BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13670
(380 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P54279|PMS2_MOUSE Mismatch repair endonuclease PMS2 OS=Mus musculus GN=Pms2 PE=1 SV=1
Length = 859
Score = 226 bits (576), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 108/198 (54%), Positives = 142/198 (71%), Gaps = 7/198 (3%)
Query: 183 RFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEK 242
+F A I P +N+ AE EL + I KSMF +M+I+GQFNLGFI+ K DLF++DQHA DEK
Sbjct: 644 KFRAKICPGENQAAEDELRKEISKSMFAEMEILGQFNLGFIVTKLKEDLFLVDQHAADEK 703
Query: 243 YNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVL-- 300
YNFE LQ+ T++++Q+L+ PQ L+LT +N+ +L +NL +F KNGF+F D +D V
Sbjct: 704 YNFEMLQQHTVLQAQRLITPQTLNLTAVNEAVLIENLEIFRKNGFDFVID--EDAPVTER 761
Query: 301 --LTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALS 358
L SLP SKN T G +DI+EL+FML + CRPSR+R MFASRACRKSVMIG AL+
Sbjct: 762 AKLISLPTSKNWTFGPQDIDELIFMLSDSPGV-MCRPSRVRQMFASRACRKSVMIGTALN 820
Query: 359 VGEMTGLVRNMGRIDQPW 376
EM L+ +MG +D PW
Sbjct: 821 ASEMKKLITHMGEMDHPW 838
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 67/112 (59%), Gaps = 13/112 (11%)
Query: 1 MKLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
+ L YH +N HQYPF++LN+ + + VD+NVTPDKRQI + EKLLLA +K +
Sbjct: 303 LSLSMRFYHMYNRHQYPFVVLNVSVDSECVDINVTPDKRQILLQEEKLLLAVLKTSL--- 359
Query: 61 YAIG-FTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPS-EDNS 110
IG F D N +N + Q P DV+ + + ++ E+E PVP +DNS
Sbjct: 360 --IGMFDSDANKLN--VNQQPLLDVEGNLV-KLHTAELEK---PVPGKQDNS 403
>sp|P54278|PMS2_HUMAN Mismatch repair endonuclease PMS2 OS=Homo sapiens GN=PMS2 PE=1 SV=2
Length = 862
Score = 224 bits (572), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 105/196 (53%), Positives = 141/196 (71%), Gaps = 3/196 (1%)
Query: 183 RFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEK 242
+F A I P +N+ AE EL + I K+MF +M+I+GQFNLGFII K + D+FI+DQHATDEK
Sbjct: 647 KFRAKICPGENQAAEDELRKEISKTMFAEMEIIGQFNLGFIITKLNEDIFIVDQHATDEK 706
Query: 243 YNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSD--DGNVL 300
YNFE LQ+ T+++ Q+L+ PQ L+LT +N+ +L +NL +F KNGF+F D +
Sbjct: 707 YNFEMLQQHTVLQGQRLIAPQTLNLTAVNEAVLIENLEIFRKNGFDFVIDENAPVTERAK 766
Query: 301 LTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVG 360
L SLP SKN T G +D++EL+FML + CRPSR++ MFASRACRKSVMIG AL+
Sbjct: 767 LISLPTSKNWTFGPQDVDELIFMLSDSPGV-MCRPSRVKQMFASRACRKSVMIGTALNTS 825
Query: 361 EMTGLVRNMGRIDQPW 376
EM L+ +MG +D PW
Sbjct: 826 EMKKLITHMGEMDHPW 841
Score = 85.5 bits (210), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 57/85 (67%), Gaps = 8/85 (9%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
+LVNEVYH +N HQYPF++LNI + + VD+NVTPDKRQI + EKLLLA +K +
Sbjct: 304 RLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSL---- 359
Query: 62 AIG-FTVDGNNMNQSMEQDPSSDVD 85
IG F D N +N S Q P DV+
Sbjct: 360 -IGMFDSDVNKLNVS--QQPLLDVE 381
>sp|P14242|PMS1_YEAST DNA mismatch repair protein PMS1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=PMS1 PE=1 SV=3
Length = 873
Score = 181 bits (458), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 98/223 (43%), Positives = 146/223 (65%), Gaps = 14/223 (6%)
Query: 163 QLKARYARRTVQAQDRCVENRFHANIDPSKN-KEAESELNRVIKKSMFEKMKIVGQFNLG 221
Q+ + ++R +AQ+ ++N+ D ++ ++ E L + K+ F+KM++VGQFNLG
Sbjct: 629 QMSSIISKRKSEAQENIIKNK-----DELEDFEQGEKYLTLTVSKNDFKKMEVVGQFNLG 683
Query: 222 FIIV--KYDS--DLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKD 277
FIIV K D+ DLFI+DQHA+DEKYNFETLQ T+ KSQKL++PQ + L+ I++ ++ D
Sbjct: 684 FIIVTRKVDNKYDLFIVDQHASDEKYNFETLQAVTVFKSQKLIIPQPVELSVIDELVVLD 743
Query: 278 NLPVFYKNGFEFSFDSSDD--GNVLLTSLPMSKNTTLGREDIEELLFMLQHTNST--EHC 333
NLPVF KNGF+ D ++ V L SLP SK T D EL+ +++ ++
Sbjct: 744 NLPVFEKNGFKLKIDEEEEFGSRVKLLSLPTSKQTLFDLGDFNELIHLIKEDGGLRRDNI 803
Query: 334 RPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
R S+IR+MFA RACR S+MIG+ L+ MT +V N+ +D+PW
Sbjct: 804 RCSKIRSMFAMRACRSSIMIGKPLNKKTMTRVVHNLSELDKPW 846
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 8/154 (5%)
Query: 1 MKLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
+K NEVY FNN Q+P + LN+E+ +DVNVTPDKR I + +E+ ++ K ++D
Sbjct: 296 LKCCNEVYKTFNNVQFPAVFLNLELPMSLIDVNVTPDKRVILLHNERAVIDIFKTTLSDY 355
Query: 61 YAIGFTVDGNNMNQSMEQDPSSDVDMEKI-QRSNSEEVEHETIPVPSEDNSNFSHEANLQ 119
Y M EQ + E RS + E ++E + SN S+ A+
Sbjct: 356 YNRQELALPKRMCSQSEQQAQKRLKTEVFDDRSTTHESDNENYHTARSE-SNQSNHAHFN 414
Query: 120 QSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPV 153
+ ++ E V+D G+Y T V
Sbjct: 415 STTGVIDKSNGTELTSVMD------GNYTNVTDV 442
>sp|Q54QA0|PMS1_DICDI Mismatch repair endonuclease pms1 OS=Dictyostelium discoideum
GN=pms1 PE=3 SV=1
Length = 1022
Score = 149 bits (375), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 118/190 (62%), Gaps = 6/190 (3%)
Query: 194 KEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKT-- 251
K AE EL + KK F++M ++GQFNLGFII K +DLFIIDQHA DEKYNFE L K+
Sbjct: 796 KTAEEELTKFFKKEYFKQMIVIGQFNLGFIIAKLGNDLFIIDQHAADEKYNFEILSKSVE 855
Query: 252 TLIKSQKLVVPQNLH-LTKINQCILKDNLPVFYKNGFEF--SFDSSDDGNVLLTSLPMSK 308
+ I SQ L+ P L LT + I+ +N+ +F KNGF+F D+ + L++ P+
Sbjct: 856 SSINSQPLLKPDTLSDLTSEEELIIIENVDLFKKNGFKFIIDHDAPTRFKIKLSAFPIIH 915
Query: 309 NTTLGREDIEELLFMLQHTNSTEHC-RPSRIRAMFASRACRKSVMIGRALSVGEMTGLVR 367
+ G +DI E +FM++ ++ + R+ ++ AS+ACRKS+M+G L+ EM ++
Sbjct: 916 GQSFGIKDIYEWIFMIKESSIPGSVNKIPRLNSLLASKACRKSIMVGTTLTHKEMKDVLN 975
Query: 368 NMGRIDQPWV 377
N+ +D PW
Sbjct: 976 NLSTLDNPWC 985
Score = 52.4 bits (124), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 2 KLVNEVYHQFNNH-QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATV 53
K +N +Y F+ YP +I NIEM ++ DVNVTPDKR IF+ E+ LL +
Sbjct: 313 KEINSLYQSFHKRGSYPVVIFNIEMPTNNYDVNVTPDKRTIFIQKEQQLLLLI 365
>sp|P54280|PMS1_SCHPO DNA mismatch repair protein pms1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=pms1 PE=3 SV=1
Length = 794
Score = 147 bits (372), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 117/186 (62%), Gaps = 11/186 (5%)
Query: 197 ESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKS 256
E LN + K+ F +M++VGQFN GFI+V + ++LFIIDQHA+DEK+N+E L+ +I S
Sbjct: 596 EDHLNLTVHKADFLRMRVVGQFNRGFIVVVHGNNLFIIDQHASDEKFNYEHLKSNLVINS 655
Query: 257 QKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDD-GN-VLLTSLPMSKNTTLGR 314
Q LV+P+ L L + +L D++ + + GF + D + GN L S+P SKN
Sbjct: 656 QDLVLPKRLDLAATEETVLIDHIDLIRRKGFGVAIDLNQRVGNRCTLLSVPTSKNVIFDT 715
Query: 315 EDIEELLFMLQHTNSTEHCR----PSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMG 370
D+ E++ +L +EH + SR+ M AS+ACR SVMIGRAL++ EM +VR++
Sbjct: 716 SDLLEIISVL-----SEHPQIDPFSSRLERMLASKACRSSVMIGRALTISEMNTIVRHLA 770
Query: 371 RIDQPW 376
+ +PW
Sbjct: 771 ELSKPW 776
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 35/53 (66%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVK 54
+++ EV+ ++ Q PF +N+ ++ ++D+NV+PDK+ +F+ E ++ +K
Sbjct: 272 RVIQEVFKPYSMAQSPFFAINLRITNGTIDINVSPDKKSVFLSEEDSIIEFIK 324
>sp|Q8XL86|MUTL_CLOPE DNA mismatch repair protein MutL OS=Clostridium perfringens (strain
13 / Type A) GN=mutL PE=3 SV=1
Length = 674
Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 94/404 (23%), Positives = 187/404 (46%), Gaps = 53/404 (13%)
Query: 4 VNEVYHQFN-NHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATV--------K 54
V + FN ++PF +L I+ + +DVN+ P K +I E+ + V +
Sbjct: 268 VENAFRSFNVTGKFPFFVLFIDTYPELIDVNIHPTKSEIKFKDERFIFKVVFDAVHSAMR 327
Query: 55 VHITDSYAI------GF-TVDGNNMNQSMEQDPSSDVDM-EKIQRSNSEEVEHETIPV-- 104
++ D++ + F + + +S++++ S+ + E I SE+ + E I
Sbjct: 328 EYVKDTFTLPEEEEKKFEALKEEVIQESLDKEISTLEKLKENINYKVSEDKKKEEIYSYN 387
Query: 105 PSEDNSNFSHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQ-STPVTLSLD--IIQ 161
PS+D + + + + + + DE+ + + + +++ S +S D +I+
Sbjct: 388 PSKD---YEAKTEVNIPVDFLSKENQDESFSINNSLE--NNEFKEVSAKREISYDPILIK 442
Query: 162 DQLKARYARRTVQAQDR----CVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQ 217
++LK + + T ++ +R C +N + +I+ +EA+ F K++++GQ
Sbjct: 443 NELKDKVSESTSESLERSDYKCNKNEYGNSIEEIIYREAK-----------FPKLRVIGQ 491
Query: 218 FNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKS---QKLVVPQNLHLTKINQCI 274
FN +I+ +YDS L++IDQHA EK FE K Q L++P + L +
Sbjct: 492 FNKTYILAEYDSTLYLIDQHAAHEKILFEKYSSDIAKKKVEIQPLMIPLVVTLPTEDYLY 551
Query: 275 LKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQH--TNSTEH 332
+N +F K GF+ S D ++ + +P + E I ++ L+ T T
Sbjct: 552 YDENKEIFEKAGFKIS--DFGDNSIRIEEVPYFLDKLNPTELITSMINNLKKMGTGETVE 609
Query: 333 CRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+ ++I AS +CR +V LS+ EM L+ ++ I+ P+
Sbjct: 610 VKYNKI----ASMSCRAAVKANDVLSILEMENLIEDLRYINDPF 649
>sp|Q0TRD5|MUTL_CLOP1 DNA mismatch repair protein MutL OS=Clostridium perfringens (strain
ATCC 13124 / NCTC 8237 / Type A) GN=mutL PE=3 SV=1
Length = 674
Score = 81.6 bits (200), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 94/406 (23%), Positives = 188/406 (46%), Gaps = 57/406 (14%)
Query: 4 VNEVYHQFN-NHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATV--------K 54
V + FN ++PF +L I+ + +DVN+ P K +I E+ + V +
Sbjct: 268 VENAFRSFNVTGKFPFFVLFIDTYPELIDVNIHPTKSEIKFKDERFIFKVVFDAVHSAMR 327
Query: 55 VHITDSYAI------GF-TVDGNNMNQSMEQDPSSDVDM-EKIQRSNSEEVEHETIPV-- 104
++ D++ + F + + +S++++ S+ + E I SE+ + E I
Sbjct: 328 EYVKDTFTLPEEEEKKFEALKEEVIQESLDEEISTLEKLKENINYKVSEDRKKEEIYSYN 387
Query: 105 PSEDNSNFSHEANLQQSPETVEPDTPDETIEVIDDMPR---LQGSYRQSTPVTLSLD--I 159
PS+D + + + + + + +E+ + + + +GS ++ +S D +
Sbjct: 388 PSKD---YEAKTEVNIPVDFLSKENQEESFSINNSLENNNFKEGSAKRE----ISYDPIL 440
Query: 160 IQDQLKARYARRTVQAQDR----CVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIV 215
I+++LK + + T ++ +R C +N + +I+ +EA+ F K++++
Sbjct: 441 IKNELKDKVSESTSESLERSDYKCNKNEYGNSIEEIIYREAK-----------FPKLRVI 489
Query: 216 GQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKS---QKLVVPQNLHLTKINQ 272
GQFN +I+ +YDS L++IDQHA EK FE K Q L++P + L +
Sbjct: 490 GQFNKTYILAEYDSTLYLIDQHAAHEKILFEKYSSDIAKKRVEIQPLMIPLVVTLPTEDY 549
Query: 273 CILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQH--TNST 330
+N +F K GF+ S D ++ + +P + E I ++ L+ T T
Sbjct: 550 LYYDENKEIFEKAGFKIS--DFGDNSIRIEEVPYFLDKLNPTELITSMINNLKKMGTGET 607
Query: 331 EHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+ ++I AS +CR +V LS+ EM L+ ++ I+ P+
Sbjct: 608 VEVKYNKI----ASMSCRAAVKANDVLSILEMENLIEDLRYINDPF 649
>sp|Q0STR3|MUTL_CLOPS DNA mismatch repair protein MutL OS=Clostridium perfringens (strain
SM101 / Type A) GN=mutL PE=3 SV=1
Length = 674
Score = 81.6 bits (200), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 94/403 (23%), Positives = 177/403 (43%), Gaps = 51/403 (12%)
Query: 4 VNEVYHQFN-NHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYA 62
V + FN ++PF +L I+ + +DVN+ P K +I E+ + V
Sbjct: 268 VENAFRSFNVTGKFPFFVLFIDTYPELIDVNIHPTKSEIKFKDERFIFKLV--------- 318
Query: 63 IGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHET----IPVPSEDNSNFSHEANL 118
F + M + ++ + + EK + EEV E+ I + N +++ +
Sbjct: 319 --FDAVHSAMREYVKDTFTLPEEEEKKFEALKEEVIQESLDKEISTLEKLKENINYKVSD 376
Query: 119 QQSPETVEPDTPDETIEV-------IDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARR 171
+ E + P + E +D + + + +S+ SL+ + K A+R
Sbjct: 377 DKRKEEIYSYNPSKDYEAKTEVNIPVDFLSK--ENQEESSKFNNSLE--NNDFKEVSAKR 432
Query: 172 TV---------QAQDRCVENRF----HANIDPSKNKEAESELNRVIKKSMFEKMKIVGQF 218
+ + +D+ EN + ++ +KN+ S R+ +++ F K+K++GQF
Sbjct: 433 EISYDPILIKNELKDKVSENTYDSLESSDYKCNKNEYGNSLEERIYREAKFPKLKVIGQF 492
Query: 219 NLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKS---QKLVVPQNLHLTKINQCIL 275
N +I+ +YDS L++IDQHA EK FE K Q L++P + L +
Sbjct: 493 NKTYILAEYDSTLYLIDQHAAHEKILFEKYSSDIAKKKVEIQPLMIPLVVTLPTEDYLYY 552
Query: 276 KDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQH--TNSTEHC 333
+N +F K GF+ S D ++ + +P + E I ++ L+ T T
Sbjct: 553 DENKEIFEKAGFKIS--DFGDNSIRIEEVPYFLDKLNPTELIISMINNLKKMGTGETVEV 610
Query: 334 RPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+ ++I AS +CR +V LS+ EM L+ ++ I+ P+
Sbjct: 611 KYNKI----ASMSCRAAVKANDVLSILEMENLIEDLRYINDPF 649
>sp|A6TR78|MUTL_ALKMQ DNA mismatch repair protein MutL OS=Alkaliphilus metalliredigens
(strain QYMF) GN=mutL PE=3 SV=1
Length = 637
Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/367 (21%), Positives = 162/367 (44%), Gaps = 37/367 (10%)
Query: 14 HQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMN 73
++YP +LNI++ + D+NV P K +I EK + + ++T + T+ M
Sbjct: 279 NKYPICVLNIKIDPEDADINVHPSKTEIKFHKEKEIYHYIYNYVTQVLSESSTISEIMMI 338
Query: 74 QSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPDET 133
S + +++I S E+I V +D + E E +
Sbjct: 339 PSTKNQHQQHHHLKEINLSQENIQSKESIGVKQQDKVMVADEQ---------EKVKEYNS 389
Query: 134 IEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKN 193
V+D P++ Q P+ +L QL ++ + + VE+R
Sbjct: 390 QYVMDSRPKV-----QPPPMVNTLKTEDTQLNV----ASIISNELPVESR---------G 431
Query: 194 KEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNF----ETLQ 249
+L + K+ + K+VGQ +I+++ D +++IDQHA EK + E L+
Sbjct: 432 IRTNPQLQKNFIKTYLQNYKVVGQLFNTYIVIEKDQSVYLIDQHAAHEKLLYIQFHEELK 491
Query: 250 KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKN 309
K T + SQ+L+ P L + + L +N+ F GFE ++ ++++ ++P+ +
Sbjct: 492 KET-VASQQLLTPVVLEFSHEDYITLIENISEFIPLGFE--LEAFGQNSIIIRAVPLLLD 548
Query: 310 TTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
+D + ++ + +H +P IR R+C++++ L + E+ L+R++
Sbjct: 549 KP---KDYNFIFELIDQVKNEKHVKPDYIREKIIQRSCKEAIKAMDILDIQEIQQLIRDL 605
Query: 370 GRIDQPW 376
+++ P
Sbjct: 606 EKLEPPL 612
>sp|C1FNT8|MUTL_CLOBJ DNA mismatch repair protein MutL OS=Clostridium botulinum (strain
Kyoto / Type A2) GN=mutL PE=3 SV=1
Length = 666
Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 181/391 (46%), Gaps = 56/391 (14%)
Query: 14 HQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATV--KVH--ITDSYAIGFTVDG 69
+ YPF ++ I++ + +DVNV P K ++ E+ + T+ VH I FT
Sbjct: 279 NSYPFFVIFIDIFPEYIDVNVHPTKSEVKFKDERAMFKTIFDAVHEAIKGELKESFT--- 335
Query: 70 NNMNQSMEQDPSSDVDMEKIQRSNSEEV--EHETIPVPSEDNSN-----FSHEANLQQSP 122
N N+ D++M ++S +E + E E + +P + NSN F + N+ + P
Sbjct: 336 NFFNKE-------DINMYDSEKSIAETIKLEKEEVQIPIDLNSNNKIDIFGN--NINKLP 386
Query: 123 ETVE--PDTPDETIEVIDDMPRLQGSYRQSTPVTLSLD-IIQDQLKARYAR--RTVQAQD 177
E + + +++ S + T D + K Y++ + +Q +
Sbjct: 387 NNAELLKNIGIKEKNTLENNNNFYTSKQNEICYTNKNDECLNSCNKDDYSKIEKPLQKDN 446
Query: 178 RCVE----NRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFI 233
+ ++ N + N P KE + + + MKI+GQFN +I+++ D +L+I
Sbjct: 447 KNLDALYLNEHNTNSSPINIKENKPN-------NFYVDMKIIGQFNNTYILIEKDKELYI 499
Query: 234 IDQHATDEKYNFETLQ---KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFS 290
IDQHA EK FE + + + SQ L+ P + L++ I ++N +F +G FS
Sbjct: 500 IDQHAAHEKVLFEKFKSEIEKGYVISQILLSPVVIELSEDEFNIYEENKDIFKNSG--FS 557
Query: 291 FDSSDDGNVLLTSLPMSKNTTLGREDIEEL----LFMLQHTNSTEHCRPSRIRA-MFASR 345
++ + + + +P+ LG+ ++E+L L+ L++ S E S I+ A+
Sbjct: 558 VETFGECTINIKEVPL----ILGKPNVEDLFMDILYNLKNMKSKE---TSTIKYNAIATL 610
Query: 346 ACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
AC+ +V L E+ L+ NM ++ P+
Sbjct: 611 ACKSAVKANDNLKEEEIKKLIENMLTLNNPY 641
>sp|Q97I20|MUTL_CLOAB DNA mismatch repair protein MutL OS=Clostridium acetobutylicum
(strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM
B-1787) GN=mutL PE=3 SV=1
Length = 622
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 162/370 (43%), Gaps = 57/370 (15%)
Query: 14 HQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHE----KLLLATVKVHITDSYAIGFTVDG 69
+++PF I+ +++ + VDVNV P K ++ +E K++ TV I +S F V+
Sbjct: 278 NKFPFFIIFLDIFPEFVDVNVHPTKSEVKFQNERDIFKIIFDTVHEGIRNSLKESFKVEA 337
Query: 70 NNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDT 129
E+D D+ + I ++ E++H+ D
Sbjct: 338 ----LKEEEDKLFDIKEDVITKN---EIKHD---------------------------DK 363
Query: 130 PDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANID 189
D I+ + S PV + + I + Y T + +DR ++ +I
Sbjct: 364 IDGYIK------------KDSFPVPVQIPIDLKRPIENYDNSTKENKDRSFDDFREKDII 411
Query: 190 PSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQ 249
++E E+ KK+ F +++++GQFN +I+ + +L+IIDQHA EK FE +
Sbjct: 412 KETSQEKETYDIITNKKAKFPELRVIGQFNNTYILAESFEELYIIDQHAAHEKILFEKYR 471
Query: 250 ---KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPM 306
K + SQ L+ P + L + +N VF GF + D V + +P+
Sbjct: 472 EDIKNKGVSSQILITPSVVELLPEDFIYYDENKEVFKNAGFVIEY--FGDNTVAIKEVPL 529
Query: 307 SKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLV 366
L ++ E++ L++ S E + R++ A+ AC+ +V L+ EM L+
Sbjct: 530 FLGKPLVKDLFLEIIDNLKNMGSGE-TSEVKYRSI-ATAACKSAVKAYHELTHDEMKTLI 587
Query: 367 RNMGRIDQPW 376
+++ + P+
Sbjct: 588 QDLRFAEDPF 597
>sp|B2TIB8|MUTL_CLOBB DNA mismatch repair protein MutL OS=Clostridium botulinum (strain
Eklund 17B / Type B) GN=mutL PE=3 SV=1
Length = 672
Score = 72.8 bits (177), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 84/392 (21%), Positives = 182/392 (46%), Gaps = 31/392 (7%)
Query: 4 VNEVYHQFNN-HQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLL--------ATVK 54
V + + F+ ++PF IL IE+ + +DVN+ P K ++ + E+ + ++K
Sbjct: 268 VEQAFKSFSTVSKFPFFILFIEIYPEYIDVNIHPTKSEVKFNDERFIFKKIFGAVHTSLK 327
Query: 55 VHITDSYAIGFTVD---GNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSN 111
+ +++I V+ N N ++E+ + ++ + N+ + + I +NS
Sbjct: 328 EEVFSTFSIPEEVNEAISKNTNLNIEEITFKIEEEQEKVKFNTNHLSQKNICSTQGNNSI 387
Query: 112 FSHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARR 171
H + + +T P + +++ D +L+ S P + ++I D + +Y
Sbjct: 388 NKHIYDEKHKTDTNIPLNVNIPVDLKSDHIKLEDD-NNSIP---NKEVICDNNEVKYESS 443
Query: 172 TVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSM--FEKMKIVGQFNLGFIIVKYDS 229
++ EN +++D ++K + + ++K+ + F +KI+GQ+N +I+ +Y
Sbjct: 444 YTSDSNQ-YENSCKSDVD-KESKSKTTGTSELVKEKIPKFPAIKIIGQYNKTYILGEYAG 501
Query: 230 DLFIIDQHATDEKYNFETLQKTTL---IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNG 286
L++IDQHA EK FE + I Q L++P + L+ + ++N VF + G
Sbjct: 502 TLYMIDQHAAHEKIMFEKYLNDIICGDIIIQPLMIPTVIDLSMDDYSYFEENKDVFKEAG 561
Query: 287 FEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLF-MLQHTNSTEHCRPSRIRA-MFAS 344
F+ + ++ L +P LG+ + L +L + + + + ++ A+
Sbjct: 562 --FTIEDFGGTSIALKEVPY----FLGKLKPKNLFLEILDNLKNLGSGKTTEVKYNAIAT 615
Query: 345 RACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+AC+ +V +L EM L+ + ID P+
Sbjct: 616 KACKSAVKGNDSLDELEMVKLIEELRYIDDPF 647
>sp|A6LWJ1|MUTL_CLOB8 DNA mismatch repair protein MutL OS=Clostridium beijerinckii
(strain ATCC 51743 / NCIMB 8052) GN=mutL PE=3 SV=1
Length = 664
Score = 72.4 bits (176), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 93/396 (23%), Positives = 180/396 (45%), Gaps = 47/396 (11%)
Query: 4 VNEVYHQFNN-HQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLL--------ATVK 54
V + + F+ +++PF IL IE+ + VDVN+ P K +I + E+++ +K
Sbjct: 268 VEQAFKSFSTVNKFPFFILFIEVYPEYVDVNIHPTKAEIKFNDERMIFKKIFGAVHTALK 327
Query: 55 VHITDSYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSH 114
+ +++AI N E P+ E+I EE E S + S
Sbjct: 328 NEVFETFAIK-----EEENTKKEPLPT----FEEITFKIKEEEEKVKF-ASSAAKTLISQ 377
Query: 115 EANLQQSPETVEPDTPDETIEVIDDMPRLQGS-YRQST--PVTLSLDIIQDQLKARYARR 171
+L+ + E+ D ++ I+ + + Y + P+++ +D+ + Y
Sbjct: 378 GKDLKANNESSFKSVYDPSLNNINKTIVEESTDYNKENEEPISIPVDLKPNS----YIEN 433
Query: 172 TVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSM--FEKMKIVGQFNLGFIIVKYDS 229
V E+ +N +P +N E++ + + F + I+GQ+N +I+ +YD
Sbjct: 434 LVDDYSDNAEDEIKSNSEPIENVITENKYENIKPNPIAKFPPITIIGQYNKTYILGEYDG 493
Query: 230 DLFIIDQHATDEKYNFET----LQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKN 285
L++IDQHA EK FE +++ T+I Q L+VP + L+ + ++N +F +
Sbjct: 494 TLYMIDQHAAHEKILFEKYLKEIEEGTII-IQPLIVPSIIDLSIDDYSYFEENKDIFREA 552
Query: 286 GF---EFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLF-MLQHTNSTEHCRPSRIR-A 340
GF EF S + L +P LGR + + L +L + + + + S ++
Sbjct: 553 GFLLEEFGGSS-----LSLKEVPY----FLGRLNPKNLFLDILDNLKNLGNGKTSEVKHN 603
Query: 341 MFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
A++AC+ ++ L + EM L+ ++ ID P+
Sbjct: 604 AIATKACKAAIKGNDKLEMNEMIKLIEDLRYIDDPF 639
>sp|Q5GSP0|MUTL_WOLTR DNA mismatch repair protein MutL OS=Wolbachia sp. subsp. Brugia
malayi (strain TRS) GN=mutL PE=3 SV=1
Length = 628
Score = 72.4 bits (176), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 167/384 (43%), Gaps = 76/384 (19%)
Query: 7 VYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGF 65
YH F +++YPF L++E+ D +DVNV P+K ++ +++L+ V+ + + +
Sbjct: 269 AYHDFIPSNRYPFATLHLEIPYDQIDVNVHPNKSEVRFQNKRLIYEIVRRGLIKALS--- 325
Query: 66 TVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVP---SEDNSNFSHEANLQQSP 122
T GN+ + I RS + + ET +P SE N +H N
Sbjct: 326 TRTGNSA-------------VSNIDRSRCQGIGKETSGLPFDVSESQGNDNHINN----G 368
Query: 123 ETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQD---RC 179
++ E + E E R+ P +++L +V +D R
Sbjct: 369 KSRETKSERELYE------------RRPNP-------FENRLMKESNSPSVGKKDLSERS 409
Query: 180 VENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGF---------IIVKYDSD 230
V F + I S ++ L R E++ ++ LGF II +
Sbjct: 410 V--LFDSGIQKSLSQAKTVVLER-------EQIDLIENHPLGFARCQVYNTYIIAEARGK 460
Query: 231 LFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFS 290
L I+DQHA E+ +E L++ + IK QKL++ + + + NQ + + + V+ FE
Sbjct: 461 LIIVDQHAAHERLVYECLKQKSSIKRQKLLLSEVVEIK--NQAGM-EMVEVYKDKLFEMG 517
Query: 291 FD--SSDDGNVLLTSLPMSKNTTLGREDIEELLF-MLQHTNSTEHCRP--SRIRAMFASR 345
FD + + V++ +P LG D++E+L ++ E P ++ + A+
Sbjct: 518 FDIQINSENKVIVKEIP----AILGTIDVKEMLIDIVDRLMEIEDMLPIEDKVNKILATI 573
Query: 346 ACRKSVMIGRALSVGEMTGLVRNM 369
AC S+ GR + + EM L+R M
Sbjct: 574 ACHGSIRAGRTMKLEEMNVLLRQM 597
>sp|B0TB10|MUTL_HELMI DNA mismatch repair protein MutL OS=Heliobacterium modesticaldum
(strain ATCC 51547 / Ice1) GN=mutL PE=3 SV=1
Length = 660
Score = 72.4 bits (176), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 92/407 (22%), Positives = 172/407 (42%), Gaps = 79/407 (19%)
Query: 4 VNEVYH-QFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEK--------LLLATVK 54
V E YH ++PF +L++E+ ++DVN P K++I D E+ +L T++
Sbjct: 269 VEEAYHGMLPGGRFPFFVLHLELPPQTIDVNSHPTKQEIKFDRERDVADFTRQTVLQTLR 328
Query: 55 VHITDS--YAIG-FTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSN 111
+++ F DG Q + SSDV +++ E + I + E +
Sbjct: 329 SRPLSRPLWSLASFQSDGAPPTQQL----SSDVR----EKAEGERWRQDRILLYREGALS 380
Query: 112 FSHEANLQQSPETVEPDTPDETIEVID--DMPRLQGSYRQSTPVTLSLDIIQDQLKARYA 169
+ + L +SPE E +E ++ D + + YR+S+ L D +++ L+
Sbjct: 381 PTKQ-ELPKSPER------SERVERLNSGDFGQGRALYRESSQ-ELPTDCLRESLE---- 428
Query: 170 RRTVQAQDRCVENRFHANI-----DPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFII 224
++Q + N+ +P KE + + ++ + E + I GQF +I+
Sbjct: 429 --ETESQSESIRQCLSENLPLHRQEPRAEKECQP-VEGLVAGDVAEWIPI-GQFRRSYIL 484
Query: 225 VKYDSDLFIIDQHATDEKYNFETLQKTTL-----IKSQKLVVPQNLHLTKINQCILKDNL 279
+ L+++DQHA E+ + L++ L SQ+L++P + LT
Sbjct: 485 AEGGDTLYLVDQHAAHERVLYHGLKERYLNEAGVCASQQLLLPVTVTLT----------- 533
Query: 280 PVFYKNGFEFSFDSSD--------DGNVLL-----TSLPMSKNTTLGREDIEELLFMLQH 326
P ++ E + D GN LL LP + R+ + L+ L+
Sbjct: 534 PAEFQGAMEAIAELRDAGLIVEHFGGNTLLIRAVPVGLPPGEEKGFFRDILNSLMKGLRD 593
Query: 327 TNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRID 373
RA +S ACR +V G+ +S EM L++ + R++
Sbjct: 594 REVIR-------RAALSSMACRGAVKAGQVMSHAEMGALLQQLARLE 633
>sp|A7FUK9|MUTL_CLOB1 DNA mismatch repair protein MutL OS=Clostridium botulinum (strain
ATCC 19397 / Type A) GN=mutL PE=3 SV=1
Length = 666
Score = 72.0 bits (175), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 185/398 (46%), Gaps = 70/398 (17%)
Query: 14 HQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATV--KVH--ITDSYAIGFTVDG 69
+ YPF ++ I++ + +DVNV P K ++ E+ + T+ VH I FT
Sbjct: 279 NSYPFFVIFIDIFPEYIDVNVHPTKSEVKFKDERAMFKTIFDAVHEAIKGELKESFT--- 335
Query: 70 NNMNQSMEQDPSSDVDMEKIQRSNSE--EVEHETIPVPSEDNSN-----FSHEANLQQSP 122
N N+ D+++ ++S +E ++E E + +P + NSN F + N+ + P
Sbjct: 336 NFFNKE-------DINIYDSEKSITEPIKLEKEEVQIPIDLNSNNKIDIFGN--NINKLP 386
Query: 123 ETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVEN 182
E + + G ++T + Q + YA + + + C ++
Sbjct: 387 NNTE-------------LLKNIGIKEKNTLENNNDFYTSKQNEIYYANKNDECLNSCNKD 433
Query: 183 RFHANIDPSKNKEAES-------ELNRV-----IKKS----MFEKMKIVGQFNLGFIIVK 226
+ + I+ S K+ ++ E NR IK++ + MKI+GQFN +I+++
Sbjct: 434 NY-SKIEKSLQKDNKNPDILYLNEHNRNSSPINIKENKSNNFYVDMKIIGQFNNTYILIE 492
Query: 227 YDSDLFIIDQHATDEKYNFETLQ---KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFY 283
D +L+IIDQHA EK FE + + + SQ L+ P + L++ I ++N +F
Sbjct: 493 KDKELYIIDQHAAHEKVLFEKFKCEIEKGYVISQILLSPVVIELSEDEFNIYEENKDIFK 552
Query: 284 KNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEEL----LFMLQHTNSTEHCRPSRIR 339
+G FS ++ + + + +P+ LG+ ++E L L+ L++ S E S I+
Sbjct: 553 NSG--FSVETFGEYTINIKEVPL----ILGKPNVENLFMDILYNLKNMKSKE---TSTIK 603
Query: 340 A-MFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
A+ AC+ +V L E+ L+ +M ++ P+
Sbjct: 604 YNAIATLACKSAVKANDNLKEEEIKKLIEDMLILNNPY 641
>sp|C3KX34|MUTL_CLOB6 DNA mismatch repair protein MutL OS=Clostridium botulinum (strain
657 / Type Ba4) GN=mutL PE=3 SV=1
Length = 666
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 95/391 (24%), Positives = 184/391 (47%), Gaps = 56/391 (14%)
Query: 14 HQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATV--KVH--ITDSYAIGFTVDG 69
+ YPF ++ I++ + +DVNV P K ++ E+ + T+ VH I FT
Sbjct: 279 NSYPFFVIFIDIFPEYIDVNVHPTKSEVKFKDERAMFKTIFDAVHEAIKGELKESFT--- 335
Query: 70 NNMNQSMEQDPSSDVDMEKIQRSNSEEVE--HETIPVPSEDNSN-----FSHEANLQQSP 122
N N+ D+++ ++S +E ++ E + +P + NSN F + N+ + P
Sbjct: 336 NFFNKE-------DINIYDSEKSIAETIKPGKEEVQIPIDLNSNNKIDIFGN--NINKLP 386
Query: 123 ETVE----PDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQL-KARYAR--RTVQA 175
E D ++ I +++ S + T D + K Y++ + +Q
Sbjct: 387 NNTELLKNIDIKEKNI--LENNDNFYTSNQNEIYYTNKNDKCLNSCNKDDYSKIEKPLQK 444
Query: 176 QDRCVENRF--HANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFI 233
++ ++N + N + S E++ N + + MKI+GQFN +I+++ D +L+I
Sbjct: 445 DNKNLDNLYLNEHNTNSSSINIKENKPN-----NFYVDMKIIGQFNNTYILIEKDKELYI 499
Query: 234 IDQHATDEKYNFETLQ---KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFS 290
IDQHA EK FE + + + SQ L+ P + L++ I ++N +F +G FS
Sbjct: 500 IDQHAAHEKVLFEKFKSEIEKGYVVSQILLSPVVIELSEDEFNIYEENKDIFKNSG--FS 557
Query: 291 FDSSDDGNVLLTSLPMSKNTTLGREDIEEL----LFMLQHTNSTEHCRPSRIRA-MFASR 345
++ + + + +P+ LG+ ++E L L+ L++ S E S I+ A+
Sbjct: 558 VEAFGECTINIKEVPL----ILGKPNVENLFMDILYNLKNMKSKE---TSTIKYNAIATL 610
Query: 346 ACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
AC+ +V L E+ L+ +M ++ P+
Sbjct: 611 ACKSAVKANDNLKEEEIKKLIEDMLILNNPY 641
>sp|B1IM67|MUTL_CLOBK DNA mismatch repair protein MutL OS=Clostridium botulinum (strain
Okra / Type B1) GN=mutL PE=3 SV=1
Length = 666
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 95/398 (23%), Positives = 182/398 (45%), Gaps = 70/398 (17%)
Query: 14 HQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATV--KVH--ITDSYAIGFTVDG 69
+ YPF ++ I++ + +DVNV P K ++ E+ + T+ VH I FT
Sbjct: 279 NSYPFFVIFIDIFPEYIDVNVHPTKSEVKFKDERAMFKTIFDAVHEAIKGELKESFT--- 335
Query: 70 NNMNQSMEQDPSSDVDMEKIQRSNSE--EVEHETIPVPSEDNSN-----FSHEANLQQSP 122
N N+ D+++ ++S +E ++E E + +P + NSN F + N+ + P
Sbjct: 336 NFFNKE-------DINIYDSEKSITEPIKLEKEEVQIPIDLNSNNKIDIFGN--NINKLP 386
Query: 123 ETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVEN 182
E + + G ++T + Q + YA + + + C ++
Sbjct: 387 NNTE-------------LLKNIGVKAKNTLENNNDFYTSKQNEIYYANKNDECLNSCNKD 433
Query: 183 RFHANIDPSKNKEAE--------------SELNRVIKK--SMFEKMKIVGQFNLGFIIVK 226
+ + I+ S K+ + S +N K + + MKI+GQFN +I+++
Sbjct: 434 NY-SKIEKSLQKDNKNPDTLYLNEHNTNSSSINIKENKPNNFYVDMKIIGQFNNTYILIE 492
Query: 227 YDSDLFIIDQHATDEKYNFETLQ---KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFY 283
D +L+IIDQHA EK FE + + + SQ L+ P + L++ I ++N +F
Sbjct: 493 KDKELYIIDQHAAHEKVLFEKFKSEIEKGYVISQILLSPVVIELSEDEFNIYEENKDIFK 552
Query: 284 KNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEEL----LFMLQHTNSTEHCRPSRIR 339
+G FS ++ + + + +P+ LG+ ++E L L+ L++ S E S I+
Sbjct: 553 NSG--FSVETFGEYTINIKEVPL----ILGKPNVENLFMDILYNLKNMKSKE---TSTIK 603
Query: 340 A-MFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
A+ AC+ +V L E+ L+ +M ++ P+
Sbjct: 604 YNAIATLACKSAVKANDNLKEEEIKKLIEDMLILNNPY 641
>sp|Q01QW7|MUTL_SOLUE DNA mismatch repair protein MutL OS=Solibacter usitatus (strain
Ellin6076) GN=mutL PE=3 SV=1
Length = 660
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 152/394 (38%), Gaps = 71/394 (18%)
Query: 1 MKLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITD 59
+ ++ YH YPF +L +E + VDVNV P K ++ H L ++ I +
Sbjct: 294 LHALSSAYHNLMPASAYPFALLFLECDAEEVDVNVHPSKTEVRFRHGSFLHDFIRDSIRE 353
Query: 60 SYAIGFTVDGNNMNQSMEQDPS---SDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSH-- 114
ME P+ S V M ++ + S FS
Sbjct: 354 RL--------------MESRPAPTFSPVPMAAPPAQQGAQLPY----------SEFSQML 389
Query: 115 EANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQ 174
E Q + E EP E MP + R + P T LD ++
Sbjct: 390 ENEQQAASEMAEPAIAGEPA-----MPEF--NLRATAPPTPRLDFSAPPIEV-------- 434
Query: 175 AQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFII 234
A + +D E+ + S ++ +GQ + FII L+II
Sbjct: 435 APGPPPSGKLSRRLDMHGEFPLEAIPAPEMSLSALSDLRPLGQIHESFIIAAGRDGLWII 494
Query: 235 DQHATDEKYNFETLQK---TTLIKSQKLVVPQNLHLT---KINQCILKDNLPVFYKNGFE 288
DQH E+ FE + K +++Q+L++P L L+ +I+ + D L + +GFE
Sbjct: 495 DQHVAHERILFEQVLKQRAAGRVETQRLLMPMILQLSAEQQIDYARIADEL---HASGFE 551
Query: 289 FSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFML-------QHTNSTEHCRPSRIRAM 341
+ GN + + +G +D+E +LF + TNS + R R +
Sbjct: 552 ----TEPFGNRTIAV--KAAPAAVGPQDLERILFEILEIAENEMRTNSLDDLR----RNI 601
Query: 342 FASRACRKSVMIGRALSVGEMTGLVRNMGRIDQP 375
AS ACR ++ I L + +M L+R + D P
Sbjct: 602 CASIACRAAIKINMRLDLAKMEWLLRALAATDCP 635
>sp|B1KSA2|MUTL_CLOBM DNA mismatch repair protein MutL OS=Clostridium botulinum (strain
Loch Maree / Type A3) GN=mutL PE=3 SV=1
Length = 666
Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 92/389 (23%), Positives = 175/389 (44%), Gaps = 52/389 (13%)
Query: 14 HQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATV--KVH--ITDSYAIGFTVDG 69
+ YPF ++ I++ + +DVNV P K ++ E+ + T+ VH I FT
Sbjct: 279 NSYPFFVIFIDIFPEYIDVNVHPTKSEVKFKDERAMFKTIFDAVHEAIKGELKESFT--- 335
Query: 70 NNMNQSMEQDPSSDVDMEKIQRSNSEEV--EHETIPVPSEDNSN-----FSHEANLQQSP 122
N N+ D+++ ++S +E + E E + +P + NSN F + N +
Sbjct: 336 NFFNKE-------DINIYDSEKSIAETIKLEKEEVQIPIDLNSNNKIDIFGNNINKLPTN 388
Query: 123 ETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLD-IIQDQLKARYAR------RTVQA 175
V + + ++++ S + T D + K Y++ + +
Sbjct: 389 TEVLKNIGIKEKNILENNDNFYTSKQNEIYYTNKNDEYLNSCNKDDYSKIEKPLQKGNKN 448
Query: 176 QDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIID 235
D N + N KE +S + + MKI+GQFN +I+++ D +L+IID
Sbjct: 449 PDALYLNEHNTNSSSINIKENKSN-------NFYVDMKIIGQFNNTYILIEKDKELYIID 501
Query: 236 QHATDEKYNFETLQ---KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFD 292
QHA EK FE + + + SQ L+ P + L++ I ++N +F +G F+ +
Sbjct: 502 QHAAHEKVLFEKFKSEIEKGYVISQILLSPVVIELSEDEFNIYEENKDIFKNSG--FAVE 559
Query: 293 SSDDGNVLLTSLPMSKNTTLGREDIEEL----LFMLQHTNSTEHCRPSRIRA-MFASRAC 347
+ + + + +P+ LG+ ++E L L+ L++ S E S I+ A+ AC
Sbjct: 560 NFGESTINIKEVPL----ILGKPNVENLFMDILYNLKNMKSKE---TSTIKYNAIATLAC 612
Query: 348 RKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+ +V L E+ L+ +M ++ P+
Sbjct: 613 KSAVKANDNLKEEEIKKLIEDMLILNNPY 641
>sp|A7GE44|MUTL_CLOBL DNA mismatch repair protein MutL OS=Clostridium botulinum (strain
Langeland / NCTC 10281 / Type F) GN=mutL PE=3 SV=1
Length = 666
Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 97/401 (24%), Positives = 182/401 (45%), Gaps = 76/401 (18%)
Query: 14 HQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATV--KVH--ITDSYAIGFTVDG 69
+ YPF ++ I++ + +DVNV P K ++ E+ + T+ VH I FT
Sbjct: 279 NSYPFFVIFIDIFPEYIDVNVHPTKSEVKFKDERAMFKTIFDAVHGAIKGELKESFT--- 335
Query: 70 NNMNQSMEQDPSSDVDMEKIQRSNSE--EVEHETIPVPSEDNSN-----FSHEAN-LQQS 121
N N+ D+++ ++S +E ++E E + +P + NSN F + N L +
Sbjct: 336 NFFNKE-------DINIYDSEKSITEPIKLEKEEVQIPIDLNSNNKIDIFGNNINKLSNN 388
Query: 122 PETVEPDTPDE--TIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRC 179
E ++ E T+E +D Q + YA + + + C
Sbjct: 389 TELLKNIGIKEKNTLENNNDF------------------YTSKQNEIYYANKNDECLNSC 430
Query: 180 VENRFHANIDPSKNKEAE--------------SELNRVIKK--SMFEKMKIVGQFNLGFI 223
++ + + I+ S K+ + S +N K + + MKI+GQFN +I
Sbjct: 431 NKDNY-SKIEKSLQKDNKNPDTLYLNEHNTNSSSINIKENKPNNFYVDMKIIGQFNNTYI 489
Query: 224 IVKYDSDLFIIDQHATDEKYNFETLQ---KTTLIKSQKLVVPQNLHLTKINQCILKDNLP 280
+++ D +L+IIDQHA EK FE + + + SQ L+ P + L++ I ++N
Sbjct: 490 LIEKDKELYIIDQHAAHEKVLFEKFKSEIENRYVISQILLSPVVIELSEDEFNIYEENKD 549
Query: 281 VFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEEL----LFMLQHTNSTEHCRPS 336
+F +G FS ++ + + + +P+ LG+ ++E L L+ L++ S E S
Sbjct: 550 IFKNSG--FSVETFGEYTINIKEVPL----ILGKPNVENLFMDILYNLKNMKSKE---TS 600
Query: 337 RIRA-MFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
I+ A+ AC+ +V L E+ L+ +M ++ P+
Sbjct: 601 TIKYNAIATLACKSAVKANDNLKEEEIKKLIEDMLILNNPY 641
>sp|Q895H3|MUTL_CLOTE DNA mismatch repair protein MutL OS=Clostridium tetani (strain
Massachusetts / E88) GN=mutL PE=3 SV=1
Length = 620
Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 157/382 (41%), Gaps = 84/382 (21%)
Query: 14 HQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATV--KVHITDSYAIGFTVDGNN 71
+++PF ++ I++ + +DVNV P K +I +K++ + V VH
Sbjct: 279 NKFPFFVIFIDIFPEYIDVNVHPTKTEIKFKEDKIVFSFVFKTVH--------------- 323
Query: 72 MNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPD 131
E I++S +E E ++ D +
Sbjct: 324 ---------------ESIKKSLYKEFN------------------------EQIKEDVKE 344
Query: 132 ETIEVIDDMPRL-QGSYRQSTPVTL---SLDIIQDQLKARYARRTVQAQDRCVENRFHAN 187
+ E+I + P L Q + P+ L S+DI + L + ++ V++ + N
Sbjct: 345 DNKEIIKENPSLFQNVEKVQIPIDLKSASMDIERKSL----VNSVLCNENNIVKDNINKN 400
Query: 188 ID-PSKNKEAESELNRVIKK------SMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATD 240
I +K +E++L ++K+ S MKI+GQF+ +I+ + +L+IIDQHA
Sbjct: 401 IYIDTKENLSENKLKNILKENTEDMVSKLPDMKIIGQFDNTYILAESVKNLYIIDQHAAH 460
Query: 241 EKYNFETLQ---KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDG 297
EK FET + K +KSQ L+ P L L + DN +FYK GF +
Sbjct: 461 EKILFETYRDKIKKDEVKSQLLLQPIVLELDSEDFSYYVDNKELFYKTGFNIEVFGENTI 520
Query: 298 NVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMF---ASRACRKSVMIG 354
N+ +P +G+ DI LFM N I + A AC+ +V
Sbjct: 521 NI--REVPF----IMGKPDINN-LFMDIINNIKAMGSGETIEVKYDSIAMLACKSAVKAH 573
Query: 355 RALSVGEMTGLVRNMGRIDQPW 376
LS EM L+ ++ P+
Sbjct: 574 DKLSKEEMEALINDLRFAKDPF 595
>sp|C0R515|MUTL_WOLWR DNA mismatch repair protein MutL OS=Wolbachia sp. subsp. Drosophila
simulans (strain wRi) GN=mutL PE=3 SV=1
Length = 605
Score = 68.2 bits (165), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 90/181 (49%), Gaps = 21/181 (11%)
Query: 203 VIKKSMFEKMKIVGQFNLGF---------IIVKYDSDLFIIDQHATDEKYNFETLQKTTL 253
V++K + E++ ++ LGF II + L I+DQHA E+ +E L++ +
Sbjct: 401 VLEKKVLEQVDLIESHPLGFARCQVYNTYIIAEVRDKLIIVDQHAAHERLVYECLKQKSS 460
Query: 254 IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFD--SSDDGNVLLTSLPMSKNTT 311
IK QKL++P+ + + NQ + + + ++ FE FD + V++ +P
Sbjct: 461 IKRQKLLLPETVEIK--NQAGM-EMIEIYKDKLFEMGFDIEIKSENKVIVKEIP----AI 513
Query: 312 LGREDIEELLF-MLQHTNSTEHCRP--SRIRAMFASRACRKSVMIGRALSVGEMTGLVRN 368
LG D++E+L ++ E P ++ + A+ AC S+ GR + + EM L+R
Sbjct: 514 LGAIDVKEMLINIIDRLTEIEDTLPVEDKVNKILATIACHGSIRAGRKMRLDEMNELLRQ 573
Query: 369 M 369
M
Sbjct: 574 M 574
Score = 39.3 bits (90), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 4 VNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLL 49
V YH F + +YPF L++E+ D VDVNV P+K ++ ++KL+
Sbjct: 266 VRYAYHDFIPSDRYPFAALHLEIPYDQVDVNVHPNKSEVRFQNKKLI 312
>sp|B5EGD4|MUTL_GEOBB DNA mismatch repair protein MutL OS=Geobacter bemidjiensis (strain
Bem / ATCC BAA-1014 / DSM 16622) GN=mutL PE=3 SV=1
Length = 647
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 157/392 (40%), Gaps = 65/392 (16%)
Query: 6 EVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIG 64
+ Y F +YP + + IE++ VDVNV P K HE +VH D+
Sbjct: 270 QAYRNFLERGRYPVVAVFIEIAPGEVDVNVHPTK------HEVRFREQGRVH--DAIQ-- 319
Query: 65 FTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQ--QSP 122
N + +++ P ++R V P+E ++ + A L+ Q+P
Sbjct: 320 -----NAVESVLKETPW-------LKRPAVAAVSR-----PTEKDAA-AARAVLEGSQAP 361
Query: 123 ETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDII-----------QDQLKARYARR 171
V P P + +P Q +QS+ + + Q L+ +Y +
Sbjct: 362 LPVTPQ-PRPALTSEKPVPAPQAQPQQSSISEARVAEVRELLVDFQPRPQPSLRPQY-QG 419
Query: 172 TVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDL 231
+V +++ A + P + E + F + ++GQFN +I+ + +DL
Sbjct: 420 SVTSKEALPYAPMAAPV-PVREPETAAPEPDPAAAGYFSSLGVIGQFNASYILCQRGTDL 478
Query: 232 FIIDQHATDEKYNFETLQKTTL---IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFE 288
+IDQHA E+ FE L+ + SQ L+ P+ + + +L+++L + GFE
Sbjct: 479 VLIDQHAAHERVAFEKLKGQFAGREVDSQGLLFPETMEFSFRESAVLREHLAELARLGFE 538
Query: 289 FSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRA-------M 341
F+ LL +P + T + I ++L L SR RA +
Sbjct: 539 --FEEFGGNTWLLKGVPQVLSATRYVDTIRDILEELGSL--------SRSRAFSDIQEDL 588
Query: 342 FASRACRKSVMIGRALSVGEMTGLVRNMGRID 373
A AC V R LS E+T L + M D
Sbjct: 589 LARIACHSVVRGKRTLSQVEITALFKQMDETD 620
>sp|A0Q0M7|MUTL_CLONN DNA mismatch repair protein MutL OS=Clostridium novyi (strain NT)
GN=mutL PE=3 SV=1
Length = 645
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 171/378 (45%), Gaps = 51/378 (13%)
Query: 14 HQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATV--KVHITDSYAIGFTVDGNN 71
+++PF +L +++ + +DVNV P K ++ E+++ V VH S +I + N
Sbjct: 279 NKFPFFVLFVDIYPEFIDVNVHPTKSEVKFQDERIIYKVVFDAVHSALSTSIK---ESFN 335
Query: 72 MNQ-SMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTP 130
+N+ S+ D + ++ + + E+V+ IP+ ++ + S NL + V + P
Sbjct: 336 INKDSIFDDKDTTYNLIQDETPKQEQVQ---IPIDLQNKRSDSIIENLPKFNPNVSYEKP 392
Query: 131 DETIEVIDDMPRLQGSYRQST--PVTLSLDIIQDQLKAR--YARRTVQAQDR---CVENR 183
+ S R++ + ++L ++LK + Y ++ A + E
Sbjct: 393 -------------KDSCRENCLNSIDINLKNTTEELKTKDIYYENSISASPKDNILCEKS 439
Query: 184 FHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKY 243
NID EA+ F ++ I+GQFN +I+ + ++IDQHA EK
Sbjct: 440 QSKNIDNYNTIEAK-----------FPRLNILGQFNKTYILAESLDTFYMIDQHAAHEKI 488
Query: 244 NFETLQ---KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVL 300
FE + + + SQ L+ P + ++ + +N+ +F+++G F + D +
Sbjct: 489 LFEKFKNQIENRDVISQILLTPVIIEMSAEDFAYYSENINIFHESG--FVTEVFGDNIIS 546
Query: 301 LTSLPMSKNTTLGREDIEELLF-MLQHTNSTEHCRPSRIR-AMFASRACRKSVMIGRALS 358
+ PM LG+ ++ + + + ++I+ M +S AC+ ++ LS
Sbjct: 547 IREAPM----LLGKVSTKDFFLEIFDDIKNMGNGNIAKIKHNMISSLACKAAIKANHTLS 602
Query: 359 VGEMTGLVRNMGRIDQPW 376
EM L+ ++ I++P+
Sbjct: 603 YEEMNSLIEDLRYIEEPF 620
>sp|A5GEV5|MUTL_GEOUR DNA mismatch repair protein MutL OS=Geobacter uraniireducens
(strain Rf4) GN=mutL PE=3 SV=1
Length = 602
Score = 65.1 bits (157), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 118/308 (38%), Gaps = 72/308 (23%)
Query: 4 VNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYA 62
V + Y F +YP ++L I + D VDVNV P K HE +VH A
Sbjct: 268 VLQAYRNFMERGRYPVVVLFITVPADEVDVNVHPTK------HEVRFREQGRVHDAIQAA 321
Query: 63 IGFTVDGNNM--NQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQ 120
+ + Q+ Q +S + + EV E + +S E +LQQ
Sbjct: 322 LESVLRATPWVRKQAAPQPFASPPPASEASATRVAEVR--------ETLARYSPEKHLQQ 373
Query: 121 SPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCV 180
S TV P + RQ V+L
Sbjct: 374 S-FTVPPAATFQ---------------RQQGAVSL------------------------- 392
Query: 181 ENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATD 240
P +E ++ ++ K + + ++GQFN +I+ + +DL IIDQHA
Sbjct: 393 ---------PVAAREDDTASDKTESKGYYCSLSVIGQFNAAYILCQDGTDLVIIDQHAAH 443
Query: 241 EKYNFETLQ---KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDG 297
E+ FE L+ ++SQ+L+ P+ + L+ L+++L + G FS +
Sbjct: 444 ERVAFEKLKAQFAAAQVESQRLLFPETIELSFKEGATLREHLAELGRLG--FSLEEFGGA 501
Query: 298 NVLLTSLP 305
LL ++P
Sbjct: 502 TWLLNAVP 509
>sp|C6E4L2|MUTL_GEOSM DNA mismatch repair protein MutL OS=Geobacter sp. (strain M21)
GN=mutL PE=3 SV=1
Length = 650
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 78/180 (43%), Gaps = 20/180 (11%)
Query: 204 IKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL---IKSQKLV 260
+ F + ++GQFN +I+ + +DL +IDQHA E+ FE L+ + SQ L+
Sbjct: 454 VAAGYFSSLGVIGQFNASYILCQRGTDLILIDQHAAHERVAFEKLKGQFAGREVDSQGLL 513
Query: 261 VPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEEL 320
P+ + + +L+++ + GFE F+ LL +P + T + I ++
Sbjct: 514 FPETMEFSFRESAVLREHQAELARLGFE--FEEFGGNTWLLKGVPQVLSATRYVDTIRDI 571
Query: 321 LFMLQHTNSTEHCRPSRIRA-------MFASRACRKSVMIGRALSVGEMTGLVRNMGRID 373
L L SR RA + A AC V R LS E+ L + M D
Sbjct: 572 LEELGSL--------SRSRAFSDIQEDLLARIACHSVVRGKRTLSPVEIAALFKQMDETD 623
>sp|Q49X89|MUTL_STAS1 DNA mismatch repair protein MutL OS=Staphylococcus saprophyticus
subsp. saprophyticus (strain ATCC 15305 / DSM 20229)
GN=mutL PE=3 SV=1
Length = 655
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/374 (21%), Positives = 157/374 (41%), Gaps = 34/374 (9%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNM-- 72
+YP +NIEM VDVNV P K ++ + E L + I +++ + N+M
Sbjct: 279 RYPICYINIEMDPILVDVNVHPTKLEVRLSKEDQLFNLIVEKIREAFKDRILIPQNDMDK 338
Query: 73 ----NQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPD 128
N+ ++Q +D EK Q+ E+ + PV S + + + S EP
Sbjct: 339 ITKKNKVLDQFEQQKLDFEKKQQQ-----ENHSQPVNSHEEDEKNDDKAYHSSQTHYEP- 392
Query: 129 TPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANI 188
D + + + + ST D Q Q Y + E F ++I
Sbjct: 393 --------TDYILKEENNTSVSTSPNSDDDYTQTQKSVLYDLENENQSEFINEADFDSDI 444
Query: 189 DPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETL 248
+ + + +++ + + M++VGQ + +II + ++ +++IDQHA E+ +E
Sbjct: 445 SNHSDSDIKGSVSKDPSRRV-PYMEVVGQVHGTYIIAQNENGMYMIDQHAAQERIKYEYF 503
Query: 249 QKT---TLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFS-FDSSDDGNVLLTSL 304
++ + Q L++P H + I+ + K G F +D ++ S
Sbjct: 504 REKIGEVTNEIQNLLIPLTFHFSTDELMIINQHKEELDKVGVHLEPFGGND---YIVDSY 560
Query: 305 PMSKNTTLGREDIEELL-FMLQHTNSTEHCRPSRIRAMFA-SRACRKSVMIGRALSVGEM 362
P+ T E I++++ ++L+H + +IR A +C+KS+ L EM
Sbjct: 561 PVWFPTAEAEEIIKDMIEYVLEH----KKVNVKKIREDAAIMMSCKKSIKANHYLKNNEM 616
Query: 363 TGLVRNMGRIDQPW 376
LV + + P+
Sbjct: 617 ADLVNQLRETEDPF 630
>sp|C5CF28|MUTL_KOSOT DNA mismatch repair protein MutL OS=Kosmotoga olearia (strain TBF
19.5.1) GN=mutL PE=3 SV=1
Length = 602
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/349 (21%), Positives = 148/349 (42%), Gaps = 64/349 (18%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMNQ 74
++PF IL I ++ + +DVN+ P K ++ + L+ +K + ++
Sbjct: 279 RFPFAILFISVNPEMIDVNIHPQKLEVRFSNPSLVFDAIKRAVRNT-------------- 324
Query: 75 SMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPDETI 134
++ S + + E P P ++N+S +QQ + E D P++
Sbjct: 325 --------------LRTSGTSILRIEKRPFPG-SSTNYS---GIQQDTKKQESDNPEKA- 365
Query: 135 EVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKNK 194
R G++ + T + + + +R V + +N NI+ + ++
Sbjct: 366 -------RGYGTHLRET---------HWEQRDHFEKRKVPLHYQP-DNELLLNIERTASR 408
Query: 195 EAE-SELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL 253
E +E + +F G F +I+ + L I+DQHA E+ +E L+K
Sbjct: 409 RFEKTEAKETGEPRLF------GVFGERYILAETKDGLLIVDQHAAHERLIYEKLKKAAK 462
Query: 254 IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLG 313
I+SQKL+ P L L + +L++ K GF+ SF+ + LT +P + ++
Sbjct: 463 IQSQKLLSPIRLTLEDSRKSLLREKKNDVEKLGFQISFEGD---RIFLTGIPSILSESVA 519
Query: 314 REDIEELLFMLQHTNSTEHCRPSRI-RAMFASRACRKSVMIGRALSVGE 361
+ E+L L+ E P +I + ++ AC+ ++ G LS E
Sbjct: 520 VNALNEVLDELRLEGLEE---PEKIFDHLLSTLACKSAIKTGDRLSESE 565
>sp|B1H0C7|MUTL_UNCTG DNA mismatch repair protein MutL OS=Uncultured termite group 1
bacterium phylotype Rs-D17 GN=mutL PE=3 SV=1
Length = 595
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 81/169 (47%), Gaps = 10/169 (5%)
Query: 212 MKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFE---TLQKTTLIKSQKLVVPQNLHLT 268
+K++GQ +II DL+I DQHA E+ +E + K+ IK Q++++P+N L+
Sbjct: 409 IKVIGQVFDTYIIASNKGDLYIFDQHAAAERVRYEFYLSQMKSQTIKIQQMLMPENFDLS 468
Query: 269 KINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELL-FMLQHT 327
+LK N+ +F N S + + +T+ P LG +E+++ ++
Sbjct: 469 PSISELLKANINIF--NELGISIEEFGQNSFRITAYP----ALLGNISMEQIVKTIISDI 522
Query: 328 NSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+H + R ACR S+ G +S E L+ ++ + QP+
Sbjct: 523 EDDKHAEIEQKRDKIIRSACRASIKAGDNVSFIEAKKLINDLFKCKQPF 571
>sp|B9DPC0|MUTL_STACT DNA mismatch repair protein MutL OS=Staphylococcus carnosus (strain
TM300) GN=mutL PE=3 SV=1
Length = 646
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 90/390 (23%), Positives = 167/390 (42%), Gaps = 48/390 (12%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K + E YH +YP +NIEM VDVNV P K ++ + E+ L + I ++
Sbjct: 265 KAIVEGYHTLLTIGRYPICYINIEMDPILVDVNVHPTKLEVRLSKEEQLYQLIVQKIQEA 324
Query: 61 YAIGFTVDGNNMNQSMEQDPSSDV------DMEKIQRSN--SEEVEHETIPVPSEDNSNF 112
+ + N+ N+ +++ DV D E SN +E+ + ET V +E++
Sbjct: 325 FKDKILIPHNDENKLYKKNKVLDVFEQQKLDFENRTASNPPAEKPDEETDRV-NENSDTQ 383
Query: 113 SHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRT 172
+ + N Q S + V+ D L+G+ + S + S
Sbjct: 384 AFQTNEQTSENGSDASYQAGQRAVLQD---LEGNTKNSEGLFDS---------------- 424
Query: 173 VQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLF 232
+ A I+ S++ E+E + ++ + M++VGQ + +II + ++ +F
Sbjct: 425 ----EATSNEAASAEIESSEDDVRETEHAKPHRRVPY--MEVVGQVHGTYIIAQNETGMF 478
Query: 233 IIDQHATDEKYNFETLQKT---TLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEF 289
+IDQHA E+ +E + + Q L++P H +K Q I+ K G
Sbjct: 479 MIDQHAAQERIKYEYFRDKIGEVTNEVQNLLIPMTFHFSKDEQMIINQYKDELDKVGVHL 538
Query: 290 S-FDSSDDGNVLLTSLPMSKNTTLGREDIEELL-FMLQHTNSTEHCRPSRIRAMFA-SRA 346
F S D ++ S P+ +E I++++ ++L+H +IR A +
Sbjct: 539 EPFGSHD---YIVNSYPVWFPKEEAQEIIQDMVEYVLEHRK----VDIKKIREEAAIMMS 591
Query: 347 CRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
C+KS+ L EM L+ + ++ P+
Sbjct: 592 CKKSIKANHYLRNHEMADLIDQLREMEDPF 621
>sp|Q3ACA6|MUTL_CARHZ DNA mismatch repair protein MutL OS=Carboxydothermus
hydrogenoformans (strain Z-2901 / DSM 6008) GN=mutL PE=3
SV=1
Length = 578
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 83/190 (43%), Gaps = 17/190 (8%)
Query: 187 NIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFE 246
N+ S NK+ ELN +++GQF+L +IIV+ + L IIDQHA E+ +E
Sbjct: 381 NLTFSLNKDFAKELN----------FQVIGQFSLKYIIVEKNDKLLIIDQHAAHERILYE 430
Query: 247 TLQ-KTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLP 305
Q K SQ L P + + + L++N F + G + G L+ +P
Sbjct: 431 KYQTKLNPFYSQVLTFPVRIKASPELEAFLQENYQNFLEIGLH--IEPFGPGEYLVREIP 488
Query: 306 MSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGL 365
+EE L+ + R ++ AC+ +V G L+ EMT L
Sbjct: 489 EDFPQNNIANVLEEYLYEIMEQKEQVSFREKALKLF----ACKNAVKFGEKLTYSEMTNL 544
Query: 366 VRNMGRIDQP 375
V+ + + + P
Sbjct: 545 VKELFKTNYP 554
>sp|A3CWX7|MUTL_METMJ DNA mismatch repair protein MutL OS=Methanoculleus marisnigri
(strain ATCC 35101 / DSM 1498 / JR1) GN=mutL PE=3 SV=1
Length = 585
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 80/177 (45%), Gaps = 13/177 (7%)
Query: 206 KSMFEKMKIVGQFNLGFIIVK-YDSDLFIIDQHATDEK--YNFETLQKTTLIKSQKLVVP 262
+++ M+ +GQ +I+ + D L+++DQHA E+ Y+ T Q+ SQ+L+ P
Sbjct: 392 ENLLPAMEPIGQVAATYIVAEGADGTLYLVDQHAAHERVLYDQVTEQRDKAAGSQELITP 451
Query: 263 QNLHLTKINQCILKDNLPVFYKNGF---EFSFDSSDDGNVLLTSLPMSKNTTLGREDIEE 319
L L L+D +P+ GF EF D+ + +L ++ RE I +
Sbjct: 452 VVLSLPPKESAALRDAIPLLADEGFVVDEFGRDTFAV-RAVPAALGAVEDPGTVRETIAD 510
Query: 320 LLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
L L + T R R+ + ACR +V G L+ + L+ + R PW
Sbjct: 511 L---LADESRTAPDRRERVTCIV---ACRGAVKAGALLTPDQQKRLIMQLARTKTPW 561
Score = 34.3 bits (77), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 26/48 (54%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYA 62
+YP L++ + VDVNV P KR+I + E+ + + + ++ A
Sbjct: 284 RYPVAFLDLAIDTGLVDVNVHPTKREIRLSREREITGAIAAAVDEALA 331
>sp|A4J5Q3|MUTL_DESRM DNA mismatch repair protein MutL OS=Desulfotomaculum reducens
(strain MI-1) GN=mutL PE=3 SV=1
Length = 640
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 148/369 (40%), Gaps = 38/369 (10%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMNQ 74
++P IL+I++ VDVNV P K +I M E + + ++DS + + G
Sbjct: 280 RFPIAILHIDIDPTQVDVNVHPTKMEIRMAREGEIQEELLAALSDSLNVPTAITG----- 334
Query: 75 SMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQ----QSPETVEPDTP 130
E P + QR+ + EV+ + S E LQ Q P V D P
Sbjct: 335 LWEIMPGRTKNTATDQRAENLEVKPD------------SKEKELQPKESQHPRLVACDLP 382
Query: 131 DETI-EVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANID 189
I D +L S R+ PV ++ D+ + R + E + N
Sbjct: 383 SGKIMPPRHDQEQLHFSSRRIAPVRGKNSLLPDE-GSSINREEIPPVVDVKEQQLKEN-- 439
Query: 190 PSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQ 249
P+ + AE+ F + GQ +++ + L+IIDQHA E+ +E
Sbjct: 440 PNTYQPAET--------LGFPVLVPAGQVPPTYVLAHGEGGLYIIDQHAAHERVLYEKYL 491
Query: 250 K--TTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMS 307
+++Q L+ P L + ++ ++ F + GF D LL +P +
Sbjct: 492 YLLGNYVEAQMLLEPLTLEIPHHEAQLIIKHIVDFNELGFILEHFGGD--TFLLRGVP-T 548
Query: 308 KNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVR 367
T +E +LL LQ S + + + + A+ ACR +V G+ S E L+
Sbjct: 549 NAITEPKEVFLDLLARLQENPSQKVEKNLVLDHLAAAMACRDAVKSGQHFSAVETKALLD 608
Query: 368 NMGRIDQPW 376
+ R +P+
Sbjct: 609 GLARCQKPY 617
>sp|Q03EQ8|MUTL_PEDPA DNA mismatch repair protein MutL OS=Pediococcus pentosaceus (strain
ATCC 25745 / 183-1w) GN=mutL PE=3 SV=1
Length = 645
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 119/281 (42%), Gaps = 44/281 (15%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYA----IGFTVDGN 70
+YP +LNI+ VDVNV P K+++ + E+ LL + + + A I VD
Sbjct: 279 RYPVAVLNIKTDPILVDVNVHPTKQEVRISEEQTLLDLISKAVFNELADKNLIPDAVD-- 336
Query: 71 NMNQSMEQDPSSD-VDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDT 129
N+ +S + SS+ +D+ ++ S S E+E + + +P DN E N+ S VEP+
Sbjct: 337 NLKKSRVKVSSSEQLDLARMAISGSFEMEQDHVTIPDTDNDEVEKEVNI--SDRYVEPE- 393
Query: 130 PDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANID 189
P + S RQ L D I + K +YA D V N
Sbjct: 394 -----------PIVINS-RQD----LKSDTIA-EFKTKYA------NDAVVNNTVEDGDQ 430
Query: 190 PSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQ 249
P EL F + +GQ + ++ + + L+IIDQHA E+ N+E +
Sbjct: 431 P--------ELKEKDAVQRFPTLTYIGQMHGTYLFAEAEDGLYIIDQHAAQERINYEYYR 482
Query: 250 KTTLIKS---QKLVVPQNLHLTKINQCILKDNLPVFYKNGF 287
S Q L+VP L + + +K+ V G
Sbjct: 483 VQIGEVSDDQQDLLVPIYLDYSTTDAIRIKEKQTVLESCGL 523
>sp|C1CBX8|MUTL_STRZJ DNA mismatch repair protein MutL OS=Streptococcus pneumoniae
(strain JJA) GN=mutL PE=3 SV=1
Length = 649
Score = 58.9 bits (141), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 155/368 (42%), Gaps = 41/368 (11%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMNQ 74
++P +++I + DVNV P K+++ + EK L+A V I +S Q
Sbjct: 280 RFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMALVSEAIANSLK----------EQ 329
Query: 75 SMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPDETI 134
++ P + ++ K N E+VE +P+ ++N+ + E EP P +T
Sbjct: 330 TL--IPDALENLAKSTVRNREKVEQTILPL--KENTLYY---------EKTEPSRPSQT- 375
Query: 135 EVIDDMPRLQGSYRQSTPVTL-SLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKN 193
EV D L + T +LD + K +A R D+ H +D +
Sbjct: 376 EVADYQVELTDEGQDLTLFAKETLDRLTKPAKLHFAERKPANYDQLD----HPELDLASI 431
Query: 194 KEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL 253
+A +L R + S F +++ GQ + ++ + L+IIDQHA E+ +E +++
Sbjct: 432 DKAYDKLERE-EASSFPELEFFGQMHGTYLFAQGRDGLYIIDQHAAQERVKYEEYRESIG 490
Query: 254 ---IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNT 310
Q+L+VP + LK+ +P+ + G + + +L P+
Sbjct: 491 NVDQSQQQLLVPYIFEFPADDALCLKERMPLLEEVGVFLA--EYGENQFILREHPI---- 544
Query: 311 TLGREDIEELLF-MLQHTNSTEHCRPSRIRAMFA-SRACRKSVMIGRALSVGEMTGLVRN 368
+ E+IE ++ M T+ + RA A +C++S+ + L+
Sbjct: 545 WMAEEEIESGIYEMCDMLLLTKEVSIKKYRAELAIMMSCKRSIKANHRIDDHSARQLLYQ 604
Query: 369 MGRIDQPW 376
+ + D P+
Sbjct: 605 LSQCDNPY 612
>sp|B8CX97|MUTL_HALOH DNA mismatch repair protein MutL OS=Halothermothrix orenii (strain
H 168 / OCM 544 / DSM 9562) GN=mutL PE=3 SV=1
Length = 644
Score = 58.9 bits (141), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 83/381 (21%), Positives = 168/381 (44%), Gaps = 61/381 (16%)
Query: 16 YPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMNQS 75
YP + LN++++ VDVNV P K+++ +K++ ++ +G N+ S
Sbjct: 281 YPVVFLNLKLNPILVDVNVHPTKKEVKFSRDKVIKEVIQ-------------NGINIELS 327
Query: 76 -MEQDPSSDVDMEKIQRSN--SEEVEHETIPVP--SEDNSNFSHEANLQQSPETVEPDTP 130
+++ P ++ + R + ++ E++ I +P E +N S +A + ++ + D+
Sbjct: 328 KLDKSPRLKRNINPLNRDDKTKDKSEYQKIKLPEDKEQITNKSSDAGILKNQNPL--DSQ 385
Query: 131 DETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHA---- 186
D + +P + + +S + D + D +++ +
Sbjct: 386 DSIL-----LPSKKNGFYSKKNSQVSQNKFMD---INNKLEKTEINDNYKKDKHYKTDSI 437
Query: 187 NIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFE 246
NI + KE +++++ IK +++GQ +II + L+IIDQH E+ ++
Sbjct: 438 NIKDNSIKENKNKMDIPIK-------RVLGQIKNTYIIAEGRDGLYIIDQHNAHERILYQ 490
Query: 247 TL---QKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFE---FSFDSSDDGNVL 300
+ + I SQ LVVP N+ T +LK LP K GF+ F +S +
Sbjct: 491 SFIEKYNNSEIVSQPLVVPVNIETTAPEAEVLKSYLPQLEKMGFKLEVFGINS-----FI 545
Query: 301 LTSLP----MSKNTTLGREDIEELLFMLQHTNSTEHCRPSR-IRAMFASRACRKSVMIGR 355
+ +P N + RE I++L L+H + +PS I + + +CR ++ G
Sbjct: 546 VREVPSLIKKRSNKRVVREVIDKL---LEHDKA---MKPSELINEIISYMSCRGAIKAGE 599
Query: 356 ALSVGEMTGLVRNMGRIDQPW 376
L E ++ + + D P+
Sbjct: 600 YLDKKEAEQIIEGLFKTDNPY 620
>sp|B4RLX4|MUTL_NEIG2 DNA mismatch repair protein MutL OS=Neisseria gonorrhoeae (strain
NCCP11945) GN=mutL PE=3 SV=1
Length = 658
Score = 58.2 bits (139), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 161/397 (40%), Gaps = 62/397 (15%)
Query: 1 MKLVNEVYHQ-FNNHQYPFIILNIEMSRDSVDVNVTPDKRQI-FMDH---EKLLLATVKV 55
+ V + Y +N P +L +E+ +VDVNV P K +I F D +L+ T+
Sbjct: 264 LHAVKQAYRDVLHNALTPAFVLFLELPPKAVDVNVHPTKTEIRFRDSRQVHQLVFHTLNK 323
Query: 56 HITDSYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETI-----PVPSEDNS 110
+ D+ A N+ +S+ SN+ EV H+ P+PSE++S
Sbjct: 324 ALADTRA--------NLTESV---------------SNAGEVLHDITGVTPAPMPSENDS 360
Query: 111 N--FSHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARY 168
F +N P +PDT + P + R +LSL + + Y
Sbjct: 361 ENLFDSASN---HPTGNKPDTRNAFGSSGKTAPMPYQAARAPQQHSLSLRESRAAMDT-Y 416
Query: 169 ARRTVQAQDRCVE------NRFHANIDPSKNKEAESELNRVI-KKSMFEKMKIVGQFNLG 221
A + D +E RF + + ++ L+ I +S + LG
Sbjct: 417 AELYKKTDDIDLELSQFEQARFGNMPSETPAHKTDTPLSDGIPSQSELPPLGFAIAQLLG 476
Query: 222 -FIIVKYDSDLFIIDQHATDEKYNFETL----QKTTLIKSQKLVVPQNLHLTKINQCILK 276
+I+ + + L +ID HA E+ N+E + Q+ ++SQ L++P + L
Sbjct: 477 IYILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGNLQSQHLLIPVTFAASHEECAALA 536
Query: 277 DNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDI----EELLFMLQHTNSTEH 332
D+ G E S GN L + LG+ D+ ++L L S++
Sbjct: 537 DHAETLAGFGLEL---SDMGGNTLAVR---AAPVMLGKSDVVSLARDVLGELAQVGSSQT 590
Query: 333 CRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
R + A+ +C S+ GR L++ EM L+R+M
Sbjct: 591 IASHENR-ILATMSCHGSIRAGRRLTLPEMNALLRDM 626
>sp|Q3A504|MUTL_PELCD DNA mismatch repair protein MutL OS=Pelobacter carbinolicus (strain
DSM 2380 / Gra Bd 1) GN=mutL PE=3 SV=1
Length = 628
Score = 58.2 bits (139), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 114/287 (39%), Gaps = 64/287 (22%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMNQ 74
++P ++L +E+ VDVNV P K ++ + L VH F V +
Sbjct: 282 RHPVLVLFLEIDPSQVDVNVHPTKHEVRFRQQAL------VH-------DFIVKA--LRD 326
Query: 75 SMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPDETI 134
++Q P+S +P+ NS F+ A E PDET
Sbjct: 327 HLQQVPTS--------------------AMPAPGNSPFTVPAR-----ENAASVKPDETK 361
Query: 135 EVIDDMPRL----QGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANIDP 190
+ D P +GS R P + + + + A D VE A+ P
Sbjct: 362 PALADTPAAFSAGEGSSRSDVPYPSASQVTETT-------DSYDAHDSGVEG---ASTAP 411
Query: 191 SKNKEAESELNRVIKKS-------MFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKY 243
++E + ++ S F ++++GQ+ +++ + + DL +IDQHA E+
Sbjct: 412 PLSEEGLFSVTADVRPSEQTENSGFFASLRLIGQYQNSYLVCQSEKDLILIDQHAAHERI 471
Query: 244 NFETLQKTTL---IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGF 287
FE L+K L I+ Q L+ P L I+++ ++ GF
Sbjct: 472 GFEHLRKQYLAGSIERQLLLFPLVLEFDFRLGRIVEEQRDSLFRLGF 518
>sp|Q9HSM6|MUTL_HALSA DNA mismatch repair protein MutL OS=Halobacterium salinarum (strain
ATCC 700922 / JCM 11081 / NRC-1) GN=mutL PE=3 SV=1
Length = 659
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/289 (20%), Positives = 114/289 (39%), Gaps = 41/289 (14%)
Query: 10 QFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDG 69
Q +YPF +L ++ + VD NV P K ++ + E + A V+ + D+ +D
Sbjct: 280 QLAPDRYPFAVLFVDC--EGVDANVHPRKLEVRFEDEAGVKAAVEAGVRDAL-----LDA 332
Query: 70 NNMNQSMEQDPSSDVDME-KIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPD 128
+ + S D E + S ++ + S+ + + + P
Sbjct: 333 GLVRAGAPRGASKPGDAEISPEHSPTDRDAGAAGGGDAAGQSDGNGQRTAASGATSESPA 392
Query: 129 TPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANI 188
+ ET G ++ S D +++ + RT RF A
Sbjct: 393 SAFET-----------GGGDEAADSAASTDGTRERPGSGTESRT---------GRFDA-- 430
Query: 189 DPSKNK---------EAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHAT 239
P++N EA+ + + ++ ++++GQ + +++ + L ++DQHA
Sbjct: 431 -PAENARLPTGAGGPEADDQ-DTTSERDSLPDLRVLGQLHDTYVVAEAGDGLVLVDQHAA 488
Query: 240 DEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFE 288
DE+ ++E LQ SQ LV P L LT + + L + GF+
Sbjct: 489 DERVHYERLQARVDGASQALVAPAELELTAGEAAVFEAALGGLRELGFD 537
>sp|B0R2S6|MUTL_HALS3 DNA mismatch repair protein MutL OS=Halobacterium salinarum (strain
ATCC 29341 / DSM 671 / R1) GN=mutL PE=3 SV=1
Length = 659
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/289 (20%), Positives = 114/289 (39%), Gaps = 41/289 (14%)
Query: 10 QFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDG 69
Q +YPF +L ++ + VD NV P K ++ + E + A V+ + D+ +D
Sbjct: 280 QLAPDRYPFAVLFVDC--EGVDANVHPRKLEVRFEDEAGVKAAVEAGVRDAL-----LDA 332
Query: 70 NNMNQSMEQDPSSDVDME-KIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPD 128
+ + S D E + S ++ + S+ + + + P
Sbjct: 333 GLVRAGAPRGASKPGDAEISPEHSPTDRDAGAAGGGDAAGQSDGNGQRTAASGATSESPA 392
Query: 129 TPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANI 188
+ ET G ++ S D +++ + RT RF A
Sbjct: 393 SAFET-----------GGGDEAADSAASTDGTRERPGSGTESRT---------GRFDA-- 430
Query: 189 DPSKNK---------EAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHAT 239
P++N EA+ + + ++ ++++GQ + +++ + L ++DQHA
Sbjct: 431 -PAENARLPTGAGGPEADDQ-DTTSERDSLPDLRVLGQLHDTYVVAEAGDGLVLVDQHAA 488
Query: 240 DEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFE 288
DE+ ++E LQ SQ LV P L LT + + L + GF+
Sbjct: 489 DERVHYERLQARVDGASQALVAPAELELTAGEAAVFEAALGGLRELGFD 537
>sp|Q8CPE9|MUTL_STAES DNA mismatch repair protein MutL OS=Staphylococcus epidermidis
(strain ATCC 12228) GN=mutL PE=3 SV=1
Length = 645
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 83/381 (21%), Positives = 158/381 (41%), Gaps = 31/381 (8%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K + E YH ++P +NI+M VDVNV P K ++ + E L + I ++
Sbjct: 265 KAILEGYHTLLTIGRFPICYINIQMDPILVDVNVHPTKLEVRLSKEDQLYDLIVTKIREA 324
Query: 61 YAIGFTVDGNNMNQSMEQDPSSDV-DMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQ 119
+ + N++N + +++ + + +KI + ET D + +H+
Sbjct: 325 FKDKILIPQNDLNHASKKNKVLETFEQQKINFEKQQSQIGETSAPYVHDQKDKNHDVESH 384
Query: 120 QSPETVEPDTPDETIEVIDDMP-RLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDR 178
++ T +E+ EV +++ + SY QS L D+ Q+ Y Q+ D
Sbjct: 385 KNNLDSTSSTNNESTEVSNELHNHIDDSYLQSQKEVL-FDMEQNT-SNEYEISNQQSND- 441
Query: 179 CVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHA 238
K +++ RV M+IVGQ + +II + ++ +F+IDQHA
Sbjct: 442 ------------IKGTVSQTPHRRV------PYMEIVGQVHGTYIIAQNENGMFMIDQHA 483
Query: 239 TDEKYNFETLQKT---TLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSD 295
E+ +E ++ + Q L++P H +K Q I+ K G
Sbjct: 484 AQERIKYEYFREKIGEVTNEVQNLLIPLTFHFSKDEQMIIDQYKDELDKVGVHLEHFGGH 543
Query: 296 DGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGR 355
D ++ S P+ E I++++ ++ S + + A+ S C+KS+
Sbjct: 544 D--YIVNSYPVWFPKEEAEEIIKDMIELVLKHKSVDVKKIREDAAIMMS--CKKSIKANH 599
Query: 356 ALSVGEMTGLVRNMGRIDQPW 376
L EM L+ + + P+
Sbjct: 600 YLKNNEMADLIDQLREAEDPF 620
>sp|Q5HPP4|MUTL_STAEQ DNA mismatch repair protein MutL OS=Staphylococcus epidermidis
(strain ATCC 35984 / RP62A) GN=mutL PE=3 SV=1
Length = 645
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 83/381 (21%), Positives = 158/381 (41%), Gaps = 31/381 (8%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K + E YH ++P +NI+M VDVNV P K ++ + E L + I ++
Sbjct: 265 KAILEGYHTLLTIGRFPICYINIQMDPILVDVNVHPTKLEVRLSKEDQLYDLIVTKIREA 324
Query: 61 YAIGFTVDGNNMNQSMEQDPSSDV-DMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQ 119
+ + N++N + +++ + + +KI + ET D + +H+
Sbjct: 325 FKDKILIPQNDLNHASKKNKVLETFEQQKINFEKQQSQIGETSAPYVHDQKDKNHDVESH 384
Query: 120 QSPETVEPDTPDETIEVIDDMP-RLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDR 178
++ T +E+ EV +++ + SY QS L D+ Q+ Y Q+ D
Sbjct: 385 KNNLDSTSSTNNESTEVSNELHNHIDDSYLQSQKEVL-FDMEQNT-SNEYEISNQQSND- 441
Query: 179 CVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHA 238
K +++ RV M+IVGQ + +II + ++ +F+IDQHA
Sbjct: 442 ------------IKGTVSQTPHRRV------PYMEIVGQVHGTYIIAQNENGMFMIDQHA 483
Query: 239 TDEKYNFETLQKT---TLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSD 295
E+ +E ++ + Q L++P H +K Q I+ K G
Sbjct: 484 AQERIKYEYFREKIGEVTNEVQNLLIPLTFHFSKDEQMIIDQYKDELDKVGVHLEHFGGH 543
Query: 296 DGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGR 355
D ++ S P+ E I++++ ++ S + + A+ S C+KS+
Sbjct: 544 D--YIVNSYPVWFPKEEAEEIIKDMIELVLKHKSVDVKKIREDAAIMMS--CKKSIKANH 599
Query: 356 ALSVGEMTGLVRNMGRIDQPW 376
L EM L+ + + P+
Sbjct: 600 YLKNNEMADLIDQLREAEDPF 620
>sp|Q5F8M6|MUTL_NEIG1 DNA mismatch repair protein MutL OS=Neisseria gonorrhoeae (strain
ATCC 700825 / FA 1090) GN=mutL PE=1 SV=1
Length = 658
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 94/396 (23%), Positives = 160/396 (40%), Gaps = 60/396 (15%)
Query: 1 MKLVNEVYHQ-FNNHQYPFIILNIEMSRDSVDVNVTPDKRQI-FMDH---EKLLLATVKV 55
+ V + Y +N P +L +E+ ++VDVNV P K +I F D +L+ T+
Sbjct: 264 LHAVKQAYRDVLHNALTPAFVLFLELPPEAVDVNVHPTKTEIRFRDSRQVHQLVFHTLNK 323
Query: 56 HITDSYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETI-----PVPSE-DN 109
+ D+ A N+ +S+ SN+ EV H+ P+PSE D
Sbjct: 324 ALADTRA--------NLTESV---------------SNAGEVLHDITGVTPAPMPSENDG 360
Query: 110 SNFSHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYA 169
N A+ P +PDT + P + R +LSL + + YA
Sbjct: 361 ENLFDSAS--NHPTGNKPDTRNAFGSSGKTAPMPYQAARAPQQHSLSLRESRAAMDT-YA 417
Query: 170 RRTVQAQDRCVE------NRFHANIDPSKNKEAESELNRVI-KKSMFEKMKIVGQFNLG- 221
+ D +E RF + + ++ L+ I +S + LG
Sbjct: 418 ELYKKTDDIDLELSQFEQARFGNMPSETPAHKTDTPLSDGIPSQSELPPLGFAIAQLLGI 477
Query: 222 FIIVKYDSDLFIIDQHATDEKYNFETL----QKTTLIKSQKLVVPQNLHLTKINQCILKD 277
+I+ + + L +ID HA E+ N+E + Q+ ++SQ L++P + L D
Sbjct: 478 YILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGNLQSQHLLIPVTFAASHEECAALAD 537
Query: 278 NLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDI----EELLFMLQHTNSTEHC 333
+ G E S GN L + LG+ D+ ++L L S++
Sbjct: 538 HAETLAGFGLEL---SDMGGNTLAVR---AAPVMLGKSDVVSLARDVLGELAQVGSSQTI 591
Query: 334 RPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
R + A+ +C S+ GR L++ EM L+R+M
Sbjct: 592 ASHENR-ILATMSCHGSIRAGRRLTLPEMNALLRDM 626
>sp|B5E6C5|MUTL_STRP4 DNA mismatch repair protein MutL OS=Streptococcus pneumoniae
serotype 19F (strain G54) GN=mutL PE=3 SV=1
Length = 649
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 155/368 (42%), Gaps = 41/368 (11%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMNQ 74
++P +++I + DVNV P K+++ + EK L+A V I +S Q
Sbjct: 280 RFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMALVSEAIANSLK----------EQ 329
Query: 75 SMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPDETI 134
++ P + ++ K N E+VE +P+ ++N+ + E EP P +T
Sbjct: 330 TL--IPDALENLAKSTVRNREKVEQTILPL--KENTFYY---------EKTEPSRPSQT- 375
Query: 135 EVIDDMPRLQGSYRQSTPVTL-SLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKN 193
EV D L + T +LD + K +A R D+ H +D +
Sbjct: 376 EVADYQVELTDEGQDLTLFAKETLDRLTKPAKLHFAERKPANYDQLD----HPELDLASI 431
Query: 194 KEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL 253
+A +L R + S F +++ GQ + ++ + L+IIDQHA E+ +E +++
Sbjct: 432 DKAYDKLERE-EASSFPELEFFGQMHGTYLFAQGRDGLYIIDQHAAQERVKYEEYRESIG 490
Query: 254 ---IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNT 310
Q+L+VP + LK+ +P+ + G + + +L P+
Sbjct: 491 NVDQSQQQLLVPYIFEFPADDALRLKERMPLLEEVGVFLA--EYGENQFILREHPI---- 544
Query: 311 TLGREDIEELLF-MLQHTNSTEHCRPSRIRAMFA-SRACRKSVMIGRALSVGEMTGLVRN 368
+ E+IE ++ M T+ + RA A +C++S+ + L+
Sbjct: 545 WMAEEEIESGIYEMCDMLLLTKEVSIKKYRAELAIMMSCKRSIKANHRIDDHSARQLLYQ 604
Query: 369 MGRIDQPW 376
+ + D P+
Sbjct: 605 LSQCDNPY 612
>sp|B3QW86|MUTL_CHLT3 DNA mismatch repair protein MutL OS=Chloroherpeton thalassium
(strain ATCC 35110 / GB-78) GN=mutL PE=3 SV=1
Length = 640
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 83/170 (48%), Gaps = 11/170 (6%)
Query: 213 KIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFE---TLQKTTLIKSQKLVVPQNLHLTK 269
+ V Q + +I+ + S L IIDQH E+ +E + ++ + SQ+L+ P + L+
Sbjct: 454 RFVWQLHNTYILTQIKSGLLIIDQHVAHERILYERAIAVMESNVPNSQQLLFPHSAKLSA 513
Query: 270 INQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGRED--IEELLFMLQHT 327
+LK+ + GF S D VL+ +P + GRE+ + E+L Q+
Sbjct: 514 WEFDVLKEIKTDLVQLGF--SLRILDQRTVLVEGIP--PDVMPGREERILHEML--EQYQ 567
Query: 328 NSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPWV 377
+ ++ + + + S ACR S+M G+ LS EMT L+ + P+V
Sbjct: 568 DYQQNLKLEQRDNVAKSYACRSSIMAGQKLSRNEMTSLIDQLFATSMPYV 617
>sp|B9M3N0|MUTL_GEOSF DNA mismatch repair protein MutL OS=Geobacter sp. (strain FRC-32)
GN=mutL PE=3 SV=1
Length = 598
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 204 IKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQ---KTTLIKSQKLV 260
+++ F + ++GQFN +I+ + + L IIDQHA E+ FE L+ ++SQ+L+
Sbjct: 403 VERGYFSGLSVIGQFNAAYILCQDGNSLVIIDQHAAHERVAFERLKTQHAAMGVESQRLL 462
Query: 261 VPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEEL 320
P+ + + +++++ + G FS + LL ++P + G + ++ L
Sbjct: 463 FPETVEFSFKEGAVIREHQTELDRVG--FSLEEFGGSTWLLNAVP---HLLSGNDYVKTL 517
Query: 321 LFMLQHTNSTEHCRPSR--IRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
+L+ S R + + + A AC V LS E+ L + M
Sbjct: 518 RDILEELQSLGRSRSFQDILEDILARIACHSVVRGSHCLSQQEIKALFQQM 568
>sp|O83325|MUTL_TREPA DNA mismatch repair protein MutL OS=Treponema pallidum (strain
Nichols) GN=mutL PE=3 SV=2
Length = 620
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 88/200 (44%), Gaps = 23/200 (11%)
Query: 190 PSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQ 249
P+ E ++ ++ F K++GQ FI V+ ++ L++IDQHA E+ F+TLQ
Sbjct: 424 PAPAAEGDAPVHNHTHTGAF---KVLGQVAGTFIAVERNNALYLIDQHAAHERIIFDTLQ 480
Query: 250 KTTLIKSQKLVVPQNLHLTKINQC-ILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSK 308
+ L +Q L++P ++H + I+ GF F DG+ +T++P+
Sbjct: 481 R-NLGTAQILLIPYHIHPRSDEEARIMHRACTELSPAGFR--FHEEPDGSWHVTAVPLHW 537
Query: 309 NTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRN 368
R E+L + ++ H +R + A+ ACR + G L + LV
Sbjct: 538 -----RGSEEQLAHDILYSGKNAH---DILRHVLATCACRSACKDGTILDDATLHSLVEQ 589
Query: 369 MGRIDQP--------WVSMG 380
+ Q W+ +G
Sbjct: 590 AFALPQSRCPHGRPIWIVIG 609
>sp|Q88UZ8|MUTL_LACPL DNA mismatch repair protein MutL OS=Lactobacillus plantarum (strain
ATCC BAA-793 / NCIMB 8826 / WCFS1) GN=mutL PE=3 SV=1
Length = 678
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 122/296 (41%), Gaps = 31/296 (10%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYA------IGFTVD 68
+YP ++ + M VDVNV P K+++ + E L V ITD T
Sbjct: 278 RYPIAVIALTMDPLLVDVNVHPTKQEVRLSKEPELAKLVSTTITDRLVDVNLIPSALTNL 337
Query: 69 GNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPD 128
G++ + + D + M+ S+ +V +T P +E + A +Q S T
Sbjct: 338 GSHRREHLNTD---QLAMDLNAVSSQYQVADKTTPASTEQFAASLAAATMQPSSATTMVS 394
Query: 129 TPDETIEVIDD------MPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVEN 182
T ++ +P + + P+ +S +D+L A VQA D+ ++
Sbjct: 395 TTSAQPSAVNRAAVSAVVPSESAASSANQPIMISH---RDELTAT----PVQAFDQRYQS 447
Query: 183 R-----FHANIDPSKNKEAESE-LNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQ 236
F +P + A S + F +++ +GQ + +++ + D ++I+DQ
Sbjct: 448 ESGALPFGETAEPLETSTAASAPTSEAPDTERFPQLRYLGQMHGTYLLAEADDGMYILDQ 507
Query: 237 HATDEKYNFETLQKT---TLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEF 289
HA E+ N+E ++ Q L+VP L + +K+ LP+ + G
Sbjct: 508 HAAQERINYEYYRQAIGEVSADQQNLLVPIILDYPTSDVLKIKEKLPLLAELGIHL 563
>sp|B2IS10|MUTL_STRPS DNA mismatch repair protein MutL OS=Streptococcus pneumoniae
(strain CGSP14) GN=mutL PE=3 SV=1
Length = 649
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 154/368 (41%), Gaps = 41/368 (11%)
Query: 15 QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMNQ 74
++P +++I + DVNV P K+++ + EK L+ V I +S Q
Sbjct: 280 RFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLK----------EQ 329
Query: 75 SMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPDETI 134
++ P + ++ K N E+VE +P+ ++N+ + E EP P +T
Sbjct: 330 TL--IPDALENLAKSTVRNREKVEQTILPL--KENTLYY---------EKTEPSRPSQT- 375
Query: 135 EVIDDMPRLQGSYRQSTPVTL-SLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKN 193
EV D L + T +LD + K +A R D+ H +D +
Sbjct: 376 EVADYQVELTDEGQDLTLFAKETLDRLTKPAKLHFAERKPANYDQLD----HPELDLASI 431
Query: 194 KEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL 253
+A +L R + S F +++ GQ + ++ + L+IIDQHA E+ +E +++
Sbjct: 432 DKAYDKLERE-EASSFPELEFFGQMHGTYLFAQGRDGLYIIDQHAAQERVKYEEYRESIG 490
Query: 254 ---IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNT 310
Q+L+VP + LK+ +P+ + G + + +L P+
Sbjct: 491 NVDQSQQQLLVPYIFEFPADDALRLKERMPLLEEVGVFLA--EYGENQFILREHPI---- 544
Query: 311 TLGREDIEELLF-MLQHTNSTEHCRPSRIRAMFA-SRACRKSVMIGRALSVGEMTGLVRN 368
+ E+IE ++ M T+ + RA A +C++S+ + L+
Sbjct: 545 WMAEEEIESGIYEMCDMLLLTKEVSIKKYRAELAIMMSCKRSIKANHRIDDHSARQLLYQ 604
Query: 369 MGRIDQPW 376
+ + D P+
Sbjct: 605 LSQCDNPY 612
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 134,933,528
Number of Sequences: 539616
Number of extensions: 5564343
Number of successful extensions: 17895
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 175
Number of HSP's successfully gapped in prelim test: 193
Number of HSP's that attempted gapping in prelim test: 17302
Number of HSP's gapped (non-prelim): 587
length of query: 380
length of database: 191,569,459
effective HSP length: 119
effective length of query: 261
effective length of database: 127,355,155
effective search space: 33239695455
effective search space used: 33239695455
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)