RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy13692
(592 letters)
>d2gjxa1 c.1.8.6 (A:167-528) beta-hexosaminidase A {Human (Homo
sapiens) [TaxId: 9606]}
Length = 362
Score = 314 bits (806), Expect = e-103
Identities = 165/366 (45%), Positives = 225/366 (61%), Gaps = 17/366 (4%)
Query: 163 FPHRGLLVDGSRHYLPIKAIKKQLDIMSYNKLNVLHWHLVDDQSFPYESKKFPSLSLKGA 222
FPHRGLL+D SRHYLP+ +I LD+M+YNKLNV HWHLVDD SFPYES FP L KG+
Sbjct: 1 FPHRGLLLDTSRHYLPLSSILDTLDVMAYNKLNVFHWHLVDDPSFPYESFTFPELMRKGS 60
Query: 223 FGP-DAIYTEKMIKNVIEYARLRGIRVIPEIDTPGHTDSMEPGMPQIHCHCPHRVEGKTF 281
+ P IYT + +K VIEYARLRGIRV+ E DTPGHT S PG+P + C E
Sbjct: 61 YNPVTHIYTAQDVKEVIEYARLRGIRVLAEFDTPGHTLSWGPGIPGLLTPCYSGSEPSGT 120
Query: 282 VGPLDPTKNVTLDFVRDLFTELGQRFPESYVHLGGDEVDFFCWEQNPEIKAFMSTRQW-- 339
GP++P+ N T +F+ F E+ FP+ Y+HLGGDEVDF CW+ NPEI+ FM + +
Sbjct: 121 FGPVNPSLNNTYEFMSTFFLEVSSVFPDFYLHLGGDEVDFTCWKSNPEIQDFMRKKGFGE 180
Query: 340 DGPQLQSYYMQYLLKAIKTIRKRSVVWEEVFQDWKNVNGDAQAMSMDKDTIVQVWRGGGL 399
D QL+S+Y+Q LL + + K VVW+EVF + + + DTI+QVWR
Sbjct: 181 DFKQLESFYIQTLLDIVSSYGKGYVVWQEVFDN---------KVKIQPDTIIQVWREDIP 231
Query: 400 EGASAAVKRVVSAGYKVI--NSIGWYLDNLEQEFETYHGIRVGSIDLTPEEKKLFLGGEA 457
++ V AG++ + + +++ ++ + + + TPE+K L +GGEA
Sbjct: 232 VNYMKELELVTKAGFRALLSAPWYLNRISYGPDWKDFYVVEPLAFEGTPEQKALVIGGEA 291
Query: 458 CMWGEKVDETNIESRVWPRACAAAEHLWSSPQPSN--NTKNRITEHVCRLKRRNVQAAPV 515
CMWGE VD TN+ R+WPRA A AE LWS+ S+ R++ C L RR VQA P+
Sbjct: 292 CMWGEYVDNTNLVPRLWPRAGAVAERLWSNKLTSDLTFAYERLSHFRCELLRRGVQAQPL 351
Query: 516 YDISYC 521
++ +C
Sbjct: 352 -NVGFC 356
>d1nowa1 c.1.8.6 (A:200-552) beta-hexosaminidase B {Human (Homo
sapiens) [TaxId: 9606]}
Length = 353
Score = 305 bits (781), Expect = e-100
Identities = 165/366 (45%), Positives = 226/366 (61%), Gaps = 19/366 (5%)
Query: 163 FPHRGLLVDGSRHYLPIKAIKKQLDIMSYNKLNVLHWHLVDDQSFPYESKKFPSLSLKGA 222
F HRG+L+D SRHYLP+K I K LD M++NK NVLHWH+VDDQSFPY+S FP LS KG+
Sbjct: 1 FSHRGILIDTSRHYLPVKIILKTLDAMAFNKFNVLHWHIVDDQSFPYQSITFPELSNKGS 60
Query: 223 FGPDAIYTEKMIKNVIEYARLRGIRVIPEIDTPGHTDSMEPGMPQIHCHCPHRVEGKTFV 282
+ +YT ++ VIEYARLRGIRV+PE DTPGHT S G + C R
Sbjct: 61 YSLSHVYTPNDVRMVIEYARLRGIRVLPEFDTPGHTLSWGKGQKDLLTPCYSRQNKLDSF 120
Query: 283 GPLDPTKNVTLDFVRDLFTELGQRFPESYVHLGGDEVDFFCWEQNPEIKAFMSTRQW--D 340
GP++PT N T F+ F E+ + FP+ ++HLGGDEV+F CWE NP+I+ FM + + D
Sbjct: 121 GPINPTLNTTYSFLTTFFKEISEVFPDQFIHLGGDEVEFKCWESNPKIQDFMRQKGFGTD 180
Query: 341 GPQLQSYYMQYLLKAIKTIRKRSVVWEEVFQDWKNVNGDAQAMSMDKDTIVQVWRGGGLE 400
+L+S+Y+Q +L I TI K S+VW+EVF + TIV+VW+
Sbjct: 181 FKKLESFYIQKVLDIIATINKGSIVWQEVFD---------DKAKLAPGTIVEVWKDS--- 228
Query: 401 GASAAVKRVVSAGYKVINSIGWYLDNLE--QEFETYHGIRVGSIDLTPEEKKLFLGGEAC 458
+ RV ++G+ VI S WYLD + Q++ Y+ + T ++K+LF+GGEAC
Sbjct: 229 AYPEELSRVTASGFPVILSAPWYLDLISYGQDWRKYYKVEPLDFGGTQKQKQLFIGGEAC 288
Query: 459 MWGEKVDETNIESRVWPRACAAAEHLWSSPQPSN--NTKNRITEHVCRLKRRNVQAAPVY 516
+WGE VD TN+ R+WPRA A E LWSS + + +R+T H CR+ R + A P+Y
Sbjct: 289 LWGEYVDATNLTPRLWPRASAVGERLWSSKDVRDMDDAYDRLTRHRCRMVERGIAAQPLY 348
Query: 517 DISYCS 522
YC+
Sbjct: 349 -AGYCN 353
>d1jaka1 c.1.8.6 (A:151-506) beta-N-acetylhexosaminidase
{Streptomyces plicatus [TaxId: 1922]}
Length = 356
Score = 243 bits (621), Expect = 5e-76
Identities = 85/382 (22%), Positives = 137/382 (35%), Gaps = 55/382 (14%)
Query: 163 FPHRGLLVDGSRHYLPIKAIKKQLDIMSYNKLNVLHWHLVDDQSFPYESKKFPSLSLKGA 222
+ R ++D SRH+ + +K+ +D ++ K N LH HL DDQ + +P L+ G
Sbjct: 1 YAWRSAMLDVSRHFFGVDEVKRYIDRVARYKYNKLHLHLSDDQGWRIAIDSWPRLATYGG 60
Query: 223 F-----GPDAIYTEKMIKNVIEYARLRGIRVIPEIDTPGHTDSMEPGMPQIHCHC---PH 274
GP YT+ K ++ YA R + V+PEID PGHT++ +++C P
Sbjct: 61 STEVGGGPGGYYTKAEYKEIVRYAASRHLEVVPEIDMPGHTNAALASYAELNCDGVAPPL 120
Query: 275 RVEGKTFVGPLDPTKNVTLDFVRDLFTELGQRFPESYVHLGGDEVDFFCWEQNPEIKAFM 334
K L K+VT DFV D+ EL P Y+H+GGDE
Sbjct: 121 YTGTKVGFSSLCVDKDVTYDFVDDVIGELAALTPGRYLHIGGDEAHSTPKAD-------- 172
Query: 335 STRQWDGPQLQSYYMQYLLKAIKTIRKRSVVWEEVFQDWKNVNGDAQAMSMDKDTIVQVW 394
+M+ + + K V W ++ + +VQ W
Sbjct: 173 ----------FVAFMKRVQPIVAKYGKTVVGWHQLA-----------GAEPVEGALVQYW 211
Query: 395 RG-GGLEGASAAVKRVVSAGYKVINSIGWYLD-NLEQEFETYHGIRVGSI---------- 442
+ A V G +I S +++ +T G+
Sbjct: 212 GLDRTGDAEKAEVAEAARNGTGLILSPADRTYLDMKYTKDTPLGLSWAGYVEVQRSYDWD 271
Query: 443 ---DLTPEEKKLFLGGEACMWGEKV-DETNIESRVWPRACAAAEHLWSSPQPSN--NTKN 496
L G EA +W E + D ++ +PR AE WS + K
Sbjct: 272 PAGYLPGAPADAVRGVEAPLWTETLSDPDQLDYMAFPRLPGVAELGWSPASTHDWDTYKV 331
Query: 497 RITEHVCRLKRRNVQAAPVYDI 518
R+ + + +
Sbjct: 332 RLAAQAPYWEAAGIDFYRSPQV 353
>d1yhta1 c.1.8.6 (A:16-359) Dispersin B, DspB {Actinobacillus
actinomycetemcomitans [TaxId: 714]}
Length = 344
Score = 230 bits (586), Expect = 6e-71
Identities = 57/364 (15%), Positives = 126/364 (34%), Gaps = 64/364 (17%)
Query: 165 HRGLLVDGSRHYLPIKAIKKQLDIMSYNKLNVLHWHLVDDQSFPYESKKFPSLSLKGAFG 224
GL++D +RH+ + IK +D +S + N LH H D +++ ES + G
Sbjct: 3 QTGLMLDIARHFYSPEVIKSFIDTISLSGGNFLHLHFSDHENYAIESHLLNQRAENAVQG 62
Query: 225 PDAI----------YTEKMIKNVIEYARLRGIRVIPEIDTPGHTDSMEPGMPQIHC-HCP 273
D I + + + ++ YA+ +GI +IPE+D+P H ++ + +
Sbjct: 63 KDGIYINPYTGKPFLSYRQLDDIKAYAKAKGIELIPELDSPNHMTAIFKLVQKDRGVKYL 122
Query: 274 HRVEGKTFVGPLDPTKNVTLDFVRDLFTELGQRFPES--YVHLGGDEVDFFCWEQNPEIK 331
++ + +D T ++ F++ L +E+ F ++ + H+GGDE + + I
Sbjct: 123 QGLKSRQVDDEIDITNADSITFMQSLMSEVIDIFGDTSQHFHIGGDEFGYSVESNHEFIT 182
Query: 332 AFMSTRQWDGPQLQSYYMQYLLKAIKTIRKRSVVWEEVFQDWKNVNGDAQAMSMDKDTIV 391
+ ++ ++ +W + ++ + +
Sbjct: 183 YANKLSYF----------------LEKKGLKTRMWNDGLIKNTFEQ-------INPNIEI 219
Query: 392 QVWRGGGL----------EGASAAVKRVVSAGYKVINSIGWYL------------DNLEQ 429
W G ++ +++ G+ V+N +YL D
Sbjct: 220 TYWSYDGDTQDKNEAAERRDMRVSLPELLAKGFTVLNYNSYYLYIVPKASPTFSQDAAFA 279
Query: 430 EFETYHGIRVGSID-----LTPEEKKLFLGGEACMWGEKVDETNIESRVWPRACAAAEHL 484
+ +G D + G +WGE + + + E +
Sbjct: 280 AKDVIKNWDLGVWDGRNTKNRVQNTHEIAGAALSIWGEDAKALK-DETIQKNTKSLLEAV 338
Query: 485 WSSP 488
Sbjct: 339 IHKT 342
>d1qbaa3 c.1.8.6 (A:338-780) Bacterial chitobiase
(beta-N-acetylhexosaminidase) {Serratia marcescens
[TaxId: 615]}
Length = 443
Score = 224 bits (571), Expect = 1e-67
Identities = 79/434 (18%), Positives = 137/434 (31%), Gaps = 113/434 (26%)
Query: 163 FPHRGLLVDGSRHYLPIKAIKKQLDIMSYNKLNVLHWHLVDDQSFPYESKKFPSLSLKGA 222
FP+RG+ +D +R++ A+ + LD M+ KLN H+HL DD+ + E P L+ G
Sbjct: 1 FPYRGIFLDVARNFHKKDAVLRLLDQMAAYKLNKFHFHLSDDEGWRIEIPGLPELTEVGG 60
Query: 223 F--------------------GPDAIYTEKMIKNVIEYARLRGIRVIPEIDTPGHTDSME 262
++ + ++I+YA+ R I VIPEID P H +
Sbjct: 61 QRCHDLSETTCLLPQYGQGPDVYGGFFSRQDYIDIIKYAQARQIEVIPEIDMPAHARAAV 120
Query: 263 PGMPQIHCHC----------------------PHRVEGKTFVGPLDPTKNVTLDFVRDLF 300
M + V+ L+P + + FV +
Sbjct: 121 VSMEARYKKLHAAGKEQEANEFRLVDPTDTSNTTSVQFFNRQSYLNPCLDSSQRFVDKVI 180
Query: 301 TELGQRFPES-----YVHLGGDEV--------------------------DFFCWEQNPE 329
E+ Q E+ H GGDE + W ++
Sbjct: 181 GEIAQMHKEAGQPIKTWHFGGDEAKNIRLGAGYTDKAKPEPGKGIIDQGNEDKPWAKSQV 240
Query: 330 IKAFMSTRQ-WDGPQLQSYYMQYLLKAIKTIRKRSVVWEEVFQDWKNVNGDAQAMSMDKD 388
+ + + D L SY+ Q + K +K + + + + +
Sbjct: 241 CQTMIKEGKVADMEHLPSYFGQEVSKLVKAHGIDRMQAWQDGLKDAESSKAFATSRVGVN 300
Query: 389 TIVQVWRGGGLEGASAAVKRVVSAGYKVINSIG--WYLDNLEQEFETYHGIRVGS----- 441
++ GG A K Y+V+ S Y+D + G G+
Sbjct: 301 FWDTLYWGGFDSVNDWANKG-----YEVVVSNPDYVYMDFPYEVNPDERGYYWGTRFSDE 355
Query: 442 --------------------------IDLTPEEKKLFLGGEACMWGEKV-DETNIESRVW 474
+ + G A +W E + +E ++
Sbjct: 356 RKVFSFAPDNMPQNAETSVDRDGNHFNAKSDKPWPGAYGLSAQLWSETQRTDPQMEYMIF 415
Query: 475 PRACAAAEHLWSSP 488
PRA + AE W
Sbjct: 416 PRALSVAERSWHRA 429
>d1nowa2 d.92.2.1 (A:55-199) beta-hexosaminidase B, N-terminal
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 145
Score = 78.4 bits (192), Expect = 7e-18
Identities = 38/117 (32%), Positives = 56/117 (47%), Gaps = 3/117 (2%)
Query: 45 KVSGKSCDILEDAILRYTEILKTNWRNLTKFDSVVTAPNIVGKTIKLKIRLLNECEKYPH 104
+G SC +LE+A RY + + + + + I L +EC+ +P+
Sbjct: 31 STAGPSCTLLEEAFRRYHGYIFGF--YKWHHEPAEFQAKTQVQQLLVSITLQSECDAFPN 88
Query: 105 IDMDEKYTLEIKNSSCLLTSQSIWGILRGLETFSQLPIPAPNGDQLIIRVQTIEDFP 161
I DE YTL +K +L + +WG LRGLETFSQL + + I TI D P
Sbjct: 89 ISSDESYTLLVKEPVAVLKANRVWGALRGLETFSQL-VYQDSYGTFTINESTIIDSP 144
>d2gjxa2 d.92.2.1 (A:23-166) beta-hexosaminidase A {Human (Homo
sapiens) [TaxId: 9606]}
Length = 144
Score = 72.2 bits (176), Expect = 1e-15
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 3/115 (2%)
Query: 47 SGKSCDILEDAILRYTEILKTNWRNLTKFDSVVTAPNIVGKTIKLKIRLLNECEKYPHID 106
+ C +L++A RY ++L + + + + K + + + C + P ++
Sbjct: 32 AQPGCSVLDEAFQRYRDLLFGS--GSWPRPYLTGKRHTLEKNVLVVSVVTPGCNQLPTLE 89
Query: 107 MDEKYTLEIKNSSCLLTSQSIWGILRGLETFSQLPIPAPNGDQLIIRVQTIEDFP 161
E YTL I + CLL S+++WG LRGLETFSQL + I IEDFP
Sbjct: 90 SVENYTLTINDDQCLLLSETVWGALRGLETFSQL-VWKSAEGTFFINKTEIEDFP 143
>d1qbaa4 d.92.2.1 (A:201-337) Bacterial chitobiase, Domain 2
{Serratia marcescens [TaxId: 615]}
Length = 137
Score = 47.8 bits (113), Expect = 3e-07
Identities = 22/123 (17%), Positives = 42/123 (34%), Gaps = 7/123 (5%)
Query: 40 EPFLFKVSGKSCDILEDAILRYTEILKTNWRNLTK-FDSVVTAPNIVGKTIKLKIRLLNE 98
P KV + D+ + L + ++K +++ F + G IK I+
Sbjct: 20 TPMQVKVHAQDADLRKGVALDLSTLVKPAADVVSQRFALLGVPVQTNGYPIKTDIQP--- 76
Query: 99 CEKYPHIDMDEKYTLEIKNSSCLLTSQSIWGILRGLETFSQLPIPAPNGDQLIIRVQTIE 158
+ + + Y L+I + G+ GL++ L P+ I
Sbjct: 77 GKFKGAMAVSGAYELKIGKKEAQVIGFDQAGVFYGLQSILSL---VPSDGSGKIATLDAS 133
Query: 159 DFP 161
D P
Sbjct: 134 DAP 136
>d2cbia3 d.92.2.3 (A:41-178) Hyaluronidase N-terminal domain
{Clostridium perfringens [TaxId: 1502]}
Length = 138
Score = 45.5 bits (107), Expect = 2e-06
Identities = 21/111 (18%), Positives = 37/111 (33%), Gaps = 7/111 (6%)
Query: 52 DILEDAILRYTEILKTNWRNLTKFDSVVTAPNIVGKTIKLKIRL-LNECEKYPHIDMDEK 110
+ E+A+ E L N + + + I+G+ L +E
Sbjct: 33 EADENAVNALREFLTANNIEINSENDPNSTTLIIGEVDDDIPELDEALNGTTAENLKEEG 92
Query: 111 YTLEIKNSSCLLTSQSIWGILRGLETFSQLPIPAPNGDQLIIRVQTIEDFP 161
Y L + + + G G++TF QL + I I D+P
Sbjct: 93 YALVSNDGKIAIEGKDGDGTFYGVQTFKQL------VKESNIPEVNITDYP 137
>d1jaka2 d.92.2.1 (A:8-150) beta-N-acetylhexosaminidase, N-terminal
domain {Streptomyces plicatus [TaxId: 1922]}
Length = 143
Score = 37.4 bits (86), Expect = 0.001
Identities = 26/104 (25%), Positives = 40/104 (38%), Gaps = 15/104 (14%)
Query: 63 EILKTNWRNLTKFDSVVTAPNIVGKTIKLKIRLLNECEKYPHIDMDEKYTLEIKNSSCLL 122
+ L R T + VTA G ++L DE Y L+ + +
Sbjct: 49 DYLADLLRPATGYRLPVTAHGHGGIRLRLAGGPYG----------DEGYRLDSGPAGVTI 98
Query: 123 TSQSIWGILRGLETFSQLPIPAPNGD-----QLIIRVQTIEDFP 161
T++ G+ G++T QL PA D ++ TIED P
Sbjct: 99 TARKAAGLFHGVQTLRQLLPPAVEKDSAQPGPWLVAGGTIEDTP 142
>d2choa3 d.92.2.3 (A:5-126) Glucosaminidase GH84, N-terminal domain
{Bacteroides thetaiotaomicron [TaxId: 818]}
Length = 122
Score = 33.6 bits (76), Expect = 0.020
Identities = 20/110 (18%), Positives = 36/110 (32%), Gaps = 16/110 (14%)
Query: 52 DILEDAILRYTEILKTNWRNLTKFDSVVTAPNIVGKTIKLKIRLLNECEKYPHIDMDEKY 111
+ A+ E+L + +G+ +R + D E Y
Sbjct: 28 EANPHAVKVLKELLSGKQSSKKGM------LISIGEKGDKSVRKYSR----QIPDHKEGY 77
Query: 112 TLEIKNSSCLLTSQSIWGILRGLETFSQLPIPAPNGDQLIIRVQTIEDFP 161
L + +L G L+TF+QL +G + I+D+P
Sbjct: 78 YLSVNEKEIVLAGNDERGTYYALQTFAQL---LKDGK---LPEVEIKDYP 121
>d1m53a2 c.1.8.1 (A:43-520) Isomaltulose synthase PalI {Klebsiella
sp., lx3 [TaxId: 576]}
Length = 478
Score = 30.0 bits (66), Expect = 0.92
Identities = 13/119 (10%), Positives = 38/119 (31%), Gaps = 2/119 (1%)
Query: 223 FGPDAIY-TEKMIKNVIEYARLRGIRVIPEIDTPGHTDSMEPGMPQIHC-HCPHRVEGKT 280
Y T + +++ + R +R++ ++ +D + + P+R
Sbjct: 69 RQIMKEYGTMEDFDSLVAEMKKRNMRLMIDVVINHTSDQHPWFIQSKSDKNNPYRDYYFW 128
Query: 281 FVGPLDPTKNVTLDFVRDLFTELGQRFPESYVHLGGDEVDFFCWEQNPEIKAFMSTRQW 339
G + N F + + + Y+H + W+ + + ++
Sbjct: 129 RDGKDNQPPNNYPSFFGGSAWQKDAKSGQYYLHYFARQQPDLNWDNPKVREDLYAMLRF 187
>d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus
thermophilus [TaxId: 274]}
Length = 393
Score = 29.6 bits (65), Expect = 0.98
Identities = 17/169 (10%), Positives = 47/169 (27%), Gaps = 7/169 (4%)
Query: 229 YTEKMIKNVIEYARLRGIRVIPEIDTPGHTDSMEPGMPQIHCHCPHRVEGKTFVGPLDPT 288
+ I G++V+ T + P+I P EG+
Sbjct: 48 LEWGWLDEAIATLAAEGLKVVLGTPTATPPKWLVDRYPEIL---PVDREGRRRRFGGRRH 104
Query: 289 KNVTLDFVRDLFTELGQRFPESYVHLGGDEVDFFCWEQNPEIKAFMSTRQWDGPQLQSYY 348
+ R+ + E Y + V F + + + +
Sbjct: 105 YCFSSPVYREEARRIVTLLAERYGG--LEAVAGFQTDNEYGCHDTVRCYCPRCQEAFRGW 162
Query: 349 MQYLLKAIKTIRK--RSVVWEEVFQDWKNVNGDAQAMSMDKDTIVQVWR 395
++ I+ + + + W + ++ + V ++ + + +
Sbjct: 163 LEARYGTIEALNEAWGTAFWSQRYRSFAEVELPHLTVAEPNPSHLLDYY 211
>d1sbpa_ c.94.1.1 (A:) Sulphate-binding protein {Salmonella
typhimurium [TaxId: 90371]}
Length = 309
Score = 29.5 bits (65), Expect = 1.2
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 290 NVTLDFVRDLFTELGQRFPESYVHLGGDEVDF 321
NV+ D R+L+ + + F + GD V
Sbjct: 7 NVSYDPTRELYEQYNKAFSAHWKQETGDNVVI 38
>d2fiqa1 c.1.10.7 (A:1-420) Putative tagatose 6-phosphate kinase 1
GatZ {Escherichia coli [TaxId: 562]}
Length = 420
Score = 29.4 bits (66), Expect = 1.3
Identities = 12/45 (26%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Query: 294 DFVRDLFTELGQRFPESYVHLGGDEVDFFCWEQNPEIKAFMSTRQ 338
+FV + ++G F + LGGD + CW+Q A + +
Sbjct: 66 EFVFAIADKVG--FARERIILGGDHLGPNCWQQENVDAAMEKSVE 108
>d1uoka2 c.1.8.1 (A:1-479) Oligo-1,6, glucosidase {Bacillus cereus
[TaxId: 1396]}
Length = 479
Score = 29.2 bits (64), Expect = 1.5
Identities = 17/190 (8%), Positives = 52/190 (27%), Gaps = 11/190 (5%)
Query: 223 FGPDAIY-TEKMIKNVIEYARLRGIRVIPEIDTPGHTDSMEPGMPQIHCHCPHRVEGKTF 281
+ T + ++ R ++++ ++ +D + + +
Sbjct: 69 CKIMNEFGTMEDWDELLHEMHERNMKLMMDLVVNHTSDEHNWFIESRKSKDNKYRDYYIW 128
Query: 282 VGPLDPTKNVTLDFVRDLFTELGQRFPESYVHLGGDEVDFFCWEQNP-------EIKAFM 334
+ + + Y + N E+ F
Sbjct: 129 RPGKEGKEPNNWGAAFSGSAWQYDEMTDEYYLHLFSKKQPDLNWDNEKVRQDVYEMMKFW 188
Query: 335 STRQWDGPQLQSYYM---QYLLKAIKTIRKRSVVWEEVFQDWKNVNGDAQAMSMDKDTIV 391
+ DG ++ + L ++T + V + F + N++ M+ + +
Sbjct: 189 LEKGIDGFRMDVINFISKEEGLPTVETEEEGYVSGHKHFMNGPNIHKYLHEMNEEVLSHY 248
Query: 392 QVWRGGGLEG 401
+ G + G
Sbjct: 249 DIMTVGEMPG 258
>d2ihoa2 d.3.1.18 (A:156-293) Agglutinin MOA {Fairy-ring mushroom
(Marasmius oreades) [TaxId: 181124]}
Length = 138
Score = 28.0 bits (62), Expect = 1.9
Identities = 7/31 (22%), Positives = 14/31 (45%)
Query: 371 QDWKNVNGDAQAMSMDKDTIVQVWRGGGLEG 401
++ D + + + T Q+W+ GL G
Sbjct: 20 GTYRGYILDGEYLVLPNATFTQIWKDSGLPG 50
>d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]}
Length = 285
Score = 28.6 bits (63), Expect = 2.1
Identities = 11/52 (21%), Positives = 16/52 (30%), Gaps = 1/52 (1%)
Query: 209 YESKKFPSLSLKGAFGPDAIYTEKMIKNVIEYARLRGIRVIPEIDTPGHTDS 260
Y K+P + G G D I + R G +V + S
Sbjct: 3 YTQTKYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVY-VTEVSQLDTS 53
>d1xmta_ d.108.1.1 (A:) Hypothetical protein AT1g77540 {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 95
Score = 26.2 bits (58), Expect = 4.4
Identities = 5/20 (25%), Positives = 8/20 (40%)
Query: 231 EKMIKNVIEYARLRGIRVIP 250
+ E+A I +IP
Sbjct: 51 SHLCVAAFEHASSHSISIIP 70
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.136 0.419
Gapped
Lambda K H
0.267 0.0570 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,321,178
Number of extensions: 113199
Number of successful extensions: 314
Number of sequences better than 10.0: 1
Number of HSP's gapped: 286
Number of HSP's successfully gapped: 22
Length of query: 592
Length of database: 2,407,596
Length adjustment: 90
Effective length of query: 502
Effective length of database: 1,171,896
Effective search space: 588291792
Effective search space used: 588291792
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (25.7 bits)