Your job contains 1 sequence.
>psy13676
MGHVSLTISQLINIIPITQSSPDASLLEEFRIPPDITAMFTLSGFISSAIHGHGRSTADR
QFYFVNSRPCEPSKVSGQAEGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTVIKSQKLV
VPQNLHLTKINQCILKDNLPVFYKNGFEFRITMMFANLRNGDGTSRKKKKKKKKKKKKKK
KKKKKKKKKKKRLYIFKKHT
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy13676
(200 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|F1NQJ2 - symbol:Gga.22468 "Uncharacterized prot... 254 3.7e-35 2
ZFIN|ZDB-GENE-030131-686 - symbol:pms2 "PMS2 postmeiotic ... 254 5.3e-35 2
UNIPROTKB|F1RFM9 - symbol:PMS2 "Uncharacterized protein" ... 244 5.0e-34 2
UNIPROTKB|F1PNW0 - symbol:PMS2 "Uncharacterized protein" ... 239 5.4e-34 2
UNIPROTKB|F1PNU2 - symbol:PMS2 "Uncharacterized protein" ... 239 6.0e-34 2
UNIPROTKB|C9J167 - symbol:PMS2 "Mismatch repair endonucle... 239 9.0e-34 2
UNIPROTKB|I3L0B5 - symbol:PMS2 "Mismatch repair endonucle... 239 1.2e-33 2
UNIPROTKB|P54278 - symbol:PMS2 "Mismatch repair endonucle... 239 1.4e-33 2
FB|FBgn0011660 - symbol:Pms2 "Pms2" species:7227 "Drosoph... 252 5.6e-32 2
UNIPROTKB|F1NQJ3 - symbol:Gga.22468 "Uncharacterized prot... 223 7.0e-32 2
SGD|S000005026 - symbol:PMS1 "ATP-binding protein involve... 238 9.0e-25 2
UNIPROTKB|Q755U7 - symbol:AER421W "AER421Wp" species:2848... 209 1.2e-21 2
UNIPROTKB|D3ZZF0 - symbol:Pms2 "Protein Pms2" species:101... 232 4.3e-20 2
MGI|MGI:104288 - symbol:Pms2 "postmeiotic segregation inc... 232 7.1e-20 2
UNIPROTKB|Q69L72 - symbol:OSJNBa0016G10.12 "Os02g0592300 ... 174 7.7e-19 2
RGD|1305483 - symbol:Pms2 "PMS2 postmeiotic segregation i... 232 1.3e-18 1
DICTYBASE|DDB_G0283981 - symbol:pms1 "MutL DNA mismatch r... 180 2.6e-18 2
TAIR|locus:2133274 - symbol:PMS1 "POSTMEIOTIC SEGREGATION... 166 3.3e-18 2
ASPGD|ASPL0000093218 - symbol:AN11853 species:162425 "Eme... 163 6.9e-18 2
ASPGD|ASPL0000095187 - symbol:AN11854 species:162425 "Eme... 163 6.9e-18 2
UNIPROTKB|Q5AZG4 - symbol:AN6316.2 "ATP-binding protein (... 163 6.9e-18 2
POMBASE|SPAC19G12.02c - symbol:pms1 "MutL family mismatch... 170 2.5e-14 2
WB|WBGene00004064 - symbol:pms-2 species:6239 "Caenorhabd... 194 3.3e-14 1
UNIPROTKB|G5EFG5 - symbol:pms-2 "Protein PMS-2, isoform a... 194 3.3e-14 1
UNIPROTKB|Q7SAM1 - symbol:NCU08020 "Putative uncharacteri... 188 1.7e-13 1
UNIPROTKB|E1BA65 - symbol:PMS2 "Uncharacterized protein" ... 171 7.4e-12 1
GENEDB_PFALCIPARUM|MAL7P1.145 - symbol:MAL7P1.145 "mismat... 131 9.4e-12 2
UNIPROTKB|Q8IBJ3 - symbol:MAL7P1.145 "Mismatch repair pro... 131 9.4e-12 2
UNIPROTKB|A8IT98 - symbol:CHLREDRAFT_101121 "Predicted pr... 157 1.7e-11 1
UNIPROTKB|Q22B61 - symbol:TTHERM_01109940 "DNA mismatch r... 155 6.1e-10 1
UNIPROTKB|Q7RPM0 - symbol:PY01438 "DNA mismatch repair pr... 140 3.1e-08 1
>UNIPROTKB|F1NQJ2 [details] [associations]
symbol:Gga.22468 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=IEA] [GO:0006298 "mismatch
repair" evidence=IEA] [GO:0016446 "somatic hypermutation of
immunoglobulin genes" evidence=IEA] [GO:0016447 "somatic
recombination of immunoglobulin gene segments" evidence=IEA]
[GO:0032138 "single base insertion or deletion binding"
evidence=IEA] [GO:0032389 "MutLalpha complex" evidence=IEA]
[GO:0032407 "MutSalpha complex binding" evidence=IEA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032138 OMA:LDKPWNC
GeneTree:ENSGT00530000063289 EMBL:AADN02023908 EMBL:AADN02023909
IPI:IPI00819916 Ensembl:ENSGALT00000005429 ArrayExpress:F1NQJ2
Uniprot:F1NQJ2
Length = 878
Score = 254 (94.5 bits), Expect = 3.7e-35, Sum P(2) = 3.7e-35
Identities = 49/79 (62%), Positives = 63/79 (79%)
Query: 74 KVSGQAE-GFIIVKYDSDLFIIDQHATDEKYNFETLQKTTVIKSQKLVVPQNLHLTKINQ 132
++ GQ GFII K +SDLFIIDQHATDEKYNFE LQ+ TV++ QKL+ PQNL+LT +N+
Sbjct: 693 EIIGQFNLGFIIAKLNSDLFIIDQHATDEKYNFEMLQQHTVLQGQKLIAPQNLNLTAVNE 752
Query: 133 CILKDNLPVFYKNGFEFRI 151
+L +NL +F KNGF+F I
Sbjct: 753 TVLIENLEIFRKNGFDFVI 771
Score = 165 (63.1 bits), Expect = 3.7e-35, Sum P(2) = 3.7e-35
Identities = 31/68 (45%), Positives = 48/68 (70%)
Query: 10 QLINIIPITQSSPDASLLEEFRIPP-DITA-MFTLSGFISSAIHGHGRSTADRQFYFVNS 67
QL ++IP Q P+ ++ EE+ + D+ +++++GFIS HG GRST DRQF+F+N
Sbjct: 250 QLQSLIPFVQLPPNEAVCEEYGLKSTDLPEKLYSITGFISRCDHGVGRSTTDRQFFFINQ 309
Query: 68 RPCEPSKV 75
RPC+P+KV
Sbjct: 310 RPCDPAKV 317
Score = 35 (17.4 bits), Expect = 4.0e-12, Sum P(2) = 4.0e-12
Identities = 6/14 (42%), Positives = 9/14 (64%)
Query: 127 LTKINQCILKDNLP 140
L ++N C + NLP
Sbjct: 570 LNRVNDCNNQTNLP 583
>ZFIN|ZDB-GENE-030131-686 [details] [associations]
symbol:pms2 "PMS2 postmeiotic segregation increased
2 (S. cerevisiae)" species:7955 "Danio rerio" [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058
ZFIN:ZDB-GENE-030131-686 GO:GO:0005524 GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
GeneTree:ENSGT00530000063289 EMBL:CR932017 IPI:IPI00901265
Ensembl:ENSDART00000111565 Bgee:E7F558 Uniprot:E7F558
Length = 851
Score = 254 (94.5 bits), Expect = 5.3e-35, Sum P(2) = 5.3e-35
Identities = 49/79 (62%), Positives = 62/79 (78%)
Query: 74 KVSGQAE-GFIIVKYDSDLFIIDQHATDEKYNFETLQKTTVIKSQKLVVPQNLHLTKINQ 132
++ GQ GFII K SDLFIIDQHATDEKYNFE LQ+ TV+K Q+L+VPQ+LHL I++
Sbjct: 666 EIIGQFNLGFIITKIKSDLFIIDQHATDEKYNFEMLQQNTVLKGQRLIVPQSLHLPAISE 725
Query: 133 CILKDNLPVFYKNGFEFRI 151
+L +NL +F KNGF+F I
Sbjct: 726 TVLMENLEIFRKNGFDFLI 744
Score = 163 (62.4 bits), Expect = 5.3e-35, Sum P(2) = 5.3e-35
Identities = 32/69 (46%), Positives = 46/69 (66%)
Query: 10 QLINIIPITQSSPDASLLEEFRIPP-DITA-MFTLSGFISSAIHGHGRSTADRQFYFVNS 67
QL ++IP Q SP+ S+ E++ + D+ +F + GF+S HG GRS DRQF+F+N
Sbjct: 232 QLQSLIPFRQISPNDSVKEDYGLGGVDVPKDLFNIDGFVSQGDHGVGRSATDRQFFFINK 291
Query: 68 RPCEPSKVS 76
RPC+P KVS
Sbjct: 292 RPCDPVKVS 300
Score = 42 (19.8 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 74 KVSGQAEGFI---IVKYDSDLFIIDQHATDEKYNFETLQKT 111
K +E F+ I K D I+D+ + +++ETL +T
Sbjct: 512 KQENHSESFLHHGINKTDVKAEIVDKPMDENLWSYETLPET 552
>UNIPROTKB|F1RFM9 [details] [associations]
symbol:PMS2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0032407 "MutSalpha complex binding" evidence=IEA]
[GO:0032389 "MutLalpha complex" evidence=IEA] [GO:0032138 "single
base insertion or deletion binding" evidence=IEA] [GO:0016447
"somatic recombination of immunoglobulin gene segments"
evidence=IEA] [GO:0016446 "somatic hypermutation of immunoglobulin
genes" evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0016446
GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032138 GO:GO:0016447 KO:K10858
OMA:LDKPWNC GeneTree:ENSGT00530000063289 CTD:5395 EMBL:FP102636
RefSeq:XP_003124331.1 Ensembl:ENSSSCT00000008330 GeneID:100514342
KEGG:ssc:100514342 Uniprot:F1RFM9
Length = 852
Score = 244 (91.0 bits), Expect = 5.0e-34, Sum P(2) = 5.0e-34
Identities = 45/79 (56%), Positives = 63/79 (79%)
Query: 74 KVSGQAE-GFIIVKYDSDLFIIDQHATDEKYNFETLQKTTVIKSQKLVVPQNLHLTKINQ 132
++ GQ GFII K ++D+FI+DQHATDEKYNFE LQ+ TV++ Q+L+VPQ L+LT +N+
Sbjct: 667 EIIGQFNLGFIITKLNADIFIVDQHATDEKYNFEMLQQHTVLQGQRLIVPQTLNLTAVNE 726
Query: 133 CILKDNLPVFYKNGFEFRI 151
+L +NL +F KNGF+F I
Sbjct: 727 AVLIENLDIFRKNGFDFVI 745
Score = 164 (62.8 bits), Expect = 5.0e-34, Sum P(2) = 5.0e-34
Identities = 34/69 (49%), Positives = 46/69 (66%)
Query: 10 QLINIIPITQSSPDASLLEEFRIP-PD-ITAMFTLSGFISSAIHGHGRSTADRQFYFVNS 67
QL ++I Q P S+ EEF + D + +F +SGFIS HG GRS+ DRQF+F+N
Sbjct: 235 QLQSLISFVQLPPSDSVCEEFGLSCSDALHNLFCISGFISRCTHGVGRSSTDRQFFFINR 294
Query: 68 RPCEPSKVS 76
RPC+P+KVS
Sbjct: 295 RPCDPAKVS 303
Score = 34 (17.0 bits), Expect = 5.9e-12, Sum P(2) = 5.9e-12
Identities = 14/62 (22%), Positives = 26/62 (41%)
Query: 72 PSKVSGQAEGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTVIKSQKLVVPQNL-HLTKI 130
P K +GQ + + + + F + Q ++ +T V QK P L T+I
Sbjct: 405 PLKAAGQEKRAVTISRLREAFSLRQAPENKPRGAKTADSRRVSPRQKGGAPGPLCSRTRI 464
Query: 131 NQ 132
++
Sbjct: 465 SE 466
>UNIPROTKB|F1PNW0 [details] [associations]
symbol:PMS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585 KO:K10858
GeneTree:ENSGT00530000063289 CTD:5395 EMBL:AAEX03004285
RefSeq:XP_536879.3 Ensembl:ENSCAFT00000024713 GeneID:479751
KEGG:cfa:479751 Uniprot:F1PNW0
Length = 866
Score = 239 (89.2 bits), Expect = 5.4e-34, Sum P(2) = 5.4e-34
Identities = 45/79 (56%), Positives = 61/79 (77%)
Query: 74 KVSGQAE-GFIIVKYDSDLFIIDQHATDEKYNFETLQKTTVIKSQKLVVPQNLHLTKINQ 132
++ GQ GFII K +D+FI+DQHATDEKYNFE LQ+ TV++ Q+L+ PQ L+LT +N+
Sbjct: 681 EIIGQFNLGFIITKLKADIFIVDQHATDEKYNFEMLQQHTVLQGQRLIAPQTLNLTAVNE 740
Query: 133 CILKDNLPVFYKNGFEFRI 151
IL +NL +F KNGF+F I
Sbjct: 741 AILIENLEIFRKNGFDFVI 759
Score = 169 (64.5 bits), Expect = 5.4e-34, Sum P(2) = 5.4e-34
Identities = 34/69 (49%), Positives = 47/69 (68%)
Query: 10 QLINIIPITQSSPDASLLEEFRIP-PDIT-AMFTLSGFISSAIHGHGRSTADRQFYFVNS 67
QL ++IP Q P S+ EE+ + D+ + F +SGFIS HG GRS+ DRQF+F+N
Sbjct: 235 QLQSLIPFVQLPPSDSVCEEYGLNRADVLHSRFHISGFISHCAHGVGRSSTDRQFFFINR 294
Query: 68 RPCEPSKVS 76
RPC+P+KVS
Sbjct: 295 RPCDPAKVS 303
>UNIPROTKB|F1PNU2 [details] [associations]
symbol:PMS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585 OMA:TINECED
GeneTree:ENSGT00530000063289 EMBL:AAEX03004285
Ensembl:ENSCAFT00000024721 Uniprot:F1PNU2
Length = 897
Score = 239 (89.2 bits), Expect = 6.0e-34, Sum P(2) = 6.0e-34
Identities = 45/79 (56%), Positives = 61/79 (77%)
Query: 74 KVSGQAE-GFIIVKYDSDLFIIDQHATDEKYNFETLQKTTVIKSQKLVVPQNLHLTKINQ 132
++ GQ GFII K +D+FI+DQHATDEKYNFE LQ+ TV++ Q+L+ PQ L+LT +N+
Sbjct: 712 EIIGQFNLGFIITKLKADIFIVDQHATDEKYNFEMLQQHTVLQGQRLIAPQTLNLTAVNE 771
Query: 133 CILKDNLPVFYKNGFEFRI 151
IL +NL +F KNGF+F I
Sbjct: 772 AILIENLEIFRKNGFDFVI 790
Score = 169 (64.5 bits), Expect = 6.0e-34, Sum P(2) = 6.0e-34
Identities = 34/69 (49%), Positives = 47/69 (68%)
Query: 10 QLINIIPITQSSPDASLLEEFRIP-PDIT-AMFTLSGFISSAIHGHGRSTADRQFYFVNS 67
QL ++IP Q P S+ EE+ + D+ + F +SGFIS HG GRS+ DRQF+F+N
Sbjct: 266 QLQSLIPFVQLPPSDSVCEEYGLNRADVLHSRFHISGFISHCAHGVGRSSTDRQFFFINR 325
Query: 68 RPCEPSKVS 76
RPC+P+KVS
Sbjct: 326 RPCDPAKVS 334
>UNIPROTKB|C9J167 [details] [associations]
symbol:PMS2 "Mismatch repair endonuclease PMS2"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006298 "mismatch repair" evidence=IEA] [GO:0030983 "mismatched
DNA binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676
SMART:SM00853 GO:GO:0005524 GO:GO:0006298 Gene3D:3.30.565.10
SUPFAM:SSF55874 EMBL:AC005995 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
PANTHER:PTHR10073 HOGENOM:HOG000165474 HGNC:HGNC:9122
IPI:IPI00604708 ProteinModelPortal:C9J167 SMR:C9J167 STRING:C9J167
Ensembl:ENST00000441476 UCSC:uc003spj.3 ArrayExpress:C9J167
Bgee:C9J167 Uniprot:C9J167
Length = 756
Score = 239 (89.2 bits), Expect = 9.0e-34, Sum P(2) = 9.0e-34
Identities = 44/79 (55%), Positives = 61/79 (77%)
Query: 74 KVSGQAE-GFIIVKYDSDLFIIDQHATDEKYNFETLQKTTVIKSQKLVVPQNLHLTKINQ 132
++ GQ GFII K + D+FI+DQHATDEKYNFE LQ+ TV++ Q+L+ PQ L+LT +N+
Sbjct: 571 EIIGQFNLGFIITKLNEDIFIVDQHATDEKYNFEMLQQHTVLQGQRLIAPQTLNLTAVNE 630
Query: 133 CILKDNLPVFYKNGFEFRI 151
+L +NL +F KNGF+F I
Sbjct: 631 AVLIENLEIFRKNGFDFVI 649
Score = 165 (63.1 bits), Expect = 9.0e-34, Sum P(2) = 9.0e-34
Identities = 33/68 (48%), Positives = 46/68 (67%)
Query: 10 QLINIIPITQSSPDASLLEEFRIP-PD-ITAMFTLSGFISSAIHGHGRSTADRQFYFVNS 67
QL ++IP Q P S+ EE+ + D + +F +SGFIS HG GRS+ DRQF+F+N
Sbjct: 129 QLQSLIPFVQLPPSDSVCEEYGLSCSDALHNLFYISGFISQCTHGVGRSSTDRQFFFINR 188
Query: 68 RPCEPSKV 75
RPC+P+KV
Sbjct: 189 RPCDPAKV 196
Score = 34 (17.0 bits), Expect = 4.5e-20, Sum P(2) = 4.5e-20
Identities = 12/71 (16%), Positives = 31/71 (43%)
Query: 10 QLINIIPITQSSPDASLLEEFRIPPDITAMFTLSGFISSAIHGHGRSTADRQFYFVNSRP 69
+L+N ++ S D ++ ++ P +M +L+ I H +S ++ + ++
Sbjct: 487 KLVNTQDMSASQVDVAVKINKKVVPLDFSMSSLAKRIKQLHHEAQQSEGEQNYRKFRAKI 546
Query: 70 CEPSKVSGQAE 80
C + + E
Sbjct: 547 CPGENQAAEDE 557
>UNIPROTKB|I3L0B5 [details] [associations]
symbol:PMS2 "Mismatch repair endonuclease PMS2"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006298 "mismatch repair" evidence=IEA] [GO:0030983 "mismatched
DNA binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
Pfam:PF01119 Pfam:PF08676 SMART:SM00853 Prosite:PS00058
GO:GO:0005524 GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874
EMBL:AC005995 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 HGNC:HGNC:9122
ProteinModelPortal:I3L0B5 SMR:I3L0B5 Ensembl:ENST00000382322
Bgee:I3L0B5 Uniprot:I3L0B5
Length = 815
Score = 239 (89.2 bits), Expect = 1.2e-33, Sum P(2) = 1.2e-33
Identities = 44/79 (55%), Positives = 61/79 (77%)
Query: 74 KVSGQAE-GFIIVKYDSDLFIIDQHATDEKYNFETLQKTTVIKSQKLVVPQNLHLTKINQ 132
++ GQ GFII K + D+FI+DQHATDEKYNFE LQ+ TV++ Q+L+ PQ L+LT +N+
Sbjct: 630 EIIGQFNLGFIITKLNEDIFIVDQHATDEKYNFEMLQQHTVLQGQRLIAPQTLNLTAVNE 689
Query: 133 CILKDNLPVFYKNGFEFRI 151
+L +NL +F KNGF+F I
Sbjct: 690 AVLIENLEIFRKNGFDFVI 708
Score = 165 (63.1 bits), Expect = 1.2e-33, Sum P(2) = 1.2e-33
Identities = 33/68 (48%), Positives = 46/68 (67%)
Query: 10 QLINIIPITQSSPDASLLEEFRIP-PD-ITAMFTLSGFISSAIHGHGRSTADRQFYFVNS 67
QL ++IP Q P S+ EE+ + D + +F +SGFIS HG GRS+ DRQF+F+N
Sbjct: 188 QLQSLIPFVQLPPSDSVCEEYGLSCSDALHNLFYISGFISQCTHGVGRSSTDRQFFFINR 247
Query: 68 RPCEPSKV 75
RPC+P+KV
Sbjct: 248 RPCDPAKV 255
Score = 34 (17.0 bits), Expect = 5.8e-20, Sum P(2) = 5.8e-20
Identities = 12/71 (16%), Positives = 31/71 (43%)
Query: 10 QLINIIPITQSSPDASLLEEFRIPPDITAMFTLSGFISSAIHGHGRSTADRQFYFVNSRP 69
+L+N ++ S D ++ ++ P +M +L+ I H +S ++ + ++
Sbjct: 546 KLVNTQDMSASQVDVAVKINKKVVPLDFSMSSLAKRIKQLHHEAQQSEGEQNYRKFRAKI 605
Query: 70 CEPSKVSGQAE 80
C + + E
Sbjct: 606 CPGENQAAEDE 616
>UNIPROTKB|P54278 [details] [associations]
symbol:PMS2 "Mismatch repair endonuclease PMS2"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004519 "endonuclease activity" evidence=IEA] [GO:0016447
"somatic recombination of immunoglobulin gene segments"
evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IBA]
[GO:0016446 "somatic hypermutation of immunoglobulin genes"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0032407 "MutSalpha complex binding" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IC] [GO:0006298 "mismatch repair" evidence=IDA]
[GO:0032138 "single base insertion or deletion binding"
evidence=IDA] [GO:0003697 "single-stranded DNA binding"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
GO:GO:0042493 GO:GO:0016887 GO:GO:0006298 GO:GO:0090305
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0004519 EMBL:AC005995
MIM:276300 Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 Orphanet:144 GO:GO:0016446
GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032138 GO:GO:0016447 KO:K10858
HOGENOM:HOG000165474 OMA:LDKPWNC HPA:CAB010235 EMBL:U13696
EMBL:AB103082 EMBL:AB103083 EMBL:AB103085 EMBL:U14658 EMBL:AK312390
EMBL:BC093921 IPI:IPI00418329 IPI:IPI00746337 IPI:IPI00873034
IPI:IPI00874088 PIR:S47598 RefSeq:NP_000526.1 UniGene:Hs.632637
PDB:1EA6 PDB:1H7S PDB:1H7U PDBsum:1EA6 PDBsum:1H7S PDBsum:1H7U
ProteinModelPortal:P54278 SMR:P54278 DIP:DIP-27602N IntAct:P54278
MINT:MINT-2804140 STRING:P54278 PhosphoSite:P54278 DMDM:1709685
SWISS-2DPAGE:P54278 PRIDE:P54278 Ensembl:ENST00000265849
Ensembl:ENST00000382321 Ensembl:ENST00000406569 GeneID:5395
KEGG:hsa:5395 UCSC:uc003spk.3 UCSC:uc010kte.3 UCSC:uc010ktf.2
CTD:5395 GeneCards:GC07M005979 HGNC:HGNC:9122 MIM:600259 MIM:614337
neXtProt:NX_P54278 PharmGKB:PA33448 HOVERGEN:HBG008219
InParanoid:P54278 PhylomeDB:P54278 EvolutionaryTrace:P54278
GenomeRNAi:5395 NextBio:20918 ArrayExpress:P54278 Bgee:P54278
CleanEx:HS_PMS2 Genevestigator:P54278 GermOnline:ENSG00000122512
Uniprot:P54278
Length = 862
Score = 239 (89.2 bits), Expect = 1.4e-33, Sum P(2) = 1.4e-33
Identities = 44/79 (55%), Positives = 61/79 (77%)
Query: 74 KVSGQAE-GFIIVKYDSDLFIIDQHATDEKYNFETLQKTTVIKSQKLVVPQNLHLTKINQ 132
++ GQ GFII K + D+FI+DQHATDEKYNFE LQ+ TV++ Q+L+ PQ L+LT +N+
Sbjct: 677 EIIGQFNLGFIITKLNEDIFIVDQHATDEKYNFEMLQQHTVLQGQRLIAPQTLNLTAVNE 736
Query: 133 CILKDNLPVFYKNGFEFRI 151
+L +NL +F KNGF+F I
Sbjct: 737 AVLIENLEIFRKNGFDFVI 755
Score = 165 (63.1 bits), Expect = 1.4e-33, Sum P(2) = 1.4e-33
Identities = 33/68 (48%), Positives = 46/68 (67%)
Query: 10 QLINIIPITQSSPDASLLEEFRIP-PD-ITAMFTLSGFISSAIHGHGRSTADRQFYFVNS 67
QL ++IP Q P S+ EE+ + D + +F +SGFIS HG GRS+ DRQF+F+N
Sbjct: 235 QLQSLIPFVQLPPSDSVCEEYGLSCSDALHNLFYISGFISQCTHGVGRSSTDRQFFFINR 294
Query: 68 RPCEPSKV 75
RPC+P+KV
Sbjct: 295 RPCDPAKV 302
Score = 34 (17.0 bits), Expect = 7.0e-20, Sum P(2) = 7.0e-20
Identities = 12/71 (16%), Positives = 31/71 (43%)
Query: 10 QLINIIPITQSSPDASLLEEFRIPPDITAMFTLSGFISSAIHGHGRSTADRQFYFVNSRP 69
+L+N ++ S D ++ ++ P +M +L+ I H +S ++ + ++
Sbjct: 593 KLVNTQDMSASQVDVAVKINKKVVPLDFSMSSLAKRIKQLHHEAQQSEGEQNYRKFRAKI 652
Query: 70 CEPSKVSGQAE 80
C + + E
Sbjct: 653 CPGENQAAEDE 663
>FB|FBgn0011660 [details] [associations]
symbol:Pms2 "Pms2" species:7227 "Drosophila melanogaster"
[GO:0006298 "mismatch repair" evidence=ISS;IBA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0032389 "MutLalpha complex" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0016887 "ATPase
activity" evidence=IBA] [GO:0032407 "MutSalpha complex binding"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 EMBL:AE013599 GO:GO:0005524
GO:GO:0005875 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 eggNOG:COG0323 GO:GO:0032389 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9
KO:K10858 GeneTree:ENSGT00530000063289 CTD:5395 RefSeq:NP_477023.1
UniGene:Dm.4816 ProteinModelPortal:A1ZA03 SMR:A1ZA03 STRING:A1ZA03
PaxDb:A1ZA03 PRIDE:A1ZA03 EnsemblMetazoa:FBtr0087388 GeneID:36705
KEGG:dme:Dmel_CG8169 UCSC:CG8169-RA FlyBase:FBgn0011660
InParanoid:A1ZA03 OMA:GQGKRST OrthoDB:EOG4FJ6QW PhylomeDB:A1ZA03
GenomeRNAi:36705 NextBio:799969 Bgee:A1ZA03 Uniprot:A1ZA03
Length = 899
Score = 252 (93.8 bits), Expect = 5.6e-32, Sum P(2) = 5.6e-32
Identities = 47/79 (59%), Positives = 63/79 (79%)
Query: 74 KVSGQAE-GFIIVKYDSDLFIIDQHATDEKYNFETLQKTTVIKSQKLVVPQNLHLTKINQ 132
++ GQ GFIIVK + DLFI+DQHATDEKYNFETLQ+TT ++ Q+L VPQNL LT +N+
Sbjct: 702 EIIGQFNLGFIIVKLEDDLFIVDQHATDEKYNFETLQRTTQLEYQRLAVPQNLELTAVNE 761
Query: 133 CILKDNLPVFYKNGFEFRI 151
+L +++ VF KNGF+F +
Sbjct: 762 MVLLNHIDVFEKNGFKFEV 780
Score = 137 (53.3 bits), Expect = 5.6e-32, Sum P(2) = 5.6e-32
Identities = 25/39 (64%), Positives = 30/39 (76%)
Query: 38 AMFTLSGFISSAIHGHGRSTADRQFYFVNSRPCEPSKVS 76
A F L GFISS HG GRS+ DRQF+FVNSRPC+P ++
Sbjct: 297 ADFQLEGFISSCRHGAGRSSRDRQFFFVNSRPCDPKNIA 335
>UNIPROTKB|F1NQJ3 [details] [associations]
symbol:Gga.22468 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006298
"mismatch repair" evidence=IEA] [GO:0030983 "mismatched DNA
binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0006298 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 GeneTree:ENSGT00530000063289
EMBL:AADN02023908 EMBL:AADN02023909 IPI:IPI00604396
Ensembl:ENSGALT00000005427 ArrayExpress:F1NQJ3 Uniprot:F1NQJ3
Length = 858
Score = 223 (83.6 bits), Expect = 7.0e-32, Sum P(2) = 7.0e-32
Identities = 41/62 (66%), Positives = 52/62 (83%)
Query: 90 DLFIIDQHATDEKYNFETLQKTTVIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEF 149
DLFIIDQHATDEKYNFE LQ+ TV++ QKL+ PQNL+LT +N+ +L +NL +F KNGF+F
Sbjct: 692 DLFIIDQHATDEKYNFEMLQQHTVLQGQKLIAPQNLNLTAVNETVLIENLEIFRKNGFDF 751
Query: 150 RI 151
I
Sbjct: 752 VI 753
Score = 165 (63.1 bits), Expect = 7.0e-32, Sum P(2) = 7.0e-32
Identities = 31/68 (45%), Positives = 48/68 (70%)
Query: 10 QLINIIPITQSSPDASLLEEFRIPP-DITA-MFTLSGFISSAIHGHGRSTADRQFYFVNS 67
QL ++IP Q P+ ++ EE+ + D+ +++++GFIS HG GRST DRQF+F+N
Sbjct: 227 QLQSLIPFVQLPPNEAVCEEYGLKSTDLPEKLYSITGFISRCDHGVGRSTTDRQFFFINQ 286
Query: 68 RPCEPSKV 75
RPC+P+KV
Sbjct: 287 RPCDPAKV 294
Score = 35 (17.4 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 6/14 (42%), Positives = 9/14 (64%)
Query: 127 LTKINQCILKDNLP 140
L ++N C + NLP
Sbjct: 554 LNRVNDCNNQTNLP 567
>SGD|S000005026 [details] [associations]
symbol:PMS1 "ATP-binding protein involved in mismatch repair"
species:4932 "Saccharomyces cerevisiae" [GO:0016887 "ATPase
activity" evidence=IMP;IDA] [GO:0032389 "MutLalpha complex"
evidence=IEA;IPI] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0000710 "meiotic mismatch repair" evidence=IMP] [GO:0006281
"DNA repair" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0032135 "DNA insertion or deletion
binding" evidence=IDA] [GO:0032139 "dinucleotide insertion or
deletion binding" evidence=IDA] [GO:0003697 "single-stranded DNA
binding" evidence=IDA] [GO:0003690 "double-stranded DNA binding"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA;IMP]
[GO:0006298 "mismatch repair" evidence=IEA;IMP] [GO:0000404 "loop
DNA binding" evidence=IDA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IBA] [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR015434
Pfam:PF01119 Pfam:PF02518 Pfam:PF08676 SMART:SM00387 SMART:SM00853
SGD:S000005026 Prosite:PS00058 GO:GO:0005524 GO:GO:0005737
EMBL:BK006947 GO:GO:0016887 Gene3D:3.30.565.10 SUPFAM:SSF55874
EMBL:DQ115393 GO:GO:0030983 EMBL:X86470 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
EMBL:X89016 eggNOG:COG0323 EMBL:AF458969 EMBL:AF458971
EMBL:AF458973 EMBL:AF458974 EMBL:AF458976 EMBL:AF458977 KO:K14561
RefSeq:NP_014324.3 GeneID:855649 KEGG:sce:YNL075W GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
GO:GO:0000710 PANTHER:PTHR10073:SF9 KO:K10858 OMA:LDKPWNC
OrthoDB:EOG4FFH9B EMBL:M29688 EMBL:DQ356628 EMBL:DQ356629
EMBL:DQ356630 EMBL:DQ356631 EMBL:DQ356632 EMBL:Z71357 EMBL:Z71358
PIR:S53896 RefSeq:NP_014317.4 PDB:3H4L PDBsum:3H4L
ProteinModelPortal:P14242 SMR:P14242 DIP:DIP-2416N IntAct:P14242
MINT:MINT-625253 STRING:P14242 PaxDb:P14242 PeptideAtlas:P14242
EnsemblFungi:YNL082W GeneID:855642 KEGG:sce:YNL082W CYGD:YNL082w
GeneTree:ENSGT00530000063289 EvolutionaryTrace:P14242
NextBio:979872 Genevestigator:P14242 GermOnline:YNL082W
Uniprot:P14242
Length = 873
Score = 238 (88.8 bits), Expect = 9.0e-25, Sum P(2) = 9.0e-25
Identities = 51/92 (55%), Positives = 67/92 (72%)
Query: 65 VNSRPCEPSKVSGQAE-GFIIV--KYDS--DLFIIDQHATDEKYNFETLQKTTVIKSQKL 119
V+ + +V GQ GFIIV K D+ DLFI+DQHA+DEKYNFETLQ TV KSQKL
Sbjct: 666 VSKNDFKKMEVVGQFNLGFIIVTRKVDNKYDLFIVDQHASDEKYNFETLQAVTVFKSQKL 725
Query: 120 VVPQNLHLTKINQCILKDNLPVFYKNGFEFRI 151
++PQ + L+ I++ ++ DNLPVF KNGF+ +I
Sbjct: 726 IIPQPVELSVIDELVVLDNLPVFEKNGFKLKI 757
Score = 82 (33.9 bits), Expect = 9.0e-25, Sum P(2) = 9.0e-25
Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 35 DITAMFTLSGFISSAIHGHGRSTADRQFYFVNSRPCEPS 73
D+ + G+IS G GR++ DRQF +VN RP E S
Sbjct: 255 DLDYKIRVKGYISQNSFGCGRNSKDRQFIYVNKRPVEYS 293
>UNIPROTKB|Q755U7 [details] [associations]
symbol:AER421W "AER421Wp" species:284811 "Ashbya gossypii
ATCC 10895" [GO:0003697 "single-stranded DNA binding" evidence=IBA]
[GO:0006200 "ATP catabolic process" evidence=IBA] [GO:0006298
"mismatch repair" evidence=IBA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IBA] [GO:0016887 "ATPase activity"
evidence=IBA] [GO:0032300 "mismatch repair complex" evidence=IBA]
[GO:0032389 "MutLalpha complex" evidence=IBA] [GO:0032407
"MutSalpha complex binding" evidence=IBA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 EMBL:AE016818
GenomeReviews:AE016818_GR GO:GO:0032407 GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
PANTHER:PTHR10073:SF9 KO:K10858 HOGENOM:HOG000165474 OMA:LDKPWNC
OrthoDB:EOG4FFH9B RefSeq:NP_985276.1 ProteinModelPortal:Q755U7
STRING:Q755U7 EnsemblFungi:AAS53100 GeneID:4621495
KEGG:ago:AGOS_AER421W PhylomeDB:Q755U7 Uniprot:Q755U7
Length = 903
Score = 209 (78.6 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 44/92 (47%), Positives = 62/92 (67%)
Query: 65 VNSRPCEPSKVSGQAE-GFIIV----KYDSDLFIIDQHATDEKYNFETLQKTTVIKSQKL 119
V+ R + + GQ GFIIV + DLFI+DQHA+DEKYNFE LQK+TV SQ L
Sbjct: 696 VSKRDFKEMSIIGQFNLGFIIVARRAENKHDLFIVDQHASDEKYNFENLQKSTVFNSQHL 755
Query: 120 VVPQNLHLTKINQCILKDNLPVFYKNGFEFRI 151
+ P + L+ I++ ++ +NLP+F KNGF+ R+
Sbjct: 756 IKPLTVELSVIDELLVLENLPLFKKNGFKIRV 787
Score = 82 (33.9 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 35 DITAMFTLSGFISSAIHGHGRSTADRQFYFVNSRPCEPSKV 75
D ++G+IS A G GRS DRQF ++N RP + +V
Sbjct: 256 DADHRIAVTGYISRASFGCGRSGKDRQFIYINKRPVDYPQV 296
>UNIPROTKB|D3ZZF0 [details] [associations]
symbol:Pms2 "Protein Pms2" species:10116 "Rattus
norvegicus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006298
"mismatch repair" evidence=IEA] [GO:0030983 "mismatched DNA
binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 RGD:1305483 GO:GO:0005524 GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
IPI:IPI00949446 ProteinModelPortal:D3ZZF0
Ensembl:ENSRNOT00000068106 ArrayExpress:D3ZZF0 Uniprot:D3ZZF0
Length = 850
Score = 232 (86.7 bits), Expect = 4.3e-20, Sum P(2) = 4.3e-20
Identities = 42/79 (53%), Positives = 60/79 (75%)
Query: 74 KVSGQAE-GFIIVKYDSDLFIIDQHATDEKYNFETLQKTTVIKSQKLVVPQNLHLTKINQ 132
++ GQ GFI+ K DLF++DQHA DEKYNFE LQ+ TV+++Q+L+ PQ L+LT +N+
Sbjct: 665 EILGQFNLGFIVTKLKEDLFLVDQHAADEKYNFEMLQQHTVLQAQRLITPQTLNLTAVNE 724
Query: 133 CILKDNLPVFYKNGFEFRI 151
+L +NL +F KNGF+F I
Sbjct: 725 AVLIENLEIFRKNGFDFII 743
Score = 43 (20.2 bits), Expect = 4.3e-20, Sum P(2) = 4.3e-20
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 10 QLINIIPITQSSPDASLLEEF 30
QL +++P Q P S+ EE+
Sbjct: 235 QLQSLVPFVQLPPSDSVCEEY 255
>MGI|MGI:104288 [details] [associations]
symbol:Pms2 "postmeiotic segregation increased 2 (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=ISO] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0004518 "nuclease activity" evidence=IEA]
[GO:0004519 "endonuclease activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IMP] [GO:0006298 "mismatch
repair" evidence=ISO;IGI;IMP;TAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IGI;IMP] [GO:0007126 "meiosis"
evidence=TAS] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016446 "somatic hypermutation of immunoglobulin
genes" evidence=IMP] [GO:0016447 "somatic recombination of
immunoglobulin gene segments" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0030983 "mismatched DNA binding" evidence=IEA] [GO:0032138
"single base insertion or deletion binding" evidence=ISO]
[GO:0032389 "MutLalpha complex" evidence=IDA] [GO:0032407
"MutSalpha complex binding" evidence=IBA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 MGI:MGI:104288 Prosite:PS00058 GO:GO:0005524
GO:GO:0016887 GO:GO:0006298 GO:GO:0003697 GO:GO:0090305
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0004519 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407 GO:GO:0016446
eggNOG:COG0323 GermOnline:ENSMUSG00000029613 GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
GO:GO:0016447 HOGENOM:HOG000165474 HOVERGEN:HBG008219 EMBL:U28724
IPI:IPI00133511 UniGene:Mm.2950 ProteinModelPortal:P54279
SMR:P54279 STRING:P54279 PhosphoSite:P54279 PRIDE:P54279
ChiTaRS:Pms2 Genevestigator:P54279 Uniprot:P54279
Length = 859
Score = 232 (86.7 bits), Expect = 7.1e-20, Sum P(2) = 7.1e-20
Identities = 42/79 (53%), Positives = 60/79 (75%)
Query: 74 KVSGQAE-GFIIVKYDSDLFIIDQHATDEKYNFETLQKTTVIKSQKLVVPQNLHLTKINQ 132
++ GQ GFI+ K DLF++DQHA DEKYNFE LQ+ TV+++Q+L+ PQ L+LT +N+
Sbjct: 674 EILGQFNLGFIVTKLKEDLFLVDQHAADEKYNFEMLQQHTVLQAQRLITPQTLNLTAVNE 733
Query: 133 CILKDNLPVFYKNGFEFRI 151
+L +NL +F KNGF+F I
Sbjct: 734 AVLIENLEIFRKNGFDFVI 752
Score = 41 (19.5 bits), Expect = 7.1e-20, Sum P(2) = 7.1e-20
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 10 QLINIIPITQSSPDASLLEEF 30
QL ++IP Q P ++ EE+
Sbjct: 235 QLQSLIPFVQLPPSDAVCEEY 255
>UNIPROTKB|Q69L72 [details] [associations]
symbol:OSJNBa0016G10.12 "Os02g0592300 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032407 "MutSalpha complex
binding" evidence=IBA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0009555
GO:GO:0016887 GO:GO:0048316 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 EMBL:AP008208 EMBL:CM000139
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
eggNOG:COG0323 GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 KO:K10858 OMA:LDKPWNC
EMBL:AP005874 RefSeq:NP_001047292.1 UniGene:Os.23276 STRING:Q69L72
EnsemblPlants:LOC_Os02g37920.1 GeneID:4329835 KEGG:osa:4329835
ProtClustDB:CLSN2689293 Uniprot:Q69L72
Length = 923
Score = 174 (66.3 bits), Expect = 7.7e-19, Sum P(2) = 7.7e-19
Identities = 37/75 (49%), Positives = 47/75 (62%)
Query: 74 KVSGQAE-GFIIVKYDSDLFIIDQHATDEKYNFETLQKTTVIKSQKLVVPQNLHLTKINQ 132
+V GQ GFII K D DLFI+DQHA DEKYNFE L ++T + Q L+ P L L+ +
Sbjct: 718 EVVGQFNLGFIIGKLDQDLFIVDQHAADEKYNFENLSQSTTLNIQPLLQPLRLDLSPEEE 777
Query: 133 CILKDNLPVFYKNGF 147
I+ N+ KNGF
Sbjct: 778 VIVSMNMSTIRKNGF 792
Score = 91 (37.1 bits), Expect = 7.7e-19, Sum P(2) = 7.7e-19
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 42 LSGFISSAIHGHGRSTADRQFYFVNSRPCEPSKVS 76
+ GF+S G GR++ DRQF++VN RP + KVS
Sbjct: 246 VDGFLSKPGPGSGRNSGDRQFFYVNGRPVDMPKVS 280
>RGD|1305483 [details] [associations]
symbol:Pms2 "PMS2 postmeiotic segregation increased 2 (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0003697 "single-stranded DNA
binding" evidence=IBA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016446 "somatic hypermutation of immunoglobulin
genes" evidence=IBA] [GO:0016447 "somatic recombination of
immunoglobulin gene segments" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IBA] [GO:0032138 "single base insertion or
deletion binding" evidence=IEA] [GO:0032300 "mismatch repair
complex" evidence=IBA] [GO:0032389 "MutLalpha complex"
evidence=IBA] [GO:0032407 "MutSalpha complex binding" evidence=IBA]
[GO:0042493 "response to drug" evidence=IEP] InterPro:IPR002099
InterPro:IPR013507 InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676
SMART:SM00853 RGD:1305483 GO:GO:0005524 GO:GO:0042493 GO:GO:0016887
GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 EMBL:CH474012 GO:GO:0007131
GO:GO:0032407 GO:GO:0016446 GO:GO:0032389 PANTHER:PTHR10073
GO:GO:0032138 GO:GO:0016447 KO:K10858 GeneTree:ENSGT00530000063289
CTD:5395 IPI:IPI00949952 RefSeq:NP_001099378.1 UniGene:Rn.102072
Ensembl:ENSRNOT00000067021 GeneID:288479 KEGG:rno:288479
NextBio:628138 Uniprot:D4A360
Length = 542
Score = 232 (86.7 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 42/79 (53%), Positives = 60/79 (75%)
Query: 74 KVSGQAE-GFIIVKYDSDLFIIDQHATDEKYNFETLQKTTVIKSQKLVVPQNLHLTKINQ 132
++ GQ GFI+ K DLF++DQHA DEKYNFE LQ+ TV+++Q+L+ PQ L+LT +N+
Sbjct: 357 EILGQFNLGFIVTKLKEDLFLVDQHAADEKYNFEMLQQHTVLQAQRLITPQTLNLTAVNE 416
Query: 133 CILKDNLPVFYKNGFEFRI 151
+L +NL +F KNGF+F I
Sbjct: 417 AVLIENLEIFRKNGFDFII 435
>DICTYBASE|DDB_G0283981 [details] [associations]
symbol:pms1 "MutL DNA mismatch repair protein"
species:44689 "Dictyostelium discoideum" [GO:0032389 "MutLalpha
complex" evidence=IEA;IBA] [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA;ISS;IBA]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0016887 "ATPase
activity" evidence=ISS;IBA] [GO:0006200 "ATP catabolic process"
evidence=ISS;IBA] [GO:0003677 "DNA binding" evidence=ISS]
[GO:0032407 "MutSalpha complex binding" evidence=IBA] [GO:0032300
"mismatch repair complex" evidence=IBA] [GO:0007131 "reciprocal
meiotic recombination" evidence=IBA] [GO:0003697 "single-stranded
DNA binding" evidence=IBA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 dictyBase:DDB_G0283981 Prosite:PS00058 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 EMBL:AAFI02000058 eggNOG:COG0323 GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
PANTHER:PTHR10073:SF9 HSSP:P54278 RefSeq:XP_638844.1
ProteinModelPortal:Q54QA0 STRING:Q54QA0 EnsemblProtists:DDB0232417
GeneID:8624368 KEGG:ddi:DDB_G0283981 KO:K10858 OMA:TINECED
ProtClustDB:CLSZ2846737 Uniprot:Q54QA0
Length = 1022
Score = 180 (68.4 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 43/81 (53%), Positives = 53/81 (65%)
Query: 75 VSGQAE-GFIIVKYDSDLFIIDQHATDEKYNFETLQKT--TVIKSQKLVVPQNLH-LTKI 130
V GQ GFII K +DLFIIDQHA DEKYNFE L K+ + I SQ L+ P L LT
Sbjct: 816 VIGQFNLGFIIAKLGNDLFIIDQHAADEKYNFEILSKSVESSINSQPLLKPDTLSDLTSE 875
Query: 131 NQCILKDNLPVFYKNGFEFRI 151
+ I+ +N+ +F KNGF+F I
Sbjct: 876 EELIIIENVDLFKKNGFKFII 896
Score = 81 (33.6 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 16/22 (72%), Positives = 19/22 (86%)
Query: 55 RSTADRQFYFVNSRPCEPSKVS 76
RS ADRQF+FVNSRP E SK++
Sbjct: 291 RSCADRQFFFVNSRPFEHSKLA 312
>TAIR|locus:2133274 [details] [associations]
symbol:PMS1 "POSTMEIOTIC SEGREGATION 1" species:3702
"Arabidopsis thaliana" [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IC] [GO:0006200 "ATP catabolic
process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=ISS;IMP] [GO:0007131 "reciprocal meiotic recombination"
evidence=RCA;IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0030983 "mismatched DNA binding" evidence=IEA;IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0006310 "DNA recombination"
evidence=IMP] [GO:0009555 "pollen development" evidence=RCA;IMP]
[GO:0010154 "fruit development" evidence=IMP] [GO:0048316 "seed
development" evidence=IMP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=RCA] [GO:0006261 "DNA-dependent
DNA replication" evidence=RCA] [GO:0006275 "regulation of DNA
replication" evidence=RCA] [GO:0006306 "DNA methylation"
evidence=RCA] [GO:0006312 "mitotic recombination" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007129 "synapsis" evidence=RCA] [GO:0007140 "male meiosis"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009560 "embryo sac egg cell differentiation" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009691
"cytokinin biosynthetic process" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0009845
"seed germination" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010050 "vegetative phase change"
evidence=RCA] [GO:0010072 "primary shoot apical meristem
specification" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=RCA] [GO:0010431
"seed maturation" evidence=RCA] [GO:0010564 "regulation of cell
cycle process" evidence=RCA] [GO:0016444 "somatic cell DNA
recombination" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016568 "chromatin modification" evidence=RCA]
[GO:0019915 "lipid storage" evidence=RCA] [GO:0031047 "gene
silencing by RNA" evidence=RCA] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0048366 "leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] [GO:0051301 "cell division" evidence=RCA] [GO:0051726
"regulation of cell cycle" evidence=RCA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
EMBL:CP002687 GO:GO:0009555 GO:GO:0016887 GO:GO:0048316
GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032389 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9
HSSP:P54278 KO:K10858 HOGENOM:HOG000165474 OMA:LDKPWNC
ProtClustDB:CLSN2689293 EMBL:AY047228 IPI:IPI00544288
RefSeq:NP_567236.1 UniGene:At.26416 ProteinModelPortal:Q941I6
SMR:Q941I6 STRING:Q941I6 PRIDE:Q941I6 EnsemblPlants:AT4G02460.1
GeneID:827997 KEGG:ath:AT4G02460 TAIR:At4g02460 InParanoid:Q941I6
PhylomeDB:Q941I6 Genevestigator:Q941I6 Uniprot:Q941I6
Length = 923
Score = 166 (63.5 bits), Expect = 3.3e-18, Sum P(2) = 3.3e-18
Identities = 34/75 (45%), Positives = 49/75 (65%)
Query: 74 KVSGQAE-GFIIVKYDSDLFIIDQHATDEKYNFETLQKTTVIKSQKLVVPQNLHLTKINQ 132
+V GQ GFII K + DLFI+DQHA DEK+NFE L ++TV+ Q L+ P NL L+ +
Sbjct: 706 QVLGQFNLGFIIAKLERDLFIVDQHAADEKFNFEHLARSTVLNQQPLLQPLNLELSPEEE 765
Query: 133 CILKDNLPVFYKNGF 147
+ ++ + +NGF
Sbjct: 766 VTVLMHMDIIRENGF 780
Score = 93 (37.8 bits), Expect = 3.3e-18, Sum P(2) = 3.3e-18
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 42 LSGFISSAIHGHGRSTADRQFYFVNSRPCEPSKVS 76
+ GF+S G GR+ ADRQ++F+N RP + KVS
Sbjct: 254 VEGFLSKPGQGTGRNLADRQYFFINGRPVDMPKVS 288
>ASPGD|ASPL0000093218 [details] [associations]
symbol:AN11853 species:162425 "Emericella nidulans"
[GO:0032389 "MutLalpha complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0032139 "dinucleotide insertion or
deletion binding" evidence=IEA] [GO:0003697 "single-stranded DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000404 "loop DNA binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0000710 "meiotic mismatch repair"
evidence=IEA] [GO:0043570 "maintenance of DNA repeat elements"
evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 EMBL:AACD01000107 EMBL:BN001301 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 InterPro:IPR009395 Pfam:PF06320 eggNOG:COG0323
GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 KO:K10858
HOGENOM:HOG000165474 OrthoDB:EOG4FFH9B RefSeq:XP_663920.1
ProteinModelPortal:Q5AZG4 STRING:Q5AZG4
EnsemblFungi:CADANIAT00006671 GeneID:2870963 KEGG:ani:AN6316.2
OMA:SDFAKMK Uniprot:Q5AZG4
Length = 1228
Score = 163 (62.4 bits), Expect = 6.9e-18, Sum P(2) = 6.9e-18
Identities = 31/61 (50%), Positives = 44/61 (72%)
Query: 87 YDSDLFIIDQHATDEKYNFETLQKTTVIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNG 146
+ +LFIIDQHA+DEK NFE LQ TT +++Q+LV P+ L LT + + I+ +N + KNG
Sbjct: 789 FKDELFIIDQHASDEKINFERLQSTTTVQNQRLVHPKRLDLTAVEEEIVIENQVILEKNG 848
Query: 147 F 147
F
Sbjct: 849 F 849
Score = 96 (38.9 bits), Expect = 6.9e-18, Sum P(2) = 6.9e-18
Identities = 22/60 (36%), Positives = 30/60 (50%)
Query: 11 LINIIPITQSSPDASLLEEFRIPPDITAMFTLSGFISSAIHGHGRSTADRQFYFVNSRPC 70
L+ +IP+ + E + D + + G IS + G GR T DRQ FVNSRPC
Sbjct: 220 LLALIPLDLELQFEPSVAETMMAGDKKSNIQVRGHISRPVFGEGRQTPDRQMLFVNSRPC 279
>ASPGD|ASPL0000095187 [details] [associations]
symbol:AN11854 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 EMBL:AACD01000107 EMBL:BN001301 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 InterPro:IPR009395 Pfam:PF06320 eggNOG:COG0323
GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 KO:K10858
HOGENOM:HOG000165474 OrthoDB:EOG4FFH9B RefSeq:XP_663920.1
ProteinModelPortal:Q5AZG4 STRING:Q5AZG4
EnsemblFungi:CADANIAT00006671 GeneID:2870963 KEGG:ani:AN6316.2
OMA:SDFAKMK Uniprot:Q5AZG4
Length = 1228
Score = 163 (62.4 bits), Expect = 6.9e-18, Sum P(2) = 6.9e-18
Identities = 31/61 (50%), Positives = 44/61 (72%)
Query: 87 YDSDLFIIDQHATDEKYNFETLQKTTVIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNG 146
+ +LFIIDQHA+DEK NFE LQ TT +++Q+LV P+ L LT + + I+ +N + KNG
Sbjct: 789 FKDELFIIDQHASDEKINFERLQSTTTVQNQRLVHPKRLDLTAVEEEIVIENQVILEKNG 848
Query: 147 F 147
F
Sbjct: 849 F 849
Score = 96 (38.9 bits), Expect = 6.9e-18, Sum P(2) = 6.9e-18
Identities = 22/60 (36%), Positives = 30/60 (50%)
Query: 11 LINIIPITQSSPDASLLEEFRIPPDITAMFTLSGFISSAIHGHGRSTADRQFYFVNSRPC 70
L+ +IP+ + E + D + + G IS + G GR T DRQ FVNSRPC
Sbjct: 220 LLALIPLDLELQFEPSVAETMMAGDKKSNIQVRGHISRPVFGEGRQTPDRQMLFVNSRPC 279
>UNIPROTKB|Q5AZG4 [details] [associations]
symbol:AN6316.2 "ATP-binding protein (Eurofung)"
species:227321 "Aspergillus nidulans FGSC A4" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032407 "MutSalpha complex
binding" evidence=IBA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 EMBL:AACD01000107 EMBL:BN001301 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 InterPro:IPR009395 Pfam:PF06320 eggNOG:COG0323
GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 KO:K10858
HOGENOM:HOG000165474 OrthoDB:EOG4FFH9B RefSeq:XP_663920.1
ProteinModelPortal:Q5AZG4 STRING:Q5AZG4
EnsemblFungi:CADANIAT00006671 GeneID:2870963 KEGG:ani:AN6316.2
OMA:SDFAKMK Uniprot:Q5AZG4
Length = 1228
Score = 163 (62.4 bits), Expect = 6.9e-18, Sum P(2) = 6.9e-18
Identities = 31/61 (50%), Positives = 44/61 (72%)
Query: 87 YDSDLFIIDQHATDEKYNFETLQKTTVIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNG 146
+ +LFIIDQHA+DEK NFE LQ TT +++Q+LV P+ L LT + + I+ +N + KNG
Sbjct: 789 FKDELFIIDQHASDEKINFERLQSTTTVQNQRLVHPKRLDLTAVEEEIVIENQVILEKNG 848
Query: 147 F 147
F
Sbjct: 849 F 849
Score = 96 (38.9 bits), Expect = 6.9e-18, Sum P(2) = 6.9e-18
Identities = 22/60 (36%), Positives = 30/60 (50%)
Query: 11 LINIIPITQSSPDASLLEEFRIPPDITAMFTLSGFISSAIHGHGRSTADRQFYFVNSRPC 70
L+ +IP+ + E + D + + G IS + G GR T DRQ FVNSRPC
Sbjct: 220 LLALIPLDLELQFEPSVAETMMAGDKKSNIQVRGHISRPVFGEGRQTPDRQMLFVNSRPC 279
>POMBASE|SPAC19G12.02c [details] [associations]
symbol:pms1 "MutL family mismatch-repair protein Pms1"
species:4896 "Schizosaccharomyces pombe" [GO:0000228 "nuclear
chromosome" evidence=ISO] [GO:0003677 "DNA binding" evidence=ISO]
[GO:0005524 "ATP binding" evidence=ISO] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006298 "mismatch repair" evidence=IGI;IMP]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0030983 "mismatched
DNA binding" evidence=IEA] [GO:0032389 "MutLalpha complex"
evidence=IEA] [GO:0043570 "maintenance of DNA repeat elements"
evidence=IMP] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF02518 Pfam:PF08676
SMART:SM00387 SMART:SM00853 PomBase:SPAC19G12.02c Prosite:PS00058
GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0016887
GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0000228 GO:GO:0043570 eggNOG:COG0323
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
PANTHER:PTHR10073:SF9 KO:K10858 EMBL:X96581 PIR:T37989
RefSeq:NP_594417.1 ProteinModelPortal:P54280 STRING:P54280
EnsemblFungi:SPAC19G12.02c.1 GeneID:2542582 KEGG:spo:SPAC19G12.02c
HOGENOM:HOG000165474 OMA:LDKPWNC OrthoDB:EOG4FFH9B NextBio:20803632
Uniprot:P54280
Length = 794
Score = 170 (64.9 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 35/81 (43%), Positives = 53/81 (65%)
Query: 74 KVSGQAE-GFIIVKYDSDLFIIDQHATDEKYNFETLQKTTVIKSQKLVVPQNLHLTKINQ 132
+V GQ GFI+V + ++LFIIDQHA+DEK+N+E L+ VI SQ LV+P+ L L +
Sbjct: 612 RVVGQFNRGFIVVVHGNNLFIIDQHASDEKFNYEHLKSNLVINSQDLVLPKRLDLAATEE 671
Query: 133 CILKDNLPVFYKNGFEFRITM 153
+L D++ + + GF I +
Sbjct: 672 TVLIDHIDLIRRKGFGVAIDL 692
Score = 50 (22.7 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 42 LSGFISSAIHGHGRSTADRQFYFVNSRPCEPSKVS 76
+ G+IS G R++ +RQ F+N R K++
Sbjct: 237 IEGYISRPHVGSTRASNERQMLFINRRLVNLPKIA 271
>WB|WBGene00004064 [details] [associations]
symbol:pms-2 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006298 "mismatch
repair" evidence=IEA] [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF02518 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
GO:GO:0009792 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 HSSP:P54278 KO:K10858
OMA:LDKPWNC GeneTree:ENSGT00530000063289 EMBL:Z74033 EMBL:AL022272
PIR:B89219 PIR:T21953 PIR:T21957 RefSeq:NP_505933.1
ProteinModelPortal:G5EFG5 SMR:G5EFG5 IntAct:G5EFG5 PRIDE:G5EFG5
EnsemblMetazoa:H12C20.2a GeneID:179587 KEGG:cel:CELE_H12C20.2
CTD:179587 WormBase:H12C20.2a NextBio:906048 Uniprot:G5EFG5
Length = 805
Score = 194 (73.4 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 44/134 (32%), Positives = 71/134 (52%)
Query: 21 SPDASLLEEFRIPPDITAMFTLSGFISSAIHGHGRSTADRQFY-FVNSRPCEPSKVSGQA 79
SP ++ +++A + I++ I+ A+RQ + K+ GQ
Sbjct: 566 SPKTDETDDNTEEAEVSAEKDVLNEITTKINKEENDDAERQLSRSLTKDDFSKMKIIGQF 625
Query: 80 E-GFIIVKYDSDLFIIDQHATDEKYNFETLQKTTVIKSQKLVVPQNLHLTKINQCILKDN 138
GFII + LFI+DQHA+DEKYNFE LQ + + Q L +P L + + I+++N
Sbjct: 626 NHGFIICRLRGHLFIVDQHASDEKYNFERLQSSAKLTKQPLFMPTALGFGAVQELIIREN 685
Query: 139 LPVFYKNGFEFRIT 152
LP+F+ NGF+F +
Sbjct: 686 LPIFHANGFDFEFS 699
Score = 139 (54.0 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 27/65 (41%), Positives = 41/65 (63%)
Query: 14 IIPITQSSPDASLLEEFRIPPD---ITAMFTLSGFISSAIHGHGRSTADRQFYFVNSRPC 70
+IPI Q+ PD ++ +P + +F + GF+SS HG GR T+DRQF ++N+RP
Sbjct: 237 LIPIQQNQPDVEIMTIHSVPMEEMHFFDLFKIRGFVSSCEHGCGRGTSDRQFVYINNRPV 296
Query: 71 EPSKV 75
E S+V
Sbjct: 297 EYSRV 301
>UNIPROTKB|G5EFG5 [details] [associations]
symbol:pms-2 "Protein PMS-2, isoform a" species:6239
"Caenorhabditis elegans" [GO:0006200 "ATP catabolic process"
evidence=IBA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0032407 "MutSalpha complex binding" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032300 "mismatch repair
complex" evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IBA]
[GO:0006298 "mismatch repair" evidence=IBA] [GO:0003697
"single-stranded DNA binding" evidence=IBA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR015434 Pfam:PF01119 Pfam:PF02518
Pfam:PF08676 SMART:SM00387 SMART:SM00853 Prosite:PS00058
GO:GO:0005524 GO:GO:0009792 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407 GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
PANTHER:PTHR10073:SF9 HSSP:P54278 KO:K10858 OMA:LDKPWNC
GeneTree:ENSGT00530000063289 EMBL:Z74033 EMBL:AL022272 PIR:B89219
PIR:T21953 PIR:T21957 RefSeq:NP_505933.1 ProteinModelPortal:G5EFG5
SMR:G5EFG5 IntAct:G5EFG5 PRIDE:G5EFG5 EnsemblMetazoa:H12C20.2a
GeneID:179587 KEGG:cel:CELE_H12C20.2 CTD:179587 WormBase:H12C20.2a
NextBio:906048 Uniprot:G5EFG5
Length = 805
Score = 194 (73.4 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 44/134 (32%), Positives = 71/134 (52%)
Query: 21 SPDASLLEEFRIPPDITAMFTLSGFISSAIHGHGRSTADRQFY-FVNSRPCEPSKVSGQA 79
SP ++ +++A + I++ I+ A+RQ + K+ GQ
Sbjct: 566 SPKTDETDDNTEEAEVSAEKDVLNEITTKINKEENDDAERQLSRSLTKDDFSKMKIIGQF 625
Query: 80 E-GFIIVKYDSDLFIIDQHATDEKYNFETLQKTTVIKSQKLVVPQNLHLTKINQCILKDN 138
GFII + LFI+DQHA+DEKYNFE LQ + + Q L +P L + + I+++N
Sbjct: 626 NHGFIICRLRGHLFIVDQHASDEKYNFERLQSSAKLTKQPLFMPTALGFGAVQELIIREN 685
Query: 139 LPVFYKNGFEFRIT 152
LP+F+ NGF+F +
Sbjct: 686 LPIFHANGFDFEFS 699
Score = 139 (54.0 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 27/65 (41%), Positives = 41/65 (63%)
Query: 14 IIPITQSSPDASLLEEFRIPPD---ITAMFTLSGFISSAIHGHGRSTADRQFYFVNSRPC 70
+IPI Q+ PD ++ +P + +F + GF+SS HG GR T+DRQF ++N+RP
Sbjct: 237 LIPIQQNQPDVEIMTIHSVPMEEMHFFDLFKIRGFVSSCEHGCGRGTSDRQFVYINNRPV 296
Query: 71 EPSKV 75
E S+V
Sbjct: 297 EYSRV 301
>UNIPROTKB|Q7SAM1 [details] [associations]
symbol:NCU08020 "Putative uncharacterized protein"
species:367110 "Neurospora crassa OR74A" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032407 "MutSalpha complex
binding" evidence=IBA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR015434
Pfam:PF08676 SMART:SM00387 SMART:SM00853 Prosite:PS00058
GO:GO:0005524 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 GO:GO:0007131
GO:GO:0032407 GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 KO:K10858
HOGENOM:HOG000165474 OrthoDB:EOG4FFH9B EMBL:AABX02000051
OMA:SDFAKMK RefSeq:XP_962690.2 UniGene:Ncr.24794
ProteinModelPortal:Q7SAM1 STRING:Q7SAM1
EnsemblFungi:EFNCRT00000008289 GeneID:3878856 KEGG:ncr:NCU08020
Uniprot:Q7SAM1
Length = 894
Score = 188 (71.2 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 35/64 (54%), Positives = 48/64 (75%)
Query: 88 DSDLFIIDQHATDEKYNFETLQKTTVIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGF 147
D +LFIIDQHA+DEKYNFE LQ TT ++SQ+LV P+ L LT + + I+ ++LP NGF
Sbjct: 662 DDELFIIDQHASDEKYNFERLQSTTTVQSQRLVQPKPLTLTAVEEEIILEHLPALAANGF 721
Query: 148 EFRI 151
+ R+
Sbjct: 722 QVRV 725
>UNIPROTKB|E1BA65 [details] [associations]
symbol:PMS2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0032407 "MutSalpha complex binding" evidence=IEA]
[GO:0032389 "MutLalpha complex" evidence=IEA] [GO:0032138 "single
base insertion or deletion binding" evidence=IEA] [GO:0016447
"somatic recombination of immunoglobulin gene segments"
evidence=IEA] [GO:0016446 "somatic hypermutation of immunoglobulin
genes" evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 Pfam:PF01119 SMART:SM00387
Prosite:PS00058 GO:GO:0005524 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0016446
GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032138 GO:GO:0016447
GeneTree:ENSGT00530000063289 EMBL:DAAA02058333 IPI:IPI00699806
Ensembl:ENSBTAT00000037121 OMA:PSDSICE Uniprot:E1BA65
Length = 675
Score = 171 (65.3 bits), Expect = 7.4e-12, P = 7.4e-12
Identities = 33/69 (47%), Positives = 46/69 (66%)
Query: 10 QLINIIPITQSSPDASLLEEFRIPPD--ITAMFTLSGFISSAIHGHGRSTADRQFYFVNS 67
QL ++IP Q P S+ EE+ + + +F +SGF+S HG GRS+ DRQF+F+N
Sbjct: 228 QLQSLIPFVQLPPSDSICEEYGLSCSQALHNLFCISGFVSHCAHGVGRSSTDRQFFFINR 287
Query: 68 RPCEPSKVS 76
RPC+PSKVS
Sbjct: 288 RPCDPSKVS 296
>GENEDB_PFALCIPARUM|MAL7P1.145 [details] [associations]
symbol:MAL7P1.145 "mismatch repair protein
pms1 homologue, putative" species:5833 "Plasmodium falciparum"
[GO:0003684 "damaged DNA binding" evidence=ISS] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0003684
GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:AL844506 HSSP:P23367 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9
RefSeq:XP_001349161.1 ProteinModelPortal:Q8IBJ3 IntAct:Q8IBJ3
MINT:MINT-1637001 EnsemblProtists:MAL7P1.145:mRNA GeneID:2655088
KEGG:pfa:MAL7P1.145 EuPathDB:PlasmoDB:PF3D7_0726300 Uniprot:Q8IBJ3
Length = 1330
Score = 131 (51.2 bits), Expect = 9.4e-12, Sum P(2) = 9.4e-12
Identities = 27/61 (44%), Positives = 39/61 (63%)
Query: 91 LFIIDQHATDEKYNFETLQKTTVIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFR 150
LFIIDQHA DEK NFE K +KSQKL+ ++ ++ I++ + +F +NGFE +
Sbjct: 1065 LFIIDQHAADEKSNFEKYNKIFTMKSQKLISKIHVQVSPAQVHIIQKYMSIFLQNGFEVQ 1124
Query: 151 I 151
I
Sbjct: 1125 I 1125
Score = 70 (29.7 bits), Expect = 9.4e-12, Sum P(2) = 9.4e-12
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 40 FTLSGFISSAIHGHGRSTADRQFYFVNSRPCEPSKVSGQAEGFIIVKYDSDLFII 94
+ + G+IS + GR D QFY++NSRP K + I +++S L+ I
Sbjct: 241 WNIRGYISDS--NSGRRDKDLQFYYINSRPIHILKNVNKLINTIYREFNSRLYPI 293
Score = 35 (17.4 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 51 HGHGRSTADRQFYFVNSRP 69
H H +ST+ Q + N +P
Sbjct: 378 HHHHKSTSPSQKHKGNEKP 396
>UNIPROTKB|Q8IBJ3 [details] [associations]
symbol:MAL7P1.145 "Mismatch repair protein pms1 homologue,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0003684
"damaged DNA binding" evidence=ISS] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0003684
GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:AL844506 HSSP:P23367 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9
RefSeq:XP_001349161.1 ProteinModelPortal:Q8IBJ3 IntAct:Q8IBJ3
MINT:MINT-1637001 EnsemblProtists:MAL7P1.145:mRNA GeneID:2655088
KEGG:pfa:MAL7P1.145 EuPathDB:PlasmoDB:PF3D7_0726300 Uniprot:Q8IBJ3
Length = 1330
Score = 131 (51.2 bits), Expect = 9.4e-12, Sum P(2) = 9.4e-12
Identities = 27/61 (44%), Positives = 39/61 (63%)
Query: 91 LFIIDQHATDEKYNFETLQKTTVIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFR 150
LFIIDQHA DEK NFE K +KSQKL+ ++ ++ I++ + +F +NGFE +
Sbjct: 1065 LFIIDQHAADEKSNFEKYNKIFTMKSQKLISKIHVQVSPAQVHIIQKYMSIFLQNGFEVQ 1124
Query: 151 I 151
I
Sbjct: 1125 I 1125
Score = 70 (29.7 bits), Expect = 9.4e-12, Sum P(2) = 9.4e-12
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 40 FTLSGFISSAIHGHGRSTADRQFYFVNSRPCEPSKVSGQAEGFIIVKYDSDLFII 94
+ + G+IS + GR D QFY++NSRP K + I +++S L+ I
Sbjct: 241 WNIRGYISDS--NSGRRDKDLQFYYINSRPIHILKNVNKLINTIYREFNSRLYPI 293
Score = 35 (17.4 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 51 HGHGRSTADRQFYFVNSRP 69
H H +ST+ Q + N +P
Sbjct: 378 HHHHKSTSPSQKHKGNEKP 396
>UNIPROTKB|A8IT98 [details] [associations]
symbol:CHLREDRAFT_101121 "Predicted protein" species:3055
"Chlamydomonas reinhardtii" [GO:0003697 "single-stranded DNA
binding" evidence=IBA] [GO:0006200 "ATP catabolic process"
evidence=IBA] [GO:0006298 "mismatch repair" evidence=IBA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IBA]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0032300 "mismatch
repair complex" evidence=IBA] [GO:0032389 "MutLalpha complex"
evidence=IBA] [GO:0032407 "MutSalpha complex binding" evidence=IBA]
InterPro:IPR002099 InterPro:IPR014790 InterPro:IPR015434
Pfam:PF08676 SMART:SM00853 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 GO:GO:0003697 GO:GO:0030983 GO:GO:0007131
GO:GO:0032407 eggNOG:COG0323 GO:GO:0032389 PANTHER:PTHR10073
PANTHER:PTHR10073:SF9 KO:K10858 EMBL:DS496122 RefSeq:XP_001692227.1
EnsemblPlants:EDP04177 GeneID:5717917 KEGG:cre:CHLREDRAFT_101121
ProtClustDB:CLSN2921379 Uniprot:A8IT98
Length = 193
Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 32/80 (40%), Positives = 51/80 (63%)
Query: 74 KVSGQAE-GFIIVKYDSDLFIIDQHATDEKYNFETLQKTTVIKSQKLVVPQNLH---LTK 129
+V GQ GFI+ + D+FI+DQHA DEK FE LQ++ + Q L+ P L L
Sbjct: 2 QVLGQFNLGFILAAHGRDVFIVDQHAADEKTTFERLQRSVALTRQPLLAPMPLPPGLLLP 61
Query: 130 INQCILKDNLPVFYKNGFEF 149
++Q ++++++ VF +NGF+F
Sbjct: 62 LDQLLIREHIDVFRRNGFDF 81
>UNIPROTKB|Q22B61 [details] [associations]
symbol:TTHERM_01109940 "DNA mismatch repair protein,
C-terminal domain containing protein" species:312017 "Tetrahymena
thermophila SB210" [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0006200 "ATP catabolic process" evidence=IBA]
[GO:0006298 "mismatch repair" evidence=IBA] [GO:0007131 "reciprocal
meiotic recombination" evidence=IBA] [GO:0016887 "ATPase activity"
evidence=IBA] [GO:0032300 "mismatch repair complex" evidence=IBA]
[GO:0032389 "MutLalpha complex" evidence=IBA] [GO:0032407
"MutSalpha complex binding" evidence=IBA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
GO:GO:0016887 GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 KO:K10858
ProtClustDB:CLSZ2846737 EMBL:GG662565 RefSeq:XP_001030203.2
UniGene:Tth.6164 ProteinModelPortal:Q22B61 EnsemblProtists:EAR82540
GeneID:7840245 KEGG:tet:TTHERM_01109940 Uniprot:Q22B61
Length = 946
Score = 155 (59.6 bits), Expect = 6.1e-10, P = 6.1e-10
Identities = 36/81 (44%), Positives = 50/81 (61%)
Query: 74 KVSGQAEGFIIVKY--DSD-LFIIDQHATDEKYNFETLQKTTVIKSQKLVVPQNLHLTKI 130
++ GQ I+ Y + D +F+IDQHA+DEK N+E L K + QKLV P L LT
Sbjct: 747 QIIGQFNKAFIIAYWVEKDQIFLIDQHASDEKTNYERLLKENNFQGQKLVKPIELSLTIQ 806
Query: 131 NQCILKDNLPVFYKNGFEFRI 151
IL++N +F KNGF+F+I
Sbjct: 807 EADILENNREIFKKNGFQFQI 827
>UNIPROTKB|Q7RPM0 [details] [associations]
symbol:PY01438 "DNA mismatch repair protein, C-terminal
domain, putative" species:73239 "Plasmodium yoelii yoelii"
[GO:0003697 "single-stranded DNA binding" evidence=IBA] [GO:0006200
"ATP catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032407 "MutSalpha complex
binding" evidence=IBA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
eggNOG:COG0323 GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 HSSP:P54278 KO:K10858
EMBL:AABL01000381 RefSeq:XP_729204.1 ProteinModelPortal:Q7RPM0
GeneID:3801758 KEGG:pyo:PY01438 EuPathDB:PlasmoDB:PY01438
Uniprot:Q7RPM0
Length = 1157
Score = 140 (54.3 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 30/61 (49%), Positives = 37/61 (60%)
Query: 91 LFIIDQHATDEKYNFETLQKTTVIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFR 150
LFIIDQHA DEK NFE K +KSQKL+ L L+ I++ N +F +NGFE
Sbjct: 871 LFIIDQHAADEKSNFEKYNKIFTMKSQKLINKIELELSPAQIHIIEKNFVIFLRNGFEIE 930
Query: 151 I 151
I
Sbjct: 931 I 931
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.137 0.399 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 200 175 0.00078 109 3 11 22 0.37 32
31 0.49 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 31
No. of states in DFA: 569 (61 KB)
Total size of DFA: 139 KB (2086 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:04
No. of threads or processors used: 24
Search cpu time: 15.45u 0.09s 15.54t Elapsed: 00:00:12
Total cpu time: 15.45u 0.09s 15.54t Elapsed: 00:00:16
Start: Thu Aug 15 13:09:39 2013 End: Thu Aug 15 13:09:55 2013