Diaphorina citri psyllid: psy13676


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200
MGHVSLTISQLINIIPITQSSPDASLLEEFRIPPDITAMFTLSGFISSAIHGHGRSTADRQFYFVNSRPCEPSKVSGQAEGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTVIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFRITMMFANLRNGDGTSRKKKKKKKKKKKKKKKKKKKKKKKKKRLYIFKKHT
ccccccHHHHHccccccccccccHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEECcccEEEEEccccHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHcccEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccEEEEcccc
*****LTISQLINIIPITQSSPDASLLEEFRIPPDITAMFTLSGFISSAIHGHGRSTADRQFYFVNSRPCEPSKVSGQAEGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTVIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFRITMMFANLRN********************************LYIFKK**
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MGHVSLTISQLINIIPITQSSPDASLLEEFRIPPDITAMFTLSGFISSAIHGHGRSTADRQFYFVNSRPCEPSKVSGQAEGFIIVKYDSDLFIIDQHATDEKYNFETLQKTTVIKSQKLVVPQNLHLTKINQCILKDNLPVFYKNGFEFRITMMFANLRNGDGTSxxxxxxxxxxxxxxxxxxxxxxxxxxxxYIFKKHT

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0000404 [MF]loop DNA bindingprobableGO:0043566, GO:0097159, GO:0000217, GO:0030983, GO:0003674, GO:0005488, GO:0003676, GO:0003677, GO:0003690, GO:0032135, GO:1901363
GO:0032139 [MF]dinucleotide insertion or deletion bindingprobableGO:0043566, GO:0097159, GO:1901363, GO:0030983, GO:0003674, GO:0005488, GO:0003676, GO:0003677, GO:0032135, GO:0003690
GO:0003697 [MF]single-stranded DNA bindingprobableGO:0043566, GO:0097159, GO:0003674, GO:0005488, GO:0003676, GO:0003677, GO:1901363
GO:0005737 [CC]cytoplasmprobableGO:0044424, GO:0005575, GO:0044464, GO:0005623, GO:0005622

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 3KDG, chain A
Confidence level:confident
Coverage over the Query: 70-156
View the alignment between query and template
View the model in PyMOL
Template: 1H7S, chain A
Confidence level:confident
Coverage over the Query: 38-97
View the alignment between query and template
View the model in PyMOL
Template: 3NA3, chain A
Confidence level:probable
Coverage over the Query: 11-90
View the alignment between query and template
View the model in PyMOL