BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13685
(72 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A1ZAI5|FACR1_DROME Putative fatty acyl-CoA reductase CG5065 OS=Drosophila melanogaster
GN=CG5065 PE=3 SV=1
Length = 625
Score = 60.1 bits (144), Expect = 4e-09, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 38/59 (64%)
Query: 7 VISTWSDPIAGYIDNLYGPTGLVTGVQAGIIRCISNARHIKADMVPADYVVNALICCTW 65
V ++ ++P AG++DN GPTGLV+ + G+ R + ++ ADMVP D V+N +I W
Sbjct: 347 VTASLNEPFAGWVDNFNGPTGLVSALAKGMFRTMMCEKNYVADMVPVDIVINLMIAAAW 405
>sp|Q0P5J1|FACR2_BOVIN Fatty acyl-CoA reductase 2 OS=Bos taurus GN=FAR2 PE=2 SV=1
Length = 515
Score = 57.4 bits (137), Expect = 3e-08, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 33/57 (57%)
Query: 9 STWSDPIAGYIDNLYGPTGLVTGVQAGIIRCISNARHIKADMVPADYVVNALICCTW 65
+TW +P G++DNL GP+GL+ G +R I AD++PAD VVN + W
Sbjct: 234 ATWQEPFPGWVDNLNGPSGLIIAAGKGFLRSIRATPMAVADLIPADTVVNLTLAVGW 290
>sp|Q5R834|FACR1_PONAB Fatty acyl-CoA reductase 1 OS=Pongo abelii GN=FAR1 PE=2 SV=1
Length = 515
Score = 56.6 bits (135), Expect = 4e-08, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 7 VISTWSDPIAGYIDNLYGPTGLVTGVQAGIIRCISNARHIKADMVPADYVVNALICCTW- 65
V ++W +P G+IDN GP+GL GI+R I + + AD+VP D VVN + W
Sbjct: 232 VGASWKEPFPGWIDNFNGPSGLFIAAGKGILRTIRASNNALADLVPVDVVVNMSLAAAWY 291
Query: 66 DGYNK 70
G N+
Sbjct: 292 SGVNR 296
>sp|Q8WVX9|FACR1_HUMAN Fatty acyl-CoA reductase 1 OS=Homo sapiens GN=FAR1 PE=1 SV=1
Length = 515
Score = 56.6 bits (135), Expect = 4e-08, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 7 VISTWSDPIAGYIDNLYGPTGLVTGVQAGIIRCISNARHIKADMVPADYVVNALICCTW- 65
V ++W +P G+IDN GP+GL GI+R I + + AD+VP D VVN + W
Sbjct: 232 VGASWKEPFPGWIDNFNGPSGLFIAAGKGILRTIRASNNALADLVPVDVVVNMSLAAAWY 291
Query: 66 DGYNK 70
G N+
Sbjct: 292 SGVNR 296
>sp|Q7TNT2|FACR2_MOUSE Fatty acyl-CoA reductase 2 OS=Mus musculus GN=Far2 PE=2 SV=1
Length = 515
Score = 56.6 bits (135), Expect = 4e-08, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 33/59 (55%)
Query: 7 VISTWSDPIAGYIDNLYGPTGLVTGVQAGIIRCISNARHIKADMVPADYVVNALICCTW 65
V +TW +P G++DNL GP+GL+ G +R I AD++P D VVN I W
Sbjct: 232 VGATWQEPFPGWVDNLNGPSGLIIATGKGFLRSIKATPMAVADVIPVDTVVNLTIAVGW 290
>sp|Q7ZXF5|FACR1_XENLA Fatty acyl-CoA reductase 1 OS=Xenopus laevis GN=far1 PE=2 SV=1
Length = 515
Score = 56.2 bits (134), Expect = 6e-08, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 7 VISTWSDPIAGYIDNLYGPTGLVTGVQAGIIRCISNARHIKADMVPADYVVNALICCTW- 65
V ++W +P G+IDN GP+GL GI+R + + + AD++P D VVN + W
Sbjct: 232 VGASWKEPFPGWIDNFNGPSGLFIAAGKGILRTMRASNNAVADLIPVDVVVNTTLAAAWY 291
Query: 66 DGYNK 70
G N+
Sbjct: 292 SGVNR 296
>sp|Q922J9|FACR1_MOUSE Fatty acyl-CoA reductase 1 OS=Mus musculus GN=Far1 PE=1 SV=1
Length = 515
Score = 55.8 bits (133), Expect = 7e-08, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 7 VISTWSDPIAGYIDNLYGPTGLVTGVQAGIIRCISNARHIKADMVPADYVVNALICCTW- 65
V ++W +P G+IDN GP+GL GI+R + + + AD+VP D VVN + W
Sbjct: 232 VGASWKEPFPGWIDNFNGPSGLFIAAGKGILRTMRASNNALADLVPVDVVVNTSLAAAWY 291
Query: 66 DGYNK 70
G N+
Sbjct: 292 SGVNR 296
>sp|Q66H50|FACR1_RAT Fatty acyl-CoA reductase 1 OS=Rattus norvegicus GN=Far1 PE=2 SV=1
Length = 515
Score = 55.5 bits (132), Expect = 9e-08, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 7 VISTWSDPIAGYIDNLYGPTGLVTGVQAGIIRCISNARHIKADMVPADYVVNALICCTW- 65
V ++W +P G+IDN GP+GL GI+R + + + AD+VP D VVN + W
Sbjct: 232 VGASWKEPFPGWIDNFNGPSGLFIAAGKGILRTMRASNNALADLVPVDVVVNTSLAAAWY 291
Query: 66 DGYNK 70
G N+
Sbjct: 292 SGVNR 296
>sp|Q5ZM72|FACR1_CHICK Fatty acyl-CoA reductase 1 OS=Gallus gallus GN=FAR1 PE=2 SV=1
Length = 515
Score = 55.1 bits (131), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 7 VISTWSDPIAGYIDNLYGPTGLVTGVQAGIIRCISNARHIKADMVPADYVVNALICCTW- 65
V ++W +P G+IDN GP+GL GI+R + + AD+VP D VVN + W
Sbjct: 232 VGASWKEPFPGWIDNFNGPSGLFIAAGKGILRTMRASNGAVADLVPVDVVVNMTLAAAWY 291
Query: 66 DGYNK 70
G N+
Sbjct: 292 SGVNR 296
>sp|Q96K12|FACR2_HUMAN Fatty acyl-CoA reductase 2 OS=Homo sapiens GN=FAR2 PE=2 SV=1
Length = 515
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 33/59 (55%)
Query: 7 VISTWSDPIAGYIDNLYGPTGLVTGVQAGIIRCISNARHIKADMVPADYVVNALICCTW 65
V +TW +P G++DN+ GP G++ G +R I AD++P D VVN ++ W
Sbjct: 232 VGATWQEPFPGWVDNINGPNGIIIATGKGFLRAIKATPMAVADVIPVDTVVNLMLAVGW 290
>sp|Q9FMQ9|FACR7_ARATH Putative fatty acyl-CoA reductase 7 OS=Arabidopsis thaliana GN=FAR7
PE=3 SV=1
Length = 409
Score = 42.4 bits (98), Expect = 8e-04, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 32/60 (53%)
Query: 7 VISTWSDPIAGYIDNLYGPTGLVTGVQAGIIRCISNARHIKADMVPADYVVNALICCTWD 66
+ ST+SDP G+I+ L ++ GI++C + D++P D VVNA+I D
Sbjct: 192 ITSTFSDPFPGWIEGLKTVDSVIIFYGKGILKCFLVDQKTVCDIIPVDMVVNAMIAIAAD 251
>sp|Q960W6|FACR3_DROME Putative fatty acyl-CoA reductase CG8306 OS=Drosophila melanogaster
GN=CG8306 PE=2 SV=1
Length = 516
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 28/55 (50%)
Query: 7 VISTWSDPIAGYIDNLYGPTGLVTGVQAGIIRCISNARHIKADMVPADYVVNALI 61
+ + W +PI G+ + GP G G G++R + I D +P D VVN +I
Sbjct: 235 ITAAWKEPIPGWTISKNGPQGFFMGASKGVLRRLPLDPSIIMDYIPIDVVVNGII 289
>sp|Q0WRB0|FACR5_ARATH Probable fatty acyl-CoA reductase 5 OS=Arabidopsis thaliana GN=FAR5
PE=2 SV=1
Length = 496
Score = 38.5 bits (88), Expect = 0.014, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 29/55 (52%)
Query: 7 VISTWSDPIAGYIDNLYGPTGLVTGVQAGIIRCISNARHIKADMVPADYVVNALI 61
+ ST S+P G+I+ L ++ G+++C + DM+P D V NA+I
Sbjct: 266 ITSTLSEPFPGWIEGLRTVDSVIIAYGKGVLKCFLVDVNSVCDMIPVDMVANAMI 320
>sp|A1ZAI3|FACR2_DROME Putative fatty acyl-CoA reductase CG8303 OS=Drosophila melanogaster
GN=CG8303 PE=2 SV=2
Length = 620
Score = 36.6 bits (83), Expect = 0.048, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 7 VISTWSDPIAGYIDNL-YGPTGLVTGVQAGIIRCISNARHIKADMVPADYVVNALICCTW 65
V T P+ G++ N G G + G GI R + + D++P DYV+N+ + W
Sbjct: 344 VYGTLEHPMKGWVGNANSGHLGFLAGFVKGIFRTMCGNANAVIDIIPCDYVINSSLVMGW 403
>sp|Q39152|FACR1_ARATH Fatty acyl-CoA reductase 1 OS=Arabidopsis thaliana GN=FAR1 PE=2
SV=1
Length = 491
Score = 36.2 bits (82), Expect = 0.054, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 30/55 (54%)
Query: 7 VISTWSDPIAGYIDNLYGPTGLVTGVQAGIIRCISNARHIKADMVPADYVVNALI 61
+ ST ++P G+I+ L ++ G ++C + D++PAD VVNA++
Sbjct: 263 ITSTIAEPFPGWIEGLKTLDSVIVAYGKGRLKCFLADSNSVFDLIPADMVVNAMV 317
>sp|Q9LXN3|FACR4_ARATH Probable fatty acyl-CoA reductase 4 OS=Arabidopsis thaliana GN=FAR4
PE=2 SV=1
Length = 493
Score = 35.4 bits (80), Expect = 0.10, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 29/55 (52%)
Query: 7 VISTWSDPIAGYIDNLYGPTGLVTGVQAGIIRCISNARHIKADMVPADYVVNALI 61
+ ST+S+P G+I+ L ++ G ++C + D++P D V NA++
Sbjct: 265 ITSTFSEPFPGWIEGLRTIDSVIVAYGKGRLKCFLADPNSVLDLIPVDMVANAMV 319
>sp|Q9XGY7|FAR_SIMCH Alcohol-forming fatty acyl-CoA reductase OS=Simmondsia chinensis
PE=1 SV=1
Length = 493
Score = 33.1 bits (74), Expect = 0.46, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 28/55 (50%)
Query: 7 VISTWSDPIAGYIDNLYGPTGLVTGVQAGIIRCISNARHIKADMVPADYVVNALI 61
+ ST+ +P G+++ + + G +RC+ D++PAD VVNA I
Sbjct: 266 ITSTFKEPFPGWVEGVRTIDNVPVYYGKGRLRCMLCGPSTIIDLIPADMVVNATI 320
>sp|Q93ZB9|FACR3_ARATH Fatty acyl-CoA reductase 3 OS=Arabidopsis thaliana GN=FAR3 PE=2
SV=1
Length = 493
Score = 32.3 bits (72), Expect = 0.79, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 28/55 (50%)
Query: 7 VISTWSDPIAGYIDNLYGPTGLVTGVQAGIIRCISNARHIKADMVPADYVVNALI 61
+ ST+ +P G+ + + L G G + C +D++PAD VVN+++
Sbjct: 269 ITSTFKEPFPGWTEGIRTIDSLAVGYGKGKLTCFLCDLDAVSDVMPADMVVNSIL 323
>sp|Q1PEI6|FACR8_ARATH Fatty acyl-CoA reductase 8 OS=Arabidopsis thaliana GN=FAR8 PE=2
SV=1
Length = 496
Score = 30.8 bits (68), Expect = 2.3, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 25/50 (50%)
Query: 7 VISTWSDPIAGYIDNLYGPTGLVTGVQAGIIRCISNARHIKADMVPADYV 56
+ ST +P G+I+ L ++ G+++C + DM+PAD V
Sbjct: 266 ITSTLFEPFPGWIEGLRTVDSVIIAYGKGVLKCFLVDVNSVCDMIPADMV 315
>sp|Q6GFJ3|GSA2_STAAR Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Staphylococcus aureus
(strain MRSA252) GN=hemL2 PE=3 SV=1
Length = 429
Score = 29.3 bits (64), Expect = 7.4, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 1 MSAYKSVISTWSDPIAG-YIDNLYGPTGLVTGVQAGIIRCISNARHIKADMVPADYVVNA 59
++AYK I W D IA ++ + G G+V Q G + ++ H +V D V+ A
Sbjct: 187 INAYKEAIEFWGDEIAAVLVEPIVGNFGMVMP-QPGFLEEVNEISHSNGTLVIYDEVITA 245
Query: 60 L 60
Sbjct: 246 F 246
>sp|Q8NVU6|GSA2_STAAW Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Staphylococcus aureus
(strain MW2) GN=hemL2 PE=3 SV=1
Length = 429
Score = 28.9 bits (63), Expect = 9.5, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 1 MSAYKSVISTWSDPIAG-YIDNLYGPTGLVTGVQAGIIRCISNARHIKADMVPADYVVNA 59
++AYK I W D IA ++ + G G+V Q G + ++ H +V D V+ A
Sbjct: 187 INAYKEAIEFWGDEIAAVLVEPIVGNFGMVMP-QPGFLEEVNEISHNNGTLVIYDEVITA 245
Query: 60 L 60
Sbjct: 246 F 246
>sp|A8YY36|GSA2_STAAT Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Staphylococcus aureus
(strain USA300 / TCH1516) GN=hemL2 PE=3 SV=1
Length = 429
Score = 28.9 bits (63), Expect = 9.5, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 1 MSAYKSVISTWSDPIAG-YIDNLYGPTGLVTGVQAGIIRCISNARHIKADMVPADYVVNA 59
++AYK I W D IA ++ + G G+V Q G + ++ H +V D V+ A
Sbjct: 187 INAYKEAIEFWGDEIAAVLVEPIVGNFGMVMP-QPGFLEEVNEISHNNGTLVIYDEVITA 245
Query: 60 L 60
Sbjct: 246 F 246
>sp|Q6G870|GSA2_STAAS Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Staphylococcus aureus
(strain MSSA476) GN=hemL2 PE=3 SV=1
Length = 429
Score = 28.9 bits (63), Expect = 9.5, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 1 MSAYKSVISTWSDPIAG-YIDNLYGPTGLVTGVQAGIIRCISNARHIKADMVPADYVVNA 59
++AYK I W D IA ++ + G G+V Q G + ++ H +V D V+ A
Sbjct: 187 INAYKEAIEFWGDEIAAVLVEPIVGNFGMVMP-QPGFLEEVNEISHNNGTLVIYDEVITA 245
Query: 60 L 60
Sbjct: 246 F 246
>sp|Q7A4T5|GSA2_STAAN Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Staphylococcus aureus
(strain N315) GN=hemL2 PE=1 SV=1
Length = 429
Score = 28.9 bits (63), Expect = 9.5, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 1 MSAYKSVISTWSDPIAG-YIDNLYGPTGLVTGVQAGIIRCISNARHIKADMVPADYVVNA 59
++AYK I W D IA ++ + G G+V Q G + ++ H +V D V+ A
Sbjct: 187 INAYKEAIEFWGDEIAAVLVEPIVGNFGMVMP-QPGFLEEVNEISHNNGTLVIYDEVITA 245
Query: 60 L 60
Sbjct: 246 F 246
>sp|Q99T15|GSA2_STAAM Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Staphylococcus aureus
(strain Mu50 / ATCC 700699) GN=hemL2 PE=1 SV=1
Length = 429
Score = 28.9 bits (63), Expect = 9.5, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 1 MSAYKSVISTWSDPIAG-YIDNLYGPTGLVTGVQAGIIRCISNARHIKADMVPADYVVNA 59
++AYK I W D IA ++ + G G+V Q G + ++ H +V D V+ A
Sbjct: 187 INAYKEAIEFWGDEIAAVLVEPIVGNFGMVMP-QPGFLEEVNEISHNNGTLVIYDEVITA 245
Query: 60 L 60
Sbjct: 246 F 246
>sp|A6QI46|GSA2_STAAE Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Staphylococcus aureus
(strain Newman) GN=hemL2 PE=3 SV=1
Length = 429
Score = 28.9 bits (63), Expect = 9.5, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 1 MSAYKSVISTWSDPIAG-YIDNLYGPTGLVTGVQAGIIRCISNARHIKADMVPADYVVNA 59
++AYK I W D IA ++ + G G+V Q G + ++ H +V D V+ A
Sbjct: 187 INAYKEAIEFWGDEIAAVLVEPIVGNFGMVMP-QPGFLEEVNEISHNNGTLVIYDEVITA 245
Query: 60 L 60
Sbjct: 246 F 246
>sp|Q5HER0|GSA2_STAAC Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Staphylococcus aureus
(strain COL) GN=hemL2 PE=3 SV=1
Length = 429
Score = 28.9 bits (63), Expect = 9.5, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 1 MSAYKSVISTWSDPIAG-YIDNLYGPTGLVTGVQAGIIRCISNARHIKADMVPADYVVNA 59
++AYK I W D IA ++ + G G+V Q G + ++ H +V D V+ A
Sbjct: 187 INAYKEAIEFWGDEIAAVLVEPIVGNFGMVMP-QPGFLEEVNEISHNNGTLVIYDEVITA 245
Query: 60 L 60
Sbjct: 246 F 246
>sp|Q2YU22|GSA2_STAAB Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Staphylococcus aureus
(strain bovine RF122 / ET3-1) GN=hemL2 PE=3 SV=1
Length = 429
Score = 28.9 bits (63), Expect = 9.5, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 1 MSAYKSVISTWSDPIAG-YIDNLYGPTGLVTGVQAGIIRCISNARHIKADMVPADYVVNA 59
++AYK I W D IA ++ + G G+V Q G + ++ H +V D V+ A
Sbjct: 187 INAYKEAIEFWGDEIAAVLVEPIVGNFGMVMP-QPGFLEEVNEISHNNGTLVIYDEVITA 245
Query: 60 L 60
Sbjct: 246 F 246
>sp|A5IU30|GSA2_STAA9 Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Staphylococcus aureus
(strain JH9) GN=hemL2 PE=3 SV=1
Length = 429
Score = 28.9 bits (63), Expect = 9.5, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 1 MSAYKSVISTWSDPIAG-YIDNLYGPTGLVTGVQAGIIRCISNARHIKADMVPADYVVNA 59
++AYK I W D IA ++ + G G+V Q G + ++ H +V D V+ A
Sbjct: 187 INAYKEAIEFWGDEIAAVLVEPIVGNFGMVMP-QPGFLEEVNEISHNNGTLVIYDEVITA 245
Query: 60 L 60
Sbjct: 246 F 246
>sp|Q2G283|GSA2_STAA8 Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Staphylococcus aureus
(strain NCTC 8325) GN=hemL2 PE=3 SV=2
Length = 429
Score = 28.9 bits (63), Expect = 9.5, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 1 MSAYKSVISTWSDPIAG-YIDNLYGPTGLVTGVQAGIIRCISNARHIKADMVPADYVVNA 59
++AYK I W D IA ++ + G G+V Q G + ++ H +V D V+ A
Sbjct: 187 INAYKEAIEFWGDEIAAVLVEPIVGNFGMVMP-QPGFLEEVNEISHNNGTLVIYDEVITA 245
Query: 60 L 60
Sbjct: 246 F 246
>sp|Q2FFN1|GSA2_STAA3 Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Staphylococcus aureus
(strain USA300) GN=hemL2 PE=3 SV=1
Length = 429
Score = 28.9 bits (63), Expect = 9.5, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 1 MSAYKSVISTWSDPIAG-YIDNLYGPTGLVTGVQAGIIRCISNARHIKADMVPADYVVNA 59
++AYK I W D IA ++ + G G+V Q G + ++ H +V D V+ A
Sbjct: 187 INAYKEAIEFWGDEIAAVLVEPIVGNFGMVMP-QPGFLEEVNEISHNNGTLVIYDEVITA 245
Query: 60 L 60
Sbjct: 246 F 246
>sp|A6U2W8|GSA2_STAA2 Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Staphylococcus aureus
(strain JH1) GN=hemL2 PE=3 SV=1
Length = 429
Score = 28.9 bits (63), Expect = 9.5, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 1 MSAYKSVISTWSDPIAG-YIDNLYGPTGLVTGVQAGIIRCISNARHIKADMVPADYVVNA 59
++AYK I W D IA ++ + G G+V Q G + ++ H +V D V+ A
Sbjct: 187 INAYKEAIEFWGDEIAAVLVEPIVGNFGMVMP-QPGFLEEVNEISHNNGTLVIYDEVITA 245
Query: 60 L 60
Sbjct: 246 F 246
>sp|A7X3X9|GSA2_STAA1 Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Staphylococcus aureus
(strain Mu3 / ATCC 700698) GN=hemL2 PE=3 SV=1
Length = 429
Score = 28.9 bits (63), Expect = 9.5, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 1 MSAYKSVISTWSDPIAG-YIDNLYGPTGLVTGVQAGIIRCISNARHIKADMVPADYVVNA 59
++AYK I W D IA ++ + G G+V Q G + ++ H +V D V+ A
Sbjct: 187 INAYKEAIEFWGDEIAAVLVEPIVGNFGMVMP-QPGFLEEVNEISHNNGTLVIYDEVITA 245
Query: 60 L 60
Sbjct: 246 F 246
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.138 0.450
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,436,149
Number of Sequences: 539616
Number of extensions: 914920
Number of successful extensions: 1900
Number of sequences better than 100.0: 34
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 1882
Number of HSP's gapped (non-prelim): 34
length of query: 72
length of database: 191,569,459
effective HSP length: 44
effective length of query: 28
effective length of database: 167,826,355
effective search space: 4699137940
effective search space used: 4699137940
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)