RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy13682
(175 letters)
>2x7b_A N-acetyltransferase SSO0209; HET: COA; 1.95A {Sulfolobus
solfataricus}
Length = 168
Score = 184 bits (468), Expect = 2e-60
Identities = 49/158 (31%), Positives = 76/158 (48%), Gaps = 12/158 (7%)
Query: 3 TLRAFTCDDMFKFNNVNLDPLTETYGLSFYMQYLAHWPEYFQVAESPTGEIMGYIMGKAE 62
TLR DD+ + +N L E Y F++++L + F VA ++GYIM + E
Sbjct: 14 TLRNARMDDIDQIIKINRLTLPENYPYYFFVEHLKEYGLAFFVAI-VDNSVVGYIMPRIE 72
Query: 63 GHGDK--------WHGHVTALTVAPDYRRLGIAAELMSW-LEDISEKKRAYFVDLFVRVS 113
GHV ++ V +YRR GIA L+ ++ + A + L VRVS
Sbjct: 73 WGFSNIKQLPSLVRKGHVVSIAVLEEYRRKGIATTLLEASMKSMKNDYNAEEIYLEVRVS 132
Query: 114 NTVAITMYKRLGYIVYRTVLEYYSGSPDEDAYDMRKAL 151
N AI +Y++L + + + YY+ EDAY M + L
Sbjct: 133 NYPAIALYEKLNFKKVKVLKGYYAD--GEDAYLMARPL 168
>2ob0_A Human MAK3 homolog; acetyltransferase, structural genomics
consortium, SGC; HET: ACO; 1.80A {Homo sapiens} PDB:
2psw_A* 3tfy_A*
Length = 170
Score = 167 bits (426), Expect = 7e-54
Identities = 35/160 (21%), Positives = 68/160 (42%), Gaps = 3/160 (1%)
Query: 3 TLRAFTCDDMFKFNNVNLDPLTETYGLSFYMQYLAHWPEYFQVAESPTGEIMGYIMGKAE 62
L T ++ + +N +Y FY L E ++A +G + + +
Sbjct: 8 ELGDVTPHNIKQLKRLNQVIFPVSYNDKFYKDVL-EVGELAKLAYF-NDIAVGAVCCRVD 65
Query: 63 GHGDKWHGHVTALTVAPDYRRLGIAAELMSWLEDISEK-KRAYFVDLFVRVSNTVAITMY 121
++ ++ L YRRLGI ++++ + +I EK + L V++SN AI Y
Sbjct: 66 HSQNQKRLYIMTLGCLAPYRRLGIGTKMLNHVLNICEKDGTFDNIYLHVQISNESAIDFY 125
Query: 122 KRLGYIVYRTVLEYYSGSPDEDAYDMRKALSRDVHGKSVI 161
++ G+ + T YY DA+ ++K L + +
Sbjct: 126 RKFGFEIIETKKNYYKRIEPADAHVLQKNLKVPSGQNADV 165
>1mk4_A Hypothetical protein YQJY; alpha-beta-alpha sandwich, structural
genomics, PSI, protein structure initiative; 1.70A
{Bacillus subtilis} SCOP: d.108.1.1
Length = 157
Score = 89.8 bits (223), Expect = 1e-23
Identities = 21/136 (15%), Positives = 48/136 (35%), Gaps = 11/136 (8%)
Query: 24 TETYGLSFYMQYLAHWPEYFQVAESPTGEIMGYIMGKAEGHGDKWHGHVTALTVAPDYRR 83
+ H+ + + + G+++G + ++ V PD+R+
Sbjct: 25 GRQLKEKLPRLFFEHFQDTSFITSEH-NSMTGFLIGFQSQSDPET-AYIHFSGVHPDFRK 82
Query: 84 LGIAAELMSWLEDISEKKRAYFVDLFVRVSNTVAITMYKRLGYIVYRT--------VLEY 135
+ I +L + +++ V N V+I + +LG+ + + V
Sbjct: 83 MQIGKQLYDVFIETVKQRGCTRVKCVTSPVNKVSIAYHTKLGFDIEKGTKTVNGISVFAN 142
Query: 136 YSGSPDEDAYDMRKAL 151
Y G P +D K +
Sbjct: 143 YDG-PGQDRVLFVKNI 157
>2pdo_A Acetyltransferase YPEA; alpha-beta-alpha sandwich, structural
genomics, PSI-2, prote structure initiative; HET: MSE;
2.00A {Shigella flexneri 2A}
Length = 144
Score = 89.0 bits (221), Expect = 2e-23
Identities = 36/144 (25%), Positives = 57/144 (39%), Gaps = 8/144 (5%)
Query: 3 TLRAFTCDD---MFKFNNVNLDPLTETYGLSFYMQYLAHWPEYFQVAESPTGEIMGYIMG 59
+R F +D + + + H F VAE GE++G +MG
Sbjct: 5 EIRVFRQEDFEEVITLWERCDLLRPWNDPEMDIERKMNHDVSLFLVAEV-NGEVVGTVMG 63
Query: 60 KAEGHGDKWHGHVTALTVAPDYRRLGIAAELMSWLEDISEKKRAYFVDLFVRVSNTVAIT 119
+GH G L V P++R GIA L++ LE + + + V N + +
Sbjct: 64 GYDGH----RGSAYYLGVHPEFRGRGIANALLNRLEKKLIARGCPKIQINVPEDNDMVLG 119
Query: 120 MYKRLGYIVYRTVLEYYSGSPDED 143
MY+RLGY + DE+
Sbjct: 120 MYERLGYEHADVLSLGKRLIEDEE 143
>2cnt_A Modification of 30S ribosomal subunit protein S18; N-alpha
acetylation, GCN5-N-acetyltransferase, ribosomal Pro
acetyltransferase, GNAT; HET: COA; 2.4A {Salmonella
typhimurium} PDB: 2cnm_A* 2cns_A*
Length = 160
Score = 83.1 bits (206), Expect = 7e-21
Identities = 33/161 (20%), Positives = 59/161 (36%), Gaps = 15/161 (9%)
Query: 1 MTTLRAFTCDDMFKF----NNVNLDPLTETYGLSFYMQYLAHWPEYFQVAESPTGEIMGY 56
M T+ + D+ + P +E + ++ + +
Sbjct: 1 MNTISILSTTDLPAAWQIEQRAHAFPWSE----KTFFGNQGERYLNLKLTAD--DRMAAF 54
Query: 57 IMGKAEGHGDKWHGHVTALTVAPDYRRLGIAAELMSWLEDISEKKRAYFVDLFVRVSNTV 116
+ + D + + V PD++R G+ L+ L D E + + L VR SN
Sbjct: 55 AITQV--VLD--EATLFNIAVDPDFQRRGLGRMLLEHLIDELETRGVVTLWLEVRASNAA 110
Query: 117 AITMYKRLGYIVYRTVLEYY-SGSPDEDAYDMRKALSRDVH 156
AI +Y+ LG+ YY + EDA M +S +H
Sbjct: 111 AIALYESLGFNEATIRRNYYPTAQGHEDAIIMALPISMKLH 151
>2aj6_A Hypothetical protein MW0638; structural genomics, joint center for
structural genomics, J protein structure initiative,
PSI-2; HET: MSE UNL; 1.63A {Staphylococcus aureus subsp}
SCOP: d.108.1.1
Length = 159
Score = 77.9 bits (192), Expect = 6e-19
Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 3/106 (2%)
Query: 30 SFYMQYLAHWPEYFQVAESPTGEIMGYIMGKAEGHGDKWHGHVTALTVAPDYRRLGIAAE 89
L H + + E+ G+++ +I G +K ++ L V P +R+LGIA +
Sbjct: 54 EMICSRLEHTNDKIYIYEN-EGQLIAFIWG--HFSNEKSMVNIELLYVEPQFRKLGIATQ 110
Query: 90 LMSWLEDISEKKRAYFVDLFVRVSNTVAITMYKRLGYIVYRTVLEY 135
L LE ++ A + + +N I++ K LGY V +
Sbjct: 111 LKIALEKWAKTMNAKRISNTIHKNNLPMISLNKDLGYQVSHVKMYK 156
>3pp9_A Putative streptothricin acetyltransferase; toxin production
resistance, infectious diseases, structural genomics;
HET: MSE ACO; 1.60A {Bacillus anthracis}
Length = 187
Score = 77.6 bits (191), Expect = 1e-18
Identities = 25/128 (19%), Positives = 53/128 (41%), Gaps = 7/128 (5%)
Query: 23 LTETYGLSFYMQYLAHWPEYFQVAESPTGEIMGYIMGKAEGHGDKWHGHVTALTVAPDYR 82
L Y +Y+ + +A +I+G+I+ K + + ++ +TV YR
Sbjct: 58 LQNDNEELVYNEYINKPNQIIYIALL-HNQIIGFIVLKKNWNN---YAYIEDITVDKKYR 113
Query: 83 RLGIAAELMSWLEDISEKKRAYFVDLFVRVSNTVAITMYKRLGYIVYRTVLEYYSGSP-- 140
LG+ L++ + +++ + L + +N A Y++ G+++ Y G
Sbjct: 114 TLGVGKRLIAQAKQWAKEGNMPGIMLETQNNNVAACKFYEKCGFVIGGFDFLVYKGLNMT 173
Query: 141 -DEDAYDM 147
DE A
Sbjct: 174 SDEVAIYW 181
>2i6c_A Putative acetyltransferase; GNAT family, structural genomic,
structur genomics, PSI-2, protein structure initiative;
HET: MSE EPE; 1.30A {Pseudomonas aeruginosa} SCOP:
d.108.1.1 PDB: 3pgp_A*
Length = 160
Score = 76.7 bits (189), Expect = 2e-18
Identities = 26/114 (22%), Positives = 47/114 (41%), Gaps = 4/114 (3%)
Query: 40 PEYFQVAESPTGEIMGYIMGKAEGHGDKWHGHVTALTVAPDYRRLGIAAELMSWLEDIS- 98
VA G+++G+ HGD + + VAP R LG+A L+ +E+++
Sbjct: 49 RRGSTVAVH-DGQVLGFANFYQWQHGD--FCALGNMMVAPAARGLGVARYLIGVMENLAR 105
Query: 99 EKKRAYFVDLFVRVSNTVAITMYKRLGYIVYRTVLEYYSGSPDEDAYDMRKALS 152
E+ +A + + +N + +Y +LGY + M K L
Sbjct: 106 EQYKARLMKISCFNANAAGLLLYTQLGYQPRAIAERHDPDGRRVALIQMDKPLE 159
>3kkw_A Putative uncharacterized protein; acetyltransferase, GNAT family,
structural genomics, PSI, protein structure initiative;
1.41A {Pseudomonas aeruginosa PAO1}
Length = 182
Score = 75.2 bits (185), Expect = 1e-17
Identities = 26/114 (22%), Positives = 47/114 (41%), Gaps = 4/114 (3%)
Query: 40 PEYFQVAESPTGEIMGYIMGKAEGHGDKWHGHVTALTVAPDYRRLGIAAELMSWLEDIS- 98
VA G+++G+ HGD + + VAP R LG+A L+ +E+++
Sbjct: 71 RRGSTVAVH-DGQVLGFANFYQWQHGD--FCALGNMMVAPAARGLGVARYLIGVMENLAR 127
Query: 99 EKKRAYFVDLFVRVSNTVAITMYKRLGYIVYRTVLEYYSGSPDEDAYDMRKALS 152
E+ +A + + +N + +Y +LGY + M K L
Sbjct: 128 EQYKARLMKISCFNANAAGLLLYTQLGYQPRAIAERHDPDGRRVALIQMDKPLE 181
>2r7h_A Putative D-alanine N-acetyltransferase of GNAT FA; putative
acetyltransferase of the GNAT family; 1.85A
{Desulfovibrio desulfuricans subsp}
Length = 177
Score = 74.4 bits (183), Expect = 2e-17
Identities = 16/123 (13%), Positives = 38/123 (30%), Gaps = 6/123 (4%)
Query: 32 YMQYLAHWPEYFQVAESPTGEIMGYIMGKAEGHGDKWHGHVTALTVAPDYRRLGIAAELM 91
++ + A +F A ++ GY + + + VAP + G+ L+
Sbjct: 59 HLMHGAACGYHFVFAT-EDDDMAGYACYGPTPATEG-TYDLYWIAVAPHRQHSGLGRALL 116
Query: 92 SWLEDISEKKRAYFVDLFVRV--SNTVAITMYKRLGYIVYRTVLEYYSGSPDEDAYDMRK 149
+ + + Y+R G+ + +Y +D R
Sbjct: 117 AEVVHDVRLTGGRLLFAETSGIRKYAPTRRFYERAGFSAEAVLKAFY--RAGDDKIIYRL 174
Query: 150 ALS 152
++
Sbjct: 175 EVA 177
>1sqh_A Hypothetical protein CG14615-PA; structural genomics, PSI, protein
structure initiative, northeast structural genomics
consortium, NESG; 2.00A {Drosophila melanogaster} SCOP:
d.108.1.5
Length = 312
Score = 75.2 bits (184), Expect = 7e-17
Identities = 21/112 (18%), Positives = 42/112 (37%), Gaps = 8/112 (7%)
Query: 31 FYMQYLAHWPEYFQVAESPTGEIMGYIMGKAEGHGDKWHGHVTALTVAPDYRRLGIAAEL 90
Y+Q L + + + S TGE++ +I + L V P R G+ L
Sbjct: 200 TYLQALVRFNKSLGICRSDTGELIAWIFQN-------DFSGLGMLQVLPKAERRGLGGLL 252
Query: 91 MSWLEDISEKKRAYFVDLFVRVSNTVAITMYKRLGYIVYRTVLEYYSGSPDE 142
+ + + + ++ +N + + KR+GY E+ P+
Sbjct: 253 AAAMSREIARGEEITLTAWIVATNWRSEALLKRIGYQKDLVN-EWIKLVPNS 303
>1on0_A YYCN protein; structural genomics, alpha-beta protein with
anti-parallel B strands, PSI, protein structure
initiative; 2.20A {Bacillus subtilis} SCOP: d.108.1.1
Length = 158
Score = 72.5 bits (178), Expect = 8e-17
Identities = 19/152 (12%), Positives = 45/152 (29%), Gaps = 18/152 (11%)
Query: 1 MTTLRAFTCDD----MFKFNNVNLDPLTETYGLS----------FYMQYLAHWPE----Y 42
L ++ + + + + L E +
Sbjct: 2 TIMLTPMQTEEFRSYLTYTTKHYAEEKVKAGTWLPEDAQLLSKQVFTDLLPRGLETPHHH 61
Query: 43 FQVAESPTGEIMGYIMGKAEGHGDKWHGHVTALTVAPDYRRLGIAAELMSWLEDISEKKR 102
+ +I+G++ AE + + + YR G A + ++ L+ +
Sbjct: 62 LWSLKLNEKDIVGWLWIHAEPEHPQQEAFIYDFGLYEPYRGKGYAKQALAALDQAARSMG 121
Query: 103 AYFVDLFVRVSNTVAITMYKRLGYIVYRTVLE 134
+ L V N A +Y++ G+ V+
Sbjct: 122 IRKLSLHVFAHNQTARKLYEQTGFQETDVVMS 153
>1wwz_A Hypothetical protein PH1933; structural genomics, pyrococcus
horikoshii OT3, riken struct genomics/proteomics
initiative, RSGI; HET: ACO; 1.75A {Pyrococcus
horikoshii} SCOP: d.108.1.1
Length = 159
Score = 71.7 bits (176), Expect = 1e-16
Identities = 22/148 (14%), Positives = 53/148 (35%), Gaps = 14/148 (9%)
Query: 1 MTTLRAFTCDDMFKFNNVNLD---------PLTETYGLSFYMQYLAHWPEYFQVAESPTG 51
+ L+ + + +V + Y ++ + F VA+
Sbjct: 6 IEKLKKLDKKALNELIDVYMSGYEGLEEYGGEGRDYARNYIKWCWKKASDGFFVAKV-GD 64
Query: 52 EIMGYIMGKAEG---HGDKWHGHVTALTVAPDYRRLGIAAELMSWLEDISEKKRAYFVDL 108
+I+G+I+ + + + G + V ++ GI +L+ D K ++L
Sbjct: 65 KIVGFIVCDKDWFSKYEGRIVGAIHEFVVDKKFQGKGIGRKLLITCLDFL-GKYNDTIEL 123
Query: 109 FVRVSNTVAITMYKRLGYIVYRTVLEYY 136
+V N A+ +Y++ G+ +
Sbjct: 124 WVGEKNYGAMNLYEKFGFKKVGKSGIWV 151
>1ufh_A YYCN protein; alpha and beta, fold, acetyltransferase, structural
genomics, PSI, protein structure initiative; 2.20A
{Bacillus subtilis subsp} SCOP: d.108.1.1
Length = 180
Score = 71.4 bits (175), Expect = 3e-16
Identities = 16/93 (17%), Positives = 36/93 (38%)
Query: 42 YFQVAESPTGEIMGYIMGKAEGHGDKWHGHVTALTVAPDYRRLGIAAELMSWLEDISEKK 101
+ + +I+G++ AE + + + YR G A + ++ L+ +
Sbjct: 85 HLWSLKLNEKDIVGWLWIHAEPEHPQQEAFIYDFGLYEPYRGKGYAKQALAALDQAARSM 144
Query: 102 RAYFVDLFVRVSNTVAITMYKRLGYIVYRTVLE 134
+ L V N A +Y++ G+ V+
Sbjct: 145 GIRKLSLHVFAHNQTARKLYEQTGFQETDVVMS 177
>3bln_A Acetyltransferase GNAT family; NP_981174.1, structural genom joint
center for structural genomics, JCSG, protein structu
initiative, PSI-2; HET: MSE MRD GOL; 1.31A {Bacillus
cereus}
Length = 143
Score = 70.4 bits (173), Expect = 3e-16
Identities = 25/147 (17%), Positives = 49/147 (33%), Gaps = 21/147 (14%)
Query: 1 MTTLRAFTCDDMFKFNNVNLDPLTETYGLSF----YMQYLAHWPE--YFQVAESPTGEIM 54
M + + DD LD + Y+ H + + + I
Sbjct: 2 MKNVTKASIDD--------LDSIVHIDIDVIGNDSRRNYIKHSIDEGRCVIVKE-DNSIS 52
Query: 55 GYIMGKAEGHGDKWHGHVTALTVAPDYRRLGIAAELMSWLEDISEKKRAYFVDLFVRVSN 114
G++ ++ + V+P RR G A+ L+S++ S ++ + SN
Sbjct: 53 GFLTYDTNFFD---CTFLSLIIVSPTKRRRGYASSLLSYMLSHSPTQKIF---SSTNESN 106
Query: 115 TVAITMYKRLGYIVYRTVLEYYSGSPD 141
++ G+I V G P+
Sbjct: 107 ESMQKVFNANGFIRSGIVENLDEGDPE 133
>3ec4_A Putative acetyltransferase from the GNAT family; YP_497011.1, joint
center for structural genomics; 1.80A {Novosphingobium
aromaticivorans dsm 12ORGANISM_TAXID}
Length = 228
Score = 71.8 bits (176), Expect = 5e-16
Identities = 19/82 (23%), Positives = 32/82 (39%), Gaps = 3/82 (3%)
Query: 51 GEIMGYIMGKAEGHGDKWHGHVTALTVAPDYRRLGIAAELMSWLEDISEKKRAYFVDLFV 110
G + + + V+ + P+YR G+AA L+ + R L
Sbjct: 141 GRLAAMAGERMRPAPN--LAEVSGVCTWPEYRGRGLAARLIRKVIAGM-AARGEVPYLHS 197
Query: 111 RVSNTVAITMYKRLGYIVYRTV 132
SN AI +Y+ LG+ R +
Sbjct: 198 YASNASAIRLYESLGFRARRAM 219
>2dxq_A AGR_C_4057P, acetyltransferase; structural genomics, PSI-2, protein
struc initiative, midwest center for structural
genomics, MCSG; 1.80A {Agrobacterium tumefaciens str}
Length = 150
Score = 69.7 bits (171), Expect = 7e-16
Identities = 15/118 (12%), Positives = 33/118 (27%), Gaps = 4/118 (3%)
Query: 22 PLTETYGLSFYMQYLAHWPEYFQVAESPTGEIMGYIMGKAEG---HGDKWHGHVTALTVA 78
LT + + LA VA G+ + + + + +
Sbjct: 32 ELTTQEAGAVFAAMLAQPGLTIFVATE-NGKPVATATLLIVPNLTRAARPYAFIENVVTL 90
Query: 79 PDYRRLGIAAELMSWLEDISEKKRAYFVDLFVRVSNTVAITMYKRLGYIVYRTVLEYY 136
R G ++ + + Y V L + Y+ G++ +T +
Sbjct: 91 EARRGRGYGRTVVRHAIETAFGANCYKVMLLTGRHDPAVHAFYESCGFVQNKTGFQIR 148
>1vkc_A Putative acetyl transferase; structural genomics, pyrococcus
furiosus southeast collaboratory for structural
genomics, secsg; 1.89A {Pyrococcus furiosus} SCOP:
d.108.1.1
Length = 158
Score = 69.8 bits (171), Expect = 7e-16
Identities = 22/106 (20%), Positives = 46/106 (43%), Gaps = 3/106 (2%)
Query: 31 FYMQYLAHWPEYFQVAESPTGEIMGYIMGKAEGHGDKW--HGHVTALTVAPDYRRLGIAA 88
+ L+ F VA + E++G++ + ++ + V R LGI +
Sbjct: 51 LFESLLSQGEHKFFVALNERSELLGHVWICITLDTVDYVKIAYIYDIEVVKWARGLGIGS 110
Query: 89 ELMSWLEDISEKKRAYFVDLFVRVSNTVAITMYKRLGYIVYRTVLE 134
L+ E+ ++++ A + L V + N A+ Y+ GY ++E
Sbjct: 111 ALLRKAEEWAKERGAKKIVLRVEIDNP-AVKWYEERGYKARALIME 155
>1tiq_A Protease synthase and sporulation negative regulatory protein PAI
1; alpha-beta protein, structural genomics, PSI; HET:
COA; 1.90A {Bacillus subtilis} SCOP: d.108.1.1
Length = 180
Score = 69.7 bits (171), Expect = 1e-15
Identities = 24/138 (17%), Positives = 51/138 (36%), Gaps = 6/138 (4%)
Query: 23 LTETYGLSFYMQYLAHWPEYFQVAESPTGEIMGYIM----GKAEGHGDKWHGHVTALTVA 78
L + + L++ F EI GY+ + + +
Sbjct: 41 LESAFNTEQLEKELSNMSSQFFFIYF-DHEIAGYVKVNIDDAQSEEMGAESLEIERIYIK 99
Query: 79 PDYRRLGIAAELMSWLEDISEKKRAYFVDLFVRVSNTVAITMYKRLGYIVYRTVLEYYSG 138
+++ G+ L++ +I+ ++ + L V N AI YK++G++ +Y G
Sbjct: 100 NSFQKHGLGKHLLNKAIEIALERNKKNIWLGVWEKNENAIAFYKKMGFVQTGAH-SFYMG 158
Query: 139 SPDEDAYDMRKALSRDVH 156
++ M K L + H
Sbjct: 159 DEEQTDLIMAKTLILEHH 176
>1y9k_A IAA acetyltransferase; structural genomics, midwest center for
structural genomics bacillus cereus ATCC 14579, PSI;
2.39A {Bacillus cereus atcc 14579} SCOP: d.108.1.1
Length = 157
Score = 68.9 bits (169), Expect = 2e-15
Identities = 16/115 (13%), Positives = 44/115 (38%), Gaps = 13/115 (11%)
Query: 51 GEIMGYIMGKAEGHGDKWHGHVTALTVAPDYRRLGIAAELMSWLEDISEKKRAYFVDLFV 110
G ++G + + + VA + GI +L+ + ++ +++
Sbjct: 46 GSVIGVYVLLETRPK---TMEIMNIAVAEHLQGKGIGKKLLRHAVETAKGYGMSKLEVGT 102
Query: 111 RVSNTVAITMYKRLGYIVYRTVLEYYS----------GSPDEDAYDMRKALSRDV 155
S+ + +Y++ G+ ++ +Y+S G D + L+++V
Sbjct: 103 GNSSVSQLALYQKCGFRIFSIDFDYFSKHYEEEIIENGIVCRDMIRLAMELNKNV 157
>3jvn_A Acetyltransferase; alpha-beta protein, structural genomics, PSI-2,
protein STRU initiative, northeast structural genomics
consortium, NESG; 2.61A {Vibrio fischeri}
Length = 166
Score = 68.6 bits (168), Expect = 3e-15
Identities = 26/131 (19%), Positives = 44/131 (33%), Gaps = 6/131 (4%)
Query: 10 DDMFKFNNVNLDPLTETYGLSFYMQYLAHWPEYFQVAESPTGEIMGYIMGKAEGHGDKWH 69
D+ + +E +YL VAE I+G+I G
Sbjct: 25 DEHHQQCPDLFKTASEIEEEKSIARYLDDPECMVYVAEM-DDVIIGFITGHFCELISTVS 83
Query: 70 -----GHVTALTVAPDYRRLGIAAELMSWLEDISEKKRAYFVDLFVRVSNTVAITMYKRL 124
+ L + +YRR G+A +LM +E + + + V N A+ Y +
Sbjct: 84 KLVMMATIDELYIEKEYRREGVAEQLMMRIEQELKDYGVKEIFVEVWDFNKGALEFYNKQ 143
Query: 125 GYIVYRTVLEY 135
G + L
Sbjct: 144 GLNEHIHYLRK 154
>1bo4_A Protein (serratia marcescens aminoglycoside-3-N-
acetyltransferase); eubacterial aminoglyco resistance,
GCN5-related N-acetyltransferase; HET: SPD COA; 2.30A
{Serratia marcescens} SCOP: d.108.1.1
Length = 168
Score = 67.2 bits (164), Expect = 9e-15
Identities = 19/97 (19%), Positives = 42/97 (43%), Gaps = 2/97 (2%)
Query: 32 YMQYLAHWPEYFQVAESPTGEIMGYIMG--KAEGHGDKWHGHVTALTVAPDYRRLGIAAE 89
Y+ L + +A ++G + + + ++ L V+ ++RR GIA
Sbjct: 66 YLGNLLRSKTFIALAAFDQEAVVGALAAYVLPKFEQPRSEIYIYDLAVSGEHRRQGIATA 125
Query: 90 LMSWLEDISEKKRAYFVDLFVRVSNTVAITMYKRLGY 126
L++ L+ + AY + + + A+ +Y +LG
Sbjct: 126 LINLLKHEANALGAYVIYVQADYGDDPAVALYTKLGI 162
>1z4e_A Transcriptional regulator; nysgxrc target T2017, GNAT fold,
structural genomics, PSI, P structure initiative; 2.00A
{Bacillus halodurans} SCOP: d.108.1.1
Length = 153
Score = 65.9 bits (161), Expect = 2e-14
Identities = 17/95 (17%), Positives = 39/95 (41%), Gaps = 4/95 (4%)
Query: 45 VAESPTGEIMGYIM---GKAEGHGDKWHGHVTALTVAPDYRRLGIAAELMSWLEDISEKK 101
VA + EI+G + + W + + R GI ++L+ W + ++++
Sbjct: 59 VACN-GEEIVGMLQVTFTPYLTYQGSWRATIEGVRTHSAARGQGIGSQLVCWAIERAKER 117
Query: 102 RAYFVDLFVRVSNTVAITMYKRLGYIVYRTVLEYY 136
+ + L A+ Y++LG+ L+ +
Sbjct: 118 GCHLIQLTTDKQRPDALRFYEQLGFKASHEGLKMH 152
>3d3s_A L-2,4-diaminobutyric acid acetyltransferase; alpha-beta-alpha
sandwich, structural genomics, PSI-2, prote structure
initiative; HET: MSE; 1.87A {Bordetella parapertussis
12822}
Length = 189
Score = 66.4 bits (162), Expect = 3e-14
Identities = 22/125 (17%), Positives = 41/125 (32%), Gaps = 2/125 (1%)
Query: 3 TLRAFTCDDMFKFNNVNLD-PLTETYGLSFYMQYLAHWPEYFQVAESPTGEIMGYIMGKA 61
LR +D + + + P + L Y+ H VAESP G I G++
Sbjct: 28 HLRPPRRNDGAAIHQLVSECPPLDLNSLYAYLLLCEHHAHTCVVAESPGGRIDGFVSAYL 87
Query: 62 EGHGDKWHGHVTALTVAPDYRRLGIAAELMSWLEDISEKKRAYFVDLFVRVSNTVAITMY 121
V + V R + ++ + + E + ++ V N + +
Sbjct: 88 LPT-RPDVLFVWQVAVHSRARGHRLGRAMLGHILERQECRHVRHLETTVGPDNQASRRTF 146
Query: 122 KRLGY 126
L
Sbjct: 147 AGLAG 151
>1yvk_A Hypothetical protein BSU33890; ALPHS-beta protein, structural
genomics, PSI, protein structure initiative; HET: COA;
3.01A {Bacillus subtilis subsp} SCOP: d.108.1.1
Length = 163
Score = 65.1 bits (159), Expect = 5e-14
Identities = 14/117 (11%), Positives = 40/117 (34%), Gaps = 13/117 (11%)
Query: 51 GEIMGYIMGKAEGHGDKWHGHVTALTVAPDYRRLGIAAELMSWLEDISEKKRAYFVDLFV 110
E+ G + + + V ++ G +L+ + ++K A +++
Sbjct: 48 DELAGVYVLLKTRPQ---TVEIVNIAVKESLQKKGFGKQLVLDAIEKAKKLGADTIEIGT 104
Query: 111 RVSNTVAITMYKRLGYIVYRTVLEYYS----------GSPDEDAYDMRKALSRDVHG 157
S+ +++Y++ G+ + +++ G D + L H
Sbjct: 105 GNSSIHQLSLYQKCGFRIQAIDHDFFLRHYDEDIFENGIQCRDMVRLYLDLLEHHHH 161
>1s3z_A Aminoglycoside 6'-N-acetyltransferase; GNAT, aminoglycoside
ribostamycin; HET: COA RIO; 2.00A {Salmonella
enteritidis} SCOP: d.108.1.1 PDB: 1s5k_A* 1s60_A*
2vbq_A*
Length = 165
Score = 64.0 bits (156), Expect = 1e-13
Identities = 19/117 (16%), Positives = 44/117 (37%), Gaps = 6/117 (5%)
Query: 24 TETYGLSFYMQYLAHWPEYFQVAESPTGEIMGYIMGK-----AEGHGDKWHGHVTALTVA 78
+ L+ + L +A + G +G+ G + + V
Sbjct: 46 PDDAHLADGEEILQADHLASFIAMAD-GVAIGFADASIRHDYVNGCDSSPVVFLEGIFVL 104
Query: 79 PDYRRLGIAAELMSWLEDISEKKRAYFVDLFVRVSNTVAITMYKRLGYIVYRTVLEY 135
P +R+ G+A +L++ ++ K + NT++ +++ LG+ V+ Y
Sbjct: 105 PSFRQRGVAKQLIAAVQRWGTNKGCREMASDTSPENTISQKVHQALGFEETERVIFY 161
>4evy_A Aminoglycoside N(6')-acetyltransferase type 1; center for
structural genomics of infectious diseases (csgid
national institute of allergy and infectious diseases;
HET: TOY; 1.77A {Acinetobacter haemolyticus} PDB: 4f0y_A
4e8o_A
Length = 166
Score = 64.1 bits (156), Expect = 2e-13
Identities = 21/113 (18%), Positives = 41/113 (36%), Gaps = 6/113 (5%)
Query: 29 LSFYMQYLAHWPEYFQVAESPTGEIMGYIMGK-----AEGHGDKWHGHVTALTVAPDYRR 83
L Q LA +A S + + + G G + + V P +RR
Sbjct: 51 LQEMHQLLAEKYALQLLAYSD-HQAIAMLEASIRFEYVNGTETSPVGFLEGIYVLPAHRR 109
Query: 84 LGIAAELMSWLEDISEKKRAYFVDLFVRVSNTVAITMYKRLGYIVYRTVLEYY 136
G+A L+ E +++ + N ++ M++ LG+ V+ +
Sbjct: 110 SGVATMLIRQAEVWAKQFSCTEFASDAALDNVISHAMHRSLGFQETEKVVYFS 162
>1cjw_A Protein (serotonin N-acetyltransferase); HET: COT; 1.80A {Ovis
aries} SCOP: d.108.1.1 PDB: 1b6b_A
Length = 166
Score = 63.7 bits (155), Expect = 2e-13
Identities = 22/132 (16%), Positives = 40/132 (30%), Gaps = 18/132 (13%)
Query: 32 YMQYLAHWPEYFQVAESPTGEIMGYIMG-----------KAEGHGDKWH-GHVTALTVAP 79
+L PE G ++ +I+G H + H H+ AL V
Sbjct: 41 VQHFLTLCPELSLGWFV-EGRLVAFIIGSLWDEERLTQESLALHRPRGHSAHLHALAVHR 99
Query: 80 DYRRLGIAAELMSWLEDISEKKRAYFVDLFVRVSNTVAITMYKRLGYIVYRTVLEYYSGS 139
+R+ G + L+ + V V + + Y+R G+
Sbjct: 100 SFRQQGKGSVLLWRY--LHHVGAQPAVRRAVLMCEDALVPFYQRFGFHPAGPCAIVVGSL 157
Query: 140 PDEDAYDMRKAL 151
+M +L
Sbjct: 158 T---FTEMHCSL 166
>2vez_A Putative glucosamine 6-phosphate acetyltransferase;
acyltransferase; HET: ACO G6P; 1.45A {Aspergillus
fumigatus} PDB: 2vxk_A*
Length = 190
Score = 62.6 bits (152), Expect = 7e-13
Identities = 21/119 (17%), Positives = 38/119 (31%), Gaps = 6/119 (5%)
Query: 21 DPLTETYGLSFYMQYLAHWPEYFQVAESPTGEIMGYIMGKAE---GHGDKWHGHVTALTV 77
D E + + Y V G I+G E H GH+ + V
Sbjct: 74 DINEEQWNSRYEWIRARSDEYYLLVVCDGEGRIVGTGSLVVERKFIHSLGMVGHIEDIAV 133
Query: 78 APDYRRLGIAAELMSWLEDISEKKRAYFVDLFVRVSNTVAITMYKRLGYIVYRTVLEYY 136
+ + ++ L+ ++EK Y L +N Y + G+ + +Y
Sbjct: 134 EKGQQGKKLGLRIIQALDYVAEKVGCYKTILDCSEAN---EGFYIKCGFKRAGLEMAHY 189
>3c26_A Putative acetyltransferase TA0821; NP_394282.1, A putative
acetyltransferase, acetyltransferase family, structural
genomics; 2.00A {Thermoplasma acidophilum dsm 1728}
Length = 266
Score = 63.6 bits (154), Expect = 7e-13
Identities = 20/116 (17%), Positives = 36/116 (31%), Gaps = 6/116 (5%)
Query: 43 FQVAESPTGEIMGYIMGKAEGHGDKWHGHVTALTVAPDYRRLGIAAELMSWLEDISEKKR 102
V +G + I + G + L V P+YR + +M K
Sbjct: 62 VYVLRV-SGRPVATIHMEKLPDG---SVMLGGLRVHPEYRGSRLGMSIMQETIQFLRGKT 117
Query: 103 AYFVDLFVRVSNTVAITMYKRLGYIVYRTVLEYYSGSPDEDAYDMRKALSRDVHGK 158
+ V N ++ + RLG+ Y+ A K ++ G+
Sbjct: 118 ER-LRSAVYSWNEPSLRLVHRLGFHQVEE-YPIYTFQGGSTAVPALKPVNERYAGR 171
>1kux_A Aralkylamine, serotonin N-acetyltransferase; enzyme-inhibitor
complex, bisubstrate analog, alternate conformations;
HET: CA3; 1.80A {Ovis aries} SCOP: d.108.1.1 PDB:
1kuv_A* 1kuy_A* 1l0c_A* 1ib1_E*
Length = 207
Score = 62.7 bits (152), Expect = 9e-13
Identities = 22/130 (16%), Positives = 39/130 (30%), Gaps = 18/130 (13%)
Query: 36 LAHWPEYFQVAESPTGEIMGYIMG-----------KAEGHGDKWH-GHVTALTVAPDYRR 83
L PE G ++ +I+G H + H H+ AL V +R+
Sbjct: 74 LTLCPELSLGWFV-EGRLVAFIIGSLWDEERLTQESLALHRPRGHSAHLHALAVHRSFRQ 132
Query: 84 LGIAAELMSWLEDISEKKRAYFVDLFVRVSNTVAITMYKRLGYIVYRTVLEYYSGSPDED 143
G + L+ + V V + + Y+R G+
Sbjct: 133 QGKGSVLLW--RYLHHVGAQPAVRRAVLMCEDALVPFYQRFGFHPAGPCAIVVGSLT--- 187
Query: 144 AYDMRKALSR 153
+M +L
Sbjct: 188 FTEMHCSLRG 197
>3t90_A Glucose-6-phosphate acetyltransferase 1; GNAT fold, glcnac
biosynthesis, alpha/beta protein; HET: EPE; 1.50A
{Arabidopsis thaliana}
Length = 149
Score = 61.3 bits (149), Expect = 1e-12
Identities = 18/108 (16%), Positives = 35/108 (32%), Gaps = 6/108 (5%)
Query: 32 YMQYLAHWPEYFQVAESPTGEIMGYIMGKAE---GHGDKWHGHVTALTVAPDYRRLGIAA 88
++ + E +G+I E GH+ + V +R +
Sbjct: 43 EIRSYGDDHVICVIEEETSGKIAATGSVMIEKKFLRNCGKAGHIEDVVVDSRFRGKQLGK 102
Query: 89 ELMSWLEDISEKKRAYFVDLFVRVSNTVAITMYKRLGYIVYRTVLEYY 136
+++ +L D + Y V L V N Y++ G + Y
Sbjct: 103 KVVEFLMDHCKSMGCYKVILDCSVEN---KVFYEKCGMSNKSIQMSKY 147
>2o28_A Glucosamine 6-phosphate N-acetyltransferase; structural genomics,
structural genomics consortium, SGC; HET: 16G COA; 1.80A
{Homo sapiens} PDB: 2huz_A* 3cxq_A* 3cxs_A 3cxp_A
Length = 184
Score = 60.7 bits (147), Expect = 4e-12
Identities = 32/134 (23%), Positives = 48/134 (35%), Gaps = 13/134 (9%)
Query: 3 TLRAFTCDDMFKFNNVNLDPLTETYGLS------FYMQYLAHWPEYFQVAE-SPTGEIMG 55
LR D+ + L LTET +S + Y V E G+I+
Sbjct: 40 VLRPLCTADLNRGFFKVLGQLTETGVVSPEQFMKSFEHMKKSGDYYVTVVEDVTLGQIVA 99
Query: 56 YIMGKAE---GHGDKWHGHVTALTVAPDYRRLGIAAELMSWLEDISEKKRAYFVDLFVRV 112
E H G V + V+ + R + L+S L +S+K Y + L
Sbjct: 100 TATLIIEHKFIHSCAKRGRVEDVVVSDECRGKQLGKLLLSTLTLLSKKLNCYKITLECLP 159
Query: 113 SNTVAITMYKRLGY 126
N + YK+ GY
Sbjct: 160 QN---VGFYKKFGY 170
>1y9w_A Acetyltransferase; structural genomics, Pro structure initiative,
PSI, midwest center for structural GE MCSG; 1.90A
{Bacillus cereus} SCOP: d.108.1.1
Length = 140
Score = 59.6 bits (144), Expect = 5e-12
Identities = 26/111 (23%), Positives = 45/111 (40%), Gaps = 9/111 (8%)
Query: 41 EYFQVAESPTGEIMGYIMGKAEGHGDKWHGHVTALTVAPDYRRLGIAAELMSWLEDISEK 100
E V ++ G+I G + G + H H+ L V R G ++L+ +E I+++
Sbjct: 39 EVSLVVKNEEGKIFGGVTGTMYFY----HLHIDFLWVDESVRHDGYGSQLLHEIEGIAKE 94
Query: 101 KRAYFVDLFVRVSNTVAITMYKRLGYIVYRTVLEYYSGSPDEDAYDMRKAL 151
K + L + A YK+ GY Y V ++ + K L
Sbjct: 95 KGCRLILLDSF--SFQAPEFYKKHGYREYGVVEDHP---KGHSQHFFEKRL 140
>1u6m_A Acetyltransferase, GNAT family; structural genomics, PSI, protein
structure initiative; 2.40A {Enterococcus faecalis}
SCOP: d.108.1.1
Length = 199
Score = 60.0 bits (145), Expect = 8e-12
Identities = 16/88 (18%), Positives = 35/88 (39%), Gaps = 5/88 (5%)
Query: 69 HGHVTALTVAPDYRRLGIAAELMSWLEDISEKKRAYFVDLFVRVSNTVAITMYKRLGYIV 128
++ ++V +R +GI ++L+ L ++++ + L V N A +Y G+
Sbjct: 112 EWYLDTISVDERFRGMGIGSKLLDALPEVAKASGKQALGLNVDFDNPGARKLYASKGFKD 171
Query: 129 YRTVLEYYSGSPDEDAYDMRKALSRDVH 156
T+ M+K + H
Sbjct: 172 VTTM-----TISGHLYNHMQKEVEGGSH 194
>3t9y_A Acetyltransferase, GNAT family; PSI-biology, structural genomics,
midwest center for structu genomics, MCSG; HET: PGE;
2.00A {Staphylococcus aureus}
Length = 150
Score = 58.6 bits (142), Expect = 1e-11
Identities = 17/110 (15%), Positives = 36/110 (32%), Gaps = 5/110 (4%)
Query: 21 DPLTETYGLSFYMQYLAHWPEYFQVAESPTGEIMGYIMGKAEG--HGDKWHGHVTALTVA 78
P E + H + + +I+G + + + A +
Sbjct: 31 YPTNENDLKKRLKKITNHDDYFLLLLIKE-NKIIGLSGMCKMMFYEKNAEYMRILAFVIH 89
Query: 79 PDYRRLGIAAELMSWLEDISEKKRAYFVDLFV--RVSNTVAITMYKRLGY 126
++R+ G L++ E+ S++ + L R A +Y GY
Sbjct: 90 SEFRKKGYGKRLLADSEEFSKRLNCKAITLNSGNRNERLSAHKLYSDNGY 139
>1ghe_A Acetyltransferase; acyl coenzyme A complex; HET: ACO; 1.55A
{Pseudomonas syringae PV} SCOP: d.108.1.1 PDB: 1j4j_A*
Length = 177
Score = 59.1 bits (143), Expect = 1e-11
Identities = 21/139 (15%), Positives = 41/139 (29%), Gaps = 6/139 (4%)
Query: 20 LDPLTETYGLSFYMQYLAH--WPEYFQVAESPTGEIMGYIMGKAEGHGDKWH-GHVTALT 76
+ L ++ A + ++ + + V L
Sbjct: 38 MADLDMQQAYAWCDGLKADIAAGSLLLWVVAEDDNVLASAQLSLCQKPNGLNRAEVQKLM 97
Query: 77 VAPDYRRLGIAAELMSWLEDISEKKRAYFVDLFVRVSNTVAITMYKRLGYIVYRTVLEYY 136
V P R G+ +LM +E ++ K + + L + +VA Y L Y + Y
Sbjct: 98 VLPSARGRGLGRQLMDEVEQVAVKHKRGLLHLDTE-AGSVAEAFYSALAYTRVGELPGYC 156
Query: 137 SGSPDE--DAYDMRKALSR 153
+ K L +
Sbjct: 157 ATPDGRLHPTAIYFKTLGQ 175
>2fia_A Acetyltransferase; structural genomics, PSI, protein structu
initiative, midwest center for structural genomics,
MCSG; 2.60A {Enterococcus faecalis} SCOP: d.108.1.1
Length = 162
Score = 58.7 bits (142), Expect = 1e-11
Identities = 13/101 (12%), Positives = 27/101 (26%), Gaps = 3/101 (2%)
Query: 51 GEIMGYIMGKAEGHGDKWHGHVTALTVAPDYRRLGIAAELMSWLEDISEKKRAYFVDLFV 110
I ++ + +P+Y G + L LE + + +
Sbjct: 59 EMIFSMAT--FCMEQEQDFVWLKRFATSPNYIAKGYGSLLFHELEKRAVWEGRRKMYAQT 116
Query: 111 RVSNTVAITMYKRLGYIVYRTVLEYYSGSPDEDAYDMRKAL 151
+N I ++ G+ + Y K L
Sbjct: 117 NHTNHRMIRFFESKGF-TKIHESLQMNRLDFGSFYLYVKEL 156
>3fyn_A Integron gene cassette protein HFX_CASS3; integron cassette
protein, mobIle metagenome, structural genomics, PSI-2;
1.45A {Uncultured bacterium}
Length = 176
Score = 58.6 bits (142), Expect = 2e-11
Identities = 19/103 (18%), Positives = 34/103 (33%), Gaps = 4/103 (3%)
Query: 45 VAESPTGEIMGYIMGKAEG--HGDKWHGHVTALTVAPDYRRLGIAAELMSWLEDISEKKR 102
+ E +GYI+ G V V P+ R G+ A + ++
Sbjct: 75 LIAEG-TESVGYIVLTLGFSMEYGGLRGFVDDFFVRPNARGKGLGAAALQTVKQGCCDLG 133
Query: 103 AYFVDLFVRVSNTVAITMYKRLGYI-VYRTVLEYYSGSPDEDA 144
+ + + A +Y R G+ R +L P +A
Sbjct: 134 VRALLVETGPEDHPARGVYSRAGFEESGRMLLGQALAPPIHEA 176
>2q0y_A GCN5-related N-acetyltransferase; YP_295895.1, acetyltransferase
(GNAT) family, structural genomics, joint center for ST
genomics; HET: MSE; 1.80A {Ralstonia eutropha JMP134}
Length = 153
Score = 57.9 bits (140), Expect = 2e-11
Identities = 22/125 (17%), Positives = 41/125 (32%), Gaps = 11/125 (8%)
Query: 21 DPLTETYGLSFYMQYLAHWPEYFQVAESPTGEIMGYI-------MGKAEGHGDKWHGHVT 73
+ + + LA + V E G + I G++
Sbjct: 33 LAAMQDPFRDWLLPRLADGSYFGWVMEEG-GAPLAGIGLMVIEWPPHPSHPLQDKRGYIL 91
Query: 74 ALTVAPDYRRLGIAAELMSWLEDISEKKRAYFVDLFVRVSNTVAITMYKRLGYIVYRTVL 133
L V P +R GI LM+ E ++ F L + + +Y R+G+ +
Sbjct: 92 NLYVDPSHRERGIGQALMNRAEAEFAERGIAFAVLH---ATEMGQPLYARMGWSPTTEMS 148
Query: 134 EYYSG 138
+ +G
Sbjct: 149 KPIAG 153
>2ge3_A Probable acetyltransferase; structural GEN PSI, protein structure
initiative, midwest center for struc genomics, MCSG;
HET: ACO; 2.25A {Agrobacterium tumefaciens} SCOP:
d.108.1.1
Length = 170
Score = 58.1 bits (141), Expect = 3e-11
Identities = 27/138 (19%), Positives = 54/138 (39%), Gaps = 12/138 (8%)
Query: 3 TLRAFTCDDMFKFNNVNLDPLTETYGLSF-YMQYLAHWPEYFQ----------VAESPTG 51
T++ + + F+ E LSF L + VA + G
Sbjct: 9 TIKPIRAEHVESFHRALDAVSRERKYLSFLEAPPLEAVRAFVLDMIENDHPQFVAIA-DG 67
Query: 52 EIMGYIMGKAEGHGDKWHGHVTALTVAPDYRRLGIAAELMSWLEDISEKKRAYFVDLFVR 111
+++G+ + + + H + + P YR G+ A LM D + + + ++L V
Sbjct: 68 DVIGWCDIRRQDRATRAHCGTLGMGILPAYRNKGLGARLMRRTLDAAHEFGLHRIELSVH 127
Query: 112 VSNTVAITMYKRLGYIVY 129
N AI +Y+++G+
Sbjct: 128 ADNARAIALYEKIGFAHE 145
>3ld2_A SMU.2055, putative acetyltransferase; HET: COA; 2.50A
{Streptococcus mutans}
Length = 197
Score = 58.3 bits (141), Expect = 3e-11
Identities = 29/160 (18%), Positives = 54/160 (33%), Gaps = 15/160 (9%)
Query: 3 TLRAFTCDDMFKFNNVNLDPLTETYGLSFYM-----QYLAHWPE--YFQVAESPTGEIMG 55
+ D+ + + +E Q + + +F VA+ +I+G
Sbjct: 36 KISPMLLSDIEQVVELENKTWSEQNTPVPLPVASKDQIIQKFESNTHFLVAKI-KDKIVG 94
Query: 56 YIMGKAEGHGDKWHGHVTALT--VAPDYRRLGIAAELMSWLEDISEKKRAYFVDLFVRVS 113
+ + + H+ VA RR GI L+ + K V + V S
Sbjct: 95 VL-DYSSLYPFPSGQHIVTFGIAVAEKERRKGIGRALVQIFLNEV-KSDYQKVLIHVLSS 152
Query: 114 NTVAITMYKRLGYIVYRTVLEYY--SGSPDEDAYDMRKAL 151
N A+ YK+LG+ + + + + G D L
Sbjct: 153 NQEAVLFYKKLGFDLEARLTKQFFLKGQY-VDDLIYSYDL 191
>4ag7_A Glucosamine-6-phosphate N-acetyltransferase; HET: COA; 1.55A
{Caenorhabditis elegans} PDB: 4ag9_A*
Length = 165
Score = 57.2 bits (138), Expect = 4e-11
Identities = 27/145 (18%), Positives = 45/145 (31%), Gaps = 14/145 (9%)
Query: 3 TLRAFTCDDMFKFNNVNLDPLTETYGLS------FYMQYLAHWPEYFQVA--ESPTGEIM 54
+R DD K L LT L + P Y V +S + +++
Sbjct: 23 KVRPLAKDDFSKGYVDLLSQLTSVGNLDQEAFEKRFEAMRTSVPNYHIVVIEDSNSQKVV 82
Query: 55 GYIMGKAE---GHGDKWHGHVTALTVAPDYRRLGIAAELMSWLEDISEKKRAYFVDLFVR 111
E HG G V + V + RR + A L+ L + + Y + L
Sbjct: 83 ASASLVVEMKFIHGAGSRGRVEDVVVDTEMRRQKLGAVLLKTLVSLGKSLGVYKISLECV 142
Query: 112 VSNTVAITMYKRLGYIVYRTVLEYY 136
+ Y + G+ +
Sbjct: 143 PEL---LPFYSQFGFQDDCNFMTQR 164
>2ae6_A Acetyltransferase, GNAT family; GCN5-related N-acetyltransferase
(GNAT), alpha-beta, structu genomics, PSI, protein
structure initiative; HET: GOL; 2.19A {Enterococcus
faecalis} SCOP: d.108.1.1
Length = 166
Score = 56.9 bits (138), Expect = 5e-11
Identities = 25/109 (22%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 45 VAESPTGEIMGYIM-GKAEGHGDKWHGHVTALTVAPDYRRLGIAAELMSWLEDISEKKRA 103
VA S ++ G+I + ++ V+PD++ GI L+S+++D++E
Sbjct: 57 VAIS-GQQLAGFIEVHPPTSLAAHQKQWLLSIGVSPDFQDQGIGGSLLSYIKDMAEISGI 115
Query: 104 YFVDLFVRVSNTVAITMYKRLGYIVY-RTVLEYYSGSPDEDAYDMRKAL 151
+ + L V +N AI Y++ G++ E+Y D Y +
Sbjct: 116 HKLSLRVMATNQEAIRFYEKHGFVQEAHFKEEFYINGHYCDDYQYAYFI 164
>3mgd_A Predicted acetyltransferase; structural genomics, PSI-2, protein
structure initiative, no structural genomics consortium,
NESG; HET: ACO; 1.90A {Clostridium acetobutylicum}
Length = 157
Score = 56.3 bits (136), Expect = 1e-10
Identities = 22/151 (14%), Positives = 50/151 (33%), Gaps = 20/151 (13%)
Query: 1 MTTLRAFTCDD----------MFKFNNVNLDPLTETYGLSFYMQYLAHWPEYFQVAESPT 50
M R D + + + ++ LA+ +AE
Sbjct: 1 MMNYRKADMKDISLLVSIRKRQLIDEGIEPNIDIDKELTRYFNNKLANNLLVEWIAEEN- 59
Query: 51 GEIMGYIMGK------AEGHGDKWHGHVTALTVAPDYRRLGIAAELMSWLEDISEKKRAY 104
+I+ + G++T + P R GIA ++ L + ++++ +
Sbjct: 60 NQIIATAAIAFIDFPPTYTNKTGRKGYITNMYTEPTSRGNGIATGMLDRLVNEAKERNIH 119
Query: 105 FVDLFVRVSNTVAITMYKRLGYIVYRTVLEY 135
+ L ++ + +YK+ G+ LE
Sbjct: 120 KICLV---ASKLGRPVYKKYGFQDTDEWLEL 147
>1p0h_A Hypothetical protein RV0819; GNAT fold, acetyltransferase, coenzyme
A complex, MSHD, TRAN; HET: COA ACO; 1.60A
{Mycobacterium tuberculosis} SCOP: d.108.1.1 PDB:
1ozp_A* 2c27_A*
Length = 318
Score = 57.1 bits (137), Expect = 2e-10
Identities = 25/117 (21%), Positives = 38/117 (32%), Gaps = 16/117 (13%)
Query: 40 PEYFQVAESPT-----GEIMGYIMGKAEGHGDKWHGHVTALTVAPDYRRLGIAAELMSWL 94
P+ +A + G ++G+ K G V L V P +R G+ L S
Sbjct: 202 PDGLILAFGDSPRERPGRLLGFHWTKVHPDHP-GLGEVYVLGVDPAAQRRGLGQMLTSIG 260
Query: 95 ----------EDISEKKRAYFVDLFVRVSNTVAITMYKRLGYIVYRTVLEYYSGSPD 141
+ V L+V N A+ Y+ LG+ Y Y D
Sbjct: 261 IVSLARRLGGRKTLDPAVEPAVLLYVESDNVAAVRTYQSLGFTTYSVDTAYALAGTD 317
Score = 39.0 bits (90), Expect = 4e-04
Identities = 18/112 (16%), Positives = 32/112 (28%), Gaps = 7/112 (6%)
Query: 40 PEYFQVAESPTGEIMGYIMGKAEGHGDKWHGHVTALTVAPDYRRLGIAAELMSWLEDISE 99
P G I+GY+ G + L V P RR GI + +
Sbjct: 51 EHLLVAGSRPGGPIIGYLNL---SPPRGAGGAMAELVVHPQSRRRGIGTAMARAALAKTA 107
Query: 100 KKRAYFVDLFVRVSNTVAITMYKRLGYIVYRTVLEYYSGSPDEDAYDMRKAL 151
+ + + A LG + R +++ D + +
Sbjct: 108 GR----NQFWAHGTLDPARATASALGLVGVRELIQMRRPLRDIPEPTIPDGV 155
>1i12_A Glucosamine-phosphate N-acetyltransferase; GNAT, alpha/beta; HET:
ACO; 1.30A {Saccharomyces cerevisiae} SCOP: d.108.1.1
PDB: 1i1d_A* 1i21_A
Length = 160
Score = 55.2 bits (133), Expect = 3e-10
Identities = 17/120 (14%), Positives = 36/120 (30%), Gaps = 6/120 (5%)
Query: 20 LDPLTETYGLSFYMQYLAHWPEYFQVAESPTGEIMGY---IMGKAEGHGDKWHGHVTALT 76
+ E + + + T + I+ + H GH+ +
Sbjct: 43 IKYWNEATVWNDNEDKKIMQYNPMVIVDKRTETVAATGNIIIERKIIHELGLCGHIEDIA 102
Query: 77 VAPDYRRLGIAAELMSWLEDISEKKRAYFVDLFVRVSNTVAITMYKRLGYIVYRTVLEYY 136
V Y+ G+ L+ L I Y + L N + Y++ G+ ++
Sbjct: 103 VNSKYQGQGLGKLLIDQLVTIGFDYGCYKIILDCDEKN---VKFYEKCGFSNAGVEMQIR 159
>2ft0_A TDP-fucosamine acetyltransferase; GNAT fold acetyltransferase,
structural genomics, montreal-K bacterial structural
genomics initiative, BSGI; HET: ACO; 1.66A {Escherichia
coli} PDB: 2fs5_A*
Length = 235
Score = 56.2 bits (135), Expect = 3e-10
Identities = 22/127 (17%), Positives = 39/127 (30%), Gaps = 9/127 (7%)
Query: 10 DDMFKFNNVNLDPLTETYGLSFYMQYLAHWPEYFQVAESPTGEIMGYIMGKAEGHGDKWH 69
F+ D Y + + + +G+I GY+ + D
Sbjct: 117 QSRFRAPWYAPDASGRFYAQWIENAVRGTFDHQCLILRAASGDIRGYVSLRELNATDARI 176
Query: 70 GHVTALTVAPDYRRLGIAAELMSWLEDISEKKRAYFVDLFVRVSNTVAITMYKRLGYIVY 129
G G AELM + + + + + ++ NT A+ Y + G V
Sbjct: 177 GL---------LAGRGAGAELMQTALNWAYARGKTTLRVATQMGNTAALKRYIQSGANVE 227
Query: 130 RTVLEYY 136
T Y
Sbjct: 228 STAYWLY 234
>4e0a_A BH1408 protein; structural genomics, PSI-biology, protein structure
initiati northeast structural genomics consortium, NESG,
transferase; 1.80A {Bacillus halodurans} PDB: 4f6a_A*
Length = 164
Score = 54.7 bits (132), Expect = 4e-10
Identities = 16/100 (16%), Positives = 30/100 (30%), Gaps = 6/100 (6%)
Query: 42 YFQVAESPTGEIMGYIMGKAEGHG------DKWHGHVTALTVAPDYRRLGIAAELMSWLE 95
V +I Y + + +++ L V R GI + +
Sbjct: 55 TVLVFVDEREKIGAYSVIHLVQTPLLPTMQQRKTVYISDLCVDETRRGGGIGRLIFEAII 114
Query: 96 DISEKKRAYFVDLFVRVSNTVAITMYKRLGYIVYRTVLEY 135
+ + ++L V N A Y LG + +E
Sbjct: 115 SYGKAHQVDAIELDVYDFNDRAKAFYHSLGMRCQKQTMEL 154
>3dsb_A Putative acetyltransferase; APC60368.2, ST genomics, PSI-2, protein
structure initiative, midwest CENT structural genomics,
MCSG; HET: MSE; 1.48A {Clostridium difficile}
Length = 157
Score = 54.1 bits (130), Expect = 6e-10
Identities = 20/111 (18%), Positives = 39/111 (35%), Gaps = 9/111 (8%)
Query: 22 PLTETYGLSFYMQYLAHWPE-YFQVAESPTGEIMGYIMGKAEGHGDKWHG----HVTALT 76
L L + + V +++ IM W + ++
Sbjct: 35 ELDMDVLTKGVKALLLDERKGKYHVYTVF-DKVVAQIM--YTYEWSDWRNGNFLWIQSVY 91
Query: 77 VAPDYRRLGIAAELMSWLEDI-SEKKRAYFVDLFVRVSNTVAITMYKRLGY 126
V +YRR GI L +++++I + + + L+V N A Y+ L
Sbjct: 92 VDKEYRRKGIFNYLFNYIKNICDKDENIVGMRLYVEKENINAKATYESLNM 142
>3ey5_A Acetyltransferase-like, GNAT family; structural genomics, APC60148,
GNAT famil protein structure initiative; 2.15A
{Bacteroides thetaiotaomicron}
Length = 181
Score = 54.2 bits (130), Expect = 8e-10
Identities = 19/127 (14%), Positives = 34/127 (26%), Gaps = 4/127 (3%)
Query: 22 PLTETYGLSFYMQYLAHWPEYFQVAESPTGEIMGYIMGKAEGHGDKWHGHVTALTVAPDY 81
P E L +Y + +G+I +V P
Sbjct: 30 PPEEYRELEHLREYTDRIGNFHNNIIFDDDLPIGFITYWDFDE----FYYVEHFATNPAL 85
Query: 82 RRLGIAAELMSWLEDISEKKRAYFVDLFVRVSNTVAITMYKRLGYIVYRTVLEYYSGSPD 141
R G + L + ++ V+ V I Y+R G+ ++
Sbjct: 86 RNGGYGKRTLEHLCEFLKRPIVLEVERPVEEMAKRRINFYQRHGFTLWEKDYYQPPYKEG 145
Query: 142 EDAYDMR 148
+D M
Sbjct: 146 DDFLPMY 152
>2g3a_A Acetyltransferase; structural genomics, PSI, protein structu
initiative, midwest center for structural genomics,
MCSG; 1.90A {Agrobacterium tumefaciens str} SCOP:
d.108.1.1
Length = 152
Score = 53.8 bits (129), Expect = 9e-10
Identities = 18/112 (16%), Positives = 39/112 (34%), Gaps = 9/112 (8%)
Query: 40 PEYFQVAESPTGEIMGYIMGKAEGHGDKWHGHVTALTVAPDYRRLGIAAELMSWLEDISE 99
+ + + G ++G +V L V R GIA +L++ E+ +
Sbjct: 50 RDLNITIRNDDNSVTGGLVGHTARG----WLYVQLLFVPEAMRGQGIAPKLLAMAEEEAR 105
Query: 100 KKRAYFVDLFVRVSNTVAITMYKRLGYIVYRTVLEYYSGSPDEDAYDMRKAL 151
K+ ++ N A+ Y+R G+ ++ + + K
Sbjct: 106 KRGCMG--AYIDTMNPDALRTYERYGFTKIGSLGPLS---SGQSITWLEKRF 152
>2cy2_A TTHA1209, probable acetyltransferase; structural genomics, unknown
function, NPPSFA; HET: ACO; 2.00A {Thermus thermophilus}
SCOP: d.108.1.1 PDB: 1wk4_A*
Length = 174
Score = 54.0 bits (130), Expect = 1e-09
Identities = 25/128 (19%), Positives = 50/128 (39%), Gaps = 4/128 (3%)
Query: 20 LDPLTETYGLSFYMQYLAH--WPEYFQVAESPTGEIMGYIMGKAEGHGD--KWHGHVTAL 75
L+ L+ + Q L WP VAES +GE++G+ + + + A+
Sbjct: 35 LEGLSYEGQAERWAQRLKTPTWPGRLFVAESESGEVVGFAAFGPDRASGFPGYTAELWAI 94
Query: 76 TVAPDYRRLGIAAELMSWLEDISEKKRAYFVDLFVRVSNTVAITMYKRLGYIVYRTVLEY 135
V P ++R G+ L + + + + ++V N Y+ LG ++
Sbjct: 95 YVLPTWQRKGLGRALFHEGARLLQAEGYGRMLVWVLKENPKGRGFYEHLGGVLLGEREIE 154
Query: 136 YSGSPDED 143
G+ +
Sbjct: 155 LGGAKLWE 162
>2i79_A Acetyltransferase, GNAT family; acetyl coenzyme *A, structur
genomics, PSI-2, protein structure initiative; HET: ACO;
2.10A {Streptococcus pneumoniae}
Length = 172
Score = 53.9 bits (130), Expect = 1e-09
Identities = 26/166 (15%), Positives = 53/166 (31%), Gaps = 17/166 (10%)
Query: 3 TLRAFTCDDMFKFNNVNLDPLTETYGLSFYMQYLAHWPE-----YFQVAESPT------- 50
+R D + ET S + E + A S
Sbjct: 6 LIREAEPKDAAELVAFLNRVSLETDFTSLDGDGILLTSEEMEIFLNKQASSDNQITLLAF 65
Query: 51 --GEIMGYIMGKAEGHGDKWHGHVTALTVAPDYRRLGIAAELMSWLEDISEKKRAYF-VD 107
G+I G + A+ H + + Y G+ + L+ + ++ +
Sbjct: 66 LNGKIAGIVNITADQRKRVRHIGDLFIVIGKRYWNNGLGSLLLEEAIEWAQASGILRRLQ 125
Query: 108 LFVRVSNTVAITMYKRLGYIVYRTVLEYYSGSPDE--DAYDMRKAL 151
L V+ N A+ +Y++ G+++ + + D Y M K +
Sbjct: 126 LTVQTRNQAAVHLYQKHGFVIEGSQERGAYIEEGKFIDVYLMGKLI 171
>3fix_A N-acetyltransferase; termoplasma acidophilum, structural GEN PSI-2,
protein structure initiative, midwest center for STR
genomics, MCSG; 2.30A {Thermoplasma acidophilum} PDB:
3f0a_A* 3k9u_A* 3ne7_A*
Length = 183
Score = 53.2 bits (128), Expect = 2e-09
Identities = 24/113 (21%), Positives = 42/113 (37%), Gaps = 14/113 (12%)
Query: 37 AHWPEYFQVAESPTGEIMGYIMGKAEGHGDKWHGHVTALTVAPDYRRLGIAAELMSWLED 96
++ F A + ++G+I K + + L + P+Y I L+ E
Sbjct: 83 SNLDILFLGAFA-DSTLIGFIELKIIAN----KAELLRLYLKPEYTHKKIGKTLLLEAEK 137
Query: 97 ISEKKRAYFVDLFVRVSNTVAITMYKRLGYIVYRTVLEYYSGSPDEDAYDMRK 149
I +KK L+V N+V + Y + G+ V T + M K
Sbjct: 138 IMKKKGILECRLYVHRQNSVGFSFYYKNGFKVEDTD---------GSDFIMEK 181
>2fiw_A GCN5-related N-acetyltransferase:aminotransferase II;
alpha-beta-alpha sandwich, GCN4-related
acetyltransferase, S genomics, PSI; HET: ACO; 2.35A
{Rhodopseudomonas palustris} SCOP: d.108.1.1
Length = 172
Score = 52.9 bits (127), Expect = 2e-09
Identities = 23/112 (20%), Positives = 40/112 (35%), Gaps = 12/112 (10%)
Query: 41 EYFQVAESPTGEIMGYIMGKAEGHGDKWHGHVTALTVAPDYRRLGIAAELMSWLEDISEK 100
+ +A G +G+ K H + L V PDY + L+ LE
Sbjct: 62 QLTLIATLQ-GVPVGFASLKGPDH-------IDMLYVHPDYVGRDVGTTLIDALEK--LA 111
Query: 101 KRAYFVDLFVRVSNTVAITMYKRLGYIVYRTVLEYYSGSPDEDAYDMRKALS 152
+ L V S+ A + + GY+ + +G + M K+L+
Sbjct: 112 GARGALILTVDASDN-AAEFFAKRGYVAKQRNTVSINGEWLAN-TTMTKSLA 161
>2r1i_A GCN5-related N-acetyltransferase; YP_831484.1, putative
acetyltransferase, arthrobacter SP. FB acetyltransferase
(GNAT) family; HET: MSE; 1.65A {Arthrobacter SP}
Length = 172
Score = 51.7 bits (124), Expect = 6e-09
Identities = 16/111 (14%), Positives = 34/111 (30%), Gaps = 10/111 (9%)
Query: 21 DPLTETYGLSFYMQYLAHWPEYFQVAESPTGEIMGYIM-----GKAEGHGDKWHGHVTAL 75
P T L+ + +L + V G + + L
Sbjct: 49 APTPGTDELASRLSHLLAGEDVV-VLL-AGEPPTGLAVLSFRPNVWYP---GPVAILDEL 103
Query: 76 TVAPDYRRLGIAAELMSWLEDISEKKRAYFVDLFVRVSNTVAITMYKRLGY 126
V P R + + L++ + + +++ V +T A Y+ G+
Sbjct: 104 YVRPGRRGHRLGSALLAASCGLVRSRGGALLEINVDGEDTDARRFYEARGF 154
>3frm_A Uncharacterized conserved protein; APC61048, staphylococcus
epidermidis ATCC structural genomics, PSI-2, protein
structure initiative; HET: MES; 2.32A {Staphylococcus
epidermidis}
Length = 254
Score = 51.9 bits (124), Expect = 1e-08
Identities = 12/77 (15%), Positives = 30/77 (38%), Gaps = 8/77 (10%)
Query: 51 GEIMGYIMGKAEGHGDKWHGHVTALTVAPDYRRLGIAAELMSWLEDISEKKRAYFVDLFV 110
+ +G + + V +++ GI +E+ +++ ++ ++ + V
Sbjct: 173 HQPVGIVDIIMTDK----TIEIDGFGVLEEFQHQGIGSEIQAYVGRMANERPV----ILV 224
Query: 111 RVSNTVAITMYKRLGYI 127
A MY R GY+
Sbjct: 225 ADGKDTAKDMYLRQGYV 241
>3g8w_A Lactococcal prophage PS3 protein 05; APC61042, acetyltransferase,
staphylococcus epidermidis ATCC structural genomics;
HET: NHE FLC; 2.70A {Staphylococcus epidermidis atcc
12228}
Length = 169
Score = 50.6 bits (121), Expect = 2e-08
Identities = 16/143 (11%), Positives = 44/143 (30%), Gaps = 19/143 (13%)
Query: 1 MTTLRAFTCDDMFKFNNVNLDPLTETYGLSFYMQYLAHWP-EYFQVAESPT--------- 50
M +R +D+ + + + YL + + + S
Sbjct: 4 MNNIRLLNQNDLDSYIELMKFGHHNY---EWDRYYLENVSIDRLKTILSNHTDYWNIFGA 60
Query: 51 ---GEIMGYIMGKAEGHGDKWH-GHVTALTVAPDYRRLGIAAELMSWLEDISEKKRAYFV 106
E++ K + K H + V + EL++ + ++++ +
Sbjct: 61 FEDDELVATCTLKQMNYVGKCHKAILENNFV--KNNDEIVNRELINHIIQYAKEQNIETL 118
Query: 107 DLFVRVSNTVAITMYKRLGYIVY 129
+ + +N A + +G+
Sbjct: 119 MIAIASNNISAKVFFSSIGFENL 141
>2eui_A Probable acetyltransferase; dimer, structural genomics, PSI,
protein structure initiative; 2.80A {Pseudomonas
aeruginosa PAO1} SCOP: d.108.1.1
Length = 153
Score = 50.1 bits (120), Expect = 2e-08
Identities = 15/99 (15%), Positives = 35/99 (35%), Gaps = 2/99 (2%)
Query: 40 PEYFQVAESPTGEIMGYIMGKAEGHGDKWH--GHVTALTVAPDYRRLGIAAELMSWLEDI 97
+ ++G+ + + VA + RR +A L+ + +
Sbjct: 47 SVIYLALADEEDRLLGFCQLYPSFSSLSLKRVWILNDIYVAEEARRQLVADHLLQHAKQM 106
Query: 98 SEKKRAYFVDLFVRVSNTVAITMYKRLGYIVYRTVLEYY 136
+ + A + + V N VA +Y+ +G+ + Y
Sbjct: 107 ARETHAVRMRVSTSVDNEVAQKVYESIGFREDQEFKNYT 145
>3ddd_A Putative acetyltransferase; NP_142035.1, structural genomi center
for structural genomics, JCSG, protein structure INI
PSI-2; HET: COA; 2.25A {Pyrococcus horikoshii}
Length = 288
Score = 51.5 bits (123), Expect = 2e-08
Identities = 19/122 (15%), Positives = 41/122 (33%), Gaps = 9/122 (7%)
Query: 35 YLAHWPEYFQVAESPTGEIMGYIMGKAEGHGDKWHGHVTALTVAPDYRRLGIAAELMSWL 94
L P+ +A E +G + + V Y+R GI E+ L
Sbjct: 57 SLEVQPDGCLLAF-LKDEPVGMGCIFFYNK----QAWIGLMGVKKAYQRRGIGTEVFRRL 111
Query: 95 EDISEKKRAYFVDLFVRVSNTVAITMYKRLGYIVYRTVLEYYSGSPDEDAYDMRKALSRD 154
+I +K VD +++ +YK+ ++ + Y + +++
Sbjct: 112 LEIGRRK----VDTIRLDASSQGYGLYKKFKFVDEYRTVRYELMERPIKRVEGVVEVNKI 167
Query: 155 VH 156
+
Sbjct: 168 PN 169
>3f8k_A Protein acetyltransferase; GCN5-related N-acetyltransferase; HET:
COA; 1.84A {Sulfolobus solfataricus P2}
Length = 160
Score = 49.2 bits (118), Expect = 4e-08
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 8/75 (10%)
Query: 74 ALTVAPDYRRLGIAAELMSWLEDISEKKRAYFVDLFVRVSNTVAITMYKRLGYIVYRTVL 133
+L V +YR LGI L+ L + ++K V + NT I + ++LG+ +
Sbjct: 78 SLVVHRNYRTLGIGTLLVKTLIEEAKKSGLSTVKFYTLPENTPMIKIGRKLGFKM----- 132
Query: 134 EYYSGSPDEDAYDMR 148
DE +MR
Sbjct: 133 ---RFYEDEVYGEMR 144
>2vi7_A Acetyltransferase PA1377; GNAT, GCN5 family, N-acetyltransferase,
hypothetical protein; 2.25A {Pseudomonas aeruginosa}
Length = 177
Score = 48.9 bits (117), Expect = 6e-08
Identities = 26/144 (18%), Positives = 51/144 (35%), Gaps = 25/144 (17%)
Query: 3 TLRAFTCDD---MFKFNNVNLDPLTETYGLSFYMQYLAHWPEYFQ-----------VAES 48
L ++ + N DP L Q + + VA
Sbjct: 9 RLERYSERHVEGLTALYN---DPAVARQVLQMPYQSVEQRRKRLHDSADDDRLLILVALH 65
Query: 49 PTGEIMGYIMGKAEGHGDKWHGHVTALTVAPDYRRLGIAAELMSWLEDISEK----KRAY 104
G+++G + + H + VA ++ G+ + L+ L DI++ +R
Sbjct: 66 -QGDVIGSASLEQHPRIRRSHSGSIGMGVAVAWQGKGVGSRLLGELLDIADNWMNLRR-- 122
Query: 105 FVDLFVRVSNTVAITMYKRLGYIV 128
V+L V N A+ +Y++ G+
Sbjct: 123 -VELTVYTDNAPALALYRKFGFET 145
>3tt2_A GCN5-related N-acetyltransferase; structural genomics, PSI-biology,
midwest center for structu genomics, MCSG, alpha-beta
sandwich; HET: MES; 2.73A {Sphaerobacter thermophilus}
Length = 330
Score = 49.8 bits (118), Expect = 8e-08
Identities = 21/101 (20%), Positives = 42/101 (41%), Gaps = 5/101 (4%)
Query: 37 AHWPEYFQVAESPTGEIMGYIMGKAEGHGDKWHGHVTALTVAPDYRRLGIAAELMSWLED 96
+ E+ +G I+G +G+ G + ++ V +R GIA L+ +
Sbjct: 218 KDPELWLLAVETDSGHIVGTCLGQETAG----KGWIGSVGVRRPWRGRGIALALLQEVFG 273
Query: 97 ISEKKRAYFVDLFVRVSN-TVAITMYKRLGYIVYRTVLEYY 136
+ ++ V+L V + T A +Y+R G V + +
Sbjct: 274 VYYRRGVREVELSVDAESRTGAPRLYRRAGMHVKHRYVLHR 314
Score = 37.1 bits (85), Expect = 0.002
Identities = 20/101 (19%), Positives = 40/101 (39%), Gaps = 11/101 (10%)
Query: 37 AHWPEYFQVAESPTGEIMGYIMGKAEGHGDKWHGHVTALTVAPDYRRLGIAAELMSWLED 96
+ + +P GE Y A+ ++ V P +R +G+ L+ W E+
Sbjct: 55 LDLGQEAVLVVAPDGEAAAY----ADVLNRRYVQLSVYGYVHPRFRGMGLGTWLVQWGEE 110
Query: 97 ISEKKRA-------YFVDLFVRVSNTVAITMYKRLGYIVYR 130
+ + V ++R S+T A+ + ++ GY R
Sbjct: 111 WIQDRMHLAPAEAQVTVQHYIRASSTSALRLMEQHGYRPVR 151
>3qb8_A A654L protein; GNAT N-acetyltransferase, acetyltransferase, COA,
spermine, spermidine, transferase; HET: COA; 1.50A
{Paramecium bursaria chlorella virus 1}
Length = 197
Score = 48.8 bits (116), Expect = 8e-08
Identities = 15/105 (14%), Positives = 34/105 (32%), Gaps = 6/105 (5%)
Query: 39 WPEYFQVAESPTGEIMGYIMGKAEGHGDKWHGHVTALTVAPDYRRLGIAAELMSWLEDIS 98
+ T + D +V A + + G+A +L+ + S
Sbjct: 79 YENMHYGNIRETDPMFDLFGNLDSYTPDDKCLYVFA--IGSEVTGKGLATKLLKKTIEES 136
Query: 99 EKKRAYFVDLFVRVSNTVAITMYKRLGYIVYRTVLEYYSGSPDED 143
F ++ +N ++ M+++ G+ +V Y G
Sbjct: 137 --SSHGFKYIYGDCTNIISQNMFEKHGFETVGSV--KYKGYQYGI 177
>3s6f_A Hypothetical acetyltransferase; acyl-COA N-acyltransferases,
structural genomics, joint CENT structural genomics,
JCSG; HET: MSE COA; 1.19A {Deinococcus radiodurans}
Length = 145
Score = 47.9 bits (114), Expect = 1e-07
Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 11/103 (10%)
Query: 42 YFQVAESPTGEIMGYIMGKAEGHGDKWHGHVTALTVAPDYRRLGIAAELMSWLEDISEKK 101
F +A +P G+++G++ ++G + L V +R LG+ +ELM + E
Sbjct: 49 VFVLARTPDGQVIGFVNALSDGI---LAASIPLLEVQAGWRSLGLGSELMRRVLT--ELG 103
Query: 102 RAYFVDLFVRVSNTVAITMYKRLGYIVYRTVLEYYSGSPDEDA 144
Y VDL + + Y+RLG + + D A
Sbjct: 104 DLYMVDLS---CDDDVVPFYERLG---LKRANAMFLRRYDNQA 140
>3i3g_A N-acetyltransferase; malaria, structural genomics, structural
genomics consortium, SGC,; 1.86A {Trypanosoma brucei}
PDB: 3fb3_A
Length = 161
Score = 47.8 bits (114), Expect = 1e-07
Identities = 27/119 (22%), Positives = 45/119 (37%), Gaps = 6/119 (5%)
Query: 21 DPLTETYGLSFYMQYLAHWPEYFQVAESPTGEIMGYIMGKAE---GHGDKWHGHVTALTV 77
PL+ + PTG I+G + G + GH+ + V
Sbjct: 45 PPLSGVELANIADMRRRAGIVTKVFCHQPTGRIVGSASLMIQPKFTRGGRAVGHIEDVVV 104
Query: 78 APDYRRLGIAAELMSWLEDISEKKRAYFVDLFVRVSNTVAITMYKRLGYIVYRTVLEYY 136
P YR G+ L+ L +IS K Y V L S+ ++ Y++LG+ + +
Sbjct: 105 DPSYRGAGLGKALIMDLCEISRSKGCYKVILD---SSEKSLPFYEKLGFRAHERQMRLD 160
>3exn_A Probable acetyltransferase; GCN5-related N-acetyltransferase, MCSG,
P structural genomics, protein structure initiative;
HET: ACO; 1.80A {Thermus thermophilus}
Length = 160
Score = 47.8 bits (114), Expect = 1e-07
Identities = 14/89 (15%), Positives = 32/89 (35%), Gaps = 6/89 (6%)
Query: 51 GEIMGYIMGKAEGHGDKWHGHVTALTVAPDYRRLGIAAELMSWLEDISEKKRAYFVDLFV 110
E +GY + G+ + ++ L + D++ G+ + + + R + V
Sbjct: 71 QEPVGY-LDAKLGYPEAEDATLSLLLIREDHQGRGLGRQALERFAAGLDGVRR--LYAVV 127
Query: 111 RVSNTVAITMYKRLGYIVY---RTVLEYY 136
N A ++ G+ L +Y
Sbjct: 128 YGHNPKAKAFFQAQGFRYVKDGGPTLTWY 156
>3fnc_A Protein LIN0611, putative acetyltransferase; GNAT, RIMI, structural
PSI-2, protein structure initiative, midwest center for
STR genomics, MCSG; 1.75A {Listeria innocua}
Length = 163
Score = 47.7 bits (114), Expect = 2e-07
Identities = 24/121 (19%), Positives = 43/121 (35%), Gaps = 8/121 (6%)
Query: 23 LTETYGLSFYMQYLAHWPEYFQVAESPTGEIMGYIMGKAEGHGDKWHGHVTALTVAPDYR 82
L Y + ++ P F V E +++G+ G + A + P+
Sbjct: 44 LKRFYNVETLHNRISATP--FAVLEQ-ADKVIGFANFIELEKGK---SELAAFYLLPEVT 97
Query: 83 RLGIAAELMSWLEDISEKKRAYFVDLFVRVSNTVAITMYKRLGYIVYRTVLEYYSGSPDE 142
+ G+ EL+ + + + V N AI YK G++ E + G P E
Sbjct: 98 QRGLGTELLEVGMTLFHVPLP--MFVNVEKGNETAIHFYKAKGFVQVEEFTEDFYGYPLE 155
Query: 143 D 143
Sbjct: 156 T 156
>2oh1_A Acetyltransferase, GNAT family; YP_013287.1, structural genom joint
center for structural genomics, JCSG, protein structu
initiative; HET: MSE UNL; 1.46A {Listeria monocytogenes
str}
Length = 179
Score = 47.5 bits (113), Expect = 2e-07
Identities = 15/102 (14%), Positives = 38/102 (37%), Gaps = 10/102 (9%)
Query: 45 VAESPTGEIMGYIMG-------KAEGHGDKWHG---HVTALTVAPDYRRLGIAAELMSWL 94
+ E+ G + G ++ + D ++ + V+ + + ++ +++ +
Sbjct: 69 LFETEAGALAGAMIIRKTPSDWDTDLWEDLAIDKAYYLHRIMVSRAFSGISLSKQMIYFA 128
Query: 95 EDISEKKRAYFVDLFVRVSNTVAITMYKRLGYIVYRTVLEYY 136
E + + F+ L SN MY R G+ +Y
Sbjct: 129 EKLGIEMSVPFIRLDCIESNETLNQMYVRYGFQFSGKKNGFY 170
>2qec_A Histone acetyltransferase HPA2 and related acetyltransferases;
NP_600742.1, acetyltransferase (GNAT) family; 1.90A
{Corynebacterium glutamicum atcc 13032}
Length = 204
Score = 47.7 bits (113), Expect = 2e-07
Identities = 19/117 (16%), Positives = 41/117 (35%), Gaps = 8/117 (6%)
Query: 33 MQYLAHWPEYFQVAESPTGEIMGYIMGKAEGHGDKWHGHVTALTVAPDYRRLGIAAELMS 92
A P + ++ + A H H ++ + + R G+ + L++
Sbjct: 89 KDQAAMLPRLVSIFGIKAAQVAWTDLSSARFHPKFPHWYLYTVATSSSARGTGVGSALLN 148
Query: 93 WLEDISEKKRAYFVDLFVRVSNTVAITMYKRLGYIVYRTVLEYYSGSPDEDAYDMRK 149
+ + Y + ++T A +Y RLG++ + G+P M K
Sbjct: 149 HGIARAGDEAIY-----LEATSTRAAQLYNRLGFVPLGYIPSDDDGTP---ELAMWK 197
>1n71_A AAC(6')-II; aminoglycoside 6'-N-acetyltransferase, antibiotic
resistance, coenzyme A; HET: COA; 1.80A {Enterococcus
faecium} SCOP: d.108.1.1 PDB: 2a4n_A* 1b87_A*
Length = 180
Score = 47.1 bits (111), Expect = 4e-07
Identities = 24/139 (17%), Positives = 42/139 (30%), Gaps = 29/139 (20%)
Query: 40 PEYFQVAESPTGEIMGYIMGKAEGHGDKWHGHVTALTVAPDYRRLGIAAELMSWLEDISE 99
PE VA E++G+I + W H L V R+ I L+++LE
Sbjct: 43 PERIAVAAVDQDELVGFIGAIPQYGITGWELH--PLVVESSRRKNQIGTRLVNYLEKEVA 100
Query: 100 KKRAYFVDL-------------------------FVRVSNTVAITMYKRLGYIVYRTVLE 134
+ + L ++ Y++LGY + +
Sbjct: 101 SRGGITIYLGTDDLDHGTTLSQTDLYEHTFDKVASIQNLREHPYEFYEKLGYKIVGVLPN 160
Query: 135 YYSGSPDEDAYDMRKALSR 153
D+ M K +
Sbjct: 161 AN--GWDKPDIWMAKTIIP 177
>3gy9_A GCN5-related N-acetyltransferase; YP_001815201.1, putative
acetyltransferase; HET: MSE COA SO4; 1.52A
{Exiguobacterium sibiricum 255-15} PDB: 3gya_A*
Length = 150
Score = 46.1 bits (109), Expect = 5e-07
Identities = 17/87 (19%), Positives = 30/87 (34%), Gaps = 6/87 (6%)
Query: 40 PEYFQVAESPTGEIMGYIMGKAEGHGDKWHGHVTALTVAPDYRRLGIAAELMSWLEDISE 99
E VA S + G + G G + + V P+ R GI L+ + +
Sbjct: 48 GEAMFVALST-TNQVLACGGYMKQSGQARTGRIRHVYVLPEARSHGIGTALLEKIMSEAF 106
Query: 100 KKRAYFVDLFVRVSNTVAITMYKRLGY 126
+ + + A Y+ LG+
Sbjct: 107 LTYD-----RLVLYSEQADPFYQGLGF 128
>2atr_A Acetyltransferase, GNAT family; MCSG, structural genomics, PSI,
protein structure INIT midwest center for structural
genomics; 2.01A {Streptococcus pneumoniae} SCOP:
d.108.1.1
Length = 138
Score = 45.3 bits (107), Expect = 1e-06
Identities = 15/76 (19%), Positives = 27/76 (35%), Gaps = 6/76 (7%)
Query: 51 GEIMGYIMGKAEGHGDKWHGHVTALTVAPDYRRLGIAAELMSWLEDISEKKRAYFVDLFV 110
++G I +G V L V P Y+R GI + LM ++ +
Sbjct: 51 DAVVGLIRLVGDGF---SSVFVQDLIVLPSYQRQGIGSSLMKEALGNFKEAYQVQLATE- 106
Query: 111 RVSNTVAITMYKRLGY 126
+ Y+ +G+
Sbjct: 107 --ETEKNVGFYRSMGF 120
>2fl4_A Spermine/spermidine acetyltransferase; structural genomics, protein
structure initiative, midwest center for structural
genomics, MCSG; 1.60A {Enterococcus faecalis} SCOP:
d.108.1.1
Length = 149
Score = 44.7 bits (106), Expect = 2e-06
Identities = 22/131 (16%), Positives = 50/131 (38%), Gaps = 7/131 (5%)
Query: 1 MT-TLRAFTCDDMFKFNNVNLDPLTETY--GLSFYMQYLAHWPEYFQVAESPTGEIMGYI 57
M T D+ N+ + + + ++ ++ +PE+ +++GY
Sbjct: 2 MEIHFEKVTSDNRKAVENLQVFAEQQAFIESMAENLKESDQFPEWESAGIYDGNQLIGYA 61
Query: 58 MGKAEGHGDKWHGHVTALTVAPDYRRLGIAAELMSWLED-ISEKKRAYFVDLFVRVSNTV 116
M G + + ++ G L + EK + + L V +N+
Sbjct: 62 MY---GRWQDGRVWLDRFLIDQRFQGQGYGKAACRLLMLKLIEKYQTNKLYLSVYDTNSS 118
Query: 117 AITMYKRLGYI 127
AI +Y++LG++
Sbjct: 119 AIRLYQQLGFV 129
>2bei_A Diamine acetyltransferase 2; SSAT2, BC011751, AAH11751, thialysine
N-acetyltransferase, structural genomics, protein
structure initiative, PSI; HET: ACO; 1.84A {Homo
sapiens} SCOP: d.108.1.1 PDB: 2q4v_A*
Length = 170
Score = 45.0 bits (106), Expect = 2e-06
Identities = 15/58 (25%), Positives = 29/58 (50%)
Query: 68 WHGHVTALTVAPDYRRLGIAAELMSWLEDISEKKRAYFVDLFVRVSNTVAITMYKRLG 125
++ + V P+YR GI ++++ + +++ K L V N A+ +YK LG
Sbjct: 87 RTIYLEDIYVMPEYRGQGIGSKIIKKVAEVALDKGCSQFRLAVLDWNQRAMDLYKALG 144
>3lod_A Putative acyl-COA N-acyltransferase; structural genomics, PSI2,
MCSG, structure initiative; 2.50A {Klebsiella pneumoniae
subsp}
Length = 162
Score = 44.6 bits (106), Expect = 2e-06
Identities = 24/104 (23%), Positives = 46/104 (44%), Gaps = 8/104 (7%)
Query: 59 GKAEGHG-----DKWHGHVTALTVAPDYRRLGIAAELMSWLEDISEKKRAYFVDLFVRVS 113
G+A G G ++ G + + + P +R + +L++ LE + ++ + + L +
Sbjct: 59 GEAVGCGAIVLSEEGFGEMKRVYIDPQHRGQQLGEKLLAALEAKARQRDCHTLRLETGIH 118
Query: 114 NTVAITMYKRLGYIVYRTVLEYYSGSPDEDAYDMRKALSRDVHG 157
AI +Y R G Y+T + PD + M K L D+
Sbjct: 119 QHAAIALYTRNG---YQTRCAFAPYQPDPLSVFMEKPLFADLRS 159
>1m4i_A Aminoglycoside 2'-N-acetyltransferase; COA binding motif; HET: COA
KAN PAP; 1.50A {Mycobacterium tuberculosis} SCOP:
d.108.1.1 PDB: 1m4d_A* 1m4g_A* 1m44_A*
Length = 181
Score = 44.6 bits (105), Expect = 3e-06
Identities = 20/142 (14%), Positives = 44/142 (30%), Gaps = 13/142 (9%)
Query: 23 LTETYGLSFYMQYLAHWPEYFQVAESPTGEIMGYIM--GKAEGHGDKWH--GHVTALTVA 78
+T + F H G I+ + + + G+V + V
Sbjct: 28 VTGAFAGDFTETDWEHTLGGMHALIWHHGAIIAHAAVIQRRLIYRGNALRCGYVEGVAVR 87
Query: 79 PDYRRLGIAAELMSWLEDISEKKRAYFVDLFVRVSNTVAITMYKRLGYIVYRTVLEYYSG 138
D+R + + L+ +E + L S+ A +Y G++ + +
Sbjct: 88 ADWRGQRLVSALLDAVEQVMRGA----YQLGALSSSARARRLYASRGWLPWHGPTSVLAP 143
Query: 139 -----SPDEDAYDMRKALSRDV 155
+PD+D + +
Sbjct: 144 TGPVRTPDDDGTVFVLPIDISL 165
>1qsm_A HPA2 histone acetyltransferase; protein-acetyl coenzyme A complex;
HET: ACO; 2.40A {Saccharomyces cerevisiae} SCOP:
d.108.1.1 PDB: 1qso_A
Length = 152
Score = 43.9 bits (104), Expect = 3e-06
Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Query: 75 LTVAPDYRRLGIAAELMSWLEDISEKKRAYFVDLFVRVSNTVAITMYKRLGY----IVYR 130
L V + R G +L+ ++ D ++K V SN A +Y ++GY I+Y+
Sbjct: 89 LYVDENSRVKGAGGKLIQFVYDEADKLGTPSVYWCTDESNHRAQLLYVKVGYKAPKILYK 148
>2ree_A CURA; GNAT, S-acetyltransferase, decarboxylase, polyketid synthase,
loading, phosphopantetheine, transferase, lyase; HET:
SO4; 1.95A {Lyngbya majuscula} PDB: 2ref_A*
Length = 224
Score = 44.2 bits (104), Expect = 4e-06
Identities = 16/154 (10%), Positives = 39/154 (25%), Gaps = 21/154 (13%)
Query: 3 TLRAFTCDDMFKFNNVNLD--PLTETYGLSFYMQYLAHWPEYFQVAESPTGEIMGYIMGK 60
LR +D+ + + + P+ + E +I+G I +
Sbjct: 14 NLRHPKIEDLRDLIALETLCWSENLQVDNEEIYRRIFKIPQGQFILEL-EDKIVGAIYSQ 72
Query: 61 AEGHGDKWHGH-----------------VTALTVAPDYRRLGIAAELMSWLEDISEKKRA 103
+ + A+ + P+ + G+ L+ ++ +
Sbjct: 73 RIDNPQLLDNKTCTQVPLLHTESGVVVQLLAVNILPELQNQGLGDRLLEFMLQYCAQISG 132
Query: 104 Y-FVDLFVRVSNTVAITMYKRLGYIVYRTVLEYY 136
V N + YI +
Sbjct: 133 VEKVVAVTLCRNYPDYSPMPMAEYIHQKNESGLL 166
>2jdc_A Glyphosate N-acetyltransferase; GNAT; HET: CAO; 1.6A {Bacillus
licheniformis} SCOP: d.108.1.1 PDB: 2bsw_A* 2jdd_A*
Length = 146
Score = 43.3 bits (102), Expect = 4e-06
Identities = 18/110 (16%), Positives = 35/110 (31%), Gaps = 19/110 (17%)
Query: 51 GEIMGY---IMGKAEGHGDKWHGHVTALTVAPDYRRLGIAAELMSWLEDISEKKRAYFVD 107
G+++ + + + + YR + L+ E+I K+ A +
Sbjct: 48 GKLISIASFHQAEHSELQGQKQYQLRGMATLEGYREQKAGSSLIKHAEEILRKRGADLLW 107
Query: 108 LFVRVSNTVAITMYKRLGYIVYRTVLEYYSGSPDEDA-----YDMRKALS 152
R S A YK+LG+ G + M K ++
Sbjct: 108 CNARTS---ASGYYKKLGFSEQ--------GEVFDTPPVGPHILMYKRIT 146
>2kcw_A Uncharacterized acetyltransferase YJAB; GNAT fold, acyltransferase;
NMR {Escherichia coli}
Length = 147
Score = 43.2 bits (102), Expect = 5e-06
Identities = 21/97 (21%), Positives = 38/97 (39%), Gaps = 15/97 (15%)
Query: 34 QYLAHWPEYFQVAESPTGEIMGYIMGKAEGHGDKWHGHVTALTVAPDYRRLGIAAELMSW 93
+L P + VA + + +G+++ H+ AL + PD R G+ L+
Sbjct: 45 SFLPEAPLW--VAVNERDQPVGFMLLSG--------QHMDALFIDPDVRGCGVGRVLVEH 94
Query: 94 LEDISEKKRAYFVDLFVRVSNTVAITMYKRLGYIVYR 130
A + V N A+ YK++G+ V
Sbjct: 95 A-----LSMAPELTTNVNEQNEQAVGFYKKVGFKVTG 126
>3e0k_A Amino-acid acetyltransferase; N-acetylglutamate synthase, structu
genomics, PSI-2, protein structure initiative; HET: MSE;
2.52A {Vibrio parahaemolyticus}
Length = 150
Score = 43.2 bits (102), Expect = 6e-06
Identities = 17/92 (18%), Positives = 36/92 (39%), Gaps = 7/92 (7%)
Query: 35 YLAHWPEYFQVAESPTGEIMGYIMGKAEGHGDKWHGHVTALTVAPDYRRLGIAAELMSWL 94
L F + E G I+G + ++ + + + PDYR L++++
Sbjct: 37 QLEQEIGKFTIIEK-DGLIIGC--AALYPYSEERKAEMACVAIHPDYRDGNRGLLLLNYM 93
Query: 95 EDISEKKRAYFVDLFVRVSNTVAITMYKRLGY 126
+ S K +FV T ++ ++ G+
Sbjct: 94 KHRS--KSENINQIFVL--TTHSLHWFREQGF 121
>3d8p_A Acetyltransferase of GNAT family; NP_373092.1, structural GE joint
center for structural genomics, JCSG, protein structu
initiative; 2.20A {Staphylococcus aureus subsp}
Length = 163
Score = 43.2 bits (102), Expect = 7e-06
Identities = 21/162 (12%), Positives = 44/162 (27%), Gaps = 14/162 (8%)
Query: 1 MTTLRAFTCDDMFKFNNVNLDPLTETYGLSFYMQY---LAHWPEYFQ-------VAESPT 50
+ + + L + + L + + +A +
Sbjct: 3 AINIIEYNRSYKEELIEFILSIQKNEFNIKIDRDDQPDLENIEHNYLNSGGQFWLAINNH 62
Query: 51 GEIMGYIMGKAEGHGDKWHGHVTALTVAPDYRRLGIAAELMSWLEDISEKKRAYFVDLFV 110
I+G I + + + V YR L I +L+ + +++ + L
Sbjct: 63 QNIVGTIGLIRLDNN---MSALKKMFVDKGYRNLKIGKKLLDKVIMTCKEQNIDGIYLGT 119
Query: 111 RVSNTVAITMYKRLGYI-VYRTVLEYYSGSPDEDAYDMRKAL 151
A Y G+ + R L D D + L
Sbjct: 120 IDKFISAQYFYSNNGFREIKRGDLPSSFPKLDVDNRFYYRNL 161
>2wpx_A ORF14; transferase, acetyl transferase, antibiotic biosynthesis;
HET: ACO; 2.31A {Streptomyces clavuligerus} PDB: 2wpw_A*
Length = 339
Score = 43.6 bits (102), Expect = 9e-06
Identities = 13/93 (13%), Positives = 25/93 (26%), Gaps = 3/93 (3%)
Query: 45 VAESPTGEIMGYIMGKAEGHGDKWHGHVTALTVAPDYRRLGIAAELMSWL--EDISEKKR 102
TG + GY + V ++R + L + +
Sbjct: 240 AVHDATGALAGYTSVSKTTGNP-AYALQGMTVVHREHRGHALGTLLKLANLEYVLRHEPE 298
Query: 103 AYFVDLFVRVSNTVAITMYKRLGYIVYRTVLEY 135
V+ N I + LG+ Y + +
Sbjct: 299 VRLVETANAEDNHPMIAVNAALGFEPYDRWVFW 331
Score = 39.7 bits (92), Expect = 2e-04
Identities = 17/132 (12%), Positives = 33/132 (25%), Gaps = 9/132 (6%)
Query: 51 GEIMGYIMGKAEGHGDKWHGHVTALTVAPDYRRLGIAAELMSWLEDISEKKRAYFVDLFV 110
G ++G + V L V P RR GI L + +++ K + V
Sbjct: 68 GRVVGALR--LALPDGAPTARVDQLLVHPGRRRRGIGRALWAHARELARKHDRTTLTATV 125
Query: 111 R-------VSNTVAITMYKRLGYIVYRTVLEYYSGSPDEDAYDMRKALSRDVHGKSVIPL 163
+ +G + + + + G S++
Sbjct: 126 VESLPSGPAQDPGPAAFAAAMGAHRSDIPAGTHQWLDLDRHDPLADGVPAVPAGYSLVTW 185
Query: 164 KQAVRPEDVDNY 175
E
Sbjct: 186 GTITPDEYAVPV 197
>3owc_A Probable acetyltransferase; structural genomics, PSI-2, protein
structure initiative, MI center for structural genomics,
MCSG; HET: COA; 1.90A {Pseudomonas aeruginosa}
Length = 188
Score = 42.8 bits (101), Expect = 1e-05
Identities = 17/108 (15%), Positives = 36/108 (33%), Gaps = 3/108 (2%)
Query: 22 PLTETYGLSFYMQYLAHWPEYFQVAESPTGEIMGYIMGKAEGHGDKWHGHVTALTVAPDY 81
PL+ + P + +++G+ + + + +AP
Sbjct: 48 PLSLEQMHEDLAESRRRPPLRLLWSACRDDQVIGHC--QLLFDRRNGVVRLARIVLAPSA 105
Query: 82 RRLGIAAELMSWLEDIS-EKKRAYFVDLFVRVSNTVAITMYKRLGYIV 128
R G+ ++ L + V+L V N A +Y+R G+
Sbjct: 106 RGQGLGLPMLEALLAEAFADADIERVELNVYDWNAAARHLYRRAGFRE 153
>4fd4_A Arylalkylamine N-acetyltransferase like 5B; GNAT; 1.95A {Aedes
aegypti}
Length = 217
Score = 42.5 bits (99), Expect = 2e-05
Identities = 15/71 (21%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Query: 62 EGHGDKWHGHVTALTVAPDYRRLGIAAELMSWLEDISEKKRAYFVDLFVRVSNTVAITMY 121
+G + HV L V P YR + L+ + D+S K+ F + ++ ++ +
Sbjct: 119 GRYGLEKAYHVHILAVDPTYRGHSLGQRLLQFQMDLS--KKLGFKAISGDFTSVFSVKLA 176
Query: 122 KRLGYIVYRTV 132
++LG +
Sbjct: 177 EKLGMECISQL 187
>3te4_A GH12636P, dopamine N acetyltransferase, isoform A; dopamine/acetyl
COA, N-acetyltransferase domain; HET: ACO; 1.46A
{Drosophila melanogaster}
Length = 215
Score = 42.1 bits (98), Expect = 2e-05
Identities = 13/69 (18%), Positives = 26/69 (37%), Gaps = 2/69 (2%)
Query: 64 HGDKWHGHVTALTVAPDYRRLGIAAELMSWLEDISEKKRAYFVDLFVRVSNTVAITMYKR 123
++ L+V +YR LGIA L + + V S+ + + ++
Sbjct: 120 PDEELILDGKILSVDTNYRGLGIAGRLTERAYEYMRENGINVY--HVLCSSHYSARVMEK 177
Query: 124 LGYIVYRTV 132
LG+ +
Sbjct: 178 LGFHEVFRM 186
>4fd7_A Putative arylalkylamine N-acetyltransferase 7; GNAT, COA binding;
1.80A {Aedes aegypti}
Length = 238
Score = 42.1 bits (98), Expect = 2e-05
Identities = 15/82 (18%), Positives = 28/82 (34%), Gaps = 4/82 (4%)
Query: 62 EGHGDKWHGHVTALTVAPDYRRLGIAAELMSWLEDISEKKRAYFVDLFVRVSNTVAITMY 121
+ + + + L+V P YR GIA E++ + + + T
Sbjct: 140 DRYNVDHYLNAMGLSVDPKYRGRGIATEILRARIPLCRAVG--LKLSATCFTGPNSQTAA 197
Query: 122 KRLGYIVYRTVLEYYSGSPDED 143
R+G+ T+ Y D
Sbjct: 198 TRVGFQEDFTI--TYGELARVD 217
>2b5g_A Diamine acetyltransferase 1; structural genomics, PSI, protein
structure initiative, NEW research center for structural
genomics, nysgxrc; HET: ALY; 1.70A {Homo sapiens} SCOP:
d.108.1.1 PDB: 2b4d_A* 2jev_A* 2g3t_A 2f5i_A 2b3u_A
2b3v_A* 2b4b_A* 2b58_A* 2fxf_A* 3bj7_A* 3bj8_A*
Length = 171
Score = 41.5 bits (97), Expect = 3e-05
Identities = 16/57 (28%), Positives = 26/57 (45%)
Query: 69 HGHVTALTVAPDYRRLGIAAELMSWLEDISEKKRAYFVDLFVRVSNTVAITMYKRLG 125
++ V DYR GI +E++ L ++ + R + V N +I YKR G
Sbjct: 88 LLYLEDFFVMSDYRGFGIGSEILKNLSQVAMRCRCSSMHFLVAEWNEPSINFYKRRG 144
>2gan_A 182AA long hypothetical protein; alpha-beta protein., structural
genomics, PSI, protein struc initiative; 2.10A
{Pyrococcus horikoshii} SCOP: d.108.1.1
Length = 190
Score = 41.6 bits (97), Expect = 3e-05
Identities = 14/97 (14%), Positives = 30/97 (30%), Gaps = 13/97 (13%)
Query: 51 GEIMGYIM---GKAEGHGDKWH---------GHVTALTVAPDYRRLGIAAELMSWLEDIS 98
I+G I + + G W G + V P+++ GI + L+ +
Sbjct: 76 NRIIGTIALVYKRIKEKGIWWVPEELMNEKVGLIEFFVVDPEFQGKGIGSTLLEFAVK-R 134
Query: 99 EKKRAYFVDLFVRVSNTVAITMYKRLGYIVYRTVLEY 135
+ + + Y + G+ E+
Sbjct: 135 LRSLGKDPYVVTFPNLEAYSYYYMKKGFREIMRYKEF 171
>1y7r_A Hypothetical protein SA2161; structural genomics, protein structure
initiative, PSI, midwest center for structural genomics;
1.70A {Staphylococcus aureus} SCOP: d.108.1.1
Length = 133
Score = 40.6 bits (95), Expect = 3e-05
Identities = 14/86 (16%), Positives = 32/86 (37%), Gaps = 4/86 (4%)
Query: 42 YFQVAESPTGEIMGYIMGKAEGHGDKWHGHVTALTVAPDYRRLGIAAELMSWLEDISEKK 101
F V ++G MG+ G G + + V Y+ + +M + +
Sbjct: 39 LFTVTLYDKDRLIG--MGRVIGDGG-TVFQIVDIAVLKSYQGQAYGSLIMEHIMKYIKNV 95
Query: 102 RAYFVDLFVRVSNTVAITMYKRLGYI 127
V + + ++ A +Y + G++
Sbjct: 96 SVESVYVSLI-ADYPADKLYVKFGFM 120
>3h4q_A Putative acetyltransferase; NP_371943.1, structural genomics center
for structural genomics, JCSG, protein structure INI
PSI-2; HET: MSE P33; 2.50A {Staphylococcus aureus subsp}
Length = 188
Score = 40.7 bits (95), Expect = 6e-05
Identities = 16/101 (15%), Positives = 33/101 (32%), Gaps = 8/101 (7%)
Query: 51 GEIMGYIMGKAEG-----HGDKWHGHVTALTV---APDYRRLGIAAELMSWLEDISEKKR 102
+I G+I+ + D A + G A EL +++ D+ + +
Sbjct: 77 DKIYGFIVVDQDQAEWYDDIDWPVNREGAFVIHRLTGSKEYKGAATELFNYVIDVVKARG 136
Query: 103 AYFVDLFVRVSNTVAITMYKRLGYIVYRTVLEYYSGSPDED 143
A + N A ++ + G+ L Y +
Sbjct: 137 AEVILTDTFALNKPAQGLFAKFGFHKVGEQLMEYPPYDKGE 177
>4fd5_A Arylalkylamine N-acetyltransferase 2; GNAT; 1.64A {Aedes aegypti}
PDB: 4fd6_A
Length = 222
Score = 40.5 bits (94), Expect = 8e-05
Identities = 14/84 (16%), Positives = 32/84 (38%), Gaps = 6/84 (7%)
Query: 60 KAEGHGDKWHGHVTALTVAPDYRRLGIAAELMSWLEDISEKKRAYFVDLFVRVSNTVAIT 119
K + + + V +R G+A +L+ E+++ F + + +
Sbjct: 123 KQFDVDKIFEIRILS--VDSRFRGKGLAKKLIEKSEELA--LDRGFQVMKTDATGAFSQR 178
Query: 120 MYKRLGYIVYRTVLEYYSGSPDED 143
+ LG+I + Y+ DE+
Sbjct: 179 VVSSLGFITKCEI--NYTDYLDEN 200
>3r1k_A Enhanced intracellular surviVal protein; GNAT, acetyltransferase,
transferase; HET: COA; 1.95A {Mycobacterium
tuberculosis}
Length = 428
Score = 40.5 bits (94), Expect = 1e-04
Identities = 15/74 (20%), Positives = 24/74 (32%), Gaps = 5/74 (6%)
Query: 63 GHGDKWHGHVTALTVAPDYRRLGIAAELMSWLEDISEKKRAYFVDLFVRVSNTVAITMYK 122
G ++ + VAP +RR G+ + + L L +Y
Sbjct: 99 GEVVLPTAGLSFVAVAPTHRRRGLLRAMCAELHRRIADSGYPVAALH-----ASEGGIYG 153
Query: 123 RLGYIVYRTVLEYY 136
R GY T+ E
Sbjct: 154 RFGYGPATTLHELT 167
>2fe7_A Probable N-acetyltransferase; structural genomics, pseudomonas
aerugi PSI, protein structure initiative; 2.00A
{Pseudomonas aeruginosa ucbpp-pa14} SCOP: d.108.1.1
Length = 166
Score = 38.5 bits (90), Expect = 3e-04
Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 10/73 (13%)
Query: 68 WHG----HVTALTVAPDYRRLGIAAELMSWLEDISEKKRAYFVDLFVRVSNTVAITMYKR 123
W G ++ L V P+YR +G L+ L + ++ V N AI Y+
Sbjct: 83 WLGRNGIYLEDLYVTPEYRGVGAGRRLLRELAREAVANDCGRLEWSVLDWNQPAIDFYRS 142
Query: 124 LG------YIVYR 130
+G ++ YR
Sbjct: 143 IGALPQDEWVRYR 155
>3sxn_A Enhanced intracellular surviVal protein; GNAT fold,
acetyltransferase, acetyl COA binding, transferas; HET:
COA; 2.03A {Mycobacterium smegmatis}
Length = 422
Score = 39.3 bits (91), Expect = 3e-04
Identities = 17/112 (15%), Positives = 30/112 (26%), Gaps = 10/112 (8%)
Query: 39 WPEYFQVAESPTGEIMGYIMG-----KAEGHGDKWHGHVTALTVAPDYRRLGIAAELMSW 93
V + +G + G ++ + VAP +RR G+ + +
Sbjct: 64 EDATVVVPDETDDAFVGQSLYLDMQLTVPGGEVLPVAGISFVAVAPTHRRRGVLRAMYTE 123
Query: 94 LEDISEKKRAYFVDLFVRVSNTVAITMYKRLGYIVYRTVLEYYSGSPDEDAY 145
L D + L +Y R GY V +
Sbjct: 124 LHDRIARAGYPLAVLTAS-----EGGIYGRFGYGVATIEQHVSVDRRLAQFH 170
>2pc1_A Acetyltransferase, GNAT family; NP_688560.1, structural genom joint
center for structural genomics, JCSG; HET: MSE; 1.28A
{Streptococcus agalactiae 2603V}
Length = 201
Score = 38.1 bits (88), Expect = 5e-04
Identities = 12/76 (15%), Positives = 24/76 (31%), Gaps = 3/76 (3%)
Query: 52 EIMGYIMGKAEGHGDKWHGHVTALTVAPDYRRLGIAAELMSWLEDISEKKRAYFVDLFVR 111
E+ I H + + + ++ +R G+A + L E +
Sbjct: 94 EVYDAIYEGKWLHDNHRYLTFHRIAISNQFRGRGLAQTFLQGLI---EGHKGPDFRCDTH 150
Query: 112 VSNTVAITMYKRLGYI 127
N + +LGY
Sbjct: 151 EKNVTMQHILNKLGYQ 166
>3i9s_A Integron cassette protein; oyster POND, woods HOLE,
acetyltransferase, structural genomics, PSI-2, protein
structure initiative; 2.20A {Vibrio cholerae}
Length = 183
Score = 37.8 bits (88), Expect = 6e-04
Identities = 15/51 (29%), Positives = 21/51 (41%)
Query: 75 LTVAPDYRRLGIAAELMSWLEDISEKKRAYFVDLFVRVSNTVAITMYKRLG 125
L V+ R GI +LM L I+ +D +N A YK +G
Sbjct: 109 LFVSSSARGKGIGLQLMKHLATIAITHNCQRLDWTAESTNPTAGKFYKSIG 159
>3iwg_A Acetyltransferase, GNAT family; structural genomics, APC, PSI-2,
protein structure initiativ midwest center for
structural genomics; HET: MSE; 2.30A {Colwellia
psychrerythraea}
Length = 276
Score = 38.2 bits (88), Expect = 7e-04
Identities = 11/85 (12%), Positives = 31/85 (36%), Gaps = 2/85 (2%)
Query: 51 GEIMGYIMGKAEGHGDKWHGHVTALTVAPDYRRLGIAAELMSWLEDISEKKRAYFVDLFV 110
G+++ + + + + VA R GIA +++++L + +
Sbjct: 189 GKLLAAGECRLFDQYQTEYADL-GMIVAQSNRGQGIAKKVLTFLTKHA-ATQGLTSICST 246
Query: 111 RVSNTVAITMYKRLGYIVYRTVLEY 135
+N A G+ ++++
Sbjct: 247 ESNNVAAQKAIAHAGFTSAHRIVQF 271
>1q2y_A Protein YJCF, similar to hypothetical proteins; GCN5-related
N-acetyltransferase superfamily fold, NYSGXRC, PSI,
protein structure initiative; 2.00A {Bacillus subtilis}
SCOP: d.108.1.1
Length = 140
Score = 37.2 bits (87), Expect = 7e-04
Identities = 14/53 (26%), Positives = 21/53 (39%), Gaps = 3/53 (5%)
Query: 77 VAPDYRRLGIAAELMSWLEDISEKKRAYFVDLFVRVSNTVAITMYKRLGYIVY 129
V +R G+ +M LE + A L + A+ YK+ GY V
Sbjct: 73 VLKSHRSAGVGGIIMKALEKAAADGGASGFILNAQTQ---AVPFYKKHGYRVL 122
>3g3s_A GCN5-related N-acetyltransferase; ZP_00874857.1, acetyltransferase
(GNAT) family, structural joint center for structural
genomics, JCSG; HET: MSE; 1.80A {Streptococcus suis}
Length = 249
Score = 37.8 bits (87), Expect = 8e-04
Identities = 13/77 (16%), Positives = 26/77 (33%), Gaps = 9/77 (11%)
Query: 51 GEIMGYIMGKAEGHGDKWHGHVTALTVAPDYRRLGIAAELMS-WLEDISEKKRAYFVDLF 109
G+++ A T DYR LG+A + + ++ D
Sbjct: 169 GQVVSGASSYASYSAGIEIEVDTR----EDYRGLGLAKACAAQLILACLDRGLYPSWD-- 222
Query: 110 VRVSNTVAITMYKRLGY 126
++ + ++LGY
Sbjct: 223 --AHTLTSLKLAEKLGY 237
>4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling;
HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB:
4avb_A* 4avc_A*
Length = 333
Score = 37.7 bits (87), Expect = 0.001
Identities = 15/78 (19%), Positives = 23/78 (29%), Gaps = 9/78 (11%)
Query: 74 ALTVAPDYRRLGIAAELMSWLEDISEKKRAYFVDLFVRVSNTVAITMYKRLGYIVYRTVL 133
A TVA Y+ GI + L+ L + + N T+ R G + R
Sbjct: 237 AFTVADAYQGRGIGSFLIGALSVAARVDGVERFAARMLSDNVPMRTIMDRYGAVWQRE-- 294
Query: 134 EYYSGSPDEDAYDMRKAL 151
D +
Sbjct: 295 -------DVGVITTMIDV 305
>3efa_A Putative acetyltransferase; structural genom 2, protein structure
initiative, midwest center for structu genomics, MCSG;
2.42A {Lactobacillus plantarum WCFS1}
Length = 147
Score = 36.5 bits (85), Expect = 0.001
Identities = 14/79 (17%), Positives = 28/79 (35%), Gaps = 15/79 (18%)
Query: 77 VAPDYRRLGIAAELMSWLEDISEKKRAYFVDLFVRVSNTVAITMYKRLGYIVYRTVLEYY 136
YR G +L++ E+ + ++ ++ ++ A Y+ GY V
Sbjct: 79 TRKAYRGHGWGRQLLTAAEEWATQRGFTHGEIHGELT---AQRFYELCGYRVT------- 128
Query: 137 SGSPDEDA----YDMRKAL 151
P ++ M K L
Sbjct: 129 -AGPYDEDGAPVVIMHKQL 146
>2ozg_A GCN5-related N-acetyltransferase; YP_325469.1, acetyltransfe (GNAT)
family, structural genomics, joint center for struct
genomics, JCSG; HET: COA; 2.00A {Anabaena variabilis}
SCOP: d.106.1.4 d.108.1.10
Length = 396
Score = 37.0 bits (85), Expect = 0.002
Identities = 16/85 (18%), Positives = 31/85 (36%), Gaps = 5/85 (5%)
Query: 51 GEIMGYIMGKAEGHGDKWHGHVTALTVAPDYRRLGIAAELMSWLEDISEKKRAYFVDLFV 110
G + MG+ G + A+ +AP+YR G A L+ ++ L+
Sbjct: 61 GGLAILPMGQWWGGQRVPMAGIAAVGIAPEYRGDGAAIALIQHTLQEISEQDIPISVLY- 119
Query: 111 RVSNTVAITMYKRLGYIVYRTVLEY 135
+Y++ GY + +
Sbjct: 120 ----PATQRLYRKAGYEQAGSSCVW 140
>2hv2_A Hypothetical protein; PSI, protein structure initiative, midwest
center for struct genomics, MCSG, structural genomics,
unknown function; HET: EPE PG4; 2.40A {Enterococcus
faecalis} SCOP: d.106.1.4 d.108.1.10
Length = 400
Score = 36.6 bits (84), Expect = 0.002
Identities = 12/66 (18%), Positives = 23/66 (34%), Gaps = 5/66 (7%)
Query: 70 GHVTALTVAPDYRRLGIAAELMSWLEDISEKKRAYFVDLFVRVSNTVAITMYKRLGYIVY 129
+ + P+YR G + +M + K++ L + Y++ GY
Sbjct: 79 AGIGYVASYPEYRGEGGISAIMKEMLADLAKQKVALSYLA-----PFSYPFYRQYGYEQT 133
Query: 130 RTVLEY 135
EY
Sbjct: 134 FEQAEY 139
>2q7b_A Acetyltransferase, GNAT family; NP_689019.1, structural GEN joint
center for structural genomics, JCSG; HET: MSE FLC;
2.00A {Streptococcus agalactiae 2603V}
Length = 181
Score = 35.6 bits (82), Expect = 0.003
Identities = 19/126 (15%), Positives = 38/126 (30%), Gaps = 14/126 (11%)
Query: 36 LAHWPEYFQ-------VAESPTGEIMGYIMGKAEGHGDKWHGHVTALTVAPDYRR--LGI 86
+ Y+Q +A +++G I + P YR + +
Sbjct: 59 IFQIENYYQNRKGQFWIALEN-EKVVGSIALLRIDDKT---AVLKKFFTYPKYRGNPVRL 114
Query: 87 AAELMSWLEDISEKKRAYFVDLFVRVSNTVAITMYKRLGYI-VYRTVLEYYSGSPDEDAY 145
+L + + + L + Y+ G+ + R L+ PD D+
Sbjct: 115 GRKLFERFMLFARASKFTRIVLDTPEKEKRSHFFYENQGFKQITRDELDVDYIFPDRDSR 174
Query: 146 DMRKAL 151
K L
Sbjct: 175 IYVKLL 180
>3eo4_A Uncharacterized protein MJ1062;
APC60792.2,MJ_1062,methanocaldococcus jannaschii DSM
2661, S genomics, PSI-2; HET: MES PG6; 2.19A
{Methanocaldococcus jannaschii}
Length = 164
Score = 34.6 bits (80), Expect = 0.006
Identities = 6/49 (12%), Positives = 16/49 (32%)
Query: 79 PDYRRLGIAAELMSWLEDISEKKRAYFVDLFVRVSNTVAITMYKRLGYI 127
I +S + + + +N +I +++ LG+
Sbjct: 100 FFLWGKHIGRHSVSLVLKWLKNIGYKKAHARILENNIRSIKLFESLGFK 148
>3tth_A Spermidine N1-acetyltransferase; central intermediary metabolism;
3.30A {Coxiella burnetii}
Length = 170
Score = 33.7 bits (78), Expect = 0.011
Identities = 21/138 (15%), Positives = 46/138 (33%), Gaps = 16/138 (11%)
Query: 3 TLRAFTCDD---MFKFNN-------VNLDPLTET-YGLSFYMQYLAHWPEYFQVAESPTG 51
L A +D + + NN +P +++++ E + +
Sbjct: 8 RLSALEREDLKFVHELNNNLSIMSYWFEEPYESYRELEDLHIKHIHDQSERRFIIKDLKD 67
Query: 52 EIMGYIMGKAEGHGDKWHGHVT-ALTVAPDYRRLGIAAELMSWLEDIS-EKKRAYFVDLF 109
+G + D H A+ ++P G A E + + + + L
Sbjct: 68 NKVGLVELT---EIDFIHRRCEFAIIISPGEEGKGYATEATDLTVEYAFSILNLHKIYLL 124
Query: 110 VRVSNTVAITMYKRLGYI 127
V N A+ +Y++ G+
Sbjct: 125 VDEDNPAALHIYRKSGFA 142
>3eg7_A Spermidine N1-acetyltransferase; structural genomics, IDP016
transferase, center for structural genomics of
infectious D csgid; HET: MSE; 2.38A {Vibrio cholerae}
Length = 176
Score = 33.7 bits (78), Expect = 0.013
Identities = 28/138 (20%), Positives = 52/138 (37%), Gaps = 16/138 (11%)
Query: 3 TLRAFTCDD---MFKFNN-------VNLDPL-TETYGLSFYMQYLAHWPEYFQVAESPTG 51
TLRA D + NN +P + Y +++ E V E
Sbjct: 9 TLRALERGDLRFIHNLNNNRNIMSYWFEEPYESFDELEELYNKHIHDNAERRFVVEDAQK 68
Query: 52 EIMGYIMGKAEGHGDKWHGHVT-ALTVAPDYRRLGIAAELMSWLEDIS-EKKRAYFVDLF 109
++G + + H + +AP+++ G A L++ D S + + L
Sbjct: 69 NLIGLVELI---EINYIHRSAEFQIIIAPEHQGKGFARTLINRALDYSFTILNLHKIYLH 125
Query: 110 VRVSNTVAITMYKRLGYI 127
V V N A+ +Y+ G++
Sbjct: 126 VAVENPKAVHLYEECGFV 143
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 34.6 bits (79), Expect = 0.015
Identities = 17/85 (20%), Positives = 34/85 (40%), Gaps = 12/85 (14%)
Query: 78 APDYRRLGIAAELMSWLEDISEK-KRAYFVDLFVRVSNTVAITMYKRLGYIVYRTVLEYY 136
A G+ ++ WLE+ S + Y L + +S I + + Y+V +L +
Sbjct: 205 AEKVFTQGL--NILEWLENPSNTPDKDYL--LSIPIS-CPLIGVIQLAHYVVTAKLLGF- 258
Query: 137 SGSPDEDAYDMRKALSRDVHGKSVI 161
+P E K + H + ++
Sbjct: 259 --TPGE-LRSYLKGAT--GHSQGLV 278
>1yx0_A Hypothetical protein YSNE; NESG, GFT structral genomics, SR220,
structural genomics, PSI, protein structure initiative;
NMR {Bacillus subtilis subsp} SCOP: d.108.1.1
Length = 159
Score = 33.2 bits (76), Expect = 0.016
Identities = 16/88 (18%), Positives = 38/88 (43%), Gaps = 7/88 (7%)
Query: 69 HGHVTALTVAPDYRRLGIAAELMSWLEDISEK---KRAYFVDLFVRVSNTVAITMYKRLG 125
HG + ++ + + R G+A +++ + + +EK +R ++ S A +Y+ G
Sbjct: 70 HGEIKSMRTSASHLRKGVAKQVLQHIIEEAEKRGYERLS-LETGSMASFEPARKLYESFG 128
Query: 126 YIVYRTVLEYYSGSPDEDAYDMRKALSR 153
++ + D ++ M K L
Sbjct: 129 ---FQYCEPFADYGEDPNSVFMTKKLLE 153
>3n7z_A Acetyltransferase, GNAT family; PSI2, MCSG, structural genomics,
protein structure initiativ midwest center for
structural genomics; 2.75A {Bacillus anthracis}
Length = 388
Score = 33.2 bits (75), Expect = 0.029
Identities = 14/57 (24%), Positives = 23/57 (40%), Gaps = 5/57 (8%)
Query: 70 GHVTALTVAPDYRRLGIAAELMSWLEDISEKKRAYFVDLFVRVSNTVAITMYKRLGY 126
G V + P+YRR G EL+ +K L A++ Y++ G+
Sbjct: 77 GGVAGVATYPEYRRSGYVKELLQHSLQTMKKDGYTVSMLH-----PFAVSFYRKYGW 128
>1vhs_A Similar to phosphinothricin acetyltransferase; structural genomics,
unknown function; 1.80A {Bacillus subtilis} SCOP:
d.108.1.1
Length = 175
Score = 32.5 bits (75), Expect = 0.039
Identities = 12/89 (13%), Positives = 33/89 (37%), Gaps = 13/89 (14%)
Query: 45 VAESPTGEIMGYIMGKAEGHGDKWHG-----HVTALTV--APDYRRLGIAAELMSWLEDI 97
VAE G + + + ++G +++ R G+ + L+ I
Sbjct: 56 VAEDENGNVAAW------ISFETFYGRPAYNKTAEVSIYIDEACRGKGVGSYLLQEALRI 109
Query: 98 SEKKRAYFVDLFVRVSNTVAITMYKRLGY 126
+ + F+ N ++ ++++ G+
Sbjct: 110 APNLGIRSLMAFIFGHNKPSLKLFEKHGF 138
>2i00_A Acetyltransferase, GNAT family; structural genomics, PSI-2,
structure initiative, midwest center for structural
genomic transferase; 2.30A {Enterococcus faecalis} SCOP:
d.106.1.4 d.108.1.10
Length = 406
Score = 32.9 bits (74), Expect = 0.040
Identities = 14/66 (21%), Positives = 27/66 (40%), Gaps = 5/66 (7%)
Query: 70 GHVTALTVAPDYRRLGIAAELMSWLEDISEKKRAYFVDLFVRVSNTVAITMYKRLGYIVY 129
G VT + P+Y G+ +L+ + + + + LF I Y+R G+ +
Sbjct: 92 GGVTGVGTYPEYANHGLMKDLIQTALEEMRQDKQWISYLF-----PYNIPYYRRKGWEIM 146
Query: 130 RTVLEY 135
L +
Sbjct: 147 SDKLSF 152
>3iyj_F Major capsid protein L1; bovine papillomavirus BPV1, single
cryo-EM, high resolution, late protein, VIR virus; 4.20A
{Bovine papillomavirus type 1}
Length = 495
Score = 32.5 bits (74), Expect = 0.053
Identities = 10/61 (16%), Positives = 22/61 (36%), Gaps = 11/61 (18%)
Query: 8 TCDDMFKFNNVNLDPLTE-----TYGLSFYMQYLAHWPEY-----FQVAESP-TGEIMGY 56
T D + N+ + ++ Y S + Y H EY ++ T + + +
Sbjct: 329 TVGDNTRGTNLTISVASDGTPLTEYDSSKFNVYHRHMEEYKLAFILELCSVEITAQTVSH 388
Query: 57 I 57
+
Sbjct: 389 L 389
>1qst_A TGCN5 histone acetyl transferase; GCN5-related N-acetyltransferase,
COA binding protein; HET: EPE; 1.70A {Tetrahymena
thermophila} SCOP: d.108.1.1 PDB: 1m1d_A* 1pu9_A*
1pua_A* 5gcn_A* 1qsr_A* 1q2d_A* 1q2c_A* 1qsn_A*
Length = 160
Score = 31.4 bits (71), Expect = 0.092
Identities = 14/57 (24%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
Query: 70 GHVTALTVAPDYRRLGIAAELMSWLEDISEKKRAYFVDLFVRVSNTVAITMYKRLGY 126
V L V + + G LM+ +D +K+ + L N AI +K+ G+
Sbjct: 73 AEVAFLAVTANEQVRGYGTRLMNKFKDHMQKQNIEY--LLTYADNF-AIGYFKKQGF 126
>2j8m_A Acetyltransferase PA4866 from P. aeruginosa; GCN5 family,
phosphinothricin, methionine sulfone, methionine
sulfoximine; 1.44A {Pseudomonas aeruginosa} PDB: 2bl1_A
2j8n_A 2j8r_A* 1yvo_A
Length = 172
Score = 31.0 bits (71), Expect = 0.10
Identities = 18/89 (20%), Positives = 36/89 (40%), Gaps = 13/89 (14%)
Query: 45 VAESPTGEIMGYIMGKAEGHGDKWHGHV-------TALTVAPDYRRLGIAAELMSWLEDI 97
VA GE++GY W ++ V D R G+ +L+ L +
Sbjct: 57 VASDAAGEVLGY------ASYGDWRPFEGFRGTVEHSVYVRDDQRGKGLGVQLLQALIER 110
Query: 98 SEKKRAYFVDLFVRVSNTVAITMYKRLGY 126
+ + + + + N +I +++RLG+
Sbjct: 111 ARAQGLHVMVAAIESGNAASIGLHRRLGF 139
>3f5b_A Aminoglycoside N(6')acetyltransferase; APC60744, legionella
pneumophila subsp. pneumophila, structural genomics,
PSI-2; HET: MSE; 2.00A {Legionella pneumophila subsp}
Length = 182
Score = 31.0 bits (70), Expect = 0.11
Identities = 15/159 (9%), Positives = 44/159 (27%), Gaps = 18/159 (11%)
Query: 3 TLRAFTCDDMFKFNNVNLDP-LTETYGLSFYMQYLAHWPEYFQVAESPT--------GEI 53
+ P + E + E+ +
Sbjct: 16 CFKQMNKSQHELVLGWIHQPHINEWLHGDGLSNTIKDLHEFLNDGKPWATHWIAYDNEIP 75
Query: 54 MGYIMGKAEGHGDKWHGHVTA---LTVAPDYRRLGIAAELM-SWLEDISEKKRAYFVDLF 109
Y++ +++ DY G++ +++ ++ + ++
Sbjct: 76 FAYLITSEIEKSEEYPDGAVTLDLFICRLDYIGKGLSVQMIHEFILSQFSDTKIVLIN-- 133
Query: 110 VRVSNTVAITMYKRLGYIVYRTVLEYYSGSPDEDAYDMR 148
+SN A+ +YK+ G+ + + + Y M+
Sbjct: 134 PEISNERAVHVYKKAGFEIIGEFIASWH---PVPHYKMK 169
>1yr0_A AGR_C_1654P, phosphinothricin acetyltransferase; structural
genomics, protein structure initiative, NYSGXRC, PSI;
2.00A {Agrobacterium tumefaciens str} SCOP: d.108.1.1
Length = 175
Score = 31.0 bits (71), Expect = 0.13
Identities = 14/50 (28%), Positives = 23/50 (46%)
Query: 77 VAPDYRRLGIAAELMSWLEDISEKKRAYFVDLFVRVSNTVAITMYKRLGY 126
V D R GI LM L D + + + + NT +I +++ LG+
Sbjct: 91 VHKDARGHGIGKRLMQALIDHAGGNDVHVLIAAIEAENTASIRLHESLGF 140
>3dr6_A YNCA; acetyltransferase, csgid target, essential gene, IDP00086,
structural genomics, center for STRU genomics of
infectious diseases; HET: MSE; 1.75A {Salmonella
typhimurium} PDB: 3dr8_A*
Length = 174
Score = 30.6 bits (70), Expect = 0.16
Identities = 11/50 (22%), Positives = 25/50 (50%)
Query: 77 VAPDYRRLGIAAELMSWLEDISEKKRAYFVDLFVRVSNTVAITMYKRLGY 126
V P ++ G+ +L+S L D + + + + + N +I ++ LG+
Sbjct: 90 VHPAHQGKGLGRKLLSRLIDEARRCGKHVMVAGIESQNAASIRLHHSLGF 139
>2jlm_A Putative phosphinothricin N-acetyltransferase; methionine
sulfoximine; 2.35A {Acinetobacter baylyi}
Length = 182
Score = 30.6 bits (70), Expect = 0.17
Identities = 15/89 (16%), Positives = 39/89 (43%), Gaps = 13/89 (14%)
Query: 45 VAESPTGEIMGYIMGKAEGHGDKWHGHV-------TALTVAPDYRRLGIAAELMSWLEDI 97
A + G+++G+ + ++ + DYR LG++ LM+ L
Sbjct: 65 GAVNEVGQLLGF------ASWGSFRAFPAYKYTVEHSVYIHKDYRGLGLSKHLMNELIKR 118
Query: 98 SEKKRAYFVDLFVRVSNTVAITMYKRLGY 126
+ + + + + +N +I ++++LG+
Sbjct: 119 AVESEVHVMVGCIDATNVASIQLHQKLGF 147
>2qml_A BH2621 protein; structural genomics, joint center for structural
genomics, J protein structure initiative, PSI-2, unknown
function; HET: MSE; 1.55A {Bacillus halodurans}
Length = 198
Score = 30.2 bits (68), Expect = 0.26
Identities = 15/112 (13%), Positives = 30/112 (26%), Gaps = 12/112 (10%)
Query: 31 FYMQYLAHWPEYFQVAESPTGEIMGYIMGKAEGHGDKWHGHVTA---------LTVAPDY 81
+L + V G M Y D + L +Y
Sbjct: 60 HLQTFLNDDHQTLMVGAI-NGVPMSYWE-SYWVKEDIIANYYPFEEHDQGIHLLIGPQEY 117
Query: 82 RRLGIAAELMSWLED-ISEKKRAYFVDLFVRVSNTVAITMYKRLGYIVYRTV 132
G+ L+ + ++ + N I ++K+ G+ + V
Sbjct: 118 LGQGLIYPLLLAIMQQKFQEPDTNTIVAEPDRRNKKMIHVFKKCGFQPVKEV 169
>2ozh_A Hypothetical protein XCC2953; structural genomics, joint center for
structural genomics, J protein structure initiative,
PSI-2; 1.40A {Xanthomonas campestris PV}
Length = 142
Score = 29.9 bits (67), Expect = 0.27
Identities = 11/59 (18%), Positives = 23/59 (38%), Gaps = 4/59 (6%)
Query: 68 WHGHVTALTVAPDYRRLGIAAELMSWLEDISEKKRAYFVDLFVRVSNTVAITMYKRLGY 126
++ + V P++R G + LM + + + L + A +Y R G+
Sbjct: 68 TFAYLGDVFVLPEHRGRGYSKALMDAVMAHPDLQGLRRFSLAT----SDAHGLYARYGF 122
>1z4r_A General control of amino acid synthesis protein 5-like 2; GCN5,
acetyltransferase, SGC, structural genomics, structural
genomics consortium; HET: ACO; 1.74A {Homo sapiens}
SCOP: d.108.1.1 PDB: 1cm0_B*
Length = 168
Score = 29.9 bits (67), Expect = 0.31
Identities = 11/57 (19%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
Query: 70 GHVTALTVAPDYRRLGIAAELMSWLEDISEKKRAYFVDLFVRVSNTVAITMYKRLGY 126
+ V + + G LM+ L++ K + F+ ++ AI +K+ G+
Sbjct: 80 TEIVFCAVTSNEQVKGYGTHLMNHLKEYHIKHN---ILYFLTYADEYAIGYFKKQGF 133
>3d2m_A Putative acetylglutamate synthase; protein-COA-Glu ternary complex,
transferase; HET: COA GLU; 2.21A {Neisseria gonorrhoeae}
PDB: 2r8v_A* 3b8g_A* 2r98_A* 3d2p_A*
Length = 456
Score = 29.9 bits (68), Expect = 0.41
Identities = 8/37 (21%), Positives = 15/37 (40%), Gaps = 2/37 (5%)
Query: 74 ALTVAPDYRRLGIAAELMSWLEDISEKKRAYFVDLFV 110
L V+P + G L++ + D + + LF
Sbjct: 376 CLAVSPQAQDGGYGERLLAHIIDKA--RGIGISRLFA 410
>2r5i_A L1 protein; HPV18, pentamer, structure, type specific epitope,
capsid, capsid protein, virion; 3.40A {Human
papillomavirus type 18} PDB: 3ofl_A*
Length = 428
Score = 29.7 bits (67), Expect = 0.47
Identities = 13/51 (25%), Positives = 19/51 (37%), Gaps = 6/51 (11%)
Query: 13 FKFNNVNLDPLTETYGLSFYMQYLAHWPEY-----FQVAESP-TGEIMGYI 57
P+ Y + + QY H EY FQ+ T ++M YI
Sbjct: 323 LTICASTQSPVPGQYDATKFKQYSRHVEEYDLQFIFQLCTITLTADVMSYI 373
>3oae_A Late major capsid protein L1; jelly roll, receptor HSPG, virus
capsid, VIR protein; HET: JHM IDS; 2.80A {Human
papillomavirus} PDB: 2r5h_A 2r5j_A 2r5k_A
Length = 428
Score = 29.4 bits (66), Expect = 0.63
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 10/60 (16%)
Query: 8 TCDDMFKFNNVNL----DPLTETYGLSFYMQYLAHWPEY-----FQVAESP-TGEIMGYI 57
T D + N++L TY + + +YL H EY FQ+ + T ++M YI
Sbjct: 315 TVVDTTRSTNMSLCAAISTSETTYKNTNFKEYLRHGEEYDLQFIFQLCKITLTADVMTYI 374
>1dzl_A Late major capsid protein L1; icosahedral; 3.50A {Human
papillomavirus type 16} SCOP: b.121.6.1
Length = 505
Score = 29.4 bits (66), Expect = 0.67
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 10/60 (16%)
Query: 8 TCDDMFKFNNVNL----DPLTETYGLSFYMQYLAHWPEY-----FQVAESP-TGEIMGYI 57
T D + N++L TY + + +YL H EY FQ+ + T ++M YI
Sbjct: 332 TVVDTTRSTNMSLCAAISTSETTYKNTNFKEYLRHGEEYDLQFIFQLCKITLTADVMTYI 391
>1xeb_A Hypothetical protein PA0115; midwest center for structural
genomics, MCSG, structural GEN protein structure
initiative, PSI, APC22065; 2.35A {Pseudomonas
aeruginosa} SCOP: d.108.1.1
Length = 150
Score = 28.2 bits (63), Expect = 1.1
Identities = 16/105 (15%), Positives = 35/105 (33%), Gaps = 17/105 (16%)
Query: 51 GEIMGYIMGKAEGHGDKWHGHVTALTVAPDYRRLGIAAELMSWLEDISEKKRAYFVDLFV 110
G+++ Y+ + + + + R G+ +LM +E+ ++D V
Sbjct: 58 GQLLAYLRLLDPVRHEG-QVVIGRVVSSSAARGQGLGHQLMERALQAAERL---WLDTPV 113
Query: 111 RVS-NTVAITMYKRLGYIVYRTVLEYYSGSPDEDA----YDMRKA 150
+S Y R G++ + MR+A
Sbjct: 114 YLSAQAHLQAYYGRYGFVAV--------TEVYLEDDIPHIGMRRA 150
>3vc8_A RNA-directed RNA polymerase; NEW fold, HOST membrane, multi-PASS
membrane protein, cytopl hydrolase, viral protein; 2.00A
{Murine hepatitis virus} PDB: 3vcb_A
Length = 94
Score = 27.3 bits (60), Expect = 1.2
Identities = 10/41 (24%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 107 DLFVRVSNTVAITMYKRLGYIVYRTVLEYYSGSPDEDAYDM 147
+ + ++ N+V+ + R Y+ Y+SG D AY
Sbjct: 20 ESYCKLKNSVSDVAFNR--YLSLYNKYRYFSGKMDTAAYRE 58
>2bue_A AAC(6')-IB; GNAT, transferase, aminoglycoside, fluoroquinolone,
acetyltransferase, antibiotic resistance; HET: COA RIO;
1.7A {Escherichia coli} PDB: 1v0c_A* 2vqy_A* 2prb_A*
2qir_A* 2pr8_A*
Length = 202
Score = 28.3 bits (63), Expect = 1.3
Identities = 20/112 (17%), Positives = 34/112 (30%), Gaps = 10/112 (8%)
Query: 31 FYMQYLAHWPEYFQVAESPTGEIMGYI---------MGKAEGHGDKWHGHVTALTVAPDY 81
Y+ + GE +GY G E D + L
Sbjct: 67 QYLPSVLAQESVTPYIAMLNGEPIGYAQSYVALGSGDGWWEEETDPGVRGIDQLLANASQ 126
Query: 82 RRLGIAAELM-SWLEDISEKKRAYFVDLFVRVSNTVAITMYKRLGYIVYRTV 132
G+ +L+ + +E + + SN AI Y++ G+ TV
Sbjct: 127 LGKGLGTKLVRALVELLFNDPEVTKIQTDPSPSNLRAIRCYEKAGFERQGTV 178
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 28.3 bits (62), Expect = 1.4
Identities = 21/113 (18%), Positives = 29/113 (25%), Gaps = 42/113 (37%)
Query: 74 ALTVAPDYRRLGIAAELMS--------WLEDISEKK----------------RAYFVDLF 109
LT P RRL I AE + W +K R F L
Sbjct: 322 VLTTNP--RRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLS 379
Query: 110 VRVSNTVAITMYKRLGYIVYRTVLE-YYSGSPDEDAYDMRKALSRDVHGKSVI 161
V + I +L + D + L H S++
Sbjct: 380 VFPPS-AHIPT----------ILLSLIWFDVIKSDVMVVVNKL----HKYSLV 417
>3fbu_A Acetyltransferase, GNAT family; structur genomics, PSI2, MCSG,
protein structure initiative, midwest for structural
genomics; HET: COA; 1.80A {Bacillus anthracis str}
Length = 168
Score = 27.2 bits (61), Expect = 2.1
Identities = 18/100 (18%), Positives = 34/100 (34%), Gaps = 19/100 (19%)
Query: 3 TLRAFTCDD---MFKFNN-------VNLDPLTETYGLSFYMQYLAHWPEYFQVAESPTGE 52
+R F D + ++ + + TE +F + + + F V
Sbjct: 9 LIRKFEFKDWEAVHEYTSDSDVMKYIPEGVFTEEDTRNFVNKNMGENAKNFPVILIGENI 68
Query: 53 IMGYIMGKAEGHGDKWHGHVTA---LTVAPDYRRLGIAAE 89
++G+I+ K+ G T P Y G A+E
Sbjct: 69 LVGHIVFH------KYFGEHTYEIGWVFNPKYFNKGYASE 102
>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein;
structural genomics, ssgcid; 1.70A {Mycobacterium
smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A
Length = 454
Score = 27.3 bits (61), Expect = 3.4
Identities = 8/29 (27%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
Query: 146 DMRKALSRDVH--GKSVIPLKQAVRPEDV 172
M +A+ G+ + L Q +P DV
Sbjct: 396 KMTEAIPLATREVGRRLNSLFQGGQPVDV 424
>3gzf_A Replicase polyprotein 1AB; FCOV, NSP4, viral protein; 2.76A {Feline
coronavirus}
Length = 96
Score = 25.8 bits (56), Expect = 4.1
Identities = 10/41 (24%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 107 DLFVRVSNTVAITMYKRLGYIVYRTVLEYYSGSPDEDAYDM 147
+ + N+ ++ K Y +YY+GS E Y M
Sbjct: 25 RSYETLVNSTSLDRIKS--YANSFNKYKYYTGSMGEADYRM 63
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase,
P-type ATPase, membrane protein, hydrolase, aluminium
fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A
1iwc_A 1iwf_A
Length = 1034
Score = 26.8 bits (60), Expect = 4.8
Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 6/55 (10%)
Query: 65 GDKWHGHVTALTVAPDYRRLGIAAELMSWLEDISEKKRAYFVDLFVRVSNTVAIT 119
GD H +TA +A +GI +E +EDI+ + R + + + I
Sbjct: 628 GD--HP-ITAKAIA---ASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVIN 676
>1w5c_T Cytochrome C-550; photosynthesis, water oxidation, photosystem,
membrane protein; HET: CL1 CLA PHO HEM HEC BCR; 3.2A
{Thermosynechococcus elongatus} SCOP: i.5.1.1
Length = 163
Score = 26.0 bits (56), Expect = 6.2
Identities = 13/55 (23%), Positives = 23/55 (41%)
Query: 16 NNVNLDPLTETYGLSFYMQYLAHWPEYFQVAESPTGEIMGYIMGKAEGHGDKWHG 70
N D E + ++ +P+ + E I G+I+ + + GDKW G
Sbjct: 104 NPTTYDGEQEIAEVHPSLRSADIFPKMRNLTEKDLVAIAGHILVEPKILGDKWGG 158
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+
binding, haloacid dehydrogenease superfamily, phosphate
analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias}
PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A
1mo8_A* 1q3i_A
Length = 1028
Score = 26.1 bits (58), Expect = 7.4
Identities = 13/55 (23%), Positives = 24/55 (43%), Gaps = 6/55 (10%)
Query: 65 GDKWHGHVTALTVAPDYRRLGIAAELMSWLEDISEKKRAYFVDLFVRVSNTVAIT 119
GD H +TA +A + +GI +E +EDI+ + + R + +
Sbjct: 623 GD--HP-ITAKAIA---KGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVH 671
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.321 0.137 0.419
Gapped
Lambda K H
0.267 0.0478 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 2,941,940
Number of extensions: 177412
Number of successful extensions: 690
Number of sequences better than 10.0: 1
Number of HSP's gapped: 614
Number of HSP's successfully gapped: 172
Length of query: 175
Length of database: 6,701,793
Length adjustment: 87
Effective length of query: 88
Effective length of database: 4,272,666
Effective search space: 375994608
Effective search space used: 375994608
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 54 (25.2 bits)