Query psy13699
Match_columns 308
No_of_seqs 270 out of 2042
Neff 7.5
Searched_HMMs 46136
Date Fri Aug 16 18:13:00 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13699.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/13699hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0372|consensus 100.0 1.3E-89 2.7E-94 598.1 19.3 302 7-308 2-303 (303)
2 KOG0373|consensus 100.0 2.1E-79 4.5E-84 526.7 20.5 301 7-308 5-306 (306)
3 PTZ00239 serine/threonine prot 100.0 1.2E-75 2.7E-80 542.6 30.9 301 7-308 2-303 (303)
4 cd07415 MPP_PP2A_PP4_PP6 PP2A, 100.0 2.3E-75 4.9E-80 537.8 29.1 284 8-291 2-285 (285)
5 cd07420 MPP_RdgC Drosophila me 100.0 8.1E-75 1.8E-79 539.7 29.4 283 5-288 4-321 (321)
6 PTZ00480 serine/threonine-prot 100.0 1.2E-74 2.7E-79 537.8 29.7 297 7-304 10-315 (320)
7 PTZ00244 serine/threonine-prot 100.0 3.3E-73 7.2E-78 524.8 28.0 284 5-289 1-293 (294)
8 cd07414 MPP_PP1_PPKL PP1, PPKL 100.0 6.2E-73 1.3E-77 523.4 27.6 282 8-290 2-292 (293)
9 KOG0374|consensus 100.0 4.1E-73 9E-78 529.2 24.3 271 20-290 31-303 (331)
10 cd07416 MPP_PP2B PP2B, metallo 100.0 3.1E-72 6.7E-77 521.8 29.6 286 7-294 2-301 (305)
11 cd07417 MPP_PP5_C PP5, C-termi 100.0 3.3E-72 7.3E-77 522.8 29.5 287 6-293 14-307 (316)
12 smart00156 PP2Ac Protein phosp 100.0 8E-71 1.7E-75 505.3 27.8 269 21-290 1-270 (271)
13 KOG0371|consensus 100.0 1.1E-70 2.3E-75 482.3 15.9 301 7-308 19-319 (319)
14 cd07418 MPP_PP7 PP7, metalloph 100.0 6.3E-68 1.4E-72 500.5 29.9 286 6-291 10-367 (377)
15 cd07419 MPP_Bsu1_C Arabidopsis 100.0 7.9E-68 1.7E-72 494.0 28.2 271 19-289 19-311 (311)
16 KOG0375|consensus 100.0 1.6E-66 3.5E-71 473.5 14.0 286 7-294 47-346 (517)
17 KOG0377|consensus 100.0 4.3E-57 9.4E-62 420.3 12.6 285 6-291 119-433 (631)
18 KOG0376|consensus 100.0 3E-49 6.5E-54 374.9 15.7 285 8-293 170-461 (476)
19 cd00144 MPP_PPP_family phospho 100.0 4.3E-36 9.4E-41 267.5 21.0 214 51-275 1-224 (225)
20 PRK13625 bis(5'-nucleosyl)-tet 99.9 1.2E-26 2.7E-31 210.3 18.9 123 48-172 1-146 (245)
21 TIGR00668 apaH bis(5'-nucleosy 99.9 6.5E-27 1.4E-31 213.5 13.4 226 48-280 1-262 (279)
22 cd07422 MPP_ApaH Escherichia c 99.9 1.5E-26 3.3E-31 210.4 11.4 193 50-250 1-209 (257)
23 PRK00166 apaH diadenosine tetr 99.9 9.1E-26 2E-30 207.3 16.7 123 48-174 1-129 (275)
24 cd07425 MPP_Shelphs Shewanella 99.9 4E-26 8.8E-31 202.1 13.6 175 51-259 1-195 (208)
25 cd07413 MPP_PA3087 Pseudomonas 99.9 2.4E-25 5.2E-30 199.0 16.2 116 51-169 2-143 (222)
26 cd07423 MPP_PrpE Bacillus subt 99.9 4.3E-25 9.3E-30 198.9 17.5 123 48-172 1-143 (234)
27 cd07421 MPP_Rhilphs Rhilph pho 99.9 8.2E-25 1.8E-29 200.1 17.2 147 49-200 3-241 (304)
28 PHA02239 putative protein phos 99.9 2.6E-24 5.7E-29 193.6 14.3 137 48-200 1-183 (235)
29 PRK11439 pphA serine/threonine 99.9 9.2E-24 2E-28 188.3 15.3 116 48-169 17-146 (218)
30 cd07424 MPP_PrpA_PrpB PrpA and 99.9 7.8E-23 1.7E-27 180.8 18.1 168 48-245 1-182 (207)
31 PRK09968 serine/threonine-spec 99.9 4.6E-21 1E-25 170.9 15.3 116 48-169 15-144 (218)
32 PF00149 Metallophos: Calcineu 99.4 1.3E-12 2.7E-17 107.5 10.3 160 48-242 1-199 (200)
33 cd00841 MPP_YfcE Escherichia c 99.3 9.5E-11 2.1E-15 98.3 14.3 59 49-119 1-59 (155)
34 PF12850 Metallophos_2: Calcin 99.2 9.7E-11 2.1E-15 97.6 9.4 61 48-120 1-61 (156)
35 TIGR00040 yfcE phosphoesterase 99.2 6.4E-10 1.4E-14 93.9 14.2 62 48-118 1-63 (158)
36 PRK09453 phosphodiesterase; Pr 99.1 1.2E-10 2.6E-15 100.8 6.3 69 48-120 1-77 (182)
37 cd07397 MPP_DevT Myxococcus xa 99.1 1.4E-09 2.9E-14 98.0 12.0 155 49-241 2-206 (238)
38 cd07379 MPP_239FB Homo sapiens 99.0 1.3E-09 2.8E-14 89.7 9.7 118 49-247 1-120 (135)
39 COG0639 ApaH Diadenosine tetra 99.0 1.1E-09 2.5E-14 89.5 8.6 143 121-264 3-154 (155)
40 cd07394 MPP_Vps29 Homo sapiens 99.0 2.3E-08 4.9E-13 86.5 15.6 58 49-118 1-64 (178)
41 cd00838 MPP_superfamily metall 98.8 3.6E-08 7.7E-13 78.3 9.8 117 51-247 1-119 (131)
42 PRK05340 UDP-2,3-diacylglucosa 98.8 4.5E-08 9.7E-13 88.5 10.5 211 48-287 1-238 (241)
43 cd07388 MPP_Tt1561 Thermus the 98.8 1.1E-08 2.4E-13 91.5 6.4 72 47-119 4-75 (224)
44 cd07392 MPP_PAE1087 Pyrobaculu 98.8 2.7E-07 5.9E-12 79.1 14.2 65 50-120 1-66 (188)
45 cd07404 MPP_MS158 Microscilla 98.7 2.8E-08 6.2E-13 84.3 7.3 67 50-119 1-68 (166)
46 cd07399 MPP_YvnB Bacillus subt 98.6 1.8E-06 4E-11 76.7 16.4 192 49-289 2-213 (214)
47 TIGR01854 lipid_A_lpxH UDP-2,3 98.6 6.4E-08 1.4E-12 87.0 6.5 204 50-280 1-230 (231)
48 COG0622 Predicted phosphoester 98.6 2.9E-06 6.3E-11 72.9 14.8 160 48-291 2-167 (172)
49 cd07403 MPP_TTHA0053 Thermus t 98.6 8.1E-07 1.8E-11 72.7 10.8 107 51-247 1-107 (129)
50 cd07400 MPP_YydB Bacillus subt 98.4 3.7E-06 8E-11 69.4 12.0 116 50-246 1-128 (144)
51 cd07385 MPP_YkuE_C Bacillus su 98.4 4E-07 8.7E-12 80.6 5.4 70 48-119 2-76 (223)
52 PRK11340 phosphodiesterase Yae 98.4 6.5E-07 1.4E-11 82.4 6.1 70 48-119 50-125 (271)
53 cd07396 MPP_Nbla03831 Homo sap 98.3 1.3E-05 2.8E-10 73.5 13.3 72 49-120 2-87 (267)
54 PRK04036 DNA polymerase II sma 98.2 1E-05 2.2E-10 80.9 12.2 72 47-120 243-344 (504)
55 PRK11148 cyclic 3',5'-adenosin 98.2 0.00012 2.5E-09 67.5 16.8 71 47-119 14-98 (275)
56 COG2129 Predicted phosphoester 98.1 0.00037 8E-09 61.8 17.1 212 47-287 3-224 (226)
57 TIGR03729 acc_ester putative p 98.1 6.7E-06 1.4E-10 74.1 6.0 68 49-119 1-74 (239)
58 cd07395 MPP_CSTP1 Homo sapiens 98.0 0.00021 4.5E-09 65.1 15.6 69 49-119 6-99 (262)
59 TIGR00619 sbcd exonuclease Sbc 98.0 1E-05 2.3E-10 73.8 6.5 72 48-119 1-88 (253)
60 COG1409 Icc Predicted phosphoh 98.0 0.00021 4.5E-09 65.3 14.6 73 48-122 1-81 (301)
61 cd07390 MPP_AQ1575 Aquifex aeo 98.0 2E-05 4.3E-10 67.3 7.2 67 50-121 1-84 (168)
62 PHA02546 47 endonuclease subun 97.9 2.5E-05 5.5E-10 74.3 6.2 72 48-119 1-89 (340)
63 KOG0376|consensus 97.8 6.8E-06 1.5E-10 79.6 0.4 241 20-265 14-299 (476)
64 cd07402 MPP_GpdQ Enterobacter 97.7 9E-05 2E-09 66.2 6.9 67 49-119 1-83 (240)
65 cd00840 MPP_Mre11_N Mre11 nucl 97.7 7E-05 1.5E-09 65.9 5.8 72 49-121 1-91 (223)
66 cd07398 MPP_YbbF-LpxH Escheric 97.7 0.0001 2.2E-09 64.9 6.4 69 51-120 1-83 (217)
67 cd07401 MPP_TMEM62_N Homo sapi 97.6 0.00057 1.2E-08 62.4 11.1 70 50-119 2-89 (256)
68 cd08165 MPP_MPPE1 human MPPE1 97.6 0.0001 2.2E-09 62.3 5.3 48 72-119 36-89 (156)
69 cd00844 MPP_Dbr1_N Dbr1 RNA la 97.5 0.00018 3.8E-09 66.1 6.5 69 50-119 1-86 (262)
70 TIGR00024 SbcD_rel_arch putati 97.5 0.00022 4.7E-09 64.0 6.8 69 48-120 15-103 (225)
71 PF06874 FBPase_2: Firmicute f 97.5 0.00077 1.7E-08 67.7 11.0 44 73-121 183-226 (640)
72 COG2908 Uncharacterized protei 97.5 0.00026 5.6E-09 63.4 6.8 198 51-281 1-229 (237)
73 cd07383 MPP_Dcr2 Saccharomyces 97.5 0.00025 5.5E-09 61.9 6.5 70 48-117 3-87 (199)
74 cd07393 MPP_DR1119 Deinococcus 97.4 0.0003 6.6E-09 63.2 6.1 65 50-118 1-83 (232)
75 cd07391 MPP_PF1019 Pyrococcus 97.4 0.00034 7.5E-09 59.8 5.7 57 63-120 30-89 (172)
76 TIGR00583 mre11 DNA repair pro 97.4 0.0004 8.6E-09 67.6 6.7 54 47-100 3-68 (405)
77 PRK10966 exonuclease subunit S 97.3 0.0003 6.6E-09 68.5 5.8 72 48-120 1-88 (407)
78 cd07386 MPP_DNA_pol_II_small_a 97.3 0.00037 8.1E-09 62.9 5.1 67 51-119 2-94 (243)
79 cd00839 MPP_PAPs purple acid p 97.2 0.00025 5.5E-09 65.4 3.6 69 48-120 5-82 (294)
80 COG1408 Predicted phosphohydro 97.2 0.00049 1.1E-08 63.9 5.4 71 48-120 45-119 (284)
81 COG4186 Predicted phosphoester 97.1 0.0012 2.7E-08 55.3 5.8 66 50-119 6-86 (186)
82 cd08163 MPP_Cdc1 Saccharomyces 96.9 0.026 5.7E-07 51.6 13.6 32 217-250 202-233 (257)
83 cd07384 MPP_Cdc1_like Saccharo 96.9 0.0019 4.1E-08 55.4 5.6 50 70-119 41-100 (171)
84 cd08166 MPP_Cdc1_like_1 unchar 96.9 0.0019 4.1E-08 56.6 5.3 48 71-118 39-92 (195)
85 cd00845 MPP_UshA_N_like Escher 96.7 0.0021 4.6E-08 58.0 4.6 65 49-118 2-81 (252)
86 cd07380 MPP_CWF19_N Schizosacc 96.5 0.006 1.3E-07 51.3 6.0 66 51-117 1-68 (150)
87 PF14582 Metallophos_3: Metall 96.4 0.0018 3.9E-08 57.7 2.3 72 48-120 6-103 (255)
88 COG0420 SbcD DNA repair exonuc 96.3 0.0097 2.1E-07 57.5 6.7 73 48-120 1-89 (390)
89 cd08164 MPP_Ted1 Saccharomyces 96.1 0.012 2.6E-07 51.6 5.9 64 55-118 24-110 (193)
90 PLN02533 probable purple acid 96.1 0.0059 1.3E-07 59.9 4.2 71 47-120 139-212 (427)
91 cd07410 MPP_CpdB_N Escherichia 96.0 0.0069 1.5E-07 55.7 4.0 65 49-118 2-94 (277)
92 PF08321 PPP5: PPP5 TPR repeat 96.0 0.017 3.6E-07 44.8 5.4 41 6-46 55-95 (95)
93 cd07378 MPP_ACP5 Homo sapiens 95.5 0.026 5.7E-07 51.5 5.7 69 49-119 2-83 (277)
94 KOG3325|consensus 95.5 0.17 3.7E-06 42.2 9.8 120 50-254 3-128 (183)
95 cd07408 MPP_SA0022_N Staphyloc 94.9 0.033 7.3E-07 50.7 4.5 65 49-118 2-81 (257)
96 COG1407 Predicted ICC-like pho 94.2 0.12 2.6E-06 46.5 6.1 72 46-120 18-111 (235)
97 cd07387 MPP_PolD2_C PolD2 (DNA 94.2 1.5 3.3E-05 40.1 13.4 49 234-287 206-257 (257)
98 cd07412 MPP_YhcR_N Bacillus su 94.0 0.057 1.2E-06 50.1 3.8 65 49-118 2-87 (288)
99 cd07411 MPP_SoxB_N Thermus the 93.5 0.093 2E-06 47.9 4.3 64 50-119 3-95 (264)
100 cd00842 MPP_ASMase acid sphing 93.1 0.17 3.6E-06 46.9 5.3 73 49-121 39-124 (296)
101 cd07409 MPP_CD73_N CD73 ecto-5 92.9 0.2 4.3E-06 46.3 5.6 65 49-118 2-93 (281)
102 COG1768 Predicted phosphohydro 92.7 0.19 4.1E-06 43.4 4.6 45 73-121 42-88 (230)
103 PRK09419 bifunctional 2',3'-cy 92.5 0.13 2.7E-06 56.8 4.1 66 48-118 661-735 (1163)
104 KOG2863|consensus 92.2 0.16 3.4E-06 48.3 3.8 73 48-120 1-89 (456)
105 KOG3662|consensus 92.1 0.31 6.7E-06 47.3 5.8 47 72-118 91-143 (410)
106 COG1311 HYS2 Archaeal DNA poly 91.8 9.6 0.00021 37.8 15.6 203 49-288 227-471 (481)
107 cd07406 MPP_CG11883_N Drosophi 91.7 0.27 5.9E-06 44.7 4.8 56 58-118 21-82 (257)
108 KOG0918|consensus 90.8 0.023 5E-07 54.4 -3.2 195 75-279 48-250 (476)
109 TIGR00282 metallophosphoestera 90.7 0.43 9.3E-06 43.9 5.1 67 48-119 1-71 (266)
110 cd07405 MPP_UshA_N Escherichia 88.3 0.52 1.1E-05 43.7 3.7 66 49-119 2-87 (285)
111 COG3855 Fbp Uncharacterized pr 87.3 0.36 7.8E-06 47.3 2.1 43 74-121 190-232 (648)
112 cd07407 MPP_YHR202W_N Saccharo 87.2 0.63 1.4E-05 43.1 3.6 67 48-119 6-97 (282)
113 PF04042 DNA_pol_E_B: DNA poly 86.1 0.89 1.9E-05 39.7 3.8 72 50-121 1-93 (209)
114 KOG1432|consensus 86.0 0.92 2E-05 43.0 3.9 72 48-120 54-148 (379)
115 cd08162 MPP_PhoA_N Synechococc 85.8 1.1 2.4E-05 42.2 4.4 64 50-118 3-90 (313)
116 COG0737 UshA 5'-nucleotidase/2 85.2 0.87 1.9E-05 45.8 3.7 69 46-119 25-115 (517)
117 PRK09419 bifunctional 2',3'-cy 84.0 1.1 2.3E-05 49.7 4.0 67 47-118 41-138 (1163)
118 PRK09420 cpdB bifunctional 2', 83.6 1.2 2.5E-05 46.3 3.8 69 45-118 23-121 (649)
119 TIGR01390 CycNucDiestase 2',3' 83.3 1.2 2.5E-05 46.1 3.7 66 48-118 3-98 (626)
120 cd07382 MPP_DR1281 Deinococcus 82.7 3.1 6.7E-05 38.1 5.8 65 49-118 1-69 (255)
121 KOG2476|consensus 82.6 2.7 5.9E-05 41.3 5.6 69 47-116 5-75 (528)
122 PTZ00422 glideosome-associated 80.7 2 4.4E-05 41.7 4.1 70 47-118 26-108 (394)
123 KOG2310|consensus 80.1 3.4 7.4E-05 41.5 5.4 54 47-100 13-78 (646)
124 PRK11907 bifunctional 2',3'-cy 77.1 2.5 5.5E-05 44.9 3.8 67 47-118 115-212 (814)
125 PRK09558 ushA bifunctional UDP 76.0 3.3 7.1E-05 42.1 4.2 68 46-118 33-120 (551)
126 TIGR01530 nadN NAD pyrophospha 75.6 4.4 9.5E-05 41.2 5.0 51 63-118 37-93 (550)
127 KOG2679|consensus 70.3 2.7 5.8E-05 38.8 1.7 68 48-119 44-126 (336)
128 PTZ00235 DNA polymerase epsilo 66.8 13 0.00028 34.7 5.5 72 48-119 28-122 (291)
129 KOG3947|consensus 65.9 6.9 0.00015 36.1 3.5 63 48-120 62-127 (305)
130 PRK09418 bifunctional 2',3'-cy 63.1 7.5 0.00016 41.3 3.6 68 46-118 38-141 (780)
131 PF02609 Exonuc_VII_S: Exonucl 60.7 28 0.00061 23.6 5.0 36 3-39 3-38 (53)
132 PF13258 DUF4049: Domain of un 57.1 11 0.00024 34.1 3.1 88 76-171 86-187 (318)
133 PF06874 FBPase_2: Firmicute f 52.4 12 0.00025 38.5 2.8 67 218-286 506-582 (640)
134 KOG3339|consensus 51.0 1.4E+02 0.003 26.2 8.7 86 76-166 40-140 (211)
135 PRK14066 exodeoxyribonuclease 50.8 47 0.001 24.5 5.1 39 3-42 8-46 (75)
136 KOG1378|consensus 46.0 24 0.00052 34.9 3.8 34 221-254 322-355 (452)
137 PRK14069 exodeoxyribonuclease 44.1 64 0.0014 24.9 5.1 41 3-44 12-52 (95)
138 PRK00977 exodeoxyribonuclease 43.2 70 0.0015 23.8 5.1 40 3-43 14-53 (80)
139 PRK14068 exodeoxyribonuclease 42.8 74 0.0016 23.5 5.1 38 3-41 10-47 (76)
140 TIGR01280 xseB exodeoxyribonuc 42.8 77 0.0017 22.7 5.1 38 3-41 5-42 (67)
141 PF02875 Mur_ligase_C: Mur lig 42.7 51 0.0011 24.4 4.4 69 48-116 12-82 (91)
142 KOG2463|consensus 42.2 73 0.0016 30.3 6.1 80 214-299 207-298 (376)
143 PRK14070 exodeoxyribonuclease 40.9 71 0.0015 23.1 4.7 39 5-44 1-39 (69)
144 PRK14064 exodeoxyribonuclease 40.9 82 0.0018 23.1 5.1 38 3-41 10-47 (75)
145 PRK14063 exodeoxyribonuclease 38.7 92 0.002 22.9 5.1 40 3-43 9-48 (76)
146 PF12641 Flavodoxin_3: Flavodo 35.0 1.8E+02 0.004 24.4 7.1 58 51-111 2-72 (160)
147 cd07382 MPP_DR1281 Deinococcus 35.0 30 0.00066 31.6 2.5 39 77-118 1-39 (255)
148 PRK14067 exodeoxyribonuclease 33.7 1.2E+02 0.0027 22.5 5.1 39 4-43 12-50 (80)
149 TIGR00282 metallophosphoestera 33.3 44 0.00095 30.8 3.2 39 77-119 2-41 (266)
150 PF14164 YqzH: YqzH-like prote 29.1 1.4E+02 0.0029 21.4 4.4 35 8-42 6-47 (64)
151 COG3855 Fbp Uncharacterized pr 26.6 33 0.00072 34.1 1.2 42 219-260 514-565 (648)
152 cd01533 4RHOD_Repeat_2 Member 26.2 2.9E+02 0.0062 20.8 6.7 90 15-114 6-100 (109)
153 COG3958 Transketolase, C-termi 26.2 1.2E+02 0.0027 28.4 4.8 104 63-179 13-128 (312)
154 COG1692 Calcineurin-like phosp 24.5 98 0.0021 28.3 3.7 12 232-243 169-180 (266)
155 PF02671 PAH: Paired amphipath 22.8 80 0.0017 20.5 2.2 38 3-44 2-39 (47)
156 KOG3770|consensus 22.3 1.7E+02 0.0038 29.9 5.4 61 63-123 197-267 (577)
157 KOG3425|consensus 22.2 2.7E+02 0.0058 22.7 5.4 57 60-119 12-79 (128)
158 PRK10773 murF UDP-N-acetylmura 21.5 2.5E+02 0.0055 27.5 6.5 67 47-114 324-392 (453)
159 PF09949 DUF2183: Uncharacteri 21.4 2.7E+02 0.0059 21.5 5.3 42 62-112 54-95 (100)
160 smart00854 PGA_cap Bacterial c 21.2 1.5E+02 0.0033 26.3 4.4 37 225-263 199-235 (239)
161 COG4320 Uncharacterized protei 21.1 61 0.0013 30.8 1.8 62 35-103 44-108 (410)
No 1
>KOG0372|consensus
Probab=100.00 E-value=1.3e-89 Score=598.14 Aligned_cols=302 Identities=86% Similarity=1.477 Sum_probs=297.6
Q ss_pred HHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHhhCCCceeecCCcceeccCCCCHHHHHHHHHhcCCCCCCcEEeccCeec
Q psy13699 7 DLDRQIEQLKRCDPIKESEVKALCAKAREILVEESNVQRIDSPVTVCGDIHGQFYDLKELFKVGGDVPETNYLFMGDFVD 86 (308)
Q Consensus 7 ~~~~~i~~~~~~~~~~~~~~~~l~~~~~~il~~ep~l~~~~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~vD 86 (308)
++++.|+++++++.+++.++..||.++++||.+|||+..++.|++|+|||||+++||..+|+..|.++.++|+|||||||
T Consensus 2 dldr~ie~L~~~~li~E~eV~~LC~~~~eiL~~E~NV~~i~tPvtvcGDIHGQf~Dllelf~igG~~~~t~YLFLGDyVD 81 (303)
T KOG0372|consen 2 DLDRQIEQLRRCELIAESEVKALCAKVREILVEESNVQRIDTPVTVCGDIHGQFYDLLELFRIGGDVPETNYLFLGDYVD 81 (303)
T ss_pred cHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhcCCCceecCCCcEEeecccchHHHHHHHHHhCCCCCCCceEeecchhc
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHHHhhhhCCCcEEEECCCcchhhhHhhhCChHHHHHHhCCchhhhhhhHHhhccccceeEeCeEEEEcC
Q psy13699 87 RGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSITVWRYCTEIFDYLSLSAIIDGRIFCVHG 166 (308)
Q Consensus 87 rG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~LPl~~~i~~~~l~vHg 166 (308)
||..|+|++.+|+.||++||+++.+||||||++.++..|||++||.+|||+..+|+.+.+.|++||++|+|++++|||||
T Consensus 82 RG~~SvEt~lLLl~lK~rYP~ritLiRGNHEsRqitqvYGFY~EclrKYG~~~vWr~c~eiFdyL~l~aiid~kifCVHG 161 (303)
T KOG0372|consen 82 RGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSANVWRYCTEIFDYLSLAAIIDGKIFCVHG 161 (303)
T ss_pred cccchHHHHHHHHHHhhcCcceeEEeeccchhhhhhhhhhHHHHHHHHcCChHHHHHHHHHHHhhhHhheecCcEEEEcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCHHHHHhhcccCCCCCCCcccccccCCCCCCCCCccCCCCCeeEeChhHHHhhhhhcCceEEEeecccccCCc
Q psy13699 167 GLSPSIQTLDQIRTIDRKQEVPHDGPMCDLLWSDPEDTQGWGVSPRGAGYLFGSDVVASFNAANNIDMICRAHQLVMEGY 246 (308)
Q Consensus 167 Gi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdP~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~l~~iirgH~~~~~G~ 246 (308)
|+||++++++||+.+.|..++|+++..+|+|||||.+.++|..||||+|++||.+++.+|++.||+++|+|+||.+.+||
T Consensus 162 GlSP~i~~lDqIr~lDR~~Eiph~g~m~DllWSDPee~~g~~~SPRGaGylFG~dvv~~F~~~N~~~~I~RaHQLv~eGy 241 (303)
T KOG0372|consen 162 GLSPSIQTLDQIRVLDRKQEVPHDGAMCDLLWSDPEEGPGWGLSPRGAGYLFGEDVVESFLEANGLSLICRAHQLVMEGY 241 (303)
T ss_pred CCCcchhhHHHHHHhhccccCCCCCcchheeccCcccCCCcccCCCCccccccHHHHHHHHHhCChHHHHHHHHHHHhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeecCCeeEEEEeCCCCCccCCCcEEEEEEcCCCeeEEEEEecCCCCCCCCCCCCCCCCCCC
Q psy13699 247 KWHFNETVLTVWSAPNYCYRCGNVAAILELNENLQREFTIFEAAPQESRGIPSKKPQADYFL 308 (308)
Q Consensus 247 ~~~~~~~~iTifSa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (308)
++.|+++++|||||||||++|+|.||||.++++....|+.|++.|.+.++.+.+|++++||+
T Consensus 242 k~~F~~~v~TVWSAPNYCYrCGN~AsIl~lde~~~~~F~vFeaa~~~~~~~~~kk~~~~yFl 303 (303)
T KOG0372|consen 242 KWHFDEKVVTVWSAPNYCYRCGNVAAILELDEDLDKDFRVFEAAPQESRGIPAKKPIADYFL 303 (303)
T ss_pred HHhcCCceEEEecCCchhhhcCChHHheeeccccCcceEeeecchhhhcCCcccCcchhhcC
Confidence 99999999999999999999999999999999999999999999999998888899999996
No 2
>KOG0373|consensus
Probab=100.00 E-value=2.1e-79 Score=526.72 Aligned_cols=301 Identities=65% Similarity=1.244 Sum_probs=291.1
Q ss_pred HHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHhhCCCceeecCCcceeccCCCCHHHHHHHHHhcCCCCCCcEEeccCeec
Q psy13699 7 DLDRQIEQLKRCDPIKESEVKALCAKAREILVEESNVQRIDSPVTVCGDIHGQFYDLKELFKVGGDVPETNYLFMGDFVD 86 (308)
Q Consensus 7 ~~~~~i~~~~~~~~~~~~~~~~l~~~~~~il~~ep~l~~~~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~vD 86 (308)
+++++|+.++.++.++++++..||+.++++|..|.++..++.|+.|+|||||++.||.++|+..|..|+..|||+|||||
T Consensus 5 d~d~wi~~vk~ckyLpE~elk~LCe~v~d~L~eEsNvqPV~tPVTvCGDIHGQFyDL~eLFrtgG~vP~tnYiFmGDfVD 84 (306)
T KOG0373|consen 5 DLDQWIETVKKCKYLPENELKRLCEMVKDILMEESNVQPVSTPVTVCGDIHGQFYDLLELFRTGGQVPDTNYIFMGDFVD 84 (306)
T ss_pred CHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhhhcCccccCCCeeEeeccchhHHHHHHHHHhcCCCCCcceEEeccccc
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHHHhhhhCCCcEEEECCCcchhhhHhhhCChHHHHHHhCCchhhhhhhHHhhccccceeEeCeEEEEcC
Q psy13699 87 RGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSITVWRYCTEIFDYLSLSAIIDGRIFCVHG 166 (308)
Q Consensus 87 rG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~LPl~~~i~~~~l~vHg 166 (308)
||..|+|++.+|+.||.+||.++.+||||||.+.+...|||++||..|||+...|+.+.++|+.|+++|+|+++++||||
T Consensus 85 RGyySLEtfT~l~~LkaryP~~ITLlRGNHEsRqitqVYGFydECq~KYGnan~wkycckVFD~LtlaAiID~~vLCVHG 164 (306)
T KOG0373|consen 85 RGYYSLETFTLLLLLKARYPAKITLLRGNHESRQITQVYGFYDECQNKYGNANVWKYCCKVFDFLTLAAIIDEKVLCVHG 164 (306)
T ss_pred cccccHHHHHHHHHHhhcCCceeEEeeccchhhhhhhhhhhHHHHHhhcCCchHHHHHHHHHhhhhHHHHhcCcEEEEcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCHHHHHhhcccCCCCCCCcccccccCCCCCCCCCccCCCCCeeEeChhHHHhhhhhcCceEEEeecccccCCc
Q psy13699 167 GLSPSIQTLDQIRTIDRKQEVPHDGPMCDLLWSDPEDTQGWGVSPRGAGYLFGSDVVASFNAANNIDMICRAHQLVMEGY 246 (308)
Q Consensus 167 Gi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdP~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~l~~iirgH~~~~~G~ 246 (308)
|+||++.+++||+-|.|..++|+++.++|++||||++.+.|..++||+|.+||++++.+|...|++++|.|+||.+.+||
T Consensus 165 GLSPdirtlDqir~i~R~qEiPh~G~fcDlmWSDPedve~W~vSpRGAGwlFGskVt~eF~~iN~L~LicRaHQLV~EG~ 244 (306)
T KOG0373|consen 165 GLSPDIRTLDQIRLIERNQEIPHEGPFCDLMWSDPEDVETWAVSPRGAGWLFGSKVTTEFNHINNLNLICRAHQLVQEGF 244 (306)
T ss_pred CCCccceeHHHHHhHHhhccCCCCCCccceeccChhhhhhheeCCCCcceeechhhhHHHHhccchHHHHhHHHHHHhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeecCCe-eEEEEeCCCCCccCCCcEEEEEEcCCCeeEEEEEecCCCCCCCCCCCCCCCCCCC
Q psy13699 247 KWHFNET-VLTVWSAPNYCYRCGNVAAILELNENLQREFTIFEAAPQESRGIPSKKPQADYFL 308 (308)
Q Consensus 247 ~~~~~~~-~iTifSa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (308)
+++|++| ++|||||||||.+|+|.|+||.++++++.+++.|.+.|..+|- .-++..++|||
T Consensus 245 KymF~eK~lvTVWSAPNYCYRCGNvAsi~~~d~~~~r~~k~F~avpd~~~~-~p~r~~~pYFl 306 (306)
T KOG0373|consen 245 KYMFDEKGLVTVWSAPNYCYRCGNVASIMSFDDNLERETKIFSAVPDNSRV-IPPRTRAPYFL 306 (306)
T ss_pred HhccCCCCEEEEecCCchhhhccCeeeEEEecccCCccceeeeecCCcccc-CCCCCCCCCcC
Confidence 9999888 9999999999999999999999999999999999999877654 33344567775
No 3
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=100.00 E-value=1.2e-75 Score=542.63 Aligned_cols=301 Identities=60% Similarity=1.140 Sum_probs=282.1
Q ss_pred HHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHhhCCCceeecCCcceeccCCCCHHHHHHHHHhcCCCCCCcEEeccCeec
Q psy13699 7 DLDRQIEQLKRCDPIKESEVKALCAKAREILVEESNVQRIDSPVTVCGDIHGQFYDLKELFKVGGDVPETNYLFMGDFVD 86 (308)
Q Consensus 7 ~~~~~i~~~~~~~~~~~~~~~~l~~~~~~il~~ep~l~~~~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~vD 86 (308)
+++++|+.+.+...++++++.+||++|+++|++||++++++.+++|||||||++.+|.++++..+.++.++|+|||||||
T Consensus 2 ~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVD 81 (303)
T PTZ00239 2 DIDRHIATLLNGGCLPERDLKLICERAKEIFLEESNVQPVRAPVNVCGDIHGQFYDLQALFKEGGDIPNANYIFIGDFVD 81 (303)
T ss_pred CHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCCeEecCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceEEEeeeEcC
Confidence 47889999999999999999999999999999999999999999999999999999999999998888999999999999
Q ss_pred CCCCcHHHHHHHHHhhhhCCCcEEEECCCcchhhhHhhhCChHHHHHHhCCchhhhhhhHHhhccccceeEeCeEEEEcC
Q psy13699 87 RGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSITVWRYCTEIFDYLSLSAIIDGRIFCVHG 166 (308)
Q Consensus 87 rG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~LPl~~~i~~~~l~vHg 166 (308)
||++|+|++.+++++|..+|.++++||||||.+.++..|||..|+..+|+...+|+.+.++|++||++++++++++||||
T Consensus 82 RG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~ky~~~~~~~~~~~~f~~LPlaaii~~~i~cvHg 161 (303)
T PTZ00239 82 RGYNSVETMEYLLCLKVKYPGNITLLRGNHESRQCTQVYGFYEEILRKYGNSNPWRLFMDVFDCLPLAALIEGQILCVHG 161 (303)
T ss_pred CCCCHHHHHHHHHHhhhcCCCcEEEEecccchHHHhhhcChHHHHHHHhcChhHHHHHHHHHHhCchheEEcCeEEEEcC
Confidence 99999999999999999999999999999999999999999999999998778999999999999999999999999999
Q ss_pred CCCCCCCCHHHHHhhcccCCCCCCCcccccccCCCCCCCCCccCCCCCeeEeChhHHHhhhhhcCceEEEeecccccCCc
Q psy13699 167 GLSPSIQTLDQIRTIDRKQEVPHDGPMCDLLWSDPEDTQGWGVSPRGAGYLFGSDVVASFNAANNIDMICRAHQLVMEGY 246 (308)
Q Consensus 167 Gi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdP~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~l~~iirgH~~~~~G~ 246 (308)
|++|.+.+++++++++|+.+.|.++.+.|++||||.+..+|.+++||.|++||++++++||++|++++||||||++++||
T Consensus 162 Gi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~ 241 (303)
T PTZ00239 162 GLSPDMRTIDQIRTIDRKIEIPHEGPFCDLMWSDPEEVEYWAVNSRGAGYLFGAKVTKEFCRLNDLTLICRAHQLVMEGY 241 (303)
T ss_pred ccCcccccHhhhccccCCCCCCCCCCceeeEecCccccCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcChhhccce
Confidence 99999999999999999999999999999999999988899999999999999999999999999999999999999999
Q ss_pred eeecCC-eeEEEEeCCCCCccCCCcEEEEEEcCCCeeEEEEEecCCCCCCCCCCCCCCCCCCC
Q psy13699 247 KWHFNE-TVLTVWSAPNYCYRCGNVAAILELNENLQREFTIFEAAPQESRGIPSKKPQADYFL 308 (308)
Q Consensus 247 ~~~~~~-~~iTifSa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (308)
++++++ +|+||||||+||+..+|+||+|.++++.+++|++|++.+.+.+..+..++ +.||+
T Consensus 242 ~~~~~~~~~iTvfSa~~Y~~~~~N~~ail~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 303 (303)
T PTZ00239 242 KYWFPDQNLVTVWSAPNYCYRCGNIASILCLDENLQQTWKTFKEVPESAKSINPKNV-LPYFL 303 (303)
T ss_pred EEEeCCCeEEEEECCCcccCCCCceEEEEEECCCCcEeeEEeeCCCcccccCcccCC-CCCCC
Confidence 987755 59999999999999999999999999999999999999876433233332 35653
No 4
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=100.00 E-value=2.3e-75 Score=537.76 Aligned_cols=284 Identities=77% Similarity=1.419 Sum_probs=275.8
Q ss_pred HHHHHHHHhhCCCCCHHHHHHHHHHHHHHHhhCCCceeecCCcceeccCCCCHHHHHHHHHhcCCCCCCcEEeccCeecC
Q psy13699 8 LDRQIEQLKRCDPIKESEVKALCAKAREILVEESNVQRIDSPVTVCGDIHGQFYDLKELFKVGGDVPETNYLFMGDFVDR 87 (308)
Q Consensus 8 ~~~~i~~~~~~~~~~~~~~~~l~~~~~~il~~ep~l~~~~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~vDr 87 (308)
++++|+++.+...++.+++.+||++|+++|++||++++++.+++|||||||++.+|.++|+..+.++.++||||||||||
T Consensus 2 ~~~~~~~~~~~~~l~~~~~~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~dL~~ll~~~~~~~~~~~lfLGDyVDR 81 (285)
T cd07415 2 LDKWIEQLKKCELLPESEVKSLCEKAKEILVKESNVQRVRSPVTVCGDIHGQFYDLLELFRVGGDPPDTNYLFLGDYVDR 81 (285)
T ss_pred HHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCCEEecCCCEEEEEeCCCCHHHHHHHHHHcCCCCCCeEEEEeEECCC
Confidence 68899999999999999999999999999999999999999999999999999999999999998889999999999999
Q ss_pred CCCcHHHHHHHHHhhhhCCCcEEEECCCcchhhhHhhhCChHHHHHHhCCchhhhhhhHHhhccccceeEeCeEEEEcCC
Q psy13699 88 GFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSITVWRYCTEIFDYLSLSAIIDGRIFCVHGG 167 (308)
Q Consensus 88 G~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~LPl~~~i~~~~l~vHgG 167 (308)
|++|+|++.+++++|..+|.++++||||||...++..|||..|+..+|+...+|+.+.++|++||++++++++++|||||
T Consensus 82 G~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~ygf~~e~~~~y~~~~l~~~~~~~f~~lPlaaii~~~i~cvHgG 161 (285)
T cd07415 82 GYYSVETFLLLLALKVRYPDRITLLRGNHESRQITQVYGFYDECLRKYGNANVWKYCTDLFDYLPLAALIDNQIFCVHGG 161 (285)
T ss_pred CcCHHHHHHHHHHHhhcCCCcEEEEecccchHhhhhhcchhHHHHHhcCchHHHHHHHHHHHHhHHHhEeCCeEEEEcCC
Confidence 99999999999999999999999999999999999999999999999987789999999999999999999999999999
Q ss_pred CCCCCCCHHHHHhhcccCCCCCCCcccccccCCCCCCCCCccCCCCCeeEeChhHHHhhhhhcCceEEEeecccccCCce
Q psy13699 168 LSPSIQTLDQIRTIDRKQEVPHDGPMCDLLWSDPEDTQGWGVSPRGAGYLFGSDVVASFNAANNIDMICRAHQLVMEGYK 247 (308)
Q Consensus 168 i~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdP~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~l~~iirgH~~~~~G~~ 247 (308)
++|.+.+++++++++|+.+.|.++.+.|++||||.+..+|.+++||.|++||++++++||++|++++||||||++++||+
T Consensus 162 i~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~ 241 (285)
T cd07415 162 LSPSIDTLDQIRAIDRFQEVPHEGPMCDLLWSDPDDIEGWGISPRGAGYLFGQDVVEEFNHNNGLTLICRAHQLVMEGYQ 241 (285)
T ss_pred CCCCcccHHHhhcccCCCCCCCCCCccceEecCCCccCCCCcCCCCCccccCHHHHHHHHHHCCCeEEEEcCccccceEE
Confidence 99999999999999999999999999999999999888999999999999999999999999999999999999999999
Q ss_pred eecCCeeEEEEeCCCCCccCCCcEEEEEEcCCCeeEEEEEecCC
Q psy13699 248 WHFNETVLTVWSAPNYCYRCGNVAAILELNENLQREFTIFEAAP 291 (308)
Q Consensus 248 ~~~~~~~iTifSa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~~ 291 (308)
+.++++|+||||||+||+..+|+||+|.|+++++++|++|+|.|
T Consensus 242 ~~~~~~~~TvfSa~~y~~~~~n~~a~l~i~~~~~~~~~~~~~~~ 285 (285)
T cd07415 242 WMFDDKLVTVWSAPNYCYRCGNVASIMELDEHLKRSFKVFEAAP 285 (285)
T ss_pred EecCCcEEEEecCCcccCCCCceEEEEEECCCCcEeEEEeccCC
Confidence 99999999999999999999999999999999999999999864
No 5
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=100.00 E-value=8.1e-75 Score=539.69 Aligned_cols=283 Identities=35% Similarity=0.628 Sum_probs=261.2
Q ss_pred HHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHhhCCCceeecC----CcceeccCCCCHHHHHHHHHhcCCCC-CCcEE
Q psy13699 5 IQDLDRQIEQLKRCDPIKESEVKALCAKAREILVEESNVQRIDS----PVTVCGDIHGQFYDLKELFKVGGDVP-ETNYL 79 (308)
Q Consensus 5 ~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~il~~ep~l~~~~~----~i~viGDIHG~~~~L~~ll~~~~~~~-~~~~v 79 (308)
.+.++.+|+++.+.+.++++++.+||++|+++|++||++++++. |++|||||||++++|.++|+..+.++ .++||
T Consensus 4 ~~~~~~~i~~~~~~~~l~~~~i~~L~~~a~~il~~ep~vl~i~~~~~~~~~vvGDiHG~~~dL~~il~~~g~~~~~~~~l 83 (321)
T cd07420 4 KDHIDALIEAFKEKQLLHAKYVLLILREARKVLKQLPNISRVSTSISKQVTICGDLHGKLDDLFLIFYKNGLPSPENPYV 83 (321)
T ss_pred HHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCeEEEEeCCCCHHHHHHHHHHcCCCCccceEE
Confidence 46799999999999999999999999999999999999999976 89999999999999999999988764 57899
Q ss_pred eccCeecCCCCcHHHHHHHHHhhhhCCCcEEEECCCcchhhhHhhhCChHHHHHHhCC--chhhhhhhHHhhccccceeE
Q psy13699 80 FMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGS--ITVWRYCTEIFDYLSLSAII 157 (308)
Q Consensus 80 fLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~--~~~~~~~~~~~~~LPl~~~i 157 (308)
|||||||||++|+||+.+|++||+.+|+++++||||||.+.++..|||..|+..+|+. ..+|+.+.++|++||+++++
T Consensus 84 FLGDyVDRG~~s~Evl~ll~~lk~~~p~~v~llRGNHE~~~~~~~yGf~~e~~~~y~~~~~~l~~~~~~~F~~LPlaaii 163 (321)
T cd07420 84 FNGDFVDRGKRSIEILIILFAFFLVYPNEVHLNRGNHEDHIMNLRYGFTKEVMSKYKLHGKKILRLLEDVFSWLPLATII 163 (321)
T ss_pred EeccccCCCCCcHHHHHHHHHHhhcCCCcEEEecCchhhhhhhhhcChHHHHHHHhCccHHHHHHHHHHHHHhCCceEEE
Confidence 9999999999999999999999999999999999999999999999999999999974 68999999999999999999
Q ss_pred eCeEEEEcCCCCCCCCCHHHHHhhcccCC-----CCC----------------------CCcccccccCCCCCCCC-Ccc
Q psy13699 158 DGRIFCVHGGLSPSIQTLDQIRTIDRKQE-----VPH----------------------DGPMCDLLWSDPEDTQG-WGV 209 (308)
Q Consensus 158 ~~~~l~vHgGi~p~~~~~~~i~~i~r~~~-----~~~----------------------~~~~~dllWsdP~~~~~-~~~ 209 (308)
++++|||||||+| ..++++|++|+|+.. .|. .+.+.|+|||||.+..+ |.+
T Consensus 164 ~~~i~cvHGGi~~-~~~l~~i~~i~r~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlLWSDP~~~~~~~~~ 242 (321)
T cd07420 164 DNKILVVHGGISD-STDLDLLDKIDRHKYVSVLRPPLRKGMEELTGEEEDPSEPLDKTEWRQILDILWSDPKAQKGCKPN 242 (321)
T ss_pred cCCEEEEeCCCCC-ccCHHHHHhhhccccccccCCCccccccccccccccccccccccccchhheeeecCCccCCCCCcc
Confidence 9999999999997 578999999988421 111 13578999999987544 777
Q ss_pred CCCCCeeEeChhHHHhhhhhcCceEEEeecccccCCceeecCCeeEEEEeCCCCCccCCCcEEEEEEcCCCeeEEEEEe
Q psy13699 210 SPRGAGYLFGSDVVASFNAANNIDMICRAHQLVMEGYKWHFNETVLTVWSAPNYCYRCGNVAAILELNENLQREFTIFE 288 (308)
Q Consensus 210 ~~rg~g~~fg~~~~~~fl~~~~l~~iirgH~~~~~G~~~~~~~~~iTifSa~~y~~~~~n~~avl~i~~~~~~~~~~~~ 288 (308)
++||.|++||++++.+||++|++++||||||++++||++.++++|+||||||+||+..+|+||+|.++++.+++|++|+
T Consensus 243 ~~RG~g~~FG~~~~~~Fl~~n~l~~IIR~He~v~~G~~~~~~~~~iTvFSa~nY~~~~~N~gavl~i~~~~~~~f~~~~ 321 (321)
T cd07420 243 TFRGGGCYFGPDVTSKVLQKHGLSLLIRSHECKPEGYEFCHNNKVITIFSASNYYEEGSNRGAYIKLGPDLTPHFVQYQ 321 (321)
T ss_pred CCCCCccccCHHHHHHHHHHCCCcEEEEcChhhhcceEEecCCeEEEEecCCccCCCCCccEEEEEECCCCceeEEEeC
Confidence 7899999999999999999999999999999999999999999999999999999999999999999999999999884
No 6
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=100.00 E-value=1.2e-74 Score=537.77 Aligned_cols=297 Identities=45% Similarity=0.924 Sum_probs=280.2
Q ss_pred HHHHHHHHHhhCC--------CCCHHHHHHHHHHHHHHHhhCCCceeecCCcceeccCCCCHHHHHHHHHhcCCCCCCcE
Q psy13699 7 DLDRQIEQLKRCD--------PIKESEVKALCAKAREILVEESNVQRIDSPVTVCGDIHGQFYDLKELFKVGGDVPETNY 78 (308)
Q Consensus 7 ~~~~~i~~~~~~~--------~~~~~~~~~l~~~~~~il~~ep~l~~~~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~ 78 (308)
+++++|+++.+.. .++++++.+||++|+++|++||++++++.+++|||||||++.+|.++|+..+.++.++|
T Consensus 10 ~~~~~i~~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~ep~ll~i~~~i~vvGDIHG~~~dL~~l~~~~g~~~~~~y 89 (320)
T PTZ00480 10 DVDNIIERLLSVRGSKPGKNVNLTEAEVRGLCIKARDIFISQPILLELEAPLKICGDVHGQYFDLLRLFEYGGYPPESNY 89 (320)
T ss_pred CHHHHHHHHHhccccCccccCCCCHHHHHHHHHHHHHHHHhCCceEecCCCeEEEeecccCHHHHHHHHHhcCCCCcceE
Confidence 4888888888654 58999999999999999999999999999999999999999999999999999999999
Q ss_pred EeccCeecCCCCcHHHHHHHHHhhhhCCCcEEEECCCcchhhhHhhhCChHHHHHHhCCchhhhhhhHHhhccccceeEe
Q psy13699 79 LFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSITVWRYCTEIFDYLSLSAIID 158 (308)
Q Consensus 79 vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~LPl~~~i~ 158 (308)
||||||||||++|+|++.+++++|+.+|.++++||||||...++..|||..|+..+|+ ..+|..+.++|++||++|+++
T Consensus 90 lfLGDyVDRG~~s~evl~ll~~lki~~p~~v~llRGNHE~~~~~~~ygF~~e~~~~y~-~~l~~~~~~~F~~LPlaAiI~ 168 (320)
T PTZ00480 90 LFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYT-IKLWKTFTDCFNCLPVAALID 168 (320)
T ss_pred EEeceecCCCCCcHHHHHHHHHhcccCCCceEEEecccchhhhhhhcchHHHHHhhcC-HHHHHHHHHHHHhccHhheec
Confidence 9999999999999999999999999999999999999999999999999999999994 689999999999999999999
Q ss_pred CeEEEEcCCCCCCCCCHHHHHhhcccCCCCCCCcccccccCCCCC-CCCCccCCCCCeeEeChhHHHhhhhhcCceEEEe
Q psy13699 159 GRIFCVHGGLSPSIQTLDQIRTIDRKQEVPHDGPMCDLLWSDPED-TQGWGVSPRGAGYLFGSDVVASFNAANNIDMICR 237 (308)
Q Consensus 159 ~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdP~~-~~~~~~~~rg~g~~fg~~~~~~fl~~~~l~~iir 237 (308)
+++|||||||+|.+.++++++.++||.+.|.++.+.|+|||||.+ ..+|.+++||.|++||++++.+||++|++++|||
T Consensus 169 ~~i~cvHGGI~p~~~~l~~i~~i~rp~~~~~~~~~~dllWSDP~~~~~~~~~s~RG~g~~FG~~~~~~Fl~~n~l~~IiR 248 (320)
T PTZ00480 169 EKILCMHGGLSPELSNLEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWADNERGVSYVFSQEIVQVFLKKHELDLICR 248 (320)
T ss_pred CcEEEEcCCcCcccCCHHHHhcccCCCCCCccchhhheeecCcccccCCCccCCCCCccccCHHHHHHHHHhCCCcEEEE
Confidence 999999999999999999999999999999999999999999986 6789999999999999999999999999999999
Q ss_pred ecccccCCceeecCCeeEEEEeCCCCCccCCCcEEEEEEcCCCeeEEEEEecCCCCCCCCCCCCCCC
Q psy13699 238 AHQLVMEGYKWHFNETVLTVWSAPNYCYRCGNVAAILELNENLQREFTIFEAAPQESRGIPSKKPQA 304 (308)
Q Consensus 238 gH~~~~~G~~~~~~~~~iTifSa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (308)
|||++++||++.++++|+||||||+||+..+|+||+|.|++++.++|++|+|.+.+.-..+..|+-.
T Consensus 249 ~Hq~v~~G~~~~~~~~~iTvFSa~~Y~~~~~N~ga~l~i~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 315 (320)
T PTZ00480 249 AHQVVEDGYEFFSKRQLVTLFSAPNYCGEFDNAGSMMTIDESLMCSFQILKPAEQGQGASQQNKPGS 315 (320)
T ss_pred cCccccCceEEeCCCcEEEEeCCcccCCCCCccEEEEEECCCCcEeEEEecCCcccccccccccCCC
Confidence 9999999999999999999999999999999999999999999999999998876655555555533
No 7
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=100.00 E-value=3.3e-73 Score=524.78 Aligned_cols=284 Identities=41% Similarity=0.818 Sum_probs=270.1
Q ss_pred HHHHHHHHHHHhhCC--------CCCHHHHHHHHHHHHHHHhhCCCceeecCCcceeccCCCCHHHHHHHHHhcCCCCCC
Q psy13699 5 IQDLDRQIEQLKRCD--------PIKESEVKALCAKAREILVEESNVQRIDSPVTVCGDIHGQFYDLKELFKVGGDVPET 76 (308)
Q Consensus 5 ~~~~~~~i~~~~~~~--------~~~~~~~~~l~~~~~~il~~ep~l~~~~~~i~viGDIHG~~~~L~~ll~~~~~~~~~ 76 (308)
|+.++.+|+++.+.. .++.+++.+||++|+++|++||++++++.|++|||||||++.+|.++|+..+.++.+
T Consensus 1 ~~~~~~~i~~~~~~~~~~~~~~~~i~~~~i~~l~~~~~~il~~e~~ll~i~~p~~ViGDIHG~~~~L~~l~~~~~~~~~~ 80 (294)
T PTZ00244 1 MSLVQTLIEKMLTVKGNRTQRQILIREEDIRAVLTEVREIFMSQPMLLEIRPPVRVCGDTHGQYYDLLRIFEKCGFPPYS 80 (294)
T ss_pred CchHHHHHHHHHhcccCCCccccCCCHHHHHHHHHHHHHHHHhCCCeEeccCCceeeccCCCCHHHHHHHHHHcCCCCcc
Confidence 566778888877543 588999999999999999999999999999999999999999999999999988888
Q ss_pred cEEeccCeecCCCCcHHHHHHHHHhhhhCCCcEEEECCCcchhhhHhhhCChHHHHHHhCCchhhhhhhHHhhcccccee
Q psy13699 77 NYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSITVWRYCTEIFDYLSLSAI 156 (308)
Q Consensus 77 ~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~LPl~~~ 156 (308)
+++|||||||||++|+||+.+++++|..+|.++++||||||.+.++..|||..++..+|+ ..+|+.+.++|++||++++
T Consensus 81 ~~lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~y~-~~l~~~~~~~f~~lPlaai 159 (294)
T PTZ00244 81 NYLFLGDYVDRGKHSVETITLQFCYKIVYPENFFLLRGNHECASINKMYGFFDDVKRRYN-IKLFKAFTDVFNTMPVCCV 159 (294)
T ss_pred cEEEeeeEecCCCCHHHHHHHHHHHhhccCCeEEEEecccchHhHhhccChHHHHHHHhh-HHHHHHHHHHHHhCchheE
Confidence 999999999999999999999999999999999999999999999999999999999995 6799999999999999999
Q ss_pred EeCeEEEEcCCCCCCCCCHHHHHhhcccCCCCCCCcccccccCCCCC-CCCCccCCCCCeeEeChhHHHhhhhhcCceEE
Q psy13699 157 IDGRIFCVHGGLSPSIQTLDQIRTIDRKQEVPHDGPMCDLLWSDPED-TQGWGVSPRGAGYLFGSDVVASFNAANNIDMI 235 (308)
Q Consensus 157 i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdP~~-~~~~~~~~rg~g~~fg~~~~~~fl~~~~l~~i 235 (308)
++++++|||||++|.+.+++++++++||.+.|.++.+.|++||||.+ ..+|.+++||.|++||++++++||++|++++|
T Consensus 160 i~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~i 239 (294)
T PTZ00244 160 ISEKIICMHGGLSPDLTSLASVNEIERPCDVPDRGILCDLLWADPEDEVRGFLESDRGVSYLFGEDIVNDFLDMVDMDLI 239 (294)
T ss_pred ecCeeEEEcCCCCchhhHHHHhhhhccccCCCccchhheeeecCcccccCCCCcCCCCCccccCHHHHHHHHHHcCCcEE
Confidence 99999999999999999999999999999999999999999999986 67999999999999999999999999999999
Q ss_pred EeecccccCCceeecCCeeEEEEeCCCCCccCCCcEEEEEEcCCCeeEEEEEec
Q psy13699 236 CRAHQLVMEGYKWHFNETVLTVWSAPNYCYRCGNVAAILELNENLQREFTIFEA 289 (308)
Q Consensus 236 irgH~~~~~G~~~~~~~~~iTifSa~~y~~~~~n~~avl~i~~~~~~~~~~~~~ 289 (308)
|||||++++||++.++++++||||||+||+..+|+||+|.|+++.+++|++|.+
T Consensus 240 iR~Hq~~~~G~~~~~~~~~iTvfSa~~Y~~~~~N~~a~l~i~~~~~~~f~~~~~ 293 (294)
T PTZ00244 240 VRAHQVMERGYGFFASRQLVTVFSAPNYCGEFDNDAAVMNIDDKLQCSFLIIPA 293 (294)
T ss_pred EEcCccccCceEEcCCCeEEEEeCCccccCCCCceEEEEEECCCCcEeEEEeec
Confidence 999999999999999999999999999999999999999999999999998864
No 8
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=100.00 E-value=6.2e-73 Score=523.42 Aligned_cols=282 Identities=49% Similarity=0.988 Sum_probs=268.9
Q ss_pred HHHHHHHHhhCC--------CCCHHHHHHHHHHHHHHHhhCCCceeecCCcceeccCCCCHHHHHHHHHhcCCCCCCcEE
Q psy13699 8 LDRQIEQLKRCD--------PIKESEVKALCAKAREILVEESNVQRIDSPVTVCGDIHGQFYDLKELFKVGGDVPETNYL 79 (308)
Q Consensus 8 ~~~~i~~~~~~~--------~~~~~~~~~l~~~~~~il~~ep~l~~~~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~v 79 (308)
++++|+++.+.. .++++++.+||++|+++|++||++++++.+++||||||||+.+|.++|+..+.++.++||
T Consensus 2 ~~~~i~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~il~~ep~~l~i~~~i~viGDIHG~~~~L~~l~~~~~~~~~~~~l 81 (293)
T cd07414 2 IDSIIERLLEVRGSRPGKNVQLTEAEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYL 81 (293)
T ss_pred HHHHHHHHHhccccCCcccCCCCHHHHHHHHHHHHHHHHhCCCeEecCCceEEEEecCCCHHHHHHHHHhcCCCCcceEE
Confidence 567777777654 689999999999999999999999999999999999999999999999999998999999
Q ss_pred eccCeecCCCCcHHHHHHHHHhhhhCCCcEEEECCCcchhhhHhhhCChHHHHHHhCCchhhhhhhHHhhccccceeEeC
Q psy13699 80 FMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSITVWRYCTEIFDYLSLSAIIDG 159 (308)
Q Consensus 80 fLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~LPl~~~i~~ 159 (308)
|||||||||++|+|++.+++++|+.+|.++++||||||.+.++..+||..|+..+|+ ..+|..+.++|++||+++++++
T Consensus 82 fLGDyVDRG~~s~e~i~ll~~lk~~~p~~i~llrGNHE~~~~~~~~gf~~e~~~~y~-~~l~~~~~~~f~~lPlaa~i~~ 160 (293)
T cd07414 82 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYN-IKLWKTFTDCFNCLPVAAIIDE 160 (293)
T ss_pred EEeeEecCCCCcHHHHHHHHHhhhhCCCcEEEEecccchhhHhhhcchhhHHHHhhh-HHHHHHHHHHHHHhHHHHhhCC
Confidence 999999999999999999999999999999999999999999999999999999994 6799999999999999999999
Q ss_pred eEEEEcCCCCCCCCCHHHHHhhcccCCCCCCCcccccccCCCCC-CCCCccCCCCCeeEeChhHHHhhhhhcCceEEEee
Q psy13699 160 RIFCVHGGLSPSIQTLDQIRTIDRKQEVPHDGPMCDLLWSDPED-TQGWGVSPRGAGYLFGSDVVASFNAANNIDMICRA 238 (308)
Q Consensus 160 ~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdP~~-~~~~~~~~rg~g~~fg~~~~~~fl~~~~l~~iirg 238 (308)
+++|||||++|.+.++++++.++|+.+.|..+.+.|++||||.. ..+|.+++||.|++||++++++||++||+++||||
T Consensus 161 ~i~cvHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~ 240 (293)
T cd07414 161 KIFCMHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGKDVVAKFLNKHDLDLICRA 240 (293)
T ss_pred cEEEEccCCCcccCcHHHHhcccCCCCCCchhhHhhhhccCcccccCCCccCCCCcceecCHHHHHHHHHHcCCeEEEEC
Confidence 99999999999999999999999999999999999999999985 67899999999999999999999999999999999
Q ss_pred cccccCCceeecCCeeEEEEeCCCCCccCCCcEEEEEEcCCCeeEEEEEecC
Q psy13699 239 HQLVMEGYKWHFNETVLTVWSAPNYCYRCGNVAAILELNENLQREFTIFEAA 290 (308)
Q Consensus 239 H~~~~~G~~~~~~~~~iTifSa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~ 290 (308)
||++++||++.++++|+||||||+||+.++|+||+|.|+++.+++|++|+|.
T Consensus 241 He~~~~G~~~~~~~~~iTvfSa~~Y~~~~~N~~a~l~i~~~~~~~~~~~~~~ 292 (293)
T cd07414 241 HQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA 292 (293)
T ss_pred CccccCeEEEeCCCcEEEEecCCcccCCCCceEEEEEECCCCcEEEEEecCC
Confidence 9999999999999999999999999999999999999999999999999854
No 9
>KOG0374|consensus
Probab=100.00 E-value=4.1e-73 Score=529.24 Aligned_cols=271 Identities=47% Similarity=0.955 Sum_probs=265.1
Q ss_pred CCCHHHHHHHHHHHHHHHhhCCCceeecCCcceeccCCCCHHHHHHHHHhcC-CCCCCcEEeccCeecCCCCcHHHHHHH
Q psy13699 20 PIKESEVKALCAKAREILVEESNVQRIDSPVTVCGDIHGQFYDLKELFKVGG-DVPETNYLFMGDFVDRGFYSVETFLLL 98 (308)
Q Consensus 20 ~~~~~~~~~l~~~~~~il~~ep~l~~~~~~i~viGDIHG~~~~L~~ll~~~~-~~~~~~~vfLGD~vDrG~~s~evl~~l 98 (308)
.++++++.+||.++.+++.++|+++++++||.|+|||||++.+|.+++...+ .|+..+|||||||||||++|+|++.+|
T Consensus 31 ~l~~~ei~~l~~~~~~if~~~~~l~e~~aPV~i~GDiHGq~~DLlrlf~~~g~~pp~~~ylFLGDYVDRG~~slE~i~LL 110 (331)
T KOG0374|consen 31 PLSKSEIIKLCDKAREIFLSQPTLLELSAPVKIVGDIHGQFGDLLRLFDLLGSFPPDQNYVFLGDYVDRGKQSLETICLL 110 (331)
T ss_pred eccHHHHHHHHHHHHHHhcCCCceeecCCCEEEEccCcCCHHHHHHHHHhcCCCCCcccEEEecccccCCccceEEeehh
Confidence 4899999999999999999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHhhhhCCCcEEEECCCcchhhhHhhhCChHHHHHHhCCchhhhhhhHHhhccccceeEeCeEEEEcCCCCCCCCCHHHH
Q psy13699 99 LALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSITVWRYCTEIFDYLSLSAIIDGRIFCVHGGLSPSIQTLDQI 178 (308)
Q Consensus 99 ~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~LPl~~~i~~~~l~vHgGi~p~~~~~~~i 178 (308)
+++|++||+++++||||||.+.++..|||++||.++|+...+|+.|++.|++||++++++++++|+|||++|.+.+++++
T Consensus 111 ~a~Ki~yp~~~~lLRGNHE~~~in~~yGFydE~~rr~~~~~~w~~F~~~f~~mp~~a~i~~kI~CmhGGlsp~l~~~~~i 190 (331)
T KOG0374|consen 111 FALKIKYPENVFLLRGNHECASINRIYGFYDECKRRYGEIKLWKAFNDAFNCLPLAALIDGKILCMHGGLSPHLKSLDQI 190 (331)
T ss_pred hhhhhhCCceEEEeccccccccccceeeeHHHHHHhcchHHHHHHHHHHHhhCchhheecceEEEecCCCChhhcChHHH
Confidence 99999999999999999999999999999999999997679999999999999999999999999999999999999999
Q ss_pred HhhcccCCCCCCCcccccccCCCCC-CCCCccCCCCCeeEeChhHHHhhhhhcCceEEEeecccccCCceeecCCeeEEE
Q psy13699 179 RTIDRKQEVPHDGPMCDLLWSDPED-TQGWGVSPRGAGYLFGSDVVASFNAANNIDMICRAHQLVMEGYKWHFNETVLTV 257 (308)
Q Consensus 179 ~~i~r~~~~~~~~~~~dllWsdP~~-~~~~~~~~rg~g~~fg~~~~~~fl~~~~l~~iirgH~~~~~G~~~~~~~~~iTi 257 (308)
+.|.||.++|+.++++|++||||.. ..+|..+.||.+++||++++.+||+++++++|+||||++.+||+++.+++++||
T Consensus 191 ~~i~rp~~~~~~gll~DLlWsdp~~~~~g~~~n~Rg~s~~fg~~~v~~f~~~~~ldlivRaHqvv~dGyeffa~r~lvTI 270 (331)
T KOG0374|consen 191 RAIPRPTDSPDKGLLCDLLWSDPDDDVPGWEENDRGVSFTFGPAVVEDFCKKLDLDLIVRAHQVVEDGYEFFAGRKLVTI 270 (331)
T ss_pred hhccCCcCCCccceeeeeeecCCCCCCCCcccCCCceeeEecHHHHHHHHHHhCcceEEEcCccccccceEecCceEEEE
Confidence 9999999999999999999999987 689999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCCccCCCcEEEEEEcCCCeeEEEEEecC
Q psy13699 258 WSAPNYCYRCGNVAAILELNENLQREFTIFEAA 290 (308)
Q Consensus 258 fSa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~ 290 (308)
||||+|||.+.|.||+|.+|+++.++|+++.|.
T Consensus 271 FSAP~Ycg~~~n~gavm~Vd~~l~~sf~~l~p~ 303 (331)
T KOG0374|consen 271 FSAPNYCGEFDNAGAVMRVDKNLKCSFVILRPE 303 (331)
T ss_pred ecCchhccccCCceEEEEECCCCeEEEEEeccc
Confidence 999999999999999999999999999999995
No 10
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=100.00 E-value=3.1e-72 Score=521.78 Aligned_cols=286 Identities=44% Similarity=0.788 Sum_probs=269.7
Q ss_pred HHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHhhCCCceeecCCcceeccCCCCHHHHHHHHHhcCCCCCCcEEeccCeec
Q psy13699 7 DLDRQIEQLKRCDPIKESEVKALCAKAREILVEESNVQRIDSPVTVCGDIHGQFYDLKELFKVGGDVPETNYLFMGDFVD 86 (308)
Q Consensus 7 ~~~~~i~~~~~~~~~~~~~~~~l~~~~~~il~~ep~l~~~~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~vD 86 (308)
.++.+++++.+++.++++++.+||++|+++|++||++++++.|++||||||||+.+|.++|+..+.++.++|||||||||
T Consensus 2 ~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~e~~l~~i~~~i~ViGDIHG~~~dL~~l~~~~g~~~~~~ylFLGDyVD 81 (305)
T cd07416 2 RIDVLKAHFMREGRLSEEDALRIITEGAEILRQEPNLLRIEAPVTVCGDIHGQFYDLLKLFEVGGSPANTRYLFLGDYVD 81 (305)
T ss_pred CHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCeEccCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceEEEECCccC
Confidence 46789999999999999999999999999999999999999999999999999999999999999889999999999999
Q ss_pred CCCCcHHHHHHHHHhhhhCCCcEEEECCCcchhhhHhhhCChHHHHHHhCCchhhhhhhHHhhccccceeEeCeEEEEcC
Q psy13699 87 RGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSITVWRYCTEIFDYLSLSAIIDGRIFCVHG 166 (308)
Q Consensus 87 rG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~LPl~~~i~~~~l~vHg 166 (308)
||++|+||+.+|+++|+.+|.++++||||||.+.++..+||..++..+| ...+|..+.++|++||++++++++++||||
T Consensus 82 RG~~s~Evi~lL~~lki~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~y-~~~l~~~~~~~f~~LPlaaii~~~i~~vHG 160 (305)
T cd07416 82 RGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKY-SERVYDACMEAFDCLPLAALMNQQFLCVHG 160 (305)
T ss_pred CCCChHHHHHHHHHHHhhcCCCEEEEeCCCcHHHHHHhhCchhHHHHhc-cHHHHHHHHHHHhhccceeEEcCCEEEEcC
Confidence 9999999999999999999999999999999999999999999999998 467899999999999999999999999999
Q ss_pred CCCCCCCCHHHHHhhcccCCCCCCCcccccccCCCCCCC-------CCccC-CCCCeeEeChhHHHhhhhhcCceEEEee
Q psy13699 167 GLSPSIQTLDQIRTIDRKQEVPHDGPMCDLLWSDPEDTQ-------GWGVS-PRGAGYLFGSDVVASFNAANNIDMICRA 238 (308)
Q Consensus 167 Gi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdP~~~~-------~~~~~-~rg~g~~fg~~~~~~fl~~~~l~~iirg 238 (308)
|++|.+.+++++++++|+.+.|..+.+.|++||||.+.. +|.++ +||.|++||++++.+||++|++++||||
T Consensus 161 Gi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~~~Rg~g~~fG~~~~~~Fl~~n~l~~iiR~ 240 (305)
T cd07416 161 GLSPELKTLDDIRKLDRFREPPAFGPMCDLLWSDPLEDFGNEKTQEHFVHNTVRGCSYFYSYRAVCEFLQKNNLLSIIRA 240 (305)
T ss_pred CCCcccccHHHhcccCCCCCCCCCCcceeeeecCcccccccccccccccccCCCCCceecCHHHHHHHHHHcCCeEEEEe
Confidence 999999999999999999998989999999999997522 47654 8999999999999999999999999999
Q ss_pred cccccCCceeecCC------eeEEEEeCCCCCccCCCcEEEEEEcCCCeeEEEEEecCCCCC
Q psy13699 239 HQLVMEGYKWHFNE------TVLTVWSAPNYCYRCGNVAAILELNENLQREFTIFEAAPQES 294 (308)
Q Consensus 239 H~~~~~G~~~~~~~------~~iTifSa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~~~~~ 294 (308)
||++++||++.+++ +|+||||||+||+.++|+||+|.++++ ..+|++|.+.|+-+
T Consensus 241 He~~~~G~~~~~~~~~~~~~~~iTvFSa~~Y~~~~~N~~a~l~i~~~-~~~~~~~~~~~~~~ 301 (305)
T cd07416 241 HEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENN-VMNIRQFNCSPHPY 301 (305)
T ss_pred ccccccceEEecCCCcCCCCcEEEEeCCccccCCCCceEEEEEEcCC-cceEEEecCCCCCC
Confidence 99999999998876 899999999999999999999999987 47999999998644
No 11
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=100.00 E-value=3.3e-72 Score=522.85 Aligned_cols=287 Identities=41% Similarity=0.754 Sum_probs=271.2
Q ss_pred HHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHhhCCCceeecCC----cceeccCCCCHHHHHHHHHhcCCCC-CCcEEe
Q psy13699 6 QDLDRQIEQLKRCDPIKESEVKALCAKAREILVEESNVQRIDSP----VTVCGDIHGQFYDLKELFKVGGDVP-ETNYLF 80 (308)
Q Consensus 6 ~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~il~~ep~l~~~~~~----i~viGDIHG~~~~L~~ll~~~~~~~-~~~~vf 80 (308)
+-++++++++++...++.+++.+||++|+++|++||++++++.| ++||||||||+.+|.++|+..+.++ .++|||
T Consensus 14 ~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~il~~ep~l~~i~~p~~~~~~VvGDIHG~~~dL~~ll~~~g~~~~~~~ylF 93 (316)
T cd07417 14 EFVKEMIEWFKDQKKLHKKYAYQILLQVKELLKKLPSLVEITIPEGEKITVCGDTHGQFYDLLNIFELNGLPSETNPYLF 93 (316)
T ss_pred HHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCcceeccCCCCceeEEeecccCCHHHHHHHHHhcCCCCccCeEEE
Confidence 46889999999998999999999999999999999999999865 9999999999999999999888654 467999
Q ss_pred ccCeecCCCCcHHHHHHHHHhhhhCCCcEEEECCCcchhhhHhhhCChHHHHHHhCCchhhhhhhHHhhccccceeEeCe
Q psy13699 81 MGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSITVWRYCTEIFDYLSLSAIIDGR 160 (308)
Q Consensus 81 LGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~LPl~~~i~~~ 160 (308)
||||||||++|+||+.+++++|+.+|+++++||||||.+.++..|||..|+..+|+ ..+|+.+.++|++||++++++++
T Consensus 94 LGDyVDRG~~S~Evl~ll~~lki~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~k~~-~~l~~~~~~~f~~LPlaaii~~~ 172 (316)
T cd07417 94 NGDFVDRGSFSVEVILTLFAFKLLYPNHFHLNRGNHETDNMNKMYGFEGEVKAKYN-EQMFDLFSEVFNWLPLAHLINGK 172 (316)
T ss_pred EeeEecCCCChHHHHHHHHHhhhccCCceEEEeeccchHHHHHHhhhcchhhhccc-HHHHHHHHHHHHhchHhheeCCe
Confidence 99999999999999999999999999999999999999999999999999999994 67999999999999999999999
Q ss_pred EEEEcCCC-CCCCCCHHHHHhhcccCCCCCCCcccccccCCCCCCCCCccCCCCCeeEeChhHHHhhhhhcCceEEEeec
Q psy13699 161 IFCVHGGL-SPSIQTLDQIRTIDRKQEVPHDGPMCDLLWSDPEDTQGWGVSPRGAGYLFGSDVVASFNAANNIDMICRAH 239 (308)
Q Consensus 161 ~l~vHgGi-~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdP~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~l~~iirgH 239 (308)
++|||||+ +|...+++++++++|+.+.|.++.+.|+|||||.+..+|.+++||.|+.||++++.+||++|++++|||||
T Consensus 173 ~~~vHgGi~~~~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~s~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~H 252 (316)
T cd07417 173 VLVVHGGLFSDDGVTLDDIRKIDRFRQPPDSGLMCELLWSDPQPQPGRSPSKRGVGCQFGPDVTKRFLEENNLEYIIRSH 252 (316)
T ss_pred EEEEccccccCCCccHHHhhcccCCCCCCccccceeeeecCCCCCCCCCccCCCCceEeCHHHHHHHHHHcCCcEEEECC
Confidence 99999999 56788999999999998888899999999999998888999999999999999999999999999999999
Q ss_pred ccccCCceeecCCeeEEEEeCCCCCccCCCcEEEEEEcC-CCeeEEEEEecCCCC
Q psy13699 240 QLVMEGYKWHFNETVLTVWSAPNYCYRCGNVAAILELNE-NLQREFTIFEAAPQE 293 (308)
Q Consensus 240 ~~~~~G~~~~~~~~~iTifSa~~y~~~~~n~~avl~i~~-~~~~~~~~~~~~~~~ 293 (308)
|++++||++.++++|+||||||+||+.++|+||+|.|++ +++++|++|++.+..
T Consensus 253 e~~~~G~~~~~~~~~~TvfSa~~Y~~~~~N~ga~~~i~~~~~~~~~~~~~~~~~~ 307 (316)
T cd07417 253 EVKDEGYEVEHDGKCITVFSAPNYCDQMGNKGAFIRITGSDLKPKFTQFEAVPHP 307 (316)
T ss_pred cccceeEEEecCCeEEEEeCCccccCCCCcceEEEEEeCCCceeeeEeccCCCCC
Confidence 999999999999999999999999999999999999999 899999999988743
No 12
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=100.00 E-value=8e-71 Score=505.26 Aligned_cols=269 Identities=49% Similarity=0.954 Sum_probs=259.0
Q ss_pred CCHHHHHHHHHHHHHHHhhCCCceeecCCcceeccCCCCHHHHHHHHHhcCCCCCCcEEeccCeecCCCCcHHHHHHHHH
Q psy13699 21 IKESEVKALCAKAREILVEESNVQRIDSPVTVCGDIHGQFYDLKELFKVGGDVPETNYLFMGDFVDRGFYSVETFLLLLA 100 (308)
Q Consensus 21 ~~~~~~~~l~~~~~~il~~ep~l~~~~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~ 100 (308)
++++++.+||++|+++|++||+++++++|++|||||||++.+|.++|+..+.++.+++||||||||||++|+|++.++++
T Consensus 1 ~~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~VDrG~~s~e~l~~l~~ 80 (271)
T smart00156 1 LYAEEILELLREVKEIFRQEPNLVEVSAPVTVCGDIHGQFDDLLRLFDLNGPPPDTNYVFLGDYVDRGPFSIEVILLLFA 80 (271)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCeEEeCCCEEEEEeCcCCHHHHHHHHHHcCCCCCceEEEeCCccCCCCChHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999988999999999999999999999999999
Q ss_pred hhhhCCCcEEEECCCcchhhhHhhhCChHHHHHHhCCchhhhhhhHHhhccccceeEeCeEEEEcCCCCCCCCCHHHHHh
Q psy13699 101 LKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSITVWRYCTEIFDYLSLSAIIDGRIFCVHGGLSPSIQTLDQIRT 180 (308)
Q Consensus 101 lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~LPl~~~i~~~~l~vHgGi~p~~~~~~~i~~ 180 (308)
+|+.+|.++++||||||.+.++..+||..|+..+|+ ..+|+.+.++|++||++++++++++|||||++|.+.+++++++
T Consensus 81 lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~-~~l~~~~~~~f~~LPl~aii~~~~~~vHgGi~~~~~~l~~i~~ 159 (271)
T smart00156 81 LKILYPNRVVLLRGNHESRSMNEIYGFYDECKRKYG-EEIYEKFQEAFSWLPLAALIDNKILCMHGGLSPDLTTLDDIRK 159 (271)
T ss_pred HHhcCCCCEEEEeccccHHHHHHhccchhhhhhhcC-HHHHHHHHHHHhhChhheEEcCeEEEEecCCCCccCCHHHHhc
Confidence 999999999999999999999999999999999995 6899999999999999999999999999999999999999999
Q ss_pred hcccCCCCCCCcccccccCCCC-CCCCCccCCCCCeeEeChhHHHhhhhhcCceEEEeecccccCCceeecCCeeEEEEe
Q psy13699 181 IDRKQEVPHDGPMCDLLWSDPE-DTQGWGVSPRGAGYLFGSDVVASFNAANNIDMICRAHQLVMEGYKWHFNETVLTVWS 259 (308)
Q Consensus 181 i~r~~~~~~~~~~~dllWsdP~-~~~~~~~~~rg~g~~fg~~~~~~fl~~~~l~~iirgH~~~~~G~~~~~~~~~iTifS 259 (308)
++|+.+.+.++.+.|++||||. ...+|.+++||.|+.||++++.+||++|++++||||||++++||++.++++++||||
T Consensus 160 i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~TvfS 239 (271)
T smart00156 160 LKRPQEPPDEGLLIDLLWSDPDQPVDGFQPSIRGASYYFGPDAVDEFLKKNNLKLIIRAHQVVDDGYEFFHDRKLVTIFS 239 (271)
T ss_pred ccCCCCCCchhhhhheeecCCCcccCCCccCCCCCccccCHHHHHHHHHHCCCeEEEecCcccCCcEEEecCCcEEEEEC
Confidence 9999999999999999999996 478899999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccCCCcEEEEEEcCCCeeEEEEEecC
Q psy13699 260 APNYCYRCGNVAAILELNENLQREFTIFEAA 290 (308)
Q Consensus 260 a~~y~~~~~n~~avl~i~~~~~~~~~~~~~~ 290 (308)
||+||+.++|+||++.++++.+++|++|++.
T Consensus 240 a~~y~~~~~n~~a~~~i~~~~~~~~~~~~~~ 270 (271)
T smart00156 240 APNYCGRFGNKAAVLKVDKDLKLSFEQFKPG 270 (271)
T ss_pred CcccccCCCceEEEEEECCCCcEEEEEecCC
Confidence 9999998899999999999999999999753
No 13
>KOG0371|consensus
Probab=100.00 E-value=1.1e-70 Score=482.34 Aligned_cols=301 Identities=63% Similarity=1.182 Sum_probs=290.6
Q ss_pred HHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHhhCCCceeecCCcceeccCCCCHHHHHHHHHhcCCCCCCcEEeccCeec
Q psy13699 7 DLDRQIEQLKRCDPIKESEVKALCAKAREILVEESNVQRIDSPVTVCGDIHGQFYDLKELFKVGGDVPETNYLFMGDFVD 86 (308)
Q Consensus 7 ~~~~~i~~~~~~~~~~~~~~~~l~~~~~~il~~ep~l~~~~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~vD 86 (308)
.++.+|+++..+.++++.++..+|..|+++|.+|.++..+..|++|+||+|||+++|.++++..|..++..|+|+|||||
T Consensus 19 ~vd~~ie~L~~ck~lse~~v~~lc~~a~~~L~~e~nV~~v~~pvtvcGDvHGqf~dl~ELfkiGG~~pdtnylfmGDyvd 98 (319)
T KOG0371|consen 19 DVDPWIEQLYKCKPLSEVDVSSLCLLAKEILDKEENVQPVNCPVTVCGDVHGQFHDLIELFKIGGLAPDTNYLFMGDYVD 98 (319)
T ss_pred ccccchHHHHhcCCCccccchhHHHHHHHHHhccccccccccceEEecCcchhHHHHHHHHHccCCCCCcceeeeeeecc
Confidence 68899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHHHhhhhCCCcEEEECCCcchhhhHhhhCChHHHHHHhCCchhhhhhhHHhhccccceeEeCeEEEEcC
Q psy13699 87 RGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSITVWRYCTEIFDYLSLSAIIDGRIFCVHG 166 (308)
Q Consensus 87 rG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~LPl~~~i~~~~l~vHg 166 (308)
||++|+|++.+|.++|++||++|.+||||||...+...|||++||.+|||+...|..|.+.|+++|+.++|++++||+||
T Consensus 99 rGy~SvetVS~lva~Kvry~~rvtilrGNHEsrqitqvygfydeclRkyg~anvw~~Ftdlfdy~P~tali~~~ifc~HG 178 (319)
T KOG0371|consen 99 RGYYSVETVSLLVALKVRYPDRVTILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESKIFCLHG 178 (319)
T ss_pred cccchHHHHHHHHHhhccccceeEEecCchHHHHHHHHHhhHHHHHhhcccccchHHhhhhhhccchHhhhccceeeccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCHHHHHhhcccCCCCCCCcccccccCCCCCCCCCccCCCCCeeEeChhHHHhhhhhcCceEEEeecccccCCc
Q psy13699 167 GLSPSIQTLDQIRTIDRKQEVPHDGPMCDLLWSDPEDTQGWGVSPRGAGYLFGSDVVASFNAANNIDMICRAHQLVMEGY 246 (308)
Q Consensus 167 Gi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdP~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~l~~iirgH~~~~~G~ 246 (308)
|++|++.++++++.+.|..++|+++..+|+|||||.+.-+|..++||.|+.||.+..++|-.+||++++-|+||.+.+||
T Consensus 179 gLspsi~tld~~r~~dr~~evphegpmcDlLwsdpddr~gwg~sprgag~tfg~di~~~fn~~n~lslisRahqlvm~g~ 258 (319)
T KOG0371|consen 179 GLSPSIDTLDLIRLLDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHKNGLSLISRAHQLVMEGY 258 (319)
T ss_pred CcCcccchHHHHHHHHHhhcccCCCChhheeccCcccCCCCCCCCCCCCcccchhhHHHhhccCCchHhHHHHHHHhccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeecCCeeEEEEeCCCCCccCCCcEEEEEEcCCCeeEEEEEecCCCCCCCCCCCCCCCCCCC
Q psy13699 247 KWHFNETVLTVWSAPNYCYRCGNVAAILELNENLQREFTIFEAAPQESRGIPSKKPQADYFL 308 (308)
Q Consensus 247 ~~~~~~~~iTifSa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (308)
.+.+...++|||||||||.+|+|.+|++.++++...+|.||+|+|..-.. ...+.++||||
T Consensus 259 nW~~~~~~vtiFSapnycYrcgn~a~i~e~d~~~~~~f~q~~psp~k~e~-~vtr~tpDYfL 319 (319)
T KOG0371|consen 259 NWYHLWNVVTIFSAPNYCYRCGNQAAIMERDDTKNYDFLQFDPSPRKVEP-DVTRKTPDYFL 319 (319)
T ss_pred ceeeecceeEEccCCchhhccccHHHHhhhhhccCcceEEecCCcccccc-ccccCCCCCcC
Confidence 99999999999999999999999999999999999999999998744322 55577899997
No 14
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=100.00 E-value=6.3e-68 Score=500.54 Aligned_cols=286 Identities=38% Similarity=0.638 Sum_probs=257.2
Q ss_pred HHHHHHHHHHhhC----------CCCCHHHHHHHHHHHHHHHhhCCCceeec----CCcceeccCCCCHHHHHHHHHhcC
Q psy13699 6 QDLDRQIEQLKRC----------DPIKESEVKALCAKAREILVEESNVQRID----SPVTVCGDIHGQFYDLKELFKVGG 71 (308)
Q Consensus 6 ~~~~~~i~~~~~~----------~~~~~~~~~~l~~~~~~il~~ep~l~~~~----~~i~viGDIHG~~~~L~~ll~~~~ 71 (308)
+.++.||+.++.. ..++.+++.+||++|++||++||++++++ .+++|||||||++.+|.++|+..+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~a~~il~~ep~ll~i~~~~~~~i~VvGDIHG~~~dL~~ll~~~g 89 (377)
T cd07418 10 EWVHELMSVFEWSSRNLPPSELPSVLPVNVFDSLVLTAHKILHREPNCVRIDVEDVCEVVVVGDVHGQLHDVLFLLEDAG 89 (377)
T ss_pred HHHHHHHHHHHhcccccCchhhccCCCHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCEEEEEecCCCHHHHHHHHHHhC
Confidence 3567788887644 45789999999999999999999999998 799999999999999999999888
Q ss_pred CCCC-CcEEeccCeecCCCCcHHHHHHHHHhhhhCCCcEEEECCCcchhhhHhhhCChHHHHHHhCC--chhhhhhhHHh
Q psy13699 72 DVPE-TNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGS--ITVWRYCTEIF 148 (308)
Q Consensus 72 ~~~~-~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~--~~~~~~~~~~~ 148 (308)
.++. ++|||||||||||++|+||+.+++++|+.+|+++++||||||.+.++..+||..++..+|+. ..+|+.+.++|
T Consensus 90 ~~~~~~~ylFLGDyVDRGp~SlEvl~lL~~lki~~p~~v~lLRGNHE~~~i~~~~Gf~~E~~~~y~~~~~~l~~~~~~~f 169 (377)
T cd07418 90 FPDQNRFYVFNGDYVDRGAWGLETFLLLLSWKVLLPDRVYLLRGNHESKFCTSMYGFEQEVLTKYGDKGKHVYRKCLGCF 169 (377)
T ss_pred CCCCCceEEEeccccCCCCChHHHHHHHHHHhhccCCeEEEEeeecccccchhhcccchhhhhhcCchHHHHHHHHHHHH
Confidence 7654 56999999999999999999999999999999999999999999999999999999999975 47999999999
Q ss_pred hccccceeEeCeEEEEcCCCC---------------------------CCCCCHHHHHhhcccC-CCCCCC---cccccc
Q psy13699 149 DYLSLSAIIDGRIFCVHGGLS---------------------------PSIQTLDQIRTIDRKQ-EVPHDG---PMCDLL 197 (308)
Q Consensus 149 ~~LPl~~~i~~~~l~vHgGi~---------------------------p~~~~~~~i~~i~r~~-~~~~~~---~~~dll 197 (308)
++||+++++++++|||||||+ |.+.++++|++++|+. +.|..+ ++.|+|
T Consensus 170 ~~LPlaavI~~~i~cvHGGI~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~r~~~~~~~~~~~~i~~dlL 249 (377)
T cd07418 170 EGLPLASIIAGRVYTAHGGLFRSPSLPKRKKQKGKNRRVLLLEPESESLKLGTLDDLMKARRSVLDPPGEGSNLIPGDVL 249 (377)
T ss_pred HhCCcEEEECCCEEEECCCcCCcccccccccccccccccccccccccCCCCCCHHHHhhCCCCCCCCCCCCccccceeeE
Confidence 999999999999999999993 4567899999999974 555444 468999
Q ss_pred cCCCCCCCCCccC-CCCCeeEeChhHHHhhhhhcCceEEEeeccc------------ccCCceeecC---CeeEEEEeCC
Q psy13699 198 WSDPEDTQGWGVS-PRGAGYLFGSDVVASFNAANNIDMICRAHQL------------VMEGYKWHFN---ETVLTVWSAP 261 (308)
Q Consensus 198 WsdP~~~~~~~~~-~rg~g~~fg~~~~~~fl~~~~l~~iirgH~~------------~~~G~~~~~~---~~~iTifSa~ 261 (308)
||||.+..+|.++ .||.|++||++++++||++|++++||||||+ +++||++.++ ++|+||||||
T Consensus 250 WSDP~~~~g~~~~~~RG~g~~FG~~~~~~FL~~n~l~~IIRsHe~~~~~~~~~~~~~v~~Gy~~~~~~~~~~liTvFSa~ 329 (377)
T cd07418 250 WSDPSLTPGLSPNKQRGIGLLWGPDCTEEFLEKNNLKLIIRSHEGPDAREKRPGLAGMNKGYTVDHDVESGKLITLFSAP 329 (377)
T ss_pred eeCCccCCCCCccCCCCCccccCHHHHHHHHHHcCCcEEEECCCCcccccccccchhhhCceEEeccCCCCcEEEEecCC
Confidence 9999987788776 7999999999999999999999999999996 6799999887 8999999999
Q ss_pred CCC------ccCCCcEEEEEEcCC--CeeEEEEEecCC
Q psy13699 262 NYC------YRCGNVAAILELNEN--LQREFTIFEAAP 291 (308)
Q Consensus 262 ~y~------~~~~n~~avl~i~~~--~~~~~~~~~~~~ 291 (308)
+|| +.++|+||++.++.+ ...+|++|+++.
T Consensus 330 nY~~~~~~~~~~~N~ga~~~~~~~~~~~~~~~~~~~~~ 367 (377)
T cd07418 330 DYPQFQATEERYNNKGAYIILQPPDFSDPQFHTFEAVK 367 (377)
T ss_pred ccccccccccccCcceEEEEEecCCCCCccceEeeccC
Confidence 999 568999999999764 579999999983
No 15
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=100.00 E-value=7.9e-68 Score=493.99 Aligned_cols=271 Identities=42% Similarity=0.749 Sum_probs=252.5
Q ss_pred CCCCHHHHHHHHHHHHHHHhhCCCceeecCCcceeccCCCCHHHHHHHHHhcCCCCC--------CcEEeccCeecCCCC
Q psy13699 19 DPIKESEVKALCAKAREILVEESNVQRIDSPVTVCGDIHGQFYDLKELFKVGGDVPE--------TNYLFMGDFVDRGFY 90 (308)
Q Consensus 19 ~~~~~~~~~~l~~~~~~il~~ep~l~~~~~~i~viGDIHG~~~~L~~ll~~~~~~~~--------~~~vfLGD~vDrG~~ 90 (308)
..++++++.+||++|++||++||++++++.+++||||||||+++|.++|+..+.++. .+|||||||||||++
T Consensus 19 ~~~~~~~i~~l~~~~~~il~~e~~~~~i~~~~~viGDIHG~~~~L~~ll~~~g~~~~~~~~~~~~~~~vfLGDyVDRGp~ 98 (311)
T cd07419 19 FFFNWNEILELCDAAEDIFKQEPMVLRLRAPIKIFGDIHGQFGDLMRLFDEYGSPVTEAAGDIEYIDYLFLGDYVDRGSN 98 (311)
T ss_pred cCCCHHHHHHHHHHHHHHHHhCCCeEeeCCCEEEEEeccCCHHHHHHHHHHcCCCcccccCCCcCceEEEECCccCCCCC
Confidence 458999999999999999999999999999999999999999999999998876543 579999999999999
Q ss_pred cHHHHHHHHHhhhhCCCcEEEECCCcchhhhHhhhCChHHHHHHhCC-----chhhhhhhHHhhccccceeEeCeEEEEc
Q psy13699 91 SVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGS-----ITVWRYCTEIFDYLSLSAIIDGRIFCVH 165 (308)
Q Consensus 91 s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~-----~~~~~~~~~~~~~LPl~~~i~~~~l~vH 165 (308)
|+||+.+++++++.+|.++++||||||.+.++..+||..++..+|+. ..+|..+.++|++||++++++++++|||
T Consensus 99 s~evl~ll~~lk~~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~~~~~~~~~l~~~~~~~f~~LPl~avi~~~~l~vH 178 (311)
T cd07419 99 SLETICLLLALKVKYPNQIHLIRGNHEDRDINALFGFREECKERLGEDPNDGDSVWRRINRLFEWLPLAAIIEDKILCMH 178 (311)
T ss_pred hHHHHHHHHHhhhcCCCcEEEeccccchHHHHHHhcccHHHHHhcCccchhhHHHHHHHHHHHHhCchhheecccEEEEc
Confidence 99999999999999999999999999999999999999999988865 3689999999999999999999999999
Q ss_pred CCCCCCCCCHHHHHhhcccC-CCCCCCcccccccCCCCC---CCCCccCC---CCCe--eEeChhHHHhhhhhcCceEEE
Q psy13699 166 GGLSPSIQTLDQIRTIDRKQ-EVPHDGPMCDLLWSDPED---TQGWGVSP---RGAG--YLFGSDVVASFNAANNIDMIC 236 (308)
Q Consensus 166 gGi~p~~~~~~~i~~i~r~~-~~~~~~~~~dllWsdP~~---~~~~~~~~---rg~g--~~fg~~~~~~fl~~~~l~~ii 236 (308)
||++|.+.++++++.+.|+. ..+.++.+.|++||||.+ ..+|.+++ ||.| +.||++++++||++||+++||
T Consensus 179 gGi~p~~~~l~~i~~i~r~~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~rg~g~~~~fg~~~~~~Fl~~n~l~~ii 258 (311)
T cd07419 179 GGIGRSINHVSEIEDLKRPLTMEFGEQVVMDLLWSDPTENDSVLGLRPNAIDPRGPGLIVKFGPDRVHRFLEENDLQMII 258 (311)
T ss_pred cCCCCCCCcHHHHhhcCCCCCCCCCCcceeeeeccCccccccccccccCCCCCCCCCcceeECHHHHHHHHHHCCCeEEE
Confidence 99999999999999999997 445677899999999985 34676665 9998 799999999999999999999
Q ss_pred eecccccCCceeecCCeeEEEEeCCCCCccCCCcEEEEEEcCCCeeEEEEEec
Q psy13699 237 RAHQLVMEGYKWHFNETVLTVWSAPNYCYRCGNVAAILELNENLQREFTIFEA 289 (308)
Q Consensus 237 rgH~~~~~G~~~~~~~~~iTifSa~~y~~~~~n~~avl~i~~~~~~~~~~~~~ 289 (308)
||||++++||++.++++|+||||||+||+.++|.||++.++++.++++++++|
T Consensus 259 RgHe~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~~ai~~i~~~~~~~~~~~~~ 311 (311)
T cd07419 259 RAHECVMDGFERFAQGKLITLFSATNYCGTAGNAGAILVLGRDLTIIPKLIHP 311 (311)
T ss_pred EechhhhCCeEEeCCCeEEEEecCCcccCCCCceEEEEEECCCCcEeEEEeCC
Confidence 99999999999999999999999999999999999999999999999999875
No 16
>KOG0375|consensus
Probab=100.00 E-value=1.6e-66 Score=473.50 Aligned_cols=286 Identities=42% Similarity=0.776 Sum_probs=267.3
Q ss_pred HHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHhhCCCceeecCCcceeccCCCCHHHHHHHHHhcCCCCCCcEEeccCeec
Q psy13699 7 DLDRQIEQLKRCDPIKESEVKALCAKAREILVEESNVQRIDSPVTVCGDIHGQFYDLKELFKVGGDVPETNYLFMGDFVD 86 (308)
Q Consensus 7 ~~~~~i~~~~~~~~~~~~~~~~l~~~~~~il~~ep~l~~~~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~vD 86 (308)
..+.+-+++.....++++..+.|+.++.++|++||+++++++||.|+|||||++.||.++|+..|.|..++|+|||||||
T Consensus 47 ~~~~Lr~Hf~~EGrl~ee~alrIi~~~a~llr~Eknmi~v~APiTVCGDIHGQf~DLmKLFEVGG~PA~t~YLFLGDYVD 126 (517)
T KOG0375|consen 47 RHDVLRNHFIKEGRLEEEQALRIINEGAALLRQEKNMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVD 126 (517)
T ss_pred chHHHHHHHHhhcchhHHHHHHHHHHHHHHHhcCCceEeccCCeeEecccchHHHHHHHHHHccCCcccceeEeeccccc
Confidence 35666777777888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHHHhhhhCCCcEEEECCCcchhhhHhhhCChHHHHHHhCCchhhhhhhHHhhccccceeEeCeEEEEcC
Q psy13699 87 RGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSITVWRYCTEIFDYLSLSAIIDGRIFCVHG 166 (308)
Q Consensus 87 rG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~LPl~~~i~~~~l~vHg 166 (308)
||..|+|++.+|.+||+.||+..++||||||++.+...+.|..||..|| +.++|+.+.+.|+.||+||+.++.++||||
T Consensus 127 RGyFSiECvlYLwsLKi~yp~tl~lLRGNHECrHLT~YFTFKqEc~iKY-se~vYdaCmesFd~LPLAAlmNqQflCVHG 205 (517)
T KOG0375|consen 127 RGYFSIECVLYLWSLKINYPKTLFLLRGNHECRHLTEYFTFKQECKIKY-SERVYDACMESFDCLPLAALMNQQFLCVHG 205 (517)
T ss_pred cceeeeehHHHHHHHhcCCCCeEEEecCCcchhhhHhHhhHHHHHhHhc-cHHHHHHHHHHhccchHHHHhcCceEEecC
Confidence 9999999999999999999999999999999999999999999999999 789999999999999999999999999999
Q ss_pred CCCCCCCCHHHHHhhcccCCCCCCCcccccccCCCCC-------CCCCc-cCCCCCeeEeChhHHHhhhhhcCceEEEee
Q psy13699 167 GLSPSIQTLDQIRTIDRKQEVPHDGPMCDLLWSDPED-------TQGWG-VSPRGAGYLFGSDVVASFNAANNIDMICRA 238 (308)
Q Consensus 167 Gi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdP~~-------~~~~~-~~~rg~g~~fg~~~~~~fl~~~~l~~iirg 238 (308)
|+||.+.++++|+++.|..++|..++.+|+|||||.+ .+.|. .+.||++|.|...++.+||+.||+-.|||+
T Consensus 206 GlSPEi~tl~DIr~l~RF~EpPa~GpmCDLLWsDPlEdfgnek~~e~f~hNsvRGCSyfysy~A~C~FLq~nnLLSIiRA 285 (517)
T KOG0375|consen 206 GLSPEIHTLDDIRKLDRFKEPPAFGPMCDLLWSDPLEDFGNEKTSEHFTHNSVRGCSYFYSYPAVCEFLQNNNLLSIIRA 285 (517)
T ss_pred CCCcccccHHHHHhhhhccCCCccCcchhhhccChhhhccccccccccccCccccccceechHHHHHHHHhCCchhhhhh
Confidence 9999999999999999999999999999999999974 12343 468999999999999999999999999999
Q ss_pred cccccCCceeecCC------eeEEEEeCCCCCccCCCcEEEEEEcCCCeeEEEEEecCCCCC
Q psy13699 239 HQLVMEGYKWHFNE------TVLTVWSAPNYCYRCGNVAAILELNENLQREFTIFEAAPQES 294 (308)
Q Consensus 239 H~~~~~G~~~~~~~------~~iTifSa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~~~~~ 294 (308)
|+.+.-||+...+. .+|||||||||.+.++|+||||+...+ .+.++||.++|+-+
T Consensus 286 HEAQDaGYRMYrksqttGFPSLiTiFSAPNYLDvYnNKAAvLKYEnN-VMNIRQFncSPHPY 346 (517)
T KOG0375|consen 286 HEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENN-VMNIRQFNCSPHPY 346 (517)
T ss_pred hhhhhhhhhhhhcccccCCchheeeecCCchhhhhccHHHHhhhhcc-cceeeccCCCCCCc
Confidence 99999999865544 489999999999999999999998755 88999999998654
No 17
>KOG0377|consensus
Probab=100.00 E-value=4.3e-57 Score=420.31 Aligned_cols=285 Identities=35% Similarity=0.623 Sum_probs=257.0
Q ss_pred HHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHhhCCCceeec----CCcceeccCCCCHHHHHHHHHhcCCCCC-CcEEe
Q psy13699 6 QDLDRQIEQLKRCDPIKESEVKALCAKAREILVEESNVQRID----SPVTVCGDIHGQFYDLKELFKVGGDVPE-TNYLF 80 (308)
Q Consensus 6 ~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~il~~ep~l~~~~----~~i~viGDIHG~~~~L~~ll~~~~~~~~-~~~vf 80 (308)
.+++.+|+.++..+.+++..++.++.+|+++|++.|++-+++ ..+.|+||+||.++||.-+|-+.|.|.. ..|||
T Consensus 119 ~~i~~lieaFk~kq~LH~kYVl~iL~EakK~lkqmPnis~isTs~S~qVTiCGDLHGklDDL~~I~yKNGlPS~~npYvF 198 (631)
T KOG0377|consen 119 NHIDLLIEAFKKKQRLHPKYVLLILREAKKSLKQMPNISRISTSVSQQVTICGDLHGKLDDLLVILYKNGLPSSSNPYVF 198 (631)
T ss_pred hHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHhCCCCCccccccccceEEeccccccccceEEEEecCCCCCCCCCeee
Confidence 379999999999999999999999999999999999998875 5699999999999999999988887754 56999
Q ss_pred ccCeecCCCCcHHHHHHHHHhhhhCCCcEEEECCCcchhhhHhhhCChHHHHHHhCC--chhhhhhhHHhhccccceeEe
Q psy13699 81 MGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGS--ITVWRYCTEIFDYLSLSAIID 158 (308)
Q Consensus 81 LGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~--~~~~~~~~~~~~~LPl~~~i~ 158 (308)
.||+||||.+|+|||..|+++-+.||..+++-|||||..++|..|||.+|...||.. ..+.+.+.++|+|||++.+++
T Consensus 199 NGDFVDRGk~siEvLmiL~a~~lv~P~~~~LNRGNHED~mmNlRYGF~kEv~~KYk~~~k~Ilr~leevy~WLPi~tiid 278 (631)
T KOG0377|consen 199 NGDFVDRGKRSIEVLMILFALYLVYPNAVHLNRGNHEDHMMNLRYGFIKEVESKYKRHGKRILRFLEEVYRWLPIGTIID 278 (631)
T ss_pred cCchhhccccchhhHHHHHHHHhcCchhhhccCCchHHHHHHHHHhHHHHHHHHhhhcccHHHHHHHHHHHhcchhhhcc
Confidence 999999999999999999999999999999999999999999999999999999964 578889999999999999999
Q ss_pred CeEEEEcCCCCCCCCCHHHHHhhcccCC-----CCC-----------------CCcccccccCCCCCCCCCcc-CCCCCe
Q psy13699 159 GRIFCVHGGLSPSIQTLDQIRTIDRKQE-----VPH-----------------DGPMCDLLWSDPEDTQGWGV-SPRGAG 215 (308)
Q Consensus 159 ~~~l~vHgGi~p~~~~~~~i~~i~r~~~-----~~~-----------------~~~~~dllWsdP~~~~~~~~-~~rg~g 215 (308)
.++|.||||+|. .++++-+.+|+|... .|- .....|++||||....|+.+ ..||.|
T Consensus 279 ~~ilvvHGGiSd-~Tdl~ll~kIeR~k~~Svlrpp~ek~~d~e~~s~~vg~dEW~Qi~DImWSDP~~~~GC~pNt~RGgG 357 (631)
T KOG0377|consen 279 SRILVVHGGISD-STDLDLLDKIERGKYVSVLRPPTEKGRDGEKLSKAVGVDEWQQIFDIMWSDPQATMGCVPNTLRGGG 357 (631)
T ss_pred cceEEEecCccc-chhHHHHhhhhccceeEEecCCcccCccCCchhhhcChHHHHHHHHHHhcCcccccCCCcccccCCc
Confidence 999999999975 456777777766421 111 12457999999998666555 579999
Q ss_pred eEeChhHHHhhhhhcCceEEEeecccccCCceeecCCeeEEEEeCCCCCccCCCcEEEEEEcCCCeeEEEEEecCC
Q psy13699 216 YLFGSDVVASFNAANNIDMICRAHQLVMEGYKWHFNETVLTVWSAPNYCYRCGNVAAILELNENLQREFTIFEAAP 291 (308)
Q Consensus 216 ~~fg~~~~~~fl~~~~l~~iirgH~~~~~G~~~~~~~~~iTifSa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~~ 291 (308)
++||+|++.+||++++++++||+|||.++||++.++++|+|||||+||.....|+||.+++.......|+||.+..
T Consensus 358 ~yFGpDvT~~~Lqk~~l~~liRSHECKpeGyEf~Hd~kvlTiFSASNYYe~GSNrGAYikl~~~~~PhfvQY~a~k 433 (631)
T KOG0377|consen 358 CYFGPDVTDNFLQKHRLSYLIRSHECKPEGYEFCHDNKVLTIFSASNYYEIGSNRGAYIKLGNQLTPHFVQYQAAK 433 (631)
T ss_pred ceeCchHHHHHHHHhCceeeeeecccCCCcceeeeCCeEEEEEeccchheecCCCceEEEeCCCCCchHHHHHhhh
Confidence 9999999999999999999999999999999999999999999999999888999999999999999999999764
No 18
>KOG0376|consensus
Probab=100.00 E-value=3e-49 Score=374.92 Aligned_cols=285 Identities=40% Similarity=0.742 Sum_probs=262.2
Q ss_pred HHHHHHHHhhCCCCCHHHHHHHHHHHHHHHhhCCCceeec----CCcceeccCCCCHHHHHHHHHhcCCCC-CCcEEecc
Q psy13699 8 LDRQIEQLKRCDPIKESEVKALCAKAREILVEESNVQRID----SPVTVCGDIHGQFYDLKELFKVGGDVP-ETNYLFMG 82 (308)
Q Consensus 8 ~~~~i~~~~~~~~~~~~~~~~l~~~~~~il~~ep~l~~~~----~~i~viGDIHG~~~~L~~ll~~~~~~~-~~~~vfLG 82 (308)
+..+.+.......++...+..|+..+..+++++|++++++ ..+.++||+||++.++.++++..|.++ ...++|.|
T Consensus 170 vk~~~~~~~~~~~L~~k~a~~i~~~~~~~~~~l~~~ve~~~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~~ylfng 249 (476)
T KOG0376|consen 170 VKTLMEVFKNQKKLPKKYAYSILDLAKTILRKLPSLVEISVPGDVKISVCGDTHGQFYDLLNIFELNGLPSETNPYLFNG 249 (476)
T ss_pred HHHHHHhhhcccccccccceeeHHHHhhHHhcCCcceEeecCCCceEEecCCccccccchhhhHhhcCCCCCcccccccC
Confidence 3444455566667888899999999999999999999886 458999999999999999999988765 45799999
Q ss_pred CeecCCCCcHHHHHHHHHhhhhCCCcEEEECCCcchhhhHhhhCChHHHHHHhCCchhhhhhhHHhhccccceeEeCeEE
Q psy13699 83 DFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSITVWRYCTEIFDYLSLSAIIDGRIF 162 (308)
Q Consensus 83 D~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~LPl~~~i~~~~l 162 (308)
|++|||..|.|+...++..++.+|++++++|||||...++..|||..++..+|. ...+..+.+.|.+||++..++++++
T Consensus 250 dfv~rgs~s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~~kyt-e~~~~~f~~~f~~LPl~~~i~~~~~ 328 (476)
T KOG0376|consen 250 DFVDRGSWSVEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVKAKYT-EEMFNLFSEVFIWLPLAHLINNKVL 328 (476)
T ss_pred ceeeecccceeeeeeehhhcccCCcceeeccCCccchHHHHHhCCCcchhhhhH-HHHHHhhhhhhccccchhhhcCceE
Confidence 999999999999999999999999999999999999999999999999999994 5566667799999999999999999
Q ss_pred EEcCCCC-CCCCCHHHHHhhcccCCCCCCCcccccccCCCCCCCCCccCCCCCeeEeChhHHHhhhhhcCceEEEeeccc
Q psy13699 163 CVHGGLS-PSIQTLDQIRTIDRKQEVPHDGPMCDLLWSDPEDTQGWGVSPRGAGYLFGSDVVASFNAANNIDMICRAHQL 241 (308)
Q Consensus 163 ~vHgGi~-p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdP~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~l~~iirgH~~ 241 (308)
.+|||+. |.-.+++++++|.|+...|+++..++++||||....+..++.||.|..||.+++.+||+.++++.|||||+.
T Consensus 329 ~~hgglf~~~~v~l~d~r~i~r~~~~~~~~~~~~~lws~pq~~~g~s~S~r~~g~~fG~d~t~~f~~~n~l~~i~rshe~ 408 (476)
T KOG0376|consen 329 VMHGGLFSPDGVTLEDFRNIDRFEQPPEEGLMCELLWSDPQPANGRSPSKRGVGLQFGPDVTERFLQDNNLDKIIRSHEV 408 (476)
T ss_pred EEecCcCCCCCccHHHHHhhhhccCCcccccccccccCCCccccCCCccccCceeeeCCCchhhHHhhcchHHHhhcccc
Confidence 9999985 455779999999999888899999999999999899999999999999999999999999999999999999
Q ss_pred ccCCceeecCCeeEEEEeCCCCCccCCCcEEEEEEc-CCCeeEEEEEecCCCC
Q psy13699 242 VMEGYKWHFNETVLTVWSAPNYCYRCGNVAAILELN-ENLQREFTIFEAAPQE 293 (308)
Q Consensus 242 ~~~G~~~~~~~~~iTifSa~~y~~~~~n~~avl~i~-~~~~~~~~~~~~~~~~ 293 (308)
...||+..++|+|+||||||+||...+|.||++.++ ++.+..+.+|++.|+-
T Consensus 409 ~d~gy~~eh~g~l~tvfsapnycd~~~n~ga~i~~~~~~~~p~~~~~e~vp~~ 461 (476)
T KOG0376|consen 409 KDEGYEVEHSGKLITVFSAPNYCDQMGNKGAFIHLEPDDLTPNFYTFEAVPHP 461 (476)
T ss_pred CCCceeeecCCcEEEEecCcchhhhcCCcceEEEecCCCCccceeecccCCCC
Confidence 999999999999999999999999999999999999 7799999999999844
No 19
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=100.00 E-value=4.3e-36 Score=267.47 Aligned_cols=214 Identities=45% Similarity=0.729 Sum_probs=176.2
Q ss_pred ceeccCCCCHHHHHHHHHhcCCCCCCcEEeccCeecCCCCcHHHHHHHHHhhhhCCCcEEEECCCcchhhhHhhhCChHH
Q psy13699 51 TVCGDIHGQFYDLKELFKVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDE 130 (308)
Q Consensus 51 ~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e 130 (308)
+|||||||++++|.++++..+..+.+++||||||||||+.+.+++.++.+++.. |.++++|+||||.+.++...++..+
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~~~~d~li~lGD~vdrg~~~~~~l~~l~~~~~~-~~~~~~l~GNHe~~~~~~~~~~~~~ 79 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGFPPNDKLIFLGDYVDRGPDSVEVIDLLLALKIL-PDNVILLRGNHEDMLLNFLYGFYDE 79 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCCCCCCEEEEECCEeCCCCCcHHHHHHHHHhcCC-CCcEEEEccCchhhhhhhhcCCcch
Confidence 589999999999999999988888999999999999999999999999999877 7899999999999988766655433
Q ss_pred H--------HHHhCCchhhhhhhHHhhccccceeEeC-eEEEEcCCCCCCCCCHHHHHhhcccCCCCCCCcccccccCCC
Q psy13699 131 C--------LRKYGSITVWRYCTEIFDYLSLSAIIDG-RIFCVHGGLSPSIQTLDQIRTIDRKQEVPHDGPMCDLLWSDP 201 (308)
Q Consensus 131 ~--------~~~~~~~~~~~~~~~~~~~LPl~~~i~~-~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdP 201 (308)
. ...+....++....+++..||++..++. +++|||||++|.....++.. ..+.+....+++|++|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vHag~~~~~~~~~~~~------~~~~~~~~~~~lw~r~ 153 (225)
T cd00144 80 DEWIGGTLRLLKKLGEDLWEEFNDVFFYLPLAALIETKKVLCVHGGLSPGLPLEEQIK------EEPEDQLPEDLLWSDP 153 (225)
T ss_pred hhccchhHHHHHhhCHHHHHHHHHHHHhCcHheEeCCCeEEEEeCCCCCccchHHhhh------cCcccccceeeeecCC
Confidence 2 1233345677888899999999998876 99999999999987655544 2344556789999998
Q ss_pred CCCCCC-ccCCCCCeeEeChhHHHhhhhhcCceEEEeecccccCCceeecCCeeEEEEeCCCCCccCCCcEEEEE
Q psy13699 202 EDTQGW-GVSPRGAGYLFGSDVVASFNAANNIDMICRAHQLVMEGYKWHFNETVLTVWSAPNYCYRCGNVAAILE 275 (308)
Q Consensus 202 ~~~~~~-~~~~rg~g~~fg~~~~~~fl~~~~l~~iirgH~~~~~G~~~~~~~~~iTifSa~~y~~~~~n~~avl~ 275 (308)
.....+ ..+.++. |+++...|+..++.+.|||||+++..|+.....++++||+|++.|++..+|.++++.
T Consensus 154 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ii~GHt~~~~~~~~~~~~~~i~IDtg~~~~~~~~~~l~~~~ 224 (225)
T cd00144 154 LELPGGFGSSRRGG----GPDAVEWFLKKNGLKLIVRGHTPVEEGYEFGHDGNLITIDSGCNYCGGGGNKLAALV 224 (225)
T ss_pred CCCCCCCcCCCCCC----CHHHHHHHHHHCCCeEEEEcCccccCccEEcCCCCEEEEecCCcccCCCCccEEEEe
Confidence 753322 2334444 999999999999999999999999998766678899999999999877777777664
No 20
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=99.95 E-value=1.2e-26 Score=210.31 Aligned_cols=123 Identities=21% Similarity=0.378 Sum_probs=97.9
Q ss_pred CCcceeccCCCCHHHHHHHHHhcCC---------CCCCcEEeccCeecCCCCcHHHHHHHHHhhhhCCCcEEEECCCcch
Q psy13699 48 SPVTVCGDIHGQFYDLKELFKVGGD---------VPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHES 118 (308)
Q Consensus 48 ~~i~viGDIHG~~~~L~~ll~~~~~---------~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~ 118 (308)
|+++||||||||++.|.++|++.+. +..+++|||||||||||+|.+|+++++++. .+.++++||||||.
T Consensus 1 ~~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~~vl~~~~~~~--~~~~~~~l~GNHE~ 78 (245)
T PRK13625 1 MKYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSLRMIEIVWELV--EKKAAYYVPGNHCN 78 (245)
T ss_pred CceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcChHHHHHHHHHHh--hCCCEEEEeCccHH
Confidence 5789999999999999999998764 356899999999999999999999999885 34589999999999
Q ss_pred hhhHhhhCC-------hHHHHHHhCC------chhhhhhhHHhhccccceeE-eCeEEEEcCCCCCCC
Q psy13699 119 RQITQVYGF-------YDECLRKYGS------ITVWRYCTEIFDYLSLSAII-DGRIFCVHGGLSPSI 172 (308)
Q Consensus 119 ~~~~~~~gf-------~~e~~~~~~~------~~~~~~~~~~~~~LPl~~~i-~~~~l~vHgGi~p~~ 172 (308)
++++...+- ..+....|.. ..+.+.+.++++.+|++..+ .++++|||||++|..
T Consensus 79 ~~l~~~~~~~~~~~~gg~~tl~~~~~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~~~~vHAG~~~~~ 146 (245)
T PRK13625 79 KLYRFFLGRNVTIAHGLETTVAEYEALPSHKQNMIKEKFITLYEQAPLYHILDEGRLVVAHAGIRQDY 146 (245)
T ss_pred HHHHHHhCCCccccchhHhHHHHHhccChhhHHHHHHHHHHHHHhCCceEEEeCCCEEEEECCCChHh
Confidence 887654321 1223333321 23567788999999997766 467999999998864
No 21
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=99.94 E-value=6.5e-27 Score=213.50 Aligned_cols=226 Identities=17% Similarity=0.248 Sum_probs=158.4
Q ss_pred CCcceeccCCCCHHHHHHHHHhcCC-CCCCcEEeccCeecCCCCcHHHHHHHHHhhhhCCCcEEEECCCcchhhhHhhhC
Q psy13699 48 SPVTVCGDIHGQFYDLKELFKVGGD-VPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYG 126 (308)
Q Consensus 48 ~~i~viGDIHG~~~~L~~ll~~~~~-~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~g 126 (308)
|+++||||||||+++|.++|++... ++.++++|+||+|||||+|++|+.++.++. +++++|+||||.++++..+|
T Consensus 1 m~~YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~slevL~~l~~l~----~~~~~VlGNHD~~lL~~~~g 76 (279)
T TIGR00668 1 MATYLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVARGPGSLEVLRYVKSLG----DAVRLVLGNHDLHLLAVFAG 76 (279)
T ss_pred CcEEEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccCCCCCHHHHHHHHHhcC----CCeEEEEChhHHHHHHHhcC
Confidence 5789999999999999999998874 567899999999999999999999999876 46889999999999987777
Q ss_pred ChH----HHHHHhCCchhhhhhhHHhhccccceeE-eCeEEEEcCCCCCCCCCHHHHH----hhcccCCCCCCCcccccc
Q psy13699 127 FYD----ECLRKYGSITVWRYCTEIFDYLSLSAII-DGRIFCVHGGLSPSIQTLDQIR----TIDRKQEVPHDGPMCDLL 197 (308)
Q Consensus 127 f~~----e~~~~~~~~~~~~~~~~~~~~LPl~~~i-~~~~l~vHgGi~p~~~~~~~i~----~i~r~~~~~~~~~~~dll 197 (308)
+.. +....+-.....+...++++.+|+.... +.++++||||++|.+. +++.. +++.....+....+..-+
T Consensus 77 ~~~~~~~d~l~~~l~a~~~~ell~wLr~lPl~i~~~~~~~~lVHAGi~P~w~-l~~a~~~a~eve~~L~~~~~~~fl~~m 155 (279)
T TIGR00668 77 ISRNKPKDRLDPLLEAPDADELLNWLRRQPLLQHDEEKKLVMAHAGITPQWD-LQTAKECARDVEAVLSSDSYPFFLDAM 155 (279)
T ss_pred CCccCchHHHHHHHHccCHHHHHHHHHcCCcEEEeCCCCEEEEecCCCCCCc-HHHHHHHHHHHHHHHcCCCHHHHHHHh
Confidence 521 1222222345667789999999997654 3469999999999984 33322 333333333322233334
Q ss_pred cCCCCCCCCCccCCCCCe---eEeChhHHHhhhhhcC-ceEEEeec-ccccCCceeecCC--e-------eEEEEeCC-C
Q psy13699 198 WSDPEDTQGWGVSPRGAG---YLFGSDVVASFNAANN-IDMICRAH-QLVMEGYKWHFNE--T-------VLTVWSAP-N 262 (308)
Q Consensus 198 WsdP~~~~~~~~~~rg~g---~~fg~~~~~~fl~~~~-l~~iirgH-~~~~~G~~~~~~~--~-------~iTifSa~-~ 262 (308)
+.+ ....|..+..|.. ++.+.-...+||...| +++-..+. +.++.|+.++|.- + ++.=|||. +
T Consensus 156 ygn--~p~~W~~~l~g~~r~r~i~n~~TRmR~c~~~g~ld~~~k~~~~~~p~~~~PWf~~~~~~~~~~~ivfGHWaaL~g 233 (279)
T TIGR00668 156 YGD--MPNRWSPELQGLARLRFIINAFTRMRFCFPNGQLDMYSKESPEDAPAPLKPWFAIPGPVYEEYSIAFGHWASLEG 233 (279)
T ss_pred hCC--CCccCCCCCchHHHHHHHHHHHhhheeeCCCCCCcccccCCcccCCCCCCCcccCCCccCCCCcEEEeehhhccC
Confidence 433 2245776666644 4466667788888874 77777775 4568899988832 1 22338887 4
Q ss_pred CCcc-----------CCCcEEEEEEcCCC
Q psy13699 263 YCYR-----------CGNVAAILELNENL 280 (308)
Q Consensus 263 y~~~-----------~~n~~avl~i~~~~ 280 (308)
+... -+++.+.+++++..
T Consensus 234 ~~~~~~~~~lDtGCvWGg~Lta~~l~~~~ 262 (279)
T TIGR00668 234 EGTPEGIYALDTGCCWGGRLTCLRWEDKQ 262 (279)
T ss_pred CCCCCCeEEcccccccCcceEEEEecCCC
Confidence 4432 16677778887653
No 22
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=99.94 E-value=1.5e-26 Score=210.38 Aligned_cols=193 Identities=20% Similarity=0.304 Sum_probs=138.0
Q ss_pred cceeccCCCCHHHHHHHHHhcCC-CCCCcEEeccCeecCCCCcHHHHHHHHHhhhhCCCcEEEECCCcchhhhHhhhCCh
Q psy13699 50 VTVCGDIHGQFYDLKELFKVGGD-VPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFY 128 (308)
Q Consensus 50 i~viGDIHG~~~~L~~ll~~~~~-~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~ 128 (308)
++||||||||+++|+++|++.+. ++.+++||+||||||||+|+||++++++++ .++++|+||||.++++..++..
T Consensus 1 ~yvIGDIHG~~~~L~~LL~~i~~~~~~D~Li~lGDlVdRGp~s~evl~~l~~l~----~~v~~VlGNHD~~ll~~~~g~~ 76 (257)
T cd07422 1 TYAIGDIQGCYDELQRLLEKINFDPAKDRLWLVGDLVNRGPDSLETLRFVKSLG----DSAKTVLGNHDLHLLAVAAGIK 76 (257)
T ss_pred CEEEECCCCCHHHHHHHHHhcCCCCCCCEEEEecCcCCCCcCHHHHHHHHHhcC----CCeEEEcCCchHHHHHHhcCcc
Confidence 58999999999999999998875 468999999999999999999999999986 4799999999999887666643
Q ss_pred H----HHHHHhCCchhhhhhhHHhhccccceeEeC-eEEEEcCCCCCCCCCHHHH----HhhcccCCCCCCC-ccccccc
Q psy13699 129 D----ECLRKYGSITVWRYCTEIFDYLSLSAIIDG-RIFCVHGGLSPSIQTLDQI----RTIDRKQEVPHDG-PMCDLLW 198 (308)
Q Consensus 129 ~----e~~~~~~~~~~~~~~~~~~~~LPl~~~i~~-~~l~vHgGi~p~~~~~~~i----~~i~r~~~~~~~~-~~~dllW 198 (308)
. +...++-.....+...++++.+|+...+++ ++++||||++|.+.. ++. ++++.....+... ....+.|
T Consensus 77 ~~~~~~t~~~~l~~~~~~~~~~wLr~lPl~~~~~~~~~l~vHAGi~p~w~~-~~~~~~a~eve~~l~~~~~~~~~~~my~ 155 (257)
T cd07422 77 KPKKKDTLDDILNAPDRDELLDWLRHQPLLHRDPELGILMVHAGIPPQWSI-EQALKLAREVEAALRGPNYREFLKNMYG 155 (257)
T ss_pred ccccHhHHHHHHhccchHHHHHHHHhCCCEEEECCccEEEEccCCCCCCCH-HHHHHHHHHHHHHhcCCcHHHHHHHhhC
Confidence 1 111222123344677899999999777654 899999999999843 332 2233323233332 2334444
Q ss_pred CCCCCCCCCccCCCCCe---eEeChhHHHhhhhhcC-ceEEEeec-ccccCCceeec
Q psy13699 199 SDPEDTQGWGVSPRGAG---YLFGSDVVASFNAANN-IDMICRAH-QLVMEGYKWHF 250 (308)
Q Consensus 199 sdP~~~~~~~~~~rg~g---~~fg~~~~~~fl~~~~-l~~iirgH-~~~~~G~~~~~ 250 (308)
+.| ..|..+..|.. ++.+.-..++||...| +++-..+. +..+.|+.++|
T Consensus 156 ~~p---~~W~~~l~g~~r~r~~~n~~trmR~~~~~g~l~~~~k~~~~~~~~~~~pWf 209 (257)
T cd07422 156 NEP---DRWSDDLTGIDRLRYIVNAFTRMRFCTPDGRLDFSSKGAPEDAPKGLKPWF 209 (257)
T ss_pred CCC---cccCcccCccHHHHHHHHHhhceeeecCCCCEeecccCCcccCCCCCCCce
Confidence 444 36777766664 3355666677887775 66666665 45678898888
No 23
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=99.94 E-value=9.1e-26 Score=207.27 Aligned_cols=123 Identities=20% Similarity=0.278 Sum_probs=99.3
Q ss_pred CCcceeccCCCCHHHHHHHHHhcCC-CCCCcEEeccCeecCCCCcHHHHHHHHHhhhhCCCcEEEECCCcchhhhHhhhC
Q psy13699 48 SPVTVCGDIHGQFYDLKELFKVGGD-VPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYG 126 (308)
Q Consensus 48 ~~i~viGDIHG~~~~L~~ll~~~~~-~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~g 126 (308)
|+++||||||||++.|.+++++.+. +..+++|||||+|||||+|.+|++++.++. .++++|+||||.+++...+|
T Consensus 1 M~~~vIGDIHG~~~~l~~ll~~~~~~~~~D~li~lGDlVdrGp~s~~vl~~l~~l~----~~~~~VlGNHD~~ll~~~~g 76 (275)
T PRK00166 1 MATYAIGDIQGCYDELQRLLEKIDFDPAKDTLWLVGDLVNRGPDSLEVLRFVKSLG----DSAVTVLGNHDLHLLAVAAG 76 (275)
T ss_pred CcEEEEEccCCCHHHHHHHHHhcCCCCCCCEEEEeCCccCCCcCHHHHHHHHHhcC----CCeEEEecChhHHHHHhhcC
Confidence 6799999999999999999998764 567899999999999999999999999874 46999999999998876666
Q ss_pred ChH----HHHHHhCCchhhhhhhHHhhccccceeE-eCeEEEEcCCCCCCCCC
Q psy13699 127 FYD----ECLRKYGSITVWRYCTEIFDYLSLSAII-DGRIFCVHGGLSPSIQT 174 (308)
Q Consensus 127 f~~----e~~~~~~~~~~~~~~~~~~~~LPl~~~i-~~~~l~vHgGi~p~~~~ 174 (308)
... .....+-.....+...++++.+|+...+ ++++++||||++|.+..
T Consensus 77 ~~~~~~~~~l~~~l~~~~~~~~~~~L~~lPl~~~~~~~~~l~vHAGi~p~~~~ 129 (275)
T PRK00166 77 IKRNKKKDTLDPILEAPDRDELLDWLRHQPLLHVDEELGLVMVHAGIPPQWDL 129 (275)
T ss_pred CccccchhHHHHHHccccHHHHHHHHHCCCcEEEECCCCEEEEccCCCCCCCH
Confidence 431 1222222233456678899999996655 67899999999998843
No 24
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=99.94 E-value=4e-26 Score=202.08 Aligned_cols=175 Identities=19% Similarity=0.243 Sum_probs=127.3
Q ss_pred ceeccCCCCHHHHHHHHHhcCC--------CCCCcEEeccCeecCCCCcHHHHHHHHHhhhh---CCCcEEEECCCcchh
Q psy13699 51 TVCGDIHGQFYDLKELFKVGGD--------VPETNYLFMGDFVDRGFYSVETFLLLLALKVR---YPDRITLIRGNHESR 119 (308)
Q Consensus 51 ~viGDIHG~~~~L~~ll~~~~~--------~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~---~p~~v~~lrGNHE~~ 119 (308)
+|||||||++++|.++|+..+. .+.+.+|++||+||||+++.+|++++++++.. .+.++++|+||||.+
T Consensus 1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~~ 80 (208)
T cd07425 1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKAGGKVHFLLGNHELM 80 (208)
T ss_pred CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcHH
Confidence 5899999999999999988763 46789999999999999999999999999754 346799999999999
Q ss_pred hhHhhhCCh--HHHHHHhC----Cchh---hhhhhHHhhccccceeEeCeEEEEcCCCCCCCCCHHHHHhhcccCCCCCC
Q psy13699 120 QITQVYGFY--DECLRKYG----SITV---WRYCTEIFDYLSLSAIIDGRIFCVHGGLSPSIQTLDQIRTIDRKQEVPHD 190 (308)
Q Consensus 120 ~~~~~~gf~--~e~~~~~~----~~~~---~~~~~~~~~~LPl~~~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~ 190 (308)
.++..+.+. .+...... .... ...+.++++.+|+...++ ++++||||++|
T Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lP~~~~~~-~~~fvHag~~~-------------------- 139 (208)
T cd07425 81 NLCGDFRYVHPKYFNEFGGLAMRRRELFSPGGELGRWLRSKPVIVKVN-DTLFVHGGLGP-------------------- 139 (208)
T ss_pred HHcchhccCChhHHHHHHhhhhhHHHhcCCccHHHHHHHhCCeEEEEC-CEEEEeCCcHH--------------------
Confidence 886443322 11111100 1112 234578899999977665 68889999833
Q ss_pred CcccccccCCCCCCCCCccCCCCCeeEeChhHHHhhhhhcCceEEEeecccccCCceeecCCeeEEEEe
Q psy13699 191 GPMCDLLWSDPEDTQGWGVSPRGAGYLFGSDVVASFNAANNIDMICRAHQLVMEGYKWHFNETVLTVWS 259 (308)
Q Consensus 191 ~~~~dllWsdP~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~l~~iirgH~~~~~G~~~~~~~~~iTifS 259 (308)
+|++.- ....... --+...+.++++.++.+++|+||++++.|....+++++++|-+
T Consensus 140 ------~w~r~y----~~~~~~~---~~~~~~~~~~l~~~~~~~iv~GHTh~~~~~~~~~~g~~i~ID~ 195 (208)
T cd07425 140 ------LWYRGY----SKETSDK---ECAAAHLDKVLERLGAKRMVVGHTPQEGGIVTFCGGKVIRIDV 195 (208)
T ss_pred ------HHhhHh----hhhhhhc---cchHHHHHHHHHHcCCCeEEEcCeeeecCceEEECCEEEEEeC
Confidence 343310 0000000 0122567888999999999999999988876688999999965
No 25
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=99.93 E-value=2.4e-25 Score=199.04 Aligned_cols=116 Identities=26% Similarity=0.287 Sum_probs=90.7
Q ss_pred ceeccCCCCHHHHHHHHHhcCCC--------CCCcEEeccCeecCCCCcHHHHHHHHHhhhhCCCcEEEECCCcchhhhH
Q psy13699 51 TVCGDIHGQFYDLKELFKVGGDV--------PETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQIT 122 (308)
Q Consensus 51 ~viGDIHG~~~~L~~ll~~~~~~--------~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~ 122 (308)
+||||||||++.|.++|+..+.. +.+++|||||||||||+|.+|+++++++... .++++|+||||.+++.
T Consensus 2 ~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~~vl~~l~~l~~~--~~~~~l~GNHE~~ll~ 79 (222)
T cd07413 2 DFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIRELLEIVKSMVDA--GHALAVMGNHEFNAIA 79 (222)
T ss_pred EEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCHHHHHHHHHHhhcC--CCEEEEEccCcHHHHH
Confidence 69999999999999999887643 5679999999999999999999999998643 4799999999999875
Q ss_pred hhhCCh-----------------HHHHHHhC-CchhhhhhhHHhhccccceeEeCeEEEEcCCCC
Q psy13699 123 QVYGFY-----------------DECLRKYG-SITVWRYCTEIFDYLSLSAIIDGRIFCVHGGLS 169 (308)
Q Consensus 123 ~~~gf~-----------------~e~~~~~~-~~~~~~~~~~~~~~LPl~~~i~~~~l~vHgGi~ 169 (308)
...+.. .+..+.++ ..+..+...++++.||+... .++++|||||+.
T Consensus 80 ~~~~~~~~~~w~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~lP~~~~-~~~~~~VHAg~~ 143 (222)
T cd07413 80 WHTKDPSGGEWLRAHSKKNLRQHQAFLEQFREHSEEHKDWLEWFKTLPLFLD-LGGVRVVHACWD 143 (222)
T ss_pred hhhCCcccchhhhcCCCcccccHHHHHHHHhccchhHHHHHHHHhcCCcEEE-ECCEEEEECCcC
Confidence 432210 12223332 23455778899999999654 467999999985
No 26
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=99.93 E-value=4.3e-25 Score=198.87 Aligned_cols=123 Identities=25% Similarity=0.472 Sum_probs=96.9
Q ss_pred CCcceeccCCCCHHHHHHHHHhcCCC----------CCCcEEeccCeecCCCCcHHHHHHHHHhhhhCCCcEEEECCCcc
Q psy13699 48 SPVTVCGDIHGQFYDLKELFKVGGDV----------PETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHE 117 (308)
Q Consensus 48 ~~i~viGDIHG~~~~L~~ll~~~~~~----------~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE 117 (308)
||+.||||||||+.+|.++|+..+.. +.+++|||||||||||+|.+|+++|++++.. .++++||||||
T Consensus 1 ~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s~evl~~l~~l~~~--~~~~~v~GNHE 78 (234)
T cd07423 1 GPFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDSPEVLRLVMSMVAA--GAALCVPGNHD 78 (234)
T ss_pred CCeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCCHHHHHHHHHHHhhC--CcEEEEECCcH
Confidence 68999999999999999999987543 3579999999999999999999999998643 46999999999
Q ss_pred hhhhHhhhCCh-------HHHHHHhC--CchhhhhhhHHhhccccceeEe-CeEEEEcCCCCCCC
Q psy13699 118 SRQITQVYGFY-------DECLRKYG--SITVWRYCTEIFDYLSLSAIID-GRIFCVHGGLSPSI 172 (308)
Q Consensus 118 ~~~~~~~~gf~-------~e~~~~~~--~~~~~~~~~~~~~~LPl~~~i~-~~~l~vHgGi~p~~ 172 (308)
.++++...+.. .+....+. ...+.+...++++.||+...++ ++++|||||+++.+
T Consensus 79 ~~l~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHag~~~~~ 143 (234)
T cd07423 79 NKLYRKLQGRNVKITHGLEETVAQLEAESEEFKEEVIEFYESLPSHLVLDEGKLVVAHAGIKEEM 143 (234)
T ss_pred HHHHHHhcCCCccccCcccchHHHHhhccHHHHHHHHHHHHhCCcEEEeCCCcEEEEeCCCChHh
Confidence 98876533210 12223332 2346677889999999977664 57999999988754
No 27
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=99.93 E-value=8.2e-25 Score=200.09 Aligned_cols=147 Identities=23% Similarity=0.336 Sum_probs=108.8
Q ss_pred CcceeccCCCCHHHHHHHHHhcCC------CCCCcEEeccCeecCCCCcHHHHHHHHHhhhhCCC-cEEEECCCcchhhh
Q psy13699 49 PVTVCGDIHGQFYDLKELFKVGGD------VPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPD-RITLIRGNHESRQI 121 (308)
Q Consensus 49 ~i~viGDIHG~~~~L~~ll~~~~~------~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~-~v~~lrGNHE~~~~ 121 (308)
++++||||||+++.|.++++.... ...+.+|||||||||||+|.+|+++|.+++..+|. ++++|+||||.+++
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~~~~~~vv~LrGNHE~~~l 82 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPKQRHVFLCGNHDFAFA 82 (304)
T ss_pred eEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhcccccceEEEecCChHHHH
Confidence 689999999999999999975431 23567999999999999999999999999988875 68899999998876
Q ss_pred HhhhC---------C------------------------------------------------------hHHHHHHhCC-
Q psy13699 122 TQVYG---------F------------------------------------------------------YDECLRKYGS- 137 (308)
Q Consensus 122 ~~~~g---------f------------------------------------------------------~~e~~~~~~~- 137 (308)
..... | ..+....||-
T Consensus 83 ~fL~~~p~~~d~~~f~~~w~~~~~~~e~~~~~~~~~~~~~h~~g~~W~~~~~~~~~~~~~~~~~~~~~gg~~Tl~SYGv~ 162 (304)
T cd07421 83 AFLGVLPRPSDGSEFKSTWKEYEKNEEREGWYKGEGFENMHLQGRRWAGKMKVTFNTVRGEPYKGSIYDARPTFESYGVP 162 (304)
T ss_pred hHhhcCCCccchhhhhhhhccccccccccccccccccccccccccchhhhccccccccccccccccccCcHHHHHHcCCC
Confidence 53221 0 0123344442
Q ss_pred -------chhhhhhhHHhhccccceeEeCeE-------------EEEcCCCCCCCCCHHHHHhhc-ccCCCCCCCccccc
Q psy13699 138 -------ITVWRYCTEIFDYLSLSAIIDGRI-------------FCVHGGLSPSIQTLDQIRTID-RKQEVPHDGPMCDL 196 (308)
Q Consensus 138 -------~~~~~~~~~~~~~LPl~~~i~~~~-------------l~vHgGi~p~~~~~~~i~~i~-r~~~~~~~~~~~dl 196 (308)
..+.+...++++.||..... +.+ +|||||+.|+..--+|.+.+. +....| ..++
T Consensus 163 ~~~~~l~~avP~~H~~fl~~l~~~~~~-~~~~~~~~~g~~~~~lifVHAGlrPg~pLe~Q~~~L~~~d~~~p----~~~~ 237 (304)
T cd07421 163 HGSSDLIKAVPEEHKKFLRNLVWVHEE-DDVCIETEEGLKHCKLIAVHAGLEKSNSVEEQLKLLRTKDTSIP----KIAP 237 (304)
T ss_pred cchHHHHHhCCHHHHHHHHhCCceEEe-CcccccccccccccceEEEEcccCCCCChHHhhhhhhccccccc----cccc
Confidence 13455678899999985443 344 899999999998777876644 222222 2488
Q ss_pred ccCC
Q psy13699 197 LWSD 200 (308)
Q Consensus 197 lWsd 200 (308)
+|.+
T Consensus 238 l~~R 241 (304)
T cd07421 238 LSGR 241 (304)
T ss_pred cccc
Confidence 9998
No 28
>PHA02239 putative protein phosphatase
Probab=99.92 E-value=2.6e-24 Score=193.64 Aligned_cols=137 Identities=23% Similarity=0.360 Sum_probs=100.4
Q ss_pred CCcceeccCCCCHHHHHHHHHhcCC--CCCCcEEeccCeecCCCCcHHHHHHHHHhhhhCCCcEEEECCCcchhhhHhhh
Q psy13699 48 SPVTVCGDIHGQFYDLKELFKVGGD--VPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVY 125 (308)
Q Consensus 48 ~~i~viGDIHG~~~~L~~ll~~~~~--~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~ 125 (308)
|++++||||||++..|.++++.... .+.+.+||+|||||||++|.+++..++.+.. .+.++++|+||||.++++...
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~~s~~v~~~l~~~~~-~~~~~~~l~GNHE~~~l~~~~ 79 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDRGKRSKDVVNYIFDLMS-NDDNVVTLLGNHDDEFYNIME 79 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCCCCChHHHHHHHHHHhh-cCCCeEEEECCcHHHHHHHHh
Confidence 6789999999999999999987643 2468999999999999999999999988753 345799999999998765432
Q ss_pred CCh--------------HHHHHHhCCc------------------------------hhhhhhhHHhhccccceeEeCeE
Q psy13699 126 GFY--------------DECLRKYGSI------------------------------TVWRYCTEIFDYLSLSAIIDGRI 161 (308)
Q Consensus 126 gf~--------------~e~~~~~~~~------------------------------~~~~~~~~~~~~LPl~~~i~~~~ 161 (308)
+.. .+....||.. ..+..+..+++.||+... .+++
T Consensus 80 ~~~~~~~~~~~wl~~GG~~Tl~Syg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~lp~~~~-~~~~ 158 (235)
T PHA02239 80 NVDRLSIYDIEWLSRYCIETLNSYGVSTVTLKYSSVEENLRNNYDFIKSELKKLKESDDYRKFKILMVNCRKYYK-EDKY 158 (235)
T ss_pred CchhcccchHHHHHcCCHHHHHHcCCCCccchhhHHHHHHHHhhhhhhhhhhhcccchhhHHHHHHHHhCcceEE-ECCE
Confidence 110 1223455311 122344568888998444 5679
Q ss_pred EEEcCCCCCCCCCHHHHHhhcccCCCCCCCcccccccCC
Q psy13699 162 FCVHGGLSPSIQTLDQIRTIDRKQEVPHDGPMCDLLWSD 200 (308)
Q Consensus 162 l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsd 200 (308)
+|||||+.|..+ +++ ....+++|.+
T Consensus 159 ifVHAGi~p~~~-~~~-------------q~~~~llWiR 183 (235)
T PHA02239 159 IFSHSGGVSWKP-VEE-------------QTIDQLIWSR 183 (235)
T ss_pred EEEeCCCCCCCC-hhh-------------CCHhHeEEec
Confidence 999999998754 222 1236789999
No 29
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=99.91 E-value=9.2e-24 Score=188.30 Aligned_cols=116 Identities=22% Similarity=0.236 Sum_probs=88.3
Q ss_pred CCcceeccCCCCHHHHHHHHHhcCCC-CCCcEEeccCeecCCCCcHHHHHHHHHhhhhCCCcEEEECCCcchhhhHhhhC
Q psy13699 48 SPVTVCGDIHGQFYDLKELFKVGGDV-PETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYG 126 (308)
Q Consensus 48 ~~i~viGDIHG~~~~L~~ll~~~~~~-~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~g 126 (308)
++++||||||||+++|.++|+..... ..++++||||+|||||+|.+|++++.+. ++++|+||||.++++...+
T Consensus 17 ~ri~vigDIHG~~~~L~~lL~~i~~~~~~D~li~lGDlvDrGp~s~~vl~~l~~~------~~~~v~GNHE~~~l~~~~~ 90 (218)
T PRK11439 17 RHIWLVGDIHGCFEQLMRKLRHCRFDPWRDLLISVGDLIDRGPQSLRCLQLLEEH------WVRAVRGNHEQMALDALAS 90 (218)
T ss_pred CeEEEEEcccCCHHHHHHHHHhcCCCcccCEEEEcCcccCCCcCHHHHHHHHHcC------CceEeeCchHHHHHHHHHC
Confidence 58999999999999999999988754 6789999999999999999999999652 4789999999998865322
Q ss_pred ChHH-HH-------HHhC--CchhhhhhhHHhhccccceeE---eCeEEEEcCCCC
Q psy13699 127 FYDE-CL-------RKYG--SITVWRYCTEIFDYLSLSAII---DGRIFCVHGGLS 169 (308)
Q Consensus 127 f~~e-~~-------~~~~--~~~~~~~~~~~~~~LPl~~~i---~~~~l~vHgGi~ 169 (308)
-... +. .... ....+....++++.||+...+ ++++++||||++
T Consensus 91 ~~~~~w~~~gg~~~~~l~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~vHAg~p 146 (218)
T PRK11439 91 QQMSLWLMNGGDWFIALTDNQQKQAKTLLEKCQRLPFILEVHCRTGKHVIAHADYP 146 (218)
T ss_pred CccchhhhCCChhhhhcchhhhHHHHHHHHHHhcCCcEEEeeccCCCEEEEeCCCC
Confidence 1100 00 0111 112344566889999997654 457999999984
No 30
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=99.90 E-value=7.8e-23 Score=180.81 Aligned_cols=168 Identities=23% Similarity=0.309 Sum_probs=114.3
Q ss_pred CCcceeccCCCCHHHHHHHHHhcCC-CCCCcEEeccCeecCCCCcHHHHHHHHHhhhhCCCcEEEECCCcchhhhHhhhC
Q psy13699 48 SPVTVCGDIHGQFYDLKELFKVGGD-VPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYG 126 (308)
Q Consensus 48 ~~i~viGDIHG~~~~L~~ll~~~~~-~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~g 126 (308)
+|+++||||||++.+|.++++.... +..+.++++||+||||+++.++++++.. .++++|+||||.+.+....+
T Consensus 1 ~ri~~isDiHg~~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~~~~~~~~l~~------~~~~~v~GNhe~~~~~~~~~ 74 (207)
T cd07424 1 GRDFVVGDIHGHYSLLQKALDAVGFDPARDRLISVGDLIDRGPESLACLELLLE------PWFHAVRGNHEQMAIDALRA 74 (207)
T ss_pred CCEEEEECCCCCHHHHHHHHHHcCCCCCCCEEEEeCCcccCCCCHHHHHHHHhc------CCEEEeECCChHHHHhHhhC
Confidence 4789999999999999999998765 4578999999999999999999999875 25899999999998876544
Q ss_pred C--hHHHHHHhCCc--------hhhhhhhHHhhccccceeEe---CeEEEEcCCCCCCCCCHHHHHhhcccCCCCCCCcc
Q psy13699 127 F--YDECLRKYGSI--------TVWRYCTEIFDYLSLSAIID---GRIFCVHGGLSPSIQTLDQIRTIDRKQEVPHDGPM 193 (308)
Q Consensus 127 f--~~e~~~~~~~~--------~~~~~~~~~~~~LPl~~~i~---~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~ 193 (308)
. ..+...+.+.. .+++...++++.||+...++ +++++||||+++... ..... + +.......
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~g~~~~~vHag~~~~~~-~~~~~---~--~~~~~~~~ 148 (207)
T cd07424 75 EPLDAVRWLANGGEWFLDLPDEELRRWLALKLEQLPLAIEVETEGGKVGIVHADYPSDDW-SDGVG---A--VTLRPEDI 148 (207)
T ss_pred CCcchhHHHhcCCeehhhcChHHHHHHHHHHHHhCCeEEEEEeCCCEEEEECCCCCcchh-hhhhh---c--cccCcccc
Confidence 2 22222223221 14455778999999987663 479999999865431 11100 0 11122345
Q ss_pred cccccCCCCCCCCCccCCCCCeeEeChhHHHhhhhhcCceEEEeecccccCC
Q psy13699 194 CDLLWSDPEDTQGWGVSPRGAGYLFGSDVVASFNAANNIDMICRAHQLVMEG 245 (308)
Q Consensus 194 ~dllWsdP~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~l~~iirgH~~~~~G 245 (308)
.+++|++|....... ....+.+.+|.||++.+.-
T Consensus 149 ~~~~w~~~~~~~~~~------------------~~~~~~~~iV~GHTh~~~~ 182 (207)
T cd07424 149 EELLWSRTRIQKAQT------------------QPIKGVDAVVHGHTPVKRP 182 (207)
T ss_pred eeeeeccchhhhcCc------------------cccCCCCEEEECCCCCCcc
Confidence 678898753211100 0011345689999987653
No 31
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=99.86 E-value=4.6e-21 Score=170.94 Aligned_cols=116 Identities=20% Similarity=0.174 Sum_probs=85.7
Q ss_pred CCcceeccCCCCHHHHHHHHHhcC-CCCCCcEEeccCeecCCCCcHHHHHHHHHhhhhCCCcEEEECCCcchhhhHhhhC
Q psy13699 48 SPVTVCGDIHGQFYDLKELFKVGG-DVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYG 126 (308)
Q Consensus 48 ~~i~viGDIHG~~~~L~~ll~~~~-~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~g 126 (308)
.|++||||||||+++|+++++... .+..++++|+||+|||||+|.+|++++.+ .++++||||||.+++.....
T Consensus 15 ~ri~visDiHg~~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~~~~l~~l~~------~~~~~v~GNHE~~~~~~~~~ 88 (218)
T PRK09968 15 RHIWVVGDIHGEYQLLQSRLHQLSFCPETDLLISVGDNIDRGPESLNVLRLLNQ------PWFISVKGNHEAMALDAFET 88 (218)
T ss_pred CeEEEEEeccCCHHHHHHHHHhcCCCCCCCEEEECCCCcCCCcCHHHHHHHHhh------CCcEEEECchHHHHHHHHhc
Confidence 489999999999999999998876 34678999999999999999999998864 25889999999988864321
Q ss_pred Ch-HH-------HHHHhCC--chhhhhhhHHhhccccceeE---eCeEEEEcCCCC
Q psy13699 127 FY-DE-------CLRKYGS--ITVWRYCTEIFDYLSLSAII---DGRIFCVHGGLS 169 (308)
Q Consensus 127 f~-~e-------~~~~~~~--~~~~~~~~~~~~~LPl~~~i---~~~~l~vHgGi~ 169 (308)
-. .. +..+... .........+++.||+...+ ++++++||||++
T Consensus 89 ~~~~~~~~~gg~~~~~l~~~~~~~~~~~~~~L~~LP~~~~~~~~g~~~~~vHAg~p 144 (218)
T PRK09968 89 GDGNMWLASGGDWFFDLNDSEQQEATDLLLKFHHLPHIIEITNDNIKYVIAHADYP 144 (218)
T ss_pred CChhHHHHccCHHHhcCCHHHHHHHHHHHHHHhcCCeEEEEeeCCCcEEEEeCCCC
Confidence 11 11 1111110 11223345588999997655 357899999983
No 32
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.42 E-value=1.3e-12 Score=107.47 Aligned_cols=160 Identities=21% Similarity=0.240 Sum_probs=100.5
Q ss_pred CCcceeccCCCCHHHH----HHHHHhcCCCCCCcEEeccCeecCCCCcHHHHHHH--HHhhhhCCCcEEEECCCcchhhh
Q psy13699 48 SPVTVCGDIHGQFYDL----KELFKVGGDVPETNYLFMGDFVDRGFYSVETFLLL--LALKVRYPDRITLIRGNHESRQI 121 (308)
Q Consensus 48 ~~i~viGDIHG~~~~L----~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l--~~lk~~~p~~v~~lrGNHE~~~~ 121 (308)
+|+++|||+|+..... ..+.+.....+.+.+|++||+++++..+.+..... .......+..+++++||||....
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD~~~~ 80 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFILGNHDYYSG 80 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEEE-TTSSHHH
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeeccccccccccccchhhhccchhhhhcccccccccccccccee
Confidence 4789999999999987 34444444567889999999999999887766654 34444455679999999999875
Q ss_pred HhhhCChHHHHHHh-C--------------------------------CchhhhhhhHHhhccccceeEeCeEEEEcCCC
Q psy13699 122 TQVYGFYDECLRKY-G--------------------------------SITVWRYCTEIFDYLSLSAIIDGRIFCVHGGL 168 (308)
Q Consensus 122 ~~~~gf~~e~~~~~-~--------------------------------~~~~~~~~~~~~~~LPl~~~i~~~~l~vHgGi 168 (308)
...+.......... . ...................-....++++|.++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~H~p~ 160 (200)
T PF00149_consen 81 NSFYGFYDYQFEDYYGNYNYYYSYFNNKVIFDNDNFWFNSGNNEYPDYGMEAQQEWWLWLLLLLEAKNDDPVIVFTHHPP 160 (200)
T ss_dssp HHHHHHHHHHHSSEEECSSEEECTESSEEEEEETTEEEEEHCCHTHHSEHHHHHHHHHHHHHHHHEEEESEEEEEESSSS
T ss_pred ccccccccccccccccccccccccCcceeeecccccccccccccccccccccchhcccccccccccccccceeEEEecCC
Confidence 54332221111000 0 00000111111222222233456799999998
Q ss_pred CCCCCCHHHHHhhcccCCCCCCCcccccccCCCCCCCCCccCCCCCeeEeChhHHHhhhhhcCceEEEeecccc
Q psy13699 169 SPSIQTLDQIRTIDRKQEVPHDGPMCDLLWSDPEDTQGWGVSPRGAGYLFGSDVVASFNAANNIDMICRAHQLV 242 (308)
Q Consensus 169 ~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdP~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~l~~iirgH~~~ 242 (308)
.+........ .....+...+..++++.++++++.||+..
T Consensus 161 ~~~~~~~~~~-----------------------------------~~~~~~~~~~~~~~~~~~v~~~~~GH~H~ 199 (200)
T PF00149_consen 161 YSSSSDSSSY-----------------------------------GNESKGREALEELLKKYNVDLVLSGHTHR 199 (200)
T ss_dssp STTSSSTHHH-----------------------------------SSEEEHHHHHHHHHHHTTCSEEEEESSSS
T ss_pred CCcccccccc-----------------------------------chhhccHHHHHHHHhhCCCCEEEeCceec
Confidence 7654322111 12356778899999999999999999854
No 33
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=99.29 E-value=9.5e-11 Score=98.35 Aligned_cols=59 Identities=24% Similarity=0.399 Sum_probs=48.6
Q ss_pred CcceeccCCCCHHHHHHHHHhcCCCCCCcEEeccCeecCCCCcHHHHHHHHHhhhhCCCcEEEECCCcchh
Q psy13699 49 PVTVCGDIHGQFYDLKELFKVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESR 119 (308)
Q Consensus 49 ~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 119 (308)
++.++||+||+...+.++++.... .+.++++||++++++.+. ++.. ..+++++||||..
T Consensus 1 ~i~~isD~H~~~~~~~~~~~~~~~--~d~ii~~GD~~~~~~~~~--------~~~~--~~~~~V~GNhD~~ 59 (155)
T cd00841 1 KIGVISDTHGSLELLEKALELFGD--VDLIIHAGDVLYPGPLNE--------LELK--APVIAVRGNCDGE 59 (155)
T ss_pred CEEEEecCCCCHHHHHHHHHHhcC--CCEEEECCccccccccch--------hhcC--CcEEEEeCCCCCc
Confidence 578999999999999999987654 789999999999998765 1112 3589999999974
No 34
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=99.19 E-value=9.7e-11 Score=97.61 Aligned_cols=61 Identities=25% Similarity=0.446 Sum_probs=46.6
Q ss_pred CCcceeccCCCCHHHHHHHHHhcCCCCCCcEEeccCeecCCCCcHHHHHHHHHhhhhCCCcEEEECCCcchhh
Q psy13699 48 SPVTVCGDIHGQFYDLKELFKVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQ 120 (308)
Q Consensus 48 ~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~ 120 (308)
||++++||+|++...+.++++.. ...+.++++||++|+ .++++.+... .++.++||||...
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~--~~~d~vi~~GDi~~~----~~~~~~~~~~------~~~~v~GNHD~~~ 61 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYI--NEPDFVIILGDIFDP----EEVLELLRDI------PVYVVRGNHDNWA 61 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHH--TTESEEEEES-SCSH----HHHHHHHHHH------EEEEE--CCHSTH
T ss_pred CEEEEEeCCCCChhHHHHHHHHh--cCCCEEEECCCchhH----HHHHHHHhcC------CEEEEeCCccccc
Confidence 68999999999999999999887 347899999999983 7777777555 3999999999654
No 35
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=99.18 E-value=6.4e-10 Score=93.93 Aligned_cols=62 Identities=18% Similarity=0.200 Sum_probs=49.9
Q ss_pred CCcceeccCCCCHHHHHHHHHhcCCC-CCCcEEeccCeecCCCCcHHHHHHHHHhhhhCCCcEEEECCCcch
Q psy13699 48 SPVTVCGDIHGQFYDLKELFKVGGDV-PETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHES 118 (308)
Q Consensus 48 ~~i~viGDIHG~~~~L~~ll~~~~~~-~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~ 118 (308)
|++.++||+||+..++..+++..... +.+.++++||++ +.+++..+.++. ..++.++||||.
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~-----~~~~~~~l~~~~----~~~~~V~GN~D~ 63 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLT-----SPFVLKEFEDLA----AKVIAVRGNNDG 63 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCC-----CHHHHHHHHHhC----CceEEEccCCCc
Confidence 68999999999998877776655444 679999999998 467777776553 248999999997
No 36
>PRK09453 phosphodiesterase; Provisional
Probab=99.10 E-value=1.2e-10 Score=100.78 Aligned_cols=69 Identities=22% Similarity=0.288 Sum_probs=56.8
Q ss_pred CCcceeccCCCCHHHHHHHHHhcCCCCCCcEEeccCeecCCCC--------cHHHHHHHHHhhhhCCCcEEEECCCcchh
Q psy13699 48 SPVTVCGDIHGQFYDLKELFKVGGDVPETNYLFMGDFVDRGFY--------SVETFLLLLALKVRYPDRITLIRGNHESR 119 (308)
Q Consensus 48 ~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~--------s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 119 (308)
|++.++||+||++.++.++++.....+.+.++++||++|+|++ +.++++.+.++. ..+++++||||..
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~~----~~v~~V~GNhD~~ 76 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQSGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAYA----DKIIAVRGNCDSE 76 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHhcCCCEEEEcccccccCcCCCCccccCHHHHHHHHHhcC----CceEEEccCCcch
Confidence 6899999999999999999987766678999999999999874 456777665543 3599999999975
Q ss_pred h
Q psy13699 120 Q 120 (308)
Q Consensus 120 ~ 120 (308)
.
T Consensus 77 ~ 77 (182)
T PRK09453 77 V 77 (182)
T ss_pred h
Confidence 3
No 37
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=99.08 E-value=1.4e-09 Score=97.96 Aligned_cols=155 Identities=21% Similarity=0.262 Sum_probs=98.9
Q ss_pred CcceeccCCCCHHHHH-HHHHhcCCCCCCcEEeccCeecCCCCcHHHHHHHHHhhhhCCCcEEEECCCcchhhhHh----
Q psy13699 49 PVTVCGDIHGQFYDLK-ELFKVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQ---- 123 (308)
Q Consensus 49 ~i~viGDIHG~~~~L~-~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~---- 123 (308)
+|+++|||||++.... +.++ ....|.++++||+++ .+.+++..+.++. + .+++++||||.+....
T Consensus 2 rIa~isDiHg~~~~~~~~~l~---~~~pD~Vl~~GDi~~---~~~~~~~~l~~l~--~--p~~~V~GNHD~~~~~~~~~k 71 (238)
T cd07397 2 RIAIVGDVHGQWDLEDIKALH---LLQPDLVLFVGDFGN---ESVQLVRAISSLP--L--PKAVILGNHDAWYDATFRKK 71 (238)
T ss_pred EEEEEecCCCCchHHHHHHHh---ccCCCEEEECCCCCc---ChHHHHHHHHhCC--C--CeEEEcCCCcccccccccch
Confidence 6899999999987642 2333 234689999999986 4567777776653 3 4899999999755320
Q ss_pred ---------h-------hC------------------------Ch-HHHHHHhCCchhhhhhhHHhhccccceeEeCeEE
Q psy13699 124 ---------V-------YG------------------------FY-DECLRKYGSITVWRYCTEIFDYLSLSAIIDGRIF 162 (308)
Q Consensus 124 ---------~-------~g------------------------f~-~e~~~~~~~~~~~~~~~~~~~~LPl~~~i~~~~l 162 (308)
. ++ +. .++...|+-.+..+.+...++.++.++-....+|
T Consensus 72 ~~~l~~~L~~lg~~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr~~fgi~s~~eA~~~ive~~~~~~~~~~~Vl 151 (238)
T cd07397 72 GDRVQEQLELLGDLHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVKAVYGVISLEESAQRIIAAAKKAPPDLPLIL 151 (238)
T ss_pred HHHHHHHHHHhCCcEEeecccccCCCCeEEEeeCCccCCCccccCHHHHHHHhCCCCHHHHHHHHHHHhhhcCCCCCeEE
Confidence 0 00 01 2456667666777788888888864344455899
Q ss_pred EEcCCCCCCCCCHHHHHhhcccCCCCCCCcccccccCCCCCCCCCccCCCCCeeEeChhHHHhhhhhcC----ceEEEee
Q psy13699 163 CVHGGLSPSIQTLDQIRTIDRKQEVPHDGPMCDLLWSDPEDTQGWGVSPRGAGYLFGSDVVASFNAANN----IDMICRA 238 (308)
Q Consensus 163 ~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdP~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~----l~~iirg 238 (308)
+.|++++-.....+ +|. ...|.+.. .-+|...+.+.+++.. .++++=|
T Consensus 152 iaH~~~~G~g~~~~-----------------------~~c-g~d~~~~~----~~~G~~~l~~ai~~~~~~~~~~l~~fG 203 (238)
T cd07397 152 LAHNGPSGLGSDAE-----------------------DPC-GRDWKPPG----GDWGDPDLALAISQIQQGRQVPLVVFG 203 (238)
T ss_pred EeCcCCcCCCcccc-----------------------ccc-ccccCCcC----CCCCCHHHHHHHHHHhccCCCCEEEeC
Confidence 99999754332110 111 12343211 1367777777766654 7899999
Q ss_pred ccc
Q psy13699 239 HQL 241 (308)
Q Consensus 239 H~~ 241 (308)
|-.
T Consensus 204 H~H 206 (238)
T cd07397 204 HMH 206 (238)
T ss_pred Ccc
Confidence 954
No 38
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=99.04 E-value=1.3e-09 Score=89.70 Aligned_cols=118 Identities=19% Similarity=0.171 Sum_probs=80.6
Q ss_pred CcceeccCCCCHHHHHHHHHhcCCCCCCcEEeccCeecCCCCcH--HHHHHHHHhhhhCCCcEEEECCCcchhhhHhhhC
Q psy13699 49 PVTVCGDIHGQFYDLKELFKVGGDVPETNYLFMGDFVDRGFYSV--ETFLLLLALKVRYPDRITLIRGNHESRQITQVYG 126 (308)
Q Consensus 49 ~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~--evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~g 126 (308)
++.++||+||++. .....+.+.+|++||+++++..+- +.+.++.+++ .| .+++++||||....
T Consensus 1 ~i~~isD~H~~~~-------~~~~~~~D~vi~~GD~~~~~~~~~~~~~~~~l~~~~--~~-~~~~v~GNHD~~~~----- 65 (135)
T cd07379 1 RFVCISDTHSRHR-------TISIPDGDVLIHAGDLTERGTLEELQKFLDWLKSLP--HP-HKIVIAGNHDLTLD----- 65 (135)
T ss_pred CEEEEeCCCCCCC-------cCcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHhCC--CC-eEEEEECCCCCcCC-----
Confidence 4789999999987 123356789999999999886532 3555555443 12 36789999995311
Q ss_pred ChHHHHHHhCCchhhhhhhHHhhccccceeEeCeEEEEcCCCCCCCCCHHHHHhhcccCCCCCCCcccccccCCCCCCCC
Q psy13699 127 FYDECLRKYGSITVWRYCTEIFDYLSLSAIIDGRIFCVHGGLSPSIQTLDQIRTIDRKQEVPHDGPMCDLLWSDPEDTQG 206 (308)
Q Consensus 127 f~~e~~~~~~~~~~~~~~~~~~~~LPl~~~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdP~~~~~ 206 (308)
.-+.+++++||.+.+... ..+.
T Consensus 66 -----------------------------~~~~~ilv~H~~p~~~~~----------------------~~~~------- 87 (135)
T cd07379 66 -----------------------------PEDTDILVTHGPPYGHLD----------------------LVSS------- 87 (135)
T ss_pred -----------------------------CCCCEEEEECCCCCcCcc----------------------cccc-------
Confidence 124578999986422110 0000
Q ss_pred CccCCCCCeeEeChhHHHhhhhhcCceEEEeecccccCCce
Q psy13699 207 WGVSPRGAGYLFGSDVVASFNAANNIDMICRAHQLVMEGYK 247 (308)
Q Consensus 207 ~~~~~rg~g~~fg~~~~~~fl~~~~l~~iirgH~~~~~G~~ 247 (308)
....|.+.+.+++++.+.+.++-||...+.|++
T Consensus 88 --------~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~~~~ 120 (135)
T cd07379 88 --------GQRVGCEELLNRVQRVRPKLHVFGHIHEGYGAE 120 (135)
T ss_pred --------CcccCCHHHHHHHHHHCCcEEEEcCcCCcCcee
Confidence 013677888899999999999999999887775
No 39
>COG0639 ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms]
Probab=99.02 E-value=1.1e-09 Score=89.45 Aligned_cols=143 Identities=46% Similarity=0.791 Sum_probs=116.4
Q ss_pred hHhhhCChHHHHHHhCCchhhhh---hhHHhhccccceeEeC-eEEEEcCCCCCCC-CCHHHHHhhcccC--CCCCCCcc
Q psy13699 121 ITQVYGFYDECLRKYGSITVWRY---CTEIFDYLSLSAIIDG-RIFCVHGGLSPSI-QTLDQIRTIDRKQ--EVPHDGPM 193 (308)
Q Consensus 121 ~~~~~gf~~e~~~~~~~~~~~~~---~~~~~~~LPl~~~i~~-~~l~vHgGi~p~~-~~~~~i~~i~r~~--~~~~~~~~ 193 (308)
+...+++..++...++....|.. ..++|+.+|+.+.+.+ .++|.|++++|.+ ..+++++.+.|.. ..+..+..
T Consensus 3 l~~~~~~~~~~~~~~~~~~~w~~~~g~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~ 82 (155)
T COG0639 3 LTALYGFYDEKLRKYGEELEWLRAAGGLETFDSLPLAAVAEGGKLLCHHGGLSPGLDRLLDIIEVLDRLRACEVPHAGHT 82 (155)
T ss_pred hhhhhchhHHhhhhcCCceeeeeccchhhHHHhhhHHHHhcCCceeeecCCCCcchhhhHHHHHHHhhhhcccCCCcccc
Confidence 44556777776666654435665 9999999999999988 9999999999976 6778888777765 66677777
Q ss_pred cccccCCCCC--CCCCccCCCCCeeEeChhHHHhhhhhcCceEEEeecccccCCceeecCCeeEEEEeCCCCC
Q psy13699 194 CDLLWSDPED--TQGWGVSPRGAGYLFGSDVVASFNAANNIDMICRAHQLVMEGYKWHFNETVLTVWSAPNYC 264 (308)
Q Consensus 194 ~dllWsdP~~--~~~~~~~~rg~g~~fg~~~~~~fl~~~~l~~iirgH~~~~~G~~~~~~~~~iTifSa~~y~ 264 (308)
.+.+|++|.. ...|.++++|.+..+ .+.+..|...+..+.+.++|+....++...+.+..+|.||+++++
T Consensus 83 ~~~~~~~~~~~~~~~w~~~~~g~~~~~-~~~~~~f~~~~~~~~~~~~~~~~~~d~~~~~~~~~lt~~~~~~~~ 154 (155)
T COG0639 83 HDLLWSDPDGGDRRIWNPGPRGVPRDG-GDVTAVFGIVHTPKLIERAHVLYDIDTGAVFGGGLLTAFSAPNYC 154 (155)
T ss_pred ccccCCCCCCCcccccccCCCCCCccc-cchhhHHhhhcccceEEEEeEEEecCceEEeCCCeeeEEeccccc
Confidence 7779999874 578999999998777 788889997777777999999998888877766899999999986
No 40
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=98.99 E-value=2.3e-08 Score=86.52 Aligned_cols=58 Identities=24% Similarity=0.390 Sum_probs=42.6
Q ss_pred CcceeccCC-CCHH-----HHHHHHHhcCCCCCCcEEeccCeecCCCCcHHHHHHHHHhhhhCCCcEEEECCCcch
Q psy13699 49 PVTVCGDIH-GQFY-----DLKELFKVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHES 118 (308)
Q Consensus 49 ~i~viGDIH-G~~~-----~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~ 118 (308)
+|.||||.| |.-. .+.++++. .+.+.++.+||+++ .+++.++..+. ..++.++||||.
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~---~~~d~iih~GDi~~-----~~~~~~l~~~~----~~~~~V~GN~D~ 64 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVP---GKIQHVLCTGNLCS-----KETYDYLKTIA----PDVHIVRGDFDE 64 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhcc---CCCCEEEECCCCCC-----HHHHHHHHhhC----CceEEEECCCCc
Confidence 478999999 6533 24444433 45789999999986 77887776653 248999999996
No 41
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=98.81 E-value=3.6e-08 Score=78.29 Aligned_cols=117 Identities=24% Similarity=0.341 Sum_probs=82.6
Q ss_pred ceeccCCCCHHHHHHHH--HhcCCCCCCcEEeccCeecCCCCcHHHHHHHHHhhhhCCCcEEEECCCcchhhhHhhhCCh
Q psy13699 51 TVCGDIHGQFYDLKELF--KVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFY 128 (308)
Q Consensus 51 ~viGDIHG~~~~L~~ll--~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~ 128 (308)
+++||+|+......... ........+.+|++||+++.+....+...............++++.||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD----------- 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGDGPDPEEVLAAALALLLLLGIPVYVVPGNHD----------- 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCCEEEECCcccCCCCCchHHHHHHHHHhhcCCCCEEEeCCCce-----------
Confidence 47999999999988765 34445667899999999999988777555422222233356999999999
Q ss_pred HHHHHHhCCchhhhhhhHHhhccccceeEeCeEEEEcCCCCCCCCCHHHHHhhcccCCCCCCCcccccccCCCCCCCCCc
Q psy13699 129 DECLRKYGSITVWRYCTEIFDYLSLSAIIDGRIFCVHGGLSPSIQTLDQIRTIDRKQEVPHDGPMCDLLWSDPEDTQGWG 208 (308)
Q Consensus 129 ~e~~~~~~~~~~~~~~~~~~~~LPl~~~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdP~~~~~~~ 208 (308)
++++|+.+.+...... +..
T Consensus 70 --------------------------------i~~~H~~~~~~~~~~~---------------------~~~-------- 88 (131)
T cd00838 70 --------------------------------ILLTHGPPYDPLDELS---------------------PDE-------- 88 (131)
T ss_pred --------------------------------EEEeccCCCCCchhhc---------------------ccc--------
Confidence 8899998755432100 000
Q ss_pred cCCCCCeeEeChhHHHhhhhhcCceEEEeecccccCCce
Q psy13699 209 VSPRGAGYLFGSDVVASFNAANNIDMICRAHQLVMEGYK 247 (308)
Q Consensus 209 ~~~rg~g~~fg~~~~~~fl~~~~l~~iirgH~~~~~G~~ 247 (308)
..........+...+.+.++.||......+.
T Consensus 89 --------~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~ 119 (131)
T cd00838 89 --------DPGSEALLELLEKYGVDLVLSGHTHVYERRE 119 (131)
T ss_pred --------hhhHHHHHHHHHHhCCCEEEeCCeecccccc
Confidence 0055677778888899999999988765543
No 42
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=98.78 E-value=4.5e-08 Score=88.49 Aligned_cols=211 Identities=14% Similarity=0.137 Sum_probs=107.1
Q ss_pred CCcceeccCCCCH------HHHHHHHHhcCCCCCCcEEeccCeecC--C-----CCcHHHHHHHHHhhhhCCCcEEEECC
Q psy13699 48 SPVTVCGDIHGQF------YDLKELFKVGGDVPETNYLFMGDFVDR--G-----FYSVETFLLLLALKVRYPDRITLIRG 114 (308)
Q Consensus 48 ~~i~viGDIHG~~------~~L~~ll~~~~~~~~~~~vfLGD~vDr--G-----~~s~evl~~l~~lk~~~p~~v~~lrG 114 (308)
|++++|+|+|... ..+.+.++.. ....+.++++||++|. | +...+++..+..+... +..+++++|
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~-~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~~-g~~v~~v~G 78 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGE-ARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSDS-GVPCYFMHG 78 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhh-hccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHHc-CCeEEEEeC
Confidence 6899999999542 2344555432 2357899999999985 2 2345677777777643 235999999
Q ss_pred CcchhhhHhhhCChHHHHHHhCCchhhhhhhHHhhcccccee--E-eCeEEEEcCCCCCCCC-CHHHHHhhcccCCC---
Q psy13699 115 NHESRQITQVYGFYDECLRKYGSITVWRYCTEIFDYLSLSAI--I-DGRIFCVHGGLSPSIQ-TLDQIRTIDRKQEV--- 187 (308)
Q Consensus 115 NHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~LPl~~~--i-~~~~l~vHgGi~p~~~-~~~~i~~i~r~~~~--- 187 (308)
|||..... ...+..|. ..+|-... + +.+++++||-..+.-. .....+++-|....
T Consensus 79 NHD~~~~~-------~~~~~~g~-----------~~l~~~~~~~~~g~~i~l~HGd~~~~~d~~y~~~r~~~r~~~~~~~ 140 (241)
T PRK05340 79 NRDFLLGK-------RFAKAAGM-----------TLLPDPSVIDLYGQRVLLLHGDTLCTDDKAYQRFRRKVRNPWLQWL 140 (241)
T ss_pred CCchhhhH-------HHHHhCCC-----------EEeCCcEEEEECCEEEEEECCcccccCCHHHHHHHHHHhCHHHHHH
Confidence 99964321 11112221 22222222 2 5579999998654211 11222222221100
Q ss_pred CCCCcccccccCCCCCCCCCcc-----CCCCCeeE--eChhHHHhhhhhcCceEEEeecccccCCceeecCCeeEEEEeC
Q psy13699 188 PHDGPMCDLLWSDPEDTQGWGV-----SPRGAGYL--FGSDVVASFNAANNIDMICRAHQLVMEGYKWHFNETVLTVWSA 260 (308)
Q Consensus 188 ~~~~~~~dllWsdP~~~~~~~~-----~~rg~g~~--fg~~~~~~fl~~~~l~~iirgH~~~~~G~~~~~~~~~iTifSa 260 (308)
.........+|.. +.+.. +.+....+ ..++.+.+.+++.+.+.+|.||.-.+.-.....++.-++-.+-
T Consensus 141 ~~~~p~~~~~~ia----~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~~~~~~~~~~~~~~~l 216 (241)
T PRK05340 141 FLALPLSIRLRIA----AKMRAKSKAANQSKSLEIMDVNPEAVAALMEKHGVDTLIHGHTHRPAIHQLQAGGQPATRIVL 216 (241)
T ss_pred HHhCCHHHHHHHH----HHHHHHHHHhcCCCcccccCCCHHHHHHHHHHhCCCEEEECcccCcceeeccCCCcceEEEEe
Confidence 0000000000100 00000 00011112 3456778888999999999999876542222222211222333
Q ss_pred CCCCccCCCcEEEEEEcCCCeeEEEEE
Q psy13699 261 PNYCYRCGNVAAILELNENLQREFTIF 287 (308)
Q Consensus 261 ~~y~~~~~n~~avl~i~~~~~~~~~~~ 287 (308)
++. ...+.++.++++. .+++.|
T Consensus 217 gdw----~~~~~~~~~~~~~-~~~~~~ 238 (241)
T PRK05340 217 GDW----HEQGSVLKVDADG-VELIPF 238 (241)
T ss_pred CCC----CCCCeEEEEECCc-eEEEeC
Confidence 333 2347788888763 455444
No 43
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=98.77 E-value=1.1e-08 Score=91.52 Aligned_cols=72 Identities=11% Similarity=0.145 Sum_probs=59.0
Q ss_pred cCCcceeccCCCCHHHHHHHHHhcCCCCCCcEEeccCeecCCCCcHHHHHHHHHhhhhCCCcEEEECCCcchh
Q psy13699 47 DSPVTVCGDIHGQFYDLKELFKVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESR 119 (308)
Q Consensus 47 ~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 119 (308)
.+++.++||+||++..+.++++.....+.|.+|++||++++|+..-++..++..+.... ..++.++||||..
T Consensus 4 ~~kIl~iSDiHgn~~~le~l~~~~~~~~~D~vv~~GDl~~~g~~~~~~~~~l~~l~~l~-~pv~~V~GNhD~~ 75 (224)
T cd07388 4 VRYVLATSNPKGDLEALEKLVGLAPETGADAIVLIGNLLPKAAKSEDYAAFFRILGEAH-LPTFYVPGPQDAP 75 (224)
T ss_pred eeEEEEEEecCCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhcC-CceEEEcCCCChH
Confidence 36799999999999999999987655678999999999999977767777776664332 2489999999975
No 44
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=98.75 E-value=2.7e-07 Score=79.09 Aligned_cols=65 Identities=22% Similarity=0.287 Sum_probs=47.6
Q ss_pred cceeccCCCCHHHHHHHHHhcCCCCCCcEEeccCeecCCCCc-HHHHHHHHHhhhhCCCcEEEECCCcchhh
Q psy13699 50 VTVCGDIHGQFYDLKELFKVGGDVPETNYLFMGDFVDRGFYS-VETFLLLLALKVRYPDRITLIRGNHESRQ 120 (308)
Q Consensus 50 i~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s-~evl~~l~~lk~~~p~~v~~lrGNHE~~~ 120 (308)
|.++||+||++..+.. ......+.|.+|++||++++|... .+.+..+.++ +..++.++||||...
T Consensus 1 i~~~sD~H~~~~~~~~--~~~~~~~~D~vv~~GDl~~~~~~~~~~~~~~l~~~----~~p~~~v~GNHD~~~ 66 (188)
T cd07392 1 ILAISDIHGDVEKLEA--IILKAEEADAVIVAGDITNFGGKEAAVEINLLLAI----GVPVLAVPGNCDTPE 66 (188)
T ss_pred CEEEEecCCCHHHHHH--HHhhccCCCEEEECCCccCcCCHHHHHHHHHHHhc----CCCEEEEcCCCCCHH
Confidence 5789999999998877 333345678999999999998763 3333444333 235999999999754
No 45
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=98.73 E-value=2.8e-08 Score=84.34 Aligned_cols=67 Identities=24% Similarity=0.147 Sum_probs=48.1
Q ss_pred cceeccCCCCHHHHHHHH-HhcCCCCCCcEEeccCeecCCCCcHHHHHHHHHhhhhCCCcEEEECCCcchh
Q psy13699 50 VTVCGDIHGQFYDLKELF-KVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESR 119 (308)
Q Consensus 50 i~viGDIHG~~~~L~~ll-~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 119 (308)
+.++||+|++...+...+ +.....+.+.++++||+++++..+..+. ++...+ .+..+++++||||..
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d~li~~GDi~~~~~~~~~~~-~~~~~~--~~~~v~~v~GNHD~~ 68 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDADILVLAGDIGYLTDAPRFAP-LLLALK--GFEPVIYVPGNHEFY 68 (166)
T ss_pred CceEccccccCccccccccccCCCCCCCEEEECCCCCCCcchHHHHH-HHHhhc--CCccEEEeCCCcceE
Confidence 578999999987776655 3334456788999999999887665543 222222 234699999999975
No 46
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=98.64 E-value=1.8e-06 Score=76.65 Aligned_cols=192 Identities=17% Similarity=0.136 Sum_probs=102.1
Q ss_pred CcceeccCCCCHH----HH----HHHHHhcCCCCCCcEEeccCeecCCCCcH---HHHHHHHHhh-hhCCCcEEEECCCc
Q psy13699 49 PVTVCGDIHGQFY----DL----KELFKVGGDVPETNYLFMGDFVDRGFYSV---ETFLLLLALK-VRYPDRITLIRGNH 116 (308)
Q Consensus 49 ~i~viGDIHG~~~----~L----~~ll~~~~~~~~~~~vfLGD~vDrG~~s~---evl~~l~~lk-~~~p~~v~~lrGNH 116 (308)
+++++||+|-..+ .+ ..+.+.......+.+|++||++|.+.... .....+..+. ...| ++.++|||
T Consensus 2 ~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~~~~~p--~~~~~GNH 79 (214)
T cd07399 2 TLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDNDAEWEAADKAFARLDKAGIP--YSVLAGNH 79 (214)
T ss_pred EEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCCHHHHHHHHHHHHHHHHcCCc--EEEECCCC
Confidence 5789999995322 23 23334443445688999999999998433 2233333443 1234 88999999
Q ss_pred chhhhHhhhCChHHHHHHhCCchhhhhhhHHhhccccceeEeCeEEEEcCCCCCCCCCHHHHHhhcccCCCCCCCccccc
Q psy13699 117 ESRQITQVYGFYDECLRKYGSITVWRYCTEIFDYLSLSAIIDGRIFCVHGGLSPSIQTLDQIRTIDRKQEVPHDGPMCDL 196 (308)
Q Consensus 117 E~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~LPl~~~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dl 196 (308)
|... ...+.. ...-++.+.+.++.-|- ..-++++|-=+.+.-.
T Consensus 80 D~~~-~ld~~~---------~~~ql~WL~~~L~~~~~----~~~iv~~H~p~~~~~~----------------------- 122 (214)
T cd07399 80 DLVL-ALEFGP---------RDEVLQWANEVLKKHPD----RPAILTTHAYLNCDDS----------------------- 122 (214)
T ss_pred cchh-hCCCCC---------CHHHHHHHHHHHHHCCC----CCEEEEecccccCCCC-----------------------
Confidence 9422 111111 11222334444443331 2347788875432110
Q ss_pred ccCCCCCCCCCccCCCCCeeEeChhHHHhhhhhc-CceEEEeecccccCCceee-----cCCeeEEEEeCCCCCccCCC-
Q psy13699 197 LWSDPEDTQGWGVSPRGAGYLFGSDVVASFNAAN-NIDMICRAHQLVMEGYKWH-----FNETVLTVWSAPNYCYRCGN- 269 (308)
Q Consensus 197 lWsdP~~~~~~~~~~rg~g~~fg~~~~~~fl~~~-~l~~iirgH~~~~~G~~~~-----~~~~~iTifSa~~y~~~~~n- 269 (308)
|.+ ....|. ...-+.....+.++++ ++++++-||.-.. +.... .++.+..+.+........+|
T Consensus 123 -~~~--~~~~~~------~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~-~~~~~~~~~~~g~~v~~~~~~~q~~~~~g~~ 192 (214)
T cd07399 123 -RPD--SIDYDS------DVNDGQQIWDKLVKKNDNVFMVLSGHVHGA-GRTTLVSVGDAGRTVHQMLADYQGEPNGGNG 192 (214)
T ss_pred -cCc--cccccc------ccccHHHHHHHHHhCCCCEEEEEccccCCC-ceEEEcccCCCCCEeeEEeecccCCCCCCcc
Confidence 111 000110 0123455677888888 8999999997542 23222 13445555443322111122
Q ss_pred cEEEEEEcCC-CeeEEEEEec
Q psy13699 270 VAAILELNEN-LQREFTIFEA 289 (308)
Q Consensus 270 ~~avl~i~~~-~~~~~~~~~~ 289 (308)
.-.++.++++ .++.+.+|.|
T Consensus 193 ~~r~~~f~~~~~~i~~~tysp 213 (214)
T cd07399 193 FLRLLEFDPDNNKIDVRTYSP 213 (214)
T ss_pred eEEEEEEecCCCEEEEEeCCC
Confidence 3357888876 5888888865
No 47
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=98.62 E-value=6.4e-08 Score=86.98 Aligned_cols=204 Identities=10% Similarity=0.080 Sum_probs=101.1
Q ss_pred cceeccCCCCH------HHHHHHHHhcCCCCCCcEEeccCeecCC-----CC--cHHHHHHHHHhhhhCCCcEEEECCCc
Q psy13699 50 VTVCGDIHGQF------YDLKELFKVGGDVPETNYLFMGDFVDRG-----FY--SVETFLLLLALKVRYPDRITLIRGNH 116 (308)
Q Consensus 50 i~viGDIHG~~------~~L~~ll~~~~~~~~~~~vfLGD~vDrG-----~~--s~evl~~l~~lk~~~p~~v~~lrGNH 116 (308)
+++++|+|... ..+.+.++.... ..+.++++||++|.. +. ..++...+..++.. +..+++++|||
T Consensus 1 ~~~iSDlHl~~~~~~~~~~~l~~l~~~~~-~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~~-~~~v~~v~GNH 78 (231)
T TIGR01854 1 TLFISDLHLSPERPDITALFLDFLREEAR-KADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSDQ-GVPCYFMHGNR 78 (231)
T ss_pred CeEEEecCCCCCChhHHHHHHHHHHhhhc-cCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHHC-CCeEEEEcCCC
Confidence 36899999543 234444443222 578999999999952 11 13456666666543 34699999999
Q ss_pred chhhhHhhhCChHHHHHHhCCchhhhhhhHHhhcccccee---EeCeEEEEcCCCCCC-CCCHHHHHhhccc-C------
Q psy13699 117 ESRQITQVYGFYDECLRKYGSITVWRYCTEIFDYLSLSAI---IDGRIFCVHGGLSPS-IQTLDQIRTIDRK-Q------ 185 (308)
Q Consensus 117 E~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~LPl~~~---i~~~~l~vHgGi~p~-~~~~~~i~~i~r~-~------ 185 (308)
|...-. ......| +..+|-... -+.+++++||-.-.. -....-.+++-|. .
T Consensus 79 D~~~~~-------~~~~~~g-----------i~~l~~~~~~~~~g~~ill~HGd~~~~~d~~y~~~r~~~r~~~~~~~~~ 140 (231)
T TIGR01854 79 DFLIGK-------RFAREAG-----------MTLLPDPSVIDLYGQKVLLMHGDTLCTDDTAYQAFRAKVHQPWLQRLFL 140 (231)
T ss_pred chhhhH-------HHHHHCC-----------CEEECCCEEEEECCEEEEEEcCccccCCCHHHHHHHHHHhCHHHHHHHH
Confidence 974211 0111111 112222222 257899999975421 1111112222111 0
Q ss_pred CCCC--CCcccccccCCCCCCCCCccCCCCCeeEeChhHHHhhhhhcCceEEEeecccccCCceeecCCeeEEEEeCCCC
Q psy13699 186 EVPH--DGPMCDLLWSDPEDTQGWGVSPRGAGYLFGSDVVASFNAANNIDMICRAHQLVMEGYKWHFNETVLTVWSAPNY 263 (308)
Q Consensus 186 ~~~~--~~~~~dllWsdP~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~l~~iirgH~~~~~G~~~~~~~~~iTifSa~~y 263 (308)
..|. ...+...+++........ .+. .-....+..+.+.++..+.+++|.||+-.+.=.....++.-.+-++-++.
T Consensus 141 ~l~~~~r~~l~~~~~~~s~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~i~GHtH~~~~~~~~~~~~~~~~~~lgdW 217 (231)
T TIGR01854 141 HLPLAVRVKLARKIRAESRADKQM--KSQ-DIMDVNPAEVAAVMRRYGVDRLIHGHTHRPAIHPLQADGQPATRIVLGDW 217 (231)
T ss_pred hCCHHHHHHHHHHHHHHHHHhcCC--Ccc-hhhCCCHHHHHHHHHHcCCCEEEECCccCcceeecccCCCccEEEEECCC
Confidence 0000 001122222221100000 000 01123567788888999999999999876543332223322344444444
Q ss_pred CccCCCcEEEEEEcCCC
Q psy13699 264 CYRCGNVAAILELNENL 280 (308)
Q Consensus 264 ~~~~~n~~avl~i~~~~ 280 (308)
. ..+.++.+++++
T Consensus 218 ~----~~~~~~~~~~~g 230 (231)
T TIGR01854 218 Y----RQGSILRVDADG 230 (231)
T ss_pred c----cCCeEEEEcCCC
Confidence 2 235667777654
No 48
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=98.56 E-value=2.9e-06 Score=72.93 Aligned_cols=160 Identities=17% Similarity=0.163 Sum_probs=98.6
Q ss_pred CCcceeccCCCCHHHHHHHHHhcCCCCCCcEEeccCeecCCCCcHHHHHHHHHhhhhCCCcEEEECCCcchhhhHhhhCC
Q psy13699 48 SPVTVCGDIHGQFYDLKELFKVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGF 127 (308)
Q Consensus 48 ~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf 127 (308)
|++.|+||.||...+..+..+.....+.+.+|.+||++..... ..+..- ...+++.++||.|.....
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~~~~d~vih~GD~~~~~~~-----~~l~~~---~~~~i~~V~GN~D~~~~~----- 68 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNLEKVDAVIHAGDSTSPFTL-----DALEGG---LAAKLIAVRGNCDGEVDQ----- 68 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhhcCCCEEEECCCcCCccch-----HHhhcc---cccceEEEEccCCCcccc-----
Confidence 6899999999999766666666666778999999999865432 222210 124699999999964321
Q ss_pred hHHHHHHhCCchhhhhhhHHhhccccceeE---eCeEEEEcCCCCCCCCCHHHHHhhcccCCCCCCCcccccccCCCCCC
Q psy13699 128 YDECLRKYGSITVWRYCTEIFDYLSLSAII---DGRIFCVHGGLSPSIQTLDQIRTIDRKQEVPHDGPMCDLLWSDPEDT 204 (308)
Q Consensus 128 ~~e~~~~~~~~~~~~~~~~~~~~LPl~~~i---~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdP~~~ 204 (308)
..+|-...+ +-+++++||....--.
T Consensus 69 ---------------------~~~p~~~~~~~~g~ki~l~HGh~~~~~~------------------------------- 96 (172)
T COG0622 69 ---------------------EELPEELVLEVGGVKIFLTHGHLYFVKT------------------------------- 96 (172)
T ss_pred ---------------------ccCChhHeEEECCEEEEEECCCcccccc-------------------------------
Confidence 223332222 4689999996532111
Q ss_pred CCCccCCCCCeeEeChhHHHhhhhhcCceEEEeecccccCCceeecCCeeEEEEeCCCCCccC--CCcEEEEEEcCC-Ce
Q psy13699 205 QGWGVSPRGAGYLFGSDVVASFNAANNIDMICRAHQLVMEGYKWHFNETVLTVWSAPNYCYRC--GNVAAILELNEN-LQ 281 (308)
Q Consensus 205 ~~~~~~~rg~g~~fg~~~~~~fl~~~~l~~iirgH~~~~~G~~~~~~~~~iTifSa~~y~~~~--~n~~avl~i~~~-~~ 281 (308)
....+..+-+..+.+.+|.||+..+. ++ ..++ +++-+|+.+... ++.++++.++.+ .+
T Consensus 97 --------------~~~~l~~la~~~~~Dvli~GHTH~p~-~~-~~~~---i~~vNPGS~s~pr~~~~~sy~il~~~~~~ 157 (172)
T COG0622 97 --------------DLSLLEYLAKELGADVLIFGHTHKPV-AE-KVGG---ILLVNPGSVSGPRGGNPASYAILDVDNLE 157 (172)
T ss_pred --------------CHHHHHHHHHhcCCCEEEECCCCccc-EE-EECC---EEEEcCCCcCCCCCCCCcEEEEEEcCCCE
Confidence 12233444555678889999998754 22 2233 334467655433 344466666643 66
Q ss_pred eEEEEEecCC
Q psy13699 282 REFTIFEAAP 291 (308)
Q Consensus 282 ~~~~~~~~~~ 291 (308)
.....++...
T Consensus 158 ~~~~~~~~~~ 167 (172)
T COG0622 158 VEVLFLERDR 167 (172)
T ss_pred EEEEEeeccc
Confidence 7777776543
No 49
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.56 E-value=8.1e-07 Score=72.74 Aligned_cols=107 Identities=18% Similarity=0.125 Sum_probs=74.2
Q ss_pred ceeccCCCCHHHHHHHHHhcCCCCCCcEEeccCeecCCCCcHHHHHHHHHhhhhCCCcEEEECCCcchhhhHhhhCChHH
Q psy13699 51 TVCGDIHGQFYDLKELFKVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDE 130 (308)
Q Consensus 51 ~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e 130 (308)
.||||.||..+.+.++... ..+.+.++++||+. .+++..+..++ +..++.++||||
T Consensus 1 ~viSDtH~~~~~~~~~~~~--~~~~d~ii~~GD~~------~~~~~~~~~~~---~~~~~~V~GN~D------------- 56 (129)
T cd07403 1 LVISDTESPALYSPEIKVR--LEGVDLILSAGDLP------KEYLEYLVTML---NVPVYYVHGNHD------------- 56 (129)
T ss_pred CeeccccCccccchHHHhh--CCCCCEEEECCCCC------hHHHHHHHHHc---CCCEEEEeCCCc-------------
Confidence 4899999998777776654 46678999999973 34556665542 124889999999
Q ss_pred HHHHhCCchhhhhhhHHhhccccceeEeCeEEEEcCCCCCCCCCHHHHHhhcccCCCCCCCcccccccCCCCCCCCCccC
Q psy13699 131 CLRKYGSITVWRYCTEIFDYLSLSAIIDGRIFCVHGGLSPSIQTLDQIRTIDRKQEVPHDGPMCDLLWSDPEDTQGWGVS 210 (308)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~LPl~~~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdP~~~~~~~~~ 210 (308)
-+++++|+-+.+ .. +.+ .
T Consensus 57 ----------------------------~~Ilv~H~pp~~-~~------------------------~~~----~----- 74 (129)
T cd07403 57 ----------------------------VDILLTHAPPAG-IG------------------------DGE----D----- 74 (129)
T ss_pred ----------------------------cCEEEECCCCCc-Cc------------------------Ccc----c-----
Confidence 378999974211 00 000 0
Q ss_pred CCCCeeEeChhHHHhhhhhcCceEEEeecccccCCce
Q psy13699 211 PRGAGYLFGSDVVASFNAANNIDMICRAHQLVMEGYK 247 (308)
Q Consensus 211 ~rg~g~~fg~~~~~~fl~~~~l~~iirgH~~~~~G~~ 247 (308)
...-|.+.+.+++++.+.+.++.||...+..+.
T Consensus 75 ----~~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~~ 107 (129)
T cd07403 75 ----FAHRGFEAFLDFIDRFRPKLFIHGHTHLNYGYQ 107 (129)
T ss_pred ----ccccCHHHHHHHHHHHCCcEEEEcCcCCCcCcc
Confidence 012356778888889999999999988766554
No 50
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=98.44 E-value=3.7e-06 Score=69.40 Aligned_cols=116 Identities=20% Similarity=0.230 Sum_probs=75.2
Q ss_pred cceeccCCCCHHH----------HHHHHHhcCCCCCCcEEeccCeecCCCCc--HHHHHHHHHhhhhCCCcEEEECCCcc
Q psy13699 50 VTVCGDIHGQFYD----------LKELFKVGGDVPETNYLFMGDFVDRGFYS--VETFLLLLALKVRYPDRITLIRGNHE 117 (308)
Q Consensus 50 i~viGDIHG~~~~----------L~~ll~~~~~~~~~~~vfLGD~vDrG~~s--~evl~~l~~lk~~~p~~v~~lrGNHE 117 (308)
++.++|+|=.... |.++++.....+.+.++++||+++.|... .+...++..+.... ..++.++||||
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~l~~~~-~~~~~v~GNHD 79 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKALDPDLVVITGDLTQRGLPEEFEEAREFLDALPAPL-EPVLVVPGNHD 79 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhccCCCEEEECCCCCCCCCHHHHHHHHHHHHHccccC-CcEEEeCCCCe
Confidence 4678999932211 22244444455678999999999988742 23445555554321 25999999999
Q ss_pred hhhhHhhhCChHHHHHHhCCchhhhhhhHHhhccccceeEeCeEEEEcCCCCCCCCCHHHHHhhcccCCCCCCCcccccc
Q psy13699 118 SRQITQVYGFYDECLRKYGSITVWRYCTEIFDYLSLSAIIDGRIFCVHGGLSPSIQTLDQIRTIDRKQEVPHDGPMCDLL 197 (308)
Q Consensus 118 ~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~LPl~~~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dll 197 (308)
. ++++|..+.+....
T Consensus 80 ~------------------------------------------iv~~Hhp~~~~~~~----------------------- 94 (144)
T cd07400 80 V------------------------------------------IVVLHHPLVPPPGS----------------------- 94 (144)
T ss_pred E------------------------------------------EEEecCCCCCCCcc-----------------------
Confidence 6 88899775432110
Q ss_pred cCCCCCCCCCccCCCCCeeEeChhHHHhhhhhcCceEEEeecccccCCc
Q psy13699 198 WSDPEDTQGWGVSPRGAGYLFGSDVVASFNAANNIDMICRAHQLVMEGY 246 (308)
Q Consensus 198 WsdP~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~l~~iirgH~~~~~G~ 246 (308)
|.+ .+ .+.+.+.+++++.++++++.||.-.+..+
T Consensus 95 ~~~-----~~----------~~~~~~~~~l~~~~~~~~l~GH~H~~~~~ 128 (144)
T cd07400 95 GRE-----RL----------LDAGDALKLLAEAGVDLVLHGHKHVPYVG 128 (144)
T ss_pred ccc-----cC----------CCHHHHHHHHHHcCCCEEEECCCCCcCee
Confidence 001 00 15667888899999999999998765544
No 51
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=98.39 E-value=4e-07 Score=80.60 Aligned_cols=70 Identities=21% Similarity=0.252 Sum_probs=53.9
Q ss_pred CCcceeccCCCCHH----HHHHHHHhcCCCCCCcEEeccCeecCCCCcH-HHHHHHHHhhhhCCCcEEEECCCcchh
Q psy13699 48 SPVTVCGDIHGQFY----DLKELFKVGGDVPETNYLFMGDFVDRGFYSV-ETFLLLLALKVRYPDRITLIRGNHESR 119 (308)
Q Consensus 48 ~~i~viGDIHG~~~----~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~-evl~~l~~lk~~~p~~v~~lrGNHE~~ 119 (308)
+++.+++|+|+... .+.++++.......+.++++||++|.+.... ++..++..+.... .++++.||||..
T Consensus 2 ~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~l~~l~~~~--~v~~v~GNHD~~ 76 (223)
T cd07385 2 LRIAHLSDLHLGPFVSRERLERLVEKINALKPDLVVLTGDLVDGSVDVLELLLELLKKLKAPL--GVYAVLGNHDYY 76 (223)
T ss_pred CEEEEEeecCCCccCCHHHHHHHHHHHhccCCCEEEEcCcccCCcchhhHHHHHHHhccCCCC--CEEEECCCcccc
Confidence 67899999998744 6677776665556789999999999988765 5666666654333 499999999974
No 52
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=98.36 E-value=6.5e-07 Score=82.43 Aligned_cols=70 Identities=19% Similarity=0.146 Sum_probs=53.3
Q ss_pred CCcceeccCCCC----HHHHHHHHHhcCCCCCCcEEeccCeecCC--CCcHHHHHHHHHhhhhCCCcEEEECCCcchh
Q psy13699 48 SPVTVCGDIHGQ----FYDLKELFKVGGDVPETNYLFMGDFVDRG--FYSVETFLLLLALKVRYPDRITLIRGNHESR 119 (308)
Q Consensus 48 ~~i~viGDIHG~----~~~L~~ll~~~~~~~~~~~vfLGD~vDrG--~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 119 (308)
+++++++|+|.. ...+.++++.....+.|.++++||++|++ ...-++...+..++...| ++.+.||||..
T Consensus 50 ~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pDlVli~GD~~d~~~~~~~~~~~~~L~~L~~~~p--v~~V~GNHD~~ 125 (271)
T PRK11340 50 FKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDMPLNFSAFSDVLSPLAECAP--TFACFGNHDRP 125 (271)
T ss_pred cEEEEEcccCCCCcCCHHHHHHHHHHHHhcCCCEEEEccCcCCCCccccHHHHHHHHHHHhhcCC--EEEecCCCCcc
Confidence 679999999976 55577777766556778999999999954 233346667777765455 99999999964
No 53
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.30 E-value=1.3e-05 Score=73.52 Aligned_cols=72 Identities=19% Similarity=0.225 Sum_probs=47.4
Q ss_pred CcceeccCC--C-----------CHHHHHHHHHhcCCCCCCcEEeccCeecCCCC-cHHHHHHHHHhhhhCCCcEEEECC
Q psy13699 49 PVTVCGDIH--G-----------QFYDLKELFKVGGDVPETNYLFMGDFVDRGFY-SVETFLLLLALKVRYPDRITLIRG 114 (308)
Q Consensus 49 ~i~viGDIH--G-----------~~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~-s~evl~~l~~lk~~~p~~v~~lrG 114 (308)
++++|+|+| . ....+.++++.+.....+.+|++||+++.|.. +.+-+..+.+.-...+-.++.+.|
T Consensus 2 r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l~~p~~~v~G 81 (267)
T cd07396 2 RFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDGDNARAEEALDAVLAILDRLKGPVHHVLG 81 (267)
T ss_pred eEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCCEEEECCCeecCCCchHHHHHHHHHHHHHhcCCCEEEecC
Confidence 678999999 2 23556777766655557899999999998873 222232222222122234999999
Q ss_pred Ccchhh
Q psy13699 115 NHESRQ 120 (308)
Q Consensus 115 NHE~~~ 120 (308)
|||...
T Consensus 82 NHD~~~ 87 (267)
T cd07396 82 NHDLYN 87 (267)
T ss_pred cccccc
Confidence 999754
No 54
>PRK04036 DNA polymerase II small subunit; Validated
Probab=98.25 E-value=1e-05 Score=80.86 Aligned_cols=72 Identities=19% Similarity=0.306 Sum_probs=45.7
Q ss_pred cCCcceeccCC-CCH----HHHHHHHHhcC---------CCCCCcEEeccCeecC-CCCc---------------HHHHH
Q psy13699 47 DSPVTVCGDIH-GQF----YDLKELFKVGG---------DVPETNYLFMGDFVDR-GFYS---------------VETFL 96 (308)
Q Consensus 47 ~~~i~viGDIH-G~~----~~L~~ll~~~~---------~~~~~~~vfLGD~vDr-G~~s---------------~evl~ 96 (308)
+.++++|+|+| |.- ..+.++++... ....+.+|++||++|. |..+ .++..
T Consensus 243 ~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l~~ 322 (504)
T PRK04036 243 KVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAAAE 322 (504)
T ss_pred ccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHHHH
Confidence 46789999999 653 22444443322 2335789999999984 3221 13555
Q ss_pred HHHHhhhhCCCcEEEECCCcchhh
Q psy13699 97 LLLALKVRYPDRITLIRGNHESRQ 120 (308)
Q Consensus 97 ~l~~lk~~~p~~v~~lrGNHE~~~ 120 (308)
+|.++.... .+++++||||...
T Consensus 323 ~L~~L~~~i--~V~~ipGNHD~~~ 344 (504)
T PRK04036 323 YLKQIPEDI--KIIISPGNHDAVR 344 (504)
T ss_pred HHHhhhcCC--eEEEecCCCcchh
Confidence 566554333 4999999999754
No 55
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=98.17 E-value=0.00012 Score=67.46 Aligned_cols=71 Identities=11% Similarity=0.080 Sum_probs=46.8
Q ss_pred cCCcceeccCC-C-----------CHHHHHHHHHhcCC--CCCCcEEeccCeecCCCCcHHHHHHHHHhhhhCCCcEEEE
Q psy13699 47 DSPVTVCGDIH-G-----------QFYDLKELFKVGGD--VPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLI 112 (308)
Q Consensus 47 ~~~i~viGDIH-G-----------~~~~L~~ll~~~~~--~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~l 112 (308)
.++++.|+|+| . ....|.++++.+.. +..+-+|+.||+++.|. .+-+..+.+.-...+..++.+
T Consensus 14 ~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~--~~~~~~~~~~l~~l~~Pv~~v 91 (275)
T PRK11148 14 RVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHS--SEAYQHFAEGIAPLRKPCVWL 91 (275)
T ss_pred CEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCC--HHHHHHHHHHHhhcCCcEEEe
Confidence 46799999999 1 24557777765432 35688999999999874 222222222212223459999
Q ss_pred CCCcchh
Q psy13699 113 RGNHESR 119 (308)
Q Consensus 113 rGNHE~~ 119 (308)
.||||..
T Consensus 92 ~GNHD~~ 98 (275)
T PRK11148 92 PGNHDFQ 98 (275)
T ss_pred CCCCCCh
Confidence 9999973
No 56
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=98.09 E-value=0.00037 Score=61.85 Aligned_cols=212 Identities=22% Similarity=0.204 Sum_probs=121.6
Q ss_pred cCCcceeccCCCCHHHHHHHHHhcCCCCCCcEEeccCee--cCCCCcHHHHH-HHHHhhhhCCCcEEEECCCcchhhhHh
Q psy13699 47 DSPVTVCGDIHGQFYDLKELFKVGGDVPETNYLFMGDFV--DRGFYSVETFL-LLLALKVRYPDRITLIRGNHESRQITQ 123 (308)
Q Consensus 47 ~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~v--DrG~~s~evl~-~l~~lk~~~p~~v~~lrGNHE~~~~~~ 123 (308)
.|++.++.|+||..+.+.++++.+.....+-+++.||+. +.|+.-.-.-. .+..++.. ...++.++||.|...+..
T Consensus 3 ~mkil~vtDlHg~~~~~~k~~~~~~~~~~D~lviaGDlt~~~~~~~~~~~~~~~~e~l~~~-~~~v~avpGNcD~~~v~~ 81 (226)
T COG2129 3 KMKILAVTDLHGSEDSLKKLLNAAADIRADLLVIAGDLTYFHFGPKEVAEELNKLEALKEL-GIPVLAVPGNCDPPEVID 81 (226)
T ss_pred cceEEEEeccccchHHHHHHHHHHhhccCCEEEEecceehhhcCchHHHHhhhHHHHHHhc-CCeEEEEcCCCChHHHHH
Confidence 478999999999999999999988877889999999999 88874332221 03333321 246999999988765431
Q ss_pred hhCChHHHHHHhCCchhhhhhhHHhhccccceeEeCeEEEEcCCCCCCC-C-----CHHHHHhhccc-CCCCCCCccccc
Q psy13699 124 VYGFYDECLRKYGSITVWRYCTEIFDYLSLSAIIDGRIFCVHGGLSPSI-Q-----TLDQIRTIDRK-QEVPHDGPMCDL 196 (308)
Q Consensus 124 ~~gf~~e~~~~~~~~~~~~~~~~~~~~LPl~~~i~~~~l~vHgGi~p~~-~-----~~~~i~~i~r~-~~~~~~~~~~dl 196 (308)
. ....+ ..+. +-..-+++--||-=||..|.. . +.++|.+..+. .+...+...--+
T Consensus 82 ~-------l~~~~-~~v~----------~~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~s~l~~~v~~~~~~~~Il~ 143 (226)
T COG2129 82 V-------LKNAG-VNVH----------GRVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIYSKLKSLVKKADNPVNILL 143 (226)
T ss_pred H-------HHhcc-cccc----------cceEEecCcEEEEecccCCCCCCCccccCHHHHHHHHHHHHhcccCcceEEE
Confidence 1 11111 0000 011112333333336665532 1 23444432221 111100000111
Q ss_pred ccCCCCCCCCCccCCCCCeeEeChhHHHhhhhhcCceEEEeecccccCCceeecCCeeEEEEeCCCCCccCCCcEEEEEE
Q psy13699 197 LWSDPEDTQGWGVSPRGAGYLFGSDVVASFNAANNIDMICRAHQLVMEGYKWHFNETVLTVWSAPNYCYRCGNVAAILEL 276 (308)
Q Consensus 197 lWsdP~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~l~~iirgH~~~~~G~~~~~~~~~iTifSa~~y~~~~~n~~avl~i 276 (308)
...-|-...- ..+.| -.--|..++.++.++.+-.+.+.||=.-..|+..-- =||+-+|.-.+ ..+.|++.+
T Consensus 144 ~HaPP~gt~~--d~~~g-~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G~d~iG----~TivVNPG~~~--~g~yA~i~l 214 (226)
T COG2129 144 THAPPYGTLL--DTPSG-YVHVGSKAVRKLIEEFQPLLGLHGHIHESRGIDKIG----NTIVVNPGPLG--EGRYALIEL 214 (226)
T ss_pred ecCCCCCccc--cCCCC-ccccchHHHHHHHHHhCCceEEEeeecccccccccC----CeEEECCCCcc--CceEEEEEe
Confidence 1222322100 02223 124699999999999999999999965566775432 36777887643 567888988
Q ss_pred cCCCeeEEEEE
Q psy13699 277 NENLQREFTIF 287 (308)
Q Consensus 277 ~~~~~~~~~~~ 287 (308)
++. .+...+|
T Consensus 215 ~~~-~Vk~~~~ 224 (226)
T COG2129 215 EKE-VVKLEQF 224 (226)
T ss_pred cCc-EEEEEEe
Confidence 876 5555554
No 57
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=98.06 E-value=6.7e-06 Score=74.13 Aligned_cols=68 Identities=19% Similarity=0.145 Sum_probs=49.3
Q ss_pred CcceeccCCCCH------HHHHHHHHhcCCCCCCcEEeccCeecCCCCcHHHHHHHHHhhhhCCCcEEEECCCcchh
Q psy13699 49 PVTVCGDIHGQF------YDLKELFKVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESR 119 (308)
Q Consensus 49 ~i~viGDIHG~~------~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 119 (308)
++.+++|+|+++ ..+.++++.....+.+.+|+.||++++.+.+.+.+..+.++ .+..++++.||||..
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~l~~~---~~~pv~~v~GNHD~~ 74 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKIDHLHIAGDISNDFQRSLPFIEKLQEL---KGIKVTFNAGNHDML 74 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCCEEEECCccccchhhHHHHHHHHHHh---cCCcEEEECCCCCCC
Confidence 578999999753 23556666555556889999999999876666666555543 223499999999964
No 58
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=98.04 E-value=0.00021 Score=65.09 Aligned_cols=69 Identities=13% Similarity=-0.011 Sum_probs=42.6
Q ss_pred CcceeccCCCCH----------------HHHHHHHHhcCC--CCCCcEEeccCeecCCCCcH-------HHHHHHHHhhh
Q psy13699 49 PVTVCGDIHGQF----------------YDLKELFKVGGD--VPETNYLFMGDFVDRGFYSV-------ETFLLLLALKV 103 (308)
Q Consensus 49 ~i~viGDIHG~~----------------~~L~~ll~~~~~--~~~~~~vfLGD~vDrG~~s~-------evl~~l~~lk~ 103 (308)
+++++||+|-.. ..|.++++.... +..+.++++||+++.|...- +....+..+.
T Consensus 6 ~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~- 84 (262)
T cd07395 6 YFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLSLLD- 84 (262)
T ss_pred EEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHhhcc-
Confidence 467788888663 124555554432 35678999999999887542 1222222221
Q ss_pred hCCCcEEEECCCcchh
Q psy13699 104 RYPDRITLIRGNHESR 119 (308)
Q Consensus 104 ~~p~~v~~lrGNHE~~ 119 (308)
.+-.++.++||||..
T Consensus 85 -~~vp~~~i~GNHD~~ 99 (262)
T cd07395 85 -PDIPLVCVCGNHDVG 99 (262)
T ss_pred -CCCcEEEeCCCCCCC
Confidence 123599999999974
No 59
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=98.02 E-value=1e-05 Score=73.76 Aligned_cols=72 Identities=24% Similarity=0.235 Sum_probs=50.5
Q ss_pred CCcceeccCCC-C-----------HHHHHHHHHhcCCCCCCcEEeccCeecCCCCcHHHH----HHHHHhhhhCCCcEEE
Q psy13699 48 SPVTVCGDIHG-Q-----------FYDLKELFKVGGDVPETNYLFMGDFVDRGFYSVETF----LLLLALKVRYPDRITL 111 (308)
Q Consensus 48 ~~i~viGDIHG-~-----------~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl----~~l~~lk~~~p~~v~~ 111 (308)
|+++.++|+|- . ...|.++++.+.....|.+++.||++|+...+.+.. .++..++...|-.+++
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~v~~ 80 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIPIVV 80 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCceEEE
Confidence 67899999993 2 234555655554556889999999999987665433 4455555433345999
Q ss_pred ECCCcchh
Q psy13699 112 IRGNHESR 119 (308)
Q Consensus 112 lrGNHE~~ 119 (308)
+.||||..
T Consensus 81 i~GNHD~~ 88 (253)
T TIGR00619 81 ISGNHDSA 88 (253)
T ss_pred EccCCCCh
Confidence 99999975
No 60
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=97.99 E-value=0.00021 Score=65.25 Aligned_cols=73 Identities=21% Similarity=0.304 Sum_probs=51.1
Q ss_pred CCcceeccCCCC------HHHHHHHHHhcCCCCCCcEEeccCeecCCCCcHHHHHHHHHhhh--hCCCcEEEECCCcchh
Q psy13699 48 SPVTVCGDIHGQ------FYDLKELFKVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKV--RYPDRITLIRGNHESR 119 (308)
Q Consensus 48 ~~i~viGDIHG~------~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~--~~p~~v~~lrGNHE~~ 119 (308)
++++.|+|+|-. ...+.++++.....+.|-+|+.||+.+.|. .+-...+..+-. ..|..++.++||||..
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~~~--~~~~~~~~~~l~~~~~~~~~~~vpGNHD~~ 78 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTNDGE--PEEYRRLKELLARLELPAPVIVVPGNHDAR 78 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHhcCCCCEEEEccCcCCCCC--HHHHHHHHHHHhhccCCCceEeeCCCCcCC
Confidence 468899999977 334566667666666799999999999963 222333322222 4556799999999987
Q ss_pred hhH
Q psy13699 120 QIT 122 (308)
Q Consensus 120 ~~~ 122 (308)
..+
T Consensus 79 ~~~ 81 (301)
T COG1409 79 VVN 81 (301)
T ss_pred chH
Confidence 654
No 61
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=97.99 E-value=2e-05 Score=67.29 Aligned_cols=67 Identities=28% Similarity=0.365 Sum_probs=44.4
Q ss_pred cceeccCCCCHHHH---------------HHHHHhcC--CCCCCcEEeccCeecCCCCcHHHHHHHHHhhhhCCCcEEEE
Q psy13699 50 VTVCGDIHGQFYDL---------------KELFKVGG--DVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLI 112 (308)
Q Consensus 50 i~viGDIHG~~~~L---------------~~ll~~~~--~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~l 112 (308)
+++|+|+|=....- .++++... ..+.+.+|++||++++|..+.. +..+.++. ..++++
T Consensus 1 ~~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~~~~~~~-~~~l~~~~----~~~~~v 75 (168)
T cd07390 1 IYFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFGGKAGTE-LELLSRLN----GRKHLI 75 (168)
T ss_pred CeEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCCCChHHH-HHHHHhCC----CCeEEE
Confidence 47889998655432 22333222 2356899999999999986644 44554442 459999
Q ss_pred CCCcchhhh
Q psy13699 113 RGNHESRQI 121 (308)
Q Consensus 113 rGNHE~~~~ 121 (308)
+||||....
T Consensus 76 ~GNHD~~~~ 84 (168)
T cd07390 76 KGNHDSSLE 84 (168)
T ss_pred eCCCCchhh
Confidence 999997543
No 62
>PHA02546 47 endonuclease subunit; Provisional
Probab=97.86 E-value=2.5e-05 Score=74.26 Aligned_cols=72 Identities=19% Similarity=0.265 Sum_probs=49.1
Q ss_pred CCcceeccCC-C-----------CHHHHHHHHHhcCCCCCCcEEeccCeecCC-CCcHHHHHHHHH--hh--hhCCCcEE
Q psy13699 48 SPVTVCGDIH-G-----------QFYDLKELFKVGGDVPETNYLFMGDFVDRG-FYSVETFLLLLA--LK--VRYPDRIT 110 (308)
Q Consensus 48 ~~i~viGDIH-G-----------~~~~L~~ll~~~~~~~~~~~vfLGD~vDrG-~~s~evl~~l~~--lk--~~~p~~v~ 110 (308)
|+++.+||+| | ....|.++++.+.....+.+++.||++|+. +.+.+++.++.. ++ ...+-.++
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi~v~ 80 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGITLH 80 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCCeEE
Confidence 6889999999 4 223455666555556778999999999985 455555444433 11 12234699
Q ss_pred EECCCcchh
Q psy13699 111 LIRGNHESR 119 (308)
Q Consensus 111 ~lrGNHE~~ 119 (308)
+|.||||..
T Consensus 81 ~I~GNHD~~ 89 (340)
T PHA02546 81 VLVGNHDMY 89 (340)
T ss_pred EEccCCCcc
Confidence 999999974
No 63
>KOG0376|consensus
Probab=97.76 E-value=6.8e-06 Score=79.65 Aligned_cols=241 Identities=13% Similarity=-0.022 Sum_probs=160.0
Q ss_pred CCCHHHHHHHHHHHHHHHhhCCCceeec----CCcceeccCCCCHHHHHHHHHhcCCCCC-CcEEeccCeecCCCCcHHH
Q psy13699 20 PIKESEVKALCAKAREILVEESNVQRID----SPVTVCGDIHGQFYDLKELFKVGGDVPE-TNYLFMGDFVDRGFYSVET 94 (308)
Q Consensus 20 ~~~~~~~~~l~~~~~~il~~ep~l~~~~----~~i~viGDIHG~~~~L~~ll~~~~~~~~-~~~vfLGD~vDrG~~s~ev 94 (308)
-+...++..+++.+.+++..+||...+. .-.+.++|.||.+.|+..+++.. |.. .-|++-|++++++....+.
T Consensus 14 ~l~~~~fd~avdlysKaI~ldpnca~~~anRa~a~lK~e~~~~Al~Da~kaie~d--P~~~K~Y~rrg~a~m~l~~~~~A 91 (476)
T KOG0376|consen 14 ALKDKVFDVAVDLYSKAIELDPNCAIYFANRALAHLKVESFGGALHDALKAIELD--PTYIKAYVRRGTAVMALGEFKKA 91 (476)
T ss_pred hcccchHHHHHHHHHHHHhcCCcceeeechhhhhheeechhhhHHHHHHhhhhcC--chhhheeeeccHHHHhHHHHHHH
Confidence 3667788889999999999999887663 34789999999999999998864 333 3499999999999999999
Q ss_pred HHHHHHhhhhCCCcEEEECCCcchhhhHhhhCChHHHHHHhCCc--hhhhhhhHHhhccc-cceeEeCeEEEEcCCCCCC
Q psy13699 95 FLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSI--TVWRYCTEIFDYLS-LSAIIDGRIFCVHGGLSPS 171 (308)
Q Consensus 95 l~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~--~~~~~~~~~~~~LP-l~~~i~~~~l~vHgGi~p~ 171 (308)
+..+...+...|+...+.|++||+..+-..++|..+....++.. .+...+. +..++ ++....+.++=-| -+.-.
T Consensus 92 ~~~l~~~~~l~Pnd~~~~r~~~Ec~~~vs~~~fe~ai~~~~~d~~s~~~~~~~--~~~~~~i~~~y~g~~le~~-kvt~e 168 (476)
T KOG0376|consen 92 LLDLEKVKKLAPNDPDATRKIDECNKIVSEEKFEKAILTPEGDKKSVVEMKID--EEDMDLIESDYSGPVLEDH-KVTLE 168 (476)
T ss_pred HHHHHHhhhcCcCcHHHHHHHHHHHHHHHHHhhhhcccCCccCCccccccccc--cccccccccccCCcccccc-hhhHH
Confidence 99999999999999999999999998888888877766555321 1121111 11122 3333333333111 11000
Q ss_pred ------------------C--CCHHHHHhhcccCCCCC-CCcccccccCCCCCCC-CCccCCCCCeeEeChhHHHhhhhh
Q psy13699 172 ------------------I--QTLDQIRTIDRKQEVPH-DGPMCDLLWSDPEDTQ-GWGVSPRGAGYLFGSDVVASFNAA 229 (308)
Q Consensus 172 ------------------~--~~~~~i~~i~r~~~~~~-~~~~~dllWsdP~~~~-~~~~~~rg~g~~fg~~~~~~fl~~ 229 (308)
. .-+++...+.+....+- ...-.+..|+++.+.. .+....++.+...++..+..|+-+
T Consensus 169 ~vk~~~~~~~~~~~L~~k~a~~i~~~~~~~~~~l~~~ve~~~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~~ylfn 248 (476)
T KOG0376|consen 169 FVKTLMEVFKNQKKLPKKYAYSILDLAKTILRKLPSLVEISVPGDVKISVCGDTHGQFYDLLNIFELNGLPSETNPYLFN 248 (476)
T ss_pred HHHHHHHhhhcccccccccceeeHHHHhhHHhcCCcceEeecCCCceEEecCCccccccchhhhHhhcCCCCCccccccc
Confidence 0 00111222222111111 1134677889887644 355567777778888899999998
Q ss_pred cCceEEEeecccc------------cCCceeecC---CeeEEEEeCCCCCc
Q psy13699 230 NNIDMICRAHQLV------------MEGYKWHFN---ETVLTVWSAPNYCY 265 (308)
Q Consensus 230 ~~l~~iirgH~~~------------~~G~~~~~~---~~~iTifSa~~y~~ 265 (308)
.++.-+.+.+.-+ ..+|...++ +.++++|++++++-
T Consensus 249 gdfv~rgs~s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~ 299 (476)
T KOG0376|consen 249 GDFVDRGSWSVEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVK 299 (476)
T ss_pred CceeeecccceeeeeeehhhcccCCcceeeccCCccchHHHHHhCCCcchh
Confidence 8888888888432 223332222 24889999998864
No 64
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=97.71 E-value=9e-05 Score=66.25 Aligned_cols=67 Identities=27% Similarity=0.305 Sum_probs=46.0
Q ss_pred CcceeccCCCC------------HHHHHHHHHhcCC--CCCCcEEeccCeecCCCCc-H-HHHHHHHHhhhhCCCcEEEE
Q psy13699 49 PVTVCGDIHGQ------------FYDLKELFKVGGD--VPETNYLFMGDFVDRGFYS-V-ETFLLLLALKVRYPDRITLI 112 (308)
Q Consensus 49 ~i~viGDIHG~------------~~~L~~ll~~~~~--~~~~~~vfLGD~vDrG~~s-~-evl~~l~~lk~~~p~~v~~l 112 (308)
|+++++|+|=. ...+.++++.... ++.+-+|++||+++.|... . .+...+..+ +-.++.+
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l~~~----~~p~~~v 76 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGSPESYERLRELLAAL----PIPVYLL 76 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCCHHHHHHHHHHHhhc----CCCEEEe
Confidence 57899999944 3456777765443 3678999999999987532 2 233444333 3358999
Q ss_pred CCCcchh
Q psy13699 113 RGNHESR 119 (308)
Q Consensus 113 rGNHE~~ 119 (308)
+||||..
T Consensus 77 ~GNHD~~ 83 (240)
T cd07402 77 PGNHDDR 83 (240)
T ss_pred CCCCCCH
Confidence 9999974
No 65
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=97.68 E-value=7e-05 Score=65.89 Aligned_cols=72 Identities=25% Similarity=0.239 Sum_probs=48.4
Q ss_pred CcceeccCC-CCH--------------HHHHHHHHhcCCCCCCcEEeccCeecCCCCcHHHHH----HHHHhhhhCCCcE
Q psy13699 49 PVTVCGDIH-GQF--------------YDLKELFKVGGDVPETNYLFMGDFVDRGFYSVETFL----LLLALKVRYPDRI 109 (308)
Q Consensus 49 ~i~viGDIH-G~~--------------~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~----~l~~lk~~~p~~v 109 (308)
+++.++|+| |.. ..|.++++.+.....+.+|++||++|....+.+.+. .+.+++. .+-.+
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v 79 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPSPEALELLIEALRRLKE-AGIPV 79 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHH-CCCCE
Confidence 578999999 322 235666666555567889999999998876554433 3333321 12359
Q ss_pred EEECCCcchhhh
Q psy13699 110 TLIRGNHESRQI 121 (308)
Q Consensus 110 ~~lrGNHE~~~~ 121 (308)
+++.||||....
T Consensus 80 ~~~~GNHD~~~~ 91 (223)
T cd00840 80 FIIAGNHDSPSR 91 (223)
T ss_pred EEecCCCCCccc
Confidence 999999997543
No 66
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=97.65 E-value=0.0001 Score=64.86 Aligned_cols=69 Identities=22% Similarity=0.146 Sum_probs=38.7
Q ss_pred ceeccCCC---CHHH---HHHHHHhcCCCCCCcEEeccCeecCC--C-----Cc-HHHHHHHHHhhhhCCCcEEEECCCc
Q psy13699 51 TVCGDIHG---QFYD---LKELFKVGGDVPETNYLFMGDFVDRG--F-----YS-VETFLLLLALKVRYPDRITLIRGNH 116 (308)
Q Consensus 51 ~viGDIHG---~~~~---L~~ll~~~~~~~~~~~vfLGD~vDrG--~-----~s-~evl~~l~~lk~~~p~~v~~lrGNH 116 (308)
++|+|+|- .... +...++.....+.+.+|++||++|.- . .. .+.+..+..+. .....++.+.|||
T Consensus 1 ~~iSDlHlg~~~~~~~~~~~~~~~~~~~~~~~~lvl~GDi~d~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~v~~v~GNH 79 (217)
T cd07398 1 LFISDLHLGDGGPAADFLLLFLLAALALGEADALYLLGDIFDLWFGDDEVVPPAAHEVLAALLRLA-DRGTRVYYVPGNH 79 (217)
T ss_pred CEeeeecCCCCCCCHHHHHHHHHhhhccCCCCEEEEeccEEEEEecCCCCCChHHHHHHHHHHHHH-HCCCeEEEECCCc
Confidence 58999992 2222 22222221124678999999999842 1 11 12222333322 2335799999999
Q ss_pred chhh
Q psy13699 117 ESRQ 120 (308)
Q Consensus 117 E~~~ 120 (308)
|...
T Consensus 80 D~~~ 83 (217)
T cd07398 80 DFLL 83 (217)
T ss_pred hHHH
Confidence 9754
No 67
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.63 E-value=0.00057 Score=62.36 Aligned_cols=70 Identities=20% Similarity=0.127 Sum_probs=42.4
Q ss_pred cceeccCCCCHH------HH-HHHHHhcCCCCCCcEEeccCeecCCCCc--------H---HHHHHHHHhhhhCCCcEEE
Q psy13699 50 VTVCGDIHGQFY------DL-KELFKVGGDVPETNYLFMGDFVDRGFYS--------V---ETFLLLLALKVRYPDRITL 111 (308)
Q Consensus 50 i~viGDIHG~~~------~L-~~ll~~~~~~~~~~~vfLGD~vDrG~~s--------~---evl~~l~~lk~~~p~~v~~ 111 (308)
++.++|+|-... .. ..+++.......+.+|++||++|++... . +.+..+..+....+..++.
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 81 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVIKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVINKEKWFD 81 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHhhCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCCcceEEE
Confidence 467899995322 12 2344444455678999999999987531 1 2222222222222456899
Q ss_pred ECCCcchh
Q psy13699 112 IRGNHESR 119 (308)
Q Consensus 112 lrGNHE~~ 119 (308)
++||||..
T Consensus 82 v~GNHD~~ 89 (256)
T cd07401 82 IRGNHDLF 89 (256)
T ss_pred eCCCCCcC
Confidence 99999984
No 68
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=97.59 E-value=0.0001 Score=62.31 Aligned_cols=48 Identities=21% Similarity=0.301 Sum_probs=30.5
Q ss_pred CCCCCcEEeccCeecCCCCcH-HHH-HHHHHhhhh---C-CCcEEEECCCcchh
Q psy13699 72 DVPETNYLFMGDFVDRGFYSV-ETF-LLLLALKVR---Y-PDRITLIRGNHESR 119 (308)
Q Consensus 72 ~~~~~~~vfLGD~vDrG~~s~-evl-~~l~~lk~~---~-p~~v~~lrGNHE~~ 119 (308)
....+.+|++||++|.+..+. +.. ..+..++.. . +..++++.||||..
T Consensus 36 ~~~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~ 89 (156)
T cd08165 36 LLQPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIG 89 (156)
T ss_pred hcCCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcC
Confidence 456789999999999876432 221 222222221 1 23599999999964
No 69
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=97.55 E-value=0.00018 Score=66.08 Aligned_cols=69 Identities=20% Similarity=0.261 Sum_probs=44.7
Q ss_pred cceeccCCCCHHHHHHHHHh---cCCCCCCcEEeccCeecCCCC-cHHHH-------------HHHHHhhhhCCCcEEEE
Q psy13699 50 VTVCGDIHGQFYDLKELFKV---GGDVPETNYLFMGDFVDRGFY-SVETF-------------LLLLALKVRYPDRITLI 112 (308)
Q Consensus 50 i~viGDIHG~~~~L~~ll~~---~~~~~~~~~vfLGD~vDrG~~-s~evl-------------~~l~~lk~~~p~~v~~l 112 (308)
|+|+||+||+++.+...++. ....+.|-+|++||+-..+.. ..+.+ .++.. ....|--.++|
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g-~~~~p~~t~fi 79 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSG-EKKAPILTIFI 79 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcC-CccCCeeEEEE
Confidence 68999999999988764432 223568899999999644432 22222 11111 12245557999
Q ss_pred CCCcchh
Q psy13699 113 RGNHESR 119 (308)
Q Consensus 113 rGNHE~~ 119 (308)
.||||..
T Consensus 80 ~GNHE~~ 86 (262)
T cd00844 80 GGNHEAS 86 (262)
T ss_pred CCCCCCH
Confidence 9999964
No 70
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=97.53 E-value=0.00022 Score=64.03 Aligned_cols=69 Identities=19% Similarity=0.166 Sum_probs=45.4
Q ss_pred CCcceeccCC-CCHHHH----------------HHHHHhcCCCCCCcEEeccCeecCCCC---cHHHHHHHHHhhhhCCC
Q psy13699 48 SPVTVCGDIH-GQFYDL----------------KELFKVGGDVPETNYLFMGDFVDRGFY---SVETFLLLLALKVRYPD 107 (308)
Q Consensus 48 ~~i~viGDIH-G~~~~L----------------~~ll~~~~~~~~~~~vfLGD~vDrG~~---s~evl~~l~~lk~~~p~ 107 (308)
.++.+|+|+| |.-..+ .++.+.....+.+.+|++||+.+.... ..++.+++..+. .
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~~----~ 90 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKKGLEWRFIREFIEVTF----R 90 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCChHHHHHHHHHHHhcC----C
Confidence 6789999999 643332 223333344567899999999975554 233444554443 3
Q ss_pred cEEEECCCcchhh
Q psy13699 108 RITLIRGNHESRQ 120 (308)
Q Consensus 108 ~v~~lrGNHE~~~ 120 (308)
.+++++||||...
T Consensus 91 ~v~~V~GNHD~~~ 103 (225)
T TIGR00024 91 DLILIRGNHDALI 103 (225)
T ss_pred cEEEECCCCCCcc
Confidence 6999999999653
No 71
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=97.52 E-value=0.00077 Score=67.68 Aligned_cols=44 Identities=20% Similarity=0.315 Sum_probs=38.0
Q ss_pred CCCCcEEeccCeecCCCCcHHHHHHHHHhhhhCCCcEEEECCCcchhhh
Q psy13699 73 VPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQI 121 (308)
Q Consensus 73 ~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~ 121 (308)
-..|++-.+||+.||||.+-.+++.|+... +|=+-.||||-.++
T Consensus 183 L~VDhLHIvGDIyDRGp~pd~ImD~Lm~~h-----svDIQWGNHDIlWM 226 (640)
T PF06874_consen 183 LAVDHLHIVGDIYDRGPRPDKIMDRLMNYH-----SVDIQWGNHDILWM 226 (640)
T ss_pred HhhhheeecccccCCCCChhHHHHHHhcCC-----CccccccchHHHHH
Confidence 346889999999999999999999998764 68889999997654
No 72
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.51 E-value=0.00026 Score=63.37 Aligned_cols=198 Identities=15% Similarity=0.131 Sum_probs=103.4
Q ss_pred ceeccCCCC------HHHHHHHHHhcCCCCCCcEEeccCeecC--CCC-----cHHHHHHHHHhhhhCCCcEEEECCCcc
Q psy13699 51 TVCGDIHGQ------FYDLKELFKVGGDVPETNYLFMGDFVDR--GFY-----SVETFLLLLALKVRYPDRITLIRGNHE 117 (308)
Q Consensus 51 ~viGDIHG~------~~~L~~ll~~~~~~~~~~~vfLGD~vDr--G~~-----s~evl~~l~~lk~~~p~~v~~lrGNHE 117 (308)
+.|+|+|=. .+.|.+.++... +..+.++++||++|- |.+ -.+|...|..+.. ...+++.+.||||
T Consensus 1 lFISDlHL~~~~p~~t~~fl~Fl~~~a-~~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~a~-~G~~v~~i~GN~D 78 (237)
T COG2908 1 LFISDLHLGPKRPALTAFFLDFLREEA-AQADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRLAR-KGTRVYYIHGNHD 78 (237)
T ss_pred CeeeccccCCCCcHHHHHHHHHHHhcc-ccCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHHHh-cCCeEEEecCchH
Confidence 368999944 222445555432 356899999999853 222 2446666666543 3468999999999
Q ss_pred hhhhHhhhCChHHHHHHhCCchhhhhhhHHhhccccceeE---eCeEEEEcCCCC-CCCCC-----------HHHHHhhc
Q psy13699 118 SRQITQVYGFYDECLRKYGSITVWRYCTEIFDYLSLSAII---DGRIFCVHGGLS-PSIQT-----------LDQIRTID 182 (308)
Q Consensus 118 ~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~LPl~~~i---~~~~l~vHgGi~-p~~~~-----------~~~i~~i~ 182 (308)
.. +...++ ...|. +.-+|-..++ +.+++.+||-.- +.... +.+.--+.
T Consensus 79 fl-l~~~f~------~~~g~----------~~l~~~~~~~~l~g~~~Ll~HGD~f~t~~~~y~~~r~~~~~~~~~~lfln 141 (237)
T COG2908 79 FL-LGKRFA------QEAGG----------MTLLPDPIVLDLYGKRILLAHGDTFCTDDRAYQWFRYKVHWAWLQLLFLN 141 (237)
T ss_pred HH-HHHHHH------hhcCc----------eEEcCcceeeeecCcEEEEEeCCcccchHHHHHHHHHHcccHHHHHHHHH
Confidence 43 322111 12221 2344544444 789999999642 11100 00000000
Q ss_pred ccCCCCCCCcccccccCCCCCCCCCccCCCCCe---eEeChhHHHhhhhhcCceEEEeecccccCCceeecCCeeEEEEe
Q psy13699 183 RKQEVPHDGPMCDLLWSDPEDTQGWGVSPRGAG---YLFGSDVVASFNAANNIDMICRAHQLVMEGYKWHFNETVLTVWS 259 (308)
Q Consensus 183 r~~~~~~~~~~~dllWsdP~~~~~~~~~~rg~g---~~fg~~~~~~fl~~~~l~~iirgH~~~~~G~~~~~~~~~iTifS 259 (308)
.+.. -......-+|+. ..|........ .-..+.++.+-+++++++.+|.||...+..-...--.++ +
T Consensus 142 l~l~--~R~ri~~k~r~~----s~~~k~~~~~~~~i~d~~~~~v~~~~~~~~vd~vI~GH~Hr~ai~~i~~~~yi--~-- 211 (237)
T COG2908 142 LPLR--VRRRIAYKIRSL----SSWAKKKVKKAVNIMDVNPAAVADEARRHGVDGVIHGHTHRPAIHNIPGITYI--N-- 211 (237)
T ss_pred hHHH--HHHHHHHHHHHh----hHHhHHhhhhHHHHHHhhHHHHHHHHHHcCCCEEEecCcccHhhccCCCceEE--e--
Confidence 0000 000012234555 23333221111 125677777888999999999999876654332211111 1
Q ss_pred CCCCCccCCCcEEEEEEcCCCe
Q psy13699 260 APNYCYRCGNVAAILELNENLQ 281 (308)
Q Consensus 260 a~~y~~~~~n~~avl~i~~~~~ 281 (308)
+|.-...+++++++++..
T Consensus 212 ----lGdW~~~~s~~~v~~~~~ 229 (237)
T COG2908 212 ----LGDWVSEGSILEVDDGGL 229 (237)
T ss_pred ----cCcchhcceEEEEecCcE
Confidence 111125689999988754
No 73
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=97.49 E-value=0.00025 Score=61.94 Aligned_cols=70 Identities=11% Similarity=0.021 Sum_probs=43.7
Q ss_pred CCcceeccCCCCHH------------HHHHHHHhcCCCCCCcEEeccCeecCCCCc---HHHHHHHHHhhhhCCCcEEEE
Q psy13699 48 SPVTVCGDIHGQFY------------DLKELFKVGGDVPETNYLFMGDFVDRGFYS---VETFLLLLALKVRYPDRITLI 112 (308)
Q Consensus 48 ~~i~viGDIHG~~~------------~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s---~evl~~l~~lk~~~p~~v~~l 112 (308)
.++.+++|+|-... .+..+.+.......+.+|++||+++.+... .+.+..+.+.....+-.++++
T Consensus 3 ~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~ 82 (199)
T cd07383 3 FKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWAAT 82 (199)
T ss_pred eEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEEEE
Confidence 46899999996322 122222223344668899999999977653 444444433222222348999
Q ss_pred CCCcc
Q psy13699 113 RGNHE 117 (308)
Q Consensus 113 rGNHE 117 (308)
.||||
T Consensus 83 ~GNHD 87 (199)
T cd07383 83 FGNHD 87 (199)
T ss_pred CccCC
Confidence 99999
No 74
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=97.41 E-value=0.0003 Score=63.17 Aligned_cols=65 Identities=23% Similarity=0.255 Sum_probs=40.9
Q ss_pred cceeccCCCC---------HH----HH-HHHHHhcC--CCCCCcEEeccCeecCCCCc--HHHHHHHHHhhhhCCCcEEE
Q psy13699 50 VTVCGDIHGQ---------FY----DL-KELFKVGG--DVPETNYLFMGDFVDRGFYS--VETFLLLLALKVRYPDRITL 111 (308)
Q Consensus 50 i~viGDIHG~---------~~----~L-~~ll~~~~--~~~~~~~vfLGD~vDrG~~s--~evl~~l~~lk~~~p~~v~~ 111 (308)
+++++|||-. +. ++ .++.+... .++.|-+|+.||++++++.. .+.+.+|.++ |..+++
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~~~~~~~~~~l~~l~~l----~~~v~~ 76 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWAMKLEEAKLDLAWIDAL----PGTKVL 76 (232)
T ss_pred CeEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccCCChHHHHHHHHHHHhC----CCCeEE
Confidence 5789999955 21 22 23333211 13678999999999877533 2344444433 234899
Q ss_pred ECCCcch
Q psy13699 112 IRGNHES 118 (308)
Q Consensus 112 lrGNHE~ 118 (308)
+.||||.
T Consensus 77 V~GNHD~ 83 (232)
T cd07393 77 LKGNHDY 83 (232)
T ss_pred EeCCccc
Confidence 9999997
No 75
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=97.37 E-value=0.00034 Score=59.82 Aligned_cols=57 Identities=23% Similarity=0.262 Sum_probs=34.3
Q ss_pred HHHHHHhcCCCCCCcEEeccCeecCCCCcH-HHHHH--HHHhhhhCCCcEEEECCCcchhh
Q psy13699 63 LKELFKVGGDVPETNYLFMGDFVDRGFYSV-ETFLL--LLALKVRYPDRITLIRGNHESRQ 120 (308)
Q Consensus 63 L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~-evl~~--l~~lk~~~p~~v~~lrGNHE~~~ 120 (308)
+.++.+.....+.+.+|++||+++....+. +.... +..+ ...+..+++++||||...
T Consensus 30 ~~~l~~~~~~~~~d~lii~GDl~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~i~GNHD~~~ 89 (172)
T cd07391 30 LERLDRLIEEYGPERLIILGDLKHSFGGLSRQEFEEVAFLRL-LAKDVDVILIRGNHDGGL 89 (172)
T ss_pred HHHHHHHHHhcCCCEEEEeCcccccccccCHHHHHHHHHHHh-ccCCCeEEEEcccCccch
Confidence 344444444456789999999998654332 21111 1122 123346999999999753
No 76
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=97.36 E-value=0.0004 Score=67.55 Aligned_cols=54 Identities=17% Similarity=0.229 Sum_probs=43.1
Q ss_pred cCCcceeccCCCC------------HHHHHHHHHhcCCCCCCcEEeccCeecCCCCcHHHHHHHHH
Q psy13699 47 DSPVTVCGDIHGQ------------FYDLKELFKVGGDVPETNYLFMGDFVDRGFYSVETFLLLLA 100 (308)
Q Consensus 47 ~~~i~viGDIHG~------------~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~ 100 (308)
.+++..++|+|-- +..|.++++.+.....|-+|+.||+.|++.-|.+++..+++
T Consensus 3 ~mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~~Ps~~~~~~~~~ 68 (405)
T TIGR00583 3 TIRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHENKPSRKSLYQVLR 68 (405)
T ss_pred ceEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHH
Confidence 3789999999942 45678888777777789999999999999999887755433
No 77
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=97.35 E-value=0.0003 Score=68.53 Aligned_cols=72 Identities=22% Similarity=0.306 Sum_probs=48.1
Q ss_pred CCcceeccCC-CC-H------HH----HHHHHHhcCCCCCCcEEeccCeecCCCCcHHHH----HHHHHhhhhCCCcEEE
Q psy13699 48 SPVTVCGDIH-GQ-F------YD----LKELFKVGGDVPETNYLFMGDFVDRGFYSVETF----LLLLALKVRYPDRITL 111 (308)
Q Consensus 48 ~~i~viGDIH-G~-~------~~----L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl----~~l~~lk~~~p~~v~~ 111 (308)
|+++.++|+| |. + .+ |..+.+.......|.+|+.||++|++..+.+.. .++..++.. +-.+++
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~~~-~~~v~~ 79 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQT-GCQLVV 79 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccccCCCCcHHHHHHHHHHHHHHHhc-CCcEEE
Confidence 6789999999 32 1 11 334445445567889999999999986654432 344445432 235999
Q ss_pred ECCCcchhh
Q psy13699 112 IRGNHESRQ 120 (308)
Q Consensus 112 lrGNHE~~~ 120 (308)
+.||||...
T Consensus 80 I~GNHD~~~ 88 (407)
T PRK10966 80 LAGNHDSVA 88 (407)
T ss_pred EcCCCCChh
Confidence 999999753
No 78
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=97.27 E-value=0.00037 Score=62.92 Aligned_cols=67 Identities=19% Similarity=0.222 Sum_probs=40.2
Q ss_pred ceeccCC--CCH---HHHHHHHHhcCC-----CCCCcEEeccCeecCCCC------------c----HHHHHHHHHhhhh
Q psy13699 51 TVCGDIH--GQF---YDLKELFKVGGD-----VPETNYLFMGDFVDRGFY------------S----VETFLLLLALKVR 104 (308)
Q Consensus 51 ~viGDIH--G~~---~~L~~ll~~~~~-----~~~~~~vfLGD~vDrG~~------------s----~evl~~l~~lk~~ 104 (308)
++|+|+| +.. ..+..+++.... ...+.+|++||++|+... . .++..++.++...
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~ 81 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVPSH 81 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhcccC
Confidence 6899999 432 223333433221 134889999999997310 0 1234444455432
Q ss_pred CCCcEEEECCCcchh
Q psy13699 105 YPDRITLIRGNHESR 119 (308)
Q Consensus 105 ~p~~v~~lrGNHE~~ 119 (308)
-.++++.||||..
T Consensus 82 --~~v~~ipGNHD~~ 94 (243)
T cd07386 82 --IKIIIIPGNHDAV 94 (243)
T ss_pred --CeEEEeCCCCCcc
Confidence 3599999999974
No 79
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=97.23 E-value=0.00025 Score=65.43 Aligned_cols=69 Identities=23% Similarity=0.194 Sum_probs=43.4
Q ss_pred CCcceeccCCC----CHHHHHHHHHhcCCCCCCcEEeccCeecCCCCc-----HHHHHHHHHhhhhCCCcEEEECCCcch
Q psy13699 48 SPVTVCGDIHG----QFYDLKELFKVGGDVPETNYLFMGDFVDRGFYS-----VETFLLLLALKVRYPDRITLIRGNHES 118 (308)
Q Consensus 48 ~~i~viGDIHG----~~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s-----~evl~~l~~lk~~~p~~v~~lrGNHE~ 118 (308)
-+++++||.|. ....+.++.+. ....+-++++||+++.+... -..+..+..+....| ++.++||||.
T Consensus 5 ~~f~v~gD~~~~~~~~~~~~~~l~~~--~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~P--~~~~~GNHD~ 80 (294)
T cd00839 5 FKFAVFGDMGQNTNNSTNTLDHLEKE--LGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLASYVP--YMVTPGNHEA 80 (294)
T ss_pred EEEEEEEECCCCCCCcHHHHHHHHhc--cCCccEEEEcCchhhhcCCccchhHHHHHHHHHHHHhcCC--cEEcCccccc
Confidence 46899999995 23333333333 35567899999999544332 223333443433455 8999999997
Q ss_pred hh
Q psy13699 119 RQ 120 (308)
Q Consensus 119 ~~ 120 (308)
..
T Consensus 81 ~~ 82 (294)
T cd00839 81 DY 82 (294)
T ss_pred cc
Confidence 54
No 80
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=97.23 E-value=0.00049 Score=63.90 Aligned_cols=71 Identities=20% Similarity=0.202 Sum_probs=50.8
Q ss_pred CCcceeccCCCCHHH--HHHHHHhcCCCCCCcEEeccCeecC-CC-CcHHHHHHHHHhhhhCCCcEEEECCCcchhh
Q psy13699 48 SPVTVCGDIHGQFYD--LKELFKVGGDVPETNYLFMGDFVDR-GF-YSVETFLLLLALKVRYPDRITLIRGNHESRQ 120 (308)
Q Consensus 48 ~~i~viGDIHG~~~~--L~~ll~~~~~~~~~~~vfLGD~vDr-G~-~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~ 120 (308)
-+|+-++|+|-.... ..+.+........|-+++.|||+|+ .+ ....+...+..|+..+| ++++.||||...
T Consensus 45 ~~iv~lSDlH~~~~~~~~~~~~~~i~~~~~DlivltGD~~~~~~~~~~~~~~~~L~~L~~~~g--v~av~GNHd~~~ 119 (284)
T COG1408 45 LKIVQLSDLHSLPFREEKLALLIAIANELPDLIVLTGDYVDGDRPPGVAALALFLAKLKAPLG--VFAVLGNHDYGV 119 (284)
T ss_pred eEEEEeehhhhchhhHHHHHHHHHHHhcCCCEEEEEeeeecCCCCCCHHHHHHHHHhhhccCC--EEEEeccccccc
Confidence 469999999988766 2223333333334999999999995 44 44557777777776554 999999998754
No 81
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=97.08 E-value=0.0012 Score=55.26 Aligned_cols=66 Identities=21% Similarity=0.218 Sum_probs=44.1
Q ss_pred cceeccCCC------------CHHHHHHHH-HhcC--CCCCCcEEeccCeecCCCCcHHHHHHHHHhhhhCCCcEEEECC
Q psy13699 50 VTVCGDIHG------------QFYDLKELF-KVGG--DVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRG 114 (308)
Q Consensus 50 i~viGDIHG------------~~~~L~~ll-~~~~--~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrG 114 (308)
++.+||.|= +.+.....+ +... ..++|.+++|||+.-.-....+...++.+|. ++.++++|
T Consensus 6 myfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n~~~~a~~IlerLn----Grkhlv~G 81 (186)
T COG4186 6 MYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGANRERAAGLILERLN----GRKHLVPG 81 (186)
T ss_pred EEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEecccccccchhhHHHHHHHHcC----CcEEEeeC
Confidence 678888883 344443333 2211 2468899999999865555555666665554 78999999
Q ss_pred Ccchh
Q psy13699 115 NHESR 119 (308)
Q Consensus 115 NHE~~ 119 (308)
|||--
T Consensus 82 NhDk~ 86 (186)
T COG4186 82 NHDKC 86 (186)
T ss_pred CCCCC
Confidence 99964
No 82
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=96.91 E-value=0.026 Score=51.63 Aligned_cols=32 Identities=6% Similarity=-0.058 Sum_probs=25.5
Q ss_pred EeChhHHHhhhhhcCceEEEeecccccCCceeec
Q psy13699 217 LFGSDVVASFNAANNIDMICRAHQLVMEGYKWHF 250 (308)
Q Consensus 217 ~fg~~~~~~fl~~~~l~~iirgH~~~~~G~~~~~ 250 (308)
+-.++.+++.|+..+-.+|..||+. ++.+..+
T Consensus 202 ~l~~~~s~~il~~~~P~~vfsGhdH--~~C~~~h 233 (257)
T cd08163 202 LLEPSLSEVILKAVQPVIAFSGDDH--DYCEVVH 233 (257)
T ss_pred ecCHHHHHHHHHhhCCcEEEecCCC--ccceeEc
Confidence 4688999999999999999999974 4444444
No 83
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=96.89 E-value=0.0019 Score=55.42 Aligned_cols=50 Identities=22% Similarity=0.245 Sum_probs=32.1
Q ss_pred cCCCCCCcEEeccCeecCCCCcH--HHHHHHHHhhhhC--------CCcEEEECCCcchh
Q psy13699 70 GGDVPETNYLFMGDFVDRGFYSV--ETFLLLLALKVRY--------PDRITLIRGNHESR 119 (308)
Q Consensus 70 ~~~~~~~~~vfLGD~vDrG~~s~--evl~~l~~lk~~~--------p~~v~~lrGNHE~~ 119 (308)
......+.+|++||++|.+.... +....+..++..+ +..++.+.||||..
T Consensus 41 i~~~~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g 100 (171)
T cd07384 41 LQRLKPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIG 100 (171)
T ss_pred HHhcCCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccC
Confidence 34456789999999999987532 2222232222211 34599999999975
No 84
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=96.85 E-value=0.0019 Score=56.65 Aligned_cols=48 Identities=19% Similarity=0.360 Sum_probs=35.7
Q ss_pred CCCCCCcEEeccCeecCCCCc--HHHHHHHHHhhhhCC----CcEEEECCCcch
Q psy13699 71 GDVPETNYLFMGDFVDRGFYS--VETFLLLLALKVRYP----DRITLIRGNHES 118 (308)
Q Consensus 71 ~~~~~~~~vfLGD~vDrG~~s--~evl~~l~~lk~~~p----~~v~~lrGNHE~ 118 (308)
.....+-++||||++|.|+.+ .+..+.+.+++..++ ..++.|.||||-
T Consensus 39 ~~l~PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDI 92 (195)
T cd08166 39 NFVQPDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDI 92 (195)
T ss_pred hccCCCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCc
Confidence 334678999999999999964 336676767664422 358899999995
No 85
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=96.68 E-value=0.0021 Score=57.97 Aligned_cols=65 Identities=31% Similarity=0.303 Sum_probs=43.9
Q ss_pred CcceeccCCCCH---------HHHHHHHHhcCCC-CCCcEEeccCeecCCCCcH-----HHHHHHHHhhhhCCCcEEEEC
Q psy13699 49 PVTVCGDIHGQF---------YDLKELFKVGGDV-PETNYLFMGDFVDRGFYSV-----ETFLLLLALKVRYPDRITLIR 113 (308)
Q Consensus 49 ~i~viGDIHG~~---------~~L~~ll~~~~~~-~~~~~vfLGD~vDrG~~s~-----evl~~l~~lk~~~p~~v~~lr 113 (308)
+++.++|+||.+ ..+.++++..... +..-++..||+++.++.+. .++..+..+. + . ++..
T Consensus 2 ~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~~~~~~~~~~~l~~~g---~-d-~~~~ 76 (252)
T cd00845 2 TILHTNDLHGHFEPAGGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPSTATKGEANIELMNALG---Y-D-AVTI 76 (252)
T ss_pred EEEEecccccCccccCCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchhccCCcHHHHHHHhcC---C-C-EEee
Confidence 578899999887 4566667655433 3446678999999887653 4555555543 2 2 3456
Q ss_pred CCcch
Q psy13699 114 GNHES 118 (308)
Q Consensus 114 GNHE~ 118 (308)
||||.
T Consensus 77 GNHe~ 81 (252)
T cd00845 77 GNHEF 81 (252)
T ss_pred ccccc
Confidence 99996
No 86
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=96.53 E-value=0.006 Score=51.32 Aligned_cols=66 Identities=24% Similarity=0.322 Sum_probs=47.3
Q ss_pred ceeccCCCCHHHHHHHHHhcC--CCCCCcEEeccCeecCCCCcHHHHHHHHHhhhhCCCcEEEECCCcc
Q psy13699 51 TVCGDIHGQFYDLKELFKVGG--DVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHE 117 (308)
Q Consensus 51 ~viGDIHG~~~~L~~ll~~~~--~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE 117 (308)
.|+||+||+++.+.+-++... ..+-+-++++||+..-...+ +-+.-...=....|--.+++-||||
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~~~-~~~~~y~~g~~~~pipTyf~ggn~~ 68 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKKKGPFDALLCVGDFFGDDEDD-EELEAYKDGSKKVPIPTYFLGGNNP 68 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcccCCeeEEEEecCccCCccch-hhHHHHhcCCccCCCCEEEECCCCC
Confidence 489999999999877665422 34678899999998655554 3333333334456667999999998
No 87
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=96.43 E-value=0.0018 Score=57.65 Aligned_cols=72 Identities=18% Similarity=0.236 Sum_probs=44.9
Q ss_pred CCcceeccCCCCHHHHHHHHHhcCCCCCCcEEeccCeecCCCCcHHHH--------------------------HHHHHh
Q psy13699 48 SPVTVCGDIHGQFYDLKELFKVGGDVPETNYLFMGDFVDRGFYSVETF--------------------------LLLLAL 101 (308)
Q Consensus 48 ~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl--------------------------~~l~~l 101 (308)
.++.+++|.||+++.+.++.+.+.....|-++|+||++-....+.|-. .++..|
T Consensus 6 ~kilA~s~~~g~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~~ff~~L 85 (255)
T PF14582_consen 6 RKILAISNFRGDFELLERLVEVIPEKGPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSEALDKFFRIL 85 (255)
T ss_dssp -EEEEEE--TT-HHHHHHHHHHHHHHT-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHHHHHHHHHHH
T ss_pred hhheeecCcchHHHHHHHHHhhccccCCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHHHHHHHHHHH
Confidence 468899999999999999998877778899999999986655444333 333333
Q ss_pred hhhCCCcEEEECCCcchhh
Q psy13699 102 KVRYPDRITLIRGNHESRQ 120 (308)
Q Consensus 102 k~~~p~~v~~lrGNHE~~~ 120 (308)
. ..+--+++|+||||...
T Consensus 86 ~-~~~~p~~~vPG~~Dap~ 103 (255)
T PF14582_consen 86 G-ELGVPVFVVPGNMDAPE 103 (255)
T ss_dssp H-CC-SEEEEE--TTS-SH
T ss_pred H-hcCCcEEEecCCCCchH
Confidence 3 23346899999999753
No 88
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=96.27 E-value=0.0097 Score=57.49 Aligned_cols=73 Identities=23% Similarity=0.258 Sum_probs=51.5
Q ss_pred CCcceeccCCCC-------------HHHHHHHHHhcCCCCCCcEEeccCeecCCCCcHHHHHHHHH-hhhhC--CCcEEE
Q psy13699 48 SPVTVCGDIHGQ-------------FYDLKELFKVGGDVPETNYLFMGDFVDRGFYSVETFLLLLA-LKVRY--PDRITL 111 (308)
Q Consensus 48 ~~i~viGDIHG~-------------~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~-lk~~~--p~~v~~ 111 (308)
||+..++|.|=- +.+|..+++.+.....|-+|.-||+.|++.-|.+++..+.. ++... .=.+++
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ipv~~ 80 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIPVVV 80 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCCEEEEccccccCCCCCHHHHHHHHHHHHHhccCCCcEEE
Confidence 578888898844 33455556666666679999999999999888876655444 22222 114999
Q ss_pred ECCCcchhh
Q psy13699 112 IRGNHESRQ 120 (308)
Q Consensus 112 lrGNHE~~~ 120 (308)
|.||||...
T Consensus 81 I~GNHD~~~ 89 (390)
T COG0420 81 IAGNHDSPS 89 (390)
T ss_pred ecCCCCchh
Confidence 999999864
No 89
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=96.15 E-value=0.012 Score=51.56 Aligned_cols=64 Identities=19% Similarity=0.228 Sum_probs=42.4
Q ss_pred cCCCCHHHHHHHHHhc-CCCCCCcEEeccCeecCCCCcHH-HHHHHHHhhhhC---------------------CCcEEE
Q psy13699 55 DIHGQFYDLKELFKVG-GDVPETNYLFMGDFVDRGFYSVE-TFLLLLALKVRY---------------------PDRITL 111 (308)
Q Consensus 55 DIHG~~~~L~~ll~~~-~~~~~~~~vfLGD~vDrG~~s~e-vl~~l~~lk~~~---------------------p~~v~~ 111 (308)
|++|+=.=|.++++.. .....+.++||||++|.|--+-+ =-....+++..+ .-.++.
T Consensus 24 d~~~~D~YL~~~~~~~~~~l~Pd~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~ 103 (193)
T cd08164 24 DLFGNDYFLGHIVSMMQFWLKPDAVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLIN 103 (193)
T ss_pred hhhhhHHHHHHHHHHHHHhcCCCEEEEeccccCCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEE
Confidence 5567766677877653 34567899999999998754332 223444444332 135789
Q ss_pred ECCCcch
Q psy13699 112 IRGNHES 118 (308)
Q Consensus 112 lrGNHE~ 118 (308)
|.||||-
T Consensus 104 V~GNHDI 110 (193)
T cd08164 104 IAGNHDV 110 (193)
T ss_pred ECCcccC
Confidence 9999996
No 90
>PLN02533 probable purple acid phosphatase
Probab=96.09 E-value=0.0059 Score=59.92 Aligned_cols=71 Identities=21% Similarity=0.238 Sum_probs=43.3
Q ss_pred cCCcceeccCCCCHHHHHHHHHhcCCCCCCcEEeccCeecCCCCcH---HHHHHHHHhhhhCCCcEEEECCCcchhh
Q psy13699 47 DSPVTVCGDIHGQFYDLKELFKVGGDVPETNYLFMGDFVDRGFYSV---ETFLLLLALKVRYPDRITLIRGNHESRQ 120 (308)
Q Consensus 47 ~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~---evl~~l~~lk~~~p~~v~~lrGNHE~~~ 120 (308)
+-+++++||+|-. ......++.+.....+-++++||+++-+...- +-..++..+....| ++.+.||||...
T Consensus 139 ~~~f~v~GDlG~~-~~~~~tl~~i~~~~pD~vl~~GDl~y~~~~~~~wd~f~~~i~~l~s~~P--~m~~~GNHE~~~ 212 (427)
T PLN02533 139 PIKFAVSGDLGTS-EWTKSTLEHVSKWDYDVFILPGDLSYANFYQPLWDTFGRLVQPLASQRP--WMVTHGNHELEK 212 (427)
T ss_pred CeEEEEEEeCCCC-cccHHHHHHHHhcCCCEEEEcCccccccchHHHHHHHHHHhhhHhhcCc--eEEeCccccccc
Confidence 4568999999632 22223344333445788999999997543321 12233333433456 889999999753
No 91
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=96.02 E-value=0.0069 Score=55.72 Aligned_cols=65 Identities=22% Similarity=0.221 Sum_probs=40.0
Q ss_pred CcceeccCCCCH----------------HHHHHHHHhcCCCCCCcEEe-ccCeecCCCCc-----------HHHHHHHHH
Q psy13699 49 PVTVCGDIHGQF----------------YDLKELFKVGGDVPETNYLF-MGDFVDRGFYS-----------VETFLLLLA 100 (308)
Q Consensus 49 ~i~viGDIHG~~----------------~~L~~ll~~~~~~~~~~~vf-LGD~vDrG~~s-----------~evl~~l~~ 100 (308)
+|+.++|+||++ ..+..+++.......+.+++ .||+++..+.+ ..++..+..
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~~~~~~~~~~~~~~ln~ 81 (277)
T cd07410 2 RILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSPLADYYAKIEDGDPHPMIAAMNA 81 (277)
T ss_pred eEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccHHHHHhhhcccCCCChHHHHHHh
Confidence 467899999986 33556665544333344444 89999876522 235555555
Q ss_pred hhhhCCCcEEEECCCcch
Q psy13699 101 LKVRYPDRITLIRGNHES 118 (308)
Q Consensus 101 lk~~~p~~v~~lrGNHE~ 118 (308)
+. + -++..||||.
T Consensus 82 ~g---~--d~~~lGNHe~ 94 (277)
T cd07410 82 LG---Y--DAGTLGNHEF 94 (277)
T ss_pred cC---C--CEEeecccCc
Confidence 54 2 2455699995
No 92
>PF08321 PPP5: PPP5 TPR repeat region; InterPro: IPR013235 This domain is specific to the PPP5 subfamily of serine/threonine phosphatases.; GO: 0004722 protein serine/threonine phosphatase activity, 0046872 metal ion binding; PDB: 3ICF_B 3H60_B 3H63_A 3H66_A 3H62_B 1A17_A 1S95_B 3H69_A 3H68_D 3H64_D ....
Probab=95.98 E-value=0.017 Score=44.78 Aligned_cols=41 Identities=17% Similarity=0.217 Sum_probs=33.7
Q ss_pred HHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHhhCCCceee
Q psy13699 6 QDLDRQIEQLKRCDPIKESEVKALCAKAREILVEESNVQRI 46 (308)
Q Consensus 6 ~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~il~~ep~l~~~ 46 (308)
+-+..|+++++.+..++...+..|+.++.++|+++|+++++
T Consensus 55 efv~~mie~FK~~K~Lhkkyv~~Il~~~~~llk~~PslVeI 95 (95)
T PF08321_consen 55 EFVKAMIEWFKNQKKLHKKYVYQILLEAKKLLKQLPSLVEI 95 (95)
T ss_dssp HHHHHHHHHHHCT----HHHHHHHHHHHHHHHHTS-SEEEE
T ss_pred HHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHhCcCccCC
Confidence 46889999999999999999999999999999999999975
No 93
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=95.52 E-value=0.026 Score=51.55 Aligned_cols=69 Identities=28% Similarity=0.344 Sum_probs=39.9
Q ss_pred CcceeccCCCC--H--HHHHHHH-HhcCCCCCCcEEeccCee-cCCCCcH------HHHHHHHH-hhhhCCCcEEEECCC
Q psy13699 49 PVTVCGDIHGQ--F--YDLKELF-KVGGDVPETNYLFMGDFV-DRGFYSV------ETFLLLLA-LKVRYPDRITLIRGN 115 (308)
Q Consensus 49 ~i~viGDIHG~--~--~~L~~ll-~~~~~~~~~~~vfLGD~v-DrG~~s~------evl~~l~~-lk~~~p~~v~~lrGN 115 (308)
+++++||.=.. . ..+.+.+ +.....+.+-+|++||++ +-|..+. +.+..++. +....| ++.+.||
T Consensus 2 ~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~~~~~~P--~~~v~GN 79 (277)
T cd07378 2 RFLALGDWGGGGTAGQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSAPSLQVP--WYLVLGN 79 (277)
T ss_pred eEEEEeecCCCCCHHHHHHHHHHHHHHHhcCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccchhhcCC--eEEecCC
Confidence 56889997653 1 2333333 333335668899999987 5554221 22222222 222234 9999999
Q ss_pred cchh
Q psy13699 116 HESR 119 (308)
Q Consensus 116 HE~~ 119 (308)
||..
T Consensus 80 HD~~ 83 (277)
T cd07378 80 HDYS 83 (277)
T ss_pred cccC
Confidence 9975
No 94
>KOG3325|consensus
Probab=95.52 E-value=0.17 Score=42.24 Aligned_cols=120 Identities=24% Similarity=0.376 Sum_probs=80.6
Q ss_pred cceeccCCC--CHHHHHHHHHhcCCCCC-CcEEeccCeecCCCCcHHHHHHHHHhhhhCCCcEEEECCCcchhhhHhhhC
Q psy13699 50 VTVCGDIHG--QFYDLKELFKVGGDVPE-TNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYG 126 (308)
Q Consensus 50 i~viGDIHG--~~~~L~~ll~~~~~~~~-~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~g 126 (308)
+.++||+|= ...+|-.-|++.--|+. .+++++|++. |.|++++|..+. +.++++||--|.-
T Consensus 3 vL~lgD~HiP~Ra~~Lp~KFkklLvPgki~hilctGNlc-----s~e~~dylk~l~----~dvhiVrGeFD~~------- 66 (183)
T KOG3325|consen 3 VLVLGDLHIPHRANDLPAKFKKLLVPGKIQHILCTGNLC-----SKESYDYLKTLS----SDVHIVRGEFDEN------- 66 (183)
T ss_pred EEEeccccCCccccccCHHHHhccCCCceeEEEEeCCcc-----hHHHHHHHHhhC----CCcEEEecccCcc-------
Confidence 568999984 34455556665544443 5799999975 889999999887 6899999987642
Q ss_pred ChHHHHHHhCCchhhhhhhHHhhccccceeE---eCeEEEEcCCCCCCCCCHHHHHhhcccCCCCCCCcccccccCCCCC
Q psy13699 127 FYDECLRKYGSITVWRYCTEIFDYLSLSAII---DGRIFCVHGGLSPSIQTLDQIRTIDRKQEVPHDGPMCDLLWSDPED 203 (308)
Q Consensus 127 f~~e~~~~~~~~~~~~~~~~~~~~LPl~~~i---~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdP~~ 203 (308)
. ..|...++ .-++-||||-.- +=|.||.
T Consensus 67 ------~----------------~yP~~kvvtvGqfkIG~chGhqV--------------------------iP~gd~~- 97 (183)
T KOG3325|consen 67 ------L----------------KYPENKVVTVGQFKIGLCHGHQV--------------------------IPWGDPE- 97 (183)
T ss_pred ------c----------------cCCccceEEeccEEEEeecCcEe--------------------------ecCCCHH-
Confidence 1 22333333 347889998631 2266642
Q ss_pred CCCCccCCCCCeeEeChhHHHhhhhhcCceEEEeecccccCCceeecCCee
Q psy13699 204 TQGWGVSPRGAGYLFGSDVVASFNAANNIDMICRAHQLVMEGYKWHFNETV 254 (308)
Q Consensus 204 ~~~~~~~~rg~g~~fg~~~~~~fl~~~~l~~iirgH~~~~~G~~~~~~~~~ 254 (308)
.+.-.-++.+++.++-||+...+.|+ ++|+.
T Consensus 98 ------------------sL~~LaRqldvDILl~G~Th~f~Aye--~eg~f 128 (183)
T KOG3325|consen 98 ------------------SLALLARQLDVDILLTGHTHKFEAYE--HEGKF 128 (183)
T ss_pred ------------------HHHHHHHhcCCcEEEeCCceeEEEEE--eCCcE
Confidence 34445566788999999987766554 45554
No 95
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=94.92 E-value=0.033 Score=50.68 Aligned_cols=65 Identities=22% Similarity=0.202 Sum_probs=41.4
Q ss_pred CcceeccCCCCH----------HHHHHHHHhcCCCCCCcEEeccCeecCCCCc-----HHHHHHHHHhhhhCCCcEEEEC
Q psy13699 49 PVTVCGDIHGQF----------YDLKELFKVGGDVPETNYLFMGDFVDRGFYS-----VETFLLLLALKVRYPDRITLIR 113 (308)
Q Consensus 49 ~i~viGDIHG~~----------~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s-----~evl~~l~~lk~~~p~~v~~lr 113 (308)
++..++|+||++ ..+..+++.....+.+-++..||.++..+.+ ..++..+..+.. .+ +..
T Consensus 2 ~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln~~g~----d~-~~~ 76 (257)
T cd07408 2 TILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPISDLDKGETIIKIMNAVGY----DA-VTP 76 (257)
T ss_pred EEEEeccCcccccCCCCccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchhhhhcCCcHHHHHHHhcCC----cE-Ecc
Confidence 467899999985 3455566554333556788899999876643 234444444431 33 456
Q ss_pred CCcch
Q psy13699 114 GNHES 118 (308)
Q Consensus 114 GNHE~ 118 (308)
||||.
T Consensus 77 GNHef 81 (257)
T cd07408 77 GNHEF 81 (257)
T ss_pred ccccc
Confidence 99995
No 96
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=94.19 E-value=0.12 Score=46.48 Aligned_cols=72 Identities=19% Similarity=0.205 Sum_probs=46.8
Q ss_pred ecCCcceeccCCCCHHHHH----------------HHHH-hcCCCCCCcEEeccCeecCCCC-----cHHHHHHHHHhhh
Q psy13699 46 IDSPVTVCGDIHGQFYDLK----------------ELFK-VGGDVPETNYLFMGDFVDRGFY-----SVETFLLLLALKV 103 (308)
Q Consensus 46 ~~~~i~viGDIHG~~~~L~----------------~ll~-~~~~~~~~~~vfLGD~vDrG~~-----s~evl~~l~~lk~ 103 (308)
...+..||+|+|=-+.... +.+. .......+++|.+||.-.-.+. ..++-.++..++.
T Consensus 18 ~~~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~~ 97 (235)
T COG1407 18 PLGRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEFGKSLRQEKEEVREFLELLDE 97 (235)
T ss_pred ccCcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCccccccCccccccHHHHHHHHHHhcc
Confidence 3578999999996555432 2222 2233467899999999644333 3455555555553
Q ss_pred hCCCcEEEECCCcchhh
Q psy13699 104 RYPDRITLIRGNHESRQ 120 (308)
Q Consensus 104 ~~p~~v~~lrGNHE~~~ 120 (308)
. .+++++||||...
T Consensus 98 ~---evi~i~GNHD~~i 111 (235)
T COG1407 98 R---EVIIIRGNHDNGI 111 (235)
T ss_pred C---cEEEEeccCCCcc
Confidence 2 4999999999643
No 97
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=94.17 E-value=1.5 Score=40.10 Aligned_cols=49 Identities=16% Similarity=0.142 Sum_probs=28.8
Q ss_pred EEEeecccccCCceeec--CCeeEEEEeCCCCCccCCCcEEEEEEc-CCCeeEEEEE
Q psy13699 234 MICRAHQLVMEGYKWHF--NETVLTVWSAPNYCYRCGNVAAILELN-ENLQREFTIF 287 (308)
Q Consensus 234 ~iirgH~~~~~G~~~~~--~~~~iTifSa~~y~~~~~n~~avl~i~-~~~~~~~~~~ 287 (308)
..+-|||+. -|.+... +++-+.+.|.|.|.. .|.++.++ +++++..+.|
T Consensus 206 Vyf~Gnq~~-f~t~~~~~~~~~~v~lv~vP~Fs~----t~~~vlvdl~tLe~~~v~f 257 (257)
T cd07387 206 VYFAGNQPK-FGTKLVEGEEGQRVLLVCVPSFSK----TGTAVLVNLRTLECEPISF 257 (257)
T ss_pred EEEeCCCcc-eeeeEEEcCCCCeEEEEEeCCcCc----CCEEEEEECCcCcEEEEeC
Confidence 467799874 3444332 255667777788853 45555565 4566655543
No 98
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=93.96 E-value=0.057 Score=50.12 Aligned_cols=65 Identities=25% Similarity=0.355 Sum_probs=42.5
Q ss_pred CcceeccCCCCHHH--------------HHHHHHhcCC-CCCCcEEeccCeecCCCC-c-----HHHHHHHHHhhhhCCC
Q psy13699 49 PVTVCGDIHGQFYD--------------LKELFKVGGD-VPETNYLFMGDFVDRGFY-S-----VETFLLLLALKVRYPD 107 (308)
Q Consensus 49 ~i~viGDIHG~~~~--------------L~~ll~~~~~-~~~~~~vfLGD~vDrG~~-s-----~evl~~l~~lk~~~p~ 107 (308)
++..+.|+||++.. +..+++.... .+..-++..||+++..+. + ..++..+.++..
T Consensus 2 ~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~~g~---- 77 (288)
T cd07412 2 QILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESALLQDEPTIEALNAMGV---- 77 (288)
T ss_pred eEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhcccCCcHHHHHHhhCC----
Confidence 46789999998553 5556655432 344567789999977654 2 245666666653
Q ss_pred cEEEECCCcch
Q psy13699 108 RITLIRGNHES 118 (308)
Q Consensus 108 ~v~~lrGNHE~ 118 (308)
. .+..||||.
T Consensus 78 D-a~t~GNHef 87 (288)
T cd07412 78 D-ASAVGNHEF 87 (288)
T ss_pred e-eeeeccccc
Confidence 2 455699995
No 99
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=93.49 E-value=0.093 Score=47.94 Aligned_cols=64 Identities=22% Similarity=0.152 Sum_probs=37.3
Q ss_pred cceeccCCCCHH----------------------HHHHHHHhcCCC-CCCcE-EeccCeecCCCCc-----HHHHHHHHH
Q psy13699 50 VTVCGDIHGQFY----------------------DLKELFKVGGDV-PETNY-LFMGDFVDRGFYS-----VETFLLLLA 100 (308)
Q Consensus 50 i~viGDIHG~~~----------------------~L~~ll~~~~~~-~~~~~-vfLGD~vDrG~~s-----~evl~~l~~ 100 (308)
+..++|+||++. .+..+++..... ..+.+ +..||+++..+.+ ..++..+..
T Consensus 3 il~t~D~Hg~~~~~~~~~~~~~~~~~~~~~gG~~r~~~~v~~~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~l~~ 82 (264)
T cd07411 3 LLHINDLHGQLIPHYELEPSNLLARVFGMAGGFAHIATLIKRIRAERNPNTLLLDGGDTWQGSGEALYTRGQAMVDALNA 82 (264)
T ss_pred EEEEcccccCccccccccccccccccccccCcHHHHHHHHHHHHHhcCCCeEEEeCCCccCCChHHhhcCChhHHHHHHh
Confidence 566788888743 344455544322 33444 5699999887643 244555555
Q ss_pred hhhhCCCcEEEECCCcchh
Q psy13699 101 LKVRYPDRITLIRGNHESR 119 (308)
Q Consensus 101 lk~~~p~~v~~lrGNHE~~ 119 (308)
+. -. .+. ||||..
T Consensus 83 ~g----~d-a~~-GNHefd 95 (264)
T cd07411 83 LG----VD-AMV-GHWEFT 95 (264)
T ss_pred hC----Ce-EEe-cccccc
Confidence 43 22 344 999953
No 100
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=93.09 E-value=0.17 Score=46.86 Aligned_cols=73 Identities=23% Similarity=0.274 Sum_probs=43.4
Q ss_pred CcceeccCCCC--HHHHHHHHHhcCC--CCCCcEEeccCeecCCCCcH--H------HHHHHHHhhhhCCC-cEEEECCC
Q psy13699 49 PVTVCGDIHGQ--FYDLKELFKVGGD--VPETNYLFMGDFVDRGFYSV--E------TFLLLLALKVRYPD-RITLIRGN 115 (308)
Q Consensus 49 ~i~viGDIHG~--~~~L~~ll~~~~~--~~~~~~vfLGD~vDrG~~s~--e------vl~~l~~lk~~~p~-~v~~lrGN 115 (308)
+..-.|+-.-+ ...+..+++.+.. ++.+-+|+.||+++.+.... + .-.+...++..+|. .++.+.||
T Consensus 39 ~~~~~G~~~CD~p~~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GN 118 (296)
T cd00842 39 PAGPWGDYGCDSPWRLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGN 118 (296)
T ss_pred CCCCCcCcCCCCcHHHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCC
Confidence 34456665432 2345556654433 46788999999998876431 1 12223334433333 59999999
Q ss_pred cchhhh
Q psy13699 116 HESRQI 121 (308)
Q Consensus 116 HE~~~~ 121 (308)
||....
T Consensus 119 HD~~p~ 124 (296)
T cd00842 119 HDSYPV 124 (296)
T ss_pred CCCCcc
Confidence 998643
No 101
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=92.94 E-value=0.2 Score=46.31 Aligned_cols=65 Identities=22% Similarity=0.258 Sum_probs=38.7
Q ss_pred CcceeccCCCCH---------------------HHHHHHHHhcCC-CCCCcEEeccCeecCCCC-----cHHHHHHHHHh
Q psy13699 49 PVTVCGDIHGQF---------------------YDLKELFKVGGD-VPETNYLFMGDFVDRGFY-----SVETFLLLLAL 101 (308)
Q Consensus 49 ~i~viGDIHG~~---------------------~~L~~ll~~~~~-~~~~~~vfLGD~vDrG~~-----s~evl~~l~~l 101 (308)
++..++|+||++ ..+..+++.... .+..-++..||+++..+. ...+++.+..+
T Consensus 2 ~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~~ 81 (281)
T cd07409 2 TILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRAENPNVLFLNAGDAFQGTLWYTLYKGNADAEFMNLL 81 (281)
T ss_pred EEEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHhcCCCEEEEeCCCCCCCcchhhhcCChHHHHHHHhc
Confidence 366788999875 344555554432 233345558999987653 23455555554
Q ss_pred hhhCCCcEEEECCCcch
Q psy13699 102 KVRYPDRITLIRGNHES 118 (308)
Q Consensus 102 k~~~p~~v~~lrGNHE~ 118 (308)
.. .+ +..||||.
T Consensus 82 g~----D~-~~lGNHef 93 (281)
T cd07409 82 GY----DA-MTLGNHEF 93 (281)
T ss_pred CC----CE-EEeccccc
Confidence 42 23 44599995
No 102
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=92.69 E-value=0.19 Score=43.43 Aligned_cols=45 Identities=31% Similarity=0.332 Sum_probs=30.5
Q ss_pred CCCCcEEeccCee--cCCCCcHHHHHHHHHhhhhCCCcEEEECCCcchhhh
Q psy13699 73 VPETNYLFMGDFV--DRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQI 121 (308)
Q Consensus 73 ~~~~~~vfLGD~v--DrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~ 121 (308)
.+.|.++.-||+- =|=+...+=+.++-.| |..=+++|||||+..-
T Consensus 42 ~~eDiVllpGDiSWaM~l~ea~~Dl~~i~~L----PG~K~m~rGNHDYWw~ 88 (230)
T COG1768 42 SPEDIVLLPGDISWAMRLEEAEEDLRFIGDL----PGTKYMIRGNHDYWWS 88 (230)
T ss_pred ChhhEEEecccchhheechhhhhhhhhhhcC----CCcEEEEecCCccccc
Confidence 4567788899984 2333444455555444 6788999999998643
No 103
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=92.46 E-value=0.13 Score=56.85 Aligned_cols=66 Identities=20% Similarity=0.246 Sum_probs=42.4
Q ss_pred CCcceeccCCCCH---HHHHHHHHhcCCCCCCcEEe-ccCeecCCCCc-----HHHHHHHHHhhhhCCCcEEEECCCcch
Q psy13699 48 SPVTVCGDIHGQF---YDLKELFKVGGDVPETNYLF-MGDFVDRGFYS-----VETFLLLLALKVRYPDRITLIRGNHES 118 (308)
Q Consensus 48 ~~i~viGDIHG~~---~~L~~ll~~~~~~~~~~~vf-LGD~vDrG~~s-----~evl~~l~~lk~~~p~~v~~lrGNHE~ 118 (308)
.+|+.++|+||.+ ..+..+++.......+.+++ .||+++..+.+ ..+++.+..+.. -++..||||.
T Consensus 661 l~Il~~nD~Hg~l~g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~lg~-----d~~~~GNHEf 735 (1163)
T PRK09419 661 LTILHTNDFHGHLDGAAKRVTKIKEVKEENPNTILVDAGDVYQGSLYSNLLKGLPVLKMMKEMGY-----DASTFGNHEF 735 (1163)
T ss_pred EEEEEEeecccCCCCHHHHHHHHHHHHhhCCCeEEEecCCCCCCcchhhhcCChHHHHHHhCcCC-----CEEEeccccc
Confidence 4588999999985 34445555443323344444 89999887644 345666655542 3568999996
No 104
>KOG2863|consensus
Probab=92.20 E-value=0.16 Score=48.25 Aligned_cols=73 Identities=25% Similarity=0.338 Sum_probs=47.6
Q ss_pred CCcceeccCCCCHHHHHH---HHHhcCCCCCCcEEeccCee-cCCCC---cHHHH-------HH--HHHhhhhCCCcEEE
Q psy13699 48 SPVTVCGDIHGQFYDLKE---LFKVGGDVPETNYLFMGDFV-DRGFY---SVETF-------LL--LLALKVRYPDRITL 111 (308)
Q Consensus 48 ~~i~viGDIHG~~~~L~~---ll~~~~~~~~~~~vfLGD~v-DrG~~---s~evl-------~~--l~~lk~~~p~~v~~ 111 (308)
|||.|-|=-||.++.+-+ ..++.|..+.|.++++||+= =|... ++.|= .+ -..=...+|---++
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIF 80 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIF 80 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEE
Confidence 689999999999998763 44666777899999999983 12221 11111 11 11112345655688
Q ss_pred ECCCcchhh
Q psy13699 112 IRGNHESRQ 120 (308)
Q Consensus 112 lrGNHE~~~ 120 (308)
|-||||.+.
T Consensus 81 IGGNHEAsn 89 (456)
T KOG2863|consen 81 IGGNHEASN 89 (456)
T ss_pred ecCchHHHH
Confidence 999999864
No 105
>KOG3662|consensus
Probab=92.10 E-value=0.31 Score=47.31 Aligned_cols=47 Identities=23% Similarity=0.393 Sum_probs=35.2
Q ss_pred CCCCCcEEeccCeecCCCCc--HHHHHHHHHhhhhCCC----cEEEECCCcch
Q psy13699 72 DVPETNYLFMGDFVDRGFYS--VETFLLLLALKVRYPD----RITLIRGNHES 118 (308)
Q Consensus 72 ~~~~~~~vfLGD~vDrG~~s--~evl~~l~~lk~~~p~----~v~~lrGNHE~ 118 (308)
.-..+-++||||++|-|... -|=-....+++..+|. .+..+.||||-
T Consensus 91 ~lkPdvvffLGDLfDeG~~~~~eEf~~~~~RfkkIf~~k~~~~~~~i~GNhDI 143 (410)
T KOG3662|consen 91 RLKPDVVFFLGDLFDEGQWAGDEEFKKRYERFKKIFGRKGNIKVIYIAGNHDI 143 (410)
T ss_pred ccCCCEEEEeccccccCccCChHHHHHHHHHHHHhhCCCCCCeeEEeCCcccc
Confidence 44678899999999988854 3445556666666654 78999999994
No 106
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=91.76 E-value=9.6 Score=37.84 Aligned_cols=203 Identities=16% Similarity=0.197 Sum_probs=97.3
Q ss_pred CcceeccCCC-CHHHHHH----HHHhcCCC----CC-CcEEeccCeecC-CC-----------CcHHHHHHHHHhhhhCC
Q psy13699 49 PVTVCGDIHG-QFYDLKE----LFKVGGDV----PE-TNYLFMGDFVDR-GF-----------YSVETFLLLLALKVRYP 106 (308)
Q Consensus 49 ~i~viGDIHG-~~~~L~~----ll~~~~~~----~~-~~~vfLGD~vDr-G~-----------~s~evl~~l~~lk~~~p 106 (308)
.++.++|+|= ...-+.. .++-+..+ +. ..++..||.||. |- +..+-.+.+..+-.+-|
T Consensus 227 ~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~L~~vp 306 (481)
T COG1311 227 YVALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEFLDQVP 306 (481)
T ss_pred EEEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHHHHHHHhhCC
Confidence 4899999995 3332322 22222211 22 345668899994 21 12233344444444445
Q ss_pred C--cEEEECCCcchhhhHhhhCChHHHHHHhCCchhhhhhhHHhhccccceeE---eCeEEEEcCCCCCCCCCHHHHHhh
Q psy13699 107 D--RITLIRGNHESRQITQVYGFYDECLRKYGSITVWRYCTEIFDYLSLSAII---DGRIFCVHGGLSPSIQTLDQIRTI 181 (308)
Q Consensus 107 ~--~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~LPl~~~i---~~~~l~vHgGi~p~~~~~~~i~~i 181 (308)
. .+++.+||||..-....-....+..+ .++...+ +..++-.+++ +..++..||- +++++...
T Consensus 307 ~~I~v~i~PGnhDa~r~a~PQp~~~~~~k-----slf~~~n--~~~v~NP~~~~l~G~~vL~~hG~------sidDii~~ 373 (481)
T COG1311 307 EHIKVFIMPGNHDAVRQALPQPHFPELIK-----SLFSLNN--LLFVSNPALVSLHGVDVLIYHGR------SIDDIIKL 373 (481)
T ss_pred CCceEEEecCCCCccccccCCCCcchhhc-----ccccccc--eEecCCCcEEEECCEEEEEecCC------CHHHHHhh
Confidence 4 67999999998654332222222211 1111111 2222222232 4568888874 45554332
Q ss_pred -cccC-CCCC------------CCcccccccCCCCCCCCCccCCCCCeeEeChhHHHhhhhhcCceEEEeecccccCCce
Q psy13699 182 -DRKQ-EVPH------------DGPMCDLLWSDPEDTQGWGVSPRGAGYLFGSDVVASFNAANNIDMICRAHQLVMEGYK 247 (308)
Q Consensus 182 -~r~~-~~~~------------~~~~~dllWsdP~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~l~~iirgH~~~~~G~~ 247 (308)
++.. +.+. .+...+-+|.-|...+.+. =.---+.++-||+.. .|+.
T Consensus 374 vP~~~~~~~~~ame~lLk~rHlaPtygg~~p~aP~~kD~lV-------------------IeevPDv~~~Ghvh~-~g~~ 433 (481)
T COG1311 374 VPGADYDSPLKAMEELLKRRHLAPTYGGTLPIAPETKDYLV-------------------IEEVPDVFHTGHVHK-FGTG 433 (481)
T ss_pred CCCCCccchHHHHHHHHHhcccCCCCCCccccccCCcCcee-------------------eccCCcEEEEccccc-ccee
Confidence 2210 0111 1233445555544211110 011235578899986 6888
Q ss_pred eecCCeeEEEEeCCCCCccCCCcEEEEEEcCC-CeeEEEEEe
Q psy13699 248 WHFNETVLTVWSAPNYCYRCGNVAAILELNEN-LQREFTIFE 288 (308)
Q Consensus 248 ~~~~~~~iTifSa~~y~~~~~n~~avl~i~~~-~~~~~~~~~ 288 (308)
.+.+.+++..++=+.... ..-++.|+.. ++..+..+.
T Consensus 434 ~y~gv~~vns~T~q~qTe----fqk~vni~p~~~~v~vv~~~ 471 (481)
T COG1311 434 VYEGVNLVNSGTWQEQTE----FQKMVNINPTPGNVPVVDFD 471 (481)
T ss_pred EEeccceEEeeeecchhc----cceEEEecCcccceeEEecc
Confidence 777767777766555532 2344555433 344444443
No 107
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=91.66 E-value=0.27 Score=44.74 Aligned_cols=56 Identities=30% Similarity=0.272 Sum_probs=36.9
Q ss_pred CCHHHHHHHHHhcCCC-CCCcEEeccCeecCCCC-----cHHHHHHHHHhhhhCCCcEEEECCCcch
Q psy13699 58 GQFYDLKELFKVGGDV-PETNYLFMGDFVDRGFY-----SVETFLLLLALKVRYPDRITLIRGNHES 118 (308)
Q Consensus 58 G~~~~L~~ll~~~~~~-~~~~~vfLGD~vDrG~~-----s~evl~~l~~lk~~~p~~v~~lrGNHE~ 118 (308)
|.+..+..+++..... ++.-++..||+++.++. ...++..+..+.. -+...||||.
T Consensus 21 gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l~~l~~-----d~~~~GNHef 82 (257)
T cd07406 21 GGAARFATLRKQLRKENPNTLVLFSGDVLSPSLLSTATKGKQMVPVLNALGV-----DLACFGNHEF 82 (257)
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEECCCccCCccchhhcCCccHHHHHHhcCC-----cEEeeccccc
Confidence 4466777777655433 34467789999987753 2456666666542 3567899996
No 108
>KOG0918|consensus
Probab=90.78 E-value=0.023 Score=54.35 Aligned_cols=195 Identities=14% Similarity=-0.032 Sum_probs=112.5
Q ss_pred CCcEEeccCeecCCCCcHHHHHHHHHhhhhCCCcEEEECCCcchhhhHhhhCChHHHHHHh---CCchhhhhhhHHhhcc
Q psy13699 75 ETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKY---GSITVWRYCTEIFDYL 151 (308)
Q Consensus 75 ~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~---~~~~~~~~~~~~~~~L 151 (308)
.-..|+++++.+++.+.++.+.+-...++.+-.+.-.+++||+.. +++..++...- +...+++..++-++..
T Consensus 48 ~latVdvdp~s~t~c~vI~r~~~~~~gdelhhsgwn~~ssc~~~~-----~~~R~~LVlp~l~S~riyvid~~~ep~~~~ 122 (476)
T KOG0918|consen 48 YLATVDVDPSSPTYCQVIHRLPMPYLGDELHHSGWNSCSSCHGDS-----SFKRRYLVLPSLNSGRIYVIDVKTEPRKPS 122 (476)
T ss_pred ceeEEecCCCCCcceeeEEEeccCcccchhcccchhhhhhhccCc-----chhhhheeecccccCceEEEEeccCcCccc
Confidence 346899999999999999999998888888888888999999543 22332222111 2245667788888888
Q ss_pred ccceeEeCeEEEEcCCCCCCCCCHHHHHhhcccCCCCCCC---cccccccCCCCCCCCCccCCCCCeeEeChh--HHHhh
Q psy13699 152 SLSAIIDGRIFCVHGGLSPSIQTLDQIRTIDRKQEVPHDG---PMCDLLWSDPEDTQGWGVSPRGAGYLFGSD--VVASF 226 (308)
Q Consensus 152 Pl~~~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~---~~~dllWsdP~~~~~~~~~~rg~g~~fg~~--~~~~f 226 (308)
+.+.+.+ +++|.||+..|.......+.++.-..--..++ .-..++=++-.....|.... ...+||.+ ..-++
T Consensus 123 l~k~i~~-~il~~~~l~~Pht~hcla~g~v~vs~lGd~~gn~kg~f~llD~~~~~k~tw~~~~--~~p~~gyDfwyqpr~ 199 (476)
T KOG0918|consen 123 LEKTIDP-DILEKTGLACPHTSHCLASGNVMVSCLGDAEGNAKGGFLLLDSDFNEKGTWEKPG--HSPLFGYDFWYQPRH 199 (476)
T ss_pred eeeeech-hhHhhcCCcCCcccccccCCCeeEEeecccccCCcCCeEEecCccceecccccCC--Cccccccceeecccc
Confidence 8866666 99999999999875443333222110000000 01122212211112343222 22222222 22233
Q ss_pred hhhcCceEEEeecccccCCceeecCCeeEEEEeCCCCCccCCCcEEEEEEcCC
Q psy13699 227 NAANNIDMICRAHQLVMEGYKWHFNETVLTVWSAPNYCYRCGNVAAILELNEN 279 (308)
Q Consensus 227 l~~~~l~~iirgH~~~~~G~~~~~~~~~iTifSa~~y~~~~~n~~avl~i~~~ 279 (308)
+.....+...+.|.. .||.+.+=....+.+++.-|.-..++..+.+.+..+
T Consensus 200 ~~mIstewgap~~~~--~gf~~~~v~d~lyg~~lhvy~w~~~~~~QtidL~~~ 250 (476)
T KOG0918|consen 200 NVMISTEWGAPNALR--KGFNPADVEDGLYGSHLHVYQWSPGELKQTIDLGDT 250 (476)
T ss_pred ceEEeecccCchhhh--cCCChhHhhccceeeeeEEEecCCccceeEEecCCC
Confidence 444455556666664 455543322226777777776556677777777765
No 109
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=90.73 E-value=0.43 Score=43.93 Aligned_cols=67 Identities=16% Similarity=0.129 Sum_probs=49.0
Q ss_pred CCcceeccCCCC--HHHHHHHHHhcC-CCCCCcEEeccCeecCC-CCcHHHHHHHHHhhhhCCCcEEEECCCcchh
Q psy13699 48 SPVTVCGDIHGQ--FYDLKELFKVGG-DVPETNYLFMGDFVDRG-FYSVETFLLLLALKVRYPDRITLIRGNHESR 119 (308)
Q Consensus 48 ~~i~viGDIHG~--~~~L~~ll~~~~-~~~~~~~vfLGD~vDrG-~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 119 (308)
|++.++|||=|. ...+...|..+. ..+.|-+|..||...-| .-+-++.+.|..+.. .++.+ |||+.-
T Consensus 1 m~ilfiGDi~G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~gG~Gi~~~~~~~L~~~Gv----DviT~-GNH~~D 71 (266)
T TIGR00282 1 IKFLFIGDVYGKAGRKIVKNNLPQLKSKYQADLVIANGENTTHGKGLTLKIYEFLKQSGV----NYITM-GNHTWF 71 (266)
T ss_pred CeEEEEEecCCHHHHHHHHHHHHHHHHhCCCCEEEEcCcccCCCCCCCHHHHHHHHhcCC----CEEEc-cchhcc
Confidence 689999999999 455666665543 23457788889998665 456788888887764 46665 999963
No 110
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=88.31 E-value=0.52 Score=43.68 Aligned_cols=66 Identities=21% Similarity=0.124 Sum_probs=38.1
Q ss_pred CcceeccCCCCHHH----------HHHHHHhcCC-----CCCCcEEeccCeecCCCC-----cHHHHHHHHHhhhhCCCc
Q psy13699 49 PVTVCGDIHGQFYD----------LKELFKVGGD-----VPETNYLFMGDFVDRGFY-----SVETFLLLLALKVRYPDR 108 (308)
Q Consensus 49 ~i~viGDIHG~~~~----------L~~ll~~~~~-----~~~~~~vfLGD~vDrG~~-----s~evl~~l~~lk~~~p~~ 108 (308)
.|+.+.|+||++.. +..+++.... .+..-++-.||.+...+. ...+++.+.++.. .
T Consensus 2 tIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~~~~~~~g~~~~~~~n~~g~----D 77 (285)
T cd07405 2 TILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVPESDLQDAEPDFRGMNLVGY----D 77 (285)
T ss_pred EEEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCchhHHhcCcchHHHHHHhhCC----c
Confidence 36778999998533 3444443221 334456679999843332 2335556666553 2
Q ss_pred EEEECCCcchh
Q psy13699 109 ITLIRGNHESR 119 (308)
Q Consensus 109 v~~lrGNHE~~ 119 (308)
+ ...||||.-
T Consensus 78 a-~~~GNHEfD 87 (285)
T cd07405 78 A-MAVGNHEFD 87 (285)
T ss_pred E-Eeecccccc
Confidence 3 445999953
No 111
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=87.31 E-value=0.36 Score=47.27 Aligned_cols=43 Identities=23% Similarity=0.373 Sum_probs=35.8
Q ss_pred CCCcEEeccCeecCCCCcHHHHHHHHHhhhhCCCcEEEECCCcchhhh
Q psy13699 74 PETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQI 121 (308)
Q Consensus 74 ~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~ 121 (308)
-.|++-.+||+-||||++-.+++-|..+- .+-+-.||||-.++
T Consensus 190 vVDhLHiVGDIyDRGP~pd~Imd~L~~yh-----svDiQWGNHDilWm 232 (648)
T COG3855 190 VVDHLHIVGDIYDRGPYPDKIMDTLINYH-----SVDIQWGNHDILWM 232 (648)
T ss_pred hhhheeeecccccCCCCchHHHHHHhhcc-----cccccccCcceEEe
Confidence 35788899999999999999999987764 57788999996543
No 112
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=87.17 E-value=0.63 Score=43.15 Aligned_cols=67 Identities=18% Similarity=0.109 Sum_probs=39.4
Q ss_pred CCcceeccCCCCHHH-------------HHHH---HHh-cCC-CCCCcEEeccCeecCCCCc-------HHHHHHHHHhh
Q psy13699 48 SPVTVCGDIHGQFYD-------------LKEL---FKV-GGD-VPETNYLFMGDFVDRGFYS-------VETFLLLLALK 102 (308)
Q Consensus 48 ~~i~viGDIHG~~~~-------------L~~l---l~~-~~~-~~~~~~vfLGD~vDrG~~s-------~evl~~l~~lk 102 (308)
.+|.-+.|+||++.. +.++ ++. ... .+..-++..||.++.-+.+ .-+++++-.+.
T Consensus 6 ltILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~~mN~mg 85 (282)
T cd07407 6 INFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASPPPGSYSNPIFRMMP 85 (282)
T ss_pred EEEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeecCCChHHHHHHHhcC
Confidence 357888999998641 2233 222 111 2333456699998765432 23455555554
Q ss_pred hhCCCcEEEECCCcchh
Q psy13699 103 VRYPDRITLIRGNHESR 119 (308)
Q Consensus 103 ~~~p~~v~~lrGNHE~~ 119 (308)
.-.+..||||.-
T Consensus 86 -----yDa~tlGNHEFd 97 (282)
T cd07407 86 -----YDLLTIGNHELY 97 (282)
T ss_pred -----CcEEeecccccC
Confidence 346788999973
No 113
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=86.11 E-value=0.89 Score=39.70 Aligned_cols=72 Identities=14% Similarity=0.163 Sum_probs=39.8
Q ss_pred cceeccCCCC-----HHHHHHHHHhcC-CCCCCcEEeccCeecCCCCcH----------HHHHHHHHhhhh-----CCCc
Q psy13699 50 VTVCGDIHGQ-----FYDLKELFKVGG-DVPETNYLFMGDFVDRGFYSV----------ETFLLLLALKVR-----YPDR 108 (308)
Q Consensus 50 i~viGDIHG~-----~~~L~~ll~~~~-~~~~~~~vfLGD~vDrG~~s~----------evl~~l~~lk~~-----~p~~ 108 (308)
|++++|+|=. ++.|..+|+... ....+.+|++|+++|.-.... .....+..+... .--+
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPSTQ 80 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCSE
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhcccccE
Confidence 4567776654 556777787766 667789999999999632211 111122222211 1138
Q ss_pred EEEECCCcchhhh
Q psy13699 109 ITLIRGNHESRQI 121 (308)
Q Consensus 109 v~~lrGNHE~~~~ 121 (308)
++++.|+||-...
T Consensus 81 vvlvPg~~D~~~~ 93 (209)
T PF04042_consen 81 VVLVPGPNDPTSS 93 (209)
T ss_dssp EEEE--TTCTT-S
T ss_pred EEEeCCCcccccc
Confidence 9999999997543
No 114
>KOG1432|consensus
Probab=86.01 E-value=0.92 Score=42.98 Aligned_cols=72 Identities=18% Similarity=0.230 Sum_probs=42.0
Q ss_pred CCcceeccCCCCHH-----------------HHH--HHH-HhcCCCCCCcEEeccCeecCCCCcHH---HHHHHHHhhhh
Q psy13699 48 SPVTVCGDIHGQFY-----------------DLK--ELF-KVGGDVPETNYLFMGDFVDRGFYSVE---TFLLLLALKVR 104 (308)
Q Consensus 48 ~~i~viGDIHG~~~-----------------~L~--~ll-~~~~~~~~~~~vfLGD~vDrG~~s~e---vl~~l~~lk~~ 104 (308)
-+|+.+.|+|=... |+. ..+ +.+.....|.+||+||.|+. ..... ++....+-.+.
T Consensus 54 fKIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~sE~PDlVVfTGD~i~g-~~t~Da~~sl~kAvaP~I~ 132 (379)
T KOG1432|consen 54 FKILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLASEKPDLVVFTGDNIFG-HSTQDAATSLMKAVAPAID 132 (379)
T ss_pred eEEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHhccCCCEEEEeCCcccc-cccHhHHHHHHHHhhhHhh
Confidence 35888999995444 111 111 22334567899999999976 33333 33333332233
Q ss_pred CCCcEEEECCCcchhh
Q psy13699 105 YPDRITLIRGNHESRQ 120 (308)
Q Consensus 105 ~p~~v~~lrGNHE~~~ 120 (308)
+.=-..++.||||...
T Consensus 133 ~~IPwA~~lGNHDdes 148 (379)
T KOG1432|consen 133 RKIPWAAVLGNHDDES 148 (379)
T ss_pred cCCCeEEEeccccccc
Confidence 3223678999999854
No 115
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=85.78 E-value=1.1 Score=42.21 Aligned_cols=64 Identities=27% Similarity=0.254 Sum_probs=40.9
Q ss_pred cceeccCCCCHH------HHHHHHHhcCC-----CCCCcEEeccCeecCCCC-------------cHHHHHHHHHhhhhC
Q psy13699 50 VTVCGDIHGQFY------DLKELFKVGGD-----VPETNYLFMGDFVDRGFY-------------SVETFLLLLALKVRY 105 (308)
Q Consensus 50 i~viGDIHG~~~------~L~~ll~~~~~-----~~~~~~vfLGD~vDrG~~-------------s~evl~~l~~lk~~~ 105 (308)
|+-+.|+||++. .+..+++.... .+..-++..||.+..++. ...+++++-++..
T Consensus 3 IlhtnD~Hg~~~~~gg~ar~a~~i~~~r~~~~~~~~~~l~ldaGD~~qGs~~~~~~~~~~~~~~~G~~~i~~mN~~g~-- 80 (313)
T cd08162 3 LLHTSDGESGLLAEDDAPNFSALVNALKDEAAAEYDNTLTLSSGDNFIPGPFFNASLDPLIYGDPGRADILILNALGV-- 80 (313)
T ss_pred EEEecccccCccccCCHHHHHHHHHHHHHhhhccCCCeEEEecCccccCchhhhhhccccccccCChHHHHHHhccCC--
Confidence 566889999963 34444443221 334567779998875543 3456666666663
Q ss_pred CCcEEEECCCcch
Q psy13699 106 PDRITLIRGNHES 118 (308)
Q Consensus 106 p~~v~~lrGNHE~ 118 (308)
=.+..||||.
T Consensus 81 ---Da~tlGNHEF 90 (313)
T cd08162 81 ---QAIALGNHEF 90 (313)
T ss_pred ---cEEecccccc
Confidence 3677999995
No 116
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=85.16 E-value=0.87 Score=45.76 Aligned_cols=69 Identities=26% Similarity=0.259 Sum_probs=45.3
Q ss_pred ecCCcceeccCCCCHH------------HHHH---HHHhcC-CCCCCcEEeccCeecCCC------CcHHHHHHHHHhhh
Q psy13699 46 IDSPVTVCGDIHGQFY------------DLKE---LFKVGG-DVPETNYLFMGDFVDRGF------YSVETFLLLLALKV 103 (308)
Q Consensus 46 ~~~~i~viGDIHG~~~------------~L~~---ll~~~~-~~~~~~~vfLGD~vDrG~------~s~evl~~l~~lk~ 103 (308)
.+.+|+-..|+||++. .+.+ +++... ..++..+|=.||+++..+ ....++.++-.++-
T Consensus 25 ~~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~~~~g~~~~~~mN~m~y 104 (517)
T COG0737 25 VKLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDYLTKGEPTVDLLNALGY 104 (517)
T ss_pred eeEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCccccccccCCChHHHHHhhcCC
Confidence 3457889999999998 3333 333322 223445666999998844 33457777777763
Q ss_pred hCCCcEEEECCCcchh
Q psy13699 104 RYPDRITLIRGNHESR 119 (308)
Q Consensus 104 ~~p~~v~~lrGNHE~~ 119 (308)
=..-.||||.-
T Consensus 105 -----Da~tiGNHEFd 115 (517)
T COG0737 105 -----DAMTLGNHEFD 115 (517)
T ss_pred -----cEEeecccccc
Confidence 35778999963
No 117
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=83.98 E-value=1.1 Score=49.74 Aligned_cols=67 Identities=24% Similarity=0.269 Sum_probs=40.9
Q ss_pred cCCcceeccCCCCHH----------------HHHHHHHhcCC-CCCCcEEeccCeecCCCC--------------cHHHH
Q psy13699 47 DSPVTVCGDIHGQFY----------------DLKELFKVGGD-VPETNYLFMGDFVDRGFY--------------SVETF 95 (308)
Q Consensus 47 ~~~i~viGDIHG~~~----------------~L~~ll~~~~~-~~~~~~vfLGD~vDrG~~--------------s~evl 95 (308)
..+|....|+||++. .+..+++.... .+..-++-.||.+...+- ...++
T Consensus 41 ~l~il~tnD~Hg~l~~~~y~~~~~~~~~Glar~at~i~~~r~~~~n~llld~GD~~qGs~l~~~~~~~~~~~~~~~~~~i 120 (1163)
T PRK09419 41 NIQILATTDLHGNFMDYDYASDKETTGFGLAQTATLIKKARKENPNTLLVDNGDLIQGNPLGEYAVKDNILFKNKTHPMI 120 (1163)
T ss_pred EEEEEEEecccccccccccccCCCCCCcCHHHHHHHHHHHHHhCCCeEEEeCCCccCCChhhhHHhhhccccCCCcCHHH
Confidence 456899999999863 33444544332 233344459999976651 12355
Q ss_pred HHHHHhhhhCCCcEEEECCCcch
Q psy13699 96 LLLLALKVRYPDRITLIRGNHES 118 (308)
Q Consensus 96 ~~l~~lk~~~p~~v~~lrGNHE~ 118 (308)
..+-.+. .-....||||.
T Consensus 121 ~~mN~lg-----yDa~~lGNHEF 138 (1163)
T PRK09419 121 KAMNALG-----YDAGTLGNHEF 138 (1163)
T ss_pred HHHhhcC-----ccEEeeccccc
Confidence 5555554 23567999996
No 118
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=83.57 E-value=1.2 Score=46.33 Aligned_cols=69 Identities=19% Similarity=0.228 Sum_probs=44.9
Q ss_pred eecCCcceeccCCCCHHH----------------HHHHHHhcC-CCCCCcEEeccCeecCCCCcH-------------HH
Q psy13699 45 RIDSPVTVCGDIHGQFYD----------------LKELFKVGG-DVPETNYLFMGDFVDRGFYSV-------------ET 94 (308)
Q Consensus 45 ~~~~~i~viGDIHG~~~~----------------L~~ll~~~~-~~~~~~~vfLGD~vDrG~~s~-------------ev 94 (308)
.+..+|.-..|+||++.. +..+++... ..+..-+|-.||.+...+.+- -+
T Consensus 23 ~~~L~IL~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~llvD~GD~~qGsp~~~~~~~~~~~~g~~~p~ 102 (649)
T PRK09420 23 TVDLRIMETTDLHSNMMDFDYYKDKPTEKFGLVRTASLIKAARAEAKNSVLVDNGDLIQGSPLGDYMAAKGLKAGDVHPV 102 (649)
T ss_pred CceEEEEEEcccccCccCCccccCCcccccCHHHHHHHHHHHHHhCCCEEEEECCCcCCCchhhhhhhhccccCCCcchH
Confidence 346778999999999742 334444432 224456777999997665431 25
Q ss_pred HHHHHHhhhhCCCcEEEECCCcch
Q psy13699 95 FLLLLALKVRYPDRITLIRGNHES 118 (308)
Q Consensus 95 l~~l~~lk~~~p~~v~~lrGNHE~ 118 (308)
+..+-.+. .-....||||.
T Consensus 103 i~amN~lg-----yDa~tlGNHEF 121 (649)
T PRK09420 103 YKAMNTLD-----YDVGNLGNHEF 121 (649)
T ss_pred HHHHHhcC-----CcEEeccchhh
Confidence 66666665 34678899995
No 119
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=83.31 E-value=1.2 Score=46.10 Aligned_cols=66 Identities=21% Similarity=0.199 Sum_probs=41.6
Q ss_pred CCcceeccCCCCHHH----------------HHHHHHhcCC-CCCCcEEeccCeecCCCCc-------------HHHHHH
Q psy13699 48 SPVTVCGDIHGQFYD----------------LKELFKVGGD-VPETNYLFMGDFVDRGFYS-------------VETFLL 97 (308)
Q Consensus 48 ~~i~viGDIHG~~~~----------------L~~ll~~~~~-~~~~~~vfLGD~vDrG~~s-------------~evl~~ 97 (308)
.+|.-..|+||++.. +..+++.... .+..-++-.||.+...+.+ .-++..
T Consensus 3 l~Il~TnDlH~~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~lllD~GD~~qGsp~~~~~~~~~~~~~~~~p~~~~ 82 (626)
T TIGR01390 3 LRIVETTDLHTNLMDYDYYKDKPTDKFGLTRTATLIKQARAEVKNSVLVDNGDLIQGSPLGDYMAAQGLKAGQMHPVYKA 82 (626)
T ss_pred EEEEEEcCCccCccCCcccCCCCCCCcCHHHHHHHHHHHHhhCCCeEEEECCCcCCCccchhhhhhccccCCCcChHHHH
Confidence 457788999999742 3444544322 2345677799998765433 235555
Q ss_pred HHHhhhhCCCcEEEECCCcch
Q psy13699 98 LLALKVRYPDRITLIRGNHES 118 (308)
Q Consensus 98 l~~lk~~~p~~v~~lrGNHE~ 118 (308)
+-.|. .-....||||.
T Consensus 83 mN~lg-----yDa~tlGNHEF 98 (626)
T TIGR01390 83 MNLLK-----YDVGNLGNHEF 98 (626)
T ss_pred HhhcC-----ccEEecccccc
Confidence 55555 24578899995
No 120
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=82.69 E-value=3.1 Score=38.06 Aligned_cols=65 Identities=22% Similarity=0.167 Sum_probs=44.9
Q ss_pred CcceeccCCCCHHH--HHHHHHhcC-CCCCCcEEeccCeecCC-CCcHHHHHHHHHhhhhCCCcEEEECCCcch
Q psy13699 49 PVTVCGDIHGQFYD--LKELFKVGG-DVPETNYLFMGDFVDRG-FYSVETFLLLLALKVRYPDRITLIRGNHES 118 (308)
Q Consensus 49 ~i~viGDIHG~~~~--L~~ll~~~~-~~~~~~~vfLGD~vDrG-~~s~evl~~l~~lk~~~p~~v~~lrGNHE~ 118 (308)
++.+||||=|.... +...|+... ..+.+-+|..||..--| .-+-++.+.|..+.. .+..+ ||||.
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~gg~gl~~~~~~~L~~~G~----D~iTl-GNH~f 69 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKEYKIDFVIANGENAAGGKGITPKIAKELLSAGV----DVITM-GNHTW 69 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHHCCCCEEEECCccccCCCCCCHHHHHHHHhcCC----CEEEe-ccccc
Confidence 57899999998655 445554432 22456677789988666 367788888888774 35555 99985
No 121
>KOG2476|consensus
Probab=82.55 E-value=2.7 Score=41.31 Aligned_cols=69 Identities=22% Similarity=0.338 Sum_probs=51.8
Q ss_pred cCCcceeccCCCCHHHHHHHHHhcC--CCCCCcEEeccCeecCCCCcHHHHHHHHHhhhhCCCcEEEECCCc
Q psy13699 47 DSPVTVCGDIHGQFYDLKELFKVGG--DVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNH 116 (308)
Q Consensus 47 ~~~i~viGDIHG~~~~L~~ll~~~~--~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNH 116 (308)
+.+|.|+||.-|+++.|.+-.+... ..+-+-++++|++.+-..++-|++.+...-+ ..|--++++-+|-
T Consensus 5 ~~kILv~Gd~~Gr~~eli~rI~~v~Kk~GpFd~liCvGnfF~~~~~~~e~~~ykng~~-~vPiptY~~g~~~ 75 (528)
T KOG2476|consen 5 DAKILVCGDVEGRFDELIKRIQKVNKKSGPFDLLICVGNFFGHDTQNAEVEKYKNGTK-KVPIPTYFLGDNA 75 (528)
T ss_pred CceEEEEcCccccHHHHHHHHHHHhhcCCCceEEEEecccCCCccchhHHHHHhcCCc-cCceeEEEecCCC
Confidence 4789999999999999877665433 2356889999999987777888887765543 4565567766664
No 122
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=80.66 E-value=2 Score=41.68 Aligned_cols=70 Identities=11% Similarity=0.085 Sum_probs=42.7
Q ss_pred cCCcceeccC-CCCHHHH--HHHHH-hcCCCCCCcEEeccCeecCCCCcHH------HHHHHHHhh---hhCCCcEEEEC
Q psy13699 47 DSPVTVCGDI-HGQFYDL--KELFK-VGGDVPETNYLFMGDFVDRGFYSVE------TFLLLLALK---VRYPDRITLIR 113 (308)
Q Consensus 47 ~~~i~viGDI-HG~~~~L--~~ll~-~~~~~~~~~~vfLGD~vDrG~~s~e------vl~~l~~lk---~~~p~~v~~lr 113 (308)
+.+.+++||- -|..... .+.+. .+...+.+-+|-+||-.+.|..++. ..+.++.-. .+- ..+++.
T Consensus 26 ~l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~~~~FVls~GDNF~~Gv~sv~Dp~f~~~FE~vY~~~s~~L~~--Pwy~vL 103 (394)
T PTZ00422 26 QLRFASLGNWGTGSKQQKLVASYLKQYAKNERVTFLVSPGSNFPGGVDGLNDPKWKHCFENVYSEESGDMQI--PFFTVL 103 (394)
T ss_pred eEEEEEEecCCCCchhHHHHHHHHHHHHHhCCCCEEEECCccccCCCCCccchhHHhhHhhhccCcchhhCC--CeEEeC
Confidence 3468999994 3433322 12232 2234567889999998888877533 344444222 122 389999
Q ss_pred CCcch
Q psy13699 114 GNHES 118 (308)
Q Consensus 114 GNHE~ 118 (308)
||||.
T Consensus 104 GNHDy 108 (394)
T PTZ00422 104 GQADW 108 (394)
T ss_pred Ccccc
Confidence 99997
No 123
>KOG2310|consensus
Probab=80.14 E-value=3.4 Score=41.46 Aligned_cols=54 Identities=20% Similarity=0.229 Sum_probs=41.9
Q ss_pred cCCcceeccCCC------------CHHHHHHHHHhcCCCCCCcEEeccCeecCCCCcHHHHHHHHH
Q psy13699 47 DSPVTVCGDIHG------------QFYDLKELFKVGGDVPETNYLFMGDFVDRGFYSVETFLLLLA 100 (308)
Q Consensus 47 ~~~i~viGDIHG------------~~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~ 100 (308)
..+|.|-.|+|= .+..|..+|..+.....|-++.-||+..-..-|.+++.-...
T Consensus 13 tirILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeNkPSr~~L~~~i~ 78 (646)
T KOG2310|consen 13 TIRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHENKPSRKTLHRCLE 78 (646)
T ss_pred ceEEEEeecCccccccCCcccccchHHHHHHHHHHHHhcCCcEEEecCcccccCCccHHHHHHHHH
Confidence 357888888884 456788899888777888888999999888888776655444
No 124
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=77.08 E-value=2.5 Score=44.91 Aligned_cols=67 Identities=21% Similarity=0.205 Sum_probs=42.3
Q ss_pred cCCcceeccCCCCHHH----------------HHHHHHhcC-CCCCCcEEeccCeecCCCCc--------------HHHH
Q psy13699 47 DSPVTVCGDIHGQFYD----------------LKELFKVGG-DVPETNYLFMGDFVDRGFYS--------------VETF 95 (308)
Q Consensus 47 ~~~i~viGDIHG~~~~----------------L~~ll~~~~-~~~~~~~vfLGD~vDrG~~s--------------~evl 95 (308)
+.+|+-..|+||++.. +..+++... ..+..-+|-.||.+..-+.+ .-++
T Consensus 115 ~LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQGSpl~~~~a~~~~~~~g~~~P~i 194 (814)
T PRK11907 115 DVRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQGTPLGTYKAIVDPVEEGEQHPMY 194 (814)
T ss_pred EEEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCCCcccchhhhccccccCcchHHH
Confidence 4568889999999642 233344332 22345677799998754432 1356
Q ss_pred HHHHHhhhhCCCcEEEECCCcch
Q psy13699 96 LLLLALKVRYPDRITLIRGNHES 118 (308)
Q Consensus 96 ~~l~~lk~~~p~~v~~lrGNHE~ 118 (308)
..+-.|.. -....||||.
T Consensus 195 ~amN~LGy-----DA~tLGNHEF 212 (814)
T PRK11907 195 AALEALGF-----DAGTLGNHEF 212 (814)
T ss_pred HHHhccCC-----CEEEechhhc
Confidence 66666652 4678899995
No 125
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=75.95 E-value=3.3 Score=42.05 Aligned_cols=68 Identities=22% Similarity=0.163 Sum_probs=39.8
Q ss_pred ecCCcceeccCCCCHHH----------HHHHHHhcC-----CCCCCcEEeccCeecCCCCc-----HHHHHHHHHhhhhC
Q psy13699 46 IDSPVTVCGDIHGQFYD----------LKELFKVGG-----DVPETNYLFMGDFVDRGFYS-----VETFLLLLALKVRY 105 (308)
Q Consensus 46 ~~~~i~viGDIHG~~~~----------L~~ll~~~~-----~~~~~~~vfLGD~vDrG~~s-----~evl~~l~~lk~~~ 105 (308)
.+..|+-+.|+||++.. +..+++... ..++.-++..||.+...+.+ .-+++++-.+..
T Consensus 33 ~~ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~s~~~~g~~~i~~mN~~g~-- 110 (551)
T PRK09558 33 YKITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLIGY-- 110 (551)
T ss_pred eEEEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEhhhhcCCchhHHHHhcCCC--
Confidence 34568899999998741 233343322 23445677789998643322 234555555542
Q ss_pred CCcEEEECCCcch
Q psy13699 106 PDRITLIRGNHES 118 (308)
Q Consensus 106 p~~v~~lrGNHE~ 118 (308)
. +...||||.
T Consensus 111 --D-a~tlGNHEF 120 (551)
T PRK09558 111 --D-AMAVGNHEF 120 (551)
T ss_pred --C-EEccccccc
Confidence 3 344599995
No 126
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=75.65 E-value=4.4 Score=41.20 Aligned_cols=51 Identities=22% Similarity=0.115 Sum_probs=30.7
Q ss_pred HHHHHHhcC-CCCCCcEEeccCeecCCCCc-----HHHHHHHHHhhhhCCCcEEEECCCcch
Q psy13699 63 LKELFKVGG-DVPETNYLFMGDFVDRGFYS-----VETFLLLLALKVRYPDRITLIRGNHES 118 (308)
Q Consensus 63 L~~ll~~~~-~~~~~~~vfLGD~vDrG~~s-----~evl~~l~~lk~~~p~~v~~lrGNHE~ 118 (308)
+..+++... ..+..-++..||.+...+.+ ..+++++-++. --.+..||||.
T Consensus 37 l~~~i~~~r~~~~n~l~ldaGD~~~gs~~~~~~~g~~~i~~~N~~g-----~Da~~lGNHEF 93 (550)
T TIGR01530 37 LNAEINKLRAESKNALVLHAGDAIIGTLYFTLFGGRADAALMNAAG-----FDFFTLGNHEF 93 (550)
T ss_pred HHHHHHHHHhhCCCeEEEECCCCCCCccchhhcCCHHHHHHHhccC-----CCEEEeccccc
Confidence 344444332 23455677899998765432 33555555555 24688999995
No 127
>KOG2679|consensus
Probab=70.33 E-value=2.7 Score=38.83 Aligned_cols=68 Identities=26% Similarity=0.313 Sum_probs=44.1
Q ss_pred CCcceecc--CCCCHHHHHHHHHh--cC-CCCCCcEEeccCe-ecCCCCc---------HHHHHHHHHhhhhCCCcEEEE
Q psy13699 48 SPVTVCGD--IHGQFYDLKELFKV--GG-DVPETNYLFMGDF-VDRGFYS---------VETFLLLLALKVRYPDRITLI 112 (308)
Q Consensus 48 ~~i~viGD--IHG~~~~L~~ll~~--~~-~~~~~~~vfLGD~-vDrG~~s---------~evl~~l~~lk~~~p~~v~~l 112 (308)
.++.|||| .+|.+..-+..+.. ++ .-+-+-++-+||- -|-|..+ .+-+.---.|+ . ..+.+
T Consensus 44 lsflvvGDwGr~g~~nqs~va~qmg~ige~l~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF~nIYT~pSLQ--k--pWy~v 119 (336)
T KOG2679|consen 44 LSFLVVGDWGRRGSFNQSQVALQMGEIGEKLDIDFVLSTGDNFYDTGLTSENDPRFQDSFENIYTAPSLQ--K--PWYSV 119 (336)
T ss_pred eEEEEEcccccCCchhHHHHHHHHHhHHHhccceEEEecCCcccccCCCCCCChhHHhhhhhcccCcccc--c--chhhh
Confidence 46899999 78988887666543 22 3456778889984 4667644 23222222233 2 37899
Q ss_pred CCCcchh
Q psy13699 113 RGNHESR 119 (308)
Q Consensus 113 rGNHE~~ 119 (308)
.||||..
T Consensus 120 lGNHDyr 126 (336)
T KOG2679|consen 120 LGNHDYR 126 (336)
T ss_pred ccCcccc
Confidence 9999974
No 128
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=66.84 E-value=13 Score=34.69 Aligned_cols=72 Identities=18% Similarity=0.295 Sum_probs=45.9
Q ss_pred CCcceeccCCC----CHHHHHHHHHhcC-CCC----CCcEEeccCeecCC----CCc----HHHHHHHHHh-hhhCC---
Q psy13699 48 SPVTVCGDIHG----QFYDLKELFKVGG-DVP----ETNYLFMGDFVDRG----FYS----VETFLLLLAL-KVRYP--- 106 (308)
Q Consensus 48 ~~i~viGDIHG----~~~~L~~ll~~~~-~~~----~~~~vfLGD~vDrG----~~s----~evl~~l~~l-k~~~p--- 106 (308)
..++|+||+|= .++.|.++|+... ..+ ..-+|+.|+++-+. ..+ .+-.+-|..+ ...||
T Consensus 28 ~~~VilSDV~LD~p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~La~llls~fp~L~ 107 (291)
T PTZ00235 28 HNWIIMHDVYLDSPYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFDYNRNFHKVYIKGFEKLSVMLISKFKLIL 107 (291)
T ss_pred eEEEEEEeeccCCHHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCcccCCCCchHHHHHHHHHHHHHHHHhChHHH
Confidence 56899999994 5666777776542 212 45699999998663 222 2333344332 23444
Q ss_pred --CcEEEECCCcchh
Q psy13699 107 --DRITLIRGNHESR 119 (308)
Q Consensus 107 --~~v~~lrGNHE~~ 119 (308)
.++++|+|-.|-.
T Consensus 108 ~~s~fVFVPGpnDPw 122 (291)
T PTZ00235 108 EHCYLIFIPGINDPC 122 (291)
T ss_pred hcCeEEEECCCCCCC
Confidence 4899999999963
No 129
>KOG3947|consensus
Probab=65.90 E-value=6.9 Score=36.14 Aligned_cols=63 Identities=22% Similarity=0.279 Sum_probs=41.5
Q ss_pred CCcceeccCCCCHHHHHHHHHhcCCCCCCcEEeccCeecCCCCcHHHHHHH---HHhhhhCCCcEEEECCCcchhh
Q psy13699 48 SPVTVCGDIHGQFYDLKELFKVGGDVPETNYLFMGDFVDRGFYSVETFLLL---LALKVRYPDRITLIRGNHESRQ 120 (308)
Q Consensus 48 ~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l---~~lk~~~p~~v~~lrGNHE~~~ 120 (308)
.+.+.|+|.|+...+.. ..++.|.++-+||+-.-|. +-||..+= -+|.-+ +=+.|+||||.-.
T Consensus 62 ~r~VcisdtH~~~~~i~------~~p~gDvlihagdfT~~g~-~~ev~~fn~~~gslph~---yKIVIaGNHELtF 127 (305)
T KOG3947|consen 62 ARFVCISDTHELTFDIN------DIPDGDVLIHAGDFTNLGL-PEEVIKFNEWLGSLPHE---YKIVIAGNHELTF 127 (305)
T ss_pred eEEEEecCcccccCccc------cCCCCceEEeccCCccccC-HHHHHhhhHHhccCcce---eeEEEeeccceee
Confidence 46899999999754432 3566778899999875443 45555443 333322 3478999999754
No 130
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=63.13 E-value=7.5 Score=41.26 Aligned_cols=68 Identities=18% Similarity=0.203 Sum_probs=42.0
Q ss_pred ecCCcceeccCCCCHHH----------------HHHHHHhcC-CCCCCcEEeccCeecCCCCc-----------------
Q psy13699 46 IDSPVTVCGDIHGQFYD----------------LKELFKVGG-DVPETNYLFMGDFVDRGFYS----------------- 91 (308)
Q Consensus 46 ~~~~i~viGDIHG~~~~----------------L~~ll~~~~-~~~~~~~vfLGD~vDrG~~s----------------- 91 (308)
+..+|+-..|+||++.. +..+++... ..+..-+|-.||.+...+.+
T Consensus 38 ~~L~IL~TnDiHg~l~~~dy~~~~~~~~~Glar~AtlI~~~R~e~~ntlllD~GD~iqGspl~~~~~~~~~~~~~~~~~~ 117 (780)
T PRK09418 38 VNLRILETSDIHVNLMNYDYYQTKTDNKVGLVQTATLVNKAREEAKNSVLFDDGDALQGTPLGDYVANKINDPKKPVDPS 117 (780)
T ss_pred eEEEEEEEeecCCCCcCcCccccCCcCCCCHHHHHHHHHHHHHhCCCeEEEECCCCCCCchHHHHHhhcccccccccccc
Confidence 45679999999999632 333444332 22445677799988443321
Q ss_pred --HHHHHHHHHhhhhCCCcEEEECCCcch
Q psy13699 92 --VETFLLLLALKVRYPDRITLIRGNHES 118 (308)
Q Consensus 92 --~evl~~l~~lk~~~p~~v~~lrGNHE~ 118 (308)
.-++.++-.|.. =....||||.
T Consensus 118 ~~~p~i~~mN~lgy-----Da~tlGNHEF 141 (780)
T PRK09418 118 YTHPLYRLMNLMKY-----DVISLGNHEF 141 (780)
T ss_pred cchHHHHHHhccCC-----CEEecccccc
Confidence 235666666652 3678899995
No 131
>PF02609 Exonuc_VII_S: Exonuclease VII small subunit; InterPro: IPR003761 Exonuclease VII is composed of two non-identical subunits; one large subunit and 4 small ones []. This enzyme catalyses exonucleolytic cleavage in either 5'-3' or 3'-5' direction to yield nucleoside 5'-phosphates.; GO: 0008855 exodeoxyribonuclease VII activity, 0006308 DNA catabolic process, 0009318 exodeoxyribonuclease VII complex; PDB: 1VP7_F.
Probab=60.73 E-value=28 Score=23.57 Aligned_cols=36 Identities=19% Similarity=0.347 Sum_probs=28.9
Q ss_pred hhHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHhh
Q psy13699 3 EYIQDLDRQIEQLKRCDPIKESEVKALCAKAREILVE 39 (308)
Q Consensus 3 ~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~il~~ 39 (308)
+.|+.++.+++++.++. ++-++...+.+++..+++.
T Consensus 3 e~~~~Le~Iv~~Le~~~-~sLdes~~lyeeg~~l~~~ 38 (53)
T PF02609_consen 3 EAMERLEEIVEKLESGE-LSLDESLKLYEEGMELIKK 38 (53)
T ss_dssp HHHHHHHHHHHHHHTT--S-HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCC-CCHHHHHHHHHHHHHHHHH
Confidence 45788999999998875 8899999999999888764
No 132
>PF13258 DUF4049: Domain of unknown function (DUF4049)
Probab=57.05 E-value=11 Score=34.07 Aligned_cols=88 Identities=22% Similarity=0.321 Sum_probs=45.8
Q ss_pred CcEEeccCee-cCCCC---cHHHHHHHHHhhhh-------CCCcEEEECCCcchhhhHhhhCChHHHH--HHhCCchhhh
Q psy13699 76 TNYLFMGDFV-DRGFY---SVETFLLLLALKVR-------YPDRITLIRGNHESRQITQVYGFYDECL--RKYGSITVWR 142 (308)
Q Consensus 76 ~~~vfLGD~v-DrG~~---s~evl~~l~~lk~~-------~p~~v~~lrGNHE~~~~~~~~gf~~e~~--~~~~~~~~~~ 142 (308)
+..+||||-. ||-.. ..=++.+|.++.-. -.++|+.|-||||.-. + |.+.... .+.....
T Consensus 86 tpciflgdhtgdrfsti~gd~yiltllnsm~nme~nkdsrinknvvvlagnhein~-n---gny~arlanhkls~gD--- 158 (318)
T PF13258_consen 86 TPCIFLGDHTGDRFSTIFGDQYILTLLNSMRNMEGNKDSRINKNVVVLAGNHEINF-N---GNYMARLANHKLSAGD--- 158 (318)
T ss_pred ccceeecCcccchhhhhcchHHHHHHHHHHHhcccccccccccceEEEecCceecc-C---chHHHHHhhCCCCccc---
Confidence 4567777753 33111 12255555555431 2358999999999642 1 2221111 1111222
Q ss_pred hhhHHhhccccceeE-eCeEEEEcCCCCCC
Q psy13699 143 YCTEIFDYLSLSAII-DGRIFCVHGGLSPS 171 (308)
Q Consensus 143 ~~~~~~~~LPl~~~i-~~~~l~vHgGi~p~ 171 (308)
--+.++.+|.+..- ..+++-.|.||-.+
T Consensus 159 -TYnlIKtldVC~YD~erkvltsHHGIird 187 (318)
T PF13258_consen 159 -TYNLIKTLDVCNYDPERKVLTSHHGIIRD 187 (318)
T ss_pred -hhhccccccccccCcchhhhhcccCceec
Confidence 23445677775444 34688888888643
No 133
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=52.41 E-value=12 Score=38.46 Aligned_cols=67 Identities=13% Similarity=0.166 Sum_probs=43.5
Q ss_pred eChhHHHhhhhhcCce----EEEeeccccc--CCcee-ecCCeeEEE---EeCCCCCccCCCcEEEEEEcCCCeeEEEE
Q psy13699 218 FGSDVVASFNAANNID----MICRAHQLVM--EGYKW-HFNETVLTV---WSAPNYCYRCGNVAAILELNENLQREFTI 286 (308)
Q Consensus 218 fg~~~~~~fl~~~~l~----~iirgH~~~~--~G~~~-~~~~~~iTi---fSa~~y~~~~~n~~avl~i~~~~~~~~~~ 286 (308)
-.++...+.|+..|++ .||-||.||. .|=.+ -++||++.| ||.. |... .+-|+.-.|...--..+++
T Consensus 506 ~~e~~c~~IL~EFgl~~~~~hIINGHvPVk~k~GEsPIKa~Gkl~VIDGGfskA-Yqk~-TGIAGYTLiyNS~gl~L~~ 582 (640)
T PF06874_consen 506 EDEEICDKILEEFGLDPERGHIINGHVPVKVKKGESPIKANGKLIVIDGGFSKA-YQKT-TGIAGYTLIYNSYGLQLVA 582 (640)
T ss_pred cCHHHHHHHHHHhCCCCCCCeEECCccccccCCCCCCccCCCEEEEEcChhhhh-hccc-cCccceEEEecCCcceecc
Confidence 4566777788889998 9999999986 56543 458999999 8765 3332 3344444443333333333
No 134
>KOG3339|consensus
Probab=51.03 E-value=1.4e+02 Score=26.18 Aligned_cols=86 Identities=21% Similarity=0.286 Sum_probs=55.4
Q ss_pred CcEEeccCeecCCCCcHHHHHHHHHhhhhCCCcEEEECCCcchhhhHhhhCChH---HHHHHh---------CC---chh
Q psy13699 76 TNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYD---ECLRKY---------GS---ITV 140 (308)
Q Consensus 76 ~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~---e~~~~~---------~~---~~~ 140 (308)
..+||||- |-+.-|++.++..++..|-.+ ..+.|+-|.|..++...|.. ++..++ |+ ..+
T Consensus 40 ~~lVvlGS----GGHT~EMlrLl~~l~~~y~~r-~yI~a~tD~mS~~k~~~F~~~~a~~~a~~~~ipRsReVgQS~ltSv 114 (211)
T KOG3339|consen 40 STLVVLGS----GGHTGEMLRLLEALQDLYSPR-SYIAADTDEMSEQKARSFELSLAHCKAKNYEIPRSREVGQSWLTSV 114 (211)
T ss_pred eEEEEEcC----CCcHHHHHHHHHHHHhhcCce-EEEEecCchhhHHHHHhhhccccccchhheecchhhhhhhhhhhhH
Confidence 45889984 889999999999999888655 45589999998876554431 111111 11 234
Q ss_pred hhhhhHHhhccccceeEeCeEEEEcC
Q psy13699 141 WRYCTEIFDYLSLSAIIDGRIFCVHG 166 (308)
Q Consensus 141 ~~~~~~~~~~LPl~~~i~~~~l~vHg 166 (308)
+..+...+..+++..-+--.++.+.|
T Consensus 115 ~Tti~all~s~~lv~RirPdlil~NG 140 (211)
T KOG3339|consen 115 FTTIWALLQSFVLVWRIRPDLILCNG 140 (211)
T ss_pred HHHHHHHHHHheEEEecCCCEEEECC
Confidence 55556666666664444445555655
No 135
>PRK14066 exodeoxyribonuclease VII small subunit; Provisional
Probab=50.78 E-value=47 Score=24.47 Aligned_cols=39 Identities=8% Similarity=0.090 Sum_probs=31.7
Q ss_pred hhHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHhhCCC
Q psy13699 3 EYIQDLDRQIEQLKRCDPIKESEVKALCAKAREILVEESN 42 (308)
Q Consensus 3 ~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~il~~ep~ 42 (308)
+.|+.++.+++++-++. ++.++.+.+.+++.++.+.-..
T Consensus 8 eal~~LE~IV~~LE~g~-l~Leesl~lyeeG~~L~k~C~~ 46 (75)
T PRK14066 8 TALKKLEEVVKKLEGGE-LSLDDSLKAFEEGVKHAAFCSK 46 (75)
T ss_pred HHHHHHHHHHHHHHCCC-CCHHHHHHHHHHHHHHHHHHHH
Confidence 35678999999988777 8999999999999988875443
No 136
>KOG1378|consensus
Probab=46.03 E-value=24 Score=34.89 Aligned_cols=34 Identities=15% Similarity=0.204 Sum_probs=26.0
Q ss_pred hHHHhhhhhcCceEEEeecccccCCceeecCCee
Q psy13699 221 DVVASFNAANNIDMICRAHQLVMEGYKWHFNETV 254 (308)
Q Consensus 221 ~~~~~fl~~~~l~~iirgH~~~~~G~~~~~~~~~ 254 (308)
..++..+-+++++.++-||...-+.....++.++
T Consensus 322 ~~LE~l~~~~~VDvvf~GHvH~YER~~piyn~~~ 355 (452)
T KOG1378|consen 322 EGLEPLFVKYKVDVVFWGHVHRYERFCPIYNNTC 355 (452)
T ss_pred HHHHHHHHHhceeEEEeccceehhccchhhccee
Confidence 3688899999999999999876565555555444
No 137
>PRK14069 exodeoxyribonuclease VII small subunit; Provisional
Probab=44.12 E-value=64 Score=24.93 Aligned_cols=41 Identities=20% Similarity=0.243 Sum_probs=32.8
Q ss_pred hhHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHhhCCCce
Q psy13699 3 EYIQDLDRQIEQLKRCDPIKESEVKALCAKAREILVEESNVQ 44 (308)
Q Consensus 3 ~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~il~~ep~l~ 44 (308)
+.|+.|+.+++++-++. ++.++.+.+.+++.++++.-...+
T Consensus 12 eal~~LEeIV~~LEsgd-l~LEesl~lyeeGv~L~k~C~~~L 52 (95)
T PRK14069 12 DALRELEQIAEKLERQD-FSLEESLKAYERGMELKKICSGIL 52 (95)
T ss_pred HHHHHHHHHHHHHHCCC-CCHHHHHHHHHHHHHHHHHHHHHH
Confidence 45778999999988776 899999999999999887554433
No 138
>PRK00977 exodeoxyribonuclease VII small subunit; Provisional
Probab=43.23 E-value=70 Score=23.79 Aligned_cols=40 Identities=15% Similarity=0.197 Sum_probs=31.7
Q ss_pred hhHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHhhCCCc
Q psy13699 3 EYIQDLDRQIEQLKRCDPIKESEVKALCAKAREILVEESNV 43 (308)
Q Consensus 3 ~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~il~~ep~l 43 (308)
+.|+.|+.+++.+-++. ++.++...+.+++.++++.-...
T Consensus 14 ea~~~LEeIv~~LE~~~-l~Lees~~lyeeg~~L~k~C~~~ 53 (80)
T PRK00977 14 EALAELEEIVTRLESGD-LPLEESLAAFERGVALARQCQKK 53 (80)
T ss_pred HHHHHHHHHHHHHHCCC-CCHHHHHHHHHHHHHHHHHHHHH
Confidence 34678888888887766 89999999999999888754443
No 139
>PRK14068 exodeoxyribonuclease VII small subunit; Provisional
Probab=42.82 E-value=74 Score=23.48 Aligned_cols=38 Identities=16% Similarity=0.272 Sum_probs=30.5
Q ss_pred hhHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHhhCC
Q psy13699 3 EYIQDLDRQIEQLKRCDPIKESEVKALCAKAREILVEES 41 (308)
Q Consensus 3 ~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~il~~ep 41 (308)
+.|+.++.+++.+-++. ++.++...+.+++.++++.-.
T Consensus 10 eal~~Le~IV~~LE~gd-l~Leesl~lyeeG~~L~k~C~ 47 (76)
T PRK14068 10 EMMQELEQIVQKLDNET-VSLEESLDLYQRGMKLSAACD 47 (76)
T ss_pred HHHHHHHHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHH
Confidence 34678899898888776 899999999999988876544
No 140
>TIGR01280 xseB exodeoxyribonuclease VII, small subunit. This protein is the small subunit for exodeoxyribonuclease VII. Exodeoxyribonuclease VII is made of a complex of four small subunits to one large subunit. The complex degrades single-stranded DNA into large acid-insoluble oligonucleotides. These nucleotides are then degraded further into acid-soluble oligonucleotides.
Probab=42.80 E-value=77 Score=22.70 Aligned_cols=38 Identities=16% Similarity=0.268 Sum_probs=30.5
Q ss_pred hhHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHhhCC
Q psy13699 3 EYIQDLDRQIEQLKRCDPIKESEVKALCAKAREILVEES 41 (308)
Q Consensus 3 ~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~il~~ep 41 (308)
+.|+.++.+++++-++. ++-++...+.+++.++++.-.
T Consensus 5 e~l~~Le~Iv~~LE~~~-l~Leesl~lyeeG~~L~k~c~ 42 (67)
T TIGR01280 5 EALSELEQIVQKLESGD-LALEEALNLFERGMALARRCE 42 (67)
T ss_pred HHHHHHHHHHHHHHCCC-CCHHHHHHHHHHHHHHHHHHH
Confidence 35678899999888776 899999999999888876544
No 141
>PF02875 Mur_ligase_C: Mur ligase family, glutamate ligase domain This Prosite entry is a subset of the Pfam family.; InterPro: IPR004101 The bacterial cell wall provides strength and rigidity to counteract internal osmotic pressure, and protection against the environment. The peptidoglycan layer gives the cell wall its strength, and helps maintain the overall shape of the cell. The basic peptidoglycan structure of both Gram-positive and Gram-negative bacteria is comprised of a sheet of glycan chains connected by short cross-linking polypeptides. Biosynthesis of peptidoglycan is a multi-step (11-12 steps) process comprising three main stages: (1) formation of UDP-N-acetylmuramic acid (UDPMurNAc) from N-acetylglucosamine (GlcNAc). (2) addition of a short polypeptide chain to the UDPMurNAc. (3) addition of a second GlcNAc to the disaccharide-pentapeptide building block and transport of this unit through the cytoplasmic membrane and incorporation into the growing peptidoglycan layer. Stage two involves four key Mur ligase enzymes: MurC (6.3.2.8 from EC) [], MurD (6.3.2.9 from EC) [], MurE (6.3.2.13 from EC) [] and MurF (6.3.2.10 from EC) []. These four Mur ligases are responsible for the successive additions of L-alanine, D-glutamate, meso-diaminopimelate or L-lysine, and D-alanyl-D-alanine to UDP-N-acetylmuramic acid. All four Mur ligases are topologically similar to one another, even though they display low sequence identity. They are each composed of three domains: an N-terminal Rossmann-fold domain responsible for binding the UDPMurNAc substrate; a central domain (similar to ATP-binding domains of several ATPases and GTPases); and a C-terminal domain (similar to dihydrofolate reductase fold) that appears to be associated with binding the incoming amino acid. The conserved sequence motifs found in the four Mur enzymes also map to other members of the Mur ligase family, including folylpolyglutamate synthetase, cyanophycin synthetase and the capB enzyme from Bacillales []. This entry represents the C-terminal domain from all four stage 2 Mur enzymes: UDP-N-acetylmuramate-L-alanine ligase (MurC), UDP-N-acetylmuramoylalanine-D-glutamate ligase (MurD), UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (MurE), and UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase (MurF). This entry also includes the C-terminal domain of folylpolyglutamate synthase that transfers glutamate to folylpolyglutamate and cyanophycin synthetase that catalyses the biosynthesis of the cyanobacterial reserve material multi-L-arginyl-poly-L-aspartate (cyanophycin) []. The C-terminal domain is almost always associated with the cytoplasmic peptidoglycan synthetases, N-terminal domain (see IPR000713 from INTERPRO).; GO: 0005524 ATP binding, 0016874 ligase activity, 0009058 biosynthetic process; PDB: 2Y68_A 3UAG_A 4UAG_A 2UAG_A 1E0D_A 2XPC_A 2WJP_A 2VTE_A 2Y67_A 1EEH_A ....
Probab=42.69 E-value=51 Score=24.42 Aligned_cols=69 Identities=16% Similarity=0.068 Sum_probs=44.6
Q ss_pred CCcceeccCCCCHHHHHHHHHhcC--CCCCCcEEeccCeecCCCCcHHHHHHHHHhhhhCCCcEEEECCCc
Q psy13699 48 SPVTVCGDIHGQFYDLKELFKVGG--DVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNH 116 (308)
Q Consensus 48 ~~i~viGDIHG~~~~L~~ll~~~~--~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNH 116 (308)
..+.||=|---|.+.+.++++... .+....++.+|+.-|.|..+.+....+..+...+...+++...|+
T Consensus 12 ~~~~vi~D~ahNp~s~~a~l~~l~~~~~~~~~i~V~G~~~d~g~~~~~~~~~~~~~~~~~~d~vi~~~~~~ 82 (91)
T PF02875_consen 12 NGPTVIDDYAHNPDSIRALLEALKELYPKGRIIAVFGAMGDLGSKDKDFHEEIGELAAQLADVVILTGDNP 82 (91)
T ss_dssp TTEEEEEET--SHHHHHHHHHHHHHHCTTSEEEEEEEEBTT-HTSHHHCHHHHHHHHTTCSSEEEEETSBT
T ss_pred CCcEEEEECCCCHHHHHHHHHHHHHhccCCcEEEEEccccccccccHHHHHHHHHHHHhcCCEEEEcCCCC
Confidence 456777786677888888886553 235667888999999888777766666666555555655544443
No 142
>KOG2463|consensus
Probab=42.18 E-value=73 Score=30.25 Aligned_cols=80 Identities=15% Similarity=0.265 Sum_probs=56.2
Q ss_pred CeeEeChhHHHhhhhhcCceEEEeecccccCCceeecC-------CeeEEEEeCC--CCCccCCCc---EEEEEEcCCCe
Q psy13699 214 AGYLFGSDVVASFNAANNIDMICRAHQLVMEGYKWHFN-------ETVLTVWSAP--NYCYRCGNV---AAILELNENLQ 281 (308)
Q Consensus 214 ~g~~fg~~~~~~fl~~~~l~~iirgH~~~~~G~~~~~~-------~~~iTifSa~--~y~~~~~n~---~avl~i~~~~~ 281 (308)
.+++-|..+++..|-.+|+.++- .+|++..-= ..|+||||-- .||..|+|+ -+.+.|++++.
T Consensus 207 Vac~TtDfamQNVlLqm~L~l~~------~~G~~Ir~~r~~iLRCh~Cfsit~~m~k~FCp~CG~~TL~K~aVsv~~dG~ 280 (376)
T KOG2463|consen 207 VACLTTDFAMQNVLLQMNLNLLA------MSGMKIRSVRSYILRCHGCFSITSEMPKDFCPSCGHKTLTKCAVSVDEDGN 280 (376)
T ss_pred eeeecccHHHHHHHHHhcccccC------ccchhhhhhhhheeEeeeeeEecCccchhcccccCCCeeeEEEEEecCCCc
Confidence 45678999999999999998875 345543211 1377887743 788888875 24566788888
Q ss_pred eEEEEEecCCCCCCCCCC
Q psy13699 282 REFTIFEAAPQESRGIPS 299 (308)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~ 299 (308)
.........++..|+.++
T Consensus 281 ~~~h~k~r~~~n~RG~~Y 298 (376)
T KOG2463|consen 281 GQTHFKKRFQWNNRGLQY 298 (376)
T ss_pred eeEEeecccccccCccee
Confidence 887777676767777544
No 143
>PRK14070 exodeoxyribonuclease VII small subunit; Provisional
Probab=40.89 E-value=71 Score=23.14 Aligned_cols=39 Identities=15% Similarity=0.290 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHhhCCCce
Q psy13699 5 IQDLDRQIEQLKRCDPIKESEVKALCAKAREILVEESNVQ 44 (308)
Q Consensus 5 ~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~il~~ep~l~ 44 (308)
|+.++.+++.+-++. ++-++...+.+++.++++.-...+
T Consensus 1 m~~LEeIV~~LE~ge-l~Leesl~lyeeG~~L~k~C~~~L 39 (69)
T PRK14070 1 MKELEEIVNRLENED-LPLEESIKLFERGVELYRKCKEIL 39 (69)
T ss_pred CHHHHHHHHHHHCCC-CCHHHHHHHHHHHHHHHHHHHHHH
Confidence 567888888888776 899999999999988887544433
No 144
>PRK14064 exodeoxyribonuclease VII small subunit; Provisional
Probab=40.88 E-value=82 Score=23.15 Aligned_cols=38 Identities=18% Similarity=0.179 Sum_probs=30.1
Q ss_pred hhHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHhhCC
Q psy13699 3 EYIQDLDRQIEQLKRCDPIKESEVKALCAKAREILVEES 41 (308)
Q Consensus 3 ~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~il~~ep 41 (308)
+.|+.++.+++.+-++. ++.++.+.+.+++.++.+.-.
T Consensus 10 e~l~~LE~IV~~LE~~~-l~Leesl~~ye~G~~L~k~c~ 47 (75)
T PRK14064 10 EAIAELETIVEALENGS-ASLEDSLDMYQKGIELTKLCQ 47 (75)
T ss_pred HHHHHHHHHHHHHHCCC-CCHHHHHHHHHHHHHHHHHHH
Confidence 34678888888888776 898999999988888876543
No 145
>PRK14063 exodeoxyribonuclease VII small subunit; Provisional
Probab=38.71 E-value=92 Score=22.94 Aligned_cols=40 Identities=18% Similarity=0.204 Sum_probs=31.4
Q ss_pred hhHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHhhCCCc
Q psy13699 3 EYIQDLDRQIEQLKRCDPIKESEVKALCAKAREILVEESNV 43 (308)
Q Consensus 3 ~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~il~~ep~l 43 (308)
+.|+.++.++.++-++. ++-++...+.+++..+++.-...
T Consensus 9 eal~~LE~Iv~~LE~~~-l~Leesl~lyeeG~~L~k~C~~~ 48 (76)
T PRK14063 9 EAISQLEHLVSKLEQGD-VPLEEAISYFKEGMELSKLCDEK 48 (76)
T ss_pred HHHHHHHHHHHHHHCCC-CCHHHHHHHHHHHHHHHHHHHHH
Confidence 35678899998888766 89999999999888888754443
No 146
>PF12641 Flavodoxin_3: Flavodoxin domain
Probab=35.04 E-value=1.8e+02 Score=24.45 Aligned_cols=58 Identities=21% Similarity=0.344 Sum_probs=40.1
Q ss_pred ceeccCCCCHHHHHHHHH-hcCC------------CCCCcEEeccCeecCCCCcHHHHHHHHHhhhhCCCcEEE
Q psy13699 51 TVCGDIHGQFYDLKELFK-VGGD------------VPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITL 111 (308)
Q Consensus 51 ~viGDIHG~~~~L~~ll~-~~~~------------~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~ 111 (308)
++.+=.+||-..+.+.+. .++. .....+||+|=-+|+|.-+-++..+|..|+ +.+|++
T Consensus 2 IvYsS~TGNTkkvA~aI~~~l~~~~~~~~~~~~~~~~~yD~i~lG~w~d~G~~d~~~~~fl~~l~---~KkV~l 72 (160)
T PF12641_consen 2 IVYSSRTGNTKKVAEAIAEALGAKDIVSVEEPPEDLEDYDLIFLGFWIDKGTPDKDMKEFLKKLK---GKKVAL 72 (160)
T ss_pred EEEECCCChHHHHHHHHHHHCCCceeEeccccccCCCCCCEEEEEcCccCCCCCHHHHHHHHHcc---CCeEEE
Confidence 444556777776665552 2222 234569999999999999999999999976 345544
No 147
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=35.04 E-value=30 Score=31.57 Aligned_cols=39 Identities=28% Similarity=0.307 Sum_probs=26.8
Q ss_pred cEEeccCeecCCCCcHHHHHHHHHhhhhCCCcEEEECCCcch
Q psy13699 77 NYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHES 118 (308)
Q Consensus 77 ~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~ 118 (308)
+++|+||+|.+.-.. -+...|.+++.+++..+++. |=|.
T Consensus 1 ~ilfigdi~g~~G~~-~~~~~l~~lk~~~~~D~vi~--NgEn 39 (255)
T cd07382 1 KILFIGDIVGKPGRK-AVKEHLPKLKKEYKIDFVIA--NGEN 39 (255)
T ss_pred CEEEEEeCCCHHHHH-HHHHHHHHHHHHCCCCEEEE--CCcc
Confidence 589999999654322 36677888888887555544 5554
No 148
>PRK14067 exodeoxyribonuclease VII small subunit; Provisional
Probab=33.67 E-value=1.2e+02 Score=22.55 Aligned_cols=39 Identities=15% Similarity=0.147 Sum_probs=30.2
Q ss_pred hHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHhhCCCc
Q psy13699 4 YIQDLDRQIEQLKRCDPIKESEVKALCAKAREILVEESNV 43 (308)
Q Consensus 4 ~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~il~~ep~l 43 (308)
.|+.|+.+++++-++. ++.++...+.+++..+++.-...
T Consensus 12 al~~LEeIV~~LE~~~-l~Lees~~lyeeG~~L~k~C~~~ 50 (80)
T PRK14067 12 QLARLQEIVDALEGGD-LPLEESVALYKEGLGLARACREQ 50 (80)
T ss_pred HHHHHHHHHHHHHCCC-CCHHHHHHHHHHHHHHHHHHHHH
Confidence 4667888888887766 88899999988888887654433
No 149
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=33.32 E-value=44 Score=30.77 Aligned_cols=39 Identities=26% Similarity=0.384 Sum_probs=26.5
Q ss_pred cEEeccCeecCCCCcHH-HHHHHHHhhhhCCCcEEEECCCcchh
Q psy13699 77 NYLFMGDFVDRGFYSVE-TFLLLLALKVRYPDRITLIRGNHESR 119 (308)
Q Consensus 77 ~~vfLGD~vDrG~~s~e-vl~~l~~lk~~~p~~v~~lrGNHE~~ 119 (308)
+++|+||+|. ....+ +-..|-+++.+++..+++ .|=|..
T Consensus 2 ~ilfiGDi~G--~~Gr~~l~~~L~~lk~~~~~D~vI--aNgEn~ 41 (266)
T TIGR00282 2 KFLFIGDVYG--KAGRKIVKNNLPQLKSKYQADLVI--ANGENT 41 (266)
T ss_pred eEEEEEecCC--HHHHHHHHHHHHHHHHhCCCCEEE--EcCccc
Confidence 5899999994 43344 446788888888755444 466654
No 150
>PF14164 YqzH: YqzH-like protein
Probab=29.13 E-value=1.4e+02 Score=21.41 Aligned_cols=35 Identities=29% Similarity=0.548 Sum_probs=28.6
Q ss_pred HHHHHHHHhh-------CCCCCHHHHHHHHHHHHHHHhhCCC
Q psy13699 8 LDRQIEQLKR-------CDPIKESEVKALCAKAREILVEESN 42 (308)
Q Consensus 8 ~~~~i~~~~~-------~~~~~~~~~~~l~~~~~~il~~ep~ 42 (308)
|++||.+.++ +-+++..|...|++...+.-.++|.
T Consensus 6 I~Kmi~~~l~QYg~d~~~~pls~~E~~~L~~~i~~~~~~~~~ 47 (64)
T PF14164_consen 6 IEKMIINCLRQYGYDVECMPLSDEEWEELCKHIQERKNEEPD 47 (64)
T ss_pred HHHHHHHHHHHhCCcccCCCCCHHHHHHHHHHHHHHHhcCCC
Confidence 6667766653 3479999999999999999999886
No 151
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=26.59 E-value=33 Score=34.09 Aligned_cols=42 Identities=19% Similarity=0.299 Sum_probs=30.3
Q ss_pred ChhHHHhhhhhcCce----EEEeecccccC--Cce-eecCCeeEEE---EeC
Q psy13699 219 GSDVVASFNAANNID----MICRAHQLVME--GYK-WHFNETVLTV---WSA 260 (308)
Q Consensus 219 g~~~~~~fl~~~~l~----~iirgH~~~~~--G~~-~~~~~~~iTi---fSa 260 (308)
.++...+.|+..|++ .||-||+|+.+ |-. .-.+|+++.| ||-
T Consensus 514 de~ic~kil~eFGLdpe~ghiINGHtPVke~~GE~PIKAngKliVIDGGFsk 565 (648)
T COG3855 514 DEEICRKILEEFGLDPEGGHIINGHTPVKEKNGENPIKANGKLIVIDGGFSK 565 (648)
T ss_pred hHHHHHHHHHHhCCCcccCceecCCCcccccCCCCCccCCCeEEEEcCchhh
Confidence 345566778888887 89999999864 433 2358899988 754
No 152
>cd01533 4RHOD_Repeat_2 Member of the Rhodanese Homology Domain superfamily, repeat 2. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 2nd repeat which does contain the putative catalytic Cys residue.
Probab=26.25 E-value=2.9e+02 Score=20.84 Aligned_cols=90 Identities=16% Similarity=0.098 Sum_probs=47.6
Q ss_pred HhhCCCCCHHHHHHHHHHHHHHHhhCCCceeecCC-----cceeccCCCCHHHHHHHHHhcCCCCCCcEEeccCeecCCC
Q psy13699 15 LKRCDPIKESEVKALCAKAREILVEESNVQRIDSP-----VTVCGDIHGQFYDLKELFKVGGDVPETNYLFMGDFVDRGF 89 (308)
Q Consensus 15 ~~~~~~~~~~~~~~l~~~~~~il~~ep~l~~~~~~-----i~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~ 89 (308)
......++.+++.+++++. ....++.+..+ -.+-|=+|=.+..|...+......++..+|+. ...|.
T Consensus 6 ~~~~~~i~~~~l~~~~~~~-----~~~~liDvR~~~e~~~ghIpgainip~~~l~~~~~~l~~~~~~~ivv~---C~~G~ 77 (109)
T cd01533 6 VRHTPSVSADELAALQARG-----APLVVLDGRRFDEYRKMTIPGSVSCPGAELVLRVGELAPDPRTPIVVN---CAGRT 77 (109)
T ss_pred cccCCcCCHHHHHHHHhcC-----CCcEEEeCCCHHHHhcCcCCCceeCCHHHHHHHHHhcCCCCCCeEEEE---CCCCc
Confidence 3344456777766655321 01235555432 23344445456666666655544444556665 45677
Q ss_pred CcHHHHHHHHHhhhhCCCcEEEECC
Q psy13699 90 YSVETFLLLLALKVRYPDRITLIRG 114 (308)
Q Consensus 90 ~s~evl~~l~~lk~~~p~~v~~lrG 114 (308)
.|......|..+. +++.++.|.|
T Consensus 78 rs~~a~~~L~~~G--~~~~v~~l~g 100 (109)
T cd01533 78 RSIIGAQSLINAG--LPNPVAALRN 100 (109)
T ss_pred hHHHHHHHHHHCC--CCcceeEecC
Confidence 7776666665543 3222666655
No 153
>COG3958 Transketolase, C-terminal subunit [Carbohydrate transport and metabolism]
Probab=26.23 E-value=1.2e+02 Score=28.35 Aligned_cols=104 Identities=20% Similarity=0.274 Sum_probs=62.5
Q ss_pred HHHHHHhcCCCCCCcEEeccCeecCCCCcHHHHHHHHHhhhhCCCcEEEECCCcchhhhHhhhCChHHH----H---HHh
Q psy13699 63 LKELFKVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDEC----L---RKY 135 (308)
Q Consensus 63 L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~----~---~~~ 135 (308)
+-+.|..++....+-++..-|... |..+-.+ ...||+++ +-.|=-|+.++...-|..-.- . .-|
T Consensus 13 ~g~~L~~l~~~~~diVvl~ADl~~----St~~~~f----~~~fPdR~-~NvGIaEQ~mvg~AAGLA~~Gk~Pfv~tfa~F 83 (312)
T COG3958 13 YGETLAELGRKNSDIVVLDADLSS----STKTGYF----AKEFPDRF-FNVGIAEQDMVGTAAGLALAGKKPFVSTFAAF 83 (312)
T ss_pred HHHHHHHHHhcCCCEEEEeccccc----ccchhHH----HHhCchhh-eecchHHHHHHHHHHHHHhcCCCceeechHHH
Confidence 334455566667777888888753 3444333 45688875 567888887776544432111 1 111
Q ss_pred CCchhhhhhhHHhhccccceeEeCeEEEEcCCCCCCC-----CCHHHHH
Q psy13699 136 GSITVWRYCTEIFDYLSLSAIIDGRIFCVHGGLSPSI-----QTLDQIR 179 (308)
Q Consensus 136 ~~~~~~~~~~~~~~~LPl~~~i~~~~l~vHgGi~p~~-----~~~~~i~ 179 (308)
-..+-|+.+...+++.-+ +=|++++|+|++... +.+|+|.
T Consensus 84 ~s~Ra~EQir~~iay~~l----nVKiv~t~~G~t~g~dG~sHq~~EDia 128 (312)
T COG3958 84 LSRRAWEQIRNSIAYNNL----NVKIVATHAGVTYGEDGSSHQALEDIA 128 (312)
T ss_pred HHHHHHHHHHHHhhhccC----CeEEEEecCCcccCCCCccchhHHHHH
Confidence 123556666666655444 458999999998763 4577765
No 154
>COG1692 Calcineurin-like phosphoesterase [General function prediction only]
Probab=24.53 E-value=98 Score=28.31 Aligned_cols=12 Identities=17% Similarity=0.299 Sum_probs=6.7
Q ss_pred ceEEEeeccccc
Q psy13699 232 IDMICRAHQLVM 243 (308)
Q Consensus 232 l~~iirgH~~~~ 243 (308)
+..++.-|+.++
T Consensus 169 vsavvGTHTHV~ 180 (266)
T COG1692 169 VSAVVGTHTHVP 180 (266)
T ss_pred EEEEEeccCccc
Confidence 455666665543
No 155
>PF02671 PAH: Paired amphipathic helix repeat; InterPro: IPR003822 This family contains the paired amphipathic helix (PAH) repeat. The family contains the eukaryotic Sin3 proteins, which have at least three PAH domains (PAH1, PAH2, and PAH3). Sin3 proteins are components of a co-repressor complex that silences transcription, playing important roles in the transition between proliferation and differentiation. Sin3 proteins are recruited to the DNA by various DNA-binding transcription factors such as the Mad family of repressors, Mnt/Rox, PLZF, MeCP2, p53, REST/NRSF, MNFbeta, Sp1, TGIF and Ume6 []. Sin3 acts as a scaffold protein that in turn recruits histone-binding proteins RbAp46/RbAp48 and histone deacetylases HDAC1/HDAC2, which deacetylate the core histones resulting in a repressed state of the chromatin []. The PAH domains are protein-protein interaction domains through which Sin3 fulfils its role as a scaffold. The PAH2 domain of Sin3 can interact with a wide range of unrelated and structurally diverse transcription factors that bind using different interaction motifs. For example, the Sin3 PAH2 domain can interact with the unrelated Mad and HBP1 factors using alternative interaction motifs that involve binding in opposite helical orientations [].; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 1S5Q_B 2L9S_B 1G1E_B 1S5R_B 2CR7_A 2CZY_A 2LD7_B 2RMR_A 2RMS_A 1PD7_A ....
Probab=22.81 E-value=80 Score=20.47 Aligned_cols=38 Identities=18% Similarity=0.323 Sum_probs=23.3
Q ss_pred hhHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHhhCCCce
Q psy13699 3 EYIQDLDRQIEQLKRCDPIKESEVKALCAKAREILVEESNVQ 44 (308)
Q Consensus 3 ~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~il~~ep~l~ 44 (308)
+.+.+.-+++....+ ..++.++ +++++.++|...|.|+
T Consensus 2 ~~Y~~FL~il~~y~~-~~~~~~~---v~~~v~~Ll~~hpdLl 39 (47)
T PF02671_consen 2 EVYNEFLKILNDYKK-GRISRSE---VIEEVSELLRGHPDLL 39 (47)
T ss_dssp HHHHHHHHHHHHHHC-TCSCHHH---HHHHHHHHTTT-HHHH
T ss_pred hHHHHHHHHHHHHHh-cCCCHHH---HHHHHHHHHccCHHHH
Confidence 344454555555555 4566655 7778888888888765
No 156
>KOG3770|consensus
Probab=22.33 E-value=1.7e+02 Score=29.94 Aligned_cols=61 Identities=21% Similarity=0.234 Sum_probs=36.8
Q ss_pred HHHHHHhcCCC--CCCcEEeccCee--cCCCCcHH----HHHHHHH-hhhhCCC-cEEEECCCcchhhhHh
Q psy13699 63 LKELFKVGGDV--PETNYLFMGDFV--DRGFYSVE----TFLLLLA-LKVRYPD-RITLIRGNHESRQITQ 123 (308)
Q Consensus 63 L~~ll~~~~~~--~~~~~vfLGD~v--DrG~~s~e----vl~~l~~-lk~~~p~-~v~~lrGNHE~~~~~~ 123 (308)
+..+|+.+... .-|-++-.||++ |+++.+.+ ++..+.. +...+|+ -|+...||||-.-.+.
T Consensus 197 ies~L~~ike~~~~iD~I~wTGD~~~H~~w~~t~~~~l~~~~~l~~~~~e~FpdvpvypalGNhe~~P~N~ 267 (577)
T KOG3770|consen 197 IESALDHIKENHKDIDYIIWTGDNVAHDVWAQTEEENLSMLSRLTSLLSEYFPDVPVYPALGNHEIHPVNL 267 (577)
T ss_pred HHHHHHHHHhcCCCCCEEEEeCCCCcccchhhhHHHHHHHHHHHHHHHHHhCCCCceeeecccCCCCcHhh
Confidence 44455443322 257788999998 55665544 3322322 2334564 6899999999876653
No 157
>KOG3425|consensus
Probab=22.23 E-value=2.7e+02 Score=22.67 Aligned_cols=57 Identities=23% Similarity=0.233 Sum_probs=37.6
Q ss_pred HHHHHHHHHhcCCCCCCcEEeccCeecCCCCc-----H---HHHHHHHHhhhhCCCcEEEE---CCCcchh
Q psy13699 60 FYDLKELFKVGGDVPETNYLFMGDFVDRGFYS-----V---ETFLLLLALKVRYPDRITLI---RGNHESR 119 (308)
Q Consensus 60 ~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s-----~---evl~~l~~lk~~~p~~v~~l---rGNHE~~ 119 (308)
++.|++.++..+....-.++|+|+-.|++-+| + .|+.-.+ + .+|..+++| -||-+.+
T Consensus 12 ~e~~~~~~~~~~n~~~ifvlF~gskd~~tGqSWCPdCV~AEPvi~~al--k-~ap~~~~~v~v~VG~rp~W 79 (128)
T KOG3425|consen 12 YESFEETLKNVENGKTIFVLFLGSKDDTTGQSWCPDCVAAEPVINEAL--K-HAPEDVHFVHVYVGNRPYW 79 (128)
T ss_pred HHHHHHHHHHHhCCceEEEEEecccCCCCCCcCCchHHHhhHHHHHHH--H-hCCCceEEEEEEecCCCcc
Confidence 57788888877666666788999999988765 2 2333322 2 466666555 4676653
No 158
>PRK10773 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Reviewed
Probab=21.47 E-value=2.5e+02 Score=27.51 Aligned_cols=67 Identities=13% Similarity=0.122 Sum_probs=46.6
Q ss_pred cCCcceeccCCC-CHHHHHHHHHhcCCCCCCcEEeccCeecCCCCcHHHHHHHHHhhhhC-CCcEEEECC
Q psy13699 47 DSPVTVCGDIHG-QFYDLKELFKVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRY-PDRITLIRG 114 (308)
Q Consensus 47 ~~~i~viGDIHG-~~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~-p~~v~~lrG 114 (308)
...+.||=|-|. +.+.+.+.|+.....+..+++.+||+...|+.+.+.-.-+-+.-... .+.++++ |
T Consensus 324 ~~g~~iIDDsYn~nP~s~~aaL~~l~~~~~r~i~VlG~m~elG~~~~~~h~~~~~~~~~~~~d~v~~~-G 392 (453)
T PRK10773 324 AEGQLLLDDSYNANVGSMTAAAQVLAEMPGYRVMVVGDMAELGAESEACHRQVGEAAKAAGIDKVLSV-G 392 (453)
T ss_pred CCCeEEEEcCCCCCHHHHHHHHHHHHhCCCCEEEEECChhhcchHHHHHHHHHHHHHHHcCCCEEEEE-C
Confidence 345788999665 57888888876554344679999999999999988776665543332 3455544 6
No 159
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=21.37 E-value=2.7e+02 Score=21.50 Aligned_cols=42 Identities=29% Similarity=0.690 Sum_probs=26.0
Q ss_pred HHHHHHHhcCCCCCCcEEeccCeecCCCCcHHHHHHHHHhhhhCCCcEEEE
Q psy13699 62 DLKELFKVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLI 112 (308)
Q Consensus 62 ~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~l 112 (308)
.+.++++ .-+..++|++|| -|..-.|+..-+ ...||+++..+
T Consensus 54 ~i~~i~~---~fP~~kfiLIGD---sgq~DpeiY~~i---a~~~P~~i~ai 95 (100)
T PF09949_consen 54 NIERILR---DFPERKFILIGD---SGQHDPEIYAEI---ARRFPGRILAI 95 (100)
T ss_pred HHHHHHH---HCCCCcEEEEee---CCCcCHHHHHHH---HHHCCCCEEEE
Confidence 3444444 346778889988 455557776654 34678876543
No 160
>smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.
Probab=21.20 E-value=1.5e+02 Score=26.26 Aligned_cols=37 Identities=14% Similarity=0.275 Sum_probs=26.3
Q ss_pred hhhhhcCceEEEeecccccCCceeecCCeeEEEEeCCCC
Q psy13699 225 SFNAANNIDMICRAHQLVMEGYKWHFNETVLTVWSAPNY 263 (308)
Q Consensus 225 ~fl~~~~l~~iirgH~~~~~G~~~~~~~~~iTifSa~~y 263 (308)
+.+-..|++.||-||..+..+++. +++++| +||-=|+
T Consensus 199 ~~l~~~G~DvIiG~H~H~~~~~e~-~~~~~I-~YslGNf 235 (239)
T smart00854 199 HALIDAGADVVIGHHPHVLQPIEI-YKGKLI-AYSLGNF 235 (239)
T ss_pred HHHHHcCCCEEEcCCCCcCCceEE-ECCEEE-EEccccc
Confidence 333346999999999988888875 456655 5775444
No 161
>COG4320 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=21.14 E-value=61 Score=30.83 Aligned_cols=62 Identities=19% Similarity=0.223 Sum_probs=38.3
Q ss_pred HHHhhCCCceeecCCcceeccCC-CCHHHHHHHHHhcCCCCCCcEEeccCee--cCCCCcHHHHHHHHHhhh
Q psy13699 35 EILVEESNVQRIDSPVTVCGDIH-GQFYDLKELFKVGGDVPETNYLFMGDFV--DRGFYSVETFLLLLALKV 103 (308)
Q Consensus 35 ~il~~ep~l~~~~~~i~viGDIH-G~~~~L~~ll~~~~~~~~~~~vfLGD~v--DrG~~s~evl~~l~~lk~ 103 (308)
+-+++-|-.++-.+.+.++||.| ||+.++.. .....++-.-|+= --|+....++.+..+|..
T Consensus 44 ~~~~~~p~~lp~~p~tw~cGD~HLgN~ga~~~-------~~G~V~f~i~DFDe~~~g~~~~DlvRl~~Sl~~ 108 (410)
T COG4320 44 QDMKTWPWSLPKTPFTWLCGDAHLGNFGAARN-------SKGNVVFKIADFDEGHLGQYIWDLVRLAVSLVL 108 (410)
T ss_pred HHHhcCccccCCCCceEEecccccccchhhcc-------CCCceEEEecccchhhccchHHHHHHHHHHHHH
Confidence 34566676677778899999999 77665532 1122233355541 225666777777777653
Done!