Your job contains 1 sequence.
>psy13691
MAESLDDLNLPSAIIQRLIKEALPKDAEGKINVSKDVRLAAGKAASLFILHLTTEALSIA
NEKNRKTLSGVDVIEGVKQIGFEVIIEILGKSYNAAVSIKVVT
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy13691
(103 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-040426-1773 - symbol:pole3 "polymerase (DNA... 189 6.9e-15 1
FB|FBgn0043002 - symbol:Chrac-14 "Chromatin accessibility... 183 3.0e-14 1
UNIPROTKB|F1SN88 - symbol:POLE3 "Uncharacterized protein"... 182 3.8e-14 1
MGI|MGI:1933378 - symbol:Pole3 "polymerase (DNA directed)... 180 6.2e-14 1
UNIPROTKB|F1P2L0 - symbol:POLE3 "Uncharacterized protein"... 179 7.9e-14 1
UNIPROTKB|Q3SZN5 - symbol:POLE3 "DNA polymerase epsilon s... 179 7.9e-14 1
UNIPROTKB|J9P0Z6 - symbol:POLE3 "Uncharacterized protein"... 179 7.9e-14 1
UNIPROTKB|Q9NRF9 - symbol:POLE3 "DNA polymerase epsilon s... 179 7.9e-14 1
UNIPROTKB|Q5R4W3 - symbol:POLE3 "DNA polymerase epsilon s... 179 7.9e-14 1
RGD|1359475 - symbol:Pole3 "polymerase (DNA directed), ep... 179 7.9e-14 1
CGD|CAL0002303 - symbol:NCB2 species:5476 "Candida albica... 145 3.2e-10 1
UNIPROTKB|Q5A0I6 - symbol:NCB2 "Putative uncharacterized ... 145 3.2e-10 1
DICTYBASE|DDB_G0272222 - symbol:ybl1 "YB-like 1" species:... 136 2.9e-09 1
CGD|CAL0004533 - symbol:orf19.2088 species:5476 "Candida ... 135 8.5e-09 1
UNIPROTKB|Q5ACX9 - symbol:DPB4 "Putative uncharacterized ... 135 8.5e-09 1
ZFIN|ZDB-GENE-050306-25 - symbol:nfybb "nuclear transcrip... 127 2.6e-08 1
POMBASE|SPAC23C11.08 - symbol:php3 "CCAAT-binding factor ... 126 3.3e-08 1
ZFIN|ZDB-GENE-050417-13 - symbol:nfyba "nuclear transcrip... 126 3.3e-08 1
UNIPROTKB|E1C5G6 - symbol:NFYB "Nuclear transcription fac... 124 5.3e-08 1
UNIPROTKB|P25207 - symbol:NFYB "Nuclear transcription fac... 124 5.8e-08 1
UNIPROTKB|E2RDU1 - symbol:NFYB "Uncharacterized protein" ... 124 5.8e-08 1
UNIPROTKB|H7C5X4 - symbol:Nfyb "Nuclear transcription fac... 124 5.8e-08 1
UNIPROTKB|Q32KW0 - symbol:NFYB "Nuclear transcription fac... 124 6.1e-08 1
UNIPROTKB|P25208 - symbol:NFYB "Nuclear transcription fac... 124 6.1e-08 1
UNIPROTKB|F1SG36 - symbol:NFYB "Uncharacterized protein" ... 124 6.1e-08 1
MGI|MGI:97317 - symbol:Nfyb "nuclear transcription factor... 124 6.1e-08 1
RGD|3172 - symbol:Nfyb "nuclear transcription factor-Y be... 124 6.1e-08 1
UNIPROTKB|F1M6L1 - symbol:Nfyb "Nuclear transcription fac... 124 6.1e-08 1
POMBASE|SPBC3D6.09 - symbol:dpb4 "DNA polymerase epsilon ... 122 1.1e-07 1
TAIR|locus:2129885 - symbol:NF-YB3 ""nuclear factor Y, su... 118 2.3e-07 1
CGD|CAL0000086 - symbol:HAP31 species:5476 "Candida albic... 117 2.9e-07 1
UNIPROTKB|Q5ZMV3 - symbol:DR1 "Protein Dr1" species:9031 ... 117 2.9e-07 1
UNIPROTKB|Q2KJ19 - symbol:DR1 "Down-regulator of transcri... 117 2.9e-07 1
UNIPROTKB|E2RR45 - symbol:DR1 "Uncharacterized protein" s... 117 2.9e-07 1
UNIPROTKB|F8VSL3 - symbol:NFYB "Nuclear transcription fac... 117 2.9e-07 1
UNIPROTKB|Q01658 - symbol:DR1 "Protein Dr1" species:9606 ... 117 2.9e-07 1
UNIPROTKB|Q5A6N7 - symbol:HAP31 "Potential histone-like t... 117 2.9e-07 1
MGI|MGI:1100515 - symbol:Dr1 "down-regulator of transcrip... 117 2.9e-07 1
RGD|1305201 - symbol:Dr1 "down-regulator of transcription... 117 2.9e-07 1
TAIR|locus:2168983 - symbol:NF-YB2 ""nuclear factor Y, su... 117 2.9e-07 1
DICTYBASE|DDB_G0279419 - symbol:nfyB "putative histone-li... 126 3.1e-07 1
UNIPROTKB|F1S534 - symbol:DR1 "Uncharacterized protein" s... 116 3.8e-07 1
WB|WBGene00020823 - symbol:T26A5.8 species:6239 "Caenorha... 115 4.8e-07 1
UNIPROTKB|Q22798 - symbol:T26A5.8 "Protein T26A5.8" speci... 115 4.8e-07 1
ZFIN|ZDB-GENE-061013-797 - symbol:dr1 "down-regulator of ... 115 4.8e-07 1
TAIR|locus:2061789 - symbol:NF-YB8 ""nuclear factor Y, su... 114 6.1e-07 1
TAIR|locus:2036064 - symbol:NF-YB4 ""nuclear factor Y, su... 109 2.1e-06 1
TAIR|locus:2083941 - symbol:NF-YB10 ""nuclear factor Y, s... 109 2.1e-06 1
FB|FBgn0028926 - symbol:NC2beta "Negative Cofactor 2beta"... 109 2.2e-06 1
SGD|S000002528 - symbol:DPB4 "Subunit of DNA pol epsilon ... 110 2.2e-06 1
TAIR|locus:2054095 - symbol:NF-YB7 ""nuclear factor Y, su... 111 2.4e-06 1
ASPGD|ASPL0000055867 - symbol:AN9358 species:162425 "Emer... 107 3.4e-06 1
UNIPROTKB|G5EHZ6 - symbol:MGCH7_ch7g579 "Negative cofacto... 106 4.3e-06 1
DICTYBASE|DDB_G0269638 - symbol:dr1 "putative histone-lik... 106 4.4e-06 1
SGD|S000000117 - symbol:HAP3 "Subunit of the Hap2p/3p/4p/... 103 9.0e-06 1
TAIR|locus:2181529 - symbol:NF-YB12 ""nuclear factor Y, s... 103 9.0e-06 1
TAIR|locus:2178307 - symbol:NF-YB13 ""nuclear factor Y, s... 103 9.0e-06 1
ASPGD|ASPL0000061732 - symbol:AN1225 species:162425 "Emer... 108 1.1e-05 1
FB|FBgn0032816 - symbol:Nf-YB "Nuclear factor Y-box B" sp... 101 1.5e-05 1
TAIR|locus:2038648 - symbol:NF-YB11 ""nuclear factor Y, s... 105 2.2e-05 1
TAIR|locus:2043293 - symbol:NF-YB5 ""nuclear factor Y, su... 99 2.4e-05 1
UNIPROTKB|Q8W0W9 - symbol:Dr1 "Repressor protein" species... 105 2.5e-05 1
SGD|S000002805 - symbol:NCB2 "Subunit of a heterodimeric ... 97 3.9e-05 1
GENEDB_PFALCIPARUM|PF11_0477 - symbol:PF11_0477 "CCAAT-bo... 109 7.2e-05 1
POMBASE|SPBC30D10.02 - symbol:SPBC30D10.02 "transcription... 94 8.1e-05 1
SGD|S000005885 - symbol:HAP5 "Subunit of the Hap2p/3p/4p/... 92 0.00046 1
>ZFIN|ZDB-GENE-040426-1773 [details] [associations]
symbol:pole3 "polymerase (DNA directed), epsilon 3
(p17 subunit)" species:7955 "Danio rerio" [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808
ZFIN:ZDB-GENE-040426-1773 GO:GO:0005634 GO:GO:0043565
Gene3D:1.10.20.10 SUPFAM:SSF47113 eggNOG:COG2036 KO:K02326
CTD:54107 GeneTree:ENSGT00550000074689 HOGENOM:HOG000007701
HOVERGEN:HBG060262 OrthoDB:EOG4TB4CS OMA:TALAHKQ EMBL:CR925757
EMBL:CR855262 EMBL:BC059666 IPI:IPI00500787 RefSeq:NP_957095.1
UniGene:Dr.76881 STRING:Q6PBL4 Ensembl:ENSDART00000007512
GeneID:393774 KEGG:dre:393774 InParanoid:Q6PBL4 NextBio:20814771
Uniprot:Q6PBL4
Length = 148
Score = 189 (71.6 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 44/95 (46%), Positives = 66/95 (69%)
Query: 1 MAESLDDLNLPSAIIQRLIKEALPKDAEGKINVSKDVRLAAGKAASLFILHLTTEALSIA 60
MAE +DLNLP+A+I R+IKEALP EG +NVSK+ R A +AAS+F+L+ T+ A S A
Sbjct: 1 MAERPEDLNLPNAVITRIIKEALP---EG-VNVSKEARRAISQAASVFVLYATSCANSFA 56
Query: 61 NEKNRKTLSGVDVIEGVKQIGFEVIIEILGKSYNA 95
+ RKTL+ DV+ ++++ FE ++ L ++ A
Sbjct: 57 MKAKRKTLNAGDVMSAMEEMEFERFLQPLREALEA 91
>FB|FBgn0043002 [details] [associations]
symbol:Chrac-14 "Chromatin accessibility complex 14kD
protein" species:7227 "Drosophila melanogaster" [GO:0008623 "CHRAC"
evidence=IDA;NAS] [GO:0046982 "protein heterodimerization activity"
evidence=IPI] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=IDA] [GO:0016573 "histone acetylation"
evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] InterPro:IPR003958 InterPro:IPR009072
Pfam:PF00808 EMBL:AE014134 GO:GO:0043565 GO:GO:0006974
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0005671 GO:GO:0042766
GO:GO:0008623 eggNOG:NOG150487 KO:K02326
GeneTree:ENSGT00550000074689 OMA:TALAHKQ UniGene:Dm.3099
EMBL:AY070970 EMBL:AJ271141 RefSeq:NP_476646.2 RefSeq:NP_476647.2
PDB:2BYK PDB:2BYM PDBsum:2BYK PDBsum:2BYM SMR:Q9V444 IntAct:Q9V444
MINT:MINT-781706 STRING:Q9V444 EnsemblMetazoa:FBtr0100267
EnsemblMetazoa:FBtr0100268 GeneID:3772329 KEGG:dme:Dmel_CG13399
UCSC:CG13399-RA CTD:3772329 FlyBase:FBgn0043002 InParanoid:Q9V444
OrthoDB:EOG4RN8S4 EvolutionaryTrace:Q9V444 GenomeRNAi:3772329
NextBio:853337 Uniprot:Q9V444
Length = 128
Score = 183 (69.5 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 36/89 (40%), Positives = 63/89 (70%)
Query: 1 MAESLDDLNLPSAIIQRLIKEALPKDAEGKINVSKDVRLAAGKAASLFILHLTTEALSIA 60
M E ++DLNLP+A+I RLIKEALP+ A +VSK+ R A +AAS+F + +T+ + ++A
Sbjct: 1 MVERIEDLNLPNAVIGRLIKEALPESA----SVSKEARAAIARAASVFAIFVTSSSTALA 56
Query: 61 NEKNRKTLSGVDVIEGVKQIGFEVIIEIL 89
+++N KT++ D+++ + ++ FE + L
Sbjct: 57 HKQNHKTITAKDILQTLTELDFESFVPSL 85
>UNIPROTKB|F1SN88 [details] [associations]
symbol:POLE3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0008622 "epsilon DNA polymerase complex" evidence=IEA]
[GO:0005671 "Ada2/Gcn5/Ada3 transcription activator complex"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808
GO:GO:0043565 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0005671
GO:GO:0043966 KO:K02326 GeneTree:ENSGT00550000074689 OMA:NDSGGHK
EMBL:FP102008 RefSeq:XP_003122132.1 UniGene:Ssc.2548
Ensembl:ENSSSCT00000006024 GeneID:100517450 KEGG:ssc:100517450
Uniprot:F1SN88
Length = 147
Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 41/95 (43%), Positives = 65/95 (68%)
Query: 1 MAESLDDLNLPSAIIQRLIKEALPKDAEGKINVSKDVRLAAGKAASLFILHLTTEALSIA 60
MAE +DLNLP+A+I R+IKEALP EG +N+SK+ R A +AAS+F+L+ T+ A + A
Sbjct: 1 MAERPEDLNLPNAVITRIIKEALP---EG-VNISKEARSAISRAASVFVLYATSCANNFA 56
Query: 61 NEKNRKTLSGVDVIEGVKQIGFEVIIEILGKSYNA 95
+ RKTL+ DV+ ++++ F+ + L ++ A
Sbjct: 57 MKGKRKTLNASDVLSAMEEMEFQRFVTPLKEALEA 91
>MGI|MGI:1933378 [details] [associations]
symbol:Pole3 "polymerase (DNA directed), epsilon 3 (p17
subunit)" species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=ISO] [GO:0008622 "epsilon DNA polymerase complex"
evidence=ISO] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=ISO] [GO:0046982
"protein heterodimerization activity" evidence=IEA]
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 MGI:MGI:1933378
GO:GO:0043565 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0005671
GO:GO:0043966 eggNOG:COG2036 GO:GO:0008622 GO:GO:0003887 KO:K02326
CTD:54107 GeneTree:ENSGT00550000074689 HOGENOM:HOG000007701
HOVERGEN:HBG060262 OrthoDB:EOG4TB4CS EMBL:AF230806 EMBL:BC024996
IPI:IPI00123264 RefSeq:NP_067473.2 UniGene:Mm.27444
ProteinModelPortal:Q9JKP7 SMR:Q9JKP7 STRING:Q9JKP7
PhosphoSite:Q9JKP7 PaxDb:Q9JKP7 PRIDE:Q9JKP7
Ensembl:ENSMUST00000030091 GeneID:59001 KEGG:mmu:59001
UCSC:uc008tfb.1 InParanoid:Q9JKP7 NextBio:314514 Bgee:Q9JKP7
Genevestigator:Q9JKP7 GermOnline:ENSMUSG00000028394 Uniprot:Q9JKP7
Length = 145
Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 41/95 (43%), Positives = 65/95 (68%)
Query: 1 MAESLDDLNLPSAIIQRLIKEALPKDAEGKINVSKDVRLAAGKAASLFILHLTTEALSIA 60
MAE +DLNLP+A+I R+IKEALP +G +N+SK+ R A +AAS+F+L+ T+ A + A
Sbjct: 1 MAERPEDLNLPNAVITRIIKEALP---DG-VNISKEARSAISRAASVFVLYATSCANNFA 56
Query: 61 NEKNRKTLSGVDVIEGVKQIGFEVIIEILGKSYNA 95
+ RKTL+ DV+ ++++ F+ I L ++ A
Sbjct: 57 MKGKRKTLNASDVLSAMEEMEFQRFITPLKEALEA 91
>UNIPROTKB|F1P2L0 [details] [associations]
symbol:POLE3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0005671 "Ada2/Gcn5/Ada3 transcription activator complex"
evidence=IEA] [GO:0008622 "epsilon DNA polymerase complex"
evidence=IEA] [GO:0043966 "histone H3 acetylation" evidence=IEA]
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 GO:GO:0043565
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0005671 GO:GO:0043966
KO:K02326 CTD:54107 GeneTree:ENSGT00550000074689 OMA:TALAHKQ
EMBL:AADN02026940 IPI:IPI00819486 RefSeq:NP_001020525.2
UniGene:Gga.5487 Ensembl:ENSGALT00000040353 GeneID:417275
KEGG:gga:417275 NextBio:20820605 Uniprot:F1P2L0
Length = 143
Score = 179 (68.1 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 41/92 (44%), Positives = 64/92 (69%)
Query: 1 MAESLDDLNLPSAIIQRLIKEALPKDAEGKINVSKDVRLAAGKAASLFILHLTTEALSIA 60
MAE +DLNLP+A+I R+IKEALP +G +N+SK+ R A +AAS+F+L+ T+ A + A
Sbjct: 1 MAERPEDLNLPNAVITRIIKEALP---DG-VNISKEARSAISRAASVFVLYATSCANNFA 56
Query: 61 NEKNRKTLSGVDVIEGVKQIGFEVIIEILGKS 92
+ RKTL+ DV+ ++++ F+ I L +S
Sbjct: 57 MKGKRKTLNAGDVLSAMEEMEFQRFIAPLKES 88
>UNIPROTKB|Q3SZN5 [details] [associations]
symbol:POLE3 "DNA polymerase epsilon subunit 3"
species:9913 "Bos taurus" [GO:0008622 "epsilon DNA polymerase
complex" evidence=ISS] [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808
GO:GO:0043565 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0005671
GO:GO:0043966 eggNOG:COG2036 GO:GO:0008622 GO:GO:0003887 KO:K02326
EMBL:BT030577 EMBL:BC102772 IPI:IPI00716318 RefSeq:NP_001029562.1
UniGene:Bt.27905 HSSP:Q9V444 ProteinModelPortal:Q3SZN5 SMR:Q3SZN5
STRING:Q3SZN5 PRIDE:Q3SZN5 Ensembl:ENSBTAT00000000316 GeneID:510678
KEGG:bta:510678 CTD:54107 GeneTree:ENSGT00550000074689
HOGENOM:HOG000007701 HOVERGEN:HBG060262 InParanoid:Q3SZN5
OMA:NDSGGHK OrthoDB:EOG4TB4CS NextBio:20869563 Uniprot:Q3SZN5
Length = 147
Score = 179 (68.1 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 40/95 (42%), Positives = 65/95 (68%)
Query: 1 MAESLDDLNLPSAIIQRLIKEALPKDAEGKINVSKDVRLAAGKAASLFILHLTTEALSIA 60
MAE +DLNLP+A+I R+IKEALP +G +N+SK+ R A +AAS+F+L+ T+ A + A
Sbjct: 1 MAERPEDLNLPNAVITRIIKEALP---DG-VNISKEARSAISRAASVFVLYATSCANNFA 56
Query: 61 NEKNRKTLSGVDVIEGVKQIGFEVIIEILGKSYNA 95
+ RKTL+ DV+ ++++ F+ + L ++ A
Sbjct: 57 MKGKRKTLNASDVLSAMEEMEFQRFVTPLKEALEA 91
>UNIPROTKB|J9P0Z6 [details] [associations]
symbol:POLE3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR003958
InterPro:IPR009072 Pfam:PF00808 GO:GO:0005634 GO:GO:0043565
Gene3D:1.10.20.10 SUPFAM:SSF47113 KO:K02326 CTD:54107
GeneTree:ENSGT00550000074689 OMA:TALAHKQ EMBL:AAEX03008085
RefSeq:XP_855374.2 Ensembl:ENSCAFT00000047307 GeneID:612550
KEGG:cfa:612550 Uniprot:J9P0Z6
Length = 147
Score = 179 (68.1 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 40/95 (42%), Positives = 65/95 (68%)
Query: 1 MAESLDDLNLPSAIIQRLIKEALPKDAEGKINVSKDVRLAAGKAASLFILHLTTEALSIA 60
MAE +DLNLP+A+I R+IKEALP +G +N+SK+ R A +AAS+F+L+ T+ A + A
Sbjct: 1 MAERPEDLNLPNAVITRIIKEALP---DG-VNISKEARSAISRAASVFVLYATSCANNFA 56
Query: 61 NEKNRKTLSGVDVIEGVKQIGFEVIIEILGKSYNA 95
+ RKTL+ DV+ ++++ F+ + L ++ A
Sbjct: 57 MKGKRKTLNASDVLSAMEEMEFQRFVTPLKEALEA 91
>UNIPROTKB|Q9NRF9 [details] [associations]
symbol:POLE3 "DNA polymerase epsilon subunit 3"
species:9606 "Homo sapiens" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA] [GO:0008622 "epsilon DNA polymerase
complex" evidence=IDA] [GO:0005634 "nucleus" evidence=TAS]
[GO:0006260 "DNA replication" evidence=TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0043966 "histone H3 acetylation"
evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IDA] InterPro:IPR003958 InterPro:IPR009072
Pfam:PF00808 GO:GO:0006260 GO:GO:0043565 Gene3D:1.10.20.10
SUPFAM:SSF47113 GO:GO:0005671 GO:GO:0043966 EMBL:AL137066
eggNOG:COG2036 GO:GO:0008622 GO:GO:0003887 KO:K02326 CTD:54107
HOGENOM:HOG000007701 HOVERGEN:HBG060262 OMA:NDSGGHK
OrthoDB:EOG4TB4CS EMBL:AF226077 EMBL:AF261689 EMBL:AY720898
EMBL:AK074629 EMBL:AK074762 EMBL:AK074782 EMBL:DQ072116
EMBL:BC003166 EMBL:BC004170 IPI:IPI00010141 RefSeq:NP_059139.3
UniGene:Hs.108112 ProteinModelPortal:Q9NRF9 SMR:Q9NRF9
IntAct:Q9NRF9 MINT:MINT-1439872 STRING:Q9NRF9 PhosphoSite:Q9NRF9
DMDM:22653710 PaxDb:Q9NRF9 PeptideAtlas:Q9NRF9 PRIDE:Q9NRF9
Ensembl:ENST00000374169 Ensembl:ENST00000374171 GeneID:54107
KEGG:hsa:54107 UCSC:uc004bhn.2 GeneCards:GC09M116169
HGNC:HGNC:13546 HPA:HPA047945 MIM:607267 neXtProt:NX_Q9NRF9
PharmGKB:PA33499 InParanoid:Q9NRF9 PhylomeDB:Q9NRF9 ChiTaRS:POLE3
GenomeRNAi:54107 NextBio:56470 Bgee:Q9NRF9 CleanEx:HS_POLE3
Genevestigator:Q9NRF9 GermOnline:ENSG00000148229 Uniprot:Q9NRF9
Length = 147
Score = 179 (68.1 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 40/95 (42%), Positives = 65/95 (68%)
Query: 1 MAESLDDLNLPSAIIQRLIKEALPKDAEGKINVSKDVRLAAGKAASLFILHLTTEALSIA 60
MAE +DLNLP+A+I R+IKEALP +G +N+SK+ R A +AAS+F+L+ T+ A + A
Sbjct: 1 MAERPEDLNLPNAVITRIIKEALP---DG-VNISKEARSAISRAASVFVLYATSCANNFA 56
Query: 61 NEKNRKTLSGVDVIEGVKQIGFEVIIEILGKSYNA 95
+ RKTL+ DV+ ++++ F+ + L ++ A
Sbjct: 57 MKGKRKTLNASDVLSAMEEMEFQRFVTPLKEALEA 91
>UNIPROTKB|Q5R4W3 [details] [associations]
symbol:POLE3 "DNA polymerase epsilon subunit 3"
species:9601 "Pongo abelii" [GO:0008622 "epsilon DNA polymerase
complex" evidence=ISS] InterPro:IPR003958 InterPro:IPR009072
Pfam:PF00808 GO:GO:0043565 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0005671 GO:GO:0043966 GO:GO:0008622 GO:GO:0003887 KO:K02326
CTD:54107 GeneTree:ENSGT00550000074689 HOVERGEN:HBG060262
OMA:NDSGGHK EMBL:CR861128 RefSeq:NP_001126884.1 UniGene:Pab.18535
ProteinModelPortal:Q5R4W3 SMR:Q5R4W3 PRIDE:Q5R4W3
Ensembl:ENSPPYT00000022775 GeneID:100173898 KEGG:pon:100173898
InParanoid:Q5R4W3 Uniprot:Q5R4W3
Length = 147
Score = 179 (68.1 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 40/95 (42%), Positives = 65/95 (68%)
Query: 1 MAESLDDLNLPSAIIQRLIKEALPKDAEGKINVSKDVRLAAGKAASLFILHLTTEALSIA 60
MAE +DLNLP+A+I R+IKEALP +G +N+SK+ R A +AAS+F+L+ T+ A + A
Sbjct: 1 MAERPEDLNLPNAVITRIIKEALP---DG-VNISKEARSAISRAASVFVLYATSCANNFA 56
Query: 61 NEKNRKTLSGVDVIEGVKQIGFEVIIEILGKSYNA 95
+ RKTL+ DV+ ++++ F+ + L ++ A
Sbjct: 57 MKGKRKTLNASDVLSAMEEMEFQRFVTPLKEALEA 91
>RGD|1359475 [details] [associations]
symbol:Pole3 "polymerase (DNA directed), epsilon 3, accessory
subunit" species:10116 "Rattus norvegicus" [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=ISO]
[GO:0008622 "epsilon DNA polymerase complex" evidence=ISO;ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=ISO] [GO:0046982
"protein heterodimerization activity" evidence=IEA]
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 RGD:1359475
GO:GO:0043565 Gene3D:1.10.20.10 SUPFAM:SSF47113 eggNOG:COG2036
GO:GO:0008622 GO:GO:0003887 KO:K02326 CTD:54107
GeneTree:ENSGT00550000074689 HOGENOM:HOG000007701
HOVERGEN:HBG060262 OMA:NDSGGHK OrthoDB:EOG4TB4CS EMBL:BC081988
EMBL:BC083800 IPI:IPI00208715 RefSeq:NP_001007653.1
RefSeq:XP_002726991.1 RefSeq:XP_002729875.1 UniGene:Rn.3290
ProteinModelPortal:Q642A5 STRING:Q642A5 PRIDE:Q642A5
Ensembl:ENSRNOT00000006416 Ensembl:ENSRNOT00000020722
GeneID:100362333 GeneID:298098 KEGG:rno:100362333 KEGG:rno:298098
UCSC:RGD:1359475 InParanoid:Q642A5 NextBio:643156
Genevestigator:Q642A5 GermOnline:ENSRNOG00000004843
GermOnline:ENSRNOG00000015392 Uniprot:Q642A5
Length = 145
Score = 179 (68.1 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 40/95 (42%), Positives = 65/95 (68%)
Query: 1 MAESLDDLNLPSAIIQRLIKEALPKDAEGKINVSKDVRLAAGKAASLFILHLTTEALSIA 60
MAE +DLNLP+A+I R+IKEALP +G +N+SK+ R A +AAS+F+L+ T+ A + A
Sbjct: 1 MAERPEDLNLPNAVITRIIKEALP---DG-VNISKEARSAISRAASVFVLYATSCANNFA 56
Query: 61 NEKNRKTLSGVDVIEGVKQIGFEVIIEILGKSYNA 95
+ RKTL+ DV+ ++++ F+ + L ++ A
Sbjct: 57 MKGKRKTLNASDVLSAMEEMEFQRFVTPLKEALEA 91
>CGD|CAL0002303 [details] [associations]
symbol:NCB2 species:5476 "Candida albicans" [GO:0003713
"transcription coactivator activity" evidence=IMP] [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0005829 "cytosol"
evidence=IEA] [GO:0017054 "negative cofactor 2 complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] InterPro:IPR003958 InterPro:IPR009072
InterPro:IPR027113 Pfam:PF00808 CGD:CAL0002303 GO:GO:0005634
GO:GO:0043565 GO:GO:0003713 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0035690 EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG5150
PANTHER:PTHR11064:SF8 RefSeq:XP_715301.1 RefSeq:XP_715366.1
ProteinModelPortal:Q5A0I6 STRING:Q5A0I6 GeneID:3643028
GeneID:3643067 KEGG:cal:CaO19.13247 KEGG:cal:CaO19.5825
Uniprot:Q5A0I6
Length = 149
Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 28/86 (32%), Positives = 58/86 (67%)
Query: 6 DDLNLPSAIIQRLIKEALPKDAEGKINVSKDVRLAAGKAASLFILHLTTEALSIANEKNR 65
+DL+LP A +Q++I E LPKD I ++K+ R A + + FI+ L+T++ IA ++ +
Sbjct: 10 EDLSLPKATVQKIINEILPKD----IGIAKEAREAITECSIEFIMMLSTQSNDIAEKEAK 65
Query: 66 KTLSGVDVIEGVKQIGFEVIIEILGK 91
KT++ V++ ++++ F++ ++I+ K
Sbjct: 66 KTIASDHVVKALEELDFKIYLDIINK 91
>UNIPROTKB|Q5A0I6 [details] [associations]
symbol:NCB2 "Putative uncharacterized protein NCB2"
species:237561 "Candida albicans SC5314" [GO:0003713 "transcription
coactivator activity" evidence=IMP] [GO:0035690 "cellular response
to drug" evidence=IMP] InterPro:IPR003958 InterPro:IPR009072
InterPro:IPR027113 Pfam:PF00808 CGD:CAL0002303 GO:GO:0005634
GO:GO:0043565 GO:GO:0003713 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0035690 EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG5150
PANTHER:PTHR11064:SF8 RefSeq:XP_715301.1 RefSeq:XP_715366.1
ProteinModelPortal:Q5A0I6 STRING:Q5A0I6 GeneID:3643028
GeneID:3643067 KEGG:cal:CaO19.13247 KEGG:cal:CaO19.5825
Uniprot:Q5A0I6
Length = 149
Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 28/86 (32%), Positives = 58/86 (67%)
Query: 6 DDLNLPSAIIQRLIKEALPKDAEGKINVSKDVRLAAGKAASLFILHLTTEALSIANEKNR 65
+DL+LP A +Q++I E LPKD I ++K+ R A + + FI+ L+T++ IA ++ +
Sbjct: 10 EDLSLPKATVQKIINEILPKD----IGIAKEAREAITECSIEFIMMLSTQSNDIAEKEAK 65
Query: 66 KTLSGVDVIEGVKQIGFEVIIEILGK 91
KT++ V++ ++++ F++ ++I+ K
Sbjct: 66 KTIASDHVVKALEELDFKIYLDIINK 91
>DICTYBASE|DDB_G0272222 [details] [associations]
symbol:ybl1 "YB-like 1" species:44689 "Dictyostelium
discoideum" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808
dictyBase:DDB_G0272222 GO:GO:0005634 GO:GO:0043565
GenomeReviews:CM000151_GR Gene3D:1.10.20.10 SUPFAM:SSF47113
EMBL:AAFI02000008 GO:GO:0003887 eggNOG:NOG150487 KO:K02326
HSSP:Q9V444 RefSeq:XP_645298.1 ProteinModelPortal:Q75JQ9
STRING:Q75JQ9 EnsemblProtists:DDB0216318 GeneID:8618464
KEGG:ddi:DDB_G0272222 OMA:TALAHKQ Uniprot:Q75JQ9
Length = 138
Score = 136 (52.9 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 33/83 (39%), Positives = 52/83 (62%)
Query: 1 MAESLDDLNLPSAIIQRLIKEALPKDAEGKINVSKDVRLAAGKAASLFILHLTTEALSIA 60
M+ES D LP AI+ R+IK +LP EG + +K+ RLA KAA ++I +LT ++ +
Sbjct: 1 MSESQD---LPGAIVNRIIKASLP---EGVL-CAKESRLAIAKAAKVWIHYLTAASIDFS 53
Query: 61 NEKNRKTLSGVDVIEGVKQIGFE 83
+ R T+S DV + +++I FE
Sbjct: 54 SHSGRSTISPKDVFQAIEEIDFE 76
>CGD|CAL0004533 [details] [associations]
symbol:orf19.2088 species:5476 "Candida albicans" [GO:0030447
"filamentous growth" evidence=IMP] [GO:0008623 "CHRAC"
evidence=IEA] [GO:0008622 "epsilon DNA polymerase complex"
evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0006272 "leading strand elongation" evidence=IEA]
[GO:0006273 "lagging strand elongation" evidence=IEA] [GO:0006348
"chromatin silencing at telomere" evidence=IEA] InterPro:IPR003958
InterPro:IPR009072 Pfam:PF00808 CGD:CAL0004533 GO:GO:0005634
GO:GO:0043565 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0030447
EMBL:AACQ01000031 EMBL:AACQ01000030 eggNOG:NOG150487 KO:K02326
RefSeq:XP_719534.1 RefSeq:XP_719658.1 ProteinModelPortal:Q5ACX9
STRING:Q5ACX9 GeneID:3638739 GeneID:3638818 KEGG:cal:CaO19.2088
KEGG:cal:CaO19.9635 Uniprot:Q5ACX9
Length = 261
Score = 135 (52.6 bits), Expect = 8.5e-09, P = 8.5e-09
Identities = 29/85 (34%), Positives = 50/85 (58%)
Query: 4 SLDDLNLPSAIIQRLIKEALPKDAE--GKINVSKDVRLAAGKAASLFILHLTTEALSIAN 61
S+DD+ P IQ+L K + D G++ ++KD LA ++A++F+ HL +A I+
Sbjct: 26 SIDDILFPRTTIQKLAKNIISDDENNAGQMTIAKDSLLALQRSATVFVSHLLFQAKQISK 85
Query: 62 EKNRKTLSGVDVIEGVKQIGFEVII 86
E NRKT+S D++ +++ F I
Sbjct: 86 EANRKTVSAQDMLAALERAEFSGFI 110
>UNIPROTKB|Q5ACX9 [details] [associations]
symbol:DPB4 "Putative uncharacterized protein DPB4"
species:237561 "Candida albicans SC5314" [GO:0030447 "filamentous
growth" evidence=IMP] InterPro:IPR003958 InterPro:IPR009072
Pfam:PF00808 CGD:CAL0004533 GO:GO:0005634 GO:GO:0043565
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0030447 EMBL:AACQ01000031
EMBL:AACQ01000030 eggNOG:NOG150487 KO:K02326 RefSeq:XP_719534.1
RefSeq:XP_719658.1 ProteinModelPortal:Q5ACX9 STRING:Q5ACX9
GeneID:3638739 GeneID:3638818 KEGG:cal:CaO19.2088
KEGG:cal:CaO19.9635 Uniprot:Q5ACX9
Length = 261
Score = 135 (52.6 bits), Expect = 8.5e-09, P = 8.5e-09
Identities = 29/85 (34%), Positives = 50/85 (58%)
Query: 4 SLDDLNLPSAIIQRLIKEALPKDAE--GKINVSKDVRLAAGKAASLFILHLTTEALSIAN 61
S+DD+ P IQ+L K + D G++ ++KD LA ++A++F+ HL +A I+
Sbjct: 26 SIDDILFPRTTIQKLAKNIISDDENNAGQMTIAKDSLLALQRSATVFVSHLLFQAKQISK 85
Query: 62 EKNRKTLSGVDVIEGVKQIGFEVII 86
E NRKT+S D++ +++ F I
Sbjct: 86 EANRKTVSAQDMLAALERAEFSGFI 110
>ZFIN|ZDB-GENE-050306-25 [details] [associations]
symbol:nfybb "nuclear transcription factor Y, beta
b" species:7955 "Danio rerio" [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR003956
InterPro:IPR003957 InterPro:IPR003958 InterPro:IPR009072
Pfam:PF00808 PRINTS:PR00615 PROSITE:PS00685 ZFIN:ZDB-GENE-050306-25
GO:GO:0005634 GO:GO:0006355 GO:GO:0043565 Gene3D:1.10.20.10
SUPFAM:SSF47113 eggNOG:COG2036 GeneTree:ENSGT00550000074689
HOGENOM:HOG000211832 PANTHER:PTHR11064:SF9 HOVERGEN:HBG008864
KO:K08065 OrthoDB:EOG4D52ZM EMBL:BX323444 EMBL:BC090693
IPI:IPI00512171 RefSeq:NP_001013340.1 UniGene:Dr.151645 SMR:Q5CZV3
STRING:Q5CZV3 Ensembl:ENSDART00000067072 GeneID:503744
KEGG:dre:503744 CTD:503744 InParanoid:Q5CZV3 NextBio:20866288
Uniprot:Q5CZV3
Length = 205
Score = 127 (49.8 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 30/87 (34%), Positives = 53/87 (60%)
Query: 7 DLNLPSAIIQRLIKEALPKDAEGKINVSKDVRLAAGKAASLFILHLTTEALSIANEKNRK 66
D+ LP A + R++K A+P+ GKI +KD + + S FI +T+EA +++ RK
Sbjct: 55 DIYLPIANVARIMKNAIPQT--GKI--AKDAKECVQECVSEFISFITSEASERCHQEKRK 110
Query: 67 TLSGVDVIEGVKQIGFEVIIEILGKSY 93
T++G D++ + +GF++ +E L K Y
Sbjct: 111 TINGEDILFAMSTLGFDMYVEPL-KLY 136
>POMBASE|SPAC23C11.08 [details] [associations]
symbol:php3 "CCAAT-binding factor complex subunit Php3"
species:4896 "Schizosaccharomyces pombe" [GO:0000785 "chromatin"
evidence=NAS] [GO:0000978 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding" evidence=ISO;TAS] [GO:0001077
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding transcription factor activity involved in positive
regulation of transcription" evidence=IC] [GO:0005634 "nucleus"
evidence=ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0016602 "CCAAT-binding
factor complex" evidence=ISO] [GO:0031670 "cellular response to
nutrient" evidence=IC] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:1900402 "regulation of carbohydrate
metabolic process by regulation of transcription from RNA
polymerase II promoter" evidence=ISO] InterPro:IPR003956
InterPro:IPR003957 InterPro:IPR003958 InterPro:IPR009072
Pfam:PF00808 PRINTS:PR00615 PROSITE:PS00685 PomBase:SPAC23C11.08
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0000785 GO:GO:0000978
GO:GO:0001077 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0031670
eggNOG:COG2036 GO:GO:0016602 EMBL:X75072 PIR:S42744
RefSeq:NP_593639.1 ProteinModelPortal:P36611 SMR:P36611
STRING:P36611 EnsemblFungi:SPAC23C11.08.1 GeneID:2542027
KEGG:spo:SPAC23C11.08 HOGENOM:HOG000211832 OMA:XDEDEER
OrthoDB:EOG4N33Z8 NextBio:20803105 GO:GO:1900402
PANTHER:PTHR11064:SF9 Uniprot:P36611
Length = 116
Score = 126 (49.4 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 32/89 (35%), Positives = 51/89 (57%)
Query: 2 AESLDDLNL-PSAIIQRLIKEALPKDAEGKINVSKDVRLAAGKAASLFILHLTTEALSIA 60
A+ LD NL P A + R++K ALP++A+ +SK+ + S FI +T EA
Sbjct: 3 ADGLDYTNLLPIANVARIMKSALPENAK----ISKEAKDCVQDCVSEFISFVTGEASEQC 58
Query: 61 NEKNRKTLSGVDVIEGVKQIGFEVIIEIL 89
++ RKT++G DV+ + +GFE E+L
Sbjct: 59 TQEKRKTITGEDVLLALNTLGFENYAEVL 87
>ZFIN|ZDB-GENE-050417-13 [details] [associations]
symbol:nfyba "nuclear transcription factor Y, beta
a" species:7955 "Danio rerio" [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR003956
InterPro:IPR003957 InterPro:IPR003958 InterPro:IPR009072
Pfam:PF00808 PRINTS:PR00615 PROSITE:PS00685 ZFIN:ZDB-GENE-050417-13
GO:GO:0005634 GO:GO:0006355 GO:GO:0043565 Gene3D:1.10.20.10
SUPFAM:SSF47113 eggNOG:COG2036 GeneTree:ENSGT00550000074689
HOGENOM:HOG000211832 PANTHER:PTHR11064:SF9 HOVERGEN:HBG008864
KO:K08065 OrthoDB:EOG4D52ZM EMBL:FP236856 EMBL:BC092926
IPI:IPI00490399 RefSeq:NP_001017565.1 UniGene:Dr.31402 SMR:Q561X4
Ensembl:ENSDART00000057254 GeneID:550227 KEGG:dre:550227 CTD:550227
InParanoid:Q561X4 OMA:IPQTGKX NextBio:20879490 Uniprot:Q561X4
Length = 204
Score = 126 (49.4 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 30/87 (34%), Positives = 53/87 (60%)
Query: 7 DLNLPSAIIQRLIKEALPKDAEGKINVSKDVRLAAGKAASLFILHLTTEALSIANEKNRK 66
D+ LP A + R++K A+P+ GKI +KD + + S FI +T+EA +++ RK
Sbjct: 54 DIYLPIANVARIMKNAVPQT--GKI--AKDAKECVQECVSEFISFITSEASERCHQEKRK 109
Query: 67 TLSGVDVIEGVKQIGFEVIIEILGKSY 93
T++G D++ + +GF++ +E L K Y
Sbjct: 110 TINGEDILFAMSTLGFDMYVEPL-KLY 135
>UNIPROTKB|E1C5G6 [details] [associations]
symbol:NFYB "Nuclear transcription factor Y subunit beta"
species:9031 "Gallus gallus" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0016602
"CCAAT-binding factor complex" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0070491 "repressing transcription factor binding" evidence=IEA]
InterPro:IPR003956 InterPro:IPR003957 InterPro:IPR003958
InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615 PROSITE:PS00685
GO:GO:0045893 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.20.10
SUPFAM:SSF47113 GeneTree:ENSGT00550000074689 GO:GO:0016602
PANTHER:PTHR11064:SF9 EMBL:AADN02006311 EMBL:AADN02006310
IPI:IPI00596965 Ensembl:ENSGALT00000037650 ArrayExpress:E1C5G6
Uniprot:E1C5G6
Length = 152
Score = 124 (48.7 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 30/87 (34%), Positives = 52/87 (59%)
Query: 7 DLNLPSAIIQRLIKEALPKDAEGKINVSKDVRLAAGKAASLFILHLTTEALSIANEKNRK 66
D+ LP A + R++K A+P+ GKI +KD + + S FI +T+EA +++ RK
Sbjct: 54 DIYLPIANVARIMKNAIPQT--GKI--AKDAKECVQECVSEFISFITSEASERCHQEKRK 109
Query: 67 TLSGVDVIEGVKQIGFEVIIEILGKSY 93
T++G D++ + +GF+ +E L K Y
Sbjct: 110 TINGEDILFAMSTLGFDSYVEPL-KLY 135
>UNIPROTKB|P25207 [details] [associations]
symbol:NFYB "Nuclear transcription factor Y subunit beta"
species:9031 "Gallus gallus" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0016602
"CCAAT-binding factor complex" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0070491 "repressing transcription factor binding" evidence=IEA]
InterPro:IPR003956 InterPro:IPR003957 InterPro:IPR003958
InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615 PROSITE:PS00685
GO:GO:0045893 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.20.10 SUPFAM:SSF47113 eggNOG:COG2036
GeneTree:ENSGT00550000074689 GO:GO:0016602 HOGENOM:HOG000211832
PANTHER:PTHR11064:SF9 CTD:4801 HOVERGEN:HBG008864 KO:K08065
OMA:KENFREQ OrthoDB:EOG4D52ZM EMBL:AJ719889 EMBL:X59713
IPI:IPI00820911 PIR:S24469 RefSeq:NP_990600.1 UniGene:Gga.1264
ProteinModelPortal:P25207 SMR:P25207 STRING:P25207
Ensembl:ENSGALT00000020762 Ensembl:ENSGALT00000037651 GeneID:396205
KEGG:gga:396205 InParanoid:P25207 NextBio:20816257
ArrayExpress:P25207 Uniprot:P25207
Length = 205
Score = 124 (48.7 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 30/87 (34%), Positives = 52/87 (59%)
Query: 7 DLNLPSAIIQRLIKEALPKDAEGKINVSKDVRLAAGKAASLFILHLTTEALSIANEKNRK 66
D+ LP A + R++K A+P+ GKI +KD + + S FI +T+EA +++ RK
Sbjct: 54 DIYLPIANVARIMKNAIPQT--GKI--AKDAKECVQECVSEFISFITSEASERCHQEKRK 109
Query: 67 TLSGVDVIEGVKQIGFEVIIEILGKSY 93
T++G D++ + +GF+ +E L K Y
Sbjct: 110 TINGEDILFAMSTLGFDSYVEPL-KLY 135
>UNIPROTKB|E2RDU1 [details] [associations]
symbol:NFYB "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070491 "repressing transcription factor
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016602
"CCAAT-binding factor complex" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR003956 InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
PROSITE:PS00685 GO:GO:0045893 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.20.10 SUPFAM:SSF47113 GeneTree:ENSGT00550000074689
GO:GO:0016602 PANTHER:PTHR11064:SF9 CTD:4801 KO:K08065 OMA:KENFREQ
EMBL:AAEX03009996 RefSeq:XP_003432091.1 Ensembl:ENSCAFT00000050062
GeneID:475450 KEGG:cfa:475450 NextBio:20851292 Uniprot:E2RDU1
Length = 205
Score = 124 (48.7 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 30/87 (34%), Positives = 52/87 (59%)
Query: 7 DLNLPSAIIQRLIKEALPKDAEGKINVSKDVRLAAGKAASLFILHLTTEALSIANEKNRK 66
D+ LP A + R++K A+P+ GKI +KD + + S FI +T+EA +++ RK
Sbjct: 54 DIYLPIANVARIMKNAIPQT--GKI--AKDAKECVQECVSEFISFITSEASERCHQEKRK 109
Query: 67 TLSGVDVIEGVKQIGFEVIIEILGKSY 93
T++G D++ + +GF+ +E L K Y
Sbjct: 110 TINGEDILFAMSTLGFDSYVEPL-KLY 135
>UNIPROTKB|H7C5X4 [details] [associations]
symbol:Nfyb "Nuclear transcription factor Y subunit beta"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR003956 InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
PROSITE:PS00685 RGD:3172 GO:GO:0005634 GO:GO:0006355 GO:GO:0043565
Gene3D:1.10.20.10 SUPFAM:SSF47113 PANTHER:PTHR11064:SF9
ProteinModelPortal:H7C5X4 Ensembl:ENSRNOT00000014122 Uniprot:H7C5X4
Length = 205
Score = 124 (48.7 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 30/87 (34%), Positives = 52/87 (59%)
Query: 7 DLNLPSAIIQRLIKEALPKDAEGKINVSKDVRLAAGKAASLFILHLTTEALSIANEKNRK 66
D+ LP A + R++K A+P+ GKI +KD + + S FI +T+EA +++ RK
Sbjct: 54 DIYLPIANVARIMKNAIPQT--GKI--AKDAKECVQECVSEFISFITSEASERCHQEKRK 109
Query: 67 TLSGVDVIEGVKQIGFEVIIEILGKSY 93
T++G D++ + +GF+ +E L K Y
Sbjct: 110 TINGEDILFAMSTLGFDSYVEPL-KLY 135
>UNIPROTKB|Q32KW0 [details] [associations]
symbol:NFYB "Nuclear transcription factor Y subunit beta"
species:9913 "Bos taurus" [GO:0070491 "repressing transcription
factor binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016602
"CCAAT-binding factor complex" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR003956 InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
PROSITE:PS00685 GO:GO:0045893 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.20.10 SUPFAM:SSF47113 eggNOG:COG2036
GeneTree:ENSGT00550000074689 GO:GO:0016602 PANTHER:PTHR11064:SF9
EMBL:BC109900 IPI:IPI01002647 RefSeq:NP_001073254.1
UniGene:Bt.63176 ProteinModelPortal:Q32KW0 SMR:Q32KW0 STRING:Q32KW0
Ensembl:ENSBTAT00000043454 GeneID:614382 KEGG:bta:614382 CTD:4801
HOVERGEN:HBG008864 InParanoid:Q32KW0 KO:K08065 OMA:KENFREQ
OrthoDB:EOG4D52ZM NextBio:20899084 ArrayExpress:Q32KW0
Uniprot:Q32KW0
Length = 207
Score = 124 (48.7 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 30/87 (34%), Positives = 52/87 (59%)
Query: 7 DLNLPSAIIQRLIKEALPKDAEGKINVSKDVRLAAGKAASLFILHLTTEALSIANEKNRK 66
D+ LP A + R++K A+P+ GKI +KD + + S FI +T+EA +++ RK
Sbjct: 56 DIYLPIANVARIMKNAIPQT--GKI--AKDAKECVQECVSEFISFITSEASERCHQEKRK 111
Query: 67 TLSGVDVIEGVKQIGFEVIIEILGKSY 93
T++G D++ + +GF+ +E L K Y
Sbjct: 112 TINGEDILFAMSTLGFDSYVEPL-KLY 137
>UNIPROTKB|P25208 [details] [associations]
symbol:NFYB "Nuclear transcription factor Y subunit beta"
species:9606 "Homo sapiens" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0016602 "CCAAT-binding
factor complex" evidence=IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0070491 "repressing transcription factor binding" evidence=IPI]
Reactome:REACT_111217 InterPro:IPR003956 InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
PROSITE:PS00685 GO:GO:0045893 GO:GO:0003677 GO:GO:0043565
EMBL:CH471054 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.20.10
SUPFAM:SSF47113 eggNOG:COG2036 GO:GO:0016602 HOGENOM:HOG000211832
PANTHER:PTHR11064:SF9 CTD:4801 HOVERGEN:HBG008864 KO:K08065
OMA:KENFREQ OrthoDB:EOG4D52ZM EMBL:L06145 EMBL:X59710 EMBL:AK291934
EMBL:BC005316 EMBL:BC005317 EMBL:BC007035 IPI:IPI00013217
PIR:S22817 RefSeq:NP_006157.1 UniGene:Hs.84928 PDB:1N1J PDBsum:1N1J
ProteinModelPortal:P25208 SMR:P25208 IntAct:P25208 MINT:MINT-146867
STRING:P25208 PhosphoSite:P25208 DMDM:399193 PaxDb:P25208
PRIDE:P25208 DNASU:4801 Ensembl:ENST00000240055
Ensembl:ENST00000551727 GeneID:4801 KEGG:hsa:4801 UCSC:uc001tkl.1
GeneCards:GC12M104510 HGNC:HGNC:7805 HPA:CAB004211 MIM:189904
neXtProt:NX_P25208 PharmGKB:PA31610 InParanoid:P25208
PhylomeDB:P25208 ChiTaRS:NFYB EvolutionaryTrace:P25208
GenomeRNAi:4801 NextBio:18506 ArrayExpress:P25208 Bgee:P25208
CleanEx:HS_NFYB Genevestigator:P25208 GermOnline:ENSG00000120837
Uniprot:P25208
Length = 207
Score = 124 (48.7 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 30/87 (34%), Positives = 52/87 (59%)
Query: 7 DLNLPSAIIQRLIKEALPKDAEGKINVSKDVRLAAGKAASLFILHLTTEALSIANEKNRK 66
D+ LP A + R++K A+P+ GKI +KD + + S FI +T+EA +++ RK
Sbjct: 56 DIYLPIANVARIMKNAIPQT--GKI--AKDAKECVQECVSEFISFITSEASERCHQEKRK 111
Query: 67 TLSGVDVIEGVKQIGFEVIIEILGKSY 93
T++G D++ + +GF+ +E L K Y
Sbjct: 112 TINGEDILFAMSTLGFDSYVEPL-KLY 137
>UNIPROTKB|F1SG36 [details] [associations]
symbol:NFYB "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070491 "repressing transcription factor binding"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016602 "CCAAT-binding factor
complex" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR003956
InterPro:IPR003957 InterPro:IPR003958 InterPro:IPR009072
Pfam:PF00808 PRINTS:PR00615 PROSITE:PS00685 GO:GO:0045893
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.20.10 SUPFAM:SSF47113
GeneTree:ENSGT00550000074689 GO:GO:0016602 PANTHER:PTHR11064:SF9
CTD:4801 KO:K08065 OMA:KENFREQ EMBL:CU457468 RefSeq:NP_001138402.1
UniGene:Ssc.54110 Ensembl:ENSSSCT00000000919 GeneID:100157587
KEGG:ssc:100157587 ArrayExpress:F1SG36 Uniprot:F1SG36
Length = 207
Score = 124 (48.7 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 30/87 (34%), Positives = 52/87 (59%)
Query: 7 DLNLPSAIIQRLIKEALPKDAEGKINVSKDVRLAAGKAASLFILHLTTEALSIANEKNRK 66
D+ LP A + R++K A+P+ GKI +KD + + S FI +T+EA +++ RK
Sbjct: 56 DIYLPIANVARIMKNAIPQT--GKI--AKDAKECVQECVSEFISFITSEASERCHQEKRK 111
Query: 67 TLSGVDVIEGVKQIGFEVIIEILGKSY 93
T++G D++ + +GF+ +E L K Y
Sbjct: 112 TINGEDILFAMSTLGFDSYVEPL-KLY 137
>MGI|MGI:97317 [details] [associations]
symbol:Nfyb "nuclear transcription factor-Y beta"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=ISO;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005667 "transcription factor complex"
evidence=IC] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0016602 "CCAAT-binding factor
complex" evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=ISO] Reactome:REACT_112621
InterPro:IPR003956 InterPro:IPR003957 InterPro:IPR003958
InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615 PROSITE:PS00685
MGI:MGI:97317 GO:GO:0045893 GO:GO:0003677 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 Gene3D:1.10.20.10
SUPFAM:SSF47113 eggNOG:COG2036 GeneTree:ENSGT00550000074689
GO:GO:0016602 PANTHER:PTHR11064:SF9 CTD:4801 HOVERGEN:HBG008864
KO:K08065 OMA:KENFREQ EMBL:X55316 EMBL:AK010762 EMBL:AK146168
EMBL:BC010719 IPI:IPI00753226 PIR:F38245 RefSeq:NP_035044.1
UniGene:Mm.245998 ProteinModelPortal:P63139 SMR:P63139
STRING:P63139 PhosphoSite:P63139 PRIDE:P63139 DNASU:18045
Ensembl:ENSMUST00000130911 GeneID:18045 KEGG:mmu:18045
UCSC:uc007gjv.1 InParanoid:P63139 NextBio:293161 Bgee:P63139
CleanEx:MM_NFYB Genevestigator:P63139 GermOnline:ENSMUSG00000020248
Uniprot:P63139
Length = 207
Score = 124 (48.7 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 30/87 (34%), Positives = 52/87 (59%)
Query: 7 DLNLPSAIIQRLIKEALPKDAEGKINVSKDVRLAAGKAASLFILHLTTEALSIANEKNRK 66
D+ LP A + R++K A+P+ GKI +KD + + S FI +T+EA +++ RK
Sbjct: 56 DIYLPIANVARIMKNAIPQT--GKI--AKDAKECVQECVSEFISFITSEASERCHQEKRK 111
Query: 67 TLSGVDVIEGVKQIGFEVIIEILGKSY 93
T++G D++ + +GF+ +E L K Y
Sbjct: 112 TINGEDILFAMSTLGFDSYVEPL-KLY 137
>RGD|3172 [details] [associations]
symbol:Nfyb "nuclear transcription factor-Y beta" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0016602 "CCAAT-binding factor complex" evidence=IEA;ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0070491 "repressing transcription factor binding"
evidence=IEA;ISO] InterPro:IPR003956 InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
PROSITE:PS00685 RGD:3172 GO:GO:0045893 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.20.10 SUPFAM:SSF47113 eggNOG:COG2036
GeneTree:ENSGT00550000074689 GO:GO:0016602 HOGENOM:HOG000211832
PANTHER:PTHR11064:SF9 CTD:4801 HOVERGEN:HBG008864 KO:K08065
OrthoDB:EOG4D52ZM EMBL:M55045 EMBL:BC089791 IPI:IPI00208278
PIR:A23692 RefSeq:NP_113741.1 UniGene:Rn.90077
ProteinModelPortal:P63140 SMR:P63140 DIP:DIP-2660N STRING:P63140
Ensembl:ENSRNOT00000066143 GeneID:25336 KEGG:rno:25336 UCSC:RGD:3172
InParanoid:P63140 NextBio:606231 ArrayExpress:P63140
Genevestigator:P63140 GermOnline:ENSRNOG00000010309 Uniprot:P63140
Length = 207
Score = 124 (48.7 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 30/87 (34%), Positives = 52/87 (59%)
Query: 7 DLNLPSAIIQRLIKEALPKDAEGKINVSKDVRLAAGKAASLFILHLTTEALSIANEKNRK 66
D+ LP A + R++K A+P+ GKI +KD + + S FI +T+EA +++ RK
Sbjct: 56 DIYLPIANVARIMKNAIPQT--GKI--AKDAKECVQECVSEFISFITSEASERCHQEKRK 111
Query: 67 TLSGVDVIEGVKQIGFEVIIEILGKSY 93
T++G D++ + +GF+ +E L K Y
Sbjct: 112 TINGEDILFAMSTLGFDSYVEPL-KLY 137
>UNIPROTKB|F1M6L1 [details] [associations]
symbol:Nfyb "Nuclear transcription factor Y subunit beta"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR003956 InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
PROSITE:PS00685 RGD:3172 GO:GO:0005634 GO:GO:0006355 GO:GO:0043565
Gene3D:1.10.20.10 SUPFAM:SSF47113 PANTHER:PTHR11064:SF9
IPI:IPI00949385 Ensembl:ENSRNOT00000067075 ArrayExpress:F1M6L1
Uniprot:F1M6L1
Length = 207
Score = 124 (48.7 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 30/87 (34%), Positives = 52/87 (59%)
Query: 7 DLNLPSAIIQRLIKEALPKDAEGKINVSKDVRLAAGKAASLFILHLTTEALSIANEKNRK 66
D+ LP A + R++K A+P+ GKI +KD + + S FI +T+EA +++ RK
Sbjct: 56 DIYLPIANVARIMKNAIPQT--GKI--AKDAKECVQECVSEFISFITSEASERCHQEKRK 111
Query: 67 TLSGVDVIEGVKQIGFEVIIEILGKSY 93
T++G D++ + +GF+ +E L K Y
Sbjct: 112 TINGEDILFAMSTLGFDSYVEPL-KLY 137
>POMBASE|SPBC3D6.09 [details] [associations]
symbol:dpb4 "DNA polymerase epsilon subunit Dpb4"
species:4896 "Schizosaccharomyces pombe" [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006261 "DNA-dependent DNA
replication" evidence=IC] [GO:0006270 "DNA replication initiation"
evidence=IGI] [GO:0008622 "epsilon DNA polymerase complex"
evidence=IPI] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043596 "nuclear replication fork" evidence=IC]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808
PomBase:SPBC3D6.09 GO:GO:0005829 EMBL:CU329671 GO:GO:0043565
GenomeReviews:CU329671_GR GO:GO:0000790 GO:GO:0006270
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0008622 GO:GO:0003887
PIR:T40369 RefSeq:NP_595521.1 ProteinModelPortal:P87174
IntAct:P87174 STRING:P87174 EnsemblFungi:SPBC3D6.09.1
GeneID:2540966 KEGG:spo:SPBC3D6.09 eggNOG:NOG150487 KO:K02326
OMA:AMINSAT OrthoDB:EOG4TQQKQ NextBio:20802081 Uniprot:P87174
Length = 210
Score = 122 (48.0 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 34/91 (37%), Positives = 48/91 (52%)
Query: 5 LDDLNLPSAIIQRLIKEALPKDAEGKINVSKDVRLAAGKAASLFILHLTTEALSIANEKN 64
LDDL LP +II RL+K LP+ K V K+ A +A+LF+ LT+ + IA N
Sbjct: 12 LDDLALPRSIIMRLVKGVLPE----KSLVQKEALKAMINSATLFVSFLTSASGEIATNNN 67
Query: 65 RKTLSGVDVIEGVKQIGFEVIIEILGKSYNA 95
RK L DV+ + +I + + L K A
Sbjct: 68 RKILMPQDVLNALDEIEYPEFSKTLKKHLEA 98
>TAIR|locus:2129885 [details] [associations]
symbol:NF-YB3 ""nuclear factor Y, subunit B3""
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] InterPro:IPR003956 InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
PROSITE:PS00685 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.20.10 SUPFAM:SSF47113 EMBL:Z97336 EMBL:AL161539
eggNOG:COG2036 OMA:NDSGGHK HOGENOM:HOG000211832
PANTHER:PTHR11064:SF9 EMBL:AK117818 EMBL:BT003684 IPI:IPI00516812
PIR:G71407 RefSeq:NP_193190.1 UniGene:At.33269
ProteinModelPortal:O23310 SMR:O23310 IntAct:O23310 STRING:O23310
PaxDb:O23310 PRIDE:O23310 EnsemblPlants:AT4G14540.1 GeneID:827101
KEGG:ath:AT4G14540 GeneFarm:5133 TAIR:At4g14540 InParanoid:O23310
PhylomeDB:O23310 ProtClustDB:CLSN2685335 Genevestigator:O23310
GermOnline:AT4G14540 Uniprot:O23310
Length = 161
Score = 118 (46.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 31/87 (35%), Positives = 49/87 (56%)
Query: 7 DLNLPSAIIQRLIKEALPKDAEGKINVSKDVRLAAGKAASLFILHLTTEALSIANEKNRK 66
D LP A + R++K+ALP +A+ +SKD + + S FI +T EA + RK
Sbjct: 23 DRFLPIANVSRIMKKALPANAK----ISKDAKETVQECVSEFISFITGEASDKCQREKRK 78
Query: 67 TLSGVDVIEGVKQIGFEVIIEILGKSY 93
T++G D++ + +GFE +E L K Y
Sbjct: 79 TINGDDLLWAMTTLGFEDYVEPL-KVY 104
>CGD|CAL0000086 [details] [associations]
symbol:HAP31 species:5476 "Candida albicans" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] [GO:0071280 "cellular response to copper ion"
evidence=IMP] [GO:0035690 "cellular response to drug" evidence=IMP]
[GO:0016602 "CCAAT-binding factor complex" evidence=IEA]
[GO:0043457 "regulation of cellular respiration" evidence=IEA]
[GO:0000436 "carbon catabolite activation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000978 "RNA polymerase
II core promoter proximal region sequence-specific DNA binding"
evidence=IEA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
InterPro:IPR003956 InterPro:IPR003957 InterPro:IPR003958
InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615 PROSITE:PS00685
CGD:CAL0000086 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0071280 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0035690
EMBL:AACQ01000055 EMBL:AACQ01000054 eggNOG:COG2036
HOGENOM:HOG000211832 PANTHER:PTHR11064:SF9 RefSeq:XP_717380.1
RefSeq:XP_717470.1 ProteinModelPortal:Q5A6N7 SMR:Q5A6N7
STRING:Q5A6N7 GeneID:3640853 GeneID:3640994 KEGG:cal:CaO19.517
KEGG:cal:CaO19.8148 Uniprot:Q5A6N7
Length = 105
Score = 117 (46.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 31/86 (36%), Positives = 48/86 (55%)
Query: 10 LPSAIIQRLIKEALPKDAEGKINVSKDVRLAAGKAASLFILHLTTEALSIANEKNRKTLS 69
LP A + R++K LP A+ VSKD + + S FI +T+EA ++ RKT++
Sbjct: 18 LPIANVARIMKNTLPPTAK----VSKDAKECMQECVSEFISFITSEASDKCLKEKRKTIN 73
Query: 70 GVDVIEGVKQIGFEVIIEILGKSYNA 95
G D++ + +GFE E+L K Y A
Sbjct: 74 GEDILYSMYDLGFENYAEVL-KIYLA 98
>UNIPROTKB|Q5ZMV3 [details] [associations]
symbol:DR1 "Protein Dr1" species:9031 "Gallus gallus"
[GO:0003712 "transcription cofactor activity" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IEA] [GO:0017025 "TBP-class protein binding"
evidence=IEA] [GO:0043966 "histone H3 acetylation" evidence=IEA]
InterPro:IPR003957 InterPro:IPR003958 InterPro:IPR009072
InterPro:IPR027113 Pfam:PF00808 PRINTS:PR00615 GO:GO:0006355
GO:GO:0043565 GO:GO:0006351 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0005671 GO:GO:0043966 eggNOG:COG5150 HOGENOM:HOG000178641
PANTHER:PTHR11064:SF8 EMBL:AJ719281 IPI:IPI00571608
RefSeq:NP_001008478.1 UniGene:Gga.3162 ProteinModelPortal:Q5ZMV3
SMR:Q5ZMV3 STRING:Q5ZMV3 Ensembl:ENSGALT00000009417 GeneID:424496
KEGG:gga:424496 CTD:1810 GeneTree:ENSGT00550000075010
InParanoid:Q5ZMV3 OMA:NKKTINA OrthoDB:EOG4WM4W5 NextBio:20826822
Uniprot:Q5ZMV3
Length = 176
Score = 117 (46.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 27/77 (35%), Positives = 43/77 (55%)
Query: 6 DDLNLPSAIIQRLIKEALPKDAEGKINVSKDVRLAAGKAASLFILHLTTEALSIANEKNR 65
DDL +P A I ++IKE LP + V+ D R + FI +++EA I N+ +
Sbjct: 9 DDLTIPRAAINKMIKETLPN-----VRVANDARELVVNCCTEFIHLISSEANEICNKSEK 63
Query: 66 KTLSGVDVIEGVKQIGF 82
KT+S VI+ ++ +GF
Sbjct: 64 KTISPEHVIQALESLGF 80
>UNIPROTKB|Q2KJ19 [details] [associations]
symbol:DR1 "Down-regulator of transcription 1, TBP-binding
(Negative cofactor 2)" species:9913 "Bos taurus" [GO:0043966
"histone H3 acetylation" evidence=IEA] [GO:0017025 "TBP-class
protein binding" evidence=IEA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0003712 "transcription cofactor activity"
evidence=IEA] InterPro:IPR003957 InterPro:IPR003958
InterPro:IPR009072 InterPro:IPR027113 Pfam:PF00808 PRINTS:PR00615
GO:GO:0043565 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0005671
GO:GO:0043966 eggNOG:COG5150 HOGENOM:HOG000178641
PANTHER:PTHR11064:SF8 CTD:1810 GeneTree:ENSGT00550000075010
OMA:NKKTINA OrthoDB:EOG4WM4W5 HOVERGEN:HBG002051 EMBL:DAAA02007887
EMBL:BC105564 IPI:IPI00717517 RefSeq:NP_001039984.1
UniGene:Bt.42356 SMR:Q2KJ19 STRING:Q2KJ19
Ensembl:ENSBTAT00000011514 GeneID:613828 KEGG:bta:613828
InParanoid:Q2KJ19 NextBio:20898794 Uniprot:Q2KJ19
Length = 176
Score = 117 (46.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 27/77 (35%), Positives = 43/77 (55%)
Query: 6 DDLNLPSAIIQRLIKEALPKDAEGKINVSKDVRLAAGKAASLFILHLTTEALSIANEKNR 65
DDL +P A I ++IKE LP + V+ D R + FI +++EA I N+ +
Sbjct: 9 DDLTIPRAAINKMIKETLPN-----VRVANDARELVVNCCTEFIHLISSEANEICNKSEK 63
Query: 66 KTLSGVDVIEGVKQIGF 82
KT+S VI+ ++ +GF
Sbjct: 64 KTISPEHVIQALESLGF 80
>UNIPROTKB|E2RR45 [details] [associations]
symbol:DR1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0017025 "TBP-class protein binding" evidence=IEA]
[GO:0005671 "Ada2/Gcn5/Ada3 transcription activator complex"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0003712 "transcription
cofactor activity" evidence=IEA] InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 InterPro:IPR027113
Pfam:PF00808 PRINTS:PR00615 GO:GO:0043565 Gene3D:1.10.20.10
SUPFAM:SSF47113 GO:GO:0005671 GO:GO:0043966 PANTHER:PTHR11064:SF8
CTD:1810 GeneTree:ENSGT00550000075010 OMA:NKKTINA EMBL:AAEX03004819
RefSeq:XP_537068.1 ProteinModelPortal:E2RR45
Ensembl:ENSCAFT00000032065 GeneID:479943 KEGG:cfa:479943
NextBio:20855049 Uniprot:E2RR45
Length = 176
Score = 117 (46.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 27/77 (35%), Positives = 43/77 (55%)
Query: 6 DDLNLPSAIIQRLIKEALPKDAEGKINVSKDVRLAAGKAASLFILHLTTEALSIANEKNR 65
DDL +P A I ++IKE LP + V+ D R + FI +++EA I N+ +
Sbjct: 9 DDLTIPRAAINKMIKETLPN-----VRVANDARELVVNCCTEFIHLISSEANEICNKSEK 63
Query: 66 KTLSGVDVIEGVKQIGF 82
KT+S VI+ ++ +GF
Sbjct: 64 KTISPEHVIQALESLGF 80
>UNIPROTKB|F8VSL3 [details] [associations]
symbol:NFYB "Nuclear transcription factor Y subunit beta"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] InterPro:IPR003956 InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
PROSITE:PS00685 GO:GO:0005634 GO:GO:0006355 GO:GO:0043565
Gene3D:1.10.20.10 SUPFAM:SSF47113 PANTHER:PTHR11064:SF9
HGNC:HGNC:7805 ChiTaRS:NFYB EMBL:AC089983 IPI:IPI01021893
ProteinModelPortal:F8VSL3 SMR:F8VSL3 Ensembl:ENST00000551446
ArrayExpress:F8VSL3 Bgee:F8VSL3 Uniprot:F8VSL3
Length = 131
Score = 117 (46.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 26/77 (33%), Positives = 47/77 (61%)
Query: 7 DLNLPSAIIQRLIKEALPKDAEGKINVSKDVRLAAGKAASLFILHLTTEALSIANEKNRK 66
D+ LP A + R++K A+P+ GKI +KD + + S FI +T+EA +++ RK
Sbjct: 57 DIYLPIANVARIMKNAIPQT--GKI--AKDAKECVQECVSEFISFITSEASERCHQEKRK 112
Query: 67 TLSGVDVIEGVKQIGFE 83
T++G D++ + +GF+
Sbjct: 113 TINGEDILFAMSTLGFD 129
>UNIPROTKB|Q01658 [details] [associations]
symbol:DR1 "Protein Dr1" species:9606 "Homo sapiens"
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0003677 "DNA binding"
evidence=TAS] [GO:0008134 "transcription factor binding"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0017025 "TBP-class protein binding" evidence=IDA] [GO:0043966
"histone H3 acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 InterPro:IPR027113
Pfam:PF00808 PRINTS:PR00615 GO:GO:0003714 GO:GO:0003677
GO:GO:0043565 GO:GO:0006351 GO:GO:0000122 Gene3D:1.10.20.10
SUPFAM:SSF47113 GO:GO:0005671 GO:GO:0043966 GO:GO:0017025 PDB:1JFI
PDBsum:1JFI eggNOG:COG5150 HOGENOM:HOG000178641
PANTHER:PTHR11064:SF8 CTD:1810 OMA:NKKTINA OrthoDB:EOG4WM4W5
EMBL:M97388 EMBL:BT006972 EMBL:AL137159 EMBL:BC002809 EMBL:BC035507
EMBL:BC068553 IPI:IPI00008991 PIR:A43320 RefSeq:NP_001929.1
UniGene:Hs.348418 ProteinModelPortal:Q01658 SMR:Q01658
IntAct:Q01658 MINT:MINT-204839 STRING:Q01658 PhosphoSite:Q01658
DMDM:401162 PaxDb:Q01658 PeptideAtlas:Q01658 PRIDE:Q01658
DNASU:1810 Ensembl:ENST00000370267 Ensembl:ENST00000370272
GeneID:1810 KEGG:hsa:1810 UCSC:uc001dpu.3 GeneCards:GC01P093811
HGNC:HGNC:3017 MIM:601482 neXtProt:NX_Q01658 PharmGKB:PA27475
HOVERGEN:HBG002051 InParanoid:Q01658 PhylomeDB:Q01658
EvolutionaryTrace:Q01658 GenomeRNAi:1810 NextBio:7377
ArrayExpress:Q01658 Bgee:Q01658 CleanEx:HS_DR1
Genevestigator:Q01658 GermOnline:ENSG00000117505 Uniprot:Q01658
Length = 176
Score = 117 (46.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 27/77 (35%), Positives = 43/77 (55%)
Query: 6 DDLNLPSAIIQRLIKEALPKDAEGKINVSKDVRLAAGKAASLFILHLTTEALSIANEKNR 65
DDL +P A I ++IKE LP + V+ D R + FI +++EA I N+ +
Sbjct: 9 DDLTIPRAAINKMIKETLPN-----VRVANDARELVVNCCTEFIHLISSEANEICNKSEK 63
Query: 66 KTLSGVDVIEGVKQIGF 82
KT+S VI+ ++ +GF
Sbjct: 64 KTISPEHVIQALESLGF 80
>UNIPROTKB|Q5A6N7 [details] [associations]
symbol:HAP31 "Potential histone-like transcription factor"
species:237561 "Candida albicans SC5314" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] [GO:0035690 "cellular response to drug" evidence=IMP]
[GO:0071280 "cellular response to copper ion" evidence=IMP]
InterPro:IPR003956 InterPro:IPR003957 InterPro:IPR003958
InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615 PROSITE:PS00685
CGD:CAL0000086 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0071280 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0035690
EMBL:AACQ01000055 EMBL:AACQ01000054 eggNOG:COG2036
HOGENOM:HOG000211832 PANTHER:PTHR11064:SF9 RefSeq:XP_717380.1
RefSeq:XP_717470.1 ProteinModelPortal:Q5A6N7 SMR:Q5A6N7
STRING:Q5A6N7 GeneID:3640853 GeneID:3640994 KEGG:cal:CaO19.517
KEGG:cal:CaO19.8148 Uniprot:Q5A6N7
Length = 105
Score = 117 (46.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 31/86 (36%), Positives = 48/86 (55%)
Query: 10 LPSAIIQRLIKEALPKDAEGKINVSKDVRLAAGKAASLFILHLTTEALSIANEKNRKTLS 69
LP A + R++K LP A+ VSKD + + S FI +T+EA ++ RKT++
Sbjct: 18 LPIANVARIMKNTLPPTAK----VSKDAKECMQECVSEFISFITSEASDKCLKEKRKTIN 73
Query: 70 GVDVIEGVKQIGFEVIIEILGKSYNA 95
G D++ + +GFE E+L K Y A
Sbjct: 74 GEDILYSMYDLGFENYAEVL-KIYLA 98
>MGI|MGI:1100515 [details] [associations]
symbol:Dr1 "down-regulator of transcription 1" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=ISO;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0017025 "TBP-class protein binding" evidence=ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=ISO] [GO:0046982
"protein heterodimerization activity" evidence=IEA]
InterPro:IPR003957 InterPro:IPR003958 InterPro:IPR009072
InterPro:IPR027113 Pfam:PF00808 PRINTS:PR00615 MGI:MGI:1100515
GO:GO:0005634 GO:GO:0006355 GO:GO:0043565 GO:GO:0006351
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0005671 GO:GO:0043966
eggNOG:COG5150 HOGENOM:HOG000178641 PANTHER:PTHR11064:SF8 CTD:1810
GeneTree:ENSGT00550000075010 OMA:NKKTINA OrthoDB:EOG4WM4W5
EMBL:AK031057 EMBL:AK075713 EMBL:AK090113 EMBL:AK139866
EMBL:AK146573 EMBL:BC013461 IPI:IPI00128424 RefSeq:NP_080382.2
UniGene:Mm.303534 ProteinModelPortal:Q91WV0 SMR:Q91WV0
STRING:Q91WV0 PhosphoSite:Q91WV0 PaxDb:Q91WV0 PRIDE:Q91WV0
Ensembl:ENSMUST00000031190 GeneID:13486 KEGG:mmu:13486
UCSC:uc008ynt.1 InParanoid:Q91WV0 NextBio:283989 Bgee:Q91WV0
CleanEx:MM_DR1 Genevestigator:Q91WV0 GermOnline:ENSMUSG00000029265
Uniprot:Q91WV0
Length = 176
Score = 117 (46.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 27/77 (35%), Positives = 43/77 (55%)
Query: 6 DDLNLPSAIIQRLIKEALPKDAEGKINVSKDVRLAAGKAASLFILHLTTEALSIANEKNR 65
DDL +P A I ++IKE LP + V+ D R + FI +++EA I N+ +
Sbjct: 9 DDLTIPRAAINKMIKETLPN-----VRVANDARELVVNCCTEFIHLISSEANEICNKSEK 63
Query: 66 KTLSGVDVIEGVKQIGF 82
KT+S VI+ ++ +GF
Sbjct: 64 KTISPEHVIQALESLGF 80
>RGD|1305201 [details] [associations]
symbol:Dr1 "down-regulator of transcription 1" species:10116
"Rattus norvegicus" [GO:0003712 "transcription cofactor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0017025 "TBP-class protein binding"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043966 "histone H3 acetylation" evidence=ISO]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
InterPro:IPR003957 InterPro:IPR003958 InterPro:IPR009072
InterPro:IPR027113 Pfam:PF00808 PRINTS:PR00615 RGD:1305201
GO:GO:0006355 GO:GO:0043565 GO:GO:0006351 Gene3D:1.10.20.10
SUPFAM:SSF47113 GO:GO:0005671 GO:GO:0043966 eggNOG:COG5150
HOGENOM:HOG000178641 PANTHER:PTHR11064:SF8 CTD:1810
GeneTree:ENSGT00550000075010 OMA:NKKTINA OrthoDB:EOG4WM4W5
EMBL:BC083822 IPI:IPI00362084 RefSeq:NP_001011914.1
RefSeq:XP_003751365.1 UniGene:Rn.6666 ProteinModelPortal:Q5XI68
SMR:Q5XI68 STRING:Q5XI68 PhosphoSite:Q5XI68 PRIDE:Q5XI68
Ensembl:ENSRNOT00000000080 GeneID:100910207 GeneID:289881
KEGG:rno:100910207 KEGG:rno:289881 UCSC:RGD:1305201
InParanoid:Q5XI68 NextBio:630458 Genevestigator:Q5XI68
GermOnline:ENSRNOG00000000070 Uniprot:Q5XI68
Length = 176
Score = 117 (46.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 27/77 (35%), Positives = 43/77 (55%)
Query: 6 DDLNLPSAIIQRLIKEALPKDAEGKINVSKDVRLAAGKAASLFILHLTTEALSIANEKNR 65
DDL +P A I ++IKE LP + V+ D R + FI +++EA I N+ +
Sbjct: 9 DDLTIPRAAINKMIKETLPN-----VRVANDARELVVNCCTEFIHLISSEANEICNKSEK 63
Query: 66 KTLSGVDVIEGVKQIGF 82
KT+S VI+ ++ +GF
Sbjct: 64 KTISPEHVIQALESLGF 80
>TAIR|locus:2168983 [details] [associations]
symbol:NF-YB2 ""nuclear factor Y, subunit B2""
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] InterPro:IPR003956 InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
PROSITE:PS00685 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.20.10 SUPFAM:SSF47113 EMBL:AB025628 eggNOG:COG2036
HOGENOM:HOG000211832 PANTHER:PTHR11064:SF9 EMBL:AF385744
EMBL:AY078026 EMBL:Y13724 EMBL:AF250338 IPI:IPI00519534
RefSeq:NP_199575.1 UniGene:At.21494 UniGene:At.71142
ProteinModelPortal:Q9FGJ3 SMR:Q9FGJ3 STRING:Q9FGJ3 PaxDb:Q9FGJ3
PRIDE:Q9FGJ3 EnsemblPlants:AT5G47640.1 GeneID:834815
KEGG:ath:AT5G47640 GeneFarm:5132 TAIR:At5g47640 InParanoid:Q9FGJ3
OMA:YLQRFRE PhylomeDB:Q9FGJ3 ProtClustDB:CLSN2914913
Genevestigator:Q9FGJ3 GermOnline:AT5G47640 Uniprot:Q9FGJ3
Length = 190
Score = 117 (46.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 31/87 (35%), Positives = 50/87 (57%)
Query: 7 DLNLPSAIIQRLIKEALPKDAEGKINVSKDVRLAAGKAASLFILHLTTEALSIANEKNRK 66
D LP A + R++K+ALP +A+ +SKD + + S FI +T EA ++ RK
Sbjct: 29 DRFLPIANVSRIMKKALPANAK----ISKDAKETMQECVSEFISFVTGEASDKCQKEKRK 84
Query: 67 TLSGVDVIEGVKQIGFEVIIEILGKSY 93
T++G D++ + +GFE +E L K Y
Sbjct: 85 TINGDDLLWAMTTLGFEDYVEPL-KVY 110
>DICTYBASE|DDB_G0279419 [details] [associations]
symbol:nfyB "putative histone-like transcription
factor" species:44689 "Dictyostelium discoideum" [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0016602
"CCAAT-binding factor complex" evidence=ISS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR003956 InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
PROSITE:PS00685 dictyBase:DDB_G0279419 GenomeReviews:CM000152_GR
GO:GO:0043565 GO:GO:0003700 GO:GO:0006366 Gene3D:1.10.20.10
SUPFAM:SSF47113 EMBL:AAFI02000031 eggNOG:COG2036 GO:GO:0016602
RefSeq:XP_641617.1 HSSP:P25208 ProteinModelPortal:Q54WV0 SMR:Q54WV0
EnsemblProtists:DDB0220099 GeneID:8622023 KEGG:ddi:DDB_G0279419
InParanoid:Q54WV0 OMA:SLHNSGN ProtClustDB:CLSZ2846666
Uniprot:Q54WV0
Length = 490
Score = 126 (49.4 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 33/87 (37%), Positives = 50/87 (57%)
Query: 7 DLNLPSAIIQRLIKEALPKDAEGKINVSKDVRLAAGKAASLFILHLTTEALSIANEKNRK 66
D LP A I R++K+ALP +A+ V+KD + S FI +T+EA ++ RK
Sbjct: 50 DRYLPIANIIRIMKKALPNNAK----VAKDAKETVQDCVSEFISFITSEASDKCQQEKRK 105
Query: 67 TLSGVDVIEGVKQIGFEVIIEILGKSY 93
T++G D+I + +GFE +E L K Y
Sbjct: 106 TINGEDIIAAMVSLGFENYVEPL-KVY 131
>UNIPROTKB|F1S534 [details] [associations]
symbol:DR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0003712 "transcription cofactor
activity" evidence=IEA] InterPro:IPR003957 InterPro:IPR003958
InterPro:IPR009072 InterPro:IPR027113 Pfam:PF00808 PRINTS:PR00615
GO:GO:0043565 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0005671
GO:GO:0043966 PANTHER:PTHR11064:SF8 GeneTree:ENSGT00550000075010
OMA:NKKTINA EMBL:CU469025 RefSeq:XP_001928514.1 UniGene:Ssc.5433
Ensembl:ENSSSCT00000025408 GeneID:100152776 KEGG:ssc:100152776
Uniprot:F1S534
Length = 176
Score = 116 (45.9 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 27/77 (35%), Positives = 43/77 (55%)
Query: 6 DDLNLPSAIIQRLIKEALPKDAEGKINVSKDVRLAAGKAASLFILHLTTEALSIANEKNR 65
DDL +P A I ++IKE LP + V+ D R + FI +++EA I N+ +
Sbjct: 9 DDLTIPRAAINKMIKETLPN-----VRVANDARELVVNCCTEFIHLVSSEANEICNKSEK 63
Query: 66 KTLSGVDVIEGVKQIGF 82
KT+S VI+ ++ +GF
Sbjct: 64 KTISPEHVIQALESLGF 80
>WB|WBGene00020823 [details] [associations]
symbol:T26A5.8 species:6239 "Caenorhabditis elegans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0035046 "pronuclear migration" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040027 "negative regulation of
vulval development" evidence=IMP] InterPro:IPR003958
InterPro:IPR009072 Pfam:PF00808 GO:GO:0009792 GO:GO:0035046
GO:GO:0043565 GO:GO:0005622 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0040027 EMBL:FO080366 PIR:T34387 RefSeq:NP_498421.1
ProteinModelPortal:Q22798 IntAct:Q22798 STRING:Q22798 PaxDb:Q22798
EnsemblMetazoa:T26A5.8 GeneID:175921 KEGG:cel:CELE_T26A5.8
UCSC:T26A5.8 CTD:175921 WormBase:T26A5.8 eggNOG:NOG299395
InParanoid:Q22798 OMA:IVTRLMK NextBio:890318 Uniprot:Q22798
Length = 137
Score = 115 (45.5 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 24/78 (30%), Positives = 49/78 (62%)
Query: 3 ESLDDLNLPSAIIQRLIKEALPKDAEGKINVSKDVRLAAGKAASLFILHLTTEALSIANE 62
+ + + +P+AI+ RL+KE I+ SKD R +AA++F+++L+ + A +
Sbjct: 11 DRIAQMMMPAAIVTRLMKE-------DNISASKDARDVIARAAAVFLINLSDVSAQSARD 63
Query: 63 KNRKTLSGVDVIEGVKQI 80
+ KT+SG DV++G++++
Sbjct: 64 QKHKTISGDDVVKGLREL 81
>UNIPROTKB|Q22798 [details] [associations]
symbol:T26A5.8 "Protein T26A5.8" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808
GO:GO:0009792 GO:GO:0035046 GO:GO:0043565 GO:GO:0005622
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0040027 EMBL:FO080366
PIR:T34387 RefSeq:NP_498421.1 ProteinModelPortal:Q22798
IntAct:Q22798 STRING:Q22798 PaxDb:Q22798 EnsemblMetazoa:T26A5.8
GeneID:175921 KEGG:cel:CELE_T26A5.8 UCSC:T26A5.8 CTD:175921
WormBase:T26A5.8 eggNOG:NOG299395 InParanoid:Q22798 OMA:IVTRLMK
NextBio:890318 Uniprot:Q22798
Length = 137
Score = 115 (45.5 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 24/78 (30%), Positives = 49/78 (62%)
Query: 3 ESLDDLNLPSAIIQRLIKEALPKDAEGKINVSKDVRLAAGKAASLFILHLTTEALSIANE 62
+ + + +P+AI+ RL+KE I+ SKD R +AA++F+++L+ + A +
Sbjct: 11 DRIAQMMMPAAIVTRLMKE-------DNISASKDARDVIARAAAVFLINLSDVSAQSARD 63
Query: 63 KNRKTLSGVDVIEGVKQI 80
+ KT+SG DV++G++++
Sbjct: 64 QKHKTISGDDVVKGLREL 81
>ZFIN|ZDB-GENE-061013-797 [details] [associations]
symbol:dr1 "down-regulator of transcription 1"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0003712 "transcription cofactor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003958 InterPro:IPR009072 InterPro:IPR027113
Pfam:PF00808 ZFIN:ZDB-GENE-061013-797 GO:GO:0005634 GO:GO:0043565
Gene3D:1.10.20.10 SUPFAM:SSF47113 eggNOG:COG5150
HOGENOM:HOG000178641 PANTHER:PTHR11064:SF8 CTD:1810
GeneTree:ENSGT00550000075010 OMA:NKKTINA OrthoDB:EOG4WM4W5
EMBL:BX511118 EMBL:CU929159 EMBL:BC124605 IPI:IPI00800622
RefSeq:NP_001070782.1 RefSeq:XP_003198826.1 UniGene:Dr.115546
SMR:Q08BR1 STRING:Q08BR1 Ensembl:ENSDART00000083401
Ensembl:ENSDART00000127108 Ensembl:ENSDART00000129855
Ensembl:ENSDART00000151060 GeneID:100536903 GeneID:768171
KEGG:dre:100536903 KEGG:dre:768171 InParanoid:Q08BR1
NextBio:20918487 Uniprot:Q08BR1
Length = 176
Score = 115 (45.5 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 29/84 (34%), Positives = 45/84 (53%)
Query: 6 DDLNLPSAIIQRLIKEALPKDAEGKINVSKDVRLAAGKAASLFILHLTTEALSIANEKNR 65
DDL +P A I ++IKE LP + V+ D R + FI +++EA I N+ +
Sbjct: 9 DDLTIPRAAINKMIKETLPN-----VRVANDARELVVNCCTEFIHLVSSEANEICNKSEK 63
Query: 66 KTLSGVDVIEGVKQIGF-EVIIEI 88
KT+S VI ++ +GF I E+
Sbjct: 64 KTISPEHVINALESLGFGSYIAEV 87
>TAIR|locus:2061789 [details] [associations]
symbol:NF-YB8 ""nuclear factor Y, subunit B8""
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] InterPro:IPR003956 InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
PROSITE:PS00685 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.20.10 SUPFAM:SSF47113 eggNOG:COG2036 EMBL:AC006260
HOGENOM:HOG000211832 PANTHER:PTHR11064:SF9 EMBL:AY070477
EMBL:AY091673 IPI:IPI00541270 PIR:A84788 RefSeq:NP_001031500.1
RefSeq:NP_850277.2 RefSeq:NP_973617.1 UniGene:At.28391
ProteinModelPortal:Q8VYK4 SMR:Q8VYK4 EnsemblPlants:AT2G37060.1
EnsemblPlants:AT2G37060.2 EnsemblPlants:AT2G37060.3 GeneID:818282
KEGG:ath:AT2G37060 GeneFarm:5138 TAIR:At2g37060 InParanoid:Q8VYK4
OMA:GCGSHES PhylomeDB:Q8VYK4 ProtClustDB:CLSN2681248
Genevestigator:Q8VYK4 GermOnline:AT2G37060 Uniprot:Q8VYK4
Length = 173
Score = 114 (45.2 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 33/87 (37%), Positives = 48/87 (55%)
Query: 7 DLNLPSAIIQRLIKEALPKDAEGKINVSKDVRLAAGKAASLFILHLTTEALSIANEKNRK 66
D LP A I R++K LP A GKI +KD + + S FI +T+EA + RK
Sbjct: 32 DRFLPIANISRIMKRGLP--ANGKI--AKDAKEIVQECVSEFISFVTSEASDKCQREKRK 87
Query: 67 TLSGVDVIEGVKQIGFEVIIEILGKSY 93
T++G D++ + +GFE +E L K Y
Sbjct: 88 TINGDDLLWAMATLGFEDYMEPL-KVY 113
>TAIR|locus:2036064 [details] [associations]
symbol:NF-YB4 ""nuclear factor Y, subunit B4""
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003956 InterPro:IPR003957 InterPro:IPR003958
InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615 PROSITE:PS00685
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.20.10 SUPFAM:SSF47113
EMBL:AC000106 eggNOG:COG2036 HOGENOM:HOG000211832
PANTHER:PTHR11064:SF9 EMBL:BT029363 IPI:IPI00522503 PIR:C86222
RefSeq:NP_172377.1 UniGene:At.64828 ProteinModelPortal:O04027
SMR:O04027 IntAct:O04027 EnsemblPlants:AT1G09030.1 GeneID:837424
KEGG:ath:AT1G09030 GeneFarm:5134 TAIR:At1g09030 InParanoid:O04027
OMA:RERTEHN PhylomeDB:O04027 ProtClustDB:CLSN2912861
ArrayExpress:O04027 Genevestigator:O04027 GermOnline:AT1G09030
Uniprot:O04027
Length = 139
Score = 109 (43.4 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 26/86 (30%), Positives = 49/86 (56%)
Query: 6 DDLNLPSAIIQRLIKEALPKDAEGKINVSKDVRLAAGKAASLFILHLTTEALSIANEKNR 65
+D LP A + RL+K+ LP +A+ +SK+ + + A+ FI +T EA + +NR
Sbjct: 4 EDRLLPIANVGRLMKQILPSNAK----ISKEAKQTVQECATEFISFVTCEASEKCHRENR 59
Query: 66 KTLSGVDVIEGVKQIGFEVIIEILGK 91
KT++G D+ + +G + + +G+
Sbjct: 60 KTVNGDDIWWALSTLGLDNYADAVGR 85
>TAIR|locus:2083941 [details] [associations]
symbol:NF-YB10 ""nuclear factor Y, subunit B10""
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] InterPro:IPR003956 InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
PROSITE:PS00685 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
EMBL:AL132966 Gene3D:1.10.20.10 SUPFAM:SSF47113 eggNOG:COG2036
HOGENOM:HOG000211832 PANTHER:PTHR11064:SF9 ProtClustDB:CLSN2681248
EMBL:AK176827 IPI:IPI00539611 PIR:T45874 RefSeq:NP_190902.2
UniGene:At.35203 ProteinModelPortal:Q67XJ2 SMR:Q67XJ2 IntAct:Q67XJ2
PaxDb:Q67XJ2 PRIDE:Q67XJ2 EnsemblPlants:AT3G53340.1 GeneID:824502
KEGG:ath:AT3G53340 GeneFarm:5140 TAIR:At3g53340 InParanoid:Q67XJ2
OMA:QKYREVR PhylomeDB:Q67XJ2 Genevestigator:Q67XJ2
GermOnline:AT3G53340 Uniprot:Q67XJ2
Length = 176
Score = 109 (43.4 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 32/87 (36%), Positives = 48/87 (55%)
Query: 7 DLNLPSAIIQRLIKEALPKDAEGKINVSKDVRLAAGKAASLFILHLTTEALSIANEKNRK 66
D LP A I R++K LP + GKI +KD + + S FI +T+EA + RK
Sbjct: 31 DRFLPIANISRIMKRGLPLN--GKI--AKDAKETMQECVSEFISFVTSEASDKCQREKRK 86
Query: 67 TLSGVDVIEGVKQIGFEVIIEILGKSY 93
T++G D++ + +GFE I+ L K Y
Sbjct: 87 TINGDDLLWAMATLGFEDYIDPL-KVY 112
>FB|FBgn0028926 [details] [associations]
symbol:NC2beta "Negative Cofactor 2beta" species:7227
"Drosophila melanogaster" [GO:0017055 "negative regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=NAS] [GO:0017054 "negative cofactor 2 complex"
evidence=NAS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0001075 "RNA
polymerase II core promoter sequence-specific DNA binding
transcription factor activity involved in preinitiation complex
assembly" evidence=IPI] [GO:0003712 "transcription cofactor
activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005671 "Ada2/Gcn5/Ada3 transcription activator complex"
evidence=IPI] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IDA] [GO:0004402
"histone acetyltransferase activity" evidence=IDA]
InterPro:IPR003958 InterPro:IPR009072 InterPro:IPR027113
Pfam:PF00808 EMBL:AE014134 GO:GO:0043565 GO:GO:0045944
GO:GO:0000122 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0005671
GO:GO:0042766 GO:GO:0051123 eggNOG:COG5150 PANTHER:PTHR11064:SF8
GeneTree:ENSGT00550000075010 OMA:NKKTINA EMBL:AF302257
EMBL:AY060717 EMBL:DQ138728 RefSeq:NP_609736.1 UniGene:Dm.3397
ProteinModelPortal:Q9VJQ5 SMR:Q9VJQ5 IntAct:Q9VJQ5 MINT:MINT-823185
STRING:Q9VJQ5 PaxDb:Q9VJQ5 EnsemblMetazoa:FBtr0080695 GeneID:34875
KEGG:dme:Dmel_CG4185 UCSC:CG4185-RA CTD:34875 FlyBase:FBgn0028926
InParanoid:Q9VJQ5 OrthoDB:EOG47WM56 PhylomeDB:Q9VJQ5
GenomeRNAi:34875 NextBio:790647 Bgee:Q9VJQ5 GermOnline:CG4185
Uniprot:Q9VJQ5
Length = 183
Score = 109 (43.4 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 25/77 (32%), Positives = 45/77 (58%)
Query: 6 DDLNLPSAIIQRLIKEALPKDAEGKINVSKDVRLAAGKAASLFILHLTTEALSIANEKNR 65
D+L LP A I ++IKE +P + V+ + R S FI +++EA + N +N+
Sbjct: 16 DELTLPRASINKIIKELVPT-----VRVANESRELILNCCSEFIHLISSEANEVCNMRNK 70
Query: 66 KTLSGVDVIEGVKQIGF 82
KT++ V+E ++++GF
Sbjct: 71 KTINAEHVLEALERLGF 87
>SGD|S000002528 [details] [associations]
symbol:DPB4 "Subunit of DNA pol epsilon and of ISW2 chromatin
accessibility complex" species:4932 "Saccharomyces cerevisiae"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0070868 "heterochromatin organization involved in chromatin
silencing" evidence=IGI;IMP] [GO:0008623 "CHRAC" evidence=IDA;IPI]
[GO:0006261 "DNA-dependent DNA replication" evidence=IMP;IDA]
[GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA;IMP;IDA;IPI] [GO:0042276 "error-prone translesion
synthesis" evidence=IDA] [GO:0006272 "leading strand elongation"
evidence=IGI;IMP] [GO:0090399 "replicative senescence"
evidence=IMP] [GO:0031490 "chromatin DNA binding" evidence=IDA]
[GO:0031492 "nucleosomal DNA binding" evidence=IDA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IDA] [GO:0042766
"nucleosome mobilization" evidence=IDA] [GO:0003697
"single-stranded DNA binding" evidence=IDA] [GO:0003690
"double-stranded DNA binding" evidence=IDA] [GO:0008622 "epsilon
DNA polymerase complex" evidence=IDA;IPI] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR009072 SGD:S000002528 EMBL:BK006938 GO:GO:0006351
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0070868 EMBL:Z48758
RefSeq:NP_010406.3 GeneID:851699 KEGG:sce:YDR121W GO:GO:0042766
GO:GO:0043044 GO:GO:0090399 GO:GO:0008623 GO:GO:0008622
GO:GO:0003887 GO:GO:0042276 GO:GO:0006272 KO:K02326
OrthoDB:EOG4TQQKQ EMBL:AY557673 PIR:S52686 RefSeq:NP_010410.3
ProteinModelPortal:Q04603 SMR:Q04603 DIP:DIP-4621N IntAct:Q04603
MINT:MINT-481682 STRING:Q04603 PaxDb:Q04603 PeptideAtlas:Q04603
EnsemblFungi:YDR121W GeneID:851703 KEGG:sce:YDR125C CYGD:YDR121w
eggNOG:NOG325217 HOGENOM:HOG000112253 OMA:ATVFVNH NextBio:969368
Genevestigator:Q04603 GermOnline:YDR121W GO:GO:0031492
Uniprot:Q04603
Length = 196
Score = 110 (43.8 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 25/82 (30%), Positives = 46/82 (56%)
Query: 4 SLDDLNLPSAIIQRLIKEALPKDAEGKINVSKDVRLAAGKAASLFILHLTTEALSIANEK 63
++ DL P + I L +E +P+ + K+ ++KD LA + A++F+ HL A IA +
Sbjct: 27 TIQDLLFPKSTIVNLARE-VPQQSGKKLLINKDASLALQRGATVFVNHLLLFAREIAKSQ 85
Query: 64 NRKTLSGVDVIEGVKQIGFEVI 85
++K+ S DV+ + IG +
Sbjct: 86 DKKSCSVDDVLSALDHIGHSAL 107
>TAIR|locus:2054095 [details] [associations]
symbol:NF-YB7 ""nuclear factor Y, subunit B7""
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] InterPro:IPR003956 InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
PROSITE:PS00685 GO:GO:0005634 EMBL:CP002685 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 EMBL:AC007063 Gene3D:1.10.20.10
SUPFAM:SSF47113 eggNOG:COG2036 PANTHER:PTHR11064:SF9 EMBL:DQ446491
EMBL:BT025276 IPI:IPI00548512 PIR:F84508 RefSeq:NP_178981.1
UniGene:At.64924 ProteinModelPortal:Q9SIT9 SMR:Q9SIT9 IntAct:Q9SIT9
EnsemblPlants:AT2G13570.1 GeneID:815843 KEGG:ath:AT2G13570
GeneFarm:5137 TAIR:At2g13570 InParanoid:Q9SIT9 OMA:NKEQDRF
PhylomeDB:Q9SIT9 ProtClustDB:CLSN2913036 ArrayExpress:Q9SIT9
Genevestigator:Q9SIT9 Uniprot:Q9SIT9
Length = 215
Score = 111 (44.1 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 29/77 (37%), Positives = 42/77 (54%)
Query: 7 DLNLPSAIIQRLIKEALPKDAEGKINVSKDVRLAAGKAASLFILHLTTEALSIANEKNRK 66
D LP A + R++K+ LP GKI SKD + + S FI +T EA + RK
Sbjct: 38 DRFLPIANVGRIMKKVLP--GNGKI--SKDAKETVQECVSEFISFVTGEASDKCQREKRK 93
Query: 67 TLSGVDVIEGVKQIGFE 83
T++G D+I + +GFE
Sbjct: 94 TINGDDIIWAITTLGFE 110
>ASPGD|ASPL0000055867 [details] [associations]
symbol:AN9358 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR003958 InterPro:IPR009072 InterPro:IPR027113
Pfam:PF00808 GO:GO:0003714 EMBL:BN001308 GO:GO:0043565
GO:GO:0045944 GO:GO:0000122 GO:GO:0003713 Gene3D:1.10.20.10
SUPFAM:SSF47113 PANTHER:PTHR11064:SF8 OMA:NKKTINA GO:GO:0017054
ProteinModelPortal:C8VR63 EnsemblFungi:CADANIAT00001145
Uniprot:C8VR63
Length = 145
Score = 107 (42.7 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 28/87 (32%), Positives = 52/87 (59%)
Query: 4 SLDDLNLPSAIIQRLIKEALPKDAEGKINVSKDVRLAAGKAASLFILHLTTEALSIANEK 63
S DDL+LP A +Q++I E LP + G+ + SKD R + FI +++EA I+ ++
Sbjct: 8 SNDDLSLPKATVQKIITEILPPSS-GQ-SFSKDARDLLMECCVEFITLISSEANDISEKE 65
Query: 64 NRKTLSGVDVIEGVKQIGF-EVIIEIL 89
+KT++ V ++ +GF + + ++L
Sbjct: 66 AKKTIACEHVERALRDLGFGDYVPDVL 92
>UNIPROTKB|G5EHZ6 [details] [associations]
symbol:MGCH7_ch7g579 "Negative cofactor 2 complex subunit
beta" species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003958
InterPro:IPR009072 InterPro:IPR027113 Pfam:PF00808 GO:GO:0003714
GO:GO:0043565 GO:GO:0045944 GO:GO:0000122 GO:GO:0003713
Gene3D:1.10.20.10 SUPFAM:SSF47113 EMBL:CM000230 EMBL:CM001237
PANTHER:PTHR11064:SF8 GO:GO:0017054 RefSeq:XP_003720914.1
ProteinModelPortal:G5EHZ6 EnsemblFungi:MGG_02824T0 GeneID:2682377
KEGG:mgr:MGG_02824 Uniprot:G5EHZ6
Length = 138
Score = 106 (42.4 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 26/85 (30%), Positives = 53/85 (62%)
Query: 6 DDLNLPSAIIQRLIKEALPKDAEGKINVSKDVRLAAGKAASLFILHLTTEALSIANEKNR 65
DDL+LP A +Q+++ E LP+ ++G I SK+ R + FI +++EA I++++ +
Sbjct: 10 DDLSLPKATVQKIVSEILPQ-SDG-ITYSKEARDLLIECCVEFITLISSEANEISDKEAK 67
Query: 66 KTLSGVDVIEGVKQIGF-EVIIEIL 89
KT++ + + ++ +GF E + +L
Sbjct: 68 KTIACDHITKALEVLGFSEYVPAVL 92
>DICTYBASE|DDB_G0269638 [details] [associations]
symbol:dr1 "putative histone-like transcription
factor" species:44689 "Dictyostelium discoideum" [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003712
"transcription cofactor activity" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR003958 InterPro:IPR009072 InterPro:IPR027113
Pfam:PF00808 dictyBase:DDB_G0269638 GO:GO:0005634 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0006355 GO:GO:0043565 GO:GO:0006351
Gene3D:1.10.20.10 SUPFAM:SSF47113 eggNOG:COG5150
PANTHER:PTHR11064:SF8 OMA:NKKTINA RefSeq:XP_646136.1 HSSP:Q01658
ProteinModelPortal:Q55DJ5 STRING:Q55DJ5 EnsemblProtists:DDB0216393
GeneID:8617086 KEGG:ddi:DDB_G0269638 ProtClustDB:CLSZ2729292
Uniprot:Q55DJ5
Length = 178
Score = 106 (42.4 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 25/77 (32%), Positives = 47/77 (61%)
Query: 6 DDLNLPSAIIQRLIKEALPKDAEGKINVSKDVRLAAGKAASLFILHLTTEALSIANEKNR 65
D+L+LP A + +LIKE LP+D + N ++D+ L + FI +++EA I + +
Sbjct: 9 DNLSLPKATVSKLIKEMLPQDVKCS-NETRDLIL---ECCVEFIHLISSEANDICGREQK 64
Query: 66 KTLSGVDVIEGVKQIGF 82
+T++ VI+ + ++GF
Sbjct: 65 RTIAAEHVIKALTELGF 81
>SGD|S000000117 [details] [associations]
symbol:HAP3 "Subunit of the Hap2p/3p/4p/5p CCAAT-binding
complex" species:4932 "Saccharomyces cerevisiae" [GO:0016602
"CCAAT-binding factor complex" evidence=IDA;IPI] [GO:0000436
"carbon catabolite activation of transcription from RNA polymerase
II promoter" evidence=IDA] [GO:0000978 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding"
evidence=IDA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0043457 "regulation of cellular respiration"
evidence=IMP] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR003956 InterPro:IPR003957 InterPro:IPR003958
InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615 PROSITE:PS00685
SGD:S000000117 GO:GO:0043565 GO:GO:0006351 EMBL:BK006936
Gene3D:1.10.20.10 SUPFAM:SSF47113 eggNOG:COG2036 GO:GO:0043457
GeneTree:ENSGT00550000074689 GO:GO:0000436 GO:GO:0016602
HOGENOM:HOG000211832 OrthoDB:EOG4N33Z8 PANTHER:PTHR11064:SF9
EMBL:M20318 EMBL:X74544 EMBL:Z35782 EMBL:AY558459 PIR:A28123
RefSeq:NP_009532.1 ProteinModelPortal:P13434 SMR:P13434
DIP:DIP-1362N IntAct:P13434 MINT:MINT-567883 STRING:P13434
PaxDb:P13434 EnsemblFungi:YBL021C GeneID:852260 KEGG:sce:YBL021C
CYGD:YBL021c OMA:NYIEPLK NextBio:970850 Genevestigator:P13434
GermOnline:YBL021C Uniprot:P13434
Length = 144
Score = 103 (41.3 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 30/86 (34%), Positives = 44/86 (51%)
Query: 10 LPSAIIQRLIKEALPKDAEGKINVSKDVRLAAGKAASLFILHLTTEALSIANEKNRKTLS 69
LP + RL+K LP A+ VSKD + + S I +T+EA RKT++
Sbjct: 42 LPINNVARLMKNTLPPSAK----VSKDAKECMQECVSELISFVTSEASDRCAADKRKTIN 97
Query: 70 GVDVIEGVKQIGFEVIIEILGKSYNA 95
G D++ + +GFE E+L K Y A
Sbjct: 98 GEDILISLHALGFENYAEVL-KIYLA 122
>TAIR|locus:2181529 [details] [associations]
symbol:NF-YB12 ""nuclear factor Y, subunit B12""
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR003958 InterPro:IPR009072 InterPro:IPR027113
Pfam:PF00808 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.20.10 SUPFAM:SSF47113
HOGENOM:HOG000178641 ProtClustDB:CLSN2719282 PANTHER:PTHR11064:SF8
HSSP:Q01658 EMBL:AF428400 EMBL:AY087017 EMBL:AY125544 EMBL:AK227164
IPI:IPI00535830 RefSeq:NP_568190.1 UniGene:At.23541
ProteinModelPortal:Q944I5 PRIDE:Q944I5 EnsemblPlants:AT5G08190.1
GeneID:830715 KEGG:ath:AT5G08190 TAIR:At5g08190 InParanoid:Q944I5
OMA:EVCNKED PhylomeDB:Q944I5 Genevestigator:Q944I5 Uniprot:Q944I5
Length = 163
Score = 103 (41.3 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 23/93 (24%), Positives = 55/93 (59%)
Query: 1 MAESLDDLNLPSAIIQRLIKEALPKDAEGKINVSKDVRLAAGKAASLFILHLTTEALSIA 60
+ +S +D +LP A + ++IKE LP D + V++D + + FI +++E+ +
Sbjct: 7 VGKSKEDASLPKATMTKIIKEMLPAD----VRVARDAQDLLIECCVEFINLISSESNEVC 62
Query: 61 NEKNRKTLSGVDVIEGVKQIGFEVIIEILGKSY 93
N+++++T++ V++ ++ +GF +E + +Y
Sbjct: 63 NKEDKRTIAPEHVLKALQVLGFGEYVEEVYAAY 95
>TAIR|locus:2178307 [details] [associations]
symbol:NF-YB13 ""nuclear factor Y, subunit B13""
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR003958 InterPro:IPR009072 InterPro:IPR027113
Pfam:PF00808 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0043565 EMBL:AB006708 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.20.10 SUPFAM:SSF47113 EMBL:D38110 EMBL:AY057709
EMBL:AY116960 IPI:IPI00529408 PIR:S53582 RefSeq:NP_851060.1
RefSeq:NP_851061.1 UniGene:At.270 ProteinModelPortal:P49592
SMR:P49592 STRING:P49592 PaxDb:P49592 PRIDE:P49592
EnsemblPlants:AT5G23090.1 EnsemblPlants:AT5G23090.2 GeneID:832373
KEGG:ath:AT5G23090 TAIR:At5g23090 eggNOG:COG5150
HOGENOM:HOG000178641 InParanoid:P49592 OMA:NDVCNKE PhylomeDB:P49592
ProtClustDB:CLSN2719282 Genevestigator:P49592 PANTHER:PTHR11064:SF8
Uniprot:P49592
Length = 159
Score = 103 (41.3 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 24/93 (25%), Positives = 55/93 (59%)
Query: 1 MAESLDDLNLPSAIIQRLIKEALPKDAEGKINVSKDVRLAAGKAASLFILHLTTEALSIA 60
+ +S +D +LP A + ++IKE LP D + V++D + + FI +++E+ +
Sbjct: 7 VGKSKEDASLPKATMTKIIKEMLPPD----VRVARDAQDLLIECCVEFINLVSSESNDVC 62
Query: 61 NEKNRKTLSGVDVIEGVKQIGFEVIIEILGKSY 93
N+++++T++ V++ ++ +GF IE + +Y
Sbjct: 63 NKEDKRTIAPEHVLKALQVLGFGEYIEEVYAAY 95
>ASPGD|ASPL0000061732 [details] [associations]
symbol:AN1225 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR003958 InterPro:IPR009072
Pfam:PF00808 GO:GO:0005634 EMBL:BN001308 GO:GO:0043565
EMBL:AACD01000017 Gene3D:1.10.20.10 SUPFAM:SSF47113
eggNOG:NOG150487 OrthoDB:EOG4TQQKQ RefSeq:XP_658829.1
ProteinModelPortal:Q5BE05 EnsemblFungi:CADANIAT00001399
GeneID:2877002 KEGG:ani:AN1225.2 HOGENOM:HOG000207717 OMA:HANEATL
Uniprot:Q5BE05
Length = 280
Score = 108 (43.1 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 32/98 (32%), Positives = 52/98 (53%)
Query: 4 SLDDLNLPSAIIQRLIKEALPKDAEGKINVSKDVRLAAGKAASLFILHLTTEALSIANEK 63
S++D LP +I RL K LP + +V KD LA KAA++F+ +L++ A NE
Sbjct: 36 SIEDYLLPRSITLRLAKSVLPPNT----SVQKDAVLAIQKAATVFVSYLSSHA----NEA 87
Query: 64 N-RKTLSGVDVIEGVKQIGFEVIIEILGKSYNAAVSIK 100
++T+S DV+ + ++ FE L K + +K
Sbjct: 88 TLKRTVSPADVLNALSELEFEGFRPRLEKELDKFTDLK 125
>FB|FBgn0032816 [details] [associations]
symbol:Nf-YB "Nuclear factor Y-box B" species:7227
"Drosophila melanogaster" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0016602
"CCAAT-binding factor complex" evidence=ISS] [GO:0006351
"transcription, DNA-dependent" evidence=ISS] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
GO:GO:0005634 EMBL:AE014134 GO:GO:0043565 Gene3D:1.10.20.10
SUPFAM:SSF47113 eggNOG:COG2036 GeneTree:ENSGT00550000074689
PANTHER:PTHR11064:SF9 HSSP:P25208 EMBL:AY070968 EMBL:AY094930
RefSeq:NP_609997.1 UniGene:Dm.6186 SMR:Q8ST61 IntAct:Q8ST61
MINT:MINT-940508 STRING:Q8ST61 EnsemblMetazoa:FBtr0081289
GeneID:35261 KEGG:dme:Dmel_CG10447 UCSC:CG10447-RA CTD:35261
FlyBase:FBgn0032816 InParanoid:Q8ST61 OMA:LPICNII OrthoDB:EOG4RFJ8X
GenomeRNAi:35261 NextBio:792674 Uniprot:Q8ST61
Length = 156
Score = 101 (40.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 27/83 (32%), Positives = 48/83 (57%)
Query: 7 DLNLPSAIIQRLIKEALPKDAEGKINVSKDVRLAAGKAASLFILHLTTEALSIANEKNRK 66
D LP I +++K +P++ GKI +KD R + S FI +++EA+ + +NRK
Sbjct: 40 DRFLPICNIIKIMKVPVPQN--GKI--AKDARECIQECVSEFISFISSEAIERSVAENRK 95
Query: 67 TLSGVDVIEGVKQIGFEVIIEIL 89
T++G D++ +GF+ +E L
Sbjct: 96 TVNGDDLLVAFSNLGFDNYVEPL 118
>TAIR|locus:2038648 [details] [associations]
symbol:NF-YB11 ""nuclear factor Y, subunit B11""
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.20.10 SUPFAM:SSF47113 EMBL:AC006232 KO:K02326
OMA:HANEATL HSSP:Q13952 EMBL:BT004083 IPI:IPI00535292 PIR:C84673
RefSeq:NP_180316.1 UniGene:At.26474 UniGene:At.48523
ProteinModelPortal:Q9ZQH2 SMR:Q9ZQH2 PaxDb:Q9ZQH2 PRIDE:Q9ZQH2
EnsemblPlants:AT2G27470.1 GeneID:817292 KEGG:ath:AT2G27470
TAIR:At2g27470 eggNOG:NOG301039 HOGENOM:HOG000154037
InParanoid:Q9ZQH2 PhylomeDB:Q9ZQH2 ProtClustDB:CLSN2913083
ArrayExpress:Q9ZQH2 Genevestigator:Q9ZQH2 Uniprot:Q9ZQH2
Length = 275
Score = 105 (42.0 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 23/84 (27%), Positives = 48/84 (57%)
Query: 10 LPSAIIQRLIKEALPK-DAEGKINVSKDVRLAAGKAASLFILHLTTEALSIANEKNRKTL 68
LP AI++R++K+ L + + +++ K+ LA ++A +FI +L+ A + R+T+
Sbjct: 11 LPLAIVRRVVKKKLSECSPDYDVSIHKEALLAFSESARIFIHYLSATANDFCKDARRQTM 70
Query: 69 SGVDVIEGVKQIGFEVIIEILGKS 92
DV + ++++ F +E L S
Sbjct: 71 KADDVFKALEEMDFSEFLEPLKSS 94
>TAIR|locus:2043293 [details] [associations]
symbol:NF-YB5 ""nuclear factor Y, subunit B5""
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] InterPro:IPR003956 InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
PROSITE:PS00685 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
EMBL:AC005309 Gene3D:1.10.20.10 SUPFAM:SSF47113 eggNOG:COG2036
HOGENOM:HOG000211832 PANTHER:PTHR11064:SF9 EMBL:BT003968
EMBL:BT005081 IPI:IPI00540695 PIR:G84919 RefSeq:NP_182302.1
UniGene:At.36317 ProteinModelPortal:O82248 SMR:O82248 IntAct:O82248
STRING:O82248 PRIDE:O82248 EnsemblPlants:AT2G47810.1 GeneID:819393
KEGG:ath:AT2G47810 GeneFarm:5135 TAIR:At2g47810 InParanoid:O82248
OMA:ICWAMAN PhylomeDB:O82248 ProtClustDB:CLSN2913222
Genevestigator:O82248 GermOnline:AT2G47810 Uniprot:O82248
Length = 160
Score = 99 (39.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 27/83 (32%), Positives = 46/83 (55%)
Query: 1 MAESLDDLNLPSAIIQRLIKEALPKDAEGKINVSKDVRLAAGKAASLFILHLTTEALSIA 60
M + D L LP A + R++K LP +A+ VSK+ + + S FI +T EA
Sbjct: 48 MVKEQDRL-LPIANVGRIMKNILPANAK----VSKEAKETMQECVSEFISFVTGEASDKC 102
Query: 61 NEKNRKTLSGVDVIEGVKQIGFE 83
+++ RKT++G D+ + +GF+
Sbjct: 103 HKEKRKTVNGDDICWAMANLGFD 125
>UNIPROTKB|Q8W0W9 [details] [associations]
symbol:Dr1 "Repressor protein" species:4530 "Oryza sativa"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR003958
InterPro:IPR009072 InterPro:IPR027113 Pfam:PF00808 GO:GO:0005634
GO:GO:0043565 Gene3D:1.10.20.10 SUPFAM:SSF47113
PANTHER:PTHR11064:SF8 HSSP:Q01658 EMBL:AF464902
ProteinModelPortal:Q8W0W9 IntAct:Q8W0W9 KEGG:dosa:Os08t0383700-02
Gramene:Q8W0W9 Genevestigator:Q8W0W9 Uniprot:Q8W0W9
Length = 296
Score = 105 (42.0 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 24/93 (25%), Positives = 54/93 (58%)
Query: 1 MAESLDDLNLPSAIIQRLIKEALPKDAEGKINVSKDVRLAAGKAASLFILHLTTEALSIA 60
+ +S +D++LP + + ++IKE LP D + V++D + + FI L++E+ +
Sbjct: 7 VGKSKEDVSLPKSTMFKIIKEMLPPD----VRVARDAQDLLVECCVEFINLLSSESNEVC 62
Query: 61 NEKNRKTLSGVDVIEGVKQIGFEVIIEILGKSY 93
+ +++KT++ V+ ++ +GF IE + +Y
Sbjct: 63 SREDKKTIAPEHVLRALQDLGFREYIEEVQAAY 95
>SGD|S000002805 [details] [associations]
symbol:NCB2 "Subunit of a heterodimeric NC2 transcription
regulator complex" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA;IPI] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IGI;IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0017054 "negative cofactor 2 complex"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0003713
"transcription coactivator activity" evidence=IDA] [GO:0003712
"transcription cofactor activity" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IGI;IMP] InterPro:IPR003958 InterPro:IPR009072
InterPro:IPR027113 Pfam:PF00808 SGD:S000002805 GO:GO:0003714
GO:GO:0043565 GO:GO:0045944 EMBL:BK006938 GO:GO:0006351
GO:GO:0000122 GO:GO:0003713 Gene3D:1.10.20.10 SUPFAM:SSF47113
EMBL:U32274 eggNOG:COG5150 HOGENOM:HOG000178641
PANTHER:PTHR11064:SF8 GeneTree:ENSGT00550000075010 HSSP:Q01658
OrthoDB:EOG41NXWS GO:GO:0017054 EMBL:U91948 EMBL:Y09266 PIR:S69694
RefSeq:NP_010685.1 ProteinModelPortal:Q92317 SMR:Q92317
DIP:DIP-2067N IntAct:Q92317 MINT:MINT-528090 STRING:Q92317
PaxDb:Q92317 EnsemblFungi:YDR397C GeneID:852006 KEGG:sce:YDR397C
CYGD:YDR397c NextBio:970198 Genevestigator:Q92317
GermOnline:YDR397C Uniprot:Q92317
Length = 146
Score = 97 (39.2 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 25/89 (28%), Positives = 50/89 (56%)
Query: 1 MAESLDDLNLPSAIIQRLIKEALPKDAEGKINVSKDVRLAAGKAASLFILHLTTEALSIA 60
MA D+++LP A +Q++I E L +D + +KD R + FI+ L++ A +A
Sbjct: 1 MAGDSDNVSLPKATVQKMISEILDQD----LMFTKDAREIIINSGIEFIMILSSMASEMA 56
Query: 61 NEKNRKTLSGVDVIEGVKQIGFEVIIEIL 89
+ + +KT++ VI+ ++++ + I L
Sbjct: 57 DNEAKKTIAPEHVIKALEELEYNEFIPFL 85
>GENEDB_PFALCIPARUM|PF11_0477 [details] [associations]
symbol:PF11_0477 "CCAAT-box DNA binding protein
subunit B" species:5833 "Plasmodium falciparum" [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR003957 InterPro:IPR003958 InterPro:IPR009072
Pfam:PF00808 PRINTS:PR00615 GO:GO:0005634 GO:GO:0043565
Gene3D:1.10.20.10 SUPFAM:SSF47113 EMBL:AE014186 HSSP:P25208
RefSeq:XP_001348144.1 ProteinModelPortal:Q8IHQ2 SMR:Q8IHQ2
IntAct:Q8IHQ2 MINT:MINT-1610835 EnsemblProtists:PF11_0477:mRNA
GeneID:811020 KEGG:pfa:PF11_0477 EuPathDB:PlasmoDB:PF3D7_1146600
OMA:TNETNQT Uniprot:Q8IHQ2
Length = 1301
Score = 109 (43.4 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 29/91 (31%), Positives = 48/91 (52%)
Query: 10 LPSAIIQRLIKEALPKDAEGKINVSKDVRLAAGKAASLFILHLTTEALSIANEKNRKTLS 69
LP A I R++K LP G V+K+ + + + FI LT+EA + RKT++
Sbjct: 1134 LPIANISRIMKRILP----GSAKVAKESKDIIRECVTEFIQFLTSEASDRCTREKRKTIN 1189
Query: 70 GVDVIEGVKQIGFEVIIEILGKSYNAAVSIK 100
G D++ ++++GF IE L + N +K
Sbjct: 1190 GEDILYSMEKLGFNDYIEPLTEYLNKWKQLK 1220
>POMBASE|SPBC30D10.02 [details] [associations]
symbol:SPBC30D10.02 "transcription corepressor
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=NAS] [GO:0000785 "chromatin" evidence=NAS]
[GO:0003714 "transcription corepressor activity" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] InterPro:IPR003958 InterPro:IPR009072
InterPro:IPR027113 Pfam:PF00808 PomBase:SPBC30D10.02 GO:GO:0005829
GO:GO:0005634 GO:GO:0003714 EMBL:CU329671 GO:GO:0043565
GO:GO:0000785 GenomeReviews:CU329671_GR GO:GO:0000122
Gene3D:1.10.20.10 SUPFAM:SSF47113 eggNOG:COG5150
HOGENOM:HOG000178641 PANTHER:PTHR11064:SF8 OMA:NKKTINA HSSP:Q01658
PIR:T40194 RefSeq:NP_596283.1 ProteinModelPortal:O14348
STRING:O14348 EnsemblFungi:SPBC30D10.02.1 GeneID:2540406
KEGG:spo:SPBC30D10.02 OrthoDB:EOG41NXWS NextBio:20801533
Uniprot:O14348
Length = 161
Score = 94 (38.1 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 24/85 (28%), Positives = 48/85 (56%)
Query: 6 DDLNLPSAIIQRLIKEALPKDAEGKINVSKDVRLAAGKAASLFILHLTTEALSIANEKNR 65
D+L+LP A +Q+++ + LP D + +K+ R + FI +++EA I ++ +
Sbjct: 8 DELSLPKATVQKMVSDILPVD----LTFTKEARDLLIECCVEFIHLVSSEANEICEKEAK 63
Query: 66 KTLSGVDVIEGVKQIGF-EVIIEIL 89
KT++ +I+ ++ + F E I E L
Sbjct: 64 KTIAAEHIIKALENLEFKEYIAEAL 88
>SGD|S000005885 [details] [associations]
symbol:HAP5 "Subunit of the Hap2p/3p/4p/5p CCAAT-binding
complex" species:4932 "Saccharomyces cerevisiae" [GO:0003677 "DNA
binding" evidence=IEA;IPI] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001077 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=IC;ISA] [GO:0043457 "regulation of cellular
respiration" evidence=IGI] [GO:0016602 "CCAAT-binding factor
complex" evidence=IEA;IDA;IPI] [GO:0000436 "carbon catabolite
activation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0000978 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR007125 InterPro:IPR009072 InterPro:IPR027170
Pfam:PF00125 SGD:S000005885 EMBL:BK006948 GO:GO:0003677
GO:GO:0001077 Gene3D:1.10.20.10 SUPFAM:SSF47113 eggNOG:COG5208
GO:GO:0043457 GeneTree:ENSGT00530000063560 GO:GO:0000436
GO:GO:0016602 OrthoDB:EOG4BS0W7 PANTHER:PTHR10252:SF8 EMBL:U19932
EMBL:Z75266 PIR:S67270 RefSeq:NP_015003.1 ProteinModelPortal:Q02516
SMR:Q02516 DIP:DIP-1363N IntAct:Q02516 MINT:MINT-406466
STRING:Q02516 EnsemblFungi:YOR358W GeneID:854540 KEGG:sce:YOR358W
CYGD:YOR358w NextBio:976943 Genevestigator:Q02516
GermOnline:YOR358W Uniprot:Q02516
Length = 242
Score = 92 (37.4 bits), Expect = 0.00046, P = 0.00046
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 2 AESLDDLNLPSAIIQRLIKEALPKDAEGKINVSKDVRLAAGKAASLFILHLTTEALSIAN 61
+E DD S R I++ + D + K+ +S + + KA +FI LT A +A
Sbjct: 149 SEHQDDFKSHSLPFAR-IRKVMKTDEDVKM-ISAEAPIIFAKACEIFITELTMRAWCVAE 206
Query: 62 EKNRKTLSGVDVIEGVKQIG-FEVIIEIL 89
R+TL D+ E +++ F+ +I+++
Sbjct: 207 RNKRRTLQKADIAEALQKSDMFDFLIDVV 235
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.132 0.338 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 103 103 0.00091 102 3 10 23 0.43 30
29 0.49 31
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 66
No. of states in DFA: 501 (53 KB)
Total size of DFA: 104 KB (2073 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 14.93u 0.17s 15.10t Elapsed: 00:00:00
Total cpu time: 14.94u 0.17s 15.11t Elapsed: 00:00:00
Start: Thu Aug 15 13:46:14 2013 End: Thu Aug 15 13:46:14 2013