L+
Sbjct: 526 QTYWLIEYGNSLYIMDQHAAHEKINFERMMRRKKEKDVFSQN-IIPLSIHLSTGEREVLE 584
Query: 277 DNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPS 336
+ F + G+ + +S+ + LT++P+ T E + E+L L ++
Sbjct: 585 EYKKEFLEMGYLWEEESN---GISLTAIPVDFPTVRQEEVLLEILDGLMEDSAI--LEGE 639
Query: 337 RIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPWV 377
I AS +C+ +V + +SV E +++ + +++ P+
Sbjct: 640 SIYNKIASMSCKAAVKGNQKISVAECDTILQELLQLENPFA 680
>gi|409723405|ref|ZP_11270657.1| DNA mismatch repair protein MutL [Halococcus hamelinensis 100A6]
gi|448722522|ref|ZP_21705056.1| DNA mismatch repair protein MutL [Halococcus hamelinensis 100A6]
gi|445789247|gb|EMA39936.1| DNA mismatch repair protein MutL [Halococcus hamelinensis 100A6]
Length = 701
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 93/414 (22%), Positives = 158/414 (38%), Gaps = 66/414 (15%)
Query: 4 VNEVYH-QFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYA 62
V E Y Q +YPF ++ + +S +SVDVNV P K ++ E VK + +
Sbjct: 280 VVEAYGGQLAPDRYPFAVVFLSISPESVDVNVHPRKLEVRFADESGATEQVKSAVESALL 339
Query: 63 -IGFTVDGNNMNQSM----EQDPSSD----------------VDMEKIQRSNSEEVEHET 101
G G +S E DP D VD + + S ++ ET
Sbjct: 340 DAGLVRSGAPRGRSAPEQTEIDPGDDGATNSAEPSSTPRDTNVDAPRAEPSTTDPEPVET 399
Query: 102 IPVP-----------SEDNSNFSHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQS 150
+ SE+ + A+L P T +P R QG+ S
Sbjct: 400 TEIEPSSAATGRDPESEETPTEATSADLSTEPST-DPSMESSADPAAPSSQRDQGNDGSS 458
Query: 151 TPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKNKEAESELN--RVIKKSM 208
TP + A R+ DR +F E ++ L+ RV +
Sbjct: 459 TPSN----------RTGEAERSPVGADR----KFSGG-------ETQTTLDGDRVADDAD 497
Query: 209 FEKM---KIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKS--QKLVVPQ 263
F+++ +++GQ + +++ + L ++DQHA DE+ N+E L++ + Q+L P
Sbjct: 498 FDRLPPLRVLGQLHDTYVVCESPDGLLLVDQHAADERVNYERLRERFAGDTGIQRLSSPI 557
Query: 264 NLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFM 323
+ LT + + GF DDG V +T++P E + + L
Sbjct: 558 EIELTPAESELFAEFENALAGLGFRADL---DDGRVEVTAVPAVLAGAADPELLRDALSA 614
Query: 324 LQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPWV 377
L E + A+ A AC SV +L+ G + L+ ++ + P+
Sbjct: 615 LVR-GKDEDVVEASADALLADLACYPSVTGNTSLTEGSVMELLASLDACENPYA 667
>gi|168186344|ref|ZP_02620979.1| DNA mismatch repair protein hexb [Clostridium botulinum C str.
Eklund]
gi|169295821|gb|EDS77954.1| DNA mismatch repair protein hexb [Clostridium botulinum C str.
Eklund]
Length = 647
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 78/383 (20%), Positives = 170/383 (44%), Gaps = 59/383 (15%)
Query: 14 HQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATV--KVHITDSYAIGFTVDGNN 71
+++PF +L +++ + +DVNV P K ++ E+++ V VH S +I D N
Sbjct: 279 NKFPFFVLFVDIYPEFIDVNVHPTKSEVKFQDERIIYKVVFDAVHSALSTSIK---DSFN 335
Query: 72 MNQ-SMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTP 130
+N+ S+ + ++ + + + E+VE IP+ ++ + S +L + V + P
Sbjct: 336 INKNSIFDNKDTNYKLMQDEVPKQEQVE---IPIDLQNKRSASIIESLPKFKPNVSYEEP 392
Query: 131 DET------------IEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDR 178
++ +++ +Y + + +II ++ +++ + +A D
Sbjct: 393 KDSCRENCFKNRDIKFNNTEELETPNINYENFMSASTTDNIICEKPQSK----STKATDT 448
Query: 179 CVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHA 238
C +S F ++ I+GQFN +I+ + ++IDQHA
Sbjct: 449 CTA-----------------------LESKFPRLNILGQFNKTYILAESSDTFYMIDQHA 485
Query: 239 TDEKYNFETLQ---KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSD 295
EK FE + + + SQ L+ P + + + +N+ +F+++G F +
Sbjct: 486 AHEKILFEKFKNQIENREVVSQILLTPVIIEMNAEDFVYYSENINIFHESG--FVTEIFG 543
Query: 296 DGNVLLTSLPMSKNTTLGREDIEELLF-MLQHTNSTEHCRPSRIR-AMFASRACRKSVMI 353
D + + PM LG+ + ++ +L + + ++++ M AS AC+ ++
Sbjct: 544 DNIINIREAPM----LLGKVNTKDFFLEILDDIKNMGNGNIAKVKHNMIASLACKAAIKA 599
Query: 354 GRALSVGEMTGLVRNMGRIDQPW 376
LS EM LV ++ I++P+
Sbjct: 600 NHTLSYEEMNSLVEDLRYIEEPF 622
>gi|258645505|ref|ZP_05732974.1| putative DNA mismatch repair protein MutL [Dialister invisus DSM
15470]
gi|260402859|gb|EEW96406.1| putative DNA mismatch repair protein MutL [Dialister invisus DSM
15470]
Length = 645
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 89/382 (23%), Positives = 165/382 (43%), Gaps = 31/382 (8%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K V+ YH + YP ++L + +S+DVNV P KR+I D E+ + V + ++
Sbjct: 266 KAVDNAYHSLLPKNGYPIMVLTFTLPPESIDVNVHPQKREIKFDDEQKIFRLVYHAVLNT 325
Query: 61 YAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQ 120
D ++ + M ++P+ V + E++ + V ED +H+ L +
Sbjct: 326 LTSQSAPD--SIVKDMIKEPAHQVPL-------GTELDLSKVVV--EDKQLGAHDIGLTE 374
Query: 121 SPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQ-DQLKARYARRTVQAQDRC 179
+ V+ P + Q S+ +S + D + + +R Q R
Sbjct: 375 ADGVVQKPQPSVPV---------QSSWNESFSSYGNRDFRKSEHAVSRSGTDFETKQTRS 425
Query: 180 -VENRFHANIDP-SKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQH 237
+ + I P ++ +AESE + + + +GQ FI+ ++ SDLFIIDQH
Sbjct: 426 EILSTTPVFIKPHEESMKAESEPLFEVPAEKDDPVIPLGQVADCFILCQHGSDLFIIDQH 485
Query: 238 ATDEKYNFETL-QKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDD 296
A E+ ++ KT I Q +++P + + + +L + K G +F+ +
Sbjct: 486 AAHERVRYDRFAAKTDGIPVQAILIPYLIDVEPEDMDLLFEKEEEIKKLG--ITFEQAGR 543
Query: 297 GNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIR-AMFASRACRKSVMIGR 355
+ +T P + I++LLF N P +R M A ACR ++ G
Sbjct: 544 DVIRITGAPEDFSENDMDRIIKDLLFTFHDENMPS---PETLRHRMMAYAACRGAIKRGD 600
Query: 356 ALSVGEMTGLVRNMGRIDQPWV 377
L+V +M L+ ++ +P+V
Sbjct: 601 PLNVRQMKELITDLFHTTRPFV 622
>gi|42521099|ref|NP_967014.1| DNA mismatch repair protein [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|42410840|gb|AAS14948.1| DNA mismatch repair protein MutL-1 [Wolbachia endosymbiont of
Drosophila melanogaster]
Length = 608
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 89/181 (49%), Gaps = 21/181 (11%)
Query: 203 VIKKSMFEKMKIVGQFNLGF---------IIVKYDSDLFIIDQHATDEKYNFETLQKTTL 253
V++K + E++ ++ LGF II + L I+DQHA E+ +E L++ +
Sbjct: 404 VLEKKVLEQVDLIESHPLGFARCQVYNTYIIAEVRDKLIIVDQHAAHERLVYECLKQKSS 463
Query: 254 IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFD--SSDDGNVLLTSLPMSKNTT 311
+K QKL++P+ + + NQ + + + ++ FE FD + V++ +P
Sbjct: 464 VKRQKLLLPETVEIK--NQAGM-EMIEIYKDKLFEMGFDIEIKPENKVIVKEIP----AI 516
Query: 312 LGREDIEELLF-MLQHTNSTEHCRP--SRIRAMFASRACRKSVMIGRALSVGEMTGLVRN 368
LG D++E+L ++ E P ++ + A+ AC S+ GR + EM L+R
Sbjct: 517 LGAIDVKEMLINIVDRLTEIEDTLPVEDKVNKILATIACYGSIRAGRKMRFEEMNVLLRQ 576
Query: 369 M 369
M
Sbjct: 577 M 577
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 4 VNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLL 49
V YH F + +YPF L++E+ D VDVNV P+K ++ ++KL+
Sbjct: 266 VRYAYHDFIPSDRYPFAALHLEIPYDQVDVNVHPNKSEVRFQNKKLI 312
>gi|148263827|ref|YP_001230533.1| DNA mismatch repair protein [Geobacter uraniireducens Rf4]
gi|189030400|sp|A5GEV5.1|MUTL_GEOUR RecName: Full=DNA mismatch repair protein MutL
gi|146397327|gb|ABQ25960.1| DNA mismatch repair protein MutL [Geobacter uraniireducens Rf4]
Length = 602
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 118/308 (38%), Gaps = 72/308 (23%)
Query: 4 VNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYA 62
V + Y F +YP ++L I + D VDVNV P K HE +VH A
Sbjct: 268 VLQAYRNFMERGRYPVVVLFITVPADEVDVNVHPTK------HEVRFREQGRVHDAIQAA 321
Query: 63 IGFTVDGNNM--NQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQ 120
+ + Q+ Q +S + + EV E + +S E +LQQ
Sbjct: 322 LESVLRATPWVRKQAAPQPFASPPPASEASATRVAEVR--------ETLARYSPEKHLQQ 373
Query: 121 SPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCV 180
S TV P + RQ V+L
Sbjct: 374 S-FTVPPAATFQ---------------RQQGAVSL------------------------- 392
Query: 181 ENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATD 240
P +E ++ ++ K + + ++GQFN +I+ + +DL IIDQHA
Sbjct: 393 ---------PVAAREDDTASDKTESKGYYCSLSVIGQFNAAYILCQDGTDLVIIDQHAAH 443
Query: 241 EKYNFETLQ---KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDG 297
E+ FE L+ ++SQ+L+ P+ + L+ L+++L + G FS +
Sbjct: 444 ERVAFEKLKAQFAAAQVESQRLLFPETIELSFKEGATLREHLAELGRLG--FSLEEFGGA 501
Query: 298 NVLLTSLP 305
LL ++P
Sbjct: 502 TWLLNAVP 509
>gi|291519453|emb|CBK74674.1| DNA mismatch repair protein MutL [Butyrivibrio fibrisolvens 16/4]
Length = 632
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 95/389 (24%), Positives = 164/389 (42%), Gaps = 61/389 (15%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHE----KLLLATVKVH 56
+ E Y+ F HQYPF ++NI + +VDVNV P K+++ ++E +LL T+
Sbjct: 266 RACEEGYYGFLMGHQYPFFVINIAFTDSAVDVNVHPTKQEVRFENESEVCQLLTKTI--- 322
Query: 57 ITDSYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNS-EEVEHETIPVPSEDNSNFSHE 115
N + E + +D I+++ ++ T+PV +E E
Sbjct: 323 -------------NQRLRRREDVLETHIDEPTIKQAPIIQQPTVSTVPVEAE----VKPE 365
Query: 116 ANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQA 175
N Q P V + EVI P TP D ++ ++++ A
Sbjct: 366 TNYQSIPAQVSATSS----EVIPPKP-------VKTPEPFEKDRLER------IKQSITA 408
Query: 176 Q---DRCVENRFHANIDPSKNKEAES-ELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDL 231
Q D E +F KN+ E E + K ++ KI+GQ + IV+YD ++
Sbjct: 409 QIHNDTPYEKKF-----AEKNRGGEKYEQISFLNKEAVKEHKIIGQVFDTYWIVEYDKNM 463
Query: 232 FIIDQHATDEKYNFETLQ---KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFE 288
+IIDQHA EK FE K + SQ + P + L+ + + ++ F K G+
Sbjct: 464 YIIDQHAAHEKVLFEKTMARLKNNQMTSQMISPPVIVSLSPQDVLLFENYREAFEKLGYR 523
Query: 289 FSFDSSDDGNVL-LTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRAC 347
S GN L + +P + + E+L Q +++ I AS +C
Sbjct: 524 V---ESFGGNELAINGIPGNLLNLDPKAFFLEVLADCQSYKASDSF--DMIIERVASMSC 578
Query: 348 RKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+ +V LS+ E+ L+ ++ ++ P+
Sbjct: 579 KAAVKGNNRLSIPEIKTLIDDLLELENPY 607
>gi|295110016|emb|CBL23969.1| DNA mismatch repair protein MutL [Ruminococcus obeum A2-162]
Length = 674
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 93/401 (23%), Positives = 159/401 (39%), Gaps = 47/401 (11%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K + Y F H++PF+ L +EM + +DVNV P KR++ E+ + V + +
Sbjct: 270 KAIENAYRGFLMQHKFPFVSLRMEMEGNDLDVNVHPAKREVRFAREQEVYDAVYDMVRSA 329
Query: 61 YAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEE-VEHETIPVPSEDNSNFSHEANLQ 119
E P VD + EE + +P P E N
Sbjct: 330 LT------------RKEMIPKVSVDSTPAKTETKEEKITRAAVPEPFETKRREEMYPNTV 377
Query: 120 QSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRC 179
+ PE P + D + R+ + I + A Y +A++
Sbjct: 378 RKPEVQASLNPKPEVR---DGSNARTEIRKPFSQGTQSETIVREPAAEYRPAFSEAEEEM 434
Query: 180 VENRFHAN--IDPSKNKEAESELNRVIKKS--------MFE----------KMKIVGQFN 219
N +D K K+AE +L +K +FE ++++VGQ
Sbjct: 435 FSGTLRENQKLDEEK-KQAELKLTEEPEKKQAPPQQLELFEEKLLAPESRSRIRVVGQIF 493
Query: 220 LGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL---IKSQKLVVPQNLHLTKINQCILK 276
+ +V+++ + +IIDQHA EK +E + K I SQ L P + L+ + +L
Sbjct: 494 DTYWLVQFEDNFYIIDQHAAHEKVYYERMVKQFREHSIDSQYLSPPMIVTLSMQEEEVLN 553
Query: 277 DNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDI-EELLFMLQHTNSTEHCRP 335
N F + GFE ++ ++++P S L ED+ E+L L NS +
Sbjct: 554 SNKDYFEQFGFE--IENFGGREYRISAVP-SNLYGLTEEDLFLEMLDNLSGNNSRDAL-- 608
Query: 336 SRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+ A+ AC+ +V A+S E L+ + +D P+
Sbjct: 609 DIFASKLATMACKAAVKGNHAMSFEEAEKLIDELLTLDNPY 649
>gi|410667730|ref|YP_006920101.1| DNA mismatch repair protein MutL [Thermacetogenium phaeum DSM
12270]
gi|409105477|gb|AFV11602.1| DNA mismatch repair protein MutL [Thermacetogenium phaeum DSM
12270]
Length = 575
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 82/169 (48%), Gaps = 8/169 (4%)
Query: 205 KKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIK---SQKLVV 261
++ F +M+++GQ +II + ++FIIDQHA E+ +E + K K +QKL V
Sbjct: 381 RQPFFREMRLIGQAQGLYIIAEKGDNIFIIDQHAAHERIRYEEIMKNMERKEYFAQKLSV 440
Query: 262 PQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELL 321
PQ + L+ + I DN + G+E + + L+ S+P N G+ E L
Sbjct: 441 PQEVRLSPEERIIYLDNKDLLKGVGYELK--EAGTSSFLIISVPPGLNDDPGQLFREMLE 498
Query: 322 FMLQHTNSTEHCRPSRIRAMFA-SRACRKSVMIGRALSVGEMTGLVRNM 369
+ Q E+ P + A AC+ +V G L+ GEM +++ +
Sbjct: 499 VLRQERGIREN--PMKFYEKVAMMSACKSAVKAGDILTTGEMRAILQQL 545
>gi|345004245|ref|YP_004807098.1| DNA mismatch repair protein mutL [halophilic archaeon DL31]
gi|344319871|gb|AEN04725.1| DNA mismatch repair protein mutL [halophilic archaeon DL31]
Length = 760
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 80/168 (47%), Gaps = 5/168 (2%)
Query: 212 MKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQK--TTLIKSQKLVVPQNLHLTK 269
M+++GQ + +++ + D L +IDQHA DE+ N+E LQ+ + SQ L P L LT
Sbjct: 563 MRVLGQLDDTYVVAETDGGLVLIDQHAADERVNYERLQRGFADGMTSQALAAPVALELTA 622
Query: 270 INQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNS 329
+ ++ + G F+ + D V +T++P +T L E ++++L ++
Sbjct: 623 REAELFTSHIDALSELG--FAAEQVDGRAVEVTAVPAVFDTALDPELLQDVLGAFVAGDA 680
Query: 330 TEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPWV 377
E + A AC SV +L+ G ++ L+ + P+
Sbjct: 681 AEALE-DVADELLADLACYPSVTGNTSLTEGSVSALLAALDDCANPYA 727
>gi|375135219|ref|YP_004995869.1| methyl-directed mismatch repair protein [Acinetobacter
calcoaceticus PHEA-2]
gi|325122664|gb|ADY82187.1| enzyme in methyl-directed mismatch repair, stimulates binding of
Vsr and MutS to heteroduplex DNA [Acinetobacter
calcoaceticus PHEA-2]
Length = 649
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 155/373 (41%), Gaps = 57/373 (15%)
Query: 11 FNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGN 70
+ HQ+ +L +E+ +++DVNV P K +I +++ + V+ + ++ A F
Sbjct: 288 LHGHQHSSYLLFLEVDPENIDVNVHPTKHEIRFLNQREVHEFVRHYAKETLA-QFQTASA 346
Query: 71 NMNQSMEQDPSSDVDME---KIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEP 127
++ Q+M+ D +SD ++ K Q S +ET+ N EA Q +P +
Sbjct: 347 DLVQAMKADENSDYSVQPQPKYQEQFSLHRANETL--------NSDSEARTQHAPTELLT 398
Query: 128 D---TPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRF 184
D + + I D P+ GS + + + L ++DQ + F
Sbjct: 399 DFNASHPQAIHYADQTPKYNGSAQLNNALKTYLAPLRDQPAS-----------------F 441
Query: 185 HANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYN 244
N D + V K F + Q + +I+ + L I+D HA E+
Sbjct: 442 SVNED----------VEPVAKVDEFPLGIAIAQLHGIYILAQNTEGLIIVDMHAAHERIL 491
Query: 245 FETLQ----KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVL 300
+ ++ K SQ+L++P+ + ++++ +++ P + G E D D V+
Sbjct: 492 LQQMKNAWDKPEFWTSQQLLIPKVISISRMQAVRVEELKPQLERLGLE--IDLYGDEQVI 549
Query: 301 LTSLPMSKNTTLGREDIE----ELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRA 356
+ +P L + D E ELL L + + R + A AC +V R
Sbjct: 550 VRGVP----AILQKADFENLIPELLNDLDPNDEAQGLLQKR-DELLAGMACHGAVRAHRQ 604
Query: 357 LSVGEMTGLVRNM 369
LS+ EM L+R M
Sbjct: 605 LSLSEMNALLRQM 617
>gi|253681623|ref|ZP_04862420.1| DNA mismatch repair protein MutL [Clostridium botulinum D str.
1873]
gi|253561335|gb|EES90787.1| DNA mismatch repair protein MutL [Clostridium botulinum D str.
1873]
Length = 637
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 93/193 (48%), Gaps = 15/193 (7%)
Query: 191 SKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQ- 249
+ N++ + +L+ + K F ++ I+GQFN +I+ + ++IDQHA EK FE +
Sbjct: 429 TNNEKGKKQLDTLDKVDKFPELNIIGQFNKTYILAQTLDIFYMIDQHAAHEKILFEKFRN 488
Query: 250 --KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMS 307
K + SQ L+ P + ++ + +N +F ++G FS + D + + PM
Sbjct: 489 QIKNRDVISQILLTPVVIEMSAEDFAYYSENKNIFEESG--FSLELFGDNTISIREAPM- 545
Query: 308 KNTTLGREDIEELLFMLQHTNSTEHCRPSRIRA----MFASRACRKSVMIGRALSVGEMT 363
LG+ + F L+ ++ ++ I M AS AC+ ++ LS EM
Sbjct: 546 ---LLGKVSTKN--FFLEILDNIKNMGKGNIEEVKHNMIASLACKAAIKANHTLSYDEMC 600
Query: 364 GLVRNMGRIDQPW 376
LV + I++P+
Sbjct: 601 SLVEELRYIEEPF 613
>gi|397779478|ref|YP_006543951.1| DNA mismatch repair protein mutL [Methanoculleus bourgensis MS2]
gi|396937980|emb|CCJ35235.1| DNA mismatch repair protein mutL [Methanoculleus bourgensis MS2]
Length = 586
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 83/177 (46%), Gaps = 13/177 (7%)
Query: 206 KSMFEKMKIVGQFNLGFIIVK-YDSDLFIIDQHATDEKYNFETL--QKTTLIKSQKLVVP 262
+++ MK VGQ +I+ + D L++IDQHA E+ ++ + ++ ++Q+L++P
Sbjct: 393 ENLLPAMKPVGQVAATYIVAEGADGTLYLIDQHAAHERILYDQVVERRDATPETQELIMP 452
Query: 263 QNLHLTKINQCILKDNLPVFYKNGF---EFSFDSSDDGNVLLTSLPMSKNTTLGREDIEE 319
L L L+D + V + GF EF D+ + +L ++ + RE I +
Sbjct: 453 AVLSLPPRESAALRDAMAVLAEEGFVVEEFGRDTFAV-RAVPAALGALEDPGVVRETIAD 511
Query: 320 LLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
LL TN P R A+ ACR +V G L+ + L+ + R PW
Sbjct: 512 LLTGASRTN------PDRREAVTCIVACRGAVKAGVLLTHDQQRRLLAQLARTKTPW 562
>gi|359401750|ref|ZP_09194716.1| DNA mismatch repair protein MutL [Novosphingobium pentaromativorans
US6-1]
gi|357596915|gb|EHJ58667.1| DNA mismatch repair protein MutL [Novosphingobium pentaromativorans
US6-1]
Length = 607
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 79/163 (48%), Gaps = 13/163 (7%)
Query: 216 GQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKT----TLIKSQKLVVPQNLHLTKIN 271
GQ + +I+ + L I+DQHA E+ E L+ +++SQ L++P+ + L ++
Sbjct: 422 GQVSGTYIVAEAQDGLVIVDQHAAHERLVLERLKAAGAEDAMVRSQALLLPEVVELEEVA 481
Query: 272 QCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQ---HTN 328
L+D + + F + +L+ ++P + LG+ D++ LL L N
Sbjct: 482 CDALEDRIDDMAR--FGLVLERFGPAAMLVRAVP----SVLGKTDVQGLLRDLADDLAKN 535
Query: 329 STEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGR 371
++ + A+ AC SV GR+L+V EM L+R M R
Sbjct: 536 GDALLLGEKLDLVLATMACHGSVRAGRSLTVAEMNALLREMER 578
>gi|336477854|ref|YP_004616995.1| DNA mismatch repair protein MutL [Methanosalsum zhilinae DSM 4017]
gi|335931235|gb|AEH61776.1| DNA mismatch repair protein MutL [Methanosalsum zhilinae DSM 4017]
Length = 588
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 83/173 (47%), Gaps = 19/173 (10%)
Query: 212 MKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKIN 271
++++GQ + +II K + L IIDQHA E+ +E L+ I SQ+L+ P L L+
Sbjct: 403 IEVMGQVDEIYIIGKMEDQLVIIDQHAAHERILYEQLKVKPNISSQELIAPVTLDLSPKE 462
Query: 272 QCILKDNLPVFYKNGFE-FSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLF-------M 323
+ ++++ +P GFE F F S + ++P + I +++ +
Sbjct: 463 RALVEEYIPYLESAGFEIFEFGPS---TYAVNAVPGVSDALEDPAVIPDIISDILSAGRI 519
Query: 324 LQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
T +EH R + ACR ++ G A S+ +M LV+ + ++ P+
Sbjct: 520 QDETGISEHIR--------KTMACRGAIKAGAACSMEQMVSLVQQLRKVSNPY 564
>gi|291534087|emb|CBL07200.1| DNA mismatch repair enzyme (predicted ATPase) [Megamonas
hypermegale ART12/1]
Length = 495
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 85/387 (21%), Positives = 172/387 (44%), Gaps = 42/387 (10%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K ++ YH YPF+ILNIE+++ ++D+NV P K +I + E LL T+
Sbjct: 114 KAIDNAYHSLLPKSGYPFVILNIEVNKRTIDINVHPQKAEIKFEDESLLFKTI------Y 167
Query: 61 YAIGFTVDGNNMNQSME--QDPSSDVDMEKIQRSNSEEVE---HETIPVPSEDN---SNF 112
+A+ V N+ NQ++ P +D + I+++ E++ E +P S ++ ++
Sbjct: 168 HAVLEAVKPND-NQALSDFAIPVTDKALH-IEKTVPEQINMDLSENMPSTSANSFKQNSI 225
Query: 113 SHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRT 172
+H ++L+ + TP T D+ + + + P +L + A +
Sbjct: 226 NHISSLKNN------TTPSTT-----DLNKFRQARETLHP---NLSNYHNNTVKETAVQN 271
Query: 173 VQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKY-DSDL 231
QA D + NI +N +++K+++ + +GQ + FI+ + + +
Sbjct: 272 YQA-DTTTNPQTDINISSKENLTDCQNSTQLLKEAV--NLTPIGQIDDCFIVAQGPNGGM 328
Query: 232 FIIDQHATDEKYNFETLQKTT-LIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFS 290
+IIDQHA E+ ++ K T I Q L++ L + ++++N + Y GF
Sbjct: 329 YIIDQHAAHERILYDKFAKQTERIPVQPLLMHLFLDVNNSELTLIEENQQILYDLGFNVE 388
Query: 291 FDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIR-AMFASRACRK 349
+ + L +P + E+L L ++ P IR + A AC+
Sbjct: 389 L--AGQNQIRLKEVPADIKPQESEDIFREILISLSQLHTP---TPQEIRHSCLAMTACKA 443
Query: 350 SVMIGRALSVGEMTGLVRNMGRIDQPW 376
++ G L++ +M ++ + + P+
Sbjct: 444 AIKAGDVLNITQMKIILNELAQTTLPY 470
>gi|426355435|ref|XP_004045128.1| PREDICTED: radial spoke head 10 homolog B2-like [Gorilla gorilla
gorilla]
Length = 327
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 301 LTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKS 350
L SLP SKN T G +D++EL+FML + CRPSR++ MFASRACRKS
Sbjct: 19 LISLPTSKNWTFGPQDVDELIFMLSDSPGVM-CRPSRVKQMFASRACRKS 67
>gi|399890151|ref|ZP_10776028.1| DNA mismatch repair protein [Clostridium arbusti SL206]
Length = 613
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/368 (21%), Positives = 163/368 (44%), Gaps = 57/368 (15%)
Query: 14 HQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMN 73
++YPF +L +++ + VDVNV P K ++ +++ + V + D+ N++
Sbjct: 273 NKYPFFVLFLDIYPEFVDVNVHPTKSEVKFQNDREIFKLVFDSVHDAIK-------NSLK 325
Query: 74 QSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPDET 133
+ + + S VDM I+ + E+ IP+ + SHE ++
Sbjct: 326 DNFDLEMESAVDM--IKEAPPLVKENVQIPIDFK-----SHEPPMK-------------- 364
Query: 134 IEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKN 193
I+D + + + T V S +D + + Y ++ + + + S N
Sbjct: 365 ---IEDKDNYKPEFIKPT-VDYSFKDKEDSVYSVYNKKETEGNADYLTD--------SIN 412
Query: 194 KEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL 253
K N I F ++I+GQ++ +I+ + D ++IDQHA EK FE K +
Sbjct: 413 K------NGSIPSPKFPDLRIIGQYHNTYILAESAEDFYLIDQHAAHEKILFEKYTKEIM 466
Query: 254 ---IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNT 310
+ +Q L+ P+ + +T + +N +F + G F+ + D V + +P T
Sbjct: 467 NGSVSAQILLTPEIIEMTPEDFIYYIENKDIFVRVG--FNIEVFGDNTVSIREVPNFLGT 524
Query: 311 TLGREDIEELLFMLQHTNS--TEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRN 368
+E ++ L++ S T + ++I A+ AC+ ++ L++ E+ L+ +
Sbjct: 525 PQLKELFSAMIDNLKNLGSGETHEVKYNKI----ATLACKAAIKANDRLNMEEIKALIDD 580
Query: 369 MGRIDQPW 376
+ ID+P+
Sbjct: 581 LRCIDEPF 588
>gi|410657247|ref|YP_006909618.1| DNA mismatch repair protein MutL [Dehalobacter sp. DCA]
gi|410660283|ref|YP_006912654.1| DNA mismatch repair protein MutL [Dehalobacter sp. CF]
gi|409019602|gb|AFV01633.1| DNA mismatch repair protein MutL [Dehalobacter sp. DCA]
gi|409022639|gb|AFV04669.1| DNA mismatch repair protein MutL [Dehalobacter sp. CF]
Length = 681
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 85/177 (48%), Gaps = 14/177 (7%)
Query: 207 SMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFET---LQKTTLIKSQKLVVPQ 263
S F ++K VGQ +I+ D +L+IIDQHA E+ +E+ L K + SQ L++P+
Sbjct: 488 SKFLELKAVGQVFHMYILAADDKNLYIIDQHAAHERIRYESLLRLAKRSEAASQLLLIPE 547
Query: 264 NLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKN----TTLGREDIEE 319
+ LT + IL + + G F F+ D L +P+ +N + + I+E
Sbjct: 548 TVELTVQEEQILLAHFDELH--GMGFIFEHFGDRTYFLRGVPLLENLESPGKMFKAFIDE 605
Query: 320 LLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+L + S E I + ACR +V L V EM +++ +GR D P+
Sbjct: 606 IL-NTSFSPSLEKLLEEWIMML----ACRSAVKGKERLMVQEMDEIIQKLGRADNPY 657
>gi|424744192|ref|ZP_18172490.1| DNA mismatch repair protein MutL [Acinetobacter baumannii WC-141]
gi|422942931|gb|EKU37962.1| DNA mismatch repair protein MutL [Acinetobacter baumannii WC-141]
Length = 649
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 151/373 (40%), Gaps = 57/373 (15%)
Query: 11 FNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGN 70
+ HQ+ +L +E+ +++DVNV P K +I +++ + V+ H F
Sbjct: 288 LHGHQHSSYLLFLEVDPENIDVNVHPTKHEIRFLNQREVHEFVR-HYAKEILSQFQTASA 346
Query: 71 NMNQSMEQDPSSDVDME---KIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEP 127
++ Q+M+ D SD ++ K Q S +ET+ N E QQ+P +
Sbjct: 347 DLAQAMKVDEQSDYSVQPQPKYQEQFSLHRANETL--------NADSEPQPQQAPTELLT 398
Query: 128 D---TPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRF 184
D + + I D P+ GS + + + L ++DQ
Sbjct: 399 DFNASRPQAIHYADQTPKYNGSPQLNNALKTYLAPLRDQ---------------STNFSV 443
Query: 185 HANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYN 244
+ NI+P V K F + Q + +I+ + L I+D HA E+
Sbjct: 444 NENIEP------------VTKVDEFPLGIAIAQLHGIYILAQNTEGLIIVDMHAAHERIL 491
Query: 245 FETLQ----KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVL 300
+ ++ K SQ+L++P+ + ++++ +++ P + G E D D V+
Sbjct: 492 LQQMKNAWDKPEFWTSQQLLIPKVISISRMQAVRVEELKPQLERLGLE--IDLYGDEQVI 549
Query: 301 LTSLPMSKNTTLGREDIE----ELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRA 356
+ +P L + D E ELL L + + R + A AC +V R
Sbjct: 550 VRGVP----AILQKADFENLIPELLNDLDPNDEAQGLLQKR-DELLAGMACHGAVRAHRQ 604
Query: 357 LSVGEMTGLVRNM 369
LS+ EM L+R M
Sbjct: 605 LSLSEMNALLRQM 617
>gi|325289885|ref|YP_004266066.1| DNA mismatch repair protein mutL [Syntrophobotulus glycolicus DSM
8271]
gi|324965286|gb|ADY56065.1| DNA mismatch repair protein mutL [Syntrophobotulus glycolicus DSM
8271]
Length = 663
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 165/384 (42%), Gaps = 26/384 (6%)
Query: 4 VNEVYHQFNNHQ-YPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYA 62
V +H H YP ++LNIE+S DVNV P K +I E L+ + + +
Sbjct: 269 VKNSFHTLIPHNTYPIVVLNIELSPSLYDVNVHPSKMEIKFKQENELMTFLTAQLNKAVL 328
Query: 63 IGFTVDGNNMN-QSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQS 121
G ++ +++ + Q + + + +I S E +T+ ++D +F ++N
Sbjct: 329 DGRKIERIDLHPPAFGQAKETSLFLNEISDSLKES---QTVYARNKD-FDFRSKSNTSSR 384
Query: 122 PETVEPDTPDETIEVIDDMPRLQGSYR-QSTPVTLSLDIIQDQLKARYARRTVQAQDRCV 180
+ P ET+E + D+ R +S P ++ Q+ + + + +
Sbjct: 385 ----HTEQPMETVETLSDLFRQSKQNEIESNPRGINH---QEAITGKNINDLTEINTNAI 437
Query: 181 E-NRFHANIDPSKNKEA---ESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQ 236
+ N H DPS K+ N + + ++ +GQ +I+ D L+IIDQ
Sbjct: 438 DTNINHIANDPSDIKDKINHTDHFNDLNSVNPLGNLRALGQIMGTYILATDDQSLYIIDQ 497
Query: 237 HATDEKYNFETL----QKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFD 292
HA E+ E L QK T SQ L++P L L+ + I+ N +F K+G F +
Sbjct: 498 HAAHERITVEKLYRSFQKDT-PDSQLLLLPITLTLSVHEEQIVLSNFELFRKSG--FILE 554
Query: 293 SSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVM 352
D LL +P+ KN E + L +T + +F + ACR S+
Sbjct: 555 QFGDRTYLLRGVPLIKNLDKPEEIFLSFIDELMKDRTTVSLENIIEKWIFTA-ACRNSIK 613
Query: 353 IGRALSVGEMTGLVRNMGRIDQPW 376
LS+ +M L+ N+ R + P+
Sbjct: 614 GNDYLSIPDMQALLFNLSRAENPY 637
>gi|262038761|ref|ZP_06012118.1| DNA mismatch repair protein MutL [Leptotrichia goodfellowii F0264]
gi|261747219|gb|EEY34701.1| DNA mismatch repair protein MutL [Leptotrichia goodfellowii F0264]
Length = 648
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 170/386 (44%), Gaps = 45/386 (11%)
Query: 3 LVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYA 62
+++ Y + +YPF+I+ ++ +DVNV P K+ + ++K++ +K I D Y
Sbjct: 258 VIDGYYTKLMKGKYPFVIIFFDIDPKEIDVNVHPSKKIVKFSNDKIVYKQIKDAI-DEYF 316
Query: 63 IGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEE-----VEHETIPVPSEDNSNF-SHEA 116
+G P+ D+ + I N EE E I S+ +F +H+
Sbjct: 317 YQSDREG--------WQPNIDLLKKSINVENKEEKIKDLFSDEVIKGESQKFFSFETHDG 368
Query: 117 NLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQL---KARYARRTV 173
+ + ++ T +E I GS ++ + + +I +L Y +
Sbjct: 369 DF-SAGNKIQERTLEEII----------GSNAENNEIKENKEIESSRLLHDTDDYIIEEM 417
Query: 174 QAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEK-------MKIVGQFNLGFIIVK 226
++ E + +E+ E K FEK ++GQ +I+V+
Sbjct: 418 NKNEKVFEKSDKIKEELEIKEESIRETGNDYKVGTFEKHTGEQFTYDVLGQIFDTYILVR 477
Query: 227 YDSDLFIIDQHATDEKYNFETLQKT---TLIKSQKLVVPQNLHLTKINQCILKDNLPVFY 283
+++L I DQH E+ +E L++ KSQ L++PQ + ++++ + I+ DN+ VF
Sbjct: 478 KNNELEIYDQHIIHERILYEELKEKFSGKEHKSQHLLLPQKMEVSEVEKSIIFDNIEVF- 536
Query: 284 KNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFA 343
N F F D + ++ ++P + +LL L++ + + R + I +M
Sbjct: 537 -NEFGFDIDEFSNNEIVFRAVPAFDFRDSIQNVFLKLLSDLKNESEIKDLRENIIISM-- 593
Query: 344 SRACRKSVMIGRALSVGEMTGLVRNM 369
+C+ +V G+ L++ EM +VR +
Sbjct: 594 --SCKGAVKAGQKLNMNEMQNMVRRL 617
>gi|195583626|ref|XP_002081618.1| GD25619 [Drosophila simulans]
gi|194193627|gb|EDX07203.1| GD25619 [Drosophila simulans]
Length = 713
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 46/61 (75%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K++NE+YH++N Q PFI LNI +R VDVN+TPDKRQ+ +++E++LL +K + D++
Sbjct: 336 KVMNEIYHRYNVQQQPFIYLNIITARSDVDVNLTPDKRQLLINNERILLLALKKSLLDTF 395
Query: 62 A 62
Sbjct: 396 G 396
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 134 IEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKA-RYARRTVQAQDRCVENRFHANIDPSK 192
IE ++M S S +T SL+ I LKA +R + + + RF I+P++
Sbjct: 622 IEFDEEMEEGLPSNFSSGGLTTSLEEIASSLKAHEQQQRDRRTRTKLQRLRFKTEINPNQ 681
Query: 193 NKEAESELNRVIKKSMFEKMKIVGQFNLGFI 223
N AE+EL R I K F +M+I+GQF G +
Sbjct: 682 NNSAEAELQREIDKEDFARMEIIGQFKSGLV 712
>gi|253701877|ref|YP_003023066.1| DNA mismatch repair protein [Geobacter sp. M21]
gi|259509935|sp|C6E4L2.1|MUTL_GEOSM RecName: Full=DNA mismatch repair protein MutL
gi|251776727|gb|ACT19308.1| DNA mismatch repair protein MutL [Geobacter sp. M21]
Length = 650
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 78/180 (43%), Gaps = 20/180 (11%)
Query: 204 IKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL---IKSQKLV 260
+ F + ++GQFN +I+ + +DL +IDQHA E+ FE L+ + SQ L+
Sbjct: 454 VAAGYFSSLGVIGQFNASYILCQRGTDLILIDQHAAHERVAFEKLKGQFAGREVDSQGLL 513
Query: 261 VPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEEL 320
P+ + + +L+++ + GFE F+ LL +P + T + I ++
Sbjct: 514 FPETMEFSFRESAVLREHQAELARLGFE--FEEFGGNTWLLKGVPQVLSATRYVDTIRDI 571
Query: 321 LFMLQHTNSTEHCRPSRIRA-------MFASRACRKSVMIGRALSVGEMTGLVRNMGRID 373
L L SR RA + A AC V R LS E+ L + M D
Sbjct: 572 LEELGSL--------SRSRAFSDIQEDLLARIACHSVVRGKRTLSPVEIAALFKQMDETD 623
>gi|253747389|gb|EET02113.1| Pms1-like protein [Giardia intestinalis ATCC 50581]
Length = 731
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 84/202 (41%), Gaps = 32/202 (15%)
Query: 204 IKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKT--TLIKSQKLVV 261
++S F +K + Q+N F++ + D F+IDQHA E F + QK +
Sbjct: 492 FRQSNFANLKYICQYNQSFLLAQLDDTFFLIDQHAAHEAKYFSDYWHNPQCYLSKQKTIA 551
Query: 262 PQNLHLTKINQCILKDNLP--VFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEE 319
P L L + L++ L +F GFE LL++ P TL +D E
Sbjct: 552 PLKLELRPDEKLCLEEFLSSTLFDIIGFELRISGE---YALLSAFPSLFGQTLTEDDFRE 608
Query: 320 -LLFMLQHTN-----------STEHCR-------------PSRIRAMFASRACRKSVMIG 354
LL + HT + E R P RIR +FAS++C+ SV +G
Sbjct: 609 YLLLLYGHTREYIESILRISEAEEKSREKMLVRILHNNIAPPRIRKIFASKSCKASVRLG 668
Query: 355 RALSVGEMTGLVRNMGRIDQPW 376
L ++ ++ ++P+
Sbjct: 669 DPLLDSTAKRIIADLAYCEKPF 690
>gi|334141919|ref|YP_004535126.1| DNA mismatch repair protein MutL [Novosphingobium sp. PP1Y]
gi|333939950|emb|CCA93308.1| DNA mismatch repair protein MutL [Novosphingobium sp. PP1Y]
Length = 607
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 78/163 (47%), Gaps = 13/163 (7%)
Query: 216 GQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKT----TLIKSQKLVVPQNLHLTKIN 271
GQ +I+ + L I+DQHA E+ E L+ +++SQ L++P+ + L ++
Sbjct: 422 GQVAGTYIVAEAQDGLVIVDQHAAHERLVLERLKAAGAEDAMVRSQALLLPEVVELEEVA 481
Query: 272 QCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQ---HTN 328
L+D + + F + +L+ ++P + LG+ D++ LL L N
Sbjct: 482 CDALEDRIDDMAR--FGLVLERFGPAAMLVRAVP----SVLGKTDVQGLLRDLADDLAKN 535
Query: 329 STEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGR 371
++ + A+ AC SV GR+L+V EM L+R M R
Sbjct: 536 GDALLLGEKLDLVLATMACHGSVRAGRSLTVAEMNALLREMER 578
>gi|219848834|ref|YP_002463267.1| DNA mismatch repair protein MutL [Chloroflexus aggregans DSM 9485]
gi|219543093|gb|ACL24831.1| DNA mismatch repair protein MutL [Chloroflexus aggregans DSM 9485]
Length = 612
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 81/174 (46%), Gaps = 12/174 (6%)
Query: 207 SMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQ---KTTLIKSQKLVVPQ 263
S +++VGQ L +I+ + +++IDQHA E+ +E L ++SQ+L++PQ
Sbjct: 420 SALPPLRVVGQVGLTYIVAEAPEGMYLIDQHAAHERITYEKLMNQYAQRAVESQQLLIPQ 479
Query: 264 NLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLF- 322
+ L+ +L N + GF + VL+ ++P TL +++ + L
Sbjct: 480 AVELSPEASTLLVGNAEKLAEWGFALEPWGT---GVLVRAIP----ATLPPDELTQALHE 532
Query: 323 MLQHTNSTEHCRPSRIR-AMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQP 375
+ + P R AM + AC SV G+ LS EM L+R + + P
Sbjct: 533 VAERLAGRGGSSPLEWREAMLITLACHTSVRAGQPLSHDEMRHLLRQLEQCVSP 586
>gi|308806882|ref|XP_003080752.1| suppressor of forked protein family protein / SUF family protein
(ISS) [Ostreococcus tauri]
gi|116059213|emb|CAL54920.1| suppressor of forked protein family protein / SUF family protein
(ISS) [Ostreococcus tauri]
Length = 1661
Score = 63.5 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 49/185 (26%), Positives = 90/185 (48%), Gaps = 13/185 (7%)
Query: 204 IKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL-----IKSQK 258
++++ EK +++ Q FII D + DQHA DE+ E L T L + +Q+
Sbjct: 441 LERAALEKARVIDQVGKKFIISTVDDCIVAFDQHACDERIGLEELWATILNPNKHVPTQE 500
Query: 259 LVVPQNLHLT--KINQC-ILKDNLPVFYKNGFEFSFDSSDDGN----VLLTSLPMSKNTT 311
P L T +N+ L++N + G+++ D +G + LT +P + TT
Sbjct: 501 TKSPA-LWATPMSVNEFDALENNAHNVRRWGWDWKTDDGGNGKQETMIYLTRVPTIRGTT 559
Query: 312 LGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGR 371
LG + + + L+ L T+S+ P + + AS+ACR ++M G L+ E +++ +
Sbjct: 560 LGGDALRQYLYELTSTSSSSTHAPRPLHRLLASKACRGAIMFGDTLNPHECECIIKALRL 619
Query: 372 IDQPW 376
P+
Sbjct: 620 TQMPF 624
>gi|33667830|gb|AAQ24515.1| Pms1 [Giardia intestinalis]
Length = 727
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 84/198 (42%), Gaps = 34/198 (17%)
Query: 209 FEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKT--TLIKSQKLVVPQNLH 266
F +K + Q+N F+I + ++ ++IDQHA E +F + QK + P L
Sbjct: 494 FNNLKYICQYNQSFLITQLNNTFYLIDQHAAHEAKHFSDYWHNPHCYLSRQKTITPLKLR 553
Query: 267 LTKINQCILKDNL--PVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFML 324
L + L++ L +F GFE + VL+ S P TL ED E L L
Sbjct: 554 LRPDEKLCLEEFLSSAIFDIIGFELCL---SENYVLIFSFPSLFGQTLTEEDFREYLLSL 610
Query: 325 QHTNSTEH-----C---------------------RPSRIRAMFASRACRKSVMIGRALS 358
+ ++ EH C P RIR +FAS++C+ SV +G
Sbjct: 611 -YGHTREHVESIICAKSTGSKPREKSLLCLLHNNIAPPRIRKIFASKSCKASVRLGDPRL 669
Query: 359 VGEMTGLVRNMGRIDQPW 376
++ ++ R ++P+
Sbjct: 670 DSTAKRIIADLARCEKPF 687
>gi|73662773|ref|YP_301554.1| DNA mismatch repair protein [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|123761519|sp|Q49X89.1|MUTL_STAS1 RecName: Full=DNA mismatch repair protein MutL
gi|72495288|dbj|BAE18609.1| DNA mismatch repair protein [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 655
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 82/374 (21%), Positives = 157/374 (41%), Gaps = 34/374 (9%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNM-- 72
+YP +NIEM VDVNV P K ++ + E L + I +++ + N+M
Sbjct: 279 RYPICYINIEMDPILVDVNVHPTKLEVRLSKEDQLFNLIVEKIREAFKDRILIPQNDMDK 338
Query: 73 ----NQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPD 128
N+ ++Q +D EK Q+ E+ + PV S + + + S EP
Sbjct: 339 ITKKNKVLDQFEQQKLDFEKKQQQ-----ENHSQPVNSHEEDEKNDDKAYHSSQTHYEP- 392
Query: 129 TPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANI 188
D + + + + ST D Q Q Y + E F ++I
Sbjct: 393 --------TDYILKEENNTSVSTSPNSDDDYTQTQKSVLYDLENENQSEFINEADFDSDI 444
Query: 189 DPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETL 248
+ + + +++ + + M++VGQ + +II + ++ +++IDQHA E+ +E
Sbjct: 445 SNHSDSDIKGSVSKDPSRRV-PYMEVVGQVHGTYIIAQNENGMYMIDQHAAQERIKYEYF 503
Query: 249 QKT---TLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFS-FDSSDDGNVLLTSL 304
++ + Q L++P H + I+ + K G F +D ++ S
Sbjct: 504 REKIGEVTNEIQNLLIPLTFHFSTDELMIINQHKEELDKVGVHLEPFGGND---YIVDSY 560
Query: 305 PMSKNTTLGREDIEELL-FMLQHTNSTEHCRPSRIRAMFA-SRACRKSVMIGRALSVGEM 362
P+ T E I++++ ++L+H + +IR A +C+KS+ L EM
Sbjct: 561 PVWFPTAEAEEIIKDMIEYVLEH----KKVNVKKIREDAAIMMSCKKSIKANHYLKNNEM 616
Query: 363 TGLVRNMGRIDQPW 376
LV + + P+
Sbjct: 617 ADLVNQLRETEDPF 630
>gi|375084994|ref|ZP_09731787.1| DNA mismatch repair protein MutL [Megamonas funiformis YIT 11815]
gi|374567643|gb|EHR38852.1| DNA mismatch repair protein MutL [Megamonas funiformis YIT 11815]
Length = 647
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 84/389 (21%), Positives = 171/389 (43%), Gaps = 46/389 (11%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K ++ YH YPF+ILNIE+++ ++D+NV P K +I + E LL T+
Sbjct: 266 KAIDNAYHSLLPKSGYPFVILNIEINKRTIDINVHPQKAEIKFEDESLLFKTI------Y 319
Query: 61 YAIGFTVDGNNMNQSME--QDPSSDVDMEKIQRSNSEEVE---HETIPVPSEDN---SNF 112
+A+ V N+ NQ++ P +D + I+++ E++ E +P S ++ ++
Sbjct: 320 HAVLEAVKPND-NQALSDFAIPVTDKALH-IEKTVPEQINMDLSENMPSTSANSFKQNSI 377
Query: 113 SHEANLQQ--SPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYAR 170
+H ++L+ +P T + + + E + P L + + IQ+ Y
Sbjct: 378 NHISSLKNNTTPSTTDLNKFRQARETLH--PNLSNHHSNT---------IQETAIQDYQT 426
Query: 171 RTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKY-DS 229
T + NI +N +++K+++ + +GQ + FI+ + +
Sbjct: 427 NTTTKPQTDI------NISSKENLTNCQNSTQLLKEAV--NLTPIGQIDDCFIVAQGPNG 478
Query: 230 DLFIIDQHATDEKYNFETLQKTT-LIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFE 288
++IIDQHA E+ ++ K T I Q L++ L + ++++N + Y GF
Sbjct: 479 GMYIIDQHAAHERILYDKFAKQTERIPVQPLLMHLFLDVNNSELTLIEENQQILYDLGFN 538
Query: 289 FSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIR-AMFASRAC 347
+ + L +P + E+L L ++ P IR + A AC
Sbjct: 539 VEL--AGQNQIRLKEVPADIKPQESEDIFREILISLSQLHTP---TPQEIRHSCLAMTAC 593
Query: 348 RKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+ ++ G L++ +M ++ + + P+
Sbjct: 594 KAAIKAGDVLNITQMKIILNELAQTTLPY 622
>gi|262279503|ref|ZP_06057288.1| DNA mismatch repair ATPase [Acinetobacter calcoaceticus RUH2202]
gi|262259854|gb|EEY78587.1| DNA mismatch repair ATPase [Acinetobacter calcoaceticus RUH2202]
Length = 649
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/370 (20%), Positives = 148/370 (40%), Gaps = 51/370 (13%)
Query: 11 FNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGN 70
+ HQ+ +L +E+ +++DVNV P K +I +++ + V+ H F
Sbjct: 288 LHGHQHSSYLLFLEVDPENIDVNVHPTKHEIRFLNQREVHEFVR-HYAKETLSQFQTASA 346
Query: 71 NMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPD-- 128
++ Q+M+ D +SD ++ + + H + DN EA Q +P + D
Sbjct: 347 DLAQAMKVDETSDYSVQPQPKYQEQFALHRANEALNPDN-----EARAQNAPTELLTDFN 401
Query: 129 -TPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHAN 187
+ + + D PR GS + + + L ++DQ
Sbjct: 402 ASRPQAVHYADQTPRYNGSPQLNNALKTYLAPLRDQ------------------------ 437
Query: 188 IDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFET 247
N ++ V K F + Q + +++ + L I+D HA E+ +
Sbjct: 438 ---PANFSVNEDIEPVTKVDEFPLGIAIAQLHGIYVLAQNTEGLIIVDMHAAHERILLQQ 494
Query: 248 LQ----KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTS 303
++ K SQ+L++P+ + ++++ +++ P + G E D D +++
Sbjct: 495 MKNAWDKPEFWTSQQLLIPKVISISRMQAMRVEELKPQLERLGLE--IDLYGDEQIIVRG 552
Query: 304 LPMSKNTTLGREDIE----ELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSV 359
+P L + D E ELL L + + R + A AC +V R LS+
Sbjct: 553 VP----AILQKADFENLIPELLNDLDPNDEAQGLLQKR-DELLAGMACHGAVRAHRQLSL 607
Query: 360 GEMTGLVRNM 369
EM L+R M
Sbjct: 608 SEMNALLRQM 617
>gi|404418528|ref|ZP_11000295.1| DNA mismatch repair protein [Staphylococcus arlettae CVD059]
gi|403489121|gb|EJY94699.1| DNA mismatch repair protein [Staphylococcus arlettae CVD059]
Length = 649
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 91/394 (23%), Positives = 158/394 (40%), Gaps = 53/394 (13%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K + E YH +YP LNIEM VDVNV P K ++ + E+ L + I ++
Sbjct: 265 KAILEGYHTLLTIGRYPICYLNIEMDPILVDVNVHPTKLEVRLSKEEQLYKLIVEKIREA 324
Query: 61 YAIGFTVDGNNM------NQSMEQDPSSDVDMEKIQRSNSEEVEHETIP------VPSED 108
+ + N++ N+ ++Q +D E+ Q+ N + E PS
Sbjct: 325 FHDKILIPHNDLDKVNKKNKVLDQFEQQKIDFEQRQQYNDHQASTEATSNYPSSNEPSSQ 384
Query: 109 NSNFSHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARY 168
+ S QS T PDT + Y+ LS +D +
Sbjct: 385 VKDQSESGYTNQSSSTSIPDTAQQE--------ETDADYKAKQREVLSNLTDEDDVPIVN 436
Query: 169 ARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYD 228
V A D K++ +++ RV M+IVGQ + +II + +
Sbjct: 437 VDNEVTASD-------------IKDQRSQTPSRRV------PYMEIVGQVHGTYIIAQNE 477
Query: 229 SDLFIIDQHATDEKYNFETLQKTTLIKS---QKLVVPQNLHLTKINQCILKDNLPVFYKN 285
+++IDQHA E+ +E ++ S Q L++P H +K I++ K
Sbjct: 478 DGMYMIDQHAAQERIKYEYFREKIGHVSNEVQNLLIPLTFHFSKDELMIIEQYKEELAKV 537
Query: 286 GFEFS-FDSSDDGNVLLTSLPMSKNTTLGREDIEELL-FMLQHTNSTEHCRPSRIRAMFA 343
G + F D ++ S P+ E I++++ ++L+H + ++IR A
Sbjct: 538 GVQLEPFGGHD---YIVDSYPVWFPKLEAEEIIKDMIEYVLEH----KKVNINKIREEAA 590
Query: 344 -SRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+C+KS+ L EM LV + + P+
Sbjct: 591 IMMSCKKSIKANHFLKHNEMADLVDQLRDAEDPF 624
>gi|195172652|ref|XP_002027110.1| GL20044 [Drosophila persimilis]
gi|194112923|gb|EDW34966.1| GL20044 [Drosophila persimilis]
Length = 645
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 37/47 (78%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKL 48
K++NE YH++N Q PFI LNI +R VDVN+TPDKRQ+ +++E++
Sbjct: 330 KVINETYHRYNVQQQPFIYLNIITARSDVDVNLTPDKRQLLLNNERI 376
>gi|389847473|ref|YP_006349712.1| DNA mismatch repair protein MutL [Haloferax mediterranei ATCC
33500]
gi|448617251|ref|ZP_21665906.1| DNA mismatch repair protein MutL [Haloferax mediterranei ATCC
33500]
gi|388244779|gb|AFK19725.1| DNA mismatch repair protein MutL [Haloferax mediterranei ATCC
33500]
gi|445748600|gb|EMA00047.1| DNA mismatch repair protein MutL [Haloferax mediterranei ATCC
33500]
Length = 550
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 88/185 (47%), Gaps = 12/185 (6%)
Query: 197 ESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQ---KTTL 253
+S L V +S+F++++++G+F +++ + D DL ++DQHA E+ N+E L+ +T
Sbjct: 346 DSSLEPVSAESVFDEIRVIGRFRELYLLCEADDDLLVVDQHAAHERINYERLREAVETAG 405
Query: 254 IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLG 313
I S + P + L+ + +L+ N V GF + DG + ++P LG
Sbjct: 406 IDSVAVDPPATVSLSSTDVALLEANRGVVEALGFRIA--EFGDGTYRVGAVPAP----LG 459
Query: 314 RE-DIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRI 372
R + L ++ + + P + AC S+ G L+ + T LV +G
Sbjct: 460 RPFSPDALTDVVADVAAGDVSDPR--DELLKDLACHPSIKAGDDLTDEDATRLVERLGSC 517
Query: 373 DQPWV 377
+ P+
Sbjct: 518 ETPYA 522
>gi|332799275|ref|YP_004460774.1| DNA mismatch repair protein mutL [Tepidanaerobacter acetatoxydans
Re1]
gi|438002406|ref|YP_007272149.1| DNA mismatch repair protein MutL [Tepidanaerobacter acetatoxydans
Re1]
gi|332697010|gb|AEE91467.1| DNA mismatch repair protein mutL [Tepidanaerobacter acetatoxydans
Re1]
gi|432179200|emb|CCP26173.1| DNA mismatch repair protein MutL [Tepidanaerobacter acetatoxydans
Re1]
Length = 613
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 97/204 (47%), Gaps = 22/204 (10%)
Query: 187 NIDPSKNKE----------AESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQ 236
++D KNKE E ++IKK +E KI+GQ +I+V+ + ++IDQ
Sbjct: 394 DVDAIKNKEHLQNDSYIPIESDETMQIIKK--YEFQKILGQLFNTYIVVESKNRFYLIDQ 451
Query: 237 HATDEKYNFETLQK---TTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDS 293
HA E+ +E K L SQ L P L+L+ +L + K GF+FS
Sbjct: 452 HAAHERILYEYYSKKYAKQLSNSQTLAAPYVLYLSAQEMMLLDNYKEDILKIGFDFSIFG 511
Query: 294 SDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCR-PSRIRAMFASRACRKSVM 352
SD ++L+ S+P N + D L L +S E+ R PS+ R + S +C ++
Sbjct: 512 SD--SILIRSVPYIFNKPV---DPITLRDALDQLSSNEYARYPSKER-LIISMSCHAAIK 565
Query: 353 IGRALSVGEMTGLVRNMGRIDQPW 376
G LS E+ L+ + + + P+
Sbjct: 566 AGDVLSPIEIQELLDQLKKTEVPY 589
>gi|402579067|gb|EJW73020.1| hypothetical protein WUBG_16077 [Wuchereria bancrofti]
Length = 77
Score = 63.5 bits (153), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/43 (55%), Positives = 36/43 (83%)
Query: 334 RPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
RP+++R +FASRACRKSVMIG +L++ +M +VR++G +D PW
Sbjct: 14 RPAKLRKLFASRACRKSVMIGSSLTMLQMQKIVRHLGTLDHPW 56
>gi|163846708|ref|YP_001634752.1| DNA mismatch repair protein MutL [Chloroflexus aurantiacus J-10-fl]
gi|222524517|ref|YP_002568988.1| DNA mismatch repair protein MutL [Chloroflexus sp. Y-400-fl]
gi|163667997|gb|ABY34363.1| DNA mismatch repair protein MutL [Chloroflexus aurantiacus J-10-fl]
gi|222448396|gb|ACM52662.1| DNA mismatch repair protein MutL [Chloroflexus sp. Y-400-fl]
Length = 624
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 78/162 (48%), Gaps = 10/162 (6%)
Query: 212 MKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQ---KTTLIKSQKLVVPQNLHLT 268
+++VGQ L +I+ + +++IDQHA E+ +E L ++SQ+L++PQ + ++
Sbjct: 437 LRVVGQVGLTYIVAEAPEGMYLIDQHAAHERITYEKLMNQYAQHAVESQQLLIPQAVEVS 496
Query: 269 KINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTN 328
+L N + GF + VL+ ++P + T + I E+ L
Sbjct: 497 PEASALLLGNAERLAEWGFVLEPWGT---GVLVRAIPATLPTDELTQAIHEIAEKLAGRG 553
Query: 329 STEHCRPSRIR-AMFASRACRKSVMIGRALSVGEMTGLVRNM 369
++ P R AM + AC SV G+ LS EM L+R +
Sbjct: 554 GSD---PLEWREAMLITLACHTSVRAGQPLSHEEMRQLLRQL 592
>gi|422343284|ref|ZP_16424212.1| hypothetical protein HMPREF9432_00272 [Selenomonas noxia F0398]
gi|355378591|gb|EHG25771.1| hypothetical protein HMPREF9432_00272 [Selenomonas noxia F0398]
Length = 621
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/379 (21%), Positives = 155/379 (40%), Gaps = 57/379 (15%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K ++ VY +P +L IE+ + ++DVNV P K ++ + E + V + D+
Sbjct: 268 KAIDNVYRALVPKMGFPLAVLCIEVPQRTIDVNVHPQKTELKFEDEGRIFKAVYKSVLDA 327
Query: 61 YAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQ 120
+ + + + +EK + +E++P+ + ++ + ++
Sbjct: 328 -----------IRGAAGETAAIAAAVEK------PKFHYESLPL--HVAAPPTNPSPVRA 368
Query: 121 SPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCV 180
+ V P P E + Q + L QD + T +A++R
Sbjct: 369 ASYAVPPMRPQTVHEAV-----------QWAGQRVDLRTAQDAVG------TERAEERSA 411
Query: 181 ENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATD 240
F A + PS ++A +R I+ S+ +GQ +L +II + L+IIDQHA
Sbjct: 412 ---FVAALSPSVGQDA----DRTIEGSLLP----IGQVDLTYIIAQSAQTLYIIDQHAAH 460
Query: 241 EKYNFETLQK-TTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNV 299
E+ F+ I SQ+++V L +++N +F + GF + + +
Sbjct: 461 ERILFDRFSAHADGIPSQQMLVHAILSFDAHEAQYIEENAELFDRLGFH--LEPAGEREY 518
Query: 300 LLTSLPMSKNTTLGREDIEELLFMLQ--HTNSTEHCRPSRIRAMFASRACRKSVMIGRAL 357
LT P I E+L L H + H R +A A+ ACR ++ G L
Sbjct: 519 RLTEAPADIPLDEAEATIREILISLGDLHAATPAHLR----QAGIATMACRAAIKAGEEL 574
Query: 358 SVGEMTGLVRNMGRIDQPW 376
S+ +M L+ + P+
Sbjct: 575 SIRQMEILLAELCATPFPF 593
>gi|242065624|ref|XP_002454101.1| hypothetical protein SORBIDRAFT_04g024565 [Sorghum bicolor]
gi|241933932|gb|EES07077.1| hypothetical protein SORBIDRAFT_04g024565 [Sorghum bicolor]
Length = 102
Score = 63.2 bits (152), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 12/81 (14%)
Query: 308 KNTTLGREDIEELLFMLQHT------------NSTEHCRPSRIRAMFASRACRKSVMIGR 355
KN T G +D++EL+ ML + ++T+ PSR+RAM ASRACR S MIG
Sbjct: 1 KNITFGVQDVKELISMLADSQGDCSIISSYKLDTTDSVCPSRVRAMLASRACRMSTMIGD 60
Query: 356 ALSVGEMTGLVRNMGRIDQPW 376
L+ EM +++N+ + PW
Sbjct: 61 PLTKAEMKKILKNLTGLRSPW 81
>gi|299769558|ref|YP_003731584.1| DNA mismatch repair ATPase [Acinetobacter oleivorans DR1]
gi|298699646|gb|ADI90211.1| DNA mismatch repair ATPase [Acinetobacter oleivorans DR1]
Length = 649
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/373 (22%), Positives = 154/373 (41%), Gaps = 57/373 (15%)
Query: 11 FNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGN 70
+ HQ+ +L +E+ +++DVNV P K +I +++ + V+ H F
Sbjct: 288 LHGHQHSSYLLFLEVDPENIDVNVHPTKHEIRFLNQREVHEFVR-HYAKETLSQFQTASA 346
Query: 71 NMNQSMEQDPSSDVDME---KIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEP 127
++ Q+M+ D SD ++ K Q S +ET+ SE + Q +P +
Sbjct: 347 DLAQAMKVDEQSDYSVQPQPKYQEQFSLHRANETLNADSEPQT--------QHAPTELLT 398
Query: 128 D---TPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRF 184
D + + + D P+ GS + + + L ++DQ A ++
Sbjct: 399 DFNASRPQAVHYADQTPKYNGSAQLNNALKTYLAPLRDQ-PATFS--------------L 443
Query: 185 HANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYN 244
+ NI+P V K F + Q + +I+ + L I+D HA E+
Sbjct: 444 NENIEP------------VTKFDEFPLGIAIAQLHGIYILAQNTEGLIIVDMHAAHERIL 491
Query: 245 FETLQ----KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVL 300
+ ++ K SQ+L++P+ + ++++ +++ P + G E D D V+
Sbjct: 492 LQQMKNAWDKPEFWTSQQLLIPKVISISRMQAVRVEELKPQLERLGLE--IDLYGDEQVI 549
Query: 301 LTSLPMSKNTTLGREDIE----ELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRA 356
+ +P L + D E ELL L + + R + A AC +V R
Sbjct: 550 VRGVP----AILQKADFENLIPELLNDLDPNDEAQGLLQKR-DELLAGMACHGAVRAHRQ 604
Query: 357 LSVGEMTGLVRNM 369
LS+ EM L+R M
Sbjct: 605 LSLSEMNALLRQM 617
>gi|239617975|ref|YP_002941297.1| DNA mismatch repair protein MutL [Kosmotoga olearia TBF 19.5.1]
gi|259510021|sp|C5CF28.1|MUTL_KOSOT RecName: Full=DNA mismatch repair protein MutL
gi|239506806|gb|ACR80293.1| DNA mismatch repair protein MutL [Kosmotoga olearia TBF 19.5.1]
Length = 602
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/349 (21%), Positives = 148/349 (42%), Gaps = 64/349 (18%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMNQ 74
++PF IL I ++ + +DVN+ P K ++ + L+ +K + ++
Sbjct: 279 RFPFAILFISVNPEMIDVNIHPQKLEVRFSNPSLVFDAIKRAVRNT-------------- 324
Query: 75 SMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPDETI 134
++ S + + E P P ++N+S +QQ + E D P++
Sbjct: 325 --------------LRTSGTSILRIEKRPFPG-SSTNYS---GIQQDTKKQESDNPEKA- 365
Query: 135 EVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKNK 194
R G++ + T + + + +R V + +N NI+ + ++
Sbjct: 366 -------RGYGTHLRET---------HWEQRDHFEKRKVPLHYQP-DNELLLNIERTASR 408
Query: 195 EAE-SELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL 253
E +E + +F G F +I+ + L I+DQHA E+ +E L+K
Sbjct: 409 RFEKTEAKETGEPRLF------GVFGERYILAETKDGLLIVDQHAAHERLIYEKLKKAAK 462
Query: 254 IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLG 313
I+SQKL+ P L L + +L++ K GF+ SF+ + LT +P + ++
Sbjct: 463 IQSQKLLSPIRLTLEDSRKSLLREKKNDVEKLGFQISFEGD---RIFLTGIPSILSESVA 519
Query: 314 REDIEELLFMLQHTNSTEHCRPSRI-RAMFASRACRKSVMIGRALSVGE 361
+ E+L L+ E P +I + ++ AC+ ++ G LS E
Sbjct: 520 VNALNEVLDELRLEGLEE---PEKIFDHLLSTLACKSAIKTGDRLSESE 565
>gi|345872820|ref|ZP_08824747.1| DNA mismatch repair protein mutL [Thiorhodococcus drewsii AZ1]
gi|343917891|gb|EGV28667.1| DNA mismatch repair protein mutL [Thiorhodococcus drewsii AZ1]
Length = 638
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 91/189 (48%), Gaps = 14/189 (7%)
Query: 193 NKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQ--- 249
E E E ++SM +GQ N +++ + L ++D HA E+ +E L+
Sbjct: 430 GAEPEPESEAAPRQSMPPLGFALGQLNGVYLLAQAVDGLILVDIHAAHERIGYERLKRAW 489
Query: 250 KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKN 309
KT + Q L+VP ++ + + + + + G D D G++++ +P
Sbjct: 490 KTDDVVRQPLLVPVSVQVAPREAELFEAHAESIARLGL--VVDRIDAGSLVVREVP---- 543
Query: 310 TTLGREDIEELLFMLQHTNSTEHCRPSR----IRAMFASRACRKSVMIGRALSVGEMTGL 365
L + D+E +L L + +EH R +R I A+ A+ AC SV R L++ EM GL
Sbjct: 544 ALLRQADMERMLRDLI-ADLSEHGRSTRLEEAIDAVLATLACHTSVRANRRLTLDEMNGL 602
Query: 366 VRNMGRIDQ 374
+R M R+++
Sbjct: 603 LREMERVER 611
>gi|389575733|ref|ZP_10165761.1| DNA mismatch repair protein MutL [Eubacterium cellulosolvens 6]
gi|389311218|gb|EIM56151.1| DNA mismatch repair protein MutL [Eubacterium cellulosolvens 6]
Length = 772
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 84/183 (45%), Gaps = 12/183 (6%)
Query: 199 ELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKT---TLIK 255
E ++V+ + + +++GQ + +++Y L+IIDQHA EK N+E + K I
Sbjct: 572 EEDKVLSEQARQMFRLIGQVFDTYWMIEYKDSLYIIDQHAAHEKVNYERMMKAYREKTIH 631
Query: 256 SQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGRE 315
SQ L L L++ +L+ NL F GFE +S + + ++P + + E
Sbjct: 632 SQMLYPSIVLDLSRREAQLLESNLKTFEDLGFE--VESFGGNSFKINAVPANLYSVASDE 689
Query: 316 DIEELLFM--LQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRID 373
LFM L S P I AS +C+ +V LSV E L+ + ++
Sbjct: 690 -----LFMQILAELESLGEVSPKLIPEKLASMSCKAAVKGNNRLSVEEANALIDELLTLE 744
Query: 374 QPW 376
P+
Sbjct: 745 NPY 747
Score = 38.1 bits (87), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQI 41
K + + YH F H+YPF +L +++ + VDVNV P K ++
Sbjct: 266 KAIEDAYHGFLMQHKYPFTLLYLDIVSEKVDVNVHPQKLEV 306
>gi|421848489|ref|ZP_16281477.1| DNA mismatch repair protein MutL [Acetobacter pasteurianus NBRC
101655]
gi|371460850|dbj|GAB26680.1| DNA mismatch repair protein MutL [Acetobacter pasteurianus NBRC
101655]
Length = 643
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 75/162 (46%), Gaps = 23/162 (14%)
Query: 222 FIIVKYDSDLFIIDQHATDEKYNFETLQKTTL---IKSQKLVVPQNLHLTKINQCILKDN 278
+ V D L ++DQHA E+ E L+ L +++Q+L+VP + L ++ +L
Sbjct: 460 ILAVAADGSLVLVDQHAAHERLTHERLRAQFLSGHVQAQRLLVPDVVDLPRVQVDLLLAR 519
Query: 279 LPVFYKNGFEFSFDSSDDGNVLLTSLPM----SKNTTLGREDIEELLFMLQHTNSTEHCR 334
P K G E D +VL+ +LP S +L R+ +EL + E+
Sbjct: 520 QPTLEKLGVEIEAFGGD--SVLVRALPAMLRSSDAVSLLRDLADEL-------EADENGA 570
Query: 335 P-------SRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
P R+ A+ A AC S+ GR LSV EM L+R M
Sbjct: 571 PDEMAALDGRLDAVIARMACHGSIRAGRRLSVEEMNALLRQM 612
>gi|258541836|ref|YP_003187269.1| DNA mismatch repair protein MutL [Acetobacter pasteurianus IFO
3283-01]
gi|384041757|ref|YP_005480501.1| DNA mismatch repair protein MutL [Acetobacter pasteurianus IFO
3283-12]
gi|384050272|ref|YP_005477335.1| DNA mismatch repair protein MutL [Acetobacter pasteurianus IFO
3283-03]
gi|384053382|ref|YP_005486476.1| DNA mismatch repair protein MutL [Acetobacter pasteurianus IFO
3283-07]
gi|384056614|ref|YP_005489281.1| DNA mismatch repair protein MutL [Acetobacter pasteurianus IFO
3283-22]
gi|384059255|ref|YP_005498383.1| DNA mismatch repair protein MutL [Acetobacter pasteurianus IFO
3283-26]
gi|384062549|ref|YP_005483191.1| DNA mismatch repair protein MutL [Acetobacter pasteurianus IFO
3283-32]
gi|384118625|ref|YP_005501249.1| DNA mismatch repair protein MutL [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256632914|dbj|BAH98889.1| DNA mismatch repair protein MutL [Acetobacter pasteurianus IFO
3283-01]
gi|256635971|dbj|BAI01940.1| DNA mismatch repair protein MutL [Acetobacter pasteurianus IFO
3283-03]
gi|256639026|dbj|BAI04988.1| DNA mismatch repair protein MutL [Acetobacter pasteurianus IFO
3283-07]
gi|256642080|dbj|BAI08035.1| DNA mismatch repair protein MutL [Acetobacter pasteurianus IFO
3283-22]
gi|256645135|dbj|BAI11083.1| DNA mismatch repair protein MutL [Acetobacter pasteurianus IFO
3283-26]
gi|256648190|dbj|BAI14131.1| DNA mismatch repair protein MutL [Acetobacter pasteurianus IFO
3283-32]
gi|256651243|dbj|BAI17177.1| DNA mismatch repair protein MutL [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256654234|dbj|BAI20161.1| DNA mismatch repair protein MutL [Acetobacter pasteurianus IFO
3283-12]
Length = 643
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 75/162 (46%), Gaps = 23/162 (14%)
Query: 222 FIIVKYDSDLFIIDQHATDEKYNFETLQKTTL---IKSQKLVVPQNLHLTKINQCILKDN 278
+ V D L ++DQHA E+ E L+ L +++Q+L+VP + L ++ +L
Sbjct: 460 ILAVAADGSLVLVDQHAAHERLTHERLRAQFLSGHVQAQRLLVPDVVDLPRVQVDLLLAR 519
Query: 279 LPVFYKNGFEFSFDSSDDGNVLLTSLPM----SKNTTLGREDIEELLFMLQHTNSTEHCR 334
P K G E D +VL+ +LP S +L R+ +EL + E+
Sbjct: 520 QPTLEKLGVEIEAFGGD--SVLVRALPAMLRSSDAVSLLRDLADEL-------EADENGA 570
Query: 335 P-------SRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
P R+ A+ A AC S+ GR LSV EM L+R M
Sbjct: 571 PDEMAALDGRLDAVIARMACHGSIRAGRRLSVEEMNALLRQM 612
>gi|354612227|ref|ZP_09030179.1| DNA mismatch repair protein mutL [Halobacterium sp. DL1]
gi|353191805|gb|EHB57311.1| DNA mismatch repair protein mutL [Halobacterium sp. DL1]
Length = 672
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/380 (21%), Positives = 147/380 (38%), Gaps = 32/380 (8%)
Query: 10 QFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVD- 68
Q N +YPF +L +E+ D VD NV P K ++ + E+ + V+ + D+ V
Sbjct: 279 QLANDRYPFAVLFVEV--DGVDANVHPRKMEVRFEDEEGVKRAVREAVRDALLDSGLVRS 336
Query: 69 ----GNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHET--IPVPSEDNSNFSHEANLQQSP 122
G + E P S VD + + E + PS +NS A + +
Sbjct: 337 QAPRGRSKPGDTEIAPESAVDTNEREEGTGTEAGTGASELGAPSRENSGGDSTARQESTA 396
Query: 123 ETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRT-VQAQDRCVE 181
+ + + P G + D +A +R T A DR +
Sbjct: 397 GSSRQREFGSSSDGTASEPGYSGEREEPASEQTPADG-----QAPTSRETPAGADDRSFD 451
Query: 182 NRFHANIDPSKNKEAESELNRVIKKSM--FEKMKIVGQFNLGFIIVKYDSDLFIIDQHAT 239
P++N ++ + + +M+++GQ +++ + D L ++DQHA
Sbjct: 452 P-------PTENARLATDESDDPDEGFDSLPEMRVLGQLAGTYVVAETDDGLVLVDQHAA 504
Query: 240 DEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNV 299
DE+ ++E L+ SQ LV P L LT + L GFE + +
Sbjct: 505 DERVHYERLRARLDGTSQALVEPVELELTAGEAAVFDAALAALRDLGFEATLEGR---RA 561
Query: 300 LLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRA--MFASRACRKSVMIGRAL 357
+ ++P L E ++L ++ P+ A + A ACR +V +L
Sbjct: 562 RVEAVPAVLADALDPELARDVLAAFVAETGSD---PAGDAADDLLADMACRPAVTGNTSL 618
Query: 358 SVGEMTGLVRNMGRIDQPWV 377
+ G + L+ + + P+
Sbjct: 619 AEGRVVALLDALDDCENPFA 638
>gi|342218671|ref|ZP_08711279.1| DNA mismatch repair protein MutL [Megasphaera sp. UPII 135-E]
gi|341589367|gb|EGS32648.1| DNA mismatch repair protein MutL [Megasphaera sp. UPII 135-E]
Length = 630
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/384 (21%), Positives = 167/384 (43%), Gaps = 49/384 (12%)
Query: 1 MKLVNEVYHQ-FNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITD 59
K V+ YH YPF +++++M ++DVNV P K +I EK + + I
Sbjct: 266 FKAVDNAYHAMLPKVGYPFAMIHLQMDPATIDVNVHPAKTEIKFSDEKAIYHAIYHAIV- 324
Query: 60 SYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQ 119
Q++ + + IQ +NS++++H E ++ ++H +Q
Sbjct: 325 --------------QALVAQEAPEQVARPIQ-ANSQQMQH-----IEEASAQYAH---VQ 361
Query: 120 QSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLS-LDIIQDQLKARYARRTVQAQDR 178
QS E D + QS P+ LS + + + R+ V
Sbjct: 362 QSFFGGE-----------DSLVERSKVESQSQPLILSNMPLEKSAQPIRHTNDYVPLPSS 410
Query: 179 CV---ENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIID 235
+ E F + P + E S + I+ + E++ +G +I+ K +DL+IID
Sbjct: 411 SIPVDERAFSQQLAPKEGVEEVSADS--IRFADTEEIFPLGSVAECYILAKKGNDLYIID 468
Query: 236 QHATDEKYNFETL-QKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSS 294
QHA E+ ++ ++ + SQ+L++P + + IL + VF G+ +S +
Sbjct: 469 QHAAHERVRYDRFCKRVEGLPSQQLLMPLFVEFDTNDMTILLEQEAVFQDLGYTYS--QA 526
Query: 295 DDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIR-AMFASRACRKSVMI 353
+ + +P + ++ +E ++ + LQ +H + IR A +CR ++
Sbjct: 527 GPETIRVEEIPCDLSMSMIQESLQTICHDLQE---NKHLDKATIRHRALAYLSCRGAIKA 583
Query: 354 GRALSVGEMTGLVRNMGRIDQPWV 377
G +++ EM L+ ++ + ++P+V
Sbjct: 584 GDHITMREMKQLLDDLFKTEKPFV 607
>gi|397904384|ref|ZP_10505300.1| DNA mismatch repair protein MutL [Caloramator australicus RC3]
gi|397162604|emb|CCJ32634.1| DNA mismatch repair protein MutL [Caloramator australicus RC3]
Length = 609
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 81/378 (21%), Positives = 163/378 (43%), Gaps = 66/378 (17%)
Query: 4 VNEVYHQFN-NHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYA 62
+ VY ++ + ++PF ++ I M+ +DVNV P K ++ +++ + V + +++A
Sbjct: 268 IENVYRSYSTSDKFPFYVVKIIMNPQLIDVNVHPTKAEVKFQNDQEIYRLVYKALQNAFA 327
Query: 63 IGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSP 122
+V P +D+ I+++ S E++ E I FS +QS
Sbjct: 328 TTASV------------PKVIIDL-NIEKNFSPEIKSEEI--------TFSFNKQDKQSL 366
Query: 123 ETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVEN 182
E + D + SY+ + + K Y + +
Sbjct: 367 EKSDSDVFN--------------SYKPNVK----------EDKQEYINENINKE------ 396
Query: 183 RFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEK 242
+I+ KN E E ++ ++F K+ +GQ +L +II + +++ +IIDQHA E+
Sbjct: 397 ---KSIEEVKNFEDEEIIDNK-TSTLFPKLVPIGQIHLTYIIAEAENEFYIIDQHAAHER 452
Query: 243 YNFETL---QKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNV 299
+E + T I SQ L+ P+ + L ++ L +N+ F K G F + ++
Sbjct: 453 ILYEKYLDEYQRTAIHSQTLLTPKIIDLKTSDKEFLLENIENFAKIG--FVIEDFGGNSI 510
Query: 300 LLTSLPMSKNTTLGRED-IEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALS 358
L S+P+ G + I+ +L + + I + + AC+ ++ G L+
Sbjct: 511 SLRSVPV----IYGNPNYIDVFNEILNEIVQSSGGFLNSINKIIYTMACKGAIKAGDKLT 566
Query: 359 VGEMTGLVRNMGRIDQPW 376
+ EM L+ ++ R P+
Sbjct: 567 LSEMNKLIDDLRRCKNPY 584
>gi|257386447|ref|YP_003176220.1| DNA mismatch repair protein MutL [Halomicrobium mukohataei DSM
12286]
gi|257168754|gb|ACV46513.1| DNA mismatch repair protein MutL [Halomicrobium mukohataei DSM
12286]
Length = 709
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 78/172 (45%), Gaps = 11/172 (6%)
Query: 212 MKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKT--TLIKSQKLVVPQNLHLTK 269
++I+GQ + +++ + D L +IDQHA DE+ N+E L+ +Q L P L LT
Sbjct: 511 LRILGQLHETYVVAEADDGLVVIDQHAADERINYERLKDAFEGETTTQALAEPVELELTA 570
Query: 270 INQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNS 329
+ +D + + GF D + D V + ++P G E ++++L +
Sbjct: 571 GEAAVFEDRVEALARLGFH--ADRTGDRTVEVRTVPGVIADAAGPELVQDVLAAFV---A 625
Query: 330 TEHCRPSRIRA----MFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPWV 377
EH + A + A AC S+ +L+ G + L+ + + P+
Sbjct: 626 GEHEAADTVEAAADELLADLACYPSITGNTSLTEGSIRELLAALDDCENPYA 677
>gi|255657967|ref|ZP_05403376.1| DNA mismatch repair protein MutL [Mitsuokella multacida DSM 20544]
gi|260850168|gb|EEX70175.1| DNA mismatch repair protein MutL [Mitsuokella multacida DSM 20544]
Length = 655
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 82/375 (21%), Positives = 150/375 (40%), Gaps = 41/375 (10%)
Query: 16 YPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMNQS 75
+P +L IE+ + ++DVNV P K ++ + E + V + D AI G +
Sbjct: 280 FPLAVLCIEVPQRTIDVNVHPQKSELKFEDESRIFKAVYKAVLD--AIRPAGRGLGEVAA 337
Query: 76 MEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETV-------EPD 128
+ + P V ME +Q + E E I +P + + Q P+T+ P
Sbjct: 338 VVEKPEQHVTMEPMQFVPATEPLAEPI-IPQWPQAAAASPIAAQSKPKTIYEAVHRTAPS 396
Query: 129 TPDETIEVIDDMPRLQGSYRQSTP---VTLSLDIIQDQLKARYARRTVQAQDR-CVENRF 184
D L+ + P + + +++ + A AQ+ C E
Sbjct: 397 AASSLAGFSDTQESLRREREAAVPLHDIHAAHPVLEGTVAETAAAPLSSAQETPCAEGE- 455
Query: 185 HANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYN 244
K + + E V +GQ +L +II + L+I+DQHA E+
Sbjct: 456 -------KGERLQYEGTVVP----------IGQVDLTYIIAQDAKGLYIVDQHAAHERIL 498
Query: 245 FETLQKTTL-IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVL--L 301
F+ I SQ+L+V Q L + +++ + +F GF + ++
Sbjct: 499 FDKFSAMAGDIPSQQLLVHQILTFDRKESELVEAHQELFASLGFHMEMSGEREFRLIEVP 558
Query: 302 TSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGE 361
+P+S+ + RE + L+ M H + + R +A A+ ACR ++ G LS +
Sbjct: 559 ADVPVSEAEDIIREILTNLMDM--HETTAKEIR----QACLATTACRAAIKAGEELSFRQ 612
Query: 362 MTGLVRNMGRIDQPW 376
M ++ + D P+
Sbjct: 613 MQIILDALAHTDFPY 627
>gi|195120548|ref|XP_002004786.1| GI20104 [Drosophila mojavensis]
gi|193909854|gb|EDW08721.1| GI20104 [Drosophila mojavensis]
Length = 380
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 39/49 (79%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLL 50
K++N++Y ++N Q PFI LNI SR VDVN+TPDKRQ+ +++E++LL
Sbjct: 330 KVMNDMYRRYNVQQQPFIYLNIVTSRAEVDVNLTPDKRQLLLNNERILL 378
>gi|189485479|ref|YP_001956420.1| DNA mismatch repair protein MutL [uncultured Termite group 1
bacterium phylotype Rs-D17]
gi|238058939|sp|B1H0C7.1|MUTL_UNCTG RecName: Full=DNA mismatch repair protein MutL
gi|170287438|dbj|BAG13959.1| DNA mismatch repair protein MutL [uncultured Termite group 1
bacterium phylotype Rs-D17]
Length = 595
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 81/169 (47%), Gaps = 10/169 (5%)
Query: 212 MKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFE---TLQKTTLIKSQKLVVPQNLHLT 268
+K++GQ +II DL+I DQHA E+ +E + K+ IK Q++++P+N L+
Sbjct: 409 IKVIGQVFDTYIIASNKGDLYIFDQHAAAERVRYEFYLSQMKSQTIKIQQMLMPENFDLS 468
Query: 269 KINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELL-FMLQHT 327
+LK N+ +F N S + + +T+ P LG +E+++ ++
Sbjct: 469 PSISELLKANINIF--NELGISIEEFGQNSFRITAYP----ALLGNISMEQIVKTIISDI 522
Query: 328 NSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+H + R ACR S+ G +S E L+ ++ + QP+
Sbjct: 523 EDDKHAEIEQKRDKIIRSACRASIKAGDNVSFIEAKKLINDLFKCKQPF 571
>gi|303233710|ref|ZP_07320364.1| DNA mismatch repair protein, C-terminal domain protein [Finegoldia
magna BVS033A4]
gi|302495144|gb|EFL54896.1| DNA mismatch repair protein, C-terminal domain protein [Finegoldia
magna BVS033A4]
Length = 626
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 157/386 (40%), Gaps = 84/386 (21%)
Query: 13 NHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITD------SYAIGFT 66
N ++P L E++ VDVNV P+K++ VK+ I D + + F
Sbjct: 276 NGRFPLFWLFFEINPKLVDVNVHPNKQK------------VKISILDEILEQLNKKVRFL 323
Query: 67 VDGN----NMNQSMEQDPSSDVDMEKIQR-SNSEEVEHETIPVPS------EDNSNFSHE 115
++ N N++QS+ D D+ + SN +++ + P+ +NS S+
Sbjct: 324 LENNVRITNISQSIPDDKYKDLRRNYFESDSNLTNYKYDKVSEPTYSYNLFNENSKLSNL 383
Query: 116 ANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQA 175
N++ E+ E + P K + + V
Sbjct: 384 RNIRYKDES----------EAFNKKPETN--------------------KYFFKEKDVAK 413
Query: 176 QDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVK--YDSDLFI 233
QD N F I+ K ES L + +EK I+ +I+ K YDS +++
Sbjct: 414 QD----NLFLDEIEQIK---VESYLAK------YEKFDILTVLFKTYILAKDEYDSKIYL 460
Query: 234 IDQHATDEKYNFETLQKTTLIK---SQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFS 290
DQHA E+ N+E L K L K SQ L P N+ LT I +N +F + G+E
Sbjct: 461 FDQHACHERINYEKLTKQMLDKEVVSQNLAFPINISLTDELMEIYTNNKSIFEELGYE-- 518
Query: 291 FDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRP-SRIRAMFASRACRK 349
D D +V++ ++P G + E L + T + P I + R+C+
Sbjct: 519 SDVFSDDSVVVRAVPY----LFGNSNAEFLFTDILDTIAKNSNDPFDVIESKVIKRSCKM 574
Query: 350 SVMIGRALSVGEMTGLVRNMGRIDQP 375
SV G LS E+ L+ ++ + + P
Sbjct: 575 SVKAGDTLSNFEIIKLLEDLFKCEYP 600
>gi|114327127|ref|YP_744284.1| DNA mismatch repair protein mutL [Granulibacter bethesdensis
CGDNIH1]
gi|114315301|gb|ABI61361.1| DNA mismatch repair protein mutL [Granulibacter bethesdensis
CGDNIH1]
Length = 619
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 72/153 (47%), Gaps = 12/153 (7%)
Query: 223 IIVKYDSDLFIIDQHATDEKYNFETLQKTTL---IKSQKLVVPQNLHLTKINQCILKDNL 279
I V D L ++DQHA E+ E L+ L + SQ L++P+ + + L D
Sbjct: 442 IAVAADGALVLVDQHAAHERLTHEALRSALLDGTVNSQALLLPEVVEMPPREATHLLDAA 501
Query: 280 PVFYKNGFEFSFDSSDDGNVLLTSLPM---SKNTTLGREDIEELLFMLQHTNSTEHCRPS 336
K G + ++ G VL+ +LP ++ + DI E L L + + E S
Sbjct: 502 SSLAKLGLDI--EAFGPGAVLVRALPALLKPQSVSALLRDIAEELAELGASIALE----S 555
Query: 337 RIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
R+ A+ A AC S+ GR L+V EM L+R M
Sbjct: 556 RLDAVIARMACHGSIRAGRRLTVPEMNALLRQM 588
>gi|251780192|ref|ZP_04823112.1| DNA mismatch repair protein MutL [Clostridium botulinum E1 str.
'BoNT E Beluga']
gi|243084507|gb|EES50397.1| DNA mismatch repair protein MutL [Clostridium botulinum E1 str.
'BoNT E Beluga']
Length = 676
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 89/393 (22%), Positives = 168/393 (42%), Gaps = 52/393 (13%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATV--KVHITDSYAIGFTVDGNNM 72
++PF IL IE+ + +DVN+ P K ++ + E+ + + VH + + F+
Sbjct: 280 KFPFFILFIEIYPEYIDVNIHPTKSEVKFNDERFIFKKIFGAVHTSLKEEV-FSTFSIPE 338
Query: 73 NQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPDE 132
++ +S++++E+I EE E N+N + N+ + D+
Sbjct: 339 EENEATSKNSNLNIEEITFKIEEEQEKVKF------NTNHLLQKNICST-------LGDK 385
Query: 133 TI--EVIDDMPRLQGSYRQSTP--VTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANI 188
I + D+ ++ + P V L +D+ D ++ + EN
Sbjct: 386 GINKHIYDEKHKIDTDIHNNIPLNVNLPVDLKCDHIRLEEDNNNNSNKQIISENNEAKYE 445
Query: 189 DPSKNK------------EAESELNRVIKKS--------MFEKMKIVGQFNLGFIIVKYD 228
P +K + ES+LN VIK S F +KI+GQ+N +I+ +Y
Sbjct: 446 TPYTSKSNQYENSCKCETDNESKLN-VIKTSDLAKEKIPKFPAIKIIGQYNKTYILGEYA 504
Query: 229 SDLFIIDQHATDEKYNFETLQ---KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKN 285
L++IDQHA EK FE I Q L++P + L+ + ++N VF +
Sbjct: 505 GTLYMIDQHAAHEKIMFEKYLNDINCGDIIIQPLMIPTVIDLSMDDYSYFEENKDVFKEA 564
Query: 286 GFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLF-MLQHTNSTEHCRPSRIRA-MFA 343
G F+ + ++ L +P LG+ + L +L + + + + ++ A
Sbjct: 565 G--FTIEEFGGTSIALKEVPY----FLGKLKPKNLFLEILDNLKNLGSGKTTEVKYNAIA 618
Query: 344 SRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
++AC+ +V +L EM L+ + ID P+
Sbjct: 619 TKACKSAVKGNDSLDELEMVKLIEELRYIDDPF 651
>gi|302391924|ref|YP_003827744.1| DNA mismatch repair protein MutL [Acetohalobium arabaticum DSM
5501]
gi|302204001|gb|ADL12679.1| DNA mismatch repair protein MutL [Acetohalobium arabaticum DSM
5501]
Length = 660
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 87/384 (22%), Positives = 169/384 (44%), Gaps = 41/384 (10%)
Query: 4 VNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYA 62
+++ YH ++P IL I+++ VDVNV P K ++ EK + + ++ + ++ +
Sbjct: 269 ISKAYHTLLAKGRHPIAILTIKLNPVLVDVNVHPTKMEVNFSREKEVASVLQNGVKEALS 328
Query: 63 IGFTV--------DGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSH 114
+ D +++ QD ++E ++ +++ E ++ +
Sbjct: 329 NADLIPEVKLNSKDSTAVSKKDSQDSKQQQELELTKKRKFSSEKNKKKSQKKEKSTQKTT 388
Query: 115 EANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQ 174
N +S +T D +ET E D + R+ + L I + +A Y ++ Q
Sbjct: 389 NDNQDKSIQT---DQINETKESSDRI------NRKESAEELKNGIEKQSKQADYFQKREQ 439
Query: 175 AQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFII 234
+ ++ +N+ I KE++S+ N+ +GQ + +II + + +I+
Sbjct: 440 SNEKEKKNKESVAI-----KESQSDYNKDDATKSLSSFLPLGQIHNTYIIAQGEDGFYIV 494
Query: 235 DQHATDEKYNFETLQ---KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSF 291
DQHA E+ + L K IKSQ L++P L LT IL++N GFE F
Sbjct: 495 DQHAAHERILYNELMEKFKQAEIKSQSLLMPVRLELTNPEIEILEENSEHLKNLGFE--F 552
Query: 292 DSSDDGNVLLTSLPMSKNTTLGREDIEELLF-----MLQHTNSTEHCRPSR-IRAMFASR 345
++ L+ ++P L + DI+EL +L E P+ I +
Sbjct: 553 EAFGGQTYLVRAVP----NLLHKLDIKELCLDIIDNLLDKGKIQE---PTEIIEDLLVIM 605
Query: 346 ACRKSVMIGRALSVGEMTGLVRNM 369
+CR ++ G++L GEM L++ +
Sbjct: 606 SCRGAIKSGKSLVPGEMESLLQQL 629
>gi|392960660|ref|ZP_10326126.1| DNA mismatch repair protein mutL [Pelosinus fermentans DSM 17108]
gi|421054582|ref|ZP_15517549.1| DNA mismatch repair protein MutL [Pelosinus fermentans B4]
gi|421057356|ref|ZP_15520200.1| DNA mismatch repair protein mutL [Pelosinus fermentans B3]
gi|421065505|ref|ZP_15527246.1| DNA mismatch repair protein mutL [Pelosinus fermentans A12]
gi|421071445|ref|ZP_15532563.1| DNA mismatch repair protein mutL [Pelosinus fermentans A11]
gi|392440684|gb|EIW18353.1| DNA mismatch repair protein MutL [Pelosinus fermentans B4]
gi|392447072|gb|EIW24335.1| DNA mismatch repair protein mutL [Pelosinus fermentans A11]
gi|392454796|gb|EIW31615.1| DNA mismatch repair protein mutL [Pelosinus fermentans DSM 17108]
gi|392458759|gb|EIW35253.1| DNA mismatch repair protein mutL [Pelosinus fermentans A12]
gi|392463264|gb|EIW39234.1| DNA mismatch repair protein mutL [Pelosinus fermentans B3]
Length = 606
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 80/381 (20%), Positives = 148/381 (38%), Gaps = 73/381 (19%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K ++ YH YP +LN+ + D++DVNV P K ++ E+ + V + +
Sbjct: 269 KALDNAYHSLLPKSGYPLAVLNLSVPTDTIDVNVHPQKSEVKFSDEQKIFRAVYKAVIEV 328
Query: 61 YAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEA-NLQ 119
+ D + +PSS +SH A N
Sbjct: 329 LSAPHAPDQLAATVEFKPNPSS-----------------------------YSHSASNPY 359
Query: 120 QSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRC 179
+ + +P ++ ++ S Q TP L L++++D L+
Sbjct: 360 TNNDYKKPSYNAASVPIV--------SSWQETP--LPLNVVRDTLEKEEMM--------- 400
Query: 180 VENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHAT 239
S + A + ++ + + S F + +GQ + FII K L+IIDQHA
Sbjct: 401 -----------SFDTPAPNVISTITEDSQF-TLYPLGQVDDCFIISKGPDGLYIIDQHAA 448
Query: 240 DEKYNFETL-QKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGN 298
E+ ++ + Q T I SQ+L+VP L I+ + FYK GF +
Sbjct: 449 HERILYDKMSQHTERIPSQQLLVPLFLDFDTTEINIISEYHDTFYKLGFTLELAGPNTMR 508
Query: 299 V--LLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIR-AMFASRACRKSVMIGR 355
+ L + +P+S+ R+ +L++ + P +R +CR ++ G
Sbjct: 509 LSELPSDIPLSETEAAIRQ-------ILEYIQNMHDPNPQELRHHCLQIASCRAAIKAGE 561
Query: 356 ALSVGEMTGLVRNMGRIDQPW 376
L++ +M L+ + P+
Sbjct: 562 TLNMRQMQALIGELCNTHLPY 582
>gi|333907812|ref|YP_004481398.1| DNA mismatch repair protein mutL [Marinomonas posidonica
IVIA-Po-181]
gi|333477818|gb|AEF54479.1| DNA mismatch repair protein mutL [Marinomonas posidonica
IVIA-Po-181]
Length = 638
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/366 (20%), Positives = 152/366 (41%), Gaps = 50/366 (13%)
Query: 13 NHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNM 72
N ++P +L +E+ +VDVNV P K ++ +L+ + I + A ++
Sbjct: 282 NGRHPTFVLYLELDPSTVDVNVHPTKHEVRFRDGRLVHDFLFSRIHKAIA--------DV 333
Query: 73 NQSMEQDPSSDVDMEKIQRSNSEEVEHETIPV---PSEDNSNFSHEANLQQSPETVEPDT 129
+ P+ D ++ S E +P+ P+ + ++ + + +P T
Sbjct: 334 RPESDSAPTGVTDSQENTVSIGAMSEQSALPLVNRPANNGMDWMRQTGVASNP------T 387
Query: 130 PDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANID 189
D +D M RL G + T +D ++K+ I
Sbjct: 388 GDSIRNQLDGMQRLSGYAQDFASATEQVDPETGEIKS---------------------IS 426
Query: 190 PSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQ 249
++ +++N + + V Q + +I+ + + L ++D HA E+ +E ++
Sbjct: 427 VPSSESVFTQVNEGNYQKVPPLGYAVAQIHGVYILSESEQGLIVVDMHAAHERIVYERMK 486
Query: 250 KTTL---IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPM 306
I +Q L+VP N+ +++ +++++ VF F F + + +V++ +P+
Sbjct: 487 NAFYEKSIATQPLLVPINISVSQSEADLVEESGAVF--EAFGFRVERTGLESVMVREVPI 544
Query: 307 SKNTTLGREDIEELLFML---QHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMT 363
L R D+E L+ + N SR + AS AC +V R L++ EM
Sbjct: 545 ----ILIRGDVENLVRDVISDLSANGVSDLLESRANELMASMACHGAVRANRKLTIAEMN 600
Query: 364 GLVRNM 369
L+R+M
Sbjct: 601 SLLRDM 606
>gi|448319422|ref|ZP_21508919.1| DNA mismatch repair protein MutL [Natronococcus amylolyticus DSM
10524]
gi|445607675|gb|ELY61552.1| DNA mismatch repair protein MutL [Natronococcus amylolyticus DSM
10524]
Length = 731
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 79/413 (19%), Positives = 153/413 (37%), Gaps = 49/413 (11%)
Query: 10 QFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY-AIGFTVD 68
Q +YPF++L +++ ++VDVNV P KR++ D + + V + + G
Sbjct: 292 QLGGDRYPFVVLFLDVPGEAVDVNVHPRKREVRFDDDDAVRRQVDAAVESALLEHGLLRS 351
Query: 69 GNNMNQSM-------------------------EQDP---------------SSDVDMEK 88
G +S +QD +SD + +
Sbjct: 352 GAPRGRSAPDEARLEPGGSGSGSGGRPAAAGPGQQDSSSSSERPTSREGDAEASDGESDD 411
Query: 89 IQRSNSEEVEHETIPV-PSEDNSNFSHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSY 147
+S+ + E P P D + +A S + P T D+ +V D PR +
Sbjct: 412 TDAVDSQAADAEPAPASPDSDEGARTDDARATDSTDDGSP-TTDDAEDVTADAPRDSSTA 470
Query: 148 RQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKS 207
T V + + + + +D +R + + E+ V +
Sbjct: 471 GAETAVEQNNQVAEPTTDPDSSSDGSARRDEADSSRRFSGPTEQRTLGGEAANGEVSEFD 530
Query: 208 MFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL--IKSQKLVVPQNL 265
++++GQ+ + + + L +IDQHA DE+ N+E L++ +Q L P L
Sbjct: 531 SLPSLQVLGQYRDTYFVCESPDGLVLIDQHAADERVNYERLREAFADDPAAQSLASPVEL 590
Query: 266 HLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELL--FM 323
LT + + GF + +D+ V +T++P TL E + ++L F+
Sbjct: 591 ELTAAEAEAFESYREALTRLGFH--ANRTDNRTVAVTTVPAVLEETLEPERLRDVLTSFI 648
Query: 324 LQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+ + AC S+ +L+ G + L+ + + P+
Sbjct: 649 EGDREAGAETIDALADEFLGDLACYPSITGNTSLTEGSVVDLLAALDDCENPY 701
>gi|331084835|ref|ZP_08333923.1| hypothetical protein HMPREF0987_00226 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330410929|gb|EGG90351.1| hypothetical protein HMPREF0987_00226 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 691
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 178/420 (42%), Gaps = 64/420 (15%)
Query: 2 KLVNEVYHQFN-NHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDH--------------- 45
K + + Y F H+YPF +L+ + +DVNV P K ++
Sbjct: 266 KAIEDAYKGFTMQHKYPFTVLHFTIDGTDLDVNVHPTKMEVRFSKQQEVYNFIYNTLKDA 325
Query: 46 --EKLLLATVKVHITDSYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIP 103
EK L+ V++ + + + T ++ S+ DV +K +E+V E +P
Sbjct: 326 LSEKELIPRVELSVAEPVSQKSTFLEKAVSPSV-----PDVLPDK----KNEKVFVEKLP 376
Query: 104 VPSEDNSNFSHEANL----QQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDI 159
+ S E NL ++ E V + + D G YR LS D
Sbjct: 377 QEARYAEAPSEEKNLDYFMKKMRERVTAYHNQSSQAEVKDR---GGLYRNQ----LSTDR 429
Query: 160 IQDQLKARYARRTVQAQDRCVENRFHANIDPSKN--------------KEAE--SELN-- 201
I++ R ++ Q V+ + + D +N KEAE ++LN
Sbjct: 430 IKEAAAYRAEQKKQFGQSEKVQEKIYRKEDKRENLQETPQEIARLQTPKEAEEDTQLNFF 489
Query: 202 --RVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFE-TLQ--KTTLIKS 256
+++ K ++ +VGQ + IV+Y ++IIDQHA E+ +E TL+ K S
Sbjct: 490 DQKLLSKEAKQEYTLVGQVFETYWIVEYRDQMYIIDQHAAHERVLYERTLKRMKEKQFTS 549
Query: 257 QKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGRED 316
Q++ P L+L+ + +L +++ F K GFE D V ++P + + ++
Sbjct: 550 QRISPPIVLNLSMQEEQLLSEHMENFTKIGFEIEPFGGDSYAV--RAVPDNLFSIAKKDL 607
Query: 317 IEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+ E+L L + ST + P + AS +C+ +V LS E+ L+ + +D P+
Sbjct: 608 LIEMLDSLSDSIST-NLAPDIVLEKIASMSCKAAVKGNSRLSGREVDALIGELLELDNPY 666
>gi|290560158|pdb|3H4L|A Chain A, Crystal Structure Of N Terminal Domain Of A Dna Repair
Prote
gi|290560159|pdb|3H4L|B Chain B, Crystal Structure Of N Terminal Domain Of A Dna Repair
Prote
Length = 367
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 40/61 (65%)
Query: 1 MKLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
+K NEVY FNN Q+P + LN+E+ +DVNVTPDKR I + +E+ ++ K ++D
Sbjct: 298 LKCCNEVYKTFNNVQFPAVFLNLELPMSLIDVNVTPDKRVILLHNERAVIDIFKTTLSDY 357
Query: 61 Y 61
Y
Sbjct: 358 Y 358
>gi|340776394|ref|ZP_08696337.1| DNA mismatch repair protein MutL [Acetobacter aceti NBRC 14818]
Length = 621
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 78/159 (49%), Gaps = 17/159 (10%)
Query: 222 FIIVKYDSDLFIIDQHATDEKYNFETLQKTTL---IKSQKLVVPQNLHLTKINQCILKDN 278
I V D ++ ++DQHA E+ E L++ L I++Q+L+VP + L++ +L
Sbjct: 438 IIAVTADDNMVLVDQHAAHERLTHEVLREQFLSGTIRAQRLLVPDVVELSRSQADLLVSR 497
Query: 279 LPVFYKNGFEFSFDSSDDGNVLLTSLPM----SKNTTLGREDIEEL----LFMLQHTNST 330
K G + + G VL+ SLP + L R+ EEL L ++ T +
Sbjct: 498 ADALSKLGID--LEPFGAGAVLVRSLPALLGNASAVNLLRDLAEELDADDLASIEETPTL 555
Query: 331 EHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
+ +R+ A+ A AC S+ GR L++ EM L+R M
Sbjct: 556 D----ARLDAVIARMACHGSIRAGRNLTIPEMNALLRRM 590
>gi|325661607|ref|ZP_08150231.1| hypothetical protein HMPREF0490_00965 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325472134|gb|EGC75348.1| hypothetical protein HMPREF0490_00965 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 691
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 178/420 (42%), Gaps = 64/420 (15%)
Query: 2 KLVNEVYHQFN-NHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDH--------------- 45
K + + Y F H+YPF +L+ + +DVNV P K ++
Sbjct: 266 KAIEDAYKGFTMQHKYPFTVLHFTIDGTDLDVNVHPTKMEVRFSKQQEVYNFIYNTLKDA 325
Query: 46 --EKLLLATVKVHITDSYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIP 103
EK L+ V++ + + + T ++ S+ DV +K +E+V E +P
Sbjct: 326 LSEKELIPRVELSVAEPVSQKSTFLEKAVSPSV-----PDVLPDK----KNEKVFVEKLP 376
Query: 104 VPSEDNSNFSHEANL----QQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDI 159
+ S E NL ++ E V + + D G YR LS D
Sbjct: 377 QEARYAEAPSEEKNLDYFMKKMRERVTAYHNQSSQAEVKDR---GGLYRNQ----LSTDR 429
Query: 160 IQDQLKARYARRTVQAQDRCVENRFHANIDPSKN--------------KEAE--SELN-- 201
I++ R ++ Q V+ + + D +N KEAE ++LN
Sbjct: 430 IKEAAAYRAEQKKQFGQSEKVQEKIYRKEDKRENLQETSQEIARLQTPKEAEEDTQLNFF 489
Query: 202 --RVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFE-TLQ--KTTLIKS 256
+++ K ++ +VGQ + IV+Y ++IIDQHA E+ +E TL+ K S
Sbjct: 490 DQKLLSKEAKQEYTLVGQVFETYWIVEYRDQMYIIDQHAAHERVLYERTLKRMKEKQFTS 549
Query: 257 QKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGRED 316
Q++ P L+L+ + +L +++ F K GFE D V ++P + + ++
Sbjct: 550 QRISPPIVLNLSMQEEQLLSEHMENFTKIGFEIEPFGGDSYAV--RAVPDNLFSIAKKDL 607
Query: 317 IEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+ E+L L + ST + P + AS +C+ +V LS E+ L+ + +D P+
Sbjct: 608 LIEMLDSLSDSIST-NLAPDIVLEKIASMSCKAAVKGNSRLSGREVDALIGELLELDNPY 666
>gi|121533676|ref|ZP_01665503.1| DNA mismatch repair protein MutL [Thermosinus carboxydivorans Nor1]
gi|121307667|gb|EAX48582.1| DNA mismatch repair protein MutL [Thermosinus carboxydivorans Nor1]
Length = 602
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 87/168 (51%), Gaps = 9/168 (5%)
Query: 212 MKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETL-QKTTLIKSQKLVVPQNLHLTKI 270
++++GQ N FI+ L+IIDQHA E+ +E L Q + +Q+L+VP+ + +
Sbjct: 417 LRVLGQINDCFIVAAGSDGLYIIDQHAAHERILYEHLAQSAGRVPAQQLLVPRVVDFDER 476
Query: 271 NQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLF-MLQHTNS 329
+ ++ N P+FY+ GF + ++ L +P T +IE LL +L ++
Sbjct: 477 DIDLILQNEPLFYELGFR--LEQIGPRSMRLLEVPSDIPGT----EIEGLLREILSALHN 530
Query: 330 TEHCRPSRIRAMFA-SRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+ + IR +F + ACR +V G L++ +M L+ + ++P+
Sbjct: 531 MQTPKAHEIRHIFLQTAACRSAVKAGENLNMRQMQALIDELCSTNRPY 578
>gi|296132999|ref|YP_003640246.1| DNA mismatch repair protein MutL [Thermincola potens JR]
gi|296031577|gb|ADG82345.1| DNA mismatch repair protein MutL [Thermincola potens JR]
Length = 627
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 88/386 (22%), Positives = 152/386 (39%), Gaps = 72/386 (18%)
Query: 8 YHQF-NNHQYPFIILNIEMSRDSVDVNVTPDK---RQIFMDH-EKLLLATVKVHITDSYA 62
YH +YP LNI + + +D NV P K R +D LL + VKV ++ +
Sbjct: 272 YHSLIMTGRYPVAFLNIHLPYNLIDPNVHPAKMEVRLFVLDKISDLLSSAVKVALSSNTL 331
Query: 63 IGFTVDGNNMNQSMEQDPSSDVDMEK---IQRSNSEEVEHETIPVPSEDNSNFSHEANLQ 119
I P + + +EK IQ N + + + V E +L
Sbjct: 332 I----------------PETKIPVEKPSGIQNRNQAQYVQQFLDVDEGHYHGKQAECSLV 375
Query: 120 QSPETVEPDTPDETI--EVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQD 177
+ V + PD +I E D+ + Q P+ + LD+ RR
Sbjct: 376 KEGSPVLAELPDRSIADEPQDEPQKEPQKEPQDIPLNMLLDL---------PRRI----- 421
Query: 178 RCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVK-YDSDLFIIDQ 236
++ N K + ++ +GQ + +I+ + ++ L++IDQ
Sbjct: 422 -----------------SLDTPYNYFPKDKVIAGLRPIGQIDCTYIVAQGREAGLYLIDQ 464
Query: 237 HATDEKYNFE-TLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSD 295
HA E+ +E +Q T SQ L +PQ++ LT + +L N+ F GF D
Sbjct: 465 HAAHERILYEKNMQVPTTNYSQLLAIPQHIELTHLEAQVLITNILEFQAIGFVIEHFGGD 524
Query: 296 DGNVLLTSLPMSKNTTLGRE-----DIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKS 350
+ LL +P G+E D+ + F QH + + R I M +C+ +
Sbjct: 525 --SFLLRGVP--GGFPPGKEKKIFLDLLDYFFSNQHKLTNKELREDLIIMM----SCKAA 576
Query: 351 VMIGRALSVGEMTGLVRNMGRIDQPW 376
+ G L G+M L+ ++ + P+
Sbjct: 577 IKAGDRLLQGQMEKLLADLSNTELPY 602
>gi|354593592|ref|ZP_09011635.1| DNA mismatch repair protein mutL [Commensalibacter intestini A911]
gi|353672703|gb|EHD14399.1| DNA mismatch repair protein mutL [Commensalibacter intestini A911]
Length = 625
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 84/170 (49%), Gaps = 24/170 (14%)
Query: 215 VGQ-FNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL---IKSQKLVVPQNLHLTKI 270
+GQ F + V ++ ++DQHA E+ E L+K L I+SQ L++P+ + L+
Sbjct: 434 IGQIFKTYILAVTAQDEMVMVDQHAAHERLTHEALKKQYLEQGIRSQPLLLPEVIDLSDS 493
Query: 271 N-QCIL--KDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLF-MLQH 326
QC+L KD+L G +S ++L+ +LP LG + LL +++
Sbjct: 494 QLQCLLDFKDSL-----EGLGIEIESFGGKSILVRALPQ----LLGTISAKSLLIDLVEE 544
Query: 327 TNSTEHCRPS-------RIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
+ E P+ R+ A+ + AC SV GR+L++ EM L+R M
Sbjct: 545 LEADEQANPNETESLHLRLDAILSRMACHHSVRAGRSLNMDEMNALLRQM 594
>gi|207341702|gb|EDZ69686.1| YNL082Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 417
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 40/61 (65%)
Query: 1 MKLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
+K NEVY FNN Q+P + LN+E+ +DVNVTPDKR I + +E+ ++ K ++D
Sbjct: 296 LKCCNEVYKTFNNVQFPAVFLNLELPMSLIDVNVTPDKRVILLHNERAVIDIFKTTLSDY 355
Query: 61 Y 61
Y
Sbjct: 356 Y 356
>gi|308161091|gb|EFO63551.1| Pms1-like protein [Giardia lamblia P15]
Length = 726
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 97/234 (41%), Gaps = 45/234 (19%)
Query: 185 HANIDPSK------NKEAESELNRVIKKSM--------FEKMKIVGQFNLGFIIVKYDSD 230
H N+DP K + E + + V ++ F +K + Q+N F+I + ++
Sbjct: 456 HENLDPIKIEGQSCDSEGKVRIGPVRRRGSTSGFRQQDFANLKYICQYNQSFLIAQLNNV 515
Query: 231 LFIIDQHATDEKYNFETLQKT--TLIKSQKLVVPQNLHLTKINQCILKDNLP--VFYKNG 286
++IDQHA E +F + QK + P L L + L++ L VF G
Sbjct: 516 FYLIDQHAAHEAKHFSNYWHNPHCYLSKQKTITPLRLILRPDEKLCLEEFLSSVVFDTIG 575
Query: 287 FEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFML-------------QHTNSTEH- 332
FE + +VL++S P TL ED E L L + T S
Sbjct: 576 FELRM---SENHVLISSFPSLFGQTLTEEDFREYLLSLYGYTREYVESICTKDTGSKTRE 632
Query: 333 ----C------RPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
C P +IR +FAS++C+ S+ +G L ++ ++ ++P+
Sbjct: 633 NSLLCLLHNNIAPPKIRKIFASKSCKASIRLGDPLLDSTAKRVIADLASCEKPF 686
>gi|374618977|ref|ZP_09691511.1| DNA mismatch repair protein MutL [gamma proteobacterium HIMB55]
gi|374302204|gb|EHQ56388.1| DNA mismatch repair protein MutL [gamma proteobacterium HIMB55]
Length = 628
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 78/161 (48%), Gaps = 12/161 (7%)
Query: 215 VGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL---IKSQKLVVPQNLHLTKIN 271
V + +I+ + + + ++D HA E+ +E L+ + Q L+VP +LHLT
Sbjct: 442 VAHLHGAYIVAQNANGMVLVDAHAAHERITYERLKAARAANGLARQPLLVPISLHLTSGE 501
Query: 272 QCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLF-MLQHTNST 330
++ F +G + + + +VL+ +P+ L R++ E+L+ +L
Sbjct: 502 MAAFEEFSSAF--DGLGLVVEIAGENSVLIREIPV----ILARDNAEQLVRDVLADLAEV 555
Query: 331 EHC--RPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
H +RI + A+ AC S+ RALS+ EM L+R+M
Sbjct: 556 GHSDRLSARIDEILATMACHGSIRANRALSISEMNALLRDM 596
>gi|365840338|ref|ZP_09381530.1| DNA mismatch repair protein [Anaeroglobus geminatus F0357]
gi|364561542|gb|EHM39434.1| DNA mismatch repair protein [Anaeroglobus geminatus F0357]
Length = 629
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 78/380 (20%), Positives = 154/380 (40%), Gaps = 42/380 (11%)
Query: 1 MKLVNEVYHQ-FNNHQYPFIILNIEMSRDSVDVNVTPDKRQI-FMDHEKLLLATVKVHIT 58
K + YH YPF IL + + ++DVNV P K +I F D +++ A IT
Sbjct: 266 FKAIENAYHAMLPKTGYPFAILYLHIDPAAIDVNVHPAKTEIKFADEQRVYRAVYHSIIT 325
Query: 59 DSYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANL 118
M Q + ++ ++ S + ++ E P+E FS +
Sbjct: 326 -----------ALMGQEKPEQVATPANL-----SPRQVLKAELAAAPTE--FAFSGQ--- 364
Query: 119 QQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDR 178
+TP + + MP + Q + L D A + R + A
Sbjct: 365 ---------NTPADIVRETGPMPAGDKAALQHGYIPLKKDAAAPYRPAAHVR--LYAAGN 413
Query: 179 CVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHA 238
+ + + E E + +F + +V +I+ K DL+I+DQHA
Sbjct: 414 TLSDVLEGRREMPVPAEKEESIAFEGDAELFVPLGVVADC---YILAKKGEDLYIVDQHA 470
Query: 239 TDEKYNFETL-QKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDG 297
E+ ++ ++ + SQ+L+ + + + + + + VF G+ +S +
Sbjct: 471 AHERVRYDKFCRRAGAMPSQQLLTAEFVEVDAHDMELFAERADVFTDLGYTYS--EAGPA 528
Query: 298 NVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRAL 357
+ + ++P T+ + ++E+ +L + +T+ R R++ A +CR +V G L
Sbjct: 529 TLRIEAVPADLPTSCIADSLQEICRILHESPTTDKAV-LRHRSL-AYLSCRGAVKAGDRL 586
Query: 358 SVGEMTGLVRNMGRIDQPWV 377
+V EM L+ + + P+V
Sbjct: 587 TVREMKELLEALFHTETPYV 606
>gi|328953244|ref|YP_004370578.1| DNA mismatch repair protein mutL [Desulfobacca acetoxidans DSM
11109]
gi|328453568|gb|AEB09397.1| DNA mismatch repair protein mutL [Desulfobacca acetoxidans DSM
11109]
Length = 586
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 77/170 (45%), Gaps = 19/170 (11%)
Query: 209 FEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKS--QKLVVPQNLH 266
F ++KI+GQ +I+ + L I+DQHA E+ FE L ++ Q L+ P L
Sbjct: 395 FAELKIIGQLQETYILAQAPDGLLIVDQHAAHERILFENLSQSWGKSGARQTLLFPVTLE 454
Query: 267 LTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEEL------ 320
L + D+LPV G E + LL ++P T L +D+E L
Sbjct: 455 LDAASAAWSIDHLPVLQAAGME--LEPFGGNTFLLRTVP----TCLSGQDLESLAPEMIA 508
Query: 321 -LFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
L ++ + E R R + + +CR ++ G++LS EM L+ +
Sbjct: 509 ELSPIKSSGDGETLR----RQLLLTMSCRGAIKAGQSLSPEEMHHLLAQL 554
>gi|329114388|ref|ZP_08243150.1| DNA mismatch repair protein MutL [Acetobacter pomorum DM001]
gi|326696464|gb|EGE48143.1| DNA mismatch repair protein MutL [Acetobacter pomorum DM001]
Length = 646
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 74/162 (45%), Gaps = 23/162 (14%)
Query: 222 FIIVKYDSDLFIIDQHATDEKYNFETLQKTTL---IKSQKLVVPQNLHLTKINQCILKDN 278
+ V D L ++DQHA E+ E L+ L +++Q+L+VP + L ++ +L
Sbjct: 463 ILAVAADGSLVLVDQHAAHERLTHERLRAQFLSGHVQAQRLLVPDVVDLPRVQVELLLAR 522
Query: 279 LPVFYKNGFEFSFDSSDDGNVLLTSLPM----SKNTTLGREDIEELLFMLQHTNSTEHCR 334
P K G E D +VL+ +LP S L R+ +EL + E+
Sbjct: 523 QPTLEKLGVEIEAFGGD--SVLVRALPAMLRSSDAVNLLRDLADEL-------EADENGA 573
Query: 335 P-------SRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
P R+ A+ A AC S+ GR LSV EM L+R M
Sbjct: 574 PDEMAALDGRLDAVIARMACHGSIRAGRRLSVEEMNALLRQM 615
>gi|393774505|ref|ZP_10362867.1| DNA mismatch repair protein MutL [Novosphingobium sp. Rr 2-17]
gi|392719988|gb|EIZ77491.1| DNA mismatch repair protein MutL [Novosphingobium sp. Rr 2-17]
Length = 603
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 76/163 (46%), Gaps = 13/163 (7%)
Query: 216 GQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKT----TLIKSQKLVVPQNLHLTKIN 271
GQ +I+ + + L I+DQHA E+ E L+ + +SQ L++P+ + L +
Sbjct: 418 GQVAQTYIVAEAEDGLVIVDQHAAHERLVLERLRAAGAEDAVTRSQALLLPEVVELEETA 477
Query: 272 QCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQ---HTN 328
L+D L ++G + +L+ ++P + LG+ D+ L+ + N
Sbjct: 478 CDALEDKLADLARHGL--VLERFGPAAMLVRAVP----SVLGKSDVAALVRDVADDLARN 531
Query: 329 STEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGR 371
++ + A+ AC SV GR LSV EM L+R M R
Sbjct: 532 GDALLLGEKLDLVLATMACHGSVRAGRVLSVAEMNALLREMER 574
>gi|440782000|ref|ZP_20960228.1| DNA mismatch repair protein [Clostridium pasteurianum DSM 525]
gi|440220718|gb|ELP59925.1| DNA mismatch repair protein [Clostridium pasteurianum DSM 525]
Length = 630
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 77/372 (20%), Positives = 159/372 (42%), Gaps = 54/372 (14%)
Query: 14 HQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHE----KLLLATVKVHITDSYAIGFTVDG 69
++YPF +L +++ + +DVNV P K +I ++ KL+ V I +S+ F +
Sbjct: 279 NKYPFFVLFLDIYPEFIDVNVHPTKSEIKFQNDREIFKLVFDAVHEAIKESFKDNFDFNI 338
Query: 70 NNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDT 129
N +D+ K + E++ E I +P + SHE N++ E +
Sbjct: 339 ENT-----------IDLSK---ESPLEIKRENIQIPIDLK---SHE-NIRIDEEF--KNG 378
Query: 130 PDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANID 189
P+E++ + + + ++L + + + EN+ +
Sbjct: 379 PEESVSIF-------STNEDNKKISLK------------DNKDISVSEEVFENKVSSYTS 419
Query: 190 PSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQ 249
N + S + K F ++++GQ++ +I+ + D ++IDQHA EK F+
Sbjct: 420 EINNNLSTSNDGDELVKPKFPDLRVIGQYHNTYILAESTEDFYLIDQHAAHEKILFQKYS 479
Query: 250 KTT---LIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPM 306
K + +Q L+ P+ + ++ + +N +F G F+ + D + + +P
Sbjct: 480 KEIKEGKVTAQILLTPEVIEMSPEDFIQYIENKDIFSNAG--FNIEVFGDNTISIREVP- 536
Query: 307 SKNTTLGREDIEELLF-MLQHTNSTEHCRPSRIRA-MFASRACRKSVMIGRALSVGEMTG 364
LG+ ++ L ML + + ++ A+ AC+ ++ LS+ EM
Sbjct: 537 ---NFLGKPQLKNLFSDMLDNLKNLGSGETYEVKYNKIATIACKAAIKANDYLSLEEMKS 593
Query: 365 LVRNMGRIDQPW 376
LV + ID+P+
Sbjct: 594 LVEQLRYIDEPF 605
>gi|170574153|ref|XP_001892689.1| DNA mismatch repair protein MutL containing protein [Brugia malayi]
gi|158601598|gb|EDP38475.1| DNA mismatch repair protein MutL containing protein [Brugia malayi]
Length = 678
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 41/61 (67%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
++ NEVY Q+N QY +IL I++ +S+DVNV PDKR +F + EK L A ++ + ++
Sbjct: 302 RIANEVYQQYNRGQYCMLILFIDVPPESIDVNVAPDKRSVFFEREKELFALLRASLLATF 361
Query: 62 A 62
A
Sbjct: 362 A 362
>gi|402496552|ref|YP_006555812.1| DNA mismatch repair ATPase MutL [Wolbachia endosymbiont of
Onchocerca ochengi]
gi|398649825|emb|CCF77995.1| DNA mismatch repair ATPase MutL [Wolbachia endosymbiont of
Onchocerca ochengi]
Length = 621
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 84/175 (48%), Gaps = 23/175 (13%)
Query: 210 EKMKIVGQFNLGF---------IIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLV 260
E++ ++ + LGF II + L IIDQHA E+ +E L+K + IK QKL
Sbjct: 424 EQINLIESYPLGFARCQVYNIYIIAEARDKLIIIDQHAAHERLIYECLKKKSSIKRQKLF 483
Query: 261 VPQNLHLTKINQCILKDNLPVFYKNG-FEFSFD--SSDDGNVLLTSLPMSKNTTLGREDI 317
P+ + + NQ ++ + YKN FE FD + V+ +P LG D+
Sbjct: 484 FPEVVEIK--NQTGME--MVEIYKNKLFEIGFDIEIKSENEVIAREIP----AILGTIDV 535
Query: 318 EELLF-MLQHTNSTEHCRP--SRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
+E+L ++ E P ++ + A+ AC S+ GR + + EM L+R M
Sbjct: 536 KEMLMNIVDRLTEIEDTLPIEDKVNKILATIACYGSIRAGRKMRLEEMNMLLRQM 590
>gi|435852398|ref|YP_007313984.1| DNA mismatch repair protein MutL [Methanomethylovorans hollandica
DSM 15978]
gi|433663028|gb|AGB50454.1| DNA mismatch repair protein MutL [Methanomethylovorans hollandica
DSM 15978]
Length = 612
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 84/172 (48%), Gaps = 17/172 (9%)
Query: 212 MKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKIN 271
+K++GQF ++I + + L +IDQHA E+ +E + + + Q+L+ P L L
Sbjct: 426 VKVMGQFGDLYVIAEVEKKLLLIDQHAAHERVMYERVMDSRDMGWQELLNPVTLELNPKE 485
Query: 272 QCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTE 331
+ IL++ +P + GF S D ++T++P T GR + +++ H ++
Sbjct: 486 RVILEEFIPYLEEVGFSISEFGPD--TYVVTTVP----TIFGRMESPDVV----HDIVSD 535
Query: 332 HCRPSRIR-------AMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
RI+ +F++ ACR ++ G + +M L+R + + P+
Sbjct: 536 LLSVGRIKDDTEIYDHVFSTMACRAAIKAGAVCNKEQMADLIRQLKKCKNPY 587
>gi|323691986|ref|ZP_08106234.1| DNA mismatch repair protein MutL [Clostridium symbiosum WAL-14673]
gi|323503909|gb|EGB19723.1| DNA mismatch repair protein MutL [Clostridium symbiosum WAL-14673]
Length = 684
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 92/403 (22%), Positives = 163/403 (40%), Gaps = 35/403 (8%)
Query: 2 KLVNEVYHQFN-NHQYPFIILNIEMSRDSVDVNVTPDKRQI-FMDHE---KLLLATVKVH 56
K + + Y F H+YPF +L + + +DVNV P K ++ F D E +++ T+ +
Sbjct: 266 KAIEDAYKPFMMQHKYPFTMLQFTIEPEFLDVNVHPAKMELRFRDGEMVYRMVYHTISMA 325
Query: 57 ITDSYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEA 116
++ I V+ Q + + I+ + E E + S S + E
Sbjct: 326 LSQKELIP-QVELPGGGQESANAQARGLKPVVIKENRPEPFEKRRLQTESLIKSAATSE- 383
Query: 117 NLQQSPET--VEPDTPDETIEVIDDMPRLQGSYRQST--------PVTLSLDIIQDQLKA 166
L PET I DMP + G S P TL + I +A
Sbjct: 384 -LSGEPETSAYTERVSKTAFPAIADMPAVYGRQPASAGMADAAEQPETLRMPGIPKAPEA 442
Query: 167 RYA------RRTVQAQDRCVENRFHANIDPSKNKEAESEL--NRVIKKSMFEKMKIVGQF 218
R V A+ + I P + + +L +++ K + ++GQ
Sbjct: 443 PGPLEFPEHYRPVPAEGKTQNPAGAKEILPKQEPPKQLDLFEEKLLTKQARNEHVLIGQL 502
Query: 219 NLGFIIVKYDSDLFIIDQHATDEKYNFE----TLQKTTLIKSQKLVVPQNLHLTKINQCI 274
+ +V++ +L+IIDQHA EK +E +L+K SQ + P L L+ + +
Sbjct: 503 FDTYWLVQFHDNLYIIDQHAAHEKVLYEKTMASLKKREYT-SQMINPPIILTLSGNEELM 561
Query: 275 LKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCR 334
LK + F GFE + V ++P + + +E + E++ L T+ +
Sbjct: 562 LKKYMEHFTAVGFEIEHFGGKEYAV--RAVPANLFSIAKKELLMEMIDGL--TDGVDQGT 617
Query: 335 PSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPWV 377
P I AS +C+ +V A+S E L+ + ++ P+
Sbjct: 618 PDIINEKIASMSCKAAVKGNHAMSAAEADSLIDELLELENPYA 660
>gi|421851779|ref|ZP_16284472.1| DNA mismatch repair protein MutL [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
gi|371480282|dbj|GAB29675.1| DNA mismatch repair protein MutL [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
Length = 643
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 75/162 (46%), Gaps = 23/162 (14%)
Query: 222 FIIVKYDSDLFIIDQHATDEKYNFETLQKTTL---IKSQKLVVPQNLHLTKINQCILKDN 278
+ V D + ++DQHA E+ E L+ L +++Q+L+VP + L ++ +L
Sbjct: 460 ILAVAADGSVVLVDQHAAHERLTHERLRAQFLSGHVQAQRLLVPDVVDLPRVQVDLLLAR 519
Query: 279 LPVFYKNGFEFSFDSSDDGNVLLTSLPM----SKNTTLGREDIEELLFMLQHTNSTEHCR 334
P K G E D +VL+ +LP S +L R+ +EL + E+
Sbjct: 520 QPTLEKLGVEIEAFGGD--SVLVRALPAMLRSSDAVSLLRDLADEL-------EADENGA 570
Query: 335 P-------SRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
P R+ A+ A AC S+ GR LSV EM L+R M
Sbjct: 571 PDEMAALDGRLDAVIARMACHGSIRAGRRLSVEEMNALLRQM 612
>gi|417925984|ref|ZP_12569397.1| putative DNA mismatch repair protein [Finegoldia magna
SY403409CC001050417]
gi|341590586|gb|EGS33824.1| putative DNA mismatch repair protein [Finegoldia magna
SY403409CC001050417]
Length = 627
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 94/387 (24%), Positives = 159/387 (41%), Gaps = 85/387 (21%)
Query: 13 NHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITD------SYAIGFT 66
N ++P L E++ VDVNV P+K++ VK+ I D + + F
Sbjct: 276 NGRFPLFWLFFEINPKLVDVNVHPNKQK------------VKISILDEILEQLNKKVRFL 323
Query: 67 VDGN----NMNQSM-EQDPSSDVDMEKIQR-SNSEEVEHETIPVPS------EDNSNFSH 114
++ N N++QS+ + D D+ + SN +++ + P+ DNS S+
Sbjct: 324 LENNVRITNISQSIPDDDKYKDLRRNYFESDSNLTNYKYDKVSEPTYSYNLFNDNSKLSN 383
Query: 115 EANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQ 174
N++ E+ E + P + K + + +
Sbjct: 384 LRNIRYKDES----------EAFNKKPEIN--------------------KYFFKEKDIA 413
Query: 175 AQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVK--YDSDLF 232
QD N F I+ K ES L + +EK I+ +I+ K YDS ++
Sbjct: 414 KQD----NFFLDEIEQIK---VESYLAK------YEKFDILTVLFKTYILAKDEYDSKIY 460
Query: 233 IIDQHATDEKYNFETLQKTTLIK---SQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEF 289
+ DQHA E+ N+E L K L K SQ L P N+ LT I +N +F + G+E
Sbjct: 461 LFDQHACHERINYEKLTKQMLDKEVVSQNLAFPINISLTDELMEIYTNNKSIFEELGYE- 519
Query: 290 SFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRP-SRIRAMFASRACR 348
D D +V++ ++P G + E L + T + P I + R+C+
Sbjct: 520 -SDVFSDDSVVVRAVPY----LFGNSNAEFLFTDILDTIAKNSNDPFDVIESKVIKRSCK 574
Query: 349 KSVMIGRALSVGEMTGLVRNMGRIDQP 375
SV G LS E+ L+ ++ + + P
Sbjct: 575 MSVKAGDTLSNFEIIKLLEDLFKCEYP 601
>gi|261406194|ref|YP_003242435.1| DNA mismatch repair protein MutL [Paenibacillus sp. Y412MC10]
gi|261282657|gb|ACX64628.1| DNA mismatch repair protein MutL [Paenibacillus sp. Y412MC10]
Length = 660
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 80/390 (20%), Positives = 159/390 (40%), Gaps = 33/390 (8%)
Query: 1 MKLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITD 59
M+ + YH +++P +++ + M +DVNV P K ++ E+ L A V+ +
Sbjct: 265 MQAILRGYHTLLPINRFPLVVIQLSMHPSLIDVNVHPSKLEVRFSKEQELFAFVEEEVRK 324
Query: 60 SYAIGFTVD-------GNNMNQSMEQD---PSSDVDMEKIQRSNSEEVEHETIPVPSEDN 109
+ G + N +++ P + D+ + ++E +P D
Sbjct: 325 VLQQEILIPRPAKQNIGKSNNAYIQEQLSFPQAQGDVGAARGGQDRDLE-----IPGSDE 379
Query: 110 SNFSHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYA 169
+ L +P PD +T+ + ++ SY T T + Q++ A
Sbjct: 380 RSAGGNTPLP-TPPAAWPD--KQTLATSPNC--IKRSYGDGTAETAA----ASQMRETAA 430
Query: 170 RRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDS 229
+ ++ R E R A I + ++ + F ++ ++GQ + ++I + D+
Sbjct: 431 SSSYRSDYRN-EARGGAGIPAVTKEWLQAVSGPAPEIPPFPELTLIGQHHGTYLIAQNDT 489
Query: 230 DLFIIDQHATDEKYNFETLQK---TTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNG 286
L++IDQHA E+ N+E + SQ+L++P L T +KD L F K G
Sbjct: 490 GLYLIDQHAAHERINYEYYYEQFGNPADASQELLLPITLEFTPSESEKVKDRLHWFEKVG 549
Query: 287 FEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRA 346
F L+ S P + IEE+ + + + + + ++ S
Sbjct: 550 VYMEFFGGH--TFLVRSHPFWFPKGEEKAIIEEMAEWVLNERNIDIAKLRETSSIMCS-- 605
Query: 347 CRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
C+ S+ + L+ E L++ +G QP+
Sbjct: 606 CKASIKANQKLTEQEAMTLIQRLGACRQPY 635
>gi|73669014|ref|YP_305029.1| DNA mismatch repair protein MutL [Methanosarcina barkeri str.
Fusaro]
gi|72396176|gb|AAZ70449.1| DNA mismatch repair protein MutL [Methanosarcina barkeri str.
Fusaro]
Length = 692
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 83/175 (47%), Gaps = 17/175 (9%)
Query: 209 FEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLT 268
FE ++I+GQ + +I+ + DL +IDQHA E+ +E + K + Q+L+ P + LT
Sbjct: 503 FENLRIIGQVSKLYILAERGEDLVLIDQHAAHERILYEQVLKMKKSRVQELITPVTIDLT 562
Query: 269 KINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTN 328
+ ++++ +P Y F F D ++T +P GR + E++ H
Sbjct: 563 PKEKVLMEEYIP--YLEDFGFGISEFGDNTYVVTFVP----EVFGRLEDPEVI----HDI 612
Query: 329 STEHCRPSRIR-------AMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
++ +++ + + ACR ++ G A S +M L+ + + + P+
Sbjct: 613 VSDLLASGKVKKDTGISEKICKTLACRAAIKGGAACSPRQMEELIEQLKKAENPY 667
>gi|448610428|ref|ZP_21661174.1| DNA mismatch repair protein MutL [Haloferax mucosum ATCC BAA-1512]
gi|445745052|gb|ELZ96522.1| DNA mismatch repair protein MutL [Haloferax mucosum ATCC BAA-1512]
Length = 566
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 86/184 (46%), Gaps = 12/184 (6%)
Query: 197 ESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQ---KTTL 253
+S L V +S+F+ +++G+F +++ + D DL ++DQHA E+ N+E L+ +T
Sbjct: 362 DSSLEPVAAESVFDDCRVIGRFRELYLLCEADDDLLVVDQHAAHERINYERLRDAVETAG 421
Query: 254 IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLG 313
I+S + P + L+ + +L+ N GF + + DG + ++P LG
Sbjct: 422 IESVAVDPPATVSLSATDAALLESNRDAVEALGFRAA--AFGDGAYRVEAVPAP----LG 475
Query: 314 RE-DIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRI 372
R + L + + + P + AC S+ G L+ E + +V +G
Sbjct: 476 RPFNPAALADAVTDVAAGDASDPR--DELLKDLACHSSIKAGDDLTDEEASQVVERLGAC 533
Query: 373 DQPW 376
+ P+
Sbjct: 534 ETPY 537
>gi|402590038|gb|EJW83969.1| hypothetical protein WUBG_05120, partial [Wuchereria bancrofti]
Length = 505
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 41/61 (67%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
++ NEVY Q+N QY +IL +++ +S+DVNV PDKR +F + EK L A ++ + ++
Sbjct: 302 RIANEVYQQYNRGQYCMLILFVDVPPESIDVNVAPDKRSVFFEREKELFALLRASLLATF 361
Query: 62 A 62
A
Sbjct: 362 A 362
>gi|393245222|gb|EJD52733.1| DNA mismatch repair protein MutL [Auricularia delicata TFB-10046
SS5]
Length = 402
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 39/55 (70%)
Query: 1 MKLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKV 55
++ +NE Y QFN Q PF++LNI + ++ D+NV+PDKR IF+ +E+ + +KV
Sbjct: 299 IRAINETYRQFNATQTPFVVLNIIIPTETCDINVSPDKRTIFLHNEQNFITALKV 353
>gi|448577264|ref|ZP_21642894.1| DNA mismatch repair protein MutL [Haloferax larsenii JCM 13917]
gi|445727909|gb|ELZ79518.1| DNA mismatch repair protein MutL [Haloferax larsenii JCM 13917]
Length = 550
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 82/183 (44%), Gaps = 10/183 (5%)
Query: 197 ESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKT---TL 253
+S L+ V +S+F+ ++++GQF +++ + +L +IDQHA E+ N+E L+
Sbjct: 346 DSSLSPVEAESVFDDVRVIGQFRDLYVLCEVGDELLVIDQHAAHERVNYERLRAAVEEAG 405
Query: 254 IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLG 313
+ S + P N+ L+ +L+ N + GF + + V P LG
Sbjct: 406 VDSVPVDPPANVSLSPPEAALLEANRDAVERLGFRVADFGGETYRVEAVPAP------LG 459
Query: 314 REDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRID 373
R + L + + R R + AC S+ G LSV E T LV +G +
Sbjct: 460 RPFSPDALADVVSDLAAGDVRDPRDE-LLKDLACHPSIKAGDDLSVEEATRLVSRLGSCE 518
Query: 374 QPW 376
P+
Sbjct: 519 TPY 521
>gi|406037668|ref|ZP_11045032.1| mutL [Acinetobacter parvus DSM 16617 = CIP 108168]
Length = 647
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 158/364 (43%), Gaps = 39/364 (10%)
Query: 11 FNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGN 70
+ HQY +L +E+ +++DVNV P K +I +++ + V+ H + F
Sbjct: 286 LHGHQYSSYLLFLEVDPENIDVNVHPTKHEIRFLNQREVHEFVR-HYAKATLSQFQTATA 344
Query: 71 NMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTP 130
++ Q+M+ D ++ +E ++ P + + NL ++ EP
Sbjct: 345 DLAQAMKMDDAA-----------TENFNYQPQP-------KYQEQFNLHRAEVEPEPQL- 385
Query: 131 DETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANIDP 190
++ +E+ D L + QS P + + Q Q + RY+ +VQ + N + + P
Sbjct: 386 NQQVEISTD---LLTEFNQSRPQAVQYNASQPQ-QPRYS-GSVQ-----LNNALKSYLAP 435
Query: 191 SKNKEAESELNRVIKK-SMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQ 249
+ +E +SE ++ + K F + Q + +I+ + L I+D HA E+ + ++
Sbjct: 436 LR-EEVDSEQDQTVAKVDEFPLGIAIAQLHGIYILAQNTEGLIIVDMHAAHERILLQQMK 494
Query: 250 ----KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLP 305
K SQ+L++P+ + +T++ +++ + G E D D V++ +P
Sbjct: 495 AAWDKPEFWTSQQLLIPKIVSITRMQATRVEELQSQLQRLGLE--IDQYGDEQVIVRGVP 552
Query: 306 MSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGL 365
+ I ELL L + R + A AC +V R LS+ EM L
Sbjct: 553 AILHKADFGHLIPELLNDLDPNDEVRGLLQKR-DELLAGMACHGAVRAHRQLSLSEMNAL 611
Query: 366 VRNM 369
+R M
Sbjct: 612 LRQM 615
>gi|295099687|emb|CBK88776.1| DNA mismatch repair enzyme (predicted ATPase) [Eubacterium
cylindroides T2-87]
Length = 370
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 95/193 (49%), Gaps = 22/193 (11%)
Query: 194 KEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL 253
+E ES + + + F +K++GQ +I+ + + L IIDQHA E+Y++E LQ+ TL
Sbjct: 166 QEIES-VEKAVGYEFFYHLKVIGQLKDSYILCENEEGLVIIDQHAAQERYHYEMLQE-TL 223
Query: 254 IKS----QKLVVPQNLH-----LTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSL 304
K Q L++P L ++++N K + F F+ + +++ +
Sbjct: 224 NKPCNNLQPLMLPIQLDVSSNIMSQVNTINEKTSF-------FGLEFEPFGNDQLIVREI 276
Query: 305 PMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRA-MFASRACRKSVMIGRALSVGEMT 363
P+ + +LL + + N + S++R + A+ AC S+ R+L++ EM
Sbjct: 277 PLWFQDVHEEAFLYDLLDLFEKDNEIDM---SKLRKHVLATMACHSSIRFNRSLTMDEMK 333
Query: 364 GLVRNMGRIDQPW 376
++ ++ + QP+
Sbjct: 334 QVIEDLKKCKQPY 346
>gi|224476433|ref|YP_002634039.1| DNA mismatch repair protein [Staphylococcus carnosus subsp.
carnosus TM300]
gi|254766175|sp|B9DPC0.1|MUTL_STACT RecName: Full=DNA mismatch repair protein MutL
gi|222421040|emb|CAL27854.1| putative DNA mismatch repair protein MutL [Staphylococcus carnosus
subsp. carnosus TM300]
Length = 646
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 90/390 (23%), Positives = 167/390 (42%), Gaps = 48/390 (12%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K + E YH +YP +NIEM VDVNV P K ++ + E+ L + I ++
Sbjct: 265 KAIVEGYHTLLTIGRYPICYINIEMDPILVDVNVHPTKLEVRLSKEEQLYQLIVQKIQEA 324
Query: 61 YAIGFTVDGNNMNQSMEQDPSSDV------DMEKIQRSN--SEEVEHETIPVPSEDNSNF 112
+ + N+ N+ +++ DV D E SN +E+ + ET V +E++
Sbjct: 325 FKDKILIPHNDENKLYKKNKVLDVFEQQKLDFENRTASNPPAEKPDEETDRV-NENSDTQ 383
Query: 113 SHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRT 172
+ + N Q S + V+ D L+G+ + S + S
Sbjct: 384 AFQTNEQTSENGSDASYQAGQRAVLQD---LEGNTKNSEGLFDS---------------- 424
Query: 173 VQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLF 232
+ A I+ S++ E+E + ++ + M++VGQ + +II + ++ +F
Sbjct: 425 ----EATSNEAASAEIESSEDDVRETEHAKPHRRVPY--MEVVGQVHGTYIIAQNETGMF 478
Query: 233 IIDQHATDEKYNFETLQKT---TLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEF 289
+IDQHA E+ +E + + Q L++P H +K Q I+ K G
Sbjct: 479 MIDQHAAQERIKYEYFRDKIGEVTNEVQNLLIPMTFHFSKDEQMIINQYKDELDKVGVHL 538
Query: 290 S-FDSSDDGNVLLTSLPMSKNTTLGREDIEELL-FMLQHTNSTEHCRPSRIRAMFA-SRA 346
F S D ++ S P+ +E I++++ ++L+H +IR A +
Sbjct: 539 EPFGSHD---YIVNSYPVWFPKEEAQEIIQDMVEYVLEHRK----VDIKKIREEAAIMMS 591
Query: 347 CRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
C+KS+ L EM L+ + ++ P+
Sbjct: 592 CKKSIKANHYLRNHEMADLIDQLREMEDPF 621
>gi|78044214|ref|YP_360228.1| DNA mismatch repair protein HexB [Carboxydothermus hydrogenoformans
Z-2901]
gi|123756763|sp|Q3ACA6.1|MUTL_CARHZ RecName: Full=DNA mismatch repair protein MutL
gi|77996329|gb|ABB15228.1| DNA mismatch repair protein HexB [Carboxydothermus hydrogenoformans
Z-2901]
Length = 578
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 83/190 (43%), Gaps = 17/190 (8%)
Query: 187 NIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFE 246
N+ S NK+ ELN +++GQF+L +IIV+ + L IIDQHA E+ +E
Sbjct: 381 NLTFSLNKDFAKELN----------FQVIGQFSLKYIIVEKNDKLLIIDQHAAHERILYE 430
Query: 247 TLQ-KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLP 305
Q K SQ L P + + + L++N F + G + G L+ +P
Sbjct: 431 KYQTKLNPFYSQVLTFPVRIKASPELEAFLQENYQNFLEIGLH--IEPFGPGEYLVREIP 488
Query: 306 MSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGL 365
+EE L+ + R ++ AC+ +V G L+ EMT L
Sbjct: 489 EDFPQNNIANVLEEYLYEIMEQKEQVSFREKALKLF----ACKNAVKFGEKLTYSEMTNL 544
Query: 366 VRNMGRIDQP 375
V+ + + + P
Sbjct: 545 VKELFKTNYP 554
>gi|334128877|ref|ZP_08502755.1| DNA mismatch repair protein MutL [Centipeda periodontii DSM 2778]
gi|333386119|gb|EGK57339.1| DNA mismatch repair protein MutL [Centipeda periodontii DSM 2778]
Length = 627
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 150/377 (39%), Gaps = 61/377 (16%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K ++ VY +P +L IE+ + ++DVNV P K ++ + E + V + D+
Sbjct: 268 KAIDNVYRALVPKMGFPLAVLCIEVPQRTIDVNVHPQKIEMKFEDEGRIFKAVYKSVLDA 327
Query: 61 YAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQ 120
T + + S+E+ P + + T P+ N+ H N
Sbjct: 328 IR-SVTGESAAIAASVEK-PKFHCEAVPLNVGTPVSEGPYTARTPTSANT---HTNNYVL 382
Query: 121 SPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKA-RYARRTV-----Q 174
P V P T E + R G + L +QD++ A R RT
Sbjct: 383 PP--VRPQTVHEAV-------RWSGQR-------VDLRAVQDRVAAARSEERTALVAAAS 426
Query: 175 AQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFII 234
AQ+ +E N+ P +GQ +L +II + L+I+
Sbjct: 427 AQEEGIE--MEGNLLP------------------------IGQVDLTYIIAQSAQSLYIV 460
Query: 235 DQHATDEKYNFETLQ-KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDS 293
DQHA E+ F+ + I SQ+++V L + +N +F + GF +S
Sbjct: 461 DQHAAHERILFDRFSAQADGIPSQQMLVHAILSFDAREAQYIDENAELFDRLGFH--LES 518
Query: 294 SDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIR-AMFASRACRKSVM 352
+ + LT +P T + I E+L L ++ P+ +R A A+ ACR ++
Sbjct: 519 AGERTYRLTEVPADIPTDEAEDIIREILISLGDLHA---ATPANLRQAGIATMACRAAIK 575
Query: 353 IGRALSVGEMTGLVRNM 369
G L+V +M L+ +
Sbjct: 576 AGEELNVRQMEILLEEL 592
>gi|414341883|ref|YP_006983404.1| DNA mismatch repair protein MutL [Gluconobacter oxydans H24]
gi|411027218|gb|AFW00473.1| DNA mismatch repair protein MutL [Gluconobacter oxydans H24]
gi|453329960|dbj|GAC87938.1| DNA mismatch repair protein MutL [Gluconobacter thailandicus NBRC
3255]
Length = 569
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 80/170 (47%), Gaps = 27/170 (15%)
Query: 218 FNLGFIIVKYDSDLFIIDQHATDEKYNFETLQK---TTLIKSQKLVVPQNLHLTKINQCI 274
F+ I V D DL ++DQHA E+ E L++ + ++SQ L++P+ + L +
Sbjct: 381 FDTYIIAVAPDGDLVLVDQHAAHERLTHERLREQYASGALRSQALLLPEVIDLPRREAEA 440
Query: 275 LKDNLPVFYKNGFEF-SFDSSDDGNVLLTSLPMSKNTTLGREDIEELL------------ 321
L + G + SF S G+VLL S+P LG +D++ LL
Sbjct: 441 LLARSEDLSRLGMDIESFGS---GSVLLRSVP----ALLGTKDVQGLLRDVADELANDPD 493
Query: 322 FMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGR 371
+T+S H R+ A+ A AC S+ GR L EM L+R+M R
Sbjct: 494 LDAGNTDSFSH----RLDAILARMACHGSIRAGRRLKPEEMDALLRDMER 539
>gi|126179894|ref|YP_001047859.1| DNA mismatch repair protein [Methanoculleus marisnigri JR1]
gi|166232097|sp|A3CWX7.1|MUTL_METMJ RecName: Full=DNA mismatch repair protein MutL
gi|125862688|gb|ABN57877.1| DNA mismatch repair protein MutL [Methanoculleus marisnigri JR1]
Length = 585
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 80/177 (45%), Gaps = 13/177 (7%)
Query: 206 KSMFEKMKIVGQFNLGFIIVK-YDSDLFIIDQHATDEK--YNFETLQKTTLIKSQKLVVP 262
+++ M+ +GQ +I+ + D L+++DQHA E+ Y+ T Q+ SQ+L+ P
Sbjct: 392 ENLLPAMEPIGQVAATYIVAEGADGTLYLVDQHAAHERVLYDQVTEQRDKAAGSQELITP 451
Query: 263 QNLHLTKINQCILKDNLPVFYKNGF---EFSFDSSDDGNVLLTSLPMSKNTTLGREDIEE 319
L L L+D +P+ GF EF D+ + +L ++ RE I +
Sbjct: 452 VVLSLPPKESAALRDAIPLLADEGFVVDEFGRDTFAV-RAVPAALGAVEDPGTVRETIAD 510
Query: 320 LLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
L L + T R R+ + ACR +V G L+ + L+ + R PW
Sbjct: 511 L---LADESRTAPDRRERVTCIV---ACRGAVKAGALLTPDQQKRLIMQLARTKTPW 561
>gi|302386430|ref|YP_003822252.1| DNA mismatch repair protein MutL [Clostridium saccharolyticum WM1]
gi|302197058|gb|ADL04629.1| DNA mismatch repair protein MutL [Clostridium saccharolyticum WM1]
Length = 639
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 88/384 (22%), Positives = 159/384 (41%), Gaps = 42/384 (10%)
Query: 2 KLVNEVYHQFN-NHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
+ + E Y F H+YPF +L+ + + +DVNV P K ++ +++ V ++ +
Sbjct: 266 RAIEEAYKPFMMQHKYPFTMLHFSIDPEMLDVNVHPTKMELRFRDGEMIYHMVYQAVSSA 325
Query: 61 YAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQ 120
A E P ++ + ++ E +HE P P E + E QQ
Sbjct: 326 LA------------HKELIPEVKLEKKAEEKKGFLEKKHEPSPEPFEKRRLMAIE---QQ 370
Query: 121 SPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCV 180
+ E E+ P+ + TP SL + +D+L + + +A D
Sbjct: 371 AAAL-------ENKELSIPFPK------RLTPPPASLLMERDELGDNWLKP--KAPDIDS 415
Query: 181 ENRFHANIDPSKNKEAESELN----RVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQ 236
+ SK +E +L+ ++++ K++GQ + +V++ L+IIDQ
Sbjct: 416 QQEVPPVPAVSKQEEKTEQLDLFDGKLLEPKARSMHKLIGQVFDTYWLVEFHEQLYIIDQ 475
Query: 237 HATDEKYNFETLQKTTLIK---SQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDS 293
HA EK +E T K SQ + P L L + + +LK +L F GFE
Sbjct: 476 HAAHEKVLYEKTMGTLKSKEYLSQLVSPPIILTLNQNEEALLKRHLKYFTDIGFEIEPFG 535
Query: 294 SDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMI 353
+ V +P + + +E + E++ L S+ P I AS +C+ +V
Sbjct: 536 GREYAV--RGVPANLFSIAKKELLIEMIDGLSEDGSSH--SPDIIYEKVASLSCKAAVKG 591
Query: 354 GRALSVGEMTGLVRNMGRIDQPWV 377
G LS E L+ + ++ P+
Sbjct: 592 GHRLSAAEANELIDQLLNLENPYA 615
>gi|99034447|ref|ZP_01314447.1| hypothetical protein Wendoof_01000751, partial [Wolbachia
endosymbiont of Drosophila willistoni TSC#14030-0811.24]
Length = 572
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 86/174 (49%), Gaps = 21/174 (12%)
Query: 203 VIKKSMFEKMKIVGQFNLGF---------IIVKYDSDLFIIDQHATDEKYNFETLQKTTL 253
V++K + E++ ++ LGF II + L I+DQHA E+ +E L++ +
Sbjct: 404 VLEKKVLEQVDLIESHPLGFARCQVYNTYIIAEVRDKLIIVDQHAAHERLVYECLKQKSS 463
Query: 254 IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFD--SSDDGNVLLTSLPMSKNTT 311
+K QKL++P+ + + NQ + + + ++ FE FD + V++ +P
Sbjct: 464 VKRQKLLLPETVEIK--NQAGM-EMIEIYKDKLFEMGFDIEIKPENKVIVKEIP----AI 516
Query: 312 LGREDIEELLF-MLQHTNSTEHCRP--SRIRAMFASRACRKSVMIGRALSVGEM 362
LG D++E+L ++ E P ++ + A+ AC S+ GR + + EM
Sbjct: 517 LGAIDVKEMLINIVDRLTEIEDTLPVEDKVNKILATIACYGSIRAGRKMRLEEM 570
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 4 VNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLL 49
V YH F + +YPF L++E+ D VDVNV P+K ++ ++KL+
Sbjct: 266 VRYAYHDFIPSDRYPFAALHLEIPYDQVDVNVHPNKSEVRFQNKKLI 312
>gi|292669798|ref|ZP_06603224.1| DNA mismatch repair protein MutL [Selenomonas noxia ATCC 43541]
gi|292648595|gb|EFF66567.1| DNA mismatch repair protein MutL [Selenomonas noxia ATCC 43541]
Length = 620
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 20/204 (9%)
Query: 162 DQLKARYARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLG 221
D A+ A T +A++R F A + PS ++A +R I+ S+ +GQ +L
Sbjct: 392 DLRTAQDAVGTERAEERSA---FAAALSPSVGQDA----DRTIEGSLLP----IGQVDLT 440
Query: 222 FIIVKYDSDLFIIDQHATDEKYNFETLQK-TTLIKSQKLVVPQNLHLTKINQCILKDNLP 280
+II + L+IIDQHA E+ F+ I SQ+++V L +++N
Sbjct: 441 YIIAQSAQTLYIIDQHAAHERILFDRFSAHADGIPSQQMLVHAILSFDAHEAQYIEENAE 500
Query: 281 VFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQ--HTNSTEHCRPSRI 338
+F + GF + + + LT P I E+L L H + H R
Sbjct: 501 LFDRLGFH--LEPAGEREYRLTEAPADIPLDEAEATIREILISLGDLHAATPAHLR---- 554
Query: 339 RAMFASRACRKSVMIGRALSVGEM 362
+A A+ ACR ++ G LS+ +M
Sbjct: 555 QAGIATMACRAAIKAGEELSIRQM 578
>gi|302380626|ref|ZP_07269091.1| DNA mismatch repair protein, C-terminal domain protein [Finegoldia
magna ACS-171-V-Col3]
gi|302311569|gb|EFK93585.1| DNA mismatch repair protein, C-terminal domain protein [Finegoldia
magna ACS-171-V-Col3]
Length = 627
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 94/387 (24%), Positives = 158/387 (40%), Gaps = 85/387 (21%)
Query: 13 NHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITD------SYAIGFT 66
N ++P L E++ VDVNV P+K++ VK+ I D + + F
Sbjct: 276 NGRFPLFWLFFEINPKLVDVNVHPNKQK------------VKISILDEILEQLNKKVRFL 323
Query: 67 VDGN----NMNQSM-EQDPSSDVDMEKIQR-SNSEEVEHETIPVPS------EDNSNFSH 114
++ N N++QS+ + D D+ + SN +++ + P+ DNS S+
Sbjct: 324 LENNVRITNISQSIPDDDKYKDLRRNYFESDSNLTNYKYDKVSEPTYSYNLFNDNSKLSN 383
Query: 115 EANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQ 174
N++ E+ E + P K + + +
Sbjct: 384 LRNIRYKDES----------EAFNKKPETN--------------------KYFFKEKDIA 413
Query: 175 AQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVK--YDSDLF 232
QD N F I+ K ES L + +EK I+ +I+ K YDS ++
Sbjct: 414 KQD----NFFLDEIEQIK---VESSLKK------YEKFDILTVLFKTYILAKDEYDSKIY 460
Query: 233 IIDQHATDEKYNFETLQKTTLIK---SQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEF 289
+ DQHA E+ N+E L K L K SQ L P N+ LT I +N +F + G+E
Sbjct: 461 LFDQHACHERINYEKLTKQMLDKEVVSQNLAFPINISLTDELMEIYTNNKSIFEELGYE- 519
Query: 290 SFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRP-SRIRAMFASRACR 348
D D +V++ ++P G + E L + T + P I + R+C+
Sbjct: 520 -SDVFSDDSVVVRAVPY----LFGNSNAEFLFTDILDTIAKNSNDPFDVIESKVIKRSCK 574
Query: 349 KSVMIGRALSVGEMTGLVRNMGRIDQP 375
SV G LS E+ L+ ++ + + P
Sbjct: 575 MSVKAGDTLSNFEIIKLLEDLFKCEYP 601
>gi|420176861|ref|ZP_14683255.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM057]
gi|420179455|ref|ZP_14685746.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM053]
gi|394251768|gb|EJD96844.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM057]
gi|394253659|gb|EJD98655.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM053]
Length = 645
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 84/381 (22%), Positives = 159/381 (41%), Gaps = 31/381 (8%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K + E YH ++P +NI+M VDVNV P K ++ + E L + I ++
Sbjct: 265 KAILEGYHTLLTIGRFPICYINIQMDPILVDVNVHPTKLEVRLSKEDQLYDLIVTKIREA 324
Query: 61 YAIGFTVDGNNMNQSMEQDPSSDV-DMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQ 119
+ + N++N++ +++ + + +KI + ET D + +H+
Sbjct: 325 FKDKILIPQNDLNRTPKKNKVLETFEQQKINFEKKQSQIGETSAPYVHDQKDKNHDVESH 384
Query: 120 QSPETVEPDTPDETIEVIDDMP-RLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDR 178
++ T +E+ EV +++ + SY QS L D+ QD Y Q+ D
Sbjct: 385 RNDLDSTSSTNNESTEVSNELHNHIDDSYLQSQKEVL-FDMEQDT-SNEYKTLNQQSND- 441
Query: 179 CVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHA 238
K +++ RV M+IVGQ + +II + ++ +F+IDQHA
Sbjct: 442 ------------IKGTVSQTPHRRV------PYMEIVGQVHGTYIIAQNENGMFMIDQHA 483
Query: 239 TDEKYNFETLQKT---TLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSD 295
E+ +E ++ + Q L++P H +K Q I+ K G
Sbjct: 484 AQERIKYEYFREKIGEVTNEVQNLLIPLTFHFSKDEQMIIDQYKDELDKVGVHLEHFGGH 543
Query: 296 DGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGR 355
D ++ S P+ E I++++ ++ S + + A+ S C+KS+
Sbjct: 544 D--YIVNSYPVWFPKVEAEEIIKDMIELVLKHKSVDVKKIREDAAIMMS--CKKSIKANH 599
Query: 356 ALSVGEMTGLVRNMGRIDQPW 376
L EM L+ + + P+
Sbjct: 600 YLKNNEMADLIDQLREAEDPF 620
>gi|313668557|ref|YP_004048841.1| DNA mismatch repair protein [Neisseria lactamica 020-06]
gi|313006019|emb|CBN87478.1| DNA mismatch repair protein [Neisseria lactamica 020-06]
Length = 658
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 93/398 (23%), Positives = 166/398 (41%), Gaps = 64/398 (16%)
Query: 1 MKLVNEVYHQ-FNNHQYPFIILNIEMSRDSVDVNVTPDKRQI-FMDHEK---LLLATVKV 55
+ V + Y +N P +L +++ ++VDVNV P K +I F D + L+ T+
Sbjct: 264 LHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSRQVHQLVFHTLNK 323
Query: 56 HITDSYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETI-----PVPSEDNS 110
+ D+ A N+ +S+ SN+ EV H+ P+PSE++S
Sbjct: 324 ALADTRA--------NLTESV---------------SNAGEVLHDITGVTPAPMPSENDS 360
Query: 111 -NFSHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYA 169
N A+ P +PDT + P + R +LSL + + YA
Sbjct: 361 ENLFDRAS--DYPTGNKPDTRNAFGSSGKTAPMPYQAARAPQQRSLSLRESRTAMNT-YA 417
Query: 170 RRTVQAQD------RCVENRFHANIDPSKNKEAESEL---NRVIKKSMFEKMKIVGQFNL 220
+ D R + RF N+ PS+ +++ + + +S + L
Sbjct: 418 ELYKKTGDIDLELSRLEQARF-GNM-PSETPAPKTDTPLSDGIPSQSELPPLGFAIAQLL 475
Query: 221 G-FIIVKYDSDLFIIDQHATDEKYNFETLQK----TTLIKSQKLVVPQNLHLTKINQCIL 275
G +I+ + + L +ID HA E+ N+E +++ ++SQ+L++P + L
Sbjct: 476 GIYILAQAEDSLLLIDMHAAAERVNYEKMKRQRRENGRLQSQRLLIPSTFAASHEECAAL 535
Query: 276 KDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDI----EELLFMLQHTNSTE 331
D+ G E S GN L + LG+ D+ ++L L S++
Sbjct: 536 ADHAETLAGFGLEL---SDMGGNTLAVR---AAPAMLGKSDVVSLARDVLGELAQVGSSQ 589
Query: 332 HCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
R + A+ +C S+ GR L++ EM L+R+M
Sbjct: 590 TIEEHENR-ILATMSCHGSIRAGRRLTLPEMNALLRDM 626
>gi|416124305|ref|ZP_11595301.1| DNA mismatch repair protein mutL [Staphylococcus epidermidis
FRI909]
gi|319401415|gb|EFV89625.1| DNA mismatch repair protein mutL [Staphylococcus epidermidis
FRI909]
Length = 645
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 84/381 (22%), Positives = 159/381 (41%), Gaps = 31/381 (8%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K + E YH ++P +NI+M VDVNV P K ++ + E L + I ++
Sbjct: 265 KAILEGYHTLLTIGRFPICYINIQMDPILVDVNVHPTKLEVRLSKEDQLYDLIVTKIREA 324
Query: 61 YAIGFTVDGNNMNQSMEQDPSSDV-DMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQ 119
+ + N++N++ +++ + + +KI + ET D + +H+
Sbjct: 325 FKDKILIPQNDLNRTPKKNKVLETFEQQKINFEKKQSQIGETSAPYVHDQKDKNHDVESH 384
Query: 120 QSPETVEPDTPDETIEVIDDMP-RLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDR 178
++ T +E+ EV +++ + SY QS L D+ QD Y Q+ D
Sbjct: 385 RNDLDSTSSTNNESTEVSNELHNHIDDSYLQSQKEVL-FDMEQDT-SNEYKTLNQQSND- 441
Query: 179 CVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHA 238
K +++ RV M+IVGQ + +II + ++ +F+IDQHA
Sbjct: 442 ------------IKGTVSQTPHRRV------PYMEIVGQVHGTYIIAQNENGMFMIDQHA 483
Query: 239 TDEKYNFETLQKT---TLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSD 295
E+ +E ++ + Q L++P H +K Q I+ K G
Sbjct: 484 AQERIKYEYFREKIGEVTNEVQNLLIPLTFHFSKDEQMIIDQYKDELDKVGVHLEHFGGH 543
Query: 296 DGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGR 355
D ++ S P+ E I++++ ++ S + + A+ S C+KS+
Sbjct: 544 D--YIVNSYPVWFPKVEAEEIIKDMIELVLKHKSVDVKKIREDAAIMMS--CKKSIKANH 599
Query: 356 ALSVGEMTGLVRNMGRIDQPW 376
L EM L+ + + P+
Sbjct: 600 YLKNNEMADLIDQLREAEDPF 620
>gi|427407123|ref|ZP_18897328.1| DNA mismatch repair protein MutL [Selenomonas sp. F0473]
gi|425707598|gb|EKU70642.1| DNA mismatch repair protein MutL [Selenomonas sp. F0473]
Length = 624
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 144/372 (38%), Gaps = 54/372 (14%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQI-FMDHEKLLLATVKVHITD 59
K V+ VY +P +L IE+ + ++DVNV P K ++ F D ++ A K
Sbjct: 268 KAVDNVYRSLVPKMGFPLAVLRIEVPQRTIDVNVHPQKTEMKFEDEGRIFKAVYKA---- 323
Query: 60 SYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQ 119
+D ++ V+ K + E + +P+ S A
Sbjct: 324 ------VLDAVRGAAGETAAIAAAVEKPKFR------CEAMPLNIPAAAPPRIS-AARPY 370
Query: 120 QSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRC 179
PET P T E + R G + L QD + +A+DR
Sbjct: 371 AVPET-RPQTVHEAVR------RAAGG--------VDLRTAQDAIG------RARAEDRV 409
Query: 180 VENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHAT 239
A D S E+ I+ + +GQ +L +I+ + L+IIDQHA
Sbjct: 410 A---LAAAEDASPYGRRENHPEGTIEGGLLP----IGQVDLTYIVAQSAQALYIIDQHAA 462
Query: 240 DEKYNFETLQ-KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGN 298
E+ F+ + I SQ+++V L +++N +F + GF + + D
Sbjct: 463 HERILFDRFSARAEGIPSQQMLVHAILSFDAREAQYIEENSELFSRLGFR--LEPAGDRE 520
Query: 299 VLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIR-AMFASRACRKSVMIGRAL 357
LT P T I E+L L ++ P+ +R A A+ ACR ++ G L
Sbjct: 521 YRLTEAPADVPTDEAEHVIREILVSLGDLHA---ATPAELRQAALATMACRAAIKAGEEL 577
Query: 358 SVGEMTGLVRNM 369
+ +M L+ +
Sbjct: 578 NFRQMEILLEEL 589
>gi|359427688|ref|ZP_09218735.1| DNA mismatch repair protein MutL [Acinetobacter sp. NBRC 100985]
gi|358236911|dbj|GAB00274.1| DNA mismatch repair protein MutL [Acinetobacter sp. NBRC 100985]
Length = 659
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 80/376 (21%), Positives = 154/376 (40%), Gaps = 55/376 (14%)
Query: 11 FNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGN 70
+ HQ+ +L +E+ +++DVNV P K +I +++ + V+ H S F
Sbjct: 290 LHGHQHSSYLLFLEVDPENIDVNVHPTKHEIRFLNQREVHEFVR-HYAKSTLSQFQTASA 348
Query: 71 NMNQSMEQDPSSDVDMEKIQRSNSEE---VEHETIPVPSEDNSNFSHEANL-----QQSP 122
++ Q+M+ D S+ + + + +E + + S N + + +L Q P
Sbjct: 349 DLAQAMKTDESTTENFDYQPQPKYQEQFNLHRAAVEAESSANQHVAVSTDLLTEFNQSRP 408
Query: 123 ETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVEN 182
+ V ++ + PR GS + + A +T A R E
Sbjct: 409 QAVNYNSGSQA-------PRYNGSAQLNN-----------------ALKTYLAPLRGRET 444
Query: 183 RFHANIDPSKNKEAESELNRVIKKSM--FEKMKIVGQFNLGFIIVKYDSDLFIIDQHATD 240
P+ E E N+ + + F + Q + +I+ + L I+D HA
Sbjct: 445 -------PTTFDHGEVESNQTVPSRVDEFPLGIAIAQLHGIYILAQNTEGLIIVDMHAAH 497
Query: 241 EKYNFETLQ----KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDD 296
E+ + ++ K SQ+L++P+ + +T++ ++D P + G E D D
Sbjct: 498 ERILLQQMKSAWDKPEFWTSQQLLIPKIVSITRMQATRIEDLQPQLQRLGLE--VDQYGD 555
Query: 297 GNVLLTSLPMSKNTTLGREDIEELL-FMLQHTNSTEHCRP--SRIRAMFASRACRKSVMI 353
V++ +P L + D E+L+ +L + + R + + A AC +V
Sbjct: 556 DQVIVRGVP----AILHKADFEKLIPELLNDLDPNDEARGLLQKRDELLAGMACHGAVRA 611
Query: 354 GRALSVGEMTGLVRNM 369
R LS+ EM L+R M
Sbjct: 612 HRQLSLSEMNALLRQM 627
>gi|156740125|ref|YP_001430254.1| DNA mismatch repair protein MutL [Roseiflexus castenholzii DSM
13941]
gi|156231453|gb|ABU56236.1| DNA mismatch repair protein MutL [Roseiflexus castenholzii DSM
13941]
Length = 605
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 80/179 (44%), Gaps = 14/179 (7%)
Query: 203 VIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETL---QKTTLIKSQKL 259
+ S ++IVGQ +I+ + +++IDQHA E+ +E L + I+ Q+L
Sbjct: 409 ITHASKLPPLRIVGQIAQSYIVAESPDGMYLIDQHAAHERITYERLMAQRGAGAIERQEL 468
Query: 260 VVPQNLHLTKINQCILKDNLPVFYKNGFEF-SFDSSDDGNVLLTSLPMSKNTTLGREDIE 318
++PQ + L Q +L D + GF F S + + ++P L D+
Sbjct: 469 LIPQVIDLPPTAQDVLLDAADRLAEWGFAVEPFGRS----LRIRAIP----AVLYPGDLA 520
Query: 319 -ELLFMLQHTNSTEHCRPSRIR-AMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQP 375
LL + H + P R A+ + +C SV G+ LS EM GLV + R P
Sbjct: 521 TALLEIADHLSGRGGTTPHDWREALLITLSCHTSVRSGQTLSFDEMRGLVLQLERCSSP 579
>gi|336462564|gb|AEI59749.1| DNA mismatch repair protein, partial [Wolbachia pipientis]
Length = 339
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 149/367 (40%), Gaps = 83/367 (22%)
Query: 7 VYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYA--I 63
YH F N++YPF +L++E+ D VDVNV P+K ++ +++L+ V+ I + + I
Sbjct: 34 AYHDFIPNNRYPFAVLHLEVPYDQVDVNVHPNKSEVRFQNKRLIYEIVRRGIIKALSMRI 93
Query: 64 GFT----VDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQ 119
G + +DG+ E+ S D+ + QR NSE V + + + +L
Sbjct: 94 GTSSVSDIDGSRCQGIGEELGGSPFDVSESQR-NSERVNNGKSREVKGQKEFYERKPSLL 152
Query: 120 QSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRC 179
++ E + PDE L GS++
Sbjct: 153 ENRLMKEFNAPDERKR------SLSGSFK------------------------------- 175
Query: 180 VENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLG---------FIIVKYDSD 230
+ I+ S ++ L R E++ ++ LG +II +
Sbjct: 176 -----YEGIEKSTPQKGVMVLER-------EQIDLIADHPLGYARCHVYNTYIIAEAKDK 223
Query: 231 LFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQC------ILKDNLPVFYK 284
L I+DQHA E+ +E L T IK QKL++P+ + + NQ + KD L ++
Sbjct: 224 LIIVDQHAAHERLIYECL---TSIKRQKLLLPETVEIK--NQAGMEMVGMYKDRL---FE 275
Query: 285 NGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFAS 344
GF +S D V + +P T +E + ++ L T ++ + A+
Sbjct: 276 MGFGIEIESED--KVRVKEIPAILGTINVKEMVMNIVDRLMEIGDTLPIE-EKVNKILAT 332
Query: 345 RACRKSV 351
AC S+
Sbjct: 333 IACHGSI 339
>gi|188586123|ref|YP_001917668.1| DNA mismatch repair protein MutL [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179350810|gb|ACB85080.1| DNA mismatch repair protein MutL [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 680
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 86/169 (50%), Gaps = 9/169 (5%)
Query: 213 KIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQ---KTTLIKSQKLVVPQNLHLTK 269
++VGQ + I++ ++++IDQHA E+ N++ L +++ +KSQ+ V+P L L
Sbjct: 494 RVVGQIFTTYWILESSDEIYLIDQHAAHERINYQLLMDRYRSSQLKSQQ-VIPYTLELDS 552
Query: 270 INQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELL-FMLQHTN 328
L+DNL + G EF F + +L+ +P + ++ I +L+ +++H +
Sbjct: 553 AGITALEDNLDKLRQCGLEFEFFGQN--TLLVRGVPFAIKDIFDQDAIYDLIDQLIKHPD 610
Query: 329 STEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPWV 377
+ + + M + AC+KS+ + E+ L++++ P+
Sbjct: 611 ND--LDITSLEEMLITIACKKSIKANEKIGAKELKSLLKSLVETPTPFT 657
>gi|301058292|ref|ZP_07199332.1| DNA mismatch repair protein, C-terminal domain protein [delta
proteobacterium NaphS2]
gi|300447626|gb|EFK11351.1| DNA mismatch repair protein, C-terminal domain protein [delta
proteobacterium NaphS2]
Length = 573
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 79/172 (45%), Gaps = 11/172 (6%)
Query: 209 FEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL---IKSQKLVVPQNL 265
F+ +I+GQ +I+ + D L ++DQHA E+ +ETLQK+ I+ Q L++P +
Sbjct: 382 FKAPEIIGQLGNMYILCQMDDGLLLVDQHAAHERIVYETLQKSLRSANIEIQNLLLPYEM 441
Query: 266 HLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQ 325
+ + +L + V + G E D LL S+P + I E + L
Sbjct: 442 EFSLKEKGVLLEKGHVLAQLGIE--LDHFGGNTFLLRSVPALLKDVNWQMLISEFISKLD 499
Query: 326 HTNSTE--HCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQP 375
E H I+ M AC ++ G+ L+ EM+ LVR + +D P
Sbjct: 500 EGVPLEGVHLTDEAIKIM----ACHGAIRAGQHLTPTEMSDLVRQLSEMDLP 547
>gi|218782320|ref|YP_002433638.1| DNA mismatch repair protein MutL [Desulfatibacillum alkenivorans
AK-01]
gi|218763704|gb|ACL06170.1| DNA mismatch repair protein MutL [Desulfatibacillum alkenivorans
AK-01]
Length = 643
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 80/168 (47%), Gaps = 8/168 (4%)
Query: 212 MKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQK---TTLIKSQKLVVPQNLHLT 268
+K +GQF ++I + L I+DQHA E+ FE +K I+ Q L++P+ L+
Sbjct: 455 LKALGQFANAYVICRSSKGLLIVDQHAAHERILFEQFKKHMEVGGIEIQNLLIPETFELS 514
Query: 269 KINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLP-MSKNTTLGREDIEELLFMLQHT 327
I IL+ LP K G + D ++ + P M N+ +G+ ++E++ +
Sbjct: 515 HIEAEILERILPDLQKTGID--VDRFSGRTFVVKAAPAMLANSDIGK-IVKEMVEKVAEA 571
Query: 328 NSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQP 375
H + + AC SV ++LS+ EM L++ + ++P
Sbjct: 572 GGNAHFFDALDECLIV-MACHGSVRAHQSLSIQEMDALLKQLEACERP 618
>gi|451945686|ref|YP_007466281.1| DNA mismatch repair protein MutL [Desulfocapsa sulfexigens DSM
10523]
gi|451905034|gb|AGF76628.1| DNA mismatch repair protein MutL [Desulfocapsa sulfexigens DSM
10523]
Length = 613
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 82/168 (48%), Gaps = 12/168 (7%)
Query: 212 MKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL---IKSQKLVVPQNLHLT 268
+KI+GQ++ +I + L +IDQHA E+ FE L+K L I Q L+ P+ + L+
Sbjct: 425 LKIIGQYDKLYIFCQSSDGLVVIDQHAAHERLLFEKLKKQFLKGNITRQTLLFPETIELS 484
Query: 269 KINQCILKDNLPVFYKNGF---EFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQ 325
++ ++ K GF EF +S +++++P N E ++L
Sbjct: 485 VVDTAKVEQYGQEIDKMGFTIREFGGNS-----YVISAVPALGNHLAPAELFFDILEQFG 539
Query: 326 HTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRID 373
+ + S + + AS AC+ ++ G ALS+ E+ L+ +M R D
Sbjct: 540 SPTGNQR-KGSLLEDVLASMACKAAIKSGDALSLKEIEALLDSMARAD 586
>gi|218283240|ref|ZP_03489301.1| hypothetical protein EUBIFOR_01889 [Eubacterium biforme DSM 3989]
gi|218215995|gb|EEC89533.1| hypothetical protein EUBIFOR_01889 [Eubacterium biforme DSM 3989]
Length = 608
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 87/174 (50%), Gaps = 11/174 (6%)
Query: 208 MFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKS---QKLVVPQN 264
F+ ++++ Q + +I+ + L I+DQHA E+Y++E L + L++ Q L+VP
Sbjct: 417 FFKHLQVLAQLHDSYILCSNEEGLVIVDQHAAQERYHYEQLNEKLLVQCTNKQPLMVPIQ 476
Query: 265 LHLTK--INQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLF 322
L ++ + Q + + F+ G EF +D ++L +P+ + ++ +++LL
Sbjct: 477 LDVSSNVLAQYMTINEKTAFF--GIEFEPFGTD--QLILREIPLWFHDVDQKQFLQDLLD 532
Query: 323 MLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+ + + M A+ AC S+ R LS+ EM ++ ++ + QP+
Sbjct: 533 YFVENQDVDMAKLR--KHMIATMACHSSIRFNRPLSMQEMEQVILDLQKCKQPY 584
>gi|418324115|ref|ZP_12935366.1| DNA mismatch repair protein [Staphylococcus pettenkoferi VCU012]
gi|365227612|gb|EHM68804.1| DNA mismatch repair protein [Staphylococcus pettenkoferi VCU012]
Length = 652
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 91/396 (22%), Positives = 174/396 (43%), Gaps = 54/396 (13%)
Query: 2 KLVNEVYHQFNN-HQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K + E YH +YP LNI+M VDVNV P K ++ + E+ L + + I ++
Sbjct: 265 KAIFEGYHTLMMIGRYPICYLNIQMDPILVDVNVHPTKLEVRLSKEEQLYSLIVEKIREA 324
Query: 61 YAIGFTVDGNNM------NQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSH 114
+ + N+M N+ + Q +D E+ Q+ V ED ++ S
Sbjct: 325 FKDRILIPQNDMSKFEKKNKVLHQFEQQKIDFERKQK------------VSDEDQTSDST 372
Query: 115 EANLQQSPETVEPDTPDETIEVIDDMPRLQ----GSYRQSTPVTLSLDIIQDQLKARYAR 170
N ++ E E ++ + D P Q GS Q + + + D A+
Sbjct: 373 SHNEAETEEAQE--NSNDELSSRHDAPAYQTTSDGSESQVSEKSSTDDYAM-------AQ 423
Query: 171 RTVQAQDRCVENRFHANIDPSKNKEAESE-LNRVIKKSMFEK---MKIVGQFNLGFIIVK 226
R V ++ +EN A + S+N E +++ + ++ K+ + +++VGQ + +II +
Sbjct: 424 REVLSE---LENSDVA--ESSENLEEDTDNIKGIVSKTPSRRVPYVEVVGQVHGTYIIAQ 478
Query: 227 YDSDLFIIDQHATDEKYNFETLQKT---TLIKSQKLVVPQNLHLTKINQCILKDNLPVFY 283
++ +F+IDQHA E+ +E + + Q L++P H +K + I++
Sbjct: 479 NENGMFMIDQHAAQERIKYEYFRDKIGEVTNEVQDLLIPLTFHFSKDDVMIIEQYKDELE 538
Query: 284 KNGFEFS-FDSSDDGNVLLTSLPMSKNTTLGREDIEELL-FMLQHTNSTEHCRPSRIRAM 341
K G F D ++ S P+ E I++++ ++L+H + ++IR
Sbjct: 539 KVGVHLEPFGGHD---YIVNSYPVWFPQQEAEEIIKDMIEYVLEH----QKVDVNKIREE 591
Query: 342 FA-SRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
A +C+KS+ L EM L+ + + P+
Sbjct: 592 AAIMMSCKKSIKANHYLKNSEMADLIDQLREAEDPF 627
>gi|268682221|ref|ZP_06149083.1| DNA mismatch repair protein [Neisseria gonorrhoeae PID332]
gi|268622505|gb|EEZ54905.1| DNA mismatch repair protein [Neisseria gonorrhoeae PID332]
Length = 654
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 97/400 (24%), Positives = 161/400 (40%), Gaps = 72/400 (18%)
Query: 1 MKLVNEVYHQ-FNNHQYPFIILNIEMSRDSVDVNVTPDKRQI-FMDH---EKLLLATVKV 55
+ V + Y +N P +L +E+ ++VDVNV P K +I F D +L+ T+
Sbjct: 264 LHAVKQAYRDVLHNALTPAFVLFLELPPEAVDVNVHPTKTEIRFRDSRQVHQLVFHTLNK 323
Query: 56 HITDSYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETI-----PVPSEDNS 110
+ D+ A N+ +S+ SN+ EV H+ P+PSE++S
Sbjct: 324 ALADTRA--------NLTESV---------------SNAGEVLHDITGVTPAPMPSENDS 360
Query: 111 N--FSHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARY 168
F +N P +PDT + P + R +LSL + + Y
Sbjct: 361 ENLFDSASN---HPTGNKPDTRNAFGSSGKTAPMPYQAARAPQQHSLSLRESRAAMDT-Y 416
Query: 169 ARRTVQAQDRCVE------NRFHANIDPSKNKEAESELNRVI----KKSMFEKMKIVGQF 218
A + D +E RF N +ES N V + S +
Sbjct: 417 AELYKKTDDIDLELSQFEQARF-------GNMPSESSTNNVSDGIGQASELPPLGFAIAQ 469
Query: 219 NLG-FIIVKYDSDLFIIDQHATDEKYNFETL----QKTTLIKSQKLVVPQNLHLTKINQC 273
LG +I+ + + L +ID HA E+ N+E + Q+ ++SQ L++P +
Sbjct: 470 LLGIYILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGNLQSQHLLIPVTFAASHEECA 529
Query: 274 ILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDI----EELLFMLQHTNS 329
L D+ G E S GN L + LG+ D+ ++L L S
Sbjct: 530 ALADHAETLAGFGLEL---SDMGGNTLAVR---AAPVMLGKSDVVSLARDVLGELAQVGS 583
Query: 330 TEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
++ R + A+ +C S+ GR L++ EM L+R+M
Sbjct: 584 SQTIASHENR-ILATMSCHGSIRAGRRLTLPEMNALLRDM 622
>gi|294793675|ref|ZP_06758812.1| DNA mismatch repair protein MutL [Veillonella sp. 3_1_44]
gi|294455245|gb|EFG23617.1| DNA mismatch repair protein MutL [Veillonella sp. 3_1_44]
Length = 681
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 91/190 (47%), Gaps = 17/190 (8%)
Query: 192 KNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKT 251
+N+E E +R I+ S F M GQ +I+ K DL+IIDQHA E+ ++ L K+
Sbjct: 482 RNEEIE---DRTIQNSGFLPM---GQVASCYILAKKGDDLYIIDQHAAHERVRYDKLCKS 535
Query: 252 T-LIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNT 310
+ I Q ++VPQ T ++++ GF+ + L P+
Sbjct: 536 SESIPMQSILVPQYSEATDDEMNLVEEERETLLDLGFDVELGGPT--KIKLVGAPVDLVE 593
Query: 311 TLGREDIEELLFMLQHTNSTEHCRPSRIR---AMFASRACRKSVMIGRALSVGEMTGLVR 367
+ E I + +F H +H +P++ + M A +CR ++ G L++ +MT L+
Sbjct: 594 SKAFE-ILQYIFSYLH----DHQQPTKAQLRHEMLAYASCRGAIKAGHNLNMYQMTTLIE 648
Query: 368 NMGRIDQPWV 377
++ ++P+V
Sbjct: 649 DLFSTEKPYV 658
>gi|418630414|ref|ZP_13192896.1| DNA mismatch repair protein [Staphylococcus epidermidis VCU128]
gi|374837955|gb|EHS01513.1| DNA mismatch repair protein [Staphylococcus epidermidis VCU128]
Length = 645
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 84/381 (22%), Positives = 160/381 (41%), Gaps = 31/381 (8%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K + E YH ++P +NI+M VDVNV P K ++ + E L + I ++
Sbjct: 265 KAILEGYHTLLTIGRFPICYINIQMDPILVDVNVHPTKLEVRLSKEDQLYDLIVTKIREA 324
Query: 61 YAIGFTVDGNNMNQSMEQDPSSDV-DMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQ 119
+ + N++N++ +++ + + +KI + ET D + +H+
Sbjct: 325 FKDKILIPQNDLNRTPKKNKVLETFEQQKINFEKKQSQIGETSAPYVHDQKDKNHDVESH 384
Query: 120 QSPETVEPDTPDETIEVIDDMP-RLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDR 178
++ T +E+ EV +++ + SY QS L D+ QD Y Q++D
Sbjct: 385 RNNLDSTSSTNNESTEVSNELNNHIDDSYLQSQKEVL-FDMEQDT-SNEYEILNQQSKD- 441
Query: 179 CVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHA 238
K +++ RV M+IVGQ + +II + ++ +F+IDQHA
Sbjct: 442 ------------IKGTVSQTPHRRV------PYMEIVGQVHGTYIIAQNENGMFMIDQHA 483
Query: 239 TDEKYNFETLQKT---TLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSD 295
E+ +E ++ + Q L++P H +K Q I+ K G
Sbjct: 484 AQERIKYEYFREKIGEVTNEVQNLLIPLTFHFSKDEQMIIDQYKDELDKVGVHLEHFGGH 543
Query: 296 DGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGR 355
D ++ S P+ E I++++ ++ S + + A+ S C+KS+
Sbjct: 544 D--YIVNSYPVWFPKVEAEEIIKDMIELVLKHKSVDVKKIREDAAIMMS--CKKSIKANH 599
Query: 356 ALSVGEMTGLVRNMGRIDQPW 376
L EM L+ + + P+
Sbjct: 600 YLKNNEMADLIDQLREAEDPF 620
>gi|418615565|ref|ZP_13178507.1| DNA mismatch repair protein [Staphylococcus epidermidis VCU118]
gi|374817004|gb|EHR81195.1| DNA mismatch repair protein [Staphylococcus epidermidis VCU118]
Length = 645
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 84/381 (22%), Positives = 160/381 (41%), Gaps = 31/381 (8%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K + E YH ++P +NI+M VDVNV P K ++ + E L + I ++
Sbjct: 265 KAILEGYHTLLTIGRFPICYINIQMDPILVDVNVHPTKLEVRLSKEDQLYDLIVTKIREA 324
Query: 61 YAIGFTVDGNNMNQSMEQDPSSDV-DMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQ 119
+ + N++N++ +++ + + +KI + ET D + +H+
Sbjct: 325 FKDKILIPQNDLNRTPKKNKVLETFEQQKINFEKKQSQIGETSAPYVHDQKDKNHDVESH 384
Query: 120 QSPETVEPDTPDETIEVIDDMP-RLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDR 178
++ T +E+ EV +++ + SY QS L D+ QD Y Q++D
Sbjct: 385 RNNLDSTSSTNNESTEVSNELNNHIDDSYLQSQKEVL-FDMEQDT-SNEYEILNQQSKD- 441
Query: 179 CVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHA 238
K +++ RV M+IVGQ + +II + ++ +F+IDQHA
Sbjct: 442 ------------IKGTVSQTPHRRV------PYMEIVGQVHGTYIIAQNENGMFMIDQHA 483
Query: 239 TDEKYNFETLQKT---TLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSD 295
E+ +E ++ + Q L++P H +K Q I+ K G
Sbjct: 484 AQERIKYEYFREKIGEVTNEVQNLLIPLTFHFSKDEQMIIDQYKDELDKVGVHLEHFGGH 543
Query: 296 DGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGR 355
D ++ S P+ E I++++ ++ S + + A+ S C+KS+
Sbjct: 544 D--YIVNSYPVWFPKVEAEEIIKDMIELVLKHKSVDVKKIREDAAIMMS--CKKSIKANH 599
Query: 356 ALSVGEMTGLVRNMGRIDQPW 376
L EM L+ + + P+
Sbjct: 600 YLKNNEMADLIDQLREAEDPF 620
>gi|291459238|ref|ZP_06598628.1| DNA mismatch repair protein MutL [Oribacterium sp. oral taxon 078
str. F0262]
gi|291418492|gb|EFE92211.1| DNA mismatch repair protein MutL [Oribacterium sp. oral taxon 078
str. F0262]
Length = 675
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 85/179 (47%), Gaps = 7/179 (3%)
Query: 202 RVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIK---SQK 258
R + + + +I+GQ + +++Y LF+IDQHA EK NFE L K K SQ
Sbjct: 477 RFLSEKARTEQRIIGQLFDTYWLIEYGDKLFLIDQHAAHEKVNFERLMKRFREKKALSQY 536
Query: 259 LVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIE 318
L P L L+ + IL+ L F + G+E S D +V +++P + +G++++
Sbjct: 537 LSPPIVLTLSSREELILQRYLSYFRELGYEISELGGRDYSV--SAVP-ADLPRIGKKELL 593
Query: 319 ELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPWV 377
L S H S I AS +C+ +V LS EM L+ + ++ P+
Sbjct: 594 LELLDELCEESGRHTAES-IYDRIASMSCKAAVKGNMRLSFREMDALLSELMSLENPYA 651
>gi|353328357|ref|ZP_08970684.1| DNA mismatch repair protein [Wolbachia endosymbiont wVitB of
Nasonia vitripennis]
Length = 609
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 12/153 (7%)
Query: 222 FIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPV 281
+II + L I+DQHA E+ +E L++ + IK QKL++P+ + +I + + V
Sbjct: 433 YIIAEVRDKLIIVDQHAAHERLVYECLKEKSSIKRQKLLLPE---MVEIKSQAGMEMIEV 489
Query: 282 FYKNGFEFSFD--SSDDGNVLLTSLPMSKNTTLGREDIEELLF-MLQHTNSTEHCRP--S 336
+ FE FD + +++ +P LG D++E+L ++ E P
Sbjct: 490 YKNKLFEMGFDIEIKSENAIIVKEIP----AILGSIDVKEMLIDIVDRLIEIEDTLPIED 545
Query: 337 RIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
+I + A+ AC S+ GR + + EM L+R +
Sbjct: 546 KINKILATIACHGSIRAGRKMKLEEMNELLRQI 578
>gi|418634044|ref|ZP_13196442.1| DNA mismatch repair protein [Staphylococcus epidermidis VCU129]
gi|420189480|ref|ZP_14695454.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM037]
gi|420204219|ref|ZP_14709779.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM015]
gi|374838036|gb|EHS01593.1| DNA mismatch repair protein [Staphylococcus epidermidis VCU129]
gi|394262030|gb|EJE06815.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM037]
gi|394274233|gb|EJE18658.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM015]
Length = 645
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 84/381 (22%), Positives = 160/381 (41%), Gaps = 31/381 (8%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K + E YH ++P +NI+M VDVNV P K ++ + E L + I ++
Sbjct: 265 KAILEGYHTLLTIGRFPICYINIQMDPILVDVNVHPTKLEVRLSKEDQLYDLIVTKIREA 324
Query: 61 YAIGFTVDGNNMNQSMEQDPSSDV-DMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQ 119
+ + N++N++ +++ + + +KI + ET D + +H+
Sbjct: 325 FKDKILIPQNDLNRTPKKNKVLETFEQQKINFEKKQSQIGETSAPYVHDQKDKNHDVESH 384
Query: 120 QSPETVEPDTPDETIEVIDDMP-RLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDR 178
++ T +E+ EV +++ + SY QS L D+ QD Y Q++D
Sbjct: 385 RNNLDSTSSTNNESTEVSNELNNHIDDSYLQSQKEVL-FDMEQDT-SNEYEILNQQSKD- 441
Query: 179 CVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHA 238
K +++ RV M+IVGQ + +II + ++ +F+IDQHA
Sbjct: 442 ------------IKGTVSQTPHRRV------PYMEIVGQVHGTYIIAQNENGMFMIDQHA 483
Query: 239 TDEKYNFETLQKT---TLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSD 295
E+ +E ++ + Q L++P H +K Q I+ K G
Sbjct: 484 AQERIKYEYFREKIGEVTNEVQNLLIPLTFHFSKDEQMIIDQYKDELDKVGVHLEHFGGH 543
Query: 296 DGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGR 355
D ++ S P+ E I++++ ++ S + + A+ S C+KS+
Sbjct: 544 D--YIVNSYPVWFPKVEAEEIIKDMIELVLKHKSVDVKKIREDAAIMMS--CKKSIKANH 599
Query: 356 ALSVGEMTGLVRNMGRIDQPW 376
L EM L+ + + P+
Sbjct: 600 YLKNNEMADLIDQLREAEDPF 620
>gi|357033035|ref|ZP_09094967.1| DNA mismatch repair protein MutL [Gluconobacter morbifer G707]
gi|356413395|gb|EHH67050.1| DNA mismatch repair protein MutL [Gluconobacter morbifer G707]
Length = 625
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 25/169 (14%)
Query: 218 FNLGFIIVKYDSDLFIIDQHATDEKYNFETLQ---KTTLIKSQKLVVPQNLHLTKINQCI 274
F+ I V D DL ++DQHA E+ E L+ + ++SQ L++P+ + L +
Sbjct: 437 FDTYIIAVAPDGDLVLVDQHAAHERLTHERLRAQYASGHLRSQALLLPEVVDLPRREAEA 496
Query: 275 LKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELL------------F 322
L K G E +S G+VLL S+P LG +D++ LL
Sbjct: 497 LLACTEDLSKLGIE--LESFGPGSVLLRSVP----ALLGTKDVQGLLRDIADELADDPAL 550
Query: 323 MLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGR 371
T+S H R+ A+ A AC S+ GR L EM L+R M R
Sbjct: 551 DAGSTDSFSH----RLDAVIARMACHGSIRAGRRLKPEEMDALLREMER 595
>gi|296532255|ref|ZP_06894999.1| DNA mismatch repair protein MutL, partial [Roseomonas cervicalis
ATCC 49957]
gi|296267425|gb|EFH13306.1| DNA mismatch repair protein MutL [Roseomonas cervicalis ATCC 49957]
Length = 215
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 82/189 (43%), Gaps = 32/189 (16%)
Query: 213 KIVGQFNLGFIIVKY-DSDLFIIDQHATDEKYNFETLQKTTL---IKSQKLVVPQNLHLT 268
+ V Q +I+ + D L ++DQHA E+ E L+ L +++Q L++P + L
Sbjct: 27 RPVAQLLETYILAEAPDGALVLVDQHAAHERLTHEQLKAQLLDGEVRAQPLLIPAVVELP 86
Query: 269 KINQCILKDNLPVFYKNGFEFS-FDSSDDGNVLLTSLPMSKNTTLGREDIEELLF----- 322
+ L + P + G E F ++ +L+ SLP LG D LL
Sbjct: 87 PADAARLLEAAPTLARLGLEIEDFGAA---TLLVRSLP----ALLGNPDPAPLLRDLCAE 139
Query: 323 MLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM-----------GR 371
+ + ST R R+ A A AC S+ GR L+ EM+ L+R M GR
Sbjct: 140 LAEWEESTALER--RLDAAIARLACHGSIRAGRRLNPAEMSALLRQMEATPRASTCSHGR 197
Query: 372 IDQPWVSMG 380
W+ MG
Sbjct: 198 PT--WLRMG 204
>gi|421568015|ref|ZP_16013746.1| DNA mismatch repair protein mutL [Neisseria meningitidis NM3001]
gi|402342960|gb|EJU78116.1| DNA mismatch repair protein mutL [Neisseria meningitidis NM3001]
Length = 658
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 93/398 (23%), Positives = 166/398 (41%), Gaps = 64/398 (16%)
Query: 1 MKLVNEVYHQ-FNNHQYPFIILNIEMSRDSVDVNVTPDKRQI-FMDHEK---LLLATVKV 55
+ V + Y +N P +L +++ ++VDVNV P K +I F D ++ L+ T+
Sbjct: 264 LHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSQQVHQLVFHTLNK 323
Query: 56 HITDSYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETI-----PVPSEDNS 110
+ D+ A ++ +S+ N+ EV H+ P+PSE+NS
Sbjct: 324 ALADTRA--------DLTESV---------------GNAGEVLHDITGVTPAPMPSENNS 360
Query: 111 N--FSHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARY 168
F +N P +PDT + P + R +LSL + + Y
Sbjct: 361 ENLFDRASNY---PTGNKPDTRNAFGASGKTAPMPYQAARAPQQRSLSLRESRAAMNT-Y 416
Query: 169 ARRTVQAQD------RCVENRFHANIDPSKNKEAESELNRVI-KKSMFEKMKIVGQFNLG 221
A + D R + RF + + ++ L+ I +S + LG
Sbjct: 417 AELYKKTDDIDLELNRLEQARFGNMPSETPTPKTDAPLSDGIPSQSELPPLGFAIAQLLG 476
Query: 222 -FIIVKYDSDLFIIDQHATDEKYNFETL----QKTTLIKSQKLVVPQNLHLTKINQCILK 276
+I+ + + L +ID HA E+ N+E + Q+ ++SQ+L++P + L
Sbjct: 477 IYILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGNLQSQRLLIPVTFAASHEECAALA 536
Query: 277 DNLPVFYKNGFEFSFDSSDDGNVL-LTSLPMSKNTTLGREDI----EELLFMLQHTNSTE 331
D G E S GN L + ++P LG+ D+ +++L L S++
Sbjct: 537 DYAETLAGFGLEL---SDMGGNTLAVRAVP----AMLGKADVVSLAKDVLNELAQVGSSQ 589
Query: 332 HCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
R + A+ +C S+ GR L++ EM L+R+M
Sbjct: 590 TIEEHENR-ILATMSCHGSIRAGRRLTLPEMNALLRDM 626
>gi|134299735|ref|YP_001113231.1| DNA mismatch repair protein [Desulfotomaculum reducens MI-1]
gi|172044301|sp|A4J5Q3.1|MUTL_DESRM RecName: Full=DNA mismatch repair protein MutL
gi|134052435|gb|ABO50406.1| DNA mismatch repair protein MutL [Desulfotomaculum reducens MI-1]
Length = 640
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 148/369 (40%), Gaps = 38/369 (10%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMNQ 74
++P IL+I++ VDVNV P K +I M E + + ++DS + + G
Sbjct: 280 RFPIAILHIDIDPTQVDVNVHPTKMEIRMAREGEIQEELLAALSDSLNVPTAITG----- 334
Query: 75 SMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQ----QSPETVEPDTP 130
E P + QR+ + EV+ + S E LQ Q P V D P
Sbjct: 335 LWEIMPGRTKNTATDQRAENLEVKPD------------SKEKELQPKESQHPRLVACDLP 382
Query: 131 DETI-EVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANID 189
I D +L S R+ PV ++ D+ + R + E + N
Sbjct: 383 SGKIMPPRHDQEQLHFSSRRIAPVRGKNSLLPDE-GSSINREEIPPVVDVKEQQLKEN-- 439
Query: 190 PSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQ 249
P+ + AE+ F + GQ +++ + L+IIDQHA E+ +E
Sbjct: 440 PNTYQPAET--------LGFPVLVPAGQVPPTYVLAHGEGGLYIIDQHAAHERVLYEKYL 491
Query: 250 K--TTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMS 307
+++Q L+ P L + ++ ++ F + GF D LL +P +
Sbjct: 492 YLLGNYVEAQMLLEPLTLEIPHHEAQLIIKHIVDFNELGFILEHFGGD--TFLLRGVP-T 548
Query: 308 KNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVR 367
T +E +LL LQ S + + + + A+ ACR +V G+ S E L+
Sbjct: 549 NAITEPKEVFLDLLARLQENPSQKVEKNLVLDHLAAAMACRDAVKSGQHFSAVETKALLD 608
Query: 368 NMGRIDQPW 376
+ R +P+
Sbjct: 609 GLARCQKPY 617
>gi|448723194|ref|ZP_21705719.1| DNA mismatch repair protein MutL [Halococcus hamelinensis 100A6]
gi|445788149|gb|EMA38871.1| DNA mismatch repair protein MutL [Halococcus hamelinensis 100A6]
Length = 552
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 78/185 (42%), Gaps = 20/185 (10%)
Query: 205 KKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTT------------ 252
+ S FE + ++GQF +++ + D DL ++DQHA E+ N+E L+
Sbjct: 349 EGSAFESIAVIGQFRELYLLCEADDDLLVVDQHAAHERINYERLRAAVGDGGSNDGTGQG 408
Query: 253 LIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTL 312
++S + P+ L LT + + + GF F D + ++ +T +P
Sbjct: 409 GVESAD-IEPRRLPLTASEAALAETHRGDLAAIGFRFETDRA---SLRVTGVPAPLGRVA 464
Query: 313 GREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRI 372
E + + L L R ++ AC S+ G AL+ T LVR +G
Sbjct: 465 SPEALRDALDTLAAGEEPTDPRDELLKEF----ACHPSLKAGDALTTEAATRLVRRLGAC 520
Query: 373 DQPWV 377
+Q +
Sbjct: 521 EQAFA 525
>gi|448300084|ref|ZP_21490088.1| DNA mismatch repair protein MutL [Natronorubrum tibetense GA33]
gi|445586431|gb|ELY40711.1| DNA mismatch repair protein MutL [Natronorubrum tibetense GA33]
Length = 740
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 76/170 (44%), Gaps = 6/170 (3%)
Query: 212 MKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL--IKSQKLVVPQNLHLTK 269
++++GQ + +++ + + L +IDQHA DE+ N+E LQ+ +Q L P L LT
Sbjct: 544 LRVLGQLDDTYLVCETEDGLALIDQHAADERVNYERLQRAFADDPAAQALASPVELELTA 603
Query: 270 INQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELL--FMLQHT 327
+ + + G F D +DD V +T++P TL E + ++L F+
Sbjct: 604 VEAEAFESYREALSRLG--FYADRTDDRTVAVTTVPAVLEETLEPERVRDVLASFLEGDR 661
Query: 328 NSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPWV 377
S + AC S+ +L+ G + L+ + + P+
Sbjct: 662 ESGAETIDALADEFLGDLACYPSITGNTSLTEGSVVDLLAALDDCENPYA 711
Score = 41.2 bits (95), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 10 QFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMD 44
Q +YPF+ L +E+ D+VDVNV P KR++ D
Sbjct: 292 QLGGDRYPFVTLFLEVPGDAVDVNVHPRKREVRFD 326
>gi|169824441|ref|YP_001692052.1| DNA mismatch repair protein [Finegoldia magna ATCC 29328]
gi|167831246|dbj|BAG08162.1| DNA mismatch repair protein [Finegoldia magna ATCC 29328]
Length = 627
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 82/173 (47%), Gaps = 12/173 (6%)
Query: 209 FEKMKIVGQFNLGFIIVK--YDSDLFIIDQHATDEKYNFETLQKTTLIK---SQKLVVPQ 263
+EK I+ +I+ K YDS +++ DQHA E+ N+E L K L K SQ L P
Sbjct: 435 YEKFDILTVLFKTYILAKDEYDSKIYLFDQHACHERINYEKLTKQMLDKEVVSQNLAFPI 494
Query: 264 NLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFM 323
N+ LT I +N +F + G+E D D +V++ ++P G + E L
Sbjct: 495 NISLTDELMEIYTNNKSIFEELGYE--SDVFSDDSVVVRAVPY----LFGNSNAEFLFTD 548
Query: 324 LQHTNSTEHCRP-SRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQP 375
+ T + P I + R+C+ SV G LS E+ L+ ++ + + P
Sbjct: 549 ILDTIAKNSNDPFDVIESKVIKRSCKMSVKAGDTLSNFEIIKLLEDLFKCEYP 601
>gi|449124137|ref|ZP_21760456.1| DNA mismatch repair protein MutL [Treponema denticola OTK]
gi|448942468|gb|EMB23362.1| DNA mismatch repair protein MutL [Treponema denticola OTK]
Length = 613
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 142/337 (42%), Gaps = 57/337 (16%)
Query: 11 FNNHQYP--FIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVD 68
F N +P F+ LNI+ R VD N+ P KR+ + K + ++ I+ Y D
Sbjct: 274 FPNGGFPSAFVFLNIDPER--VDFNIHPAKREAKFEDYKEIHHSLSSTISSFYKQKTVSD 331
Query: 69 GNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPD 128
+ +S + + + D EK + + ++ P +++ + LQ S +T P
Sbjct: 332 --LLKESYQPEYTRGFDFEKTEY-EAADLNQSYNPAGTKNYRQSNTFEYLQNSTKTYWPS 388
Query: 129 TPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANI 188
+P + IE ++++ + Q +L A + QD
Sbjct: 389 SPIKQIEA-------STAFQEISQADYGASAAQHRLSAAAYETSAVPQD----------- 430
Query: 189 DPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETL 248
+ KS F K +GQF FI V+ ++ L+IIDQHA E+ FE L
Sbjct: 431 ---------------LPKSDF---KFLGQFCGTFIAVEKNNALYIIDQHAAHERILFEGL 472
Query: 249 QKTTLIKSQKLVVPQNLHL-TKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMS 307
+K +L SQ+L++P + ++ + I++ NL K GF S G ++ ++P+
Sbjct: 473 KK-SLGPSQELLIPYRIETESEKDDEIIRLNLQELQKAGFNIS--EEKKGLWIIRAVPIR 529
Query: 308 KNTTLGREDIEELLF--------MLQHTNSTEHCRPS 336
T +D++E L ++ H + CR +
Sbjct: 530 WQGT--EKDLKEDLAGSGKDPSGLMHHILARSACRAA 564
>gi|416999163|ref|ZP_11939832.1| DNA mismatch repair protein, C-terminal domain protein [Veillonella
parvula ACS-068-V-Sch12]
gi|333977316|gb|EGL78175.1| DNA mismatch repair protein, C-terminal domain protein [Veillonella
parvula ACS-068-V-Sch12]
Length = 687
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 90/190 (47%), Gaps = 17/190 (8%)
Query: 192 KNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKT 251
+N+E E R I+ S F M GQ +I+ K DL+IIDQHA E+ ++ L K+
Sbjct: 488 RNEEIE---ERTIQNSGFLPM---GQVASCYILAKKGDDLYIIDQHAAHERVRYDKLCKS 541
Query: 252 T-LIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNT 310
+ I Q ++VPQ T ++++ GF+ + L P+
Sbjct: 542 SESIPMQSILVPQYSEATNDEMNLVEEERETLLDLGFDVELGGPT--KIKLVGAPVDLVE 599
Query: 311 TLGREDIEELLFMLQHTNSTEHCRPSRIR---AMFASRACRKSVMIGRALSVGEMTGLVR 367
+ E I + +F H +H +P++ + M A +CR ++ G L++ +MT L+
Sbjct: 600 SKAFE-ILQYIFSYLH----DHQQPTKAQLRHEMLAYASCRGAIKAGHNLNMYQMTTLIE 654
Query: 368 NMGRIDQPWV 377
++ ++P+V
Sbjct: 655 DLFSTEKPYV 664
>gi|406904291|gb|EKD46121.1| hypothetical protein ACD_69C00004G0002 [uncultured bacterium]
Length = 605
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 79/165 (47%), Gaps = 12/165 (7%)
Query: 215 VGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKT---TLIKSQKLVVPQNLHLTKIN 271
+ Q + +I+ + L ++D HA E+ N+E L+ T LI Q L+VP L L
Sbjct: 419 LAQLHGVYILAQNQDGLILVDAHAAHERINYEQLKSTYGAELIPMQTLLVPIALTLNNSE 478
Query: 272 QCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTE 331
++ N + K GFE + S + N+L+ +P+ L D+++L+ + T
Sbjct: 479 INCVESNFELLRKFGFEITRSSPE--NILVRCVPV----LLQDADVDQLIHDVIADLLTH 532
Query: 332 HCRPSRIR---AMFASRACRKSVMIGRALSVGEMTGLVRNMGRID 373
C S + + A+ AC SV R LS+ EM L+R + + D
Sbjct: 533 DCVDSIVENSNKILATIACHSSVRAKRKLSIDEMNALLRKLEQTD 577
>gi|448593354|ref|ZP_21652352.1| DNA mismatch repair protein MutL [Haloferax elongans ATCC BAA-1513]
gi|445730262|gb|ELZ81852.1| DNA mismatch repair protein MutL [Haloferax elongans ATCC BAA-1513]
Length = 550
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 87/184 (47%), Gaps = 12/184 (6%)
Query: 197 ESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKT---TL 253
+S L+ V +S+F+ ++++GQF +++ + +L +IDQHA E+ N+E L++
Sbjct: 346 DSSLSPVEAESVFDDVRVIGQFRDLYVLCEVGDELLVIDQHAAHERVNYERLREAVEKAG 405
Query: 254 IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFS-FDSSDDGNVLLTSLPMSKNTTL 312
+ S + P ++ L+ +L+ N + GF + F G + ++P
Sbjct: 406 VDSVPVDPPVSVSLSPPEAALLEANRDAVERLGFRVADFGG---GTYRVEAVPAPLGRPF 462
Query: 313 GREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRI 372
+ + +++ L N R ++ + AC S+ G LSV + T LV +G
Sbjct: 463 APDALADVVSDLA-ANDPRDPRDEFLKDL----ACHPSIKAGDDLSVADATRLVSRLGSC 517
Query: 373 DQPW 376
+ P+
Sbjct: 518 EAPY 521
>gi|433524468|ref|ZP_20481126.1| DNA mismatch repair protein mutL [Neisseria meningitidis 97020]
gi|432258695|gb|ELL13976.1| DNA mismatch repair protein mutL [Neisseria meningitidis 97020]
Length = 660
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 171/399 (42%), Gaps = 66/399 (16%)
Query: 1 MKLVNEVYHQ-FNNHQYPFIILNIEMSRDSVDVNVTPDKRQI-FMDHEK---LLLATVKV 55
+ V + Y +N P +L +++ ++VDVNV P K +I F D ++ L+ T+
Sbjct: 266 LHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSQQVHQLVFHTLNK 325
Query: 56 HITDSYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHE-----TIPVPSEDNS 110
+ D+ A N+ +S+ N+ EV H+ + P+PSE++S
Sbjct: 326 ALADTRA--------NLTESV---------------GNAGEVLHDITGVVSTPMPSENDS 362
Query: 111 -NFSHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYA 169
N A+ P +PDT + P + R +LSL + + YA
Sbjct: 363 ENLFDSAS--DYPTGNKPDTRNAFGSSGKTAPMPYQAARAPQQHSLSLRESRAAMNT-YA 419
Query: 170 RRTVQAQD------RCVENRFHANIDPSKNKEAESEL---NRVIKKSMFEKMKIVGQFNL 220
+ D R + RF N+ PS+ +++ + + +S + L
Sbjct: 420 ELYKKTDDIDLELNRLEQARF-GNM-PSETPIPKTDTPLSDGLPSQSELPPLGFAIAQLL 477
Query: 221 G-FIIVKYDSDLFIIDQHATDEKYNFETLQK----TTLIKSQKLVVPQNLHLTKINQCIL 275
G +I+ + + L +ID HA E+ N+E +++ ++SQ+L++P + L
Sbjct: 478 GIYILAQAEDSLLLIDMHAAAERVNYEKMKRQRRENGKLQSQRLLIPSTFAASHEECAAL 537
Query: 276 KDNLPVFYKNGFEFSFDSSDDGNVL-LTSLPMSKNTTLGREDI----EELLFMLQHTNST 330
D+ G E S GN L + ++P LG+ D+ +++L L S+
Sbjct: 538 ADHAEALAGFGLEL---SDMGGNTLAVRTVP----AMLGKADVVSLAKDVLGELAQVGSS 590
Query: 331 EHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
+ R + A+ +C SV GR L++ EM L+R+M
Sbjct: 591 QTIEEHENR-ILATMSCHGSVRAGRRLTLPEMNALLRDM 628
>gi|448349092|ref|ZP_21537936.1| DNA mismatch repair protein MutL [Natrialba taiwanensis DSM 12281]
gi|445641432|gb|ELY94511.1| DNA mismatch repair protein MutL [Natrialba taiwanensis DSM 12281]
Length = 735
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 86/423 (20%), Positives = 154/423 (36%), Gaps = 63/423 (14%)
Query: 10 QFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDG 69
Q + +YPF++L + ++VDVNV P KR++ D + + V DS G +D
Sbjct: 292 QLGSDRYPFVVLFHDAPGEAVDVNVHPRKREVRFDDDDAVRRQV-----DSAVEGALLD- 345
Query: 70 NNMNQS-----------------------------MEQDPSSDVD-----MEKIQRSNSE 95
N + +S E +PSS D E S ++
Sbjct: 346 NGLLRSRAPRGRSAPSEARVTPDRQKPEREKGGPETESNPSSASDDSATGSESGGASAAD 405
Query: 96 EVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPD-ETIEVIDDMPRLQGSY-----RQ 149
+ E+ T P+ ++ + + E E ++ D + D R G
Sbjct: 406 DTENRTEATPTGAATDDIERGGFESAAERREAESTDVREVADTDSADRAAGQKPGRVPND 465
Query: 150 STPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKK--- 206
+P T + + + D +DP + +A +E +
Sbjct: 466 GSPTTSTAAGVSSDTDTDTNTDPDSSADAVDAAHGRRALDPERKFDAATEQRTLAGDAAT 525
Query: 207 --------SMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL--IKS 256
S ++++GQ++ +++ + D L +IDQHA DE+ N+E LQ +
Sbjct: 526 GAGGDHEFSSLPPLRVLGQYSDTYLVCETDDGLVLIDQHAADERVNYERLQAAVAEDPSA 585
Query: 257 QKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGRED 316
Q L P L LT + G F D DD V +T++P TL +
Sbjct: 586 QALASPVELELTAAEAEAFAAYRDALAQLG--FYADRVDDRTVAVTTVPAVFEETLDPDR 643
Query: 317 IEELL--FMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQ 374
++L F+ + + AC S+ +L+ G + GL+ + +
Sbjct: 644 FRDVLASFVEGDREAGAETVDALADEFLGDLACYPSITGNTSLTEGSVVGLLTELDDCEN 703
Query: 375 PWV 377
P+
Sbjct: 704 PYA 706
>gi|385338276|ref|YP_005892149.1| DNA mismatch repair protein MutL [Neisseria meningitidis WUE 2594]
gi|433475861|ref|ZP_20433198.1| DNA mismatch repair protein mutL [Neisseria meningitidis 88050]
gi|433515143|ref|ZP_20471916.1| DNA mismatch repair protein mutL [Neisseria meningitidis 2004090]
gi|433518604|ref|ZP_20475339.1| DNA mismatch repair protein mutL [Neisseria meningitidis 96023]
gi|433528511|ref|ZP_20485120.1| DNA mismatch repair protein mutL [Neisseria meningitidis NM3652]
gi|433530719|ref|ZP_20487303.1| DNA mismatch repair protein mutL [Neisseria meningitidis NM3642]
gi|433532981|ref|ZP_20489543.1| DNA mismatch repair protein mutL [Neisseria meningitidis 2007056]
gi|433534776|ref|ZP_20491314.1| DNA mismatch repair protein mutL [Neisseria meningitidis 2001212]
gi|319410690|emb|CBY91069.1| DNA mismatch repair protein MutL [Neisseria meningitidis WUE 2594]
gi|432208970|gb|ELK64941.1| DNA mismatch repair protein mutL [Neisseria meningitidis 88050]
gi|432251124|gb|ELL06496.1| DNA mismatch repair protein mutL [Neisseria meningitidis 96023]
gi|432254939|gb|ELL10272.1| DNA mismatch repair protein mutL [Neisseria meningitidis 2004090]
gi|432265312|gb|ELL20508.1| DNA mismatch repair protein mutL [Neisseria meningitidis NM3652]
gi|432265529|gb|ELL20721.1| DNA mismatch repair protein mutL [Neisseria meningitidis NM3642]
gi|432266337|gb|ELL21523.1| DNA mismatch repair protein mutL [Neisseria meningitidis 2007056]
gi|432271045|gb|ELL26175.1| DNA mismatch repair protein mutL [Neisseria meningitidis 2001212]
Length = 658
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 171/399 (42%), Gaps = 66/399 (16%)
Query: 1 MKLVNEVYHQ-FNNHQYPFIILNIEMSRDSVDVNVTPDKRQI-FMDHEK---LLLATVKV 55
+ V + Y +N P +L +++ ++VDVNV P K +I F D ++ L+ T+
Sbjct: 264 LHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSQQVHQLVFHTLNK 323
Query: 56 HITDSYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHE-----TIPVPSEDNS 110
+ D+ A N+ +S+ N+ EV H+ + P+PSE++S
Sbjct: 324 ALADTRA--------NLTESV---------------GNAGEVLHDITGVVSTPMPSENDS 360
Query: 111 -NFSHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYA 169
N A+ P +PDT + P + R +LSL + + YA
Sbjct: 361 ENLFDSAS--DYPTGNKPDTRNAFGSSGKTAPMPYQAARAPQQHSLSLRESRAAMNT-YA 417
Query: 170 RRTVQAQD------RCVENRFHANIDPSKNKEAESEL---NRVIKKSMFEKMKIVGQFNL 220
+ D R + RF N+ PS+ +++ + + +S + L
Sbjct: 418 ELYKKTDDIDLELNRLEQARF-GNM-PSETPIPKTDTPLSDGLPSQSELPPLGFAIAQLL 475
Query: 221 G-FIIVKYDSDLFIIDQHATDEKYNFETLQK----TTLIKSQKLVVPQNLHLTKINQCIL 275
G +I+ + + L +ID HA E+ N+E +++ ++SQ+L++P + L
Sbjct: 476 GIYILAQAEDSLLLIDMHAAAERVNYEKMKRQRRENGKLQSQRLLIPSTFAASHEECAAL 535
Query: 276 KDNLPVFYKNGFEFSFDSSDDGNVL-LTSLPMSKNTTLGREDI----EELLFMLQHTNST 330
D+ G E S GN L + ++P LG+ D+ +++L L S+
Sbjct: 536 ADHAEALAGFGLEL---SDMGGNTLAVRTVP----AMLGKADVVSLAKDVLGELAQVGSS 588
Query: 331 EHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
+ R + A+ +C SV GR L++ EM L+R+M
Sbjct: 589 QTIEEHENR-ILATMSCHGSVRAGRRLTLPEMNALLRDM 626
>gi|418620509|ref|ZP_13183313.1| DNA mismatch repair protein [Staphylococcus hominis VCU122]
gi|374822639|gb|EHR86659.1| DNA mismatch repair protein [Staphylococcus hominis VCU122]
Length = 674
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 79/395 (20%), Positives = 171/395 (43%), Gaps = 30/395 (7%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K + E YH +YP +NIEM VDVNV P K ++ + E+ L + I +
Sbjct: 265 KAITEGYHTLLTIGRYPICYINIEMDPILVDVNVHPTKLEVRLSKEEQLYNLIIEKIRHA 324
Query: 61 YAIGFTVDGNNMNQSMEQDP------SSDVDMEKIQRS---NSEEVEHETIPVPSEDN-- 109
+ + N+++++ +++ +D E+ Q++ ++++E++ P S +N
Sbjct: 325 FKDRILIPKNDLDRTPKKNKVLHTFEQQKIDFEQKQQNISNQTKQLENKNDPNVSTNNNF 384
Query: 110 SNFSHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYA 169
S SH+ + + + + +E V ++ + Y + DI+ +A +
Sbjct: 385 STISHQYDEEHTSDDSYTREDNEHSSVYNNKRSMDKDY-----FDIQKDILNSLNRAESS 439
Query: 170 RRTVQAQDRCVENR-----FHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFII 224
+ + + N F N+ + ++ + +++ + + M++VGQ + +II
Sbjct: 440 IDNTRHDETNIYNYDENEDFQENVTNQEEQDIKGKVSSTPSRRV-PYMEVVGQVHGTYII 498
Query: 225 VKYDSDLFIIDQHATDEKYNFETLQKTTLIKS---QKLVVPQNLHLTKINQCILKDNLPV 281
+ ++ +F+IDQHA E+ +E ++ S Q L++P H +K Q I+
Sbjct: 499 AQNENGMFMIDQHAAQERIKYEYFREKIGEVSNEVQDLLIPLTFHFSKDEQLIIDQYREE 558
Query: 282 FYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAM 341
K G D ++ S P+ E I++++ ++ + + + A+
Sbjct: 559 LDKVGVHLEHFGGYD--YIVNSYPVWFPKVEAEEIIKDMIELVLNHKKIDVKKMREDAAI 616
Query: 342 FASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
S C+KS+ L EM L+ + + P+
Sbjct: 617 MMS--CKKSIKANHYLKKNEMADLIDQLREAEDPF 649
>gi|385328695|ref|YP_005882998.1| DNA mismatch repair protein [Neisseria meningitidis alpha710]
gi|308389547|gb|ADO31867.1| DNA mismatch repair protein [Neisseria meningitidis alpha710]
Length = 658
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 171/399 (42%), Gaps = 66/399 (16%)
Query: 1 MKLVNEVYHQ-FNNHQYPFIILNIEMSRDSVDVNVTPDKRQI-FMDHEK---LLLATVKV 55
+ V + Y +N P +L +++ ++VDVNV P K +I F D ++ L+ T+
Sbjct: 264 LHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSQQVHQLVFHTLNK 323
Query: 56 HITDSYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHE-----TIPVPSEDNS 110
+ D+ A N+ +S+ N+ EV H+ + P+PSE++S
Sbjct: 324 ALADTRA--------NLTESV---------------GNAGEVLHDITGVVSTPMPSENDS 360
Query: 111 -NFSHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYA 169
N A+ P +PDT + P + R +LSL + + YA
Sbjct: 361 ENLFDSAS--DYPTGNKPDTRNAFGSSGKTAPMPYQAARAPQQHSLSLRESRAAMNT-YA 417
Query: 170 RRTVQAQD------RCVENRFHANIDPSKNKEAESEL---NRVIKKSMFEKMKIVGQFNL 220
+ D R + RF N+ PS+ +++ + + +S + L
Sbjct: 418 ELYKKTDDIDLELNRLEQARF-GNM-PSETPIPKTDTPLSDGLPSQSELPPLGFAIAQLL 475
Query: 221 G-FIIVKYDSDLFIIDQHATDEKYNFETLQK----TTLIKSQKLVVPQNLHLTKINQCIL 275
G +I+ + + L +ID HA E+ N+E +++ ++SQ+L++P + L
Sbjct: 476 GIYILAQAEDSLLLIDMHAAAERVNYEKMKRQRRENGKLQSQRLLIPSTFAASHEECAAL 535
Query: 276 KDNLPVFYKNGFEFSFDSSDDGNVL-LTSLPMSKNTTLGREDI----EELLFMLQHTNST 330
D+ G E S GN L + ++P LG+ D+ +++L L S+
Sbjct: 536 ADHAEALAGFGLEL---SDMGGNTLAVRTVP----AMLGKADVVSLAKDVLGELAQVGSS 588
Query: 331 EHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
+ R + A+ +C SV GR L++ EM L+R+M
Sbjct: 589 QTIEEHENR-ILATMSCHGSVRAGRRLTLPEMNALLRDM 626
>gi|355628055|ref|ZP_09049570.1| hypothetical protein HMPREF1020_03649 [Clostridium sp. 7_3_54FAA]
gi|354819948|gb|EHF04380.1| hypothetical protein HMPREF1020_03649 [Clostridium sp. 7_3_54FAA]
Length = 684
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 164/406 (40%), Gaps = 41/406 (10%)
Query: 2 KLVNEVYHQFN-NHQYPFIILNIEMSRDSVDVNVTPDKRQI-FMDHE---KLLLATVKVH 56
K + + Y F H+YPF +L + + +DVNV P K ++ F D E +++ T+ +
Sbjct: 266 KAIEDAYKPFMMQHKYPFTMLQFTIEPEFLDVNVHPAKMELRFRDGEMVYRMVYHTISMA 325
Query: 57 ITDSYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEA 116
++ I V+ Q + + I+ + E E + S S + E
Sbjct: 326 LSQKELIP-QVELPGGGQESANAQARGLKPVVIKENRPEPFEKRRLQTESLIKSAATSE- 383
Query: 117 NLQQSPET--VEPDTPDETIEVIDDMPRLQGSYRQST--------PVTLSLDIIQDQLKA 166
L PET I DMP + G S P TL + + KA
Sbjct: 384 -LSGEPETSAYTERVSKTAFPAIADMPAVYGRQPASAGMADAAEQPETLRMP---ESPKA 439
Query: 167 RYA---------RRTVQAQDRCVENRFHANIDPSKNKEAESEL--NRVIKKSMFEKMKIV 215
A R V A+ + I P + + +L +++ K + ++
Sbjct: 440 PEAPGPLEFPEQYRPVPAEGKTQNPAGAKEILPEQEPPKQLDLFEEKLLTKQARNEHVLI 499
Query: 216 GQFNLGFIIVKYDSDLFIIDQHATDEKYNFE----TLQKTTLIKSQKLVVPQNLHLTKIN 271
GQ + +V++ +L+IIDQHA EK +E +L+K SQ + P L L+
Sbjct: 500 GQLFDTYWLVQFHDNLYIIDQHAAHEKVLYEKTMASLKKREYT-SQMINPPIILTLSGNE 558
Query: 272 QCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTE 331
+ +LK + F GFE + V ++P + + +E + E++ L T+ +
Sbjct: 559 ELMLKKYMEHFTAVGFEIEHFGGKEYAV--RAVPANLFSIAKKELLMEMIDGL--TDGVD 614
Query: 332 HCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPWV 377
P I AS +C+ +V A+S E L+ + ++ P+
Sbjct: 615 QGTPDIINEKIASMSCKAAVKGNHAMSAAEADSLIDELLELENPYA 660
>gi|116493021|ref|YP_804756.1| DNA mismatch repair protein [Pediococcus pentosaceus ATCC 25745]
gi|122265515|sp|Q03EQ8.1|MUTL_PEDPA RecName: Full=DNA mismatch repair protein MutL
gi|116103171|gb|ABJ68314.1| DNA mismatch repair protein MutL [Pediococcus pentosaceus ATCC
25745]
Length = 645
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 119/281 (42%), Gaps = 44/281 (15%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYA----IGFTVDGN 70
+YP +LNI+ VDVNV P K+++ + E+ LL + + + A I VD
Sbjct: 279 RYPVAVLNIKTDPILVDVNVHPTKQEVRISEEQTLLDLISKAVFNELADKNLIPDAVD-- 336
Query: 71 NMNQSMEQDPSSD-VDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDT 129
N+ +S + SS+ +D+ ++ S S E+E + + +P DN E N+ S VEP+
Sbjct: 337 NLKKSRVKVSSSEQLDLARMAISGSFEMEQDHVTIPDTDNDEVEKEVNI--SDRYVEPE- 393
Query: 130 PDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANID 189
P + S RQ L D I + K +YA D V N
Sbjct: 394 -----------PIVINS-RQD----LKSDTIA-EFKTKYA------NDAVVNNTVEDGDQ 430
Query: 190 PSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQ 249
P EL F + +GQ + ++ + + L+IIDQHA E+ N+E +
Sbjct: 431 P--------ELKEKDAVQRFPTLTYIGQMHGTYLFAEAEDGLYIIDQHAAQERINYEYYR 482
Query: 250 KTTLIKS---QKLVVPQNLHLTKINQCILKDNLPVFYKNGF 287
S Q L+VP L + + +K+ V G
Sbjct: 483 VQIGEVSDDQQDLLVPIYLDYSTTDAIRIKEKQTVLESCGL 523
>gi|83589962|ref|YP_429971.1| DNA mismatch repair protein MutL [Moorella thermoacetica ATCC
39073]
gi|83572876|gb|ABC19428.1| DNA mismatch repair protein MutL [Moorella thermoacetica ATCC
39073]
Length = 620
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 14/174 (8%)
Query: 206 KSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKS---QKLVVP 262
K + ++ +GQ +I+ + L+IIDQHA E+ +E L K S Q L P
Sbjct: 432 KQVLPPLRALGQVFNTYILAGGEDGLYIIDQHAAHERCRYEALVKEGTPGSHPAQMLEPP 491
Query: 263 QNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLF 322
LHL Q L D + + G F + G LL S+P+ RE +E+ F
Sbjct: 492 LPLHLAPDMQVKLIDQIITLRELG--FIIEEFGTGVFLLRSVPLGIPPGKEREVLED--F 547
Query: 323 MLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+ + T P R+ + AC ++ G++L+ EM L+ ++ +D P+
Sbjct: 548 LAESTLPA----PERLLKLI---ACHGAIKAGQSLAGAEMQKLLDDLRGVDHPY 594
>gi|304387173|ref|ZP_07369416.1| DNA mismatch repair protein MutL [Neisseria meningitidis ATCC
13091]
gi|304338740|gb|EFM04851.1| DNA mismatch repair protein MutL [Neisseria meningitidis ATCC
13091]
Length = 658
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 93/398 (23%), Positives = 166/398 (41%), Gaps = 64/398 (16%)
Query: 1 MKLVNEVYHQ-FNNHQYPFIILNIEMSRDSVDVNVTPDKRQI-FMDHEK---LLLATVKV 55
+ V + Y +N P +L +++ ++VDVNV P K +I F D ++ L+ T+
Sbjct: 264 LHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSQQVHQLVFHTLNK 323
Query: 56 HITDSYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETI-----PVPSEDNS 110
+ D+ A ++ +S+ N+ EV HE P+PSE++S
Sbjct: 324 ALADTRA--------DLTESV---------------GNAGEVLHEITGVTPAPMPSENDS 360
Query: 111 -NFSHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYA 169
N + A+ P +PDT + P + R +LSL + + YA
Sbjct: 361 ENLFNRAS--DYPTGNKPDTRNAFGASGKTAPMPYQAARAPQQRSLSLRESRAAMNT-YA 417
Query: 170 RRTVQAQD------RCVENRFHANIDPSKNKEAESEL---NRVIKKSMFEKMKIVGQFNL 220
+ D R + RF N+ PS+ +++ + + +S + L
Sbjct: 418 ELYKKTDDIDLELSRFEQARF-GNM-PSETPAPQTDTPLSDGIPSQSELPPLGFAIAQLL 475
Query: 221 G-FIIVKYDSDLFIIDQHATDEKYNFETL----QKTTLIKSQKLVVPQNLHLTKINQCIL 275
G +I+ + + L +ID HA E+ N+E + Q+ ++SQ+L++P + L
Sbjct: 476 GIYILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGRLQSQRLLIPVTFAASHEECAAL 535
Query: 276 KDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDI----EELLFMLQHTNSTE 331
D G E S GN L + LG+ D+ ++L L S++
Sbjct: 536 ADYAETLAGFGLEL---SDMGGNTLAVR---AAPAMLGKSDVVSLARDVLGELAQVGSSQ 589
Query: 332 HCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
R + A+ +C S+ GR L++ EM L+R+M
Sbjct: 590 TIEEHENR-ILATMSCHGSIRAGRRLTLPEMNALLRDM 626
>gi|323486938|ref|ZP_08092253.1| DNA mismatch repair protein mutL [Clostridium symbiosum WAL-14163]
gi|323399710|gb|EGA92093.1| DNA mismatch repair protein mutL [Clostridium symbiosum WAL-14163]
Length = 684
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 92/405 (22%), Positives = 164/405 (40%), Gaps = 39/405 (9%)
Query: 2 KLVNEVYHQFN-NHQYPFIILNIEMSRDSVDVNVTPDKRQI-FMDHE---KLLLATVKVH 56
K + + Y F H+YPF +L + + +DVNV P K ++ F D E +++ T+ +
Sbjct: 266 KAIEDAYKPFMMQHKYPFTMLQFTIEPEFLDVNVHPAKMELRFRDGEMVYRMVYHTISMA 325
Query: 57 ITDSYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEA 116
++ I V+ Q + + I+ + E E + S S + E
Sbjct: 326 LSQKELIP-QVELPGGGQESANAQARGLKPVVIKENRPEPFEKRRLQTESLIKSAATSE- 383
Query: 117 NLQQSPET--VEPDTPDETIEVIDDMPRLQGSYRQST--------PVTLSLDIIQDQLKA 166
L PET I DMP + G S P TL + +A
Sbjct: 384 -LSGEPETSAYTERVSKTAFPAIADMPAVYGRQPASAGMADAAEQPETLRMPGTPKAPEA 442
Query: 167 --------RYARRTVQAQDRCVENRFHANIDPSKNKEAESEL--NRVIKKSMFEKMKIVG 216
+Y R V A+ + I P + + +L +++ K + ++G
Sbjct: 443 PGPLEFPEQY--RPVPAEGKTQNPAGAKEILPKQEPPKQLDLFEEKLLTKQARNEHVLIG 500
Query: 217 QFNLGFIIVKYDSDLFIIDQHATDEKYNFE----TLQKTTLIKSQKLVVPQNLHLTKINQ 272
Q + +V++ +L+IIDQHA EK +E +L+K SQ + P L L+ +
Sbjct: 501 QLFDTYWLVQFHDNLYIIDQHAAHEKVLYEKTMASLKKREYT-SQMINPPIILTLSGNEE 559
Query: 273 CILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEH 332
+LK + F GFE + V ++P + + +E + E++ L T+ +
Sbjct: 560 LMLKKYMEHFTAVGFEIEHFGGKEYAV--RAVPANLFSIAKKELLMEMIDGL--TDGVDQ 615
Query: 333 CRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPWV 377
P I AS +C+ +V A+S E L+ + ++ P+
Sbjct: 616 GTPDIINEKIASMSCKAAVKGNHAMSAAEADSLIDELLELENPYA 660
>gi|404496910|ref|YP_006721016.1| DNA mismatch repair protein [Geobacter metallireducens GS-15]
gi|403378082|gb|ABB32282.2| DNA mismatch repair protein MutL [Geobacter metallireducens GS-15]
Length = 594
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 56/103 (54%), Gaps = 4/103 (3%)
Query: 190 PSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQ 249
P+ ++ AE E +R + + F ++ I+GQF+ +I+ + SDL IIDQHA E+ FE L+
Sbjct: 386 PAPDQSAE-EPDRPMDRGYFSRLAIIGQFHASYILCQDGSDLVIIDQHAAHERVAFERLK 444
Query: 250 ---KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEF 289
++ Q L+ P L L+ L+++ + GF+
Sbjct: 445 AQFAAGGVEGQGLLFPDTLELSHREVAELREHGEELRRIGFDL 487
>gi|418067430|ref|ZP_12704773.1| DNA mismatch repair protein MutL [Geobacter metallireducens RCH3]
gi|373558836|gb|EHP85159.1| DNA mismatch repair protein MutL [Geobacter metallireducens RCH3]
Length = 540
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 56/103 (54%), Gaps = 4/103 (3%)
Query: 190 PSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQ 249
P+ ++ AE E +R + + F ++ I+GQF+ +I+ + SDL IIDQHA E+ FE L+
Sbjct: 414 PAPDQSAE-EPDRPMDRGYFSRLAIIGQFHASYILCQDGSDLVIIDQHAAHERVAFERLK 472
Query: 250 ---KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEF 289
++ Q L+ P L L+ L+++ + GF+
Sbjct: 473 AQFAAGGVEGQGLLFPDTLELSHREVAELREHGEELRRIGFDL 515
>gi|312114924|ref|YP_004012520.1| DNA mismatch repair protein MutL [Rhodomicrobium vannielii ATCC
17100]
gi|311220053|gb|ADP71421.1| DNA mismatch repair protein MutL [Rhodomicrobium vannielii ATCC
17100]
Length = 605
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 84/170 (49%), Gaps = 19/170 (11%)
Query: 209 FEKMKIV-GQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL---IKSQKLVVPQN 264
+E++ + Q + +I+ + + +IDQHA E+ +E L+ L I Q L++P+
Sbjct: 415 YERLGMARAQVHNTYILSETPDGVILIDQHAAHERIVYEKLKAALLGGRIARQLLLIPEI 474
Query: 265 LHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFML 324
+ + + + ++ ++ +G + +S G +++ +P LG D++ L+ L
Sbjct: 475 VEMPEDDAALVAEHAETVAGSG--LALESFGPGAIIVREVP----ALLGHCDLQTLVRDL 528
Query: 325 QH-----TNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
H N+ E +R+ A+ A+ AC SV GR + + EM L+R M
Sbjct: 529 AHELKDSANTVE----ARLHAICATMACHGSVRAGRPMRLDEMNALLREM 574
>gi|225567943|ref|ZP_03776968.1| hypothetical protein CLOHYLEM_04016 [Clostridium hylemonae DSM
15053]
gi|225163231|gb|EEG75850.1| hypothetical protein CLOHYLEM_04016 [Clostridium hylemonae DSM
15053]
Length = 695
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 94/422 (22%), Positives = 177/422 (41%), Gaps = 64/422 (15%)
Query: 2 KLVNEVYHQFN-NHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K + + Y F H+YPF++L++E+ + +DVNV P K ++ ++++ + +V
Sbjct: 266 KAIEDAYKDFTMQHKYPFVVLHMEIDGEHIDVNVHPTKMELRFNNQQDVYNSV------Y 319
Query: 61 YAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQ 120
A+ + M +E + ++ + E P PS + + +++
Sbjct: 320 EAVDRGLHAEEMIPHVELPEPPGGETPSVRPA-------EQKPEPSPEKEYAAQRPPVKE 372
Query: 121 SPETVEP--DTPDETIEVIDDMPRLQGSYRQSTP---VTLSLDIIQDQLKARYARRT--- 172
+ +P +TP +T V + R + + T V L+ ++ ++++ + + +
Sbjct: 373 PIQQAQPMRETPRQTQPVKEQPVRAEAPSGKGTAQRDVNYFLEEMKKRVRSYHEQNSSAE 432
Query: 173 -----------VQAQDRCVENRFHANIDPSKN---------KEAES-----ELNRVIKKS 207
+QA DR E +A D + KE +S E +
Sbjct: 433 VQDKNAIFKPGIQA-DRIREAAAYAKTDAKADDVQRNSAPLKETDSAGKQMESGTAKQMD 491
Query: 208 MFEK----------MKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFE-TLQ--KTTLI 254
MFE+ K+VGQ + IV++ L+IIDQHA E+ +E TL+ KT
Sbjct: 492 MFEEKFLDRERKAEYKLVGQVFDTYWIVEFHDSLYIIDQHAAHERVLYERTLKNMKTREF 551
Query: 255 KSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGR 314
SQ + P L LT +L + F K GFE D + + ++P + + +
Sbjct: 552 TSQYISPPIILDLTMQEAELLTMYMEQFTKVGFEIEEFGQD--SYAVRAVPDNLFSIAKK 609
Query: 315 EDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQ 374
E + E++ L S P I AS +C+ +V LS E+ L+ + ++
Sbjct: 610 ELLMEMIDSLSDEIS-RTLSPDLIDEKVASMSCKAAVKGNMKLSAAEVDTLINELLMLEN 668
Query: 375 PW 376
P+
Sbjct: 669 PY 670
>gi|448306716|ref|ZP_21496619.1| DNA mismatch repair protein MutL [Natronorubrum bangense JCM 10635]
gi|445597227|gb|ELY51303.1| DNA mismatch repair protein MutL [Natronorubrum bangense JCM 10635]
Length = 730
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 103/243 (42%), Gaps = 28/243 (11%)
Query: 156 SLDIIQDQLKARYA---RRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKK------ 206
++D +D+ A A R ++ D C F + DP+ +E + + + ++
Sbjct: 464 TIDTSRDEPTASAASSVRDATRSSDDC----FSSEGDPNATREPDRKFDAGTEQQTLTGD 519
Query: 207 ------SMFEKM---KIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL--IK 255
+ F+ + +++GQ+ +++ + L +IDQHA DE+ N+E LQ+
Sbjct: 520 VAAGDETAFDSLPSLRVLGQYTDTYLVCETADGLVLIDQHAADERVNYERLQQAFADDPA 579
Query: 256 SQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGRE 315
+Q L P +L LT + + + G F D DD V +T++P TL E
Sbjct: 580 AQALASPVDLELTAVEAEAFESYREALSRLG--FYADRVDDRTVAVTTVPAVLEETLEPE 637
Query: 316 DIEELL--FMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRID 373
+ ++L F+ + + AC S+ +L+ G + L+ + +
Sbjct: 638 QLRDVLASFVEGDRETGAETVDALADEFLGDLACYPSITGNTSLTEGSVVDLLEALDGCE 697
Query: 374 QPW 376
P+
Sbjct: 698 NPY 700
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%)
Query: 10 QFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLL 49
Q +YPF+ L +E+ D+VDVNV P KR++ D + +
Sbjct: 288 QLGGDRYPFVTLFLEVPGDAVDVNVHPRKREVRFDDDDAV 327
>gi|152996647|ref|YP_001341482.1| DNA mismatch repair protein [Marinomonas sp. MWYL1]
gi|150837571|gb|ABR71547.1| DNA mismatch repair protein MutL [Marinomonas sp. MWYL1]
Length = 641
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 84/371 (22%), Positives = 151/371 (40%), Gaps = 57/371 (15%)
Query: 13 NHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKL----LLATVKVHITDSYAIGFTVD 68
N ++P +L +E+ +VDVNV P K ++ +L L + + I D +
Sbjct: 282 NGRHPTFVLYLELDPSTVDVNVHPTKHEVRFRDGRLVHDFLFSRIHKAIADVRPESESAP 341
Query: 69 GNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPD 128
MN + +P S S E +P+ SN S ++ T
Sbjct: 342 -TGMNDTSSNEPVS---------YGSNITEQSALPL-----SNRSGSTSMDWMRSTSNSL 386
Query: 129 TPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANI 188
E +D M R+ G Y Q Y +T + E R I
Sbjct: 387 GSSEVRGQLDGMGRMAG-YAQE-----------------YVSKTEEIDPETGEIR---EI 425
Query: 189 DPSKNKEAESELNRVIKKSMFEKMKIVG----QFNLGFIIVKYDSDLFIIDQHATDEKYN 244
P+ +SE V ++ ++ + +G Q + +I+ + + L ++D HA E+
Sbjct: 426 APASTL-GQSENPLVGREDDYQAVPPLGFAVAQLHGVYILSESEQGLILVDMHAAHERIV 484
Query: 245 FETLQKTTL---IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLL 301
+E ++ I SQ L+VP N+ +++ +++++ VF F F + + + ++
Sbjct: 485 YERMKAAFYQKNISSQPLLVPINIAVSQSEADLVEESGEVF--EAFGFRVERTGLESAMV 542
Query: 302 TSLPMSKNTTLGREDIEELLFML---QHTNSTEHCRPSRIRAMFASRACRKSVMIGRALS 358
+P+ L R D+E L+ + TN SR + AS AC +V R L+
Sbjct: 543 REVPV----ILIRGDVEGLVRDVISDLSTNGVSDLMESRANELMASMACHGAVRANRKLT 598
Query: 359 VGEMTGLVRNM 369
+ EM L+R+M
Sbjct: 599 IAEMNSLLRDM 609
>gi|433432037|ref|ZP_20407732.1| DNA mismatch repair protein MutL [Haloferax sp. BAB2207]
gi|432193692|gb|ELK50392.1| DNA mismatch repair protein MutL [Haloferax sp. BAB2207]
Length = 563
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 84/186 (45%), Gaps = 12/186 (6%)
Query: 197 ESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQ---KTTL 253
+S L V S+F+ ++++G+F +++ + D +L ++DQHA E+ N+E L+ ++
Sbjct: 355 DSSLAPVEAASVFDDLRVIGRFRGLYLLCEADDELLVVDQHAAHERINYERLREAVESAG 414
Query: 254 IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFE-FSFDSSDD-GNVLLTSLPMSKNTT 311
I S + P + L+ + +L N + K GF F D G + ++P
Sbjct: 415 IDSAAVDPPATVSLSPGDAALLDANRDLVEKLGFRVVEFGEGDGTGTYRVEAVPAP---- 470
Query: 312 LGREDIEELLF-MLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMG 370
LGR + L ++ S + P + AC S+ G L+ E LV +G
Sbjct: 471 LGRPFAPDALADVVADVASGDDADPR--DELLKDLACHPSIKAGDDLTDDEAARLVERLG 528
Query: 371 RIDQPW 376
P+
Sbjct: 529 SCGTPY 534
>gi|345874903|ref|ZP_08826701.1| DNA mismatch repair protein mutL [Neisseria weaveri LMG 5135]
gi|343969839|gb|EGV38045.1| DNA mismatch repair protein mutL [Neisseria weaveri LMG 5135]
Length = 660
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 76/157 (48%), Gaps = 17/157 (10%)
Query: 222 FIIVKYDSDLFIIDQHATDEKYNFETL--QKTTL--IKSQKLVVPQNLHLTKINQCILKD 277
+I+ + + L +ID HA E+ N+E + Q+ TL ++SQ+L++P + L D
Sbjct: 480 YILAQAEDSLLLIDMHAAAERINYEKMKTQRNTLGSLQSQRLLIPVTFAASHEETAALAD 539
Query: 278 NLPVFYKNGFEFSFDSSDDGN--VLLTSLPMSKNTTLGREDIEELLF-MLQHT--NSTEH 332
+ G E S D G + + ++P LG+ D+ L ML+ N +
Sbjct: 540 HAEALRGFGMELS----DMGGNTIAVRAVP----AMLGKSDVASLARDMLREIAQNGSSQ 591
Query: 333 CRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
+R + ++ AC SV GR L++ EM L+R+M
Sbjct: 592 TIEARENQILSTMACHGSVRAGRQLTLPEMNALLRDM 628
>gi|257051097|ref|YP_003128930.1| DNA mismatch repair protein MutL [Halorhabdus utahensis DSM 12940]
gi|256689860|gb|ACV10197.1| DNA mismatch repair protein MutL [Halorhabdus utahensis DSM 12940]
Length = 709
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 4/96 (4%)
Query: 212 MKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL--IKSQKLVVPQNLHLTK 269
M+++GQF +++ + D+ L +IDQHA DE+ N+E L+ +Q L P + LT
Sbjct: 510 MRVLGQFQETYVVAETDTGLVLIDQHAADERINYERLRDAFAGETTTQALAQPVEIDLTA 569
Query: 270 INQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLP 305
+ +D + G FS + DD V +T++P
Sbjct: 570 RESSLFEDFQAALARLG--FSAERVDDRTVAVTTVP 603
>gi|241894949|ref|ZP_04782245.1| DNA mismatch repair protein MutL [Weissella paramesenteroides ATCC
33313]
gi|241871667|gb|EER75418.1| DNA mismatch repair protein MutL [Weissella paramesenteroides ATCC
33313]
Length = 680
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 87/387 (22%), Positives = 164/387 (42%), Gaps = 55/387 (14%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMNQ 74
++P IL I+M VDVNV P K ++ + E L++ ++ + + V+ N +
Sbjct: 285 RFPIAILQIKMDPLLVDVNVHPQKHEVRLSKETQLMSLIEEMVVQRF-----VNENLIPN 339
Query: 75 SMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFS---HEANL---QQSPETVEPD 128
+ E N + H++ VP DN F EA++ Q++ +++
Sbjct: 340 AYE---------------NYMQGNHDSYVVPEHDNDQFMTQLQEASVTFHQETGRSLQNI 384
Query: 129 TPDETIEV----IDDMPRLQGSYRQSTPV-----TLSLDIIQDQLKARYARRTVQAQDRC 179
+ DE IE+ I + P L + Q+ V T S D+++ ++ A+ T +
Sbjct: 385 SSDE-IEIPEIPIANDPDLSTTQTQNDEVVPIVITKSQDLVKKSVRDFVAKYTAETPSLP 443
Query: 180 VENRFHANIDPSKNKEAESELNR--VIKKSMFEK----MKIVGQFNLGFIIVKYDSDLFI 233
F DP +E ++ S +K ++ +GQ + F+ + +I
Sbjct: 444 ----FTEAADPVAAEEVSLSFTNTDLVDDSRHDKPFPDLQYIGQMHGTFLFAQSPEGFYI 499
Query: 234 IDQHATDEKYNFETLQK---TTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFS 290
+DQHA E+ +E ++ ++SQKL+VP L KI+ ILK +
Sbjct: 500 VDQHAAQERIKYEYYREEIGKVGLESQKLLVPIVLTYPKID--ILKIQAHASQLEQVGLN 557
Query: 291 FDSSDDGNVLLTSLPMSKNTTLGREDIEELL-FMLQHTNSTEHCRPSRIRAMFASRACRK 349
+S D V++ P I E++ ++L+ N T + M +C++
Sbjct: 558 LESFGDDAVIVREHPAWIEKGQEEATIREMVDWLLRDGNITTKDFREKTAIMM---SCKR 614
Query: 350 SVMIGRALSVGEMTGLVRNMGRIDQPW 376
S+ AL+ E GL++ + + P+
Sbjct: 615 SIKANWALNDYEARGLLKQLAQAQNPY 641
>gi|421806977|ref|ZP_16242839.1| DNA mismatch repair protein, C-terminal domain protein
[Acinetobacter baumannii OIFC035]
gi|410417520|gb|EKP69290.1| DNA mismatch repair protein, C-terminal domain protein
[Acinetobacter baumannii OIFC035]
Length = 650
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 155/372 (41%), Gaps = 54/372 (14%)
Query: 11 FNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGN 70
+ HQ+ +L +E+ +++DVNV P K +I +++ + V+ ++ ++ A F
Sbjct: 288 LHGHQHSSYLLFLEVDPENIDVNVHPTKHEIRFLNQREVHEFVRHYVKETLA-QFQTASA 346
Query: 71 NMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETV--EPD 128
++ Q+M+ D + ++ ++ + + H T Q+ +T +P+
Sbjct: 347 DLAQAMKVDDTQNLSVQPQPKYQEQFTLHRTA-----------------QAADTAVDKPN 389
Query: 129 TPDETIEVIDDM--PRLQG-SYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFH 185
+ E++ D R Q Y + TP + + LK A Q + V+
Sbjct: 390 GYQPSTELLTDFNNSRPQAVHYAEQTPKYNGSAQLNNALKTYLAPLRDQPANFSVDE--- 446
Query: 186 ANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNF 245
NI+P V K F + Q + +I+ + L I+D HA E+
Sbjct: 447 -NIEP------------VAKVDEFPLGIAIAQLHGIYILAQNTEGLIIVDMHAAHERILL 493
Query: 246 ETLQ----KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLL 301
+ ++ K SQ+L++P+ + ++++ ++D P + G E D D V++
Sbjct: 494 QQMKNAWDKPEFWTSQQLLIPKVISISRMQAVRVEDLKPQLERLGLE--IDLYGDEQVIV 551
Query: 302 TSLPMSKNTTLGREDIE----ELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRAL 357
+P L + D E ELL L + + R + A AC +V R L
Sbjct: 552 RGVP----AILQKADFENLIPELLNDLDPNDEAQGLLQKR-DELLAGMACHGAVRAHRQL 606
Query: 358 SVGEMTGLVRNM 369
S+ EM L+R M
Sbjct: 607 SLSEMNALLRQM 618
>gi|425746301|ref|ZP_18864331.1| DNA mismatch repair protein MutL [Acinetobacter baumannii WC-323]
gi|425486178|gb|EKU52550.1| DNA mismatch repair protein MutL [Acinetobacter baumannii WC-323]
Length = 648
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 147/366 (40%), Gaps = 42/366 (11%)
Query: 11 FNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVH-ITDSYAIGFTVDG 69
+ HQ+ +L +E+ +++DVNV P K HE L +VH YA
Sbjct: 286 LHGHQHSSYLLFLEVDPENIDVNVHPTK------HEIRFLNQREVHEFVRHYA------- 332
Query: 70 NNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDT 129
++ Q ++ D+ + +++ + P P H A ++ +P+ +P
Sbjct: 333 ---KATLSQFQTATADLAQAMKTDGADDNFNYQPQPKYQEQFNLHRAAVEAAPQATQP-- 387
Query: 130 PDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANID 189
EV D L + QS P + + Q Q + +Y AQ + N +
Sbjct: 388 ----AEVSTD---LLTDFHQSRPQAVQYNSAQTQ-QPKY---NGSAQ---LNNALKTYLA 433
Query: 190 PSKNKE--AESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFET 247
P +++ A E N + F + Q + +I+ + L I+D HA E+ +
Sbjct: 434 PLRDESETATEEDNTPSRVDEFPLGIAIAQLHGIYILAQNTEGLIIVDMHAAHERILLQQ 493
Query: 248 LQ----KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTS 303
++ K SQ+L++P+ + +T++ ++D + G E D D V++
Sbjct: 494 MKSAWDKPEFWTSQQLLIPKVVSITRMQATRIEDLQSQLQRLGLE--IDQYGDEQVIVRG 551
Query: 304 LPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMT 363
+P + I ELL L + R + A AC +V R LS+ EM
Sbjct: 552 VPAILHKADFANLIPELLNDLDPNDEARGLLQKR-DELLAGMACHGAVRAHRQLSLSEMN 610
Query: 364 GLVRNM 369
L+R M
Sbjct: 611 ALLRQM 616
>gi|349574454|ref|ZP_08886403.1| DNA mismatch repair protein MutL [Neisseria shayeganii 871]
gi|348013962|gb|EGY52857.1| DNA mismatch repair protein MutL [Neisseria shayeganii 871]
Length = 639
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 90/397 (22%), Positives = 169/397 (42%), Gaps = 81/397 (20%)
Query: 1 MKLVNEVYHQ-FNNHQYPFIILNIEMSRDSVDVNVTPDKRQI-FMDHE---KLLLATVKV 55
+ V + Y +N P +L +E+ + VDVNV P K +I F D + +L+ T+
Sbjct: 264 LHAVKQAYRDVLHNQIVPSFVLFLELPPEMVDVNVHPTKTEIRFRDSQAIHRLVFHTLNK 323
Query: 56 HITDSYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPV-PSEDNSNFSH 114
+ D+ A D + V SN+ V H+ + + P+ D+
Sbjct: 324 ALADTRA----------------DQTESV-------SNAGAVLHDMLGITPAGDSP---- 356
Query: 115 EANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQS--TPV-------TLSLDIIQDQLK 165
QQ+P + ET+ + R G R + TP TLSL +D L+
Sbjct: 357 ----QQAPTSF---FAQETLSAV----RPSGGSRPAAYTPAARPPQQRTLSLQESRDALR 405
Query: 166 ARYA---RRT--VQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNL 220
A YA RR+ A V + + + ++ SE + + ++ + + I
Sbjct: 406 A-YAELYRRSDDETALPEAVRSAIESALPEEHSQNDGSEPHYPLGFAIAQLLGI------ 458
Query: 221 GFIIVKYDSDLFIIDQHATDEKYNFETLQK----TTLIKSQKLVVPQNLHLTKINQCILK 276
+I+ + + L ++D HA E+ N+E ++ + + SQ+L++P + L+
Sbjct: 459 -YILAQAEDSLVLVDMHAAAERVNYEKMKAQRALSGSLNSQQLLIPVTFEAGREEMAALE 517
Query: 277 DNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPS 336
++ + G S + ++ ++ + ++P L + D+ L + H + EH +
Sbjct: 518 EHADALQRFGLHCS--ALNERSIAVRAVP----NMLAKTDVAALARAVLH-DLAEHGQSH 570
Query: 337 RIRAM----FASRACRKSVMIGRALSVGEMTGLVRNM 369
I A+ + AC SV GR L++ EM L+R+M
Sbjct: 571 SIEALENHILGTLACHGSVRAGRRLTLPEMNALLRDM 607
>gi|242242580|ref|ZP_04797025.1| DNA mismatch repair protein MutL [Staphylococcus epidermidis
W23144]
gi|420174934|ref|ZP_14681380.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM061]
gi|420191655|ref|ZP_14697566.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM023]
gi|242234007|gb|EES36319.1| DNA mismatch repair protein MutL [Staphylococcus epidermidis
W23144]
gi|394244467|gb|EJD89809.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM061]
gi|394265806|gb|EJE10453.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM023]
Length = 645
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 83/381 (21%), Positives = 160/381 (41%), Gaps = 31/381 (8%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K + E YH ++P +NI+M VDVNV P K ++ + E L + I ++
Sbjct: 265 KAILEGYHTLLTIGRFPICYINIQMDPILVDVNVHPTKLEVRLSKEDQLYDLIVTKIREA 324
Query: 61 YAIGFTVDGNNMNQSMEQDPSSDV-DMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQ 119
+ + N++N++ +++ + + +KI + ET D + +H+
Sbjct: 325 FKDKILIPQNDLNRTPKKNKVLETFEQQKINFEKKQSQIGETSAPYVHDQKDKNHDVESH 384
Query: 120 QSPETVEPDTPDETIEVIDDMP-RLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDR 178
++ T +E+ EV +++ + +Y QS L D+ QD Y Q++D
Sbjct: 385 RNNLDSTSSTNNESTEVSNELNNHIDDTYLQSQKEVL-FDMEQDT-SNEYEILNQQSKD- 441
Query: 179 CVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHA 238
K +++ RV M+IVGQ + +II + ++ +F+IDQHA
Sbjct: 442 ------------IKGTVSQTPHRRV------PYMEIVGQVHGTYIIAQNENGMFMIDQHA 483
Query: 239 TDEKYNFETLQKT---TLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSD 295
E+ +E ++ + Q L++P H +K Q I+ K G
Sbjct: 484 AQERIKYEYFREKIGEVTNEVQNLLIPLTFHFSKDEQMIIDQYKDELDKVGVHLEHFGGH 543
Query: 296 DGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGR 355
D ++ S P+ E I++++ ++ S + + A+ S C+KS+
Sbjct: 544 D--YIVNSYPVWFPKVEAEEIIKDMIELVLKHKSVDVKKIREDAAIMMS--CKKSIKANH 599
Query: 356 ALSVGEMTGLVRNMGRIDQPW 376
L EM L+ + + P+
Sbjct: 600 YLKNNEMADLIDQLREAEDPF 620
>gi|293399028|ref|ZP_06643193.1| DNA mismatch repair protein mutL [Neisseria gonorrhoeae F62]
gi|291610442|gb|EFF39552.1| DNA mismatch repair protein mutL [Neisseria gonorrhoeae F62]
Length = 654
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 94/402 (23%), Positives = 161/402 (40%), Gaps = 76/402 (18%)
Query: 1 MKLVNEVYHQ-FNNHQYPFIILNIEMSRDSVDVNVTPDKRQI-FMDH---EKLLLATVKV 55
+ V + Y +N P +L +E+ ++VDVNV P K +I F D +L+ T+
Sbjct: 264 LHAVKQAYRDVLHNALTPAFVLFLELPPEAVDVNVHPTKTEIRFRDSRQVHQLVFHTLNK 323
Query: 56 HITDSYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETI-----PVPSE-DN 109
+ D+ A N+ +S+ SN+ EV H+ P+PSE D
Sbjct: 324 ALADTRA--------NLTESV---------------SNAGEVLHDITGVTPAPMPSENDG 360
Query: 110 SNFSHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDII--QDQLKAR 167
N A+ P +PDT + GS ++ P+ Q L R
Sbjct: 361 ENLFDSAS--NHPTGNKPDTRNAF-----------GSSGKTAPMPYQAARAPQQHSLSLR 407
Query: 168 YARRTVQAQDRCVENRFHANIDPSK-------NKEAESELNRVI----KKSMFEKMKIVG 216
+R + + + +++ S+ N +ES N V + S +
Sbjct: 408 ESRAAMDTYAELYKKTDNIDLELSQFEQARFGNMPSESSTNNVSDGIGQASELPPLGFAI 467
Query: 217 QFNLG-FIIVKYDSDLFIIDQHATDEKYNFETL----QKTTLIKSQKLVVPQNLHLTKIN 271
LG +I+ + + L +ID HA E+ N+E + Q+ ++SQ L++P +
Sbjct: 468 AQLLGIYILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGNLQSQHLLIPVTFAASHEE 527
Query: 272 QCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDI----EELLFMLQHT 327
L D+ G E S GN L + LG+ D+ ++L L
Sbjct: 528 CAALADHAETLAGFGLEL---SDMGGNTLAVR---AAPVMLGKSDVVSLARDVLGELAQV 581
Query: 328 NSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
S++ R + A+ +C S+ GR L++ EM L+R+M
Sbjct: 582 GSSQTIASHENR-ILATMSCHGSIRAGRRLTLPEMNALLRDM 622
>gi|346306309|ref|ZP_08848467.1| hypothetical protein HMPREF9457_00176 [Dorea formicigenerans
4_6_53AFAA]
gi|345900114|gb|EGX69942.1| hypothetical protein HMPREF9457_00176 [Dorea formicigenerans
4_6_53AFAA]
Length = 687
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 92/424 (21%), Positives = 185/424 (43%), Gaps = 76/424 (17%)
Query: 2 KLVNEVYHQFN-NHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K + + Y F H+YPF++L +++ + VDVNV P K + ++++ + T+ + D
Sbjct: 266 KAIEDGYKDFTMQHKYPFVVLYLDVDTEHVDVNVHPTKMDVRFNNQQEIYNTLFAAVDDG 325
Query: 61 YAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQ 120
E++ +V ++ I+ + + +P SE H L+
Sbjct: 326 L--------------HERELIPEVTLDDIKIPEEPKESKKDLPKKSEAE----HTEKLRT 367
Query: 121 SPETVEPDTPDETIE-VIDDMPRLQGSY--------RQSTPVTLSLD--------IIQDQ 163
S ++ P DE ++ +++M + SY +++T + D +QD
Sbjct: 368 SLQS--PQNEDEKLQYFMNEMKKRVYSYHEALHENKQETTHASSYTDSCKPQKNVSVQDS 425
Query: 164 LKARYARRTVQAQDRCVENR---FHANIDPSKNKEAES--------------------EL 200
K ++ + A D C + ++ +P +N +A+S +L
Sbjct: 426 YK---PQKNIPAPDSCKPQKNVQAQSSYEPQQNMQAQSSQIAEMPNYTARQVPAGKPQQL 482
Query: 201 N----RVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFE-TLQ--KTTL 253
N ++++ + KI+GQ + +V++ +L+IIDQHA E+ +E TL+ KT
Sbjct: 483 NFFEEKLLEPQAKAEHKIIGQVFDTYWLVEFHDNLYIIDQHAAHERVLYEQTLKGMKTRE 542
Query: 254 IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLG 313
SQ + P L+L+ +L+ + F + GFE D + + ++P + +
Sbjct: 543 FTSQLISPPIVLNLSMQEAELLRLYMDQFTRIGFEIEEFGQD--SYAVRAVPDNLFSIAK 600
Query: 314 REDIEELLFMLQHTNSTEHCRPSR-IRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRI 372
+E + E++ L ++ PS I AS +C+ +V LS E+ L+ + +
Sbjct: 601 KELLMEMIDSL--SDEINRNAPSNLIDEKIASMSCKAAVKGNMRLSAAEVDTLITELLSL 658
Query: 373 DQPW 376
D P+
Sbjct: 659 DNPY 662
>gi|291043745|ref|ZP_06569461.1| DNA mismatch repair protein mutL [Neisseria gonorrhoeae DGI2]
gi|291012208|gb|EFE04197.1| DNA mismatch repair protein mutL [Neisseria gonorrhoeae DGI2]
Length = 658
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 162/397 (40%), Gaps = 62/397 (15%)
Query: 1 MKLVNEVYHQ-FNNHQYPFIILNIEMSRDSVDVNVTPDKRQI-FMDH---EKLLLATVKV 55
+ V + Y +N P +L +E+ ++VDVNV P K +I F D +L+ T+
Sbjct: 264 LHAVKQAYRDVLHNALTPAFVLFLELPPEAVDVNVHPTKTEIRFRDSRQVHQLVFHTLNK 323
Query: 56 HITDSYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETI-----PVPSEDNS 110
+ D+ A N+ +S+ SN+ EV H+ P+PSE++S
Sbjct: 324 ALADTRA--------NLTESV---------------SNAGEVLHDITGVTPAPMPSENDS 360
Query: 111 N--FSHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARY 168
F +N P +PDT + P + R +LSL + + Y
Sbjct: 361 ENLFDSASN---HPTGNKPDTRNAFGSSGKTAPMPYQAARAPQQHSLSLRESRAAMDT-Y 416
Query: 169 ARRTVQAQDRCVE------NRFHANIDPSKNKEAESELNRVI-KKSMFEKMKIVGQFNLG 221
A + D +E RF + + ++ L+ I +S + LG
Sbjct: 417 AELYKKTDDIDLELSQFEQARFGNMPSETPAHKTDTPLSDGIPSQSELPPLGFAIAQLLG 476
Query: 222 -FIIVKYDSDLFIIDQHATDEKYNFETL----QKTTLIKSQKLVVPQNLHLTKINQCILK 276
+I+ + + L +ID HA E+ N+E + Q+ ++SQ L++P + L
Sbjct: 477 IYILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGNLQSQHLLIPVTFAASHEECAALA 536
Query: 277 DNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDI----EELLFMLQHTNSTEH 332
D+ G E S GN L + LG+ D+ ++L L S++
Sbjct: 537 DHAETLAGFGLEL---SDMGGNTLAVR---AAPVMLGKSDVVSLARDVLGELAQVGSSQT 590
Query: 333 CRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
R + A+ +C S+ GR L++ EM L+R+M
Sbjct: 591 IASHENR-ILATMSCHGSIRAGRRLTLPEMNALLRDM 626
>gi|223997578|ref|XP_002288462.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220975570|gb|EED93898.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 324
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 81/172 (47%), Gaps = 25/172 (14%)
Query: 204 IKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKT---------TLI 254
+ K M +++ Q FI++K + L ++DQHA DE+ + E L++ T+I
Sbjct: 154 LTKDMLANAEVISQVEAKFIVIKANGKLCVVDQHAADERISLEMLERALFNPNLADDTVI 213
Query: 255 KSQKL------------VVP-QNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLL 301
K K V+P + + LT+ + + + K ++F+F+ D +++L
Sbjct: 214 KMTKKKLKVADILKPTQVLPAKRIALTQSQLAAARHHFSLLQK--WKFTFEEPSDKSLIL 271
Query: 302 TSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMI 353
T +P + D + L H E +P+ ++ + AS+ACR ++++
Sbjct: 272 TGVPSVCGRVVNVNDFVAFVKELSHHRGGE-IKPACVKRILASQACRYAIIV 322
>gi|225853787|ref|YP_002735299.1| DNA mismatch repair protein [Streptococcus pneumoniae JJA]
gi|254766179|sp|C1CBX8.1|MUTL_STRZJ RecName: Full=DNA mismatch repair protein MutL
gi|225722823|gb|ACO18676.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae JJA]
Length = 649
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 155/368 (42%), Gaps = 41/368 (11%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMNQ 74
++P +++I + DVNV P K+++ + EK L+A V I +S Q
Sbjct: 280 RFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMALVSEAIANSLK----------EQ 329
Query: 75 SMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPDETI 134
++ P + ++ K N E+VE +P+ ++N+ + E EP P +T
Sbjct: 330 TL--IPDALENLAKSTVRNREKVEQTILPL--KENTLYY---------EKTEPSRPSQT- 375
Query: 135 EVIDDMPRLQGSYRQSTPVTL-SLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKN 193
EV D L + T +LD + K +A R D+ H +D +
Sbjct: 376 EVADYQVELTDEGQDLTLFAKETLDRLTKPAKLHFAERKPANYDQLD----HPELDLASI 431
Query: 194 KEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL 253
+A +L R + S F +++ GQ + ++ + L+IIDQHA E+ +E +++
Sbjct: 432 DKAYDKLERE-EASSFPELEFFGQMHGTYLFAQGRDGLYIIDQHAAQERVKYEEYRESIG 490
Query: 254 ---IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNT 310
Q+L+VP + LK+ +P+ + G + + +L P+
Sbjct: 491 NVDQSQQQLLVPYIFEFPADDALCLKERMPLLEEVGVFLA--EYGENQFILREHPI---- 544
Query: 311 TLGREDIEELLF-MLQHTNSTEHCRPSRIRAMFA-SRACRKSVMIGRALSVGEMTGLVRN 368
+ E+IE ++ M T+ + RA A +C++S+ + L+
Sbjct: 545 WMAEEEIESGIYEMCDMLLLTKEVSIKKYRAELAIMMSCKRSIKANHRIDDHSARQLLYQ 604
Query: 369 MGRIDQPW 376
+ + D P+
Sbjct: 605 LSQCDNPY 612
>gi|385341654|ref|YP_005895525.1| DNA mismatch repair protein MutL [Neisseria meningitidis
M01-240149]
gi|385857499|ref|YP_005904011.1| DNA mismatch repair protein MutL [Neisseria meningitidis NZ-05/33]
gi|325201860|gb|ADY97314.1| DNA mismatch repair protein MutL [Neisseria meningitidis
M01-240149]
gi|325208388|gb|ADZ03840.1| DNA mismatch repair protein MutL [Neisseria meningitidis NZ-05/33]
Length = 658
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 170/399 (42%), Gaps = 66/399 (16%)
Query: 1 MKLVNEVYHQ-FNNHQYPFIILNIEMSRDSVDVNVTPDKRQI-FMDHEK---LLLATVKV 55
+ V + Y +N P +L +++ ++VDVNV P K +I F D + L+ T+
Sbjct: 264 LHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSRQVHQLVFHTLNK 323
Query: 56 HITDSYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETI-----PVPSEDNS 110
+ D+ A ++ +S+ SN+ EV H+ P+PSE++S
Sbjct: 324 ALADTRA--------DLTESV---------------SNAGEVLHDITGVTPAPMPSENDS 360
Query: 111 -NFSHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYA 169
N A+ P +PDT + P + R +LSL + + YA
Sbjct: 361 ENLFDSAS--DYPTGNKPDTRNAFGASGKTAPMPYQAARAPQQHSLSLRESRAAMNT-YA 417
Query: 170 RRTVQAQD------RCVENRFHANIDPSKNKEAESEL---NRVIKKSMFEKMKIVGQFNL 220
+ D R + RF N+ PS+ +++ + + +S + L
Sbjct: 418 ELYKKTDDIDLELSRLEQARF-GNM-PSETPAPQTDTPLSDGIPSQSELPPLGFAIAQLL 475
Query: 221 G-FIIVKYDSDLFIIDQHATDEKYNFETL----QKTTLIKSQKLVVPQNLHLTKINQCIL 275
G +I+ + + L +ID HA E+ N+E + Q+ ++SQ+L++P + L
Sbjct: 476 GIYILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGKLQSQRLLIPVTFATSHEECAAL 535
Query: 276 KDNLPVFYKNGFEFSFDSSDDGNVL-LTSLPMSKNTTLGREDI----EELLFMLQHTNST 330
D+ G E S GN L + ++P LG+ D+ +++L L S+
Sbjct: 536 SDHADALAGFGLEL---SDMGGNTLAVRAVP----AMLGKADVVSLAKDVLSELAQVGSS 588
Query: 331 EHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
+ R + A+ +C S+ GR L++ EM L+R+M
Sbjct: 589 QTIEEHENR-ILATMSCHGSIRAGRRLTLPEMNALLRDM 626
>gi|220932003|ref|YP_002508911.1| DNA mismatch repair protein MutL [Halothermothrix orenii H 168]
gi|254766169|sp|B8CX97.1|MUTL_HALOH RecName: Full=DNA mismatch repair protein MutL
gi|219993313|gb|ACL69916.1| DNA mismatch repair protein MutL [Halothermothrix orenii H 168]
Length = 644
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 83/381 (21%), Positives = 168/381 (44%), Gaps = 61/381 (16%)
Query: 16 YPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMNQS 75
YP + LN++++ VDVNV P K+++ +K++ ++ +G N+ S
Sbjct: 281 YPVVFLNLKLNPILVDVNVHPTKKEVKFSRDKVIKEVIQ-------------NGINIELS 327
Query: 76 -MEQDPSSDVDMEKIQRSN--SEEVEHETIPVP--SEDNSNFSHEANLQQSPETVEPDTP 130
+++ P ++ + R + ++ E++ I +P E +N S +A + ++ + D+
Sbjct: 328 KLDKSPRLKRNINPLNRDDKTKDKSEYQKIKLPEDKEQITNKSSDAGILKNQNPL--DSQ 385
Query: 131 DETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHA---- 186
D + +P + + +S + D + D +++ +
Sbjct: 386 DSIL-----LPSKKNGFYSKKNSQVSQNKFMD---INNKLEKTEINDNYKKDKHYKTDSI 437
Query: 187 NIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFE 246
NI + KE +++++ IK +++GQ +II + L+IIDQH E+ ++
Sbjct: 438 NIKDNSIKENKNKMDIPIK-------RVLGQIKNTYIIAEGRDGLYIIDQHNAHERILYQ 490
Query: 247 TL---QKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFE---FSFDSSDDGNVL 300
+ + I SQ LVVP N+ T +LK LP K GF+ F +S +
Sbjct: 491 SFIEKYNNSEIVSQPLVVPVNIETTAPEAEVLKSYLPQLEKMGFKLEVFGINS-----FI 545
Query: 301 LTSLP----MSKNTTLGREDIEELLFMLQHTNSTEHCRPSR-IRAMFASRACRKSVMIGR 355
+ +P N + RE I++L L+H + +PS I + + +CR ++ G
Sbjct: 546 VREVPSLIKKRSNKRVVREVIDKL---LEHDKA---MKPSELINEIISYMSCRGAIKAGE 599
Query: 356 ALSVGEMTGLVRNMGRIDQPW 376
L E ++ + + D P+
Sbjct: 600 YLDKKEAEQIIEGLFKTDNPY 620
>gi|379795663|ref|YP_005325661.1| DNA mismatch repair protein MutL [Staphylococcus aureus subsp.
aureus MSHR1132]
gi|356872653|emb|CCE58992.1| DNA mismatch repair protein MutL [Staphylococcus aureus subsp.
aureus MSHR1132]
Length = 668
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 91/412 (22%), Positives = 173/412 (41%), Gaps = 70/412 (16%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K + E YH ++P +NIEM VDVNV P K ++ + E+ L + I ++
Sbjct: 265 KAILEGYHTLLTIGRFPICYINIEMDPILVDVNVHPTKLEVRLSKEEQLYRLIVNKIQEA 324
Query: 61 YAIGFTVDGNNMN---------QSMEQDP--------------SSDVDMEKIQRSNSEEV 97
+ + NN++ QS EQ SD+ +++NSE+V
Sbjct: 325 FKDRILIPKNNLDNVPKKNKVLQSFEQQKIEFEQRQKGNETQDKSDI----FEKNNSEQV 380
Query: 98 EHETIPVPSEDNSNFSHEANLQQSPETVEPD---TPDETIEVIDDMPRLQGSYRQSTPVT 154
+ ET S+ N +++ + S +E D + T E +D + Q Q
Sbjct: 381 KQETKFHVSDSNDDYNPFVT-KTSESLIEEDEVGAYNNTREKDEDYFKKQQEILQQM--- 436
Query: 155 LSLDIIQDQLKARYARRTVQAQDRCVENRFH--ANIDPSKNKEAESELNRVIKKSMFEKM 212
DQ R + Q+ + N ++ ++I +K+K+ K M
Sbjct: 437 -------DQTSERQEESSEQSFENYSPNDYYDASDIKGTKSKDP---------KRRIPYM 480
Query: 213 KIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKT---TLIKSQKLVVPQNLHLTK 269
+IVGQ + +II + + +++IDQHA E+ +E + + Q L++P H +K
Sbjct: 481 EIVGQVHGTYIIAQNEFGMYMIDQHAAQERIKYEYFRDKIGEVTNEVQDLLIPLTFHFSK 540
Query: 270 INQCILKDNLPVFYKNGFE---FSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLF-MLQ 325
Q I+ YKN + + + +++S P+ ++++EE++ M++
Sbjct: 541 DEQLIIDQ-----YKNELQRVGIVLEHFGGHDYIVSSYPV----WFPKDEVEEIIKDMIE 591
Query: 326 HTNSTEHCRPSRIRAMFA-SRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+ ++R A +C+KS+ L EM+ L+ + + P+
Sbjct: 592 LILEEKKVDIKKLREEVAIMMSCKKSIKANHYLQKNEMSDLIDQLREAEDPF 643
>gi|322371529|ref|ZP_08046075.1| DNA mismatch repair protein MutL [Haladaptatus paucihalophilus
DX253]
gi|320548820|gb|EFW90488.1| DNA mismatch repair protein MutL [Haladaptatus paucihalophilus
DX253]
Length = 734
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 87/207 (42%), Gaps = 16/207 (7%)
Query: 181 ENRFHANIDPSKNKEAESELNRVIKKSMFEK---MKIVGQFNLGFIIVKYDSDLFIIDQH 237
E +F A + E E + ++ FE+ M+I+GQ + +++ + D L +IDQH
Sbjct: 501 ERKFSAPTATTTLPETGGEGAKEADEASFERLPSMRILGQLHDTYVVAETDDGLVLIDQH 560
Query: 238 ATDEKYNFETL--QKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSD 295
A DE+ N+E L Q +Q L L LT + D + GF + D
Sbjct: 561 AADERVNYERLCRQFAGDTTTQVLASSVELELTAAEAALFDDYREALARLGFHAAL--VD 618
Query: 296 DGNVLLTSLPMSKNTTLGREDIEELLFML-----QHTNSTEHCRPSRIRAMFASRACRKS 350
D V +T++P TL + + ++L NS E I + AC S
Sbjct: 619 DRTVEVTTVPAVFEKTLSPDLLRDVLSEFISVESGGANSAEAVADELISDL----ACYPS 674
Query: 351 VMIGRALSVGEMTGLVRNMGRIDQPWV 377
+ +L G++ L+ + + P+
Sbjct: 675 ITGNTSLREGDVVSLLAALDECENPYA 701
>gi|445450530|ref|ZP_21444523.1| DNA mismatch repair protein, C-terminal domain protein
[Acinetobacter baumannii WC-A-92]
gi|444755841|gb|ELW80409.1| DNA mismatch repair protein, C-terminal domain protein
[Acinetobacter baumannii WC-A-92]
Length = 650
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 78/371 (21%), Positives = 149/371 (40%), Gaps = 52/371 (14%)
Query: 11 FNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGN 70
+ HQ+ +L +E+ +++DVNV P K +I +++ + V+ + ++ A F
Sbjct: 288 LHGHQHSSYLLFLEVDPENIDVNVHPTKHEIRFLNQREVHEFVRHYAKETLA-QFQTASA 346
Query: 71 NMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTP 130
++ Q+M+ D D N S +Q P+ E T
Sbjct: 347 DLAQAMKVD----------------------------DTQNLS----VQPQPKYQEQFTL 374
Query: 131 DETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRC-VENRFHANID 189
T + +D Y+ ST + + + Q YA +T + + N +
Sbjct: 375 HRTAQAVDTTVDKPNGYQPSTELLTDFNNSRPQ-AVHYAEQTPKYNGSAQLNNALKTYLA 433
Query: 190 PSKNKEA----ESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNF 245
P +++ A + + V K F + Q + +I+ + L I+D HA E+
Sbjct: 434 PLRDQPANFSVDENIEPVAKVDEFPLGIAIAQLHGIYILAQNTEGLIIVDMHAAHERILL 493
Query: 246 ETLQ----KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLL 301
+ ++ K SQ+L++P+ + ++++ ++D P + G E D D V++
Sbjct: 494 QQMKNAWDKPEFWTSQQLLIPKVISISRMQAVRVEDLKPQLERLGLE--IDLYGDEQVIV 551
Query: 302 TSLPMSKNTTLGREDIEELLFMLQH---TNSTEHCRPSRIRAMFASRACRKSVMIGRALS 358
+P L + D E L+ L + N + + A AC +V R LS
Sbjct: 552 RGVP----AILQKADFENLIPELLNDLDPNDEAQALLQKRDELLAGMACHGAVRAHRQLS 607
Query: 359 VGEMTGLVRNM 369
+ EM L+R M
Sbjct: 608 LSEMNALLRQM 618
>gi|433522164|ref|ZP_20478851.1| DNA mismatch repair protein mutL [Neisseria meningitidis 61103]
gi|432258542|gb|ELL13824.1| DNA mismatch repair protein mutL [Neisseria meningitidis 61103]
Length = 658
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 166/398 (41%), Gaps = 64/398 (16%)
Query: 1 MKLVNEVYHQ-FNNHQYPFIILNIEMSRDSVDVNVTPDKRQI-FMDHEK---LLLATVKV 55
+ V + Y +N P +L I++ ++VDVNV P K +I F D ++ L+ T+
Sbjct: 264 LHAVKQAYRDVLHNALTPAFVLFIDLPPEAVDVNVHPTKTEIRFRDSQQVHQLVFHTLNK 323
Query: 56 HITDSYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETI-----PVPSEDNS 110
+ D+ A ++ +S+ N+ EV HE P+PSE++S
Sbjct: 324 ALADTRA--------DLTESV---------------GNAGEVLHEITGVTPAPMPSENDS 360
Query: 111 -NFSHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYA 169
N + A+ P +PDT + P + R +LSL + + YA
Sbjct: 361 ENLFNRAS--DYPTGNKPDTRNAFGASGKTAPMPYQAARAPQQRSLSLRESRAAMNT-YA 417
Query: 170 RRTVQAQD------RCVENRFHANIDPSKNKEAESEL---NRVIKKSMFEKMKIVGQFNL 220
+ D R + RF N+ PS+ +++ + + +S + L
Sbjct: 418 ELYKKTDDIDLELSRFEQARF-GNM-PSETPAPQTDTPLSDGIPSQSELPPLGFAIAQLL 475
Query: 221 G-FIIVKYDSDLFIIDQHATDEKYNFETL----QKTTLIKSQKLVVPQNLHLTKINQCIL 275
G +I+ + + L +ID HA E+ N+E + Q+ ++SQ+L++P + L
Sbjct: 476 GIYILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGRLQSQRLLIPVTFAASHEECAAL 535
Query: 276 KDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDI----EELLFMLQHTNSTE 331
D G E S GN L + LG+ D+ ++L L S++
Sbjct: 536 ADYAETLAGFGLEL---SDMGGNTLAVR---AAPAMLGKSDVVSLARDVLGELAQVGSSQ 589
Query: 332 HCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
R + A+ +C S+ GR L++ EM L+R+M
Sbjct: 590 TIEEHENR-ILATMSCHGSIRAGRRLTLPEMNVLLRDM 626
>gi|298676065|ref|YP_003727815.1| DNA mismatch repair protein MutL [Methanohalobium evestigatum
Z-7303]
gi|298289053|gb|ADI75019.1| DNA mismatch repair protein MutL [Methanohalobium evestigatum
Z-7303]
Length = 626
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 73/378 (19%), Positives = 157/378 (41%), Gaps = 63/378 (16%)
Query: 8 YHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTV 67
Y +YP +LNI+++ + VD+NV P K + + HE+ ++ + + A+G
Sbjct: 275 YTLLPKGRYPAAVLNIQINPEEVDINVHPRKSHVRLSHEQDIMDAISESVKT--ALG--- 329
Query: 68 DGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEP 127
+ E IP ++ ++ S E ++Q + + V
Sbjct: 330 ------------------------------QAELIPSVNKKENDKSQETSVQLNIKEVGN 359
Query: 128 DTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHAN 187
+ +I + P Y+ S + LK+ +++ ++ ++
Sbjct: 360 KSQVSKDNIIREKP---AEYKTSKTGE------KKHLKSATNVSSIKDTEKRLKRSERLT 410
Query: 188 IDPSKNKEAE--SELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNF 245
++NKE++ + + + +S +K++GQ + +I+ + DS L +IDQHA E+ +
Sbjct: 411 TAENENKESQIPKQSSGIQLQSESSNIKVLGQVDELYIVAEMDSRLVLIDQHAAHERIMY 470
Query: 246 ETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLP 305
E ++ + Q+L+ P L L+ + ++++ +P Y F F+ ++TS+P
Sbjct: 471 EHIRNSKNPDWQELISPITLELSIKEKVLMEEYIP--YLEEFGFAISEFGPSTYIITSVP 528
Query: 306 MSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIR-------AMFASRACRKSVMIGRALS 358
+ G + + L H +E RI+ M + ACR ++ G +
Sbjct: 529 V----IFGNIEKPDTL----HDMISEILSAGRIKNDVGIYDYMCKTIACRSAIKAGHICN 580
Query: 359 VGEMTGLVRNMGRIDQPW 376
+M L+ + P+
Sbjct: 581 TEQMENLIVQLKNTQNPY 598
>gi|292656068|ref|YP_003535965.1| DNA mismatch repair protein MutL [Haloferax volcanii DS2]
gi|448290060|ref|ZP_21481216.1| DNA mismatch repair protein MutL [Haloferax volcanii DS2]
gi|291371246|gb|ADE03473.1| DNA mismatch repair protein mutL [Haloferax volcanii DS2]
gi|445580452|gb|ELY34831.1| DNA mismatch repair protein MutL [Haloferax volcanii DS2]
Length = 563
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 85/186 (45%), Gaps = 12/186 (6%)
Query: 197 ESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQ---KTTL 253
+S L V S+F+ ++++G+F +++ + D +L ++DQHA E+ N+E L+ ++
Sbjct: 355 DSSLAPVEAASVFDDLRVIGRFRGLYLLCEADDELLVVDQHAAHERINYERLREAVESAG 414
Query: 254 IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEF--SFDSSDDGNVLLTSLPMSKNTT 311
I S + P + L+ + +L N K GF + G + ++P
Sbjct: 415 IDSAAVDPPATVSLSPADAALLDANRDPVEKLGFRVVEFGEGGGTGTYRVEAVP----AP 470
Query: 312 LGREDIEELLF-MLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMG 370
LGR + L ++ S +H P + AC S+ G L+ E T LV +G
Sbjct: 471 LGRPFAPDALADVVADVASGDHADPR--DELLKDLACHPSIKAGDDLTDDEATRLVERLG 528
Query: 371 RIDQPW 376
+ P+
Sbjct: 529 SCETPY 534
>gi|448390494|ref|ZP_21566117.1| DNA mismatch repair protein MutL [Haloterrigena salina JCM 13891]
gi|445666908|gb|ELZ19560.1| DNA mismatch repair protein MutL [Haloterrigena salina JCM 13891]
Length = 743
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 76/171 (44%), Gaps = 6/171 (3%)
Query: 211 KMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL--IKSQKLVVPQNLHLT 268
++++GQ + +++ + D L +IDQHA DE+ N+E LQ+ +Q L P L LT
Sbjct: 546 ALRVLGQLDDTYLVCETDDGLVLIDQHAADERVNYERLQRAFADDPAAQALAEPVELELT 605
Query: 269 KINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELL--FMLQH 326
+ + G F D +DD V +T++P + TL E + ++L F+
Sbjct: 606 AAEAEAFEGYREALSRLG--FYADRTDDRTVAVTTVPAVFDETLEPERLRDVLASFVEGD 663
Query: 327 TNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPWV 377
+ + AC S+ +L+ G + L+ + + P+
Sbjct: 664 REAGAETVDALADEFLGDLACYPSITGNTSLTEGSVVDLLEALDDCENPYA 714
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 10 QFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMD 44
Q +YPF+ L +E+ ++VDVNV P KR++ D
Sbjct: 290 QLGGDRYPFVTLFLEVPGEAVDVNVHPRKREVRFD 324
>gi|198437487|ref|XP_002125934.1| PREDICTED: similar to DNA mismatch repair protein Mlh3 (MutL
protein homolog 3) [Ciona intestinalis]
Length = 692
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 90/194 (46%), Gaps = 23/194 (11%)
Query: 204 IKKSMFEKMKIVGQFNLGFIIVKYDSD------LFIIDQHATDEKYNFETL-------QK 250
+ K + K+K++GQF FI L ++DQHA E+ E+ K
Sbjct: 464 LTKEVLTKLKVIGQFGNKFIACSVGCTTDSRGMLLLVDQHAAHERVRLESFISDAYESSK 523
Query: 251 TTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFD-SSDDGNVLLTSLPMSKN 309
+K+ KL ++LTK ++++ VFY G F D +++D V + S+P S
Sbjct: 524 RINLKTSKLESKVEINLTKTQTAAVRNHPEVFYTCGLRFDSDLNTEDDLVTVNSIP-SLL 582
Query: 310 TTLG--REDIEELL-----FMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEM 362
TT G +E IE L+ + + ++ P + + S+AC ++ G L++ +
Sbjct: 583 TTSGTLKETIENLIEERTQALYVNRGVSDSMSPVLFQ-LLCSKACHGAIRFGDPLALEQC 641
Query: 363 TGLVRNMGRIDQPW 376
T L+ + + D P+
Sbjct: 642 TELLTALSKCDFPF 655
>gi|445430118|ref|ZP_21438446.1| DNA mismatch repair protein, C-terminal domain protein
[Acinetobacter baumannii OIFC021]
gi|444760845|gb|ELW85275.1| DNA mismatch repair protein, C-terminal domain protein
[Acinetobacter baumannii OIFC021]
Length = 651
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 77/371 (20%), Positives = 153/371 (41%), Gaps = 51/371 (13%)
Query: 11 FNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGN 70
+ HQ+ +L +E+ +++DVNV P K +I +++ + V+ + ++ A F
Sbjct: 288 LHGHQHSSYLLFLEVDPENIDVNVHPTKHEIRFLNQREVHEFVRHYAKETLA-QFQTASA 346
Query: 71 NMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPV--PSEDNSNFSHEANLQQSPETVEP- 127
++ Q+M+ D + ++ ++ + + H T + D N S Q S E +
Sbjct: 347 DLAQAMKVDDTQNLSVQPQPKYQEQFTLHRTEQAVDTTLDKPNSS-----QPSTELLTDF 401
Query: 128 -DTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHA 186
++ + + + P+ GS + + + L ++DQ
Sbjct: 402 NNSRPQAVHYAEQTPKYNGSAQLNNALKTYLAPLRDQ----------------------- 438
Query: 187 NIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFE 246
P+ N + + V K F + Q + +I+ + L I+D HA E+ +
Sbjct: 439 ---PATNFTVDENVEPVAKVDEFPLGIAIAQLHGIYILAQNTEGLIIVDMHAAHERILLQ 495
Query: 247 TLQ----KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLT 302
++ K SQ+L++P+ + ++++ ++D P + G E D D V++
Sbjct: 496 QMKNAWDKPEFWTSQQLLIPKVISISRMQAVRVEDLKPQLERLGLE--IDLYGDEQVIVR 553
Query: 303 SLPMSKNTTLGREDIE----ELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALS 358
+P L + D E ELL L + + R + A AC +V R LS
Sbjct: 554 GVP----AILQKADFENLIPELLNDLDPNDEAQGLLQKR-DELLAGMACHGAVRAHRQLS 608
Query: 359 VGEMTGLVRNM 369
+ EM L+R M
Sbjct: 609 LSEMNALLRQM 619
>gi|448726241|ref|ZP_21708651.1| DNA mismatch repair protein MutL [Halococcus morrhuae DSM 1307]
gi|445795859|gb|EMA46379.1| DNA mismatch repair protein MutL [Halococcus morrhuae DSM 1307]
Length = 728
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 85/396 (21%), Positives = 156/396 (39%), Gaps = 41/396 (10%)
Query: 3 LVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY- 61
+V Q +YPF ++ + + ++VDVNV P K++I E+ + V+ + ++
Sbjct: 317 IVKAYGGQLATDRYPFAVVFLSVPPNTVDVNVHPRKQEIRFADEETVREQVETTVENALL 376
Query: 62 AIGFTVDGNNMNQSMEQ----DPSSDVDMEKIQRSNSEEV---------EHETIPVPSED 108
G G +S + DP S D Q + +E +ET P
Sbjct: 377 EAGLVRSGAPRGRSAPEQTAIDPHSTDDGANEQETTDQETNDARADGTTANETEP----- 431
Query: 109 NSNFSHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARY 168
++ + A+ S T EP + DD P + + P T + + ++R
Sbjct: 432 -ADPASAADPIGSTSTAEPAS-------RDDEPVGEQQAEPTEP-TEPGETSESVERSRS 482
Query: 169 ARRTV--QAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFE---KMKIVGQFNLGFI 223
RT A + E R + E+ V + FE +++++GQ + +
Sbjct: 483 PERTTDGAANEAGTEGRKFTETPAQATLDGET----VADEPDFEQLPRLRVLGQLHDTYF 538
Query: 224 IVKYDSDLFIIDQHATDEKYNFETLQKTTLIKS--QKLVVPQNLHLTKINQCILKDNLPV 281
+ + L ++DQHA E+ N+E L+K ++ Q+L P + LT + ++
Sbjct: 539 VCESPDGLVLVDQHAAHERVNYERLRKRVAGETNIQELAEPVTIELTAAESALFEEFTEA 598
Query: 282 FYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAM 341
GF S SD V + ++P E + + L + A+
Sbjct: 599 LSALGFRAS--PSDGRAVEVAAVPAVLAGAADPELLRDALSAFVDERDPDEPITQVSDAL 656
Query: 342 FASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPWV 377
A AC S+ +LS G +T L+R + + P+
Sbjct: 657 LADLACYPSITANTSLSEGSVTELLRALDACENPYA 692
>gi|373450969|ref|ZP_09542909.1| DNA mismatch repair protein mutL [Wolbachia pipientis wAlbB]
gi|371931816|emb|CCE77927.1| DNA mismatch repair protein mutL [Wolbachia pipientis wAlbB]
Length = 609
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 76/154 (49%), Gaps = 14/154 (9%)
Query: 222 FIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQC---ILKDN 278
+II + L I+DQHA E+ +E L++ + IK QKL++P+ + + NQ ++K
Sbjct: 433 YIIAEVRDKLIIVDQHAAHERLVYECLKEKSSIKRQKLLLPEMVEIK--NQAGMEMIKTY 490
Query: 279 LPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLF-MLQHTNSTEHCRP-- 335
++ GFE S + +++ +P LG D + +L ++ E P
Sbjct: 491 KDKLFEMGFEIEIKS--ENKIIVKEVP----AILGTVDTKRMLIDIVDRLTEIEDILPIE 544
Query: 336 SRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
++ + A+ AC S+ GR + + EM L+R M
Sbjct: 545 DKVNKILATIACYGSIRAGRKMKLEEMNELLRQM 578
>gi|268686693|ref|ZP_06153555.1| DNA mismatch repair protein [Neisseria gonorrhoeae SK-93-1035]
gi|268626977|gb|EEZ59377.1| DNA mismatch repair protein [Neisseria gonorrhoeae SK-93-1035]
Length = 654
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 93/403 (23%), Positives = 163/403 (40%), Gaps = 78/403 (19%)
Query: 1 MKLVNEVYHQ-FNNHQYPFIILNIEMSRDSVDVNVTPDKRQI-FMDH---EKLLLATVKV 55
+ V + Y +N P +L +++ ++VDVNV P K +I F D +L+ T+
Sbjct: 264 LHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSRQVHQLVFHTLNK 323
Query: 56 HITDSYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETI-----PVPSEDNS 110
+ D+ A N+ +S+ SN+ EV H+ P+PSE++S
Sbjct: 324 ALADTRA--------NLTESV---------------SNAGEVLHDITGVTPAPMPSENDS 360
Query: 111 N--FSHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDII--QDQLKA 166
F +N P +PDT + GS ++ P+ Q L
Sbjct: 361 ENLFDSASN---HPTGNKPDTRNAF-----------GSSGKTAPMPYQAARAPQQHSLSL 406
Query: 167 RYARRTVQAQDRCVENRFHANIDPSK-------NKEAESELNRVI----KKSMFEKMKIV 215
R +R + + + +++ S+ N +ES N V + S +
Sbjct: 407 RESRAAMDTYAELYKKTDNIDLELSQFEQARFGNMPSESSTNNVSDGIGQASELPPLGFA 466
Query: 216 GQFNLG-FIIVKYDSDLFIIDQHATDEKYNFETL----QKTTLIKSQKLVVPQNLHLTKI 270
LG +I+ + + L +ID HA E+ N+E + Q+ ++SQ L++P +
Sbjct: 467 IAQLLGIYILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGNLQSQHLLIPVTFAASHE 526
Query: 271 NQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDI----EELLFMLQH 326
L D+ G E S GN L + LG+ D+ ++L L
Sbjct: 527 ECAALADHAETLAGFGLEL---SDMGGNTLAVR---AAPVMLGKSDVVSLARDVLGELAQ 580
Query: 327 TNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
S++ R + A+ +C S+ GR L++ EM L+R+M
Sbjct: 581 VGSSQTIASHENR-ILATMSCHGSIRAGRRLTLPEMNALLRDM 622
>gi|421565749|ref|ZP_16011519.1| DNA mismatch repair protein mutL [Neisseria meningitidis NM3081]
gi|402343326|gb|EJU78475.1| DNA mismatch repair protein mutL [Neisseria meningitidis NM3081]
Length = 658
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 93/396 (23%), Positives = 164/396 (41%), Gaps = 60/396 (15%)
Query: 1 MKLVNEVYHQ-FNNHQYPFIILNIEMSRDSVDVNVTPDKRQI-FMDHEK---LLLATVKV 55
+ V + Y +N P +L +++ ++VDVNV P K +I F D + L+ T+
Sbjct: 264 LHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSRQVHQLVFHTLNK 323
Query: 56 HITDSYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETI-----PVPSEDNS 110
+ D+ A ++ +S+ SN+ EV H+ P+PSE+NS
Sbjct: 324 ALADTRA--------DLTESV---------------SNAGEVLHDITGVTPAPMPSENNS 360
Query: 111 NFSHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYAR 170
+ + P +PDT + P + R +LSL + + YA
Sbjct: 361 ENLFD-RVSDYPTGNKPDTRNAFGASGKTTPMPYQAARAPQQRSLSLRESRAAMNT-YAE 418
Query: 171 RTVQAQDRCVE------NRFHANIDPSKNKEAESELNRVI-KKSMFEKMKIVGQFNLG-F 222
+ D +E RF + + ++ L+ I +S + LG +
Sbjct: 419 LYKKTDDIDLELIQFEQARFGNMPSETPTPQTDTPLSDGIPSQSELPPLGFAIAQLLGIY 478
Query: 223 IIVKYDSDLFIIDQHATDEKYNFETL----QKTTLIKSQKLVVPQNLHLTKINQCILKDN 278
I+ + + L +ID HA E+ N+E + Q+ ++SQ+L++P + L D
Sbjct: 479 ILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGKLQSQRLLIPVTFAASHEECAALADY 538
Query: 279 LPVFYKNGFEFSFDSSDDGNVL-LTSLPMSKNTTLGREDI----EELLFMLQHTNSTEHC 333
G E S GN L + ++P LG+ DI ++L L S++
Sbjct: 539 AETLAGFGLEL---SDMGGNTLAVRAVP----AMLGKSDIVSLARDVLGELAQVGSSQTI 591
Query: 334 RPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
R + A+ +C S+ GR L++ EM L+R+M
Sbjct: 592 EEHENR-ILATMSCHGSIRAGRRLTLPEMNALLRDM 626
>gi|325191795|emb|CCA25619.1| hypothetical protein PITG_07252 [Albugo laibachii Nc14]
Length = 771
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 93/203 (45%), Gaps = 29/203 (14%)
Query: 202 RVIKKSMFEKMKIVGQFNLGFIIVK-----YDSDLFII---DQHATDEKYNFETLQKTTL 253
R + KS+F+++ ++GQ + FI+ +++D+ +I DQHA DE+ E L+KT L
Sbjct: 549 RKVSKSIFDRLFVLGQVDKKFILASTRLRVHNADVCMIVAFDQHAVDERIKLEKLEKTLL 608
Query: 254 -IKSQKLVVPQNLHLTKINQCILKDN---LPVFYKN----GFEF---SFDSS-------- 294
+ + + + H + + L V+ K GF F S D S
Sbjct: 609 GLSGTERNIERYHHCPGLKLWMNAQEDRALHVYEKTLDDWGFYFERISHDKSKYRMKESI 668
Query: 295 DDGNVLLTSLPMSKNTTLGREDIEELL-FMLQHTNSTEHCRPSRIRAMFASRACRKSVMI 353
D +++L + P D E + ++L+ +TE P I + SRACR ++M
Sbjct: 669 DGTSLILKTSPKFDGRVATETDFREFVNYLLEEYATTEQI-PPMISRLIKSRACRSAIMF 727
Query: 354 GRALSVGEMTGLVRNMGRIDQPW 376
G LS E L+ ++ R P+
Sbjct: 728 GEWLSHAECQRLLSDLSRCSLPF 750
>gi|402312100|ref|ZP_10831030.1| DNA mismatch repair protein, C-terminal domain protein
[Lachnospiraceae bacterium ICM7]
gi|400370761|gb|EJP23743.1| DNA mismatch repair protein, C-terminal domain protein
[Lachnospiraceae bacterium ICM7]
Length = 660
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 89/395 (22%), Positives = 167/395 (42%), Gaps = 68/395 (17%)
Query: 14 HQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTV------ 67
HQYPF L+ + + VDVNV P K ++ + K + + + + ++
Sbjct: 277 HQYPFCALSFYL--EGVDVNVHPRKMEVRFSDGNHIYNCTKEAVEEIFKLQSSIREVPVG 334
Query: 68 -DGNNMNQSMEQDPS------SDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQ 120
N + P D++ +K + ++S+E++ TIP SN++ E +
Sbjct: 335 KAAANEKKVFTNTPEPFENRRRDIESQKPKDNSSDEIQW-TIP----KESNYNPENDYAL 389
Query: 121 SPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDR-- 178
+ + D+ DE+ Y + + SL+ + + + A DR
Sbjct: 390 LKDDISRDSSDES------------KYYKGSNALYSLN---NNIASLVDDEKTPAMDREQ 434
Query: 179 -CVENRFHANIDPSKNKEAESELNRVIKKSMFEK-----MKIVGQFNLGFIIVKYDSDLF 232
++N NID + + N+ + S F+ +K++GQ + IV+ +++++
Sbjct: 435 EFLDNSNAVNIDTEETLVGQK--NKASQLSFFDTEAKKYIKVIGQVFDTYWIVQLENEMY 492
Query: 233 IIDQHATDEKYNFETLQKTTL---IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGF-- 287
IIDQHA EK +E L K + I +Q + P + LT + Q +L ++ F GF
Sbjct: 493 IIDQHAAHEKVMYERLLKESRDNKISAQMINPPIIVTLTDLEQDVLNKHMDEFKAAGFDI 552
Query: 288 -EFSFDSSDDGNV--LLTSLPMSKNTTLGREDIEELLF--MLQHTNSTEHCRPSR-IRAM 341
EF ++ + S+P ++ LF ML + + + PS I A
Sbjct: 553 EEFGGKEYKINSIPNIFPSIPKAE------------LFNEMLADSTNYDIISPSELILAK 600
Query: 342 FASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
AS AC+ ++ +S+ E L + +D P+
Sbjct: 601 TASMACKAAIKGNMRISLVEANDLFDELLSLDNPY 635
>gi|417963432|ref|ZP_12605387.1| MutL [Candidatus Arthromitus sp. SFB-3]
gi|380332976|gb|EIA23654.1| MutL [Candidatus Arthromitus sp. SFB-3]
Length = 380
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 69/368 (18%), Positives = 154/368 (41%), Gaps = 65/368 (17%)
Query: 14 HQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMN 73
++YPF I + + +DVN+ P K +I + E+++ Y+ + N +N
Sbjct: 49 NKYPFFITFLNIDPKDIDVNIHPTKAEIKFEDERMI-----------YSFLYKTYANELN 97
Query: 74 QSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPDET 133
+ SNS V+ I N L S + V P + +E
Sbjct: 98 DCL---------------SNSTLVKKNDITGIITSNDKL-----LSLSKKNVSPFSKEEL 137
Query: 134 IEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKN 193
++D +L + TL D++ ++ F N N
Sbjct: 138 QRLMDKRDKLDSYNTNNKIETLPYDLVNNE-------------------EFDKNHFEELN 178
Query: 194 KEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFE----TLQ 249
+ + E ++ + +I+GQ+N +II ++ + +IIDQH EK FE ++
Sbjct: 179 ENLKFE---ILNNTQTSDFRIIGQYNKTYIIGEWYDNFYIIDQHVAHEKILFEEFINKIK 235
Query: 250 KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKN 309
++K ++++P +HL +++ ++N F G F+ ++ D ++++ +P
Sbjct: 236 NGNILK--QVIIPSIVHLNELSYSTYQNNKHYFDNCG--FTIETFGDNSIIIREVPFEFR 291
Query: 310 TTLGREDIEELLFMLQHTNSTEHCRPSRIRA-MFASRACRKSVMIGRALSVGEMTGLVRN 368
+ I L ++Q+ ++ + ++ + A++AC+ ++ L+ E+ L+
Sbjct: 292 DCDAKSLI---LDIIQNIDNFGSGTLAEVKYDLIATKACKNAIKANCILNDQEIKILISK 348
Query: 369 MGRIDQPW 376
+ +++ P+
Sbjct: 349 LMKLENPF 356
>gi|149200821|ref|ZP_01877796.1| DNA mismatch repair protein [Roseovarius sp. TM1035]
gi|149145154|gb|EDM33180.1| DNA mismatch repair protein [Roseovarius sp. TM1035]
Length = 611
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 75/153 (49%), Gaps = 6/153 (3%)
Query: 222 FIIVKYDSDLFIIDQHATDEKYNFETLQKT---TLIKSQKLVVPQNLHLTKINQCILKDN 278
+II + ++ + I+DQHA E+ +E L++ + I +Q L++P+ + L++ + +L D+
Sbjct: 433 YIIAQTETGMVIVDQHAAHERLVYERLKRQMAESGIAAQALLIPEIVDLSEADCALLMDH 492
Query: 279 LPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRI 338
G + G++ + P T + ++L LQ ++ + RI
Sbjct: 493 AEEL--AGMGLGIEPFGSGSLAVRETPAILGTVNAGALLRDILDELQDQGASGTLK-LRI 549
Query: 339 RAMFASRACRKSVMIGRALSVGEMTGLVRNMGR 371
A+ + AC SV GR +S EM L+R M R
Sbjct: 550 DAILSRVACHGSVRSGRRMSADEMNALLREMER 582
>gi|194098697|ref|YP_002001759.1| DNA mismatch repair protein [Neisseria gonorrhoeae NCCP11945]
gi|254493793|ref|ZP_05106964.1| DNA mismatch repair protein [Neisseria gonorrhoeae 1291]
gi|268594850|ref|ZP_06129017.1| DNA mismatch repair protein mutL [Neisseria gonorrhoeae 35/02]
gi|268596770|ref|ZP_06130937.1| DNA mismatch repair protein mutL [Neisseria gonorrhoeae FA19]
gi|268599068|ref|ZP_06133235.1| DNA mismatch repair protein [Neisseria gonorrhoeae MS11]
gi|385335752|ref|YP_005889699.1| DNA mismatch repair protein [Neisseria gonorrhoeae TCDC-NG08107]
gi|238690209|sp|B4RLX4.1|MUTL_NEIG2 RecName: Full=DNA mismatch repair protein MutL
gi|193933987|gb|ACF29811.1| DNA mismatch repair protein [Neisseria gonorrhoeae NCCP11945]
gi|226512833|gb|EEH62178.1| DNA mismatch repair protein [Neisseria gonorrhoeae 1291]
gi|268548239|gb|EEZ43657.1| DNA mismatch repair protein mutL [Neisseria gonorrhoeae 35/02]
gi|268550558|gb|EEZ45577.1| DNA mismatch repair protein mutL [Neisseria gonorrhoeae FA19]
gi|268583199|gb|EEZ47875.1| DNA mismatch repair protein [Neisseria gonorrhoeae MS11]
gi|317164295|gb|ADV07836.1| DNA mismatch repair protein [Neisseria gonorrhoeae TCDC-NG08107]
Length = 658
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 161/397 (40%), Gaps = 62/397 (15%)
Query: 1 MKLVNEVYHQ-FNNHQYPFIILNIEMSRDSVDVNVTPDKRQI-FMDH---EKLLLATVKV 55
+ V + Y +N P +L +E+ +VDVNV P K +I F D +L+ T+
Sbjct: 264 LHAVKQAYRDVLHNALTPAFVLFLELPPKAVDVNVHPTKTEIRFRDSRQVHQLVFHTLNK 323
Query: 56 HITDSYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETI-----PVPSEDNS 110
+ D+ A N+ +S+ SN+ EV H+ P+PSE++S
Sbjct: 324 ALADTRA--------NLTESV---------------SNAGEVLHDITGVTPAPMPSENDS 360
Query: 111 N--FSHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARY 168
F +N P +PDT + P + R +LSL + + Y
Sbjct: 361 ENLFDSASN---HPTGNKPDTRNAFGSSGKTAPMPYQAARAPQQHSLSLRESRAAMDT-Y 416
Query: 169 ARRTVQAQDRCVE------NRFHANIDPSKNKEAESELNRVI-KKSMFEKMKIVGQFNLG 221
A + D +E RF + + ++ L+ I +S + LG
Sbjct: 417 AELYKKTDDIDLELSQFEQARFGNMPSETPAHKTDTPLSDGIPSQSELPPLGFAIAQLLG 476
Query: 222 -FIIVKYDSDLFIIDQHATDEKYNFETL----QKTTLIKSQKLVVPQNLHLTKINQCILK 276
+I+ + + L +ID HA E+ N+E + Q+ ++SQ L++P + L
Sbjct: 477 IYILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGNLQSQHLLIPVTFAASHEECAALA 536
Query: 277 DNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDI----EELLFMLQHTNSTEH 332
D+ G E S GN L + LG+ D+ ++L L S++
Sbjct: 537 DHAETLAGFGLEL---SDMGGNTLAVR---AAPVMLGKSDVVSLARDVLGELAQVGSSQT 590
Query: 333 CRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
R + A+ +C S+ GR L++ EM L+R+M
Sbjct: 591 IASHENR-ILATMSCHGSIRAGRRLTLPEMNALLRDM 626
>gi|284166477|ref|YP_003404756.1| DNA mismatch repair protein MutL [Haloterrigena turkmenica DSM
5511]
gi|284016132|gb|ADB62083.1| DNA mismatch repair protein MutL [Haloterrigena turkmenica DSM
5511]
Length = 738
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 75/171 (43%), Gaps = 6/171 (3%)
Query: 211 KMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL--IKSQKLVVPQNLHLT 268
++++GQ + +++ + D L +IDQHA DE+ N+E LQ+ +Q L P L LT
Sbjct: 541 ALRVLGQLDDTYLVCETDDGLVLIDQHAADERVNYERLQQAFADDPAAQALAEPVELELT 600
Query: 269 KINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELL--FMLQH 326
+ + G F D +DD V +T++P T+ E + ++L F+
Sbjct: 601 AAEAEAFEGYREALSRLG--FYADRTDDRTVAVTTVPAVLEETIAPERLRDVLASFVEGD 658
Query: 327 TNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPWV 377
+ + AC S+ +L+ G + L+ + + P+
Sbjct: 659 REAGAETVDALADEFLGDLACYPSITGNTSLTEGSVVDLLEALDDCENPYA 709
>gi|404492916|ref|YP_006717022.1| DNA mismatch repair protein [Pelobacter carbinolicus DSM 2380]
gi|123729468|sp|Q3A504.1|MUTL_PELCD RecName: Full=DNA mismatch repair protein MutL
gi|77544991|gb|ABA88553.1| DNA mismatch repair protein MutL [Pelobacter carbinolicus DSM 2380]
Length = 628
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 114/287 (39%), Gaps = 64/287 (22%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMNQ 74
++P ++L +E+ VDVNV P K ++ + L VH F V +
Sbjct: 282 RHPVLVLFLEIDPSQVDVNVHPTKHEVRFRQQAL------VH-------DFIVKA--LRD 326
Query: 75 SMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPDETI 134
++Q P+S +P+ NS F+ A E PDET
Sbjct: 327 HLQQVPTS--------------------AMPAPGNSPFTVPAR-----ENAASVKPDETK 361
Query: 135 EVIDDMPRL----QGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANIDP 190
+ D P +GS R P + + + + A D VE A+ P
Sbjct: 362 PALADTPAAFSAGEGSSRSDVPYPSASQVTETT-------DSYDAHDSGVEG---ASTAP 411
Query: 191 SKNKEAESELNRVIKKS-------MFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKY 243
++E + ++ S F ++++GQ+ +++ + + DL +IDQHA E+
Sbjct: 412 PLSEEGLFSVTADVRPSEQTENSGFFASLRLIGQYQNSYLVCQSEKDLILIDQHAAHERI 471
Query: 244 NFETLQKTTL---IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGF 287
FE L+K L I+ Q L+ P L I+++ ++ GF
Sbjct: 472 GFEHLRKQYLAGSIERQLLLFPLVLEFDFRLGRIVEEQRDSLFRLGF 518
>gi|15789473|ref|NP_279297.1| DNA mismatch repair protein [Halobacterium sp. NRC-1]
gi|169235188|ref|YP_001688388.1| DNA mismatch repair protein [Halobacterium salinarum R1]
gi|20455147|sp|Q9HSM6.1|MUTL_HALSA RecName: Full=DNA mismatch repair protein MutL
gi|229486323|sp|B0R2S6.1|MUTL_HALS3 RecName: Full=DNA mismatch repair protein MutL
gi|10579807|gb|AAG18777.1| DNA mismatch repair protein [Halobacterium sp. NRC-1]
gi|167726254|emb|CAP13036.1| DNA mismatch repair protein MutL [Halobacterium salinarum R1]
Length = 659
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/289 (20%), Positives = 114/289 (39%), Gaps = 41/289 (14%)
Query: 10 QFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDG 69
Q +YPF +L ++ + VD NV P K ++ + E + A V+ + D+ +D
Sbjct: 280 QLAPDRYPFAVLFVDC--EGVDANVHPRKLEVRFEDEAGVKAAVEAGVRDAL-----LDA 332
Query: 70 NNMNQSMEQDPSSDVDME-KIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPD 128
+ + S D E + S ++ + S+ + + + P
Sbjct: 333 GLVRAGAPRGASKPGDAEISPEHSPTDRDAGAAGGGDAAGQSDGNGQRTAASGATSESPA 392
Query: 129 TPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANI 188
+ ET G ++ S D +++ + RT RF A
Sbjct: 393 SAFET-----------GGGDEAADSAASTDGTRERPGSGTESRT---------GRFDA-- 430
Query: 189 DPSKNK---------EAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHAT 239
P++N EA+ + + ++ ++++GQ + +++ + L ++DQHA
Sbjct: 431 -PAENARLPTGAGGPEADDQ-DTTSERDSLPDLRVLGQLHDTYVVAEAGDGLVLVDQHAA 488
Query: 240 DEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFE 288
DE+ ++E LQ SQ LV P L LT + + L + GF+
Sbjct: 489 DERVHYERLQARVDGASQALVAPAELELTAGEAAVFEAALGGLRELGFD 537
>gi|354582778|ref|ZP_09001679.1| DNA mismatch repair protein MutL [Paenibacillus lactis 154]
gi|353199070|gb|EHB64536.1| DNA mismatch repair protein MutL [Paenibacillus lactis 154]
Length = 659
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 89/396 (22%), Positives = 158/396 (39%), Gaps = 46/396 (11%)
Query: 1 MKLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITD 59
M+ V + YH ++YP ++L + M +DVNV P K ++ E L + ++ +
Sbjct: 265 MQAVLKGYHTLLPINRYPLVVLQLSMHPSLIDVNVHPSKLEVRFSKEPELFSFIEEAVR- 323
Query: 60 SYAIGFTVDGNNMNQS-MEQDPSSDVDMEKIQRSNSEEVEHE-TIPVPSEDNSNFSHEAN 117
N + Q + P+ + I +S++ ++ + P PS A
Sbjct: 324 ----------NVLRQEILIPRPAK----QTIGKSDNAFIQEQLNFPAPSYGAPARGERAE 369
Query: 118 LQQSPETVEPDTPDETIEVI-DDMPR---LQGSYRQSTPVTLSLDIIQDQLKARYARRTV 173
+ Q +P E + PR LQ S S+ Q Q++ A
Sbjct: 370 IPQDGLGGKPPGESSGREFRRETAPRPDSLQESVTGSSGDYKEWTAQQPQMRETAAAAAY 429
Query: 174 QA----QDRCVENRFHANIDPSKNKEAESELNRVIKK-SMFEKMKIVGQFNLGFIIVKYD 228
+ +DR + R AN+ P+ KE + + F ++ +GQ + +II + +
Sbjct: 430 PSKPSYEDRAADRR-SANV-PAVTKEWMAAASGPAPDIPPFPQLTYIGQHHGTYIIAQNE 487
Query: 229 SDLFIIDQHATDEKYNFETLQK---TTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKN 285
+ L++IDQHA E+ N+E + SQ+L++P L T +K+ L F K
Sbjct: 488 TGLYLIDQHAAHERINYEYYYEQFGKPADASQELLLPITLEFTPSETEKVKERLHWFEKA 547
Query: 286 GFEFSFDSSDDGNVLLTS-----LPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRA 340
G F GN L P L E++ E + +H + + S I
Sbjct: 548 GVYMEFFG---GNTFLVRSHPFWFPKGDEKAL-IEEMAEWVLNERHIDIAKLREASSIMC 603
Query: 341 MFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+C+ S+ + L+ E L+R + QP+
Sbjct: 604 -----SCKASIKANQKLTEQEAMTLIRRLAECRQPY 634
>gi|294890797|ref|XP_002773319.1| DNA mismatch repair protein pms1, putative [Perkinsus marinus ATCC
50983]
gi|239878371|gb|EER05135.1| DNA mismatch repair protein pms1, putative [Perkinsus marinus ATCC
50983]
Length = 423
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 80/171 (46%), Gaps = 9/171 (5%)
Query: 206 KSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNL 265
++MF+ + V Q + FII ++ L IDQHA E+ E L + I + L
Sbjct: 224 RNMFKSLTDVRQVDRKFIIGRFGGTLLAIDQHAAGERVGLERLMSSAGILETQPTTGTLL 283
Query: 266 HLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQ 325
L + +L ++G+ F+ + ++T +P + TL + L +
Sbjct: 284 VLKPTDASLLHAREAELEEHGWRFAIIGA---RAVVTGVPKIRIGTLTASPYDLLPW--- 337
Query: 326 HTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+ E P+++ M+++ AC ++V G ++S E++ LV ++G + P+
Sbjct: 338 ---ANELPFPAKLHYMYSTTACHQAVKFGDSMSPSEVSALVSSLGICELPF 385
>gi|190571443|ref|YP_001975801.1| DNA mismatch repair protein [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|213018841|ref|ZP_03334649.1| DNA mismatch repair protein MutL [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|190357715|emb|CAQ55164.1| DNA mismatch repair protein MutL [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|212995792|gb|EEB56432.1| DNA mismatch repair protein MutL [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 609
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 76/153 (49%), Gaps = 12/153 (7%)
Query: 222 FIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPV 281
+II + L I+DQHA E+ +E L++ + IK QKL++P+ + +I + + V
Sbjct: 433 YIIAEVRDKLIIVDQHAAHERLVYECLKEKSSIKRQKLLLPE---MVEIKSQAGMEMIEV 489
Query: 282 FYKNGFEFSFD--SSDDGNVLLTSLPMSKNTTLGREDIEELLF-MLQHTNSTEHCRP--S 336
+ FE FD + +++ +P LG D++++L ++ E P
Sbjct: 490 YKDKLFEMGFDIEIKSENAIIVKEIP----AILGSIDVKKMLIDIVDRLIEIEDTLPIED 545
Query: 337 RIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
+I + A+ AC S+ GR + + EM L+R +
Sbjct: 546 KINKILATIACHGSIRAGRKMKLEEMNELLRQI 578
>gi|448534954|ref|XP_003870869.1| Mlh3 protein [Candida orthopsilosis Co 90-125]
gi|380355225|emb|CCG24741.1| Mlh3 protein [Candida orthopsilosis]
Length = 617
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 90/195 (46%), Gaps = 34/195 (17%)
Query: 209 FEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQK---TTLIKSQKLVVPQNL 265
+K +I+ Q + FI++ D L ++DQHA DE+ E L + T + ++ +L P +
Sbjct: 411 LQKYRIIKQIDKKFILLVIDFKLVVLDQHAADERIKVEELMQEFVTNMPRNLRLAQPIRI 470
Query: 266 HLTKINQCILKDNLPVFYKNGFEF----SFDSSDDGNVLLTSLP-MSKNTTLGREDIEEL 320
++ +L+ Y+ F+F +++ ++++T++P + NT+ I+ +
Sbjct: 471 KVSSSEHLLLQQ-----YRTNFKFWGIIYHSDAENYDLVITNVPELFINTSSDAHFIKSI 525
Query: 321 LFMLQHTNSTE-------------------HCRPSRIRAMFASRACRKSVMIGRALSVGE 361
L +QH + H P I + SRACR ++M G L++ E
Sbjct: 526 L--IQHCYDLQNNIKSQIFEATSSDWFTIMHHVPQSITNLINSRACRSAIMFGDELTMTE 583
Query: 362 MTGLVRNMGRIDQPW 376
M LV + R P+
Sbjct: 584 MHQLVEKLSRCRLPF 598
>gi|336462560|gb|AEI59747.1| DNA mismatch repair protein, partial [Wolbachia pipientis]
Length = 339
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 83/367 (22%), Positives = 148/367 (40%), Gaps = 83/367 (22%)
Query: 7 VYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYA--I 63
YH F N++YPF +L++E+ D VDVNV P+K ++ +++L+ V+ + + + I
Sbjct: 34 AYHDFIPNNRYPFAVLHLEVPYDQVDVNVHPNKSEVRFQNKRLIYEIVRRGLIKALSMRI 93
Query: 64 GFT----VDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQ 119
G + +DG+ E+ S D+ + QR NSE V + + + +L
Sbjct: 94 GTSSVSDIDGSRCQGIGEELGGSPFDVSESQR-NSERVNNGKSREVKGQKEFYERKPSLL 152
Query: 120 QSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRC 179
++ E + PDE L GS++
Sbjct: 153 ENRLMKEFNAPDERKR------SLSGSFK------------------------------- 175
Query: 180 VENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLG---------FIIVKYDSD 230
+ I+ S ++ L R E++ ++ LG +II +
Sbjct: 176 -----YEGIEKSTPQKGVMVLER-------EQIDLIADHPLGYARCHVYNTYIIAEAKDK 223
Query: 231 LFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQC------ILKDNLPVFYK 284
L I+DQHA E+ +E L T IK QK ++P+ + + NQ + KD L ++
Sbjct: 224 LIIVDQHAAHERLIYECL---TSIKRQKFLLPETVEIK--NQAGMEMVKMYKDKL---FE 275
Query: 285 NGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFAS 344
GF +S D V + +P T +E + ++ L T ++ + A+
Sbjct: 276 MGFGIEIESED--KVRVKEIPAILGTINVKEMVMNIVDRLMEIGDTLPIE-EKVNKILAT 332
Query: 345 RACRKSV 351
AC S+
Sbjct: 333 IACHGSI 339
>gi|429737002|ref|ZP_19270876.1| DNA mismatch repair protein [Selenomonas sp. oral taxon 138 str.
F0429]
gi|429153636|gb|EKX96414.1| DNA mismatch repair protein [Selenomonas sp. oral taxon 138 str.
F0429]
Length = 633
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 139/372 (37%), Gaps = 59/372 (15%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K ++ VY +P +L IE+ + ++DVNV P K ++ + E + V + D
Sbjct: 268 KAIDNVYRALVPKMGFPLAVLRIEVPQRTIDVNVHPQKTEMKFEDEGRIFKAVYKSVLD- 326
Query: 61 YAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSN------FSH 114
AI + + PS V +E +P+ N F+
Sbjct: 327 -AIRSAAGETAAIAAAVEKPS---------------VHYEAVPLNVGAGMNTGAHGAFAA 370
Query: 115 EANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQL-KARYARRTV 173
+ +P P T + + I P+ Q + L QD + AR R
Sbjct: 371 ASPQMNTPPAASPSTHNYAMPPIP--PQTVHEALQWRGQNIDLRATQDAVGAARMEERDT 428
Query: 174 QAQDRCVENR-FHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLF 232
A EN N+ P +GQ +L +II + L+
Sbjct: 429 LAAASSAENTGIEGNLLP------------------------IGQVDLTYIIAQSAQTLY 464
Query: 233 IIDQHATDEKYNFETLQ-KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSF 291
I+DQHA E+ F+ + I SQ+++V L + +N +F + GF
Sbjct: 465 IVDQHAAHERILFDRFSAQADGIPSQQMLVHAILSFDAHEAQYIDENAELFDRLGFH--L 522
Query: 292 DSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIR-AMFASRACRKS 350
+ + + LT P E I E+L L ++ P+ +R A A+ ACR +
Sbjct: 523 EPAGEREYRLTEAPADIPLDEAEETIREILVSLGDLHA---ATPANLRQAGIATMACRAA 579
Query: 351 VMIGRALSVGEM 362
+ G L+V +M
Sbjct: 580 IKAGEELNVRQM 591
>gi|26450625|dbj|BAC42424.1| putative DNA mismatch repair protein PMS1 [Arabidopsis thaliana]
Length = 733
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 34/44 (77%)
Query: 196 AESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHAT 239
A SEL R+ +K F +M+++GQFNLGFII K + DLFI+DQ ++
Sbjct: 688 ATSELERLFRKEDFRRMQVLGQFNLGFIIAKLERDLFIVDQSSS 731
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 40/62 (64%)
Query: 1 MKLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
+KLVNE+Y ++ +YP IL+ + + D+NVTPDKR++F E ++ +++ + +
Sbjct: 287 VKLVNELYKDTSSRKYPVTILDFIVPGGACDLNVTPDKRKVFFSDETSVIGSLREGLNEI 346
Query: 61 YA 62
Y+
Sbjct: 347 YS 348
>gi|413922862|gb|AFW62794.1| hypothetical protein ZEAMMB73_304615 [Zea mays]
Length = 673
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 39/61 (63%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
KLVNE+Y N QYP +IL+ + S DVN+ PDKR++F E ++L +++ + + Y
Sbjct: 287 KLVNELYRSSNAKQYPVVILDFHIPTTSYDVNIAPDKRKVFFSSESMILQSLRETVENLY 346
Query: 62 A 62
+
Sbjct: 347 S 347
>gi|27467893|ref|NP_764530.1| DNA mismatch repair protein [Staphylococcus epidermidis ATCC 12228]
gi|57866809|ref|YP_188446.1| DNA mismatch repair protein [Staphylococcus epidermidis RP62A]
gi|251810728|ref|ZP_04825201.1| DNA mismatch repair protein MutL [Staphylococcus epidermidis
BCM-HMP0060]
gi|282876271|ref|ZP_06285138.1| DNA mismatch repair protein, C-terminal domain protein
[Staphylococcus epidermidis SK135]
gi|417646314|ref|ZP_12296175.1| DNA mismatch repair protein, C-terminal domain protein
[Staphylococcus epidermidis VCU144]
gi|417913484|ref|ZP_12557151.1| DNA mismatch repair protein, C-terminal domain protein
[Staphylococcus epidermidis VCU109]
gi|418607738|ref|ZP_13170961.1| DNA mismatch repair protein [Staphylococcus epidermidis VCU057]
gi|418609790|ref|ZP_13172924.1| DNA mismatch repair protein [Staphylococcus epidermidis VCU065]
gi|418612150|ref|ZP_13175196.1| DNA mismatch repair protein [Staphylococcus epidermidis VCU117]
gi|418626827|ref|ZP_13189423.1| DNA mismatch repair protein [Staphylococcus epidermidis VCU126]
gi|420172704|ref|ZP_14679202.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM067]
gi|420193966|ref|ZP_14699795.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM021]
gi|420234456|ref|ZP_14739019.1| DNA mismatch repair protein [Staphylococcus epidermidis NIH051475]
gi|421607201|ref|ZP_16048447.1| DNA mismatch repair protein [Staphylococcus epidermidis AU12-03]
gi|38372356|sp|Q8CPE9.1|MUTL_STAES RecName: Full=DNA mismatch repair protein MutL
gi|71151980|sp|Q5HPP4.1|MUTL_STAEQ RecName: Full=DNA mismatch repair protein MutL
gi|27315438|gb|AAO04572.1|AE016747_69 DNA mismatch repair protein [Staphylococcus epidermidis ATCC 12228]
gi|57637467|gb|AAW54255.1| DNA mismatch repair protein HexB [Staphylococcus epidermidis RP62A]
gi|251805888|gb|EES58545.1| DNA mismatch repair protein MutL [Staphylococcus epidermidis
BCM-HMP0060]
gi|281295296|gb|EFA87823.1| DNA mismatch repair protein, C-terminal domain protein
[Staphylococcus epidermidis SK135]
gi|329728043|gb|EGG64487.1| DNA mismatch repair protein, C-terminal domain protein
[Staphylococcus epidermidis VCU144]
gi|341655766|gb|EGS79490.1| DNA mismatch repair protein, C-terminal domain protein
[Staphylococcus epidermidis VCU109]
gi|374403855|gb|EHQ74850.1| DNA mismatch repair protein [Staphylococcus epidermidis VCU057]
gi|374406126|gb|EHQ77029.1| DNA mismatch repair protein [Staphylococcus epidermidis VCU065]
gi|374820032|gb|EHR84146.1| DNA mismatch repair protein [Staphylococcus epidermidis VCU117]
gi|374831371|gb|EHR95113.1| DNA mismatch repair protein [Staphylococcus epidermidis VCU126]
gi|394241381|gb|EJD86795.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM067]
gi|394266664|gb|EJE11289.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM021]
gi|394304259|gb|EJE47666.1| DNA mismatch repair protein [Staphylococcus epidermidis NIH051475]
gi|406656993|gb|EKC83386.1| DNA mismatch repair protein [Staphylococcus epidermidis AU12-03]
Length = 645
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 83/381 (21%), Positives = 158/381 (41%), Gaps = 31/381 (8%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K + E YH ++P +NI+M VDVNV P K ++ + E L + I ++
Sbjct: 265 KAILEGYHTLLTIGRFPICYINIQMDPILVDVNVHPTKLEVRLSKEDQLYDLIVTKIREA 324
Query: 61 YAIGFTVDGNNMNQSMEQDPSSDV-DMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQ 119
+ + N++N + +++ + + +KI + ET D + +H+
Sbjct: 325 FKDKILIPQNDLNHASKKNKVLETFEQQKINFEKQQSQIGETSAPYVHDQKDKNHDVESH 384
Query: 120 QSPETVEPDTPDETIEVIDDMP-RLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDR 178
++ T +E+ EV +++ + SY QS L D+ Q+ Y Q+ D
Sbjct: 385 KNNLDSTSSTNNESTEVSNELHNHIDDSYLQSQKEVL-FDMEQNT-SNEYEISNQQSND- 441
Query: 179 CVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHA 238
K +++ RV M+IVGQ + +II + ++ +F+IDQHA
Sbjct: 442 ------------IKGTVSQTPHRRV------PYMEIVGQVHGTYIIAQNENGMFMIDQHA 483
Query: 239 TDEKYNFETLQKT---TLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSD 295
E+ +E ++ + Q L++P H +K Q I+ K G
Sbjct: 484 AQERIKYEYFREKIGEVTNEVQNLLIPLTFHFSKDEQMIIDQYKDELDKVGVHLEHFGGH 543
Query: 296 DGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGR 355
D ++ S P+ E I++++ ++ S + + A+ S C+KS+
Sbjct: 544 D--YIVNSYPVWFPKEEAEEIIKDMIELVLKHKSVDVKKIREDAAIMMS--CKKSIKANH 599
Query: 356 ALSVGEMTGLVRNMGRIDQPW 376
L EM L+ + + P+
Sbjct: 600 YLKNNEMADLIDQLREAEDPF 620
>gi|414160619|ref|ZP_11416885.1| DNA mismatch repair protein mutL [Staphylococcus simulans
ACS-120-V-Sch1]
gi|410878139|gb|EKS26028.1| DNA mismatch repair protein mutL [Staphylococcus simulans
ACS-120-V-Sch1]
Length = 649
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 84/392 (21%), Positives = 162/392 (41%), Gaps = 49/392 (12%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K + E YH +YP +NIEM VDVNV P K ++ + E+ L + I D+
Sbjct: 265 KAILEGYHTLLTIGRYPICYINIEMDPILVDVNVHPTKLEVRLSKEEQLYDLIVEKIRDA 324
Query: 61 YAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNS--EEVEHETIPVPSEDNSNFSHEANL 118
+ + N+ N K+ + N E E + + + + +N
Sbjct: 325 FKDKILIPHNDEN--------------KLYKKNKVLESFEQQKLDFEKRNQQQSTQTSND 370
Query: 119 QQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQ--------DQLKARYAR 170
+ E+ EP+ P+E + + +Y++ LS D+ + D L
Sbjct: 371 LPTTES-EPEVPNEQVSEKNTSTSDYQAYQEMQKAMLS-DLEEKDNQSDNDDALLNENEA 428
Query: 171 RTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSD 230
T ++ + ++ ++N + K M++VGQ + +II + ++
Sbjct: 429 TTHTPEEAAYGAQPTPDVRETQNAQP---------KHRVPYMEVVGQVHGTYIIAQNETG 479
Query: 231 LFIIDQHATDEKYNFETLQKT---TLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGF 287
+F+IDQHA E+ +E ++ + Q L++P H +K Q I+ + K G
Sbjct: 480 MFMIDQHAAQERIKYEYFREKIGEVTNEVQNLLIPLTFHFSKDEQMIIDEFKDELDKVGV 539
Query: 288 EFS-FDSSDDGNVLLTSLPMSKNTTLGREDIEELL-FMLQHTNSTEHCRPSRIRAMFA-S 344
F + D ++ S P+ E I++++ ++L+H + +IR A
Sbjct: 540 HLEPFGAHD---YIVNSYPVWFPKAEAEEIIQDMVEYVLEH----KKVEIKKIREEAAIM 592
Query: 345 RACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+C+KS+ L EM L+ + ++ P+
Sbjct: 593 MSCKKSIKANHYLRNHEMADLIDQLREMEDPF 624
>gi|403380641|ref|ZP_10922698.1| DNA mismatch repair protein mutL [Paenibacillus sp. JC66]
Length = 750
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 78/172 (45%), Gaps = 8/172 (4%)
Query: 209 FEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQK---TTLIKSQKLVVPQNL 265
F + +GQ + +I+ + + L++IDQHA E+ N+E + SQ+L+VP L
Sbjct: 558 FPALTPIGQLHGTYILAQNEQGLYLIDQHAAHERINYEYYYEKFGKPEEASQELLVPLTL 617
Query: 266 HLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELL-FML 324
T +L + L F + G +S + ++ + P +E IEE+ +ML
Sbjct: 618 EFTPAEAALLNERLDWFERVG--VYMESFGGASFIVRAYPHWFPAGEEKELIEEMAEWML 675
Query: 325 QHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+ + + S C+ S+ +ALS+ EM L+R + P+
Sbjct: 676 TEKKQLDLAKLREKSSTLCS--CKASIKANQALSIAEMETLIRRLAGCRIPY 725
>gi|417958724|ref|ZP_12601637.1| DNA mismatch repair protein mutL [Neisseria weaveri ATCC 51223]
gi|343966536|gb|EGV34792.1| DNA mismatch repair protein mutL [Neisseria weaveri ATCC 51223]
Length = 660
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 76/157 (48%), Gaps = 17/157 (10%)
Query: 222 FIIVKYDSDLFIIDQHATDEKYNFETL--QKTTL--IKSQKLVVPQNLHLTKINQCILKD 277
+I+ + + L +ID HA E+ N+E + Q+ TL +++Q+L++P + L D
Sbjct: 480 YILAQAEDSLLLIDMHAAAERINYEKMKSQRNTLGSLQTQRLLIPVTFSASHEETATLAD 539
Query: 278 NLPVFYKNGFEFSFDSSDDGN--VLLTSLPMSKNTTLGREDIEELLF-MLQHT--NSTEH 332
+ G E S D G + + ++P LG+ D+ L ML+ N +
Sbjct: 540 HAEALRGFGLELS----DMGGNTIAVRAVP----AMLGKSDVASLARDMLREIAQNGSSQ 591
Query: 333 CRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
+R + ++ AC SV GR L++ EM L+R+M
Sbjct: 592 TIEARENQILSTMACHGSVRAGRQLTLPEMNALLRDM 628
>gi|315646576|ref|ZP_07899694.1| DNA mismatch repair protein MutL [Paenibacillus vortex V453]
gi|315278219|gb|EFU41539.1| DNA mismatch repair protein MutL [Paenibacillus vortex V453]
Length = 660
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 82/385 (21%), Positives = 157/385 (40%), Gaps = 23/385 (5%)
Query: 1 MKLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITD 59
M+ + YH +++P +++ + M +DVNV P K ++ E+ L A V+ I
Sbjct: 265 MQAILRGYHTLLPINRFPLVVIQLTMHPSLIDVNVHPSKLEVRFSKEQELFAFVEEEIRK 324
Query: 60 SYAIGFTV---DGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEA 116
+ + +S + Q ++ E P+ + + S +
Sbjct: 325 VLQQEILIPRPAKQAIGKSEHAFIQEQLHFPNAQGRDASVRSREDGEAPAARSGDQSDQG 384
Query: 117 NLQQSPE-TVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQA 175
P + P+ D ++ + R G TP T S+ + A + ++
Sbjct: 385 MTSFPPHGSAWPEKRDH-LQPESGIKRSYGDGSGGTPATASM-------RETAAASSYRS 436
Query: 176 QDRCVENRFHANIDPSKNKEA-ESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFII 234
+ R EN+ +A+I PS KE ++ + F ++ ++GQ + ++I + DS L++I
Sbjct: 437 EYR-YENKGNAHI-PSVTKEWLQAASGPAPEIPPFPELTLIGQHHGTYLIAQNDSGLYLI 494
Query: 235 DQHATDEKYNFETLQK---TTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSF 291
DQHA E+ N+E + SQ+L++P L T +K L F K G F
Sbjct: 495 DQHAAHERINYEYYYEQFGKPADASQELLLPITLEFTPSESEKVKQRLHWFEKVGVYMEF 554
Query: 292 DSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSV 351
L+ S P + IEE+ + + + + ++ S C+ S+
Sbjct: 555 FGGQ--TFLVRSHPFWFPKGDEKAIIEEMAEWVLSERNIDVAKLRETSSIMCS--CKASI 610
Query: 352 MIGRALSVGEMTGLVRNMGRIDQPW 376
+ L+ E L++ +G QP+
Sbjct: 611 KANQKLTEQEAMTLIQRLGDCRQPY 635
>gi|59801161|ref|YP_207873.1| DNA mismatch repair protein [Neisseria gonorrhoeae FA 1090]
gi|268603752|ref|ZP_06137919.1| DNA mismatch repair protein [Neisseria gonorrhoeae PID1]
gi|81311203|sp|Q5F8M6.1|MUTL_NEIG1 RecName: Full=DNA mismatch repair protein MutL
gi|59718056|gb|AAW89461.1| putative DNA mismatch repair protein [Neisseria gonorrhoeae FA
1090]
gi|268587883|gb|EEZ52559.1| DNA mismatch repair protein [Neisseria gonorrhoeae PID1]
Length = 658
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 94/396 (23%), Positives = 160/396 (40%), Gaps = 60/396 (15%)
Query: 1 MKLVNEVYHQ-FNNHQYPFIILNIEMSRDSVDVNVTPDKRQI-FMDH---EKLLLATVKV 55
+ V + Y +N P +L +E+ ++VDVNV P K +I F D +L+ T+
Sbjct: 264 LHAVKQAYRDVLHNALTPAFVLFLELPPEAVDVNVHPTKTEIRFRDSRQVHQLVFHTLNK 323
Query: 56 HITDSYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETI-----PVPSE-DN 109
+ D+ A N+ +S+ SN+ EV H+ P+PSE D
Sbjct: 324 ALADTRA--------NLTESV---------------SNAGEVLHDITGVTPAPMPSENDG 360
Query: 110 SNFSHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYA 169
N A+ P +PDT + P + R +LSL + + YA
Sbjct: 361 ENLFDSAS--NHPTGNKPDTRNAFGSSGKTAPMPYQAARAPQQHSLSLRESRAAMDT-YA 417
Query: 170 RRTVQAQDRCVE------NRFHANIDPSKNKEAESELNRVI-KKSMFEKMKIVGQFNLG- 221
+ D +E RF + + ++ L+ I +S + LG
Sbjct: 418 ELYKKTDDIDLELSQFEQARFGNMPSETPAHKTDTPLSDGIPSQSELPPLGFAIAQLLGI 477
Query: 222 FIIVKYDSDLFIIDQHATDEKYNFETL----QKTTLIKSQKLVVPQNLHLTKINQCILKD 277
+I+ + + L +ID HA E+ N+E + Q+ ++SQ L++P + L D
Sbjct: 478 YILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGNLQSQHLLIPVTFAASHEECAALAD 537
Query: 278 NLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDI----EELLFMLQHTNSTEHC 333
+ G E S GN L + LG+ D+ ++L L S++
Sbjct: 538 HAETLAGFGLEL---SDMGGNTLAVR---AAPVMLGKSDVVSLARDVLGELAQVGSSQTI 591
Query: 334 RPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
R + A+ +C S+ GR L++ EM L+R+M
Sbjct: 592 ASHENR-ILATMSCHGSIRAGRRLTLPEMNALLRDM 626
>gi|420185397|ref|ZP_14691489.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM040]
gi|394254383|gb|EJD99352.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM040]
Length = 645
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 82/381 (21%), Positives = 159/381 (41%), Gaps = 31/381 (8%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K + E YH ++P +NI+M VDVNV P K ++ + E L + I ++
Sbjct: 265 KAILEGYHTLLTIGRFPICYINIQMDPILVDVNVHPTKLEVRLSKEDQLYDLIVTKIREA 324
Query: 61 YAIGFTVDGNNMNQSMEQDPSSDV-DMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQ 119
+ + N++N + +++ + + +KI + ET D ++ +H+
Sbjct: 325 FKDKILIPQNDLNHAPKKNKVLETFEQQKINFEKKQSQIGETSAPYVHDQNDKNHDVESH 384
Query: 120 QSPETVEPDTPDETIEVIDDMP-RLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDR 178
++ +E+ EV +++ + SY QS L D+ Q+ Y + Q+ D
Sbjct: 385 RNNLDSTSSANNESTEVSNELHNHIDDSYLQSQKEVL-FDMEQNS-SNEYEKLNQQSND- 441
Query: 179 CVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHA 238
K +++ RV M+IVGQ + +II + ++ +F+IDQHA
Sbjct: 442 ------------IKGTVSQTPHRRV------PYMEIVGQVHGTYIIAQNENGMFMIDQHA 483
Query: 239 TDEKYNFETLQKT---TLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSD 295
E+ +E ++ + Q L++P H +K Q I+ K G
Sbjct: 484 AQERIKYEYFREKIGEVTNEVQNLLIPLTFHFSKDEQMIIDQYKDELDKVGVHLEHFGGH 543
Query: 296 DGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGR 355
D ++ S P+ E I++++ ++ S + + A+ S C+KS+
Sbjct: 544 D--YIVNSYPVWFPKEEAEEIIKDMIELVLKHKSVDVKKIREDAAIMMS--CKKSIKANH 599
Query: 356 ALSVGEMTGLVRNMGRIDQPW 376
L EM L+ + + P+
Sbjct: 600 YLKNNEMADLIDQLREAEDPF 620
>gi|420165169|ref|ZP_14671873.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM088]
gi|394236336|gb|EJD81870.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM088]
Length = 645
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 83/381 (21%), Positives = 158/381 (41%), Gaps = 31/381 (8%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K + E YH ++P +NI+M VDVNV P K ++ + E L + I ++
Sbjct: 265 KAILEGYHTLLTIGRFPICYINIQMDPILVDVNVHPTKLEVRLSKEDQLYDLIVTKIREA 324
Query: 61 YAIGFTVDGNNMNQSMEQDPSSDV-DMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQ 119
+ + N++N + +++ + + +KI + ET D + +H+
Sbjct: 325 FKDKILIPQNDLNHASKKNKVLETFEQQKINFEKQQSQIGETSAPYVHDQKDKNHDVESH 384
Query: 120 QSPETVEPDTPDETIEVIDDMP-RLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDR 178
++ T +E+ EV +++ + SY QS L D+ Q+ Y Q+ D
Sbjct: 385 KNNLDSTSSTNNESTEVSNELHNHIDDSYLQSQKEVL-FDMEQNT-SNEYEISNQQSND- 441
Query: 179 CVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHA 238
K +++ RV M+IVGQ + +II + ++ +F+IDQHA
Sbjct: 442 ------------IKGTVSQTPHRRV------PYMEIVGQVHGTYIIAQNENGMFMIDQHA 483
Query: 239 TDEKYNFETLQKT---TLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSD 295
E+ +E ++ + Q L++P H +K Q I+ K G
Sbjct: 484 AQERIKYEYFREKIGEVTNEVQNLLIPLTFHFSKDEQMIIDQYKDELDKVGVHLEHFGGH 543
Query: 296 DGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGR 355
D ++ S P+ E I++++ ++ S + + A+ S C+KS+
Sbjct: 544 D--YIVNSYPVWFPKEEAEEIIKDMIELVLKHKSVDVKKIREDAAIMMS--CKKSIKANH 599
Query: 356 ALSVGEMTGLVRNMGRIDQPW 376
L EM L+ + + P+
Sbjct: 600 YLKNNEMADLIDQLREAEDPF 620
>gi|421675375|ref|ZP_16115296.1| DNA mismatch repair protein, C-terminal domain protein
[Acinetobacter baumannii OIFC065]
gi|421691897|ref|ZP_16131556.1| DNA mismatch repair protein [Acinetobacter baumannii IS-116]
gi|404562506|gb|EKA67730.1| DNA mismatch repair protein [Acinetobacter baumannii IS-116]
gi|410382306|gb|EKP34860.1| DNA mismatch repair protein, C-terminal domain protein
[Acinetobacter baumannii OIFC065]
Length = 650
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 149/372 (40%), Gaps = 54/372 (14%)
Query: 11 FNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGN 70
+ HQ+ +L +E+ +++DVNV P K +I +++ + V+ + ++ A F
Sbjct: 288 LHGHQHSSYLLFLEVDPENIDVNVHPTKHEIRFLNQREVHEFVRHYAKETLA-QFQTASA 346
Query: 71 NMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTP 130
++ Q+M+ D D N S +Q P+ E T
Sbjct: 347 DLAQAMKVD----------------------------DTQNLS----VQPQPKYQEQFTL 374
Query: 131 DETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRC-VENRFHANID 189
T + D Y+ ST + + + Q YA +T + + N +
Sbjct: 375 HRTAQAADTAVDKPNGYQPSTELLTDFNNSRPQ-AVHYAEQTPKYNGSAQLNNALKTYLA 433
Query: 190 PSKNKEA----ESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNF 245
P +++ A + + V K F + Q + +I+ + L I+D HA E+
Sbjct: 434 PLRDQPANFSVDESIEPVAKIDEFPLGIAIAQLHGIYILAQNTEGLIIVDMHAAHERILL 493
Query: 246 ETLQ----KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLL 301
+ ++ K SQ+L++P+ L ++++ ++D P + G E D D V++
Sbjct: 494 QQMKNAWDKPEFWTSQQLLIPKVLSISRMQAVRVEDLKPQLERLGLE--IDLYGDEQVIV 551
Query: 302 TSLPMSKNTTLGREDIE----ELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRAL 357
+P L + D E ELL L + + R + A AC +V R L
Sbjct: 552 RGVP----AILQKADFENLIPELLNDLDPNDEAQGLLQKR-DELLAGMACHGAVRAHRQL 606
Query: 358 SVGEMTGLVRNM 369
S+ EM L+R M
Sbjct: 607 SLSEMNALLRQM 618
>gi|419498775|ref|ZP_14038475.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47597]
gi|379603663|gb|EHZ68431.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47597]
Length = 649
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 155/368 (42%), Gaps = 41/368 (11%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMNQ 74
++P +++I + DVNV P K+++ + EK L+ V I +S Q
Sbjct: 280 RFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLK----------EQ 329
Query: 75 SMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPDETI 134
++ P + ++ K N E+VE +P+ ++N+ + E EP P +T
Sbjct: 330 TL--IPDALENLAKSTVRNREKVEQTILPL--KENTLYY---------EKTEPSRPSQT- 375
Query: 135 EVIDDMPRLQGSYRQSTPVTL-SLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKN 193
EV D L + T +LD + K +A R D+ HA +D +
Sbjct: 376 EVADYQVELTDEGQDLTLFAKETLDRLTKPAKLHFAERKPANYDQLD----HAELDLASI 431
Query: 194 KEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL 253
+A +L R + S F +++ GQ + ++ + L+IIDQHA E+ +E +++
Sbjct: 432 DKAYDKLERE-EASSFPELEFFGQMHGTYLFAQGRDGLYIIDQHAAQERVKYEEYRESIG 490
Query: 254 ---IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNT 310
Q+L+VP + LK+ +P+ + G + + +L P+
Sbjct: 491 NVDQSQQQLLVPYIFEFPADDALRLKERMPLLEEVGVFLA--EYGENQFILREHPI---- 544
Query: 311 TLGREDIEELLF-MLQHTNSTEHCRPSRIRAMFA-SRACRKSVMIGRALSVGEMTGLVRN 368
+ E+IE ++ M T+ + RA A +C++S+ + L+
Sbjct: 545 WMAEEEIESGIYEMCDMLLLTKEVSIKKYRAELAIMMSCKRSIKANHRIDDHSARQLLYQ 604
Query: 369 MGRIDQPW 376
+ + D P+
Sbjct: 605 LSQCDNPY 612
>gi|418411716|ref|ZP_12984982.1| DNA mismatch repair protein mutL [Staphylococcus epidermidis
BVS058A4]
gi|410891299|gb|EKS39096.1| DNA mismatch repair protein mutL [Staphylococcus epidermidis
BVS058A4]
Length = 645
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 84/381 (22%), Positives = 159/381 (41%), Gaps = 31/381 (8%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K + E YH ++P +NI+M VDVNV P K ++ + E L + I ++
Sbjct: 265 KAILEGYHTLLTIGRFPICYINIQMDPILVDVNVHPTKLEVRLSKEDQLYDLIVTKIREA 324
Query: 61 YAIGFTVDGNNMNQSMEQDPSSDV-DMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQ 119
+ + N++N +++ + + +KI + ET D ++ +H+ Q
Sbjct: 325 FKDKILIPQNDLNHVPKKNKVLETFEQQKINFEKKQSQIGETSAPYVHDQNDKNHDVESQ 384
Query: 120 QSPETVEPDTPDETIEVIDDMP-RLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDR 178
++ T +E+ EV +++ + SY QS L D+ Q+ Y Q+ D
Sbjct: 385 RNNLDSTSSTNNESTEVSNELHNHIDDSYLQSQKEVL-FDMEQNT-SNEYEILNQQSND- 441
Query: 179 CVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHA 238
K +++ RV M+IVGQ + +II + ++ +F+IDQHA
Sbjct: 442 ------------IKGTVSQTPHRRV------PYMEIVGQVHGTYIIAQNENGMFMIDQHA 483
Query: 239 TDEKYNFETLQKT---TLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSD 295
E+ +E ++ + Q L++P H +K Q I+ K G
Sbjct: 484 AQERIKYEYFREKIGEVTNEVQNLLIPLTFHFSKDEQMIIDQYKDELDKVGVHLEHFGGH 543
Query: 296 DGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGR 355
D ++ S P+ E I++++ ++ S + + A+ S C+KS+
Sbjct: 544 D--YIVNSYPIWFPKEEAEEIIKDMIELVLKHKSVDVKKIREDAAIMMS--CKKSIKANH 599
Query: 356 ALSVGEMTGLVRNMGRIDQPW 376
L EM L+ + + P+
Sbjct: 600 YLKNNEMADLIDQLREAEDPF 620
>gi|433590039|ref|YP_007279535.1| DNA mismatch repair protein MutL [Natrinema pellirubrum DSM 15624]
gi|448333846|ref|ZP_21523034.1| DNA mismatch repair protein MutL [Natrinema pellirubrum DSM 15624]
gi|433304819|gb|AGB30631.1| DNA mismatch repair protein MutL [Natrinema pellirubrum DSM 15624]
gi|445621420|gb|ELY74895.1| DNA mismatch repair protein MutL [Natrinema pellirubrum DSM 15624]
Length = 724
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 86/208 (41%), Gaps = 7/208 (3%)
Query: 174 QAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFI 233
+ +DR + +F A + + E+ ++++GQ + +++ + D L +
Sbjct: 491 RGRDRDADRKFDAATE-QRTLTGEAATGEETAFDSLPPLRVLGQLHDTYLVCETDDGLVL 549
Query: 234 IDQHATDEKYNFETLQKTTL--IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSF 291
IDQHA DE+ N+E LQ +Q L P L LT + G F
Sbjct: 550 IDQHAADERVNYERLQAAFADDPTAQALADPVELELTAAEAEAFAQYSDALSRLG--FYA 607
Query: 292 DSSDDGNVLLTSLPMSKNTTLGREDIEELL--FMLQHTNSTEHCRPSRIRAMFASRACRK 349
D +DD V +T++P TL + + ++L F+ + + + AC
Sbjct: 608 DRTDDRTVAVTTVPAVLEETLEPDRLRDVLASFVAGDSEAGAETVDALADEFLGDLACYP 667
Query: 350 SVMIGRALSVGEMTGLVRNMGRIDQPWV 377
S+ +L+ G + L+ + + P+
Sbjct: 668 SITGNTSLTEGSVVDLLEALDDCENPYA 695
>gi|194398020|ref|YP_002036880.1| DNA mismatch repair protein [Streptococcus pneumoniae G54]
gi|418120296|ref|ZP_12757244.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA44194]
gi|419490165|ref|ZP_14029907.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47179]
gi|421274150|ref|ZP_15724984.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA52612]
gi|238690840|sp|B5E6C5.1|MUTL_STRP4 RecName: Full=DNA mismatch repair protein MutL
gi|194357687|gb|ACF56135.1| DNA mismatch repair protein HexB [Streptococcus pneumoniae G54]
gi|353794851|gb|EHD75203.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA44194]
gi|379596445|gb|EHZ61249.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47179]
gi|395875985|gb|EJG87062.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA52612]
Length = 649
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 155/368 (42%), Gaps = 41/368 (11%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMNQ 74
++P +++I + DVNV P K+++ + EK L+A V I +S Q
Sbjct: 280 RFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMALVSEAIANSLK----------EQ 329
Query: 75 SMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPDETI 134
++ P + ++ K N E+VE +P+ ++N+ + E EP P +T
Sbjct: 330 TL--IPDALENLAKSTVRNREKVEQTILPL--KENTFYY---------EKTEPSRPSQT- 375
Query: 135 EVIDDMPRLQGSYRQSTPVTL-SLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKN 193
EV D L + T +LD + K +A R D+ H +D +
Sbjct: 376 EVADYQVELTDEGQDLTLFAKETLDRLTKPAKLHFAERKPANYDQLD----HPELDLASI 431
Query: 194 KEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL 253
+A +L R + S F +++ GQ + ++ + L+IIDQHA E+ +E +++
Sbjct: 432 DKAYDKLERE-EASSFPELEFFGQMHGTYLFAQGRDGLYIIDQHAAQERVKYEEYRESIG 490
Query: 254 ---IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNT 310
Q+L+VP + LK+ +P+ + G + + +L P+
Sbjct: 491 NVDQSQQQLLVPYIFEFPADDALRLKERMPLLEEVGVFLA--EYGENQFILREHPI---- 544
Query: 311 TLGREDIEELLF-MLQHTNSTEHCRPSRIRAMFA-SRACRKSVMIGRALSVGEMTGLVRN 368
+ E+IE ++ M T+ + RA A +C++S+ + L+
Sbjct: 545 WMAEEEIESGIYEMCDMLLLTKEVSIKKYRAELAIMMSCKRSIKANHRIDDHSARQLLYQ 604
Query: 369 MGRIDQPW 376
+ + D P+
Sbjct: 605 LSQCDNPY 612
>gi|410944491|ref|ZP_11376232.1| DNA mismatch repair protein MutL [Gluconobacter frateurii NBRC
101659]
Length = 551
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 78/167 (46%), Gaps = 21/167 (12%)
Query: 218 FNLGFIIVKYDSDLFIIDQHATDEKYNFETLQK---TTLIKSQKLVVPQNLHLTKINQCI 274
F+ I V D DL ++DQHA E+ E L++ + ++SQ L++P+ + L +
Sbjct: 363 FDTYIIAVAPDGDLVLVDQHAAHERLTHERLREQYASGALRSQALLLPEVIDLPRREAEA 422
Query: 275 LKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLF----------ML 324
L + G + +S G+VLL S+P LG +D++ LL L
Sbjct: 423 LLARSEDLSRLGMD--LESFGPGSVLLRSVP----ALLGTKDVQGLLRDVADELANDPDL 476
Query: 325 QHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGR 371
+ N+ +R+ A+ A AC S+ GR L EM L+R M R
Sbjct: 477 EAGNTDSFS--NRLDAILARMACHGSIRAGRRLKPEEMDALLREMER 521
>gi|421862792|ref|ZP_16294496.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|309379702|emb|CBX21691.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 658
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 94/402 (23%), Positives = 170/402 (42%), Gaps = 72/402 (17%)
Query: 1 MKLVNEVYHQ-FNNHQYPFIILNIEMSRDSVDVNVTPDKRQI-FMDHEK---LLLATVKV 55
+ V + Y +N P +L +++ ++VDVNV P K +I F D + L+ T+
Sbjct: 264 LHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSRQVHQLVFHTLNK 323
Query: 56 HITDSYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETI-----PVPSEDNS 110
+ D+ A ++ +S+ N+ EV H+ P+PSE++S
Sbjct: 324 ALADTRA--------DLTESV---------------GNAGEVLHDITGVTPAPMPSENDS 360
Query: 111 N--FSHEANLQQSPETVEPDTPDETIEVIDDMPR-LQGSYRQSTPVTLSLDIIQDQLKAR 167
F +N P +PDT + P Q +Y P SL + + +
Sbjct: 361 ENLFDSASNY---PTGNKPDTRNAFGASGKTAPMPYQAAY---APQQRSLSLRESRAAMN 414
Query: 168 -YARRTVQAQD------RCVENRFHANIDPSKNKEAESEL---NRVIKKSMFEKMKIVGQ 217
YA + D R + RF N+ PS+ +++ + + +S +
Sbjct: 415 TYAELYKKTDDIDLELSRFEQARF-GNM-PSETPAPKTDTPLSDGIPSQSELPPLGFAIA 472
Query: 218 FNLG-FIIVKYDSDLFIIDQHATDEKYNFETLQK----TTLIKSQKLVVPQNLHLTKINQ 272
LG +I+ + + L +ID HA E+ N+E +++ ++SQ+L++P +
Sbjct: 473 QLLGIYILAQAEDSLLLIDMHAAAERVNYEKMKRQRRENGRLQSQRLLIPSTFAASHEEC 532
Query: 273 CILKDNLPVFYKNGFEFSFDSSDDGNVL-LTSLPMSKNTTLGREDI----EELLFMLQHT 327
L D+ G E S GN L + ++P LG+ D+ +++L L
Sbjct: 533 AALADHAETLAGFGLEL---SDMGGNTLAVRAVP----AMLGKADVVSLAKDVLNELAQV 585
Query: 328 NSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
S++ R + A+ +C SV GR L++ EM L+R+M
Sbjct: 586 GSSQTIEEHENR-ILATMSCHGSVRAGRQLTLPEMNALLRDM 626
>gi|420163367|ref|ZP_14670114.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM095]
gi|420167654|ref|ZP_14674306.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM087]
gi|394235056|gb|EJD80630.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM095]
gi|394237682|gb|EJD83168.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM087]
Length = 645
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 84/381 (22%), Positives = 159/381 (41%), Gaps = 31/381 (8%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K + E YH ++P +NI+M VDVNV P K ++ + E L + I ++
Sbjct: 265 KAILEGYHTLLTIGRFPICYINIQMDPILVDVNVHPTKLEVRLSKEDQLYDLIVTKIREA 324
Query: 61 YAIGFTVDGNNMNQSMEQDPSSDV-DMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQ 119
+ + N++N +++ + + +KI + ET D ++ +H+ Q
Sbjct: 325 FKDKILIPQNDLNHVPKKNKVLETFEQQKINFEKKQSQIGETSAPYVHDQNDKNHDVESQ 384
Query: 120 QSPETVEPDTPDETIEVIDDMP-RLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDR 178
++ T +E+ EV +++ + SY QS L D+ Q+ Y Q+ D
Sbjct: 385 RNNLDSTSSTNNESTEVSNELHNHIDDSYLQSQKEVL-FDMEQNT-SNEYEILNQQSND- 441
Query: 179 CVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHA 238
K +++ RV M+IVGQ + +II + ++ +F+IDQHA
Sbjct: 442 ------------IKGTVSQTPHRRV------PYMEIVGQVHGTYIIAQNENGMFMIDQHA 483
Query: 239 TDEKYNFETLQKT---TLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSD 295
E+ +E ++ + Q L++P H +K Q I+ K G
Sbjct: 484 AQERIKYEYFREKIGEVTNEVQNLLIPLTFHFSKDEQMIIDQYKDELDKVGVHLEHFGGH 543
Query: 296 DGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGR 355
D ++ S P+ E I++++ ++ S + + A+ S C+KS+
Sbjct: 544 D--YIVNSYPIWFPKEEAEEIIKDMIELVLKHKSVDVKKIREDAAIMMS--CKKSIKANH 599
Query: 356 ALSVGEMTGLVRNMGRIDQPW 376
L EM L+ + + P+
Sbjct: 600 YLKNNEMADLIDQLREAEDPF 620
>gi|418329433|ref|ZP_12940501.1| DNA mismatch repair protein [Staphylococcus epidermidis 14.1.R1.SE]
gi|365230468|gb|EHM71563.1| DNA mismatch repair protein [Staphylococcus epidermidis 14.1.R1.SE]
Length = 645
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 83/381 (21%), Positives = 160/381 (41%), Gaps = 31/381 (8%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K + E YH ++P +NI+M VDVNV P K ++ + E L + I ++
Sbjct: 265 KAILEGYHTLLTIGRFPICYINIQMDPILVDVNVHPTKLEVRLSKEDQLYDLIVTKIREA 324
Query: 61 YAIGFTVDGNNMNQSMEQDPSSDV-DMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQ 119
+ + N++N++ +++ + + +KI + ET D + +H+
Sbjct: 325 FKDKILIPQNDLNRTPKKNKVLETFEQQKINFEKKQSQIGETSAPYVHDQKDKNHDVESH 384
Query: 120 QSPETVEPDTPDETIEVIDDMP-RLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDR 178
++ T +E+ EV +++ + +Y QS L D+ QD Y Q++D
Sbjct: 385 RNNLDSTSLTNNESTEVSNELNNHIDDTYLQSQKEVL-FDMEQDT-SNEYEILNQQSKD- 441
Query: 179 CVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHA 238
K +++ RV M+IVGQ + +II + ++ +F+IDQHA
Sbjct: 442 ------------IKGTVSQTPHRRV------PYMEIVGQVHGTYIIAQNENGMFMIDQHA 483
Query: 239 TDEKYNFETLQKT---TLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSD 295
E+ +E ++ + Q L++P H +K Q I+ K G
Sbjct: 484 AQERIKYEYFREKIGEVTNEVQNLLIPLTFHFSKDEQMIIDQYKDELDKVGVHLEHFGGH 543
Query: 296 DGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGR 355
D ++ S P+ E I++++ ++ S + + A+ S C+KS+
Sbjct: 544 D--YIVNSYPVWFPKVEAEEIIKDMIELVLKHKSVDVKKIREDAAIMMS--CKKSIKANH 599
Query: 356 ALSVGEMTGLVRNMGRIDQPW 376
L EM L+ + + P+
Sbjct: 600 YLKNNEMADLIDQLREAEDPF 620
>gi|283768572|ref|ZP_06341484.1| DNA mismatch repair protein, C-terminal domain protein [Bulleidia
extructa W1219]
gi|283104964|gb|EFC06336.1| DNA mismatch repair protein, C-terminal domain protein [Bulleidia
extructa W1219]
Length = 577
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 88/182 (48%), Gaps = 22/182 (12%)
Query: 205 KKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNF-ETLQKTTLIKS-QKLVVP 262
+K+ +M+++GQ + FI+ Y+ L I+DQHA E+ +F E +QK S Q L+VP
Sbjct: 385 RKTTLPQMQVIGQLHDKFILCAYEEGLAILDQHAAQERVHFEEYVQKLNQNPSMQDLLVP 444
Query: 263 QNLH--------LTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGR 314
LH + ++N+ LKD + + + + +L ++P+
Sbjct: 445 MMLHSDRTVVERVQEVNEA-LKD---------LHITLEPFGENSFVLRTIPIWLKELEME 494
Query: 315 EDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQ 374
++++L ++ ++ R R A+ AC S+ R+L+V EM +VR + +
Sbjct: 495 PFLQDVLDGFKNDQEIKYTRLE--RKHIATLACHHSIRFNRSLTVEEMKEVVRQLYTCEN 552
Query: 375 PW 376
P+
Sbjct: 553 PY 554
>gi|418165805|ref|ZP_12802463.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA17971]
gi|353831900|gb|EHE12023.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA17971]
Length = 649
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 155/368 (42%), Gaps = 41/368 (11%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMNQ 74
++P +++I + DVNV P K+++ + EK L+A V I +S Q
Sbjct: 280 RFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMALVSEAIANSLK----------EQ 329
Query: 75 SMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPDETI 134
++ P + ++ K N E+VE +P+ ++N+ + E EP P +T
Sbjct: 330 TL--IPDALENLAKSTVRNREKVEQTILPL--KENTLYY---------EKTEPSRPSQT- 375
Query: 135 EVIDDMPRLQGSYRQSTPVTL-SLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKN 193
EV D L + T +LD + K +A R D+ H +D +
Sbjct: 376 EVADYQVELTDEGQDLTLFAKETLDRLTKPAKLHFAERKPANYDQLD----HPELDLASI 431
Query: 194 KEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL 253
+A +L R + S F +++ GQ + ++ + L+IIDQHA E+ +E +++
Sbjct: 432 DKAYDKLERE-EASSFPELEFFGQMHGTYLFAQGRDGLYIIDQHAAQERVKYEEYRESIG 490
Query: 254 ---IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNT 310
Q+L+VP + LK+ +P+ + G + + +L P+
Sbjct: 491 NVDQSQQQLLVPYIFEFPADDALRLKERMPLLEEVGVFLA--EYGENQFILREHPI---- 544
Query: 311 TLGREDIEELLF-MLQHTNSTEHCRPSRIRAMFA-SRACRKSVMIGRALSVGEMTGLVRN 368
+ E+IE ++ M T+ + RA A +C++S+ + L+
Sbjct: 545 WMAEEEIESGIYEMCDMLLLTKEVSIKKYRAELAIMMSCKRSIKANHRIDDHSARQLLYQ 604
Query: 369 MGRIDQPW 376
+ + D P+
Sbjct: 605 LSQCDNPY 612
>gi|330507604|ref|YP_004384032.1| DNA mismatch repair protein MutL [Methanosaeta concilii GP6]
gi|328928412|gb|AEB68214.1| DNA mismatch repair protein MutL [Methanosaeta concilii GP6]
Length = 571
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 11/169 (6%)
Query: 212 MKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQ---KTTLIKSQKLVVPQNLHLT 268
+KI+GQ +I+ + D L +IDQHA E+ FE L+ + LI+ Q+L P + L
Sbjct: 384 LKILGQIKRLYIVAESDQGLVLIDQHAAAERIRFEGLEERYREGLIR-QELACPVTIELM 442
Query: 269 KINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELL--FMLQH 326
+ +L V GFE S S + + S+P T E + ++L L+
Sbjct: 443 ASEEIMLSSWKEVLDDIGFEIS--SFGGRSYSVRSVPALGQRTESAESVHDVLKELFLRG 500
Query: 327 TNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQP 375
+ R + + ACR S+ G+ L++ EM L+ ++ P
Sbjct: 501 KPGPDSSRRDEVLKLL---ACRGSIKSGKELTLKEMEQLLHDLQECSNP 546
>gi|448683833|ref|ZP_21692453.1| DNA mismatch repair protein MutL [Haloarcula japonica DSM 6131]
gi|445783406|gb|EMA34235.1| DNA mismatch repair protein MutL [Haloarcula japonica DSM 6131]
Length = 717
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 121/306 (39%), Gaps = 52/306 (16%)
Query: 3 LVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQI-FMD----HEKLLLATVKVHI 57
+V+ Q +YPF +L +++ VDVNV P K ++ F D E++ A +
Sbjct: 284 VVDAYGTQIAPDRYPFAVLFLDVPAGDVDVNVHPRKMEVRFADDEGVREQVRTAVEDALL 343
Query: 58 TDSYAIGFTVDGNNMNQSMEQDPSSD--VDMEKIQRSNSEEVE----------------- 98
+ G + + E P SD D E+ QRS+S++++
Sbjct: 344 REGLLRSTAPRGRSAPEQTEITPESDGTSDGER-QRSDSDDLDAGDEAATSARPDSTTTE 402
Query: 99 -------HETIPVPSEDNSNFSHEANLQQSPETVEPDTPDE-----TIEVIDDMPRLQGS 146
++ P P+E + E QS ET D + T E DD G
Sbjct: 403 SDADTPLQKSSPDPTERPESAQTERAGHQSAETPSSDRSADAKRASTTEAKDDTSGGSGE 462
Query: 147 YRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKK 206
R V+ S D + A A RT + E +F + ++ L +
Sbjct: 463 RRTEGSVS-SGDSAGARRDASVAGRTETERG---ERKF-------TGGQEQTHLGDAPEA 511
Query: 207 S--MFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKT--TLIKSQKLVVP 262
S M+I+GQ +++ + D L ++DQHA DE+ N+E L+ +Q L P
Sbjct: 512 SHESLPSMRILGQLADTYVVAETDDGLVLVDQHAADERVNYERLKAKFEGETTTQALADP 571
Query: 263 QNLHLT 268
L LT
Sbjct: 572 VELELT 577
>gi|225174621|ref|ZP_03728619.1| DNA mismatch repair protein MutL [Dethiobacter alkaliphilus AHT 1]
gi|225169748|gb|EEG78544.1| DNA mismatch repair protein MutL [Dethiobacter alkaliphilus AHT 1]
Length = 605
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 86/170 (50%), Gaps = 10/170 (5%)
Query: 209 FEKMKIVGQFNLGFIIVKYDS-DLFIIDQHATDEKYNFETLQKTTLIKSQKL--VVPQNL 265
F +++ +GQ+ +I+ + + +L+++DQHA E+ ++ L++ + + V+PQ
Sbjct: 418 FPRLRPIGQYRDTYILAQSQTGELYVVDQHAAHERVLYDQLKRELSDGTLPVQDVIPQTF 477
Query: 266 HLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQ 325
L + L +L +F + G F++ + +L S+PM L ++D+ E+L
Sbjct: 478 ELDPLTAAALLKSLNIFAELGLR--FETFGNNIFILRSIPMFFRHCLNQDDLTEILNSAA 535
Query: 326 HTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQP 375
++T H ++ M +C+ +V ++L EM+ L+ N+ QP
Sbjct: 536 DADNT-HLFEKTLQMM----SCKGAVKANQSLDPKEMSALLNNLAETSQP 580
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 102/252 (40%), Gaps = 50/252 (19%)
Query: 14 HQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHE----KLLLATVKVHITDSYAIGFTVDG 69
+++P I+ +EM VDVNV P KR++ E + LLA K + + IG G
Sbjct: 279 NRFPAAIVFVEMDTSEVDVNVHPAKREVRFSRERDIYRQLLAGAKAALRQASLIGEM--G 336
Query: 70 NNMNQSM-EQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHE---ANLQQSPETV 125
++ E ++ + I +++ + +P+ S E A ++++ ET
Sbjct: 337 TPHTAALRETAAATGFYDQAIDFDRQKKLPQDNVPLESPFAGKREAEAVPAEIKETNETA 396
Query: 126 EPDTPDETIEVIDDM-------PRLQ--GSYRQSTPVTLSLD--------------IIQD 162
EP + E +D+ PRL+ G YR + + S ++ D
Sbjct: 397 EPAAAETNREATEDVRETTHNFPRLRPIGQYRDTYILAQSQTGELYVVDQHAAHERVLYD 456
Query: 163 QLKARYARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGF 222
QLK + T+ QD + F EL+ + ++ + + I + L F
Sbjct: 457 QLKRELSDGTLPVQD-VIPQTF--------------ELDPLTAAALLKSLNIFAELGLRF 501
Query: 223 IIVKYDSDLFII 234
+ +++FI+
Sbjct: 502 --ETFGNNIFIL 511
>gi|326791329|ref|YP_004309150.1| DNA mismatch repair protein MutL [Clostridium lentocellum DSM 5427]
gi|326542093|gb|ADZ83952.1| DNA mismatch repair protein MutL [Clostridium lentocellum DSM 5427]
Length = 663
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 77/162 (47%), Gaps = 20/162 (12%)
Query: 213 KIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQ---KTTLIKSQKLVVPQNLHLTK 269
+IVGQ + +++Y +FIIDQHA E+ +E K + +Q L++P+ L +T
Sbjct: 477 RIVGQVFKTYWLIEYHEKVFIIDQHAAHERVLYEQFMAEFKANEVATQLLLMPETLMVTP 536
Query: 270 INQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNS 329
+ +L ++ +F K GF+ F++ + V + +P N L +E+L L H
Sbjct: 537 VEMTLLNEHEELFKKLGFQ--FEAFGENAVAIREVPFILNEPLSPAVFKEVLDRLTHDKL 594
Query: 330 TE------------HCRPSRIRA--MFASRACRKSVMIGRAL 357
+ CR S I+A + R CRK + + AL
Sbjct: 595 QDIAELKAEAIIRMSCR-SAIKAHDQISDRECRKLIELLLAL 635
>gi|433477886|ref|ZP_20435204.1| DNA mismatch repair protein mutL [Neisseria meningitidis 70012]
gi|432214702|gb|ELK70598.1| DNA mismatch repair protein mutL [Neisseria meningitidis 70012]
Length = 658
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 93/398 (23%), Positives = 166/398 (41%), Gaps = 64/398 (16%)
Query: 1 MKLVNEVYHQ-FNNHQYPFIILNIEMSRDSVDVNVTPDKRQI-FMDHEK---LLLATVKV 55
+ V + Y +N P +L +++ ++VDVNV P K +I F D ++ L+ T+
Sbjct: 264 LHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSQQVHQLVFHTLNK 323
Query: 56 HITDSYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETI-----PVPSEDNS 110
+ D+ A ++ +S+ N+ EV HE P+PSE++S
Sbjct: 324 ALADTRA--------DLTESV---------------GNAGEVLHEITGVTPAPMPSENDS 360
Query: 111 -NFSHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYA 169
N + A+ P +PDT + P + R +LSL + + YA
Sbjct: 361 ENLFNRAS--DYPTGNKPDTRNAFGASGKTAPMPYQAARAPQQRSLSLRESRAAMNT-YA 417
Query: 170 RRTVQAQD------RCVENRFHANIDPSKNKEAESEL---NRVIKKSMFEKMKIVGQFNL 220
+ D R + RF N+ PS+ +++ + + +S + L
Sbjct: 418 ELYKKTDDIDLELSRFEQARF-GNM-PSETPAPQTDTPLSDGIPSQSELPPLGFAIAQLL 475
Query: 221 G-FIIVKYDSDLFIIDQHATDEKYNFETL----QKTTLIKSQKLVVPQNLHLTKINQCIL 275
G +I+ + + L +ID HA E+ N+E + Q+ ++SQ+L++P + L
Sbjct: 476 GIYILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGRLQSQRLLIPVTFAASHEECAAL 535
Query: 276 KDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDI----EELLFMLQHTNSTE 331
D G E S GN L + LG+ D+ ++L L S++
Sbjct: 536 ADYAETLAGFGLEL---SDMGGNTLAVR---AAPAMLGKSDVVSLARDVLGELAQVGSSQ 589
Query: 332 HCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
R + A+ +C S+ GR L++ EM L+R+M
Sbjct: 590 TIEEHENR-ILATMSCHGSIRAGRRLTLPEMNVLLRDM 626
>gi|168486054|ref|ZP_02710562.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae
CDC1087-00]
gi|419441616|ref|ZP_13981651.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA13224]
gi|419509519|ref|ZP_14049164.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
NP141]
gi|421212219|ref|ZP_15669185.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2070108]
gi|421214444|ref|ZP_15671379.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2070109]
gi|183570845|gb|EDT91373.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae
CDC1087-00]
gi|379555112|gb|EHZ20181.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA13224]
gi|379634705|gb|EHZ99269.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
NP141]
gi|395582064|gb|EJG42527.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2070108]
gi|395582797|gb|EJG43247.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2070109]
Length = 649
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 155/368 (42%), Gaps = 41/368 (11%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMNQ 74
++P +++I + DVNV P K+++ + EK L+A V I +S Q
Sbjct: 280 RFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMALVSEAIANSLK----------EQ 329
Query: 75 SMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPDETI 134
++ P + ++ K N E+VE +P+ ++N+ + E EP P +T
Sbjct: 330 TL--IPDALENLAKSTVRNREKVEQTILPL--KENTLYY---------EKTEPSRPSQT- 375
Query: 135 EVIDDMPRLQGSYRQSTPVTL-SLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKN 193
EV D L + T +LD + K +A R D+ H +D +
Sbjct: 376 EVADYQVELTDEGQDLTLFAKETLDRLTKPAKLHFAERKPANYDQLD----HPELDLASI 431
Query: 194 KEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL 253
+A +L R + S F +++ GQ + ++ + L+IIDQHA E+ +E +++
Sbjct: 432 DKAYDKLERE-EASSFPELEFFGQMHGTYLFAQGRDGLYIIDQHAAQERVKYEEYRESIG 490
Query: 254 ---IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNT 310
Q+L+VP + LK+ +P+ + G + + +L P+
Sbjct: 491 NVDQSQQQLLVPYIFEFPADDALRLKERMPLLEEVGVFLA--EYGENQFILREHPI---- 544
Query: 311 TLGREDIEELLF-MLQHTNSTEHCRPSRIRAMFA-SRACRKSVMIGRALSVGEMTGLVRN 368
+ E+IE ++ M T+ + RA A +C++S+ + L+
Sbjct: 545 WMAEEEIESGIYEMCDMLLLTKEVSIKKYRAELAIMMSCKRSIKANHRIDDHSARQLLYQ 604
Query: 369 MGRIDQPW 376
+ + D P+
Sbjct: 605 LSQCDNPY 612
>gi|420169832|ref|ZP_14676410.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM070]
gi|420206383|ref|ZP_14711893.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM008]
gi|420209425|ref|ZP_14714862.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM003]
gi|394243132|gb|EJD88506.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM070]
gi|394278222|gb|EJE22539.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM008]
gi|394278872|gb|EJE23184.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM003]
Length = 645
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 160/387 (41%), Gaps = 43/387 (11%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K + E YH ++P +NI+M VDVNV P K ++ + E L + I ++
Sbjct: 265 KAILEGYHTLLTIGRFPICYINIQMDPILVDVNVHPTKLEVRLSKEDQLYDLIVTKIREA 324
Query: 61 YAIGFTVDGNNMNQS------MEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNF-S 113
+ + N++N + +E ++ EK Q+S E + + N + S
Sbjct: 325 FKDKILIPQNDLNHAPKKNKVLETFEQQKINFEK-QQSQIGETSAPYVHDQKDKNHDVES 383
Query: 114 HEANLQQSPETVEPDTPDETIEVIDDMP-RLQGSYRQSTPVTLSLDIIQDQLKARYARRT 172
H+ NL + T +E+ EV +++ + SY QS L D+ Q+ Y
Sbjct: 384 HKNNLDSTS-----STNNESTEVSNELHNHIDDSYLQSQKEVL-FDMEQNT-SNEYEISN 436
Query: 173 VQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLF 232
Q+ D K +++ RV M+IVGQ + +II + ++ +F
Sbjct: 437 QQSND-------------IKGTVSQTPHRRV------PYMEIVGQVHGTYIIAQNENGMF 477
Query: 233 IIDQHATDEKYNFETLQKT---TLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEF 289
+IDQHA E+ +E ++ + Q L++P H +K Q I+ K G
Sbjct: 478 MIDQHAAQERIKYEYFREKIGEVTNEVQNLLIPLTFHFSKDEQMIIDQYKDELDKVGVHL 537
Query: 290 SFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRK 349
D ++ S P+ E I++++ ++ S + + A+ S C+K
Sbjct: 538 EHFGGHD--YIVNSYPVWFPKEEAEEIIKDMIELVLKHKSVDVKKIREDAAIMMS--CKK 593
Query: 350 SVMIGRALSVGEMTGLVRNMGRIDQPW 376
S+ L EM L+ + + P+
Sbjct: 594 SIKANHYLKNNEMADLIDQLREAEDPF 620
>gi|385799934|ref|YP_005836338.1| DNA mismatch repair protein MutL [Halanaerobium praevalens DSM
2228]
gi|309389298|gb|ADO77178.1| DNA mismatch repair protein MutL [Halanaerobium praevalens DSM
2228]
Length = 650
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 169/399 (42%), Gaps = 61/399 (15%)
Query: 2 KLVNEVYHQFNN-HQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K V Y++ N + P + L I+++ VDVNV P KR++ +++ +K
Sbjct: 266 KAVETAYNKLTNPGRKPIVFLFIKVNPILVDVNVHPAKREVKFSRNQIIFDVIK------ 319
Query: 61 YAIGFTVDGNNMNQSMEQDPSSDVDME--KIQRSNSEEVEHETIPVPSEDNSNFSHEANL 118
A+ + N DP+ + +E K + + S++ E E N E N+
Sbjct: 320 KAVRQCLKAN--------DPTRRIKLEQNKTETTKSDKAEDEI-------NRENLFEKNI 364
Query: 119 QQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKAR-YARRTVQAQ- 176
+ +T DE ++ +L S + Q Q + YA++ Q
Sbjct: 365 K--------NTSDEKKAGLNKNQKLNTSKISKKGKYKKPNYPQKQSQLNSYAQKDYQKNI 416
Query: 177 DRCVENRFHANIDPSKNKEAESELN--RVIKKSMF--------EKMKI-VGQFNLGFIIV 225
+ +N+ + KE++S LN R +K + EK I +GQ ++++
Sbjct: 417 NYGKDNKGLTKKNGQSFKESQSNLNEIRAAEKQKYSLVESKAEEKYFIFLGQIFNSYLLI 476
Query: 226 KYDSDLFIIDQHATDEKYNFETL-----QKTTLIKSQKLVVPQNLHLTKINQCILKDNLP 280
+ D L I+DQH E+ +E QK SQ L++P + L+ + I++
Sbjct: 477 ETDKGLKIVDQHNAQERILYEKFYAEFNQKDK--SSQSLLIPVKIELSIEEREIVRQ--- 531
Query: 281 VFYKNGF-EFSFDSSDDGN--VLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSR 337
Y+N + D SD GN +L+ +P+ R IEEL+ L T+ +
Sbjct: 532 --YENEIKKLGIDFSDFGNNTILIQEVPVLLKNKSTRNIIEELIADLAEAGKTKSTAEIQ 589
Query: 338 IRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
R M ACR S+ G+ L+ E L++++ + + P+
Sbjct: 590 KR-MLEYLACRSSIKAGQPLTKRESIQLIKDLYQTENPY 627
>gi|189218041|ref|YP_001938683.1| DNA mismatch repair enzyme MutL [Methylacidiphilum infernorum V4]
gi|189184899|gb|ACD82084.1| DNA mismatch repair enzyme MutL [Methylacidiphilum infernorum V4]
Length = 595
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 77/169 (45%), Gaps = 11/169 (6%)
Query: 213 KIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFET--LQKTTLIK-SQKLVVPQNLHLTK 269
KIVG F+ +I ++ + +IDQHA E+ FE LQ ++ K SQKL+ P + L+
Sbjct: 395 KIVGLFSSLYIAIETAEGIMLIDQHAAHERVLFEKLLLQFESMQKHSQKLITPLLISLSS 454
Query: 270 INQCILKDNLPVFYKNGFE---FSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQH 326
IL +LP F + GFE F S LL S+P + E+L L
Sbjct: 455 TESAILSHSLPFFEQLGFEVRPFGLSS-----FLLESIPSGVKRMDYEQFFREVLAELVE 509
Query: 327 TNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQP 375
T+ + + A CR+++ G L+ E LV+N+ P
Sbjct: 510 TDRQKKTARFYWQRDIALAVCRQAIKSGDPLTKEEQEELVKNLFACKLP 558
>gi|331001790|ref|ZP_08325312.1| hypothetical protein HMPREF0491_00174 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330412764|gb|EGG92147.1| hypothetical protein HMPREF0491_00174 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 661
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 162/386 (41%), Gaps = 49/386 (12%)
Query: 14 HQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVD----G 69
HQYPF L+ ++ + VDVNV P K ++ ++ K + D + V G
Sbjct: 277 HQYPFCALSFDI--EGVDVNVHPRKMEVRFSDRNIVYNAAKEAVEDIFKTQSAVREVPVG 334
Query: 70 NNMNQSMEQDPSSDVDMEKIQR----SNSEEVEHETIPVPSEDNSNFSHEANLQQSPETV 125
N + + ++ E +R S ++ + VP E + N +++ L
Sbjct: 335 KNTSNEKKTFINTPEPFENRRRDISFSKPDKDDEIQWTVPKETSYNPQNDSVLFNE---- 390
Query: 126 EPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFH 185
D + + + QG Y S + I + + Y + ++
Sbjct: 391 -----DNSKNIYFNNSIRQGEYADSKATEKTYTDINENIS--YTGIKTENNTENIKTTKE 443
Query: 186 ANI----DPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDE 241
A+I + S NKE S+++ K+S + +K+VGQ + IV+ ++D++IIDQHA E
Sbjct: 444 ADIPTDVETSANKEKASQISFFDKESK-KYIKVVGQVFDTYWIVQLENDMYIIDQHAAHE 502
Query: 242 KYNFETL---QKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGF---EFSFDSSD 295
K +E L K + I +Q + P + LT + Q +L +L F GF EF
Sbjct: 503 KVMYERLLRESKNSKITAQMINPPIIVTLTDVEQDVLNKHLDEFKNAGFDIEEFGGKEYK 562
Query: 296 DGNV--LLTSLPMSKNTTLGREDIEELLF--MLQHTNSTEHCRPSR-IRAMFASRACRKS 350
++ + S+P ++ LF ML + + + PS I A AS AC+ +
Sbjct: 563 INSIPNIFPSIPKAE------------LFNEMLSDSTNYDIISPSEIILAKTASMACKAA 610
Query: 351 VMIGRALSVGEMTGLVRNMGRIDQPW 376
+ +S+ E L + + P+
Sbjct: 611 IKGNMRISLMEANELFDELLSLKNPY 636
>gi|342732426|ref|YP_004771265.1| DNA mismatch repair protein MutL [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|342329881|dbj|BAK56523.1| DNA mismatch repair protein MutL [Candidatus Arthromitus sp.
SFB-mouse-Japan]
Length = 609
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 71/369 (19%), Positives = 157/369 (42%), Gaps = 67/369 (18%)
Query: 14 HQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMN 73
++YPF I + + +DVN+ P K +I + E+++ Y+ + N +N
Sbjct: 278 NKYPFFITFLNIDPKDIDVNIHPTKAEIKFEDERMI-----------YSFLYKTYANELN 326
Query: 74 QSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPDET 133
+ SNS V+ I N L S + V P + +E
Sbjct: 327 DCL---------------SNSTLVKKNDITGIITSNDKL-----LSLSKKNVSPFSKEEL 366
Query: 134 IEVIDDMPRLQGSYRQSTPV-TLSLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSK 192
++D +L SY + + TL D++ ++ F N
Sbjct: 367 QRLMDKRDKLD-SYNTNNKIETLPYDLVNNE-------------------EFDKNHFEEL 406
Query: 193 NKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFE----TL 248
N+ + E ++ + +I+GQ+N +II ++ + +IIDQH EK FE +
Sbjct: 407 NENLKFE---ILNNTQTSDFRIIGQYNKTYIIGEWYDNFYIIDQHVAHEKILFEEFINKI 463
Query: 249 QKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSK 308
+ ++K ++++P +HL +++ ++N F G F+ ++ D ++++ +P
Sbjct: 464 KNGNILK--QVIIPSIVHLNELSYSTYQNNKHYFDNCG--FTIETFGDNSIIIREVPFEF 519
Query: 309 NTTLGREDIEELLFMLQHTNSTEHCRPSRIRA-MFASRACRKSVMIGRALSVGEMTGLVR 367
+ I L ++Q+ ++ + ++ + A++AC+ ++ L+ E+ L+
Sbjct: 520 RDCDAKSLI---LDIIQNIDNFGSGTLAEVKYDLIATKACKNAIKANCILNDQEIKILIS 576
Query: 368 NMGRIDQPW 376
+ +++ P+
Sbjct: 577 KLMKLENPF 585
>gi|421551057|ref|ZP_15997057.1| DNA mismatch repair protein mutL [Neisseria meningitidis 69166]
gi|433471853|ref|ZP_20429236.1| DNA mismatch repair protein mutL [Neisseria meningitidis 68094]
gi|433526285|ref|ZP_20482915.1| DNA mismatch repair protein mutL [Neisseria meningitidis 69096]
gi|433539218|ref|ZP_20495693.1| DNA mismatch repair protein mutL [Neisseria meningitidis 70030]
gi|402328591|gb|EJU63958.1| DNA mismatch repair protein mutL [Neisseria meningitidis 69166]
gi|432207810|gb|ELK63798.1| DNA mismatch repair protein mutL [Neisseria meningitidis 68094]
gi|432261049|gb|ELL16306.1| DNA mismatch repair protein mutL [Neisseria meningitidis 69096]
gi|432272941|gb|ELL28043.1| DNA mismatch repair protein mutL [Neisseria meningitidis 70030]
Length = 658
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 93/398 (23%), Positives = 166/398 (41%), Gaps = 64/398 (16%)
Query: 1 MKLVNEVYHQ-FNNHQYPFIILNIEMSRDSVDVNVTPDKRQI-FMDHEK---LLLATVKV 55
+ V + Y +N P +L +++ ++VDVNV P K +I F D ++ L+ T+
Sbjct: 264 LHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSQQVHQLVFHTLNK 323
Query: 56 HITDSYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETI-----PVPSEDNS 110
+ D+ A ++ +S+ N+ EV HE P+PSE++S
Sbjct: 324 ALADTRA--------DLTESV---------------GNAGEVLHEITGVTPAPMPSENDS 360
Query: 111 -NFSHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYA 169
N + A+ P +PDT + P + R +LSL + + YA
Sbjct: 361 ENLFNRAS--DYPTGNKPDTRNAFGASGKTAPMPYQAARAPQQRSLSLRESRAAMNT-YA 417
Query: 170 RRTVQAQD------RCVENRFHANIDPSKNKEAESEL---NRVIKKSMFEKMKIVGQFNL 220
+ D R + RF N+ PS+ +++ + + +S + L
Sbjct: 418 ELYKKTDDIDLELSRFEQARF-GNM-PSETPAPQTDTPLSDGIPSQSELPPLGFAIAQLL 475
Query: 221 G-FIIVKYDSDLFIIDQHATDEKYNFETL----QKTTLIKSQKLVVPQNLHLTKINQCIL 275
G +I+ + + L +ID HA E+ N+E + Q+ ++SQ+L++P + L
Sbjct: 476 GIYILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGRLQSQRLLIPVTFAASHEECAAL 535
Query: 276 KDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDI----EELLFMLQHTNSTE 331
D G E S GN L + LG+ D+ ++L L S++
Sbjct: 536 ADYAETLAGFGLEL---SDMGGNTLAVR---AAPAMLGKSDVVSLARDVLGELAQVGSSQ 589
Query: 332 HCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
R + A+ +C S+ GR L++ EM L+R+M
Sbjct: 590 TIEEHENR-ILATMSCHGSIRAGRRLTLPEMNVLLRDM 626
>gi|421544765|ref|ZP_15990838.1| DNA mismatch repair protein mutL [Neisseria meningitidis NM140]
gi|421546853|ref|ZP_15992895.1| DNA mismatch repair protein mutL [Neisseria meningitidis NM183]
gi|421549100|ref|ZP_15995122.1| DNA mismatch repair protein mutL [Neisseria meningitidis NM2781]
gi|421553068|ref|ZP_15999037.1| DNA mismatch repair protein mutL [Neisseria meningitidis NM576]
gi|402322497|gb|EJU57955.1| DNA mismatch repair protein mutL [Neisseria meningitidis NM183]
gi|402322678|gb|EJU58129.1| DNA mismatch repair protein mutL [Neisseria meningitidis NM140]
gi|402324921|gb|EJU60343.1| DNA mismatch repair protein mutL [Neisseria meningitidis NM2781]
gi|402329581|gb|EJU64941.1| DNA mismatch repair protein mutL [Neisseria meningitidis NM576]
Length = 658
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 92/398 (23%), Positives = 167/398 (41%), Gaps = 64/398 (16%)
Query: 1 MKLVNEVYHQ-FNNHQYPFIILNIEMSRDSVDVNVTPDKRQI-FMDHEK---LLLATVKV 55
+ V + Y +N P +L +++ ++VDVNV P K +I F D ++ L+ T+
Sbjct: 264 LHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSQQVHQLVFHTLNK 323
Query: 56 HITDSYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETI-----PVPSEDNS 110
+ D+ A ++ +S+ N+ EV H+ P+PSE++S
Sbjct: 324 ALADTRA--------DLTESV---------------GNAGEVLHDITGVTPAPMPSENDS 360
Query: 111 -NFSHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYA 169
N + A+ P +PDT + P + R +LSL + + YA
Sbjct: 361 ENLFNRAS--DYPTGNKPDTRNAFGASGKTAPMPYQAARAPQQRSLSLRESRAAMNT-YA 417
Query: 170 RRTVQAQD------RCVENRFHANIDPSKNKEAESEL---NRVIKKSMFEKMKIVGQFNL 220
+ D R + RF N+ PS+ +++ + + +S + L
Sbjct: 418 ELYKKTDDIDLELSRFEQARF-GNM-PSETPAPQTDTPLSDGIPSQSELPPLGFAIAQLL 475
Query: 221 G-FIIVKYDSDLFIIDQHATDEKYNFETL----QKTTLIKSQKLVVPQNLHLTKINQCIL 275
G +I+ + + L +ID HA E+ N+E + Q+ ++SQ+L++P + L
Sbjct: 476 GIYILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGRLQSQRLLIPVTFAASHEECAAL 535
Query: 276 KDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDI----EELLFMLQHTNSTE 331
D G E S GN L + LG+ D+ +++L L S++
Sbjct: 536 ADYAETLAGFGLEL---SDMGGNTLAVR---AAPAMLGKSDVVSLAKDVLNELAQVGSSQ 589
Query: 332 HCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
R + A+ +C S+ GR L++ EM L+R+M
Sbjct: 590 TIEEHENR-ILATMSCHGSIRAGRRLTLPEMNALLRDM 626
>gi|114775687|ref|ZP_01451255.1| DNA mismatch repair protein [Mariprofundus ferrooxydans PV-1]
gi|114553798|gb|EAU56179.1| DNA mismatch repair protein [Mariprofundus ferrooxydans PV-1]
Length = 611
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 77/173 (44%), Gaps = 27/173 (15%)
Query: 215 VGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL---IKSQKLVVPQNLHLTKIN 271
+ Q + +I+ + DS + +IDQHA E+ +E L+ I +Q L+ P+ L L
Sbjct: 420 LAQIHRCYILAQTDSGVVLIDQHAAHERMTYEKLKAQLAGGDIATQMLLTPEALTLDGEA 479
Query: 272 QCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTE 331
L D+ + F +++ D + L+ S+P LG E + E++ T E
Sbjct: 480 AAWLHDHAVALHH--FGVDIEAAGDQSFLIRSVP----AMLGGEALVEMV-----TELVE 528
Query: 332 HCR------------PSRI-RAMFASRACRKSVMIGRALSVGEMTGLVRNMGR 371
CR +R+ +RAC+ S+ GR LS E L+R M R
Sbjct: 529 SCRLIGVDHEAGSSGGARVLERWLGNRACKGSIKSGRRLSHEEQLSLLREMER 581
>gi|418290871|ref|ZP_12902967.1| DNA mismatch repair protein MutL [Neisseria meningitidis NM220]
gi|372200843|gb|EHP14851.1| DNA mismatch repair protein MutL [Neisseria meningitidis NM220]
Length = 658
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 93/399 (23%), Positives = 164/399 (41%), Gaps = 66/399 (16%)
Query: 1 MKLVNEVYHQ-FNNHQYPFIILNIEMSRDSVDVNVTPDKRQI-FMDHEK---LLLATVKV 55
+ V + Y +N P +L +++ ++VDVNV P K +I F D ++ L+ T+
Sbjct: 264 LHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSQQVHQLVFHTLNK 323
Query: 56 HITDSYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETI-----PVPSEDNS 110
+ D+ A ++ +S+ SN+ EV H+ P PSE++S
Sbjct: 324 ALADTRA--------DLTESV---------------SNAGEVLHDITGVTPAPRPSENDS 360
Query: 111 N--FSHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARY 168
F +N P +PDT + P + R +LSL + + Y
Sbjct: 361 ENLFDSASNY---PTGNKPDTRNAFGSAGKTAPMPYQAARAPQQHSLSLRESRAAMNT-Y 416
Query: 169 ARRTVQAQD------RCVENRFHANIDPSKNKEAESEL---NRVIKKSMFEKMKIVGQFN 219
A + D R + RF N+ PS+ +++ + + S +
Sbjct: 417 AELYKKTDDIDLELSRFEQARF-GNM-PSETPAPQTDTPLSDGIPSPSELPPLGFAIAQL 474
Query: 220 LG-FIIVKYDSDLFIIDQHATDEKYNFETL----QKTTLIKSQKLVVPQNLHLTKINQCI 274
LG +I+ + + L +ID HA E+ N+E + Q+ ++SQ+L++P +
Sbjct: 475 LGIYILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGRLQSQRLLIPVTFAASHEECAA 534
Query: 275 LKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDI----EELLFMLQHTNST 330
L D+ G E S GN L + LG+ D+ ++L L S+
Sbjct: 535 LSDHADALAGFGLEL---SDMGGNTLAVR---AAPAMLGKADVVSLARDVLGELAQVGSS 588
Query: 331 EHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
+ + A+ +C SV GR L++ EM L+R+M
Sbjct: 589 QTIEEHE-NHILATMSCHGSVRAGRRLTLPEMNALLRDM 626
>gi|384455834|ref|YP_005668429.1| DNA mismatch repair protein MutL [Candidatus Arthromitus sp.
SFB-mouse-Yit]
gi|417961480|ref|ZP_12603894.1| DNA mismatch repair protein MutL [Candidatus Arthromitus sp. SFB-2]
gi|417964682|ref|ZP_12606369.1| DNA mismatch repair protein MutL [Candidatus Arthromitus sp. SFB-4]
gi|417969032|ref|ZP_12609997.1| DNA mismatch repair protein MutL [Candidatus Arthromitus sp.
SFB-co]
gi|418016158|ref|ZP_12655723.1| DNA mismatch repair protein [Candidatus Arthromitus sp.
SFB-mouse-NYU]
gi|418372693|ref|ZP_12964785.1| DNA mismatch repair protein MutL [Candidatus Arthromitus sp.
SFB-mouse-SU]
gi|345506493|gb|EGX28787.1| DNA mismatch repair protein [Candidatus Arthromitus sp.
SFB-mouse-NYU]
gi|346984177|dbj|BAK79853.1| DNA mismatch repair protein MutL [Candidatus Arthromitus sp.
SFB-mouse-Yit]
gi|380333248|gb|EIA23873.1| DNA mismatch repair protein MutL [Candidatus Arthromitus sp. SFB-2]
gi|380338603|gb|EIA27480.1| DNA mismatch repair protein MutL [Candidatus Arthromitus sp.
SFB-co]
gi|380340550|gb|EIA29127.1| DNA mismatch repair protein MutL [Candidatus Arthromitus sp. SFB-4]
gi|380342362|gb|EIA30807.1| DNA mismatch repair protein MutL [Candidatus Arthromitus sp.
SFB-mouse-SU]
Length = 609
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 71/369 (19%), Positives = 157/369 (42%), Gaps = 67/369 (18%)
Query: 14 HQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMN 73
++YPF I + + +DVN+ P K +I + E+++ Y+ + N +N
Sbjct: 278 NKYPFFITFLNIDPKDIDVNIHPTKAEIKFEDERMI-----------YSFLYKTYANELN 326
Query: 74 QSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPDET 133
+ SNS V+ I N L S + V P + +E
Sbjct: 327 DCL---------------SNSTLVKKNDITGIITSNDKL-----LSLSKKNVSPFSKEEL 366
Query: 134 IEVIDDMPRLQGSYRQSTPV-TLSLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSK 192
++D +L SY + + TL D++ ++ F N
Sbjct: 367 QRLMDKRDKLD-SYNTNNKIETLPYDLVNNE-------------------EFDKNHFEEL 406
Query: 193 NKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFE----TL 248
N+ + E ++ + +I+GQ+N +II ++ + +IIDQH EK FE +
Sbjct: 407 NENLKFE---ILNNTQTSDFRIIGQYNKTYIIGEWYDNFYIIDQHVAHEKILFEEFINKI 463
Query: 249 QKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSK 308
+ ++K ++++P +HL +++ ++N F G F+ ++ D ++++ +P
Sbjct: 464 KNGNILK--QVIIPSIVHLNELSYSTYQNNKHYFDNCG--FTIETFGDNSIIIREVPFEF 519
Query: 309 NTTLGREDIEELLFMLQHTNSTEHCRPSRIRA-MFASRACRKSVMIGRALSVGEMTGLVR 367
+ I L ++Q+ ++ + ++ + A++AC+ ++ L+ E+ L+
Sbjct: 520 RDCDAKSLI---LDIIQNIDNFGSGTLAEVKYDLIATKACKNAIKANCILNDQEIKILIS 576
Query: 368 NMGRIDQPW 376
+ +++ P+
Sbjct: 577 KLMKLENPF 585
>gi|406906446|gb|EKD47603.1| hypothetical protein ACD_65C00369G0001 [uncultured bacterium]
Length = 559
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 103/220 (46%), Gaps = 31/220 (14%)
Query: 179 CVENRFHANI-DPSKNKEAESELN---------------RVIKKSMFEKMKIVGQFNLGF 222
CVE+ + NI P EA++ + +++K ++K V Q +
Sbjct: 320 CVESALNKNILVPKVQIEADTAIPLQMEFREPGGIKDFIEIMQKGRTSELKPVAQIANSY 379
Query: 223 IIVKYDSDLFIIDQHATDEKYNFE----TLQKTTLIKSQKLVVPQNLHLTKINQCILKDN 278
I+ + D+ L IIDQHA E+ +E T++K+ L+ SQ ++ PQ + I++ N
Sbjct: 380 ILAEDDNGLVIIDQHAAHERVMYEKILDTVKKSQLV-SQAVLAPQPIDFGAAEAEIIRSN 438
Query: 279 LPVFYKNGFEFSFDSSDDGNVLLTSLP--MSKNTT--LGREDIEELLFMLQHTNSTEHCR 334
L + G E + L+TSLP M KN + + R I++L + + S + R
Sbjct: 439 LGSLKEIGVE--VEEFGGNTFLVTSLPADMVKNDSGEILRGLIDDLSELKKSGGSMQSKR 496
Query: 335 PSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQ 374
I FA ACR +V G+ LS E L+ + +ID+
Sbjct: 497 DYLIH--FA--ACRSAVKFGQKLSHEEQVALIDELFKIDR 532
>gi|417658897|ref|ZP_12308510.1| DNA mismatch repair protein, C-terminal domain protein
[Staphylococcus epidermidis VCU045]
gi|420221912|ref|ZP_14726837.1| DNA mismatch repair protein [Staphylococcus epidermidis NIH08001]
gi|420224774|ref|ZP_14729612.1| DNA mismatch repair protein [Staphylococcus epidermidis NIH06004]
gi|420229410|ref|ZP_14734116.1| DNA mismatch repair protein [Staphylococcus epidermidis NIH04003]
gi|329736536|gb|EGG72802.1| DNA mismatch repair protein, C-terminal domain protein
[Staphylococcus epidermidis VCU045]
gi|394289943|gb|EJE33813.1| DNA mismatch repair protein [Staphylococcus epidermidis NIH08001]
gi|394294177|gb|EJE37863.1| DNA mismatch repair protein [Staphylococcus epidermidis NIH06004]
gi|394299176|gb|EJE42727.1| DNA mismatch repair protein [Staphylococcus epidermidis NIH04003]
Length = 645
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 160/387 (41%), Gaps = 43/387 (11%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K + E YH ++P +NI+M VDVNV P K ++ + E L + I ++
Sbjct: 265 KAILEGYHTLLTIGRFPICYINIQMDPILVDVNVHPTKLEVRLSKEDQLYDLIVTKIREA 324
Query: 61 YAIGFTVDGNNMNQS------MEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNF-S 113
+ + N++N + +E ++ EK Q+S E + + N + S
Sbjct: 325 FKDKILIPQNDLNHAPKKNKVLETFEQQKINFEK-QQSQIGETSAPYVHDQKDKNHDVES 383
Query: 114 HEANLQQSPETVEPDTPDETIEVIDDMPR-LQGSYRQSTPVTLSLDIIQDQLKARYARRT 172
H+ NL + T +E+ EV +++ + SY QS L D+ Q+ Y
Sbjct: 384 HKNNLDSTS-----STNNESTEVSNELHNYIDDSYLQSQKEVL-FDMEQNT-SNEYEISN 436
Query: 173 VQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLF 232
Q+ D K +++ RV M+IVGQ + +II + ++ +F
Sbjct: 437 QQSND-------------IKGTVSQTPHRRV------PYMEIVGQVHGTYIIAQNENGMF 477
Query: 233 IIDQHATDEKYNFETLQKT---TLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEF 289
+IDQHA E+ +E ++ + Q L++P H +K Q I+ K G
Sbjct: 478 MIDQHAAQERIKYEYFREKIGEVTNEVQNLLIPLTFHFSKDEQMIIDQYKDELDKVGVHL 537
Query: 290 SFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRK 349
D ++ S P+ E I++++ ++ S + + A+ S C+K
Sbjct: 538 EHFGGHD--YIVNSYPVWFPKEEAEEIIKDMIELVLKHKSVDVKKIREDAAIMMS--CKK 593
Query: 350 SVMIGRALSVGEMTGLVRNMGRIDQPW 376
S+ L EM L+ + + P+
Sbjct: 594 SIKANHYLKNNEMADLIDQLREAEDPF 620
>gi|357055418|ref|ZP_09116486.1| hypothetical protein HMPREF9467_03458 [Clostridium clostridioforme
2_1_49FAA]
gi|355382537|gb|EHG29634.1| hypothetical protein HMPREF9467_03458 [Clostridium clostridioforme
2_1_49FAA]
Length = 687
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 85/404 (21%), Positives = 162/404 (40%), Gaps = 34/404 (8%)
Query: 2 KLVNEVYHQFN-NHQYPFIILNIEMSRDSVDVNVTPDKRQI-FMDHEKLLLATVKVHITD 59
K + E Y + H+YPF +L+ + D++DVNV P K ++ F D EK+ A ++ +++
Sbjct: 266 KAIEEAYKPYMMQHKYPFTMLHFHIEPDTLDVNVHPTKMELRFADGEKVYNAVLRA-VSN 324
Query: 60 SYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQ 119
+ A + ++ E++ + + E E + + NS H
Sbjct: 325 ALAHKELIPQVSLEARQEKEARQLAEKLAPRPEPFEVRRRENLSRKTAANSGQVHPGGPS 384
Query: 120 QSPETVE---PDTPDETIEVIDDMPRLQGSYRQSTPVTLSL-----DIIQDQLKARYARR 171
S P P E++ D + + +++ PV+ + + +L R R
Sbjct: 385 SSGSVYAQSAPPRPSFVNELMPDWLKERKKEQENRPVSPAALNSLKGTCKTELPVREDRM 444
Query: 172 TVQAQDRCVENRFHANIDP---------SKNKEAESELNRVIKKSMFE-----KMKIVGQ 217
+ + +++ S AE E + + + K K++GQ
Sbjct: 445 DTDTEKGAGVKKGAGSVNSDTPDTPSGQSAGSAAEPEQLDLFDGKLLDPKARLKHKLIGQ 504
Query: 218 FNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKS---QKLVVPQNLHLTKINQCI 274
+ +V+Y+ LFIIDQHA EK +E K+ + Q + P L L + +
Sbjct: 505 LFDTYWMVEYNEQLFIIDQHAAHEKVLYENTVKSLKTRQYDMQMVDPPIILTLNMNEELL 564
Query: 275 LKDNLPVFYKNGFEFS-FDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHC 333
LK + F GFE F + + +P + + +E + E++ L S +
Sbjct: 565 LKKYMDYFTGIGFEIEPFGGRE---YAVRGVPANLFSIAKKELLTEMIDGLSEDMSVHN- 620
Query: 334 RPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPWV 377
P I AS +C+ +V +S E L+ + ++ P+
Sbjct: 621 -PDIIYEKVASMSCKAAVKGHHTMSFQEANVLIDQLLDLENPYA 663
>gi|314936542|ref|ZP_07843889.1| DNA mismatch repair protein HexB [Staphylococcus hominis subsp.
hominis C80]
gi|313655161|gb|EFS18906.1| DNA mismatch repair protein HexB [Staphylococcus hominis subsp.
hominis C80]
Length = 674
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 84/393 (21%), Positives = 171/393 (43%), Gaps = 26/393 (6%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K + E YH +YP +NIEM VDVNV P K ++ + E+ L + I +
Sbjct: 265 KAITEGYHTLLTIGRYPICYINIEMDPILVDVNVHPTKLEVRLSKEEQLYNLIIEKIRHA 324
Query: 61 YAIGFTVDGNNMNQSMEQDP------SSDVDMEKIQRSNS---EEVEHETIPVPSEDN-- 109
+ + N+++++ +++ +D E+ Q++ S +++E++ P S +N
Sbjct: 325 FKDRILIPKNDLDRTPKKNKVLHTFEQQKIDFEQKQQNISNKIKQLENKNDPNVSTNNTF 384
Query: 110 SNFSHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTL-SLDIIQDQL-KAR 167
S S + + + + + +E V ++ + Y L SLD + + R
Sbjct: 385 STISSQYDEEHTSDDSYTREDNEHSSVYNNKRSMDKDYFDIQKDILNSLDRAESSIDNTR 444
Query: 168 YARRTVQAQDRCVENR-FHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVK 226
+ + D EN F N+ K ++ + +++ + + M++VGQ + +II +
Sbjct: 445 HDETNIYNYD---ENEDFQENVTNQKEQDIKGKVSSTPSRRV-PYMEVVGQVHGTYIIAQ 500
Query: 227 YDSDLFIIDQHATDEKYNFETLQKTTLIKS---QKLVVPQNLHLTKINQCILKDNLPVFY 283
++ +F+IDQHA E+ +E ++ S Q L++P H +K Q I+
Sbjct: 501 NENGMFMIDQHAAQERIKYEYFREKIGEVSNEVQDLLIPLTFHFSKDEQLIIDQYREELD 560
Query: 284 KNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFA 343
K G D ++ S P+ E I++++ ++ + + + A+
Sbjct: 561 KVGVHLEHFGGYD--YIVNSYPVWFPKVEAEEIIKDMIELVLNHKKIDVKKMREDAAIMM 618
Query: 344 SRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
S C+KS+ L EM L+ + + P+
Sbjct: 619 S--CKKSIKANHYLKKNEMADLIDQLREAEDPF 649
>gi|449119583|ref|ZP_21755979.1| DNA mismatch repair protein MutL [Treponema denticola H1-T]
gi|449121974|ref|ZP_21758320.1| DNA mismatch repair protein MutL [Treponema denticola MYR-T]
gi|448949415|gb|EMB30240.1| DNA mismatch repair protein MutL [Treponema denticola MYR-T]
gi|448950573|gb|EMB31395.1| DNA mismatch repair protein MutL [Treponema denticola H1-T]
Length = 606
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 140/337 (41%), Gaps = 64/337 (18%)
Query: 11 FNNHQYP--FIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVD 68
F N +P F+ LN++ R VD N+ P KR+ + K + ++ I+ Y D
Sbjct: 274 FPNGGFPAAFVFLNVDPER--VDFNIHPAKREAKFEDYKEIHHSLSSTISSFYKQKTVSD 331
Query: 69 GNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPD 128
+ +S + + + D EK + + ++ P +++ + LQ S +T P
Sbjct: 332 --LLKESYQPEYTRGFDFEKTEY-EAADLNQSYNPAGTKNYRQSNTSDYLQNSTKTYWPS 388
Query: 129 TPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANI 188
+P IE ++ + Q +L A + QD
Sbjct: 389 SPIRQIE--------------ASAAFQEVSATQHRLSAAAYETSAVPQD----------- 423
Query: 189 DPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETL 248
+ KS F K +GQF FI V+ ++ L+IIDQHA E+ FE L
Sbjct: 424 ---------------LPKSDF---KFLGQFCGTFIAVEKNNALYIIDQHAAHERILFEGL 465
Query: 249 QKTTLIKSQKLVVPQNLHL-TKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMS 307
+K +L SQ+L++P + ++ + I++ NL K GF S D G ++ ++P+
Sbjct: 466 KK-SLGPSQELLIPYRIETESEKDDEIIRLNLHELQKAGFNISEDKK--GLWIIRAVPIR 522
Query: 308 KNTTLGREDIEELLF--------MLQHTNSTEHCRPS 336
T +D++E L ++ H + CR +
Sbjct: 523 WQGT--EKDLKEDLAGAGKDPSGLMHHILARSACRAA 557
>gi|228474975|ref|ZP_04059703.1| DNA mismatch repair protein MutL [Staphylococcus hominis SK119]
gi|228270960|gb|EEK12348.1| DNA mismatch repair protein MutL [Staphylococcus hominis SK119]
Length = 674
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 84/393 (21%), Positives = 171/393 (43%), Gaps = 26/393 (6%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K + E YH +YP +NIEM VDVNV P K ++ + E+ L + I +
Sbjct: 265 KAITEGYHTLLTIGRYPICYINIEMDPILVDVNVHPTKLEVRLSKEEQLYNLIIEKIRHA 324
Query: 61 YAIGFTVDGNNMNQSMEQDP------SSDVDMEKIQRSNS---EEVEHETIPVPSEDN-- 109
+ + N+++++ +++ +D E+ Q++ S +++E++ P S +N
Sbjct: 325 FKDRILIPKNDLDRTPKKNKVLHTFEQQKIDFEQKQQNISNKIKQLENKNDPNVSTNNTF 384
Query: 110 SNFSHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTL-SLDIIQDQL-KAR 167
S S + + + + + +E V ++ + Y L SLD + + R
Sbjct: 385 STISSQYDEEHTSDDSYTREDNEHSSVYNNKRSMDKDYFDIQKDILNSLDRAESSIDNTR 444
Query: 168 YARRTVQAQDRCVENR-FHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVK 226
+ + D EN F N+ K ++ + +++ + + M++VGQ + +II +
Sbjct: 445 HDETNIYNYD---ENEDFQENVTNQKEQDIKGKVSSTPSRRV-PYMEVVGQVHGTYIIAQ 500
Query: 227 YDSDLFIIDQHATDEKYNFETLQKTTLIKS---QKLVVPQNLHLTKINQCILKDNLPVFY 283
++ +F+IDQHA E+ +E ++ S Q L++P H +K Q I+
Sbjct: 501 NENGMFMIDQHAAQERIKYEYFREKIGEVSNEVQDLLIPLTFHFSKDEQLIIDQYREELD 560
Query: 284 KNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFA 343
K G D ++ S P+ E I++++ ++ + + + A+
Sbjct: 561 KVGVHLEHFGGYD--YIVNSYPVWFPKVEAEEIIKDMIELVLNHKKIDVKKMREDAAIMM 618
Query: 344 SRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
S C+KS+ L EM L+ + + P+
Sbjct: 619 S--CKKSIKANHYLKKNEMADLIDQLREAEDPF 649
>gi|261380220|ref|ZP_05984793.1| DNA mismatch repair protein MutL [Neisseria subflava NJ9703]
gi|284797072|gb|EFC52419.1| DNA mismatch repair protein MutL [Neisseria subflava NJ9703]
Length = 658
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 95/405 (23%), Positives = 168/405 (41%), Gaps = 78/405 (19%)
Query: 1 MKLVNEVYHQ-FNNHQYPFIILNIEMSRDSVDVNVTPDKRQI-FMDHEK---LLLATVKV 55
+ V + Y +N P +L +++ ++VDVNV P K +I F D ++ L+ T+
Sbjct: 264 LHAVKQAYRDVLHNTLTPAFVLFLDLPPEAVDVNVHPTKTEIRFHDSQQVHQLVFHTLNK 323
Query: 56 HITDSYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETI-----PVPSEDNS 110
+ D+ A ++ +S+ SN+ EV H+ P+PSE+NS
Sbjct: 324 ALADTRA--------DLTESV---------------SNAGEVLHDITGVTPAPMPSENNS 360
Query: 111 N--FSHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLK--A 166
F +N P +PDT + P + R +LSL + + A
Sbjct: 361 ENLFDSASNY---PTGNKPDTRNAFGPSGKTAPMPYQASRAPQQRSLSLRESRAAMNTYA 417
Query: 167 RYARRT-------VQAQDRCVENRFHANIDP------SKNKEAESELNRVIKKSMFEKMK 213
++T Q + C N P S ++SEL + F +
Sbjct: 418 ELYKKTDDIDLELSQFEQACFGNMPSETPTPQTDTPLSDGLPSQSELPPL----GFAIAQ 473
Query: 214 IVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETL----QKTTLIKSQKLVVPQNLHLTK 269
++G + I+ + + L +ID HA E+ N+E + Q+ ++SQ+L++P +
Sbjct: 474 LLGIY----ILAQAEDSLLLIDMHAAAERVNYEKMKLQRQENGNLQSQRLLIPVTFAASH 529
Query: 270 INQCILKDNLPVFYKNGFEFSFDSSDDGNVL-LTSLPMSKNTTLGREDI----EELLFML 324
L D+ G E S GN L + ++P LG+ D+ +++L L
Sbjct: 530 EECASLADHAETLAGFGLEL---SDMGGNTLAVRAVP----AMLGKADVVSLAKDVLGEL 582
Query: 325 QHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
S++ + A+ +C SV GR L++ EM L+R+M
Sbjct: 583 AQVGSSQTIEEHE-NHILATMSCHGSVRAGRQLTLPEMNALLRDM 626
>gi|402302066|ref|ZP_10821186.1| DNA mismatch repair protein, C-terminal domain protein [Selenomonas
sp. FOBRC9]
gi|400381053|gb|EJP33857.1| DNA mismatch repair protein, C-terminal domain protein [Selenomonas
sp. FOBRC9]
Length = 621
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 86/383 (22%), Positives = 143/383 (37%), Gaps = 79/383 (20%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQI-FMDHEKLLLATVKVHITD 59
K ++ VY +P +L IE+ + ++DVNV P K ++ F D ++ A K
Sbjct: 268 KAIDNVYRALVPKMGFPLAVLRIEVPQRTIDVNVHPQKTEMKFEDEGRIFKAVYK----- 322
Query: 60 SYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQ 119
TV+G + E S + VE F +E+
Sbjct: 323 ------TVEGAVRGAAGETA------------SIAAAVE----------KPKFHYESMPL 354
Query: 120 QSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRC 179
+ P T P S P T + + Q A+R A R
Sbjct: 355 RMPATPPP---------------------ASVPHTYAPTAMPAQTVHEAAQRAASADLRS 393
Query: 180 VEN-----------RFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYD 228
V++ A P + AE I+ + +GQ +L +I+ +
Sbjct: 394 VQDIVGRARSEERAALMAEESPGAYR-AEPAPAGTIESGLIP----IGQVDLTYIVAQST 448
Query: 229 SDLFIIDQHATDEKYNFETLQKTT-LIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGF 287
L+IIDQHA E+ F+ I SQ+++V L +++N +F + GF
Sbjct: 449 RALYIIDQHAAHERILFDRFCALAEGIPSQQMLVHAILSFDARETQYIEENAELFSRLGF 508
Query: 288 EFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIR-AMFASRA 346
+ + D LT P T + I E+L L ++ P+++R A A+ A
Sbjct: 509 R--MEPAGDRAYRLTESPADVPTDEAEDVIREILVSLGELHA---ATPAQLRQAGLATMA 563
Query: 347 CRKSVMIGRALSVGEMTGLVRNM 369
CR ++ G LS +M L+ +
Sbjct: 564 CRAAIKAGEELSFRQMEILLEEL 586
>gi|335028886|ref|ZP_08522402.1| DNA mismatch repair protein [Streptococcus infantis SK1076]
gi|334270253|gb|EGL88659.1| DNA mismatch repair protein [Streptococcus infantis SK1076]
Length = 649
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 78/367 (21%), Positives = 158/367 (43%), Gaps = 39/367 (10%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMNQ 74
++P +++I++ DVNV P K+++ + E+ L+A V I S Q
Sbjct: 280 RFPLAVIHIQIDPYLADVNVHPTKQEVRISKERELMALVSEAIAKSLK----------EQ 329
Query: 75 SMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPDETI 134
++ D ++ I+ N E+VE T+P+ +N+ + +E N P+ E D +
Sbjct: 330 TLIPDALENLAKSTIR--NREKVEQTTLPL--RENTLY-YEKNEPTRPKQAE--VADHQV 382
Query: 135 EVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKNK 194
+ ++ L +++ LD I K +A R + D+ H +D +
Sbjct: 383 NLTEEKQDLNLFAKET------LDQITKPAKLHFAERKSVSYDQLD----HPELDLASLD 432
Query: 195 EAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL- 253
+A +L R + S F +++ GQ + ++ + L+IIDQHA E+ +E +++
Sbjct: 433 KAYDKLERE-ESSSFPELEFFGQMHGTYLFAQGRDGLYIIDQHAAQERVKYEEYRESIGN 491
Query: 254 --IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTT 311
Q+L+VP + LK+ +P+ + G + + +L P+
Sbjct: 492 VDQSQQQLLVPYIFEFPADDALRLKERMPLLEEVGVFLA--EYGENQFILREHPI----W 545
Query: 312 LGREDIEELLF-MLQHTNSTEHCRPSRIRAMFA-SRACRKSVMIGRALSVGEMTGLVRNM 369
+ E+IE ++ M T+ + RA A +C++S+ + L+ +
Sbjct: 546 MAEEEIESGIYEMCDMLLLTKEVSIKKYRAELAIMMSCKRSIKANHRIDDHSARQLLYQL 605
Query: 370 GRIDQPW 376
+ D P+
Sbjct: 606 SQCDNPY 612
>gi|443688702|gb|ELT91309.1| hypothetical protein CAPTEDRAFT_223782 [Capitella teleta]
Length = 1165
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 86/210 (40%), Gaps = 40/210 (19%)
Query: 201 NRVIKKSMFEKMKIVGQFNLGFIIVKYDSD------LFIIDQHATDEKYNFETL------ 248
N K M + ++++ Q + FI+ D++ + IIDQHA E+ E L
Sbjct: 922 NHSFTKDMLKSIEVINQVDGKFILCLMDTENQQGKCIVIIDQHAAHERVRLEQLIEDAHE 981
Query: 249 ---QKTTLIK----SQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLL 301
T +K S LVVP H ++ K + G E +FD SD V++
Sbjct: 982 NNSDGTKCLKCMAVSPALVVPLTQHAIRVLSAYPKQ----LKRIGVECTFDPSD--LVVV 1035
Query: 302 TSLPMSKNTT------LGREDI-----EELLF----MLQHTNSTEHCRPSRIRAMFASRA 346
T +P + GR D ELL +L T P I + A++A
Sbjct: 1036 TGIPACVQSRDENEKRRGRSDFLLKFTRELLMEQVDILTATVGANSALPKAILQVLAAKA 1095
Query: 347 CRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
C ++ G ++SV E LVR + D P+
Sbjct: 1096 CGGAIKFGDSISVNECERLVRGLQTCDLPF 1125
>gi|410665559|ref|YP_006917930.1| DNA mismatch repair protein [Simiduia agarivorans SA1 = DSM 21679]
gi|409027916|gb|AFV00201.1| DNA mismatch repair protein [Simiduia agarivorans SA1 = DSM 21679]
Length = 617
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 83/162 (51%), Gaps = 14/162 (8%)
Query: 215 VGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKT---TLIKSQKLVVPQNLHLTKIN 271
+ Q +I+ + L ++D HA E+ +E ++ +++Q L+VP+++ +++
Sbjct: 431 IAQLKGVYILAENAQGLVVVDAHAAHERITYERMKAAFDAEGLRAQPLLVPESIPVSEKE 490
Query: 272 QCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTE 331
+ +++ +F N F + + +L+ +P+ LG+ +E+L+ + ++ +E
Sbjct: 491 ADLAEEHAQIF--NNLGFGIERAGPETLLIRQIPV----ILGQARVEQLVRDVL-SDLSE 543
Query: 332 HCRPSRIR----AMFASRACRKSVMIGRALSVGEMTGLVRNM 369
H RIR + A+ AC SV R L++ EM L+R+M
Sbjct: 544 HGSSERIRHHINEILATMACHGSVRANRKLTIPEMNALLRDM 585
>gi|293366739|ref|ZP_06613415.1| DNA mismatch repair protein HexB [Staphylococcus epidermidis
M23864:W2(grey)]
gi|417909814|ref|ZP_12553547.1| DNA mismatch repair protein, C-terminal domain protein
[Staphylococcus epidermidis VCU037]
gi|418605351|ref|ZP_13168676.1| DNA mismatch repair protein [Staphylococcus epidermidis VCU041]
gi|418616768|ref|ZP_13179692.1| DNA mismatch repair protein [Staphylococcus epidermidis VCU120]
gi|418624388|ref|ZP_13187063.1| DNA mismatch repair protein [Staphylococcus epidermidis VCU125]
gi|418628487|ref|ZP_13191032.1| DNA mismatch repair protein [Staphylococcus epidermidis VCU127]
gi|419768103|ref|ZP_14294240.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
IS-250]
gi|419770905|ref|ZP_14296967.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
IS-K]
gi|420197186|ref|ZP_14702910.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM020]
gi|420214223|ref|ZP_14719502.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIH05005]
gi|420216055|ref|ZP_14721277.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIH05001]
gi|420227087|ref|ZP_14731860.1| DNA mismatch repair protein [Staphylococcus epidermidis NIH05003]
gi|420231768|ref|ZP_14736413.1| DNA mismatch repair protein [Staphylococcus epidermidis NIH051668]
gi|291319040|gb|EFE59410.1| DNA mismatch repair protein HexB [Staphylococcus epidermidis
M23864:W2(grey)]
gi|341652423|gb|EGS76211.1| DNA mismatch repair protein, C-terminal domain protein
[Staphylococcus epidermidis VCU037]
gi|374402448|gb|EHQ73473.1| DNA mismatch repair protein [Staphylococcus epidermidis VCU041]
gi|374820846|gb|EHR84922.1| DNA mismatch repair protein [Staphylococcus epidermidis VCU120]
gi|374827617|gb|EHR91478.1| DNA mismatch repair protein [Staphylococcus epidermidis VCU125]
gi|374837333|gb|EHS00899.1| DNA mismatch repair protein [Staphylococcus epidermidis VCU127]
gi|383361024|gb|EID38407.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
IS-250]
gi|383362454|gb|EID39806.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
IS-K]
gi|394265993|gb|EJE10639.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM020]
gi|394283588|gb|EJE27753.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIH05005]
gi|394292505|gb|EJE36247.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIH05001]
gi|394297588|gb|EJE41185.1| DNA mismatch repair protein [Staphylococcus epidermidis NIH05003]
gi|394302310|gb|EJE45758.1| DNA mismatch repair protein [Staphylococcus epidermidis NIH051668]
Length = 645
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 160/387 (41%), Gaps = 43/387 (11%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K + E YH ++P +NI+M VDVNV P K ++ + E L + I ++
Sbjct: 265 KAILEGYHTLLTIGRFPICYINIQMDPILVDVNVHPTKLEVRLSKEDQLYDLIVTKIREA 324
Query: 61 YAIGFTVDGNNMNQS------MEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNF-S 113
+ + N++N + +E ++ EK Q+S E + + N + S
Sbjct: 325 FKDKILIPQNDLNHAPKKNKVLETFEQQKINFEK-QQSQIGETSAPYVHDQKDKNHDVES 383
Query: 114 HEANLQQSPETVEPDTPDETIEVIDDMPR-LQGSYRQSTPVTLSLDIIQDQLKARYARRT 172
H+ NL + T +E+ EV +++ + SY QS L D+ Q+ Y
Sbjct: 384 HKNNLDSTS-----STNNESTEVSNELHNYIDDSYLQSQKEVL-FDMEQNT-SNEYEISN 436
Query: 173 VQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLF 232
Q+ D K +++ RV M+IVGQ + +II + ++ +F
Sbjct: 437 QQSND-------------IKGTVSQTPHRRV------PYMEIVGQVHGTYIIAQNENGMF 477
Query: 233 IIDQHATDEKYNFETLQKT---TLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEF 289
+IDQHA E+ +E ++ + Q L++P H +K Q I+ K G
Sbjct: 478 MIDQHAAQERIKYEYFREKIGEVTNEVQNLLIPLTFHFSKDEQMIIDQYKDELDKVGVHL 537
Query: 290 SFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRK 349
D ++ S P+ E I++++ ++ S + + A+ S C+K
Sbjct: 538 EHFGGHD--YIVNSYPVWFPKEEAEEIIKDMIELVLKHKSVDVKKIREDAAIMMS--CKK 593
Query: 350 SVMIGRALSVGEMTGLVRNMGRIDQPW 376
S+ L EM L+ + + P+
Sbjct: 594 SIKANHYLKNNEMADLIDQLREAEDPF 620
>gi|417546687|ref|ZP_12197773.1| DNA mismatch repair protein, C-terminal domain protein
[Acinetobacter baumannii OIFC032]
gi|417550197|ref|ZP_12201277.1| DNA mismatch repair protein MutL [Acinetobacter baumannii Naval-18]
gi|417567336|ref|ZP_12218208.1| DNA mismatch repair protein, C-terminal domain protein
[Acinetobacter baumannii OIFC143]
gi|421668034|ref|ZP_16108076.1| DNA mismatch repair protein, C-terminal domain protein
[Acinetobacter baumannii OIFC087]
gi|421671297|ref|ZP_16111273.1| DNA mismatch repair protein, C-terminal domain protein
[Acinetobacter baumannii OIFC099]
gi|395553008|gb|EJG19016.1| DNA mismatch repair protein, C-terminal domain protein
[Acinetobacter baumannii OIFC143]
gi|400384575|gb|EJP43253.1| DNA mismatch repair protein, C-terminal domain protein
[Acinetobacter baumannii OIFC032]
gi|400388165|gb|EJP51238.1| DNA mismatch repair protein MutL [Acinetobacter baumannii Naval-18]
gi|410381011|gb|EKP33585.1| DNA mismatch repair protein, C-terminal domain protein
[Acinetobacter baumannii OIFC087]
gi|410382614|gb|EKP35159.1| DNA mismatch repair protein, C-terminal domain protein
[Acinetobacter baumannii OIFC099]
Length = 650
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 154/372 (41%), Gaps = 54/372 (14%)
Query: 11 FNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGN 70
+ HQ+ +L +E+ +++DVNV P K +I +++ + V+ + ++ A F
Sbjct: 288 LHGHQHSSYLLFLEVDPENIDVNVHPTKHEIRFLNQREVHEFVRHYAKETLA-QFQTASA 346
Query: 71 NMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETV--EPD 128
++ Q+M+ D + ++ ++ + + H T Q+ +T +P+
Sbjct: 347 DLAQAMKVDDTQNLSVQPQPKYQEQFTLHRTA-----------------QAADTAVDKPN 389
Query: 129 TPDETIEVIDDM--PRLQG-SYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFH 185
+ E++ D R Q Y + TP + + LK A Q + V+
Sbjct: 390 GYQPSTELLTDFNNSRPQAVHYAEQTPKYNGSAQLNNALKTYLAPLRDQPANFSVDE--- 446
Query: 186 ANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNF 245
NI+P V K F + Q + +I+ + L I+D HA E+
Sbjct: 447 -NIEP------------VAKVDEFPLGIAIAQLHGIYILAQNTEGLIIVDMHAAHERILL 493
Query: 246 ETLQ----KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLL 301
+ ++ K SQ+L++P+ + ++++ ++D P + G E D D V++
Sbjct: 494 QQMKNAWDKPEFWTSQQLLIPKVISISRMQAVRVEDLKPQLERLGLE--IDLYGDEQVIV 551
Query: 302 TSLPMSKNTTLGREDIE----ELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRAL 357
+P L + D E ELL L + + R + A AC +V R L
Sbjct: 552 RGVP----AILQKADFENLIPELLNDLDPNDEAQGLLQKR-DELLAGMACHGAVRAHRQL 606
Query: 358 SVGEMTGLVRNM 369
S+ EM L+R M
Sbjct: 607 SLSEMNALLRQM 618
>gi|219851577|ref|YP_002466009.1| DNA mismatch repair protein [Methanosphaerula palustris E1-9c]
gi|219545836|gb|ACL16286.1| DNA mismatch repair protein MutL [Methanosphaerula palustris E1-9c]
Length = 603
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 87/176 (49%), Gaps = 15/176 (8%)
Query: 207 SMFEKMKIVGQFNLGFIIVKY-DSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNL 265
S +M+++GQ ++I + D L +IDQHA E+ ++ +++ +++Q+L+ P L
Sbjct: 413 SNLPEMRVLGQVANTYLIAETPDQTLCLIDQHAAHERILYDQIRRNRTVQTQELITPVLL 472
Query: 266 HLTKINQCILKDNLPVFYKNGF---EFSFDSSDDGNVLLTSLPMSKNTTLGR-EDIEELL 321
+T +++ P+F + GF EF DS ++++P+ GR ED E++
Sbjct: 473 TVTLQEAEAIREATPIFEREGFRIEEFGRDS-----FAVSAVPV----IFGRIEDPEQVR 523
Query: 322 FMLQHTNSTEHCRPSRIRAMFASR-ACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
++ E + R SR ACR +V G AL+ + L+ + + P+
Sbjct: 524 EIIAGVIGEEPGDQTATRNAITSRVACRGAVKAGAALTNEQGEQLLAQLAATEDPF 579
>gi|293376441|ref|ZP_06622673.1| DNA mismatch repair protein, C-terminal domain protein
[Turicibacter sanguinis PC909]
gi|325845058|ref|ZP_08168374.1| DNA mismatch repair protein MutL [Turicibacter sp. HGF1]
gi|292644950|gb|EFF63028.1| DNA mismatch repair protein, C-terminal domain protein
[Turicibacter sanguinis PC909]
gi|325488934|gb|EGC91327.1| DNA mismatch repair protein MutL [Turicibacter sp. HGF1]
Length = 609
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 74/385 (19%), Positives = 165/385 (42%), Gaps = 73/385 (18%)
Query: 1 MKLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITD 59
M+ + E YH +YP ++LN+++ VDVNV P K ++ E+ L T H
Sbjct: 264 MRSIIEAYHTLLPKDKYPIVVLNLKLDPILVDVNVHPAKLEVRFSQEESL-KTFIYH--- 319
Query: 60 SYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQ 119
+ N+ + +E P + ++ K+ +P P + + + EA +
Sbjct: 320 --------ELRNVLKQVEYIPETQIEEPKV-----------VMPKPIQQTLSLTKEATFK 360
Query: 120 QSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTL---SLDIIQDQLKARYARRTVQAQ 176
P ++++D+ P+ L S+D+ ++ + + +
Sbjct: 361 ----------PTIAVQMVDE-----------NPIELKKESVDVKKESVHVEEVAEPMVSL 399
Query: 177 DRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQ 236
++ ++ F + P++ + EL+ + GQ + +++ + + LFI+DQ
Sbjct: 400 EQPAQD-FKVVV-PTRQAIPQLELHYI------------GQLHGTYLLAQNEEGLFIVDQ 445
Query: 237 HATDEKYNFETLQKTTLIKSQK-----LVVPQNLHLTKINQCILKDNLPVFYKNGFEFSF 291
HA E+ +E + L+K K L++P L + +LK++LP K GFE
Sbjct: 446 HAAMERIQYE--KNYALLKDVKGDCIELIIPMVLKYSANELLLLKESLPSLMKFGFE--I 501
Query: 292 DSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSV 351
+ ++++ ++P+ + +E +L + + N + + A+ S C+ S+
Sbjct: 502 EEFGGQSLVVRTIPVWVQNLDAKLIVETILQQIIYDNKVDIGKLRESVAIMMS--CKGSI 559
Query: 352 MIGRALSVGEMTGLVRNMGRIDQPW 376
+ ++ E+ ++ ++ DQP+
Sbjct: 560 KANQYINEHEIKQMLVDLCLCDQPY 584
>gi|420182966|ref|ZP_14689099.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM049]
gi|394249429|gb|EJD94642.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM049]
Length = 645
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 160/387 (41%), Gaps = 43/387 (11%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K + E YH ++P +NI+M VDVNV P K ++ + E L + I ++
Sbjct: 265 KAILEGYHTLLTIGRFPICYINIQMDPILVDVNVHPTKLEVRLSKEDQLYDLIVTKIREA 324
Query: 61 YAIGFTVDGNNMNQS------MEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNF-S 113
+ + N++N + +E ++ EK Q+S E + + N + S
Sbjct: 325 FKDKILIPQNDLNHAPKKNKVLETFEQQKINFEK-QQSQIGETSAPYVHDQKDKNHDVES 383
Query: 114 HEANLQQSPETVEPDTPDETIEVIDDMPR-LQGSYRQSTPVTLSLDIIQDQLKARYARRT 172
H+ NL + T +E+ EV +++ + SY QS L D+ Q+ Y
Sbjct: 384 HKNNLDSTS-----STNNESTEVSNELHNYIDDSYLQSQKEVL-FDMEQNT-SNEYEISN 436
Query: 173 VQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLF 232
Q+ D K +++ RV M+IVGQ + +II + ++ +F
Sbjct: 437 PQSND-------------IKGTVSQTPHRRV------PYMEIVGQVHGTYIIAQNENGMF 477
Query: 233 IIDQHATDEKYNFETLQKT---TLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEF 289
+IDQHA E+ +E ++ + Q L++P H +K Q I+ K G
Sbjct: 478 MIDQHAAQERIKYEYFREKIGEVTNEVQNLLIPLTFHFSKDEQMIIDQYKDELDKVGVHL 537
Query: 290 SFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRK 349
D ++ S P+ E I++++ ++ S + + A+ S C+K
Sbjct: 538 EHFGGHD--YIVNSYPVWFPKEEAEEIIKDMIELVLKHKSVDVKKIREDAAIMMS--CKK 593
Query: 350 SVMIGRALSVGEMTGLVRNMGRIDQPW 376
S+ L EM L+ + + P+
Sbjct: 594 SIKANHYLKNNEMADLIDQLREAEDPF 620
>gi|421907159|ref|ZP_16337044.1| DNA mismatch repair protein mutL [Neisseria meningitidis alpha704]
gi|393291676|emb|CCI73030.1| DNA mismatch repair protein mutL [Neisseria meningitidis alpha704]
Length = 658
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 94/396 (23%), Positives = 168/396 (42%), Gaps = 60/396 (15%)
Query: 1 MKLVNEVYHQ-FNNHQYPFIILNIEMSRDSVDVNVTPDKRQI-FMDHEKLLLATVKVHIT 58
+ V + Y +N P +L +++ ++VDVNV P K +I F D ++ VH
Sbjct: 264 LHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSQQ-------VHQL 316
Query: 59 DSYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETI-----PVPSEDNSN-- 111
+A +N+++ D +D+ E + SN+ EV H+ P+PSE+NS
Sbjct: 317 VFHA---------LNKAL-ADTRADL-TESV--SNAGEVLHDITGVTPAPMPSENNSENL 363
Query: 112 FSHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARR 171
F +N P +PD + + P + R +LSL + + YA
Sbjct: 364 FDRASNY---PTGNKPDIRNAFVSSGKTAPMPYQAARAPQQHSLSLRESRAAMNT-YAEL 419
Query: 172 TVQAQDRCVE------NRFHANIDPSKNKEAESEL---NRVIKKSMFEKMKIVGQFNLG- 221
+ D +E RF N+ PS+ ++++ + + S + LG
Sbjct: 420 YKKTDDIDLELSQFEQARF-GNM-PSETPAQKTDMPLSDGIPSPSELPPLGFAIAQLLGI 477
Query: 222 FIIVKYDSDLFIIDQHATDEKYNFETL----QKTTLIKSQKLVVPQNLHLTKINQCILKD 277
+I+ + + L +ID HA E+ N+E + Q+ ++SQ+L++P + L D
Sbjct: 478 YILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGKLQSQRLLIPVTFAASHEECAALAD 537
Query: 278 NLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDI----EELLFMLQHTNSTEHC 333
G E S GN L + LG+ D+ +++L S++
Sbjct: 538 YAETLAGFGLEL---SDMGGNTLAAC---AAPAMLGKSDVVSLAKDVLNEFAQVGSSQTI 591
Query: 334 RPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
R + A+ +C S+ GR L++ EM L+R+M
Sbjct: 592 EEHENR-ILATMSCHGSIRAGRRLTLPEMNALLRDM 626
>gi|406978854|gb|EKE00738.1| hypothetical protein ACD_21C00284G0003 [uncultured bacterium]
Length = 598
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 84/165 (50%), Gaps = 20/165 (12%)
Query: 215 VGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQK---TTLIKSQKLVVPQNLHL--TK 269
+ Q + +I+ + L ++D HA E+ N+E L+ T I SQ +++P + L T+
Sbjct: 412 LAQLHNIYILAQNADGLILVDAHAAHERINYEKLKAAYDTAGIASQIMLLPLTVSLNQTE 471
Query: 270 INQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLF-----ML 324
IN CI + NL + K GF+ + S VL+ ++P+ L D+E+L+ +L
Sbjct: 472 IN-CI-ESNLEILRKLGFDVT--RSGPEKVLIRAVPV----LLQDADVEQLIRDIVADLL 523
Query: 325 QHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
H + + I + ++ AC SV GR L++ EM L+R +
Sbjct: 524 THESFDSIVKS--ISKILSTMACHSSVRAGRKLNINEMNALLREL 566
>gi|445405368|ref|ZP_21431345.1| DNA mismatch repair protein, C-terminal domain protein
[Acinetobacter baumannii Naval-57]
gi|444782118|gb|ELX06029.1| DNA mismatch repair protein, C-terminal domain protein
[Acinetobacter baumannii Naval-57]
Length = 650
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 154/372 (41%), Gaps = 54/372 (14%)
Query: 11 FNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGN 70
+ HQ+ +L +E+ +++DVNV P K +I +++ + V+ + ++ A F
Sbjct: 288 LHGHQHSSYLLFLEVDPENIDVNVHPTKHEIRFLNQREVHEFVRHYAKETLA-QFQTASA 346
Query: 71 NMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETV--EPD 128
++ Q+M+ D + ++ ++ + + H T Q+ +T +P+
Sbjct: 347 DLAQAMKVDDTQNLSVQPQPKYQEQFTLHRTA-----------------QAADTAVDKPN 389
Query: 129 TPDETIEVIDDM--PRLQG-SYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFH 185
+ E++ D R Q Y + TP + + LK A Q + V+
Sbjct: 390 GYQPSTELLTDFSNSRPQAVHYAEQTPKYNGSAQLNNALKTYLAPLRDQPANFSVDE--- 446
Query: 186 ANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNF 245
NI+P V K F + Q + +I+ + L I+D HA E+
Sbjct: 447 -NIEP------------VAKVDEFPLGIAIAQLHGIYILAQNTEGLIIVDMHAAHERILL 493
Query: 246 ETLQ----KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLL 301
+ ++ K SQ+L++P+ + ++++ ++D P + G E D D V++
Sbjct: 494 QQMKNAWDKPEFWTSQQLLIPKVISISRMQAVRVEDLKPQLERLGLE--IDLYGDEQVIV 551
Query: 302 TSLPMSKNTTLGREDIE----ELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRAL 357
+P L + D E ELL L + + R + A AC +V R L
Sbjct: 552 RGVP----AILQKADFENLIPELLNDLDPNDEAQGLLQKR-DELLAGMACHGAVRAHRQL 606
Query: 358 SVGEMTGLVRNM 369
S+ EM L+R M
Sbjct: 607 SLSEMNALLRQM 618
>gi|417910738|ref|ZP_12554454.1| DNA mismatch repair protein, C-terminal domain protein
[Staphylococcus epidermidis VCU105]
gi|418622025|ref|ZP_13184781.1| DNA mismatch repair protein [Staphylococcus epidermidis VCU123]
gi|420187498|ref|ZP_14693518.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM039]
gi|420212649|ref|ZP_14717997.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM001]
gi|341654926|gb|EGS78662.1| DNA mismatch repair protein, C-terminal domain protein
[Staphylococcus epidermidis VCU105]
gi|374827400|gb|EHR91262.1| DNA mismatch repair protein [Staphylococcus epidermidis VCU123]
gi|394255940|gb|EJE00876.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM039]
gi|394279610|gb|EJE23916.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM001]
Length = 645
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 160/387 (41%), Gaps = 43/387 (11%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K + E YH ++P +NI+M VDVNV P K ++ + E L + I ++
Sbjct: 265 KAILEGYHTLLTIGRFPICYINIQMDPILVDVNVHPTKLEVRLSKEDQLYDLIVTKIREA 324
Query: 61 YAIGFTVDGNNMNQS------MEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNF-S 113
+ + N++N + +E ++ EK Q+S E + + N + S
Sbjct: 325 FKDKILIPQNDLNHAPKKNKVLETFEQQKINFEK-QQSQIGETSAPYVHDQKDKNHDVES 383
Query: 114 HEANLQQSPETVEPDTPDETIEVIDDMP-RLQGSYRQSTPVTLSLDIIQDQLKARYARRT 172
H+ NL + T +E+ EV +++ + SY QS L D+ Q+ Y
Sbjct: 384 HKNNLDSTS-----STNNESTEVSNELHNHIDDSYLQSQKEVL-FDMEQNT-SNEYEILN 436
Query: 173 VQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLF 232
Q+ D K +++ RV M+IVGQ + +II + ++ +F
Sbjct: 437 QQSND-------------IKGTVSQTPHRRV------PYMEIVGQVHGTYIIAQNENGMF 477
Query: 233 IIDQHATDEKYNFETLQKT---TLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEF 289
+IDQHA E+ +E ++ + Q L++P H +K Q I+ K G
Sbjct: 478 MIDQHAAQERIKYEYFREKIGEVTNEVQNLLIPLTFHFSKDEQMIIDQYKDELDKVGVHL 537
Query: 290 SFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRK 349
D ++ S P+ E I++++ ++ S + + A+ S C+K
Sbjct: 538 EHFGGHD--YIVNSYPVWFPKEEAEEIIKDMIELVLKHKSVDVKKIREDAAIMMS--CKK 593
Query: 350 SVMIGRALSVGEMTGLVRNMGRIDQPW 376
S+ L EM L+ + + P+
Sbjct: 594 SIKANHYLKNNEMADLIDQLREAEDPF 620
>gi|424059500|ref|ZP_17796991.1| DNA mismatch repair protein MutL [Acinetobacter baumannii Ab33333]
gi|404670238|gb|EKB38130.1| DNA mismatch repair protein MutL [Acinetobacter baumannii Ab33333]
Length = 650
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 154/372 (41%), Gaps = 54/372 (14%)
Query: 11 FNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGN 70
+ HQ+ +L +E+ +++DVNV P K +I +++ + V+ + ++ A F
Sbjct: 288 LHGHQHSSYLLFLEVDPENIDVNVHPTKHEIRFLNQREVHEFVRHYAKETLA-QFQTASA 346
Query: 71 NMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETV--EPD 128
++ Q+M+ D + ++ ++ + + H T Q+ +T +P+
Sbjct: 347 DLAQAMKVDDTQNLSVQPQPKYQEQFTLHRTA-----------------QAADTAVDKPN 389
Query: 129 TPDETIEVIDDM--PRLQG-SYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFH 185
+ E++ D R Q Y + TP + + LK A Q + V+
Sbjct: 390 GYQPSTELLTDFNNSRPQAVHYAEQTPKYNGSAQLNNALKTYLAPLRDQPTNFSVDE--- 446
Query: 186 ANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNF 245
NI+P V K F + Q + +I+ + L I+D HA E+
Sbjct: 447 -NIEP------------VAKVDEFPLGIAIAQLHGIYILAQNTEGLIIVDMHAAHERILL 493
Query: 246 ETLQ----KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLL 301
+ ++ K SQ+L++P+ + ++++ ++D P + G E D D V++
Sbjct: 494 QQMKNAWDKPEFWTSQQLLIPKVISISRMQAVRVEDLKPQLERLGLE--IDLYGDEQVIV 551
Query: 302 TSLPMSKNTTLGREDIE----ELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRAL 357
+P L + D E ELL L + + R + A AC +V R L
Sbjct: 552 RGVP----AILQKADFENLIPELLNDLDPNDEAQGLLQKR-DELLAGMACHGAVRAHRQL 606
Query: 358 SVGEMTGLVRNM 369
S+ EM L+R M
Sbjct: 607 SLSEMNALLRQM 618
>gi|239501497|ref|ZP_04660807.1| DNA mismatch repair ATPase [Acinetobacter baumannii AB900]
gi|421679698|ref|ZP_16119567.1| DNA mismatch repair protein, C-terminal domain protein
[Acinetobacter baumannii OIFC111]
gi|410390874|gb|EKP43254.1| DNA mismatch repair protein, C-terminal domain protein
[Acinetobacter baumannii OIFC111]
Length = 650
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 154/372 (41%), Gaps = 54/372 (14%)
Query: 11 FNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGN 70
+ HQ+ +L +E+ +++DVNV P K +I +++ + V+ + ++ A F
Sbjct: 288 LHGHQHSSYLLFLEVDPENIDVNVHPTKHEIRFLNQREVHEFVRHYAKETLA-QFQTASA 346
Query: 71 NMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETV--EPD 128
++ Q+M+ D + ++ ++ + + H T Q+ +T +P+
Sbjct: 347 DLAQAMKVDDTQNLSVQPQPKYQEQFTLHRTA-----------------QAADTAVDKPN 389
Query: 129 TPDETIEVIDDM--PRLQG-SYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFH 185
+ E++ D R Q Y + TP + + LK A Q + V+
Sbjct: 390 GYQPSTELLTDFNNSRPQAVHYAEQTPKYNGSAQLNNALKTYLAPLRDQPTNFSVDE--- 446
Query: 186 ANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNF 245
NI+P V K F + Q + +I+ + L I+D HA E+
Sbjct: 447 -NIEP------------VAKVDEFPLGIAIAQLHGIYILAQNTEGLIIVDMHAAHERILL 493
Query: 246 ETLQ----KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLL 301
+ ++ K SQ+L++P+ + ++++ ++D P + G E D D V++
Sbjct: 494 QQMKNAWDKPEFWTSQQLLIPKVISISRMQAVRVEDLKPQLERLGLE--IDLYGDEQVIV 551
Query: 302 TSLPMSKNTTLGREDIE----ELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRAL 357
+P L + D E ELL L + + R + A AC +V R L
Sbjct: 552 RGVP----AILQKADFENLIPELLNDLDPNDEAQGLLQKR-DELLAGMACHGAVRAHRQL 606
Query: 358 SVGEMTGLVRNM 369
S+ EM L+R M
Sbjct: 607 SLSEMNALLRQM 618
>gi|420218837|ref|ZP_14723887.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIH04008]
gi|394291582|gb|EJE35380.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIH04008]
Length = 645
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 160/387 (41%), Gaps = 43/387 (11%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K + E YH ++P +NI+M VDVNV P K ++ + E L + I ++
Sbjct: 265 KAILEGYHTLLTIGRFPICYINIQMDPILVDVNVHPTKLEVRLSKEDQLYDLIVTKIREA 324
Query: 61 YAIGFTVDGNNMNQS------MEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNF-S 113
+ + N++N + +E ++ EK Q+S E + + N + S
Sbjct: 325 FQDKILIPQNDLNHAPKKNKVLETFEQQKINFEK-QQSQIGETSAPYVHDQKDKNHDVES 383
Query: 114 HEANLQQSPETVEPDTPDETIEVIDDMPR-LQGSYRQSTPVTLSLDIIQDQLKARYARRT 172
H+ NL + T +E+ EV +++ + SY QS L D+ Q+ Y
Sbjct: 384 HKNNLDSTS-----STNNESTEVSNELHNYIDDSYLQSQKEVL-FDMEQNT-SNEYEISN 436
Query: 173 VQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLF 232
Q+ D K +++ RV M+IVGQ + +II + ++ +F
Sbjct: 437 QQSND-------------IKGTVSQTPHRRV------PYMEIVGQVHGTYIIAQNENGMF 477
Query: 233 IIDQHATDEKYNFETLQKT---TLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEF 289
+IDQHA E+ +E ++ + Q L++P H +K Q I+ K G
Sbjct: 478 MIDQHAAQERIKYEYFREKIGEVTNEMQNLLIPLTFHFSKDEQMIIDQYKDELDKVGVHL 537
Query: 290 SFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRK 349
D ++ S P+ E I++++ ++ S + + A+ S C+K
Sbjct: 538 EHFGGHD--YIVNSYPVWFPKEEAEEIIKDMIELVLKHKSVDVKKIREDAAIMMS--CKK 593
Query: 350 SVMIGRALSVGEMTGLVRNMGRIDQPW 376
S+ L EM L+ + + P+
Sbjct: 594 SIKANHYLKNNEMADLIDQLREAEDPF 620
>gi|379012062|ref|YP_005269874.1| DNA mismatch repair protein MutL [Acetobacterium woodii DSM 1030]
gi|375302851|gb|AFA48985.1| DNA mismatch repair protein MutL [Acetobacterium woodii DSM 1030]
Length = 694
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 85/412 (20%), Positives = 187/412 (45%), Gaps = 48/412 (11%)
Query: 4 VNEVYHQFN-NHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYA 62
++E Y + HQ+P I+ IE+ +DVN+ P K +I + +E L+ K I ++
Sbjct: 267 LDEAYEGYCMKHQHPMGIIFIELPGRMLDVNIHPAKTEIKILNESLVCLLFKQGIRETLR 326
Query: 63 -IGFTVD-GNNMNQS--MEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANL 118
VD G Q+ + ++ S+ + EK Q + E ++ ++ +E + + ++++
Sbjct: 327 NANLIVDVGGEATQTETLTENKSAAIQTEKAQ--HREAIDRDSATKNNERSDHLENDSSD 384
Query: 119 QQSPETVEPDTPDETIEVIDDMPRLQG-SYRQSTPVTLSLDIIQDQLKARYA-------- 169
Q + E V+ T E ++ + G ++ P+ +D+++ +
Sbjct: 385 QITFENVDNTTALEALK-----KSVSGEKHKLKQPLNQRVDLVKPHPDFDHCFEETDLEN 439
Query: 170 RRTVQAQDRCVEN-------------RFHANIDPSKNKEAESELN--RVIKKSM--FEKM 212
++T + V N H N + E ++E N R +KK + KM
Sbjct: 440 KKTTMIEINKVNNDKNSSEKKPNDTLSNHNNRIAEERSEFQAETNNPRPMKKRVEDLVKM 499
Query: 213 KIVGQFNLGFIIVKYDSDLFIIDQHATDEKY----NFETLQKTTLIKSQKLVVPQNLHLT 268
KIVGQ +I+++ + +++++DQHA E + + + + SQ L+ L
Sbjct: 500 KIVGQLFNVYILLEGEKEIYLLDQHAAHEAFLTKELLDIFDRGEGLPSQGLMTADALKFH 559
Query: 269 KINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPM----SKNTTLGREDIEELLFML 324
+ ++ L + K GF+ +D +L+ S+P+ ++ L ++ I+E +F+
Sbjct: 560 PKDLEQVEAKLEDYRKLGFDCDIFGAD--TLLVRSVPVLLGEPQSADLLKKMIDENIFIN 617
Query: 325 QHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+ ++ +++ S AC+ ++ G+ L+ E+ L+ N+ ++ P+
Sbjct: 618 DDESLSKSMFSKKMKNKIISMACKAAIKGGQPLTQREIKKLLENLMALENPY 669
>gi|317131678|ref|YP_004090992.1| DNA mismatch repair protein MutL [Ethanoligenens harbinense YUAN-3]
gi|315469657|gb|ADU26261.1| DNA mismatch repair protein MutL [Ethanoligenens harbinense YUAN-3]
Length = 669
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 68/143 (47%), Gaps = 4/143 (2%)
Query: 212 MKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKIN 271
+++VGQ +I+V+ L++ID+HA E+ +E ++K Q L+ P+ + L +
Sbjct: 485 LRVVGQCFETYILVEEGDALYLIDKHAAHERILYEEIKKQGQAAGQLLLAPRAVTLAREE 544
Query: 272 QCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTE 331
+ +N + + GF+ + VL+ S P+ + +EEL L +
Sbjct: 545 YAAVLENFALLRETGFD--MEDFGGATVLVRSAPVYLRESEIVPAVEELAGKL--AGFGK 600
Query: 332 HCRPSRIRAMFASRACRKSVMIG 354
P RI ++ S ACR +V G
Sbjct: 601 DLTPERIDELYHSVACRAAVKAG 623
>gi|448303532|ref|ZP_21493481.1| DNA mismatch repair protein MutL [Natronorubrum sulfidifaciens JCM
14089]
gi|445593317|gb|ELY47495.1| DNA mismatch repair protein MutL [Natronorubrum sulfidifaciens JCM
14089]
Length = 721
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 92/210 (43%), Gaps = 21/210 (10%)
Query: 186 ANIDPSKNKEAESELNR------------VIKKSMFEKM---KIVGQFNLGFIIVKYDSD 230
A++D S+N+E + + + ++ F+ + +++GQ+ +++ +
Sbjct: 484 ASLDSSRNREPGRKFDAGTEQRTLAGDVATVDETAFDSLPSLRVLGQYTDTYLVCETADG 543
Query: 231 LFIIDQHATDEKYNFETLQKTTLIK--SQKLVVPQNLHLTKINQCILKDNLPVFYKNGFE 288
L +IDQHA DE+ N+E L++ + +Q L P +L LT + + + G
Sbjct: 544 LVLIDQHAADERVNYERLKRAFADEPAAQALASPVDLELTAVEAEAFESYREALSRLG-- 601
Query: 289 FSFDSSDDGNVLLTSLPMSKNTTLGREDIEELL--FMLQHTNSTEHCRPSRIRAMFASRA 346
F D DD V +T++P TL E + ++L F+ + + A
Sbjct: 602 FYADRVDDRTVAVTTVPAVLEETLEPEQLRDVLASFVEGDRKTGAETVDALADEFLGDLA 661
Query: 347 CRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
C S+ +L+ G + L+ + + P+
Sbjct: 662 CYPSITGNTSLTEGSVVDLLEALDDCENPY 691
>gi|389844992|ref|YP_006347072.1| DNA mismatch repair protein MutL [Mesotoga prima MesG1.Ag.4.2]
gi|387859738|gb|AFK07829.1| DNA mismatch repair protein MutL [Mesotoga prima MesG1.Ag.4.2]
Length = 598
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 79/169 (46%), Gaps = 9/169 (5%)
Query: 205 KKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQN 264
+KS K+ +G F ++I + + L +IDQHA E+ FETL+++ I Q L++P
Sbjct: 410 EKSGEGKVSFIGVFGERYLIAESEDGLLLIDQHAAHERIIFETLKESKRIAPQNLLMPLE 469
Query: 265 LHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFML 324
L+L + ++ K GF F F + +++ S+P +G E + ++L +
Sbjct: 470 LNLERSRMDLVIAREETLKKLGFTFDFVND---KIIMVSIPQ----VMGVEGVVDVLEEI 522
Query: 325 QHTNSTEHCRPSR--IRAMFASRACRKSVMIGRALSVGEMTGLVRNMGR 371
E + + AS AC+ ++ G L +G+ L + R
Sbjct: 523 LDEMRLEGLEDPKTVFDNLLASIACKAAIRTGNRLDIGQAEELFEELRR 571
>gi|421894543|ref|ZP_16325031.1| DNA mismatch repair MutL family protein [Pediococcus pentosaceus
IE-3]
gi|385272633|emb|CCG90403.1| DNA mismatch repair MutL family protein [Pediococcus pentosaceus
IE-3]
Length = 645
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 117/281 (41%), Gaps = 44/281 (15%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLL----ATVKVHITDSYAIGFTVDGN 70
+YP +LNI+ VDVNV P K+++ + E+ LL V + D I VD
Sbjct: 279 RYPVAVLNIKTDPILVDVNVHPTKQEVRISEEQTLLDLISKAVFNELADKNLIPDAVD-- 336
Query: 71 NMNQSMEQDPSSD-VDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDT 129
N+ +S + SS+ +D+ ++ S S +E + + +P DN E N+ S VEP+
Sbjct: 337 NLKKSRVKVSSSEQLDLARMAISGSFGMEQDHVTIPDTDNDEVEKEVNI--SDRYVEPE- 393
Query: 130 PDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANID 189
P + S RQ L D I + K +YA D V N
Sbjct: 394 -----------PIVINS-RQD----LKSDTIA-EFKTKYA------NDAVVNNAVEDGDQ 430
Query: 190 PSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQ 249
P EL F + +GQ + ++ + + L+IIDQHA E+ N+E +
Sbjct: 431 P--------ELKEKDAVQRFPTLTYIGQMHGTYLFAEAEDGLYIIDQHAAQERINYEYYR 482
Query: 250 KTTLIKS---QKLVVPQNLHLTKINQCILKDNLPVFYKNGF 287
S Q L+VP L + + +K+ V G
Sbjct: 483 VQIGEVSDDQQDLLVPIYLDYSTTDAIRIKEKQTVLESCGL 523
>gi|342162981|ref|YP_004767620.1| DNA mismatch repair protein [Streptococcus pseudopneumoniae IS7493]
gi|383938860|ref|ZP_09992057.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus pseudopneumoniae SK674]
gi|418969224|ref|ZP_13520362.1| DNA mismatch repair protein [Streptococcus pseudopneumoniae ATCC
BAA-960]
gi|341932863|gb|AEL09760.1| DNA mismatch repair protein [Streptococcus pseudopneumoniae IS7493]
gi|383352308|gb|EID30024.1| DNA mismatch repair protein [Streptococcus pseudopneumoniae ATCC
BAA-960]
gi|383714201|gb|EID70210.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus pseudopneumoniae SK674]
Length = 649
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 155/368 (42%), Gaps = 41/368 (11%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMNQ 74
++P +++I + DVNV P K+++ + EK L+ V IT+S Q
Sbjct: 280 RFPLAVVHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAITNSLK----------EQ 329
Query: 75 SMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPDETI 134
++ P + ++ K N E+VE +P+ ++N+ + E EP P +T
Sbjct: 330 TL--IPDALENLAKSTVRNREKVEQTILPL--KENTLYY---------EKTEPSRPSQT- 375
Query: 135 EVIDDMPRLQGSYRQSTPVTL-SLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKN 193
EV D L + T +LD + K +A R D+ H +D +
Sbjct: 376 EVADYQVELTDEGQDLTLFAKETLDRLTKPAKLHFAERKPANYDQLD----HPELDLASI 431
Query: 194 KEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL 253
+A +L R + S F +++ GQ + ++ + L+IIDQHA E+ +E +++
Sbjct: 432 DKAYDKLERE-EASSFPELEFFGQMHGTYLFAQGRDGLYIIDQHAAQERVKYEEYRESIG 490
Query: 254 ---IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNT 310
Q+L+VP + LK+ +P+ + G + + +L P+
Sbjct: 491 NVDQSQQQLLVPYIFEFPADDALRLKERMPLLEEVGVFLA--EYGENQFILREHPI---- 544
Query: 311 TLGREDIEELLF-MLQHTNSTEHCRPSRIRAMFA-SRACRKSVMIGRALSVGEMTGLVRN 368
+ E+IE ++ M T+ + RA A +C++S+ + L+
Sbjct: 545 WMAEEEIESGIYEMCDMLLLTKEVSIKKYRAELAIMMSCKRSIKANHRIDDHSARQLLYQ 604
Query: 369 MGRIDQPW 376
+ + D P+
Sbjct: 605 LSQCDNPY 612
>gi|449129147|ref|ZP_21765378.1| DNA mismatch repair protein MutL [Treponema denticola SP37]
gi|448945989|gb|EMB26854.1| DNA mismatch repair protein MutL [Treponema denticola SP37]
Length = 606
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 144/337 (42%), Gaps = 64/337 (18%)
Query: 11 FNNHQYP--FIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVD 68
F N +P F+ LNI+ R VD N+ P KR+ + K + ++ I+ Y D
Sbjct: 274 FPNGGFPSAFVFLNIDPER--VDFNIHPAKREAKFEDYKEIHHSLSSTISSFYKQKTVSD 331
Query: 69 GNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPD 128
+ +S + + + D EK E+E ++ + N + + ++ +
Sbjct: 332 --LLKESYQPEYTRGFDFEK--------TEYEA--------ADLNQSYNPAGTKKYLQSN 373
Query: 129 TPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANI 188
T D YRQ++ T QL+A A + V A + H
Sbjct: 374 TFD---------------YRQNSTKTYWPSSPIRQLEASAAFQEVSAAQHRLSAVAHET- 417
Query: 189 DPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETL 248
S L + + KS F K +GQF FI V+ ++ L+IIDQHA E+ FE L
Sbjct: 418 ---------SALPQDLPKSDF---KFLGQFCGTFIAVEKNNALYIIDQHAAHERILFEGL 465
Query: 249 QKTTLIKSQKLVVPQNLHL-TKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMS 307
+K +L SQ+L++P + ++ + I++ NL K GF S D G ++ ++P+
Sbjct: 466 KK-SLGPSQELLIPYRIETESEKDDEIIRLNLHELQKAGFNISEDKK--GLWIIKAVPIR 522
Query: 308 KNTTLGREDIEELLF--------MLQHTNSTEHCRPS 336
T +D++E L ++ H + CR +
Sbjct: 523 WQGT--EKDLKEDLAGAGKDPSGLMHHILARSACRAA 557
>gi|184158632|ref|YP_001846971.1| DNA mismatch repair ATPase [Acinetobacter baumannii ACICU]
gi|332874328|ref|ZP_08442240.1| DNA mismatch repair protein [Acinetobacter baumannii 6014059]
gi|384131384|ref|YP_005513996.1| mutL [Acinetobacter baumannii 1656-2]
gi|384143713|ref|YP_005526423.1| DNA mismatch repair ATPase [Acinetobacter baumannii MDR-ZJ06]
gi|385238050|ref|YP_005799389.1| DNA mismatch repair ATPase [Acinetobacter baumannii TCDC-AB0715]
gi|387123452|ref|YP_006289334.1| DNA mismatch repair protein MutL [Acinetobacter baumannii MDR-TJ]
gi|407933240|ref|YP_006848883.1| DNA mismatch repair ATPase [Acinetobacter baumannii TYTH-1]
gi|416147726|ref|ZP_11601963.1| DNA mismatch repair ATPase [Acinetobacter baumannii AB210]
gi|417569441|ref|ZP_12220299.1| DNA mismatch repair protein, C-terminal domain protein
[Acinetobacter baumannii OIFC189]
gi|417577957|ref|ZP_12228794.1| DNA mismatch repair protein [Acinetobacter baumannii Naval-17]
gi|417868950|ref|ZP_12513945.1| DNA mismatch repair ATPase [Acinetobacter baumannii ABNIH1]
gi|417873909|ref|ZP_12518771.1| DNA mismatch repair ATPase [Acinetobacter baumannii ABNIH2]
gi|417879215|ref|ZP_12523790.1| DNA mismatch repair ATPase [Acinetobacter baumannii ABNIH3]
gi|417882788|ref|ZP_12527066.1| DNA mismatch repair ATPase [Acinetobacter baumannii ABNIH4]
gi|421202718|ref|ZP_15659865.1| DNA mismatch repair ATPase [Acinetobacter baumannii AC12]
gi|421536161|ref|ZP_15982412.1| DNA mismatch repair ATPase [Acinetobacter baumannii AC30]
gi|421630035|ref|ZP_16070750.1| DNA mismatch repair protein MutL [Acinetobacter baumannii OIFC180]
gi|421651842|ref|ZP_16092209.1| DNA mismatch repair protein [Acinetobacter baumannii OIFC0162]
gi|421686226|ref|ZP_16125981.1| DNA mismatch repair protein [Acinetobacter baumannii IS-143]
gi|421704140|ref|ZP_16143587.1| mutL [Acinetobacter baumannii ZWS1122]
gi|421707789|ref|ZP_16147173.1| mutL [Acinetobacter baumannii ZWS1219]
gi|421792817|ref|ZP_16228962.1| DNA mismatch repair protein, C-terminal domain protein
[Acinetobacter baumannii Naval-2]
gi|424051862|ref|ZP_17789394.1| DNA mismatch repair protein MutL [Acinetobacter baumannii Ab11111]
gi|424063410|ref|ZP_17800895.1| DNA mismatch repair protein MutL [Acinetobacter baumannii Ab44444]
gi|425749940|ref|ZP_18867907.1| DNA mismatch repair protein MutL [Acinetobacter baumannii WC-348]
gi|425751214|ref|ZP_18869162.1| DNA mismatch repair protein MutL [Acinetobacter baumannii
Naval-113]
gi|445459939|ref|ZP_21447848.1| DNA mismatch repair protein, C-terminal domain protein
[Acinetobacter baumannii OIFC047]
gi|445471227|ref|ZP_21451980.1| DNA mismatch repair protein, C-terminal domain protein
[Acinetobacter baumannii OIFC338]
gi|445483703|ref|ZP_21456473.1| GHKL domain / DNA mismatch repair protein, C-terminal domain / MutL
C-terminal dimerization domain multi-domain protein
[Acinetobacter baumannii Naval-78]
gi|183210226|gb|ACC57624.1| DNA mismatch repair enzyme (predicted ATPase) [Acinetobacter
baumannii ACICU]
gi|322507604|gb|ADX03058.1| mutL [Acinetobacter baumannii 1656-2]
gi|323518550|gb|ADX92931.1| DNA mismatch repair ATPase [Acinetobacter baumannii TCDC-AB0715]
gi|332737456|gb|EGJ68371.1| DNA mismatch repair protein [Acinetobacter baumannii 6014059]
gi|333365321|gb|EGK47335.1| DNA mismatch repair ATPase [Acinetobacter baumannii AB210]
gi|342229352|gb|EGT94220.1| DNA mismatch repair ATPase [Acinetobacter baumannii ABNIH3]
gi|342230231|gb|EGT95072.1| DNA mismatch repair ATPase [Acinetobacter baumannii ABNIH2]
gi|342231357|gb|EGT96166.1| DNA mismatch repair ATPase [Acinetobacter baumannii ABNIH1]
gi|342237065|gb|EGU01557.1| DNA mismatch repair ATPase [Acinetobacter baumannii ABNIH4]
gi|347594206|gb|AEP06927.1| DNA mismatch repair ATPase [Acinetobacter baumannii MDR-ZJ06]
gi|385877944|gb|AFI95039.1| DNA mismatch repair protein MutL [Acinetobacter baumannii MDR-TJ]
gi|395553664|gb|EJG19670.1| DNA mismatch repair protein, C-terminal domain protein
[Acinetobacter baumannii OIFC189]
gi|395568654|gb|EJG29324.1| DNA mismatch repair protein [Acinetobacter baumannii Naval-17]
gi|398327846|gb|EJN43977.1| DNA mismatch repair ATPase [Acinetobacter baumannii AC12]
gi|404568828|gb|EKA73923.1| DNA mismatch repair protein [Acinetobacter baumannii IS-143]
gi|404665418|gb|EKB33381.1| DNA mismatch repair protein MutL [Acinetobacter baumannii Ab11111]
gi|404674587|gb|EKB42331.1| DNA mismatch repair protein MutL [Acinetobacter baumannii Ab44444]
gi|407190534|gb|EKE61750.1| mutL [Acinetobacter baumannii ZWS1122]
gi|407191289|gb|EKE62491.1| mutL [Acinetobacter baumannii ZWS1219]
gi|407901821|gb|AFU38652.1| DNA mismatch repair ATPase [Acinetobacter baumannii TYTH-1]
gi|408507775|gb|EKK09469.1| DNA mismatch repair protein [Acinetobacter baumannii OIFC0162]
gi|408699384|gb|EKL44864.1| DNA mismatch repair protein MutL [Acinetobacter baumannii OIFC180]
gi|409985971|gb|EKO42173.1| DNA mismatch repair ATPase [Acinetobacter baumannii AC30]
gi|410398908|gb|EKP51111.1| DNA mismatch repair protein, C-terminal domain protein
[Acinetobacter baumannii Naval-2]
gi|425487342|gb|EKU53700.1| DNA mismatch repair protein MutL [Acinetobacter baumannii WC-348]
gi|425500157|gb|EKU66182.1| DNA mismatch repair protein MutL [Acinetobacter baumannii
Naval-113]
gi|444768271|gb|ELW92488.1| GHKL domain / DNA mismatch repair protein, C-terminal domain / MutL
C-terminal dimerization domain multi-domain protein
[Acinetobacter baumannii Naval-78]
gi|444771967|gb|ELW96091.1| DNA mismatch repair protein, C-terminal domain protein
[Acinetobacter baumannii OIFC338]
gi|444773174|gb|ELW97270.1| DNA mismatch repair protein, C-terminal domain protein
[Acinetobacter baumannii OIFC047]
Length = 650
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 80/372 (21%), Positives = 149/372 (40%), Gaps = 54/372 (14%)
Query: 11 FNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGN 70
+ HQ+ +L +E+ +++DVNV P K +I +++ + V+ + ++ A F
Sbjct: 288 LHGHQHSSYLLFLEVDPENIDVNVHPTKHEIRFLNQREVHEFVRHYAKETLA-QFQTASA 346
Query: 71 NMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTP 130
++ Q+M+ D D N S +Q P+ E T
Sbjct: 347 DLAQAMKVD----------------------------DTQNLS----VQPQPKYQEQFTL 374
Query: 131 DETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRC-VENRFHANID 189
T + D Y+ ST + + + Q YA +T + + N +
Sbjct: 375 HRTAQAADTAVDKPNGYQPSTELLTDFNNSRPQ-SVHYAEQTPKYNGSAQLNNALKTYLA 433
Query: 190 PSKNKEA----ESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNF 245
P +++ A + + V K F + Q + +I+ + L I+D HA E+
Sbjct: 434 PLRDQPANFSVDESIEPVAKVDEFPLGIAIAQLHGIYILAQNTEGLIIVDMHAAHERILL 493
Query: 246 ETLQ----KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLL 301
+ ++ K SQ+L++P+ + ++++ ++D P + G E D D V++
Sbjct: 494 QQMKNAWDKPEFWTSQQLLIPKVISISRMQAVRVEDLKPQLERLGLE--IDLYGDEQVIV 551
Query: 302 TSLPMSKNTTLGREDIE----ELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRAL 357
+P L + D E ELL L + + R + A AC +V R L
Sbjct: 552 RGVP----AILQKADFENLIPELLNDLDPNDEAQGLLQKR-DELLAGMACHGAVRAHRQL 606
Query: 358 SVGEMTGLVRNM 369
S+ EM L+R M
Sbjct: 607 SLSEMNALLRQM 618
>gi|296314214|ref|ZP_06864155.1| DNA mismatch repair protein MutL [Neisseria polysaccharea ATCC
43768]
gi|296839113|gb|EFH23051.1| DNA mismatch repair protein MutL [Neisseria polysaccharea ATCC
43768]
Length = 658
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 94/401 (23%), Positives = 168/401 (41%), Gaps = 70/401 (17%)
Query: 1 MKLVNEVYHQ-FNNHQYPFIILNIEMSRDSVDVNVTPDKRQI-FMDHEK---LLLATVKV 55
+ V + Y +N P +L +++ ++VDVNV P K +I F D ++ L+ T+
Sbjct: 264 LHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSQQVHQLVFHTLNK 323
Query: 56 HITDSYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETI-----PVPSEDNS 110
+ D+ A ++ +S+ SN+ EV H+ P+PSE++S
Sbjct: 324 ALADTRA--------DLTESV---------------SNAGEVLHDITGVTPAPMPSENDS 360
Query: 111 N--FSHEANLQQSPETVEPDTPDETIEVIDDMPR-LQGSYRQSTPVTLSLDIIQDQLKAR 167
F+ +N P +PDT + P Q +Y P SL + + +
Sbjct: 361 ENLFNRASNY---PTGNKPDTRNAFGSSGKTAPMPYQSAY---APQQRSLPLRESRAAMN 414
Query: 168 -YARRTVQAQD------RCVENRFHANIDPSKNKEAESEL---NRVIKKSMFEKMKIVGQ 217
YA + D R + RF N+ PS+ +++ + + +S +
Sbjct: 415 TYAELYKKTDDIDLELSRFEQARF-GNM-PSETPAPKTDTPLSDGIPSQSELPPLGFAIA 472
Query: 218 FNLG-FIIVKYDSDLFIIDQHATDEKYNFETL----QKTTLIKSQKLVVPQNLHLTKINQ 272
LG +I+ + + L +ID HA E+ N+E + Q+ ++SQ+L++P +
Sbjct: 473 QLLGIYILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGRLQSQRLLIPVTFAASHEEC 532
Query: 273 CILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDI----EELLFMLQHTN 328
L D G E S GN L + LG+ D+ +++L
Sbjct: 533 AALADYAETLAGFGLEL---SDMGGNTLAVR---AAPAMLGKADVVSLAKDVLNEFAQVG 586
Query: 329 STEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
S++ R + A+ +C SV GR L++ EM L+R+M
Sbjct: 587 SSQTIEEHENR-ILATMSCHGSVRAGRRLTLPEMNALLRDM 626
>gi|313125312|ref|YP_004035576.1| DNA mismatch repair protein mutl [Halogeometricum borinquense DSM
11551]
gi|448287092|ref|ZP_21478308.1| DNA mismatch repair protein mutl [Halogeometricum borinquense DSM
11551]
gi|312291677|gb|ADQ66137.1| DNA mismatch repair protein MutL [Halogeometricum borinquense DSM
11551]
gi|445572838|gb|ELY27368.1| DNA mismatch repair protein mutl [Halogeometricum borinquense DSM
11551]
Length = 586
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 76/179 (42%), Gaps = 12/179 (6%)
Query: 205 KKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTT------LIKSQK 258
++S F+ ++++GQF +++ + D DL +ID HA E+ N+E L+ ++S
Sbjct: 386 EESRFDGVRVIGQFRDLYLLCEADDDLLVIDHHAAHERVNYERLRAAVGAGEVNAVESIP 445
Query: 259 LVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIE 318
+ + L+ + G+E DS V + +P E +
Sbjct: 446 IDPAATVSLSPAQAAATAEWRDELAHLGYE--LDSFGGDTVRVRGVPAPMGRAAAPESVR 503
Query: 319 ELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPWV 377
+ L L+ + ++ + AC S+ G AL+ E T LV +G +QP+
Sbjct: 504 DALDALRGGETPGDATDRLLKDL----ACHPSLKAGDALNTEEATRLVERLGSCEQPYA 558
>gi|421563641|ref|ZP_16009457.1| DNA mismatch repair protein mutL [Neisseria meningitidis NM2795]
gi|402340126|gb|EJU75329.1| DNA mismatch repair protein mutL [Neisseria meningitidis NM2795]
Length = 658
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 94/396 (23%), Positives = 168/396 (42%), Gaps = 60/396 (15%)
Query: 1 MKLVNEVYHQ-FNNHQYPFIILNIEMSRDSVDVNVTPDKRQI-FMDHEKLLLATVKVHIT 58
+ V + Y +N P +L +++ ++VDVNV P K +I F D ++ VH
Sbjct: 264 LHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSQQ-------VHQL 316
Query: 59 DSYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETI-----PVPSEDNSN-- 111
+A +N+++ D +D+ E + SN+ EV H+ P+PSE+NS
Sbjct: 317 VFHA---------LNKAL-ADTRADL-TESV--SNAGEVLHDITGVTPAPMPSENNSENL 363
Query: 112 FSHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARR 171
F +N P +PD + + P + R +LSL + + YA
Sbjct: 364 FDRASNY---PTGNKPDIRNAFVSSGKTAPMPYQAARAPQQHSLSLRESRAAMNT-YAEL 419
Query: 172 TVQAQDRCVE------NRFHANIDPSKNKEAESEL---NRVIKKSMFEKMKIVGQFNLG- 221
+ D +E RF N+ PS+ ++++ + + S + LG
Sbjct: 420 YKKTDDIDLELSQFEQARF-GNM-PSETPAQKTDMPLSDGIPSPSELPPLGFAIAQLLGI 477
Query: 222 FIIVKYDSDLFIIDQHATDEKYNFETL----QKTTLIKSQKLVVPQNLHLTKINQCILKD 277
+I+ + + L +ID HA E+ N+E + Q+ ++SQ+L++P + L D
Sbjct: 478 YILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGKLQSQRLLIPITFAASHEECAALAD 537
Query: 278 NLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDI----EELLFMLQHTNSTEHC 333
G E S GN L + LG+ D+ +++L S++
Sbjct: 538 YAETLAGFGLEL---SDMGGNTLAAC---AAPAMLGKSDVVSLAKDVLNEFAQVGSSQTI 591
Query: 334 RPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
R + A+ +C S+ GR L++ EM L+R+M
Sbjct: 592 EEHENR-ILATMSCHGSIRAGRRLTLPEMNALLRDM 626
>gi|373469165|ref|ZP_09560374.1| DNA mismatch repair protein [Lachnospiraceae bacterium oral taxon
082 str. F0431]
gi|371765047|gb|EHO53411.1| DNA mismatch repair protein [Lachnospiraceae bacterium oral taxon
082 str. F0431]
Length = 645
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 157/385 (40%), Gaps = 63/385 (16%)
Query: 14 HQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMN 73
HQYPF LN ++ + VDVNV P K ++ + K + + +
Sbjct: 277 HQYPFCALNFDL--NGVDVNVHPRKMEVRFSDRNFVYDNTKEAVEEIFTT---------- 324
Query: 74 QSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSED---NSNFSHEANLQQSPETVEPDT- 129
S V + ++++E+ P P E+ + + + E LQ E V DT
Sbjct: 325 -------QSAVREVPVGKTSNEKKVFVNTPEPFENKRRDMSETPEKVLQNKYEDVTKDTL 377
Query: 130 ----PDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFH 185
PD+ I+ +P+ + Y ++ I+D+ R ++ ++
Sbjct: 378 HSTGPDDEIKW--RVPK-ENMYNPKDDMSF----IKDENTKRVYSDINDLSNKSIKEVNI 430
Query: 186 ANID--------PSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQH 237
NID PS+ ESE + MK++GQ + IV+ +++++IIDQH
Sbjct: 431 GNIDDVNPNGIKPSQLSFFESESKKY--------MKVIGQVFDTYWIVQLENEMYIIDQH 482
Query: 238 ATDEKYNFETL---QKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEF-SFDS 293
A EK +E L K + SQ + P + LT + Q +L +++ F GF+ F
Sbjct: 483 AAHEKVMYERLLKESKANKLSSQMINPPIIVTLTDLEQNVLNEHMEEFISIGFDIEEFGG 542
Query: 294 SDDG-NVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSR-IRAMFASRACRKSV 351
+ N + P L E ML + + + PS I A AS +C+ ++
Sbjct: 543 KEYKINAIPNIFPSIPKAELFNE-------MLSDSTNYDVISPSELILAKVASMSCKAAI 595
Query: 352 MIGRALSVGEMTGLVRNMGRIDQPW 376
+S+ E L + +D P+
Sbjct: 596 KGNMRISLLEANELFDELLSLDNPY 620
>gi|225075177|ref|ZP_03718376.1| hypothetical protein NEIFLAOT_00177 [Neisseria flavescens
NRL30031/H210]
gi|224953352|gb|EEG34561.1| hypothetical protein NEIFLAOT_00177 [Neisseria flavescens
NRL30031/H210]
Length = 658
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 93/398 (23%), Positives = 166/398 (41%), Gaps = 64/398 (16%)
Query: 1 MKLVNEVYHQ-FNNHQYPFIILNIEMSRDSVDVNVTPDKRQI-FMDHEK---LLLATVKV 55
+ V + Y +N P +L +++ ++VDVNV P K +I F D + L+ T+
Sbjct: 264 LHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSRQVHQLVFHTLNK 323
Query: 56 HITDSYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPV-----PSEDNS 110
+ D+ A ++ +S+ SN+ EV H+ V PSE++S
Sbjct: 324 ALADTRA--------DLTESV---------------SNAGEVLHDITGVVSTQMPSENDS 360
Query: 111 N--FSHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARY 168
F +N P +PDT + P + R +LSL + + Y
Sbjct: 361 ENLFDSASNY---PTGNKPDTRNAFGASGKTAPMPYQAARAPQQRSLSLRESRAAMNT-Y 416
Query: 169 ARRTVQAQD------RCVENRFHANIDPSKNKEAESELNRVI-KKSMFEKMKIVGQFNLG 221
A + D R + RF + + ++ L+ I +S + LG
Sbjct: 417 AELYKKTDDIDLELNRLEQARFGNMPSETPTPKTDAPLSDGIPSQSELPPLGFAIAQLLG 476
Query: 222 -FIIVKYDSDLFIIDQHATDEKYNFETL----QKTTLIKSQKLVVPQNLHLTKINQCILK 276
+I+ + + L +ID HA E+ N+E + Q+ ++SQ+L++P + L
Sbjct: 477 IYILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGNLQSQRLLIPVTFAASHEECAALA 536
Query: 277 DNLPVFYKNGFEFSFDSSDDGNVL-LTSLPMSKNTTLGREDI----EELLFMLQHTNSTE 331
D+ G E S GN L + ++P LG+ D+ +++L L S++
Sbjct: 537 DHAETLAGFGLEL---SDMGGNTLAVRAVP----AMLGKSDVVSLAKDVLNELAQVGSSQ 589
Query: 332 HCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
R + A+ +C S+ GR L++ EM L+R+M
Sbjct: 590 TIEEHENR-ILATMSCHGSIRAGRRLTLPEMNALLRDM 626
>gi|416203322|ref|ZP_11620050.1| DNA mismatch repair protein MutL [Neisseria meningitidis 961-5945]
gi|325142632|gb|EGC65023.1| DNA mismatch repair protein MutL [Neisseria meningitidis 961-5945]
Length = 658
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 89/397 (22%), Positives = 164/397 (41%), Gaps = 62/397 (15%)
Query: 1 MKLVNEVYHQ-FNNHQYPFIILNIEMSRDSVDVNVTPDKRQI-FMDHEK---LLLATVKV 55
+ V + Y +N P +L +++ ++VDVNV P K +I F D ++ L+ T+
Sbjct: 264 LHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSQQVHQLVFHTLNK 323
Query: 56 HITDSYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETI-----PVPSEDNS 110
+ D+ A ++ +S+ N+ EV H+ P+PSE+NS
Sbjct: 324 ALADTRA--------DLTESV---------------GNAGEVLHDITGVTPAPMPSENNS 360
Query: 111 N--FSHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARY 168
F +N P +PDT + P + R +LSL + + Y
Sbjct: 361 ENLFDRASNY---PTGNKPDTRNAFGASGKTAPMPYQAARAPQQRSLSLRESRAAMNT-Y 416
Query: 169 ARRTVQAQD------RCVENRFHANIDPSKNKEAESELNRVI-KKSMFEKMKIVGQFNLG 221
A + D R + RF + + ++ L+ I +S + LG
Sbjct: 417 AELYKKTDDIDLELNRLEQARFGNMPSETPTPKTDAPLSDGIPSQSELPPLGFAIAQLLG 476
Query: 222 -FIIVKYDSDLFIIDQHATDEKYNFETL----QKTTLIKSQKLVVPQNLHLTKINQCILK 276
+I+ + + L +ID HA E+ N+E + Q+ ++SQ+L++P + +C
Sbjct: 477 IYILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGRLQSQRLLIPVTFAASH-EECAAL 535
Query: 277 DNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDI----EELLFMLQHTNSTEH 332
+ GF + + ++P LG+ D+ +++L L S++
Sbjct: 536 ADH-ADALAGFGLELSDMGGNTLAVRTVP----AMLGKADVVSLAKDVLGELAQVGSSQT 590
Query: 333 CRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
R + A+ +C SV GR L++ EM L+R+M
Sbjct: 591 IEEHENR-ILATMSCHGSVRAGRRLTLPEMNALLRDM 626
>gi|241758859|ref|ZP_04756972.1| DNA mismatch repair protein MutL [Neisseria flavescens SK114]
gi|241321067|gb|EER57280.1| DNA mismatch repair protein MutL [Neisseria flavescens SK114]
Length = 658
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 96/401 (23%), Positives = 167/401 (41%), Gaps = 70/401 (17%)
Query: 1 MKLVNEVYHQ-FNNHQYPFIILNIEMSRDSVDVNVTPDKRQI-FMDHEK---LLLATVKV 55
+ V + Y +N P +L +++ ++VDVNV P K +I F D ++ L+ T+
Sbjct: 264 LHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSQQVHQLVFHTLNK 323
Query: 56 HITDSYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHE-----TIPVPSE-DN 109
+ D+ A ++ +S+ SN+ EV H+ T P+PSE D
Sbjct: 324 ALADTRA--------DLTESV---------------SNAGEVLHDITGVTTTPMPSENDG 360
Query: 110 SNFSHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYA 169
N A+ P +PDT + P + R +LSL + + YA
Sbjct: 361 ENLFDSAS--NYPTGNKPDTRNAFGSSGKTAPMPYQAARAPQQRSLSLRESRAAMNT-YA 417
Query: 170 RRTVQAQDRCVE------NRFHANI-----DPSKNKEAESELNRVIKKSMFEKMKIVGQF 218
+ D +E RF N+ P +K+ L +S +
Sbjct: 418 ELYKKTDDIDLELSQFEQARF-GNMPSETPTPKTDKQCSDGLP---SQSELPPLGFAIAQ 473
Query: 219 NLG-FIIVKYDSDLFIIDQHATDEKYNFETL----QKTTLIKSQKLVVPQNLHLTKINQC 273
LG +I+ + + L +ID HA E+ N+E + Q+ ++SQ+L++P +
Sbjct: 474 LLGIYILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGNLQSQRLLIPVTFAASHEECA 533
Query: 274 ILKDNLPVFYKNGFEFSFDSSDDGNVL-LTSLPMSKNTTLGREDI----EELLFMLQHTN 328
L D+ + G E S GN L + ++P LG+ D+ +++L L
Sbjct: 534 ALADHAEMLTGFGLEL---SDMGGNTLAVRAVP----AMLGKADVVSLAKDVLGELAQVG 586
Query: 329 STEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
S++ + A+ +C SV GR L++ EM L+R+M
Sbjct: 587 SSQTIEEHE-NHILATMSCHGSVRAGRQLTLPEMNALLRDM 626
>gi|448633065|ref|ZP_21674063.1| DNA mismatch repair protein MutL [Haloarcula vallismortis ATCC
29715]
gi|445752422|gb|EMA03846.1| DNA mismatch repair protein MutL [Haloarcula vallismortis ATCC
29715]
Length = 717
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 115/297 (38%), Gaps = 48/297 (16%)
Query: 10 QFNNHQYPFIILNIEMSRDSVDVNVTPDKRQI-FMD----HEKLLLATVKVHITDSYAIG 64
Q +YPF +L +++ VDVNV P K ++ F D E++ A + +
Sbjct: 291 QIAPDRYPFAVLFLDVPAGDVDVNVHPRKLEVRFADDEGVREQVRTAVEDALLREGLLRS 350
Query: 65 FTVDGNNMNQSMEQDPSSDVDMEKIQ---RSNSEEVEHETIPVPSEDNSNFSH--EANLQ 119
G + + E P SD E+ + RS+ + ET D++ H E +Q
Sbjct: 351 TAPRGRSAPEQTEITPESDGASERERQPSRSDDRDTADETATTARTDSTTAEHSVETTIQ 410
Query: 120 QSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRC 179
+S + + P D P+ + + QS+ T+S D D +A A A
Sbjct: 411 ES-DAAPTERP--------DGPQAETAGHQSSDTTVS-DQSVDPNRASAAEANDDASGNS 460
Query: 180 VENRFHANIDPSKNKEAESELNRVIKK--------------------------SMFEKMK 213
E + ++ + + SE + + M+
Sbjct: 461 GERQAGGSVLGGDSDDGGSEASGTARTESTREDWKFTGGQEQVRLGDRPEATHESLPSMR 520
Query: 214 IVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKT--TLIKSQKLVVPQNLHLT 268
I+GQ +++ + D L ++DQHA DE+ N+E L+ +Q L P L LT
Sbjct: 521 ILGQLADTYVVAETDDGLVLVDQHAADERVNYERLKAKFEGETTTQALADPVELELT 577
>gi|430762041|ref|YP_007217898.1| DNA mismatch repair protein MutL [Thioalkalivibrio nitratireducens
DSM 14787]
gi|430011665|gb|AGA34417.1| DNA mismatch repair protein MutL [Thioalkalivibrio nitratireducens
DSM 14787]
Length = 598
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 77/161 (47%), Gaps = 12/161 (7%)
Query: 215 VGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQK---TTLIKSQKLVVPQNLHLTKIN 271
+GQ F++ + L ++D HA E+ +E L+K + Q L+VP+ L +T+
Sbjct: 412 IGQIADAFVLAENARGLVLVDMHAAHERITYERLKKDWRAARMIRQPLLVPETLQVTRAE 471
Query: 272 QCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIE---ELLFMLQHTN 328
+ + + + GFE D S +V L + P GR+ ++ ++L LQH
Sbjct: 472 ADLAEASADLLRGLGFE--VDRSGPESVTLRAGPALLQ---GRDLVQLLRDVLADLQHLG 526
Query: 329 STEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
+ + + + + AC ++ GR L++ EM L+R+M
Sbjct: 527 HADRAEAA-LDGVLGTIACHGAIRAGRRLTLPEMNRLLRDM 566
>gi|326387365|ref|ZP_08208974.1| DNA mismatch repair protein MutL [Novosphingobium nitrogenifigens
DSM 19370]
gi|326208021|gb|EGD58829.1| DNA mismatch repair protein MutL [Novosphingobium nitrogenifigens
DSM 19370]
Length = 618
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 91/230 (39%), Gaps = 18/230 (7%)
Query: 152 PVTLSLDIIQDQLKARYARRTVQAQDRCVE-----NRFHANIDPSKNKEAESELNRVIKK 206
PV + +Q L AR A R R E + A + AE V +
Sbjct: 364 PVFSPVPPVQSNLFARPASRPAYVPQRLGEAGVAWRGYEAEVMALPEARAEPATAPVPEG 423
Query: 207 SMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL----IKSQKLVVP 262
GQ +I+ + L I+DQHA E+ E L+ +Q L++P
Sbjct: 424 EAHPLGVARGQIGKTYIVAEAADGLVIVDQHAAHERLVLERLRAAGAGEGDAPAQALLLP 483
Query: 263 QNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLF 322
+ + L +++ L++ + F + G VL+ S+P LG+ D + L+
Sbjct: 484 EVVELDEVDCDRLEEAAHELAR--FGLILERFGPGAVLIRSVP----AMLGKGDPQALVR 537
Query: 323 MLQ---HTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
+ N R+ + A+ AC SV GR LSV EM L+R M
Sbjct: 538 DVADDLARNGATLLVGERLDLVLATMACHGSVRAGRVLSVPEMNALLREM 587
>gi|418635632|ref|ZP_13198003.1| DNA mismatch repair protein [Staphylococcus lugdunensis VCU139]
gi|374841661|gb|EHS05121.1| DNA mismatch repair protein [Staphylococcus lugdunensis VCU139]
Length = 566
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 84/385 (21%), Positives = 153/385 (39%), Gaps = 74/385 (19%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNM-- 72
+YP +NI+M VDVNV P K ++ + E+ L + I +++ + N
Sbjct: 208 RYPICYINIKMDPILVDVNVHPTKLEVRLSKEEQLYQLIVEKIREAFHDRILIPQNKWDE 267
Query: 73 ----NQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPD 128
N+ + +D EK QR N+ S D S+ L+Q+ T D
Sbjct: 268 KPKKNKVLHTFEQQQMDFEK-QRQNTN----------SNDTSSERASNELEQT--TTSDD 314
Query: 129 TPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANI 188
+ET++ +D + Y +R + F + +
Sbjct: 315 FNEETVQPVD---------------------------STYNKRNSNDDYFERQKEFLSEL 347
Query: 189 DPSKNKEAESELNRVIKKSMFEK-------MKIVGQFNLGFIIVKYDSDLFIIDQHATDE 241
D S + + IK ++ + M+IVGQ + +II + ++ +F+IDQHA E
Sbjct: 348 DNSTSSNSSLLEQEDIKGTVSKTPSRRVPYMEIVGQVHGTYIIAQNENGMFMIDQHAAQE 407
Query: 242 KYNFETLQKT---TLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFS-FDSSDDG 297
+ +E + + Q L++P H +K Q I+ K G F SD
Sbjct: 408 RIKYEYFRDKIGEVTNEVQDLLIPMTFHFSKDEQIIINQYQSELDKVGVHLEHFGGSD-- 465
Query: 298 NVLLTSLPMSKNTTLGREDIEELL-----FMLQHTN-STEHCRPSRIRAMFASRACRKSV 351
++ S P+ L + D+E+++ +L+H + R M +C+KS+
Sbjct: 466 -YIVNSYPV----WLPKADVEDIIKDMIELVLEHKKIDIKKLREDAAIMM----SCKKSI 516
Query: 352 MIGRALSVGEMTGLVRNMGRIDQPW 376
L + EM L+ + + + P+
Sbjct: 517 KANHYLKINEMADLIDQLRKAEDPF 541
>gi|240014088|ref|ZP_04721001.1| DNA mismatch repair protein [Neisseria gonorrhoeae DGI18]
gi|240016522|ref|ZP_04723062.1| DNA mismatch repair protein [Neisseria gonorrhoeae FA6140]
gi|240121649|ref|ZP_04734611.1| DNA mismatch repair protein [Neisseria gonorrhoeae PID24-1]
gi|268601421|ref|ZP_06135588.1| DNA mismatch repair protein [Neisseria gonorrhoeae PID18]
gi|268585552|gb|EEZ50228.1| DNA mismatch repair protein [Neisseria gonorrhoeae PID18]
Length = 654
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 93/402 (23%), Positives = 160/402 (39%), Gaps = 76/402 (18%)
Query: 1 MKLVNEVYHQ-FNNHQYPFIILNIEMSRDSVDVNVTPDKRQI-FMDH---EKLLLATVKV 55
+ V + Y +N P +L +E+ ++VDVNV P K +I F D +L+ T+
Sbjct: 264 LHAVKQAYRDVLHNALTPAFVLFLELPPEAVDVNVHPTKTEIRFRDSRQVHQLVFHTLNK 323
Query: 56 HITDSYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETI-----PVPSE-DN 109
+ D+ A N+ +S+ SN+ EV H+ P+PSE D
Sbjct: 324 ALADTRA--------NLTESV---------------SNAGEVLHDITGVTPAPMPSENDG 360
Query: 110 SNFSHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDII--QDQLKAR 167
N A+ P +PD + GS ++ P+ Q L R
Sbjct: 361 ENLFDSAS--NHPTGNKPDIRNAF-----------GSSGKTAPMPYQAARAPQQHSLSLR 407
Query: 168 YARRTVQAQDRCVENRFHANIDPSK-------NKEAESELNRVI----KKSMFEKMKIVG 216
+R + + + +++ S+ N +ES N V + S +
Sbjct: 408 ESRAAMDTYAELYKKTDNIDLELSQFEQARFGNMPSESSTNNVSDGIGQASELPPLGFAI 467
Query: 217 QFNLG-FIIVKYDSDLFIIDQHATDEKYNFETL----QKTTLIKSQKLVVPQNLHLTKIN 271
LG +I+ + + L +ID HA E+ N+E + Q+ ++SQ L++P +
Sbjct: 468 AQLLGIYILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGNLQSQHLLIPVTFAASHEE 527
Query: 272 QCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDI----EELLFMLQHT 327
L D+ G E S GN L + LG+ D+ ++L L
Sbjct: 528 CAALADHAETLAGFGLEL---SDMGGNTLAVR---AAPVMLGKSDVVSLARDVLGELAQV 581
Query: 328 NSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
S++ R + A+ +C S+ GR L++ EM L+R+M
Sbjct: 582 GSSQTIASHENR-ILATMSCHGSIRAGRRLTLPEMNALLRDM 622
>gi|386817133|ref|ZP_10104351.1| DNA mismatch repair protein MutL [Thiothrix nivea DSM 5205]
gi|386421709|gb|EIJ35544.1| DNA mismatch repair protein MutL [Thiothrix nivea DSM 5205]
Length = 610
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 78/167 (46%), Gaps = 14/167 (8%)
Query: 215 VGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL---IKSQKLVVPQNLHLTKIN 271
+ Q + +I+ + + L ++D HA E+ +E L+++ I+SQ L+VP +L+++K
Sbjct: 424 IAQLHGIYILAQNQAGLVVVDMHAAHERITYEHLKQSMAEDAIRSQPLLVPTSLNVSKKE 483
Query: 272 QCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTE 331
+ + F+ GFE + L L + +L +E E L +
Sbjct: 484 ADYAEQHADAFHALGFELD-------RLGLEKLTIRAVPSLLKESDTEALVRDVLADLIT 536
Query: 332 HCRPSRIR----AMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQ 374
H RI+ + A+ AC SV R LS EM L+R+M R ++
Sbjct: 537 HGGSQRIQNAMNEILATMACHSSVRANRRLSTPEMNALLRDMERTER 583
>gi|354548299|emb|CCE45035.1| hypothetical protein CPAR2_700390 [Candida parapsilosis]
Length = 626
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 84/191 (43%), Gaps = 25/191 (13%)
Query: 211 KMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQK---TTLIKSQKLVVPQNLHL 267
K +I+ Q + FI++ +S L I+DQHA DE+ E L + + ++ +LV P + +
Sbjct: 417 KYRIIKQIDKKFILLIINSKLVILDQHAADERVKVEQLMREFVYNMPRNLRLVQPLRIKV 476
Query: 268 TKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTS------LPMSKNTTLGREDIEELL 321
+ +L+ L F G + N L+ + +P + + + +
Sbjct: 477 SSSEHLLLQQYLAQFKSLGIIYYLGKEKKDNDLIITNVPELLIPSCNDGPFIKSLLMQHC 536
Query: 322 FMLQH------TNST----------EHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGL 365
F LQ+ N+T H P I M SRACR ++M G L++ EM L
Sbjct: 537 FDLQNNIKNQIVNATIANDGDWLIVMHHTPQFIINMINSRACRSAIMFGDELTMQEMHQL 596
Query: 366 VRNMGRIDQPW 376
+ ++ + P+
Sbjct: 597 IDDLSKCKLPF 607
>gi|193214447|ref|YP_001995646.1| DNA mismatch repair protein MutL [Chloroherpeton thalassium ATCC
35110]
gi|238692707|sp|B3QW86.1|MUTL_CHLT3 RecName: Full=DNA mismatch repair protein MutL
gi|193087924|gb|ACF13199.1| DNA mismatch repair protein MutL [Chloroherpeton thalassium ATCC
35110]
Length = 640
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 83/170 (48%), Gaps = 11/170 (6%)
Query: 213 KIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFE---TLQKTTLIKSQKLVVPQNLHLTK 269
+ V Q + +I+ + S L IIDQH E+ +E + ++ + SQ+L+ P + L+
Sbjct: 454 RFVWQLHNTYILTQIKSGLLIIDQHVAHERILYERAIAVMESNVPNSQQLLFPHSAKLSA 513
Query: 270 INQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGRED--IEELLFMLQHT 327
+LK+ + GF S D VL+ +P + GRE+ + E+L Q+
Sbjct: 514 WEFDVLKEIKTDLVQLGF--SLRILDQRTVLVEGIP--PDVMPGREERILHEML--EQYQ 567
Query: 328 NSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPWV 377
+ ++ + + + S ACR S+M G+ LS EMT L+ + P+V
Sbjct: 568 DYQQNLKLEQRDNVAKSYACRSSIMAGQKLSRNEMTSLIDQLFATSMPYV 617
>gi|421623847|ref|ZP_16064726.1| DNA mismatch repair protein [Acinetobacter baumannii OIFC098]
gi|408703013|gb|EKL48419.1| DNA mismatch repair protein [Acinetobacter baumannii OIFC098]
Length = 650
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 153/372 (41%), Gaps = 54/372 (14%)
Query: 11 FNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGN 70
+ HQ+ +L +E+ +++DVNV P K +I +++ + V+ + ++ A F
Sbjct: 288 LHGHQHSSYLLFLEVDPENIDVNVHPTKHEIRFLNQREVHEFVRHYAKETLA-QFQTAST 346
Query: 71 NMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETV--EPD 128
++ Q+M+ D ++ ++ + + H T Q+ +T +P+
Sbjct: 347 DLAQAMKVDDIQNLSVQPQPKYQEQFTLHRTA-----------------QAADTAVDKPN 389
Query: 129 TPDETIEVIDDM--PRLQG-SYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFH 185
+ E++ D R Q Y + TP + + LK A Q + V+
Sbjct: 390 AYQPSTELLTDFNNSRPQAVHYAEQTPKYNGSAQLNNALKTYLAPLRDQPANFSVDE--- 446
Query: 186 ANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNF 245
NI+P V K F + Q + +I+ + L I+D HA E+
Sbjct: 447 -NIEP------------VAKVDEFPLGIAIAQLHGIYILAQNTEGLIIVDMHAAHERILL 493
Query: 246 ETLQ----KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLL 301
+ ++ K SQ+L++P+ + ++++ ++D P + G E D D V++
Sbjct: 494 QQMKNAWDKPEFWTSQQLLIPKVISISRMQAVRVEDLKPQLERLGLE--IDLYGDEQVIV 551
Query: 302 TSLPMSKNTTLGREDIE----ELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRAL 357
+P L + D E ELL L + + R + A AC +V R L
Sbjct: 552 RGVP----AILQKADFENLIPELLNDLDPNDEAQGLLQKR-DELLAGMACHGAVRAHRQL 606
Query: 358 SVGEMTGLVRNM 369
S+ EM L+R M
Sbjct: 607 SLSEMNALLRQM 618
>gi|269123804|ref|YP_003306381.1| DNA mismatch repair protein MutL [Streptobacillus moniliformis DSM
12112]
gi|268315130|gb|ACZ01504.1| DNA mismatch repair protein MutL [Streptobacillus moniliformis DSM
12112]
Length = 606
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 88/179 (49%), Gaps = 16/179 (8%)
Query: 206 KSMFEK-------MKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKT---TLIK 255
K FEK +++GQ +I+V D++L I DQH E+ +E L + I
Sbjct: 408 KPFFEKKEGEVKYYEVLGQIFDTYILVNRDNNLEIYDQHIIHERLLYEELMSSFEKKNIG 467
Query: 256 SQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGRE 315
SQ L++P+ + ++ +++ I+ +N+ F K GFE D + + L ++P +
Sbjct: 468 SQILLLPELIDVSPVDKDIIFNNMDTFEKLGFE--IDEISNNQIALRAVPNFNFRESIKN 525
Query: 316 DIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQ 374
+E +L L+ N R I +M +CR ++ G+ L++ EM +VR + + +
Sbjct: 526 ILENILVDLKSKNKVGDIREKIIISM----SCRGAIKAGQKLNMQEMQNMVRRLHEVGK 580
>gi|166031821|ref|ZP_02234650.1| hypothetical protein DORFOR_01522 [Dorea formicigenerans ATCC
27755]
gi|166028274|gb|EDR47031.1| DNA mismatch repair domain protein [Dorea formicigenerans ATCC
27755]
Length = 698
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 98/431 (22%), Positives = 186/431 (43%), Gaps = 79/431 (18%)
Query: 2 KLVNEVYHQFN-NHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K + + Y F H+YPF++L +++ + VDVNV P K + ++++ + T+ + D
Sbjct: 266 KAIEDGYKDFTMQHKYPFVVLYLDVDTEHVDVNVHPTKMDVRFNNQQEIYNTLFAAVDDG 325
Query: 61 YAIGFTVDGNNMNQSMEQDPSSDVDMEKIQ------RSN-SEEVEHETIPVPSEDNSNFS 113
E P +D KI +SN EE + + +P + S
Sbjct: 326 L------------HERELIPEVTLDDIKIPEEPKDCKSNFPEEPKESKMDLPKK--SEAE 371
Query: 114 HEANLQQSPETVEPDTPDETIE-VIDDMPRLQGSY--------RQSTPVTLSLDI--IQD 162
H L+ S ++ P DE ++ +++M + SY +++TP + + D +Q
Sbjct: 372 HTEKLRTSLQS--PQNEDEKLQYFMNEMKKRVYSYHEALHENKQETTPASSNTDACDLQK 429
Query: 163 QLKARYA---------------RRTVQAQDRCVENRFHANIDPSKNKEAE---------- 197
+ Y+ +R VQAQ + N+ ++ AE
Sbjct: 430 NVPVPYSYKPQKNIPAPNSYKPQRNVQAQSSY---KSQQNVQTQGSQIAEMPNYTARQVP 486
Query: 198 ----SELN----RVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFE-TL 248
+LN ++++ + KI+GQ + +V++ +L+IIDQHA E+ +E TL
Sbjct: 487 AEKPQQLNFFEEKLLEPQAKAEHKIIGQVFDTYWLVEFHDNLYIIDQHAAHERVLYEQTL 546
Query: 249 Q--KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPM 306
+ KT SQ + P L+L+ +L+ + F + GFE D + + ++P
Sbjct: 547 KGMKTREFTSQLISPPIILNLSMQEAELLRLYMDQFTRIGFEIEEFGQD--SYAVRAVPD 604
Query: 307 SKNTTLGREDIEELLFMLQHTNSTEHCRPSR-IRAMFASRACRKSVMIGRALSVGEMTGL 365
+ + +E + E++ L ++ PS I AS +C+ +V LS E+ L
Sbjct: 605 NLFSIAKKELLMEMIDSL--SDEINRNAPSNLIDEKIASMSCKAAVKGNMRLSAAEVDTL 662
Query: 366 VRNMGRIDQPW 376
+ + +D P+
Sbjct: 663 ITELLSLDNPY 673
>gi|335429544|ref|ZP_08556442.1| DNA mismatch repair protein [Haloplasma contractile SSD-17B]
gi|334889554|gb|EGM27839.1| DNA mismatch repair protein [Haloplasma contractile SSD-17B]
Length = 627
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 86/385 (22%), Positives = 161/385 (41%), Gaps = 55/385 (14%)
Query: 1 MKLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITD 59
+K VNE YH + H+YP ++L++++ VDVNV P K + + +E A +K ITD
Sbjct: 264 VKAVNEGYHTYLPQHRYPIVVLDMKIDPLLVDVNVHPAKLDVRLSNE----AHIKSVITD 319
Query: 60 SYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQ 119
+N+ +++ + + KI N + +E + V + F Q
Sbjct: 320 L-----------INKKLKEL----MYIPKITIPNKKALEEDKGYV---QDKLFQQSVTHQ 361
Query: 120 QSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRC 179
+ + DT D E+ + SYR+ ++D K +D
Sbjct: 362 RDIGNQDSDTQDSISELNAFDQKNANSYRE----------LEDSTK--------NFKDSI 403
Query: 180 VENRFHANIDPSKNKEAESELN---RVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQ 236
E H + S E E++ V K + +GQ ++I + + LF+IDQ
Sbjct: 404 SEQSNHNDYSESTYTETEADSTPKETVTNKKRLPNLDYIGQLGGTYLIAQNEEGLFLIDQ 463
Query: 237 HATDEKYNFE---TLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDS 293
HA E+ N+E + T+ + L+VP L T I+++ V + G + F+
Sbjct: 464 HAAQERINYEFYLSQLSKTINEFYDLLVPITLEFTMNESLIIEERADVLREIGIK--FEK 521
Query: 294 SDDGNVLLTSLPMSKNTTLGREDIEELL-FMLQHTNSTEHCRPSRIRAMFA-SRACRKSV 351
+ ++T LP G+ D + LL + H + ++ A + +C++S+
Sbjct: 522 FGIKSFIVTRLP----NWFGKADEKYLLDTIFDHILREKKLTYKQLFEELAITLSCKRSI 577
Query: 352 MIGRALSVGEMTGLVRNMGRIDQPW 376
++ E+ L+ ++ D P+
Sbjct: 578 KANHYINEYEVKKLLHDLETCDNPY 602
>gi|340027117|ref|ZP_08663180.1| DNA mismatch repair protein [Paracoccus sp. TRP]
Length = 605
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 91/193 (47%), Gaps = 21/193 (10%)
Query: 186 ANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNF 245
A ++P EA+++ ++ Q + +II + + + I+DQHA E+ +
Sbjct: 401 ARVEPEPGGEAQTDAPLGAARA---------QLHENWIIAQTANGIVIVDQHAAHERLVY 451
Query: 246 ETL---QKTTLIKSQKLVVPQNLHLTKIN-QCILKDNLPVFYKNGFEFSF--DSSDDGNV 299
E L Q+T I SQ L++P+ + L++ + Q IL + E + G V
Sbjct: 452 ERLKAQQETNGIASQALLIPEIVELSEADAQRILS-----IAGDLAELGLVIEPFGGGAV 506
Query: 300 LLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSV 359
+ +P+ + I ++L L ++E R +R+ A+ +S AC SV GR ++
Sbjct: 507 AVREVPVLVKRLNVQRLIRDILDDLADQGTSERLR-ARVDAVLSSMACHGSVRSGRRMTA 565
Query: 360 GEMTGLVRNMGRI 372
EM L+R M R+
Sbjct: 566 DEMNALLREMERV 578
>gi|421542737|ref|ZP_15988843.1| DNA mismatch repair protein mutL [Neisseria meningitidis NM255]
gi|402316656|gb|EJU52198.1| DNA mismatch repair protein mutL [Neisseria meningitidis NM255]
Length = 658
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 95/400 (23%), Positives = 171/400 (42%), Gaps = 68/400 (17%)
Query: 1 MKLVNEVYHQ-FNNHQYPFIILNIEMSRDSVDVNVTPDKRQI-FMDHEK---LLLATVKV 55
+ V + Y +N P +L +++ ++VDVNV P K +I F D + L+ T+
Sbjct: 264 LHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSRQVHQLVFHTLNK 323
Query: 56 HITDSYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETI-----PVPSEDNS 110
+ D+ A ++ +S+ SN+ EV H+ P+PSE++S
Sbjct: 324 ALADTRA--------DLTESV---------------SNAGEVLHDITGVTPAPMPSENDS 360
Query: 111 -NFSHEANLQQSPETVEPDTPDETIEVIDDMPR-LQGSYRQSTPVTLSLDIIQDQLKAR- 167
N + A+ P +PDT + P Q +Y P SL + + +
Sbjct: 361 ENLFNRAS--DYPTGNKPDTRNAFGASGKTAPMPYQSAY---APQQRSLSLRESRAAMNT 415
Query: 168 YARRTVQAQDRCVE-NRFH----ANIDPSKNKEAESEL---NRVIKKSMFEKMKIVGQFN 219
YA + D +E +RF N+ PS+ +++ + + S +
Sbjct: 416 YAELYKKTDDADLELSRFEQARFGNM-PSETPAPQTDTPLSDGIPSPSELPPLGFAIAQL 474
Query: 220 LG-FIIVKYDSDLFIIDQHATDEKYNFETL----QKTTLIKSQKLVVPQNLHLTKINQCI 274
LG +I+ + + L +ID HA E+ N+E + Q+ ++SQ+L++P +
Sbjct: 475 LGIYILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGKLQSQRLLIPVTFAASHEECAA 534
Query: 275 LKDNLPVFYKNGFEFSFDSSDDGNVL-LTSLPMSKNTTLGREDI----EELLFMLQHTNS 329
L D G E S GN L + ++P LG+ D+ +++L L S
Sbjct: 535 LADYAETLAGFGLEL---SDMGGNTLAVRAVP----AMLGKADVVSLAKDVLNELAQVGS 587
Query: 330 TEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
++ R + A+ +C S+ GR L++ EM L+R+M
Sbjct: 588 SQTIEEHENR-ILATMSCHGSIRAGRRLTLPEMNALLRDM 626
>gi|126642159|ref|YP_001085143.1| methyl-directed mismatch repair enzyme [Acinetobacter baumannii
ATCC 17978]
gi|126388043|gb|ABO12541.1| methyl-directed mismatch repair enzyme [Acinetobacter baumannii
ATCC 17978]
Length = 369
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 79/368 (21%), Positives = 150/368 (40%), Gaps = 46/368 (12%)
Query: 11 FNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGN 70
+ HQ+ +L +E+ +++DVNV P K +I +++ + V+ + ++ A F
Sbjct: 7 LHGHQHSSYLLFLEVDPENIDVNVHPTKHEIRFLNQREVHEFVRHYAKETLA-QFQTASA 65
Query: 71 NMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETV--EPD 128
++ Q+M+ D ++ ++ + + H T Q+ +T +P+
Sbjct: 66 DLAQAMKVDDIQNLSVQPQPKYQEQFTLHRTA-----------------QAADTAVDKPN 108
Query: 129 TPDETIEVIDDM--PRLQG-SYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFH 185
+ E++ D R Q Y + TP + + LK A Q + V+
Sbjct: 109 GYQPSTELLTDFNNSRPQAVHYAEQTPKYNGSAQLNNALKTYLAPLRDQPTNFSVDE--- 165
Query: 186 ANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNF 245
NI+P V K F + Q + +I+ + L I+D HA E+
Sbjct: 166 -NIEP------------VAKVDEFPLGIAIAQLHGIYILAQNTEGLIIVDMHAAHERILL 212
Query: 246 ETLQ----KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLL 301
+ ++ K SQ+L++P+ + ++++ ++D P + G E D D V++
Sbjct: 213 QQMKNAWDKPEFWTSQQLLIPKVISISRMQAVRVEDLKPQLERLGLE--IDLYGDEQVIV 270
Query: 302 TSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGE 361
+P I ELL L + + R + A AC +V R LS+ E
Sbjct: 271 RGVPAILQKADFENLIPELLNDLDPNDEAQGLLQKR-DELLAGMACHGAVRAHRQLSLSE 329
Query: 362 MTGLVRNM 369
M L+R M
Sbjct: 330 MNALLRQM 337
>gi|335040814|ref|ZP_08533935.1| DNA mismatch repair protein mutL [Caldalkalibacillus thermarum
TA2.A1]
gi|334179249|gb|EGL81893.1| DNA mismatch repair protein mutL [Caldalkalibacillus thermarum
TA2.A1]
Length = 637
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 86/398 (21%), Positives = 164/398 (41%), Gaps = 74/398 (18%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDH----EKLLLATVKVH 56
+ + + YH H+YP ++L+++M +DVNV P K +I + + L +K
Sbjct: 266 RAILQAYHTLLPAHRYPVVLLSLKMDPSLLDVNVHPAKLEIRLSKENELLEWLEEEIKRT 325
Query: 57 ITDSYAIGFTVDGNNMNQSMEQDP---SSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFS 113
+ + I + + P + D+ + + + S EEV+ P++DNS
Sbjct: 326 LREHCLIPSPLSSMKRRTQGQHKPVQQTLDLSLPQEKHSRPEEVQK-----PNDDNS--V 378
Query: 114 HEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTV 173
H++++Q S + PD+ I D G Y ++ + V
Sbjct: 379 HQSHVQHSSQ------PDQ----IHDQ---SGEYTETEGL------------------PV 407
Query: 174 QAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKI---VGQFNLGFIIVKYDSD 230
+ +++ + H +P K E + +K+ EK+ + +GQ + +I+ + +
Sbjct: 408 KEEEKLGKQTSHPVTEPPAAKAMEQPVAEQMKRPA-EKIPLLYPIGQLHGTYILAQNEEG 466
Query: 231 LFIIDQHATDEKYNFETLQKT---TLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGF 287
L++IDQHA E+ +E + T SQ+L +P L T ++K + + K G
Sbjct: 467 LYMIDQHAAQERIWYEHFTEKLNQTERASQELAIPLVLEFTAGEAALIKKHQSILEKAGL 526
Query: 288 ---EFSFDSSDDGNVLLTS----LPMSKNTTLGREDIEELLFMLQHTNSTEHC--RPSRI 338
EF + ++ S P + L RE I+ F + H E R
Sbjct: 527 FLEEFGHHA-----YMIRSHPNWFPQGEEEALIREMID---FAIHHKGKLEWMTFRDEVA 578
Query: 339 RAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+ M AC++S+ + L+ EM L+ + P+
Sbjct: 579 KMM----ACKQSIKANQYLTRKEMEALLEKLRLSSNPF 612
>gi|258454754|ref|ZP_05702718.1| DNA mismatch repair protein mutL [Staphylococcus aureus A5937]
gi|257863137|gb|EEV85901.1| DNA mismatch repair protein mutL [Staphylococcus aureus A5937]
Length = 669
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 83/404 (20%), Positives = 176/404 (43%), Gaps = 53/404 (13%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K + E YH ++P +NIEM VDVNV P K ++ + E+ L + I ++
Sbjct: 265 KAILEGYHTLLTIGRFPICYINIEMDPILVDVNVHPTKLEVRLSKEEQLYQLIVSKIQEA 324
Query: 61 YAIGFTVDGNNM------NQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSH 114
+ + NN+ N+ + ++ E QR N+E + +T SE++++ S
Sbjct: 325 FKDRILIPKNNLDYVPKKNKVLYSFEQQKIEFE--QRQNTENNQEKTF--SSEESNSKSF 380
Query: 115 EANLQQSPETVEPDTPDETIE------VIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARY 168
A Q ++ D+ + + + DD + R+ +D+ +
Sbjct: 381 MAENQNDEIVIKEDSYNPFVTKTSESLITDDESSGYNNTRE-----------KDEDYFKK 429
Query: 169 ARRTVQAQDRCVENRFHANIDPSKNKEAES--ELNRVIK------KSMFEKMKIVGQFNL 220
++ +Q D+ ++ A++ +NK ++ ++N + K M+IVGQ +
Sbjct: 430 QQKILQEMDQTFDSNEDASVQNYENKASDDYYDVNDIKGTKSKDPKRRIPYMEIVGQVHG 489
Query: 221 GFIIVKYDSDLFIIDQHATDEKYNFETLQKT---TLIKSQKLVVPQNLHLTKINQCILKD 277
+II + + +++IDQHA E+ +E + + Q L++P H +K Q ++
Sbjct: 490 TYIIAQNEFGMYMIDQHAAQERIKYEYFRDKIGEVTNEVQDLLIPLTFHFSKDEQLVIDQ 549
Query: 278 NLPVFYKNGFE---FSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLF-MLQHTNSTEHC 333
YKN + + + +++S P+ ++++EE++ M++ +
Sbjct: 550 -----YKNELQQVGIMLEHFGGHDYIVSSYPV----WFPKDEVEEIIKDMIELILEEKKV 600
Query: 334 RPSRIRAMFA-SRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
++R A +C+KS+ L EM+ L+ + + P+
Sbjct: 601 DIKKLREDVAIMMSCKKSIKANHYLQKHEMSDLIDQLREAEDPF 644
>gi|429204953|ref|ZP_19196234.1| DNA mismatch repair protein [Lactobacillus saerimneri 30a]
gi|428146815|gb|EKW99050.1| DNA mismatch repair protein [Lactobacillus saerimneri 30a]
Length = 655
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 118/269 (43%), Gaps = 27/269 (10%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMNQ 74
+YP +LNIE++ VDVNV P K+++ + E+ L H+ ++ N +
Sbjct: 279 RYPIAVLNIELNPLLVDVNVHPTKQEVRISKEEQL-----THLIETTIANRLTTENLIPD 333
Query: 75 SMEQ-DPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPDET 133
++E + VD+ ++Q + E + S A Q P+ DTP E
Sbjct: 334 ALENLHANKKVDLVQLQAGMAAAFEDSQTDKREKQLSEAGSTAYYQ--PQEGPLDTPAEV 391
Query: 134 IEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKN 193
E D P P T+ II++ KA + VQ D+ + H + +
Sbjct: 392 RE--DAGPE---------PPTV---IIKN--KADLTKPLVQKWDQKYSAKEHTSATEPNS 435
Query: 194 KEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETL-QKTT 252
+ +E + + F ++K +GQ + +++ + + L+I+DQHA E+ +E QK
Sbjct: 436 ELVPAEQTEAGETARFPELKYIGQMHGTYLLAESPAGLYIVDQHAAQERIKYEYFRQKIG 495
Query: 253 LIK--SQKLVVPQNLHLTKINQCILKDNL 279
+ QKL++P L + +K NL
Sbjct: 496 EVSPDQQKLLLPIVLTYPVTDMVRIKPNL 524
>gi|385305328|gb|EIF49315.1| atp-binding protein required for mismatch repair in mitosis and
meiosis [Dekkera bruxellensis AWRI1499]
Length = 414
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 38/53 (71%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVK 54
K VNE+Y +FN+ QYP I+L + M + VD+NVTPDKR + + +E +L +++
Sbjct: 285 KAVNEMYKKFNHLQYPMIVLXLFMDQKFVDINVTPDKRTVMVSNEAKILESLR 337
>gi|402825829|ref|ZP_10875082.1| DNA mismatch repair protein [Sphingomonas sp. LH128]
gi|402260647|gb|EJU10757.1| DNA mismatch repair protein [Sphingomonas sp. LH128]
Length = 602
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 13/163 (7%)
Query: 216 GQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKT----TLIKSQKLVVPQNLHLTKIN 271
GQ +I+ + + L I+DQHA E+ E L+ + +SQ L++P+ + L +
Sbjct: 417 GQVAGTYIVAEAEDGLVIVDQHAAHERLVLEKLKAAGAEEAMNRSQALLLPEVVELEEAA 476
Query: 272 QCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQ---HTN 328
L+D L ++G + +L+ ++P + L + D+ L+ + N
Sbjct: 477 CDALEDKLADLARHGL--ILERFGPAAMLVRAVP----SVLSKSDVGALVQDVADDLARN 530
Query: 329 STEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGR 371
++ + A+ AC SV GR LSV EM L+R M R
Sbjct: 531 GDALLLGEKLDLVLATMACHGSVRAGRLLSVAEMNALLREMER 573
>gi|270291963|ref|ZP_06198178.1| DNA mismatch repair protein HexB [Streptococcus sp. M143]
gi|270279491|gb|EFA25333.1| DNA mismatch repair protein HexB [Streptococcus sp. M143]
Length = 649
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/367 (20%), Positives = 158/367 (43%), Gaps = 39/367 (10%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMNQ 74
++P +++I + DVNV P K+++ + EK L+A V I++S Q
Sbjct: 280 RFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMALVSEAISNSL----------REQ 329
Query: 75 SMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPDETI 134
++ P + ++ K N ++VE +P+ ++N+ + + L + + + D +
Sbjct: 330 AL--IPDALENLAKSTVRNRQKVEQTILPL--KENTLYYEKTELSKPSQA---EVADHQV 382
Query: 135 EVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKNK 194
E+ D+ L ++ +LD + K +A R D+ H +D +
Sbjct: 383 ELTDEGQDLTLFAKE------TLDQLTKPAKLHFAERKPANYDQLD----HPELDLASLD 432
Query: 195 EAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL- 253
+A +L R + S F +++ GQ + ++ + L+IIDQHA E+ +E +++
Sbjct: 433 KAYDKLERE-ESSSFPELEFFGQMHGTYLFAQGRDGLYIIDQHAAQERVKYEEYRESIGN 491
Query: 254 --IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTT 311
Q+L+VP + LK+ +P+ + G + + +L P+
Sbjct: 492 VDQSQQQLLVPYIFEFPADDALRLKERMPLLEEVGVFLA--EYGENQFILREHPI----W 545
Query: 312 LGREDIEELLF-MLQHTNSTEHCRPSRIRAMFA-SRACRKSVMIGRALSVGEMTGLVRNM 369
+ E+IE ++ M T+ + RA A +C++S+ + L+ +
Sbjct: 546 MAEEEIESGIYEMCDMLLLTKEVSIKKYRAELAIMMSCKRSIKANHRIDDHSARQLLYQL 605
Query: 370 GRIDQPW 376
+ D P+
Sbjct: 606 SQCDNPY 612
>gi|417656649|ref|ZP_12306332.1| DNA mismatch repair protein, C-terminal domain protein
[Staphylococcus epidermidis VCU028]
gi|418664718|ref|ZP_13226184.1| DNA mismatch repair protein [Staphylococcus epidermidis VCU081]
gi|329736310|gb|EGG72582.1| DNA mismatch repair protein, C-terminal domain protein
[Staphylococcus epidermidis VCU028]
gi|374410164|gb|EHQ80925.1| DNA mismatch repair protein [Staphylococcus epidermidis VCU081]
Length = 645
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 160/387 (41%), Gaps = 43/387 (11%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K + E YH ++P +NI+M VDVNV P K ++ + E L + I ++
Sbjct: 265 KAILEGYHTLLTIGRFPICYINIQMDPILVDVNVHPTKLEVRLSKEDQLYDLIVTKIREA 324
Query: 61 YAIGFTVDGNNMNQS------MEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNF-S 113
+ + N++N + +E ++ EK Q+S E + + N + S
Sbjct: 325 FKDKILIPQNDLNHAPKKNKVLETFEQQKINFEK-QQSQIGETSAPYVHDQKDKNHDVES 383
Query: 114 HEANLQQSPETVEPDTPDETIEVIDDMPR-LQGSYRQSTPVTLSLDIIQDQLKARYARRT 172
H+ NL + T +E+ EV +++ + SY QS L D+ Q+ Y
Sbjct: 384 HKNNLDSTSLT-----NNESTEVSNELHNYIDDSYLQSQKEVL-FDMEQNT-SNEYEISN 436
Query: 173 VQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLF 232
Q+ D K +++ RV M+IVGQ + +II + ++ +F
Sbjct: 437 QQSND-------------IKGTVSQTPHRRV------PYMEIVGQVHGTYIIAQNENGMF 477
Query: 233 IIDQHATDEKYNFETLQKT---TLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEF 289
+IDQHA E+ +E ++ + Q L++P H +K Q I+ K G
Sbjct: 478 MIDQHAAQERIKYEYFREKIGEVTNEVQNLLIPLTFHFSKDEQMIIDQYKDELDKVGVHL 537
Query: 290 SFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRK 349
D ++ S P+ E I++++ ++ S + + A+ S C+K
Sbjct: 538 EHFGGHD--YIVNSYPVWFPKEEAEEIIKDMIELVLKHKSVDVKKIREDAAIMMS--CKK 593
Query: 350 SVMIGRALSVGEMTGLVRNMGRIDQPW 376
S+ L EM L+ + + P+
Sbjct: 594 SIKANHYLKNNEMADLIDQLREAEDPF 620
>gi|323489620|ref|ZP_08094847.1| DNA mismatch repair protein [Planococcus donghaensis MPA1U2]
gi|323396751|gb|EGA89570.1| DNA mismatch repair protein [Planococcus donghaensis MPA1U2]
Length = 606
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 82/172 (47%), Gaps = 8/172 (4%)
Query: 209 FEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETL-QKTTLIKS---QKLVVPQN 264
F ++++VGQ + +I+ + + ++IDQHA E+ +E +K I S Q L++P
Sbjct: 413 FPELEVVGQIHGTYIVAQSNDGFYLIDQHAAQERIKYEYFREKVGDIDSNERQALLLPLT 472
Query: 265 LHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFML 324
H ++ LKD+LPV +G + D + ++ P +E IE+L+ +
Sbjct: 473 FHYSRDEALRLKDHLPVLTDSG--VFLEEFGDTSFIVREYPTWFPKGFEQEVIEDLIEQI 530
Query: 325 QHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+ + A+ S C++S+ L EM L+ ++ + +QP+
Sbjct: 531 LTERKVDVKKLREDAAIMMS--CKRSIKANHFLQKHEMERLLMDLKKAEQPF 580
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 17/134 (12%)
Query: 4 VNEVYHQFNN-HQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYA 62
V++ YH F + P +++NIE DVNV P K+QI + EK L+ +H T
Sbjct: 266 VHKAYHTFLPLERQPIVVMNIEGDPYLTDVNVHPAKQQIRLSKEKELMEL--IHETLRRT 323
Query: 63 IGFTVDGNNMN--QSMEQDPSSDVDM------------EKIQRSNSEEVEHETIPVPSED 108
I V ++ + ++Q P+ +D+ E +QR + VE E + VP +
Sbjct: 324 ISTVVRAPVIDKPKPVKQAPTRQLDLWKSSFTVQEAKEEPVQRYSEVPVEQEKVVVPQDK 383
Query: 109 NSNFSHEANLQQSP 122
++Q+P
Sbjct: 384 ERVQQDFPTIEQTP 397
>gi|58616937|ref|YP_196136.1| DNA mismatch repair protein [Ehrlichia ruminantium str. Gardel]
gi|58416549|emb|CAI27662.1| DNA mismatch repair protein MutL [Ehrlichia ruminantium str.
Gardel]
Length = 689
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 97/414 (23%), Positives = 176/414 (42%), Gaps = 67/414 (16%)
Query: 3 LVNEVYHQFNNH----QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHIT 58
LV V + +++ +YP ++L I M D VD NV P+K ++ ++L+ V I
Sbjct: 265 LVGAVRYAYSDFIERDKYPIVVLYINMPYDQVDTNVHPNKSEVRFQDKRLIYKVVVNAIK 324
Query: 59 DSYAIG----FTVDGNNMNQSMEQDPSSDVDMEKI--------------QRSNSEEVEHE 100
++ A+ F D N + E+D + V + Q S + + ++
Sbjct: 325 NALAVKMNNKFRSDNNFSDDPFEKDNIAKVKNSSVNSPSFQFLVPSSHEQSSENNKEQYS 384
Query: 101 TIP---VPSEDNSNFSHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSL 157
I +P+ D F NL + +T D I V DD+ ++ +
Sbjct: 385 CISDFRIPNSDKQLFIRN-NLSVKSDQTLSNTSD--ISVNDDLKEFFVLQNKTQIEGYKI 441
Query: 158 DI-IQDQLKARYARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMK--I 214
D I +Q + + T ++ D +N+D + + LN V KS+ K + +
Sbjct: 442 DTSILNQGNECF-KLTGKSHD------IISNVDNKREHDIHLSLNAV-PKSIGHKQENTL 493
Query: 215 VGQFNLGF---------IIVKYDSDLFIIDQHATDEKYNFETLQKTT---LIKSQKLVVP 262
V + LG+ II + + I+DQHA E+ +E +++ +K Q L++P
Sbjct: 494 VDCYPLGYAICQVHSRYIIAQTKDGIVIVDQHAAHERLIYEYMKQVMEKEGVKRQILLIP 553
Query: 263 QNLHLTKINQCILKDNLPVFYKNGFEFS---FDSSDDGNVLLTSLPMSKNTTLGREDIEE 319
+ + + N C L+ L + YKN +S D +V++ +P G D++
Sbjct: 554 EVVEMN--NGCDLE--LLMEYKNKLLKLGLLIESLGDLSVIVREVP----AVFGSFDVKA 605
Query: 320 LLF----MLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
L+F + T ++I+ + + AC S+ GR L + EM L+RNM
Sbjct: 606 LIFHILDSIAEVGDTLFLN-NKIKDICGTIACYSSIRSGRKLKIEEMNALLRNM 658
>gi|449104721|ref|ZP_21741459.1| DNA mismatch repair protein MutL [Treponema denticola AL-2]
gi|448962857|gb|EMB43543.1| DNA mismatch repair protein MutL [Treponema denticola AL-2]
Length = 605
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 142/340 (41%), Gaps = 71/340 (20%)
Query: 11 FNNHQYP--FIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVD 68
F N +P F+ LN++ R VD N+ P KR+ + K + ++ I+ Y D
Sbjct: 274 FPNGGFPAAFVFLNVDPER--VDFNIHPAKREAKFEDYKEIHHSLSSTISSFYKQKTVSD 331
Query: 69 GNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPD 128
+ +S + + + D EK + + ++ P +++ LQ S +T P
Sbjct: 332 --LLKESYQPEYTRGFDFEKTEY-EAADLNQSYNPAGTKNY--------LQNSTKTYWPS 380
Query: 129 TPDETIE---VIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFH 185
+P + IE ++P Q Y S Q +L A + QD
Sbjct: 381 SPIKQIETSTAFQEIP--QADYGASA--------AQHRLSAAAYETSAVPQD-------- 422
Query: 186 ANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNF 245
+ KS F K +GQF FI V+ ++ L+IIDQHA E+ F
Sbjct: 423 ------------------LPKSDF---KFLGQFCGTFIAVEKNNALYIIDQHAAHERILF 461
Query: 246 ETLQKTTLIKSQKLVVPQNLHL-TKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSL 304
E L+K +L SQ+L++P + ++ + I++ NL K GF S G ++ ++
Sbjct: 462 EGLKK-SLGPSQELLIPYRIETESEKDDEIIRLNLQELQKAGFNIS--EEKKGLWIIRAV 518
Query: 305 PMSKNTTLGREDIEELLF--------MLQHTNSTEHCRPS 336
P+ T +D++E L ++ H + CR +
Sbjct: 519 PIRWQGT--EKDLKEDLAGSGKDPSGLMHHILARSACRAA 556
>gi|170111214|ref|XP_001886811.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164638169|gb|EDR02448.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 365
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKV 55
K NEVY FN +Q PFI+ + + +S D+N++PDKR IF+ +E L++ +KV
Sbjct: 303 KAFNEVYRTFNANQVPFILADFILPTESCDINLSPDKRTIFLHNEGNLISALKV 356
>gi|317052213|ref|YP_004113329.1| DNA mismatch repair protein MutL [Desulfurispirillum indicum S5]
gi|316947297|gb|ADU66773.1| DNA mismatch repair protein MutL [Desulfurispirillum indicum S5]
Length = 595
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 77/171 (45%), Gaps = 8/171 (4%)
Query: 212 MKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFET---LQKTTLIKSQKLVVPQNLHLT 268
+I+GQF FI+ D +L ++DQHA E+ NFE L ++ Q L+ P + LT
Sbjct: 406 FQILGQFQDTFIVGIKDEELILVDQHAAMERINFEEISDLYADNRVEQQPLLFPHPIGLT 465
Query: 269 KINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFML--QH 326
Q L ++P G F+ D DD L P+ + I E+ +
Sbjct: 466 PQEQLTLNTHMPQLQAMG--FTIDIIDD-TACLVEAPLDLPPQQAMDTIREICSRAGEEK 522
Query: 327 TNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPWV 377
+ E + S + + + AC +SV + L+ +M L++ + + QP+
Sbjct: 523 DDQPESAQESFRQLVMKTMACHRSVKANKTLNHQQMEELLQRLFQCRQPYT 573
>gi|420201991|ref|ZP_14707586.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM018]
gi|394269964|gb|EJE14487.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM018]
Length = 645
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 90/393 (22%), Positives = 165/393 (41%), Gaps = 55/393 (13%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K + E YH ++P +NI+M VDVNV P K ++ + E L + I ++
Sbjct: 265 KAILEGYHTLLTIGRFPICYINIQMDPILVDVNVHPTKLEVRLSKEDQLYDLIVTKIREA 324
Query: 61 YAIGFTVDGNNMNQS------MEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNF-S 113
+ + N++N + +E ++ EK Q+S E + + N + S
Sbjct: 325 FKDKILIPQNDLNHAPKKNKVLETFEQQKINFEK-QQSQIGETSAPYVHDQKDKNHDVES 383
Query: 114 HEANLQQSPETVEPDTPDETIEVIDDMP-RLQGSYRQSTPVTLSLDIIQDQLKARYARRT 172
H+ NL + T +E+ EV +++ + SY QS L D+ Q+ Y
Sbjct: 384 HKNNLDSTS-----STNNESTEVSNELHNHIDDSYLQSQKEVL-FDMEQNT-SNEYEILN 436
Query: 173 VQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLF 232
Q+ D K +++ RV M+IVGQ + +II + ++ +F
Sbjct: 437 QQSND-------------IKGTVSQTPHRRV------PYMEIVGQVHGTYIIAQNENGMF 477
Query: 233 IIDQHATDEKYNFETLQKT---TLIKSQKLVVPQNLHLTKINQCILK------DNLPVFY 283
+IDQHA E+ +E ++ + Q L++P H +K Q I+ DN+ V
Sbjct: 478 MIDQHAAQERIKYEYFREKIGEVTNEVQNLLIPLTFHFSKDEQMIIDQYKDELDNVGVHL 537
Query: 284 KNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFA 343
++ F D ++ S P+ E I++++ ++ S + + A+
Sbjct: 538 EH-----FGGHD---YIVNSYPVWFPKEEAEEIIKDMIELVLKHKSVDVKKIREDAAIMM 589
Query: 344 SRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
S C+KS+ L EM L+ + + P+
Sbjct: 590 S--CKKSIKANHYLKNNEMADLIDQLREAEDPF 620
>gi|297617260|ref|YP_003702419.1| DNA mismatch repair protein MutL [Syntrophothermus lipocalidus DSM
12680]
gi|297145097|gb|ADI01854.1| DNA mismatch repair protein MutL [Syntrophothermus lipocalidus DSM
12680]
Length = 571
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 83/156 (53%), Gaps = 11/156 (7%)
Query: 214 IVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQK-TTLIKSQKLVVPQNLHLTKINQ 272
++GQ+ ++IV +L+++DQHA E+ ++ ++K T +Q LV+P +L L
Sbjct: 390 VLGQWLRTYVIVSAGEELWLVDQHAAHERVLYDRMRKDQTPENTQPLVIPVSLSLPASKM 449
Query: 273 CILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGR--EDIEELLFMLQHTNST 330
+L++NL G+ F+ D +V++ S+P S + GR E ++ +L +L +
Sbjct: 450 EVLENNLETL--RGYGFNLDVLGYNSVVIRSVPSSVS---GREAEALDRVLEVLVEGRTE 504
Query: 331 EHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLV 366
+ ++ + + AC+ ++ G L+ EM+ L+
Sbjct: 505 DGSLGEKV---WTALACKGAIKAGTCLAPEEMSRLL 537
>gi|448607731|ref|ZP_21659684.1| DNA mismatch repair protein MutL [Haloferax sulfurifontis ATCC
BAA-897]
gi|445737668|gb|ELZ89200.1| DNA mismatch repair protein MutL [Haloferax sulfurifontis ATCC
BAA-897]
Length = 565
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 88/188 (46%), Gaps = 14/188 (7%)
Query: 197 ESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQ---KTTL 253
+S L V S+F+ ++++G+F +++ + +L ++DQHA E+ N+E L+ ++
Sbjct: 355 DSSLAPVEAASVFDDLRVIGRFRGLYLLCEAGDELLVVDQHAAHERINYERLREAVESAG 414
Query: 254 IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGF---EFSFDSS-DDGNVLLTSLPMSKN 309
++S + P + L+ + +L N + K GF EF S G + ++P
Sbjct: 415 VESVAVDPPATVSLSPTDAALLDANRDLVEKLGFRVAEFGDGSRIGTGTYRVEAVPAPLG 474
Query: 310 TTLGREDIEELLFMLQHTNSTEHCRPSRIRA-MFASRACRKSVMIGRALSVGEMTGLVRN 368
+ + +++ + + T+ RA + + AC S+ G L+ E +V
Sbjct: 475 RPFAPDALADVVADVASGDDTDP------RAELLSDLACHPSIKAGDDLTDDEAARVVER 528
Query: 369 MGRIDQPW 376
+G + P+
Sbjct: 529 LGSCETPY 536
>gi|429192644|ref|YP_007178322.1| DNA mismatch repair protein MutL [Natronobacterium gregoryi SP2]
gi|448326552|ref|ZP_21515904.1| DNA mismatch repair protein MutL [Natronobacterium gregoryi SP2]
gi|429136862|gb|AFZ73873.1| DNA mismatch repair protein MutL [Natronobacterium gregoryi SP2]
gi|445611277|gb|ELY65033.1| DNA mismatch repair protein MutL [Natronobacterium gregoryi SP2]
Length = 719
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 73/170 (42%), Gaps = 6/170 (3%)
Query: 212 MKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQK--TTLIKSQKLVVPQNLHLTK 269
++++GQF +I+ + L +IDQHA DE+ N+E LQ+ + +Q L P L LT
Sbjct: 523 LRVLGQFGDTYIVCETPDGLALIDQHAADERVNYERLQEAFASDPPAQALAEPVELELTA 582
Query: 270 INQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELL--FMLQHT 327
+ G F + DD V +T++P TL E + ++L F+
Sbjct: 583 AEAEAFAGYSEALERLG--FYANRVDDRTVAVTTVPAVLEETLEPEHLRDVLTSFVEGDR 640
Query: 328 NSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPWV 377
+ + AC SV +L+ G + L+ + + P+
Sbjct: 641 EAGAETVDALADEFLGDLACYPSVTGNTSLTEGSVVDLLAALDDCENPYA 690
>gi|222056190|ref|YP_002538552.1| DNA mismatch repair protein [Geobacter daltonii FRC-32]
gi|254766168|sp|B9M3N0.1|MUTL_GEOSF RecName: Full=DNA mismatch repair protein MutL
gi|221565479|gb|ACM21451.1| DNA mismatch repair protein MutL [Geobacter daltonii FRC-32]
Length = 598
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 204 IKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQ---KTTLIKSQKLV 260
+++ F + ++GQFN +I+ + + L IIDQHA E+ FE L+ ++SQ+L+
Sbjct: 403 VERGYFSGLSVIGQFNAAYILCQDGNSLVIIDQHAAHERVAFERLKTQHAAMGVESQRLL 462
Query: 261 VPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEEL 320
P+ + + +++++ + G FS + LL ++P + G + ++ L
Sbjct: 463 FPETVEFSFKEGAVIREHQTELDRVG--FSLEEFGGSTWLLNAVP---HLLSGNDYVKTL 517
Query: 321 LFMLQHTNSTEHCRPSR--IRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
+L+ S R + + + A AC V LS E+ L + M
Sbjct: 518 RDILEELQSLGRSRSFQDILEDILARIACHSVVRGSHCLSQQEIKALFQQM 568
>gi|322388580|ref|ZP_08062180.1| exopolyphosphatase [Streptococcus infantis ATCC 700779]
gi|419843708|ref|ZP_14367016.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus infantis ATCC 700779]
gi|321140500|gb|EFX36005.1| exopolyphosphatase [Streptococcus infantis ATCC 700779]
gi|385702605|gb|EIG39747.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus infantis ATCC 700779]
Length = 649
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 82/369 (22%), Positives = 158/369 (42%), Gaps = 43/369 (11%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMNQ 74
++P +++I++ DVNV P K+++ + E+ L+A V I S Q
Sbjct: 280 RFPLAVIHIQIDPYLADVNVHPTKQEVRISKERELMALVSEAIAKSLK----------EQ 329
Query: 75 SMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPDETI 134
++ P + ++ K N E+VE T+P+ +N+ + +E N EP+ P +
Sbjct: 330 TL--IPDALENLAKSTVRNREKVEQTTLPL--RENTLY-YEKN--------EPNRPTQA- 375
Query: 135 EVIDDMPRLQGSYRQSTPVTL--SLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSK 192
EV D L RQ + +LD + K +A R D+ H +D +
Sbjct: 376 EVADHQVNLTEE-RQDLNLFAKETLDQMTKPAKLHFAERKTANYDQLD----HPELDLAS 430
Query: 193 NKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTT 252
+A +L R + S F +++ GQ + ++ + L+IIDQHA E+ +E +++
Sbjct: 431 LDKAYDKLERE-ESSSFPELEFFGQMHGTYLFAQGRDGLYIIDQHAAQERVKYEEYRESI 489
Query: 253 L---IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKN 309
Q+L+VP + LK+ +P+ + G + + +L P+
Sbjct: 490 GNVDQSQQQLLVPYIFEFPADDALRLKERMPLLEEVGVFLA--EYGENQFILREHPI--- 544
Query: 310 TTLGREDIEELLF-MLQHTNSTEHCRPSRIRAMFA-SRACRKSVMIGRALSVGEMTGLVR 367
+ E+IE ++ M T+ + RA A +C++S+ + L+
Sbjct: 545 -WMAEEEIESGIYEMCDMLLLTKEVSIKKYRAELAIMMSCKRSIKANHRIDDHSARQLLY 603
Query: 368 NMGRIDQPW 376
+ + D P+
Sbjct: 604 QLSQCDNPY 612
>gi|420199079|ref|ZP_14704763.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM031]
gi|394272765|gb|EJE17215.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM031]
Length = 645
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 87/387 (22%), Positives = 160/387 (41%), Gaps = 43/387 (11%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K + E YH ++P +NI+M VDVNV P K ++ + E L + I ++
Sbjct: 265 KAILEGYHTLLTIGRFPICYINIQMDPILVDVNVHPTKLEVRLSKEDQLYDLIVTKIREA 324
Query: 61 YAIGFTVDGNNMNQS------MEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNF-S 113
+ + N++N + +E ++ EK Q+S E + + N + S
Sbjct: 325 FKDKILIPQNDLNHAPKKNKVLETFEQQKINFEK-QQSQIGETSAPYVHDQKDKNHDVES 383
Query: 114 HEANLQQSPETVEPDTPDETIEVIDDMP-RLQGSYRQSTPVTLSLDIIQDQLKARYARRT 172
H+ NL + T +E+ EV +++ + +Y QS L D+ Q+ Y
Sbjct: 384 HKNNLDSTS-----STNNESTEVSNELHNHIDDNYLQSQKEVL-FDMEQNT-SNEYEISN 436
Query: 173 VQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLF 232
Q+ D K +++ RV M+IVGQ + +II + ++ +F
Sbjct: 437 QQSND-------------IKGTVSQTPHRRV------PYMEIVGQVHGTYIIAQNENGMF 477
Query: 233 IIDQHATDEKYNFETLQKT---TLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEF 289
+IDQHA E+ +E ++ + Q L++P H +K Q I+ K G
Sbjct: 478 MIDQHAAQERIKYEYFREKIGEVTNEVQNLLIPLTFHFSKDEQMIIDQYKDELDKVGVHL 537
Query: 290 SFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRK 349
D ++ S P+ E I++++ ++ S + + A+ S C+K
Sbjct: 538 EHFGGHD--YIVNSYPVWFPKEEAEEIIKDMIELVLKHKSVDVKKIREDAAIMMS--CKK 593
Query: 350 SVMIGRALSVGEMTGLVRNMGRIDQPW 376
S+ L EM L+ + + P+
Sbjct: 594 SIKANHYLKNNEMADLIDQLREAEDPF 620
>gi|403677093|ref|ZP_10938914.1| mutL [Acinetobacter sp. NCTC 10304]
Length = 650
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 80/372 (21%), Positives = 154/372 (41%), Gaps = 54/372 (14%)
Query: 11 FNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGN 70
+ HQ+ +L +E+ +++DVNV P K +I +++ + V+ + ++ A F
Sbjct: 288 LHGHQHSSYLLFLEVDPENIDVNVHPTKHEIRFLNQREVHEFVRHYAKETLA-QFQTAST 346
Query: 71 NMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETV--EPD 128
++ Q+++ D + ++ ++ + + H T Q+ +T +P+
Sbjct: 347 DLAQALKVDDTQNLSVQPQPKYQEQFTLHRTA-----------------QAADTAVDKPN 389
Query: 129 TPDETIEVIDDM--PRLQG-SYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFH 185
+ E++ D R Q Y + TP + + LK A Q + V+
Sbjct: 390 GYQPSTELLTDFNNSRPQAVHYAEQTPKYNGSAQLNNALKTYLAPLRDQPANFSVDE--- 446
Query: 186 ANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNF 245
NI+P V K F + Q + +I+ + L I+D HA E+
Sbjct: 447 -NIEP------------VAKVDEFPLGIAIAQLHGIYILAQNTEGLIIVDMHAAHERILL 493
Query: 246 ETLQ----KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLL 301
+ ++ K SQ+L++P+ + ++++ ++D P + G E D D V++
Sbjct: 494 QQMKNAWDKPEFWTSQQLLIPKVISISRMQAIRVEDLKPQLERLGLE--IDLYGDEQVIV 551
Query: 302 TSLPMSKNTTLGREDIE----ELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRAL 357
+P L + D E ELL L + + R + A AC +V R L
Sbjct: 552 RGVP----AILQKADFENLIPELLNDLDPNDEAQGLLQKR-DELLAGMACHGAVRAHRQL 606
Query: 358 SVGEMTGLVRNM 369
S+ EM L+R M
Sbjct: 607 SLSEMNALLRQM 618
>gi|210612718|ref|ZP_03289433.1| hypothetical protein CLONEX_01635 [Clostridium nexile DSM 1787]
gi|210151411|gb|EEA82419.1| hypothetical protein CLONEX_01635 [Clostridium nexile DSM 1787]
Length = 663
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 91/407 (22%), Positives = 170/407 (41%), Gaps = 66/407 (16%)
Query: 2 KLVNEVYHQFN-NHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K + + Y F H+YPF L+ M +DVNV P K ++ +++ +
Sbjct: 266 KAIEDAYKDFTMQHKYPFTALHFTMDGTDLDVNVHPTKMELRFSNQQGVY---------- 315
Query: 61 YAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQ 120
N + +++Q S + +++ ++EV PV +E E +
Sbjct: 316 ---------NFIYNALKQTLSEPELIPRVELPEAKEV-----PVKAEKIVERKQEQPM-- 359
Query: 121 SPETVEPDTPDETIEVIDDM--------PRLQGSYRQSTPV--TLSLDIIQDQL--KARY 168
+P E TP IE ++ R+ ++Q+ V T + +IQ+ + +A
Sbjct: 360 TPVREERKTP--VIEEEKNLDYFMKKMRERVTAYHQQAVEVKPTPAPSVIQENVNYEALP 417
Query: 169 ARRTVQAQDRCVENRFHAN-------IDPSKNKEAESELN------RVIKKSMFEKMKIV 215
A + + E R A + P + K +E +++ K ++ KI+
Sbjct: 418 ASQVAAVKQPVPEQRTVAKEPMPEQAVAPREEKSVVTEKQLDFFEEKLLTKKAAQEYKII 477
Query: 216 GQFNLGFIIVKYDSDLFIIDQHATDEKYNFE-TLQ--KTTLIKSQKLVVPQNLHLTKINQ 272
GQ + +V++ L+IIDQHA E+ +E TL+ K SQ L P L+L+ +
Sbjct: 478 GQLFETYWLVEFHEQLYIIDQHAAHERVLYEKTLRGMKDREFTSQYLSPPIILNLSMQEE 537
Query: 273 CILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQ---HTNS 329
L ++ +F GFE D + + ++P + + RE E+L L H++
Sbjct: 538 EALNTHMDIFTNIGFEIEPFGGD--SYAIRAVPDNLFSIAKRELFTEMLDQLVDGIHSS- 594
Query: 330 TEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
P + AS +C+ +V LS E+ L+ + ++ P+
Sbjct: 595 ---LAPDIVAEKVASMSCKAAVKGNSRLSAAEVETLIGELLELENPY 638
>gi|394987778|ref|ZP_10380617.1| hypothetical protein SCD_00178 [Sulfuricella denitrificans skB26]
gi|393792997|dbj|GAB70256.1| hypothetical protein SCD_00178 [Sulfuricella denitrificans skB26]
Length = 584
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 73/162 (45%), Gaps = 14/162 (8%)
Query: 215 VGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTT---LIKSQKLVVPQNLHLTKIN 271
+GQ + +I+ + L I+D HA E+ +E L+ ++ Q L++P + H ++
Sbjct: 398 LGQLHGVYILAQNAKGLVIVDMHAAHERVTYEKLKAALDNRVVAMQPLLIPVSFHAGALD 457
Query: 272 QCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPM----SKNTTLGREDIEELLFMLQHT 327
+ +++ F GF+ + S + + +LP + L R+ ++EL
Sbjct: 458 VVVAEEHAAAFSALGFDIAMLSPT--TLAVRALPALLQDADPVLLARDLLKEL-----RE 510
Query: 328 NSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
+ R + A+ AC SV R L+V EM L+R M
Sbjct: 511 FGADRVLAERRNELLATLACHASVRANRKLAVPEMNALLREM 552
>gi|350562406|ref|ZP_08931240.1| DNA mismatch repair protein MutL [Thioalkalivibrio thiocyanoxidans
ARh 4]
gi|349779348|gb|EGZ33694.1| DNA mismatch repair protein MutL [Thioalkalivibrio thiocyanoxidans
ARh 4]
Length = 601
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 78/162 (48%), Gaps = 14/162 (8%)
Query: 215 VGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQK----TTLIKSQKLVVPQNLHLTKI 270
+GQ F++ + L ++D HA E+ +E L++ +I+ Q L+VP+ L +T+
Sbjct: 415 IGQVADAFVLAENARGLVLVDMHAAHERITYERLKRDWREARMIR-QPLLVPETLQVTRA 473
Query: 271 NQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPM---SKNTTLGREDIEELLFMLQHT 327
+ + + + GFE D S +V L + P ++ T D+ L L H
Sbjct: 474 EADLAEASAELLRGLGFE--VDRSGPESVTLRAGPALLQGRDLTQLLRDVLADLQQLSHA 531
Query: 328 NSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
+ E + + + ++ AC ++ GR L++ EM L+R+M
Sbjct: 532 DRAE----AALDGVLSTIACHGAIRAGRKLTLPEMNRLLRDM 569
>gi|169633284|ref|YP_001707020.1| methyl-directed mismatch repair protein [Acinetobacter baumannii
SDF]
gi|169152076|emb|CAP00963.1| enzyme in methyl-directed mismatch repair, stimulates binding of
Vsr and MutS to heteroduplex DNA [Acinetobacter
baumannii]
Length = 650
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 80/372 (21%), Positives = 149/372 (40%), Gaps = 54/372 (14%)
Query: 11 FNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGN 70
+ HQ+ +L +E+ +++DVNV P K +I +++ + V+ + ++ A F
Sbjct: 288 LHGHQHSSYLLFLEVDPENIDVNVHPTKHEIRFLNQREVHEFVRHYAKETLA-QFQTASA 346
Query: 71 NMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTP 130
++ Q+M+ D D N S +Q P+ E T
Sbjct: 347 DLAQAMKVD----------------------------DTQNLS----VQPQPKYQEQFTL 374
Query: 131 DETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRC-VENRFHANID 189
T + D Y+ ST + + + Q YA +T + + N +
Sbjct: 375 HRTAQAADTAVDKPNGYQPSTELLTDFNNSRPQ-SVHYAEQTPKYNGSAQLNNALKTYLA 433
Query: 190 PSKNKEA----ESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNF 245
P +++ A + + V K F + Q + +I+ + L I+D HA E+
Sbjct: 434 PLRDQPANFSVDESIEPVPKVDEFPLGIAIAQLHGIYILAQNTEGLIIVDMHAAHERILL 493
Query: 246 ETLQ----KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLL 301
+ ++ K SQ+L++P+ + ++++ ++D P + G E D D V++
Sbjct: 494 KQMKNAWDKPEFWTSQQLLIPKVISISRMQAVRVEDLKPQLERLGLE--IDLYGDEQVIV 551
Query: 302 TSLPMSKNTTLGREDIE----ELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRAL 357
+P L + D E ELL L + + R + A AC +V R L
Sbjct: 552 RGVP----AILQKADFENLIPELLNDLDPNDEAQGLLQKR-DELLAGMACHGAVRAHRQL 606
Query: 358 SVGEMTGLVRNM 369
S+ EM L+R M
Sbjct: 607 SLSEMNALLRQM 618
>gi|149001722|ref|ZP_01826695.1| DNA mismatch repair protein [Streptococcus pneumoniae SP14-BS69]
gi|147760180|gb|EDK67169.1| DNA mismatch repair protein [Streptococcus pneumoniae SP14-BS69]
Length = 454
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 154/368 (41%), Gaps = 41/368 (11%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMNQ 74
++P +++I + DVNV P K+++ + EK L+ V I +S Q
Sbjct: 85 RFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLK----------EQ 134
Query: 75 SMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPDETI 134
++ P + ++ K N E+VE +P+ ++N+ + E EP P +T
Sbjct: 135 TL--IPDALENLAKSTVRNREKVEQTILPL--KENTLYY---------EKTEPSRPSQT- 180
Query: 135 EVIDDMPRLQGSYRQSTPVTL-SLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKN 193
EV D L + T +LD + K +A R D+ H +D +
Sbjct: 181 EVADYQVELTDEGQDLTLFAKETLDRLTKPAKLHFAERKPANYDQLD----HPELDLASI 236
Query: 194 KEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL 253
+A +L R + S F +++ GQ + ++ + L+IIDQHA E+ +E +++
Sbjct: 237 DKAYDKLERE-EASSFPELEFFGQMHGTYLFAQGRDGLYIIDQHAAQERVKYEEYRESIG 295
Query: 254 ---IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNT 310
Q+L+VP + LK+ +P+ + G + + +L P+
Sbjct: 296 NVDQSQQQLLVPYIFEFPADDVLRLKERMPLLEEVGVFLA--EYGENQFILREHPI---- 349
Query: 311 TLGREDIEELLF-MLQHTNSTEHCRPSRIRAMFA-SRACRKSVMIGRALSVGEMTGLVRN 368
+ E+IE ++ M T+ + RA A +C++S+ + L+
Sbjct: 350 WMAEEEIESGIYEMCDMLLLTKEVSIKKYRAELAIMMSCKRSIKANHRIDDHSARQLLYQ 409
Query: 369 MGRIDQPW 376
+ + D P+
Sbjct: 410 LSQCDNPY 417
>gi|418875232|ref|ZP_13429492.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp.
aureus CIGC93]
gi|377770292|gb|EHT94054.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp.
aureus CIGC93]
Length = 669
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 83/404 (20%), Positives = 175/404 (43%), Gaps = 53/404 (13%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K + E YH ++P +NIEM VDVNV P K ++ + E+ L + I ++
Sbjct: 265 KAILEGYHTLLTIGRFPICYINIEMDPILVDVNVHPTKLEVRLSKEEQLYQLIVSKIQEA 324
Query: 61 YAIGFTVDGNNM------NQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSH 114
+ + NN+ N+ + ++ E QR N+E + +T SE++++ S
Sbjct: 325 FKDRILIPKNNLDYVPKKNKVLHSFEQQKIEFE--QRQNTENNQEKTF--SSEESNSKSF 380
Query: 115 EANLQQSPETVEPDTPDETIE------VIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARY 168
A Q ++ D+ + + + DD + R+ +D+ +
Sbjct: 381 MAENQNDEIVIKEDSYNPFVTKTSESLITDDESSGYNNTRE-----------KDEDYFKK 429
Query: 169 ARRTVQAQDRCVENRFHANIDPSKNKEAES--ELNRVIK------KSMFEKMKIVGQFNL 220
+ +Q D+ ++ A++ +NK ++ ++N + K M+IVGQ +
Sbjct: 430 QQEILQEMDQTFDSNDDASVQNYENKASDDYYDVNDIKGTKSKDPKRRIPYMEIVGQVHG 489
Query: 221 GFIIVKYDSDLFIIDQHATDEKYNFETLQKT---TLIKSQKLVVPQNLHLTKINQCILKD 277
+II + + +++IDQHA E+ +E + + Q L++P H +K Q ++
Sbjct: 490 TYIIAQNEFGMYMIDQHAAQERIKYEYFRDKIGEVTNEVQDLLIPLTFHFSKDEQLVIDQ 549
Query: 278 NLPVFYKNGFE---FSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLF-MLQHTNSTEHC 333
YKN + + + +++S P+ ++++EE++ M++ +
Sbjct: 550 -----YKNELQQVGIMLEHFGGHDYIVSSYPV----WFPKDEVEEIIKDMIELILEEKKV 600
Query: 334 RPSRIRAMFA-SRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
++R A +C+KS+ L EM+ L+ + + P+
Sbjct: 601 DIKKLREDVAIMMSCKKSIKANHYLQKHEMSDLIDQLREAEDPF 644
>gi|401564527|ref|ZP_10805414.1| DNA mismatch repair protein, C-terminal domain protein [Selenomonas
sp. FOBRC6]
gi|400188737|gb|EJO22879.1| DNA mismatch repair protein, C-terminal domain protein [Selenomonas
sp. FOBRC6]
Length = 633
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 140/372 (37%), Gaps = 59/372 (15%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K ++ VY +P +L IE+ + ++DVNV P K ++ + E + V + D
Sbjct: 268 KAIDNVYRALVPKMGFPLAVLRIEVPQRTIDVNVHPQKTEMKFEDEGRIFKAVYKTVLD- 326
Query: 61 YAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSN------FSH 114
AI + + PS V +E +P+ N F+
Sbjct: 327 -AIRSAAGETAAIAAAVEKPS---------------VHYEAVPLNVGTGMNTGAHGAFAA 370
Query: 115 EANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQL-KARYARRTV 173
+ +P P T + + I P+ Q ++ L QD + AR R
Sbjct: 371 ASPQMNTPPAASPSTHNYAMPPI--RPQTVHEALQWRGQSIDLRAAQDAVGAARMEERDT 428
Query: 174 QAQDRCVENR-FHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLF 232
A EN N+ P +GQ +L +II + L+
Sbjct: 429 LAAASSAENTGIEGNLLP------------------------IGQVDLTYIIAQSAQTLY 464
Query: 233 IIDQHATDEKYNFETLQ-KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSF 291
I+DQHA E+ F+ + I +Q+++V L + +N +F + GF
Sbjct: 465 IVDQHAAHERILFDRFSAQADGIPAQQMLVHAILSFDAHEAQYIDENAELFDRLGFH--L 522
Query: 292 DSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIR-AMFASRACRKS 350
+ + + LT P E I E+L L ++ P+ +R A A+ ACR +
Sbjct: 523 EPAGEREYRLTEAPADIPLDEAEETIREILVSLGDLHA---ATPANLRQAGIATMACRAA 579
Query: 351 VMIGRALSVGEM 362
+ G L++ +M
Sbjct: 580 IKAGEELNMRQM 591
>gi|352104377|ref|ZP_08960343.1| DNA mismatch repair protein [Halomonas sp. HAL1]
gi|350598843|gb|EHA14945.1| DNA mismatch repair protein [Halomonas sp. HAL1]
Length = 644
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 80/180 (44%), Gaps = 18/180 (10%)
Query: 215 VGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL-----IKSQKLVVPQNLHLTK 269
+GQ + +I+ + D L ++D HA E+ +E + KT L + +Q L+VP ++ ++
Sbjct: 457 LGQLHGIYILAQNDQGLVVVDMHAAHERIVYERM-KTQLAAAKGLDAQPLLVPVSIAASR 515
Query: 270 INQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNS 329
+ K G E D + +L+ LP + + ++L L
Sbjct: 516 AEVATAESEQAAIAKLGIEL--DVAGPETLLVRQLPALLSQADPEALVRQMLEELARYGR 573
Query: 330 TEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQP---------WVSMG 380
T H +R+ + ++ AC SV R L++ EM L+R+M R ++ W MG
Sbjct: 574 T-HQVEARLHELLSTMACHGSVRANRRLTIEEMNALLRDMERTERSDQCNHGRPTWTQMG 632
>gi|269925916|ref|YP_003322539.1| DNA mismatch repair protein MutL [Thermobaculum terrenum ATCC
BAA-798]
gi|269789576|gb|ACZ41717.1| DNA mismatch repair protein MutL [Thermobaculum terrenum ATCC
BAA-798]
Length = 586
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 94/195 (48%), Gaps = 12/195 (6%)
Query: 185 HANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYN 244
H +I+ S + EA S L ++++GQ L +II + + +++IDQHA E+
Sbjct: 374 HQHIE-STSTEATSSLEEERTLPKLPPLRVLGQIALTYIIAEGPNGMYLIDQHAAHERIL 432
Query: 245 FETLQK---TTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLL 301
E +QK T + SQ L+ P + L +K+ + + GFE +S +++
Sbjct: 433 LERIQKELETDKVASQMLLDPLIITLGDHQATFMKNLVDELNRLGFE--AESFGVKEIIV 490
Query: 302 TSLPMSKNTTLGREDIEELLF-MLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVG 360
S+P L +E++ + + Q N+ + R A+ S ACR ++ G+ LS+
Sbjct: 491 RSIP----AILPKEEVMAFIEDLCQDINNFSNVELRR-NAVAVSLACRSAIKAGQQLSMQ 545
Query: 361 EMTGLVRNMGRIDQP 375
EM L+ + + + P
Sbjct: 546 EMRSLIEQLEQTNFP 560
>gi|433509665|ref|ZP_20466531.1| DNA mismatch repair protein mutL [Neisseria meningitidis 12888]
gi|433511649|ref|ZP_20468472.1| DNA mismatch repair protein mutL [Neisseria meningitidis 4119]
gi|432246166|gb|ELL01623.1| DNA mismatch repair protein mutL [Neisseria meningitidis 12888]
gi|432246410|gb|ELL01858.1| DNA mismatch repair protein mutL [Neisseria meningitidis 4119]
Length = 658
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 94/401 (23%), Positives = 168/401 (41%), Gaps = 70/401 (17%)
Query: 1 MKLVNEVYHQ-FNNHQYPFIILNIEMSRDSVDVNVTPDKRQI-FMDHEK---LLLATVKV 55
+ V + Y +N P +L +++ ++VDVNV P K +I F D ++ L+ T+
Sbjct: 264 LHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSQQVHQLVFHTLNK 323
Query: 56 HITDSYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETI-----PVPSEDNS 110
+ D+ A ++ +S+ SN+ EV H+ P+PSE+NS
Sbjct: 324 ALADTRA--------DLTESV---------------SNAGEVLHDITGVTPAPMPSENNS 360
Query: 111 N--FSHEANLQQSPETVEPDTPDETIEVIDDMPR-LQGSYRQSTPVTLSLDIIQDQLKAR 167
F +N P + DT + P Q +Y P SL + + +
Sbjct: 361 ENLFDRASNY---PTGNKSDTHNAFGSSGKTAPMPYQSAY---APQQRSLSLRESRAAMN 414
Query: 168 -YARRTVQAQD------RCVENRFHANIDPSKNKEAESEL---NRVIKKSMFEKMKIVGQ 217
YA + D R + RF N+ PS+ +++ + + +S +
Sbjct: 415 TYAELYKKTDDIDLELSRFEQARF-GNM-PSEMPIPQTDTPLSDGIPSQSELPPLGFAIA 472
Query: 218 FNLG-FIIVKYDSDLFIIDQHATDEKYNFETLQK----TTLIKSQKLVVPQNLHLTKINQ 272
LG +I+ + + L +ID HA E+ N+E +++ ++SQ+L++P +
Sbjct: 473 QLLGIYILAQAEDSLLLIDMHAAAERVNYEKMKRQRRENGRLQSQRLLIPATFAASHEEC 532
Query: 273 CILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDI----EELLFMLQHTN 328
L D+ G E S GN L + LG+ D+ +++L L
Sbjct: 533 AALADHAETLAGFGLEL---SDMGGNTLAVR---AAPAMLGKADVVSLAKDVLNELAQVG 586
Query: 329 STEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
S++ R + A+ +C SV GR L++ EM L+R+M
Sbjct: 587 SSQTIEEHENR-ILATMSCHGSVRAGRRLTLPEMNALLRDM 626
>gi|353328356|ref|ZP_08970683.1| DNA mismatch repair protein, partial [Wolbachia endosymbiont wVitB
of Nasonia vitripennis]
Length = 295
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 75/152 (49%), Gaps = 11/152 (7%)
Query: 222 FIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHL-TKINQCILKDNLP 280
+II + L I+DQHA E+ +E L++ + IK QKL +P+ + + + ++K
Sbjct: 120 YIIAEVRDKLIIVDQHAAHERLVYECLKEKSSIKRQKL-LPETVEIKNQAGMGMVKTYKD 178
Query: 281 VFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLF-MLQHTNSTEHCRP--SR 337
++ GF+ S D V + +P LG D++E+L ++ E P +
Sbjct: 179 ELFEMGFDIEIQSED--KVTIKEIP----AILGSIDVKEMLIDIVDRLIEIEDTLPIEDK 232
Query: 338 IRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
I + A+ AC S+ GR + + EM L+R +
Sbjct: 233 INKILATIACHGSIRAGRKMKLEEMNELLRQI 264
>gi|314933476|ref|ZP_07840841.1| DNA mismatch repair protein HexB [Staphylococcus caprae C87]
gi|313653626|gb|EFS17383.1| DNA mismatch repair protein HexB [Staphylococcus caprae C87]
Length = 655
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 93/398 (23%), Positives = 163/398 (40%), Gaps = 55/398 (13%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K + E YH +YP +NIEM VDVNV P K ++ + E+ L + I ++
Sbjct: 265 KAILEGYHTLLTIGRYPICYINIEMDPILVDVNVHPTKLEVRLSKEEQLYDLIVEKIREA 324
Query: 61 YAIGFTVDGNNM------NQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSH 114
+ + N++ N+ +E +D EK NSE ++ PSE S+ H
Sbjct: 325 FKDRILIPQNDLDRTPRKNKVLESFGQQKMDFEK---RNSEVAQNGD---PSEHFSSKDH 378
Query: 115 EANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQ 174
N S E E I++ Q T ++LS QD+ + A +Q
Sbjct: 379 FNNTNDS----------EIREGINNY--------QDTNISLSN---QDE-EQENASHNIQ 416
Query: 175 AQDRCVENRFHANI------DPSKNKEAESELNRVIKKSMFEK-------MKIVGQFNLG 221
++ +I D N E+ S IK ++ + M++VGQ +
Sbjct: 417 RSGEDNYSQIQKDILNDMEDDDLSNSESTSNNEGDIKGTVSQNPKRRVPYMEVVGQVHGT 476
Query: 222 FIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKS---QKLVVPQNLHLTKINQCILKDN 278
+II + ++ +F+IDQHA E+ +E + S Q L++P H +K Q I+
Sbjct: 477 YIIAQNENGMFMIDQHAAQERIKYEYFRDKIGEVSNEVQNLLIPLTFHFSKDEQMIIDQY 536
Query: 279 LPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRI 338
K G D ++ S P+ +E I++++ ++ + +
Sbjct: 537 QDELDKVGVHLEHFGGHD--YIVNSYPVWFPKAEAQEIIKDMIELVLDNKKVDVKKIRED 594
Query: 339 RAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
A+ S C+KS+ L EM+ L+ + + P+
Sbjct: 595 AAIMMS--CKKSIKANHYLKNNEMSDLIDQLREAEDPF 630
>gi|169795562|ref|YP_001713355.1| methyl-directed mismatch repair protein [Acinetobacter baumannii
AYE]
gi|213158497|ref|YP_002319795.1| DNA mismatch repair protein MutL [Acinetobacter baumannii AB0057]
gi|215483049|ref|YP_002325254.1| DNA mismatch repair protein MutL family protein [Acinetobacter
baumannii AB307-0294]
gi|301347865|ref|ZP_07228606.1| DNA mismatch repair protein MutL family protein [Acinetobacter
baumannii AB056]
gi|301510580|ref|ZP_07235817.1| DNA mismatch repair protein MutL family protein [Acinetobacter
baumannii AB058]
gi|301596368|ref|ZP_07241376.1| DNA mismatch repair protein MutL family protein [Acinetobacter
baumannii AB059]
gi|332850620|ref|ZP_08432867.1| DNA mismatch repair protein [Acinetobacter baumannii 6013150]
gi|417552239|ref|ZP_12203309.1| DNA mismatch repair protein MutL [Acinetobacter baumannii Naval-81]
gi|417562852|ref|ZP_12213731.1| DNA mismatch repair protein, C-terminal domain protein
[Acinetobacter baumannii OIFC137]
gi|417573929|ref|ZP_12224783.1| DNA mismatch repair protein MutL [Acinetobacter baumannii Canada
BC-5]
gi|421200247|ref|ZP_15657407.1| DNA mismatch repair protein, C-terminal domain protein
[Acinetobacter baumannii OIFC109]
gi|421457353|ref|ZP_15906690.1| DNA mismatch repair protein MutL [Acinetobacter baumannii IS-123]
gi|421622922|ref|ZP_16063814.1| DNA mismatch repair protein [Acinetobacter baumannii OIFC074]
gi|421633460|ref|ZP_16074089.1| DNA mismatch repair protein [Acinetobacter baumannii Naval-13]
gi|421644377|ref|ZP_16084861.1| DNA mismatch repair protein [Acinetobacter baumannii IS-235]
gi|421645887|ref|ZP_16086342.1| DNA mismatch repair protein [Acinetobacter baumannii IS-251]
gi|421660067|ref|ZP_16100275.1| DNA mismatch repair protein [Acinetobacter baumannii Naval-83]
gi|421698847|ref|ZP_16138386.1| DNA mismatch repair protein [Acinetobacter baumannii IS-58]
gi|421796641|ref|ZP_16232698.1| DNA mismatch repair protein, C-terminal domain protein
[Acinetobacter baumannii Naval-21]
gi|421802230|ref|ZP_16238183.1| DNA mismatch repair protein, C-terminal domain protein
[Acinetobacter baumannii Canada BC1]
gi|421804496|ref|ZP_16240406.1| DNA mismatch repair protein, C-terminal domain protein
[Acinetobacter baumannii WC-A-694]
gi|169148489|emb|CAM86355.1| enzyme in methyl-directed mismatch repair, stimulates binding of
Vsr and MutS to heteroduplex DNA [Acinetobacter
baumannii AYE]
gi|213057657|gb|ACJ42559.1| DNA mismatch repair protein MutL [Acinetobacter baumannii AB0057]
gi|213988182|gb|ACJ58481.1| DNA mismatch repair protein MutL family protein [Acinetobacter
baumannii AB307-0294]
gi|332730457|gb|EGJ61773.1| DNA mismatch repair protein [Acinetobacter baumannii 6013150]
gi|395525434|gb|EJG13523.1| DNA mismatch repair protein, C-terminal domain protein
[Acinetobacter baumannii OIFC137]
gi|395563848|gb|EJG25500.1| DNA mismatch repair protein, C-terminal domain protein
[Acinetobacter baumannii OIFC109]
gi|400207077|gb|EJO38048.1| DNA mismatch repair protein MutL [Acinetobacter baumannii IS-123]
gi|400209497|gb|EJO40467.1| DNA mismatch repair protein MutL [Acinetobacter baumannii Canada
BC-5]
gi|400392498|gb|EJP59544.1| DNA mismatch repair protein MutL [Acinetobacter baumannii Naval-81]
gi|404572166|gb|EKA77211.1| DNA mismatch repair protein [Acinetobacter baumannii IS-58]
gi|408505702|gb|EKK07422.1| DNA mismatch repair protein [Acinetobacter baumannii IS-235]
gi|408517880|gb|EKK19415.1| DNA mismatch repair protein [Acinetobacter baumannii IS-251]
gi|408694048|gb|EKL39636.1| DNA mismatch repair protein [Acinetobacter baumannii OIFC074]
gi|408705990|gb|EKL51314.1| DNA mismatch repair protein [Acinetobacter baumannii Naval-13]
gi|408706460|gb|EKL51778.1| DNA mismatch repair protein [Acinetobacter baumannii Naval-83]
gi|410398474|gb|EKP50689.1| DNA mismatch repair protein, C-terminal domain protein
[Acinetobacter baumannii Naval-21]
gi|410404027|gb|EKP56100.1| DNA mismatch repair protein, C-terminal domain protein
[Acinetobacter baumannii Canada BC1]
gi|410411867|gb|EKP63736.1| DNA mismatch repair protein, C-terminal domain protein
[Acinetobacter baumannii WC-A-694]
Length = 650
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 79/372 (21%), Positives = 150/372 (40%), Gaps = 54/372 (14%)
Query: 11 FNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGN 70
+ HQ+ +L +E+ +++DVNV P K +I +++ + V+ + ++ A F
Sbjct: 288 LHGHQHSSYLLFLEVDPENIDVNVHPTKHEIRFLNQREVHEFVRHYAKETLA-QFQTASA 346
Query: 71 NMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTP 130
++ Q+M+ D + ++F +Q P+ E T
Sbjct: 347 DLAQAMKAD---------------------------DTQASF-----VQSQPKYQEQFTL 374
Query: 131 DETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRC-VENRFHANID 189
T + +D SY+ ST + + + Q YA +T + + N +
Sbjct: 375 HRTDQAVDTTLDKSSSYQPSTELLTDFNNSRPQ-AVHYAEQTPKYNGSAQLNNALKTYLA 433
Query: 190 PSK----NKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNF 245
P + N + + V K F + Q + +I+ + L I+D HA E+
Sbjct: 434 PLRDQPTNFSVDENIESVAKVDEFPLGIAIAQLHGIYILAQNTEGLIIVDMHAAHERILL 493
Query: 246 ETLQ----KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLL 301
+ ++ K SQ+L++P+ + ++++ ++D P + G E D D V++
Sbjct: 494 QQMKNAWDKPEFWTSQQLLIPKVISISRMQAIRVEDLKPQLERLGLE--IDLYGDEQVIV 551
Query: 302 TSLPMSKNTTLGREDIE----ELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRAL 357
+P L + D E ELL L + + R + A AC +V R L
Sbjct: 552 RGVP----AILQKADFENLIPELLNDLDPNDEAQGLLQKR-DELLAGMACHGAVRAHRQL 606
Query: 358 SVGEMTGLVRNM 369
S+ EM L+R M
Sbjct: 607 SLSEMNALLRQM 618
>gi|332867099|ref|ZP_08437396.1| DNA mismatch repair protein [Acinetobacter baumannii 6013113]
gi|332734292|gb|EGJ65421.1| DNA mismatch repair protein [Acinetobacter baumannii 6013113]
Length = 650
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 79/372 (21%), Positives = 150/372 (40%), Gaps = 54/372 (14%)
Query: 11 FNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGN 70
+ HQ+ +L +E+ +++DVNV P K +I +++ + V+ + ++ A F
Sbjct: 288 LHGHQHSSYLLFLEVDPENIDVNVHPTKHEIRFLNQREVHEFVRHYAKETLA-QFQTASA 346
Query: 71 NMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTP 130
++ Q+M+ D + ++F +Q P+ E T
Sbjct: 347 DLAQAMKAD---------------------------DTQASF-----VQSQPKYQEQFTL 374
Query: 131 DETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRC-VENRFHANID 189
T + +D SY+ ST + + + Q YA +T + + N +
Sbjct: 375 HRTDQAVDTTLDKSSSYQPSTELLTDFNNSRPQ-AVHYAEQTPKYNGSAQLNNALKTYLA 433
Query: 190 PSK----NKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNF 245
P + N + + V K F + Q + +I+ + L I+D HA E+
Sbjct: 434 PLRDQPTNFSVDENIESVAKVDEFPLGIAIAQLHGIYILAQNTEGLIIVDMHAAHERILL 493
Query: 246 ETLQ----KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLL 301
+ ++ K SQ+L++P+ + ++++ ++D P + G E D D V++
Sbjct: 494 QQMKNAWDKPEFWTSQQLLIPKVISISRMQAIRVEDLKPQLERLGLE--IDLYGDEQVIV 551
Query: 302 TSLPMSKNTTLGREDIE----ELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRAL 357
+P L + D E ELL L + + R + A AC +V R L
Sbjct: 552 RGVP----AILQKADFENLIPELLNDLDPNDEAQGLLQKR-DELLAGMACHGAVRAHRQL 606
Query: 358 SVGEMTGLVRNM 369
S+ EM L+R M
Sbjct: 607 SLSEMNALLRQM 618
>gi|290983030|ref|XP_002674232.1| predicted protein [Naegleria gruberi]
gi|284087821|gb|EFC41488.1| predicted protein [Naegleria gruberi]
Length = 447
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 89/199 (44%), Gaps = 25/199 (12%)
Query: 200 LNRVIKKSMFEKMKIVGQFNLGFIIVKYDSD----LFIIDQHATDEKYNFETLQKTTLIK 255
LN + K+ +++K + Q+ FI+ ++ L IDQHA DE+ E +Q+ L
Sbjct: 243 LNISLDKNQMKQLKFINQWEKKFILTSLKTENSLLLIAIDQHAADERVRMEMIQQNILDY 302
Query: 256 SQKLVVP-------QNLHLTKINQCIL-------KDNLPVFYKNGFEFSFDSSDDGNVLL 301
+Q+ P Q L+ TK+ KD L +Y N F + S + + L
Sbjct: 303 AQQSPGPWVQPLSKQTLNSTKVEGSKTISLLKQNKDKLSKWYWN-FIIIHEESTNAFLKL 361
Query: 302 TSLPM----SKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRAL 357
++P + LG E + L L+ ++ + P R+ + S+ACR ++M G L
Sbjct: 362 NTIPCLFVEKDSIELGFESMMSFLSELEFDSTCWY--PKRVLELIQSKACRGAIMFGDVL 419
Query: 358 SVGEMTGLVRNMGRIDQPW 376
S + L++ + P+
Sbjct: 420 STEKCNQLLQQLSNCQLPF 438
>gi|323342237|ref|ZP_08082469.1| DNA mismatch repair protein MutL [Erysipelothrix rhusiopathiae ATCC
19414]
gi|322463349|gb|EFY08543.1| DNA mismatch repair protein MutL [Erysipelothrix rhusiopathiae ATCC
19414]
Length = 585
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 85/186 (45%), Gaps = 27/186 (14%)
Query: 204 IKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIK---SQKLV 260
I+ E + ++ Q + +I+ + ++ L+IIDQHA E+ +E Q L + +Q +
Sbjct: 391 IESGKIEPLTVLSQMSGCYILAQGENGLYIIDQHAAMERVRYEYYQNKMLNQNNPTQDFL 450
Query: 261 VPQNLHLTK--------INQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTL 312
+P + K INQ ILK+ F+ + + +L S P+ +
Sbjct: 451 IPLIIEGRKPIIGRVHEINQ-ILKE---------FQLELEVFGEDAFVLRSTPLWIEEKV 500
Query: 313 GREDIEELLFML--QHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMG 370
E I E+L M + T E R R + A+ AC SV +S+ EMT LVR +
Sbjct: 501 VSEFIHEVLDMFEDERTIREEDLR----RNVLATLACHSSVRFNEYMSMDEMTELVRQLR 556
Query: 371 RIDQPW 376
+QP+
Sbjct: 557 ACEQPF 562
>gi|433520217|ref|ZP_20476935.1| DNA mismatch repair protein mutL [Neisseria meningitidis 65014]
gi|432253755|gb|ELL09094.1| DNA mismatch repair protein mutL [Neisseria meningitidis 65014]
Length = 658
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 96/401 (23%), Positives = 171/401 (42%), Gaps = 70/401 (17%)
Query: 1 MKLVNEVYHQ-FNNHQYPFIILNIEMSRDSVDVNVTPDKRQI-FMDHEK---LLLATVKV 55
+ V + Y +N P +L +++ ++VDVNV P K +I F D ++ L+ T+
Sbjct: 264 LHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSQQVHQLVFHTLNK 323
Query: 56 HITDSYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETI-----PVPSEDNS 110
+ D+ A ++ +S+ SN+ EV H+ P+PSE++S
Sbjct: 324 ALADTRA--------DLTESV---------------SNAGEVLHDITGVTPAPMPSENDS 360
Query: 111 -NFSHEANLQQSPETVEPDTPDETIEVIDDMPR-LQGSYRQSTPVTLSLDIIQDQLKAR- 167
N + A+ P +PDT + P Q +Y P SL + + +
Sbjct: 361 ENLFNRAS--DYPTGNKPDTRNAFGSSGKTAPMPYQSAY---APQQRSLSLRESRAAMNT 415
Query: 168 YARRTVQAQDRCVE------NRFHANIDPSKNKEAESEL---NRVIKKSMFEKMKIVGQF 218
YA + D +E RF N+ PS+ +++ + + +S +
Sbjct: 416 YAELYKKTDDIDLELSQFEQARF-GNM-PSETPAPKTDTPLSDGIPSQSELPPLGFAIAQ 473
Query: 219 NLG-FIIVKYDSDLFIIDQHATDEKYNFETL----QKTTLIKSQKLVVPQNLHLTKINQC 273
LG +I+ + + L +ID HA E+ N+E + Q+ ++SQ+L++P +
Sbjct: 474 LLGIYILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGRLQSQRLLIPITFAASHEECA 533
Query: 274 ILKDNLPVFYKNGFEFSFDSSDDGNVL-LTSLPMSKNTTLGREDI----EELLFMLQHTN 328
L D G E S GN L + ++P T LG+ D+ ++L L
Sbjct: 534 ALADYAETLAGFGLEL---SDMGGNTLAVRAVP----TMLGKADVVSLARDVLGELAQVG 586
Query: 329 STEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
S++ + A+ +C SV GR L++ EM L+R+M
Sbjct: 587 SSQTIEEHE-NHILATMSCHGSVRAGRQLTLPEMNALLRDM 626
>gi|260554622|ref|ZP_05826843.1| DNA mismatch repair ATPase [Acinetobacter baumannii ATCC 19606 =
CIP 70.34]
gi|445492540|ref|ZP_21460487.1| DNA mismatch repair protein, C-terminal domain protein
[Acinetobacter baumannii AA-014]
gi|260411164|gb|EEX04461.1| DNA mismatch repair ATPase [Acinetobacter baumannii ATCC 19606 =
CIP 70.34]
gi|444763779|gb|ELW88115.1| DNA mismatch repair protein, C-terminal domain protein
[Acinetobacter baumannii AA-014]
gi|452956018|gb|EME61412.1| DNA mismatch repair ATPase [Acinetobacter baumannii MSP4-16]
Length = 650
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 153/372 (41%), Gaps = 54/372 (14%)
Query: 11 FNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGN 70
+ HQ+ +L +E+ +++DVNV P K +I +++ + V+ + ++ A F
Sbjct: 288 LHGHQHSSYLLFLEVDPENIDVNVHPTKHEIRFLNQREVHEFVRHYAKETLA-QFQTASA 346
Query: 71 NMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETV--EPD 128
++ Q+M+ D ++ ++ + + H T Q+ +T +P+
Sbjct: 347 DLAQAMKVDDIQNLSVQPQPKYQEQFTLHRTA-----------------QAADTAVDKPN 389
Query: 129 TPDETIEVIDDM--PRLQG-SYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFH 185
+ E++ D R Q Y + TP + + LK A Q + V+
Sbjct: 390 GYQPSTELLTDFNNSRPQAVHYAEQTPKYNGSAQLNNALKTYLAPLRDQPANFSVDE--- 446
Query: 186 ANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNF 245
NI+P V K F + Q + +I+ + L I+D HA E+
Sbjct: 447 -NIEP------------VAKVDEFPLGIAIAQLHGIYILAQNTEGLIIVDMHAAHERILL 493
Query: 246 ETLQ----KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLL 301
+ ++ K SQ+L++P+ + ++++ ++D P + G E D D V++
Sbjct: 494 QQMKNAWDKPEFWTSQQLLIPKVISISRMQAVRVEDLKPQLERLGLE--IDLYGDEQVIV 551
Query: 302 TSLPMSKNTTLGREDIE----ELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRAL 357
+P L + D E ELL L + + R + A AC +V R L
Sbjct: 552 RGVP----AILQKADFENLIPELLNDLDPNDEAQGLLQKR-DELLAGMACHGAVRAHRQL 606
Query: 358 SVGEMTGLVRNM 369
S+ EM L+R M
Sbjct: 607 SLSEMNALLRQM 618
>gi|449116341|ref|ZP_21752792.1| DNA mismatch repair protein MutL [Treponema denticola H-22]
gi|448954228|gb|EMB35011.1| DNA mismatch repair protein MutL [Treponema denticola H-22]
Length = 613
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 141/337 (41%), Gaps = 57/337 (16%)
Query: 11 FNNHQYP--FIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVD 68
F N +P F+ LN++ R VD N+ P KR+ + K + ++ I+ Y D
Sbjct: 274 FPNGGFPAAFVFLNVDPER--VDFNIHPAKREAKFEDYKEIHHSLSSTISSFYKQKTVSD 331
Query: 69 GNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPD 128
+ +S + + + D EK + + ++ P +++ + Q S +T P
Sbjct: 332 --LLKESYQPEYTQGFDFEKTEY-EAADLNQSYNPAGTKNYRQSNTFDYRQNSTKTYWPS 388
Query: 129 TPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANI 188
+P + IE ++++ + Q +L A + QD
Sbjct: 389 SPIKQIET-------STAFQEISQADYGASAAQHRLSAAAYETSAVPQD----------- 430
Query: 189 DPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETL 248
+ KS F K +GQF FI V+ ++ L+IIDQHA E+ FE L
Sbjct: 431 ---------------LPKSDF---KFLGQFCGTFIAVEKNNALYIIDQHAAHERILFEGL 472
Query: 249 QKTTLIKSQKLVVPQNLHL-TKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMS 307
+K +L SQ+L++P + ++ + I++ NL K GF S G ++ ++P+
Sbjct: 473 KK-SLGPSQELLIPYRIETESEKDDEIIRLNLQELQKAGFNIS--EEKKGLWIIRAVPIR 529
Query: 308 KNTTLGREDIEELLF--------MLQHTNSTEHCRPS 336
T +D++E L ++ H + CR +
Sbjct: 530 WQGT--EKDLKEDLAGSGKDPSGLMHHILARSACRAA 564
>gi|242373589|ref|ZP_04819163.1| DNA mismatch repair protein MutL [Staphylococcus epidermidis
M23864:W1]
gi|242348952|gb|EES40554.1| DNA mismatch repair protein MutL [Staphylococcus epidermidis
M23864:W1]
Length = 656
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 161/390 (41%), Gaps = 38/390 (9%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K + E YH +YP +NI+M VDVNV P K ++ + E+ L A + I ++
Sbjct: 265 KAIIEGYHTLLTIGRYPICYINIQMDPILVDVNVHPTKLEVRLSKEEQLFALIVEKIREA 324
Query: 61 YAIGFTVDGNNMNQS------MEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSH 114
+ + N+ ++S +E +D EK R+NS S +N S
Sbjct: 325 FKDRILIPQNDFDRSPKKNKVLESFEQQKMDFEK--RNNSSASNQSASSYQSSENGYRSD 382
Query: 115 EANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQ 174
N + ++ + D + +++ Y Q T +D L
Sbjct: 383 SDNSVVNEDSGQKYEYDNSTIDVENSNSDSSHYIQRTSEDNYFQNQKDILNE-------- 434
Query: 175 AQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEK---MKIVGQFNLGFIIVKYDSDL 231
+EN + +D S K E ++ I KS + M++VGQ + +II + ++ +
Sbjct: 435 -----IENDQYNELDSSFAK--EDDIKGTISKSPHRRVPYMEVVGQVHGTYIIAQNENGM 487
Query: 232 FIIDQHATDEKYNFETLQKT---TLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFE 288
F+IDQHA E+ +E ++ + Q L++P H +K Q I+ + G
Sbjct: 488 FMIDQHAAQERIKYEYFREKIGEVTNEVQNLLIPLTFHFSKDEQMIIDQYQDELDRVGVH 547
Query: 289 FSFDSSDDGNVLLTSLPMSKNTTLGREDIEELL-FMLQHTNSTEHCRPSRIRAMFA-SRA 346
D ++ S P+ E I++++ +L+H + +IR A +
Sbjct: 548 LEHFGGHD--YIVNSYPVWFPKGDAEEIIKDMINLVLEH----KKVDVKKIREEVAIMMS 601
Query: 347 CRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
C+KS+ L EM+ L+ + + P+
Sbjct: 602 CKKSIKANHYLKNNEMSDLIDQLREAEDPF 631
>gi|304311527|ref|YP_003811125.1| DNA mismatch repair protein [gamma proteobacterium HdN1]
gi|301797260|emb|CBL45480.1| DNA mismatch repair enzyme (predicted ATPase) [gamma
proteobacterium HdN1]
Length = 646
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 83/384 (21%), Positives = 150/384 (39%), Gaps = 59/384 (15%)
Query: 4 VNEVYHQFNNH-QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYA 62
V + Y H ++P +L E+ VDVNV P K HE + +VH +
Sbjct: 272 VRQAYRDVLYHDRHPAYVLFFELDPRMVDVNVHPTK------HEVRFRESRQVHDFLYRS 325
Query: 63 IGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSP 122
+ + E P+S + + + IP + N+N H L +
Sbjct: 326 LHRAI--------AEITPASATPAAQSGMAGQAPLSASEIPFGANANANVDHSGMLLGAS 377
Query: 123 ETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVEN 182
P + +P + P+ + + QA R N
Sbjct: 378 SAAY--IPSGFVPNPSALPDQAAPQQTVLPIGIG--------------GSWQAPRRDSGN 421
Query: 183 RFHA-----NIDPSKNKEAESELNRVIKKSMFEKMKI-VGQFNLGFIIVKYDSDLFIIDQ 236
+ A + P + E+ L +++ + + Q + FI+ + + L ++D
Sbjct: 422 SYRAMAGYQALHPLPEQSPENTLTPSVREGEIPPLGFALAQLHGVFILAQNQNGLIVVDM 481
Query: 237 HATDEKYNFETLQKTTL---IKSQKLVVPQNLHLTKINQCILKDNLP-VFYKNGFEFSFD 292
HA E+ +E +++T ++SQ L+VP +++ + L D +P F + GF
Sbjct: 482 HAAHERITYERMKQTWAEDRLRSQTLLVPIGFAVSQ-READLIDEMPETFTRLGFRIERV 540
Query: 293 SSDDGNVLLTSLPM----SKNTTLGREDIEELLFMLQHTNST---EHCRPSRIRAMFASR 345
+ ++L+ +P + +L R+ + +LL H NS EH I A+ +
Sbjct: 541 GPE--SLLVRDVPALLAECRVESLVRDVLGDLLV---HGNSQRIEEH-----INALLGTM 590
Query: 346 ACRKSVMIGRALSVGEMTGLVRNM 369
AC SV R LS+ EM L+R+M
Sbjct: 591 ACHGSVRANRQLSLMEMNALLRDM 614
>gi|418075315|ref|ZP_12712557.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47502]
gi|353751329|gb|EHD31961.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47502]
Length = 649
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 154/368 (41%), Gaps = 41/368 (11%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMNQ 74
++P +++I + DVNV P K+++ + EK L+ V I +S Q
Sbjct: 280 RFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLK----------EQ 329
Query: 75 SMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPDETI 134
++ P + ++ K N E+VE +P+ ++N+ + E EP P +T
Sbjct: 330 TL--IPDALENLAKSTVRNREKVEQTILPL--KENTLYY---------EKTEPSRPSQT- 375
Query: 135 EVIDDMPRLQGSYRQSTPVTL-SLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKN 193
EV D L + T +LD + K +A R D+ H +D +
Sbjct: 376 EVADYQVELTDEGQDLTLFAKETLDRLTKPAKLHFAERKPANYDQLD----HPELDLASI 431
Query: 194 KEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL 253
+A +L R + S F +++ GQ + ++ + L+IIDQHA E+ +E +++
Sbjct: 432 DKAYDKLERE-EASSFPELEFFGQMHGTYLFAQGRDGLYIIDQHAAQERVKYEEYRESIG 490
Query: 254 ---IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNT 310
Q+L+VP + LK+ +P+ + G + + +L P+
Sbjct: 491 NVDQSQQQLLVPYIFEFPADDALRLKERMPLLEEVGVFLA--EYGENQFILREHPI---- 544
Query: 311 TLGREDIEELLF-MLQHTNSTEHCRPSRIRAMFA-SRACRKSVMIGRALSVGEMTGLVRN 368
+ E+IE ++ M T+ + RA A +C++S+ + L+
Sbjct: 545 WMAEEEIESGIYEMCDMLLLTKEVSIKKYRAELAIMMSCKRSIKANHRIDNHSARQLLYQ 604
Query: 369 MGRIDQPW 376
+ + D P+
Sbjct: 605 LSQCDNPY 612
>gi|8039787|sp|O83325.2|MUTL_TREPA RecName: Full=DNA mismatch repair protein MutL
Length = 620
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 88/200 (44%), Gaps = 23/200 (11%)
Query: 190 PSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQ 249
P+ E ++ ++ F K++GQ FI V+ ++ L++IDQHA E+ F+TLQ
Sbjct: 424 PAPAAEGDAPVHNHTHTGAF---KVLGQVAGTFIAVERNNALYLIDQHAAHERIIFDTLQ 480
Query: 250 KTTLIKSQKLVVPQNLHLTKINQC-ILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSK 308
+ L +Q L++P ++H + I+ GF F DG+ +T++P+
Sbjct: 481 R-NLGTAQILLIPYHIHPRSDEEARIMHRACTELSPAGFR--FHEEPDGSWHVTAVPLHW 537
Query: 309 NTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRN 368
R E+L + ++ H +R + A+ ACR + G L + LV
Sbjct: 538 -----RGSEEQLAHDILYSGKNAH---DILRHVLATCACRSACKDGTILDDATLHSLVEQ 589
Query: 369 MGRIDQP--------WVSMG 380
+ Q W+ +G
Sbjct: 590 AFALPQSRCPHGRPIWIVIG 609
>gi|449108895|ref|ZP_21745536.1| DNA mismatch repair protein MutL [Treponema denticola ATCC 33520]
gi|448961170|gb|EMB41878.1| DNA mismatch repair protein MutL [Treponema denticola ATCC 33520]
Length = 598
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 143/337 (42%), Gaps = 72/337 (21%)
Query: 11 FNNHQYP--FIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVD 68
F N +P F+ LNI+ R VD N+ P KR+ + K + ++ I+ Y D
Sbjct: 274 FPNGGFPAAFVFLNIDPER--VDFNIHPAKREAKFEDYKEIHHSLSSTISSFYKQKTVSD 331
Query: 69 GNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPD 128
+ +S + + + D EK E+E A+L QS
Sbjct: 332 --LLKESYQPEYTRGFDFEK--------TEYEA--------------ADLNQS------Y 361
Query: 129 TPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANI 188
P T + + + +Y S+P+ QL+A A + V A + H
Sbjct: 362 NPAGTKNYLQNSTK---TYWPSSPI--------KQLEASAAFQEVSAAQHRLSAAAHET- 409
Query: 189 DPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETL 248
S + + + KS F K +GQF FI V+ ++ L+IIDQHA E+ FE L
Sbjct: 410 ---------SAVPQDLPKSDF---KFLGQFCGTFIAVEKNNALYIIDQHAAHERILFEGL 457
Query: 249 QKTTLIKSQKLVVPQNLHL-TKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMS 307
+K +L SQ+L++P + ++ + I++ NL K GF S D G ++ ++P+
Sbjct: 458 KK-SLGPSQELLIPYRIETESEKDDEIIRLNLHELQKAGFNISEDKK--GLWIIKAVPIR 514
Query: 308 KNTTLGREDIEELLF--------MLQHTNSTEHCRPS 336
T +D++E L ++ H + CR +
Sbjct: 515 WQGT--EKDLKEDLAGAGKDPSGLMHHILARSACRAA 549
>gi|449019622|dbj|BAM83024.1| similar to DNA mismatch repair protein [Cyanidioschyzon merolae
strain 10D]
Length = 658
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 97/221 (43%), Gaps = 39/221 (17%)
Query: 186 ANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNF 245
A +DP+ + A + E +VGQF+ FI+ + S++F++DQHA DE+ F
Sbjct: 426 ARVDPTAARTAVQ-----LHARELEDAVVVGQFDAKFIVFRVRSEIFLLDQHAADERARF 480
Query: 246 ETLQK------------TTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDS 293
E L + T L +S L VP + L ++C+ G+ + S
Sbjct: 481 EQLTQMYQESLDPRKYPTALNRSVSLRVPLLVDLG--SRCLSATTCAFLRHFGWSWDEAS 538
Query: 294 SD---DGNVLLTSLPMSKN----------TTLGRE------DIEELLFMLQHTNSTEHCR 334
S+ D ++ T++ +++ + LG++ D+ E + ++ T+
Sbjct: 539 SEKPIDTHIASTAIAGTEHRSTLRVRSVPSVLGQQPLLQASDLLECIDLMLETDHAVSMV 598
Query: 335 PSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQP 375
P+ R + + ACR ++M G L + L++ + + P
Sbjct: 599 PAAQRVL-ETLACRHAIMFGDRLDLAACQQLLKRLSKCRLP 638
>gi|421654171|ref|ZP_16094502.1| DNA mismatch repair protein [Acinetobacter baumannii Naval-72]
gi|421664034|ref|ZP_16104174.1| DNA mismatch repair protein [Acinetobacter baumannii OIFC110]
gi|421695195|ref|ZP_16134809.1| DNA mismatch repair protein [Acinetobacter baumannii WC-692]
gi|421786825|ref|ZP_16223209.1| DNA mismatch repair protein, C-terminal domain protein
[Acinetobacter baumannii Naval-82]
gi|404566763|gb|EKA71905.1| DNA mismatch repair protein [Acinetobacter baumannii WC-692]
gi|408512021|gb|EKK13668.1| DNA mismatch repair protein [Acinetobacter baumannii Naval-72]
gi|408712331|gb|EKL57514.1| DNA mismatch repair protein [Acinetobacter baumannii OIFC110]
gi|410410617|gb|EKP62517.1| DNA mismatch repair protein, C-terminal domain protein
[Acinetobacter baumannii Naval-82]
Length = 650
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 153/372 (41%), Gaps = 54/372 (14%)
Query: 11 FNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGN 70
+ HQ+ +L +E+ +++DVNV P K +I +++ + V+ + ++ A F
Sbjct: 288 LHGHQHSSYLLFLEVDPENIDVNVHPTKHEIRFLNQREVHEFVRHYAKETLA-QFQTASA 346
Query: 71 NMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETV--EPD 128
++ Q+M+ D ++ ++ + + H T Q+ +T +P+
Sbjct: 347 DLAQAMKVDDIQNLSVQPQPKYQEQFTLHRTA-----------------QAADTAVDKPN 389
Query: 129 TPDETIEVIDDM--PRLQG-SYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFH 185
+ E++ D R Q Y + TP + + LK A Q + V+
Sbjct: 390 GYQPSTELLTDFNNSRPQAVHYAEQTPKYNGSAQLNNALKTYLAPLRDQPTNFSVDE--- 446
Query: 186 ANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNF 245
NI+P V K F + Q + +I+ + L I+D HA E+
Sbjct: 447 -NIEP------------VAKVDEFPLGIAIAQLHGIYILAQNTEGLIIVDMHAAHERILL 493
Query: 246 ETLQ----KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLL 301
+ ++ K SQ+L++P+ + ++++ ++D P + G E D D V++
Sbjct: 494 QQMKNAWDKPEFWTSQQLLIPKVISISRMQAVRVEDLKPQLERLGLE--IDLYGDEQVIV 551
Query: 302 TSLPMSKNTTLGREDIE----ELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRAL 357
+P L + D E ELL L + + R + A AC +V R L
Sbjct: 552 RGVP----AILQKADFENLIPELLNDLDPNDEAQGLLQKR-DELLAGMACHGAVRAHRQL 606
Query: 358 SVGEMTGLVRNM 369
S+ EM L+R M
Sbjct: 607 SLSEMNALLRQM 618
>gi|53804020|ref|YP_114135.1| DNA mismatch repair protein [Methylococcus capsulatus str. Bath]
gi|53757781|gb|AAU92072.1| DNA mismatch repair protein MutL [Methylococcus capsulatus str.
Bath]
Length = 611
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 76/155 (49%), Gaps = 14/155 (9%)
Query: 222 FIIVKYDSDLFIIDQHATDEKYNFETLQK---TTLIKSQKLVVPQNLHLTKINQCILKDN 278
+I+ + L ++D HA E+ +E +++ I SQ L++P + L++ + + ++
Sbjct: 432 YILAENAQGLILVDGHAAHERITYERMKRQYQAGGIASQPLLLPVRIRLSRADADLAEEY 491
Query: 279 LPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEEL----LFMLQHTNSTEHCR 334
+ G E + +G+VL+ S+P L D+E L L L+ S+ +
Sbjct: 492 GEHLARLGIELR--RTGEGSVLVRSVP----ALLEGSDVERLVRDTLADLREHGSSGRLQ 545
Query: 335 PSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
+ + + AS AC SV GR L+V EM L+R M
Sbjct: 546 ET-LNTVLASMACHGSVRAGRKLTVPEMNALLREM 579
>gi|303259226|ref|ZP_07345204.1| DNA mismatch repair protein [Streptococcus pneumoniae SP-BS293]
gi|303260982|ref|ZP_07346931.1| DNA mismatch repair protein [Streptococcus pneumoniae SP14-BS292]
gi|303263309|ref|ZP_07349232.1| DNA mismatch repair protein [Streptococcus pneumoniae BS397]
gi|303265474|ref|ZP_07351374.1| DNA mismatch repair protein [Streptococcus pneumoniae BS457]
gi|303267968|ref|ZP_07353770.1| DNA mismatch repair protein [Streptococcus pneumoniae BS458]
gi|418138527|ref|ZP_12775359.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA13338]
gi|418179562|ref|ZP_12816137.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA41688]
gi|421295458|ref|ZP_15746173.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA58581]
gi|302637819|gb|EFL68305.1| DNA mismatch repair protein [Streptococcus pneumoniae SP14-BS292]
gi|302639644|gb|EFL70101.1| DNA mismatch repair protein [Streptococcus pneumoniae SP-BS293]
gi|302642664|gb|EFL73009.1| DNA mismatch repair protein [Streptococcus pneumoniae BS458]
gi|302644914|gb|EFL75161.1| DNA mismatch repair protein [Streptococcus pneumoniae BS457]
gi|302647082|gb|EFL77306.1| DNA mismatch repair protein [Streptococcus pneumoniae BS397]
gi|353846984|gb|EHE27011.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA41688]
gi|353906234|gb|EHE81638.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA13338]
gi|395897527|gb|EJH08486.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA58581]
Length = 649
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 155/368 (42%), Gaps = 41/368 (11%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMNQ 74
++P +++I + DVNV P K+++ + EK L+A V I++S Q
Sbjct: 280 RFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMALVSEAISNSLK----------EQ 329
Query: 75 SMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPDETI 134
++ P + ++ K N E+VE +P+ ++N+ + E EP P +
Sbjct: 330 TL--IPDALENLAKSTVRNREKVEQTILPL--KENTLYY---------EKTEPTRPSQA- 375
Query: 135 EVIDDMPRLQGSYRQSTPVTL-SLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKN 193
EV D L + T +LD + K +A R D+ H +D +
Sbjct: 376 EVADYQVELTEERQDLTLFAKETLDQLTKPAKLHFAERKPANYDQLD----HPELDLASL 431
Query: 194 KEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL 253
+A +L R + S F +++ GQ + ++ + L+IIDQHA E+ +E +++
Sbjct: 432 DKAYDKLERE-ESSSFPELEFFGQMHGTYLFAQGRDGLYIIDQHAAQERVKYEEYRESIG 490
Query: 254 ---IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNT 310
Q+L+VP + LK+ +P+ + G + + +L P+
Sbjct: 491 DVDQSQQQLLVPYIFEFPADDALRLKERMPLLEEVGVFLA--EYGENQFILREHPI---- 544
Query: 311 TLGREDIEELLF-MLQHTNSTEHCRPSRIRAMFA-SRACRKSVMIGRALSVGEMTGLVRN 368
+ E+IE ++ M T+ + RA A +C++S+ + L+
Sbjct: 545 WMAEEEIESGIYEMCDMLLLTKEVSIKKYRAELAIMMSCKRSIKANHRIDDHSARQLLYQ 604
Query: 369 MGRIDQPW 376
+ + D P+
Sbjct: 605 LSQCDNPY 612
>gi|418087979|ref|ZP_12725144.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47033]
gi|418201491|ref|ZP_12837923.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA52306]
gi|419454599|ref|ZP_13994562.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
EU-NP04]
gi|421284758|ref|ZP_15735536.1| DNA mismatch repair protein mutL 3 [Streptococcus pneumoniae
GA60190]
gi|133950292|gb|ABO44018.1| MutL [Streptococcus pneumoniae]
gi|353755656|gb|EHD36259.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47033]
gi|353868967|gb|EHE48850.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA52306]
gi|379631040|gb|EHZ95620.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
EU-NP04]
gi|395888678|gb|EJG99689.1| DNA mismatch repair protein mutL 3 [Streptococcus pneumoniae
GA60190]
Length = 649
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 154/368 (41%), Gaps = 41/368 (11%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMNQ 74
++P +++I + DVNV P K+++ + EK L+ V I +S Q
Sbjct: 280 RFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLK----------EQ 329
Query: 75 SMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPDETI 134
++ P + ++ K N E+VE +P+ ++N+ + E EP P +T
Sbjct: 330 TL--IPDALENLAKSTVRNREKVEQTILPL--KENTLYY---------EKTEPSRPSQT- 375
Query: 135 EVIDDMPRLQGSYRQSTPVTL-SLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKN 193
EV D L + T +LD + K +A R D+ H +D +
Sbjct: 376 EVADYQVELTDEGQDLTLFAKETLDRLTKPAKLHFAERKPANYDQLD----HPELDLASI 431
Query: 194 KEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL 253
+A +L R + S F +++ GQ + ++ + L+IIDQHA E+ +E +++
Sbjct: 432 DKAYDKLERE-EASSFPELEFFGQMHGTYLFAQGRDGLYIIDQHAAQERVKYEEYRESIG 490
Query: 254 ---IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNT 310
Q+L+VP + LK+ +P+ + G + + +L P+
Sbjct: 491 NVDQSQQQLLVPYIFEFPADDALRLKERMPLLEEVGVFLA--EYGENQFILREHPI---- 544
Query: 311 TLGREDIEELLF-MLQHTNSTEHCRPSRIRAMFA-SRACRKSVMIGRALSVGEMTGLVRN 368
+ E+IE ++ M T+ + RA A +C++S+ + L+
Sbjct: 545 WMAEEEIESGIYEMCDMLLLTKEVSIKKYRAELAIMMSCKRSIKANHRIDDHSARQLLYQ 604
Query: 369 MGRIDQPW 376
+ + D P+
Sbjct: 605 LSQCDNPY 612
>gi|308181083|ref|YP_003925211.1| DNA mismatch repair protein [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|380033020|ref|YP_004890011.1| DNA mismatch repair protein MutL/HexB [Lactobacillus plantarum
WCFS1]
gi|38258030|sp|Q88UZ8.1|MUTL_LACPL RecName: Full=DNA mismatch repair protein MutL
gi|308046574|gb|ADN99117.1| DNA mismatch repair protein [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|342242263|emb|CCC79497.1| DNA mismatch repair protein MutL/HexB [Lactobacillus plantarum
WCFS1]
Length = 678
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 122/296 (41%), Gaps = 31/296 (10%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYA------IGFTVD 68
+YP ++ + M VDVNV P K+++ + E L V ITD T
Sbjct: 278 RYPIAVIALTMDPLLVDVNVHPTKQEVRLSKEPELAKLVSTTITDRLVDVNLIPSALTNL 337
Query: 69 GNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPD 128
G++ + + D + M+ S+ +V +T P +E + A +Q S T
Sbjct: 338 GSHRREHLNTD---QLAMDLNAVSSQYQVADKTTPASTEQFAASLAAATMQPSSATTMVS 394
Query: 129 TPDETIEVIDD------MPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVEN 182
T ++ +P + + P+ +S +D+L A VQA D+ ++
Sbjct: 395 TTSAQPSAVNRAAVSAVVPSESAASSANQPIMISH---RDELTAT----PVQAFDQRYQS 447
Query: 183 R-----FHANIDPSKNKEAESE-LNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQ 236
F +P + A S + F +++ +GQ + +++ + D ++I+DQ
Sbjct: 448 ESGALPFGETAEPLETSTAASAPTSEAPDTERFPQLRYLGQMHGTYLLAEADDGMYILDQ 507
Query: 237 HATDEKYNFETLQKT---TLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEF 289
HA E+ N+E ++ Q L+VP L + +K+ LP+ + G
Sbjct: 508 HAAQERINYEYYRQAIGEVSADQQNLLVPIILDYPTSDVLKIKEKLPLLAELGIHL 563
>gi|307126400|ref|YP_003878431.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae 670-6B]
gi|418111522|ref|ZP_12748527.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA41538]
gi|418131589|ref|ZP_12768466.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA11304]
gi|418154231|ref|ZP_12790962.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA16242]
gi|418224634|ref|ZP_12851264.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
NP112]
gi|419465827|ref|ZP_14005713.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA05248]
gi|419476838|ref|ZP_14016664.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA18068]
gi|419511633|ref|ZP_14051267.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA05578]
gi|419515903|ref|ZP_14055521.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA02506]
gi|421282420|ref|ZP_15733210.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA04216]
gi|133950174|gb|ABO44014.1| MutL [Streptococcus pneumoniae]
gi|183393274|gb|ACC61797.1| DNA mismatch repair protein [Streptococcus pneumoniae]
gi|306483462|gb|ADM90331.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae 670-6B]
gi|353786579|gb|EHD66990.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA41538]
gi|353809057|gb|EHD89319.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA11304]
gi|353822523|gb|EHE02698.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA16242]
gi|353883278|gb|EHE63086.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
NP112]
gi|379547399|gb|EHZ12536.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA05248]
gi|379567637|gb|EHZ32620.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA18068]
gi|379636103|gb|EIA00661.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA05578]
gi|379639906|gb|EIA04445.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA02506]
gi|395884390|gb|EJG95428.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA04216]
Length = 649
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 154/368 (41%), Gaps = 41/368 (11%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMNQ 74
++P +++I + DVNV P K+++ + EK L+ V I +S Q
Sbjct: 280 RFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLK----------EQ 329
Query: 75 SMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPDETI 134
++ P + ++ K N E+VE +P+ ++N+ + E EP P +T
Sbjct: 330 TL--IPDALENLAKSTVRNREKVEQTILPL--KENTLYY---------EKTEPSRPSQT- 375
Query: 135 EVIDDMPRLQGSYRQSTPVTL-SLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKN 193
EV D L + T +LD + K +A R D+ H +D +
Sbjct: 376 EVADYQVELTDEGQDLTLFAKETLDRLTKPAKLHFAERKPANYDQLD----HPELDLASI 431
Query: 194 KEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL 253
+A +L R + S F +++ GQ + ++ + L+IIDQHA E+ +E +++
Sbjct: 432 DKAYDKLERE-EASSFPELEFFGQMHGTYLFAQGRDGLYIIDQHAAQERVKYEEYRESIG 490
Query: 254 ---IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNT 310
Q+L+VP + LK+ +P+ + G + + +L P+
Sbjct: 491 NVDQSQQQLLVPYIFEFPADDALRLKERMPLLEEVGVFLA--EYGENQFILREHPI---- 544
Query: 311 TLGREDIEELLF-MLQHTNSTEHCRPSRIRAMFA-SRACRKSVMIGRALSVGEMTGLVRN 368
+ E+IE ++ M T+ + RA A +C++S+ + L+
Sbjct: 545 WMAEEEIESGIYEMCDMLLLTKEVSIKKYRAELAIMMSCKRSIKANHRIDDHSARQLLYQ 604
Query: 369 MGRIDQPW 376
+ + D P+
Sbjct: 605 LSQCDNPY 612
>gi|448821799|ref|YP_007414961.1| DNA mismatch repair protein MutL [Lactobacillus plantarum ZJ316]
gi|448275296|gb|AGE39815.1| DNA mismatch repair protein MutL [Lactobacillus plantarum ZJ316]
Length = 680
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 122/296 (41%), Gaps = 31/296 (10%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYA------IGFTVD 68
+YP ++ + M VDVNV P K+++ + E L V ITD T
Sbjct: 280 RYPIAVIALTMDPLLVDVNVHPTKQEVRLSKEPELAKLVSTTITDRLVDVNLIPSALTNL 339
Query: 69 GNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPD 128
G++ + + D + M+ S+ +V +T P +E + A +Q S T
Sbjct: 340 GSHRREHLNTD---QLAMDLNAVSSQYQVADKTTPASTEQFAASLAAATMQPSSATTMVS 396
Query: 129 TPDETIEVIDD------MPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVEN 182
T ++ +P + + P+ +S +D+L A VQA D+ ++
Sbjct: 397 TTSAQPSAVNRAAVSAVVPSESAASSANPPIMISH---RDELTAT----PVQAFDQRYQS 449
Query: 183 R-----FHANIDPSKNKEAESE-LNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQ 236
F +P + A S + F +++ +GQ + +++ + D ++I+DQ
Sbjct: 450 ESGALPFGETAEPLETSTAASAPTSEAPDTERFPQLRYLGQMHGTYLLAEADDGMYILDQ 509
Query: 237 HATDEKYNFETLQKT---TLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEF 289
HA E+ N+E ++ Q L+VP L + +K+ LP+ + G
Sbjct: 510 HAAQERINYEYYRQAIGEVSADQQNLLVPIILDYPTSDVLKIKEKLPLLAELGIHL 565
>gi|421267412|ref|ZP_15718287.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
SPAR95]
gi|395872501|gb|EJG83599.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
SPAR95]
Length = 649
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 154/368 (41%), Gaps = 41/368 (11%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMNQ 74
++P +++I + DVNV P K+++ + EK L+ V I +S Q
Sbjct: 280 RFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLK----------EQ 329
Query: 75 SMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPDETI 134
++ P + ++ K N E+VE +P+ ++N+ + E EP P +T
Sbjct: 330 TL--IPDALENLAKSTVRNREKVEQTILPL--KENTLYY---------EKTEPSRPSQT- 375
Query: 135 EVIDDMPRLQGSYRQSTPVTL-SLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKN 193
EV D L + T +LD + K +A R D+ H +D +
Sbjct: 376 EVADYQVELTDEGQDLTLFAKETLDRLTKPAKLHFAERKPANYDQLD----HPELDLASI 431
Query: 194 KEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL 253
+A +L R + S F +++ GQ + ++ + L+IIDQHA E+ +E +++
Sbjct: 432 DKAYDKLERE-EASSFPELEFFGQMHGTYLFAQGRDGLYIIDQHAAQERVKYEEYRESIG 490
Query: 254 ---IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNT 310
Q+L+VP + LK+ +P+ + G + + +L P+
Sbjct: 491 NVDQSQQQLLVPYIFEFPADDALRLKERMPLLEEVGVFLA--EYGENQFILREHPI---- 544
Query: 311 TLGREDIEELLF-MLQHTNSTEHCRPSRIRAMFA-SRACRKSVMIGRALSVGEMTGLVRN 368
+ E+IE ++ M T+ + RA A +C++S+ + L+
Sbjct: 545 WMAEEEIESGIYEMCDMLLLTKEVSIKKYRAELAIMMSCKRSIKANHRIDDHSARQLLYQ 604
Query: 369 MGRIDQPW 376
+ + D P+
Sbjct: 605 LSQCDNPY 612
>gi|418172585|ref|ZP_12809199.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA41277]
gi|353839284|gb|EHE19358.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA41277]
Length = 649
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 154/368 (41%), Gaps = 41/368 (11%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMNQ 74
++P +++I + DVNV P K+++ + EK L+ V I +S Q
Sbjct: 280 RFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLK----------EQ 329
Query: 75 SMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPDETI 134
++ P + ++ K N E+VE +P+ ++N+ + E EP P +T
Sbjct: 330 TL--IPDALENLAKSTVRNREKVEQTILPL--KENTLYY---------EKTEPSRPSQT- 375
Query: 135 EVIDDMPRLQGSYRQSTPVTL-SLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKN 193
EV D L + T +LD + K +A R D+ H +D +
Sbjct: 376 EVADYQVELTDEGQDLTLFAKETLDRLTKPAKLHFAERKPANYDQLD----HPELDLASI 431
Query: 194 KEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL 253
+A +L R + S F +++ GQ + ++ + L+IIDQHA E+ +E +++
Sbjct: 432 DKAYDKLERE-EASSFPELEFFGQMHGTYLFAQGRDGLYIIDQHAAQERVKYEEYRESIG 490
Query: 254 ---IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNT 310
Q+L+VP + LK+ +P+ + G + + +L P+
Sbjct: 491 NVDQSQQQLLVPYIFEFPADDALRLKERMPLLEEVGVFLA--EYGENQFILREHPI---- 544
Query: 311 TLGREDIEELLF-MLQHTNSTEHCRPSRIRAMFA-SRACRKSVMIGRALSVGEMTGLVRN 368
+ E+IE ++ M T+ + RA A +C++S+ + L+
Sbjct: 545 WMAEEEIESGIYEMCDMLLLTKEVSIKKYRAELAIMMSCKRSIKANHRIDDHSARQLLYQ 604
Query: 369 MGRIDQPW 376
+ + D P+
Sbjct: 605 LSQCDNPY 612
>gi|300769727|ref|ZP_07079610.1| DNA mismatch repair protein MutL [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|300492770|gb|EFK27955.1| DNA mismatch repair protein MutL [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
Length = 680
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 122/296 (41%), Gaps = 31/296 (10%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYA------IGFTVD 68
+YP ++ + M VDVNV P K+++ + E L V ITD T
Sbjct: 280 RYPIAVIALTMDPLLVDVNVHPTKQEVRLSKEPELAKLVSTTITDRLVDVNLIPSALTNL 339
Query: 69 GNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPD 128
G++ + + D + M+ S+ +V +T P +E + A +Q S T
Sbjct: 340 GSHRREHLNTD---QLAMDLNAVSSQYQVADKTTPASTEQFAASLAAATMQPSSATTMVS 396
Query: 129 TPDETIEVIDD------MPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVEN 182
T ++ +P + + P+ +S +D+L A VQA D+ ++
Sbjct: 397 TTSAQPSAVNRAAVSAVVPSESAASSANPPIMISH---RDELTAT----PVQAFDQRYQS 449
Query: 183 R-----FHANIDPSKNKEAESE-LNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQ 236
F +P + A S + F +++ +GQ + +++ + D ++I+DQ
Sbjct: 450 ESGALPFGETAEPLETSTAASAPTSEAPDTERFPQLRYLGQMHGTYLLAEADDGMYILDQ 509
Query: 237 HATDEKYNFETLQKT---TLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEF 289
HA E+ N+E ++ Q L+VP L + +K+ LP+ + G
Sbjct: 510 HAAQERINYEYYRQAIGEVSADQQNLLVPIILDYPTSDVLKIKEKLPLLAELGIHL 565
>gi|449943287|ref|ZP_21806345.1| DNA mismatch repair protein [Streptococcus mutans 11A1]
gi|449149450|gb|EMB53252.1| DNA mismatch repair protein [Streptococcus mutans 11A1]
Length = 651
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 108/238 (45%), Gaps = 38/238 (15%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMNQ 74
++P +++I++ DVNV P K+++ + EK L+ + I DS +
Sbjct: 280 RFPIAVIDIQLDPYLADVNVHPTKQEVRISKEKELMNLISSAIADSL------------R 327
Query: 75 SMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPDETI 134
E P + ++ K + ++ E +P+ + N + N ET + E
Sbjct: 328 EQELIPDALENLAKTSTNKKQKFEQTQLPL-KQSNLYYDKTQNDFFLKETTVSEASSE-F 385
Query: 135 EVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKNK 194
V+D ++ +T D + +YA+R Q R EN+ H ++ + NK
Sbjct: 386 TVVD----------KAVNIT---DNVSGHSSVKYAQR----QMRTCENKEHPSLTMT-NK 427
Query: 195 EAESELNRVIK------KSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFE 246
+ + +L+R+++ KS F +++ GQ + ++ + + L+IIDQHA E+ +E
Sbjct: 428 QQKRQLSRIVESLENEEKSTFPELEYFGQMHGTYLFAQGEGGLYIIDQHAAQERVKYE 485
>gi|418275814|ref|ZP_12891137.1| DNA mismatch repair protein MutL/HexB [Lactobacillus plantarum
subsp. plantarum NC8]
gi|376009365|gb|EHS82694.1| DNA mismatch repair protein MutL/HexB [Lactobacillus plantarum
subsp. plantarum NC8]
Length = 678
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 122/296 (41%), Gaps = 31/296 (10%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYA------IGFTVD 68
+YP ++ + M VDVNV P K+++ + E L V ITD T
Sbjct: 278 RYPIAVIALTMDPLLVDVNVHPTKQEVRLSKEPELAKLVSTTITDRLVDVNLIPSALTNL 337
Query: 69 GNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPD 128
G++ + + D + M+ S+ +V +T P +E + A +Q S T
Sbjct: 338 GSHRREHLNTD---QLAMDLNAVSSQYQVADKTTPASTEQFAASLAAATMQPSSATTMVS 394
Query: 129 TPDETIEVIDD------MPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVEN 182
T ++ +P + + P+ +S +D+L A VQA D+ ++
Sbjct: 395 TTSAQPSAVNRAAVSAVVPSESAASSANPPIMISH---RDELTAT----PVQAFDQRYQS 447
Query: 183 R-----FHANIDPSKNKEAESE-LNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQ 236
F +P + A S + F +++ +GQ + +++ + D ++I+DQ
Sbjct: 448 ESGALPFGETAEPLETSTAASAPTSEAPDTERFPQLRYLGQMHGTYLLAEADDGMYILDQ 507
Query: 237 HATDEKYNFETLQKT---TLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEF 289
HA E+ N+E ++ Q L+VP L + +K+ LP+ + G
Sbjct: 508 HAAQERINYEYYRQAIGEVSADQQNLLVPIILDYPTSDVLKIKEKLPLLAELGIHL 563
>gi|153657|gb|AAA88600.1| mismatch repair protein [Streptococcus pneumoniae]
Length = 649
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 154/368 (41%), Gaps = 41/368 (11%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMNQ 74
++P +++I + DVNV P K+++ + EK L+ V I +S Q
Sbjct: 280 RFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLK----------EQ 329
Query: 75 SMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPDETI 134
++ P + ++ K N E+VE +P+ ++N+ + E EP P +T
Sbjct: 330 TL--IPDALENLAKSTVRNREKVEQTILPL--KENTLYY---------EKTEPSRPSQT- 375
Query: 135 EVIDDMPRLQGSYRQSTPVTL-SLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKN 193
EV D L + T +LD + K +A R D+ H +D +
Sbjct: 376 EVADYQVELTDEGQDLTLFAKETLDRLTKPAKLHFAERKPANYDQLD----HPELDLASI 431
Query: 194 KEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL 253
+A +L R + S F +++ GQ + ++ + L+IIDQHA E+ +E +++
Sbjct: 432 DKAYDKLERE-EASSFPELEFFGQMHGTYLFAQGRDGLYIIDQHAAQERVKYEEYRESIG 490
Query: 254 ---IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNT 310
Q+L+VP + LK+ +P+ + G + + +L P+
Sbjct: 491 NVDQSQQQLLVPYIFEFPADDALRLKERMPLLEEVGVFLA--EYGENQFILREHPI---- 544
Query: 311 TLGREDIEELLF-MLQHTNSTEHCRPSRIRAMFA-SRACRKSVMIGRALSVGEMTGLVRN 368
+ E+IE ++ M T+ + RA A +C++S+ + L+
Sbjct: 545 WMAEEEIESGIYEMCDMLLLTKEVSIKKYRAELAIMMSCKRSIKANHRIDDHSARQLLYQ 604
Query: 369 MGRIDQPW 376
+ + D P+
Sbjct: 605 LSQCDNPY 612
>gi|336065264|ref|YP_004560122.1| DNA mismatch repair protein [Erysipelothrix rhusiopathiae str.
Fujisawa]
gi|334295210|dbj|BAK31081.1| DNA mismatch repair protein [Erysipelothrix rhusiopathiae str.
Fujisawa]
Length = 585
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 90/198 (45%), Gaps = 31/198 (15%)
Query: 192 KNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKT 251
K +E E + I+ E + ++ Q + +I+ + ++ L+IIDQHA E+ +E Q
Sbjct: 383 KPREVEPQ----IESEKIEPLTVLSQMSGCYILAQGENGLYIIDQHAAMERVRYEYYQNK 438
Query: 252 TLIK---SQKLVVPQNLHLTK--------INQCILKDNLPVFYKNGFEFSFDSSDDGNVL 300
L + +Q ++P + K INQ ILK+ F+ + + +
Sbjct: 439 MLNQNNPTQDFLIPLIIEGRKPIIGRVHEINQ-ILKE---------FQLELEVFGEDAFV 488
Query: 301 LTSLPMSKNTTLGREDIEELLFML--QHTNSTEHCRPSRIRAMFASRACRKSVMIGRALS 358
L S P+ + E I E+L M + T E R R + A+ AC SV +S
Sbjct: 489 LRSTPLWIEEKVVSEFIHEVLDMFEDERTIREEDLR----RNVLATLACHSSVRFNEYMS 544
Query: 359 VGEMTGLVRNMGRIDQPW 376
+ EMT LVR + +QP+
Sbjct: 545 MDEMTELVRQLRACEQPF 562
>gi|268684372|ref|ZP_06151234.1| DNA mismatch repair protein [Neisseria gonorrhoeae SK-92-679]
gi|268624656|gb|EEZ57056.1| DNA mismatch repair protein [Neisseria gonorrhoeae SK-92-679]
Length = 658
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 93/396 (23%), Positives = 159/396 (40%), Gaps = 60/396 (15%)
Query: 1 MKLVNEVYHQ-FNNHQYPFIILNIEMSRDSVDVNVTPDKRQI-FMDH---EKLLLATVKV 55
+ V + Y +N P +L +E+ ++VDVNV P K +I F D +L+ T+
Sbjct: 264 LHAVKQAYRDVLHNALTPAFVLFLELPPEAVDVNVHPTKTEIRFRDSRQVHQLVFHTLNK 323
Query: 56 HITDSYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETI-----PVPSE-DN 109
+ D+ A N+ +S+ SN+ EV H+ P+PSE D
Sbjct: 324 ALADTRA--------NLTESV---------------SNAGEVLHDITGVTPAPMPSENDG 360
Query: 110 SNFSHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYA 169
N A+ P +PD + P + R +LSL + + YA
Sbjct: 361 ENLFDSAS--NHPTGNKPDIRNAFGSSGKTAPMPYQAARAPQQHSLSLRESRAAMDT-YA 417
Query: 170 RRTVQAQDRCVE------NRFHANIDPSKNKEAESELNRVI-KKSMFEKMKIVGQFNLG- 221
+ D +E RF + + ++ L+ I +S + LG
Sbjct: 418 ELYKKTDDIDLELSQFEQARFGNMPSETPAHKTDTPLSDGIPSQSELPPLGFAIAQLLGI 477
Query: 222 FIIVKYDSDLFIIDQHATDEKYNFETL----QKTTLIKSQKLVVPQNLHLTKINQCILKD 277
+I+ + + L +ID HA E+ N+E + Q+ ++SQ L++P + L D
Sbjct: 478 YILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGNLQSQHLLIPVTFAASHEECAALAD 537
Query: 278 NLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDI----EELLFMLQHTNSTEHC 333
+ G E S GN L + LG+ D+ ++L L S++
Sbjct: 538 HAETLAGFGLEL---SDMGGNTLAVR---AAPVMLGKSDVVSLARDVLGELAQVGSSQTI 591
Query: 334 RPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
R + A+ +C S+ GR L++ EM L+R+M
Sbjct: 592 ASHENR-ILATMSCHGSIRAGRRLTLPEMNALLRDM 626
>gi|15900110|ref|NP_344714.1| DNA mismatch repair protein [Streptococcus pneumoniae TIGR4]
gi|15902204|ref|NP_357754.1| DNA mismatch repair protein [Streptococcus pneumoniae R6]
gi|111657934|ref|ZP_01408643.1| hypothetical protein SpneT_02000883 [Streptococcus pneumoniae
TIGR4]
gi|116516396|ref|YP_815684.1| DNA mismatch repair protein [Streptococcus pneumoniae D39]
gi|148983575|ref|ZP_01816894.1| DNA mismatch repair protein HexB [Streptococcus pneumoniae
SP3-BS71]
gi|148987911|ref|ZP_01819374.1| DNA mismatch repair protein HexB [Streptococcus pneumoniae
SP6-BS73]
gi|148992754|ref|ZP_01822397.1| DNA mismatch repair protein HexB [Streptococcus pneumoniae
SP9-BS68]
gi|148996599|ref|ZP_01824317.1| DNA mismatch repair protein HexB [Streptococcus pneumoniae
SP11-BS70]
gi|149017847|ref|ZP_01834306.1| DNA mismatch repair protein HexB [Streptococcus pneumoniae
SP23-BS72]
gi|168483814|ref|ZP_02708766.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae
CDC1873-00]
gi|168490361|ref|ZP_02714560.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae SP195]
gi|168576395|ref|ZP_02722278.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae MLV-016]
gi|182683158|ref|YP_001834905.1| DNA mismatch repair protein [Streptococcus pneumoniae CGSP14]
gi|221231085|ref|YP_002510237.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae ATCC
700669]
gi|237649752|ref|ZP_04524004.1| DNA mismatch repair protein [Streptococcus pneumoniae CCRI 1974]
gi|237821450|ref|ZP_04597295.1| DNA mismatch repair protein [Streptococcus pneumoniae CCRI 1974M2]
gi|298230110|ref|ZP_06963791.1| DNA mismatch repair protein [Streptococcus pneumoniae str. Canada
MDR_19F]
gi|298255027|ref|ZP_06978613.1| DNA mismatch repair protein [Streptococcus pneumoniae str. Canada
MDR_19A]
gi|298501976|ref|YP_003723916.1| DNA mismatch repair protein [Streptococcus pneumoniae TCH8431/19A]
gi|303255123|ref|ZP_07341199.1| DNA mismatch repair protein [Streptococcus pneumoniae BS455]
gi|307066856|ref|YP_003875822.1| DNA mismatch repair protein [Streptococcus pneumoniae AP200]
gi|387756741|ref|YP_006063720.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae OXC141]
gi|387758536|ref|YP_006065514.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae INV200]
gi|405761627|ref|YP_006702223.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae SPNA45]
gi|415696722|ref|ZP_11456364.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 459-5]
gi|415748558|ref|ZP_11476610.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae SV35]
gi|415751284|ref|ZP_11478519.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae SV36]
gi|417678152|ref|ZP_12327553.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA17570]
gi|417693104|ref|ZP_12342293.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47901]
gi|417695339|ref|ZP_12344519.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47368]
gi|417697654|ref|ZP_12346827.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA41317]
gi|418073060|ref|ZP_12710323.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA11184]
gi|418082083|ref|ZP_12719285.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA44288]
gi|418084273|ref|ZP_12721461.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47281]
gi|418090805|ref|ZP_12727950.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA44452]
gi|418095272|ref|ZP_12732388.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA16531]
gi|418099761|ref|ZP_12736850.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
7286-06]
gi|418101886|ref|ZP_12738963.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
NP070]
gi|418104256|ref|ZP_12741316.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA44500]
gi|418108413|ref|ZP_12745448.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA41410]
gi|418109145|ref|ZP_12746174.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA49447]
gi|418118121|ref|ZP_12755082.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA18523]
gi|418122504|ref|ZP_12759439.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA44378]
gi|418124800|ref|ZP_12761723.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA44511]
gi|418127086|ref|ZP_12763984.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
NP170]
gi|418136248|ref|ZP_12773092.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA11663]
gi|418145421|ref|ZP_12782207.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA13637]
gi|418147663|ref|ZP_12784430.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA13856]
gi|418149755|ref|ZP_12786511.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA14798]
gi|418168272|ref|ZP_12804918.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA19077]
gi|418170405|ref|ZP_12807035.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA19451]
gi|418174995|ref|ZP_12811593.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA41437]
gi|418177232|ref|ZP_12813817.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA41565]
gi|418181816|ref|ZP_12818377.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA43380]
gi|418186201|ref|ZP_12822732.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47360]
gi|418188426|ref|ZP_12824941.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47373]
gi|418190646|ref|ZP_12827151.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47388]
gi|418194981|ref|ZP_12831462.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47688]
gi|418197097|ref|ZP_12833563.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47778]
gi|418199261|ref|ZP_12835710.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47976]
gi|418213381|ref|ZP_12840116.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA54644]
gi|418215660|ref|ZP_12842386.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
Netherlands15B-37]
gi|418217928|ref|ZP_12844597.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
NP127]
gi|418220120|ref|ZP_12846777.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47751]
gi|418222482|ref|ZP_12849128.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
5185-06]
gi|418228925|ref|ZP_12855536.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
EU-NP01]
gi|418231324|ref|ZP_12857913.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA07228]
gi|418233400|ref|ZP_12859981.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA08780]
gi|418235618|ref|ZP_12862187.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA19690]
gi|418237771|ref|ZP_12864328.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
NorthCarolina6A-23]
gi|419422218|ref|ZP_13962437.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA43264]
gi|419424244|ref|ZP_13964447.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
7533-05]
gi|419426378|ref|ZP_13966562.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
5652-06]
gi|419428451|ref|ZP_13968622.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA11856]
gi|419430628|ref|ZP_13970774.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
EU-NP05]
gi|419432833|ref|ZP_13972955.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA40183]
gi|419435090|ref|ZP_13975186.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
8190-05]
gi|419443829|ref|ZP_13983844.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA19923]
gi|419445938|ref|ZP_13985944.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
7879-04]
gi|419448097|ref|ZP_13988095.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
4075-00]
gi|419450191|ref|ZP_13990180.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
EU-NP02]
gi|419452332|ref|ZP_13992307.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
EU-NP03]
gi|419456775|ref|ZP_13996724.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA02254]
gi|419459046|ref|ZP_13998982.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA02270]
gi|419461316|ref|ZP_14001234.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA02714]
gi|419463437|ref|ZP_14003333.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA04175]
gi|419468104|ref|ZP_14007977.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA06083]
gi|419470216|ref|ZP_14010076.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA07914]
gi|419472291|ref|ZP_14012144.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA13430]
gi|419474565|ref|ZP_14014407.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA14688]
gi|419479081|ref|ZP_14018894.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA19101]
gi|419483446|ref|ZP_14023222.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA43257]
gi|419485663|ref|ZP_14025430.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA44128]
gi|419488682|ref|ZP_14028435.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA44386]
gi|419496618|ref|ZP_14036330.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47522]
gi|419503063|ref|ZP_14042739.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47760]
gi|419505176|ref|ZP_14044837.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA49194]
gi|419507284|ref|ZP_14046940.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA49542]
gi|419513796|ref|ZP_14053424.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
England14-9]
gi|419522476|ref|ZP_14062059.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA13723]
gi|419524950|ref|ZP_14064516.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA14373]
gi|419531472|ref|ZP_14070992.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47794]
gi|419533629|ref|ZP_14073137.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA17457]
gi|421205602|ref|ZP_15662669.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2090008]
gi|421210197|ref|ZP_15667189.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2070035]
gi|421226351|ref|ZP_15683065.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2072047]
gi|421228864|ref|ZP_15685542.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2061376]
gi|421231013|ref|ZP_15687663.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2080076]
gi|421233229|ref|ZP_15689854.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2061617]
gi|421235368|ref|ZP_15691969.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2071004]
gi|421239754|ref|ZP_15696307.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2080913]
gi|421242011|ref|ZP_15698540.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2081074]
gi|421246350|ref|ZP_15702841.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2082170]
gi|421248538|ref|ZP_15705001.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2082239]
gi|421265262|ref|ZP_15716146.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
SPAR27]
gi|421269620|ref|ZP_15720477.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
SPAR48]
gi|421271830|ref|ZP_15722677.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
SPAR55]
gi|421277984|ref|ZP_15728796.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA17301]
gi|421280223|ref|ZP_15731022.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA04672]
gi|421286705|ref|ZP_15737472.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA58771]
gi|421290982|ref|ZP_15741726.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA56348]
gi|421293272|ref|ZP_15743999.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA56113]
gi|421299902|ref|ZP_15750574.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA19998]
gi|421306387|ref|ZP_15757034.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA60132]
gi|421308652|ref|ZP_15759283.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA62681]
gi|421310886|ref|ZP_15761499.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA58981]
gi|421313159|ref|ZP_15763753.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA47562]
gi|61225739|sp|P0A3R1.1|HEXB_STRPN RecName: Full=DNA mismatch repair protein HexB
gi|61225740|sp|P0A3R2.1|HEXB_STRR6 RecName: Full=DNA mismatch repair protein HexB
gi|122279430|sp|Q04MR4.1|MUTL_STRP2 RecName: Full=DNA mismatch repair protein MutL
gi|238691184|sp|B2IS10.1|MUTL_STRPS RecName: Full=DNA mismatch repair protein MutL
gi|254766177|sp|B8ZKC9.1|MUTL_STRPJ RecName: Full=DNA mismatch repair protein MutL
gi|14971640|gb|AAK74354.1| DNA mismatch repair protein HexB [Streptococcus pneumoniae TIGR4]
gi|15457702|gb|AAK98964.1| DNA mismatch repair protein [Streptococcus pneumoniae R6]
gi|116076972|gb|ABJ54692.1| DNA mismatch repair protein HexB [Streptococcus pneumoniae D39]
gi|147757174|gb|EDK64213.1| DNA mismatch repair protein HexB [Streptococcus pneumoniae
SP11-BS70]
gi|147923722|gb|EDK74834.1| DNA mismatch repair protein HexB [Streptococcus pneumoniae
SP3-BS71]
gi|147926375|gb|EDK77448.1| DNA mismatch repair protein HexB [Streptococcus pneumoniae
SP6-BS73]
gi|147928480|gb|EDK79495.1| DNA mismatch repair protein HexB [Streptococcus pneumoniae
SP9-BS68]
gi|147931411|gb|EDK82389.1| DNA mismatch repair protein HexB [Streptococcus pneumoniae
SP23-BS72]
gi|172042907|gb|EDT50953.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae
CDC1873-00]
gi|182628492|gb|ACB89440.1| DNA mismatch repair protein [Streptococcus pneumoniae CGSP14]
gi|183393266|gb|ACC61793.1| DNA mismatch repair protein [Streptococcus pneumoniae]
gi|183393272|gb|ACC61796.1| DNA mismatch repair protein [Streptococcus pneumoniae]
gi|183571322|gb|EDT91850.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae SP195]
gi|183577800|gb|EDT98328.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae MLV-016]
gi|202073440|gb|ACC61792.1| DNA mismatch repair protein [Streptococcus pneumoniae]
gi|202073445|gb|ACC61795.1| DNA mismatch repair protein [Streptococcus pneumoniae]
gi|220673545|emb|CAR68031.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae ATCC
700669]
gi|251765212|gb|ACC61794.1| DNA mismatch repair protein [Streptococcus pneumoniae]
gi|298237571|gb|ADI68702.1| DNA mismatch repair protein [Streptococcus pneumoniae TCH8431/19A]
gi|301799330|emb|CBW31865.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae OXC141]
gi|301801125|emb|CBW33798.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae INV200]
gi|302597953|gb|EFL65023.1| DNA mismatch repair protein [Streptococcus pneumoniae BS455]
gi|306408393|gb|ADM83820.1| DNA mismatch repair enzyme (predicted ATPase) [Streptococcus
pneumoniae AP200]
gi|332075846|gb|EGI86313.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA17570]
gi|332202095|gb|EGJ16164.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA41317]
gi|332203336|gb|EGJ17403.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47368]
gi|332204187|gb|EGJ18252.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47901]
gi|353752598|gb|EHD33223.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA11184]
gi|353757520|gb|EHD38113.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA44288]
gi|353760576|gb|EHD41152.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47281]
gi|353766178|gb|EHD46718.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA44452]
gi|353772052|gb|EHD52558.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA16531]
gi|353773760|gb|EHD54255.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
7286-06]
gi|353776940|gb|EHD57414.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA41410]
gi|353777598|gb|EHD58070.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
NP070]
gi|353778690|gb|EHD59156.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA44500]
gi|353784438|gb|EHD64858.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA49447]
gi|353792970|gb|EHD73340.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA18523]
gi|353797977|gb|EHD78307.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA44378]
gi|353800891|gb|EHD81199.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
NP170]
gi|353801656|gb|EHD81958.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA44511]
gi|353813861|gb|EHD94088.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA13856]
gi|353816295|gb|EHD96504.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA13637]
gi|353817897|gb|EHD98097.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA14798]
gi|353836191|gb|EHE16279.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA19077]
gi|353838699|gb|EHE18776.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA19451]
gi|353843555|gb|EHE23599.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA41437]
gi|353845674|gb|EHE25714.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA41565]
gi|353850053|gb|EHE30057.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA43380]
gi|353854023|gb|EHE34003.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47360]
gi|353855568|gb|EHE35537.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47373]
gi|353858245|gb|EHE38205.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47388]
gi|353863100|gb|EHE43029.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47688]
gi|353865634|gb|EHE45541.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47778]
gi|353866849|gb|EHE46745.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47976]
gi|353870664|gb|EHE50535.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA54644]
gi|353874566|gb|EHE54421.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
Netherlands15B-37]
gi|353877069|gb|EHE56913.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
NP127]
gi|353877917|gb|EHE57756.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47751]
gi|353881570|gb|EHE61383.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
5185-06]
gi|353888990|gb|EHE68762.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA07228]
gi|353889984|gb|EHE69751.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA08780]
gi|353891363|gb|EHE71119.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
EU-NP01]
gi|353893547|gb|EHE73292.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA19690]
gi|353894904|gb|EHE74644.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
NorthCarolina6A-23]
gi|353903306|gb|EHE78830.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA11663]
gi|379533461|gb|EHY98674.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA02254]
gi|379533918|gb|EHY99130.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA02270]
gi|379535352|gb|EHZ00556.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA02714]
gi|379540716|gb|EHZ05887.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA04175]
gi|379547849|gb|EHZ12984.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA07914]
gi|379548374|gb|EHZ13506.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA06083]
gi|379553193|gb|EHZ18277.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA13430]
gi|379553702|gb|EHZ18785.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA11856]
gi|379560097|gb|EHZ25123.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA13723]
gi|379560654|gb|EHZ25676.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA14373]
gi|379562072|gb|EHZ27086.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA14688]
gi|379568591|gb|EHZ33570.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA17457]
gi|379571522|gb|EHZ36479.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA19923]
gi|379574415|gb|EHZ39358.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA19101]
gi|379578955|gb|EHZ43863.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA40183]
gi|379582957|gb|EHZ47834.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA43257]
gi|379588572|gb|EHZ53412.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA44128]
gi|379589549|gb|EHZ54388.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA43264]
gi|379590797|gb|EHZ55635.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA44386]
gi|379602743|gb|EHZ67513.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47522]
gi|379607090|gb|EHZ71836.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA49194]
gi|379609798|gb|EHZ74535.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47794]
gi|379610437|gb|EHZ75168.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47760]
gi|379613419|gb|EHZ78131.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA49542]
gi|379615396|gb|EHZ80102.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
7879-04]
gi|379616759|gb|EHZ81452.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
8190-05]
gi|379619338|gb|EHZ84010.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
5652-06]
gi|379621048|gb|EHZ85697.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
7533-05]
gi|379624909|gb|EHZ89537.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
4075-00]
gi|379625336|gb|EHZ89963.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
EU-NP02]
gi|379628295|gb|EHZ92899.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
EU-NP03]
gi|379631872|gb|EHZ96448.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
EU-NP05]
gi|379638286|gb|EIA02831.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
England14-9]
gi|381310889|gb|EIC51714.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae SV36]
gi|381318815|gb|EIC59532.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae SV35]
gi|381319815|gb|EIC60497.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 459-5]
gi|395575896|gb|EJG36456.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2070035]
gi|395578023|gb|EJG38551.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2090008]
gi|395597210|gb|EJG57417.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2080076]
gi|395597421|gb|EJG57627.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2072047]
gi|395598531|gb|EJG58732.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2061376]
gi|395603941|gb|EJG64074.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2061617]
gi|395604287|gb|EJG64419.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2071004]
gi|395610628|gb|EJG70704.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2080913]
gi|395611874|gb|EJG71928.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2081074]
gi|395615167|gb|EJG75183.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2082239]
gi|395616469|gb|EJG76480.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2082170]
gi|395869284|gb|EJG80399.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
SPAR27]
gi|395870272|gb|EJG81385.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
SPAR48]
gi|395877389|gb|EJG88458.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
SPAR55]
gi|395883103|gb|EJG94146.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA17301]
gi|395883580|gb|EJG94622.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA04672]
gi|395890964|gb|EJH01967.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA58771]
gi|395896326|gb|EJH07293.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA56113]
gi|395896782|gb|EJH07747.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA56348]
gi|395900999|gb|EJH11936.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA19998]
gi|395910097|gb|EJH20971.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA60132]
gi|395912797|gb|EJH23654.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA62681]
gi|395913846|gb|EJH24695.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA58981]
gi|395915130|gb|EJH25970.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA47562]
gi|404278516|emb|CCM09136.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae SPNA45]
gi|429317175|emb|CCP36928.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae
SPN034156]
gi|429318717|emb|CCP31920.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae
SPN034183]
gi|429320530|emb|CCP33893.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae
SPN994039]
gi|429322350|emb|CCP29934.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae
SPN994038]
Length = 649
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 154/368 (41%), Gaps = 41/368 (11%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMNQ 74
++P +++I + DVNV P K+++ + EK L+ V I +S Q
Sbjct: 280 RFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLK----------EQ 329
Query: 75 SMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPDETI 134
++ P + ++ K N E+VE +P+ ++N+ + E EP P +T
Sbjct: 330 TL--IPDALENLAKSTVRNREKVEQTILPL--KENTLYY---------EKTEPSRPSQT- 375
Query: 135 EVIDDMPRLQGSYRQSTPVTL-SLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKN 193
EV D L + T +LD + K +A R D+ H +D +
Sbjct: 376 EVADYQVELTDEGQDLTLFAKETLDRLTKPAKLHFAERKPANYDQLD----HPELDLASI 431
Query: 194 KEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL 253
+A +L R + S F +++ GQ + ++ + L+IIDQHA E+ +E +++
Sbjct: 432 DKAYDKLERE-EASSFPELEFFGQMHGTYLFAQGRDGLYIIDQHAAQERVKYEEYRESIG 490
Query: 254 ---IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNT 310
Q+L+VP + LK+ +P+ + G + + +L P+
Sbjct: 491 NVDQSQQQLLVPYIFEFPADDALRLKERMPLLEEVGVFLA--EYGENQFILREHPI---- 544
Query: 311 TLGREDIEELLF-MLQHTNSTEHCRPSRIRAMFA-SRACRKSVMIGRALSVGEMTGLVRN 368
+ E+IE ++ M T+ + RA A +C++S+ + L+
Sbjct: 545 WMAEEEIESGIYEMCDMLLLTKEVSIKKYRAELAIMMSCKRSIKANHRIDDHSARQLLYQ 604
Query: 369 MGRIDQPW 376
+ + D P+
Sbjct: 605 LSQCDNPY 612
>gi|349687418|ref|ZP_08898560.1| DNA mismatch repair protein [Gluconacetobacter oboediens 174Bp2]
Length = 636
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 79/162 (48%), Gaps = 13/162 (8%)
Query: 220 LGFIIVKYDSD--LFIIDQHATDEKYNFETLQKTTL---IKSQKLVVPQNLHLTKINQCI 274
LG IV +D L ++DQHA E+ E L++ L I++Q+L++P+ + L +
Sbjct: 449 LGTYIVSQTADGALVLVDQHAAHERLTHEILREQYLGGEIRAQRLLLPEVVDLPARQVEV 508
Query: 275 LKDNLPVFYKNGFEF-SFDSSDDGNVLLTSLP--MSKNTTLG--REDIEELLFMLQHTNS 329
L P + G E F + VL+ ++P + K +G R+ EEL T +
Sbjct: 509 LLSFGPGLARLGIEIEPFGGT---AVLVRTMPALLGKENPVGMLRDLAEELEADDLATPA 565
Query: 330 TEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGR 371
+R+ A+ A AC SV GR L+ EM L+R+M R
Sbjct: 566 QADALDARMDAIIARMACHGSVRAGRKLTHEEMNALLRDMER 607
>gi|88604448|ref|YP_504626.1| DNA mismatch repair protein MutL [Methanospirillum hungatei JF-1]
gi|88189910|gb|ABD42907.1| DNA mismatch repair protein MutL [Methanospirillum hungatei JF-1]
Length = 599
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 84/185 (45%), Gaps = 12/185 (6%)
Query: 197 ESELNRVIKKSMFEKMKIVGQFNLGFIIVKYD--SDLFIIDQHATDEKYNFETL--QKTT 252
ES + ++ F ++ +GQ G IV D LF+IDQHA E+ ++ L Q++
Sbjct: 398 ESADDATVRDERFPELFWIGQVG-GTYIVASDKTGALFLIDQHAAHERVRYDQLKQQESL 456
Query: 253 LIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTL 312
+K+Q+L+ P L L+ ++ LPV GF D V +P+ L
Sbjct: 457 HLKTQELIAPVVLTLSPSEAGLIPSVLPVLTDEGFIIEPFGQDTWCV--RGVPV----VL 510
Query: 313 GREDIEELLFMLQHTNSTEHCRPSRIR-AMFASRACRKSVMIGRALSVGEMTGLVRNMGR 371
GR + E + + T +E P R++ + ACR +V G L+ + ++ + +
Sbjct: 511 GRYEDPETVREIIGTILSEDEGPVRLKEQVLRLVACRSAVKAGAVLTPEQGMDIINQLSQ 570
Query: 372 IDQPW 376
PW
Sbjct: 571 TADPW 575
>gi|419481225|ref|ZP_14021021.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA40563]
gi|379582632|gb|EHZ47510.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA40563]
Length = 643
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 154/368 (41%), Gaps = 41/368 (11%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMNQ 74
++P +++I + DVNV P K+++ + EK L+ V I +S Q
Sbjct: 274 RFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLK----------EQ 323
Query: 75 SMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPDETI 134
++ P + ++ K N E+VE +P+ ++N+ + E EP P +T
Sbjct: 324 TL--IPDALENLAKSTVRNREKVEQTILPL--KENTLYY---------EKTEPSRPSQT- 369
Query: 135 EVIDDMPRLQGSYRQSTPVTL-SLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKN 193
EV D L + T +LD + K +A R D+ H +D +
Sbjct: 370 EVADYQVELTDEGQDLTLFAKETLDRLTKPAKLHFAERKPANYDQLD----HPELDLASI 425
Query: 194 KEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL 253
+A +L R + S F +++ GQ + ++ + L+IIDQHA E+ +E +++
Sbjct: 426 DKAYDKLERE-EASSFPELEFFGQMHGTYLFAQGRDGLYIIDQHAAQERVKYEEYRESIG 484
Query: 254 ---IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNT 310
Q+L+VP + LK+ +P+ + G + + +L P+
Sbjct: 485 NVDQSQQQLLVPYIFEFPADDALRLKERMPLLEEVGVFLA--EYGENQFILREHPI---- 538
Query: 311 TLGREDIEELLF-MLQHTNSTEHCRPSRIRAMFA-SRACRKSVMIGRALSVGEMTGLVRN 368
+ E+IE ++ M T+ + RA A +C++S+ + L+
Sbjct: 539 WMAEEEIESGIYEMCDMLLLTKEVSIKKYRAELAIMMSCKRSIKANHRIDDHSARQLLYQ 598
Query: 369 MGRIDQPW 376
+ + D P+
Sbjct: 599 LSQCDNPY 606
>gi|418142967|ref|ZP_12779770.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA13494]
gi|353810710|gb|EHD90960.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA13494]
Length = 649
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 154/368 (41%), Gaps = 41/368 (11%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMNQ 74
++P +++I + DVNV P K+++ + EK L+ V I +S Q
Sbjct: 280 RFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLK----------EQ 329
Query: 75 SMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPDETI 134
++ P + ++ K N E+VE +P+ ++N+ + E EP P +T
Sbjct: 330 TL--IPDALENLAKSTVRNREKVEQTILPL--KENTLYY---------EKTEPSRPSQT- 375
Query: 135 EVIDDMPRLQGSYRQSTPVTL-SLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKN 193
EV D L + T +LD + K +A R D+ H +D +
Sbjct: 376 EVADYQVELTDEGQDLTLFAKETLDRLTKPAKLHFAERKPANYDQLD----HPELDLASI 431
Query: 194 KEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL 253
+A +L R + S F +++ GQ + ++ + L+IIDQHA E+ +E +++
Sbjct: 432 DKAYDKLERE-EASSFPELEFFGQMHGTYLFAQGRDGLYIIDQHAAQERVKYEEYRESIG 490
Query: 254 ---IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNT 310
Q+L+VP + LK+ +P+ + G + + +L P+
Sbjct: 491 NVDQSQQQLLVPYIFEFPADDALRLKERMPLLEEVGVFLA--EYGENQFILREHPI---- 544
Query: 311 TLGREDIEELLF-MLQHTNSTEHCRPSRIRAMFA-SRACRKSVMIGRALSVGEMTGLVRN 368
+ E+IE ++ M T+ + RA A +C++S+ + L+
Sbjct: 545 WMAEEEIESGIYEMCDMLLLTKEVSIKKYRAELAIMMSCKRSIKANHRIDDHSARQLLYQ 604
Query: 369 MGRIDQPW 376
+ + D P+
Sbjct: 605 LSQCDNPY 612
>gi|417675960|ref|ZP_12325373.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA17545]
gi|332076625|gb|EGI87087.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA17545]
Length = 649
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 154/368 (41%), Gaps = 41/368 (11%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMNQ 74
++P +++I + DVNV P K+++ + EK L+ V I +S Q
Sbjct: 280 RFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLK----------EQ 329
Query: 75 SMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPDETI 134
++ P + ++ K N E+VE +P+ ++N+ + E EP P +T
Sbjct: 330 TL--IPDALENLAKSTVRNREKVEQTILPL--KENTLYY---------EKTEPSRPSQT- 375
Query: 135 EVIDDMPRLQGSYRQSTPVTL-SLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKN 193
EV D L + T +LD + K +A R D+ H +D +
Sbjct: 376 EVADYQVELTDEEQDLTLFAKETLDRLTKPAKLHFAERKPANYDQLD----HPELDLASI 431
Query: 194 KEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL 253
+A +L R + S F +++ GQ + ++ + L+IIDQHA E+ +E +++
Sbjct: 432 DKAYDKLERE-EASSFPELEFFGQMHGTYLFAQGRDGLYIIDQHAAQERVKYEEYRESIG 490
Query: 254 ---IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNT 310
Q+L+VP + LK+ +P+ + G + + +L P+
Sbjct: 491 NVDQSQQQLLVPYIFEFPADDALRLKERMPLLEEVGVFLA--EYGENQFILREHPI---- 544
Query: 311 TLGREDIEELLF-MLQHTNSTEHCRPSRIRAMFA-SRACRKSVMIGRALSVGEMTGLVRN 368
+ E+IE ++ M T+ + RA A +C++S+ + L+
Sbjct: 545 WMAEEEIESGIYEMCDMLLLTKEVSIKKYRAELAIMMSCKRSIKANHRIDDHSARQLLYQ 604
Query: 369 MGRIDQPW 376
+ + D P+
Sbjct: 605 LSQCDNPY 612
>gi|387625671|ref|YP_006061843.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae INV104]
gi|444383819|ref|ZP_21181999.1| DNA mismatch repair protein [Streptococcus pneumoniae PCS8106]
gi|444385836|ref|ZP_21183905.1| DNA mismatch repair protein [Streptococcus pneumoniae PCS8203]
gi|301793453|emb|CBW35826.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae INV104]
gi|444248262|gb|ELU54774.1| DNA mismatch repair protein [Streptococcus pneumoniae PCS8106]
gi|444249153|gb|ELU55648.1| DNA mismatch repair protein [Streptococcus pneumoniae PCS8203]
Length = 649
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 154/368 (41%), Gaps = 41/368 (11%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMNQ 74
++P +++I + DVNV P K+++ + EK L+ V I +S Q
Sbjct: 280 RFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLK----------EQ 329
Query: 75 SMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPDETI 134
++ P + ++ K N E+VE +P+ ++N+ + E EP P +T
Sbjct: 330 TL--IPDALENLAKSTVRNREKVEQTILPL--KENTLYY---------EKTEPSRPSQT- 375
Query: 135 EVIDDMPRLQGSYRQSTPVTL-SLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKN 193
EV D L + T +LD + K +A R D+ H +D +
Sbjct: 376 EVADYQVELTDEGQDLTLFAKETLDRLTKPAKLHFAERKPANYDQLD----HPELDLASI 431
Query: 194 KEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL 253
+A +L R + S F +++ GQ + ++ + L+IIDQHA E+ +E +++
Sbjct: 432 DKAYDKLERE-EASSFPELEFFGQMHGTYLFAQGRDGLYIIDQHAAQERVKYEEYRESIG 490
Query: 254 ---IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNT 310
Q+L+VP + LK+ +P+ + G + + +L P+
Sbjct: 491 NVDQSQQQLLVPYIFEFPADDALRLKERMPLLEEVGVFLA--EYGENQFILREHPI---- 544
Query: 311 TLGREDIEELLF-MLQHTNSTEHCRPSRIRAMFA-SRACRKSVMIGRALSVGEMTGLVRN 368
+ E+IE ++ M T+ + RA A +C++S+ + L+
Sbjct: 545 WMAEEEIESGIYEMCDMLLLTKEVSIKKYRAELAIMMSCKRSIKANHRIDDHSARQLLYQ 604
Query: 369 MGRIDQPW 376
+ + D P+
Sbjct: 605 LSQCDNPY 612
>gi|222479064|ref|YP_002565301.1| DNA mismatch repair protein MutL [Halorubrum lacusprofundi ATCC
49239]
gi|222451966|gb|ACM56231.1| DNA mismatch repair protein MutL [Halorubrum lacusprofundi ATCC
49239]
Length = 767
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 80/173 (46%), Gaps = 13/173 (7%)
Query: 212 MKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL--IKSQKLVVPQNLHLTK 269
++++GQ + ++I + L +IDQHA DE+ N+E LQ +Q L P + LT
Sbjct: 568 LRVLGQLHETYVIAEAPDGLVLIDQHAADERVNYERLQTAFADGADAQALAEPVRIELTA 627
Query: 270 INQCILK---DNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQH 326
+ + D+L G F + +D+ V++ S+P + L E + ++L L
Sbjct: 628 REAALFEEFVDDL-----AGVGFRAERADEREVVVESVPAVFDAALDPELLRDVLSALVG 682
Query: 327 TNSTEHCRPSR--IRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPWV 377
++T P + + A AC SV +L+ G + L+ + + P+
Sbjct: 683 -DATAGDEPVTDVVDELLADLACYPSVTGNTSLTEGSVVDLLDRLDDCENPYA 734
>gi|421540697|ref|ZP_15986839.1| DNA mismatch repair protein mutL [Neisseria meningitidis 93004]
gi|402318247|gb|EJU53771.1| DNA mismatch repair protein mutL [Neisseria meningitidis 93004]
Length = 658
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 94/402 (23%), Positives = 169/402 (42%), Gaps = 72/402 (17%)
Query: 1 MKLVNEVYHQ-FNNHQYPFIILNIEMSRDSVDVNVTPDKRQI-FMDHEK---LLLATVKV 55
+ V + Y +N P +L +++ ++VDVNV P K +I F D ++ L+ T+
Sbjct: 264 LHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSQQVHQLVFHTLNK 323
Query: 56 HITDSYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETI-----PVPSEDNS 110
+ D+ A ++ +S+ SN+ EV H+ P+PSE++S
Sbjct: 324 ALADTRA--------DLTESV---------------SNAGEVLHDITGVTPAPMPSENDS 360
Query: 111 N--FSHEANLQQSPETVEPDTPDETIEVIDDMPR-LQGSYRQSTPVTLSLDIIQDQLKAR 167
F +N P +PDT + P Q +Y P SL + + +
Sbjct: 361 ENLFDRASNY---PTGNKPDTRNAFGASGKTAPMPYQSAY---APQQRSLSLRESRAAMN 414
Query: 168 -YARRTVQAQD------RCVENRFHANIDPSKNKEAESEL---NRVIKKSMFEKMKIVGQ 217
YA + D R + RF N+ PS+ +++ + + S +
Sbjct: 415 TYAELYKKTDDIDLELSRFEQARF-GNM-PSETPAPQTDTPLSDGIPSPSELPPLGFAIA 472
Query: 218 FNLG-FIIVKYDSDLFIIDQHATDEKYNFETL----QKTTLIKSQKLVVPQNLHLTKINQ 272
LG +I+ + + L +ID HA E+ N+E + Q+ ++SQ+L++P +
Sbjct: 473 QLLGIYILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGKLQSQRLLIPVTFAASHEEC 532
Query: 273 CILKDNLPVFYKNGFEFSFDSSDDGNVL-LTSLPMSKNTTLGREDI----EELLFMLQHT 327
L D G E S GN L + ++P LG+ D+ +++L L
Sbjct: 533 AALADYAETLAGFGLEL---SDMGGNTLAVRAVP----AMLGKADVVSLAKDVLSELAQV 585
Query: 328 NSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
S++ + A+ +C S+ GR L++ EM L+R+M
Sbjct: 586 GSSQTIEEHE-NHILATMSCHGSIRAGRRLTLPEMNALLRDM 626
>gi|378972805|ref|YP_005221409.1| DNA mismatch repair protein MutL [Treponema pallidum subsp.
pertenue str. SamoaD]
gi|378973872|ref|YP_005222478.1| DNA mismatch repair protein MutL [Treponema pallidum subsp.
pertenue str. Gauthier]
gi|378981781|ref|YP_005230086.1| DNA mismatch repair protein MutL [Treponema pallidum subsp.
pertenue str. CDC2]
gi|374677128|gb|AEZ57421.1| DNA mismatch repair protein MutL [Treponema pallidum subsp.
pertenue str. SamoaD]
gi|374678198|gb|AEZ58490.1| DNA mismatch repair protein MutL [Treponema pallidum subsp.
pertenue str. CDC2]
gi|374679267|gb|AEZ59558.1| DNA mismatch repair protein MutL [Treponema pallidum subsp.
pertenue str. Gauthier]
Length = 648
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 88/200 (44%), Gaps = 23/200 (11%)
Query: 190 PSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQ 249
P+ E ++ ++ F K++GQ FI V+ ++ L++IDQHA E+ F+TLQ
Sbjct: 452 PAPAAEGDAPVHNHTHTGAF---KVLGQVAGTFIAVERNNALYLIDQHAAHERIIFDTLQ 508
Query: 250 KTTLIKSQKLVVPQNLHLTKINQC-ILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSK 308
+ L +Q L++P ++H + I+ GF F DG+ +T++P+
Sbjct: 509 R-NLGTAQILLIPYHIHPRSDEEARIMHRACTELSPAGFR--FHEEPDGSWHVTAVPLHW 565
Query: 309 NTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRN 368
R E+L + ++ H +R + A+ ACR + G L + LV
Sbjct: 566 -----RGSEEQLAHDILYSGKNAH---DILRHVLATCACRSACKDGTILDDATLHSLVEQ 617
Query: 369 MGRIDQP--------WVSMG 380
+ Q W+ +G
Sbjct: 618 AFALPQSRCPHGRPIWIVIG 637
>gi|365830824|ref|ZP_09372387.1| DNA mismatch repair protein MutL [Coprobacillus sp. 3_3_56FAA]
gi|365262834|gb|EHM92706.1| DNA mismatch repair protein MutL [Coprobacillus sp. 3_3_56FAA]
Length = 610
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 80/380 (21%), Positives = 162/380 (42%), Gaps = 65/380 (17%)
Query: 4 VNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYA 62
+N Y ++ + +YP I+NIE+ VDVNV P K ++ E L + ++D+ A
Sbjct: 266 INNAYRRYLADKRYPIAIVNIEIDPYLVDVNVHPSKLEVRFSKESQLRELIYQGVSDALA 325
Query: 63 -IGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANL-QQ 120
+ T D + + + +++E+ S ++ +E++P+ + + F EA+ Q
Sbjct: 326 KVNLTYDAT----AEYKKTKAPLNLEQ----PSLDLTYESVPIKTIEQPRF--EADFPQN 375
Query: 121 SPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCV 180
E V D DD ++ + II DQ + +
Sbjct: 376 DQEVVFKDAS------FDDFTFVKEETSEY--------IIPDQ--------------QII 407
Query: 181 ENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATD 240
E + ++P + +++KK +F K GQ + +II + ++ ++I+DQHA
Sbjct: 408 ETK----VEPRE---------KLMKKKLFVK----GQVHGTYIICEDETGMYIVDQHAGQ 450
Query: 241 EKYNFETL---QKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDG 297
E+ N+E + + + L+VP L I+++ + K G + + +
Sbjct: 451 ERINYEYFLEKYQNLDLSMRDLLVPITLEYPLSEFLIIEERKDLLTKVG--INLEVFGNS 508
Query: 298 NVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRAL 357
++ LP+ + IE+++ L + N + + A+ +C+ S+ L
Sbjct: 509 GYVIKQLPLWMQNIDEQVFIEDMMMQLLNDNKIDVIKLQ--DHAIATLSCKASLKANTHL 566
Query: 358 SVGEMTGLVRNMGRIDQPWV 377
S M ++ N+ R D P+V
Sbjct: 567 STEGMQNIIDNLMRCDNPYV 586
>gi|403383257|ref|ZP_10925314.1| DNA mismatch repair protein [Kurthia sp. JC30]
Length = 642
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 81/400 (20%), Positives = 158/400 (39%), Gaps = 71/400 (17%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K + + YH + ++P +++IE DVNV P K+QI + E L+ ++
Sbjct: 264 KAIIDAYHTYLPIGRFPIAVIHIEGDPFLTDVNVHPSKQQIRLSKEGDLMKLIE------ 317
Query: 61 YAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQ 120
+++++S+ Q + M+K ++ P D NF + ++
Sbjct: 318 ---------SSLHKSIRQSMQAPEVMKKPKKQT-----------PQSDQINFWKGLDYER 357
Query: 121 SPETVEPDTPDETIEVIDDMPRLQGSYRQS-----TPVTLSLDIIQDQLKARY-----AR 170
+P +E D PR + + + TPV S Q K RY +
Sbjct: 358 TP-----------MEQFGDKPRPKPTMPPANQPFTTPVEAS-----PQSKLRYELNEPST 401
Query: 171 RTVQAQDRCVENRFHANIDPSKNKEAESELNRVI----------KKSMFEKMKIVGQFNL 220
+ + R N+D +EA E R K +F ++ I+GQ +
Sbjct: 402 SGFSEPETWEQIRERENVDMPAIEEATMEPTRETFESAVEVPEEPKEIFPEVDIIGQIHG 461
Query: 221 GFIIVKYDSDLFIIDQHATDEKYNFETLQ----KTTLIKSQKLVVPQNLHLTKINQCILK 276
+II + + ++IDQHA E+ +E + + + Q L++P H + L
Sbjct: 462 TYIIAQSEDGFYLIDQHAAQERIKYEYFKEMVGEVNAGERQALLLPLTFHYSADEALHLH 521
Query: 277 DNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPS 336
+ + + G + + ++ P + +E IE L+ + H T+ +
Sbjct: 522 EYMDALNEVG--VYLEDFGQHSFIVRDHPTWFPKGMEQEIIESLIEQVLHERKTDIKKLR 579
Query: 337 RIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
A+ S C+KS+ L +MT L+ ++ + + P+
Sbjct: 580 EAAAIMMS--CKKSIKANHYLDKQQMTRLLVDLKKCENPF 617
>gi|451981523|ref|ZP_21929875.1| DNA mismatch repair protein mutL [Nitrospina gracilis 3/211]
gi|451761196|emb|CCQ91139.1| DNA mismatch repair protein mutL [Nitrospina gracilis 3/211]
Length = 643
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 70/371 (18%), Positives = 134/371 (36%), Gaps = 48/371 (12%)
Query: 9 HQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVD 68
H Q+P + L M D +DVNV P K ++ ++ + V I ++ A
Sbjct: 294 HLLPRGQHPVLFLYFTMDPDLLDVNVHPAKAEVRFAYQSEVYRFVMEAIQEALA------ 347
Query: 69 GNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPD 128
GN + EQ P + P S S H AN +
Sbjct: 348 GNEKSGLPEQKPLA--------------------PSESAGQSAVPHVANGASAETYASVP 387
Query: 129 TPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANI 188
P+ PR Q ++ S + L++ Y + D R I
Sbjct: 388 RPNLEHAPAGPPPRYQQTH--------SFQEMGQALQSFYGKGG--GHDSVQPGRLPPEI 437
Query: 189 DPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETL 248
D + K R + ++ + +GQ N FI+++ + ++DQH E+ +E
Sbjct: 438 DLFRTKP------RAVSDMIYSDFEPLGQLNNSFIVMQGRRGVLVVDQHIAHERVLYERF 491
Query: 249 QKTTL---IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLP 305
+K + ++ Q L+ P + L + LP K G E ++ LL S+P
Sbjct: 492 KKAAMERKVEIQNLLFPLAIEFAPAEAQALVEELPELAKLGLE--MEAFGTNGFLLRSVP 549
Query: 306 MSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGL 365
+ + E+ L + +H + + +CR ++ + + + ++ L
Sbjct: 550 AILKSHDHEAVVREIAAALAR-DEAQHSLQDKYDDVIIMMSCRNAIKVNHPMELDQIKKL 608
Query: 366 VRNMGRIDQPW 376
+ ++ + P+
Sbjct: 609 LHDLEMTEMPY 619
>gi|15639295|ref|NP_218744.1| DNA mismatch repair protein (mutL) [Treponema pallidum subsp.
pallidum str. Nichols]
gi|189025537|ref|YP_001933309.1| DNA mismatch repair protein MutL [Treponema pallidum subsp.
pallidum SS14]
gi|378974934|ref|YP_005223542.1| DNA mismatch repair protein MutL [Treponema pallidum subsp.
pallidum DAL-1]
gi|384421836|ref|YP_005631195.1| DNA mismatch repair protein MutL [Treponema pallidum subsp.
pallidum str. Chicago]
gi|408502189|ref|YP_006869633.1| DNA mismatch repair protein MutL [Treponema pallidum subsp.
pallidum str. Mexico A]
gi|3322578|gb|AAC65291.1| DNA mismatch repair protein (mutL) [Treponema pallidum subsp.
pallidum str. Nichols]
gi|189018112|gb|ACD70730.1| DNA mismatch repair protein MutL [Treponema pallidum subsp.
pallidum SS14]
gi|291059702|gb|ADD72437.1| DNA mismatch repair protein MutL [Treponema pallidum subsp.
pallidum str. Chicago]
gi|374680332|gb|AEZ60622.1| DNA mismatch repair protein MutL [Treponema pallidum subsp.
pallidum DAL-1]
gi|408475552|gb|AFU66317.1| DNA mismatch repair protein MutL [Treponema pallidum subsp.
pallidum str. Mexico A]
Length = 648
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 88/200 (44%), Gaps = 23/200 (11%)
Query: 190 PSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQ 249
P+ E ++ ++ F K++GQ FI V+ ++ L++IDQHA E+ F+TLQ
Sbjct: 452 PAPAAEGDAPVHNHTHTGAF---KVLGQVAGTFIAVERNNALYLIDQHAAHERIIFDTLQ 508
Query: 250 KTTLIKSQKLVVPQNLHLTKINQC-ILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSK 308
+ L +Q L++P ++H + I+ GF F DG+ +T++P+
Sbjct: 509 R-NLGTAQILLIPYHIHPRSDEEARIMHRACTELSPAGFR--FHEEPDGSWHVTAVPLHW 565
Query: 309 NTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRN 368
R E+L + ++ H +R + A+ ACR + G L + LV
Sbjct: 566 -----RGSEEQLAHDILYSGKNAH---DILRHVLATCACRSACKDGTILDDATLHSLVEQ 617
Query: 369 MGRIDQP--------WVSMG 380
+ Q W+ +G
Sbjct: 618 AFALPQSRCPHGRPIWIVIG 637
>gi|421208064|ref|ZP_15665089.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2070005]
gi|421219426|ref|ZP_15676288.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2070425]
gi|421224058|ref|ZP_15680804.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2070768]
gi|421297639|ref|ZP_15748335.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA60080]
gi|395576534|gb|EJG37088.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2070005]
gi|395591226|gb|EJG51522.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2070425]
gi|395591394|gb|EJG51689.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2070768]
gi|395905010|gb|EJH15919.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA60080]
Length = 649
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 154/368 (41%), Gaps = 41/368 (11%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMNQ 74
++P +++I + DVNV P K+++ + EK L+ V I +S Q
Sbjct: 280 RFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLK----------EQ 329
Query: 75 SMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPDETI 134
++ P + ++ K N E+VE +P+ ++N+ + E EP P +T
Sbjct: 330 TL--IPDALENLAKSTVRNREKVEQTILPL--KENTLYY---------EKTEPSRPSQT- 375
Query: 135 EVIDDMPRLQGSYRQSTPVTL-SLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKN 193
EV D L + T +LD + K +A R D+ H +D +
Sbjct: 376 EVADYQVELTDEGQDLTLFAKETLDRLTKPAKLHFAERKPANYDQLD----HPELDLASI 431
Query: 194 KEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL 253
+A +L R + S F +++ GQ + ++ + L+IIDQHA E+ +E +++
Sbjct: 432 DKAYDKLERE-EASSFPELEFFGQMHGTYLFAQGRDGLYIIDQHAAQERVKYEEYRESIG 490
Query: 254 ---IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNT 310
Q+L+VP + LK+ +P+ + G + + +L P+
Sbjct: 491 NVDQSQQQLLVPYIFEFPADDALRLKERMPLLEEVGVFLA--EYGENQFILREHPI---- 544
Query: 311 TLGREDIEELLF-MLQHTNSTEHCRPSRIRAMFA-SRACRKSVMIGRALSVGEMTGLVRN 368
+ E+IE ++ M T+ + RA A +C++S+ + L+
Sbjct: 545 WMAEEEIESGIYEMCDMLLLTKEVSIKKYRAELAIMMSCKRSIKANHRIDDHSARQLLYQ 604
Query: 369 MGRIDQPW 376
+ + D P+
Sbjct: 605 LSQCDNPY 612
>gi|209543574|ref|YP_002275803.1| DNA mismatch repair protein MutL [Gluconacetobacter diazotrophicus
PAl 5]
gi|209531251|gb|ACI51188.1| DNA mismatch repair protein MutL [Gluconacetobacter diazotrophicus
PAl 5]
Length = 639
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 77/170 (45%), Gaps = 20/170 (11%)
Query: 213 KIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL---IKSQKLVVPQNLHLTK 269
+++G + + V D L ++DQHA E+ E L+ L +++Q+L++P+ + L +
Sbjct: 450 QVMGTY---IVAVSGDGSLVLVDQHAAHERLTHERLRARYLDGTLRAQRLLLPEVVTLPR 506
Query: 270 INQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLF-MLQHTN 328
+L G E + G VL+ +LP LG +D LL M
Sbjct: 507 GQADLLLSFAGTLAALGVEI--EPFGGGAVLVRALP----ALLGTDDPAGLLRDMADELA 560
Query: 329 STEHCRPS-------RIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGR 371
+ P R+ A+ A AC SV GR+L+ EM L+R+M R
Sbjct: 561 EDDLADPGDTGALDGRLDAVIARMACHGSVRAGRSLTRAEMDALLRDMER 610
>gi|421555039|ref|ZP_16000978.1| DNA mismatch repair protein mutL [Neisseria meningitidis 98008]
gi|402332192|gb|EJU67523.1| DNA mismatch repair protein mutL [Neisseria meningitidis 98008]
Length = 658
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 75/157 (47%), Gaps = 17/157 (10%)
Query: 222 FIIVKYDSDLFIIDQHATDEKYNFETL----QKTTLIKSQKLVVPQNLHLTKINQCILKD 277
+I+ + + L +ID HA E+ N+E + Q+ ++SQ+L++P + L D
Sbjct: 478 YILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGKLQSQRLLIPATFAASHEECAALAD 537
Query: 278 NLPVFYKNGFEFSFDSSDDGNVL-LTSLPMSKNTTLGREDI----EELLFMLQHTNSTEH 332
+ G E S GN L + ++P LG+ D+ +++L L S++
Sbjct: 538 HAETLAGFGLEL---SDMGGNTLAVRAVP----AMLGKADVVSLAKDILGELAQVGSSQT 590
Query: 333 CRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
R + A+ +C S+ GR L++ EM L+R+M
Sbjct: 591 IEEHENR-ILATMSCHGSIRSGRRLTLPEMNALLRDM 626
>gi|334143605|ref|YP_004536761.1| DNA mismatch repair protein mutL [Thioalkalimicrobium cyclicum
ALM1]
gi|333964516|gb|AEG31282.1| DNA mismatch repair protein mutL [Thioalkalimicrobium cyclicum
ALM1]
Length = 602
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 77/168 (45%), Gaps = 17/168 (10%)
Query: 209 FEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTT---LIKSQKLVVPQNL 265
F K +I G F I+ + ++ L ++D HA E+ +E L+K I SQ L+VP L
Sbjct: 413 FAKAQIKGIF----ILAENEAGLVLVDMHAAHERIVYERLKKQWQQQTIVSQPLLVP--L 466
Query: 266 HLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELL---F 322
LT + ++ + + F+F+ + + ++P L DI ELL F
Sbjct: 467 MLTLSDAAVMHWEANPEWWTQWGFAFEQVGPAQLRVIAVP----ALLQGLDISELLQKVF 522
Query: 323 M-LQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
+ E R A+ + RAC SV R L++ EM L+R+M
Sbjct: 523 ADWLADQAPETALEERFAAILSRRACHGSVRANRQLTLAEMNQLLRDM 570
>gi|338706271|ref|YP_004673039.1| DNA mismatch repair protein MutL [Treponema paraluiscuniculi
Cuniculi A]
gi|335344332|gb|AEH40248.1| DNA mismatch repair protein MutL [Treponema paraluiscuniculi
Cuniculi A]
Length = 648
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 88/200 (44%), Gaps = 23/200 (11%)
Query: 190 PSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQ 249
P+ E ++ ++ F K++GQ FI V+ ++ L++IDQHA E+ F+TLQ
Sbjct: 452 PAPAAEGDAPVHNHTHTGAF---KVLGQVAGTFIAVERNNALYLIDQHAAHERIIFDTLQ 508
Query: 250 KTTLIKSQKLVVPQNLHLTKINQC-ILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSK 308
+ L +Q L++P ++H + I+ GF F DG+ +T++P+
Sbjct: 509 R-NLGTAQILLIPYHIHPRSDEEARIMHRACTELSPAGFR--FHEEPDGSWHVTAVPLHW 565
Query: 309 NTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRN 368
R E+L + ++ H +R + A+ ACR + G L + LV
Sbjct: 566 -----RGSEEQLAHDILYSGKNAH---DILRHVLATCACRSACKDGTILDDATLHSLVEQ 617
Query: 369 MGRIDQP--------WVSMG 380
+ Q W+ +G
Sbjct: 618 AFALPQSRCPHGRPIWIVIG 637
>gi|268323523|emb|CBH37111.1| DNA mismatch repair protein [uncultured archaeon]
Length = 573
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 77/158 (48%), Gaps = 8/158 (5%)
Query: 222 FIIVKYDSD-LFIIDQHATDEKYNFETL--QKTTLIKSQKLVVPQNLHLTKINQCILKDN 278
+II + ++D + +IDQHA E+ NFE L + I Q L+ P L+ +++N
Sbjct: 397 YIIAQSEADDVIMIDQHAAAERANFERLIERYGHRIDKQTLLRPYMPELSPHQFYRIREN 456
Query: 279 LPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRI 338
GF+ + D + ++ ++P+ + +G ++I E++ L + R RI
Sbjct: 457 EEALRDMGFDI--ERLGDDSYIIRAIPVVFHGMIGEDEITEVMVRLVEESGK---REERI 511
Query: 339 RAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+ +F++ AC+ S+ G LS M +V + P+
Sbjct: 512 KVLFSTAACKASIKAGEKLSYDSMRAIVAGLRNAKIPF 549
>gi|253316433|ref|ZP_04839646.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
str. CF-Marseille]
Length = 669
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 84/404 (20%), Positives = 177/404 (43%), Gaps = 53/404 (13%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K + E YH ++P +NIEM VDVNV P K ++ + E+ L + I ++
Sbjct: 265 KAILEGYHTLLTIGRFPICYINIEMDPILVDVNVHPTKLEVRLSKEEQLYQLIVSKIQEA 324
Query: 61 YAIGFTVDGNNM------NQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSH 114
+ + NN+ N+ + ++ E QR N+E + +T SE++++ S
Sbjct: 325 FKDRILIPKNNLDYVPKKNKVLYSFEQQKIEFE--QRQNTENNQEKTF--SSEESNSKSF 380
Query: 115 EANLQQSPETVEPDTPDETIE------VIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARY 168
A Q ++ D+ + + + DD +S+ + + +D K +
Sbjct: 381 MAENQNDEIVIKEDSYNPFVTKTSESLITDD---------ESSGYNNTCEKDEDYFKKQ- 430
Query: 169 ARRTVQAQDRCVENRFHANIDPSKNKEAES--ELNRVIK------KSMFEKMKIVGQFNL 220
+ +Q D+ ++ A++ +NK ++ ++N + K M+IVGQ +
Sbjct: 431 -QEILQEMDQTFDSNEDASVQNYENKASDDYYDVNDIKGTKSKDPKRRIPYMEIVGQVHG 489
Query: 221 GFIIVKYDSDLFIIDQHATDEKYNFETLQKT---TLIKSQKLVVPQNLHLTKINQCILKD 277
+II + + +++IDQHA E+ +E + + Q L++P H +K Q ++
Sbjct: 490 TYIIAQNEFGMYMIDQHAAQERIKYEYFRDKIGEVTNEVQDLLIPLTFHFSKDEQLVIDQ 549
Query: 278 NLPVFYKNGFE---FSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLF-MLQHTNSTEHC 333
YKN + + + +++S P+ ++++EE++ M++ +
Sbjct: 550 -----YKNELQQVGIMLEHFGGHDYIVSSYPV----WFPKDEVEEIIKDMIELILEEKKV 600
Query: 334 RPSRIRAMFA-SRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
++R A +C+KS+ L EM+ L+ + + P+
Sbjct: 601 DIKKLREDVAIMMSCKKSIKANHYLQKHEMSDLIDQLREAEDPF 644
>gi|15924287|ref|NP_371821.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
Mu50]
gi|15926879|ref|NP_374412.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
N315]
gi|150393845|ref|YP_001316520.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
JH1]
gi|156979617|ref|YP_001441876.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
Mu3]
gi|255006083|ref|ZP_05144684.2| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
Mu50-omega]
gi|257795648|ref|ZP_05644627.1| DNA mismatch repair protein MutL [Staphylococcus aureus A9781]
gi|258416051|ref|ZP_05682319.1| DNA mismatch repair protein MutL [Staphylococcus aureus A9763]
gi|258421634|ref|ZP_05684558.1| DNA mismatch repair protein mutL [Staphylococcus aureus A9719]
gi|258434790|ref|ZP_05688864.1| DNA mismatch repair protein mutL [Staphylococcus aureus A9299]
gi|258444634|ref|ZP_05692963.1| DNA mismatch repair protein mutL [Staphylococcus aureus A8115]
gi|258447533|ref|ZP_05695677.1| DNA mismatch repair protein mutL [Staphylococcus aureus A6300]
gi|258449375|ref|ZP_05697478.1| DNA mismatch repair protein mutL [Staphylococcus aureus A6224]
gi|269202913|ref|YP_003282182.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
ED98]
gi|282892784|ref|ZP_06301019.1| DNA mismatch repair protein mutL [Staphylococcus aureus A8117]
gi|282927638|ref|ZP_06335254.1| DNA mismatch repair protein MutL [Staphylococcus aureus A10102]
gi|295406233|ref|ZP_06816040.1| DNA mismatch repair protein MutL [Staphylococcus aureus A8819]
gi|296274854|ref|ZP_06857361.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
MR1]
gi|297244461|ref|ZP_06928344.1| DNA mismatch repair protein mutL [Staphylococcus aureus A8796]
gi|387150439|ref|YP_005742003.1| DNA mismatch repair protein MutL [Staphylococcus aureus 04-02981]
gi|415691146|ref|ZP_11453385.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
CGS03]
gi|417650996|ref|ZP_12300759.1| DNA mismatch repair protein, C-terminal domain protein
[Staphylococcus aureus subsp. aureus 21172]
gi|418424437|ref|ZP_12997559.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp.
aureus VRS1]
gi|418427432|ref|ZP_13000444.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp.
aureus VRS2]
gi|418430272|ref|ZP_13003188.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp.
aureus VRS3a]
gi|418433238|ref|ZP_13006015.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp.
aureus VRS4]
gi|418436909|ref|ZP_13008711.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp.
aureus VRS5]
gi|418439783|ref|ZP_13011489.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp.
aureus VRS6]
gi|418442833|ref|ZP_13014435.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp.
aureus VRS7]
gi|418445893|ref|ZP_13017369.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp.
aureus VRS8]
gi|418448839|ref|ZP_13020230.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp.
aureus VRS9]
gi|418451660|ref|ZP_13022994.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp.
aureus VRS10]
gi|418454716|ref|ZP_13025978.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp.
aureus VRS11a]
gi|418457592|ref|ZP_13028795.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp.
aureus VRS11b]
gi|418569019|ref|ZP_13133359.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
21272]
gi|418638121|ref|ZP_13200424.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
IS-3]
gi|418878145|ref|ZP_13432380.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp.
aureus CIG1165]
gi|418880975|ref|ZP_13435194.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp.
aureus CIG1213]
gi|418883903|ref|ZP_13438098.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp.
aureus CIG1769]
gi|418886558|ref|ZP_13440706.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp.
aureus CIG1150]
gi|418894996|ref|ZP_13449091.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp.
aureus CIG1057]
gi|418914394|ref|ZP_13468366.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp.
aureus CIGC340D]
gi|418920375|ref|ZP_13474308.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp.
aureus CIGC348]
gi|418931367|ref|ZP_13485208.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp.
aureus CIG1750]
gi|418991160|ref|ZP_13538821.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp.
aureus CIG1096]
gi|419784923|ref|ZP_14310681.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
IS-M]
gi|424768018|ref|ZP_18195311.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
CM05]
gi|443636823|ref|ZP_21120916.1| DNA mismatch repair protein MutL [Staphylococcus aureus subsp.
aureus 21236]
gi|54037875|sp|P65492.1|MUTL_STAAN RecName: Full=DNA mismatch repair protein MutL
gi|54041516|sp|P65491.1|MUTL_STAAM RecName: Full=DNA mismatch repair protein MutL
gi|166232110|sp|A7X1T8.1|MUTL_STAA1 RecName: Full=DNA mismatch repair protein MutL
gi|189030417|sp|A6U1B5.1|MUTL_STAA2 RecName: Full=DNA mismatch repair protein MutL
gi|13701096|dbj|BAB42391.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
N315]
gi|14247067|dbj|BAB57459.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
Mu50]
gi|149946297|gb|ABR52233.1| DNA mismatch repair protein MutL [Staphylococcus aureus subsp.
aureus JH1]
gi|156721752|dbj|BAF78169.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
Mu3]
gi|172087905|emb|CAQ35188.1| DNA mismatch repair protein MutL [Staphylococcus aureus subsp.
aureus]
gi|172087911|emb|CAQ35191.1| DNA mismatch repair protein MutL [Staphylococcus aureus subsp.
aureus]
gi|172087915|emb|CAQ35193.1| DNA mismatch repair protein MutL [Staphylococcus aureus subsp.
aureus]
gi|172087919|emb|CAQ35195.1| DNA mismatch repair protein MutL [Staphylococcus aureus subsp.
aureus]
gi|172087921|emb|CAQ35196.1| DNA mismatch repair protein MutL [Staphylococcus aureus subsp.
aureus]
gi|257789620|gb|EEV27960.1| DNA mismatch repair protein MutL [Staphylococcus aureus A9781]
gi|257839199|gb|EEV63675.1| DNA mismatch repair protein MutL [Staphylococcus aureus A9763]
gi|257842320|gb|EEV66745.1| DNA mismatch repair protein mutL [Staphylococcus aureus A9719]
gi|257849151|gb|EEV73133.1| DNA mismatch repair protein mutL [Staphylococcus aureus A9299]
gi|257850127|gb|EEV74080.1| DNA mismatch repair protein mutL [Staphylococcus aureus A8115]
gi|257853724|gb|EEV76683.1| DNA mismatch repair protein mutL [Staphylococcus aureus A6300]
gi|257857363|gb|EEV80261.1| DNA mismatch repair protein mutL [Staphylococcus aureus A6224]
gi|262075203|gb|ACY11176.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
ED98]
gi|282590641|gb|EFB95718.1| DNA mismatch repair protein MutL [Staphylococcus aureus A10102]
gi|282764781|gb|EFC04906.1| DNA mismatch repair protein mutL [Staphylococcus aureus A8117]
gi|285816978|gb|ADC37465.1| DNA mismatch repair protein MutL [Staphylococcus aureus 04-02981]
gi|294968821|gb|EFG44843.1| DNA mismatch repair protein MutL [Staphylococcus aureus A8819]
gi|297178491|gb|EFH37737.1| DNA mismatch repair protein mutL [Staphylococcus aureus A8796]
gi|315131090|gb|EFT87074.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
CGS03]
gi|329727180|gb|EGG63636.1| DNA mismatch repair protein, C-terminal domain protein
[Staphylococcus aureus subsp. aureus 21172]
gi|371978204|gb|EHO95454.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
21272]
gi|375023345|gb|EHS16808.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
IS-3]
gi|377694267|gb|EHT18632.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp.
aureus CIG1165]
gi|377694802|gb|EHT19166.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp.
aureus CIG1057]
gi|377714649|gb|EHT38848.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp.
aureus CIG1750]
gi|377714990|gb|EHT39188.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp.
aureus CIG1769]
gi|377723282|gb|EHT47407.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp.
aureus CIG1096]
gi|377725511|gb|EHT49624.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp.
aureus CIG1150]
gi|377731868|gb|EHT55921.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp.
aureus CIG1213]
gi|377757896|gb|EHT81784.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp.
aureus CIGC340D]
gi|377765734|gb|EHT89583.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp.
aureus CIGC348]
gi|383363524|gb|EID40856.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
IS-M]
gi|387718667|gb|EIK06625.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp.
aureus VRS3a]
gi|387719019|gb|EIK06975.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp.
aureus VRS2]
gi|387720344|gb|EIK08256.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp.
aureus VRS1]
gi|387725678|gb|EIK13282.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp.
aureus VRS4]
gi|387728013|gb|EIK15513.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp.
aureus VRS5]
gi|387730612|gb|EIK17979.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp.
aureus VRS6]
gi|387735821|gb|EIK22931.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp.
aureus VRS8]
gi|387737498|gb|EIK24564.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp.
aureus VRS7]
gi|387737748|gb|EIK24808.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp.
aureus VRS9]
gi|387744541|gb|EIK31305.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp.
aureus VRS10]
gi|387745831|gb|EIK32581.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp.
aureus VRS11a]
gi|387747324|gb|EIK34033.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp.
aureus VRS11b]
gi|402348655|gb|EJU83634.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
CM05]
gi|408423481|emb|CCJ10892.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp.
aureus ST228]
gi|408425471|emb|CCJ12858.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp.
aureus ST228]
gi|408427459|emb|CCJ14822.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp.
aureus ST228]
gi|408429446|emb|CCJ26611.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp.
aureus ST228]
gi|408431434|emb|CCJ18749.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp.
aureus ST228]
gi|408433428|emb|CCJ20713.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp.
aureus ST228]
gi|408435419|emb|CCJ22679.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp.
aureus ST228]
gi|408437404|emb|CCJ24647.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp.
aureus ST228]
gi|443406800|gb|ELS65370.1| DNA mismatch repair protein MutL [Staphylococcus aureus subsp.
aureus 21236]
Length = 669
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 83/404 (20%), Positives = 175/404 (43%), Gaps = 53/404 (13%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K + E YH ++P +NIEM VDVNV P K ++ + E+ L + I ++
Sbjct: 265 KAILEGYHTLLTIGRFPICYINIEMDPILVDVNVHPTKLEVRLSKEEQLYQLIVSKIQEA 324
Query: 61 YAIGFTVDGNNM------NQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSH 114
+ + NN+ N+ + ++ E QR N+E + +T SE++++ S
Sbjct: 325 FKDRILIPKNNLDYVPKKNKVLYSFEQQKIEFE--QRQNTENNQEKTF--SSEESNSKSF 380
Query: 115 EANLQQSPETVEPDTPDETIE------VIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARY 168
A Q ++ D+ + + + DD + R+ +D+ +
Sbjct: 381 MAENQNDEIVIKEDSYNPFVTKTSESLITDDESSGYNNTRE-----------KDEDYFKK 429
Query: 169 ARRTVQAQDRCVENRFHANIDPSKNKEAES--ELNRVIK------KSMFEKMKIVGQFNL 220
+ +Q D+ ++ A++ +NK ++ ++N + K M+IVGQ +
Sbjct: 430 QQEILQEMDQTFDSNEDASVQNYENKASDDYYDVNDIKGTKSKDPKRRIPYMEIVGQVHG 489
Query: 221 GFIIVKYDSDLFIIDQHATDEKYNFETLQKT---TLIKSQKLVVPQNLHLTKINQCILKD 277
+II + + +++IDQHA E+ +E + + Q L++P H +K Q ++
Sbjct: 490 TYIIAQNEFGMYMIDQHAAQERIKYEYFRDKIGEVTNEVQDLLIPLTFHFSKDEQLVIDQ 549
Query: 278 NLPVFYKNGFE---FSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLF-MLQHTNSTEHC 333
YKN + + + +++S P+ ++++EE++ M++ +
Sbjct: 550 -----YKNELQQVGIMLEHFGGHDYIVSSYPV----WFPKDEVEEIIKDMIELILEEKKV 600
Query: 334 RPSRIRAMFA-SRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
++R A +C+KS+ L EM+ L+ + + P+
Sbjct: 601 DIKKLREDVAIMMSCKKSIKANHYLQKHEMSDLIDQLREAEDPF 644
>gi|448570137|ref|ZP_21639131.1| DNA mismatch repair protein MutL [Haloferax lucentense DSM 14919]
gi|445723438|gb|ELZ75080.1| DNA mismatch repair protein MutL [Haloferax lucentense DSM 14919]
Length = 563
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 197 ESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQ---KTTL 253
+S L V S+F+ ++++G+F +++ + D +L ++DQHA E+ N+E L+ ++
Sbjct: 355 DSSLAPVEAASVFDDLRVIGRFRGLYLLCEADDELLVVDQHAAHERINYERLREAVESAG 414
Query: 254 IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGF 287
I S + P + L+ + +L N + K GF
Sbjct: 415 IDSAAVDPPATVSLSPADAALLDANRDLVEKLGF 448
>gi|418161232|ref|ZP_12797923.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA17328]
gi|353830822|gb|EHE10951.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA17328]
Length = 649
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 154/368 (41%), Gaps = 41/368 (11%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMNQ 74
++P +++I + DVNV P K+++ + EK L+ V I +S Q
Sbjct: 280 RFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLK----------EQ 329
Query: 75 SMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPDETI 134
++ P + ++ K N E+VE +P+ ++N+ + E EP P +T
Sbjct: 330 TL--IPDALENLAKSTVRNREKVEQTILPL--KENTLYY---------EKTEPSRPSQT- 375
Query: 135 EVIDDMPRLQGSYRQSTPVTL-SLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKN 193
EV D L + T +LD + K +A R D+ H +D +
Sbjct: 376 EVADYQVELTDEGQDLTLFAKETLDRLTKPAKLHFAERKPANYDQLD----HPELDLASI 431
Query: 194 KEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL 253
+A +L R + S F +++ GQ + ++ + L+IIDQHA E+ +E +++
Sbjct: 432 DKAYDKLERE-EASSFPELEFFGQMHGTYLFAQGRDGLYIIDQHAAQERVKYEEYRESIG 490
Query: 254 ---IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNT 310
Q+L+VP + LK+ +P+ + G + + +L P+
Sbjct: 491 NVDQSQQQLLVPYIFEFPADDALRLKERMPLLEEVGVFLA--EYGENQFILREHPI---- 544
Query: 311 TLGREDIEELLF-MLQHTNSTEHCRPSRIRAMFA-SRACRKSVMIGRALSVGEMTGLVRN 368
+ E+IE ++ M T+ + RA A +C++S+ + L+
Sbjct: 545 WMAEEEIESGIYEMCDMLLLTKEVSIKKYRAELAIMMSCKRSIKANHRIDDHSARQLLYQ 604
Query: 369 MGRIDQPW 376
+ + D P+
Sbjct: 605 LSQCDNPY 612
>gi|320160707|ref|YP_004173931.1| DNA mismatch repair protein MutL [Anaerolinea thermophila UNI-1]
gi|319994560|dbj|BAJ63331.1| DNA mismatch repair protein MutL [Anaerolinea thermophila UNI-1]
Length = 586
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 81/175 (46%), Gaps = 8/175 (4%)
Query: 204 IKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETL--QKTTLIKSQKLVV 261
+ + +++VGQ + +++ + L++IDQHA E+ FE +K I +Q L+
Sbjct: 389 LPSGVLPLLRLVGQVAMAYLVAEGPDGLYLIDQHAAHERVLFERFIQKKGEGIPAQALLE 448
Query: 262 PQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELL 321
P +HL+ +L+D + + GF + ++++P + G + ++ +
Sbjct: 449 PALVHLSPSQARLLEDEVDTLNRLGFH--IEPFGPSTFRVSAIPALLS---GADPVQAVR 503
Query: 322 FMLQHTNSTEHCRPSRIRAMFASRAC-RKSVMIGRALSVGEMTGLVRNMGRIDQP 375
+++ E S + A +R C R +V G+ LS E L+R++ P
Sbjct: 504 AVVEDFEEDETPLQSEVEARLIARICKRTAVKAGQVLSPEEQRALLRDLEACQSP 558
>gi|254516807|ref|ZP_05128865.1| DNA mismatch repair protein MutL [gamma proteobacterium NOR5-3]
gi|219674312|gb|EED30680.1| DNA mismatch repair protein MutL [gamma proteobacterium NOR5-3]
Length = 624
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 83/163 (50%), Gaps = 16/163 (9%)
Query: 215 VGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTT---LIKSQKLVVPQNLHLTKIN 271
+ Q + +I+ + L ++D HA E+ +E L++ I+SQ L+VPQ++ ++
Sbjct: 438 LAQLHGVYILAQNREGLVLVDMHAAHERITYERLKQARDEQGIRSQPLLVPQSVSVSSRE 497
Query: 272 QCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLF-----MLQH 326
+L+++ +F G D + + ++++ +P+S L ++EELL +L++
Sbjct: 498 ALLLEEHASLFQSLGLRV--DIAGEESLIIREIPVS----LQGANVEELLRDVLADLLEY 551
Query: 327 TNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
S R + ++ AC SV R L+V EM L+R+M
Sbjct: 552 GTSERIARHED--ELLSTMACHGSVRANRRLTVPEMNALLRDM 592
>gi|167754511|ref|ZP_02426638.1| hypothetical protein CLORAM_00012 [Clostridium ramosum DSM 1402]
gi|167705343|gb|EDS19922.1| DNA mismatch repair domain protein [Clostridium ramosum DSM 1402]
Length = 613
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 81/381 (21%), Positives = 161/381 (42%), Gaps = 67/381 (17%)
Query: 4 VNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYA 62
+N Y ++ + +YP I+NIE+ VDVNV P K ++ E L + ++D+ A
Sbjct: 269 INNAYRRYLADKRYPIAIVNIEIDPYLVDVNVHPSKLEVRFSKESQLRELIYQGVSDALA 328
Query: 63 -IGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQS 121
+ T D + + + +++E+ S ++ +E++P+ + + F
Sbjct: 329 KVNLTYDAT----AEYKKTKAPLNLEQ----PSLDLTYESVPIKTIEQPRF--------- 371
Query: 122 PETVEPDTPDETIEVIDDMPRLQGSYRQSTPVT--LSLDIIQDQLKARYARRTVQAQDRC 179
E D P EV+ S+ T V S II DQ +
Sbjct: 372 ----EADFPQNDQEVVFK----DASFDDFTFVKEETSEYIIPDQ--------------QI 409
Query: 180 VENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHAT 239
+E + ++P + +++KK +F K GQ + +II + ++ ++I+DQHA
Sbjct: 410 IETK----VEPRE---------KLMKKKLFVK----GQVHGTYIICEDETGMYIVDQHAG 452
Query: 240 DEKYNFETL---QKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDD 296
E+ N+E + + + L+VP L I+++ + K G + + +
Sbjct: 453 QERINYEYFLEKYQNLDLSMRDLLVPITLEYPLSEFLIIEERKDLLTKVG--INLEVFGN 510
Query: 297 GNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRA 356
++ LP+ + IE+++ L + N + + A+ +C+ S+
Sbjct: 511 SGYVIKQLPLWMQNIDEQVFIEDMMMQLLNDNKIDVIKLQ--DHAIATLSCKASLKANTH 568
Query: 357 LSVGEMTGLVRNMGRIDQPWV 377
LS M ++ N+ R D P+V
Sbjct: 569 LSTEGMQNIIDNLMRCDNPYV 589
>gi|88704498|ref|ZP_01102212.1| DNA mismatch repair protein mutL [Congregibacter litoralis KT71]
gi|88701549|gb|EAQ98654.1| DNA mismatch repair protein mutL [Congregibacter litoralis KT71]
Length = 629
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 84/163 (51%), Gaps = 16/163 (9%)
Query: 215 VGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTT---LIKSQKLVVPQNLHLTKIN 271
+ Q + +I+ + + ++D HA E+ +E L++ I+SQ L+VPQ++ ++
Sbjct: 443 LAQLHGIYILAQNREGMVLVDTHAAHERITYERLKQARDEQGIRSQPLLVPQSVSVSSRE 502
Query: 272 QCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLF-----MLQH 326
+++++ +F G D + + ++L+ +P+S L D+E+LL +L++
Sbjct: 503 AILVEEHAALFESLGLRV--DVAGEESLLIREIPVS----LQGADVEQLLRDVLADLLEY 556
Query: 327 TNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
+S R + ++ AC SV R L+V EM L+R+M
Sbjct: 557 GSSERIARHED--ELLSTMACHGSVRANRRLTVPEMNALLRDM 597
>gi|419439426|ref|ZP_13979483.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA40410]
gi|379581911|gb|EHZ46794.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA40410]
Length = 649
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 154/368 (41%), Gaps = 41/368 (11%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMNQ 74
++P +++I + DVNV P K+++ + EK L+ V I +S Q
Sbjct: 280 RFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLK----------EQ 329
Query: 75 SMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPDETI 134
++ P + ++ K N E+VE +P+ ++N+ + E EP P +T
Sbjct: 330 TL--IPDALENLAKSTVRNREKVEQTILPL--KENTLYY---------EKTEPSRPSQT- 375
Query: 135 EVIDDMPRLQGSYRQSTPVTL-SLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKN 193
EV D L + T +LD + K +A R D+ H +D +
Sbjct: 376 EVADYQVELTDEGQDLTLFAKETLDRLTKPAKLHFAERKPANYDQLD----HPELDLASI 431
Query: 194 KEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL 253
+A +L R + S F +++ GQ + ++ + L+IIDQHA E+ +E +++
Sbjct: 432 DKAYDKLERE-EASSFPELEFFGQMHGTYLFAQGRDGLYIIDQHAAQERVKYEEYRESIG 490
Query: 254 ---IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNT 310
Q+L+VP + LK+ +P+ + G + + +L P+
Sbjct: 491 NVDQSQQQLLVPYIFEFPADDALRLKERMPLLEEVGVFLA--EYGENQFILREHPI---- 544
Query: 311 TLGREDIEELLF-MLQHTNSTEHCRPSRIRAMFA-SRACRKSVMIGRALSVGEMTGLVRN 368
+ E+IE ++ M T+ + RA A +C++S+ + L+
Sbjct: 545 WMAEEEIESGIYEMCDMLILTKKVSIKKYRAELAIMMSCKRSIKANHRIDDHSARQLLYQ 604
Query: 369 MGRIDQPW 376
+ + D P+
Sbjct: 605 LSQCDNPY 612
>gi|422341632|ref|ZP_16422573.1| DNA mismatch repair protein [Treponema denticola F0402]
gi|325474471|gb|EGC77658.1| DNA mismatch repair protein [Treponema denticola F0402]
Length = 606
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 147/337 (43%), Gaps = 64/337 (18%)
Query: 11 FNNHQYP--FIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVD 68
F N +P F+ LN++ R VD N+ P KR+ + K + ++ I+ Y D
Sbjct: 274 FPNGGFPAAFVFLNVDPER--VDFNIHPAKREAKFEDYKEIHHSLSSTISSFYKQKTVSD 331
Query: 69 GNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPD 128
+ +S + + + D EK E+E ++ + N + + ++ +
Sbjct: 332 --LLKESYQPEYTRGFDFEK--------TEYEA--------ADLNQSYNPAGTKKYLQSN 373
Query: 129 TPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANI 188
T D YRQ++ T Q++A A + V A ++R A
Sbjct: 374 TFD---------------YRQNSTKTYWPSSPIKQIEASTAFQEVSA----AQHRLSAAA 414
Query: 189 DPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETL 248
+ S L + + KS F K +GQF FI V+ ++ L+IIDQHA E+ FE L
Sbjct: 415 YET------SALPQDLPKSDF---KFLGQFCGTFIAVEKNNALYIIDQHAAHERILFEGL 465
Query: 249 QKTTLIKSQKLVVPQNLHL-TKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMS 307
+K +L SQ+L++P + ++ + I++ NL K GF S D G ++ ++P+
Sbjct: 466 KK-SLGPSQELLIPYRIETESEKDDEIIRLNLHELQKAGFNISEDKK--GLWIIRAVPIR 522
Query: 308 KNTTLGREDIEELLF--------MLQHTNSTEHCRPS 336
T +D++E L ++ H + CR +
Sbjct: 523 WQGT--EKDLKEDLAGAGKDPSGLMHHILARSACRAA 557
>gi|168493871|ref|ZP_02718014.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae
CDC3059-06]
gi|169833770|ref|YP_001693695.1| DNA mismatch repair protein [Streptococcus pneumoniae Hungary19A-6]
gi|418077725|ref|ZP_12714949.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
4027-06]
gi|418079884|ref|ZP_12717100.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
6735-05]
gi|418088589|ref|ZP_12725750.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA43265]
gi|418097598|ref|ZP_12734700.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
6901-05]
gi|418113777|ref|ZP_12750770.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
5787-06]
gi|418115944|ref|ZP_12752921.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
6963-05]
gi|418133909|ref|ZP_12770769.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA11426]
gi|419492337|ref|ZP_14032065.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47210]
gi|421288835|ref|ZP_15739587.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA54354]
gi|421304151|ref|ZP_15754809.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA62331]
gi|238688359|sp|B1I8F2.1|MUTL_STRPI RecName: Full=DNA mismatch repair protein MutL
gi|168996272|gb|ACA36884.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae
Hungary19A-6]
gi|183576093|gb|EDT96621.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae
CDC3059-06]
gi|353748747|gb|EHD29398.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
4027-06]
gi|353754203|gb|EHD34816.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
6735-05]
gi|353764330|gb|EHD44879.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA43265]
gi|353771754|gb|EHD52261.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
6901-05]
gi|353788441|gb|EHD68838.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
5787-06]
gi|353791582|gb|EHD71956.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
6963-05]
gi|353903896|gb|EHE79410.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA11426]
gi|379596034|gb|EHZ60839.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47210]
gi|395890095|gb|EJH01101.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA54354]
gi|395906542|gb|EJH17440.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA62331]
Length = 649
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 154/368 (41%), Gaps = 41/368 (11%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMNQ 74
++P +++I + DVNV P K+++ + EK L+ V I +S Q
Sbjct: 280 RFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLK----------EQ 329
Query: 75 SMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPDETI 134
++ P + ++ K N E+VE +P+ ++N+ + E EP P +T
Sbjct: 330 TL--IPDALENLAKSTVRNREKVEQTILPL--KENTLYY---------EKTEPSRPSQT- 375
Query: 135 EVIDDMPRLQGSYRQSTPVTL-SLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKN 193
EV D L + T +LD + K +A R D+ H +D +
Sbjct: 376 EVADYQVELTDEGQDLTLFAKETLDRLTKPAKLHFAERKPANYDQLD----HPELDLASI 431
Query: 194 KEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL 253
+A +L R + S F +++ GQ + ++ + L+IIDQHA E+ +E +++
Sbjct: 432 DKAYDKLERE-EASSFPELEFFGQMHGTYLFAQGRDGLYIIDQHAAQERVKYEEYRESIG 490
Query: 254 ---IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNT 310
Q+L+VP + LK+ +P+ + G + + +L P+
Sbjct: 491 NVDQSQQQLLVPYIFEFPADDALRLKERMPLLEEVGVFLA--EYGENQFILREHPI---- 544
Query: 311 TLGREDIEELLF-MLQHTNSTEHCRPSRIRAMFA-SRACRKSVMIGRALSVGEMTGLVRN 368
+ E+IE ++ M T+ + RA A +C++S+ + L+
Sbjct: 545 WMAEEEIESGIYEMCDMLLLTKKVSIKKYRAELAIMMSCKRSIKANHRIDDHSARQLLYQ 604
Query: 369 MGRIDQPW 376
+ + D P+
Sbjct: 605 LSQCDNPY 612
>gi|399923770|ref|ZP_10781128.1| DNA mismatch repair protein [Peptoniphilus rhinitidis 1-13]
Length = 624
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 82/169 (48%), Gaps = 10/169 (5%)
Query: 213 KIVGQFNLGFIIV--KYDSDLFIIDQHATDEKYNFETLQKTTL---IKSQKLVVPQNLHL 267
KIVG +I++ K DS +I+DQHA E+ N+E L I SQ L+ P+ + L
Sbjct: 437 KIVGILFKTYILLENKRDSICYIVDQHAAHERVNYEKFLNMYLNSDIASQILIKPEIIEL 496
Query: 268 TKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHT 327
++ +++ L +F K GF+ + D ++L +PM I +++ L
Sbjct: 497 NQVEYDKIENYLDLFVKLGFK--IEDFGDNTIVLREVPMIFGLPTYVNFIRDIIDSLDKD 554
Query: 328 NSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
S+ + + M +AC+ SV G LS E+ L+R++ + P+
Sbjct: 555 ISSNY-EADLYKIM--KKACKASVKAGDDLSDMEVEALIRDLKNCENPY 600
>gi|58039705|ref|YP_191669.1| DNA mismatch repair protein MutL [Gluconobacter oxydans 621H]
gi|58002119|gb|AAW61013.1| DNA mismatch repair protein MutL [Gluconobacter oxydans 621H]
Length = 619
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 73/168 (43%), Gaps = 26/168 (15%)
Query: 218 FNLGFIIVKYDSDLFIIDQHATDEKYNFETLQK----TTLIKSQKLVVPQNLHLTKINQC 273
F+ + + D DL ++DQHA E+ E L++ ++SQ L++P+ + L +
Sbjct: 430 FDTYILALAPDGDLVLVDQHAAHERLTHERLREQYANGGTLRSQALLLPEVVDLPRREAE 489
Query: 274 ILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELL------------ 321
L K G + +S G+VLL S+P LG +DI+ LL
Sbjct: 490 ALMARAEDLSKLGID--LESFGPGSVLLRSVP----ALLGAQDIQGLLKDIADELASDPD 543
Query: 322 FMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
T S H + A+ A AC S+ GR L EM L+R M
Sbjct: 544 LDAASTGSFSH----HLDAILARMACHGSIRAGRRLKPEEMDALLREM 587
>gi|262196403|ref|YP_003267612.1| DNA mismatch repair protein MutL [Haliangium ochraceum DSM 14365]
gi|262079750|gb|ACY15719.1| DNA mismatch repair protein MutL [Haliangium ochraceum DSM 14365]
Length = 762
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 8/170 (4%)
Query: 208 MFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQ---KTTLIKSQKLVVPQN 264
F ++ +GQ + +++ + + ++ ++DQHA E+ F+ L+ + Q+L++P+
Sbjct: 571 FFTELSYIGQLDRTYLVCESNGEMVLVDQHAAHERVAFQRLRDRWAQHAVPVQRLLLPKT 630
Query: 265 LHLTKINQCILKDNLPVFYKNGFEFS-FDSSDDGNVLLTSLPMSKNTTLGREDIEELLFM 323
L+ + +D + GFE F + L +LP + + ELL
Sbjct: 631 FDLSPEQAAVAEDARATLHDMGFELEHFGGT---TYALKALPAGLRESDVETVLHELLDD 687
Query: 324 LQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRID 373
L + R+ A+ AC V G ALS E+ L +++ +D
Sbjct: 688 LAERGGSRALE-ERLDLALATIACHSVVRAGDALSAQEVRALFKSLDEVD 736
>gi|329895360|ref|ZP_08270985.1| DNA mismatch repair protein MutL [gamma proteobacterium IMCC3088]
gi|328922373|gb|EGG29717.1| DNA mismatch repair protein MutL [gamma proteobacterium IMCC3088]
Length = 606
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 83/155 (53%), Gaps = 14/155 (9%)
Query: 222 FIIVKYDSDLFIIDQHATDEKYNFETLQKTTL---IKSQKLVVPQNLHLTKINQCILKDN 278
+I+ + L ++D HA E+ +E L++ ++SQ L+VPQ + +++ + +++
Sbjct: 427 YILSENAQGLVLVDMHAAHERITYERLKEADASEGVRSQPLLVPQAIAVSQKEVELAREH 486
Query: 279 LPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRI 338
VF G + + + ++L+ S+P T L D+E+L+ + ++ E+ + RI
Sbjct: 487 EAVFV--GLGLQLEPASEESLLIRSVP----TLLRSADMEQLVRDVL-SDLAEYGQSDRI 539
Query: 339 ----RAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
A+ ++ AC SV R+L++ EM L+R++
Sbjct: 540 AAEREAILSTMACHGSVRANRSLTIPEMNALLRDI 574
>gi|456012633|gb|EMF46321.1| DNA mismatch repair protein MutL [Planococcus halocryophilus Or1]
Length = 605
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 82/172 (47%), Gaps = 8/172 (4%)
Query: 209 FEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETL-QKTTLIKS---QKLVVPQN 264
F ++++VGQ + +I+ + + ++IDQHA E+ +E +K I S Q L++P
Sbjct: 412 FPELEVVGQIHGTYIVAQSNDGFYLIDQHAAQERIKYEYFREKVGDIDSNERQALLLPLT 471
Query: 265 LHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFML 324
H ++ LKD+LP+ +G + D + ++ P +E IE+L+ +
Sbjct: 472 FHYSRDEALRLKDHLPILSDSG--VFLEEFGDTSFIVREYPTWFPKGFEQEVIEDLIEQI 529
Query: 325 QHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+ + A+ S C++S+ L EM L+ ++ + +QP+
Sbjct: 530 LTERKVDVKKLREDAAIMMS--CKRSIKANHFLQKHEMERLLVDLKKAEQPF 579
>gi|294496663|ref|YP_003543156.1| DNA mismatch repair protein MutL [Methanohalophilus mahii DSM 5219]
gi|292667662|gb|ADE37511.1| DNA mismatch repair protein MutL [Methanohalophilus mahii DSM 5219]
Length = 597
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 81/172 (47%), Gaps = 19/172 (11%)
Query: 213 KIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQ 272
+I+GQ N +I+ + D L +IDQHA E+ +E L + Q+L+ P + LT +
Sbjct: 411 RILGQVNDLYIVAETDEGLLLIDQHAAHERIMYEQLSRRVKHDWQELISPVTVDLTTREK 470
Query: 273 CILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGR-ED---IEELLFMLQHTN 328
+L++ +P Y FS ++T++P T +G+ ED + +LL L
Sbjct: 471 VLLEEYIP--YLENLGFSLSEFGTQTYVITTVP----TVMGKIEDPSVVHDLLADL---- 520
Query: 329 STEHCRPSRIRAM----FASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
E R + M + ACR ++ G ++ +M L+ + + + P+
Sbjct: 521 -FEQGRVKEKKGMEDMLCKTMACRSAIKAGAPCNMEQMQNLLDQLEKTENPY 571
>gi|254557088|ref|YP_003063505.1| DNA mismatch repair protein [Lactobacillus plantarum JDM1]
gi|254046015|gb|ACT62808.1| DNA mismatch repair protein [Lactobacillus plantarum JDM1]
Length = 678
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 122/296 (41%), Gaps = 31/296 (10%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYA------IGFTVD 68
+YP ++ + M VDVNV P K+++ + E L V ITD T
Sbjct: 278 RYPIAVIALTMDPLLVDVNVHPTKQEVRLSKEPELAKLVSTTITDRLVDVNLIPSALTNL 337
Query: 69 GNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPD 128
G++ + + D + M+ S+ +V +T P +E + A +Q S T
Sbjct: 338 GSHRREHLNTD---QLAMDLNAVSSQYQVADKTTPASTEQFAASLAAATMQPSSATTMVS 394
Query: 129 TPDETIEVIDD------MPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVEN 182
T ++ +P + + P+ +S +D+L A VQA D+ ++
Sbjct: 395 TTSAQPSAVNRAAVSAVVPSESAASSANQPIMISH---RDELTAT----PVQAFDQRYQS 447
Query: 183 R-----FHANIDPSKNKEAES-ELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQ 236
F +P + A S + F +++ +GQ + +++ + D ++I+DQ
Sbjct: 448 ESGALPFGETAEPLETSTAASVPTSEAPDTERFPQLRYLGQMHGTYLLAEADDGMYILDQ 507
Query: 237 HATDEKYNFETLQKT---TLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEF 289
HA E+ N+E ++ Q L+VP L + +K+ LP+ + G
Sbjct: 508 HAAQERINYEYYRQAIGEVSADQQNLLVPIILDYPTSDVLKIKEKLPLLAELGIHL 563
>gi|433480049|ref|ZP_20437336.1| DNA mismatch repair protein mutL [Neisseria meningitidis 63041]
gi|432215009|gb|ELK70900.1| DNA mismatch repair protein mutL [Neisseria meningitidis 63041]
Length = 670
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 96/401 (23%), Positives = 170/401 (42%), Gaps = 70/401 (17%)
Query: 1 MKLVNEVYHQ-FNNHQYPFIILNIEMSRDSVDVNVTPDKRQI-FMDHEK---LLLATVKV 55
+ V + Y +N P +L +++ ++VDVNV P K +I F D + L+ T+
Sbjct: 276 LHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSRQVHQLVFHTLNK 335
Query: 56 HITDSYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETI-----PVPSEDNS 110
+ D+ A ++ +S+ SN+ EV H+ P+PSE++S
Sbjct: 336 ALADTRA--------DLTESV---------------SNAGEVLHDITGVTPAPMPSENDS 372
Query: 111 -NFSHEANLQQSPETVEPDTPDETIEVIDDMPR-LQGSYRQSTPVTLSLDIIQDQLKAR- 167
N + A+ P +PDT + P Q +Y P SL + + +
Sbjct: 373 ENLFNRAS--DYPTGNKPDTRNAFGSSGKTAPMPYQSAY---APQQRSLSLRESRAAMNT 427
Query: 168 YARRTVQAQDRCVE------NRFHANIDPSKNKEAESEL---NRVIKKSMFEKMKIVGQF 218
YA + D +E RF N+ PS+ +++ + + +S +
Sbjct: 428 YAELYKKTDDIDLELSQFEQARF-GNM-PSETPAPKTDTPLSDGIPSQSELPPLGFAIAQ 485
Query: 219 NLG-FIIVKYDSDLFIIDQHATDEKYNFETL----QKTTLIKSQKLVVPQNLHLTKINQC 273
LG +I+ + + L +ID HA E+ N+E + Q+ ++SQ+L++P +
Sbjct: 486 LLGIYILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGRLQSQRLLIPITFAASHEECA 545
Query: 274 ILKDNLPVFYKNGFEFSFDSSDDGNVL-LTSLPMSKNTTLGREDI----EELLFMLQHTN 328
L D G E S GN L + ++P T LG+ D+ ++L L
Sbjct: 546 ALADYAETLAGFGLEL---SDMGGNTLAVRAVP----TMLGKADVVSLARDVLGELAQVG 598
Query: 329 STEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
S++ + A+ +C SV GR L++ EM L+R+M
Sbjct: 599 SSQTIEEHE-NHILATMSCHGSVRAGRQLTLPEMNALLRDM 638
>gi|254448141|ref|ZP_05061604.1| 2-polyprenylphenol 6-hydroxylase [gamma proteobacterium HTCC5015]
gi|198262267|gb|EDY86549.1| 2-polyprenylphenol 6-hydroxylase [gamma proteobacterium HTCC5015]
Length = 615
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 80/162 (49%), Gaps = 14/162 (8%)
Query: 215 VGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKT---TLIKSQKLVVPQNLHLTKIN 271
+ Q + +++ + S L I+D HA E+ +E L+ I++Q L+VP ++++++
Sbjct: 429 LAQLHGLYVLAQNQSGLIIVDTHAAHERVTYEKLKAAYEQQGIQTQPLLVPVSINVSEAE 488
Query: 272 QCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTE 331
+ +++ F K GFE S + + + + +P+ N + ++L ++ T
Sbjct: 489 ADMAEEHAAEFLKLGFELSRSAPE--ALRIRQVPVLLNQADAEALVRDVL-----SDLTA 541
Query: 332 HCRPSRIR----AMFASRACRKSVMIGRALSVGEMTGLVRNM 369
H RIR + ++ AC SV R L++ EM L+R M
Sbjct: 542 HGHSERIREALNEVLSTMACHGSVRANRLLTLPEMNALLREM 583
>gi|333374997|ref|ZP_08466826.1| DNA mismatch repair protein MutL [Kingella kingae ATCC 23330]
gi|381400681|ref|ZP_09925604.1| DNA mismatch repair protein [Kingella kingae PYKK081]
gi|332973074|gb|EGK11011.1| DNA mismatch repair protein MutL [Kingella kingae ATCC 23330]
gi|380834317|gb|EIC14162.1| DNA mismatch repair protein [Kingella kingae PYKK081]
Length = 624
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 84/177 (47%), Gaps = 27/177 (15%)
Query: 222 FIIVKYDSDLFIIDQHATDEKYNFETLQKT---TLIKSQKLVVPQNLHLTKINQCILKDN 278
+I+ + + L ++D HA E+ N+E L+ I++Q L++P T Q + +
Sbjct: 445 YILAQTEDGLILVDMHAAAERINYEKLKTAHHANGIQAQMLLIPVVFAATHAEQAAVDE- 503
Query: 279 LPVFYKNGFEFSFD--SSDDGNVLLTSLP--MSKN--TTLGREDIEELLFMLQHTNSTEH 332
F + E+ D +++ G + + ++P +SK+ TL RE + +L+ Q +
Sbjct: 504 ---FSHSLREYGLDLVNAETGKIAVRTVPNMLSKSDVATLAREVLRDLMATGQSPTVRD- 559
Query: 333 CRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQP---------WVSMG 380
R + ++ AC SV GR L++ EM L+R+M + + WV +G
Sbjct: 560 ----RENEILSTMACHGSVRAGRQLTLPEMNALLRDMEQFPRSNQCNHGRPTWVKIG 612
>gi|450100397|ref|ZP_21858753.1| DNA mismatch repair protein [Streptococcus mutans SF1]
gi|450171966|ref|ZP_21884322.1| DNA mismatch repair protein [Streptococcus mutans SM4]
gi|449220470|gb|EMC20340.1| DNA mismatch repair protein [Streptococcus mutans SF1]
gi|449243283|gb|EMC41728.1| DNA mismatch repair protein [Streptococcus mutans SM4]
Length = 651
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 108/238 (45%), Gaps = 38/238 (15%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMNQ 74
++P +++I++ DVNV P K+++ + EK L+ + I DS +
Sbjct: 280 RFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMNLISSAIADSL------------R 327
Query: 75 SMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPDETI 134
E P + ++ K + ++ E +P+ + N + N ET + E
Sbjct: 328 EQELIPDALENLAKTSTNKKQKFEQTQLPL-KQSNLYYDKTQNDFFLKETTVSEASSE-F 385
Query: 135 EVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKNK 194
V+D ++ +T D + +YA+R Q R EN+ H ++ + NK
Sbjct: 386 TVVD----------KAVNIT---DNVSGHSSVKYAQR----QMRTCENKEHPSLTMT-NK 427
Query: 195 EAESELNRVIK------KSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFE 246
+ + +L+R+++ KS F +++ GQ + ++ + + L+IIDQHA E+ +E
Sbjct: 428 QQKRQLSRIVESLENEEKSTFPELEYFGQMHGTYLFAQGEGGLYIIDQHAAQERVKYE 485
>gi|450120896|ref|ZP_21865983.1| DNA mismatch repair protein [Streptococcus mutans ST6]
gi|449229790|gb|EMC29085.1| DNA mismatch repair protein [Streptococcus mutans ST6]
Length = 651
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 108/238 (45%), Gaps = 38/238 (15%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMNQ 74
++P +++I++ DVNV P K+++ + EK L+ + I DS +
Sbjct: 280 RFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMNLISSAIADSL------------R 327
Query: 75 SMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPDETI 134
E P + ++ K + ++ E +P+ + N + N ET + E
Sbjct: 328 EQELIPDALENLAKTSTNKKQKFEQTQLPL-KQSNLYYDKTQNDFFLKETTVSEASSE-F 385
Query: 135 EVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKNK 194
V+D ++ +T D + +YA+R Q R EN+ H ++ + NK
Sbjct: 386 TVVD----------KAVNIT---DNVSGHSSVKYAQR----QMRTCENKEHPSLTMT-NK 427
Query: 195 EAESELNRVIK------KSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFE 246
+ + +L+R+++ KS F +++ GQ + ++ + + L+IIDQHA E+ +E
Sbjct: 428 QQKRQLSRIVESLENEEKSTFPELEYFGQMHGTYLFAQGEGGLYIIDQHAAQERVKYE 485
>gi|449876161|ref|ZP_21782635.1| DNA mismatch repair protein [Streptococcus mutans S1B]
gi|450005600|ref|ZP_21826761.1| DNA mismatch repair protein [Streptococcus mutans NMT4863]
gi|450088209|ref|ZP_21854688.1| DNA mismatch repair protein [Streptococcus mutans NV1996]
gi|449188391|gb|EMB90103.1| DNA mismatch repair protein [Streptococcus mutans NMT4863]
gi|449216758|gb|EMC16850.1| DNA mismatch repair protein [Streptococcus mutans NV1996]
gi|449252969|gb|EMC50936.1| DNA mismatch repair protein [Streptococcus mutans S1B]
Length = 651
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 108/238 (45%), Gaps = 38/238 (15%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMNQ 74
++P +++I++ DVNV P K+++ + EK L+ + I DS +
Sbjct: 280 RFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMNLISSAIADSL------------R 327
Query: 75 SMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPDETI 134
E P + ++ K + ++ E +P+ + N + N ET + E
Sbjct: 328 EQELIPDALENLAKTSTNKKQKFEQTQLPL-KQSNLYYDKTQNDFFLKETTVSEASSE-F 385
Query: 135 EVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKNK 194
V+D ++ +T D + +YA+R Q R EN+ H ++ + NK
Sbjct: 386 TVVD----------KAVNIT---DNVSGHSSVKYAQR----QMRTCENKEHPSLTMT-NK 427
Query: 195 EAESELNRVIK------KSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFE 246
+ + +L+R+++ KS F +++ GQ + ++ + + L+IIDQHA E+ +E
Sbjct: 428 QQKRQLSRIVESLENEEKSTFPELEYFGQMHGTYLFAQGEGGLYIIDQHAAQERVKYE 485
>gi|329120521|ref|ZP_08249185.1| DNA mismatch repair protein MutL [Neisseria bacilliformis ATCC
BAA-1200]
gi|327461260|gb|EGF07592.1| DNA mismatch repair protein MutL [Neisseria bacilliformis ATCC
BAA-1200]
Length = 699
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 75/157 (47%), Gaps = 17/157 (10%)
Query: 222 FIIVKYDSDLFIIDQHATDEKYNFETLQK----TTLIKSQKLVVPQNLHLTKINQCILKD 277
+I+ + + L +ID HA E+ N+E +++ + SQ L++P ++ L +
Sbjct: 519 YILAQAEDSLLLIDMHAAAERVNYEKMKRQRDTQGRLNSQSLLIPVTFAASREETAALAE 578
Query: 278 NLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLF-MLQHTNSTEHCRPS 336
+ G + S + + + + ++P LG DIE L ML+ + EH
Sbjct: 579 HADSLRAYGLDLS--AVGENRIAVRAVPQ----MLGTSDIESLARDMLR--DFAEHGASQ 630
Query: 337 RIRA----MFASRACRKSVMIGRALSVGEMTGLVRNM 369
+I A + A+ +C SV GR L++ EM L+R+M
Sbjct: 631 QIEARENRLLATMSCHGSVRAGRRLTLPEMNALLRDM 667
>gi|387787013|ref|YP_006252109.1| DNA mismatch repair protein [Streptococcus mutans LJ23]
gi|379133414|dbj|BAL70166.1| DNA mismatch repair protein [Streptococcus mutans LJ23]
Length = 651
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 108/238 (45%), Gaps = 38/238 (15%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMNQ 74
++P +++I++ DVNV P K+++ + EK L+ + I DS +
Sbjct: 280 RFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMNLISSAIADSL------------R 327
Query: 75 SMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPDETI 134
E P + ++ K + ++ E +P+ + N + N ET + E
Sbjct: 328 EQELIPDALENLAKTSTNKKQKFEQTQLPL-KQSNLYYDKTQNDFFLKETTVSEASSE-F 385
Query: 135 EVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKNK 194
V+D ++ +T D + +YA+R Q R EN+ H ++ + NK
Sbjct: 386 TVVD----------KAVNIT---DNVSGHSSVKYAQR----QMRTCENKEHPSLTMT-NK 427
Query: 195 EAESELNRVIK------KSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFE 246
+ + +L+R+++ KS F +++ GQ + ++ + + L+IIDQHA E+ +E
Sbjct: 428 QQKRQLSRIVESLENEEKSTFPELEYFGQMHGTYLFAQGEGGLYIIDQHAAQERVKYE 485
>gi|302389748|ref|YP_003825569.1| DNA mismatch repair protein MutL [Thermosediminibacter oceani DSM
16646]
gi|302200376|gb|ADL07946.1| DNA mismatch repair protein MutL [Thermosediminibacter oceani DSM
16646]
Length = 593
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 124/281 (44%), Gaps = 23/281 (8%)
Query: 105 PSEDNSNFSHEANLQQS-PETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQ 163
P++ F E + Q+ ETV+ T+ +D+P + ++ + P + ++
Sbjct: 301 PAKIEIRFQRENEVHQALYETVKEGLFSNTLVPKEDLPIPKTTFPK--PKNYDGAVNENF 358
Query: 164 LKARYARRTVQAQDRCVENR--FHANIDPSKNKE-AESELNRVIKKSMFEKMKIVGQFNL 220
LK Y RT +EN+ F PS+ K+ + + K +I+GQ
Sbjct: 359 LKEEYFTRTSGK----IENKPVFTETAVPSETKKHSAPNIKEEKKAPEIYFSRILGQLFE 414
Query: 221 GFIIVKYDSDLFIIDQHATDEK--YNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDN 278
+I+V+ + + +++DQHA E+ Y + + + SQ+LV P L LT +++N
Sbjct: 415 TYIVVQGNGEFYLVDQHAAHERILYEYYSCGMDLPVISQELVSPFILKLTFEEINFIEEN 474
Query: 279 LPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRI 338
+ GF+ D VL+ S+P N + ++E++ L+ R+
Sbjct: 475 RDFIKRMGFDIEVFGKD--TVLIRSVPYFFNKPVEPASLQEIMDELKENGEF------RL 526
Query: 339 RA---MFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
R+ + AS AC ++ G LS EM L+ + R P+
Sbjct: 527 RSREKILASMACHTAIKAGDTLSPDEMRELLDQLMRTQNPY 567
>gi|168492131|ref|ZP_02716274.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae
CDC0288-04]
gi|418192878|ref|ZP_12829374.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47439]
gi|183573591|gb|EDT94119.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae
CDC0288-04]
gi|353861025|gb|EHE40964.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47439]
Length = 649
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 79/368 (21%), Positives = 154/368 (41%), Gaps = 41/368 (11%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMNQ 74
++P +++I + DVNV P K+++ + EK L+ V I +S Q
Sbjct: 280 RFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLK----------EQ 329
Query: 75 SMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPDETI 134
++ P + ++ K N E+VE +P+ ++N+ + E EP P +T
Sbjct: 330 TL--IPDALENLAKSTVRNREKVEQTILPL--KENTLYY---------EKTEPSRPSQT- 375
Query: 135 EVIDDMPRLQGSYRQSTPVTL-SLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKN 193
EV D L + T +LD + K +A R D+ H +D +
Sbjct: 376 EVADYQVELTDEGQDLTLFAKETLDRLTKPAKLHFAERKPANYDQLD----HPELDLASI 431
Query: 194 KEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL 253
+A +L R + S F +++ GQ + ++ + L+IIDQHA E+ +E +++
Sbjct: 432 DKAYDKLERE-EASSFPELEFFGQMHGTYLFAQGRDGLYIIDQHAAQERVKYEEYRESIG 490
Query: 254 ---IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNT 310
Q+L+VP + LK+ +P+ + G + + +L P+
Sbjct: 491 NVDQSQQQLLVPYIFEFPADDALRLKERMPLLEEVGVFLA--EYGENQFILREHPI---- 544
Query: 311 TLGREDIEELLF-MLQHTNSTEHCRPSRIRAMFA-SRACRKSVMIGRALSVGEMTGLVRN 368
+ E++E ++ M T+ + RA A +C++S+ + L+
Sbjct: 545 WMAEEEVESGIYEMCDMLLLTKEVSIKKYRAELAIMMSCKRSIKANHRIDDHSARQLLYQ 604
Query: 369 MGRIDQPW 376
+ + D P+
Sbjct: 605 LSQCDNPY 612
>gi|90416479|ref|ZP_01224410.1| DNA mismatch repair protein [gamma proteobacterium HTCC2207]
gi|90331678|gb|EAS46906.1| DNA mismatch repair protein [gamma proteobacterium HTCC2207]
Length = 625
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 81/164 (49%), Gaps = 18/164 (10%)
Query: 215 VGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKT----TLIKSQKLVVPQNLHLTKI 270
+ Q +I+ + L I+D HA E+ +E ++ LI SQ L+VP++L +++
Sbjct: 439 IAQLKGIYILAENREGLIIVDMHAAHERITYERMKSAFDDQGLI-SQPLLVPESLAVSQR 497
Query: 271 NQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLF-----MLQ 325
+ + VF K GF +++ +V++ +P L ++E LL +L+
Sbjct: 498 EADAAEQHNEVFAKLGFVVERAAAE--SVIVREIP----AILRGSEVEALLRDVLSDLLE 551
Query: 326 HTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
H NS E R I + ++ AC SV R LSV EM L+R+M
Sbjct: 552 HGNS-ERIR-DHINEILSTMACHGSVRANRKLSVTEMNALLRDM 593
>gi|110678039|ref|YP_681046.1| DNA mismatch repair protein [Roseobacter denitrificans OCh 114]
gi|109454155|gb|ABG30360.1| DNA mismatch repair protein, putative [Roseobacter denitrificans
OCh 114]
Length = 610
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 74/160 (46%), Gaps = 12/160 (7%)
Query: 216 GQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL---IKSQKLVVPQNLHLTKINQ 272
GQ + +II + + + I+DQHA E+ +E L++ + SQ L++P+ + L+ +
Sbjct: 426 GQVHENYIIAQTATGMVIVDQHAAHERLVYEKLKRQMAENGVASQALLIPEIVELSAADC 485
Query: 273 CILKDNLPVFYKNGF---EFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNS 329
L + GF F D+ + + P R I ++L L N+
Sbjct: 486 ASLMQISDDLARLGFVVEPFGGDA-----IAVRETPAILGVVDARALILDILDELADQNA 540
Query: 330 TEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
+E+ R RI A+ + AC S+ GR + EM L+R M
Sbjct: 541 SENIR-MRIDAILSRVACHGSIRSGRWMKTEEMNALLREM 579
>gi|429207239|ref|ZP_19198498.1| DNA mismatch repair protein MutL [Rhodobacter sp. AKP1]
gi|428189614|gb|EKX58167.1| DNA mismatch repair protein MutL [Rhodobacter sp. AKP1]
Length = 616
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 76/160 (47%), Gaps = 14/160 (8%)
Query: 217 QFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKT---TLIKSQKLVVPQNLHLTKINQC 273
Q + +I+ + +S L I+DQHA E+ +E L++ T I Q L++P+ + L+ +
Sbjct: 433 QIHGNWILAQTESGLVIVDQHAAHERLVYEKLKRQRDETGIARQALLIPEIVELSPTDAA 492
Query: 274 ILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGRED----IEELLFMLQHTNS 329
L + G + G V + +P LGR + + ++L L S
Sbjct: 493 RLLEAADELASAGL--VIEPFGGGAVAVREVP----AILGRVEAAPLLRDILDDLADLGS 546
Query: 330 TEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
++ + +R+ A+ + AC SV GRAL EM L+R M
Sbjct: 547 SDRLQ-ARMDAVLSRMACHGSVRSGRALRAEEMNALLREM 585
>gi|418288609|ref|ZP_12901072.1| DNA mismatch repair protein MutL [Neisseria meningitidis NM233]
gi|372201519|gb|EHP15437.1| DNA mismatch repair protein MutL [Neisseria meningitidis NM233]
Length = 658
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 93/401 (23%), Positives = 166/401 (41%), Gaps = 70/401 (17%)
Query: 1 MKLVNEVYHQ-FNNHQYPFIILNIEMSRDSVDVNVTPDKRQI-FMDHEK---LLLATVKV 55
+ V + Y +N P +L +++ ++VDVNV P K +I F D + L+ T+
Sbjct: 264 LHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSRQVHQLVFHTLNK 323
Query: 56 HITDSYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHE-----TIPVPSEDNS 110
+ D+ A ++ +S+ SN+ EV H+ + P+PSE++S
Sbjct: 324 ALADTRA--------DLTESV---------------SNAGEVLHDITGVVSTPMPSENDS 360
Query: 111 N--FSHEANLQQSPETVEPDTPDETIEVIDDMPR-LQGSYRQSTPVTLSLDIIQDQLKAR 167
F +N P + DT + P Q +Y P SL + + +
Sbjct: 361 ENLFDRASNY---PTGNKSDTHNAFGSSGKTAPMPYQSAY---APQQRSLSLRESRAAIN 414
Query: 168 -YARRTVQAQD------RCVENRFHANIDPSKNKEAESEL---NRVIKKSMFEKMKIVGQ 217
YA + D R + RF N+ PS+ +++ + + +S +
Sbjct: 415 TYAELYKKTDDIDLELSRFEQARF-GNM-PSETPAPQTDTPLSDGIPSQSELPPLGFAIA 472
Query: 218 FNLG-FIIVKYDSDLFIIDQHATDEKYNFETL----QKTTLIKSQKLVVPQNLHLTKINQ 272
LG +I+ + + L +ID HA E+ N+E + Q+ ++SQ+L++P +
Sbjct: 473 QLLGIYILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGRLQSQRLLIPVTFAASHEEC 532
Query: 273 CILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDI----EELLFMLQHTN 328
L D G E S GN L + LG+ D+ ++L L
Sbjct: 533 AALADYAETLAGFGLEL---SDMGGNTLAVR---AAPAMLGKSDVVSLARDVLGELAQVG 586
Query: 329 STEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
S++ R + A+ +C S+ GR L++ EM L+R+M
Sbjct: 587 SSQTIEEHENR-ILATMSCHGSIRAGRRLTLPEMNALLRDM 626
>gi|331005105|ref|ZP_08328508.1| DNA mismatch repair protein MutL [gamma proteobacterium IMCC1989]
gi|330421074|gb|EGG95337.1| DNA mismatch repair protein MutL [gamma proteobacterium IMCC1989]
Length = 619
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 79/158 (50%), Gaps = 6/158 (3%)
Query: 215 VGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKT---TLIKSQKLVVPQNLHLTKIN 271
+ Q +I+ + L ++D HA E+ +E ++ +++Q L+VPQ L +++
Sbjct: 433 IAQLKGIYILSENAQGLIVVDMHAAHERVVYERMKSAFDQGNVQAQPLLVPQTLAVSEKE 492
Query: 272 QCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTE 331
++ + VF + GF +++ ++L+ +P+S + + ++L L S++
Sbjct: 493 VACIESHQEVFQQLGF--VVETAGPESLLIRQIPVSLKNANVEQLVRDVLSDLIQYGSSD 550
Query: 332 HCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
+ I + ++ AC SV R LSV EM L+R+M
Sbjct: 551 RIK-QHINELLSTMACHGSVRANRTLSVPEMNALLRDM 587
>gi|449973524|ref|ZP_21814764.1| DNA mismatch repair protein [Streptococcus mutans 11VS1]
gi|450106966|ref|ZP_21860779.1| DNA mismatch repair protein [Streptococcus mutans SF14]
gi|449179453|gb|EMB81664.1| DNA mismatch repair protein [Streptococcus mutans 11VS1]
gi|449222659|gb|EMC22378.1| DNA mismatch repair protein [Streptococcus mutans SF14]
Length = 651
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 108/238 (45%), Gaps = 38/238 (15%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMNQ 74
++P +++I++ DVNV P K+++ + EK L+ + I DS +
Sbjct: 280 RFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMNLISSAIADSL------------R 327
Query: 75 SMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPDETI 134
E P + ++ K + ++ E +P+ + N + N ET + E
Sbjct: 328 EQELIPDALENLAKTSTNKKQKFEQTQLPL-KQSNLYYDKTQNDFFLKETTVSEASSE-F 385
Query: 135 EVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKNK 194
V+D ++ +T D + +YA+R Q R EN+ H ++ + NK
Sbjct: 386 TVVD----------KAVNIT---DNVSGHSSVKYAQR----QMRTCENKEHPSLTMT-NK 427
Query: 195 EAESELNRVIK------KSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFE 246
+ + +L+R+++ KS F +++ GQ + ++ + + L+IIDQHA E+ +E
Sbjct: 428 QQKRQLSRIVESLENEEKSTFPELEYFGQMHGTYLFAQGEGGLYIIDQHAAQERVKYE 485
>gi|218768445|ref|YP_002342957.1| DNA mismatch repair protein [Neisseria meningitidis Z2491]
gi|433541296|ref|ZP_20497745.1| DNA mismatch repair protein mutL [Neisseria meningitidis 63006]
gi|20455150|sp|Q9JTS2.1|MUTL_NEIMA RecName: Full=DNA mismatch repair protein MutL
gi|121052453|emb|CAM08789.1| DNA mismatch repair protein [Neisseria meningitidis Z2491]
gi|432276943|gb|ELL31995.1| DNA mismatch repair protein mutL [Neisseria meningitidis 63006]
Length = 658
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 96/401 (23%), Positives = 170/401 (42%), Gaps = 70/401 (17%)
Query: 1 MKLVNEVYHQ-FNNHQYPFIILNIEMSRDSVDVNVTPDKRQI-FMDHEK---LLLATVKV 55
+ V + Y +N P +L +++ ++VDVNV P K +I F D + L+ T+
Sbjct: 264 LHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSRQVHQLVFHTLNK 323
Query: 56 HITDSYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETI-----PVPSEDNS 110
+ D+ A ++ +S+ SN+ EV H+ P+PSE++S
Sbjct: 324 ALADTRA--------DLTESV---------------SNAGEVLHDITGVTPAPMPSENDS 360
Query: 111 -NFSHEANLQQSPETVEPDTPDETIEVIDDMPR-LQGSYRQSTPVTLSLDIIQDQLKAR- 167
N + A+ P +PDT + P Q +Y P SL + + +
Sbjct: 361 ENLFNRAS--DYPTGNKPDTRNAFGSSGKTAPMPYQSAY---APQQRSLSLRESRAAMNT 415
Query: 168 YARRTVQAQDRCVE------NRFHANIDPSKNKEAESEL---NRVIKKSMFEKMKIVGQF 218
YA + D +E RF N+ PS+ +++ + + +S +
Sbjct: 416 YAELYKKTDDIDLELSQFEQARF-GNM-PSETPAPKTDTPLSDGIPSQSELPPLGFAIAQ 473
Query: 219 NLG-FIIVKYDSDLFIIDQHATDEKYNFETL----QKTTLIKSQKLVVPQNLHLTKINQC 273
LG +I+ + + L +ID HA E+ N+E + Q+ ++SQ+L++P +
Sbjct: 474 LLGIYILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGRLQSQRLLIPITFAASHEECA 533
Query: 274 ILKDNLPVFYKNGFEFSFDSSDDGNVL-LTSLPMSKNTTLGREDI----EELLFMLQHTN 328
L D G E S GN L + ++P T LG+ D+ ++L L
Sbjct: 534 ALADYAETLAGFGLEL---SDMGGNTLAVRAVP----TMLGKADVVSLARDVLGELAQVG 586
Query: 329 STEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
S++ + A+ +C SV GR L++ EM L+R+M
Sbjct: 587 SSQTIEEHE-NHILATMSCHGSVRAGRQLTLPEMNALLRDM 626
>gi|450174689|ref|ZP_21884720.1| DNA mismatch repair protein [Streptococcus mutans SM1]
gi|449248145|gb|EMC46406.1| DNA mismatch repair protein [Streptococcus mutans SM1]
Length = 651
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 108/238 (45%), Gaps = 38/238 (15%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMNQ 74
++P +++I++ DVNV P K+++ + EK L+ + I DS +
Sbjct: 280 RFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMNLISSAIADSL------------R 327
Query: 75 SMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPDETI 134
E P + ++ K + ++ E +P+ + N + N ET + E
Sbjct: 328 EQELIPDALENLAKTSTNKKQKFEQTQLPL-KQSNLYYDKTQNDFFLKETTVSEASSE-F 385
Query: 135 EVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKNK 194
V+D ++ +T D + +YA+R Q R EN+ H ++ + NK
Sbjct: 386 TVVD----------KAVNIT---DNVSGHSSVKYAQR----QMRTCENKEHPSLTMT-NK 427
Query: 195 EAESELNRVIK------KSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFE 246
+ + +L+R+++ KS F +++ GQ + ++ + + L+IIDQHA E+ +E
Sbjct: 428 QQKRQLSRIVESLENEEKSTFPELEYFGQMHGTYLFAQGEGGLYIIDQHAAQERVKYE 485
>gi|449989440|ref|ZP_21821055.1| DNA mismatch repair protein [Streptococcus mutans NVAB]
gi|449182554|gb|EMB84574.1| DNA mismatch repair protein [Streptococcus mutans NVAB]
Length = 651
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 108/238 (45%), Gaps = 38/238 (15%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMNQ 74
++P +++I++ DVNV P K+++ + EK L+ + I DS +
Sbjct: 280 RFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMNLISSAIADSL------------R 327
Query: 75 SMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPDETI 134
E P + ++ K + ++ E +P+ + N + N ET + E
Sbjct: 328 EQELIPDALENLAKTSTNKKQKFEQTQLPL-KQSNLYYDKTQNDFFLKETTVSEASSE-F 385
Query: 135 EVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKNK 194
V+D ++ +T D + +YA+R Q R EN+ H ++ + NK
Sbjct: 386 TVVD----------KAVNIT---DNVSGHSSVKYAQR----QMRTCENKEHPSLTMT-NK 427
Query: 195 EAESELNRVIK------KSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFE 246
+ + +L+R+++ KS F +++ GQ + ++ + + L+IIDQHA E+ +E
Sbjct: 428 QQKRQLSRIVESLENEEKSTFPELEYFGQMHGTYLFAQGEGGLYIIDQHAAQERVKYE 485
>gi|261367033|ref|ZP_05979916.1| DNA mismatch repair protein MutL [Subdoligranulum variabile DSM
15176]
gi|282571151|gb|EFB76686.1| DNA mismatch repair domain protein [Subdoligranulum variabile DSM
15176]
Length = 687
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 88/396 (22%), Positives = 163/396 (41%), Gaps = 61/396 (15%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEK----LLLATVKVHIT--DSYAIGFTVD 68
++P +L +EM D VDVNV P K +I E + V+ +T S F +
Sbjct: 280 KFPGAVLMLEMPADLVDVNVHPAKTEIRFARESDVFDAVYRAVRTALTTPGSGECRFEMS 339
Query: 69 GNNMNQSME---QDPSSDVD------MEKIQRSNSEEVEHETI----------PVPSEDN 109
+ Q E + PSS EK + + E+ + P+P
Sbjct: 340 HDTSAQKAEVPAKQPSSQGTPAHPQVPEKSRFTTLSAAEYRALNRLTEPVPARPLPGVVV 399
Query: 110 SNFSHEANLQQSPE--TVEPDTP----DETIEVIDDMPRLQG------SYRQSTPVTLSL 157
S S + Q +P + P P +E ++++ D+P + S STP+ + L
Sbjct: 400 SVESPAPHYQTTPAKPSEAPFRPTTQQEEVLDILPDLPEEKTSPVSTVSQTSSTPMGIPL 459
Query: 158 DIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQ 217
+ ++ ++T+QA P + +E + + + +++VG+
Sbjct: 460 EKEPAPVEPEPEQQTMQALSAL----------PQETQEPQ---QITMTPPSVQPLRLVGE 506
Query: 218 FNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL-IKSQKLVVPQNLHLTKINQCILK 276
+II + + +L +ID+HA E+ FE L K + +Q L+VP ++LT + L
Sbjct: 507 VFKTYIITEREGELCLIDKHAAHERILFEKLAKDYGNVPAQMLLVPVQVNLTAAEKQALL 566
Query: 277 DNLPVFYKNGFEFS-FDSSDDGNVLLTSLPMSKNTTLGREDIEELLFML--QHTNSTEHC 333
N + G E F S V++ ++P +D+E+++ L + + +
Sbjct: 567 QNSEMLNDAGLEVEDFGGS---TVMVRAVPADVQV----DDVEDMVVELASRFVDGSRDA 619
Query: 334 RPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
+ + S ACR ++ G S EM L +N+
Sbjct: 620 LREKTEWVLHSIACRAAIKAGDRTSDAEMLVLAQNI 655
>gi|333984267|ref|YP_004513477.1| DNA mismatch repair protein mutL [Methylomonas methanica MC09]
gi|333808308|gb|AEG00978.1| DNA mismatch repair protein mutL [Methylomonas methanica MC09]
Length = 629
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 83/173 (47%), Gaps = 21/173 (12%)
Query: 222 FIIVKYDSDLFIIDQHATDEKYNFETLQK---TTLIKSQKLVVPQNLHLTKINQCILKDN 278
+I+ + + + ++D HA E+ +E L++ I SQ L++P + ++ + +
Sbjct: 450 YILAETANGIILVDAHAAHERVTYERLKQHYHKQAIVSQPLLLPIKIQVSSAEADLAEQQ 509
Query: 279 LPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLF-MLQHTNSTEHCRPSR 337
F+ GFE + S V+L ++P L + D+++LL +L N R +
Sbjct: 510 HAFFHGLGFEI--NRSGPETVVLRAVP----ALLAKTDVDQLLRDILADLNVHGVSRKAE 563
Query: 338 --IRAMFASRACRKSVMIGRALSVGEMTGLVRNM---GRIDQ------PWVSM 379
I A+ A+ AC SV R L++ EM L+R+M RI Q WV++
Sbjct: 564 ESINAILATMACHGSVRAKRKLTIEEMNALLRDMEQTERIGQCNHGRPTWVAL 616
>gi|85705062|ref|ZP_01036162.1| DNA mismatch repair protein [Roseovarius sp. 217]
gi|85670384|gb|EAQ25245.1| DNA mismatch repair protein [Roseovarius sp. 217]
Length = 611
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 74/153 (48%), Gaps = 6/153 (3%)
Query: 222 FIIVKYDSDLFIIDQHATDEKYNFETLQKT---TLIKSQKLVVPQNLHLTKINQCILKDN 278
+II + ++ + I+DQHA E+ +E L++ + + +Q L++P+ + L++ + +L ++
Sbjct: 433 YIIAQTETGMVIVDQHAAHERLVYERLKRQMAESGVAAQALLIPEIVDLSEADCALLMEH 492
Query: 279 LPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRI 338
G + G++ + P + ++L LQ ++ + RI
Sbjct: 493 AEAL--AGLGLGIEPFGPGSLAVRETPAILGPVNAGALLRDILDELQDQGASGTLK-LRI 549
Query: 339 RAMFASRACRKSVMIGRALSVGEMTGLVRNMGR 371
A+ + AC SV GR +S EM L+R M R
Sbjct: 550 DAILSRVACHGSVRSGRRMSAEEMNALLRKMER 582
>gi|395328076|gb|EJF60471.1| DNA mismatch repair protein MutL [Dichomitus squalens LYAD-421 SS1]
Length = 425
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 33/54 (61%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKV 55
K NEVY FN Q PF+I + + DS D+NV+PDKR I + E L+ +KV
Sbjct: 310 KAFNEVYRSFNATQSPFVIADFILPTDSCDINVSPDKRTILLHSENNLVQALKV 363
>gi|313888302|ref|ZP_07821973.1| DNA mismatch repair protein, C-terminal domain protein
[Peptoniphilus harei ACS-146-V-Sch2b]
gi|312845705|gb|EFR33095.1| DNA mismatch repair protein, C-terminal domain protein
[Peptoniphilus harei ACS-146-V-Sch2b]
Length = 624
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 155/366 (42%), Gaps = 45/366 (12%)
Query: 14 HQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMN 73
++YP IL I++ +DVN+ P K +I + +E +L A + + + ++
Sbjct: 277 NRYPVFILYIDIDPKLIDVNIHPKKNEIKISNENILTALLSEVVEEVIYPNRSIREIEFE 336
Query: 74 QSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPDET 133
+ E D+ +SEE SE N+N +L++ E E DT E
Sbjct: 337 EKKENINVFDI----FDEDDSEEALDSIKITKSEKNNNLKSLWDLEKEIE--ESDTEKE- 389
Query: 134 IEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKN 193
+ +++ L YR+ + + + ++ + + NR + ID
Sbjct: 390 -QALNEEALL---YRE-----------EYKKDSNFSNDKEHIEKNFLFNRKASQID---- 430
Query: 194 KEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL 253
E LN I +F+ ++ + D +F++DQHA E+ N+E K L
Sbjct: 431 ---EGLLNTRISGVLFKTYILLEN--------QRDGKVFVVDQHAAHERVNYEKFLKMYL 479
Query: 254 ---IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNT 310
I SQ L+ P+ + L ++ + + + +F K GF+ + D +V+L +PM
Sbjct: 480 NSEISSQILIKPEIIELNQLEYDKILNYIDLFTKLGFK--IEDFGDRSVVLREVPMIFGL 537
Query: 311 TLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMG 370
I +++ L S+ + + M +AC+ SV G LS E+ L++++
Sbjct: 538 PTYVNFIRDIIDSLDKEISSNY-EADLYKIM--RKACKASVKAGDDLSDIEIEALIKDLK 594
Query: 371 RIDQPW 376
+ P+
Sbjct: 595 NCENPY 600
>gi|189424059|ref|YP_001951236.1| DNA mismatch repair protein [Geobacter lovleyi SZ]
gi|238692123|sp|B3E5Z2.1|MUTL_GEOLS RecName: Full=DNA mismatch repair protein MutL
gi|189420318|gb|ACD94716.1| DNA mismatch repair protein MutL [Geobacter lovleyi SZ]
Length = 589
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 209 FEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQ---KTTLIKSQKLVVPQNL 265
F + ++GQF +I+ + + L IIDQHA E+ FE L+ T I+SQ+L++P L
Sbjct: 398 FSGLSVIGQFRAAYILCQAEDRLVIIDQHAAYERVRFEQLKAGFATGGIESQRLLLPDTL 457
Query: 266 HLTKINQCILKDNLPVFYKNGFEF 289
L+ ++ L + GFE
Sbjct: 458 ELSFSEADTVRRYLNILEPLGFEL 481
>gi|336434948|ref|ZP_08614667.1| hypothetical protein HMPREF0988_00252 [Lachnospiraceae bacterium
1_4_56FAA]
gi|336002356|gb|EGN32467.1| hypothetical protein HMPREF0988_00252 [Lachnospiraceae bacterium
1_4_56FAA]
Length = 706
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 93/419 (22%), Positives = 175/419 (41%), Gaps = 47/419 (11%)
Query: 2 KLVNEVYHQFN-NHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATV--KVH-- 56
K + Y F H++PF +L+ + ++VDVNV P K ++ ++ + V +H
Sbjct: 266 KAAEDAYKDFMMQHKFPFFVLHFLVDGETVDVNVHPTKMELRFQKQQAVYDAVFEAIHRR 325
Query: 57 ITDSYAIGFTV--DGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSH 114
+ D I + ++ EQ PS + K S I +P D++
Sbjct: 326 LLDQELIPQVTLPEPKQPEKAKEQSPSPFLLKPKSGSGQSAAPVSRPISLPDTDSTASED 385
Query: 115 EANLQ---------QSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSL-------- 157
AN + QS EP+T DE + R+ + +S+ ++
Sbjct: 386 TANTRIHSSVQSPVQSSAKAEPETKDEDYFIRKMRERVMSYHNRSSSAEITGKSAIFRSG 445
Query: 158 -----DIIQDQLK--------ARYARRTVQAQDRCVENRFHANIDPSKNKEAESELN--- 201
D I++ +K A +R + Q + + N + + ++ +L+
Sbjct: 446 DQGQEDRIKNAVKETETVLQKASPLQRAITPQMQTPPEQLKENGNYTVEQKPPKQLDLFE 505
Query: 202 -RVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFE-TLQ--KTTLIKSQ 257
++K+ + + +++GQ + +V++ +L+IIDQHA E+ +E TL+ KT SQ
Sbjct: 506 ENLLKREIRAEYRLIGQVFDTYWLVQFHDNLYIIDQHAAHERVLYERTLKEMKTREFTSQ 565
Query: 258 KLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDI 317
L P L+L+ +L + F + GFE + V ++P + +E +
Sbjct: 566 YLSPPIILNLSMQEAEVLNTHKDRFAQLGFEIEEFGGEAYAV--RAVPANLFGIAKKELL 623
Query: 318 EELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
E+L L +T P I AS +C+ +V LS E+ L+ + +D P+
Sbjct: 624 LEMLDALSDGLNTSMT-PDLIDEKVASMSCKAAVKGNNRLSAREVDTLIGELLLLDNPY 681
>gi|70940514|ref|XP_740663.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56518530|emb|CAH84055.1| hypothetical protein PC300836.00.0 [Plasmodium chabaudi chabaudi]
Length = 357
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHI 57
K++N +Y +FN+ YP II NI ++D+NVTPDKR++F E L +K+ +
Sbjct: 277 KIINTIYREFNSRLYPIIICNIISDAKNIDINVTPDKREVFFTFENELCEQIKIEL 332
>gi|398814313|ref|ZP_10572994.1| DNA mismatch repair protein MutL [Brevibacillus sp. BC25]
gi|398036582|gb|EJL29791.1| DNA mismatch repair protein MutL [Brevibacillus sp. BC25]
Length = 676
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 80/385 (20%), Positives = 146/385 (37%), Gaps = 36/385 (9%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMNQ 74
+YP + L IEM VDVNV P K + E L + ++ + ++ G + +
Sbjct: 280 RYPIVALQIEMDPSLVDVNVHPAKLEARFSKEDELCSAIEQSVKETLRQGL-----GIVR 334
Query: 75 SMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQ---SPET------- 124
M P + V + +Q ++ P +S + LQ+ ET
Sbjct: 335 PMATQPKAKVVTQVVQPQFDLQISKPETP----QSSLLAASPRLQEWMAKQETTSMRVDV 390
Query: 125 ---VEPDTPDETI-EVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQ---- 176
+ P + T+ E + +L+ + ++ P+ + + DQ R A + + +
Sbjct: 391 VPHIAPSIENGTVKESAANYEKLESAKVEAIPLEIVQATLLDQTDTREAFQPYETKLPSQ 450
Query: 177 -DRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIID 235
D +N D S + N S M VGQ + +I+ + D +++ID
Sbjct: 451 LDIAQDNSAAVGTDQSPPLSEATNENET--DSPVPVMYPVGQVHGTYIVAQNDEGMYLID 508
Query: 236 QHATDEKYNFETLQKTTL---IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFD 292
QHA E+ +E I SQ ++ P + T L+ L + G E +
Sbjct: 509 QHAAQERIFYEYFMDKLAEEGISSQIMLFPHTVEYTAAEASKLEKRLSLLQSFGLE--IE 566
Query: 293 SSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFA-SRACRKSV 351
+ ++ + P E IEEL+ + T +R A +C+ S+
Sbjct: 567 AFGGRTFIVRAHPHWFPEGAELEVIEELIQFVLETGENAQANVVLMREKAAIMMSCKASI 626
Query: 352 MIGRALSVGEMTGLVRNMGRIDQPW 376
R L+ EM L+ + + P+
Sbjct: 627 KANRFLTHAEMESLLNQLRKTSSPY 651
>gi|448680343|ref|ZP_21690660.1| DNA mismatch repair protein MutL [Haloarcula argentinensis DSM
12282]
gi|445768787|gb|EMA19864.1| DNA mismatch repair protein MutL [Haloarcula argentinensis DSM
12282]
Length = 717
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 114/305 (37%), Gaps = 50/305 (16%)
Query: 3 LVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYA 62
+++ Q +YPF +L +++ VDVNV P K ++ ++ + V+ + D+
Sbjct: 284 VIDAYGTQIAPDRYPFAVLFLDVPAGDVDVNVHPRKMEVRFADDEGVREQVRTAVEDALL 343
Query: 63 IGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSP 122
+ +S S + +I + E + E P + A ++
Sbjct: 344 R------EGLLRSTAPRGRSAPEQTEITPESDEASDSERQPSRPDGRDTTDETAASARTD 397
Query: 123 ETVEPDTPDETIEVIDDMP--RLQGSYRQST--------PVTLSLDIIQ----------- 161
T + D T++ D P R GS ++T P S+D +
Sbjct: 398 GTTAESSADTTVQGSDTDPTERPSGSQTETTGHRSTDTTPSDQSVDTKRASPAEAKDDAP 457
Query: 162 DQLKARYARRTVQAQDRCVENRFHANIDPSKNKEAESELNRV----------------IK 205
+ +AR R +V D E D S +AE+E
Sbjct: 458 GESEARQTRGSVSGGDSAGER-----TDASAAGQAETERGERKFTGGQEQARLGDEPDAT 512
Query: 206 KSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKT--TLIKSQKLVVPQ 263
M+I+GQ +++ + D L ++DQHA DE+ N+E L+ +Q L P
Sbjct: 513 HESLPSMRILGQLADTYVVAETDDGLVLVDQHAADERVNYERLKAKFEGETTTQALATPV 572
Query: 264 NLHLT 268
L LT
Sbjct: 573 ELELT 577
>gi|431793803|ref|YP_007220708.1| DNA mismatch repair protein MutL [Desulfitobacterium
dichloroeliminans LMG P-21439]
gi|430784029|gb|AGA69312.1| DNA mismatch repair protein MutL [Desulfitobacterium
dichloroeliminans LMG P-21439]
Length = 662
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 88/410 (21%), Positives = 161/410 (39%), Gaps = 73/410 (17%)
Query: 2 KLVNEVYHQFNNHQ-YPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLL---------A 51
+ + E YH + YP ++LN+++ DVNV P K +I EK L+
Sbjct: 267 RAILEGYHTLIPAKVYPIVVLNLQIPPHEYDVNVHPTKMEIRFHKEKELMEFIAEGVRRT 326
Query: 52 TVKVHITDSYAIGFTVD----GNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSE 107
++ H Y F+VD G N N ++ D D +++ ++ ++
Sbjct: 327 LLEAHPVTPYE-KFSVDKRFPGTNSNSILQNDSRQGYDSKELASREAKSAQY-------- 377
Query: 108 DNSNFSHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKAR 167
FS + +L +SP+ ++ P +G Y + +L D +A
Sbjct: 378 -TFGFSPKVSL-KSPQ-------------LNLTPTPEGFYAKPPANSLKED------RAH 416
Query: 168 YARRTVQAQDRCVENRFHANIDPSKNK----EAESEL----------NRVIKKSMFEKMK 213
+ ++ R N++P K E +SEL ++S ++
Sbjct: 417 W-EPSINPSPRVSSEPSPGNLNPEDIKVTPLETQSELACEKDPYILREEFTEQSPLLALR 475
Query: 214 IVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKS---QKLVVPQNLHLTKI 270
+GQ +I+ L I DQHA E+ N+E L K S Q L++P + +
Sbjct: 476 PIGQVFDTYILASDGEQLVIFDQHAAHERINYERLLKEHQKNSGDCQMLLIPLPMEFSPG 535
Query: 271 NQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPM----SKNTTLGREDIEELLFMLQH 326
+ L ++ N F + LL +P + TL R+ +E++L Q
Sbjct: 536 EEDALLEHF--LLLNDMGFILEQFGTRTYLLRGIPAYSGPYQGETLLRDFLEQVLLH-QI 592
Query: 327 TNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
S + I + AC++S+ +L++ EM L+ + + D P+
Sbjct: 593 PPSMDQLLEEWIYML----ACKESIKAKASLNLMEMEQLIVQLSKTDSPY 638
>gi|330501621|ref|YP_004378490.1| DNA mismatch repair protein [Pseudomonas mendocina NK-01]
gi|328915907|gb|AEB56738.1| DNA mismatch repair protein [Pseudomonas mendocina NK-01]
Length = 623
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 81/166 (48%), Gaps = 22/166 (13%)
Query: 215 VGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL---IKSQKLVVPQNLHLTKIN 271
V Q +I+ + + ++D HA E+ +E L++ ++ Q L+VP+++ L++
Sbjct: 437 VAQLKGVYILAENAQGMVVVDMHAAHERITYERLKQAMASEGLRGQPLLVPESIALSQRE 496
Query: 272 QCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPM----SKNTTLGREDIEELLFMLQHT 327
+++ F + GFE + +V + +P ++ T L R+ + +LL
Sbjct: 497 ADCAEEHGEWFQRLGFELQRLGEE--SVAIRQIPALLKQAEATQLVRDVLADLL------ 548
Query: 328 NSTEHCRPSRIRA----MFASRACRKSVMIGRALSVGEMTGLVRNM 369
E+ RI+A + A+ AC +V R L++ EM GL+R+M
Sbjct: 549 ---EYGTSDRIQAHLNELLATMACHGAVRANRRLTIPEMNGLLRDM 591
>gi|161870311|ref|YP_001599481.1| DNA mismatch repair protein [Neisseria meningitidis 053442]
gi|189030402|sp|A9M0G1.1|MUTL_NEIM0 RecName: Full=DNA mismatch repair protein MutL
gi|161595864|gb|ABX73524.1| DNA mismatch repair protein [Neisseria meningitidis 053442]
Length = 658
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 93/397 (23%), Positives = 165/397 (41%), Gaps = 62/397 (15%)
Query: 1 MKLVNEVYHQ-FNNHQYPFIILNIEMSRDSVDVNVTPDKRQI-FMDHEK---LLLATVKV 55
+ V + Y +N P +L +++ ++VDVNV P K +I F D + L+ T+
Sbjct: 264 LHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSRQVHQLVFHTLNK 323
Query: 56 HITDSYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETI-----PVPSEDNS 110
+ D+ A ++ +S+ SN+ EV H+ P+PSE++S
Sbjct: 324 ALADTRA--------DLTESV---------------SNAGEVLHDITGVTPAPMPSENDS 360
Query: 111 -NFSHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYA 169
N A+ P +PDT + P + R +LSL + + YA
Sbjct: 361 ENLFDSAS--DYPTGNKPDTRNAFGSSGKTAPMPYQAARAPQQHSLSLRESRAAMNT-YA 417
Query: 170 RRTVQAQD------RCVENRFHANIDPSKNKEAESELNRVI-KKSMFEKMKIVGQFNLG- 221
+ D R + RF + + ++ L+ I +S + LG
Sbjct: 418 ELYKKTDDIDLELSRLEQARFGNMPSETPIPKTDTPLSDGIPSQSELPPLGFAIAQLLGI 477
Query: 222 FIIVKYDSDLFIIDQHATDEKYNFETL----QKTTLIKSQKLVVPQNLHLTKINQCILKD 277
+I+ + + L +ID HA E+ N+E + Q+ ++SQ+L++P + L D
Sbjct: 478 YILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGKLQSQRLLIPVTFAASHEECAALAD 537
Query: 278 NLPVFYKNGFEFSFDSSDDGNVL-LTSLPMSKNTTLGREDI----EELLFMLQHTNSTEH 332
G E S GN L + ++P LG+ D+ +++L L S++
Sbjct: 538 YAETLAGFGLEL---SDMGGNTLAVRAVP----AMLGKADVVSLAKDVLGELAQVGSSQT 590
Query: 333 CRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
+ A+ +C SV GR L++ EM L+R+M
Sbjct: 591 IEEHE-NHILATMSCHGSVRAGRQLTLPEMNALLRDM 626
>gi|260549350|ref|ZP_05823569.1| DNA mismatch repair ATPase [Acinetobacter sp. RUH2624]
gi|424055177|ref|ZP_17792700.1| DNA mismatch repair protein MutL [Acinetobacter nosocomialis
Ab22222]
gi|425740146|ref|ZP_18858321.1| DNA mismatch repair protein MutL [Acinetobacter baumannii WC-487]
gi|260407459|gb|EEX00933.1| DNA mismatch repair ATPase [Acinetobacter sp. RUH2624]
gi|407439102|gb|EKF45644.1| DNA mismatch repair protein MutL [Acinetobacter nosocomialis
Ab22222]
gi|425495298|gb|EKU61485.1| DNA mismatch repair protein MutL [Acinetobacter baumannii WC-487]
Length = 651
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 76/371 (20%), Positives = 152/371 (40%), Gaps = 51/371 (13%)
Query: 11 FNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGN 70
+ HQ+ +L +E+ +++DVNV P K +I +++ + V+ + ++ A F
Sbjct: 288 LHGHQHSSYLLFLEVDPENIDVNVHPTKHEIRFLNQREVHEFVRHYAKETLA-QFQTASA 346
Query: 71 NMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPV--PSEDNSNFSHEANLQQSPETVEP- 127
++ Q+M+ D + ++ ++ + + H T + D N S Q S E +
Sbjct: 347 DLAQAMKVDDTQNLSVQPQPKYQEQFTLHRTEQAVDTTLDKPNSS-----QPSTELLTDF 401
Query: 128 -DTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHA 186
++ + + + P+ GS + + + L ++DQ
Sbjct: 402 NNSRPQAVHYAEQTPKYNGSAQLNNALKTYLAPLRDQ----------------------- 438
Query: 187 NIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFE 246
P+ N + + V K F + Q + +I+ + L I+D HA E+ +
Sbjct: 439 ---PATNFSVDENVEPVAKIDEFPLGIAIAQLHGIYILAQNTEGLIIVDMHAAHERILLQ 495
Query: 247 TLQ----KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLT 302
++ K SQ+L++P+ + ++++ ++D + G E D D V++
Sbjct: 496 QMKNAWDKPEFWTSQQLLIPKVISISRMQAVRVEDLKSQLERLGLE--IDLYGDEQVIVR 553
Query: 303 SLPMSKNTTLGREDIE----ELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALS 358
+P L + D E ELL L + + R + A AC +V R LS
Sbjct: 554 GVP----AILQKADFENLIPELLNDLDPNDEAQGLLQKR-DELLAGMACHGAVRAHRQLS 608
Query: 359 VGEMTGLVRNM 369
+ EM L+R M
Sbjct: 609 LSEMNALLRQM 619
>gi|445370540|ref|ZP_21425882.1| DNA mismatch repair protein [Streptococcus thermophilus MTCC 5460]
gi|445385388|ref|ZP_21427590.1| DNA mismatch repair protein [Streptococcus thermophilus MTCC 5461]
gi|444751654|gb|ELW76371.1| DNA mismatch repair protein [Streptococcus thermophilus MTCC 5461]
gi|444751668|gb|ELW76384.1| DNA mismatch repair protein [Streptococcus thermophilus MTCC 5460]
Length = 647
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 84/379 (22%), Positives = 157/379 (41%), Gaps = 65/379 (17%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMNQ 74
++P +++I++ DVNV P K+++ + EK L+A +K I S
Sbjct: 280 RFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMALIKSAIAQSL------------- 326
Query: 75 SMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQ---SPETVEPDTPD 131
EQD D +E + +S++ +N +++N +PETV+ D
Sbjct: 327 -REQDLIPDA-LENLAKSSTRGATRSVQTSLPLKQTNLYYDSNRNDFFVTPETVQEDIK- 383
Query: 132 ETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPS 191
P + S ++SL + Q + A+R+ D H +D
Sbjct: 384 ---------PLVSKS-----ESSVSLVANKQQPTVKQAKRSADDSDSE-----HGKLD-Y 423
Query: 192 KNKEAESELNRVIKK------SMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNF 245
KNK S+L R+++ S F +++ GQ + ++ + L+IIDQHA E+ +
Sbjct: 424 KNK---SKLKRMLENLTNEETSTFPELEFFGQMHGTYLFAQGQGGLYIIDQHAAQERVKY 480
Query: 246 ETL-QKTTLIKS--QKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLT 302
E +K ++ S Q+L+VP + + L++ +P+ N + + +L
Sbjct: 481 EYYREKIGVVDSSLQQLLVPYLFEFSGSDYISLQEKMPLL--NQVCIYLEPYGNNTFILR 538
Query: 303 SLPMSKNTTLGREDIEELLF----MLQHTNSTEHCRPSRIRAMFA-SRACRKSVMIGRAL 357
P+ + E+IE ++ ML TN RA A +C++S+ AL
Sbjct: 539 EHPI----WMKEEEIESAVYEMCDMLLLTN---EVSVKTYRAELAIMMSCKRSIKANHAL 591
Query: 358 SVGEMTGLVRNMGRIDQPW 376
L+ + + P+
Sbjct: 592 DDYSARDLLVQLAQCKNPY 610
>gi|417916550|ref|ZP_12560127.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus mitis bv. 2 str. SK95]
gi|342829441|gb|EGU63795.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus mitis bv. 2 str. SK95]
Length = 649
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 73/367 (19%), Positives = 159/367 (43%), Gaps = 39/367 (10%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMNQ 74
++P +++I + DVNV P K+++ + EK L+A V I++S Q
Sbjct: 280 RFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMALVSEAISNSLK----------EQ 329
Query: 75 SMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPDETI 134
++ P + ++ K N ++VE +P+ ++N+ + + L + + + D +
Sbjct: 330 AL--IPDALENLAKSTVRNRQKVEQTILPL--KENTLYYEKTELSKPSQA---EVADHQV 382
Query: 135 EVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKNK 194
E+ ++ L ++ +LD + K +A R + D+ H +D +
Sbjct: 383 ELTEEGRDLTLFAKE------TLDQLTKPAKLHFAERKPASYDQLD----HPELDLASLD 432
Query: 195 EAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL- 253
+A +L R + S F +++ GQ + ++ + L+IIDQHA E+ +E +++
Sbjct: 433 KAYDKLERE-ESSSFPELEFFGQMHGTYLFAQGRDGLYIIDQHAAQERVKYEEYRESIGN 491
Query: 254 --IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTT 311
Q+L+VP + L++ +P+ + G + + +L P+
Sbjct: 492 VDQSQQQLLVPYIFEFPADDALRLRERMPLLEEVGVFLA--EYGENQFILREHPI----W 545
Query: 312 LGREDIEELLF-MLQHTNSTEHCRPSRIRAMFA-SRACRKSVMIGRALSVGEMTGLVRNM 369
+ E+IE ++ M T+ + RA A +C++S+ + L+ +
Sbjct: 546 MAEEEIESGIYEMCDMLLLTKEVSIKKYRAELAIMMSCKRSIKANHRIDDHSARQLLYQL 605
Query: 370 GRIDQPW 376
+ D P+
Sbjct: 606 SQCDNPY 612
>gi|448547361|ref|ZP_21626839.1| DNA mismatch repair protein MutL [Haloferax sp. ATCC BAA-645]
gi|445716372|gb|ELZ68116.1| DNA mismatch repair protein MutL [Haloferax sp. ATCC BAA-645]
Length = 562
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 197 ESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQK---TTL 253
+S L V S+F+ ++++G+F +++ + D +L ++DQHA E+ N+E L++ +
Sbjct: 354 DSSLAPVEAASVFDDLRVIGRFRGLYLLCEADDELLVVDQHAAHERINYERLRRAVESAG 413
Query: 254 IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGF 287
+ S + P + L+ + +L N + K GF
Sbjct: 414 VDSVAVDPPATVSLSPADAALLDANRDLVEKLGF 447
>gi|390597110|gb|EIN06510.1| DNA mismatch repair protein MutL [Punctularia strigosozonata
HHB-11173 SS5]
Length = 380
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKV 55
K NEVY +N HQ PFI+ + + ++ D+NV+PDKR IF+ E L+ +KV
Sbjct: 323 KAFNEVYRSYNIHQSPFIVADFLLPGNTCDINVSPDKRTIFIHSEINLIQALKV 376
>gi|148553415|ref|YP_001260997.1| DNA mismatch repair protein [Sphingomonas wittichii RW1]
gi|166232109|sp|A5V3J3.1|MUTL_SPHWW RecName: Full=DNA mismatch repair protein MutL
gi|148498605|gb|ABQ66859.1| DNA mismatch repair protein MutL [Sphingomonas wittichii RW1]
Length = 594
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 84/190 (44%), Gaps = 12/190 (6%)
Query: 186 ANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNF 245
A+ P+ AE + +++ + GQ +I+ + + L I+DQHA E+
Sbjct: 380 ADFAPAPMARAEPAYSPPPQQASYPMGVARGQVAATYIVAEAEDGLVIVDQHAAHERLVL 439
Query: 246 ETLQKTTL---IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLT 302
E +++ + Q L++P+ + L ++ L+ + + G E + +L+
Sbjct: 440 ERMRRAMADGGVARQALLLPEVVELDEVGCDRLETRIAELAEMGLEL--ERFGPKAMLVR 497
Query: 303 SLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPS---RIRAMFASRACRKSVMIGRALSV 359
+ P LG+ D+ L+ L + S R+ + A+ AC SV GR LSV
Sbjct: 498 ATP----ALLGQGDVHGLIVDLADELAAYDEALSLKERLDHVAATMACHGSVRAGRTLSV 553
Query: 360 GEMTGLVRNM 369
EM L+R M
Sbjct: 554 AEMNALLREM 563
>gi|429761466|ref|ZP_19293891.1| DNA mismatch repair protein [Anaerostipes hadrus DSM 3319]
gi|429183719|gb|EKY24760.1| DNA mismatch repair protein [Anaerostipes hadrus DSM 3319]
Length = 645
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 77/167 (46%), Gaps = 7/167 (4%)
Query: 213 KIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKT---TLIKSQKLVVPQNLHLTK 269
KI+GQ + +++Y+ LFI+DQHA EK N+E L K I SQ+L P + ++
Sbjct: 458 KILGQLFKTYWLIEYEDQLFIMDQHAAHEKVNYERLMKNFKEKEIYSQRLEPPMVVTVSM 517
Query: 270 INQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNS 329
L F G F+ +S + +P + R+ ELL + N
Sbjct: 518 TEAEALTRYKDAF--AGLGFTIESFGGNEYCIREVPANLYGIGERDLFMELLDAVSQENG 575
Query: 330 TEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
T I + A+ AC+ S+ + +S+ E+ L+ + +++ P+
Sbjct: 576 T--LDTEVIASKIATMACKMSIKGNQRVSLMEVEHLLDELMKLENPY 620
>gi|358465302|ref|ZP_09175252.1| DNA mismatch repair protein [Streptococcus sp. oral taxon 058 str.
F0407]
gi|357065797|gb|EHI75972.1| DNA mismatch repair protein [Streptococcus sp. oral taxon 058 str.
F0407]
Length = 649
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 78/371 (21%), Positives = 157/371 (42%), Gaps = 47/371 (12%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMNQ 74
++P +++I + DVNV P K+++ + E+ L+ V I +S Q
Sbjct: 280 RFPLAVIHIHIDPYLADVNVHPTKQEVRISKERELMTLVSEAIANSLK----------EQ 329
Query: 75 SMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPDETI 134
++ P + ++ K N ++VE T+P+ ++N+ + E EP P +
Sbjct: 330 TL--IPDALENLAKSTVRNRQKVEQTTLPL--KENTLYY---------EQTEPPRPSQA- 375
Query: 135 EVIDDMPRLQGSYRQSTPVTL----SLDIIQDQLKARYARRTVQAQDRCVENRFHANIDP 190
EV D L + +TL +LD + K +A R + D+ H +D
Sbjct: 376 EVADHQVELS---EEGQDLTLFAKETLDQLTKPAKLHFAERKPASYDQLD----HPELDL 428
Query: 191 SKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQK 250
+ +A +L R + S F +++ GQ + ++ + L+IIDQHA E+ +E ++
Sbjct: 429 ASLDKAYDKLERE-ESSSFPELEFFGQMHGTYLFAQGRDGLYIIDQHAAQERVKYEEYRE 487
Query: 251 TTL---IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMS 307
+ Q+L+VP + L++ +P+ + G + + +L P+
Sbjct: 488 SIGNVDQSQQQLLVPYIFEFPADDALRLRERMPLLEEVGVFLA--EYGENQFILREHPI- 544
Query: 308 KNTTLGREDIEELLF-MLQHTNSTEHCRPSRIRAMFA-SRACRKSVMIGRALSVGEMTGL 365
+ E+IE ++ M T+ + RA A +C++S+ + L
Sbjct: 545 ---WMAEEEIESGIYEMCDMLLLTKEVSIKKYRAELAIMMSCKRSIKANHRIDDHSARQL 601
Query: 366 VRNMGRIDQPW 376
+ + + D P+
Sbjct: 602 LYQLSQCDNPY 612
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.132 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,621,286,907
Number of Sequences: 23463169
Number of extensions: 228687417
Number of successful extensions: 719600
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 965
Number of HSP's successfully gapped in prelim test: 2435
Number of HSP's that attempted gapping in prelim test: 713824
Number of HSP's gapped (non-prelim): 5549
length of query: 380
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 236
effective length of database: 8,980,499,031
effective search space: 2119397771316
effective search space used: 2119397771316
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 78 (34.7 bits)