Your job contains 1 sequence.
>psy13670
MKLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS
YAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQ
SPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCV
ENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATD
EKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVL
LTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVG
EMTGLVRNMGRIDQPWVSMG
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy13670
(380 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-030131-686 - symbol:pms2 "PMS2 postmeiotic ... 623 2.8e-80 2
UNIPROTKB|F1NQJ2 - symbol:Gga.22468 "Uncharacterized prot... 608 3.4e-80 2
UNIPROTKB|F1RFM9 - symbol:PMS2 "Uncharacterized protein" ... 576 1.0e-75 2
UNIPROTKB|F1PNW0 - symbol:PMS2 "Uncharacterized protein" ... 569 2.5e-74 2
UNIPROTKB|F1PNU2 - symbol:PMS2 "Uncharacterized protein" ... 569 4.5e-74 2
FB|FBgn0011660 - symbol:Pms2 "Pms2" species:7227 "Drosoph... 584 1.1e-73 2
UNIPROTKB|D3ZZF0 - symbol:Pms2 "Protein Pms2" species:101... 561 6.8e-73 2
MGI|MGI:104288 - symbol:Pms2 "postmeiotic segregation inc... 551 7.5e-72 2
RGD|1305483 - symbol:Pms2 "PMS2 postmeiotic segregation i... 561 9.7e-72 2
UNIPROTKB|F1NQJ3 - symbol:Gga.22468 "Uncharacterized prot... 524 1.9e-70 2
SGD|S000005026 - symbol:PMS1 "ATP-binding protein involve... 465 9.3e-59 2
UNIPROTKB|C9J167 - symbol:PMS2 "Mismatch repair endonucle... 586 5.9e-57 1
UNIPROTKB|I3L0B5 - symbol:PMS2 "Mismatch repair endonucle... 586 5.9e-57 1
UNIPROTKB|P54278 - symbol:PMS2 "Mismatch repair endonucle... 586 1.2e-56 1
WB|WBGene00004064 - symbol:pms-2 species:6239 "Caenorhabd... 450 1.8e-55 2
UNIPROTKB|G5EFG5 - symbol:pms-2 "Protein PMS-2, isoform a... 450 1.8e-55 2
UNIPROTKB|Q69L72 - symbol:OSJNBa0016G10.12 "Os02g0592300 ... 376 2.1e-46 2
TAIR|locus:2133274 - symbol:PMS1 "POSTMEIOTIC SEGREGATION... 371 1.0e-42 2
ASPGD|ASPL0000093218 - symbol:AN11853 species:162425 "Eme... 332 3.8e-40 3
ASPGD|ASPL0000095187 - symbol:AN11854 species:162425 "Eme... 332 3.8e-40 3
UNIPROTKB|Q5AZG4 - symbol:AN6316.2 "ATP-binding protein (... 332 3.8e-40 3
UNIPROTKB|Q755U7 - symbol:AER421W "AER421Wp" species:2848... 410 2.7e-37 1
UNIPROTKB|Q7SAM1 - symbol:NCU08020 "Putative uncharacteri... 376 2.2e-36 2
DICTYBASE|DDB_G0283981 - symbol:pms1 "MutL DNA mismatch r... 376 1.6e-33 1
POMBASE|SPAC19G12.02c - symbol:pms1 "MutL family mismatch... 367 8.4e-33 1
UNIPROTKB|Q22B61 - symbol:TTHERM_01109940 "DNA mismatch r... 325 4.1e-28 1
UNIPROTKB|A8IT98 - symbol:CHLREDRAFT_101121 "Predicted pr... 259 2.6e-22 1
GENEDB_PFALCIPARUM|MAL7P1.145 - symbol:MAL7P1.145 "mismat... 132 4.2e-19 5
UNIPROTKB|Q8IBJ3 - symbol:MAL7P1.145 "Mismatch repair pro... 132 4.2e-19 5
UNIPROTKB|Q7RPM0 - symbol:PY01438 "DNA mismatch repair pr... 137 2.3e-18 3
UNIPROTKB|E1BA65 - symbol:PMS2 "Uncharacterized protein" ... 217 7.2e-15 1
UNIPROTKB|Q8TTB5 - symbol:mutL "DNA mismatch repair prote... 189 1.0e-11 1
TIGR_CMR|CHY_1396 - symbol:CHY_1396 "DNA mismatch repair ... 160 4.2e-11 2
UNIPROTKB|A9WJ86 - symbol:mutL "DNA mismatch repair prote... 143 1.4e-08 2
UNIPROTKB|Q74BP0 - symbol:mutL "DNA mismatch repair prote... 126 1.4e-08 2
TIGR_CMR|GSU_2001 - symbol:GSU_2001 "DNA mismatch repair ... 126 1.4e-08 2
DICTYBASE|DDB_G0283883 - symbol:mlh3 "MutL DNA mismatch r... 165 3.2e-08 2
TIGR_CMR|ECH_0884 - symbol:ECH_0884 "DNA mismatch repair ... 152 1.4e-07 1
TIGR_CMR|NSE_0609 - symbol:NSE_0609 "DNA mismatch repair ... 143 1.3e-06 1
UNIPROTKB|Q8F6X4 - symbol:mutL "DNA mismatch repair prote... 104 1.8e-06 2
TIGR_CMR|CBU_1083 - symbol:CBU_1083 "DNA mismatch repair ... 119 4.1e-06 2
UNIPROTKB|F1SN54 - symbol:PMS1 "Uncharacterized protein" ... 125 1.2e-05 2
TIGR_CMR|BA_3904 - symbol:BA_3904 "DNA mismatch repair pr... 89 3.4e-05 2
CGD|CAL0003904 - symbol:orf19.7257 species:5476 "Candida ... 103 3.6e-05 2
UNIPROTKB|Q48P04 - symbol:mutL "DNA mismatch repair prote... 114 4.0e-05 2
UNIPROTKB|E7EUC9 - symbol:MLH1 "DNA mismatch repair prote... 104 5.0e-05 1
UNIPROTKB|P49850 - symbol:mutL "DNA mismatch repair prote... 98 0.00050 2
>ZFIN|ZDB-GENE-030131-686 [details] [associations]
symbol:pms2 "PMS2 postmeiotic segregation increased
2 (S. cerevisiae)" species:7955 "Danio rerio" [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058
ZFIN:ZDB-GENE-030131-686 GO:GO:0005524 GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
GeneTree:ENSGT00530000063289 EMBL:CR932017 IPI:IPI00901265
Ensembl:ENSDART00000111565 Bgee:E7F558 Uniprot:E7F558
Length = 851
Score = 623 (224.4 bits), Expect = 2.8e-80, Sum P(2) = 2.8e-80
Identities = 146/310 (47%), Positives = 188/310 (60%)
Query: 82 SDVDMEKIQRSNSEEV-EHETIP-VPSEDNSN--FSHEANLQQSPETVEPDTPDETIEVI 137
+DV E + + E + +ET+P SE + N FS EA + + EP P + V
Sbjct: 528 TDVKAEIVDKPMDENLWSYETLPETKSEQHQNRIFSPEAKRARRED--EP--PAQNCLV- 582
Query: 138 DDMPRLQGSYRQSTPV-----TLSLDIIQDQLKARY----ARRTVQAQDRCVENRFHANI 188
D S + PV T+ L Q +L R A+RT + RF A I
Sbjct: 583 -DFKSRNASLKFDAPVNIKKKTVLLPFSQQELSKRMQRLQAQRTKSNEQEPKYRRFRAKI 641
Query: 189 DPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETL 248
+P +N+ AE EL + I K MF++M+I+GQFNLGFII K SDLFIIDQHATDEKYNFE L
Sbjct: 642 NPGENQTAEDELKKEISKDMFKEMEIIGQFNLGFIITKIKSDLFIIDQHATDEKYNFEML 701
Query: 249 QKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDD--GNVLLTSLPM 306
Q+ T++K Q+L+VPQ+LHL I++ +L +NL +F KNGF+F D V L SLP
Sbjct: 702 QQNTVLKGQRLIVPQSLHLPAISETVLMENLEIFRKNGFDFLIDEDAQVMDRVKLVSLPT 761
Query: 307 SKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLV 366
SKN T G DIEEL+FML + CRPSR+R MFASRACRKSVM+G AL+ EM LV
Sbjct: 762 SKNWTFGPNDIEELIFMLSDSPGIM-CRPSRVRQMFASRACRKSVMVGTALNTSEMKKLV 820
Query: 367 RNMGRIDQPW 376
+MG I+QPW
Sbjct: 821 LHMGEIEQPW 830
Score = 202 (76.2 bits), Expect = 2.8e-80, Sum P(2) = 2.8e-80
Identities = 38/63 (60%), Positives = 46/63 (73%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
KLVNEVYH +N HQYPF+ LNI ++ D VDVNVTPDKRQI + EKLLLA +K + +
Sbjct: 301 KLVNEVYHMYNRHQYPFVALNIAVASDCVDVNVTPDKRQILLQEEKLLLAILKSSLIAMF 360
Query: 62 AIG 64
G
Sbjct: 361 ETG 363
Score = 45 (20.9 bits), Expect = 3.8e-13, Sum P(2) = 3.8e-13
Identities = 28/120 (23%), Positives = 49/120 (40%)
Query: 224 IVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQ-KLVVPQNLHLTKINQCILKDNLPVF 282
I K D I+D+ + +++ETL +T + Q ++ P+ + ++ ++ L F
Sbjct: 525 INKTDVKAEIVDKPMDENLWSYETLPETKSEQHQNRIFSPEAKRARREDEPPAQNCLVDF 584
Query: 283 YKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPS--RIRA 340
FD+ + LP S+ R ++ L Q T S E P R RA
Sbjct: 585 KSRNASLKFDAPVNIKKKTVLLPFSQQELSKR--MQRL--QAQRTKSNEQ-EPKYRRFRA 639
>UNIPROTKB|F1NQJ2 [details] [associations]
symbol:Gga.22468 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=IEA] [GO:0006298 "mismatch
repair" evidence=IEA] [GO:0016446 "somatic hypermutation of
immunoglobulin genes" evidence=IEA] [GO:0016447 "somatic
recombination of immunoglobulin gene segments" evidence=IEA]
[GO:0032138 "single base insertion or deletion binding"
evidence=IEA] [GO:0032389 "MutLalpha complex" evidence=IEA]
[GO:0032407 "MutSalpha complex binding" evidence=IEA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032138 OMA:LDKPWNC
GeneTree:ENSGT00530000063289 EMBL:AADN02023908 EMBL:AADN02023909
IPI:IPI00819916 Ensembl:ENSGALT00000005429 ArrayExpress:F1NQJ2
Uniprot:F1NQJ2
Length = 878
Score = 608 (219.1 bits), Expect = 3.4e-80, Sum P(2) = 3.4e-80
Identities = 127/229 (55%), Positives = 157/229 (68%)
Query: 154 TLSLDIIQDQLKARYARRTVQAQDRCVEN----RFHANIDPSKNKEAESELNRVIKKSMF 209
T+ L+ L R R+ VQ Q +C E RF A I P +NK AE EL + I K MF
Sbjct: 631 TVPLEFSMKALAER-VRKIVQQQQKCTETQNYRRFRAKISPGENKVAEDELRKEISKEMF 689
Query: 210 EKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTK 269
KM+I+GQFNLGFII K +SDLFIIDQHATDEKYNFE LQ+ T+++ QKL+ PQNL+LT
Sbjct: 690 AKMEIIGQFNLGFIIAKLNSDLFIIDQHATDEKYNFEMLQQHTVLQGQKLIAPQNLNLTA 749
Query: 270 INQCILKDNLPVFYKNGFEFSFDSSDD--GNVLLTSLPMSKNTTLGREDIEELLFMLQHT 327
+N+ +L +NL +F KNGF+F + + V L SLP SKN T G +DI+EL+FML
Sbjct: 750 VNETVLIENLEIFRKNGFDFVINENAPVTQRVKLISLPTSKNWTFGPQDIDELIFMLSDC 809
Query: 328 NSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
CRPSR+R MFASRACRKSVMIG AL+V EM LV +MG I+ PW
Sbjct: 810 PGVM-CRPSRVRQMFASRACRKSVMIGTALNVQEMKKLVTHMGEIEHPW 857
Score = 220 (82.5 bits), Expect = 3.4e-80, Sum P(2) = 3.4e-80
Identities = 54/139 (38%), Positives = 81/139 (58%)
Query: 1 MKLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
+KLVNEVYH +N HQYPFI+LNI + + VD+NVTPDKRQI + EKLLLA +K + +
Sbjct: 318 VKLVNEVYHLYNKHQYPFIVLNICVDSECVDINVTPDKRQILLQEEKLLLAILKTSLIEM 377
Query: 61 YAIGFTVDGNNMNQSM------EQDPSSDVDMEKIQRSNSEEVEHET-----IPVPSEDN 109
+ G V+ N+NQ++ + P D + ++ S+ E E+ + + S
Sbjct: 378 F--GSDVNKLNVNQNLLDIVGNVKAPPGDAEKPWVEMSHHSETENPSSEGKRVMTLSRLR 435
Query: 110 SNFS-HEANLQ-QSPETVE 126
+FS H+ QSP+ V+
Sbjct: 436 ESFSLHQTESYFQSPKKVK 454
>UNIPROTKB|F1RFM9 [details] [associations]
symbol:PMS2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0032407 "MutSalpha complex binding" evidence=IEA]
[GO:0032389 "MutLalpha complex" evidence=IEA] [GO:0032138 "single
base insertion or deletion binding" evidence=IEA] [GO:0016447
"somatic recombination of immunoglobulin gene segments"
evidence=IEA] [GO:0016446 "somatic hypermutation of immunoglobulin
genes" evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0016446
GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032138 GO:GO:0016447 KO:K10858
OMA:LDKPWNC GeneTree:ENSGT00530000063289 CTD:5395 EMBL:FP102636
RefSeq:XP_003124331.1 Ensembl:ENSSSCT00000008330 GeneID:100514342
KEGG:ssc:100514342 Uniprot:F1RFM9
Length = 852
Score = 576 (207.8 bits), Expect = 1.0e-75, Sum P(2) = 1.0e-75
Identities = 122/280 (43%), Positives = 174/280 (62%)
Query: 105 PSEDNSNFSHEANLQQSPETVEPDTPDETIEVID----DMPRLQGSYRQSTPVTLSLDII 160
P N++ + ++ + PD P E + ++ ++ P+ S+ +
Sbjct: 556 PQPPNASSPNPKRFKKEGVPLNPDVPPEPVATQSVAAAEVDVAVDIEKKIVPLDFSMRSL 615
Query: 161 QDQLKARYARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNL 220
++K + R+ Q + +F A I P +N+ AE EL + I K MF +M+I+GQFNL
Sbjct: 616 AKRIK-QLCRQEQQREGEQNYRKFRAKICPGENQAAEDELRKEISKEMFAEMEIIGQFNL 674
Query: 221 GFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLP 280
GFII K ++D+FI+DQHATDEKYNFE LQ+ T+++ Q+L+VPQ L+LT +N+ +L +NL
Sbjct: 675 GFIITKLNADIFIVDQHATDEKYNFEMLQQHTVLQGQRLIVPQTLNLTAVNEAVLIENLD 734
Query: 281 VFYKNGFEFSFDSSDDGNVL----LTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPS 336
+F KNGF+F D +D V L SLP SKN T G +DI+EL+FML + CRPS
Sbjct: 735 IFRKNGFDFVID--EDAPVTERAKLISLPTSKNWTFGPQDIDELIFMLSDSPGVM-CRPS 791
Query: 337 RIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
R+R MFASRACRKSVMIG AL+ EM LV +MG +D PW
Sbjct: 792 RVRQMFASRACRKSVMIGTALNTSEMRRLVSHMGEMDHPW 831
Score = 212 (79.7 bits), Expect = 1.0e-75, Sum P(2) = 1.0e-75
Identities = 45/95 (47%), Positives = 63/95 (66%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
+LVNEVYH +N HQYPF++LNI + + VD+NVTPDKRQI + EKLLLA +K + D +
Sbjct: 304 RLVNEVYHLYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIDMF 363
Query: 62 AIGFTVDGNNMNQ-SMEQDPSSDVDMEKIQRSNSE 95
D N++N+ S+ Q DV+ I+R +E
Sbjct: 364 ------D-NDVNKISVRQQSLLDVEGNLIKRHPAE 391
>UNIPROTKB|F1PNW0 [details] [associations]
symbol:PMS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585 KO:K10858
GeneTree:ENSGT00530000063289 CTD:5395 EMBL:AAEX03004285
RefSeq:XP_536879.3 Ensembl:ENSCAFT00000024713 GeneID:479751
KEGG:cfa:479751 Uniprot:F1PNW0
Length = 866
Score = 569 (205.4 bits), Expect = 2.5e-74, Sum P(2) = 2.5e-74
Identities = 114/232 (49%), Positives = 155/232 (66%)
Query: 148 RQSTPVTLSLDIIQDQLKA-RYARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKK 206
++ P+ S+ + Q+K R + + + C +F A I P +N+ AE EL + I K
Sbjct: 617 KKVVPLAFSMRSLAKQIKQLRQQGQQREGEQNC--RKFRAKICPGENQAAEDELRKEISK 674
Query: 207 SMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLH 266
+MF +M+I+GQFNLGFII K +D+FI+DQHATDEKYNFE LQ+ T+++ Q+L+ PQ L+
Sbjct: 675 TMFAEMEIIGQFNLGFIITKLKADIFIVDQHATDEKYNFEMLQQHTVLQGQRLIAPQTLN 734
Query: 267 LTKINQCILKDNLPVFYKNGFEFSFDSSDD--GNVLLTSLPMSKNTTLGREDIEELLFML 324
LT +N+ IL +NL +F KNGF+F D L SLP SKN T G +DI+EL+FML
Sbjct: 735 LTAVNEAILIENLEIFRKNGFDFVIDEGAPVTERAKLISLPTSKNWTFGPQDIDELIFML 794
Query: 325 QHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+ CRPSR+R MFASRACRKSVMIG AL+ EM L+ +MG +D PW
Sbjct: 795 SDSPGVM-CRPSRVRQMFASRACRKSVMIGTALNTSEMKKLITHMGEMDHPW 845
Score = 208 (78.3 bits), Expect = 2.5e-74, Sum P(2) = 2.5e-74
Identities = 41/94 (43%), Positives = 58/94 (61%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
+LVNEVYH +N HQYPFI+LNI + + +D+NVTPDKRQI + EKLLLA +K + +
Sbjct: 304 RLVNEVYHMYNRHQYPFIVLNISVDSECIDINVTPDKRQILLQEEKLLLAVLKTSLIAMF 363
Query: 62 AIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSE 95
D N ++ Q P D++ I+ +E
Sbjct: 364 ------DSNVNKLTVSQQPLLDIEGHVIKTHQAE 391
Score = 37 (18.1 bits), Expect = 5.4e-13, Sum P(2) = 5.4e-13
Identities = 13/44 (29%), Positives = 19/44 (43%)
Query: 324 LQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVR 367
L H NS + CR S A + ++ G L+ GLV+
Sbjct: 557 LDHENSGQTCRISPQPADMSFSNTKRFKKDGAPLNSDAHPGLVK 600
>UNIPROTKB|F1PNU2 [details] [associations]
symbol:PMS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585 OMA:TINECED
GeneTree:ENSGT00530000063289 EMBL:AAEX03004285
Ensembl:ENSCAFT00000024721 Uniprot:F1PNU2
Length = 897
Score = 569 (205.4 bits), Expect = 4.5e-74, Sum P(2) = 4.5e-74
Identities = 114/232 (49%), Positives = 155/232 (66%)
Query: 148 RQSTPVTLSLDIIQDQLKA-RYARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKK 206
++ P+ S+ + Q+K R + + + C +F A I P +N+ AE EL + I K
Sbjct: 648 KKVVPLAFSMRSLAKQIKQLRQQGQQREGEQNC--RKFRAKICPGENQAAEDELRKEISK 705
Query: 207 SMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLH 266
+MF +M+I+GQFNLGFII K +D+FI+DQHATDEKYNFE LQ+ T+++ Q+L+ PQ L+
Sbjct: 706 TMFAEMEIIGQFNLGFIITKLKADIFIVDQHATDEKYNFEMLQQHTVLQGQRLIAPQTLN 765
Query: 267 LTKINQCILKDNLPVFYKNGFEFSFDSSDD--GNVLLTSLPMSKNTTLGREDIEELLFML 324
LT +N+ IL +NL +F KNGF+F D L SLP SKN T G +DI+EL+FML
Sbjct: 766 LTAVNEAILIENLEIFRKNGFDFVIDEGAPVTERAKLISLPTSKNWTFGPQDIDELIFML 825
Query: 325 QHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+ CRPSR+R MFASRACRKSVMIG AL+ EM L+ +MG +D PW
Sbjct: 826 SDSPGVM-CRPSRVRQMFASRACRKSVMIGTALNTSEMKKLITHMGEMDHPW 876
Score = 208 (78.3 bits), Expect = 4.5e-74, Sum P(2) = 4.5e-74
Identities = 41/94 (43%), Positives = 58/94 (61%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
+LVNEVYH +N HQYPFI+LNI + + +D+NVTPDKRQI + EKLLLA +K + +
Sbjct: 335 RLVNEVYHMYNRHQYPFIVLNISVDSECIDINVTPDKRQILLQEEKLLLAVLKTSLIAMF 394
Query: 62 AIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSE 95
D N ++ Q P D++ I+ +E
Sbjct: 395 ------DSNVNKLTVSQQPLLDIEGHVIKTHQAE 422
Score = 37 (18.1 bits), Expect = 6.0e-13, Sum P(2) = 6.0e-13
Identities = 13/44 (29%), Positives = 19/44 (43%)
Query: 324 LQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVR 367
L H NS + CR S A + ++ G L+ GLV+
Sbjct: 588 LDHENSGQTCRISPQPADMSFSNTKRFKKDGAPLNSDAHPGLVK 631
>FB|FBgn0011660 [details] [associations]
symbol:Pms2 "Pms2" species:7227 "Drosophila melanogaster"
[GO:0006298 "mismatch repair" evidence=ISS;IBA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0032389 "MutLalpha complex" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0016887 "ATPase
activity" evidence=IBA] [GO:0032407 "MutSalpha complex binding"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 EMBL:AE013599 GO:GO:0005524
GO:GO:0005875 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 eggNOG:COG0323 GO:GO:0032389 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9
KO:K10858 GeneTree:ENSGT00530000063289 CTD:5395 RefSeq:NP_477023.1
UniGene:Dm.4816 ProteinModelPortal:A1ZA03 SMR:A1ZA03 STRING:A1ZA03
PaxDb:A1ZA03 PRIDE:A1ZA03 EnsemblMetazoa:FBtr0087388 GeneID:36705
KEGG:dme:Dmel_CG8169 UCSC:CG8169-RA FlyBase:FBgn0011660
InParanoid:A1ZA03 OMA:GQGKRST OrthoDB:EOG4FJ6QW PhylomeDB:A1ZA03
GenomeRNAi:36705 NextBio:799969 Bgee:A1ZA03 Uniprot:A1ZA03
Length = 899
Score = 584 (210.6 bits), Expect = 1.1e-73, Sum P(2) = 1.1e-73
Identities = 131/271 (48%), Positives = 169/271 (62%)
Query: 110 SNFSHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKAR-Y 168
+ S E ++ S E + P IE ++M S S +T SL+ I LKA
Sbjct: 600 TQLSEETDIA-SDEDDHIELPTR-IEFDEEMEEGLPSNFSSGEITTSLEEIASSLKAHEQ 657
Query: 169 ARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYD 228
+R + + + RF I+P++N AE+EL R I K F +M+I+GQFNLGFIIVK +
Sbjct: 658 QQRDRRTRTKLQRLRFKTEINPNQNTSAEAELQREIDKEDFARMEIIGQFNLGFIIVKLE 717
Query: 229 SDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFE 288
DLFI+DQHATDEKYNFETLQ+TT ++ Q+L VPQNL LT +N+ +L +++ VF KNGF+
Sbjct: 718 DDLFIVDQHATDEKYNFETLQRTTQLEYQRLAVPQNLELTAVNEMVLLNHIDVFEKNGFK 777
Query: 289 FSFDSSDDGN--VLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRA 346
F D V L P SK G+EDI+EL+FMLQ CRPSR+RAMFASRA
Sbjct: 778 FEVDHEAPATKKVRLLGKPHSKRWEFGKEDIDELIFMLQDAPEGTICRPSRVRAMFASRA 837
Query: 347 CRKSVMIGRALSVGE-MTGLVRNMGRIDQPW 376
CRKSVMIG ALS M L+ MG I+QPW
Sbjct: 838 CRKSVMIGTALSRNTTMRRLITQMGEIEQPW 868
Score = 188 (71.2 bits), Expect = 1.1e-73, Sum P(2) = 1.1e-73
Identities = 40/115 (34%), Positives = 66/115 (57%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K++NEVYH++N Q PFI LNI +R VDVN+TPDKRQ+ +++E++LL +K + D++
Sbjct: 336 KVMNEVYHRYNVQQQPFIYLNIITARSDVDVNLTPDKRQLLINNERILLLALKKSLLDTF 395
Query: 62 A-IGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIP---VPSEDNSNF 112
T N +P ++ K + +S++ +HE + VP+ F
Sbjct: 396 GQTPATFQMQNTTIVSMLEPKTNSGKTKFPKESSKDDQHEEVSEEDVPTTSTQRF 450
Score = 51 (23.0 bits), Expect = 3.0e-59, Sum P(2) = 3.0e-59
Identities = 15/53 (28%), Positives = 27/53 (50%)
Query: 36 PDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMNQSMEQDPSSDVDMEK 88
P KR+ + E+L+ T+K+ ++ + + + E D +SDVDM K
Sbjct: 471 PVKRRC-SESEELVTRTLKMQKIHTFLSQESPNEQSSKCEAESDAASDVDMAK 522
>UNIPROTKB|D3ZZF0 [details] [associations]
symbol:Pms2 "Protein Pms2" species:10116 "Rattus
norvegicus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006298
"mismatch repair" evidence=IEA] [GO:0030983 "mismatched DNA
binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 RGD:1305483 GO:GO:0005524 GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
IPI:IPI00949446 ProteinModelPortal:D3ZZF0
Ensembl:ENSRNOT00000068106 ArrayExpress:D3ZZF0 Uniprot:D3ZZF0
Length = 850
Score = 561 (202.5 bits), Expect = 6.8e-73, Sum P(2) = 6.8e-73
Identities = 115/225 (51%), Positives = 153/225 (68%)
Query: 156 SLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIV 215
SL + Q+K + Q++ +F A I P +N+ AE EL R I+KSMF +M+I+
Sbjct: 609 SLSSLAKQMK-QLQHLKQQSKSEHNYRKFRAKICPGENQAAEDELRREIRKSMFAEMEIL 667
Query: 216 GQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCIL 275
GQFNLGFI+ K DLF++DQHA DEKYNFE LQ+ T++++Q+L+ PQ L+LT +N+ +L
Sbjct: 668 GQFNLGFIVTKLKEDLFLVDQHAADEKYNFEMLQQHTVLQAQRLITPQTLNLTAVNEAVL 727
Query: 276 KDNLPVFYKNGFEFSFDSSDDGNVL----LTSLPMSKNTTLGREDIEELLFMLQHTNSTE 331
+NL +F KNGF+F D +D V L SLP SKN T G +DI+EL+FML +
Sbjct: 728 IENLEIFRKNGFDFIID--EDAPVTERAKLISLPTSKNWTFGPQDIDELIFMLSDSPGVM 785
Query: 332 HCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
CRPSR+R MFASRACRKSVMIG ALS EM L+ +MG +D PW
Sbjct: 786 -CRPSRVRQMFASRACRKSVMIGTALSASEMKKLISHMGEMDHPW 829
Score = 202 (76.2 bits), Expect = 6.8e-73, Sum P(2) = 6.8e-73
Identities = 50/135 (37%), Positives = 75/135 (55%)
Query: 7 VYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFT 66
VYH +N HQYPF++LN+ + + VD+NVTPDKRQI + EKLLLA +K + F
Sbjct: 310 VYHMYNRHQYPFVVLNVSVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLMGM----FD 365
Query: 67 VDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIP---VPSEDNSNFS----HEA-NL 118
D N + S+ Q P +V+ ++ +E E E P + +E+ S EA +L
Sbjct: 366 SDANKL--SVNQQPLLNVEGNLVKLHTAEVGEQENSPSLRITAEEKRVASVSRLREAYSL 423
Query: 119 QQSPETVE--PDTPD 131
++ ET P+TP+
Sbjct: 424 HRTTETKSWGPETPE 438
>MGI|MGI:104288 [details] [associations]
symbol:Pms2 "postmeiotic segregation increased 2 (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=ISO] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0004518 "nuclease activity" evidence=IEA]
[GO:0004519 "endonuclease activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IMP] [GO:0006298 "mismatch
repair" evidence=ISO;IGI;IMP;TAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IGI;IMP] [GO:0007126 "meiosis"
evidence=TAS] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016446 "somatic hypermutation of immunoglobulin
genes" evidence=IMP] [GO:0016447 "somatic recombination of
immunoglobulin gene segments" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0030983 "mismatched DNA binding" evidence=IEA] [GO:0032138
"single base insertion or deletion binding" evidence=ISO]
[GO:0032389 "MutLalpha complex" evidence=IDA] [GO:0032407
"MutSalpha complex binding" evidence=IBA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 MGI:MGI:104288 Prosite:PS00058 GO:GO:0005524
GO:GO:0016887 GO:GO:0006298 GO:GO:0003697 GO:GO:0090305
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0004519 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407 GO:GO:0016446
eggNOG:COG0323 GermOnline:ENSMUSG00000029613 GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
GO:GO:0016447 HOGENOM:HOG000165474 HOVERGEN:HBG008219 EMBL:U28724
IPI:IPI00133511 UniGene:Mm.2950 ProteinModelPortal:P54279
SMR:P54279 STRING:P54279 PhosphoSite:P54279 PRIDE:P54279
ChiTaRS:Pms2 Genevestigator:P54279 Uniprot:P54279
Length = 859
Score = 551 (199.0 bits), Expect = 7.5e-72, Sum P(2) = 7.5e-72
Identities = 108/198 (54%), Positives = 142/198 (71%)
Query: 183 RFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEK 242
+F A I P +N+ AE EL + I KSMF +M+I+GQFNLGFI+ K DLF++DQHA DEK
Sbjct: 644 KFRAKICPGENQAAEDELRKEISKSMFAEMEILGQFNLGFIVTKLKEDLFLVDQHAADEK 703
Query: 243 YNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVL-- 300
YNFE LQ+ T++++Q+L+ PQ L+LT +N+ +L +NL +F KNGF+F D +D V
Sbjct: 704 YNFEMLQQHTVLQAQRLITPQTLNLTAVNEAVLIENLEIFRKNGFDFVID--EDAPVTER 761
Query: 301 --LTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALS 358
L SLP SKN T G +DI+EL+FML + CRPSR+R MFASRACRKSVMIG AL+
Sbjct: 762 AKLISLPTSKNWTFGPQDIDELIFMLSDSPGVM-CRPSRVRQMFASRACRKSVMIGTALN 820
Query: 359 VGEMTGLVRNMGRIDQPW 376
EM L+ +MG +D PW
Sbjct: 821 ASEMKKLITHMGEMDHPW 838
Score = 204 (76.9 bits), Expect = 7.5e-72, Sum P(2) = 7.5e-72
Identities = 47/112 (41%), Positives = 67/112 (59%)
Query: 1 MKLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
+ L YH +N HQYPF++LN+ + + VD+NVTPDKRQI + EKLLLA +K +
Sbjct: 303 LSLSMRFYHMYNRHQYPFVVLNVSVDSECVDINVTPDKRQILLQEEKLLLAVLKTSL--- 359
Query: 61 YAIG-FTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPS-EDNS 110
IG F D N +N + Q P DV+ + + ++ E+E PVP +DNS
Sbjct: 360 --IGMFDSDANKLN--VNQQPLLDVEGNLV-KLHTAELEK---PVPGKQDNS 403
>RGD|1305483 [details] [associations]
symbol:Pms2 "PMS2 postmeiotic segregation increased 2 (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0003697 "single-stranded DNA
binding" evidence=IBA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016446 "somatic hypermutation of immunoglobulin
genes" evidence=IBA] [GO:0016447 "somatic recombination of
immunoglobulin gene segments" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IBA] [GO:0032138 "single base insertion or
deletion binding" evidence=IEA] [GO:0032300 "mismatch repair
complex" evidence=IBA] [GO:0032389 "MutLalpha complex"
evidence=IBA] [GO:0032407 "MutSalpha complex binding" evidence=IBA]
[GO:0042493 "response to drug" evidence=IEP] InterPro:IPR002099
InterPro:IPR013507 InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676
SMART:SM00853 RGD:1305483 GO:GO:0005524 GO:GO:0042493 GO:GO:0016887
GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 EMBL:CH474012 GO:GO:0007131
GO:GO:0032407 GO:GO:0016446 GO:GO:0032389 PANTHER:PTHR10073
GO:GO:0032138 GO:GO:0016447 KO:K10858 GeneTree:ENSGT00530000063289
CTD:5395 IPI:IPI00949952 RefSeq:NP_001099378.1 UniGene:Rn.102072
Ensembl:ENSRNOT00000067021 GeneID:288479 KEGG:rno:288479
NextBio:628138 Uniprot:D4A360
Length = 542
Score = 561 (202.5 bits), Expect = 9.7e-72, Sum P(2) = 9.7e-72
Identities = 115/225 (51%), Positives = 153/225 (68%)
Query: 156 SLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIV 215
SL + Q+K + Q++ +F A I P +N+ AE EL R I+KSMF +M+I+
Sbjct: 301 SLSSLAKQMK-QLQHLKQQSKSEHNYRKFRAKICPGENQAAEDELRREIRKSMFAEMEIL 359
Query: 216 GQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCIL 275
GQFNLGFI+ K DLF++DQHA DEKYNFE LQ+ T++++Q+L+ PQ L+LT +N+ +L
Sbjct: 360 GQFNLGFIVTKLKEDLFLVDQHAADEKYNFEMLQQHTVLQAQRLITPQTLNLTAVNEAVL 419
Query: 276 KDNLPVFYKNGFEFSFDSSDDGNVL----LTSLPMSKNTTLGREDIEELLFMLQHTNSTE 331
+NL +F KNGF+F D +D V L SLP SKN T G +DI+EL+FML +
Sbjct: 420 IENLEIFRKNGFDFIID--EDAPVTERAKLISLPTSKNWTFGPQDIDELIFMLSDSPGVM 477
Query: 332 HCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
CRPSR+R MFASRACRKSVMIG ALS EM L+ +MG +D PW
Sbjct: 478 -CRPSRVRQMFASRACRKSVMIGTALSASEMKKLISHMGEMDHPW 521
Score = 183 (69.5 bits), Expect = 9.7e-72, Sum P(2) = 9.7e-72
Identities = 47/131 (35%), Positives = 72/131 (54%)
Query: 11 FNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGN 70
+N HQYPF++LN+ + + VD+NVTPDKRQI + EKLLLA +K + F D N
Sbjct: 2 YNRHQYPFVVLNVSVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLMGM----FDSDAN 57
Query: 71 NMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIP---VPSEDNSNFS----HEA-NLQQSP 122
+ S+ Q P +V+ ++ +E E E P + +E+ S EA +L ++
Sbjct: 58 KL--SVNQQPLLNVEGNLVKLHTAEVGEQENSPSLRITAEEKRVASVSRLREAYSLHRTT 115
Query: 123 ETVE--PDTPD 131
ET P+TP+
Sbjct: 116 ETKSWGPETPE 126
>UNIPROTKB|F1NQJ3 [details] [associations]
symbol:Gga.22468 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006298
"mismatch repair" evidence=IEA] [GO:0030983 "mismatched DNA
binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0006298 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 GeneTree:ENSGT00530000063289
EMBL:AADN02023908 EMBL:AADN02023909 IPI:IPI00604396
Ensembl:ENSGALT00000005427 ArrayExpress:F1NQJ3 Uniprot:F1NQJ3
Length = 858
Score = 524 (189.5 bits), Expect = 1.9e-70, Sum P(2) = 1.9e-70
Identities = 116/230 (50%), Positives = 147/230 (63%)
Query: 154 TLSLDIIQDQLKARYARRTVQAQDRCVEN----RFHANIDPSKNKEAESELNRVIKKSMF 209
T+ L+ L R R+ VQ Q +C E RF A I P +NK AE EL + I K MF
Sbjct: 615 TVPLEFSMKALAER-VRKIVQQQQKCTETQNYRRFRAKISPGENKVAEDELRKEISKEMF 673
Query: 210 EKMKIVGQFNLGFIIVKYD-SDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLT 268
KM+ + + F + DLFIIDQHATDEKYNFE LQ+ T+++ QKL+ PQNL+LT
Sbjct: 674 AKME---HWPVQFRVYNSQVEDLFIIDQHATDEKYNFEMLQQHTVLQGQKLIAPQNLNLT 730
Query: 269 KINQCILKDNLPVFYKNGFEFSFDSSDD--GNVLLTSLPMSKNTTLGREDIEELLFMLQH 326
+N+ +L +NL +F KNGF+F + + V L SLP SKN T G +DI+EL+FML
Sbjct: 731 AVNETVLIENLEIFRKNGFDFVINENAPVTQRVKLISLPTSKNWTFGPQDIDELIFMLSD 790
Query: 327 TNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
CRPSR+R MFASRACRKSVMIG AL+V EM LV +MG I+ PW
Sbjct: 791 CPGVM-CRPSRVRQMFASRACRKSVMIGTALNVQEMKKLVTHMGEIEHPW 839
Score = 220 (82.5 bits), Expect = 1.9e-70, Sum P(2) = 1.9e-70
Identities = 54/139 (38%), Positives = 81/139 (58%)
Query: 1 MKLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
+KLVNEVYH +N HQYPFI+LNI + + VD+NVTPDKRQI + EKLLLA +K + +
Sbjct: 295 VKLVNEVYHLYNKHQYPFIVLNICVDSECVDINVTPDKRQILLQEEKLLLAILKTSLIEM 354
Query: 61 YAIGFTVDGNNMNQSM------EQDPSSDVDMEKIQRSNSEEVEHET-----IPVPSEDN 109
+ G V+ N+NQ++ + P D + ++ S+ E E+ + + S
Sbjct: 355 F--GSDVNKLNVNQNLLDIVGNVKAPPGDAEKPWVEMSHHSETENPSSEGKRVMTLSRLR 412
Query: 110 SNFS-HEANLQ-QSPETVE 126
+FS H+ QSP+ V+
Sbjct: 413 ESFSLHQTESYFQSPKKVK 431
>SGD|S000005026 [details] [associations]
symbol:PMS1 "ATP-binding protein involved in mismatch repair"
species:4932 "Saccharomyces cerevisiae" [GO:0016887 "ATPase
activity" evidence=IMP;IDA] [GO:0032389 "MutLalpha complex"
evidence=IEA;IPI] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0000710 "meiotic mismatch repair" evidence=IMP] [GO:0006281
"DNA repair" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0032135 "DNA insertion or deletion
binding" evidence=IDA] [GO:0032139 "dinucleotide insertion or
deletion binding" evidence=IDA] [GO:0003697 "single-stranded DNA
binding" evidence=IDA] [GO:0003690 "double-stranded DNA binding"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA;IMP]
[GO:0006298 "mismatch repair" evidence=IEA;IMP] [GO:0000404 "loop
DNA binding" evidence=IDA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IBA] [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR015434
Pfam:PF01119 Pfam:PF02518 Pfam:PF08676 SMART:SM00387 SMART:SM00853
SGD:S000005026 Prosite:PS00058 GO:GO:0005524 GO:GO:0005737
EMBL:BK006947 GO:GO:0016887 Gene3D:3.30.565.10 SUPFAM:SSF55874
EMBL:DQ115393 GO:GO:0030983 EMBL:X86470 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
EMBL:X89016 eggNOG:COG0323 EMBL:AF458969 EMBL:AF458971
EMBL:AF458973 EMBL:AF458974 EMBL:AF458976 EMBL:AF458977 KO:K14561
RefSeq:NP_014324.3 GeneID:855649 KEGG:sce:YNL075W GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
GO:GO:0000710 PANTHER:PTHR10073:SF9 KO:K10858 OMA:LDKPWNC
OrthoDB:EOG4FFH9B EMBL:M29688 EMBL:DQ356628 EMBL:DQ356629
EMBL:DQ356630 EMBL:DQ356631 EMBL:DQ356632 EMBL:Z71357 EMBL:Z71358
PIR:S53896 RefSeq:NP_014317.4 PDB:3H4L PDBsum:3H4L
ProteinModelPortal:P14242 SMR:P14242 DIP:DIP-2416N IntAct:P14242
MINT:MINT-625253 STRING:P14242 PaxDb:P14242 PeptideAtlas:P14242
EnsemblFungi:YNL082W GeneID:855642 KEGG:sce:YNL082W CYGD:YNL082w
GeneTree:ENSGT00530000063289 EvolutionaryTrace:P14242
NextBio:979872 Genevestigator:P14242 GermOnline:YNL082W
Uniprot:P14242
Length = 873
Score = 465 (168.7 bits), Expect = 9.3e-59, Sum P(2) = 9.3e-59
Identities = 99/223 (44%), Positives = 148/223 (66%)
Query: 163 QLKARYARRTVQAQDRCVENRFHANIDPSKN-KEAESELNRVIKKSMFEKMKIVGQFNLG 221
Q+ + ++R +AQ+ ++N+ D ++ ++ E L + K+ F+KM++VGQFNLG
Sbjct: 629 QMSSIISKRKSEAQENIIKNK-----DELEDFEQGEKYLTLTVSKNDFKKMEVVGQFNLG 683
Query: 222 FIIV--KYDS--DLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKD 277
FIIV K D+ DLFI+DQHA+DEKYNFETLQ T+ KSQKL++PQ + L+ I++ ++ D
Sbjct: 684 FIIVTRKVDNKYDLFIVDQHASDEKYNFETLQAVTVFKSQKLIIPQPVELSVIDELVVLD 743
Query: 278 NLPVFYKNGFEFSFDSSDD-GN-VLLTSLPMSKNTTLGREDIEELLFMLQHTNST--EHC 333
NLPVF KNGF+ D ++ G+ V L SLP SK T D EL+ +++ ++
Sbjct: 744 NLPVFEKNGFKLKIDEEEEFGSRVKLLSLPTSKQTLFDLGDFNELIHLIKEDGGLRRDNI 803
Query: 334 RPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
R S+IR+MFA RACR S+MIG+ L+ MT +V N+ +D+PW
Sbjct: 804 RCSKIRSMFAMRACRSSIMIGKPLNKKTMTRVVHNLSELDKPW 846
Score = 172 (65.6 bits), Expect = 9.3e-59, Sum P(2) = 9.3e-59
Identities = 42/139 (30%), Positives = 66/139 (47%)
Query: 1 MKLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
+K NEVY FNN Q+P + LN+E+ +DVNVTPDKR I + +E+ ++ K ++D
Sbjct: 296 LKCCNEVYKTFNNVQFPAVFLNLELPMSLIDVNVTPDKRVILLHNERAVIDIFKTTLSDY 355
Query: 61 YAIGFTVDGNNMNQSMEQDPSSDVDMEKIQ-RSNSEEVEHETIPVPSEDNSNFSHEANLQ 119
Y M EQ + E RS + E ++E + SN S+ A+
Sbjct: 356 YNRQELALPKRMCSQSEQQAQKRLKTEVFDDRSTTHESDNENYHT-ARSESNQSNHAHFN 414
Query: 120 QSPETVEPDTPDETIEVID 138
+ ++ E V+D
Sbjct: 415 STTGVIDKSNGTELTSVMD 433
>UNIPROTKB|C9J167 [details] [associations]
symbol:PMS2 "Mismatch repair endonuclease PMS2"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006298 "mismatch repair" evidence=IEA] [GO:0030983 "mismatched
DNA binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676
SMART:SM00853 GO:GO:0005524 GO:GO:0006298 Gene3D:3.30.565.10
SUPFAM:SSF55874 EMBL:AC005995 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
PANTHER:PTHR10073 HOGENOM:HOG000165474 HGNC:HGNC:9122
IPI:IPI00604708 ProteinModelPortal:C9J167 SMR:C9J167 STRING:C9J167
Ensembl:ENST00000441476 UCSC:uc003spj.3 ArrayExpress:C9J167
Bgee:C9J167 Uniprot:C9J167
Length = 756
Score = 586 (211.3 bits), Expect = 5.9e-57, P = 5.9e-57
Identities = 131/346 (37%), Positives = 195/346 (56%)
Query: 43 MDHEKLLLATVKVHITDSYAIGFTVDGNNMNQ--SMEQDPSSDVDMEKIQ-RSNSEEV-- 97
+D E + H + YA D + S E+ P +D + SN E+
Sbjct: 395 VDSEGFSIPDTGSHCSSEYAASSPGDRGSQEHVDSQEKAPKTDDSFSDVDCHSNQEDTGC 454
Query: 98 EHETIPVPSE----DNSNFSHEANLQQSPETVE-PDTPDETIEVIDDMPRLQGSYRQSTP 152
+ +P P+ + F E L S + +T D + +D ++ ++ P
Sbjct: 455 KFRVLPQPTNLATPNTKRFKKEEILSSSDICQKLVNTQDMSASQVDVAVKIN---KKVVP 511
Query: 153 VTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKM 212
+ S+ + ++K + Q++ +F A I P +N+ AE EL + I K+MF +M
Sbjct: 512 LDFSMSSLAKRIKQLH-HEAQQSEGEQNYRKFRAKICPGENQAAEDELRKEISKTMFAEM 570
Query: 213 KIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQ 272
+I+GQFNLGFII K + D+FI+DQHATDEKYNFE LQ+ T+++ Q+L+ PQ L+LT +N+
Sbjct: 571 EIIGQFNLGFIITKLNEDIFIVDQHATDEKYNFEMLQQHTVLQGQRLIAPQTLNLTAVNE 630
Query: 273 CILKDNLPVFYKNGFEFSFDSSDD--GNVLLTSLPMSKNTTLGREDIEELLFMLQHTNST 330
+L +NL +F KNGF+F D + L SLP SKN T G +D++EL+FML +
Sbjct: 631 AVLIENLEIFRKNGFDFVIDENAPVTERAKLISLPTSKNWTFGPQDVDELIFMLSDSPGV 690
Query: 331 EHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
CRPSR++ MFASRACRKSVMIG AL+ EM L+ +MG +D PW
Sbjct: 691 M-CRPSRVKQMFASRACRKSVMIGTALNTSEMKKLITHMGEMDHPW 735
Score = 214 (80.4 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 50/110 (45%), Positives = 68/110 (61%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
+LVNEVYH +N HQYPF++LNI + + VD+NVTPDKRQI + EKLLLA +K +
Sbjct: 198 RLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSL---- 253
Query: 62 AIG-FTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNS 110
IG F D N +N S Q P DV+ I + ++ ++E V +D S
Sbjct: 254 -IGMFDSDVNKLNVS--QQPLLDVEGNLI-KMHAADLEKPM--VEKQDQS 297
>UNIPROTKB|I3L0B5 [details] [associations]
symbol:PMS2 "Mismatch repair endonuclease PMS2"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006298 "mismatch repair" evidence=IEA] [GO:0030983 "mismatched
DNA binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
Pfam:PF01119 Pfam:PF08676 SMART:SM00853 Prosite:PS00058
GO:GO:0005524 GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874
EMBL:AC005995 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 HGNC:HGNC:9122
ProteinModelPortal:I3L0B5 SMR:I3L0B5 Ensembl:ENST00000382322
Bgee:I3L0B5 Uniprot:I3L0B5
Length = 815
Score = 586 (211.3 bits), Expect = 5.9e-57, P = 5.9e-57
Identities = 131/346 (37%), Positives = 195/346 (56%)
Query: 43 MDHEKLLLATVKVHITDSYAIGFTVDGNNMNQ--SMEQDPSSDVDMEKIQ-RSNSEEV-- 97
+D E + H + YA D + S E+ P +D + SN E+
Sbjct: 454 VDSEGFSIPDTGSHCSSEYAASSPGDRGSQEHVDSQEKAPKTDDSFSDVDCHSNQEDTGC 513
Query: 98 EHETIPVPSE----DNSNFSHEANLQQSPETVE-PDTPDETIEVIDDMPRLQGSYRQSTP 152
+ +P P+ + F E L S + +T D + +D ++ ++ P
Sbjct: 514 KFRVLPQPTNLATPNTKRFKKEEILSSSDICQKLVNTQDMSASQVDVAVKIN---KKVVP 570
Query: 153 VTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKM 212
+ S+ + ++K + Q++ +F A I P +N+ AE EL + I K+MF +M
Sbjct: 571 LDFSMSSLAKRIKQLH-HEAQQSEGEQNYRKFRAKICPGENQAAEDELRKEISKTMFAEM 629
Query: 213 KIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQ 272
+I+GQFNLGFII K + D+FI+DQHATDEKYNFE LQ+ T+++ Q+L+ PQ L+LT +N+
Sbjct: 630 EIIGQFNLGFIITKLNEDIFIVDQHATDEKYNFEMLQQHTVLQGQRLIAPQTLNLTAVNE 689
Query: 273 CILKDNLPVFYKNGFEFSFDSSDD--GNVLLTSLPMSKNTTLGREDIEELLFMLQHTNST 330
+L +NL +F KNGF+F D + L SLP SKN T G +D++EL+FML +
Sbjct: 690 AVLIENLEIFRKNGFDFVIDENAPVTERAKLISLPTSKNWTFGPQDVDELIFMLSDSPGV 749
Query: 331 EHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
CRPSR++ MFASRACRKSVMIG AL+ EM L+ +MG +D PW
Sbjct: 750 M-CRPSRVKQMFASRACRKSVMIGTALNTSEMKKLITHMGEMDHPW 794
Score = 214 (80.4 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 50/110 (45%), Positives = 68/110 (61%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
+LVNEVYH +N HQYPF++LNI + + VD+NVTPDKRQI + EKLLLA +K +
Sbjct: 257 RLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSL---- 312
Query: 62 AIG-FTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNS 110
IG F D N +N S Q P DV+ I + ++ ++E V +D S
Sbjct: 313 -IGMFDSDVNKLNVS--QQPLLDVEGNLI-KMHAADLEKPM--VEKQDQS 356
>UNIPROTKB|P54278 [details] [associations]
symbol:PMS2 "Mismatch repair endonuclease PMS2"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004519 "endonuclease activity" evidence=IEA] [GO:0016447
"somatic recombination of immunoglobulin gene segments"
evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IBA]
[GO:0016446 "somatic hypermutation of immunoglobulin genes"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0032407 "MutSalpha complex binding" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IC] [GO:0006298 "mismatch repair" evidence=IDA]
[GO:0032138 "single base insertion or deletion binding"
evidence=IDA] [GO:0003697 "single-stranded DNA binding"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
GO:GO:0042493 GO:GO:0016887 GO:GO:0006298 GO:GO:0090305
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0004519 EMBL:AC005995
MIM:276300 Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 Orphanet:144 GO:GO:0016446
GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032138 GO:GO:0016447 KO:K10858
HOGENOM:HOG000165474 OMA:LDKPWNC HPA:CAB010235 EMBL:U13696
EMBL:AB103082 EMBL:AB103083 EMBL:AB103085 EMBL:U14658 EMBL:AK312390
EMBL:BC093921 IPI:IPI00418329 IPI:IPI00746337 IPI:IPI00873034
IPI:IPI00874088 PIR:S47598 RefSeq:NP_000526.1 UniGene:Hs.632637
PDB:1EA6 PDB:1H7S PDB:1H7U PDBsum:1EA6 PDBsum:1H7S PDBsum:1H7U
ProteinModelPortal:P54278 SMR:P54278 DIP:DIP-27602N IntAct:P54278
MINT:MINT-2804140 STRING:P54278 PhosphoSite:P54278 DMDM:1709685
SWISS-2DPAGE:P54278 PRIDE:P54278 Ensembl:ENST00000265849
Ensembl:ENST00000382321 Ensembl:ENST00000406569 GeneID:5395
KEGG:hsa:5395 UCSC:uc003spk.3 UCSC:uc010kte.3 UCSC:uc010ktf.2
CTD:5395 GeneCards:GC07M005979 HGNC:HGNC:9122 MIM:600259 MIM:614337
neXtProt:NX_P54278 PharmGKB:PA33448 HOVERGEN:HBG008219
InParanoid:P54278 PhylomeDB:P54278 EvolutionaryTrace:P54278
GenomeRNAi:5395 NextBio:20918 ArrayExpress:P54278 Bgee:P54278
CleanEx:HS_PMS2 Genevestigator:P54278 GermOnline:ENSG00000122512
Uniprot:P54278
Length = 862
Score = 586 (211.3 bits), Expect = 1.2e-56, P = 1.2e-56
Identities = 131/346 (37%), Positives = 195/346 (56%)
Query: 43 MDHEKLLLATVKVHITDSYAIGFTVDGNNMNQ--SMEQDPSSDVDMEKIQ-RSNSEEV-- 97
+D E + H + YA D + S E+ P +D + SN E+
Sbjct: 501 VDSEGFSIPDTGSHCSSEYAASSPGDRGSQEHVDSQEKAPKTDDSFSDVDCHSNQEDTGC 560
Query: 98 EHETIPVPSE----DNSNFSHEANLQQSPETVE-PDTPDETIEVIDDMPRLQGSYRQSTP 152
+ +P P+ + F E L S + +T D + +D ++ ++ P
Sbjct: 561 KFRVLPQPTNLATPNTKRFKKEEILSSSDICQKLVNTQDMSASQVDVAVKIN---KKVVP 617
Query: 153 VTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKM 212
+ S+ + ++K + Q++ +F A I P +N+ AE EL + I K+MF +M
Sbjct: 618 LDFSMSSLAKRIKQLH-HEAQQSEGEQNYRKFRAKICPGENQAAEDELRKEISKTMFAEM 676
Query: 213 KIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQ 272
+I+GQFNLGFII K + D+FI+DQHATDEKYNFE LQ+ T+++ Q+L+ PQ L+LT +N+
Sbjct: 677 EIIGQFNLGFIITKLNEDIFIVDQHATDEKYNFEMLQQHTVLQGQRLIAPQTLNLTAVNE 736
Query: 273 CILKDNLPVFYKNGFEFSFDSSDD--GNVLLTSLPMSKNTTLGREDIEELLFMLQHTNST 330
+L +NL +F KNGF+F D + L SLP SKN T G +D++EL+FML +
Sbjct: 737 AVLIENLEIFRKNGFDFVIDENAPVTERAKLISLPTSKNWTFGPQDVDELIFMLSDSPGV 796
Query: 331 EHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
CRPSR++ MFASRACRKSVMIG AL+ EM L+ +MG +D PW
Sbjct: 797 M-CRPSRVKQMFASRACRKSVMIGTALNTSEMKKLITHMGEMDHPW 841
Score = 214 (80.4 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 50/110 (45%), Positives = 68/110 (61%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
+LVNEVYH +N HQYPF++LNI + + VD+NVTPDKRQI + EKLLLA +K +
Sbjct: 304 RLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSL---- 359
Query: 62 AIG-FTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNS 110
IG F D N +N S Q P DV+ I + ++ ++E V +D S
Sbjct: 360 -IGMFDSDVNKLNVS--QQPLLDVEGNLI-KMHAADLEKPM--VEKQDQS 403
>WB|WBGene00004064 [details] [associations]
symbol:pms-2 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006298 "mismatch
repair" evidence=IEA] [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF02518 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
GO:GO:0009792 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 HSSP:P54278 KO:K10858
OMA:LDKPWNC GeneTree:ENSGT00530000063289 EMBL:Z74033 EMBL:AL022272
PIR:B89219 PIR:T21953 PIR:T21957 RefSeq:NP_505933.1
ProteinModelPortal:G5EFG5 SMR:G5EFG5 IntAct:G5EFG5 PRIDE:G5EFG5
EnsemblMetazoa:H12C20.2a GeneID:179587 KEGG:cel:CELE_H12C20.2
CTD:179587 WormBase:H12C20.2a NextBio:906048 Uniprot:G5EFG5
Length = 805
Score = 450 (163.5 bits), Expect = 1.8e-55, Sum P(2) = 1.8e-55
Identities = 92/203 (45%), Positives = 134/203 (66%)
Query: 177 DRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQ 236
++ V N I+ +N +AE +L+R + K F KMKI+GQFN GFII + LFI+DQ
Sbjct: 584 EKDVLNEITTKINKEENDDAERQLSRSLTKDDFSKMKIIGQFNHGFIICRLRGHLFIVDQ 643
Query: 237 HATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDD 296
HA+DEKYNFE LQ + + Q L +P L + + I+++NLP+F+ NGF+F F S +D
Sbjct: 644 HASDEKYNFERLQSSAKLTKQPLFMPTALGFGAVQELIIRENLPIFHANGFDFEF-SEND 702
Query: 297 GNV--LLTSLPMSKNTTLGREDIEELLFML-QHTNSTEHCRPSRIRAMFASRACRKSVMI 353
G + LT+ P N L D+EE+L ++ Q+ N + RP RIR +FAS+ACRKSVMI
Sbjct: 703 GCIKTFLTARPELLNQQLTNSDLEEILAVVSQYPN--QMYRPVRIRKIFASKACRKSVMI 760
Query: 354 GRALSVGEMTGLVRNMGRIDQPW 376
G+ L+ EMT ++R++ ++DQPW
Sbjct: 761 GKPLNQREMTQIIRHLAKLDQPW 783
Score = 154 (59.3 bits), Expect = 1.8e-55, Sum P(2) = 1.8e-55
Identities = 38/132 (28%), Positives = 70/132 (53%)
Query: 3 LVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYA 62
++N+VY QFN QYP I+L I++ + +DVNVTPDK+ + ++ E+ LLA V+ + +Y
Sbjct: 304 VINDVYKQFNKKQYPIIVLFIDVPPEKIDVNVTPDKKTVMLEKERHLLAVVRASMMKTYL 363
Query: 63 --IGF--TVDGNNMNQ---SMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHE 115
+G TV + ++ ++ Q S+ + S ++ + T+ ++S +
Sbjct: 364 KIVGSHSTVRSSVEDRRIMNLSQQSFSNASFMSSKSSTPDDFNNTTLNSTYPEDSLLNTS 423
Query: 116 ANLQQSPETVEP 127
L+Q E P
Sbjct: 424 DLLKQRKENRSP 435
>UNIPROTKB|G5EFG5 [details] [associations]
symbol:pms-2 "Protein PMS-2, isoform a" species:6239
"Caenorhabditis elegans" [GO:0006200 "ATP catabolic process"
evidence=IBA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0032407 "MutSalpha complex binding" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032300 "mismatch repair
complex" evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IBA]
[GO:0006298 "mismatch repair" evidence=IBA] [GO:0003697
"single-stranded DNA binding" evidence=IBA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR015434 Pfam:PF01119 Pfam:PF02518
Pfam:PF08676 SMART:SM00387 SMART:SM00853 Prosite:PS00058
GO:GO:0005524 GO:GO:0009792 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407 GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
PANTHER:PTHR10073:SF9 HSSP:P54278 KO:K10858 OMA:LDKPWNC
GeneTree:ENSGT00530000063289 EMBL:Z74033 EMBL:AL022272 PIR:B89219
PIR:T21953 PIR:T21957 RefSeq:NP_505933.1 ProteinModelPortal:G5EFG5
SMR:G5EFG5 IntAct:G5EFG5 PRIDE:G5EFG5 EnsemblMetazoa:H12C20.2a
GeneID:179587 KEGG:cel:CELE_H12C20.2 CTD:179587 WormBase:H12C20.2a
NextBio:906048 Uniprot:G5EFG5
Length = 805
Score = 450 (163.5 bits), Expect = 1.8e-55, Sum P(2) = 1.8e-55
Identities = 92/203 (45%), Positives = 134/203 (66%)
Query: 177 DRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQ 236
++ V N I+ +N +AE +L+R + K F KMKI+GQFN GFII + LFI+DQ
Sbjct: 584 EKDVLNEITTKINKEENDDAERQLSRSLTKDDFSKMKIIGQFNHGFIICRLRGHLFIVDQ 643
Query: 237 HATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDD 296
HA+DEKYNFE LQ + + Q L +P L + + I+++NLP+F+ NGF+F F S +D
Sbjct: 644 HASDEKYNFERLQSSAKLTKQPLFMPTALGFGAVQELIIRENLPIFHANGFDFEF-SEND 702
Query: 297 GNV--LLTSLPMSKNTTLGREDIEELLFML-QHTNSTEHCRPSRIRAMFASRACRKSVMI 353
G + LT+ P N L D+EE+L ++ Q+ N + RP RIR +FAS+ACRKSVMI
Sbjct: 703 GCIKTFLTARPELLNQQLTNSDLEEILAVVSQYPN--QMYRPVRIRKIFASKACRKSVMI 760
Query: 354 GRALSVGEMTGLVRNMGRIDQPW 376
G+ L+ EMT ++R++ ++DQPW
Sbjct: 761 GKPLNQREMTQIIRHLAKLDQPW 783
Score = 154 (59.3 bits), Expect = 1.8e-55, Sum P(2) = 1.8e-55
Identities = 38/132 (28%), Positives = 70/132 (53%)
Query: 3 LVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYA 62
++N+VY QFN QYP I+L I++ + +DVNVTPDK+ + ++ E+ LLA V+ + +Y
Sbjct: 304 VINDVYKQFNKKQYPIIVLFIDVPPEKIDVNVTPDKKTVMLEKERHLLAVVRASMMKTYL 363
Query: 63 --IGF--TVDGNNMNQ---SMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHE 115
+G TV + ++ ++ Q S+ + S ++ + T+ ++S +
Sbjct: 364 KIVGSHSTVRSSVEDRRIMNLSQQSFSNASFMSSKSSTPDDFNNTTLNSTYPEDSLLNTS 423
Query: 116 ANLQQSPETVEP 127
L+Q E P
Sbjct: 424 DLLKQRKENRSP 435
>UNIPROTKB|Q69L72 [details] [associations]
symbol:OSJNBa0016G10.12 "Os02g0592300 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032407 "MutSalpha complex
binding" evidence=IBA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0009555
GO:GO:0016887 GO:GO:0048316 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 EMBL:AP008208 EMBL:CM000139
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
eggNOG:COG0323 GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 KO:K10858 OMA:LDKPWNC
EMBL:AP005874 RefSeq:NP_001047292.1 UniGene:Os.23276 STRING:Q69L72
EnsemblPlants:LOC_Os02g37920.1 GeneID:4329835 KEGG:osa:4329835
ProtClustDB:CLSN2689293 Uniprot:Q69L72
Length = 923
Score = 376 (137.4 bits), Expect = 2.1e-46, Sum P(2) = 2.1e-46
Identities = 83/195 (42%), Positives = 116/195 (59%)
Query: 196 AESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIK 255
A SEL+++ K F +M++VGQFNLGFII K D DLFI+DQHA DEKYNFE L ++T +
Sbjct: 701 ATSELDKLFSKDDFGEMEVVGQFNLGFIIGKLDQDLFIVDQHAADEKYNFENLSQSTTLN 760
Query: 256 SQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFD--SSDDGNVLLTSLPMSKNTTLG 313
Q L+ P L L+ + I+ N+ KNGF + D +S + ++P SKN T G
Sbjct: 761 IQPLLQPLRLDLSPEEEVIVSMNMSTIRKNGFVLAEDLHASPCNRYFIKAVPFSKNITFG 820
Query: 314 REDIEELLFMLQHTNS------------TEHCRPSRIRAMFASRACRKSVMIGRALSVGE 361
+D++EL+ ML + T+ PSR+RAM ASRACR S MIG L+ E
Sbjct: 821 AQDVKELISMLADSQGDCSIISSYKLDRTDSICPSRVRAMLASRACRMSTMIGDPLTKTE 880
Query: 362 MTGLVRNMGRIDQPW 376
M +++N+ + PW
Sbjct: 881 MKKILKNLTGLRSPW 895
Score = 148 (57.2 bits), Expect = 2.1e-46, Sum P(2) = 2.1e-46
Identities = 50/176 (28%), Positives = 80/176 (45%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
KLVNE+Y N QYP +LN + S DVNV PDKR+IF E +L +++ I + Y
Sbjct: 281 KLVNELYRSSNAKQYPVAVLNFCIPTTSYDVNVAPDKRKIFFSSEHAILLSLREGIENLY 340
Query: 62 A---IGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEE--VEHETIPVPSEDNSNFSHEA 116
F+++ S+E DP ++D I S+ + E E + P D+ ++
Sbjct: 341 CPQQCSFSIN------SVE-DPGKEMD-PAIDGSDEDMCLTEKENVSAPENDDDMDETDS 392
Query: 117 NLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKA-RYARR 171
+ + +PE + + T P+ + P L + L A RY +R
Sbjct: 393 DDEVTPENQKVPSSVTTRVATGSTPKDVSPLSRGPPAQLDRSTL---LSAYRYEQR 445
>TAIR|locus:2133274 [details] [associations]
symbol:PMS1 "POSTMEIOTIC SEGREGATION 1" species:3702
"Arabidopsis thaliana" [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IC] [GO:0006200 "ATP catabolic
process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=ISS;IMP] [GO:0007131 "reciprocal meiotic recombination"
evidence=RCA;IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0030983 "mismatched DNA binding" evidence=IEA;IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0006310 "DNA recombination"
evidence=IMP] [GO:0009555 "pollen development" evidence=RCA;IMP]
[GO:0010154 "fruit development" evidence=IMP] [GO:0048316 "seed
development" evidence=IMP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=RCA] [GO:0006261 "DNA-dependent
DNA replication" evidence=RCA] [GO:0006275 "regulation of DNA
replication" evidence=RCA] [GO:0006306 "DNA methylation"
evidence=RCA] [GO:0006312 "mitotic recombination" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007129 "synapsis" evidence=RCA] [GO:0007140 "male meiosis"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009560 "embryo sac egg cell differentiation" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009691
"cytokinin biosynthetic process" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0009845
"seed germination" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010050 "vegetative phase change"
evidence=RCA] [GO:0010072 "primary shoot apical meristem
specification" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=RCA] [GO:0010431
"seed maturation" evidence=RCA] [GO:0010564 "regulation of cell
cycle process" evidence=RCA] [GO:0016444 "somatic cell DNA
recombination" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016568 "chromatin modification" evidence=RCA]
[GO:0019915 "lipid storage" evidence=RCA] [GO:0031047 "gene
silencing by RNA" evidence=RCA] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0048366 "leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] [GO:0051301 "cell division" evidence=RCA] [GO:0051726
"regulation of cell cycle" evidence=RCA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
EMBL:CP002687 GO:GO:0009555 GO:GO:0016887 GO:GO:0048316
GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032389 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9
HSSP:P54278 KO:K10858 HOGENOM:HOG000165474 OMA:LDKPWNC
ProtClustDB:CLSN2689293 EMBL:AY047228 IPI:IPI00544288
RefSeq:NP_567236.1 UniGene:At.26416 ProteinModelPortal:Q941I6
SMR:Q941I6 STRING:Q941I6 PRIDE:Q941I6 EnsemblPlants:AT4G02460.1
GeneID:827997 KEGG:ath:AT4G02460 TAIR:At4g02460 InParanoid:Q941I6
PhylomeDB:Q941I6 Genevestigator:Q941I6 Uniprot:Q941I6
Length = 923
Score = 371 (135.7 bits), Expect = 1.0e-42, Sum P(2) = 1.0e-42
Identities = 82/195 (42%), Positives = 120/195 (61%)
Query: 196 AESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIK 255
A SEL R+ +K F +M+++GQFNLGFII K + DLFI+DQHA DEK+NFE L ++T++
Sbjct: 689 ATSELERLFRKEDFRRMQVLGQFNLGFIIAKLERDLFIVDQHAADEKFNFEHLARSTVLN 748
Query: 256 SQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFD-SSDDG-NVLLTSLPMSKNTTLG 313
Q L+ P NL L+ + + ++ + +NGF + S+ G + L ++P SKN T G
Sbjct: 749 QQPLLQPLNLELSPEEEVTVLMHMDIIRENGFLLEENPSAPPGKHFRLRAIPYSKNITFG 808
Query: 314 REDIEELLFML--QH----------TNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGE 361
ED+++L+ L H T+ T+ PSR+RAM ASRACR SVMIG L E
Sbjct: 809 VEDLKDLISTLGDNHGECSVASSYKTSKTDSICPSRVRAMLASRACRSSVMIGDPLRKNE 868
Query: 362 MTGLVRNMGRIDQPW 376
M +V ++ ++ PW
Sbjct: 869 MQKIVEHLADLESPW 883
Score = 118 (46.6 bits), Expect = 1.0e-42, Sum P(2) = 1.0e-42
Identities = 27/93 (29%), Positives = 52/93 (55%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
KLVNE+Y ++ +YP IL+ + + D+NVTPDKR++F E ++ +++ + + Y
Sbjct: 289 KLVNELYKDTSSRKYPVTILDFIVPGGACDLNVTPDKRKVFFSDETSVIGSLREGLNEIY 348
Query: 62 AIG-FTVDGNNMNQSMEQDPSSDVDMEKIQRSN 93
+ + N ++ EQ + V + ++SN
Sbjct: 349 SSSNASYIVNRFEENSEQPDKAGVSSFQ-KKSN 380
>ASPGD|ASPL0000093218 [details] [associations]
symbol:AN11853 species:162425 "Emericella nidulans"
[GO:0032389 "MutLalpha complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0032139 "dinucleotide insertion or
deletion binding" evidence=IEA] [GO:0003697 "single-stranded DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000404 "loop DNA binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0000710 "meiotic mismatch repair"
evidence=IEA] [GO:0043570 "maintenance of DNA repeat elements"
evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 EMBL:AACD01000107 EMBL:BN001301 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 InterPro:IPR009395 Pfam:PF06320 eggNOG:COG0323
GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 KO:K10858
HOGENOM:HOG000165474 OrthoDB:EOG4FFH9B RefSeq:XP_663920.1
ProteinModelPortal:Q5AZG4 STRING:Q5AZG4
EnsemblFungi:CADANIAT00006671 GeneID:2870963 KEGG:ani:AN6316.2
OMA:SDFAKMK Uniprot:Q5AZG4
Length = 1228
Score = 332 (121.9 bits), Expect = 3.8e-40, Sum P(3) = 3.8e-40
Identities = 73/161 (45%), Positives = 102/161 (63%)
Query: 227 YDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNG 286
+ +LFIIDQHA+DEK NFE LQ TT +++Q+LV P+ L LT + + I+ +N + KNG
Sbjct: 789 FKDELFIIDQHASDEKINFERLQSTTTVQNQRLVHPKRLDLTAVEEEIVIENQVILEKNG 848
Query: 287 FEFSFDSSDDGNV----LLTSLPMSKNTTLGREDIEELLFMLQHT---NST----EHCRP 335
F D S D + L SLP+SK D+EEL+ +L T N+T + RP
Sbjct: 849 FVVDVDDSGDKPIGQRCSLLSLPLSKEVVFDVRDLEELIAILTETSTPNTTGPEIDIPRP 908
Query: 336 SRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
S++R MFA RACR S+MIG+ L+ +M +VR+MG ID+PW
Sbjct: 909 SKVRKMFAMRACRSSIMIGKTLTQRQMERVVRDMGTIDKPW 949
Score = 121 (47.7 bits), Expect = 3.8e-40, Sum P(3) = 3.8e-40
Identities = 45/170 (26%), Positives = 77/170 (45%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K +NEVY FN Q PF+ + M ++ DVNV+PDKR I + L+ ++K + +
Sbjct: 286 KAINEVYKSFNLAQSPFVFADFHMDTNAYDVNVSPDKRTILLHDAGALIESLKQSLQKLF 345
Query: 62 -AIGFTVDGNNM--------NQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNF 112
+ TV + + +S+ + SD ME+ + S+ +E E + P P +
Sbjct: 346 ESADQTVPQSQILGKLPLARQRSLPETTRSDRAMEQ-EASDRDEREGGSQPNPQDRMKGL 404
Query: 113 SHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQD 162
+ +P PDET+ PR S + +P + S +Q+
Sbjct: 405 LGNIRTRDTP-------PDETL------PRRTLSQQHFSPASSSPAPVQE 441
Score = 95 (38.5 bits), Expect = 3.1e-37, Sum P(3) = 3.1e-37
Identities = 42/142 (29%), Positives = 67/142 (47%)
Query: 98 EH-ETIPVPSEDNSNFSHEANLQQSPET---VEPDTPDETIEVIDDMPRL-QG-SYRQST 151
EH +T P P++++ N + E ++ E +E I +L +G SYR ST
Sbjct: 635 EHTQTEPQPAKEDMN-AEEKKRREDAEVQRLIEEAGKANQANSISRANKLHKGVSYRDST 693
Query: 152 -----PVTLSLDIIQDQLKA---RYARRTVQA-QDRCVENRFHANIDPSKNKEAESELNR 202
+ SL I+ Q K ++RR + + +D E+R + + P E L
Sbjct: 694 VHLATAINASLSRIESQAKYIHDSHSRRNLSSSEDELDESRL-SQVAP------EERLTL 746
Query: 203 VIKKSMFEKMKIVGQFNLGFII 224
+ K F +M+I GQFNLGFI+
Sbjct: 747 TVNKDDFARMRIHGQFNLGFIL 768
Score = 57 (25.1 bits), Expect = 2.7e-33, Sum P(3) = 2.7e-33
Identities = 28/125 (22%), Positives = 48/125 (38%)
Query: 65 FTVDGNNMN--QSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSP 122
F G+ M+ S EQ+ D D E+++ S+ HE + + + E +++
Sbjct: 561 FAAPGSQMSTHDSDEQESFEDEDEEEVEESDGV---HEDLEAEAGKETESEVEDQVEEEV 617
Query: 123 ETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVEN 182
E E P DD + Q+ P D+ ++ K R + Q R +E
Sbjct: 618 EEAESFVPS------DDNATQSDEHTQTEPQPAKEDMNAEEKKRR---EDAEVQ-RLIEE 667
Query: 183 RFHAN 187
AN
Sbjct: 668 AGKAN 672
Score = 51 (23.0 bits), Expect = 1.1e-32, Sum P(3) = 1.1e-32
Identities = 20/94 (21%), Positives = 44/94 (46%)
Query: 113 SHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRT 172
+H+++ Q+S E + + +E+ V +D+ G +S D ++++++ A
Sbjct: 570 THDSDEQESFEDEDEEEVEESDGVHEDLEAEAGKETESEVE----DQVEEEVEE--AESF 623
Query: 173 VQAQDRCVENRFHANIDPSKNKEAESELNRVIKK 206
V + D ++ H +P KE ++N KK
Sbjct: 624 VPSDDNATQSDEHTQTEPQPAKE---DMNAEEKK 654
Score = 40 (19.1 bits), Expect = 3.8e-40, Sum P(3) = 3.8e-40
Identities = 8/31 (25%), Positives = 16/31 (51%)
Query: 185 HANIDPSKNKEAESELNRVIKKSMFEKMKIV 215
H +++ KE ESE+ +++ + E V
Sbjct: 594 HEDLEAEAGKETESEVEDQVEEEVEEAESFV 624
Score = 38 (18.4 bits), Expect = 3.1e-37, Sum P(3) = 3.1e-37
Identities = 7/27 (25%), Positives = 14/27 (51%)
Query: 35 TPDKRQIFMDHEKLLLATVKVHITDSY 61
TPD++ +F++ L + I + Y
Sbjct: 266 TPDRQMLFVNSRPCALPQITKAINEVY 292
>ASPGD|ASPL0000095187 [details] [associations]
symbol:AN11854 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 EMBL:AACD01000107 EMBL:BN001301 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 InterPro:IPR009395 Pfam:PF06320 eggNOG:COG0323
GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 KO:K10858
HOGENOM:HOG000165474 OrthoDB:EOG4FFH9B RefSeq:XP_663920.1
ProteinModelPortal:Q5AZG4 STRING:Q5AZG4
EnsemblFungi:CADANIAT00006671 GeneID:2870963 KEGG:ani:AN6316.2
OMA:SDFAKMK Uniprot:Q5AZG4
Length = 1228
Score = 332 (121.9 bits), Expect = 3.8e-40, Sum P(3) = 3.8e-40
Identities = 73/161 (45%), Positives = 102/161 (63%)
Query: 227 YDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNG 286
+ +LFIIDQHA+DEK NFE LQ TT +++Q+LV P+ L LT + + I+ +N + KNG
Sbjct: 789 FKDELFIIDQHASDEKINFERLQSTTTVQNQRLVHPKRLDLTAVEEEIVIENQVILEKNG 848
Query: 287 FEFSFDSSDDGNV----LLTSLPMSKNTTLGREDIEELLFMLQHT---NST----EHCRP 335
F D S D + L SLP+SK D+EEL+ +L T N+T + RP
Sbjct: 849 FVVDVDDSGDKPIGQRCSLLSLPLSKEVVFDVRDLEELIAILTETSTPNTTGPEIDIPRP 908
Query: 336 SRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
S++R MFA RACR S+MIG+ L+ +M +VR+MG ID+PW
Sbjct: 909 SKVRKMFAMRACRSSIMIGKTLTQRQMERVVRDMGTIDKPW 949
Score = 121 (47.7 bits), Expect = 3.8e-40, Sum P(3) = 3.8e-40
Identities = 45/170 (26%), Positives = 77/170 (45%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K +NEVY FN Q PF+ + M ++ DVNV+PDKR I + L+ ++K + +
Sbjct: 286 KAINEVYKSFNLAQSPFVFADFHMDTNAYDVNVSPDKRTILLHDAGALIESLKQSLQKLF 345
Query: 62 -AIGFTVDGNNM--------NQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNF 112
+ TV + + +S+ + SD ME+ + S+ +E E + P P +
Sbjct: 346 ESADQTVPQSQILGKLPLARQRSLPETTRSDRAMEQ-EASDRDEREGGSQPNPQDRMKGL 404
Query: 113 SHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQD 162
+ +P PDET+ PR S + +P + S +Q+
Sbjct: 405 LGNIRTRDTP-------PDETL------PRRTLSQQHFSPASSSPAPVQE 441
Score = 95 (38.5 bits), Expect = 3.1e-37, Sum P(3) = 3.1e-37
Identities = 42/142 (29%), Positives = 67/142 (47%)
Query: 98 EH-ETIPVPSEDNSNFSHEANLQQSPET---VEPDTPDETIEVIDDMPRL-QG-SYRQST 151
EH +T P P++++ N + E ++ E +E I +L +G SYR ST
Sbjct: 635 EHTQTEPQPAKEDMN-AEEKKRREDAEVQRLIEEAGKANQANSISRANKLHKGVSYRDST 693
Query: 152 -----PVTLSLDIIQDQLKA---RYARRTVQA-QDRCVENRFHANIDPSKNKEAESELNR 202
+ SL I+ Q K ++RR + + +D E+R + + P E L
Sbjct: 694 VHLATAINASLSRIESQAKYIHDSHSRRNLSSSEDELDESRL-SQVAP------EERLTL 746
Query: 203 VIKKSMFEKMKIVGQFNLGFII 224
+ K F +M+I GQFNLGFI+
Sbjct: 747 TVNKDDFARMRIHGQFNLGFIL 768
Score = 57 (25.1 bits), Expect = 2.7e-33, Sum P(3) = 2.7e-33
Identities = 28/125 (22%), Positives = 48/125 (38%)
Query: 65 FTVDGNNMN--QSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSP 122
F G+ M+ S EQ+ D D E+++ S+ HE + + + E +++
Sbjct: 561 FAAPGSQMSTHDSDEQESFEDEDEEEVEESDGV---HEDLEAEAGKETESEVEDQVEEEV 617
Query: 123 ETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVEN 182
E E P DD + Q+ P D+ ++ K R + Q R +E
Sbjct: 618 EEAESFVPS------DDNATQSDEHTQTEPQPAKEDMNAEEKKRR---EDAEVQ-RLIEE 667
Query: 183 RFHAN 187
AN
Sbjct: 668 AGKAN 672
Score = 51 (23.0 bits), Expect = 1.1e-32, Sum P(3) = 1.1e-32
Identities = 20/94 (21%), Positives = 44/94 (46%)
Query: 113 SHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRT 172
+H+++ Q+S E + + +E+ V +D+ G +S D ++++++ A
Sbjct: 570 THDSDEQESFEDEDEEEVEESDGVHEDLEAEAGKETESEVE----DQVEEEVEE--AESF 623
Query: 173 VQAQDRCVENRFHANIDPSKNKEAESELNRVIKK 206
V + D ++ H +P KE ++N KK
Sbjct: 624 VPSDDNATQSDEHTQTEPQPAKE---DMNAEEKK 654
Score = 40 (19.1 bits), Expect = 3.8e-40, Sum P(3) = 3.8e-40
Identities = 8/31 (25%), Positives = 16/31 (51%)
Query: 185 HANIDPSKNKEAESELNRVIKKSMFEKMKIV 215
H +++ KE ESE+ +++ + E V
Sbjct: 594 HEDLEAEAGKETESEVEDQVEEEVEEAESFV 624
Score = 38 (18.4 bits), Expect = 3.1e-37, Sum P(3) = 3.1e-37
Identities = 7/27 (25%), Positives = 14/27 (51%)
Query: 35 TPDKRQIFMDHEKLLLATVKVHITDSY 61
TPD++ +F++ L + I + Y
Sbjct: 266 TPDRQMLFVNSRPCALPQITKAINEVY 292
>UNIPROTKB|Q5AZG4 [details] [associations]
symbol:AN6316.2 "ATP-binding protein (Eurofung)"
species:227321 "Aspergillus nidulans FGSC A4" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032407 "MutSalpha complex
binding" evidence=IBA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 EMBL:AACD01000107 EMBL:BN001301 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 InterPro:IPR009395 Pfam:PF06320 eggNOG:COG0323
GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 KO:K10858
HOGENOM:HOG000165474 OrthoDB:EOG4FFH9B RefSeq:XP_663920.1
ProteinModelPortal:Q5AZG4 STRING:Q5AZG4
EnsemblFungi:CADANIAT00006671 GeneID:2870963 KEGG:ani:AN6316.2
OMA:SDFAKMK Uniprot:Q5AZG4
Length = 1228
Score = 332 (121.9 bits), Expect = 3.8e-40, Sum P(3) = 3.8e-40
Identities = 73/161 (45%), Positives = 102/161 (63%)
Query: 227 YDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNG 286
+ +LFIIDQHA+DEK NFE LQ TT +++Q+LV P+ L LT + + I+ +N + KNG
Sbjct: 789 FKDELFIIDQHASDEKINFERLQSTTTVQNQRLVHPKRLDLTAVEEEIVIENQVILEKNG 848
Query: 287 FEFSFDSSDDGNV----LLTSLPMSKNTTLGREDIEELLFMLQHT---NST----EHCRP 335
F D S D + L SLP+SK D+EEL+ +L T N+T + RP
Sbjct: 849 FVVDVDDSGDKPIGQRCSLLSLPLSKEVVFDVRDLEELIAILTETSTPNTTGPEIDIPRP 908
Query: 336 SRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
S++R MFA RACR S+MIG+ L+ +M +VR+MG ID+PW
Sbjct: 909 SKVRKMFAMRACRSSIMIGKTLTQRQMERVVRDMGTIDKPW 949
Score = 121 (47.7 bits), Expect = 3.8e-40, Sum P(3) = 3.8e-40
Identities = 45/170 (26%), Positives = 77/170 (45%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
K +NEVY FN Q PF+ + M ++ DVNV+PDKR I + L+ ++K + +
Sbjct: 286 KAINEVYKSFNLAQSPFVFADFHMDTNAYDVNVSPDKRTILLHDAGALIESLKQSLQKLF 345
Query: 62 -AIGFTVDGNNM--------NQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNF 112
+ TV + + +S+ + SD ME+ + S+ +E E + P P +
Sbjct: 346 ESADQTVPQSQILGKLPLARQRSLPETTRSDRAMEQ-EASDRDEREGGSQPNPQDRMKGL 404
Query: 113 SHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQD 162
+ +P PDET+ PR S + +P + S +Q+
Sbjct: 405 LGNIRTRDTP-------PDETL------PRRTLSQQHFSPASSSPAPVQE 441
Score = 95 (38.5 bits), Expect = 3.1e-37, Sum P(3) = 3.1e-37
Identities = 42/142 (29%), Positives = 67/142 (47%)
Query: 98 EH-ETIPVPSEDNSNFSHEANLQQSPET---VEPDTPDETIEVIDDMPRL-QG-SYRQST 151
EH +T P P++++ N + E ++ E +E I +L +G SYR ST
Sbjct: 635 EHTQTEPQPAKEDMN-AEEKKRREDAEVQRLIEEAGKANQANSISRANKLHKGVSYRDST 693
Query: 152 -----PVTLSLDIIQDQLKA---RYARRTVQA-QDRCVENRFHANIDPSKNKEAESELNR 202
+ SL I+ Q K ++RR + + +D E+R + + P E L
Sbjct: 694 VHLATAINASLSRIESQAKYIHDSHSRRNLSSSEDELDESRL-SQVAP------EERLTL 746
Query: 203 VIKKSMFEKMKIVGQFNLGFII 224
+ K F +M+I GQFNLGFI+
Sbjct: 747 TVNKDDFARMRIHGQFNLGFIL 768
Score = 57 (25.1 bits), Expect = 2.7e-33, Sum P(3) = 2.7e-33
Identities = 28/125 (22%), Positives = 48/125 (38%)
Query: 65 FTVDGNNMN--QSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSP 122
F G+ M+ S EQ+ D D E+++ S+ HE + + + E +++
Sbjct: 561 FAAPGSQMSTHDSDEQESFEDEDEEEVEESDGV---HEDLEAEAGKETESEVEDQVEEEV 617
Query: 123 ETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVEN 182
E E P DD + Q+ P D+ ++ K R + Q R +E
Sbjct: 618 EEAESFVPS------DDNATQSDEHTQTEPQPAKEDMNAEEKKRR---EDAEVQ-RLIEE 667
Query: 183 RFHAN 187
AN
Sbjct: 668 AGKAN 672
Score = 51 (23.0 bits), Expect = 1.1e-32, Sum P(3) = 1.1e-32
Identities = 20/94 (21%), Positives = 44/94 (46%)
Query: 113 SHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRT 172
+H+++ Q+S E + + +E+ V +D+ G +S D ++++++ A
Sbjct: 570 THDSDEQESFEDEDEEEVEESDGVHEDLEAEAGKETESEVE----DQVEEEVEE--AESF 623
Query: 173 VQAQDRCVENRFHANIDPSKNKEAESELNRVIKK 206
V + D ++ H +P KE ++N KK
Sbjct: 624 VPSDDNATQSDEHTQTEPQPAKE---DMNAEEKK 654
Score = 40 (19.1 bits), Expect = 3.8e-40, Sum P(3) = 3.8e-40
Identities = 8/31 (25%), Positives = 16/31 (51%)
Query: 185 HANIDPSKNKEAESELNRVIKKSMFEKMKIV 215
H +++ KE ESE+ +++ + E V
Sbjct: 594 HEDLEAEAGKETESEVEDQVEEEVEEAESFV 624
Score = 38 (18.4 bits), Expect = 3.1e-37, Sum P(3) = 3.1e-37
Identities = 7/27 (25%), Positives = 14/27 (51%)
Query: 35 TPDKRQIFMDHEKLLLATVKVHITDSY 61
TPD++ +F++ L + I + Y
Sbjct: 266 TPDRQMLFVNSRPCALPQITKAINEVY 292
>UNIPROTKB|Q755U7 [details] [associations]
symbol:AER421W "AER421Wp" species:284811 "Ashbya gossypii
ATCC 10895" [GO:0003697 "single-stranded DNA binding" evidence=IBA]
[GO:0006200 "ATP catabolic process" evidence=IBA] [GO:0006298
"mismatch repair" evidence=IBA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IBA] [GO:0016887 "ATPase activity"
evidence=IBA] [GO:0032300 "mismatch repair complex" evidence=IBA]
[GO:0032389 "MutLalpha complex" evidence=IBA] [GO:0032407
"MutSalpha complex binding" evidence=IBA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 EMBL:AE016818
GenomeReviews:AE016818_GR GO:GO:0032407 GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
PANTHER:PTHR10073:SF9 KO:K10858 HOGENOM:HOG000165474 OMA:LDKPWNC
OrthoDB:EOG4FFH9B RefSeq:NP_985276.1 ProteinModelPortal:Q755U7
STRING:Q755U7 EnsemblFungi:AAS53100 GeneID:4621495
KEGG:ago:AGOS_AER421W PhylomeDB:Q755U7 Uniprot:Q755U7
Length = 903
Score = 410 (149.4 bits), Expect = 2.7e-37, P = 2.7e-37
Identities = 107/317 (33%), Positives = 169/317 (53%)
Query: 78 QDPSSDVDMEKIQRSNSEEVEHE----TIPVP--SEDNSNFSHEANLQQSPETVEPDTPD 131
+D ++ ++E R+ +EE + + P+ S+ S + + + T P
Sbjct: 561 RDVGTEDELEPGNRTYAEESQEDMSDRAAPLEFMSDKKSRPCNSCSAENEDSTFGGTAPP 620
Query: 132 ET--IEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENR--FHAN 187
E+ + + D L G+ T ++ I + K + + QDR + + N
Sbjct: 621 ESQRTQSVPDRKPLVGNALPETQCLVTC-INANLEKIVETMQVISEQDRSSNHTTSYSRN 679
Query: 188 IDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIV----KYDSDLFIIDQHATDEKY 243
D AE+ L + K F++M I+GQFNLGFIIV + DLFI+DQHA+DEKY
Sbjct: 680 EDFEDAINAENYLTLTVSKRDFKEMSIIGQFNLGFIIVARRAENKHDLFIVDQHASDEKY 739
Query: 244 NFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSD-DGN-VLL 301
NFE LQK+T+ SQ L+ P + L+ I++ ++ +NLP+F KNGF+ + + G+ + L
Sbjct: 740 NFENLQKSTVFNSQHLIKPLTVELSVIDELLVLENLPLFKKNGFKIRVNEAQKQGSRIEL 799
Query: 302 TSLPMSKNTTLGREDIEELLFMLQHTNSTEH--CRPSRIRAMFASRACRKSVMIGRALSV 359
T +P SK T ED ELL +L+ + S+IR+MFA RACR S+MIG+ L+
Sbjct: 800 TGMPTSKQTIFDIEDFYELLSLLKECDGVNKNSIACSKIRSMFAMRACRMSIMIGKPLTR 859
Query: 360 GEMTGLVRNMGRIDQPW 376
MT +VR + +D+PW
Sbjct: 860 RTMTEVVRKLSELDKPW 876
Score = 150 (57.9 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 46/151 (30%), Positives = 75/151 (49%)
Query: 1 MKLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
+K N++Y FNN QYP IILN E+S VDVNVTPDKR + + +E+ +L ++ + D
Sbjct: 297 LKCCNDIYRSFNNVQYPVIILNFELSPQFVDVNVTPDKRTVLLHNEEYVLQSLAEKL-DG 355
Query: 61 YAIGFTVDGNNMNQSMEQDPSSDVDME-KIQRSNSEEVEHETIPVPSEDN-SNFSHEANL 118
+ F + +S+ P D E K++R + E I +D+ N + + +
Sbjct: 356 H---FNEQELMLPKSLPSLPVPHQDSELKVKRRKLVPSQ-ELIGTFEDDHLHNTTTCSEI 411
Query: 119 QQSPETVEPDTPDETIEVIDDMPRLQGSYRQ 149
+ +E ++ I IDD+ S Q
Sbjct: 412 TACSQPMEEES--SVIVAIDDIDECDTSSAQ 440
>UNIPROTKB|Q7SAM1 [details] [associations]
symbol:NCU08020 "Putative uncharacterized protein"
species:367110 "Neurospora crassa OR74A" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032407 "MutSalpha complex
binding" evidence=IBA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR015434
Pfam:PF08676 SMART:SM00387 SMART:SM00853 Prosite:PS00058
GO:GO:0005524 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 GO:GO:0007131
GO:GO:0032407 GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 KO:K10858
HOGENOM:HOG000165474 OrthoDB:EOG4FFH9B EMBL:AABX02000051
OMA:SDFAKMK RefSeq:XP_962690.2 UniGene:Ncr.24794
ProteinModelPortal:Q7SAM1 STRING:Q7SAM1
EnsemblFungi:EFNCRT00000008289 GeneID:3878856 KEGG:ncr:NCU08020
Uniprot:Q7SAM1
Length = 894
Score = 376 (137.4 bits), Expect = 2.2e-36, Sum P(2) = 2.2e-36
Identities = 80/157 (50%), Positives = 109/157 (69%)
Query: 228 DSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGF 287
D +LFIIDQHA+DEKYNFE LQ TT ++SQ+LV P+ L LT + + I+ ++LP NGF
Sbjct: 662 DDELFIIDQHASDEKYNFERLQSTTTVQSQRLVQPKPLTLTAVEEEIILEHLPALAANGF 721
Query: 288 EFSFDSSDDGNV----LLTSLPMSKNTTLGREDIEELLFML--QHTNS--TEHCRPSRIR 339
+ D+S + V L SLP+S+ TT G D+EEL+F+L T+S T RPS++R
Sbjct: 722 QVRVDTSGESAVGSRCQLLSLPLSRETTFGVADLEELIFLLGDNPTSSATTAIPRPSKVR 781
Query: 340 AMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
MFA RACR S+MIGRALS +M +VR+MG +++PW
Sbjct: 782 KMFAMRACRSSIMIGRALSRPQMEKVVRHMGEMEKPW 818
Score = 52 (23.4 bits), Expect = 2.2e-36, Sum P(2) = 2.2e-36
Identities = 22/94 (23%), Positives = 35/94 (37%)
Query: 106 SEDNSNFSHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLK 165
+E N H N + S E V + D + P+ + +STP L
Sbjct: 261 TEGNRATRHAVN-EDSDEAVSDE--DNAPNTLSTGPKTRAGPCESTPANTQAS----NLL 313
Query: 166 ARYARRTVQAQDRCVENRFHANIDPSKNKEAESE 199
AR+ R +A+ + V +AN + E E
Sbjct: 314 ARWLERKSEARKQPVSAAINANDSRREKSPVEKE 347
Score = 48 (22.0 bits), Expect = 5.7e-36, Sum P(2) = 5.7e-36
Identities = 14/70 (20%), Positives = 32/70 (45%)
Query: 68 DGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEP 127
D +E++P S ++ +R ++++ E + +EDN + + + Q + E
Sbjct: 336 DSRREKSPVEKEPQSP---KRARRYDTKDAESDAEQDTAEDNEHVENNSMTQDVVDDKEM 392
Query: 128 DTPDETIEVI 137
D + T+ I
Sbjct: 393 DRQELTMPSI 402
>DICTYBASE|DDB_G0283981 [details] [associations]
symbol:pms1 "MutL DNA mismatch repair protein"
species:44689 "Dictyostelium discoideum" [GO:0032389 "MutLalpha
complex" evidence=IEA;IBA] [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA;ISS;IBA]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0016887 "ATPase
activity" evidence=ISS;IBA] [GO:0006200 "ATP catabolic process"
evidence=ISS;IBA] [GO:0003677 "DNA binding" evidence=ISS]
[GO:0032407 "MutSalpha complex binding" evidence=IBA] [GO:0032300
"mismatch repair complex" evidence=IBA] [GO:0007131 "reciprocal
meiotic recombination" evidence=IBA] [GO:0003697 "single-stranded
DNA binding" evidence=IBA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 dictyBase:DDB_G0283981 Prosite:PS00058 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 EMBL:AAFI02000058 eggNOG:COG0323 GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
PANTHER:PTHR10073:SF9 HSSP:P54278 RefSeq:XP_638844.1
ProteinModelPortal:Q54QA0 STRING:Q54QA0 EnsemblProtists:DDB0232417
GeneID:8624368 KEGG:ddi:DDB_G0283981 KO:K10858 OMA:TINECED
ProtClustDB:CLSZ2846737 Uniprot:Q54QA0
Length = 1022
Score = 376 (137.4 bits), Expect = 1.6e-33, P = 1.6e-33
Identities = 104/327 (31%), Positives = 165/327 (50%)
Query: 66 TVDGNNMNQSMEQDPSSDVDMEKIQRS----NS--EEVEHETIP----VPSEDNSNFSHE 115
T+DG S D + D+ I + N ++ + IP V S D+ ++
Sbjct: 672 TIDGYKQKNSKTFDITIKTDLNTISKQYLIRNGTFDKDNNPIIPNTALVVSNDDMVVNNN 731
Query: 116 ANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQA 175
+ + ++ T ++ V +P+L G + ST + + Q Q A +Q
Sbjct: 732 NSNEFDQNSIITTTSEKCCIVDKSIPQLDGKF--STSLG-GIGAKQQQKAATQVTSQLQQ 788
Query: 176 QDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIID 235
Q + K AE EL + KK F++M ++GQFNLGFII K +DLFIID
Sbjct: 789 QP-----------SQTNQKTAEEELTKFFKKEYFKQMIVIGQFNLGFIIAKLGNDLFIID 837
Query: 236 QHATDEKYNFETLQKT--TLIKSQKLVVPQNLH-LTKINQCILKDNLPVFYKNGFEF--S 290
QHA DEKYNFE L K+ + I SQ L+ P L LT + I+ +N+ +F KNGF+F
Sbjct: 838 QHAADEKYNFEILSKSVESSINSQPLLKPDTLSDLTSEEELIIIENVDLFKKNGFKFIID 897
Query: 291 FDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRP-SRIRAMFASRACRK 349
D+ + L++ P+ + G +DI E +FM++ ++ R+ ++ AS+ACRK
Sbjct: 898 HDAPTRFKIKLSAFPIIHGQSFGIKDIYEWIFMIKESSIPGSVNKIPRLNSLLASKACRK 957
Query: 350 SVMIGRALSVGEMTGLVRNMGRIDQPW 376
S+M+G L+ EM ++ N+ +D PW
Sbjct: 958 SIMVGTTLTHKEMKDVLNNLSTLDNPW 984
Score = 140 (54.3 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 44/137 (32%), Positives = 69/137 (50%)
Query: 2 KLVNEVYHQFNNH-QYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEK--LLLAT--VKV- 55
K +N +Y F+ YP +I NIEM ++ DVNVTPDKR IF+ E+ LLL T +K
Sbjct: 313 KEINSLYQSFHKRGSYPVVIFNIEMPTNNYDVNVTPDKRTIFIQKEQQLLLLITDGLKTM 372
Query: 56 -----HITDSYAIG-FTVDGNNMNQSMEQDPSSDVD-MEKIQRSNSEEVEHET-IPVPSE 107
+ D+ +G FT + N N + + S + + +EE E+ I P +
Sbjct: 373 WETAQSVFDTNQLGQFTFNDENENDNSNNNKQSKISSFPNLYTLKTEEDENNNKITTPIK 432
Query: 108 DNSNFSHEANLQQSPET 124
+S + ++L SP +
Sbjct: 433 KHSTTTTTSSLN-SPSS 448
>POMBASE|SPAC19G12.02c [details] [associations]
symbol:pms1 "MutL family mismatch-repair protein Pms1"
species:4896 "Schizosaccharomyces pombe" [GO:0000228 "nuclear
chromosome" evidence=ISO] [GO:0003677 "DNA binding" evidence=ISO]
[GO:0005524 "ATP binding" evidence=ISO] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006298 "mismatch repair" evidence=IGI;IMP]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0030983 "mismatched
DNA binding" evidence=IEA] [GO:0032389 "MutLalpha complex"
evidence=IEA] [GO:0043570 "maintenance of DNA repeat elements"
evidence=IMP] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF02518 Pfam:PF08676
SMART:SM00387 SMART:SM00853 PomBase:SPAC19G12.02c Prosite:PS00058
GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0016887
GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0000228 GO:GO:0043570 eggNOG:COG0323
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
PANTHER:PTHR10073:SF9 KO:K10858 EMBL:X96581 PIR:T37989
RefSeq:NP_594417.1 ProteinModelPortal:P54280 STRING:P54280
EnsemblFungi:SPAC19G12.02c.1 GeneID:2542582 KEGG:spo:SPAC19G12.02c
HOGENOM:HOG000165474 OMA:LDKPWNC OrthoDB:EOG4FFH9B NextBio:20803632
Uniprot:P54280
Length = 794
Score = 367 (134.2 bits), Expect = 8.4e-33, P = 8.4e-33
Identities = 102/315 (32%), Positives = 160/315 (50%)
Query: 70 NNMNQSMEQDPS-SDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPD 128
+N N + DPS + + K N E H +E S S +Q+ +V
Sbjct: 479 SNPNNLLLNDPSPASTPVAKTINLNEIESVHN-----AESVSTLSSIPRTEQT--SVANR 531
Query: 129 TPDET-----IEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENR 183
P +T ++ P L G + S + +SL +Q + R + N+
Sbjct: 532 IPSKTAALQKLKFFQSRP-LDGLNKFSKKINISLSGVQKDI----VRSDALLK---FSNK 583
Query: 184 FHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKY 243
D S + E LN + K+ F +M++VGQFN GFI+V + ++LFIIDQHA+DEK+
Sbjct: 584 IGVVHDISDENQ-EDHLNLTVHKADFLRMRVVGQFNRGFIVVVHGNNLFIIDQHASDEKF 642
Query: 244 NFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDD-GN-VLL 301
N+E L+ +I SQ LV+P+ L L + +L D++ + + GF + D + GN L
Sbjct: 643 NYEHLKSNLVINSQDLVLPKRLDLAATEETVLIDHIDLIRRKGFGVAIDLNQRVGNRCTL 702
Query: 302 TSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGE 361
S+P SKN D+ E++ +L + SR+ M AS+ACR SVMIGRAL++ E
Sbjct: 703 LSVPTSKNVIFDTSDLLEIISVLSEHPQIDPFS-SRLERMLASKACRSSVMIGRALTISE 761
Query: 362 MTGLVRNMGRIDQPW 376
M +VR++ + +PW
Sbjct: 762 MNTIVRHLAELSKPW 776
Score = 127 (49.8 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 48/203 (23%), Positives = 102/203 (50%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVK---VHIT 58
+++ EV+ ++ Q PF +N+ ++ ++D+NV+PDK+ +F+ E ++ +K ++
Sbjct: 272 RVIQEVFKPYSMAQSPFFAINLRITNGTIDINVSPDKKSVFLSEEDSIIEFIKNSLQNLC 331
Query: 59 DS--YAIGFTVDGNNMNQSME-QDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHE 115
+S +AI + + + S + D S D +++ +S E ET D+S+FS++
Sbjct: 332 ESCGHAISCSRSQSIFSYSSQIPDSSGDSTDQELPQS-IPATESET-----SDDSSFSYK 385
Query: 116 AN--LQQSPE-TVEPDTPDETIE------VIDDMP-RLQ-GSYRQSTPVTLSLDIIQDQL 164
+ ++ E T +P E V +P RLQ S R+S+P+ + +++
Sbjct: 386 RSPCKRKLVEATAQPAISTSVAEGASLAQVSKPLPERLQKDSMRRSSPLNEKVTASSERM 445
Query: 165 K---ARYARRTVQAQDRCVENRF 184
K A +A T + + +++ F
Sbjct: 446 KKKLALFASSTDTSMQKTIDSSF 468
>UNIPROTKB|Q22B61 [details] [associations]
symbol:TTHERM_01109940 "DNA mismatch repair protein,
C-terminal domain containing protein" species:312017 "Tetrahymena
thermophila SB210" [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0006200 "ATP catabolic process" evidence=IBA]
[GO:0006298 "mismatch repair" evidence=IBA] [GO:0007131 "reciprocal
meiotic recombination" evidence=IBA] [GO:0016887 "ATPase activity"
evidence=IBA] [GO:0032300 "mismatch repair complex" evidence=IBA]
[GO:0032389 "MutLalpha complex" evidence=IBA] [GO:0032407
"MutSalpha complex binding" evidence=IBA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
GO:GO:0016887 GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 KO:K10858
ProtClustDB:CLSZ2846737 EMBL:GG662565 RefSeq:XP_001030203.2
UniGene:Tth.6164 ProteinModelPortal:Q22B61 EnsemblProtists:EAR82540
GeneID:7840245 KEGG:tet:TTHERM_01109940 Uniprot:Q22B61
Length = 946
Score = 325 (119.5 bits), Expect = 4.1e-28, P = 4.1e-28
Identities = 95/318 (29%), Positives = 162/318 (50%)
Query: 68 DGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEP 127
D +N E++ + SNS+ E++ SED+S + + +Q+ + +
Sbjct: 614 DNQKINNEDEENCDDQCCTQSQNYSNSQN-EYK-----SEDSSLYKMKEE-KQTKQLKQS 666
Query: 128 DTPDETIEV---IDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRF 184
+E ++ I + R+ + + + + I QDQ +A + + +D +E
Sbjct: 667 LNQEELVQKHFQIQEEARILNKKQNNELMEIDEKIDQDQGRAFKIKS--KKEDE-IEELA 723
Query: 185 HANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKY-DSD-LFIIDQHATDEK 242
+ K E+E KK F +++I+GQFN FII + + D +F+IDQHA+DEK
Sbjct: 724 DDLEEQLKTWESED-----FKKDKFVELQIIGQFNKAFIIAYWVEKDQIFLIDQHASDEK 778
Query: 243 YNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFS--FDSSD-DGNV 299
N+E L K + QKLV P L LT IL++N +F KNGF+F +D S+ + N+
Sbjct: 779 TNYERLLKENNFQGQKLVKPIELSLTIQEADILENNREIFKKNGFQFQIKYDESNGEPNL 838
Query: 300 LLTSLPMSKNTTLGREDIEELLFMLQHTNST-EHCRPSRIRAMFASRACRKSVMIGRALS 358
+ LP SK+ D +E+ + + + E RP +I+ + AS+ACR S+MIG AL+
Sbjct: 839 YINQLPSSKHIQFNINDFDEIFQNINNEETDIETFRPKKIQRILASKACRSSIMIGTALN 898
Query: 359 VGEMTGLVRNMGRIDQPW 376
M ++ N+ ++ PW
Sbjct: 899 KSSMKQILLNLSKLQSPW 916
>UNIPROTKB|A8IT98 [details] [associations]
symbol:CHLREDRAFT_101121 "Predicted protein" species:3055
"Chlamydomonas reinhardtii" [GO:0003697 "single-stranded DNA
binding" evidence=IBA] [GO:0006200 "ATP catabolic process"
evidence=IBA] [GO:0006298 "mismatch repair" evidence=IBA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IBA]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0032300 "mismatch
repair complex" evidence=IBA] [GO:0032389 "MutLalpha complex"
evidence=IBA] [GO:0032407 "MutSalpha complex binding" evidence=IBA]
InterPro:IPR002099 InterPro:IPR014790 InterPro:IPR015434
Pfam:PF08676 SMART:SM00853 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 GO:GO:0003697 GO:GO:0030983 GO:GO:0007131
GO:GO:0032407 eggNOG:COG0323 GO:GO:0032389 PANTHER:PTHR10073
PANTHER:PTHR10073:SF9 KO:K10858 EMBL:DS496122 RefSeq:XP_001692227.1
EnsemblPlants:EDP04177 GeneID:5717917 KEGG:cre:CHLREDRAFT_101121
ProtClustDB:CLSN2921379 Uniprot:A8IT98
Length = 193
Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 59/170 (34%), Positives = 93/170 (54%)
Query: 213 KIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLH---LTK 269
+++GQFNLGFI+ + D+FI+DQHA DEK FE LQ++ + Q L+ P L L
Sbjct: 2 QVLGQFNLGFILAAHGRDVFIVDQHAADEKTTFERLQRSVALTRQPLLAPMPLPPGLLLP 61
Query: 270 INQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNS 329
++Q ++++++ VF +NGF+F + G L +P L F++
Sbjct: 62 LDQLLIREHIDVFRRNGFDF-VQRTPAGR--LVPVPSPAPAPAPAPAPLSLAFVIYSPVR 118
Query: 330 TEHCRPS---RIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
P+ R+RAM ASRACR S+M+GR L +M ++ + + QPW
Sbjct: 119 VRSPPPNPDPRVRAMLASRACRSSIMVGRPLDRPQMRRVLDRLAELRQPW 168
>GENEDB_PFALCIPARUM|MAL7P1.145 [details] [associations]
symbol:MAL7P1.145 "mismatch repair protein
pms1 homologue, putative" species:5833 "Plasmodium falciparum"
[GO:0003684 "damaged DNA binding" evidence=ISS] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0003684
GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:AL844506 HSSP:P23367 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9
RefSeq:XP_001349161.1 ProteinModelPortal:Q8IBJ3 IntAct:Q8IBJ3
MINT:MINT-1637001 EnsemblProtists:MAL7P1.145:mRNA GeneID:2655088
KEGG:pfa:MAL7P1.145 EuPathDB:PlasmoDB:PF3D7_0726300 Uniprot:Q8IBJ3
Length = 1330
Score = 132 (51.5 bits), Expect = 4.2e-19, Sum P(5) = 4.2e-19
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVK 54
KL+N +Y +FN+ YP II NI ++D+NVTPDKR++F E+ + +K
Sbjct: 277 KLINTIYREFNSRLYPIIICNILSDTKNIDINVTPDKREVFFTFEQEMCEHMK 329
Score = 126 (49.4 bits), Expect = 4.2e-19, Sum P(5) = 4.2e-19
Identities = 26/58 (44%), Positives = 37/58 (63%)
Query: 231 LFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFE 288
LFIIDQHA DEK NFE K +KSQKL+ ++ ++ I++ + +F +NGFE
Sbjct: 1065 LFIIDQHAADEKSNFEKYNKIFTMKSQKLISKIHVQVSPAQVHIIQKYMSIFLQNGFE 1122
Score = 99 (39.9 bits), Expect = 2.9e-15, Sum P(4) = 2.9e-15
Identities = 48/236 (20%), Positives = 102/236 (43%)
Query: 5 NEVY-HQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAI 63
N +Y ++ NN I +++ D D N T + ++ D + K++ DS
Sbjct: 789 NTIYEYKLNNDDSNNTIYEYKLNND--DSNNTIYEYKLNNDDSNNTIYEYKLNSDDSNNT 846
Query: 64 GFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPE 123
+ ++G N+ E+ D++ + E+++ + S + N+ + E
Sbjct: 847 PY-LNGQEKNEETEEGN----DLKDCTNYSFEDLKEN---IKSNCIKKIPIDINMYINRE 898
Query: 124 TVEPDTPDETIEVID--DMPRLQG----SYRQSTPVTLSLDIIQDQLKARY-----ARRT 172
++ + I VI+ + +++ ++ TP+ L + DQ + Y +
Sbjct: 899 ELKSGFDYDQIHVINLTNSEKIKNIIFQKMKEETPINNYLCLTDDQEEKEYKNLFDGNLS 958
Query: 173 VQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYD 228
++ + N + N D + + E++ + + S+F K+KI GQFN GF+I K D
Sbjct: 959 LKESNNNNTNNVNNNEDINFSNIDETQKDLYFQSSLFNKLKICGQFNKGFVISKID 1014
Score = 98 (39.6 bits), Expect = 4.2e-19, Sum P(5) = 4.2e-19
Identities = 15/43 (34%), Positives = 29/43 (67%)
Query: 334 RPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
RP ++ + AS+ACR ++M+G+AL++ EM + + + + PW
Sbjct: 1217 RPQKVWRILASKACRNAIMVGKALNIYEMIKIKKKLSFLKNPW 1259
Score = 51 (23.0 bits), Expect = 3.7e-11, Sum P(4) = 3.7e-11
Identities = 42/243 (17%), Positives = 97/243 (39%)
Query: 80 PSSDVDMEKIQRSNSEEVEH-----ETIPVPSEDNSNFSHEANLQQSPETVEPDTPDETI 134
P+ ++ +++ R N+ + + + IP ++ N+N + + S + D +
Sbjct: 488 PNKYIENDELYRDNTSSLSYTLSQKDYIPTENKMNNNIQIKNDELNSSSLFQNDDYN--- 544
Query: 135 EVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKNK 194
++ R S+ ST ++ D+ K +Y + ++ VEN+ + +N
Sbjct: 545 --FSNIYRANHSFT-STQESMHCDLFVSGNKKQYENSEKEKNEKNVENKKNTEYTFFRNN 601
Query: 195 EAESELNRVIKKS--MF-----EKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFET 247
E + + IKK F E++ G ++ ++++ + + F D + +Y
Sbjct: 602 EEQK--SGYIKKGGEEFNTYNDEEIYSSGPLSIDNVMMENNKEHFS-DMNNNVYEYKLNN 658
Query: 248 LQKTTLIKSQKLV---VPQNLHLTKINQCILKDNLPVFYKNG-------FEFSFDSSDDG 297
I KL N++ K+N K+N+ + N +E+ ++ D
Sbjct: 659 DDTKNNIYEYKLNSDDTKNNIYEYKLNNDDTKNNIYEYKLNNDDTKNNIYEYKLNNDDSN 718
Query: 298 NVL 300
N +
Sbjct: 719 NTI 721
Score = 42 (19.8 bits), Expect = 4.2e-19, Sum P(5) = 4.2e-19
Identities = 26/138 (18%), Positives = 54/138 (39%)
Query: 70 NNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDT 129
N+ + E++ + + E N+EE + I E+ + ++ E P +++
Sbjct: 577 NSEKEKNEKNVENKKNTEYTFFRNNEEQKSGYIKKGGEEFNTYNDEEIYSSGPLSIDNVM 636
Query: 130 PDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQA----QDRCVEN--R 183
+ E DM Y+ + T + +I + +L + + + D N
Sbjct: 637 MENNKEHFSDMNNNVYEYKLNNDDTKN-NIYEYKLNSDDTKNNIYEYKLNNDDTKNNIYE 695
Query: 184 FHANIDPSKNKEAESELN 201
+ N D +KN E +LN
Sbjct: 696 YKLNNDDTKNNIYEYKLN 713
Score = 40 (19.1 bits), Expect = 4.2e-19, Sum P(5) = 4.2e-19
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 298 NVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEH 332
NV L SLP+ L ++ + + +L H TEH
Sbjct: 1156 NVYLLSLPVFNGKIL---EVVDFMSLLHHL--TEH 1185
>UNIPROTKB|Q8IBJ3 [details] [associations]
symbol:MAL7P1.145 "Mismatch repair protein pms1 homologue,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0003684
"damaged DNA binding" evidence=ISS] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0003684
GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:AL844506 HSSP:P23367 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9
RefSeq:XP_001349161.1 ProteinModelPortal:Q8IBJ3 IntAct:Q8IBJ3
MINT:MINT-1637001 EnsemblProtists:MAL7P1.145:mRNA GeneID:2655088
KEGG:pfa:MAL7P1.145 EuPathDB:PlasmoDB:PF3D7_0726300 Uniprot:Q8IBJ3
Length = 1330
Score = 132 (51.5 bits), Expect = 4.2e-19, Sum P(5) = 4.2e-19
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVK 54
KL+N +Y +FN+ YP II NI ++D+NVTPDKR++F E+ + +K
Sbjct: 277 KLINTIYREFNSRLYPIIICNILSDTKNIDINVTPDKREVFFTFEQEMCEHMK 329
Score = 126 (49.4 bits), Expect = 4.2e-19, Sum P(5) = 4.2e-19
Identities = 26/58 (44%), Positives = 37/58 (63%)
Query: 231 LFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFE 288
LFIIDQHA DEK NFE K +KSQKL+ ++ ++ I++ + +F +NGFE
Sbjct: 1065 LFIIDQHAADEKSNFEKYNKIFTMKSQKLISKIHVQVSPAQVHIIQKYMSIFLQNGFE 1122
Score = 99 (39.9 bits), Expect = 2.9e-15, Sum P(4) = 2.9e-15
Identities = 48/236 (20%), Positives = 102/236 (43%)
Query: 5 NEVY-HQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAI 63
N +Y ++ NN I +++ D D N T + ++ D + K++ DS
Sbjct: 789 NTIYEYKLNNDDSNNTIYEYKLNND--DSNNTIYEYKLNNDDSNNTIYEYKLNSDDSNNT 846
Query: 64 GFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPE 123
+ ++G N+ E+ D++ + E+++ + S + N+ + E
Sbjct: 847 PY-LNGQEKNEETEEGN----DLKDCTNYSFEDLKEN---IKSNCIKKIPIDINMYINRE 898
Query: 124 TVEPDTPDETIEVID--DMPRLQG----SYRQSTPVTLSLDIIQDQLKARY-----ARRT 172
++ + I VI+ + +++ ++ TP+ L + DQ + Y +
Sbjct: 899 ELKSGFDYDQIHVINLTNSEKIKNIIFQKMKEETPINNYLCLTDDQEEKEYKNLFDGNLS 958
Query: 173 VQAQDRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYD 228
++ + N + N D + + E++ + + S+F K+KI GQFN GF+I K D
Sbjct: 959 LKESNNNNTNNVNNNEDINFSNIDETQKDLYFQSSLFNKLKICGQFNKGFVISKID 1014
Score = 98 (39.6 bits), Expect = 4.2e-19, Sum P(5) = 4.2e-19
Identities = 15/43 (34%), Positives = 29/43 (67%)
Query: 334 RPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
RP ++ + AS+ACR ++M+G+AL++ EM + + + + PW
Sbjct: 1217 RPQKVWRILASKACRNAIMVGKALNIYEMIKIKKKLSFLKNPW 1259
Score = 51 (23.0 bits), Expect = 3.7e-11, Sum P(4) = 3.7e-11
Identities = 42/243 (17%), Positives = 97/243 (39%)
Query: 80 PSSDVDMEKIQRSNSEEVEH-----ETIPVPSEDNSNFSHEANLQQSPETVEPDTPDETI 134
P+ ++ +++ R N+ + + + IP ++ N+N + + S + D +
Sbjct: 488 PNKYIENDELYRDNTSSLSYTLSQKDYIPTENKMNNNIQIKNDELNSSSLFQNDDYN--- 544
Query: 135 EVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKNK 194
++ R S+ ST ++ D+ K +Y + ++ VEN+ + +N
Sbjct: 545 --FSNIYRANHSFT-STQESMHCDLFVSGNKKQYENSEKEKNEKNVENKKNTEYTFFRNN 601
Query: 195 EAESELNRVIKKS--MF-----EKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFET 247
E + + IKK F E++ G ++ ++++ + + F D + +Y
Sbjct: 602 EEQK--SGYIKKGGEEFNTYNDEEIYSSGPLSIDNVMMENNKEHFS-DMNNNVYEYKLNN 658
Query: 248 LQKTTLIKSQKLV---VPQNLHLTKINQCILKDNLPVFYKNG-------FEFSFDSSDDG 297
I KL N++ K+N K+N+ + N +E+ ++ D
Sbjct: 659 DDTKNNIYEYKLNSDDTKNNIYEYKLNNDDTKNNIYEYKLNNDDTKNNIYEYKLNNDDSN 718
Query: 298 NVL 300
N +
Sbjct: 719 NTI 721
Score = 42 (19.8 bits), Expect = 4.2e-19, Sum P(5) = 4.2e-19
Identities = 26/138 (18%), Positives = 54/138 (39%)
Query: 70 NNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDT 129
N+ + E++ + + E N+EE + I E+ + ++ E P +++
Sbjct: 577 NSEKEKNEKNVENKKNTEYTFFRNNEEQKSGYIKKGGEEFNTYNDEEIYSSGPLSIDNVM 636
Query: 130 PDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQA----QDRCVEN--R 183
+ E DM Y+ + T + +I + +L + + + D N
Sbjct: 637 MENNKEHFSDMNNNVYEYKLNNDDTKN-NIYEYKLNSDDTKNNIYEYKLNNDDTKNNIYE 695
Query: 184 FHANIDPSKNKEAESELN 201
+ N D +KN E +LN
Sbjct: 696 YKLNNDDTKNNIYEYKLN 713
Score = 40 (19.1 bits), Expect = 4.2e-19, Sum P(5) = 4.2e-19
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 298 NVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEH 332
NV L SLP+ L ++ + + +L H TEH
Sbjct: 1156 NVYLLSLPVFNGKIL---EVVDFMSLLHHL--TEH 1185
>UNIPROTKB|Q7RPM0 [details] [associations]
symbol:PY01438 "DNA mismatch repair protein, C-terminal
domain, putative" species:73239 "Plasmodium yoelii yoelii"
[GO:0003697 "single-stranded DNA binding" evidence=IBA] [GO:0006200
"ATP catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032407 "MutSalpha complex
binding" evidence=IBA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
eggNOG:COG0323 GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 HSSP:P54278 KO:K10858
EMBL:AABL01000381 RefSeq:XP_729204.1 ProteinModelPortal:Q7RPM0
GeneID:3801758 KEGG:pyo:PY01438 EuPathDB:PlasmoDB:PY01438
Uniprot:Q7RPM0
Length = 1157
Score = 137 (53.3 bits), Expect = 2.3e-18, Sum P(3) = 2.3e-18
Identities = 23/56 (41%), Positives = 35/56 (62%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHI 57
K++N +Y +FN+ YP II NI ++D+NVTPDKR++F E L +K +
Sbjct: 277 KIINTIYREFNSRLYPIIIFNILSDSKNIDINVTPDKREVFFTFENELCEEIKTEL 332
Score = 135 (52.6 bits), Expect = 2.3e-18, Sum P(3) = 2.3e-18
Identities = 29/58 (50%), Positives = 36/58 (62%)
Query: 231 LFIIDQHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFE 288
LFIIDQHA DEK NFE K +KSQKL+ L L+ I++ N +F +NGFE
Sbjct: 871 LFIIDQHAADEKSNFEKYNKIFTMKSQKLINKIELELSPAQIHIIEKNFVIFLRNGFE 928
Score = 80 (33.2 bits), Expect = 9.3e-13, Sum P(3) = 9.3e-13
Identities = 27/102 (26%), Positives = 42/102 (41%)
Query: 197 ESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFII--------DQHATDEKYNFETL 248
E + + K ++F+K+KI GQFN GFI+ K D F D + TDE N +
Sbjct: 807 EQKKDLYFKSNLFKKLKICGQFNKGFILSKIDLLYFKNEDNKSKNNDMNETDENENVDRK 866
Query: 249 QKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFS 290
L + + + K N+ + + K E S
Sbjct: 867 NNYALFIIDQHAADEKSNFEKYNKIFTMKSQKLINKIELELS 908
Score = 78 (32.5 bits), Expect = 2.3e-18, Sum P(3) = 2.3e-18
Identities = 13/36 (36%), Positives = 23/36 (63%)
Query: 341 MFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+F S ACR +VM+G+ L++ EM + + + + PW
Sbjct: 1052 LFVS-ACRNAVMVGKTLNISEMIRIKKKLSVLQNPW 1086
Score = 47 (21.6 bits), Expect = 2.0e-09, Sum P(3) = 2.0e-09
Identities = 44/237 (18%), Positives = 92/237 (38%)
Query: 90 QRSNSEEVEHETIPVPSEDNSNFSHEANLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQ 149
++S E E+ + P +N H ++ T +E E D + R + S +
Sbjct: 396 RQSERAEGEYTNVGRPVFENEEL-HYTSIDYKKMVKNEYTENEENEENDKIFREEVSKNE 454
Query: 150 STPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHANIDPSKNKEAESEL--NRVIKKS 207
T +L + Q K Y + +D E+ + I + E E + +
Sbjct: 455 DTE---NLYFSEGQNK--YDNKMANQKDNNFEDAEKSYISNGIKIKTEFEKFDDNEHNEY 509
Query: 208 MFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQK---TTLIKSQK-LVVPQ 263
++ KIV + + KY+ D D++ D N ++ K ++LI S+ ++
Sbjct: 510 TSKRTKIVKDEQVEYYEYKYEEDTNFNDKNIFDNSSNMDSKWKEINSSLIDSKDGKILSD 569
Query: 264 NLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEEL 320
+ + K + KD + N S+ + + T + +N + ++I+E+
Sbjct: 570 DSSVDKTKVDVKKDTFSKYGLNKIGIKKTGSEY-DAIKTKVTKEQNES--EDEIKEI 623
Score = 46 (21.3 bits), Expect = 2.5e-09, Sum P(3) = 2.5e-09
Identities = 9/33 (27%), Positives = 21/33 (63%)
Query: 288 EFSFDSSDDG--NVLLTSLPMSKNTTLGREDIE 318
E+ F+ + N ++ ++P++ NT + RED++
Sbjct: 684 EYLFEKLKENIKNNIIKNIPININTYINREDMK 716
Score = 38 (18.4 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 11/28 (39%), Positives = 13/28 (46%)
Query: 233 IIDQHATDEKYNFETLQKTTLIKSQKLV 260
+ID T YNF QK I + K V
Sbjct: 1010 LIDNTETWFNYNFPRPQKVWKILASKYV 1037
>UNIPROTKB|E1BA65 [details] [associations]
symbol:PMS2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0032407 "MutSalpha complex binding" evidence=IEA]
[GO:0032389 "MutLalpha complex" evidence=IEA] [GO:0032138 "single
base insertion or deletion binding" evidence=IEA] [GO:0016447
"somatic recombination of immunoglobulin gene segments"
evidence=IEA] [GO:0016446 "somatic hypermutation of immunoglobulin
genes" evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 Pfam:PF01119 SMART:SM00387
Prosite:PS00058 GO:GO:0005524 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0016446
GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032138 GO:GO:0016447
GeneTree:ENSGT00530000063289 EMBL:DAAA02058333 IPI:IPI00699806
Ensembl:ENSBTAT00000037121 OMA:PSDSICE Uniprot:E1BA65
Length = 675
Score = 217 (81.4 bits), Expect = 7.2e-15, P = 7.2e-15
Identities = 52/128 (40%), Positives = 70/128 (54%)
Query: 2 KLVNEVYHQFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSY 61
+LVNEVYH +N HQYPF++LN+ + VD+NVTPDKRQI + EKLLLA +K +
Sbjct: 297 RLVNEVYHMYNRHQYPFVVLNVSVDSACVDINVTPDKRQILLQEEKLLLAVLKTSL---- 352
Query: 62 AIG-FTVDGNNMNQSMEQDPSSDVDMEKIQRSNSE----EVEHETIPVPSEDNSNFSHEA 116
IG F D N + S Q P DV+ I+R ++E E E + P P
Sbjct: 353 -IGMFESDVNKLQVS--QQPLLDVEGHLIKRPSAEMEKPEPEKKDDPAPLRTRGEEKRVV 409
Query: 117 NLQQSPET 124
+ + ET
Sbjct: 410 TISRLRET 417
>UNIPROTKB|Q8TTB5 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:188937 "Methanosarcina acetivorans C2A" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR020667
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:AE010299 GenomeReviews:AE010299_GR
eggNOG:COG0323 HSSP:P23367 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032300 KO:K03572 OMA:FLFINNR
RefSeq:NP_615486.1 ProteinModelPortal:Q8TTB5 GeneID:1472414
KEGG:mac:MA0522 ProtClustDB:CLSK449998
BioCyc:MACE188937:GI2O-589-MONOMER Uniprot:Q8TTB5
Length = 656
Score = 189 (71.6 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 89/385 (23%), Positives = 165/385 (42%)
Query: 4 VNEVYH-QFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEK-----LLLATVKVHI 57
V E Y+ + +YP +L + ++ + VDVNV P K ++ EK ++ A KV
Sbjct: 272 VREGYYTKIPKGRYPVAVLALTLNPEEVDVNVHPRKAEVRFSREKEVGDAVIRAVEKVLS 331
Query: 58 TDSYAIGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNS-NFSHEA 116
A Q +DP EKIQ + T+P + EA
Sbjct: 332 EHGLAPEVREKEGKRLQKTFEDPGLS---EKIQPQETPA----TLPEKAAGKEIGVREEA 384
Query: 117 NLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQ 176
+ ++ ++ + T + D RL+ S R + IQD LK V+
Sbjct: 385 KVSENSRLLKEKSEAYTYPIKDTERRLKKSERLLDSDGKAG--IQDGLKK------VEPA 436
Query: 177 DRCVENRFHANIDPSKNKEAESELNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQ 236
+ E + + I ++ K+++ +L + E ++I+GQ + +I+ + DL IIDQ
Sbjct: 437 SKKEEEKVNERIK-AEEKQSQ-KLKPKANTDLLEDLRIIGQVSKMYILAEKGEDLVIIDQ 494
Query: 237 HATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDD 296
HA E+ +E + +T + Q+L+ P + LT + ++++ +P + GF S D
Sbjct: 495 HAAHERVLYEQVLRTKKARVQELITPVMIELTPKERVLMEEYIPHLEEYGFGIS--EFGD 552
Query: 297 GNVLLTSLPMSKNTTLGR-ED---IEELLFMLQHTNSTEHCRPSRIRAMFASR-ACRKSV 351
++T +P GR ED I +++ L + + + I + ACR ++
Sbjct: 553 NTYVVTFVP----EVFGRLEDTGVIHDVISDLLAEGKVK--KDTGISEKVSKTLACRAAI 606
Query: 352 MIGRALSVGEMTGLVRNMGRIDQPW 376
G A + +M L+ + + P+
Sbjct: 607 KGGAACNTRQMEELIEQLKAAESPY 631
>TIGR_CMR|CHY_1396 [details] [associations]
symbol:CHY_1396 "DNA mismatch repair protein HexB"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0006298 "mismatch repair" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_00149 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
eggNOG:COG0323 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 KO:K03572 OMA:IRNGTPM HOGENOM:HOG000256552
RefSeq:YP_360228.1 ProteinModelPortal:Q3ACA6 STRING:Q3ACA6
GeneID:3727331 KEGG:chy:CHY_1396 PATRIC:21275923
BioCyc:CHYD246194:GJCN-1395-MONOMER Uniprot:Q3ACA6
Length = 578
Score = 160 (61.4 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 48/177 (27%), Positives = 81/177 (45%)
Query: 200 LNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQ-KTTLIKSQK 258
LN+ K + +++GQF+L +IIV+ + L IIDQHA E+ +E Q K SQ
Sbjct: 386 LNKDFAKEL--NFQVIGQFSLKYIIVEKNDKLLIIDQHAAHERILYEKYQTKLNPFYSQV 443
Query: 259 LVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIE 318
L P + + + L++N F + G + G L+ +P +E
Sbjct: 444 LTFPVRIKASPELEAFLQENYQNFLEIGLHI--EPFGPGEYLVREIPEDFPQNNIANVLE 501
Query: 319 ELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQP 375
E L+ + R ++ +FA C+ +V G L+ EMT LV+ + + + P
Sbjct: 502 EYLYEIMEQKEQVSFREKALK-LFA---CKNAVKFGEKLTYSEMTNLVKELFKTNYP 554
Score = 67 (28.6 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 31/117 (26%), Positives = 54/117 (46%)
Query: 17 PFIILNIEMSRDSVDVNVTPDKRQI-FMDHEKLLLATVKVHITDSYAIGFTVDGNNMNQS 75
P + L + + VDVNV P K ++ FMD +K+ L V+ I + + + + +
Sbjct: 282 PLVFLEVVVPGTWVDVNVHPQKLEVKFMDEQKIYL-DVRTIIRNKLVNAKSSSLKSFSPA 340
Query: 76 MEQDPSS-DVDMEKIQ------RSNSEEV-EHETIPVPSED-----NSNFSHEANLQ 119
E + S D D ++ NS+++ E E I S++ N +F+ E N Q
Sbjct: 341 RETNTKSEDNDYWQVTYFAEEFSGNSDKLLEKEDIFSTSDNLTFSLNKDFAKELNFQ 397
>UNIPROTKB|A9WJ86 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:324602 "Chloroflexus aurantiacus J-10-fl" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR020667
Pfam:PF01119 Pfam:PF02518 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:CP000909 GenomeReviews:CP000909_GR
eggNOG:COG0323 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032300 KO:K03572 HOGENOM:HOG000256552
OMA:ATMACHA RefSeq:YP_001634752.1 ProteinModelPortal:A9WJ86
STRING:A9WJ86 GeneID:5825934 KEGG:cau:Caur_1133 PATRIC:21413049
ProtClustDB:CLSK975399 BioCyc:CAUR324602:GIXU-1150-MONOMER
Uniprot:A9WJ86
Length = 624
Score = 143 (55.4 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 47/173 (27%), Positives = 82/173 (47%)
Query: 207 SMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL---IKSQKLVVPQ 263
S +++VGQ L +I+ + +++IDQHA E+ +E L ++SQ+L++PQ
Sbjct: 432 SALPPLRVVGQVGLTYIVAEAPEGMYLIDQHAAHERITYEKLMNQYAQHAVESQQLLIPQ 491
Query: 264 NLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFM 323
+ ++ +L N + GF + G VL+ ++P + T + I E+
Sbjct: 492 AVEVSPEASALLLGNAERLAEWGFVL--EPWGTG-VLVRAIPATLPTDELTQAIHEIAEK 548
Query: 324 LQHTNSTEHCRPSRIR-AMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQP 375
L ++ P R AM + AC SV G+ LS EM L+R + + P
Sbjct: 549 LAGRGGSD---PLEWREAMLITLACHTSVRAGQPLSHEEMRQLLRQLEQCVSP 598
Score = 62 (26.9 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 12/40 (30%), Positives = 22/40 (55%)
Query: 3 LVNEVYH-QFNNHQYPFIILNIEMSRDSVDVNVTPDKRQI 41
+V YH ++P IL++ + ++DVNV P K ++
Sbjct: 271 VVENAYHTMLMKGRFPIAILDVRVHPAAIDVNVHPTKSEV 310
>UNIPROTKB|Q74BP0 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR020667
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
eggNOG:COG0323 HSSP:P23367 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032300 HOGENOM:HOG000256550 KO:K03572
OMA:FLFINNR ProtClustDB:PRK00095 RefSeq:NP_953050.1
ProteinModelPortal:Q74BP0 GeneID:2688110 KEGG:gsu:GSU2001
PATRIC:22026863 BioCyc:GSUL243231:GH27-2035-MONOMER Uniprot:Q74BP0
Length = 606
Score = 126 (49.4 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 43/171 (25%), Positives = 76/171 (44%)
Query: 209 FEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL----IKSQKLVVPQN 264
F + ++GQ+N +I+ + SDL IIDQHA E+ FE L KT ++ Q L+ P+
Sbjct: 415 FSSLAVIGQYNASYILCQDGSDLVIIDQHAAHERVAFERL-KTQFAAGRVEGQGLLFPET 473
Query: 265 LHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNV--LLTSLPMSKNTTLGREDIEELLF 322
+ L+ +++++ + GF D D G ++ +P T + + L
Sbjct: 474 VELSHRESAVVREHGGELGRLGF----DLEDFGGTTWIVKGIPRLLAGTDYLRLLRDTLE 529
Query: 323 MLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRID 373
LQ ++ + + + AC V L+ GE+ L +M D
Sbjct: 530 ELQSLGASRSIADA-VEDILTRVACHSVVRGEHPLTTGEIEALFAHMDATD 579
Score = 80 (33.2 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 34/154 (22%), Positives = 66/154 (42%)
Query: 6 EVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIG 64
+ Y F +YP ++L IE+S VDVNV P K ++ + ++ ++ + ++ +
Sbjct: 270 QAYRNFLERGRYPVVVLFIEVSPGEVDVNVHPTKHEVRFRQQGIVHDVIQGAVEETLRLT 329
Query: 65 FTVDGNNMNQSMEQDPSS-DVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANL--QQS 121
+ ++S P + + +Q + + +VE + + + H Q +
Sbjct: 330 PWI---RRSESPVAAPLAVPRPQQYVQGTGARQVEEVRELLENYRPAVAPHRPLFAPQPA 386
Query: 122 PETV-EPDTPDETIEVIDDMP-RLQGSYRQSTPV 153
P+ EP PD ++DD R G Y S V
Sbjct: 387 PQPDREPPLPDSGSRMLDDTAVRRHGGYFSSLAV 420
>TIGR_CMR|GSU_2001 [details] [associations]
symbol:GSU_2001 "DNA mismatch repair protein MutL"
species:243231 "Geobacter sulfurreducens PCA" [GO:0006298 "mismatch
repair" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_00149 InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
eggNOG:COG0323 HSSP:P23367 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032300 HOGENOM:HOG000256550 KO:K03572
OMA:FLFINNR ProtClustDB:PRK00095 RefSeq:NP_953050.1
ProteinModelPortal:Q74BP0 GeneID:2688110 KEGG:gsu:GSU2001
PATRIC:22026863 BioCyc:GSUL243231:GH27-2035-MONOMER Uniprot:Q74BP0
Length = 606
Score = 126 (49.4 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 43/171 (25%), Positives = 76/171 (44%)
Query: 209 FEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTL----IKSQKLVVPQN 264
F + ++GQ+N +I+ + SDL IIDQHA E+ FE L KT ++ Q L+ P+
Sbjct: 415 FSSLAVIGQYNASYILCQDGSDLVIIDQHAAHERVAFERL-KTQFAAGRVEGQGLLFPET 473
Query: 265 LHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNV--LLTSLPMSKNTTLGREDIEELLF 322
+ L+ +++++ + GF D D G ++ +P T + + L
Sbjct: 474 VELSHRESAVVREHGGELGRLGF----DLEDFGGTTWIVKGIPRLLAGTDYLRLLRDTLE 529
Query: 323 MLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRID 373
LQ ++ + + + AC V L+ GE+ L +M D
Sbjct: 530 ELQSLGASRSIADA-VEDILTRVACHSVVRGEHPLTTGEIEALFAHMDATD 579
Score = 80 (33.2 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 34/154 (22%), Positives = 66/154 (42%)
Query: 6 EVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIG 64
+ Y F +YP ++L IE+S VDVNV P K ++ + ++ ++ + ++ +
Sbjct: 270 QAYRNFLERGRYPVVVLFIEVSPGEVDVNVHPTKHEVRFRQQGIVHDVIQGAVEETLRLT 329
Query: 65 FTVDGNNMNQSMEQDPSS-DVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANL--QQS 121
+ ++S P + + +Q + + +VE + + + H Q +
Sbjct: 330 PWI---RRSESPVAAPLAVPRPQQYVQGTGARQVEEVRELLENYRPAVAPHRPLFAPQPA 386
Query: 122 PETV-EPDTPDETIEVIDDMP-RLQGSYRQSTPV 153
P+ EP PD ++DD R G Y S V
Sbjct: 387 PQPDREPPLPDSGSRMLDDTAVRRHGGYFSSLAV 420
>DICTYBASE|DDB_G0283883 [details] [associations]
symbol:mlh3 "MutL DNA mismatch repair protein"
species:44689 "Dictyostelium discoideum" [GO:0030983 "mismatched
DNA binding" evidence=IEA] [GO:0006298 "mismatch repair"
evidence=IEA;IBA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0032407 "MutSalpha complex binding" evidence=IBA] [GO:0032390
"MutLbeta complex" evidence=IBA] [GO:0032300 "mismatch repair
complex" evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IBA]
[GO:0006200 "ATP catabolic process" evidence=IBA] [GO:0005712
"chiasma" evidence=IBA] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0000795 "synaptonemal complex" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 dictyBase:DDB_G0283883 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 EMBL:AAFI02000057 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407 GO:GO:0000795
eggNOG:COG0323 GO:GO:0005712 GO:GO:0032390 PANTHER:PTHR10073
KO:K08739 RefSeq:XP_638891.4 EnsemblProtists:DDB0232420
GeneID:8624288 KEGG:ddi:DDB_G0283883 InParanoid:Q54QI0 OMA:NECNIPF
Uniprot:Q54QI0
Length = 1658
Score = 165 (63.1 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 71/316 (22%), Positives = 140/316 (44%)
Query: 77 EQDPSSDVDMEK-IQRSNSEEV------EHETIPVPSE---DNSNFSHEANLQQSPETVE 126
E + +++ EK +++ N +EV EH+ P+ D+ S N+++ +
Sbjct: 1331 ELEKEKELEKEKELKKKNDDEVQQVQEKEHDDHCCPTHNIGDHLTLSGIGNIKEHQDDES 1390
Query: 127 PDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFHA 186
DE E I D Y + + + D++ + ++++ VE +
Sbjct: 1391 LGDDDEEKEFIHD-----SDYSK-IELAKKYNYTDDRISP-FFDKSIKPG---VEMK-DI 1439
Query: 187 NIDPSKN-KEAESE-LNRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYN 244
NI+ S KE S+ VI K M + K + Q++ F+I + D + I+DQHA E+
Sbjct: 1440 NINVSGFIKEVLSQKCTEVIPKEMLQNFKFITQWDNKFLICEADGIVLILDQHAVSERIK 1499
Query: 245 FETLQKTTL--IKSQKLVVPQNLH--LTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVL 300
E L++ K +P+ LT+ +++ + GF+++F+ + ++
Sbjct: 1500 LEILERKYFGENKFDLCPMPERTRWSLTEYELELMRIYTKPLEQWGFKWTFNKT---SIN 1556
Query: 301 LTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVG 360
++ +PM LG D+ E L+ L+ + RP + AS+ACR ++ G LS
Sbjct: 1557 ISQVPMFCLVGLGVNDLREFLYQLESSKGATSNRPPAAHRILASKACRTAIKFGNKLSRE 1616
Query: 361 EMTGLVRNMGRIDQPW 376
L+ ++ + P+
Sbjct: 1617 ICIKLLEDLNECNIPF 1632
Score = 45 (20.9 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 20/89 (22%), Positives = 37/89 (41%)
Query: 24 EMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYAIGFTVDGNNMNQSMEQDPSSD 83
E S D+ + T K I L T HIT++ T + NN N + + +++
Sbjct: 747 ERSEDTTTMTPT-SKLNISSQTPPTLPPTTIPHITNNS----TQNNNNNNNNNNNNNNNN 801
Query: 84 VDMEKIQRSNSEEVEHETIP-VPSEDNSN 111
+ +N+ + +P V E N++
Sbjct: 802 NNNNNNNNNNNNNENKDLVPFVKVEQNND 830
>TIGR_CMR|ECH_0884 [details] [associations]
symbol:ECH_0884 "DNA mismatch repair protein, MutL/HexB
family" species:205920 "Ehrlichia chaffeensis str. Arkansas"
[GO:0006298 "mismatch repair" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_00149 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
eggNOG:COG0323 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 HOGENOM:HOG000256550 KO:K03572 OMA:FLFINNR
ProtClustDB:PRK00095 RefSeq:YP_507679.1 ProteinModelPortal:Q2GFV4
STRING:Q2GFV4 GeneID:3927913 KEGG:ech:ECH_0884 PATRIC:20577170
BioCyc:ECHA205920:GJNR-887-MONOMER Uniprot:Q2GFV4
Length = 673
Score = 152 (58.6 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 85/389 (21%), Positives = 160/389 (41%)
Query: 4 VNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDSYA 62
V Y F +YP ++L +++ D VD NV P+K ++ +KL+ TV I + +
Sbjct: 269 VRYAYSDFIEKDKYPVVVLYLDIPCDQVDANVHPNKSEVRFQDKKLVYRTVVNAIKEVLS 328
Query: 63 IGFTVDGNNMNQSMEQDP---SSDVDMEKIQRSNSEEVE---HETIPVPSEDNSNFSHEA 116
I ++++ E D +S V+ I S S E P+ + D +S +
Sbjct: 329 INLNTKLKSISE-FENDHFVHASMVNSRNIGNSVSSEFFKCFQNRKPLLNNDVQKYSSK- 386
Query: 117 NLQQSPETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDII-QDQLKARYARRTVQA 175
N+ ET + D + D + ++ S + I + K + +
Sbjct: 387 NV----ETDDQSLLDTNVSFCTDSKMITNKLKEERVYENSREHINKGDSKIEVSNFDILG 442
Query: 176 QDRCVENRFHANID--PSKNKEAESELNRVIKKSMFEKMKI---VGQFNLGFIIVKYDSD 230
+ + N + + PS + + +V S+ + + + Q + +II +
Sbjct: 443 EKKNFVNLANNLLQESPSIDSGKFNTSKKVPSDSLIDTYPLGYALCQIHSRYIISQTQDS 502
Query: 231 LFIIDQHATDEKYNFETLQKTTL---IKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGF 287
+ IIDQHA E+ +E +++ IK Q L++P+ + + N L+ L V YK
Sbjct: 503 IVIIDQHAAHERLTYEYMKQVMAKEGIKRQILLIPEIIEMN--NHLDLE--LLVEYKEKL 558
Query: 288 -EFSFDSSDDGN--VLLTSLPMSKNTTLGREDIEELLF----MLQHTNSTEHCRPSRIRA 340
+ GN V++ +P G D++ L+ + T +I+
Sbjct: 559 LKLGLLIEPLGNLSVIVREVP----ALFGSFDVKSLIINIVDSIMEVGDTLFL-DDKIKD 613
Query: 341 MFASRACRKSVMIGRALSVGEMTGLVRNM 369
+ + AC S+ GR L + EM ++RNM
Sbjct: 614 ICGTIACYSSIRSGRKLKIEEMNAILRNM 642
>TIGR_CMR|NSE_0609 [details] [associations]
symbol:NSE_0609 "DNA mismatch repair protein, MutL/HexB
family" species:222891 "Neorickettsia sennetsu str. Miyayama"
[GO:0006298 "mismatch repair" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_00149 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG0323 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 HOGENOM:HOG000256550 KO:K03572 OMA:FLFINNR
RefSeq:YP_506489.1 ProteinModelPortal:Q2GDF7 STRING:Q2GDF7
GeneID:3931746 KEGG:nse:NSE_0609 PATRIC:22681251
ProtClustDB:CLSK2527761 BioCyc:NSEN222891:GHFU-625-MONOMER
Uniprot:Q2GDF7
Length = 652
Score = 143 (55.4 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 77/375 (20%), Positives = 160/375 (42%)
Query: 9 HQFNNH----QYPFIILNIEMSRDSVDVNVTPDKRQI-FMDHEKLLLATVKVHITDSYAI 63
H +N++ YP ++ I + + VDVN+ P+K ++ F D + + + V
Sbjct: 263 HAYNDYIPKNTYPIAVIFIRVHNNEVDVNIHPNKSEVKFRDPQVIRRFLLSVSSRSLLQC 322
Query: 64 GFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEAN--LQQS 121
G + ++++EQ ++ + + ET+ +E S +A + QS
Sbjct: 323 GRSTSTTVADRAVEQ-------FNQLLKKQTA-FRKETVSKTTESGFFQSPKAKKAIDQS 374
Query: 122 PETVEPDTPDETIEVIDDMPRLQGSYRQSTPVTL-SLDIIQDQLKAR-YARRTVQAQDRC 179
E + ++ D M G + ST + +L ++ + + Y+ + + +
Sbjct: 375 QEYAKQFEGKRNLD-FDQMQNNNGPFHFSTDQSEEALPLMSHKKTSEDYSNKLPLEKQQS 433
Query: 180 VENRFHANIDPSKNKEAESELNR---VIKKSMFEKM-KIVGQFNLGFIIVKYDSDLFIID 235
H N D S ++ ++N + + FE K Q + FII + ++++ IID
Sbjct: 434 PSIFLHDNRDTSFLQQQLRKINHCEHLQNEKHFETFGKFKCQVHGTFIITETENEMIIID 493
Query: 236 QHATDEKYNFETLQKTTLIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSD 295
QHA E+ +E ++K+ Q L+ + + L++ IL N+ + G +
Sbjct: 494 QHAAHERILYEQMKKSITSPGQNLLTAEFVPLSEKAVEILSFNVEKLKEIGLVV--ERVS 551
Query: 296 DGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRI-RAMFASRACRKSVMIG 354
V++ SLP + E IE++ +L+ E P + + A+ AC++++
Sbjct: 552 HCAVMVNSLPEAFKNVPTNELIEDIASLLE-----EEIEPKTLLERIHANIACKRAIKAN 606
Query: 355 RALSVGEMTGLVRNM 369
L+ E+ L+ M
Sbjct: 607 HNLTREEIEELLTLM 621
>UNIPROTKB|Q8F6X4 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:189518 "Leptospira interrogans serovar Lai str. 56601"
[GO:0003697 "single-stranded DNA binding" evidence=IBA] [GO:0006200
"ATP catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR020667
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 eggNOG:COG0323 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032300 EMBL:AE010300
GenomeReviews:AE010300_GR KO:K03572 HOGENOM:HOG000256552
OMA:FLFINNR RefSeq:NP_711356.2 ProteinModelPortal:Q8F6X4
PaxDb:Q8F6X4 GeneID:1150518 KEGG:lil:LA_1175 PATRIC:22383195
ProtClustDB:CLSK573800 BioCyc:LINT189518:GJBB-947-MONOMER
Uniprot:Q8F6X4
Length = 593
Score = 104 (41.7 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 43/182 (23%), Positives = 77/182 (42%)
Query: 198 SEL-NRVIKKSMFEKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTLIKS 256
SEL + +K S F K G FI+ + + +IIDQH E+ +E + + ++
Sbjct: 392 SELTDERVKHSSFVPKKHFGVLFETFILAEAEDGFYIIDQHTAHERIRYEEVLRKLEKRN 451
Query: 257 ---QKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLG 313
Q L+ P + ++K Q + + + + G F D + +++L +P G
Sbjct: 452 YGIQPLLTPIRIDVSKQEQEDILNRKKEYEEVGI-F-LDPLGEDSIVLREIPAYMEP--G 507
Query: 314 REDIEELLFMLQHTNSTEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRID 373
+E E +L L T E P M ACR ++ G LS + ++ + +
Sbjct: 508 QEK-EIVLDFLNRTEGKETSEPELYDLMAKCVACRSAIKKGDQLSDPILAEILNRLSYCE 566
Query: 374 QP 375
P
Sbjct: 567 NP 568
Score = 83 (34.3 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 24/70 (34%), Positives = 36/70 (51%)
Query: 3 LVNEVYHQF---NNHQYPFIILNIEMSRDSVDVNVTPDKRQI-FMDHEKL---LLATVKV 55
L+ + Y + N H Y F+ I+ SR VDVNV P KR+I F+D + LA ++
Sbjct: 267 LLKKAYDELLPPNGHPYCFLFFEIDPSR--VDVNVHPAKREIRFLDEDGFNGFFLALIQK 324
Query: 56 HITDSYAIGF 65
+ S + F
Sbjct: 325 ELRSSTPVSF 334
>TIGR_CMR|CBU_1083 [details] [associations]
symbol:CBU_1083 "DNA mismatch repair protein MutL"
species:227377 "Coxiella burnetii RSA 493" [GO:0006298 "mismatch
repair" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_00149 InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0006298
EMBL:AE016828 GenomeReviews:AE016828_GR Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 eggNOG:COG0323 HSSP:P23367
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
HOGENOM:HOG000256550 KO:K03572 OMA:FLFINNR ProtClustDB:PRK00095
RefSeq:NP_820082.2 ProteinModelPortal:Q83CM9 SMR:Q83CM9
GeneID:1208984 KEGG:cbu:CBU_1083 PATRIC:17930897
BioCyc:CBUR227377:GJ7S-1075-MONOMER Uniprot:Q83CM9
Length = 574
Score = 119 (46.9 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 41/156 (26%), Positives = 72/156 (46%)
Query: 222 FIIVKYDSDLFIIDQHATDEKYNFETLQKTTL---IKSQKLVVPQNLHLTKINQCILKDN 278
+I+ + + L I+D HA E+ +E ++K + Q L+VP NL L + N
Sbjct: 395 YILSQNEKGLVIVDMHAAHERILYEKMKKQLAEVGLAMQSLLVPINLSLNPQEITAWQTN 454
Query: 279 LPVFYKNGFEFSFDSSDDGNVLLTSLP-MSKNTTLGREDIEELLFMLQHTNSTEHCRPSR 337
+F + GFE +S +++ P + K L + L ++ H N+T R
Sbjct: 455 KALFARLGFEI--ESFGPDKIVVRRHPSLLKPKNLENLIRDVLADLITH-NTTSRVG-ER 510
Query: 338 IRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRID 373
I A A+ AC ++ L++ EM L+R M + +
Sbjct: 511 INAALATLACHAALRAPHYLTIEEMEALLREMEKTE 546
Score = 63 (27.2 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 4 VNEVYHQFNNH-QYPFIILNIEMSRDSVDVNVTPDKRQI-FMD 44
+ + YH H ++P +L +E+ VD+NV P K ++ F D
Sbjct: 270 LRQAYHDVLFHGRHPAYVLYLEIDPAFVDINVHPTKHEVRFRD 312
>UNIPROTKB|F1SN54 [details] [associations]
symbol:PMS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006298 "mismatch repair" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR009071 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 Prosite:PS00058 Pfam:PF00505
GO:GO:0005524 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 OMA:PFFHHLT
GeneTree:ENSGT00530000063289 EMBL:CU467085 EMBL:CU582834
Ensembl:ENSSSCT00000017470 Uniprot:F1SN54
Length = 922
Score = 125 (49.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 50/214 (23%), Positives = 93/214 (43%)
Query: 1 MKLVNEVYH----QFNNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVH 56
+KL+ Y+ + YP L I++ VDVN+TPDK Q+ + +++ +L ++
Sbjct: 273 LKLIRHYYNLKCLKETTRLYPIFFLKIDVPTVDVDVNLTPDKSQVLLQNKESVLIALENL 332
Query: 57 ITDSYAIGFTVDGNNMNQSMEQDPSS-DVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHE 115
+T Y ++ N +S + D SS D + K ++ +E P+ D S +
Sbjct: 333 MTTCYG---SLPSTNSYESDKTDVSSADTVVNKATETDVLFMETCGNNYPNVDTSAILFQ 389
Query: 116 ANLQQSPETVEPD-TPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQ 174
++ D D I V D S S S I + L + ++
Sbjct: 390 NDVHDDKSGNNTDFCVDPQIHVADHFGDHFNSENSSIDKNTSQGIPMNNLPLKNTQKEY- 448
Query: 175 AQDRCVENRFHANIDPSKNKEAESELNRVIKKSM 208
++ R V++ H N + +K+ E+E V++KS+
Sbjct: 449 SETRLVDSVEHPNKNANKDHIEENEEEAVLEKSL 482
Score = 57 (25.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 15/59 (25%), Positives = 29/59 (49%)
Query: 313 GREDIEELLFMLQHTNSTE--HCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
G D++E+L + + N+ E CRP ++ + A R S + LS ++ ++ M
Sbjct: 836 GVMDLKEILNAILNKNAKEVYECRPRKVMSYLEGEAVRLSRQLPMYLSKEDIQDIIYRM 894
>TIGR_CMR|BA_3904 [details] [associations]
symbol:BA_3904 "DNA mismatch repair protein MutL"
species:198094 "Bacillus anthracis str. Ames" [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS]
HAMAP:MF_00149 InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
eggNOG:COG0323 HSSP:P23367 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 KO:K03572 HOGENOM:HOG000256552
RefSeq:NP_846151.1 RefSeq:YP_020542.1 RefSeq:YP_029870.1
ProteinModelPortal:Q81WR4 IntAct:Q81WR4 DNASU:1085120
EnsemblBacteria:EBBACT00000009631 EnsemblBacteria:EBBACT00000015187
EnsemblBacteria:EBBACT00000021815 GeneID:1085120 GeneID:2814810
GeneID:2848877 KEGG:ban:BA_3904 KEGG:bar:GBAA_3904 KEGG:bat:BAS3617
OMA:FLFINNR ProtClustDB:PRK00095
BioCyc:BANT260799:GJAJ-3676-MONOMER
BioCyc:BANT261594:GJ7F-3793-MONOMER Uniprot:Q81WR4
Length = 626
Score = 89 (36.4 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 31/131 (23%), Positives = 56/131 (42%)
Query: 1 MKLVNEVYHQFNN-HQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITD 59
MK + + YH +YP L+IEM VDVNV P K ++ E+ LL ++ +
Sbjct: 264 MKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQA 323
Query: 60 SYA-IGFTVDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEANL 118
++ I D + E+D S + + + +E I +P+ + +
Sbjct: 324 AFKKIQLIPDAGVTTKKKEKDESVQEQFQ-FEHAKPKEPSMPEIVLPTGMDEKQEEPQAV 382
Query: 119 QQSPETVEPDT 129
+Q + +P T
Sbjct: 383 KQPTQLWQPST 393
Score = 87 (35.7 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 35/165 (21%), Positives = 72/165 (43%)
Query: 215 VGQFNLGFIIVKYDSDLFIIDQHATDEKYNFETLQ-KTTLIKS--QKLVVPQNLHLTKIN 271
+GQ + +I + D L++IDQHA E+ N+E + K + Q+L+VP + L+
Sbjct: 441 IGQMHGTYIFAQNDKGLYMIDQHAAQERINYEYFRDKVGRVAQEVQELLVPYRIDLSLTE 500
Query: 272 QCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTE 331
+++ L K G F + + ++ S P E I+E++ + +
Sbjct: 501 FLRVEEQLEELKKVGL-F-LEQFGHQSFIVRSHPTWFPKGQETEIIDEMMEQVVKLKKVD 558
Query: 332 HCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
+ A+ S C+ S+ + L+ ++ L+ + P+
Sbjct: 559 IKKLREEAAIMMS--CKASIKANQYLTNDQIFALLEELRTTTNPY 601
>CGD|CAL0003904 [details] [associations]
symbol:orf19.7257 species:5476 "Candida albicans" [GO:0032390
"MutLbeta complex" evidence=IEA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IEA] [GO:0006298 "mismatch repair"
evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR014790 Pfam:PF08676 SMART:SM00387 SMART:SM00853
CGD:CAL0003904 GO:GO:0005524 GO:GO:0006298 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 eggNOG:COG0323 EMBL:AACQ01000092
PANTHER:PTHR10073 KO:K08739 RefSeq:XP_715055.1
ProteinModelPortal:Q59ZT5 STRING:Q59ZT5 GeneID:3643294
KEGG:cal:CaO19.7257 Uniprot:Q59ZT5
Length = 636
Score = 103 (41.3 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 38/137 (27%), Positives = 64/137 (46%)
Query: 210 EKMKIVGQFNLGFIIVKYDSDLFIIDQHATDEKYNFET-LQKTTLIKSQKLVVPQNLHL- 267
EK +++ Q + FI++ D L ++DQHA+DE+ E LQ+ + L + +
Sbjct: 437 EKFRVINQVDRKFILLAADDQLVVLDQHASDERIRVEQYLQEFVSQPNPGLRLHSPIAFG 496
Query: 268 TKINQCILKDNLPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELL--FMLQ 325
++ +L D + N F + ++D V++T LP+ T + ED E L +LQ
Sbjct: 497 VHASELMLFDQYAANF-NSFGICY-TTDTAQVVITHLPLILLTKV--EDDAEFLKDSLLQ 552
Query: 326 HTNSTEHCRPSRIRAMF 342
H H RI F
Sbjct: 553 HCYDL-HDHVKRISPNF 568
Score = 72 (30.4 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 16/47 (34%), Positives = 24/47 (51%)
Query: 330 TEHCRPSRIRAMFASRACRKSVMIGRALSVGEMTGLVRNMGRIDQPW 376
T + P I + S+ACR ++M G L+ EM LV + R P+
Sbjct: 574 TSYHLPRIITELINSKACRSAIMFGDILTKDEMQDLVNKLSRCKLPF 620
>UNIPROTKB|Q48P04 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0006298
"mismatch repair" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] HAMAP:MF_00149 InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 EMBL:CP000058 GenomeReviews:CP000058_GR
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
eggNOG:COG0323 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 KO:K03572 ProtClustDB:PRK00095
HOGENOM:HOG000256551 OMA:ATMACHA RefSeq:YP_272865.1
ProteinModelPortal:Q48P04 SMR:Q48P04 STRING:Q48P04 GeneID:3560497
KEGG:psp:PSPPH_0563 PATRIC:19970177 Uniprot:Q48P04
Length = 648
Score = 114 (45.2 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 30/151 (19%), Positives = 71/151 (47%)
Query: 222 FIIVKYDSDLFIIDQHATDEKYNFETLQKTTL---IKSQKLVVPQNLHLTKINQCILKDN 278
+I+ + L ++D HA E+ +E L+ + Q L+VP++L +++ +++
Sbjct: 469 YILAENAHGLVLVDMHAAHERIMYERLKIAMANEGLSGQPLLVPESLAVSQREADCAEEH 528
Query: 279 LPVFYKNGFEFSFDSSDDGNVLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRI 338
+ F + GFE + + + +P + ++L L +++ + + +
Sbjct: 529 IATFQRLGFELQRLGPE--TLAIRQIPALLKQAEANRLVSDVLADLMEYGTSDRVQ-AHM 585
Query: 339 RAMFASRACRKSVMIGRALSVGEMTGLVRNM 369
+ + AC ++ R L++ EM GL+R+M
Sbjct: 586 NELLGTMACHGAIRANRRLAIPEMNGLLRDM 616
Score = 60 (26.2 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 4 VNEVYHQ--FNNHQYPFIILNIEMSRDSVDVNVTPDKRQI-FMD 44
V + Y FN ++P +L E+ +VDVNV P K ++ F D
Sbjct: 291 VRQAYRDVLFNG-RHPTFVLFFEVDPAAVDVNVHPTKHEVRFRD 333
>UNIPROTKB|E7EUC9 [details] [associations]
symbol:MLH1 "DNA mismatch repair protein Mlh1" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0000239
"pachytene" evidence=IEA] [GO:0000289 "nuclear-transcribed mRNA
poly(A) tail shortening" evidence=IEA] [GO:0000712 "resolution of
meiotic recombination intermediates" evidence=IEA] [GO:0000795
"synaptonemal complex" evidence=IEA] [GO:0001673 "male germ cell
nucleus" evidence=IEA] [GO:0005712 "chiasma" evidence=IEA]
[GO:0006298 "mismatch repair" evidence=IEA] [GO:0006303
"double-strand break repair via nonhomologous end joining"
evidence=IEA] [GO:0007060 "male meiosis chromosome segregation"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0008630 "intrinsic apoptotic signaling pathway in response to
DNA damage" evidence=IEA] [GO:0016446 "somatic hypermutation of
immunoglobulin genes" evidence=IEA] [GO:0032137 "guanine/thymine
mispair binding" evidence=IEA] [GO:0032389 "MutLalpha complex"
evidence=IEA] [GO:0043060 "meiotic metaphase I plate congression"
evidence=IEA] [GO:0045190 "isotype switching" evidence=IEA]
[GO:0045950 "negative regulation of mitotic recombination"
evidence=IEA] [GO:0048477 "oogenesis" evidence=IEA] [GO:0051257
"spindle midzone assembly involved in meiosis" evidence=IEA]
InterPro:IPR002099 InterPro:IPR011186 InterPro:IPR013507
Pfam:PF01119 GO:GO:0005524 GO:GO:0008630 GO:GO:0042493
GO:GO:0009636 GO:GO:0001666 GO:GO:0048477 GO:GO:0007283
GO:GO:0006298 GO:GO:0001673 GO:GO:0045190 GO:GO:0071407
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0006303 GO:GO:0045950 GO:GO:0000289
GO:GO:0000239 GO:GO:0000712 GO:GO:0000795 GO:GO:0016446
EMBL:AC006583 GO:GO:0005712 GO:GO:0032389 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 EMBL:AC011816 HGNC:HGNC:7127 ChiTaRS:Mlh1
GO:GO:0032137 GO:GO:0007060 GO:GO:0043060 GO:GO:0051257
IPI:IPI01008784 ProteinModelPortal:E7EUC9 SMR:E7EUC9
Ensembl:ENST00000441265 ArrayExpress:E7EUC9 Bgee:E7EUC9
Uniprot:E7EUC9
Length = 105
Score = 104 (41.7 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 2 KLVNEVYHQF-NNHQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITDS 60
K + VY + + +PF+ L++E+S +VDVNV P K ++ HE+ +L V+ HI +S
Sbjct: 33 KAIETVYAAYLPKNTHPFLYLSLEISPQNVDVNVHPTKHEVHFLHEESILERVQQHI-ES 91
Query: 61 YAIG 64
+G
Sbjct: 92 KLLG 95
>UNIPROTKB|P49850 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0003697 "single-stranded DNA binding" evidence=IBA] [GO:0006200
"ATP catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR020667
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 EMBL:AL009126 GenomeReviews:AL009126_GR
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 EMBL:U27343
eggNOG:COG0323 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032300 KO:K03572 HOGENOM:HOG000256552
OMA:FLFINNR ProtClustDB:PRK00095 PIR:A69663 RefSeq:NP_389587.1
PDB:3GAB PDB:3KDG PDB:3KDK PDBsum:3GAB PDBsum:3KDG PDBsum:3KDK
ProteinModelPortal:P49850 SMR:P49850 IntAct:P49850
EnsemblBacteria:EBBACT00000001153 GeneID:939455 KEGG:bsu:BSU17050
PATRIC:18975217 GenoList:BSU17050 BioCyc:BSUB:BSU17050-MONOMER
EvolutionaryTrace:P49850 Uniprot:P49850
Length = 627
Score = 98 (39.6 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 61/319 (19%), Positives = 134/319 (42%)
Query: 67 VDGNNMNQSMEQDPSSDVDMEKIQRSNSEEVEHETIPVPSEDNSNFSHEA-NLQQSPETV 125
VD N +E S + ++ + R ++V + +PS S A +Q T
Sbjct: 294 VDVNVHPSKLEVRLSKETELHDLIRDGIKDVFKQQQLIPSAQVPKKSAPAIKNEQQFITF 353
Query: 126 EPDTPDETIEVIDDMPRLQGSYRQSTPVTLSLDIIQDQLKARYARRTVQAQDRCVENRFH 185
+ P++ + P + S+ V +D + ++ + Q++ +E
Sbjct: 354 DEKPPEKKVPEKSTAPSYS-PMKLSSVVKEPVDAEEKLPPLQFDAPPIVDQEQTLEV--- 409
Query: 186 ANIDPSKNKEAESELNRVIKKSMFEKMKI---VGQFNLGFIIVKYDSDLFIIDQHATDEK 242
+++ + + E E + + +++ I +GQ + +I+ + ++ L+IIDQHA E+
Sbjct: 410 SDVSAEQPETFEQECHEEQPQPASDRVPIMYPIGQMHGTYILAQNENGLYIIDQHAAQER 469
Query: 243 YNFETL-QKTTLIKS--QKLVVPQNLHLTKINQCILKDNLPVFYKNG-FEFSFDSSDDGN 298
+E +K ++ Q+++VP H + I++ + G F SF S+ +
Sbjct: 470 IKYEYFREKVGEVEPEVQEMIVPLTFHYSTNEALIIEQHKQELESVGVFLESFGSN---S 526
Query: 299 VLLTSLPMSKNTTLGREDIEELLFMLQHTNSTEHCRPSRIRAMFA-SRACRKSVMIGRAL 357
++ P E IEE++ Q +++ ++R A +C+ S+ R L
Sbjct: 527 YIVRCHPAWFPKGEEAELIEEII---QQVLDSKNIDIKKLREEAAIMMSCKGSIKANRHL 583
Query: 358 SVGEMTGLVRNMGRIDQPW 376
E+ L+ ++ P+
Sbjct: 584 RNDEIKALLDDLRSTSDPF 602
Score = 66 (28.3 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 19/62 (30%), Positives = 30/62 (48%)
Query: 1 MKLVNEVYHQFNN-HQYPFIILNIEMSRDSVDVNVTPDKRQIFMDHEKLLLATVKVHITD 59
+K V+E YH ++P + I M VDVNV P K ++ + E L ++ I D
Sbjct: 264 VKAVHEGYHTLLPIGRHPITFIEITMDPILVDVNVHPSKLEVRLSKETELHDLIRDGIKD 323
Query: 60 SY 61
+
Sbjct: 324 VF 325
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.132 0.372 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 380 380 0.00090 117 3 11 22 0.41 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 47
No. of states in DFA: 604 (64 KB)
Total size of DFA: 232 KB (2127 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 40.27u 0.09s 40.36t Elapsed: 00:00:21
Total cpu time: 40.29u 0.09s 40.38t Elapsed: 00:00:21
Start: Thu Aug 15 12:59:28 2013 End: Thu Aug 15 12:59:49 2013