Query psy13700
Match_columns 166
No_of_seqs 80 out of 82
Neff 3.0
Searched_HMMs 29240
Date Fri Aug 16 18:18:40 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13700.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13700hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kpa_A Probable ubiquitin fold 100.0 9.5E-95 3.2E-99 583.6 13.0 160 1-160 9-168 (168)
2 2z6o_A UFM1-conjugating enzyme 100.0 3.1E-78 1.1E-82 489.5 12.3 165 1-165 7-171 (172)
3 2h2y_A Ubiquitin-conjugating e 99.7 9E-17 3.1E-21 121.9 11.4 91 26-124 20-117 (136)
4 2fo3_A Ubiquitin-conjugating e 99.7 5.9E-17 2E-21 120.9 9.7 89 28-124 8-103 (125)
5 2a7l_A Hypothetical ubiquitin- 99.7 4.5E-17 1.5E-21 124.4 8.6 91 27-125 23-123 (136)
6 2c2v_B Ubiquitin-conjugating e 99.7 1.2E-16 4.2E-21 122.8 9.7 105 26-146 5-115 (154)
7 4gpr_A Ubiquitin-conjugating e 99.7 1.9E-16 6.3E-21 121.2 10.6 90 28-125 6-101 (151)
8 2ayv_A Ubiquitin-conjugating e 99.7 2.1E-16 7.2E-21 123.7 10.7 91 26-124 21-117 (166)
9 1zdn_A Ubiquitin-conjugating e 99.7 2.3E-16 7.8E-21 121.7 10.4 98 25-137 12-115 (158)
10 1z2u_A Ubiquitin-conjugating e 99.7 1.7E-16 5.7E-21 121.1 9.5 90 28-125 6-101 (150)
11 2r0j_A Ubiquitin carrier prote 99.7 1.6E-16 5.6E-21 121.3 9.3 89 28-124 3-97 (149)
12 2e2c_A Ubiquitin conjugating e 99.7 4.5E-16 1.5E-20 119.6 11.1 98 25-137 8-111 (156)
13 2c4o_A Ubiquitin-conjugating e 99.7 3E-16 1E-20 122.5 10.2 92 26-125 19-116 (165)
14 1jat_A Ubiquitin-conjugating e 99.7 2.2E-16 7.6E-21 121.2 9.1 101 26-142 5-111 (155)
15 3h8k_A Ubiquitin-conjugating e 99.7 5.4E-16 1.9E-20 119.5 10.4 83 27-117 4-90 (164)
16 1fxt_A Ubiquitin-conjugating e 99.7 4.3E-16 1.5E-20 118.7 9.3 91 28-125 3-100 (149)
17 3k9o_A Ubiquitin-conjugating e 99.6 3E-16 1E-20 125.1 8.4 108 28-147 7-120 (201)
18 1yh2_A HSPC150 protein similar 99.6 8.2E-16 2.8E-20 120.0 10.5 100 27-142 5-114 (169)
19 2ucz_A UBC7, ubiquitin conjuga 99.6 1.1E-15 3.8E-20 118.2 10.8 83 27-117 5-91 (165)
20 1yrv_A Ubiquitin-conjugating l 99.6 5.6E-16 1.9E-20 121.8 9.0 93 26-125 23-123 (169)
21 2aak_A UBC1, ubiquitin conjuga 99.6 6.7E-16 2.3E-20 118.0 9.0 91 27-125 5-101 (152)
22 3bzh_A Ubiquitin-conjugating e 99.6 1.2E-15 4E-20 122.7 10.6 105 26-146 48-158 (194)
23 3rcz_B SUMO-conjugating enzyme 99.6 8E-16 2.7E-20 120.1 8.9 93 25-125 9-114 (163)
24 2bep_A Ubiquitin-conjugating e 99.6 1E-15 3.5E-20 118.0 9.2 95 27-125 9-109 (159)
25 4ds2_A Ubiquitin-conjugating e 99.6 1.2E-15 4E-20 118.7 9.5 98 27-125 9-119 (167)
26 2f4z_A Tgtwinscan_2721 - E2 do 99.6 1.1E-15 3.8E-20 122.9 9.3 107 19-125 25-143 (193)
27 2awf_A Ubiquitin-conjugating e 99.6 3.6E-15 1.2E-19 117.1 11.1 85 25-117 16-104 (172)
28 2pwq_A Ubiquitin conjugating e 99.6 2.1E-15 7.3E-20 123.2 10.0 94 25-125 22-121 (216)
29 3rz3_A Ubiquitin-conjugating e 99.6 4.2E-15 1.4E-19 117.5 11.1 84 26-117 7-94 (183)
30 2y9m_A Ubiquitin-conjugating e 99.6 3E-15 1E-19 117.3 10.3 98 27-124 7-117 (172)
31 1ayz_A UBC2, ubiquitin-conjuga 99.6 2.2E-15 7.4E-20 118.3 9.0 90 27-124 5-100 (169)
32 3e46_A Ubiquitin-conjugating e 99.6 2.1E-15 7.1E-20 126.1 8.7 125 10-146 35-171 (253)
33 1i7k_A Ubiquitin-conjugating e 99.6 3.1E-15 1.1E-19 118.9 8.8 100 23-137 27-132 (179)
34 2gjd_A Ubiquitin-conjugating e 99.6 3.9E-15 1.3E-19 114.7 8.5 91 27-125 5-108 (157)
35 2f4w_A Ubiquitin-conjugating e 99.6 4.9E-15 1.7E-19 118.0 8.6 116 22-151 10-130 (187)
36 1tte_A Ubiquitin-conjugating e 99.6 7.2E-15 2.5E-19 120.0 9.2 91 28-125 4-101 (215)
37 2a4d_A Ubiquitin-conjugating e 99.6 1.1E-14 3.9E-19 114.2 9.6 92 27-125 26-129 (160)
38 3fn1_B NEDD8-conjugating enzym 99.6 8.7E-15 3E-19 113.3 8.6 92 25-125 13-117 (167)
39 1wzv_A Ubiquitin-conjugating e 99.6 2E-14 6.8E-19 110.1 10.4 95 28-137 6-107 (155)
40 1jat_B Ubiquitin-conjugating e 99.5 1.2E-14 4.1E-19 109.9 8.1 93 27-125 7-109 (138)
41 1y8x_A Ubiquitin-conjugating e 99.5 1.9E-14 6.4E-19 111.7 9.3 90 25-125 5-101 (160)
42 1zuo_A Hypothetical protein LO 99.5 3.8E-15 1.3E-19 118.8 5.5 96 26-125 27-141 (186)
43 2grr_A Ubiquitin-conjugating e 99.5 1.5E-14 5.1E-19 111.9 8.3 91 27-125 8-111 (161)
44 2onu_A Ubiquitin-conjugating e 99.5 4.7E-15 1.6E-19 114.2 5.3 86 29-124 5-96 (152)
45 2z5d_A Ubiquitin-conjugating e 99.5 1E-14 3.5E-19 116.3 6.8 92 26-127 25-121 (179)
46 1yf9_A Ubiquitin carrier prote 99.5 1.7E-14 5.6E-19 113.6 7.1 89 27-125 13-106 (171)
47 2hlw_A Ubiquitin-conjugating e 99.5 2.6E-14 8.8E-19 112.8 7.8 91 27-124 36-138 (170)
48 2nvu_C NEDD8-conjugating enzym 99.5 4.3E-14 1.5E-18 112.0 8.6 90 25-125 25-121 (180)
49 3o2u_A NEDD8-conjugating enzym 99.5 2.8E-14 9.7E-19 113.9 7.6 93 25-127 28-132 (190)
50 1c4z_D UBCH7, ubiquitin conjug 99.5 3.3E-14 1.1E-18 108.8 5.9 89 29-125 5-100 (154)
51 2q0v_A Ubiquitin-conjugating e 99.5 1.5E-13 5.3E-18 106.9 8.8 93 26-125 21-124 (156)
52 4ddg_A Ubiquitin-conjugating e 99.5 1.3E-13 4.3E-18 119.9 9.2 91 28-126 5-101 (399)
53 3ceg_A Baculoviral IAP repeat- 99.4 6.8E-13 2.3E-17 115.0 10.2 101 19-124 69-188 (323)
54 3r3q_A Suppressor protein STP2 98.0 1.6E-05 5.6E-10 62.9 7.2 63 59-122 57-138 (162)
55 3obq_A Tumor susceptibility ge 97.4 0.00025 8.7E-09 55.3 5.6 93 27-122 21-120 (146)
56 1ukx_A GCN2, GCN2 EIF2alpha ki 95.3 0.06 2.1E-06 39.0 7.0 68 25-98 9-84 (137)
57 2ebm_A RWD domain-containing p 94.0 0.033 1.1E-06 40.1 2.9 23 77-99 55-77 (128)
58 2yz0_A Serine/threonine-protei 93.2 0.057 2E-06 39.4 3.0 24 76-99 61-84 (138)
59 2ebk_A RWD domain-containing p 93.1 0.054 1.8E-06 39.2 2.7 23 77-99 56-78 (128)
60 2day_A Ring finger protein 25; 93.0 0.063 2.1E-06 38.6 2.9 23 77-99 59-81 (128)
61 2dax_A Protein C21ORF6; RWD do 92.8 0.058 2E-06 40.4 2.6 24 77-100 73-96 (152)
62 2daw_A RWD domain containing p 91.2 0.13 4.4E-06 39.0 2.9 22 78-99 76-97 (154)
63 3zqs_A E3 ubiquitin-protein li 59.6 13 0.00045 29.9 5.0 44 51-97 14-58 (186)
64 3t98_B Nucleoporin NUP58/NUP45 35.0 24 0.00083 25.4 2.6 17 27-43 73-89 (93)
65 2j5d_A BNIP3 TM, BCL2/adenovir 22.0 24 0.00083 23.0 0.5 17 128-144 21-37 (45)
66 2a6z_A EMP47P (FORM2); beta sa 20.2 67 0.0023 25.5 2.9 34 50-86 36-70 (222)
No 1
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=100.00 E-value=9.5e-95 Score=583.57 Aligned_cols=160 Identities=64% Similarity=1.272 Sum_probs=156.0
Q ss_pred CChhhhhhhccccceeccCCCCCCChHHHHHHHHHHHHHHHHHhcccCCCCceEeeeCCCCCeeEEEeeceecccceeEE
Q psy13700 1 MDESSKKTLSSIPLLKTKAGPRDKDLWPKRLKEEYVALIEYVKNNKAADNDWFRLESNKEGTKWFGSCWFFYNQLKYEFQ 80 (166)
Q Consensus 1 ~d~~~~~~~~~ipl~~~~agprd~~~w~~RLkeEY~aLikyv~~nk~~d~dwf~Lepn~dgTrW~gkcw~~~~~~kyeF~ 80 (166)
|+++.+++|++||||+|||||||+++|++||||||++||+||++||++|||||+++||++||+|+|+|||+|++.+|+|+
T Consensus 9 ~~~~~~~~~~~ipll~t~agPrd~~~w~~RlkeEy~alI~yv~~nK~~d~dWf~~~sn~~GT~W~G~cw~~~~~~kyeFk 88 (168)
T 3kpa_A 9 MEPSVKESVSRIPLLKTKAGPRDGDKWTARLKEEYASLITYVEHNKASDSHWFHLESNPQGTRWYGTCWTYYKNEKYEFE 88 (168)
T ss_dssp ---CHHHHHTTSCCCCCCCCTTSTHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEE
T ss_pred cChHHHHHHhhCceeeccCCCCCHHHHHHHHHHHHHHHHHHHHhcccccCCeeeecCCCCCCcccCccceeeccceeEEE
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCCCCCeeecCCCCCcccccccCceeecCCCCchhhcccCCchhHHHHHhhcccchhhhhhhhHHHhccccc
Q psy13700 81 IEFDIPITFPTTAPELALPELDGKTAKMYRGGKICLSDHFKPLWARNVPKFGIAHAMALGLGPWLAVEIPALVDAGIIKY 160 (166)
Q Consensus 81 lefdIP~tYP~tpPei~fpeldgkt~kmYrgGkICLddHf~PlW~~n~p~fgiaha~algl~pwla~eip~lv~~g~i~~ 160 (166)
|+|+||++||++||+|+||++||+|+||||||+||||+||+|+|+|||||||||||||||||||||||||+||++|+|++
T Consensus 89 LefdiP~tYP~tPPeI~Fp~ldgkt~kmYr~GkICLdIhwkPlW~~n~P~fGiahalalgl~pwla~eiP~lv~~g~i~~ 168 (168)
T 3kpa_A 89 MNFDIPVTYPQAPPEIALPELEGKTVKMYRGGKICMTTHFFPLWARNVPYFGISHVLALGLGPWLSIEVPAMVEEGYLKP 168 (168)
T ss_dssp EEEECCTTTTTSCCCCBCGGGTTTCSSEETTTEECCCTTHHHHHHHTTTTCCHHHHHHHTHHHHHHHHHHHHHHHTSCCC
T ss_pred EEEeCCccCCCCCCEeecccccCcCccccCCCcEEeccccchhhHhcCCchhHHHHHHhccchHHhhhhHHHHHcCCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999985
No 2
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=100.00 E-value=3.1e-78 Score=489.49 Aligned_cols=165 Identities=74% Similarity=1.363 Sum_probs=162.0
Q ss_pred CChhhhhhhccccceeccCCCCCCChHHHHHHHHHHHHHHHHHhcccCCCCceEeeeCCCCCeeEEEeeceecccceeEE
Q psy13700 1 MDESSKKTLSSIPLLKTKAGPRDKDLWPKRLKEEYVALIEYVKNNKAADNDWFRLESNKEGTKWFGSCWFFYNQLKYEFQ 80 (166)
Q Consensus 1 ~d~~~~~~~~~ipl~~~~agprd~~~w~~RLkeEY~aLikyv~~nk~~d~dwf~Lepn~dgTrW~gkcw~~~~~~kyeF~ 80 (166)
||++|+++|++||||+|+|||||+++|++||+|||++|++|++.||+++++||.+.++++||.|+|.||++|+|.+|+|+
T Consensus 7 ~~~~~~~~~~~ip~m~t~a~p~~~~~w~~RL~eE~k~L~k~v~p~k~n~~~W~~ii~Gp~gT~WeGgcw~~~~~~~y~F~ 86 (172)
T 2z6o_A 7 ADEATRRVVSEIPVLKTNAGPRDRELWVQRLKEEYQSLIRYVENNKNADNDWFRLESNKEGTRWFGKCWYIHDLLKYEFD 86 (172)
T ss_dssp HHHHHHHHHTTSCCCCCCCCTTCTHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEE
T ss_pred hhHHHHHHHHhCcccccccCCCccHHHHHHHHHHHHHHHHHhccCccccceeEEeecCCCCCcccCcccccccccceEEE
Confidence 58899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCCCCCeeecCCCCCcccccccCceeecCCCCchhhcccCCchhHHHHHhhcccchhhhhhhhHHHhccccc
Q psy13700 81 IEFDIPITFPTTAPELALPELDGKTAKMYRGGKICLSDHFKPLWARNVPKFGIAHAMALGLGPWLAVEIPALVDAGIIKY 160 (166)
Q Consensus 81 lefdIP~tYP~tpPei~fpeldgkt~kmYrgGkICLddHf~PlW~~n~p~fgiaha~algl~pwla~eip~lv~~g~i~~ 160 (166)
|+|+||++||++||+|+||++++++.+|||+|+||||+||+|+|++|+|+|||+|+||||||||||||||+||++|+|+|
T Consensus 87 L~~~fPe~YP~~PPeV~F~~~~~~hpnmY~~G~ICLdIL~kp~Ws~~~P~~~IahiL~lgl~pwla~eip~lv~~~~~~~ 166 (172)
T 2z6o_A 87 IEFDIPITYPTTAPEIAVPELDGKTAKMYRGGKICLTDHFKPLWARNVPKFGLAHLMALGLGPWLAVEIPDLIQKGVIQH 166 (172)
T ss_dssp EEEECCTTTTTSCCCCBCGGGTTTCSSBCTTSBBCCCTTHHHHHHHHTTSCCHHHHHHHTHHHHHHHHHHHHHHHTCSCC
T ss_pred EEEECCCCCCCCCCeeeeCCCCCCCCCCCCCCcEechhhccccccccCCccCHHHHHhhccCchhhhhhHHHHHcCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccC
Q psy13700 161 QEKTE 165 (166)
Q Consensus 161 ~~~~~ 165 (166)
+++..
T Consensus 167 ~~~~~ 171 (172)
T 2z6o_A 167 KEKCN 171 (172)
T ss_dssp SEECC
T ss_pred hhhcc
Confidence 98753
No 3
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=99.71 E-value=9e-17 Score=121.87 Aligned_cols=91 Identities=18% Similarity=0.243 Sum_probs=79.0
Q ss_pred hHHHHHHHHHHHHHHHHHhcccCCCCceEeee-CCCCCeeEEEeec--eecccceeEEEEEecCCCCCCCCCeeecCCCC
Q psy13700 26 LWPKRLKEEYVALIEYVKNNKAADNDWFRLES-NKEGTKWFGSCWF--FYNQLKYEFQIEFDIPITFPTTAPELALPELD 102 (166)
Q Consensus 26 ~w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep-n~dgTrW~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPei~fpeld 102 (166)
....||.+||+.|.+ +....|++.+ +++..+|.+.+-| .++|++-.|.++|.+|.+||..||.|+|-.-.
T Consensus 20 ~~~~RL~kEl~~l~~-------~~~~~~~~~~~~~nl~~W~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i 92 (136)
T 2h2y_A 20 NANYRIQKELNNFLK-------NPPINCTIDVHPSNIRIWIVQYVGLENTIYANEVYKIKIIFPDNYPLKPPIVYFLQKP 92 (136)
T ss_dssp SHHHHHHHHHHHHHH-------SCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSC
T ss_pred HHHHHHHHHHHHHHh-------CCCCCeEEEeccccccccEEEEECCCCCceeCCEEEEEEEeCCCCCCCCCEEEEeCCC
Confidence 478999999999876 2345577766 5789999999988 89999999999999999999999999998765
Q ss_pred -CcccccccCceeecC---CCCchhh
Q psy13700 103 -GKTAKMYRGGKICLS---DHFKPLW 124 (166)
Q Consensus 103 -gkt~kmYrgGkICLd---dHf~PlW 124 (166)
.|+|+ |.+|+|||+ +.|+|.|
T Consensus 93 ~~HPnv-~~~G~ICl~iL~~~WsP~~ 117 (136)
T 2h2y_A 93 PKHTHV-YSNGDICLSVLGDDYNPSL 117 (136)
T ss_dssp CCCTTB-CTTCCBCCGGGTTTCCTTC
T ss_pred CCCCcC-CCCCEEECccccCCCCCCC
Confidence 89998 679999998 6788775
No 4
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=99.70 E-value=5.9e-17 Score=120.91 Aligned_cols=89 Identities=18% Similarity=0.273 Sum_probs=76.6
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCceEeee-CCCCCeeEEEeec--eecccceeEEEEEecCCCCCCCCCeeecCCCC-C
Q psy13700 28 PKRLKEEYVALIEYVKNNKAADNDWFRLES-NKEGTKWFGSCWF--FYNQLKYEFQIEFDIPITFPTTAPELALPELD-G 103 (166)
Q Consensus 28 ~~RLkeEY~aLikyv~~nk~~d~dwf~Lep-n~dgTrW~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPei~fpeld-g 103 (166)
..||.+||+.|.+ +....+++.+ ++|..+|.+.+-| +++|++-.|.++|.+|.+||..||.|+|-.-. .
T Consensus 8 ~~RL~kEl~~l~~-------~~~~~~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~ 80 (125)
T 2fo3_A 8 NYRIQKELHNFLN-------NPPINCTLDVHPNNIRIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQKPPK 80 (125)
T ss_dssp -CHHHHHHHHHHH-------SCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCC
T ss_pred HHHHHHHHHHHHh-------CCCCCEEEEeCcchhhhhheEEeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEeCCCCC
Confidence 4699999999876 2334576766 5789999999988 89999999999999999999999999998865 8
Q ss_pred cccccccCceeecC---CCCchhh
Q psy13700 104 KTAKMYRGGKICLS---DHFKPLW 124 (166)
Q Consensus 104 kt~kmYrgGkICLd---dHf~PlW 124 (166)
|+|+ |.+|+|||+ +.|+|.|
T Consensus 81 HPnv-~~~G~iCl~iL~~~W~P~~ 103 (125)
T 2fo3_A 81 HTHV-YSNGDICLSLLGDDYNPSL 103 (125)
T ss_dssp BTTB-CTTSBBCCGGGTTTCCTTC
T ss_pred CCcC-CCCCEEEchhcCCCCCCCC
Confidence 9998 589999998 6788765
No 5
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=99.70 E-value=4.5e-17 Score=124.41 Aligned_cols=91 Identities=24% Similarity=0.353 Sum_probs=77.8
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCCceEe--ee-CCCCCeeEEEeec--eecccceeEEEEEecCCCCCCCCCeeecCCC
Q psy13700 27 WPKRLKEEYVALIEYVKNNKAADNDWFRL--ES-NKEGTKWFGSCWF--FYNQLKYEFQIEFDIPITFPTTAPELALPEL 101 (166)
Q Consensus 27 w~~RLkeEY~aLikyv~~nk~~d~dwf~L--ep-n~dgTrW~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPei~fpel 101 (166)
...||.+||+.|.+ +....|++ .+ ++|..+|.+.+-+ +++|++-.|.++|.+|.+||..||.|+|-..
T Consensus 23 ~~~RL~kEl~~l~~-------~~~~gi~v~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~ 95 (136)
T 2a7l_A 23 MQKRLQKELLALQN-------DPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGE 95 (136)
T ss_dssp SCHHHHHHHHHHHH-------SCCTTCCCCTTCCCCSCEEEEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEESS
T ss_pred HHHHHHHHHHHHHh-------CCCCCEEEEEeeCccccceeEEEEECCCCCccccEEEEEEEECCCCCCCCCCEEEEeCC
Confidence 34899999999876 23345553 35 5789999999998 8999999999999999999999999999887
Q ss_pred CC--cccccccCceeecC---CCCchhhc
Q psy13700 102 DG--KTAKMYRGGKICLS---DHFKPLWA 125 (166)
Q Consensus 102 dg--kt~kmYrgGkICLd---dHf~PlW~ 125 (166)
.. |+|+ |.+|+|||+ +.|+|.|+
T Consensus 96 i~~~HPNV-~~~G~ICL~iL~~~WsP~~t 123 (136)
T 2a7l_A 96 NIPVHPHV-YSNGHICLSILTEDWSPALS 123 (136)
T ss_dssp CCCCBTTB-CTTCBBCCGGGTTTCCTTSC
T ss_pred CcCCCccC-CCCCeEEchhcCCCCCCCCc
Confidence 77 9998 579999998 78999874
No 6
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=99.68 E-value=1.2e-16 Score=122.79 Aligned_cols=105 Identities=19% Similarity=0.247 Sum_probs=87.0
Q ss_pred hHHHHHHHHHHHHHHHHHhcccCCCCceEeee-CCCCCeeEEEeec--eecccceeEEEEEecCCCCCCCCCeeecCCCC
Q psy13700 26 LWPKRLKEEYVALIEYVKNNKAADNDWFRLES-NKEGTKWFGSCWF--FYNQLKYEFQIEFDIPITFPTTAPELALPELD 102 (166)
Q Consensus 26 ~w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep-n~dgTrW~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPei~fpeld 102 (166)
....||.+||+.|.+ +....|++.+ +++..+|.+.+-| .++|++-.|.++|.+|.+||..||.|+|-.-.
T Consensus 5 ~~~~RL~kEl~~l~~-------~~~~~i~~~~~~~~l~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i 77 (154)
T 2c2v_B 5 GLPRRIIKETQRLLA-------EPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKI 77 (154)
T ss_dssp SCCHHHHHHHHHHHH-------SCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCC
T ss_pred HHHHHHHHHHHHHHh-------CCCCCEEEEECCCchheEEEEEECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEeecCc
Confidence 357899999999876 2345677767 5799999999988 89999999999999999999999999999888
Q ss_pred CcccccccCceeecC---CCCchhhcccCCchhHHHHHhhcccchhh
Q psy13700 103 GKTAKMYRGGKICLS---DHFKPLWARNVPKFGIAHAMALGLGPWLA 146 (166)
Q Consensus 103 gkt~kmYrgGkICLd---dHf~PlW~~n~p~fgiaha~algl~pwla 146 (166)
-|+|+ |.+|+|||+ +.|+|.| +|.+.| ++|--.|+
T Consensus 78 ~HPnv-~~~G~iCl~iL~~~W~p~~-------~i~~vl-~~i~~ll~ 115 (154)
T 2c2v_B 78 YHPNV-DKLGRICLDILKDKWSPAL-------QIRTVL-LSIQALLS 115 (154)
T ss_dssp CCTTB-CTTCBBCCHHHHTSCCTTC-------CHHHHH-HHHHHHTT
T ss_pred ccCcC-ccCCeEEchhccCCCCCCC-------cHHHHH-HHHHHHHh
Confidence 99999 688999998 7888765 576665 45544443
No 7
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=99.68 E-value=1.9e-16 Score=121.24 Aligned_cols=90 Identities=16% Similarity=0.234 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCceEeee-CCCCCeeEEEeec--eecccceeEEEEEecCCCCCCCCCeeecCCCCCc
Q psy13700 28 PKRLKEEYVALIEYVKNNKAADNDWFRLES-NKEGTKWFGSCWF--FYNQLKYEFQIEFDIPITFPTTAPELALPELDGK 104 (166)
Q Consensus 28 ~~RLkeEY~aLikyv~~nk~~d~dwf~Lep-n~dgTrW~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPei~fpeldgk 104 (166)
.+||.+||+.|.+ +..+.|++.+ ++|.++|.+.+-| +++|++..|.++|.+|.+||..||.|+|-.-..|
T Consensus 6 ~~RL~kEl~~l~~-------~~~~~i~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~H 78 (151)
T 4gpr_A 6 MRRIQKELREIQQ-------DPPCNCSAGPVGDDIFHWTATITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFMTKVYH 78 (151)
T ss_dssp HHHHHHHHHHHHH-------SCCTTEEEEESSSCTTEEEEEEECCSSSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCB
T ss_pred HHHHHHHHHHHHh-------CCCCCEEEEEcCCCceEEEEEEeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEecCccc
Confidence 6899999999876 3356677777 6899999999998 8999999999999999999999999999888899
Q ss_pred ccccccCceeecC---CCCchhhc
Q psy13700 105 TAKMYRGGKICLS---DHFKPLWA 125 (166)
Q Consensus 105 t~kmYrgGkICLd---dHf~PlW~ 125 (166)
+|+. .+|+|||+ +.|+|.|+
T Consensus 79 Pnv~-~~G~iCl~iL~~~W~p~~~ 101 (151)
T 4gpr_A 79 PNIN-KNGVICLDILKDQWSPALT 101 (151)
T ss_dssp TTBC-TTCBBCCGGGTTTCCTTCC
T ss_pred ceEC-CCCEEEcccccCCCCCCCc
Confidence 9995 79999998 78888764
No 8
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=99.68 E-value=2.1e-16 Score=123.71 Aligned_cols=91 Identities=16% Similarity=0.193 Sum_probs=80.2
Q ss_pred hHHHHHHHHHHHHHHHHHhcccCCCCceEeee-CCCCCeeEEEeec--eecccceeEEEEEecCCCCCCCCCeeecCCCC
Q psy13700 26 LWPKRLKEEYVALIEYVKNNKAADNDWFRLES-NKEGTKWFGSCWF--FYNQLKYEFQIEFDIPITFPTTAPELALPELD 102 (166)
Q Consensus 26 ~w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep-n~dgTrW~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPei~fpeld 102 (166)
....||.+||+.|.+ +....|.+.+ +++...|.+.+-| .++|++-.|.++|.+|.+||..||.|+|-.-.
T Consensus 21 ~~~~RL~kEl~~l~~-------~~~~gi~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i 93 (166)
T 2ayv_A 21 GALKRINKELNDLSK-------DPPTNCSAGPVGDDMFHWQATIMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFTTKI 93 (166)
T ss_dssp THHHHHHHHHHHHHH-------SCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCC
T ss_pred HHHHHHHHHHHHHHh-------CCCCCEEEEEcCCCcceeeEEEECCCCCCcCCCEEEEEEeCCCcCCCCCceeeeccCC
Confidence 478999999999976 3446677777 5789999999998 89999999999999999999999999999888
Q ss_pred CcccccccCceeecC---CCCchhh
Q psy13700 103 GKTAKMYRGGKICLS---DHFKPLW 124 (166)
Q Consensus 103 gkt~kmYrgGkICLd---dHf~PlW 124 (166)
.|+|+ |.+|+|||+ +.|+|.|
T Consensus 94 ~HPNI-~~~G~ICL~iL~~~WsP~~ 117 (166)
T 2ayv_A 94 YHPNI-NSQGAICLDILKDQWSPAL 117 (166)
T ss_dssp CBTTB-CTTCBBCCGGGTTTCCTTC
T ss_pred cCCcC-CCCCeEEcccccccCCCCC
Confidence 99998 579999998 6788776
No 9
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=99.68 E-value=2.3e-16 Score=121.74 Aligned_cols=98 Identities=14% Similarity=0.096 Sum_probs=83.4
Q ss_pred ChHHHHHHHHHHHHHHHHHhcccCCCCceEeee-CCCCCeeEEEeec--eecccceeEEEEEecCCCCCCCCCeeecCCC
Q psy13700 25 DLWPKRLKEEYVALIEYVKNNKAADNDWFRLES-NKEGTKWFGSCWF--FYNQLKYEFQIEFDIPITFPTTAPELALPEL 101 (166)
Q Consensus 25 ~~w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep-n~dgTrW~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPei~fpel 101 (166)
.....||.+||+.|.+ +..+.|++.+ +++.++|.+.+-| +++|++-.|.++|.+|.+||..||.|+|-.-
T Consensus 12 ~~~~~RL~kEl~~l~~-------~~~~gi~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 84 (158)
T 1zdn_A 12 PHIIRLVYKEVTTLTA-------DPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTK 84 (158)
T ss_dssp HHHHHHHHHHHHHHHH-------SCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSC
T ss_pred HHHHHHHHHHHHHHHh-------CCCCCEEEEECCCChhheeEEEECCCCCCccCcEEEEEEEcCCCCCCCCCEEEeccC
Confidence 4588999999999876 2346677777 6889999999988 8999999999999999999999999999888
Q ss_pred CCcccccccCceeecC---CCCchhhcccCCchhHHHHH
Q psy13700 102 DGKTAKMYRGGKICLS---DHFKPLWARNVPKFGIAHAM 137 (166)
Q Consensus 102 dgkt~kmYrgGkICLd---dHf~PlW~~n~p~fgiaha~ 137 (166)
..|+|+ |.+|+|||+ +.|+|.| +|.+.|
T Consensus 85 i~HPnv-~~~G~iCl~iL~~~W~p~~-------~i~~vL 115 (158)
T 1zdn_A 85 IFHPNV-GANGEICVNVLKRDWTAEL-------GIRHVL 115 (158)
T ss_dssp CCCTTB-CTTSBBCHHHHTTTCCTTC-------CHHHHH
T ss_pred cccCCC-CCCCEEehhhcCCCCCCCC-------cHHHHH
Confidence 899998 567999997 6788765 566654
No 10
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=99.67 E-value=1.7e-16 Score=121.15 Aligned_cols=90 Identities=17% Similarity=0.224 Sum_probs=78.4
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCceEeee-CCCCCeeEEEeec--eecccceeEEEEEecCCCCCCCCCeeecCCCCCc
Q psy13700 28 PKRLKEEYVALIEYVKNNKAADNDWFRLES-NKEGTKWFGSCWF--FYNQLKYEFQIEFDIPITFPTTAPELALPELDGK 104 (166)
Q Consensus 28 ~~RLkeEY~aLikyv~~nk~~d~dwf~Lep-n~dgTrW~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPei~fpeldgk 104 (166)
.+||.+||+.|.+ +....|++.+ +++.+.|.+.+-| .++|++-.|.++|.+|.+||..||.|+|-.---|
T Consensus 6 ~~RL~kEl~~l~~-------~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 78 (150)
T 1z2u_A 6 LKRIQKELQDLGR-------DPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYH 78 (150)
T ss_dssp HHHHHHHHHHHHH-------SCCSSEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCB
T ss_pred HHHHHHHHHHHHh-------CCCCCEEEEECCCcceEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEecCccc
Confidence 5799999999976 3446777777 6789999999998 8999999999999999999999999999877789
Q ss_pred ccccccCceeecC---CCCchhhc
Q psy13700 105 TAKMYRGGKICLS---DHFKPLWA 125 (166)
Q Consensus 105 t~kmYrgGkICLd---dHf~PlW~ 125 (166)
+|+ |.+|+|||+ +.|+|.|+
T Consensus 79 Pnv-~~~G~iCl~iL~~~W~p~~~ 101 (150)
T 1z2u_A 79 PNI-NSNGSICLDILRSQWSPALT 101 (150)
T ss_dssp TTB-CTTCBBCCGGGTTTCCTTCC
T ss_pred CcC-CCCCeEeeccccCCCCCCCC
Confidence 998 579999998 67887653
No 11
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=99.67 E-value=1.6e-16 Score=121.31 Aligned_cols=89 Identities=16% Similarity=0.171 Sum_probs=77.6
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCceEeee-CCCCCeeEEEeec--eecccceeEEEEEecCCCCCCCCCeeecCCCCCc
Q psy13700 28 PKRLKEEYVALIEYVKNNKAADNDWFRLES-NKEGTKWFGSCWF--FYNQLKYEFQIEFDIPITFPTTAPELALPELDGK 104 (166)
Q Consensus 28 ~~RLkeEY~aLikyv~~nk~~d~dwf~Lep-n~dgTrW~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPei~fpeldgk 104 (166)
.+||.+||+.|.+ +....|++.+ +++..+|.+.+-| +++|++-.|.++|.+|.+||..||.|+|-.-..|
T Consensus 3 ~~RL~kEl~~l~~-------~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 75 (149)
T 2r0j_A 3 PRRITKETQNLAN-------EPPPGIMAVPVPENYRHFNILINGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFLTKIYH 75 (149)
T ss_dssp CHHHHHHHHHHHH-------SCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSCCCB
T ss_pred HHHHHHHHHHHHh-------CCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEeCCcccCCCCCeeEeccCCcc
Confidence 3799999999876 2345677776 6789999999988 8999999999999999999999999999888899
Q ss_pred ccccccCceeecC---CCCchhh
Q psy13700 105 TAKMYRGGKICLS---DHFKPLW 124 (166)
Q Consensus 105 t~kmYrgGkICLd---dHf~PlW 124 (166)
+|+. .+|+|||+ +.|+|.|
T Consensus 76 Pnv~-~~G~iCl~iL~~~W~p~~ 97 (149)
T 2r0j_A 76 PNID-KLGRICLDILKDKWSPAL 97 (149)
T ss_dssp TTBC-TTCBBCCGGGTTTCCTTS
T ss_pred CCCC-CCCEEechhcCCCCCCCC
Confidence 9985 67999998 6788766
No 12
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=99.67 E-value=4.5e-16 Score=119.65 Aligned_cols=98 Identities=14% Similarity=0.246 Sum_probs=82.6
Q ss_pred ChHHHHHHHHHHHHHHHHHhcccCCCCceEeee-CCCCCeeEEEeec--eecccceeEEEEEecCCCCCCCCCeeecCCC
Q psy13700 25 DLWPKRLKEEYVALIEYVKNNKAADNDWFRLES-NKEGTKWFGSCWF--FYNQLKYEFQIEFDIPITFPTTAPELALPEL 101 (166)
Q Consensus 25 ~~w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep-n~dgTrW~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPei~fpel 101 (166)
.....||.+||+.|.+. ....|++.+ +++..+|.+.+-| .++|++-.|.++|.+|.+||..||.|+|-.-
T Consensus 8 ~~~~~RL~kEl~~l~~~-------~~~~i~~~p~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 80 (156)
T 2e2c_A 8 HSVSKRLQQELRTLLMS-------GDPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTP 80 (156)
T ss_dssp CCHHHHHHHHHHHHHHH-------CCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSC
T ss_pred hHHHHHHHHHHHHHHhC-------CCCCEEEEECCCCccEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCC
Confidence 34789999999999762 235677776 5789999999998 8999999999999999999999999999888
Q ss_pred CCcccccccCceeecC---CCCchhhcccCCchhHHHHH
Q psy13700 102 DGKTAKMYRGGKICLS---DHFKPLWARNVPKFGIAHAM 137 (166)
Q Consensus 102 dgkt~kmYrgGkICLd---dHf~PlW~~n~p~fgiaha~ 137 (166)
..|+|+. .+|+|||+ +.|+|.| +|.+.|
T Consensus 81 i~HPnv~-~~G~iCl~iL~~~W~p~~-------~i~~vL 111 (156)
T 2e2c_A 81 CWHPNVD-QSGNICLDILKENWTASY-------DVRTIL 111 (156)
T ss_dssp CCBTTBC-TTCBBCCGGGTTTCCTTC-------CHHHHH
T ss_pred cccCCCc-cCceEECccccccCCCCC-------cHHHHH
Confidence 8999985 58999998 5676654 666665
No 13
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=99.67 E-value=3e-16 Score=122.47 Aligned_cols=92 Identities=16% Similarity=0.225 Sum_probs=79.8
Q ss_pred hHHHHHHHHHHHHHHHHHhcccCCCCceEeee-CCCCCeeEEEeec--eecccceeEEEEEecCCCCCCCCCeeecCCCC
Q psy13700 26 LWPKRLKEEYVALIEYVKNNKAADNDWFRLES-NKEGTKWFGSCWF--FYNQLKYEFQIEFDIPITFPTTAPELALPELD 102 (166)
Q Consensus 26 ~w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep-n~dgTrW~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPei~fpeld 102 (166)
....||.+||+.|.+ +....|++.+ ++|.+.|.+.+-| +++|++-.|.++|.+|.+||..||.|.|-..-
T Consensus 19 ~~~~RL~kEl~~l~~-------~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~T~i 91 (165)
T 2c4o_A 19 MALKRIHKELNDLAR-------DPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRI 91 (165)
T ss_dssp HHHHHHHHHHHHHHS-------SCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCC
T ss_pred HHHHHHHHHHHHHHh-------CCCCCEEEEEcCCCcceeEEEEECCCCCCccCceEEEEEECCCcCCCCCCEEEEecCC
Confidence 478999999999865 3456677777 6889999999998 89999999999999999999999999998877
Q ss_pred CcccccccCceeecC---CCCchhhc
Q psy13700 103 GKTAKMYRGGKICLS---DHFKPLWA 125 (166)
Q Consensus 103 gkt~kmYrgGkICLd---dHf~PlW~ 125 (166)
-|+|+ |.+|+|||+ +.|+|.|+
T Consensus 92 ~HPnV-~~~G~ICl~iL~~~W~P~~t 116 (165)
T 2c4o_A 92 YHPNI-NSNGSICLDILRSQWSPALT 116 (165)
T ss_dssp CBTTB-CTTCBBCCGGGTTTCCTTCC
T ss_pred cCCcC-CCCCeEeehhhcCCCCCcCc
Confidence 89998 479999998 67887653
No 14
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=99.66 E-value=2.2e-16 Score=121.23 Aligned_cols=101 Identities=20% Similarity=0.227 Sum_probs=85.2
Q ss_pred hHHHHHHHHHHHHHHHHHhcccCCCCceEeee-CCCCCeeEEEeec--eecccceeEEEEEecCCCCCCCCCeeecCCCC
Q psy13700 26 LWPKRLKEEYVALIEYVKNNKAADNDWFRLES-NKEGTKWFGSCWF--FYNQLKYEFQIEFDIPITFPTTAPELALPELD 102 (166)
Q Consensus 26 ~w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep-n~dgTrW~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPei~fpeld 102 (166)
....||.+||+.|.+ +....|++.+ +++..+|.+.+-| +++|++-.|.++|.+|.+||..||.|+|-.-.
T Consensus 5 ~~~~RL~kE~~~l~~-------~~~~~i~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i 77 (155)
T 1jat_A 5 SLPKRIIKETEKLVS-------DPVPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKI 77 (155)
T ss_dssp SCCHHHHHHHHHHHH-------SCCTTEEEEEETTEEEEEEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEECSCC
T ss_pred HHHHHHHHHHHHHHh-------CCCCCEEEEECCCchhEEEEEEECCCCCCccCcEEEEEEEcCCCCCCCCCcceeeccc
Confidence 356899999999976 3456787777 6789999999988 89999999999999999999999999998877
Q ss_pred CcccccccCceeecC---CCCchhhcccCCchhHHHHHhhccc
Q psy13700 103 GKTAKMYRGGKICLS---DHFKPLWARNVPKFGIAHAMALGLG 142 (166)
Q Consensus 103 gkt~kmYrgGkICLd---dHf~PlW~~n~p~fgiaha~algl~ 142 (166)
-|+|+. .+|+|||+ +.|+|.| +|.+.| ++|-
T Consensus 78 ~HPnv~-~~G~iCl~iL~~~W~p~~-------~i~~vl-~~i~ 111 (155)
T 1jat_A 78 YHPNID-RLGRICLDVLKTNWSPAL-------QIRTVL-LSIQ 111 (155)
T ss_dssp CBTTBC-TTCCBCCGGGTTTCCTTC-------CHHHHH-HHHH
T ss_pred ccCCCC-CCCEEEchhhccCCCCCC-------CHHHHH-HHHH
Confidence 999986 99999998 6788765 566665 4443
No 15
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=99.66 E-value=5.4e-16 Score=119.54 Aligned_cols=83 Identities=19% Similarity=0.206 Sum_probs=73.7
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCCceEeee-C-CCCCeeEEEeec--eecccceeEEEEEecCCCCCCCCCeeecCCCC
Q psy13700 27 WPKRLKEEYVALIEYVKNNKAADNDWFRLES-N-KEGTKWFGSCWF--FYNQLKYEFQIEFDIPITFPTTAPELALPELD 102 (166)
Q Consensus 27 w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep-n-~dgTrW~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPei~fpeld 102 (166)
-.+||.+||+.|.+ +..+.|++.+ + +|..+|.+.+-| .++|++..|.++|.+|.+||..||.|+|-.-.
T Consensus 4 a~~RL~kEl~~l~~-------~~~~gi~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i 76 (164)
T 3h8k_A 4 ALKRLMAEYKQLTL-------NPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEM 76 (164)
T ss_dssp HHHHHHHHHHHHHH-------SCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCC
T ss_pred HHHHHHHHHHHHHh-------CCCCCEEEEECCCCCccEEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEcCCC
Confidence 46899999999876 3456677776 3 489999999998 89999999999999999999999999998888
Q ss_pred CcccccccCceeecC
Q psy13700 103 GKTAKMYRGGKICLS 117 (166)
Q Consensus 103 gkt~kmYrgGkICLd 117 (166)
-|+|+ |.+|+|||+
T Consensus 77 ~HPNV-~~~G~iCl~ 90 (164)
T 3h8k_A 77 FHPNI-YPDGRVCIS 90 (164)
T ss_dssp CCTTB-CTTSBBCCG
T ss_pred ccCCC-CCCCcEeee
Confidence 99998 789999996
No 16
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=99.65 E-value=4.3e-16 Score=118.75 Aligned_cols=91 Identities=18% Similarity=0.270 Sum_probs=78.1
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCceEeee-CC-CCCeeEEEeec--eecccceeEEEEEecCCCCCCCCCeeecCCCCC
Q psy13700 28 PKRLKEEYVALIEYVKNNKAADNDWFRLES-NK-EGTKWFGSCWF--FYNQLKYEFQIEFDIPITFPTTAPELALPELDG 103 (166)
Q Consensus 28 ~~RLkeEY~aLikyv~~nk~~d~dwf~Lep-n~-dgTrW~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPei~fpeldg 103 (166)
..||.+||+.|.+- ....|++.+ ++ +.+.|.+.+-| +++|++-.|.++|.+|.+||..||.|.|-.-.-
T Consensus 3 ~~RL~~El~~l~~~-------~~~~i~~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 75 (149)
T 1fxt_A 3 AKRIMKEIQAVKDD-------PAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVY 75 (149)
T ss_dssp HHHHHHHHHHHHHC-------GGGCCEEEESSSSCSSEEEEEEECCSSSTTCSSEEEEEEECCTTTTSSCCEEEESSCCC
T ss_pred HHHHHHHHHHHHhC-------CCCCEEEEECCCCCceEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCCc
Confidence 47999999998762 234566666 44 89999999998 899999999999999999999999999987779
Q ss_pred cccccccCceeecC---CCCchhhc
Q psy13700 104 KTAKMYRGGKICLS---DHFKPLWA 125 (166)
Q Consensus 104 kt~kmYrgGkICLd---dHf~PlW~ 125 (166)
|+|+...+|+|||+ +.|+|.|+
T Consensus 76 HPni~~~~G~iCl~iL~~~W~p~~~ 100 (149)
T 1fxt_A 76 HPNISSVTGAICLDILKNAWSPVIT 100 (149)
T ss_dssp BTTBCSSSCCBCCHHHHTSCCTTCC
T ss_pred cCCCcCCCCeEeCCcCCCCCCCCCc
Confidence 99997779999998 78988763
No 17
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=99.65 E-value=3e-16 Score=125.15 Aligned_cols=108 Identities=19% Similarity=0.296 Sum_probs=88.7
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCceEeee-CCCCCeeEEEeec--eecccceeEEEEEecCCCCCCCCCeeecCCCCCc
Q psy13700 28 PKRLKEEYVALIEYVKNNKAADNDWFRLES-NKEGTKWFGSCWF--FYNQLKYEFQIEFDIPITFPTTAPELALPELDGK 104 (166)
Q Consensus 28 ~~RLkeEY~aLikyv~~nk~~d~dwf~Lep-n~dgTrW~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPei~fpeldgk 104 (166)
.+||.+||+.|.+ +.......|++++ +++.+.|.+.+-| .++|++..|.++|.+|.+||..||.|+|..-.-|
T Consensus 7 ~~Rl~kEl~~l~~----~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~H 82 (201)
T 3k9o_A 7 VQRIKREFKEVLK----SEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWH 82 (201)
T ss_dssp HHHHHHHHHHHHT----CHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCB
T ss_pred HHHHHHHHHHHHh----CCCCCCCCEEEEECCCCccEEEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCccccccCccc
Confidence 6899999999875 1111246788887 6899999999998 8999999999999999999999999999988899
Q ss_pred ccccccCceeecC---CCCchhhcccCCchhHHHHHhhcccchhhh
Q psy13700 105 TAKMYRGGKICLS---DHFKPLWARNVPKFGIAHAMALGLGPWLAV 147 (166)
Q Consensus 105 t~kmYrgGkICLd---dHf~PlW~~n~p~fgiaha~algl~pwla~ 147 (166)
+|+...+|+|||+ +.|+|. ++|.++| ++|--.|+.
T Consensus 83 Pnv~~~~G~iCl~iL~~~W~p~-------~~i~~vL-~~i~~ll~~ 120 (201)
T 3k9o_A 83 PNISSVTGAICLDILKDQWAAA-------MTLRTVL-LSLQALLAA 120 (201)
T ss_dssp TTBCTTTCBBCCGGGTTTCCTT-------CCHHHHH-HHHHHHHHS
T ss_pred CCCcCCCCeeeCcccccCCCCC-------CCHHHHH-HHHHHHhcC
Confidence 9998899999998 566665 5677776 565555543
No 18
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=99.64 E-value=8.2e-16 Score=120.00 Aligned_cols=100 Identities=19% Similarity=0.195 Sum_probs=83.2
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCCceEeee-CCCCCeeEEEeec--eecccceeEEEEEecCCCCCCCCCeeecCCCCC
Q psy13700 27 WPKRLKEEYVALIEYVKNNKAADNDWFRLES-NKEGTKWFGSCWF--FYNQLKYEFQIEFDIPITFPTTAPELALPELDG 103 (166)
Q Consensus 27 w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep-n~dgTrW~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPei~fpeldg 103 (166)
-..||.+||+.|.+ +....|++.+ +++.+.|.+.+-| .++|++-.|.++|.+|.+||..||.|+|-.-..
T Consensus 5 ~~~RL~kEl~~l~~-------~~~~gi~~~~~~~~l~~w~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 77 (169)
T 1yh2_A 5 RASRLKRELHMLAT-------EPPPGITCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIY 77 (169)
T ss_dssp HHHHHHHHHHHHHH-------SCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCC
T ss_pred HHHHHHHHHHHHHh-------CCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEEeCCCCCCCCcEEEeecCCc
Confidence 46899999999876 2345677767 5899999999998 899999999999999999999999999998889
Q ss_pred cccccccCceeecC-------CCCchhhcccCCchhHHHHHhhccc
Q psy13700 104 KTAKMYRGGKICLS-------DHFKPLWARNVPKFGIAHAMALGLG 142 (166)
Q Consensus 104 kt~kmYrgGkICLd-------dHf~PlW~~n~p~fgiaha~algl~ 142 (166)
|+|+. .+|+|||+ +.|+|.| +|.++| ++|-
T Consensus 78 HPNv~-~~G~iCl~iL~~~~~~~W~p~~-------~i~~vL-~si~ 114 (169)
T 1yh2_A 78 HPNID-SAGRICLDVLKLPPKGAWRPSL-------NIATVL-TSIQ 114 (169)
T ss_dssp BTTBC-TTCBBCCGGGSCTTTSCCCTTS-------CHHHHH-HHHH
T ss_pred cccCC-cCCeEecccccCCcccCCCCCC-------cHHHHH-HHHH
Confidence 99986 89999997 4566654 666665 3443
No 19
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=99.64 E-value=1.1e-15 Score=118.16 Aligned_cols=83 Identities=19% Similarity=0.224 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCCceEeee-C-CCCCeeEEEeec--eecccceeEEEEEecCCCCCCCCCeeecCCCC
Q psy13700 27 WPKRLKEEYVALIEYVKNNKAADNDWFRLES-N-KEGTKWFGSCWF--FYNQLKYEFQIEFDIPITFPTTAPELALPELD 102 (166)
Q Consensus 27 w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep-n-~dgTrW~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPei~fpeld 102 (166)
-..||.+||+.|.+ +....|++.+ + ++...|.+.+-| +++|++-.|.++|.+|.+||..||.|+|-.-.
T Consensus 5 a~~RL~kEl~~l~~-------~~~~gi~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i 77 (165)
T 2ucz_A 5 AQKRLLKELQQLIK-------DSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSI 77 (165)
T ss_dssp HHHHHHHHHHHHHH-------SCCTTEEEEESSSSCCSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCC
T ss_pred HHHHHHHHHHHHHh-------CCCCCEEEEECCCCCccEEEEEEECCCCCCccCcEEEEEEECCccCCCCCCEEEEeCCC
Confidence 36899999999865 3456677776 3 689999999988 89999999999999999999999999998888
Q ss_pred CcccccccCceeecC
Q psy13700 103 GKTAKMYRGGKICLS 117 (166)
Q Consensus 103 gkt~kmYrgGkICLd 117 (166)
.|+|+ |.+|+|||+
T Consensus 78 ~HPNv-~~~G~iCl~ 91 (165)
T 2ucz_A 78 LHPNI-YPNGEVCIS 91 (165)
T ss_dssp SCTTB-CTTSBBCCG
T ss_pred ccCCC-CCCCcEeeh
Confidence 99997 679999997
No 20
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=99.64 E-value=5.6e-16 Score=121.80 Aligned_cols=93 Identities=10% Similarity=0.104 Sum_probs=81.4
Q ss_pred hHHHHHHHHHHHHHHHHHhcccCCCCceEeee-CCCCCeeEEEeec--eecccceeEEEEEecCCCCCCCCCeeecCCCC
Q psy13700 26 LWPKRLKEEYVALIEYVKNNKAADNDWFRLES-NKEGTKWFGSCWF--FYNQLKYEFQIEFDIPITFPTTAPELALPELD 102 (166)
Q Consensus 26 ~w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep-n~dgTrW~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPei~fpeld 102 (166)
....||.+||+.|.+ +....|.+.+ ++|..+|.+.+-| .++|++-.|.++|.+|.+||..||.|+|-.-.
T Consensus 23 ~a~~RL~kEl~~l~~-------~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i 95 (169)
T 1yrv_A 23 RAYLLLHRDFCDLKE-------NNYKGITAKPVSEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFITIP 95 (169)
T ss_dssp HHHHHHHHHHHHHHH-------HCCTTEEEEECSTTSCEEEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEESSCC
T ss_pred HHHHHHHHHHHHHHh-------CCCCCEEEEEcCCccccceeEEECCCCCCccceEEEEEEECCccCCCCCCcceecCCC
Confidence 468999999999875 2234566666 6889999999998 89999999999999999999999999998877
Q ss_pred CcccccccCceeecC-----CCCchhhc
Q psy13700 103 GKTAKMYRGGKICLS-----DHFKPLWA 125 (166)
Q Consensus 103 gkt~kmYrgGkICLd-----dHf~PlW~ 125 (166)
-|+|+.|.+|+|||+ +.|+|.|+
T Consensus 96 ~HPNI~~~~G~ICL~iL~~~~~WsP~~t 123 (169)
T 1yrv_A 96 FHPNVDPHTGQPCIDFLDNPEKWNTNYT 123 (169)
T ss_dssp CCTTBCTTTCCBCCHHHHCGGGCCTTCC
T ss_pred ccCcccCCCCeEeehhhcCCcCCCCcCC
Confidence 999999999999997 57888774
No 21
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=99.64 E-value=6.7e-16 Score=118.02 Aligned_cols=91 Identities=14% Similarity=0.231 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCCceEeee-CCCCCeeEEEeec--eecccceeEEEEEecCCCCCCCCCeeecCCCCC
Q psy13700 27 WPKRLKEEYVALIEYVKNNKAADNDWFRLES-NKEGTKWFGSCWF--FYNQLKYEFQIEFDIPITFPTTAPELALPELDG 103 (166)
Q Consensus 27 w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep-n~dgTrW~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPei~fpeldg 103 (166)
-..||.+||+.|.+ +..+.|.+.+ +++.++|.+.+-| .++|++..|.++|.+|.+||..||.|.|-.---
T Consensus 5 a~~RL~~E~~~l~~-------~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 77 (152)
T 2aak_A 5 ARKRLMRDFKRLQQ-------DPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMF 77 (152)
T ss_dssp HHHHHHHHHHHHHH-------SCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCC
T ss_pred HHHHHHHHHHHHHh-------CCCCCEEEEeCCCCccEEEEEEeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEecCcc
Confidence 46899999999976 3345677777 6789999999988 899999999999999999999999999987778
Q ss_pred cccccccCceeecC---CCCchhhc
Q psy13700 104 KTAKMYRGGKICLS---DHFKPLWA 125 (166)
Q Consensus 104 kt~kmYrgGkICLd---dHf~PlW~ 125 (166)
|+|+. .+|+|||+ +.|+|.|+
T Consensus 78 HPnv~-~~G~iCl~iL~~~W~p~~~ 101 (152)
T 2aak_A 78 HPNIY-ADGSICLDILQNQWSPIYD 101 (152)
T ss_dssp CTTBC-TTSBBCCGGGTTSCCTTCC
T ss_pred cCCCC-CCCEEechhhcCCCCCCCc
Confidence 99985 59999998 67887663
No 22
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=99.63 E-value=1.2e-15 Score=122.66 Aligned_cols=105 Identities=15% Similarity=0.188 Sum_probs=86.5
Q ss_pred hHHHHHHHHHHHHHHHHHhcccCCCCceEeee-CCCCCeeEEEeec--eecccceeEEEEEecCCCCCCCCCeeecCCCC
Q psy13700 26 LWPKRLKEEYVALIEYVKNNKAADNDWFRLES-NKEGTKWFGSCWF--FYNQLKYEFQIEFDIPITFPTTAPELALPELD 102 (166)
Q Consensus 26 ~w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep-n~dgTrW~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPei~fpeld 102 (166)
....||.+||+.|.+ +....|.+.+ +++...|.+.+-| +++|++-.|.|+|.+|..||..||.|.|-.-.
T Consensus 48 ~a~~RL~kEl~~l~~-------~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i 120 (194)
T 3bzh_A 48 TSAKRIQKELADITL-------DPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRI 120 (194)
T ss_dssp HHHHHHHHHHHHHHH-------SCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCC
T ss_pred HHHHHHHHHHHHHHh-------CCCCCceeecccCccccceEEEeCCCCCCccCCEEEEEEECCCcCCCCCccccccCCC
Confidence 378999999999876 2345677777 6899999999988 88999999999999999999999999998888
Q ss_pred CcccccccCceeecC---CCCchhhcccCCchhHHHHHhhcccchhh
Q psy13700 103 GKTAKMYRGGKICLS---DHFKPLWARNVPKFGIAHAMALGLGPWLA 146 (166)
Q Consensus 103 gkt~kmYrgGkICLd---dHf~PlW~~n~p~fgiaha~algl~pwla 146 (166)
.|+|+. .+|+|||+ +.|+|.| +|.++| ++|--.|.
T Consensus 121 ~HPNV~-~~G~ICL~iL~~~WsP~~-------ti~~vL-~sI~~ll~ 158 (194)
T 3bzh_A 121 YHCNIN-SQGVICLDILKDNWSPAL-------TISKVL-LSICSLLT 158 (194)
T ss_dssp CBTTBC-TTCBBCCGGGTTTCCTTC-------CHHHHH-HHHHHHHH
T ss_pred ccceEC-CCCceechhhhccCCCcC-------cHHHHH-HHHHHHHh
Confidence 999985 78999998 5677665 677765 45444443
No 23
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=99.63 E-value=8e-16 Score=120.11 Aligned_cols=93 Identities=19% Similarity=0.231 Sum_probs=79.1
Q ss_pred ChHHHHHHHHHHHHHHHHHhcccCCCCceEeee--CC----CCCeeEEEeec--eecccceeEEEEEecCCCCCCCCCee
Q psy13700 25 DLWPKRLKEEYVALIEYVKNNKAADNDWFRLES--NK----EGTKWFGSCWF--FYNQLKYEFQIEFDIPITFPTTAPEL 96 (166)
Q Consensus 25 ~~w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep--n~----dgTrW~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPei 96 (166)
-+=.+||.+||+.|.+ +....|+..+ ++ +.++|.+.+-| +++|++-.|.++|.+|..||..||.|
T Consensus 9 ~~~~~RL~kEl~~l~~-------~~p~gi~~~p~~~~d~~~nl~~W~~~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v 81 (163)
T 3rcz_B 9 SLCKTRLQEERKQWRR-------DHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKC 81 (163)
T ss_dssp CHHHHHHHHHHHHHHH-------SCCTTCEEEEEECTTSSEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEE
T ss_pred HHHHHHHHHHHHHHHh-------CCCCCEEEEEccCcCCCCCccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCEE
Confidence 4567999999999976 3455666655 32 78999999998 89999999999999999999999999
Q ss_pred ecCCCCCcccccccCceeecC-----CCCchhhc
Q psy13700 97 ALPELDGKTAKMYRGGKICLS-----DHFKPLWA 125 (166)
Q Consensus 97 ~fpeldgkt~kmYrgGkICLd-----dHf~PlW~ 125 (166)
+|-.-.-|+|+ |.+|+|||+ +.|+|.|+
T Consensus 82 ~F~t~i~HPnV-~~~G~iCl~iL~~~~~W~p~~t 114 (163)
T 3rcz_B 82 RFTPPLFHPNV-YPSGTVCLSILNEEEGWKPAIT 114 (163)
T ss_dssp EESSCCCSTTB-CTTSBBCCGGGCTTTTCCTTCC
T ss_pred EEeCCCccCCC-CCCCcEeccccCCCCCcCCcCc
Confidence 99887899999 699999998 24888774
No 24
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=99.63 E-value=1e-15 Score=117.98 Aligned_cols=95 Identities=18% Similarity=0.240 Sum_probs=80.4
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCCceEeee-CCCCCeeEEEeec--eecccceeEEEEEecCCCCCCCCCeeecCCCCC
Q psy13700 27 WPKRLKEEYVALIEYVKNNKAADNDWFRLES-NKEGTKWFGSCWF--FYNQLKYEFQIEFDIPITFPTTAPELALPELDG 103 (166)
Q Consensus 27 w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep-n~dgTrW~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPei~fpeldg 103 (166)
-..||.+||+.|.+--. .....|++.+ +++.++|.+.+-| .++|++-.|.++|.+|..||..||.|.|-.-.-
T Consensus 9 a~~RL~kEl~~l~~~~~----~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 84 (159)
T 2bep_A 9 AVQRIKREFKEVLKSEE----TSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIW 84 (159)
T ss_dssp HHHHHHHHHHHHHHCHH----HHTTSEEEEECSSSSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCC
T ss_pred HHHHHHHHHHHHHhcCC----CCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEeCCCcCCCCCCEEEeeCCCC
Confidence 46899999999976211 1234577777 6789999999988 899999999999999999999999999987778
Q ss_pred cccccccCceeecC---CCCchhhc
Q psy13700 104 KTAKMYRGGKICLS---DHFKPLWA 125 (166)
Q Consensus 104 kt~kmYrgGkICLd---dHf~PlW~ 125 (166)
|+|+...+|+|||+ +.|+|.|+
T Consensus 85 HPni~~~~G~iCl~iL~~~W~p~~~ 109 (159)
T 2bep_A 85 HPNISSVTGAICLDILKDQWAAAMT 109 (159)
T ss_dssp BTTBCTTTCBBCCGGGTTTCCTTCC
T ss_pred ccCCCCCCCEEeChhhhccCCCCCc
Confidence 99998889999998 67888764
No 25
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=99.63 E-value=1.2e-15 Score=118.71 Aligned_cols=98 Identities=15% Similarity=0.131 Sum_probs=82.3
Q ss_pred HHHHHHHHHHHHHHHH----HhcccCC-CCceEeee-CCCCCeeEEEeec--eeccc--ceeEEEEEecCCCCCCCCCee
Q psy13700 27 WPKRLKEEYVALIEYV----KNNKAAD-NDWFRLES-NKEGTKWFGSCWF--FYNQL--KYEFQIEFDIPITFPTTAPEL 96 (166)
Q Consensus 27 w~~RLkeEY~aLikyv----~~nk~~d-~dwf~Lep-n~dgTrW~gkcw~--~~~~~--kyeF~lefdIP~tYP~tpPei 96 (166)
-.+||.+||+.|.+-. +.|.... ...+.+.+ +++..+|.+.+-+ .++|+ +..|.++|.+|.+||..||.|
T Consensus 9 a~kRL~kEl~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpye~~gg~f~~~i~fp~~YP~~pP~v 88 (167)
T 4ds2_A 9 SNKRIIKDLKLLLEEVDANNEANSSGSPHSTAIFSVDTDTIYNWILKVKAPADSVYGGAGNTYQLSVLFSDDYPHEPPTV 88 (167)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTC----CCSSCEEEEEEESSTTEEEEEEECCTTSGGGTTCCEEEEEEECCTTTTTSCCEE
T ss_pred HHHHHHHHHHHHHhCcccccccccccCCCCcEEEEeCCCcccEEEEEEECCCCCCccCCCCEEEEEEECCCCCCCCCCEE
Confidence 4689999999998865 2222222 56777766 6899999999998 88999 999999999999999999999
Q ss_pred ecCCCCCcccccccCceeecC---CCCchhhc
Q psy13700 97 ALPELDGKTAKMYRGGKICLS---DHFKPLWA 125 (166)
Q Consensus 97 ~fpeldgkt~kmYrgGkICLd---dHf~PlW~ 125 (166)
+|..-..|+|+. .+|+|||+ +.|+|.|+
T Consensus 89 ~f~t~i~HPnv~-~~G~iCl~il~~~W~p~~~ 119 (167)
T 4ds2_A 89 RFVTPVYSPLVT-GEGGICDRMVNDFWTPDQH 119 (167)
T ss_dssp EESSCCCCSSCC-TTSCCCTHHHHTTCCTTSC
T ss_pred EEeCCcccccCC-CCCEEEcccCcCCCCCCCC
Confidence 999888999995 89999998 88998875
No 26
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=99.62 E-value=1.1e-15 Score=122.86 Aligned_cols=107 Identities=19% Similarity=0.238 Sum_probs=80.6
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHhcc---cC---CCCceEeee-CCCCCeeEEEeec--eecccceeEEEEEecCCCC
Q psy13700 19 AGPRDKDLWPKRLKEEYVALIEYVKNNK---AA---DNDWFRLES-NKEGTKWFGSCWF--FYNQLKYEFQIEFDIPITF 89 (166)
Q Consensus 19 agprd~~~w~~RLkeEY~aLikyv~~nk---~~---d~dwf~Lep-n~dgTrW~gkcw~--~~~~~kyeF~lefdIP~tY 89 (166)
++++.......||.+||+.|.+-....+ .+ ....|.+.+ +++..+|.+.+-| +++|++-.|.++|.+|.+|
T Consensus 25 ~~~~~~~~a~~RL~kEl~~l~k~~~~~~~~p~~~~~~~~gi~v~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~Y 104 (193)
T 2f4z_A 25 AQPRGTPREQARLLKELADIQQLQRAHDSEPAATHSTSHGVSAQIVGGDIHRWRGFIAGPLGTPYEGGHFTLDIVIPPDY 104 (193)
T ss_dssp -------CHHHHHHHHHHHHHHC----------------CEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTT
T ss_pred cCCCCCCHHHHHHHHHHHHHHhCCCccccccccccCCCCcEEEEEcCCCcceEEEEEeCCCCCCcCCCEEEEEEECCCcC
Confidence 5556556688999999999976221000 00 024577766 6789999999998 8999999999999999999
Q ss_pred CCCCCeeecCCCCCcccccccCceeecC---CCCchhhc
Q psy13700 90 PTTAPELALPELDGKTAKMYRGGKICLS---DHFKPLWA 125 (166)
Q Consensus 90 P~tpPei~fpeldgkt~kmYrgGkICLd---dHf~PlW~ 125 (166)
|..||.|.|-.-.-|+|+...+|+|||+ +.|+|.|+
T Consensus 105 P~~PP~V~F~T~i~HPNI~~~~G~ICL~iL~~~WsP~~t 143 (193)
T 2f4z_A 105 PYNPPKMKFVTKIWHPNISSQTGAICLDILKHEWSPALT 143 (193)
T ss_dssp TTSCCEEEESSCCCBTTBCTTTCBBCCGGGTTTCCTTSC
T ss_pred CCCCCeEEEecCCccCCCcCCCCEEECccccccCCCCCC
Confidence 9999999998877899998889999998 67888764
No 27
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=99.61 E-value=3.6e-15 Score=117.10 Aligned_cols=85 Identities=13% Similarity=0.121 Sum_probs=74.8
Q ss_pred ChHHHHHHHHHHHHHHHHHhcccCCCCceEeee-C-CCCCeeEEEeec--eecccceeEEEEEecCCCCCCCCCeeecCC
Q psy13700 25 DLWPKRLKEEYVALIEYVKNNKAADNDWFRLES-N-KEGTKWFGSCWF--FYNQLKYEFQIEFDIPITFPTTAPELALPE 100 (166)
Q Consensus 25 ~~w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep-n-~dgTrW~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPei~fpe 100 (166)
..+..||.+||+.|.+ +....|++.+ + ++...|.+.+-| .++|++-.|.++|.+|.+||..||.|+|-.
T Consensus 16 ~~~~~rL~kEl~~l~~-------~~~~gi~~~p~~~~nl~~W~~~I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T 88 (172)
T 2awf_A 16 PRGSLLLRRQLAELNK-------NPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFIT 88 (172)
T ss_dssp CTTHHHHHHHHHHHHH-------SCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECS
T ss_pred HHHHHHHHHHHHHHHh-------CCCCCEEEEECCCccccccEEEEeCCCCCCcCCcEEEEEEECCcccCCCCCcccccC
Confidence 4589999999999865 3456677776 4 699999999988 899999999999999999999999999987
Q ss_pred CCCcccccccCceeecC
Q psy13700 101 LDGKTAKMYRGGKICLS 117 (166)
Q Consensus 101 ldgkt~kmYrgGkICLd 117 (166)
-..|+|+ |.+|+|||+
T Consensus 89 ~i~HPNV-~~~G~ICls 104 (172)
T 2awf_A 89 EIWHPNV-DKNGDVCIS 104 (172)
T ss_dssp CCCCTTB-CTTCBBCCG
T ss_pred CCccCCC-CCCCcEehh
Confidence 7789998 578999997
No 28
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=99.61 E-value=2.1e-15 Score=123.19 Aligned_cols=94 Identities=16% Similarity=0.191 Sum_probs=82.5
Q ss_pred ChHHHHHHHHHHHHHHHHHhcccCCCCceEeee-CCCCCeeEEEeec--eecccceeEEEEEecCCCCCCCCCeeecCCC
Q psy13700 25 DLWPKRLKEEYVALIEYVKNNKAADNDWFRLES-NKEGTKWFGSCWF--FYNQLKYEFQIEFDIPITFPTTAPELALPEL 101 (166)
Q Consensus 25 ~~w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep-n~dgTrW~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPei~fpel 101 (166)
..-..||.+||+.|.+ +....|++.+ +++.+.|.+.+-| +++|++-.|.++|.+|.+||..||.|.|-.-
T Consensus 22 s~a~~RL~kEl~~l~~-------~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~ 94 (216)
T 2pwq_A 22 SKELLRLQKELKDIEN-------ENVQEIDAHIKDSNFFEWVGFIKGPEGTPYEGGHFTLAITIPNDYPYNPPKIKFVTK 94 (216)
T ss_dssp CHHHHHHHHHHHHHHH-------SCTTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSC
T ss_pred CHHHHHHHHHHHHHHh-------CCCCCEEEEEcCCccceeEEEEeCCCCCCccceEEEEEEECCCcCCCCCCcccccCC
Confidence 4578999999999875 2335677777 6789999999998 8999999999999999999999999999887
Q ss_pred CCcccccccCceeecC---CCCchhhc
Q psy13700 102 DGKTAKMYRGGKICLS---DHFKPLWA 125 (166)
Q Consensus 102 dgkt~kmYrgGkICLd---dHf~PlW~ 125 (166)
.-|+|+-..+|+|||+ +.|+|.|+
T Consensus 95 i~HPNI~~~~G~ICL~iL~~~WsP~~t 121 (216)
T 2pwq_A 95 IWHPNISSQTGAICLDVLKNEWSPALT 121 (216)
T ss_dssp CCBTTBCTTTCBBCCHHHHHHCCTTCC
T ss_pred CcCCCCcCCCCEEEchhhcccCCCCCc
Confidence 7999998899999998 67888764
No 29
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=99.61 E-value=4.2e-15 Score=117.50 Aligned_cols=84 Identities=20% Similarity=0.254 Sum_probs=73.9
Q ss_pred hHHHHHHHHHHHHHHHHHhcccCCCCceEee-e-CCCCCeeEEEeec--eecccceeEEEEEecCCCCCCCCCeeecCCC
Q psy13700 26 LWPKRLKEEYVALIEYVKNNKAADNDWFRLE-S-NKEGTKWFGSCWF--FYNQLKYEFQIEFDIPITFPTTAPELALPEL 101 (166)
Q Consensus 26 ~w~~RLkeEY~aLikyv~~nk~~d~dwf~Le-p-n~dgTrW~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPei~fpel 101 (166)
.-.+||.+||+.|.+ +..+.|++. + +++..+|.+.+-| .++|++-.|.++|.+|..||..||.|+|-.-
T Consensus 7 ~a~kRL~kEl~~l~~-------~~~~gi~~~~~~~~nl~~W~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 79 (183)
T 3rz3_A 7 SSQKALLLELKGLQE-------EPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTK 79 (183)
T ss_dssp HHHHHHHHHHHHHHH-------SCCTTEEEEECTTCCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSC
T ss_pred HHHHHHHHHHHHHHh-------CCCCCEEEEecCccchhheeeeeeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEecCC
Confidence 457899999999875 335567666 4 5789999999998 8999999999999999999999999999887
Q ss_pred CCcccccccCceeecC
Q psy13700 102 DGKTAKMYRGGKICLS 117 (166)
Q Consensus 102 dgkt~kmYrgGkICLd 117 (166)
.-|+|+ |.+|+|||+
T Consensus 80 i~HPnV-~~~G~iCls 94 (183)
T 3rz3_A 80 MWHPNI-YETGDVCIS 94 (183)
T ss_dssp CCCTTB-CTTSBBCCT
T ss_pred CccCCC-CCCCcEehh
Confidence 899998 789999997
No 30
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=99.61 E-value=3e-15 Score=117.29 Aligned_cols=98 Identities=17% Similarity=0.354 Sum_probs=79.1
Q ss_pred HHHHHHHHHHHHHHHH-Hhccc--CCCCc-eEeee--CCCCCeeEEEeec--eecccceeEEEEEecCCCCCCCCCeeec
Q psy13700 27 WPKRLKEEYVALIEYV-KNNKA--ADNDW-FRLES--NKEGTKWFGSCWF--FYNQLKYEFQIEFDIPITFPTTAPELAL 98 (166)
Q Consensus 27 w~~RLkeEY~aLikyv-~~nk~--~d~dw-f~Lep--n~dgTrW~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPei~f 98 (166)
-..||.+||+.|.+-. ..... .+..| +...+ +++..+|.+.+-| .++|++-.|.++|.+|.+||..||.|.|
T Consensus 7 ~~~RL~kEl~~l~~~~~~~~~~~~p~~g~~~~~~p~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f 86 (172)
T 2y9m_A 7 CMSRIVKEYKVILKTLASDDPIANPYRGIIESLNPIDETDLSKWEAIISGPSDTPYENHQFRILIEVPSSYPMNPPKISF 86 (172)
T ss_dssp HHHHHHHHHHHHHHHHTCCCTTTCTTTTTEEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEE
T ss_pred HHHHHHHHHHHHHhccCCcccccCCCCcceEEEecCCCCchhEEEEEEECCCCCcccCCEEEEEEECCCcCCCCCCEEEE
Confidence 4689999999997632 00000 12234 46656 5789999999998 8999999999999999999999999999
Q ss_pred CC-CCCcccccccCceeecC----CCCchhh
Q psy13700 99 PE-LDGKTAKMYRGGKICLS----DHFKPLW 124 (166)
Q Consensus 99 pe-ldgkt~kmYrgGkICLd----dHf~PlW 124 (166)
-. ..-|+|+.|.+|+|||+ +.|+|.|
T Consensus 87 ~t~~i~HPni~~~~G~iCl~iL~~~~W~p~~ 117 (172)
T 2y9m_A 87 MQNNILHCNVKSATGEICLNILKPEEWTPVW 117 (172)
T ss_dssp CTTSCCCTTEETTTTEECCGGGSTTTCCTTC
T ss_pred eeCCeecCCCcCCCCEEeccccCCCCCCCcC
Confidence 88 77899999999999998 5777765
No 31
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=99.60 E-value=2.2e-15 Score=118.26 Aligned_cols=90 Identities=13% Similarity=0.209 Sum_probs=77.9
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCCceEeee-CCCCCeeEEEeec--eecccceeEEEEEecCCCCCCCCCeeecCCCCC
Q psy13700 27 WPKRLKEEYVALIEYVKNNKAADNDWFRLES-NKEGTKWFGSCWF--FYNQLKYEFQIEFDIPITFPTTAPELALPELDG 103 (166)
Q Consensus 27 w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep-n~dgTrW~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPei~fpeldg 103 (166)
-..||.+||+.|.+ +....|++.+ +++...|.+.+-| .++|++-.|.++|.+|.+||..||.|+|-.-.-
T Consensus 5 a~~RL~kEl~~l~~-------~~~~gi~~~p~~~nl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~ 77 (169)
T 1ayz_A 5 ARRRLMRDFKRMKE-------DAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMF 77 (169)
T ss_dssp HHHHHHHHHHHHHH-------SCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCC
T ss_pred HHHHHHHHHHHHHh-------CCCCCEEEEecCCccccceEEEECCCCCCcCCCEEEEEEECcccCCCCCCccccccCCc
Confidence 36899999999876 2345676766 6789999999988 899999999999999999999999999988889
Q ss_pred cccccccCceeecC---CCCchhh
Q psy13700 104 KTAKMYRGGKICLS---DHFKPLW 124 (166)
Q Consensus 104 kt~kmYrgGkICLd---dHf~PlW 124 (166)
|+|+. .+|+|||+ +.|+|.|
T Consensus 78 HPNI~-~~G~ICl~iL~~~WsP~~ 100 (169)
T 1ayz_A 78 HPNVY-ANGEICLDILQNRWTPTY 100 (169)
T ss_dssp CTTBC-TTSBBCCGGGTTTCCTTC
T ss_pred cCCCC-CCCeEeehhhccCCCCcC
Confidence 99985 69999998 5687765
No 32
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=99.60 E-value=2.1e-15 Score=126.10 Aligned_cols=125 Identities=18% Similarity=0.218 Sum_probs=89.3
Q ss_pred ccccceeccCCCCC------CChHHHHHHHHHHHHHHHHHhcccCCCCceEeee-CCCCCeeEEEeec--eecccceeEE
Q psy13700 10 SSIPLLKTKAGPRD------KDLWPKRLKEEYVALIEYVKNNKAADNDWFRLES-NKEGTKWFGSCWF--FYNQLKYEFQ 80 (166)
Q Consensus 10 ~~ipl~~~~agprd------~~~w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep-n~dgTrW~gkcw~--~~~~~kyeF~ 80 (166)
+..+..++++.|.- ...-.+||.+||+.|.+ ++......|.+.+ +++.+.|.+.+-| .++|++-.|.
T Consensus 35 ~~~~~~~~~~~~~~~s~~~Ms~~a~~RL~kEl~~l~~----~~~~~~~gi~v~p~~dnl~~W~~~I~GP~~TpYegG~f~ 110 (253)
T 3e46_A 35 DLGTDDDDKAMADIGSEFDMANIAVQRIKREFKEVLK----SEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQ 110 (253)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHHH----CHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEE
T ss_pred cccccccccccccccccccccHHHHHHHHHHHHHHHh----CCCCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEE
Confidence 34445555555542 23578999999999876 2111245777877 6899999999998 8999999999
Q ss_pred EEEecCCCCCCCCCeeecCCCCCcccccccCceeecC---CCCchhhcccCCchhHHHHHhhcccchhh
Q psy13700 81 IEFDIPITFPTTAPELALPELDGKTAKMYRGGKICLS---DHFKPLWARNVPKFGIAHAMALGLGPWLA 146 (166)
Q Consensus 81 lefdIP~tYP~tpPei~fpeldgkt~kmYrgGkICLd---dHf~PlW~~n~p~fgiaha~algl~pwla 146 (166)
++|.+|.+||..||.|+|..-.-|+|+...+|+|||+ +.|+|. ++|.++| ++|--.|.
T Consensus 111 l~i~fp~~YP~~PP~V~F~T~i~HPNV~~~~G~ICL~iL~~~WsP~-------~ti~~vL-~sI~~ll~ 171 (253)
T 3e46_A 111 LEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAA-------MTLRTVL-LSLQALLA 171 (253)
T ss_dssp EEEECCTTTTSSCCEEEESSCCCBTTBCTTTCBBCCGGGTTCCCTT-------CCHHHHH-HHHHHHHH
T ss_pred EEEECCCCCCCCCCeeeecCCCccCCccCCCCeeecccccCCCCCC-------CCHHHHH-HHHHHHhc
Confidence 9999999999999999999888999998899999998 667766 4566665 45444443
No 33
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=99.59 E-value=3.1e-15 Score=118.91 Aligned_cols=100 Identities=16% Similarity=0.264 Sum_probs=82.1
Q ss_pred CCChHHHHHHHHHHHHHHHHHhcccCCCCceEeee-CCCCCeeEEEeec--eecccceeEEEEEecCCCCCCCCCeeecC
Q psy13700 23 DKDLWPKRLKEEYVALIEYVKNNKAADNDWFRLES-NKEGTKWFGSCWF--FYNQLKYEFQIEFDIPITFPTTAPELALP 99 (166)
Q Consensus 23 d~~~w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep-n~dgTrW~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPei~fp 99 (166)
.......||.+||+.|.+. ....|++.+ +++...|.+.+-| +++|++-.|.++|.+|.+||..||.|+|-
T Consensus 27 ~~~~~~~RL~kEl~~l~~~-------~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~ 99 (179)
T 1i7k_A 27 ARGPVGKRLQQELMTLMMS-------GDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFL 99 (179)
T ss_dssp ---CHHHHHHHHHHHHHHH-------CCTTEEEEEETTEEEEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEES
T ss_pred cChHHHHHHHHHHHHHHhC-------CCCCEEEEEcCCcccccEEEEECCCCCCcCCCEEEEEEECCCcCCCCCceEEEe
Confidence 3456899999999999762 234566666 5789999999998 89999999999999999999999999998
Q ss_pred CCCCcccccccCceeecC---CCCchhhcccCCchhHHHHH
Q psy13700 100 ELDGKTAKMYRGGKICLS---DHFKPLWARNVPKFGIAHAM 137 (166)
Q Consensus 100 eldgkt~kmYrgGkICLd---dHf~PlW~~n~p~fgiaha~ 137 (166)
.-..|+|+. .+|+|||+ +.|+|.| +|.++|
T Consensus 100 T~i~HPNV~-~~G~ICL~iL~~~WsP~~-------ti~~vL 132 (179)
T 1i7k_A 100 TPCYHPNVD-TQGNISLDILKEKWSALY-------DVRTIL 132 (179)
T ss_dssp SCCCSTTBC-TTCBBCCGGGTTTCCTTC-------CHHHHH
T ss_pred cCCccCccc-cCCeEEcccCcCcCCCCC-------CHHHHH
Confidence 888999985 58999998 5677655 566665
No 34
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=99.58 E-value=3.9e-15 Score=114.72 Aligned_cols=91 Identities=22% Similarity=0.290 Sum_probs=75.9
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCCceEeee--C----CCCCeeEEEeec--eecccceeEEEEEecCCCCCCCCCeeec
Q psy13700 27 WPKRLKEEYVALIEYVKNNKAADNDWFRLES--N----KEGTKWFGSCWF--FYNQLKYEFQIEFDIPITFPTTAPELAL 98 (166)
Q Consensus 27 w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep--n----~dgTrW~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPei~f 98 (166)
-.+||.+||+.|.+ +....|.+.+ + .+..+|.+.+-| .++|++-.|.++|.+|.+||..||.|.|
T Consensus 5 a~~RL~kE~~~l~~-------~~~~g~~~~p~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f 77 (157)
T 2gjd_A 5 CLQRLQEERKKWRK-------DHPFGFYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKF 77 (157)
T ss_dssp HHHHHHHHHHHHHH-------CCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTBEEEEEEECCTTTTTSCCEEEC
T ss_pred HHHHHHHHHHHHHh-------CCCCCEEEEeccccCCCCcccEEEEEEECCCCCCcCCeEEEEEEEcCCCCCCCCCeeec
Confidence 35899999999876 3345565555 2 378999999988 8999999999999999999999999999
Q ss_pred CCCCCcccccccCceeecC---C--CCchhhc
Q psy13700 99 PELDGKTAKMYRGGKICLS---D--HFKPLWA 125 (166)
Q Consensus 99 peldgkt~kmYrgGkICLd---d--Hf~PlW~ 125 (166)
-.---|+|+ |.+|+|||+ . .|+|.|+
T Consensus 78 ~t~i~HPnv-~~~G~iCl~iL~~~~~W~p~~~ 108 (157)
T 2gjd_A 78 PAGFYHPNV-YPSGTICLSILNEDQDWRPAIT 108 (157)
T ss_dssp CTTCCCTTB-CTTSBBCCGGGCTTTTCCTTCC
T ss_pred cCCCccCCC-CCCCcEeeecccCCCCCCCCCc
Confidence 877789998 589999998 3 5877663
No 35
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=99.57 E-value=4.9e-15 Score=118.05 Aligned_cols=116 Identities=16% Similarity=0.293 Sum_probs=83.0
Q ss_pred CCCChHHHHHHHHHHHHHHHHHhcccCCCCceEeee-CCCCCeeEEEeec--eecccceeEEEEEecCCCCCCCCCeeec
Q psy13700 22 RDKDLWPKRLKEEYVALIEYVKNNKAADNDWFRLES-NKEGTKWFGSCWF--FYNQLKYEFQIEFDIPITFPTTAPELAL 98 (166)
Q Consensus 22 rd~~~w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep-n~dgTrW~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPei~f 98 (166)
+-...+..||.+||+.|.+ +....|.+.+ ++|...|.+.+-| .++|++-.|.++|.+|..||..||.|.|
T Consensus 10 ~~~~~a~~RL~kEl~~l~~-------~~~~~i~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~v~f 82 (187)
T 2f4w_A 10 RAPTTATQRLKQDYLRIKK-------DPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYM 82 (187)
T ss_dssp ----CHHHHHHHHHHHHHH-------SCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEE
T ss_pred CCccHHHHHHHHHHHHHHh-------CCCCCEEEEEcCCccceeEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccc
Confidence 3335689999999999976 3356787777 6889999999998 9999999999999999999999999999
Q ss_pred CCCCCcccccccCceeecCCC--CchhhcccCCchhHHHHHhhcccchhhhhhhh
Q psy13700 99 PELDGKTAKMYRGGKICLSDH--FKPLWARNVPKFGIAHAMALGLGPWLAVEIPA 151 (166)
Q Consensus 99 peldgkt~kmYrgGkICLddH--f~PlW~~n~p~fgiaha~algl~pwla~eip~ 151 (166)
-.- |. ..+.+|+|||+.- +..-|+ |.++|.++| ++|--.|+..-|+
T Consensus 83 ~T~--~~-~~~~~G~ICL~iL~~~~~~W~---P~~ti~~vL-~si~sll~~p~p~ 130 (187)
T 2f4w_A 83 ITP--NG-RFKCNTRLCLSITDFHPDTWN---PAWSVSTIL-TGLLSFMVEKGPT 130 (187)
T ss_dssp CSC--CS-SBCTTSCBC----------CC---TTCCHHHHH-HHHHHHHHSCCCC
T ss_pred cCC--Cc-eeccCCeEeeeccccCccCCC---CcCcHHHHH-HHHHHHhcCCCCC
Confidence 754 22 3456899999822 123332 345777776 6666666655554
No 36
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=99.57 E-value=7.2e-15 Score=120.01 Aligned_cols=91 Identities=18% Similarity=0.275 Sum_probs=78.0
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCceEeee-C-CCCCeeEEEeec--eecccceeEEEEEecCCCCCCCCCeeecCCCCC
Q psy13700 28 PKRLKEEYVALIEYVKNNKAADNDWFRLES-N-KEGTKWFGSCWF--FYNQLKYEFQIEFDIPITFPTTAPELALPELDG 103 (166)
Q Consensus 28 ~~RLkeEY~aLikyv~~nk~~d~dwf~Lep-n-~dgTrW~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPei~fpeldg 103 (166)
..||.+||+.|.+ +....|++.+ + .+.+.|.+.+-| .++|++-.|.++|.+|.+||..||.|.|-.-.-
T Consensus 4 ~~RL~kEl~~l~~-------~~~~gi~~~p~~~~~l~~w~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~ 76 (215)
T 1tte_A 4 AKRIMKEIQAVKD-------DPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVY 76 (215)
T ss_dssp HHHHHHHHHHHHT-------TTCTTCEECCCSSSSCCEEEEECCEEEEETTEEECCEEEEECCSCSSSCCCEEEETTTCC
T ss_pred HHHHHHHHHHHHh-------CCCCCEEEEECCCccccccEEEEeCCCCCCcCCCEEEEEEeCCccCCCCCCcccccCCCc
Confidence 4799999999865 2345677777 3 457899999988 899999999999999999999999999988789
Q ss_pred cccccccCceeecC---CCCchhhc
Q psy13700 104 KTAKMYRGGKICLS---DHFKPLWA 125 (166)
Q Consensus 104 kt~kmYrgGkICLd---dHf~PlW~ 125 (166)
|+|+-..+|+|||+ +.|+|.|+
T Consensus 77 HPNI~~~~G~ICL~iL~~~WsP~~t 101 (215)
T 1tte_A 77 HPNISSVTGAICLDILRNAWSPVIT 101 (215)
T ss_dssp CSSSCSSSSCCCSSTTTCCSCTTCC
T ss_pred cCcCcCCCCEEECccCCCCCCCcCc
Confidence 99997669999998 67888763
No 37
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=99.56 E-value=1.1e-14 Score=114.25 Aligned_cols=92 Identities=12% Similarity=0.077 Sum_probs=76.7
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCCc-eEeee-C-CC--CCeeEEEeec--eecccceeEEEEEecCCCCCCCCCeeecC
Q psy13700 27 WPKRLKEEYVALIEYVKNNKAADNDW-FRLES-N-KE--GTKWFGSCWF--FYNQLKYEFQIEFDIPITFPTTAPELALP 99 (166)
Q Consensus 27 w~~RLkeEY~aLikyv~~nk~~d~dw-f~Lep-n-~d--gTrW~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPei~fp 99 (166)
=..||.+||+.|.+ +..+. |++.+ + +| ...|.+.+-| .++|++..|.++|.+|.+||..||.|+|-
T Consensus 26 ~~~RL~kEl~~l~~-------~~~~g~~~~~~~~~~d~~l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~ 98 (160)
T 2a4d_A 26 RNFRLLEELEEGQK-------GVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFV 98 (160)
T ss_dssp HHHHHHHHHHHHHS-------CCTTSSEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEES
T ss_pred HHHHHHHHHHHHHh-------CCCCCcEEEEecCCccccceeeEEEEECCCCCCccCeEEEEEEECCCcCCCCCcEEEEe
Confidence 46799999999864 22333 66655 3 33 8999999998 89999999999999999999999999998
Q ss_pred CCCCcccccccCceeecC-----CCCchhhc
Q psy13700 100 ELDGKTAKMYRGGKICLS-----DHFKPLWA 125 (166)
Q Consensus 100 eldgkt~kmYrgGkICLd-----dHf~PlW~ 125 (166)
.-..|+|+-..+|+|||+ +.|+|.|+
T Consensus 99 T~i~HPNV~~~~G~ICl~iL~~~~~WsP~~t 129 (160)
T 2a4d_A 99 TKINMNGVNSSNGVVDPRAISVLAKWQNSYS 129 (160)
T ss_dssp BCCCCTTBCTTTCBBCGGGSHHHHTCCTTCC
T ss_pred cCceeCCEECCCCEEehhhcCCccCCCccCc
Confidence 878999998789999976 67888763
No 38
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=99.56 E-value=8.7e-15 Score=113.34 Aligned_cols=92 Identities=16% Similarity=0.105 Sum_probs=77.3
Q ss_pred ChHHHHHHHHHHHHHHHHHhcccCCCCceEeee--CCCCCeeEEEeec--eecccceeEEEEEecCCCCCCCCCeeecCC
Q psy13700 25 DLWPKRLKEEYVALIEYVKNNKAADNDWFRLES--NKEGTKWFGSCWF--FYNQLKYEFQIEFDIPITFPTTAPELALPE 100 (166)
Q Consensus 25 ~~w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep--n~dgTrW~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPei~fpe 100 (166)
..=..||.+||+.|.+ +..+.|++.+ +++...|.+.+ + .++|++-.|.++|.+|.+||..||.|+|-.
T Consensus 13 s~~~~RL~kEl~~l~~-------~~~~gi~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t 84 (167)
T 3fn1_B 13 SVRDKLLVKEVAELEA-------NLPCTCKVHFPDPNKLHCFQLTV-TPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLT 84 (167)
T ss_dssp CHHHHHHHHHHHHHGG-------GSCTTEEEECSSSSCTTEEEEEE-CCSSSTTTTCCEEEEEECCTTBTTBCCEEEECS
T ss_pred hHHHHHHHHHHHHHHh-------CCCCCEEEEeCCCCcceeEEEEE-CCCCCccCCCEEEEEEECCCCCCCCCCeeEecC
Confidence 3457899999999865 3345676664 57899999999 6 889999999999999999999999999988
Q ss_pred CCCcccccccCceeecC---C------CCchhhc
Q psy13700 101 LDGKTAKMYRGGKICLS---D------HFKPLWA 125 (166)
Q Consensus 101 ldgkt~kmYrgGkICLd---d------Hf~PlW~ 125 (166)
-.-|+|+ |.+|+|||+ . .|+|.|+
T Consensus 85 ~i~HPnv-~~~G~iCl~iL~~~~~~~~~W~p~~~ 117 (167)
T 3fn1_B 85 KIWHPNI-TETGEICLSLLREHSIDGTGWAPTRT 117 (167)
T ss_dssp CCCCSSB-CTTCCBCCGGGSBCSSSTTSBCTTCC
T ss_pred CcccCCC-CCCCEEechhhccCCCCCCCCCCcCc
Confidence 7899999 489999998 3 5877654
No 39
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=99.56 E-value=2e-14 Score=110.15 Aligned_cols=95 Identities=17% Similarity=0.267 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCceEe-ee-CCCCCeeEEEeec-eecccceeEEEEEecCCCCCCCCCeeecCCCCCc
Q psy13700 28 PKRLKEEYVALIEYVKNNKAADNDWFRL-ES-NKEGTKWFGSCWF-FYNQLKYEFQIEFDIPITFPTTAPELALPELDGK 104 (166)
Q Consensus 28 ~~RLkeEY~aLikyv~~nk~~d~dwf~L-ep-n~dgTrW~gkcw~-~~~~~kyeF~lefdIP~tYP~tpPei~fpeldgk 104 (166)
..||.+||+.|.+ +....|.+ .+ +++.++|.+.+-- .++|++..|.++|.+|.+||..||.|.|-.-..|
T Consensus 6 ~~RL~kEl~~l~~-------~~~~~i~~~~~~~~~l~~w~~~I~P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 78 (155)
T 1wzv_A 6 SMRVVKELEDLQK-------KPPPYLRNLSSDDANVLVWHALLLPDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIYH 78 (155)
T ss_dssp HHHHHHHHHHHHH-------SCCTTEEEEEECSSCTTEEEEEECCCSTTGGGEEEEEEEECCTTTTSSCCEEEESSCCCB
T ss_pred HHHHHHHHHHHHh-------CCCCCEEEEecCCCchheEEEEEcCCCCCCCCCEEEEEEECCCCCCCCCCcceeeCCCcc
Confidence 5799999999976 33456766 55 6889999998863 8899999999999999999999999999888899
Q ss_pred ccccccCceeecC----CCCchhhcccCCchhHHHHH
Q psy13700 105 TAKMYRGGKICLS----DHFKPLWARNVPKFGIAHAM 137 (166)
Q Consensus 105 t~kmYrgGkICLd----dHf~PlW~~n~p~fgiaha~ 137 (166)
+|+. .+|+|||+ +.|+|.| +|.+.|
T Consensus 79 PnV~-~~G~iCl~iL~~~~W~p~~-------~i~~vl 107 (155)
T 1wzv_A 79 PNVD-ENGQICLPIISSENWKPCT-------KTCQVL 107 (155)
T ss_dssp TTBC-TTCBCCCGGGCTTTCCTTC-------CHHHHH
T ss_pred CcCC-CCCeEeecCCCccCCCCCC-------cHHHHH
Confidence 9985 59999997 4576665 566654
No 40
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=99.55 E-value=1.2e-14 Score=109.95 Aligned_cols=93 Identities=15% Similarity=0.145 Sum_probs=76.9
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCCceEeee-C-C--CCCeeEEEeec--eecccceeEEEEEecCCCCCCCCCeeecCC
Q psy13700 27 WPKRLKEEYVALIEYVKNNKAADNDWFRLES-N-K--EGTKWFGSCWF--FYNQLKYEFQIEFDIPITFPTTAPELALPE 100 (166)
Q Consensus 27 w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep-n-~--dgTrW~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPei~fpe 100 (166)
-..||.+||+.|.+- .....|++.+ + + +.++|.+.+-| .++|++..|.++|.+|.+||..||.|+|-.
T Consensus 7 ~~~RL~kEl~~l~~~------~~~~~~~~~~~~~~d~nl~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t 80 (138)
T 1jat_B 7 RNFRLLEELEKGEKG------FGPESCSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFIS 80 (138)
T ss_dssp HHHHHHHHHHHHHC----------CCEEEEESSTTCTTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEESB
T ss_pred HHHHHHHHHHHHHhc------CCCCCEEEEeCCCCCCcceEEEEEEECCCCCCccceEEEEEEECCCCCCCCCCceEEEc
Confidence 357999999998652 1235566655 2 3 38999999998 899999999999999999999999999988
Q ss_pred CCCcccccccCcee--ecC--CCCchhhc
Q psy13700 101 LDGKTAKMYRGGKI--CLS--DHFKPLWA 125 (166)
Q Consensus 101 ldgkt~kmYrgGkI--CLd--dHf~PlW~ 125 (166)
-..|+|+...||+| ||+ ..|+|.|+
T Consensus 81 ~i~HPnv~~~~G~i~~cL~~l~~W~p~~~ 109 (138)
T 1jat_B 81 KINLPCVNPTTGEVQTDFHTLRDWKRAYT 109 (138)
T ss_dssp CCCCTTBCTTTCBBCTTSHHHHTCCTTCC
T ss_pred ccccCCEeCCCCEEeeecccCCCCCCcCc
Confidence 78999998889999 998 68888764
No 41
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=99.54 E-value=1.9e-14 Score=111.66 Aligned_cols=90 Identities=14% Similarity=0.180 Sum_probs=76.8
Q ss_pred ChHHHHHHHHHHHHHHHHHhcccCCCCceEee-e-CCCCCeeEEEeec--eecccceeEEEEEecCCCCCCCCCeeecCC
Q psy13700 25 DLWPKRLKEEYVALIEYVKNNKAADNDWFRLE-S-NKEGTKWFGSCWF--FYNQLKYEFQIEFDIPITFPTTAPELALPE 100 (166)
Q Consensus 25 ~~w~~RLkeEY~aLikyv~~nk~~d~dwf~Le-p-n~dgTrW~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPei~fpe 100 (166)
.....||.+||+.| + ..+.|++. + ++|.++|.+.+ + .++|++-.|.++|.+|.+||..||.|.|-.
T Consensus 5 ~~~~~RL~kEl~~l------~---~~~~~~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t 74 (160)
T 1y8x_A 5 SAAQLRIQKDINEL------N---LPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCET 74 (160)
T ss_dssp CHHHHHHHHHHHTC------C---CCTTEEEECSSTTCTTEEEEEE-CCSSSTTTTBCEEEEEECCTTTTTSCCEEEECS
T ss_pred cHHHHHHHHHHHhc------C---CCCCeEEEeccCCccceEEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEec
Confidence 34789999999998 1 13457666 5 68999999998 7 899999999999999999999999999988
Q ss_pred CCCcccccccCceeecC---CCCchhhc
Q psy13700 101 LDGKTAKMYRGGKICLS---DHFKPLWA 125 (166)
Q Consensus 101 ldgkt~kmYrgGkICLd---dHf~PlW~ 125 (166)
-..|+|+. .+|+|||+ +.|+|.|+
T Consensus 75 ~i~HPnv~-~~G~iCl~iL~~~W~p~~~ 101 (160)
T 1y8x_A 75 MVYHPNID-LEGNVCLNILREDWKPVLT 101 (160)
T ss_dssp CCCBTTBC-TTCBBCCGGGTTTCCTTCC
T ss_pred CCccCcCC-CCCeEEcccchhhccCCCC
Confidence 78999985 57999998 78888764
No 42
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=99.54 E-value=3.8e-15 Score=118.77 Aligned_cols=96 Identities=14% Similarity=0.180 Sum_probs=78.0
Q ss_pred hHHHHHHHHHHHHHHHHHhcccCCCCceEeee-CCCCCeeEEEeec---eecccc-----------eeEEEEEecCCCCC
Q psy13700 26 LWPKRLKEEYVALIEYVKNNKAADNDWFRLES-NKEGTKWFGSCWF---FYNQLK-----------YEFQIEFDIPITFP 90 (166)
Q Consensus 26 ~w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep-n~dgTrW~gkcw~---~~~~~k-----------yeF~lefdIP~tYP 90 (166)
.-..||.+||+.|.+ +...+..+|++.+ +++..+|.+.+.+ .++|.+ -.|.|+|.+|.+||
T Consensus 27 ~a~~RL~kEl~~l~~----~~~~~~~~~~~~p~~dnl~~W~~~I~Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~fp~~YP 102 (186)
T 1zuo_A 27 QASDRLMKELRDIYR----SQSYKTGIYSVELINDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFP 102 (186)
T ss_dssp HHHHHHHHHHHHHHT----SHHHHTTSEEEEEETTEEEEEEEEECCCCTTSHHHHHHHHHHHHHSCCSEEEEEECCTTTT
T ss_pred HHHHHHHHHHHHHHh----CCCCCCCcEEEEEcCCccceeEEEEECCCCCCCccccchhhccccCceEEEEEEECCCCCC
Confidence 467999999999865 1111247888877 6899999999997 589988 78999999999999
Q ss_pred CCCCeeecCCCCCcccccccCceeecC----CCCchhhc
Q psy13700 91 TTAPELALPELDGKTAKMYRGGKICLS----DHFKPLWA 125 (166)
Q Consensus 91 ~tpPei~fpeldgkt~kmYrgGkICLd----dHf~PlW~ 125 (166)
..||.|+|-.-.-|+|-.|.+|+|||+ +.|+|.|+
T Consensus 103 ~~PP~V~f~tpi~hPnnV~~~G~ICL~iL~~~~WsP~~t 141 (186)
T 1zuo_A 103 FDPPFVRVVLPVLSGGYVLGGGALCMELLTKQGWSSAYS 141 (186)
T ss_dssp SSCCEEEEEESCEESTTBCGGGBBCCGGGSTTTCCTTSC
T ss_pred CCCCeEEEeCCccCCCccCCCCcEEeccCCCCCCCCcCc
Confidence 999999997666788544689999998 46887664
No 43
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=99.54 E-value=1.5e-14 Score=111.91 Aligned_cols=91 Identities=15% Similarity=0.107 Sum_probs=76.0
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCCceEeee------CCCCCeeEEEeec--eecccceeEEEEEecCCCCCCCCCeeec
Q psy13700 27 WPKRLKEEYVALIEYVKNNKAADNDWFRLES------NKEGTKWFGSCWF--FYNQLKYEFQIEFDIPITFPTTAPELAL 98 (166)
Q Consensus 27 w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep------n~dgTrW~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPei~f 98 (166)
-.+||.+||+.|.+ +..+.|.+.+ +++..+|.+.+-| +++|++-.|.++|.+|..||..||.|.|
T Consensus 8 a~~RL~kE~~~l~~-------~~~~g~~~~p~~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f 80 (161)
T 2grr_A 8 ALSRLAQERKAWRK-------DHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKF 80 (161)
T ss_dssp HHHHHHHHHHHHHH-------SCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEE
T ss_pred HHHHHHHHHHHHHh-------CCCCCEEEEeccccCCCCCccEEEEEEECCCCCCccCCEEEEEEEcCcccCCCCCEEEE
Confidence 46899999999875 2345665554 2578999999988 8899999999999999999999999999
Q ss_pred CCCCCcccccccCceeecC---C--CCchhhc
Q psy13700 99 PELDGKTAKMYRGGKICLS---D--HFKPLWA 125 (166)
Q Consensus 99 peldgkt~kmYrgGkICLd---d--Hf~PlW~ 125 (166)
-.---|+|+. .+|+|||+ . .|+|.|+
T Consensus 81 ~t~i~HPnv~-~~G~iCl~iL~~~~~W~p~~~ 111 (161)
T 2grr_A 81 EPPLFHPNVY-PSGTVCLSILEEDKDWRPAIT 111 (161)
T ss_dssp SSCCCSTTBC-TTSBBCCGGGCTTTTCCTTCC
T ss_pred ecCcccCCCC-CCCeEeehhcCCCCCcCCCCc
Confidence 8777899986 89999998 2 5877663
No 44
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=99.54 E-value=4.7e-15 Score=114.19 Aligned_cols=86 Identities=16% Similarity=0.227 Sum_probs=75.1
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCceEeee-CCCCCeeEEEeec--eecccceeEEEEEecCCCCCCCCCeeecCCCCCcc
Q psy13700 29 KRLKEEYVALIEYVKNNKAADNDWFRLES-NKEGTKWFGSCWF--FYNQLKYEFQIEFDIPITFPTTAPELALPELDGKT 105 (166)
Q Consensus 29 ~RLkeEY~aLikyv~~nk~~d~dwf~Lep-n~dgTrW~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPei~fpeldgkt 105 (166)
.||.+||+.|.+ + -+.+.+ +++...|.+.+-| .++|++-.|.++|.+|..||..||.|+|-.-.-|+
T Consensus 5 ~Rl~kEl~~l~~---~-------~~~v~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HP 74 (152)
T 2onu_A 5 TRKQCDFTKLIM---A-------GYDLELNNGSTQDFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMNKLLHP 74 (152)
T ss_dssp CHHHHTHHHHHH---H-------TCCEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCT
T ss_pred HHHHHHHHhcCc---C-------CCEEEEccCccceEEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEecCCccC
Confidence 699999999875 1 244555 6789999999987 89999999999999999999999999998877999
Q ss_pred cccccCceeecC---CCCchhh
Q psy13700 106 AKMYRGGKICLS---DHFKPLW 124 (166)
Q Consensus 106 ~kmYrgGkICLd---dHf~PlW 124 (166)
|+...+|+|||+ +.|+|.|
T Consensus 75 ni~~~~G~iCl~il~~~W~p~~ 96 (152)
T 2onu_A 75 NVDEASGSVCLDVINQTWTPLY 96 (152)
T ss_dssp TBCTTTCBBCHHHHHHHCCTTC
T ss_pred cCcCcCCeEecccccccCCCCC
Confidence 998889999998 5788775
No 45
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=99.53 E-value=1e-14 Score=116.27 Aligned_cols=92 Identities=13% Similarity=0.181 Sum_probs=78.0
Q ss_pred hHHHHHHHHHHHHHHHHHhcccCCCCceEeeeCCCCCeeEEEeec--eecccceeEEEEEecCCCCCCCCCeeecCCCCC
Q psy13700 26 LWPKRLKEEYVALIEYVKNNKAADNDWFRLESNKEGTKWFGSCWF--FYNQLKYEFQIEFDIPITFPTTAPELALPELDG 103 (166)
Q Consensus 26 ~w~~RLkeEY~aLikyv~~nk~~d~dwf~Lepn~dgTrW~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPei~fpeldg 103 (166)
....||.+||+.|.+ +-|++.+.+|...|.+.+-| .++|++-.|.++|.+|.+||..||.|+|-.-.-
T Consensus 25 ~a~~RL~kEl~~l~~----------~g~~v~~~ddl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t~i~ 94 (179)
T 2z5d_A 25 PGKRRMDTDVIKLIE----------SKHEVTILGGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIF 94 (179)
T ss_dssp HHHHHHHHHHHHHHH----------SSSCEEEEEETTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCC
T ss_pred HHHHHHHHHHHhcCc----------CCCEEEECCCCceeEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEecCCc
Confidence 478999999999963 22455554578999999988 899999999999999999999999999988779
Q ss_pred cccccccCceeecC---CCCchhhccc
Q psy13700 104 KTAKMYRGGKICLS---DHFKPLWARN 127 (166)
Q Consensus 104 kt~kmYrgGkICLd---dHf~PlW~~n 127 (166)
|+|+.-.+|+|||+ +.|+|.|+-.
T Consensus 95 HPNV~~~~G~ICL~iL~~~WsP~~ti~ 121 (179)
T 2z5d_A 95 HPNIDEASGTVCLDVINQTWTALYDLT 121 (179)
T ss_dssp BTTBCTTTCBBCHHHHHHHCCTTCCTT
T ss_pred cCcCCCCCCeEeccccccCCCCCCCHH
Confidence 99995459999998 7899887543
No 46
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=99.52 E-value=1.7e-14 Score=113.62 Aligned_cols=89 Identities=12% Similarity=0.241 Sum_probs=77.3
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCCceEeeeCCCCCeeEEEeec--eecccceeEEEEEecCCCCCCCCCeeecCCCCCc
Q psy13700 27 WPKRLKEEYVALIEYVKNNKAADNDWFRLESNKEGTKWFGSCWF--FYNQLKYEFQIEFDIPITFPTTAPELALPELDGK 104 (166)
Q Consensus 27 w~~RLkeEY~aLikyv~~nk~~d~dwf~Lepn~dgTrW~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPei~fpeldgk 104 (166)
...||.+||+.|.+ + . +.+.++++...|.+.+-| .++|++-.|.++|.+|..||..||.|+|-.-.-|
T Consensus 13 ~~~RL~~El~~l~~----~---~---~~v~~~~~l~~w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t~i~H 82 (171)
T 1yf9_A 13 SNRRREMDYMRLCN----S---T---RKVYPSDTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRILH 82 (171)
T ss_dssp CCHHHHHHHHHHHS----S---S---SCEEECSSTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCB
T ss_pred HHHHHHHHHHHHHh----C---C---CCCCCCCCceEEEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEeecCccc
Confidence 56999999999875 1 1 224467899999999988 8999999999999999999999999999887789
Q ss_pred ccccccCceeecC---CCCchhhc
Q psy13700 105 TAKMYRGGKICLS---DHFKPLWA 125 (166)
Q Consensus 105 t~kmYrgGkICLd---dHf~PlW~ 125 (166)
+|+...+|+|||+ +.|+|.|+
T Consensus 83 PNi~~~~G~iCl~iL~~~W~p~~~ 106 (171)
T 1yf9_A 83 PNVDERSGSVCLDVINQTWTPMYQ 106 (171)
T ss_dssp TTBCTTTCBBCHHHHHHHCCTTCC
T ss_pred ccCcccCCeEeccccccCCCCCCc
Confidence 9998789999998 68988874
No 47
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=99.51 E-value=2.6e-14 Score=112.80 Aligned_cols=91 Identities=12% Similarity=0.074 Sum_probs=76.4
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCCc-eEeee-C-CC--CCeeEEEeec--eecccceeEEEEEecCCCCCCCCCeeecC
Q psy13700 27 WPKRLKEEYVALIEYVKNNKAADNDW-FRLES-N-KE--GTKWFGSCWF--FYNQLKYEFQIEFDIPITFPTTAPELALP 99 (166)
Q Consensus 27 w~~RLkeEY~aLikyv~~nk~~d~dw-f~Lep-n-~d--gTrW~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPei~fp 99 (166)
-..||.+||+.|.+ +..+. |++.+ + +| .++|.+.+-| .++|++..|.++|.+|.+||..||.|+|-
T Consensus 36 ~~~RL~kEl~~l~~-------~~~~g~~~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~ 108 (170)
T 2hlw_A 36 RNFRLLEELEEGQK-------GVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFV 108 (170)
T ss_dssp HHHHHHHHHHHHHH-------CCGGGCEEEEESSTTCSSCCBEEEEECCCSSSTTSSCCBCEEEECCSSCTTSCCEEEEC
T ss_pred HHHHHHHHHHHHHh-------CCCCCcEEEEecCcccccceeeEEEEeCCCCCCcCCcEEEEEEECCCCCCCCCCeeEEe
Confidence 57899999999875 12233 56654 3 33 8999999998 89999999999999999999999999998
Q ss_pred CCCCcccccccCceeecC-----CCCchhh
Q psy13700 100 ELDGKTAKMYRGGKICLS-----DHFKPLW 124 (166)
Q Consensus 100 eldgkt~kmYrgGkICLd-----dHf~PlW 124 (166)
.-..|+|+-..+|+|||+ +.|+|.|
T Consensus 109 T~i~HPNV~~~~G~ICl~iL~~~~~WsP~~ 138 (170)
T 2hlw_A 109 TKINMNGVNSSNGVVDPRAISVLAKWQNSY 138 (170)
T ss_dssp BCCCCSSBCSSSCBBCTTTCHHHHTCCSSC
T ss_pred cccccCCEeCCCCEEEhhhcCCCCCCCccC
Confidence 878999998899999965 5787766
No 48
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=99.51 E-value=4.3e-14 Score=112.04 Aligned_cols=90 Identities=13% Similarity=0.139 Sum_probs=77.3
Q ss_pred ChHHHHHHHHHHHHHHHHHhcccCCCCceEee-e-CCCCCeeEEEeec--eecccceeEEEEEecCCCCCCCCCeeecCC
Q psy13700 25 DLWPKRLKEEYVALIEYVKNNKAADNDWFRLE-S-NKEGTKWFGSCWF--FYNQLKYEFQIEFDIPITFPTTAPELALPE 100 (166)
Q Consensus 25 ~~w~~RLkeEY~aLikyv~~nk~~d~dwf~Le-p-n~dgTrW~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPei~fpe 100 (166)
.....||.+||+.| + -.+.+++. + ++|...|.+.+ + .++|++-.|.++|.+|.+||..||.|.|-.
T Consensus 25 ~~~~~RL~kEl~~l------~---~~~~i~~~~p~~~nl~~W~~~i-gP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t 94 (180)
T 2nvu_C 25 SAAQLRIQKDINEL------N---LPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCET 94 (180)
T ss_dssp CHHHHHHHHHHHTC------C---CCTTEEEECSSTTCTTEEEEEE-CCCSGGGTTBCEEEEEECCTTTTTSCCEEEECS
T ss_pred cHHHHHHHHHHHhc------C---CCCCeEEEecccccccceEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCcCceec
Confidence 45889999999998 1 13457666 5 68999999998 7 899999999999999999999999999987
Q ss_pred CCCcccccccCceeecC---CCCchhhc
Q psy13700 101 LDGKTAKMYRGGKICLS---DHFKPLWA 125 (166)
Q Consensus 101 ldgkt~kmYrgGkICLd---dHf~PlW~ 125 (166)
-.-|+|+. .+|+|||+ +.|+|.|+
T Consensus 95 ~i~HPNV~-~~G~iCl~iL~~~W~p~~~ 121 (180)
T 2nvu_C 95 MVYHPNID-LEGNVALNILREDWKPVLT 121 (180)
T ss_dssp CCCBTTBC-TTSBBCCGGGTTSCCTTCC
T ss_pred cCccCCCC-CCCcEEcccccccCCCCCC
Confidence 77899985 68999998 78988874
No 49
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=99.51 E-value=2.8e-14 Score=113.90 Aligned_cols=93 Identities=14% Similarity=0.077 Sum_probs=79.0
Q ss_pred ChHHHHHHHHHHHHHHHHHhcccCCCCceEee----e-CCCCC---eeEEEeec-eecccceeEEEEEecCCCCCCCCCe
Q psy13700 25 DLWPKRLKEEYVALIEYVKNNKAADNDWFRLE----S-NKEGT---KWFGSCWF-FYNQLKYEFQIEFDIPITFPTTAPE 95 (166)
Q Consensus 25 ~~w~~RLkeEY~aLikyv~~nk~~d~dwf~Le----p-n~dgT---rW~gkcw~-~~~~~kyeF~lefdIP~tYP~tpPe 95 (166)
..=..||.+||+.|. ....+.+. + ++|.. +|.+.+-. .++|++..|.++|.+|.+||..||.
T Consensus 28 s~a~~RL~kEl~~l~---------~~~~i~~~~~~~p~~~nl~~~~~w~~~I~p~~tpyegg~f~~~i~fp~~YP~~PP~ 98 (190)
T 3o2u_A 28 SAARIRLKRDLDSLD---------LPPTVTLNVITSPDSADRSQSPKLEVIVRPDEGYYNYGSINFNLDFNEVYPIEPPK 98 (190)
T ss_dssp CHHHHHHHHHHHTCC---------CCTTEEEEEEECTTCCCTTSCCEEEEEECCSSSTTTTCCEEEEEECCTTTTTSCCE
T ss_pred cHHHHHHHHHHHhcc---------CCCCEEEEecCCCCCccCCcCCeEEEEEcCCCCCCCCCEEEEEEECCCCCCCCCce
Confidence 446899999999984 23566665 5 57888 99999866 7999999999999999999999999
Q ss_pred eecCCCCCcccccccCceeecC---CCCchhhccc
Q psy13700 96 LALPELDGKTAKMYRGGKICLS---DHFKPLWARN 127 (166)
Q Consensus 96 i~fpeldgkt~kmYrgGkICLd---dHf~PlW~~n 127 (166)
|+|..-.-|+|+. .+|+|||+ +.|+|.|+-.
T Consensus 99 v~f~t~i~HPnV~-~~G~iCl~iL~~~W~p~~~i~ 132 (190)
T 3o2u_A 99 VVCLKKIFHPNID-LKGNVCLNILREDWSPALDLQ 132 (190)
T ss_dssp EEECSCCCCTTBC-TTSBBCCGGGTTTCCTTCCHH
T ss_pred eEEecCcccCCCC-CCCeEechhccCCCCCCCCHH
Confidence 9999888999994 79999998 8899887533
No 50
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=99.48 E-value=3.3e-14 Score=108.81 Aligned_cols=89 Identities=21% Similarity=0.347 Sum_probs=73.4
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCceE-eee-CCCCCeeEEEeec-eecccceeEEEEEecCCCCCCCCCeeecCCCCCcc
Q psy13700 29 KRLKEEYVALIEYVKNNKAADNDWFR-LES-NKEGTKWFGSCWF-FYNQLKYEFQIEFDIPITFPTTAPELALPELDGKT 105 (166)
Q Consensus 29 ~RLkeEY~aLikyv~~nk~~d~dwf~-Lep-n~dgTrW~gkcw~-~~~~~kyeF~lefdIP~tYP~tpPei~fpeldgkt 105 (166)
.||.+||+.|.+ +....|+ ..+ +++..+|.+.+-- .++|++-.|.++|.+|.+||..||.|.|-.-..|+
T Consensus 5 ~RL~kEl~~l~~-------~~~~~~~~~~~~~~~l~~w~~~i~P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 77 (154)
T 1c4z_D 5 RRLMKELEEIRK-------CGMKNFRNIQVDEANLLTWQGLIVPDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHP 77 (154)
T ss_dssp TTHHHHHTTCSS-------SCCSSCEEECSSCSSSSEEEEEECCCSSSCCSCCEEEEEECCTTTTTSCCEEEESSCCCCT
T ss_pred HHHHHHHHHHHh-------CCCCCEEEeeCCCCchheEEEEEeCCCCCccCCeEEEEEEeCCCCCCCCCEEEEeCCCccc
Confidence 599999998753 2335565 333 5789999998853 78999999999999999999999999998777999
Q ss_pred cccccCceeecC----CCCchhhc
Q psy13700 106 AKMYRGGKICLS----DHFKPLWA 125 (166)
Q Consensus 106 ~kmYrgGkICLd----dHf~PlW~ 125 (166)
|+. .+|+|||+ ++|+|.|+
T Consensus 78 nv~-~~G~iCl~iL~~~~W~p~~~ 100 (154)
T 1c4z_D 78 NID-EKGQVCLPVISAENWKPATK 100 (154)
T ss_dssp TBC-TTCBBCCTTTSSSSCCTTCC
T ss_pred cCC-CCCEEECCCCCCCCCCCCCc
Confidence 986 68999998 57887764
No 51
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=99.47 E-value=1.5e-13 Score=106.89 Aligned_cols=93 Identities=9% Similarity=0.061 Sum_probs=75.8
Q ss_pred hHHHHHHHHHHHHHHHHHhcccCCCCceEeee-C-C--CCCeeEEEeec--eecccceeEEEEEecCCCCCCCCCeeecC
Q psy13700 26 LWPKRLKEEYVALIEYVKNNKAADNDWFRLES-N-K--EGTKWFGSCWF--FYNQLKYEFQIEFDIPITFPTTAPELALP 99 (166)
Q Consensus 26 ~w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep-n-~--dgTrW~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPei~fp 99 (166)
.-..||.+||+.|.+ + .....|++.+ + + +...|.+.+-| .++|++-.|.++|.+|.+||..||.|+|-
T Consensus 21 ~~~~RL~kEl~~l~~----~--~~~~~i~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~ 94 (156)
T 2q0v_A 21 PRSFRLLDELERGQK----G--NVSEGVSFGLESADDITLSNWSCTIFGQPGTVFENRIYSLTIFCDDNYPDSPPTVKFD 94 (156)
T ss_dssp CHHHHHHHHHHHHHC----C---CCTTEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEES
T ss_pred hHHHHHHHHHHHHHh----C--CCCCCeEEEECCCccccceeeEEEEECCCCCCcCCcEEEEEEECCCcCCCCCCeEEEE
Confidence 346899999999864 1 1345676655 2 3 48999999998 89999999999999999999999999998
Q ss_pred CCCCcccccccCcee---ecC--CCCchhhc
Q psy13700 100 ELDGKTAKMYRGGKI---CLS--DHFKPLWA 125 (166)
Q Consensus 100 eldgkt~kmYrgGkI---CLd--dHf~PlW~ 125 (166)
.-.-|+|+ |.+|+| ||+ ..|+|.|+
T Consensus 95 t~i~HPNV-~~~G~icisCL~iL~~WsP~~t 124 (156)
T 2q0v_A 95 TKIEMSCV-DNCGRVIKNNLHILKNWNRNYT 124 (156)
T ss_dssp BCCCCTTB-CTTSBBCGGGSHHHHTCCTTCC
T ss_pred cccccCCC-ccCCeEehhhcccccCCCCcCc
Confidence 77789998 567999 887 45888763
No 52
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=99.47 E-value=1.3e-13 Score=119.94 Aligned_cols=91 Identities=15% Similarity=0.177 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCceEeee-CCCCCeeEEEeec--eecccceeEEEEEecCCCCCCCCCeeecCCCCCc
Q psy13700 28 PKRLKEEYVALIEYVKNNKAADNDWFRLES-NKEGTKWFGSCWF--FYNQLKYEFQIEFDIPITFPTTAPELALPELDGK 104 (166)
Q Consensus 28 ~~RLkeEY~aLikyv~~nk~~d~dwf~Lep-n~dgTrW~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPei~fpeldgk 104 (166)
.+||.+||+.|.+ +....|++.| +++...|.+.+-| .++|++-.|.+.+.+|..||..||.|+|-.-..|
T Consensus 5 ~~RL~kEl~~l~~-------~~~~~~~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~H 77 (399)
T 4ddg_A 5 LKRIHKELNDLAR-------DPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYH 77 (399)
T ss_dssp HHHHHHHHHHHHH-------SCCSSEEEEEETTEEEEEEEEEECCTTSSSTTCEEEEEEECCSSTTTSCCEEEESSCCCC
T ss_pred HHHHHHHHHHHHh-------CCCCCEEEEEcCCcceEEEEEEECCCCCCCCCCEEEEEEECCcccCCCCcEEEeeccccc
Confidence 5899999999876 3345677777 6899999999998 8999999999999999999999999999888899
Q ss_pred ccccccCceeecC---CCCchhhcc
Q psy13700 105 TAKMYRGGKICLS---DHFKPLWAR 126 (166)
Q Consensus 105 t~kmYrgGkICLd---dHf~PlW~~ 126 (166)
+|+. .+|+|||+ +.|+|.|+-
T Consensus 78 Pnv~-~~G~iCl~il~~~W~p~~~i 101 (399)
T 4ddg_A 78 PNIN-SNGSISLDILRSQWSPALTI 101 (399)
T ss_dssp TTBC-TTCBBCCGGGTTSCCTTCCH
T ss_pred cccC-CCCeEeCcccccCCCccccH
Confidence 9985 79999998 678888753
No 53
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=99.41 E-value=6.8e-13 Score=114.97 Aligned_cols=101 Identities=18% Similarity=0.203 Sum_probs=81.1
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHhcccCC-CCceEeee-CCCCCeeEEEeec--eecccceeEEEEEecCCCCCCCCC
Q psy13700 19 AGPRDKDLWPKRLKEEYVALIEYVKNNKAAD-NDWFRLES-NKEGTKWFGSCWF--FYNQLKYEFQIEFDIPITFPTTAP 94 (166)
Q Consensus 19 agprd~~~w~~RLkeEY~aLikyv~~nk~~d-~dwf~Lep-n~dgTrW~gkcw~--~~~~~kyeF~lefdIP~tYP~tpP 94 (166)
++......+..||.+||+.|.+-. ... ...+.+.+ +++...|.+.+-| .++|++--|.|+|.+|.+||..||
T Consensus 69 ~~~~~s~~~~kRL~kEl~~L~k~~----p~g~~~~i~v~~~ednl~~w~~~I~GP~~TpYegG~F~l~I~fP~dYP~~PP 144 (323)
T 3ceg_A 69 ANDANSAARARRLAQEAVTLSTSL----PLSSSSSVFVRCDEERLDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPP 144 (323)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHC----CCCSSCCEEEEEESSCTTEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCC
T ss_pred cCCCCCHHHHHHHHHHHHHHHhCC----CCCcccceeecccCCCccccEEEEeCCCCCCcCCCEEEEEEeCCCCCCCCCC
Confidence 344555679999999999998732 111 12343444 6789999999988 899999999999999999999999
Q ss_pred eeecCCC-----CCcccccccCceeecC----------CCCchhh
Q psy13700 95 ELALPEL-----DGKTAKMYRGGKICLS----------DHFKPLW 124 (166)
Q Consensus 95 ei~fpel-----dgkt~kmYrgGkICLd----------dHf~PlW 124 (166)
.|.|... --|+|+ |.+|+|||+ +.|+|.+
T Consensus 145 ~V~F~T~~g~~~ifHPNV-~~~G~ICLsiL~~~~g~~~e~WsPa~ 188 (323)
T 3ceg_A 145 LVNLETTGGHSVRFNPNL-YNDGKVCLSILNTWHGRPEEKWNPQT 188 (323)
T ss_dssp EEEECCSTTTTCCCBTTB-CTTCBBCCGGGTSSCCCGGGSCCTTT
T ss_pred eEEEeccCCCcccccCCC-CcCCeEechhhccccCCCcCCCCcCc
Confidence 9999876 458888 589999997 3688887
No 54
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=97.98 E-value=1.6e-05 Score=62.92 Aligned_cols=63 Identities=16% Similarity=0.232 Sum_probs=45.5
Q ss_pred CCCCeeEEEeec---eecccc---eeEEEEEecCCCCCCCCCeeecCC--CC---------CcccccccCceeecC--CC
Q psy13700 59 KEGTKWFGSCWF---FYNQLK---YEFQIEFDIPITFPTTAPELALPE--LD---------GKTAKMYRGGKICLS--DH 119 (166)
Q Consensus 59 ~dgTrW~gkcw~---~~~~~k---yeF~lefdIP~tYP~tpPei~fpe--ld---------gkt~kmYrgGkICLd--dH 119 (166)
+||+.=.=.||. ..+|.+ |.|.|+|-||.+||..||.+-|-. .+ .|.++ ...|+|||+ .+
T Consensus 57 ~dG~~~~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p~t~~m~~~~~~I~~hpnV-D~~G~I~lpyL~~ 135 (162)
T 3r3q_A 57 SDGTPQLLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLENFDMNTISSSLPIQEYI-DSNGWIALPILHA 135 (162)
T ss_dssp TTSCEEEEEEEEEEEECSCCTTSCCEEEEEEECCTTTTTSCCEEEECGGGCCTTTSCTTSTHHHHB-CTTSBBCCGGGGS
T ss_pred CCCChheEEEEECccCccccCcccccccEEEEeCcccCCCCCEEEEECCCccccccccccCCCCCC-CCCCcEeCccccc
Confidence 466543333333 356665 889999999999999999998832 22 26666 468999998 67
Q ss_pred Cch
Q psy13700 120 FKP 122 (166)
Q Consensus 120 f~P 122 (166)
|+|
T Consensus 136 W~p 138 (162)
T 3r3q_A 136 WDP 138 (162)
T ss_dssp CCG
T ss_pred CCC
Confidence 886
No 55
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=97.37 E-value=0.00025 Score=55.28 Aligned_cols=93 Identities=20% Similarity=0.197 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCCceEeeeCCCCCeeEEEeeceecccceeEEEEEecCCCCCCCCCeeecCC-C----
Q psy13700 27 WPKRLKEEYVALIEYVKNNKAADNDWFRLESNKEGTKWFGSCWFFYNQLKYEFQIEFDIPITFPTTAPELALPE-L---- 101 (166)
Q Consensus 27 w~~RLkeEY~aLikyv~~nk~~d~dwf~Lepn~dgTrW~gkcw~~~~~~kyeF~lefdIP~tYP~tpPei~fpe-l---- 101 (166)
+..+.++|-.++++.-.+-+-. .|-|+ .+..++-.|.|.+=-.+.-..|.+-|.|-||.+||..||-+-+-+ .
T Consensus 21 ~~d~t~~dv~~vl~~yp~L~p~-~~~y~-G~~~~LL~l~GtIpv~y~g~~y~iPi~Iwlp~~YP~~pP~vfv~pt~~m~I 98 (146)
T 3obq_A 21 YRDLTVRETVNVITLYKDLKPV-LDSYG-TGSRELMNLTGTIPVPYRGNTYNIPICLWLLDTYPYNPPICFVKPTSSMTI 98 (146)
T ss_dssp SHHHHHHHHHHHHHHCTTEEEE-EEESS-STTCEEEEEEEEEEEECSSCEEEEEEEEECCTTTTTSCCEEEECCCTTEEE
T ss_pred CcchhHHHHHHHHHhCCCCceE-eeeee-CChheEEEEEEEeeeeecCccccceEEEEeCccCCCCCCEEEEeCCCCCEE
Confidence 3445555555554433222111 11122 335677789988865555667888899999999999999995532 1
Q ss_pred CCcccccccCceeecC--CCCch
Q psy13700 102 DGKTAKMYRGGKICLS--DHFKP 122 (166)
Q Consensus 102 dgkt~kmYrgGkICLd--dHf~P 122 (166)
..|.++. ..|+|||. .+|++
T Consensus 99 ~~~~~Vd-~~G~i~lpyL~~W~~ 120 (146)
T 3obq_A 99 KTGKHVD-ANGKIYLPYLHEWKH 120 (146)
T ss_dssp CCBTTBC-TTCBBCCHHHHTCCT
T ss_pred CCCCCCC-CCCCEecccccccCC
Confidence 1345554 58999998 66877
No 56
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=95.31 E-value=0.06 Score=39.04 Aligned_cols=68 Identities=21% Similarity=0.346 Sum_probs=40.7
Q ss_pred ChHHHHHHHHHHHHHHHHHhcccCCCCceEeeeCCCCCeeEEEeec--eec-----c-cceeEEEEEecCCCCCCCCCee
Q psy13700 25 DLWPKRLKEEYVALIEYVKNNKAADNDWFRLESNKEGTKWFGSCWF--FYN-----Q-LKYEFQIEFDIPITFPTTAPEL 96 (166)
Q Consensus 25 ~~w~~RLkeEY~aLikyv~~nk~~d~dwf~Lepn~dgTrW~gkcw~--~~~-----~-~kyeF~lefdIP~tYP~tpPei 96 (166)
..-.++..+|..+|..--. + ++..+.++..+..|...+.. +.+ - ....+.|.|..|.+||.+||.|
T Consensus 9 ~~~~e~q~~EleaL~SIY~-d-----~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i 82 (137)
T 1ukx_A 9 ESYSQRQDHELQALEAIYG-S-----DFQDLRPDARGRVREPPEINLVLYPQGLAGEEVYVQVELRVKCPPTYPDVVPEI 82 (137)
T ss_dssp CCHHHHHHHHHHHHHHHTS-S-----SEEECCCCCSSSCCCCCCEEEEECCTTSCSSSCSCEEEEEECCCTTTTSSCCCC
T ss_pred cchHHHHHHHHHHHHHHCc-c-----cceeccCcccCccCCCcEEEEEEecCCcCCcccceEEEEEEECCCCCCCCCCcE
Confidence 4577889999999876441 1 33233332222222222211 111 0 1246899999999999999999
Q ss_pred ec
Q psy13700 97 AL 98 (166)
Q Consensus 97 ~f 98 (166)
.+
T Consensus 83 ~l 84 (137)
T 1ukx_A 83 DL 84 (137)
T ss_dssp EE
T ss_pred EE
Confidence 87
No 57
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.03 E-value=0.033 Score=40.09 Aligned_cols=23 Identities=17% Similarity=0.368 Sum_probs=20.6
Q ss_pred eeEEEEEecCCCCCCCCCeeecC
Q psy13700 77 YEFQIEFDIPITFPTTAPELALP 99 (166)
Q Consensus 77 yeF~lefdIP~tYP~tpPei~fp 99 (166)
..+.|.|..|.+||.+||.|.+-
T Consensus 55 ~~~~L~v~~p~~YP~~~P~i~l~ 77 (128)
T 2ebm_A 55 VQTTLKFTYSEKYPDEAPLYEIF 77 (128)
T ss_dssp CBEEEEEECCSSTTTSCCEEEEE
T ss_pred eeEEEEEEeCCCCCCCCceEEEE
Confidence 47899999999999999999873
No 58
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=93.23 E-value=0.057 Score=39.42 Aligned_cols=24 Identities=25% Similarity=0.569 Sum_probs=21.5
Q ss_pred ceeEEEEEecCCCCCCCCCeeecC
Q psy13700 76 KYEFQIEFDIPITFPTTAPELALP 99 (166)
Q Consensus 76 kyeF~lefdIP~tYP~tpPei~fp 99 (166)
...+.|.|..|.+||.+||.|.+-
T Consensus 61 ~~~~~L~~~~p~~YP~~~P~i~l~ 84 (138)
T 2yz0_A 61 ESSITLHFAMTPMYPYTAPEIEFK 84 (138)
T ss_dssp CCEEEEEEECCSSTTSSCCEEEEE
T ss_pred ceEEEEEEECCCCCCCCCCeEEEe
Confidence 458899999999999999999884
No 59
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.05 E-value=0.054 Score=39.18 Aligned_cols=23 Identities=17% Similarity=0.723 Sum_probs=20.7
Q ss_pred eeEEEEEecCCCCCCCCCeeecC
Q psy13700 77 YEFQIEFDIPITFPTTAPELALP 99 (166)
Q Consensus 77 yeF~lefdIP~tYP~tpPei~fp 99 (166)
..+.|.|..|.+||.+||.|.+-
T Consensus 56 ~~~~L~~~~p~~YP~~~P~i~l~ 78 (128)
T 2ebk_A 56 IPLELVFHLPVNYPSCLPGISIN 78 (128)
T ss_dssp CEEEEEEEECSSTTSSCCCCCCC
T ss_pred eEEEEEEECCCCCCCCCCeEEEE
Confidence 47999999999999999999765
No 60
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=92.99 E-value=0.063 Score=38.62 Aligned_cols=23 Identities=17% Similarity=0.638 Sum_probs=20.7
Q ss_pred eeEEEEEecCCCCCCCCCeeecC
Q psy13700 77 YEFQIEFDIPITFPTTAPELALP 99 (166)
Q Consensus 77 yeF~lefdIP~tYP~tpPei~fp 99 (166)
..+.|.|..|.+||.++|.|.+-
T Consensus 59 ~~~~L~~~~p~~YP~~~P~i~~~ 81 (128)
T 2day_A 59 VCFTLVLQVPAEYPHEVPQISIR 81 (128)
T ss_dssp CEEEEEEEECSSTTSSCCEEEEE
T ss_pred eeEEEEEEcCCCCCCCCCCeEEE
Confidence 57899999999999999999874
No 61
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=92.80 E-value=0.058 Score=40.39 Aligned_cols=24 Identities=21% Similarity=0.563 Sum_probs=20.9
Q ss_pred eeEEEEEecCCCCCCCCCeeecCC
Q psy13700 77 YEFQIEFDIPITFPTTAPELALPE 100 (166)
Q Consensus 77 yeF~lefdIP~tYP~tpPei~fpe 100 (166)
-.+.|.|.+|.+||.+||.|.+-.
T Consensus 73 ~~l~L~v~lP~~YP~~~P~i~l~~ 96 (152)
T 2dax_A 73 AMFSLACILPFKYPAVLPEITVRS 96 (152)
T ss_dssp EEEEEEEEECSSTTSSCCCCEEEC
T ss_pred ceEEEEEECCCCCCCCCCeEEEEc
Confidence 468999999999999999998753
No 62
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=91.20 E-value=0.13 Score=39.02 Aligned_cols=22 Identities=18% Similarity=0.377 Sum_probs=20.1
Q ss_pred eEEEEEecCCCCCCCCCeeecC
Q psy13700 78 EFQIEFDIPITFPTTAPELALP 99 (166)
Q Consensus 78 eF~lefdIP~tYP~tpPei~fp 99 (166)
.+.|+|..|.+||.+||.|.+-
T Consensus 76 ~i~L~v~lP~~YP~~~P~i~l~ 97 (154)
T 2daw_A 76 KIDLQVTMPHSYPYLALQLFGR 97 (154)
T ss_dssp EEEEEEEECSSTTSSCCEEEEE
T ss_pred eEEEEEEcCCCCCCCCCcEEEE
Confidence 7999999999999999999764
No 63
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=59.59 E-value=13 Score=29.90 Aligned_cols=44 Identities=14% Similarity=0.198 Sum_probs=30.8
Q ss_pred CceEeee-CCCCCeeEEEeeceecccceeEEEEEecCCCCCCCCCeee
Q psy13700 51 DWFRLES-NKEGTKWFGSCWFFYNQLKYEFQIEFDIPITFPTTAPELA 97 (166)
Q Consensus 51 dwf~Lep-n~dgTrW~gkcw~~~~~~kyeF~lefdIP~tYP~tpPei~ 97 (166)
.|=+|.. +++.+.=+=++ ..-.+=++.|++.++..||..||.+.
T Consensus 14 GW~~l~~id~~~~~i~l~~---~D~~gR~H~l~v~l~~~yp~~~P~~~ 58 (186)
T 3zqs_A 14 GWDKLVYADTCFSTIKLKA---EDASGREHLITLKLKAKYPAESPDYF 58 (186)
T ss_dssp CGGGEEEECTTSSEEEEEE---ECTTSCEEEEEEECCTTTTTSCCEEE
T ss_pred CCceeeeecCCccEEEEEE---EeCCCCeEEEEEEECCCCCCCCCeeE
Confidence 5555555 56666555444 23344678899999999999999885
No 64
>3t98_B Nucleoporin NUP58/NUP45; NUP62 complex, nuclear import, coiled-coil, HE hairpin, FG-repeat, NPC, nuclear tranport, TRA channel, karyopherin; 2.50A {Rattus norvegicus} PDB: 2osz_A
Probab=35.04 E-value=24 Score=25.43 Aligned_cols=17 Identities=29% Similarity=0.307 Sum_probs=14.8
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy13700 27 WPKRLKEEYVALIEYVK 43 (166)
Q Consensus 27 w~~RLkeEY~aLikyv~ 43 (166)
=++++||+|..+++|+-
T Consensus 73 ~V~~~Ke~Yl~~rr~~~ 89 (93)
T 3t98_B 73 NVKVLKEQYLSYRKMFL 89 (93)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 37899999999999983
No 65
>2j5d_A BNIP3 TM, BCL2/adenovirus E1B 19 kDa protein-interacting protein 3; membrane protein, mitochondrion, transmembrane, transmembrane domain, membrane; NMR {Homo sapiens} PDB: 2ka1_A 2ka2_A
Probab=22.02 E-value=24 Score=23.05 Aligned_cols=17 Identities=35% Similarity=0.833 Sum_probs=12.7
Q ss_pred CCchhHHHHHhhcccch
Q psy13700 128 VPKFGIAHAMALGLGPW 144 (166)
Q Consensus 128 ~p~fgiaha~algl~pw 144 (166)
.|--=+.|.|++|||=.
T Consensus 21 ~psll~shiL~~GlgIy 37 (45)
T 2j5d_A 21 LPSLLLSHLLAIGLGIY 37 (45)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHhcceEE
Confidence 34455789999999854
No 66
>2a6z_A EMP47P (FORM2); beta sandwich, carbohydrate binding protein, cargo receptor, structural genomics, NPPSFA; 1.00A {Saccharomyces cerevisiae} SCOP: b.29.1.13 PDB: 2a70_A 2a71_A
Probab=20.16 E-value=67 Score=25.49 Aligned_cols=34 Identities=26% Similarity=0.338 Sum_probs=23.1
Q ss_pred CCceEeeeCCCCCeeEEEeeceeccc-ceeEEEEEecC
Q psy13700 50 NDWFRLESNKEGTKWFGSCWFFYNQL-KYEFQIEFDIP 86 (166)
Q Consensus 50 ~dwf~Lepn~dgTrW~gkcw~~~~~~-kyeF~lefdIP 86 (166)
++.++|-|+ ..+ .|-+|.-.|+. .=+|.++|+.=
T Consensus 36 ~~~IrLTp~--~~~-~G~iWs~~p~~~~~~weie~~Fr 70 (222)
T 2a6z_A 36 EGRIVLTSN--QNS-KGSLWLKQGFDLKDSFTMEWTFR 70 (222)
T ss_dssp TTEEESCCS--TTC-EEEEEESSCEECCSCEEEEEEEE
T ss_pred CCEEEECCC--CCC-eEEEEeCCCCCCCCCEEEEEEEE
Confidence 688899998 344 79999977774 44455544443
Done!