BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>psy13711
MFLRQATHYQVDLTGGPDSLITDEHTHYQVDLTGGPDQVYLIVSDWSKGFPLCPPQVSRF
LETPELHLGLSSTTSSTPTPSGTGNKALPLPSKPTPSSLALASLMSGEPVIDSGVRQRLF
RHLENCMSEIDLDFSASAEKLGITQDFSSEDDSAFPMLRVRPEPDSSTTTLLPVTHPTPT
KPNVTPPKKKSKTKMATQQSLIMSTTSEHSGDGNNNIGTPDSSTGCQTKPRSTVKKDTHS
PPLKRSLNKTLVVMSSPPLVASSNSIPPALKRANKPLMEKRRRARINQSLALLKALILDS
AKTENTKHSKLEKADILELTVRHLQRQKILSSDIRSKYKAGYEECSREVSRFLETPELHL
GLSSTTSSTPTPSGTGNKALPLPSKPTPSSLALASLMSGEPVIDSGVRQRLFRHLENCMS
EIDLDFSASAEKLGITQDFSSEDDSAFPMLRVRPEPDSSTTTLLPVTHPTPTKPNVTPPK
KKSKTKMASVGGGGEKTASDISDSNSNQSSSAVESAMSVLQLIPSRLPDGQVVFILPNYM
APSTSPPCKDDLKSSPPPLSNLDQPLDFSIKRDDSMWRPW

High Scoring Gene Products

Symbol, full name Information P value
hes4
Transcription factor HES-4
protein from Xenopus (Silurana) tropicalis 2.0e-35
HES1
Transcription factor HES-1
protein from Gallus gallus 2.2e-35
Side
similar to Deadpan
protein from Drosophila melanogaster 1.4e-34
her6
hairy-related 6
gene_product from Danio rerio 2.1e-34
Hes1
hairy and enhancer of split 1 (Drosophila)
protein from Mus musculus 1.4e-33
HES1
Transcription factor HES-1
protein from Bos taurus 2.2e-33
Hes1
hairy and enhancer of split 1 (Drosophila)
gene from Rattus norvegicus 2.3e-33
hes4-a
Transcription factor HES-4-A
protein from Xenopus laevis 2.8e-33
HES1
Transcription factor HES-1
protein from Bos taurus 7.7e-33
HES1
Transcription factor HES-1
protein from Homo sapiens 7.7e-33
HES1
Uncharacterized protein
protein from Sus scrofa 7.7e-33
hes1-a
Transcription factor HES-1-A
protein from Xenopus laevis 3.0e-32
hes1
Transcription factor HES-1
protein from Xenopus (Silurana) tropicalis 5.6e-32
hes1-b
Transcription factor HES-1-B
protein from Xenopus laevis 6.7e-31
her9
hairy-related 9
gene_product from Danio rerio 1.3e-29
HES4
Uncharacterized protein
protein from Canis lupus familiaris 2.0e-29
hes4-b
Transcription factor HES-4-B
protein from Xenopus laevis 8.5e-29
LOC100739264
Uncharacterized protein
protein from Sus scrofa 3.5e-26
HES4
Uncharacterized protein
protein from Canis lupus familiaris 5.2e-26
h
hairy
protein from Drosophila melanogaster 2.8e-25
dpn
deadpan
protein from Drosophila melanogaster 9.0e-24
HES4
Transcription factor HES-4
protein from Homo sapiens 3.9e-23
HES4
Transcription factor HES-4
protein from Homo sapiens 5.1e-23
HES4
Uncharacterized protein
protein from Canis lupus familiaris 8.8e-23
HES4
Uncharacterized protein
protein from Bos taurus 4.2e-22
HES2
Uncharacterized protein
protein from Bos taurus 2.2e-18
hes2
Transcription factor HES-2
protein from Xenopus laevis 3.9e-17
HES2
Uncharacterized protein
protein from Sus scrofa 7.9e-17
hes2.2
hairy and enhancer of split 2, tandem duplicate 2
gene_product from Danio rerio 5.1e-16
hes2.1
hairy and enhancer of split 2, tandem duplicate 1
gene_product from Danio rerio 5.1e-16
HES2
Transcription factor HES-2
protein from Homo sapiens 8.4e-16
her3
hairy-related 3
gene_product from Danio rerio 1.4e-15
HES2
Uncharacterized protein
protein from Canis lupus familiaris 1.0e-14
Hes2
hairy and enhancer of split 2 (Drosophila)
gene from Rattus norvegicus 7.8e-14
E(spl)mdelta-HLH
Enhancer of split mdelta, helix-loop-helix
protein from Drosophila melanogaster 8.3e-14
Hes2
hairy and enhancer of split 2 (Drosophila)
protein from Mus musculus 2.1e-13
Hes5
hairy and enhancer of split 5 (Drosophila)
protein from Mus musculus 3.0e-13
HES5
Uncharacterized protein
protein from Canis lupus familiaris 3.0e-13
HES5
HES5 protein
protein from Bos taurus 3.1e-13
Hes5
hairy and enhancer of split 5 (Drosophila)
gene from Rattus norvegicus 6.1e-13
lin-22 gene from Caenorhabditis elegans 7.4e-13
lin-22
Lin-22
protein from Caenorhabditis elegans 7.4e-13
HES5
Hairy and enhancer of split 5
protein from Gallus gallus 1.0e-12
HES5
Transcription factor HES-5
protein from Homo sapiens 1.3e-12
hes7.1-a
Transcription factor HES-7.1-A
protein from Xenopus laevis 1.6e-12
HES2
Transcription factor HES-2
protein from Homo sapiens 2.6e-12
hes7.1-b
Transcription factor HES-7.1-B
protein from Xenopus laevis 2.6e-12
E(spl)mgamma-HLH
Enhancer of split mgamma, helix-loop-helix
protein from Drosophila melanogaster 2.7e-12
hes7.1
Transcription factor HES-7.1
protein from Xenopus (Silurana) tropicalis 4.3e-12
E1B6Z2
Uncharacterized protein
protein from Bos taurus 7.1e-12
E(spl)m7-HLH
Enhancer of split m7, helix-loop-helix
protein from Drosophila melanogaster 8.9e-12
LOC419390
Uncharacterized protein
protein from Gallus gallus 1.2e-11
her8a
hairy-related 8a
gene_product from Danio rerio 1.6e-11
her8.2
hairy-related 8.2
gene_product from Danio rerio 7.9e-11
HES6
Uncharacterized protein
protein from Bos taurus 1.1e-10
Hes6
hairy and enhancer of split 6
protein from Mus musculus 1.6e-10
her5
hairy-related 5
gene_product from Danio rerio 1.7e-10
her13
hairy-related 13
gene_product from Danio rerio 1.8e-10
HES6
Transcription cofactor HES-6
protein from Homo sapiens 5.1e-10
LOC100622397
Uncharacterized protein
protein from Sus scrofa 5.1e-10
HES4
Transcription factor HES-4
protein from Homo sapiens 9.6e-10
her1
hairy-related 1
gene_product from Danio rerio 1.1e-09
Hes6
hairy and enhancer of split 6 (Drosophila)
gene from Rattus norvegicus 1.2e-09
Her
HES-related
protein from Drosophila melanogaster 1.4e-09
E(spl)mbeta-HLH
Enhancer of split mbeta, helix-loop-helix
protein from Drosophila melanogaster 1.4e-09
F1RIM0
Uncharacterized protein
protein from Sus scrofa 5.7e-09
HEY2
Uncharacterized protein
protein from Canis lupus familiaris 5.8e-09
LOC100037036
LOC100037036 protein
protein from Xenopus laevis 9.5e-09
HES7
Transcription factor HES-7
protein from Homo sapiens 2.7e-08
her12
hairy-related 12
gene_product from Danio rerio 3.5e-08
HES7
Transcription factor HES-7
protein from Homo sapiens 5.4e-08
her15.1
hairy and enhancer of split-related 15, tandem duplicate 1
gene_product from Danio rerio 5.8e-08
Hes7
hairy and enhancer of split 7 (Drosophila)
protein from Mus musculus 1.2e-07
her7
hairy and enhancer of split related-7
gene_product from Danio rerio 1.7e-07
HES7
Uncharacterized protein
protein from Bos taurus 1.9e-07
Hes7
hairy and enhancer of split 7 (Drosophila)
gene from Rattus norvegicus 2.4e-07
hes6
hairy and enhancer of split 6 (Drosophila)
gene_product from Danio rerio 3.2e-07
LOC100620745
Uncharacterized protein
protein from Sus scrofa 6.5e-07
HES6
Transcription cofactor HES-6
protein from Homo sapiens 7.0e-07
E(spl)m3-HLH
Enhancer of split m3, helix-loop-helix
protein from Drosophila melanogaster 8.3e-07
Hey
Hairy/E(spl)-related with YRPW motif
protein from Drosophila melanogaster 8.6e-07
heyl
hairy/enhancer-of-split related with YRPW motif-like
gene_product from Danio rerio 1.6e-06
Heyl
hairy/enhancer-of-split related with YRPW motif-like
protein from Mus musculus 1.8e-06
Heyl
hairy/enhancer-of-split related with YRPW motif-like
gene from Rattus norvegicus 1.8e-06
LOC100518256
Uncharacterized protein
protein from Sus scrofa 3.1e-06
PABPC4
Uncharacterized protein
protein from Canis lupus familiaris 5.1e-06
HEYL
Hairy/enhancer-of-split related with YRPW motif-like protein
protein from Bos taurus 5.1e-06
HEYL
Hairy/enhancer-of-split-related with YRPW motif-like protein
protein from Bos taurus 5.2e-06
Hes3
hairy and enhancer of split 3 (Drosophila)
protein from Mus musculus 5.5e-06
Hey1
hairy/enhancer-of-split related with YRPW motif 1
protein from Mus musculus 7.0e-06
hey1
Hairy/enhancer-of-split related with YRPW motif protein 1
protein from Xenopus (Silurana) tropicalis 7.9e-06

The BLAST search returned 9 gene products which did not match your query constraints. Please see the full BLAST report below for the details.

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy13711
        (580 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

UNIPROTKB|Q6PBD4 - symbol:hes4 "Transcription factor HES-...   252  2.0e-35   5
UNIPROTKB|O57337 - symbol:HES1 "Transcription factor HES-...   254  2.2e-35   5
FB|FBgn0032741 - symbol:Side "similar to Deadpan" species...   316  1.4e-34   3
ZFIN|ZDB-GENE-980526-144 - symbol:her6 "hairy-related 6" ...   255  2.1e-34   4
MGI|MGI:104853 - symbol:Hes1 "hairy and enhancer of split...   259  1.4e-33   3
UNIPROTKB|G3N2D5 - symbol:HES1 "Transcription factor HES-...   259  2.2e-33   4
RGD|62081 - symbol:Hes1 "hairy and enhancer of split 1 (D...   259  2.3e-33   3
UNIPROTKB|Q90Z12 - symbol:hes4-a "Transcription factor HE...   263  2.8e-33   4
UNIPROTKB|Q3ZBG4 - symbol:HES1 "Transcription factor HES-...   259  7.7e-33   3
UNIPROTKB|Q14469 - symbol:HES1 "Transcription factor HES-...   259  7.7e-33   3
UNIPROTKB|I3LM61 - symbol:HES1 "Uncharacterized protein" ...   259  7.7e-33   3
UNIPROTKB|Q6IRB2 - symbol:hes1-a "Transcription factor HE...   261  3.0e-32   3
UNIPROTKB|Q5PPM5 - symbol:hes1 "Transcription factor HES-...   258  5.6e-32   3
UNIPROTKB|Q8AVU4 - symbol:hes1-b "Transcription factor HE...   261  6.7e-31   3
ZFIN|ZDB-GENE-011213-1 - symbol:her9 "hairy-related 9" sp...   259  1.3e-29   3
UNIPROTKB|E2R7Q8 - symbol:HES4 "Uncharacterized protein" ...   249  2.0e-29   4
UNIPROTKB|Q90VV1 - symbol:hes4-b "Transcription factor HE...   254  8.5e-29   3
UNIPROTKB|I3LBX1 - symbol:HES4 "Uncharacterized protein" ...   253  3.5e-26   3
UNIPROTKB|J9NTM5 - symbol:HES4 "Uncharacterized protein" ...   249  5.2e-26   3
FB|FBgn0001168 - symbol:h "hairy" species:7227 "Drosophil...   229  2.8e-25   4
FB|FBgn0010109 - symbol:dpn "deadpan" species:7227 "Droso...   231  9.0e-24   3
UNIPROTKB|Q9HCC6 - symbol:HES4 "Transcription factor HES-...   249  3.9e-23   2
UNIPROTKB|E9PB28 - symbol:HES4 "Transcription factor HES-...   248  5.1e-23   2
UNIPROTKB|J9NV17 - symbol:HES4 "Uncharacterized protein" ...   246  8.8e-23   2
UNIPROTKB|E1BP65 - symbol:HES4 "Uncharacterized protein" ...   241  4.2e-22   2
UNIPROTKB|F1N0L3 - symbol:HES2 "Uncharacterized protein" ...   196  2.2e-18   2
UNIPROTKB|Q00P32 - symbol:hes2 "Transcription factor HES-...   197  3.9e-17   2
UNIPROTKB|F1RIL7 - symbol:HES2 "Uncharacterized protein" ...   182  7.9e-17   2
ZFIN|ZDB-GENE-060825-55 - symbol:hes2.2 "hairy and enhanc...   186  5.1e-16   2
ZFIN|ZDB-GENE-081104-104 - symbol:hes2.1 "hairy and enhan...   186  5.1e-16   2
UNIPROTKB|Q9Y543 - symbol:HES2 "Transcription factor HES-...   184  8.4e-16   2
ZFIN|ZDB-GENE-980526-204 - symbol:her3 "hairy-related 3" ...   202  1.4e-15   1
UNIPROTKB|E2R0N6 - symbol:HES2 "Uncharacterized protein" ...   175  1.0e-14   2
RGD|62082 - symbol:Hes2 "hairy and enhancer of split 2 (D...   186  7.8e-14   1
FB|FBgn0002734 - symbol:E(spl)mdelta-HLH "Enhancer of spl...   163  8.3e-14   2
MGI|MGI:1098624 - symbol:Hes2 "hairy and enhancer of spli...   182  2.1e-13   1
MGI|MGI:104876 - symbol:Hes5 "hairy and enhancer of split...   156  3.0e-13   2
UNIPROTKB|E2QXY9 - symbol:HES5 "Uncharacterized protein" ...   155  3.0e-13   2
UNIPROTKB|A6H787 - symbol:HES5 "HES5 protein" species:991...   153  3.1e-13   2
RGD|621340 - symbol:Hes5 "hairy and enhancer of split 5 (...   156  6.1e-13   2
WB|WBGene00003008 - symbol:lin-22 species:6239 "Caenorhab...   160  7.4e-13   2
UNIPROTKB|G5EF76 - symbol:lin-22 "Protein LIN-22" species...   160  7.4e-13   2
UNIPROTKB|Q5D212 - symbol:HES5 "Uncharacterized protein" ...   154  1.0e-12   2
UNIPROTKB|Q5TA89 - symbol:HES5 "Transcription factor HES-...   152  1.3e-12   2
UNIPROTKB|Q8UW74 - symbol:hes7.1-a "Transcription factor ...   174  1.6e-12   1
UNIPROTKB|K7EJQ0 - symbol:HES2 "Transcription factor HES-...   172  2.6e-12   1
UNIPROTKB|Q8UW72 - symbol:hes7.1-b "Transcription factor ...   172  2.6e-12   1
FB|FBgn0002735 - symbol:E(spl)mgamma-HLH "Enhancer of spl...   152  2.7e-12   2
UNIPROTKB|F1NWS0 - symbol:F1NWS0 "Uncharacterized protein...   145  3.7e-12   3
UNIPROTKB|Q28HA8 - symbol:hes7.1 "Transcription factor HE...   170  4.3e-12   1
UNIPROTKB|F1P2S5 - symbol:F1P2S5 "Uncharacterized protein...   145  4.7e-12   3
UNIPROTKB|F1NWR8 - symbol:F1NWR8 "Uncharacterized protein...   154  5.4e-12   3
UNIPROTKB|E1B6Z2 - symbol:E1B6Z2 "Uncharacterized protein...   150  7.1e-12   2
FB|FBgn0002633 - symbol:E(spl)m7-HLH "Enhancer of split m...   151  8.9e-12   2
UNIPROTKB|E1BW65 - symbol:LOC419390 "Uncharacterized prot...   144  1.2e-11   2
ZFIN|ZDB-GENE-030131-2376 - symbol:her8a "hairy-related 8...   155  1.6e-11   2
UNIPROTKB|E1BVE8 - symbol:LOC419390 "Uncharacterized prot...   142  2.0e-11   2
ZFIN|ZDB-GENE-060815-4 - symbol:her8.2 "hairy-related 8.2...   155  7.9e-11   2
UNIPROTKB|F1MWE6 - symbol:HES6 "Uncharacterized protein" ...   154  1.1e-10   2
MGI|MGI:1859852 - symbol:Hes6 "hairy and enhancer of spli...   154  1.6e-10   2
ZFIN|ZDB-GENE-990415-90 - symbol:her5 "hairy-related 5" s...   157  1.7e-10   2
ZFIN|ZDB-GENE-050228-1 - symbol:her13 "hairy-related 13" ...   142  1.8e-10   2
UNIPROTKB|Q96HZ4 - symbol:HES6 "Transcription cofactor HE...   154  5.1e-10   2
UNIPROTKB|F1SIU5 - symbol:HES6 "Uncharacterized protein" ...   154  5.1e-10   2
UNIPROTKB|D6REB3 - symbol:HES4 "Transcription factor HES-...   137  9.6e-10   2
ZFIN|ZDB-GENE-980526-125 - symbol:her1 "hairy-related 1" ...   133  1.1e-09   4
RGD|1312047 - symbol:Hes6 "hairy and enhancer of split 6 ...   151  1.2e-09   2
FB|FBgn0030899 - symbol:Her "HES-related" species:7227 "D...   126  1.4e-09   2
FB|FBgn0002733 - symbol:E(spl)mbeta-HLH "Enhancer of spli...   130  1.4e-09   3
UNIPROTKB|E1C2Y3 - symbol:HES6 "Uncharacterized protein" ...   145  2.3e-09   1
UNIPROTKB|E1C412 - symbol:HES6 "Uncharacterized protein" ...   151  2.3e-09   2
UNIPROTKB|F1RIM0 - symbol:HES3 "Uncharacterized protein" ...   141  5.7e-09   2
UNIPROTKB|J9P9B3 - symbol:HEY2 "Uncharacterized protein" ...   123  5.8e-09   2
UNIPROTKB|E1BVD7 - symbol:E1BVD7 "Uncharacterized protein...   141  6.1e-09   1
UNIPROTKB|F1P0F5 - symbol:F1P0F5 "Uncharacterized protein...   141  6.1e-09   1
UNIPROTKB|A1L3K9 - symbol:LOC100037036 "LOC100037036 prot...   138  9.5e-09   3
UNIPROTKB|J3KSH6 - symbol:HES7 "Transcription factor HES-...   135  2.7e-08   1
ZFIN|ZDB-GENE-040824-5 - symbol:her12 "hairy-related 12" ...   134  3.5e-08   1
UNIPROTKB|Q9BYE0 - symbol:HES7 "Transcription factor HES-...   137  5.4e-08   2
ZFIN|ZDB-GENE-030707-2 - symbol:her15.1 "hairy and enhanc...   132  5.8e-08   1
MGI|MGI:2135679 - symbol:Hes7 "hairy and enhancer of spli...   136  1.2e-07   2
UNIPROTKB|F8VPC9 - symbol:HES7 "Transcription factor HES-...   135  1.3e-07   2
ZFIN|ZDB-GENE-000427-6 - symbol:her7 "hairy and enhancer ...   139  1.7e-07   1
UNIPROTKB|E1BJY1 - symbol:HES7 "Uncharacterized protein" ...   138  1.9e-07   2
RGD|1305914 - symbol:Hes7 "hairy and enhancer of split 7 ...   136  2.4e-07   2
ZFIN|ZDB-GENE-030828-5 - symbol:hes6 "hairy and enhancer ...   124  3.2e-07   3
UNIPROTKB|F1SSX6 - symbol:HES7 "Uncharacterized protein" ...   137  6.5e-07   1
UNIPROTKB|B8ZZA9 - symbol:HES6 "Transcription cofactor HE...   122  7.0e-07   1
FB|FBgn0002609 - symbol:E(spl)m3-HLH "Enhancer of split m...   136  8.3e-07   1
FB|FBgn0027788 - symbol:Hey "Hairy/E(spl)-related with YR...   143  8.6e-07   1
ZFIN|ZDB-GENE-030131-7074 - symbol:heyl "hairy/enhancer-o...   130  1.6e-06   2
MGI|MGI:1860511 - symbol:Heyl "hairy/enhancer-of-split re...   138  1.8e-06   1
RGD|1305022 - symbol:Heyl "hairy/enhancer-of-split relate...   138  1.8e-06   1
UNIPROTKB|I3LJW8 - symbol:HEYL "Uncharacterized protein" ...   136  3.1e-06   1
UNIPROTKB|E2R9J1 - symbol:PABPC4 "Uncharacterized protein...   134  5.1e-06   1
UNIPROTKB|Q2NL18 - symbol:HEYL "Hairy/enhancer-of-split r...   134  5.1e-06   1
UNIPROTKB|G3X6Q3 - symbol:HEYL "Hairy/enhancer-of-split-r...   134  5.2e-06   1
MGI|MGI:104877 - symbol:Hes3 "hairy and enhancer of split...   117  5.5e-06   2
MGI|MGI:1341800 - symbol:Hey1 "hairy/enhancer-of-split re...   132  7.0e-06   1
UNIPROTKB|Q66KK8 - symbol:hey1 "Hairy/enhancer-of-split r...   127  7.9e-06   2

WARNING:  Descriptions of 39 database sequences were not reported due to the
          limiting value of parameter V = 100.


>UNIPROTKB|Q6PBD4 [details] [associations]
            symbol:hes4 "Transcription factor HES-4" species:8364
            "Xenopus (Silurana) tropicalis" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0002088 "lens development in camera-type eye" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISS] [GO:0008283 "cell
            proliferation" evidence=ISS] [GO:0014029 "neural crest formation"
            evidence=ISS] [GO:0021501 "prechordal plate formation"
            evidence=ISS] [GO:0033504 "floor plate development" evidence=ISS]
            [GO:0043066 "negative regulation of apoptotic process"
            evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
            evidence=ISS] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0046982 "protein
            heterodimerization activity" evidence=ISS] [GO:0048642 "negative
            regulation of skeletal muscle tissue development" evidence=ISS]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0005634
            GO:GO:0043066 GO:GO:0008283 GO:GO:0043565 GO:GO:0007219
            GO:GO:0006351 GO:GO:0000122 GO:GO:0007517 GO:GO:0046982
            Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR018352 SMART:SM00511
            GO:GO:0002088 GO:GO:0033504 GO:GO:0048642 eggNOG:NOG319418
            GO:GO:0021501 GO:GO:0014029 GeneTree:ENSGT00700000104168 KO:K06054
            HOGENOM:HOG000236346 OrthoDB:EOG4TTGK6 CTD:57801 EMBL:AC151819
            EMBL:CR760275 EMBL:BC059761 RefSeq:NP_988870.1 UniGene:Str.6018
            ProteinModelPortal:Q6PBD4 STRING:Q6PBD4 Ensembl:ENSXETT00000003678
            GeneID:394465 KEGG:xtr:394465 Xenbase:XB-GENE-487830
            InParanoid:Q6PBD4 Bgee:Q6PBD4 Uniprot:Q6PBD4
        Length = 281

 Score = 252 (93.8 bits), Expect = 2.0e-35, Sum P(5) = 2.0e-35
 Identities = 52/95 (54%), Positives = 74/95 (77%)

Query:   271 KRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQR-QKI 329
             ++++KP+MEKRRRARIN+SL  LK LILD+ K ++++HSKLEKADILE+TV+HL+  Q++
Sbjct:    35 RKSSKPIMEKRRRARINESLGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQRV 94

Query:   330 -----LSSD--IRSKYKAGYEECSREVSRFLETPE 357
                  L++D  +  KY+AG+ EC  EV+RFL T E
Sbjct:    95 QMTAALTADPSVLGKYRAGFNECMNEVTRFLSTCE 129

 Score = 54 (24.1 bits), Expect = 2.0e-35, Sum P(5) = 2.0e-35
 Identities = 13/26 (50%), Positives = 18/26 (69%)

Query:   521 QLIPSRLPDGQVVFILPNYMAPSTSP 546
             QL+P+   DGQ  F++PN  A +TSP
Sbjct:   199 QLVPAT--DGQFAFLIPN-PAYTTSP 221

 Score = 48 (22.0 bits), Expect = 2.0e-35, Sum P(5) = 2.0e-35
 Identities = 8/20 (40%), Positives = 14/20 (70%)

Query:   403 IDSGVRQRLFRHLENCMSEI 422
             +++ VR RL  HL +C+ +I
Sbjct:   131 VNTEVRTRLLGHLSSCLGQI 150

 Score = 47 (21.6 bits), Expect = 2.0e-35, Sum P(5) = 2.0e-35
 Identities = 10/26 (38%), Positives = 14/26 (53%)

Query:   557 PPLSNLDQPLDFSIKRD--DSMWRPW 580
             P ++    PL  S   D  +S+WRPW
Sbjct:   256 PHMAQAVSPLGGSTGADSAESVWRPW 281

 Score = 38 (18.4 bits), Expect = 2.0e-35, Sum P(5) = 2.0e-35
 Identities = 9/26 (34%), Positives = 12/26 (46%)

Query:   218 GTPDSSTGCQTKPRSTVKKDTHSPPL 243
             G P SS     KP+S  +    S P+
Sbjct:    16 GAPASSAQTPDKPKSASEHRKSSKPI 41


>UNIPROTKB|O57337 [details] [associations]
            symbol:HES1 "Transcription factor HES-1" species:9031
            "Gallus gallus" [GO:0046983 "protein dimerization activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 GO:GO:0005634 GO:GO:0006355
            GO:GO:0003677 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
            InterPro:IPR018352 SMART:SM00511 eggNOG:NOG319418 KO:K06054
            CTD:3280 HOGENOM:HOG000236346 HOVERGEN:HBG005960 EMBL:AF032966
            IPI:IPI00604360 RefSeq:NP_001005848.1 RefSeq:NP_989803.1
            UniGene:Gga.3754 ProteinModelPortal:O57337 STRING:O57337
            GeneID:395128 KEGG:gga:395128 NextBio:20815220 Uniprot:O57337
        Length = 290

 Score = 254 (94.5 bits), Expect = 2.2e-35, Sum P(5) = 2.2e-35
 Identities = 54/95 (56%), Positives = 74/95 (77%)

Query:   271 KRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHL---QRQ 327
             ++++KP+MEKRRRARIN+SL  LK LILD+ K ++++HSKLEKADILE+TV+HL   QR 
Sbjct:    36 RKSSKPIMEKRRRARINESLGQLKMLILDALKKDSSRHSKLEKADILEMTVKHLRNLQRA 95

Query:   328 KI---LSSD--IRSKYKAGYEECSREVSRFLETPE 357
             ++   LS+D  +  KY+AG+ EC  EV+RFL T E
Sbjct:    96 QMAAALSADPSVLGKYRAGFNECMNEVTRFLSTCE 130

 Score = 54 (24.1 bits), Expect = 2.2e-35, Sum P(5) = 2.2e-35
 Identities = 12/27 (44%), Positives = 16/27 (59%)

Query:   521 QLIPSRLPDGQVVFILPNYMAPSTSPP 547
             QL+P+   DGQ  F++PN   P  S P
Sbjct:   205 QLVPAT--DGQFAFLIPNPAFPPGSGP 229

 Score = 46 (21.3 bits), Expect = 2.2e-35, Sum P(5) = 2.2e-35
 Identities = 8/20 (40%), Positives = 13/20 (65%)

Query:   403 IDSGVRQRLFRHLENCMSEI 422
             +++ VR RL  HL  C+ +I
Sbjct:   132 VNADVRARLLGHLSACLGQI 151

 Score = 45 (20.9 bits), Expect = 2.2e-35, Sum P(5) = 2.2e-35
 Identities = 8/23 (34%), Positives = 13/23 (56%)

Query:   558 PLSNLDQPLDFSIKRDDSMWRPW 580
             P S    P+    +R +++WRPW
Sbjct:   271 PASQAGSPI---AERREAVWRPW 290

 Score = 39 (18.8 bits), Expect = 2.2e-35, Sum P(5) = 2.2e-35
 Identities = 9/26 (34%), Positives = 13/26 (50%)

Query:   218 GTPDSSTGCQTKPRSTVKKDTHSPPL 243
             G P S++    KPRS  +    S P+
Sbjct:    17 GAPASASHTPDKPRSASEHRKSSKPI 42


>FB|FBgn0032741 [details] [associations]
            symbol:Side "similar to Deadpan" species:7227 "Drosophila
            melanogaster" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
            "nucleus" evidence=IC] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=ISS] [GO:0046983 "protein dimerization activity"
            evidence=IEA] InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010
            Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353
            GO:GO:0005634 EMBL:AE014134 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GeneTree:ENSGT00700000104130 EMBL:AY060791 RefSeq:NP_523599.1
            UniGene:Dm.2592 SMR:Q9VJ16 IntAct:Q9VJ16 STRING:Q9VJ16
            EnsemblMetazoa:FBtr0081141 GeneID:35168 KEGG:dme:Dmel_CG10446
            UCSC:CG10446-RA CTD:35168 FlyBase:FBgn0032741 eggNOG:NOG287577
            InParanoid:Q9VJ16 OMA:EIDVEIC OrthoDB:EOG4GHX5R GenomeRNAi:35168
            NextBio:792196 Uniprot:Q9VJ16
        Length = 507

 Score = 316 (116.3 bits), Expect = 1.4e-34, Sum P(3) = 1.4e-34
 Identities = 70/116 (60%), Positives = 85/116 (73%)

Query:   249 KTLVVMSSPPLVASSNSIPPALKRANKPLMEKRRRARINQSLALLKALILDSAKTENTK- 307
             K++ ++SS   V SS  I    KR NKPLMEKRRRARINQSLA+LKALIL+S KT+N K 
Sbjct:    32 KSIGLVSSTQNVTSSQDIS---KRTNKPLMEKRRRARINQSLAILKALILESTKTQNAKN 88

Query:   308 ------HSKLEKADILELTVRHLQRQKILSSDIRSKYKAGYEECSREVSRFLETPE 357
                   H+KLEKADILELTVRH QR + L     +KY+AGY +C+REV+R+L TPE
Sbjct:    89 GEGQAKHTKLEKADILELTVRHFQRHRNLDDPTVNKYRAGYTDCAREVARYLATPE 144

 Score = 63 (27.2 bits), Expect = 1.4e-34, Sum P(3) = 1.4e-34
 Identities = 10/22 (45%), Positives = 17/22 (77%)

Query:   404 DSGVRQRLFRHLENCMSEIDLD 425
             + G + RL RHL+ C++EID++
Sbjct:   156 EPGSKARLLRHLDQCIAEIDVE 177

 Score = 52 (23.4 bits), Expect = 1.4e-34, Sum P(3) = 1.4e-34
 Identities = 7/9 (77%), Positives = 9/9 (100%)

Query:   572 RDDSMWRPW 580
             +D+SMWRPW
Sbjct:   499 QDESMWRPW 507


>ZFIN|ZDB-GENE-980526-144 [details] [associations]
            symbol:her6 "hairy-related 6" species:7955 "Danio
            rerio" [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0046983 "protein dimerization activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0001757
            "somite specification" evidence=IMP] [GO:0009952
            "anterior/posterior pattern specification" evidence=IMP]
            [GO:0007219 "Notch signaling pathway" evidence=IMP] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0021794 "thalamus development" evidence=IMP]
            [GO:0045664 "regulation of neuron differentiation" evidence=IMP]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353
            ZFIN:ZDB-GENE-980526-144 GO:GO:0005634 GO:GO:0045664 GO:GO:0006355
            GO:GO:0003677 GO:GO:0007219 GO:GO:0006351 Gene3D:4.10.280.10
            SUPFAM:SSF47459 InterPro:IPR018352 SMART:SM00511 GO:GO:0021794
            GO:GO:0001757 KO:K06054 HOGENOM:HOG000236346 HOVERGEN:HBG005960
            EMBL:X97333 IPI:IPI00511507 RefSeq:NP_571154.1 UniGene:Dr.75065
            ProteinModelPortal:Q90468 STRING:Q90468 GeneID:30288 KEGG:dre:30288
            CTD:30288 InParanoid:Q90468 NextBio:20806731 ArrayExpress:Q90468
            Uniprot:Q90468
        Length = 334

 Score = 255 (94.8 bits), Expect = 2.1e-34, Sum P(4) = 2.1e-34
 Identities = 63/138 (45%), Positives = 90/138 (65%)

Query:   230 PRSTVKKDTHSP--PLKRSLNKTLVVMSSPPLVASSNSIPPALKRANKPLMEKRRRARIN 287
             P   ++K++ SP      S+N T       P  AS +      ++++KP+MEKRRRARIN
Sbjct:    66 PADIMEKNSSSPVAATPASMNTT----PDKPKTASEH------RKSSKPIMEKRRRARIN 115

Query:   288 QSLALLKALILDSAKTENTKHSKLEKADILELTVRHL---QRQKI---LSSD--IRSKYK 339
             +SL  LK LILD+ K ++++HSKLEKADILE+TV+HL   QR ++   L++D  +  KY+
Sbjct:   116 ESLGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNMQRAQMTAALNTDPTVLGKYR 175

Query:   340 AGYEECSREVSRFLETPE 357
             AG+ EC  EV+RFL T E
Sbjct:   176 AGFSECMNEVTRFLSTCE 193

 Score = 77 (32.2 bits), Expect = 2.1e-34, Sum P(4) = 2.1e-34
 Identities = 20/60 (33%), Positives = 28/60 (46%)

Query:   521 QLIPSRLPDGQVVFILPNYMAPSTSPPCKDDLKSSPPPLSNLDQPLDFSIKRDDSMWRPW 580
             QL+P+   DGQ  F++PN       P       +S  P+     P   S+   DS+WRPW
Sbjct:   278 QLVPAT--DGQFAFLIPNAAFAPNGPVIPVYANNSNTPVPVAVSPGAPSVT-SDSVWRPW 334

 Score = 52 (23.4 bits), Expect = 2.1e-34, Sum P(4) = 2.1e-34
 Identities = 9/21 (42%), Positives = 16/21 (76%)

Query:   403 IDSGVRQRLFRHLENCMSEID 423
             +++ VR RL  HL +CM++I+
Sbjct:   195 VNTEVRTRLLGHLASCMTQIN 215

 Score = 37 (18.1 bits), Expect = 2.1e-34, Sum P(4) = 2.1e-34
 Identities = 9/25 (36%), Positives = 15/25 (60%)

Query:   111 IDSGVRQRLFRHLENCMSEIDLDFS 135
             ++SG   R+  H  NC+S +D  +S
Sbjct:    17 LNSGHFVRISIHNWNCISVLDSVYS 41


>MGI|MGI:104853 [details] [associations]
            symbol:Hes1 "hairy and enhancer of split 1 (Drosophila)"
            species:10090 "Mus musculus" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter"
            evidence=ISO;IGI;IMP;IDA] [GO:0000981 "sequence-specific DNA
            binding RNA polymerase II transcription factor activity"
            evidence=IDA] [GO:0001078 "RNA polymerase II core promoter proximal
            region sequence-specific DNA binding transcription factor activity
            involved in negative regulation of transcription" evidence=IDA]
            [GO:0001701 "in utero embryonic development" evidence=IGI]
            [GO:0001889 "liver development" evidence=IMP] [GO:0003143
            "embryonic heart tube morphogenesis" evidence=IMP] [GO:0003151
            "outflow tract morphogenesis" evidence=IMP] [GO:0003266 "regulation
            of secondary heart field cardioblast proliferation" evidence=IMP]
            [GO:0003281 "ventricular septum development" evidence=IMP]
            [GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0006357 "regulation of transcription from RNA polymerase II
            promoter" evidence=IGI] [GO:0006461 "protein complex assembly"
            evidence=IDA] [GO:0007155 "cell adhesion" evidence=IGI] [GO:0007219
            "Notch signaling pathway" evidence=ISO;NAS;TAS] [GO:0007224
            "smoothened signaling pathway" evidence=IDA] [GO:0007262 "STAT
            protein import into nucleus" evidence=IDA] [GO:0007389 "pattern
            specification process" evidence=IGI;IMP] [GO:0008134 "transcription
            factor binding" evidence=NAS] [GO:0008284 "positive regulation of
            cell proliferation" evidence=IMP] [GO:0016477 "cell migration"
            evidence=IGI] [GO:0021537 "telencephalon development"
            evidence=IGI;IMP] [GO:0021555 "midbrain-hindbrain boundary
            morphogenesis" evidence=IGI] [GO:0021557 "oculomotor nerve
            development" evidence=IGI] [GO:0021558 "trochlear nerve
            development" evidence=IGI] [GO:0021575 "hindbrain morphogenesis"
            evidence=IGI] [GO:0021861 "forebrain radial glial cell
            differentiation" evidence=ISO] [GO:0021915 "neural tube
            development" evidence=IGI] [GO:0021983 "pituitary gland
            development" evidence=IGI;IMP] [GO:0021984 "adenohypophysis
            development" evidence=IMP] [GO:0030324 "lung development"
            evidence=IMP] [GO:0030513 "positive regulation of BMP signaling
            pathway" evidence=IGI] [GO:0030901 "midbrain development"
            evidence=IGI] [GO:0031016 "pancreas development" evidence=IMP]
            [GO:0035019 "somatic stem cell maintenance" evidence=IMP]
            [GO:0035909 "aorta morphogenesis" evidence=IMP] [GO:0035910
            "ascending aorta morphogenesis" evidence=IMP] [GO:0042102 "positive
            regulation of T cell proliferation" evidence=IMP] [GO:0042491
            "auditory receptor cell differentiation" evidence=IMP] [GO:0042517
            "positive regulation of tyrosine phosphorylation of Stat3 protein"
            evidence=IDA] [GO:0042668 "auditory receptor cell fate
            determination" evidence=IMP] [GO:0042803 "protein homodimerization
            activity" evidence=IDA] [GO:0042826 "histone deacetylase binding"
            evidence=ISO] [GO:0043388 "positive regulation of DNA binding"
            evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
            evidence=ISO] [GO:0045165 "cell fate commitment" evidence=IMP]
            [GO:0045596 "negative regulation of cell differentiation"
            evidence=IMP] [GO:0045598 "regulation of fat cell differentiation"
            evidence=IMP] [GO:0045608 "negative regulation of auditory receptor
            cell differentiation" evidence=IMP] [GO:0045665 "negative
            regulation of neuron differentiation" evidence=IGI;IMP] [GO:0045747
            "positive regulation of Notch signaling pathway" evidence=IMP]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=ISO;IMP] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=IMP] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IGI;IMP] [GO:0045977 "positive regulation of mitotic cell
            cycle, embryonic" evidence=IMP] [GO:0046331 "lateral inhibition"
            evidence=IMP] [GO:0046427 "positive regulation of JAK-STAT cascade"
            evidence=IDA] [GO:0046983 "protein dimerization activity"
            evidence=IEA] [GO:0048469 "cell maturation" evidence=IGI]
            [GO:0048505 "regulation of timing of cell differentiation"
            evidence=IMP] [GO:0048538 "thymus development" evidence=IMP]
            [GO:0048667 "cell morphogenesis involved in neuron differentiation"
            evidence=IGI] [GO:0048711 "positive regulation of astrocyte
            differentiation" evidence=IDA] [GO:0048715 "negative regulation of
            oligodendrocyte differentiation" evidence=IDA] [GO:0048844 "artery
            morphogenesis" evidence=IMP] [GO:0050767 "regulation of
            neurogenesis" evidence=IGI] [GO:0060037 "pharyngeal system
            development" evidence=IMP] [GO:0060164 "regulation of timing of
            neuron differentiation" evidence=IGI;IMP] [GO:0060253 "negative
            regulation of glial cell proliferation" evidence=IDA] [GO:0060412
            "ventricular septum morphogenesis" evidence=IMP] [GO:0060716
            "labyrinthine layer blood vessel development" evidence=IMP]
            [GO:0061009 "common bile duct development" evidence=IMP]
            [GO:0061106 "negative regulation of stomach neuroendocrine cell
            differentiation" evidence=IMP] [GO:0061309 "cardiac neural crest
            cell development involved in outflow tract morphogenesis"
            evidence=IMP] [GO:0071820 "N-box binding" evidence=IDA] [GO:0090102
            "cochlea development" evidence=IGI;IMP] [GO:0097084 "vascular
            smooth muscle cell development" evidence=IMP] [GO:0097150 "neuronal
            stem cell maintenance" evidence=ISO;IMP] [GO:2000227 "negative
            regulation of pancreatic A cell differentiation" evidence=IMP]
            [GO:2000737 "negative regulation of stem cell differentiation"
            evidence=ISO] [GO:2000974 "negative regulation of pro-B cell
            differentiation" evidence=ISO] [GO:2000978 "negative regulation of
            forebrain neuron differentiation" evidence=ISO] [GO:2000981
            "negative regulation of inner ear receptor cell differentiation"
            evidence=IMP] Reactome:REACT_13641 InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 MGI:MGI:104853 GO:GO:0005737
            GO:GO:0042803 GO:GO:0005654 GO:GO:0016477 GO:GO:0006461
            GO:GO:0030324 GO:GO:0001078 GO:GO:0043565 GO:GO:0045944
            GO:GO:0007155 GO:GO:0007219 GO:GO:0001889 GO:GO:0045747
            Reactome:REACT_127416 GO:GO:0030901 GO:GO:0030513 GO:GO:0003143
            GO:GO:0060037 GO:GO:0042102 GO:GO:0097084 GO:GO:0046331
            GO:GO:0048538 GO:GO:0035019 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GO:GO:0008134 GO:GO:0031018 GO:GO:0060716 GO:GO:0045598
            GO:GO:0072012 GO:GO:0003151 GO:GO:0007224 GO:GO:0042517
            GO:GO:0021984 GO:GO:0021575 GO:GO:0090102 GO:GO:0042668
            GO:GO:0048469 InterPro:IPR018352 SMART:SM00511 GO:GO:0048711
            GO:GO:0021537 GO:GO:0060675 GO:GO:0048715 GO:GO:0043388
            GO:GO:0060412 GO:GO:0003266 GO:GO:0045608 GO:GO:0097150
            eggNOG:NOG319418 GO:GO:0048667 GO:GO:0007262 GO:GO:0060253
            GO:GO:0021555 GO:GO:0021861 GO:GO:0061309 KO:K06054 CTD:3280
            HOGENOM:HOG000236346 HOVERGEN:HBG005960 OrthoDB:EOG4TTGK6
            GO:GO:0071820 GO:GO:2000978 GO:GO:2000974 OMA:TKVYGGF GO:GO:0035910
            GO:GO:0072049 GO:GO:0061009 GO:GO:0072282 GO:GO:2000227
            GO:GO:2000737 GO:GO:0061106 GO:GO:0021557 GO:GO:0045977
            GO:GO:0060164 GO:GO:0072141 GO:GO:0072050 GO:GO:0021558 EMBL:D16464
            EMBL:BC018375 EMBL:BC051428 IPI:IPI00118341 PIR:A53336
            RefSeq:NP_032261.1 UniGene:Mm.390859 ProteinModelPortal:P35428
            SMR:P35428 STRING:P35428 PhosphoSite:P35428 PRIDE:P35428
            Ensembl:ENSMUST00000023171 GeneID:15205 KEGG:mmu:15205
            InParanoid:P35428 Reactome:REACT_118814 ChEMBL:CHEMBL1075292
            NextBio:287757 Bgee:P35428 CleanEx:MM_HES1 Genevestigator:P35428
            GermOnline:ENSMUSG00000022528 Uniprot:P35428
        Length = 282

 Score = 259 (96.2 bits), Expect = 1.4e-33, Sum P(3) = 1.4e-33
 Identities = 59/121 (48%), Positives = 85/121 (70%)

Query:   248 NKTLVVMSSPPLVASSNSIPPAL---KRANKPLMEKRRRARINQSLALLKALILDSAKTE 304
             N +  V ++P  V ++   P      ++++KP+MEKRRRARIN+SL+ LK LILD+ K +
Sbjct:     9 NSSSPVAATPASVNTTPDKPKTASEHRKSSKPIMEKRRRARINESLSQLKTLILDALKKD 68

Query:   305 NTKHSKLEKADILELTVRHL---QRQKI---LSSD--IRSKYKAGYEECSREVSRFLETP 356
             +++HSKLEKADILE+TV+HL   QR ++   LS+D  +  KY+AG+ EC  EV+RFL T 
Sbjct:    69 SSRHSKLEKADILEMTVKHLRNLQRAQMTAALSTDPSVLGKYRAGFSECMNEVTRFLSTC 128

Query:   357 E 357
             E
Sbjct:   129 E 129

 Score = 86 (35.3 bits), Expect = 1.4e-33, Sum P(3) = 1.4e-33
 Identities = 21/61 (34%), Positives = 29/61 (47%)

Query:   521 QLIPSRLPDGQVVFILPNYMAPSTSPPCKDDLKSSPPPLS-NLDQPLDFSIKRDDSMWRP 579
             Q++P+  PDGQ  F++PN     + P       +S   +  N   P   S    DSMWRP
Sbjct:   222 QVVPA--PDGQFAFLIPNGAFAHSGPVIPVYTSNSGTSVGPNAVSPSSGSSLTSDSMWRP 279

Query:   580 W 580
             W
Sbjct:   280 W 280

 Score = 57 (25.1 bits), Expect = 1.4e-33, Sum P(3) = 1.4e-33
 Identities = 10/21 (47%), Positives = 16/21 (76%)

Query:   403 IDSGVRQRLFRHLENCMSEID 423
             +++ VR RL  HL NCM++I+
Sbjct:   131 VNTEVRTRLLGHLANCMTQIN 151


>UNIPROTKB|G3N2D5 [details] [associations]
            symbol:HES1 "Transcription factor HES-1" species:9913 "Bos
            taurus" [GO:2000974 "negative regulation of pro-B cell
            differentiation" evidence=IEA] [GO:2000737 "negative regulation of
            stem cell differentiation" evidence=IEA] [GO:2000227 "negative
            regulation of pancreatic A cell differentiation" evidence=IEA]
            [GO:0097150 "neuronal stem cell maintenance" evidence=IEA]
            [GO:0097084 "vascular smooth muscle cell development" evidence=IEA]
            [GO:0090102 "cochlea development" evidence=IEA] [GO:0072282
            "metanephric nephron tubule morphogenesis" evidence=IEA]
            [GO:0072141 "renal interstitial cell development" evidence=IEA]
            [GO:0072050 "S-shaped body morphogenesis" evidence=IEA] [GO:0072049
            "comma-shaped body morphogenesis" evidence=IEA] [GO:0072012
            "glomerulus vasculature development" evidence=IEA] [GO:0071820
            "N-box binding" evidence=IEA] [GO:0061309 "cardiac neural crest
            cell development involved in outflow tract morphogenesis"
            evidence=IEA] [GO:0061106 "negative regulation of stomach
            neuroendocrine cell differentiation" evidence=IEA] [GO:0061009
            "common bile duct development" evidence=IEA] [GO:0060716
            "labyrinthine layer blood vessel development" evidence=IEA]
            [GO:0060675 "ureteric bud morphogenesis" evidence=IEA] [GO:0060412
            "ventricular septum morphogenesis" evidence=IEA] [GO:0060253
            "negative regulation of glial cell proliferation" evidence=IEA]
            [GO:0060164 "regulation of timing of neuron differentiation"
            evidence=IEA] [GO:0060037 "pharyngeal system development"
            evidence=IEA] [GO:0048715 "negative regulation of oligodendrocyte
            differentiation" evidence=IEA] [GO:0048711 "positive regulation of
            astrocyte differentiation" evidence=IEA] [GO:0048667 "cell
            morphogenesis involved in neuron differentiation" evidence=IEA]
            [GO:0048538 "thymus development" evidence=IEA] [GO:0048469 "cell
            maturation" evidence=IEA] [GO:0046331 "lateral inhibition"
            evidence=IEA] [GO:0045977 "positive regulation of mitotic cell
            cycle, embryonic" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0045747 "positive regulation of Notch signaling pathway"
            evidence=IEA] [GO:0045608 "negative regulation of auditory receptor
            cell differentiation" evidence=IEA] [GO:0045598 "regulation of fat
            cell differentiation" evidence=IEA] [GO:0043388 "positive
            regulation of DNA binding" evidence=IEA] [GO:0042826 "histone
            deacetylase binding" evidence=IEA] [GO:0042803 "protein
            homodimerization activity" evidence=IEA] [GO:0042668 "auditory
            receptor cell fate determination" evidence=IEA] [GO:0042517
            "positive regulation of tyrosine phosphorylation of Stat3 protein"
            evidence=IEA] [GO:0042102 "positive regulation of T cell
            proliferation" evidence=IEA] [GO:0035910 "ascending aorta
            morphogenesis" evidence=IEA] [GO:0035019 "somatic stem cell
            maintenance" evidence=IEA] [GO:0031016 "pancreas development"
            evidence=IEA] [GO:0030901 "midbrain development" evidence=IEA]
            [GO:0030513 "positive regulation of BMP signaling pathway"
            evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
            [GO:0021984 "adenohypophysis development" evidence=IEA] [GO:0021575
            "hindbrain morphogenesis" evidence=IEA] [GO:0021558 "trochlear
            nerve development" evidence=IEA] [GO:0021557 "oculomotor nerve
            development" evidence=IEA] [GO:0021555 "midbrain-hindbrain boundary
            morphogenesis" evidence=IEA] [GO:0021537 "telencephalon
            development" evidence=IEA] [GO:0016477 "cell migration"
            evidence=IEA] [GO:0007262 "STAT protein import into nucleus"
            evidence=IEA] [GO:0007224 "smoothened signaling pathway"
            evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
            [GO:0007155 "cell adhesion" evidence=IEA] [GO:0006461 "protein
            complex assembly" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003266
            "regulation of secondary heart field cardioblast proliferation"
            evidence=IEA] [GO:0003143 "embryonic heart tube morphogenesis"
            evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
            [GO:0001078 "RNA polymerase II core promoter proximal region
            sequence-specific DNA binding transcription factor activity
            involved in negative regulation of transcription" evidence=IEA]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0005634
            GO:GO:0005737 GO:GO:0016477 GO:GO:0006461 GO:GO:0030324
            GO:GO:0001078 GO:GO:0001701 GO:GO:0045944 GO:GO:0007155
            GO:GO:0007219 GO:GO:0001889 GO:GO:0045747 GO:GO:0030901
            GO:GO:0030513 GO:GO:0060037 GO:GO:0042102 GO:GO:0097084
            GO:GO:0046331 GO:GO:0048538 GO:GO:0035019 Gene3D:4.10.280.10
            SUPFAM:SSF47459 GO:GO:0031016 GO:GO:0045598 GO:GO:0048844
            GO:GO:0072012 GO:GO:0003151 GO:GO:0007224 GO:GO:0042517
            GO:GO:0021984 GO:GO:0021575 GO:GO:0090102 GO:GO:0042668
            GO:GO:0048469 InterPro:IPR018352 SMART:SM00511 GO:GO:0048711
            GO:GO:0021537 GO:GO:0060675 GO:GO:0048715 GO:GO:0043388
            GO:GO:0003281 GO:GO:0003266 GO:GO:0045608 GO:GO:0097150
            GO:GO:0048667 GO:GO:0007262 GO:GO:0060253 GO:GO:0021555
            GeneTree:ENSGT00700000104168 GO:GO:0061309 GO:GO:0071820
            GO:GO:2000974 OMA:TKVYGGF GO:GO:0072049 GO:GO:0061009 GO:GO:0072282
            GO:GO:2000227 GO:GO:2000737 GO:GO:0061106 GO:GO:0021557
            GO:GO:0060164 GO:GO:0072141 GO:GO:0072050 GO:GO:0021558
            EMBL:DAAA02001738 Ensembl:ENSBTAT00000062965 Uniprot:G3N2D5
        Length = 304

 Score = 259 (96.2 bits), Expect = 2.2e-33, Sum P(4) = 2.2e-33
 Identities = 59/121 (48%), Positives = 85/121 (70%)

Query:   248 NKTLVVMSSPPLVASSNSIPPAL---KRANKPLMEKRRRARINQSLALLKALILDSAKTE 304
             N +  V ++P  V ++   P      ++++KP+MEKRRRARIN+SL+ LK LILD+ K +
Sbjct:     9 NSSSPVAATPASVNTTPDKPKTASEHRKSSKPIMEKRRRARINESLSQLKTLILDALKKD 68

Query:   305 NTKHSKLEKADILELTVRHL---QRQKI---LSSD--IRSKYKAGYEECSREVSRFLETP 356
             +++HSKLEKADILE+TV+HL   QR ++   LS+D  +  KY+AG+ EC  EV+RFL T 
Sbjct:    69 SSRHSKLEKADILEMTVKHLRNLQRAQMTAALSTDPSVLGKYRAGFSECMNEVTRFLSTC 128

Query:   357 E 357
             E
Sbjct:   129 E 129

 Score = 57 (25.1 bits), Expect = 2.2e-33, Sum P(4) = 2.2e-33
 Identities = 10/21 (47%), Positives = 16/21 (76%)

Query:   403 IDSGVRQRLFRHLENCMSEID 423
             +++ VR RL  HL NCM++I+
Sbjct:   131 VNTEVRTRLLGHLANCMTQIN 151

 Score = 52 (23.4 bits), Expect = 2.2e-33, Sum P(4) = 2.2e-33
 Identities = 9/18 (50%), Positives = 14/18 (77%)

Query:   521 QLIPSRLPDGQVVFILPN 538
             Q++P+  PDGQ  F++PN
Sbjct:   220 QVVPA--PDGQFAFLIPN 235

 Score = 42 (19.8 bits), Expect = 2.2e-33, Sum P(4) = 2.2e-33
 Identities = 16/48 (33%), Positives = 23/48 (47%)

Query:   537 PNYMAPSTSPPCK-DDLKSS--PPPLSNLDQPLDFSIKRDDSMWRP-W 580
             PN ++PS+ P    D + SS     L   ++       R+ SMWRP W
Sbjct:   258 PNAVSPSSGPSLTADSIISSFWEVYLRKYNKISVLGSNRE-SMWRPSW 304


>RGD|62081 [details] [associations]
            symbol:Hes1 "hairy and enhancer of split 1 (Drosophila)"
           species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
           of transcription from RNA polymerase II promoter"
           evidence=ISO;IDA;IMP] [GO:0000981 "sequence-specific DNA binding RNA
           polymerase II transcription factor activity" evidence=ISO]
           [GO:0001078 "RNA polymerase II core promoter proximal region
           sequence-specific DNA binding transcription factor activity involved
           in negative regulation of transcription" evidence=ISO;ISS]
           [GO:0001701 "in utero embryonic development" evidence=ISO]
           [GO:0001889 "liver development" evidence=ISO] [GO:0003143 "embryonic
           heart tube morphogenesis" evidence=ISO] [GO:0003151 "outflow tract
           morphogenesis" evidence=ISO] [GO:0003266 "regulation of secondary
           heart field cardioblast proliferation" evidence=ISO] [GO:0003281
           "ventricular septum development" evidence=ISO] [GO:0003677 "DNA
           binding" evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA
           binding transcription factor activity" evidence=ISO] [GO:0005515
           "protein binding" evidence=IPI] [GO:0005622 "intracellular"
           evidence=ISO] [GO:0005634 "nucleus" evidence=IEA;ISO;ISS]
           [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005737 "cytoplasm"
           evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
           evidence=IEA] [GO:0006355 "regulation of transcription,
           DNA-dependent" evidence=IEA] [GO:0006357 "regulation of
           transcription from RNA polymerase II promoter" evidence=ISO]
           [GO:0006461 "protein complex assembly" evidence=ISO;ISS] [GO:0007155
           "cell adhesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
           evidence=ISO] [GO:0007224 "smoothened signaling pathway"
           evidence=ISO] [GO:0007262 "STAT protein import into nucleus"
           evidence=ISO;ISS] [GO:0007389 "pattern specification process"
           evidence=ISO] [GO:0008284 "positive regulation of cell
           proliferation" evidence=ISO] [GO:0016477 "cell migration"
           evidence=ISO] [GO:0021537 "telencephalon development" evidence=ISO]
           [GO:0021555 "midbrain-hindbrain boundary morphogenesis"
           evidence=ISO] [GO:0021557 "oculomotor nerve development"
           evidence=ISO] [GO:0021558 "trochlear nerve development"
           evidence=ISO] [GO:0021575 "hindbrain morphogenesis" evidence=ISO]
           [GO:0021861 "forebrain radial glial cell differentiation"
           evidence=IDA] [GO:0021915 "neural tube development" evidence=ISO]
           [GO:0021983 "pituitary gland development" evidence=ISO] [GO:0021984
           "adenohypophysis development" evidence=ISO] [GO:0030324 "lung
           development" evidence=ISO] [GO:0030513 "positive regulation of BMP
           signaling pathway" evidence=ISO] [GO:0030901 "midbrain development"
           evidence=ISO] [GO:0031016 "pancreas development" evidence=ISO]
           [GO:0035019 "somatic stem cell maintenance" evidence=ISO]
           [GO:0035909 "aorta morphogenesis" evidence=ISO] [GO:0035910
           "ascending aorta morphogenesis" evidence=ISO] [GO:0042102 "positive
           regulation of T cell proliferation" evidence=ISO] [GO:0042491
           "auditory receptor cell differentiation" evidence=ISO] [GO:0042517
           "positive regulation of tyrosine phosphorylation of Stat3 protein"
           evidence=ISO;ISS] [GO:0042668 "auditory receptor cell fate
           determination" evidence=ISO] [GO:0042803 "protein homodimerization
           activity" evidence=ISO;ISS] [GO:0042826 "histone deacetylase
           binding" evidence=ISO] [GO:0043388 "positive regulation of DNA
           binding" evidence=ISO;ISS] [GO:0043565 "sequence-specific DNA
           binding" evidence=IDA] [GO:0045165 "cell fate commitment"
           evidence=ISO] [GO:0045596 "negative regulation of cell
           differentiation" evidence=ISO] [GO:0045598 "regulation of fat cell
           differentiation" evidence=ISO] [GO:0045608 "negative regulation of
           auditory receptor cell differentiation" evidence=ISO] [GO:0045665
           "negative regulation of neuron differentiation" evidence=ISO]
           [GO:0045747 "positive regulation of Notch signaling pathway"
           evidence=ISO] [GO:0045892 "negative regulation of transcription,
           DNA-dependent" evidence=ISO;IDA] [GO:0045893 "positive regulation of
           transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
           regulation of transcription from RNA polymerase II promoter"
           evidence=ISO] [GO:0045977 "positive regulation of mitotic cell
           cycle, embryonic" evidence=ISO] [GO:0046331 "lateral inhibition"
           evidence=ISO] [GO:0046427 "positive regulation of JAK-STAT cascade"
           evidence=ISO;ISS] [GO:0046983 "protein dimerization activity"
           evidence=IEA] [GO:0048469 "cell maturation" evidence=ISO]
           [GO:0048505 "regulation of timing of cell differentiation"
           evidence=ISO] [GO:0048538 "thymus development" evidence=ISO]
           [GO:0048667 "cell morphogenesis involved in neuron differentiation"
           evidence=ISO] [GO:0048711 "positive regulation of astrocyte
           differentiation" evidence=ISO;ISS] [GO:0048715 "negative regulation
           of oligodendrocyte differentiation" evidence=ISO;ISS] [GO:0048844
           "artery morphogenesis" evidence=ISO] [GO:0050767 "regulation of
           neurogenesis" evidence=ISO] [GO:0060037 "pharyngeal system
           development" evidence=ISO] [GO:0060164 "regulation of timing of
           neuron differentiation" evidence=ISO] [GO:0060253 "negative
           regulation of glial cell proliferation" evidence=ISO;ISS]
           [GO:0060412 "ventricular septum morphogenesis" evidence=ISO]
           [GO:0060716 "labyrinthine layer blood vessel development"
           evidence=ISO] [GO:0061009 "common bile duct development"
           evidence=ISO] [GO:0061106 "negative regulation of stomach
           neuroendocrine cell differentiation" evidence=ISO] [GO:0061309
           "cardiac neural crest cell development involved in outflow tract
           morphogenesis" evidence=ISO] [GO:0071820 "N-box binding"
           evidence=ISO;ISS] [GO:0090102 "cochlea development" evidence=ISO]
           [GO:0097084 "vascular smooth muscle cell development" evidence=ISO]
           [GO:0097150 "neuronal stem cell maintenance" evidence=ISO;IDA]
           [GO:2000227 "negative regulation of pancreatic A cell
           differentiation" evidence=ISO] [GO:2000737 "negative regulation of
           stem cell differentiation" evidence=ISO] [GO:2000974 "negative
           regulation of pro-B cell differentiation" evidence=ISO;ISS]
           [GO:2000978 "negative regulation of forebrain neuron
           differentiation" evidence=IDA] [GO:2000981 "negative regulation of
           inner ear receptor cell differentiation" evidence=ISO]
           InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
           PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 RGD:62081
           GO:GO:0042803 GO:GO:0005654 GO:GO:0006461 GO:GO:0001078
           GO:GO:0043565 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0042517
           InterPro:IPR018352 SMART:SM00511 GO:GO:0048711 GO:GO:0048715
           GO:GO:0043388 GO:GO:0097150 eggNOG:NOG319418 GO:GO:0007262
           GO:GO:0060253 GO:GO:0021861 KO:K06054 CTD:3280 HOVERGEN:HBG005960
           GO:GO:0071820 GO:GO:2000978 GO:GO:2000974 EMBL:D13417 EMBL:L04527
           EMBL:BC061730 IPI:IPI00188114 PIR:S36748 RefSeq:NP_077336.3
           UniGene:Rn.19727 ProteinModelPortal:Q04666 STRING:Q04666
           PhosphoSite:Q04666 GeneID:29577 KEGG:rno:29577 UCSC:RGD:62081
           NextBio:609674 Genevestigator:Q04666 Uniprot:Q04666
        Length = 281

 Score = 259 (96.2 bits), Expect = 2.3e-33, Sum P(3) = 2.3e-33
 Identities = 59/121 (48%), Positives = 85/121 (70%)

Query:   248 NKTLVVMSSPPLVASSNSIPPAL---KRANKPLMEKRRRARINQSLALLKALILDSAKTE 304
             N +  V ++P  V ++   P      ++++KP+MEKRRRARIN+SL+ LK LILD+ K +
Sbjct:     9 NSSSPVAATPASVNTTPDKPKTASEHRKSSKPIMEKRRRARINESLSQLKTLILDALKKD 68

Query:   305 NTKHSKLEKADILELTVRHL---QRQKI---LSSD--IRSKYKAGYEECSREVSRFLETP 356
             +++HSKLEKADILE+TV+HL   QR ++   LS+D  +  KY+AG+ EC  EV+RFL T 
Sbjct:    69 SSRHSKLEKADILEMTVKHLRNLQRAQMTAALSTDPSVLGKYRAGFSECMNEVTRFLSTC 128

Query:   357 E 357
             E
Sbjct:   129 E 129

 Score = 84 (34.6 bits), Expect = 2.3e-33, Sum P(3) = 2.3e-33
 Identities = 21/61 (34%), Positives = 29/61 (47%)

Query:   521 QLIPSRLPDGQVVFILPNYMAPSTSPPCKDDLKSSPPPLS-NLDQPLDFSIKRDDSMWRP 579
             Q++P+  PDGQ  F++PN     + P       +S   +  N   P   S    DSMWRP
Sbjct:   221 QVVPA--PDGQFAFLIPNGAFAHSGPVIPVYTSNSGTSVGPNAVSPSSGSSLTADSMWRP 278

Query:   580 W 580
             W
Sbjct:   279 W 279

 Score = 57 (25.1 bits), Expect = 2.3e-33, Sum P(3) = 2.3e-33
 Identities = 10/21 (47%), Positives = 16/21 (76%)

Query:   403 IDSGVRQRLFRHLENCMSEID 423
             +++ VR RL  HL NCM++I+
Sbjct:   131 VNTEVRTRLLGHLANCMTQIN 151


>UNIPROTKB|Q90Z12 [details] [associations]
            symbol:hes4-a "Transcription factor HES-4-A" species:8355
            "Xenopus laevis" [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IMP] [GO:0002088 "lens
            development in camera-type eye" evidence=IMP] [GO:0005634 "nucleus"
            evidence=ISS] [GO:0008283 "cell proliferation" evidence=IMP]
            [GO:0014029 "neural crest formation" evidence=IMP] [GO:0021501
            "prechordal plate formation" evidence=IMP] [GO:0030509 "BMP
            signaling pathway" evidence=IMP] [GO:0033504 "floor plate
            development" evidence=IMP] [GO:0043066 "negative regulation of
            apoptotic process" evidence=IMP] [GO:0043425 "bHLH transcription
            factor binding" evidence=IPI] [GO:0043565 "sequence-specific DNA
            binding" evidence=IDA] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=IMP] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 GO:GO:0005634 GO:GO:0043066
            GO:GO:0008283 GO:GO:0043565 GO:GO:0006351 GO:GO:0000122
            GO:GO:0030509 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR018352
            SMART:SM00511 GO:GO:0002088 GO:GO:0033504 GO:GO:0021501
            GO:GO:0014029 KO:K06054 EMBL:AF383159 EMBL:AF139914 EMBL:BC071075
            EMBL:AF022798 RefSeq:NP_001082574.1 UniGene:Xl.25977 GeneID:398579
            KEGG:xla:398579 CTD:398579 Xenbase:XB-GENE-6256031 Uniprot:Q90Z12
        Length = 281

 Score = 263 (97.6 bits), Expect = 2.8e-33, Sum P(4) = 2.8e-33
 Identities = 63/136 (46%), Positives = 88/136 (64%)

Query:   230 PRSTVKKDTHSPPLKRSLNKTLVVMSSPPLVASSNSIPPALKRANKPLMEKRRRARINQS 289
             P  T++K T SP      N         P  AS +      ++++KP+MEKRRRARIN+S
Sbjct:     2 PADTMEKPTASPIAGAPANSAQT--PDKPKSASEH------RKSSKPIMEKRRRARINES 53

Query:   290 LALLKALILDSAKTENTKHSKLEKADILELTVRHLQR-QKI-----LSSD--IRSKYKAG 341
             L  LK LILD+ K ++++HSKLEKADILE+TV+HL+  Q++     L+SD  +  KY+AG
Sbjct:    54 LGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQRVQMTAALTSDPSVLGKYRAG 113

Query:   342 YEECSREVSRFLETPE 357
             + EC+ EV+RFL T E
Sbjct:   114 FNECTNEVTRFLSTCE 129

 Score = 50 (22.7 bits), Expect = 2.8e-33, Sum P(4) = 2.8e-33
 Identities = 12/26 (46%), Positives = 18/26 (69%)

Query:   521 QLIPSRLPDGQVVFILPNYMAPSTSP 546
             QL+P+   DGQ  F++PN  A ++SP
Sbjct:   199 QLVPAT--DGQFAFLIPN-PAYTSSP 221

 Score = 48 (22.0 bits), Expect = 2.8e-33, Sum P(4) = 2.8e-33
 Identities = 8/20 (40%), Positives = 14/20 (70%)

Query:   403 IDSGVRQRLFRHLENCMSEI 422
             +++ VR RL  HL +C+ +I
Sbjct:   131 VNTEVRTRLLGHLSSCLGQI 150

 Score = 47 (21.6 bits), Expect = 2.8e-33, Sum P(4) = 2.8e-33
 Identities = 10/26 (38%), Positives = 14/26 (53%)

Query:   557 PPLSNLDQPLDFSIKRD--DSMWRPW 580
             P ++    PL  S   D  +S+WRPW
Sbjct:   256 PHMAQAVSPLGGSTGADSAESVWRPW 281


>UNIPROTKB|Q3ZBG4 [details] [associations]
            symbol:HES1 "Transcription factor HES-1" species:9913 "Bos
            taurus" [GO:0021861 "forebrain radial glial cell differentiation"
            evidence=ISS] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0043565 "sequence-specific DNA binding" evidence=ISS]
            [GO:2000978 "negative regulation of forebrain neuron
            differentiation" evidence=ISS] [GO:0046427 "positive regulation of
            JAK-STAT cascade" evidence=ISS] [GO:0043388 "positive regulation of
            DNA binding" evidence=ISS] [GO:0007262 "STAT protein import into
            nucleus" evidence=ISS] [GO:0071820 "N-box binding" evidence=ISS]
            [GO:0001078 "RNA polymerase II core promoter proximal region
            sequence-specific DNA binding transcription factor activity
            involved in negative regulation of transcription" evidence=ISS]
            [GO:0042517 "positive regulation of tyrosine phosphorylation of
            Stat3 protein" evidence=ISS] [GO:0006461 "protein complex assembly"
            evidence=ISS] [GO:0042803 "protein homodimerization activity"
            evidence=ISS] [GO:2000974 "negative regulation of pro-B cell
            differentiation" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
            [GO:0060253 "negative regulation of glial cell proliferation"
            evidence=ISS] [GO:0048715 "negative regulation of oligodendrocyte
            differentiation" evidence=ISS] [GO:0048711 "positive regulation of
            astrocyte differentiation" evidence=ISS] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 GO:GO:0005634 GO:GO:0042803
            GO:GO:0006461 GO:GO:0001078 GO:GO:0043565 Gene3D:4.10.280.10
            SUPFAM:SSF47459 GO:GO:0042517 InterPro:IPR018352 SMART:SM00511
            GO:GO:0048711 GO:GO:0048715 GO:GO:0043388 eggNOG:NOG319418
            GO:GO:0007262 GO:GO:0060253 GO:GO:0021861
            GeneTree:ENSGT00700000104168 KO:K06054 EMBL:BC103309
            IPI:IPI00694289 RefSeq:NP_001029850.1 UniGene:Bt.49417
            ProteinModelPortal:Q3ZBG4 STRING:Q3ZBG4 PRIDE:Q3ZBG4
            Ensembl:ENSBTAT00000000742 GeneID:539547 KEGG:bta:539547 CTD:3280
            HOGENOM:HOG000236346 HOVERGEN:HBG005960 InParanoid:Q3ZBG4
            OrthoDB:EOG4TTGK6 NextBio:20878064 GO:GO:0071820 GO:GO:2000978
            GO:GO:2000974 Uniprot:Q3ZBG4
        Length = 280

 Score = 259 (96.2 bits), Expect = 7.7e-33, Sum P(3) = 7.7e-33
 Identities = 59/121 (48%), Positives = 85/121 (70%)

Query:   248 NKTLVVMSSPPLVASSNSIPPAL---KRANKPLMEKRRRARINQSLALLKALILDSAKTE 304
             N +  V ++P  V ++   P      ++++KP+MEKRRRARIN+SL+ LK LILD+ K +
Sbjct:     9 NSSSPVAATPASVNTTPDKPKTASEHRKSSKPIMEKRRRARINESLSQLKTLILDALKKD 68

Query:   305 NTKHSKLEKADILELTVRHL---QRQKI---LSSD--IRSKYKAGYEECSREVSRFLETP 356
             +++HSKLEKADILE+TV+HL   QR ++   LS+D  +  KY+AG+ EC  EV+RFL T 
Sbjct:    69 SSRHSKLEKADILEMTVKHLRNLQRAQMTAALSTDPSVLGKYRAGFSECMNEVTRFLSTC 128

Query:   357 E 357
             E
Sbjct:   129 E 129

 Score = 79 (32.9 bits), Expect = 7.7e-33, Sum P(3) = 7.7e-33
 Identities = 20/61 (32%), Positives = 28/61 (45%)

Query:   521 QLIPSRLPDGQVVFILPNYMAPSTSPPCKDDLKSSPPPLS-NLDQPLDFSIKRDDSMWRP 579
             Q++P+  PDGQ  F++PN     + P       +S   +  N   P        DSMWRP
Sbjct:   220 QVVPA--PDGQFAFLIPNGAFAHSGPVIPVYTSNSGTSVGPNAVSPSSGPSLTADSMWRP 277

Query:   580 W 580
             W
Sbjct:   278 W 278

 Score = 57 (25.1 bits), Expect = 7.7e-33, Sum P(3) = 7.7e-33
 Identities = 10/21 (47%), Positives = 16/21 (76%)

Query:   403 IDSGVRQRLFRHLENCMSEID 423
             +++ VR RL  HL NCM++I+
Sbjct:   131 VNTEVRTRLLGHLANCMTQIN 151


>UNIPROTKB|Q14469 [details] [associations]
            symbol:HES1 "Transcription factor HES-1" species:9606 "Homo
            sapiens" [GO:0001889 "liver development" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA]
            [GO:0007224 "smoothened signaling pathway" evidence=IEA]
            [GO:0016477 "cell migration" evidence=IEA] [GO:0021537
            "telencephalon development" evidence=IEA] [GO:0021555
            "midbrain-hindbrain boundary morphogenesis" evidence=IEA]
            [GO:0021557 "oculomotor nerve development" evidence=IEA]
            [GO:0021558 "trochlear nerve development" evidence=IEA] [GO:0021575
            "hindbrain morphogenesis" evidence=IEA] [GO:0021984
            "adenohypophysis development" evidence=IEA] [GO:0030324 "lung
            development" evidence=IEA] [GO:0030513 "positive regulation of BMP
            signaling pathway" evidence=IEA] [GO:0030901 "midbrain development"
            evidence=IEA] [GO:0035019 "somatic stem cell maintenance"
            evidence=IEA] [GO:0042102 "positive regulation of T cell
            proliferation" evidence=IEA] [GO:0042668 "auditory receptor cell
            fate determination" evidence=IEA] [GO:0045598 "regulation of fat
            cell differentiation" evidence=IEA] [GO:0045608 "negative
            regulation of auditory receptor cell differentiation" evidence=IEA]
            [GO:0045747 "positive regulation of Notch signaling pathway"
            evidence=IEA] [GO:0046331 "lateral inhibition" evidence=IEA]
            [GO:0048469 "cell maturation" evidence=IEA] [GO:0048667 "cell
            morphogenesis involved in neuron differentiation" evidence=IEA]
            [GO:0060164 "regulation of timing of neuron differentiation"
            evidence=IEA] [GO:0060675 "ureteric bud morphogenesis"
            evidence=IEA] [GO:0060716 "labyrinthine layer blood vessel
            development" evidence=IEA] [GO:0061009 "common bile duct
            development" evidence=IEA] [GO:0061106 "negative regulation of
            stomach neuroendocrine cell differentiation" evidence=IEA]
            [GO:0072012 "glomerulus vasculature development" evidence=IEA]
            [GO:0072049 "comma-shaped body morphogenesis" evidence=IEA]
            [GO:0072050 "S-shaped body morphogenesis" evidence=IEA] [GO:0072141
            "renal interstitial cell development" evidence=IEA] [GO:0072282
            "metanephric nephron tubule morphogenesis" evidence=IEA]
            [GO:0090102 "cochlea development" evidence=IEA] [GO:2000227
            "negative regulation of pancreatic A cell differentiation"
            evidence=IEA] [GO:0007219 "Notch signaling pathway"
            evidence=IMP;IDA;TAS] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IDA] [GO:0048711 "positive
            regulation of astrocyte differentiation" evidence=ISS] [GO:0048715
            "negative regulation of oligodendrocyte differentiation"
            evidence=ISS] [GO:0060253 "negative regulation of glial cell
            proliferation" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
            [GO:2000974 "negative regulation of pro-B cell differentiation"
            evidence=IMP] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IDA] [GO:0042803 "protein
            homodimerization activity" evidence=ISS] [GO:0006461 "protein
            complex assembly" evidence=ISS] [GO:0042517 "positive regulation of
            tyrosine phosphorylation of Stat3 protein" evidence=ISS]
            [GO:0001078 "RNA polymerase II core promoter proximal region
            sequence-specific DNA binding transcription factor activity
            involved in negative regulation of transcription" evidence=ISS]
            [GO:0071820 "N-box binding" evidence=ISS] [GO:0007262 "STAT protein
            import into nucleus" evidence=ISS] [GO:0043388 "positive regulation
            of DNA binding" evidence=ISS] [GO:0046427 "positive regulation of
            JAK-STAT cascade" evidence=ISS] [GO:2000978 "negative regulation of
            forebrain neuron differentiation" evidence=ISS] [GO:0043565
            "sequence-specific DNA binding" evidence=ISS] [GO:0021861
            "forebrain radial glial cell differentiation" evidence=ISS]
            [GO:0097150 "neuronal stem cell maintenance" evidence=IEP]
            [GO:2000737 "negative regulation of stem cell differentiation"
            evidence=IMP] [GO:0008134 "transcription factor binding"
            evidence=NAS] [GO:0003677 "DNA binding" evidence=TAS] [GO:0007399
            "nervous system development" evidence=TAS] [GO:0031018 "endocrine
            pancreas development" evidence=TAS] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0042826 "histone deacetylase binding"
            evidence=IPI] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=IDA] [GO:0003143 "embryonic heart tube
            morphogenesis" evidence=ISS] [GO:0035910 "ascending aorta
            morphogenesis" evidence=ISS] [GO:0045977 "positive regulation of
            mitotic cell cycle, embryonic" evidence=ISS] [GO:0060412
            "ventricular septum morphogenesis" evidence=ISS] [GO:0003266
            "regulation of secondary heart field cardioblast proliferation"
            evidence=ISS] [GO:0061309 "cardiac neural crest cell development
            involved in outflow tract morphogenesis" evidence=ISS] [GO:0003151
            "outflow tract morphogenesis" evidence=ISS] [GO:0003281
            "ventricular septum development" evidence=ISS] [GO:0008284
            "positive regulation of cell proliferation" evidence=ISS]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=ISS] [GO:0048538 "thymus
            development" evidence=ISS] [GO:0048844 "artery morphogenesis"
            evidence=ISS] [GO:0060037 "pharyngeal system development"
            evidence=ISS] [GO:0097084 "vascular smooth muscle cell development"
            evidence=ISS] InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010
            Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353
            GO:GO:0005634 GO:GO:0005737 Reactome:REACT_111045
            Reactome:REACT_111102 GO:GO:0042803 GO:GO:0016477 GO:GO:0006461
            GO:GO:0030324 GO:GO:0008284 GO:GO:0001078 GO:GO:0043565
            GO:GO:0001701 GO:GO:0045944 GO:GO:0007155 GO:GO:0007219
            GO:GO:0001889 GO:GO:0045747 GO:GO:0030901 GO:GO:0030513
            GO:GO:0003143 GO:GO:0060037 GO:GO:0042102 GO:GO:0097084
            GO:GO:0046331 GO:GO:0048538 GO:GO:0035019 Gene3D:4.10.280.10
            SUPFAM:SSF47459 GO:GO:0008134 GO:GO:0031018 GO:GO:0045598
            GO:GO:0072012 GO:GO:0003151 GO:GO:0007224 GO:GO:0042517
            GO:GO:0021984 GO:GO:0021575 GO:GO:0090102 GO:GO:0042668
            GO:GO:0048469 InterPro:IPR018352 SMART:SM00511 GO:GO:0048711
            GO:GO:0021537 GO:GO:0060675 GO:GO:0048715 GO:GO:0043388
            GO:GO:0060412 GO:GO:0003266 GO:GO:0045608 GO:GO:0097150
            eggNOG:NOG319418 GO:GO:0048667 GO:GO:0007262 CleanEx:HS_HES1
            GO:GO:0060253 GO:GO:0021555 GO:GO:0021861 GO:GO:0061309 KO:K06054
            CTD:3280 HOGENOM:HOG000236346 HOVERGEN:HBG005960 OrthoDB:EOG4TTGK6
            GO:GO:0071820 GO:GO:2000978 GO:GO:2000974 EMBL:L19314 EMBL:AF264785
            EMBL:AK000415 EMBL:CR541843 IPI:IPI00030964 PIR:A53027
            RefSeq:NP_005515.1 UniGene:Hs.250666 ProteinModelPortal:Q14469
            SMR:Q14469 IntAct:Q14469 STRING:Q14469 PhosphoSite:Q14469
            DMDM:3913825 PRIDE:Q14469 DNASU:3280 Ensembl:ENST00000232424
            GeneID:3280 KEGG:hsa:3280 UCSC:uc003ftq.2 GeneCards:GC03P193853
            HGNC:HGNC:5192 MIM:139605 neXtProt:NX_Q14469 PharmGKB:PA29465
            InParanoid:Q14469 OMA:TKVYGGF PhylomeDB:Q14469 GenomeRNAi:3280
            NextBio:13023 ArrayExpress:Q14469 Bgee:Q14469 Genevestigator:Q14469
            GermOnline:ENSG00000114315 GO:GO:0035910 GO:GO:0072049
            GO:GO:0061009 GO:GO:0072282 GO:GO:2000227 GO:GO:2000737
            GO:GO:0061106 GO:GO:0021557 GO:GO:0045977 GO:GO:0060164
            GO:GO:0072141 GO:GO:0072050 GO:GO:0021558 Uniprot:Q14469
        Length = 280

 Score = 259 (96.2 bits), Expect = 7.7e-33, Sum P(3) = 7.7e-33
 Identities = 59/121 (48%), Positives = 85/121 (70%)

Query:   248 NKTLVVMSSPPLVASSNSIPPAL---KRANKPLMEKRRRARINQSLALLKALILDSAKTE 304
             N +  V ++P  V ++   P      ++++KP+MEKRRRARIN+SL+ LK LILD+ K +
Sbjct:     9 NSSSPVAATPASVNTTPDKPKTASEHRKSSKPIMEKRRRARINESLSQLKTLILDALKKD 68

Query:   305 NTKHSKLEKADILELTVRHL---QRQKI---LSSD--IRSKYKAGYEECSREVSRFLETP 356
             +++HSKLEKADILE+TV+HL   QR ++   LS+D  +  KY+AG+ EC  EV+RFL T 
Sbjct:    69 SSRHSKLEKADILEMTVKHLRNLQRAQMTAALSTDPSVLGKYRAGFSECMNEVTRFLSTC 128

Query:   357 E 357
             E
Sbjct:   129 E 129

 Score = 79 (32.9 bits), Expect = 7.7e-33, Sum P(3) = 7.7e-33
 Identities = 20/61 (32%), Positives = 28/61 (45%)

Query:   521 QLIPSRLPDGQVVFILPNYMAPSTSPPCKDDLKSSPPPLS-NLDQPLDFSIKRDDSMWRP 579
             Q++P+  PDGQ  F++PN     + P       +S   +  N   P        DSMWRP
Sbjct:   220 QVVPA--PDGQFAFLIPNGAFAHSGPVIPVYTSNSGTSVGPNAVSPSSGPSLTADSMWRP 277

Query:   580 W 580
             W
Sbjct:   278 W 278

 Score = 57 (25.1 bits), Expect = 7.7e-33, Sum P(3) = 7.7e-33
 Identities = 10/21 (47%), Positives = 16/21 (76%)

Query:   403 IDSGVRQRLFRHLENCMSEID 423
             +++ VR RL  HL NCM++I+
Sbjct:   131 VNTEVRTRLLGHLANCMTQIN 151


>UNIPROTKB|I3LM61 [details] [associations]
            symbol:HES1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:2000974 "negative regulation of pro-B cell
            differentiation" evidence=IEA] [GO:2000737 "negative regulation of
            stem cell differentiation" evidence=IEA] [GO:2000227 "negative
            regulation of pancreatic A cell differentiation" evidence=IEA]
            [GO:0097150 "neuronal stem cell maintenance" evidence=IEA]
            [GO:0097084 "vascular smooth muscle cell development" evidence=IEA]
            [GO:0090102 "cochlea development" evidence=IEA] [GO:0072282
            "metanephric nephron tubule morphogenesis" evidence=IEA]
            [GO:0072141 "renal interstitial cell development" evidence=IEA]
            [GO:0072050 "S-shaped body morphogenesis" evidence=IEA] [GO:0072049
            "comma-shaped body morphogenesis" evidence=IEA] [GO:0072012
            "glomerulus vasculature development" evidence=IEA] [GO:0071820
            "N-box binding" evidence=IEA] [GO:0061309 "cardiac neural crest
            cell development involved in outflow tract morphogenesis"
            evidence=IEA] [GO:0061106 "negative regulation of stomach
            neuroendocrine cell differentiation" evidence=IEA] [GO:0061009
            "common bile duct development" evidence=IEA] [GO:0060716
            "labyrinthine layer blood vessel development" evidence=IEA]
            [GO:0060675 "ureteric bud morphogenesis" evidence=IEA] [GO:0060412
            "ventricular septum morphogenesis" evidence=IEA] [GO:0060253
            "negative regulation of glial cell proliferation" evidence=IEA]
            [GO:0060164 "regulation of timing of neuron differentiation"
            evidence=IEA] [GO:0060037 "pharyngeal system development"
            evidence=IEA] [GO:0048715 "negative regulation of oligodendrocyte
            differentiation" evidence=IEA] [GO:0048711 "positive regulation of
            astrocyte differentiation" evidence=IEA] [GO:0048667 "cell
            morphogenesis involved in neuron differentiation" evidence=IEA]
            [GO:0048538 "thymus development" evidence=IEA] [GO:0048469 "cell
            maturation" evidence=IEA] [GO:0046331 "lateral inhibition"
            evidence=IEA] [GO:0045977 "positive regulation of mitotic cell
            cycle, embryonic" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0045747 "positive regulation of Notch signaling pathway"
            evidence=IEA] [GO:0045608 "negative regulation of auditory receptor
            cell differentiation" evidence=IEA] [GO:0045598 "regulation of fat
            cell differentiation" evidence=IEA] [GO:0043388 "positive
            regulation of DNA binding" evidence=IEA] [GO:0042826 "histone
            deacetylase binding" evidence=IEA] [GO:0042803 "protein
            homodimerization activity" evidence=IEA] [GO:0042668 "auditory
            receptor cell fate determination" evidence=IEA] [GO:0042517
            "positive regulation of tyrosine phosphorylation of Stat3 protein"
            evidence=IEA] [GO:0042102 "positive regulation of T cell
            proliferation" evidence=IEA] [GO:0035910 "ascending aorta
            morphogenesis" evidence=IEA] [GO:0035019 "somatic stem cell
            maintenance" evidence=IEA] [GO:0031016 "pancreas development"
            evidence=IEA] [GO:0030901 "midbrain development" evidence=IEA]
            [GO:0030513 "positive regulation of BMP signaling pathway"
            evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
            [GO:0021984 "adenohypophysis development" evidence=IEA] [GO:0021575
            "hindbrain morphogenesis" evidence=IEA] [GO:0021558 "trochlear
            nerve development" evidence=IEA] [GO:0021557 "oculomotor nerve
            development" evidence=IEA] [GO:0021555 "midbrain-hindbrain boundary
            morphogenesis" evidence=IEA] [GO:0021537 "telencephalon
            development" evidence=IEA] [GO:0016477 "cell migration"
            evidence=IEA] [GO:0007262 "STAT protein import into nucleus"
            evidence=IEA] [GO:0007224 "smoothened signaling pathway"
            evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
            [GO:0007155 "cell adhesion" evidence=IEA] [GO:0006461 "protein
            complex assembly" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003266
            "regulation of secondary heart field cardioblast proliferation"
            evidence=IEA] [GO:0003143 "embryonic heart tube morphogenesis"
            evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
            [GO:0001078 "RNA polymerase II core promoter proximal region
            sequence-specific DNA binding transcription factor activity
            involved in negative regulation of transcription" evidence=IEA]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0005634
            GO:GO:0005737 GO:GO:0016477 GO:GO:0006461 GO:GO:0030324
            GO:GO:0001078 GO:GO:0001701 GO:GO:0045944 GO:GO:0007155
            GO:GO:0007219 GO:GO:0001889 GO:GO:0045747 GO:GO:0030901
            GO:GO:0030513 GO:GO:0060037 GO:GO:0042102 GO:GO:0097084
            GO:GO:0046331 GO:GO:0048538 GO:GO:0035019 Gene3D:4.10.280.10
            SUPFAM:SSF47459 GO:GO:0031016 GO:GO:0045598 GO:GO:0048844
            GO:GO:0072012 GO:GO:0003151 GO:GO:0007224 GO:GO:0042517
            GO:GO:0021984 GO:GO:0021575 GO:GO:0090102 GO:GO:0042668
            GO:GO:0048469 InterPro:IPR018352 SMART:SM00511 GO:GO:0048711
            GO:GO:0021537 GO:GO:0060675 GO:GO:0048715 GO:GO:0043388
            GO:GO:0003281 GO:GO:0003266 GO:GO:0045608 GO:GO:0097150
            GO:GO:0048667 GO:GO:0007262 GO:GO:0060253 GO:GO:0021555
            GeneTree:ENSGT00700000104168 GO:GO:0061309 GO:GO:0071820
            GO:GO:2000974 OMA:TKVYGGF GO:GO:0072049 GO:GO:0061009 GO:GO:0072282
            GO:GO:2000227 GO:GO:2000737 GO:GO:0061106 GO:GO:0021557
            GO:GO:0060164 GO:GO:0072141 GO:GO:0072050 GO:GO:0021558
            EMBL:FP565159 ProteinModelPortal:I3LM61 PRIDE:I3LM61
            Ensembl:ENSSSCT00000026743 Uniprot:I3LM61
        Length = 280

 Score = 259 (96.2 bits), Expect = 7.7e-33, Sum P(3) = 7.7e-33
 Identities = 59/121 (48%), Positives = 85/121 (70%)

Query:   248 NKTLVVMSSPPLVASSNSIPPAL---KRANKPLMEKRRRARINQSLALLKALILDSAKTE 304
             N +  V ++P  V ++   P      ++++KP+MEKRRRARIN+SL+ LK LILD+ K +
Sbjct:     9 NSSSPVAATPASVNTTPDKPKTASEHRKSSKPIMEKRRRARINESLSQLKTLILDALKKD 68

Query:   305 NTKHSKLEKADILELTVRHL---QRQKI---LSSD--IRSKYKAGYEECSREVSRFLETP 356
             +++HSKLEKADILE+TV+HL   QR ++   LS+D  +  KY+AG+ EC  EV+RFL T 
Sbjct:    69 SSRHSKLEKADILEMTVKHLRNLQRAQMTAALSTDPSVLGKYRAGFSECMNEVTRFLSTC 128

Query:   357 E 357
             E
Sbjct:   129 E 129

 Score = 79 (32.9 bits), Expect = 7.7e-33, Sum P(3) = 7.7e-33
 Identities = 20/61 (32%), Positives = 28/61 (45%)

Query:   521 QLIPSRLPDGQVVFILPNYMAPSTSPPCKDDLKSSPPPLS-NLDQPLDFSIKRDDSMWRP 579
             Q++P+  PDGQ  F++PN     + P       +S   +  N   P        DSMWRP
Sbjct:   220 QVVPA--PDGQFAFLIPNGAFAHSGPVIPVYTSNSGTSVGPNAVSPSSGPSLTADSMWRP 277

Query:   580 W 580
             W
Sbjct:   278 W 278

 Score = 57 (25.1 bits), Expect = 7.7e-33, Sum P(3) = 7.7e-33
 Identities = 10/21 (47%), Positives = 16/21 (76%)

Query:   403 IDSGVRQRLFRHLENCMSEID 423
             +++ VR RL  HL NCM++I+
Sbjct:   131 VNTEVRTRLLGHLANCMTQIN 151


>UNIPROTKB|Q6IRB2 [details] [associations]
            symbol:hes1-a "Transcription factor HES-1-A" species:8355
            "Xenopus laevis" [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IMP] [GO:0005634
            "nucleus" evidence=ISS] [GO:0007219 "Notch signaling pathway"
            evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
            evidence=IPI] [GO:0043565 "sequence-specific DNA binding"
            evidence=IDA] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=IMP] [GO:0046982 "protein
            heterodimerization activity" evidence=IPI] [GO:0048635 "negative
            regulation of muscle organ development" evidence=IMP]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0007275
            GO:GO:0005634 GO:GO:0043565 GO:GO:0007219 GO:GO:0006351
            GO:GO:0000122 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR018352
            SMART:SM00511 EMBL:U36194 EMBL:BC070988 RefSeq:NP_001081396.1
            UniGene:Xl.21817 ProteinModelPortal:Q6IRB2 GeneID:397813
            KEGG:xla:397813 CTD:397813 Xenbase:XB-GENE-865756 KO:K06054
            GO:GO:0048635 Uniprot:Q6IRB2
        Length = 267

 Score = 261 (96.9 bits), Expect = 3.0e-32, Sum P(3) = 3.0e-32
 Identities = 58/121 (47%), Positives = 85/121 (70%)

Query:   248 NKTLVVMSSPPLVASSNSIPPAL---KRANKPLMEKRRRARINQSLALLKALILDSAKTE 304
             N +  V ++P  V+++   P      ++++KP+MEKRRRARIN+SL  LK LILD+ K +
Sbjct:     9 NSSSPVAATPASVSNTPDKPKTASEHRKSSKPIMEKRRRARINESLGQLKTLILDALKKD 68

Query:   305 NTKHSKLEKADILELTVRHLQR-QKI-----LSSD--IRSKYKAGYEECSREVSRFLETP 356
             +++HSKLEKADILE+TV+HL+  Q++     LS+D  +  KY+AG+ EC  EV+RFL T 
Sbjct:    69 SSRHSKLEKADILEMTVKHLRNLQRVQMSAALSTDPSVLGKYRAGFSECMNEVTRFLSTC 128

Query:   357 E 357
             E
Sbjct:   129 E 129

 Score = 70 (29.7 bits), Expect = 3.0e-32, Sum P(3) = 3.0e-32
 Identities = 23/65 (35%), Positives = 32/65 (49%)

Query:   521 QLIPSRLPDGQVVFILPNYMAP---STSPPCKDDLKSS--PPPLSNLDQPLDFSIKRDDS 575
             QL+P+  PDGQ  F++ N   P   S  P   +    +  PP +S    P   +I   DS
Sbjct:   209 QLVPA--PDGQFAFLITNPAFPHNGSVIPVYTNSNVGTALPPSVSPSVMP-SVTI---DS 262

Query:   576 MWRPW 580
             +WRPW
Sbjct:   263 VWRPW 267

 Score = 58 (25.5 bits), Expect = 3.0e-32, Sum P(3) = 3.0e-32
 Identities = 10/21 (47%), Positives = 16/21 (76%)

Query:   403 IDSGVRQRLFRHLENCMSEID 423
             +++ VR RL  HL NCM++I+
Sbjct:   131 VNTDVRTRLLGHLANCMNQIN 151


>UNIPROTKB|Q5PPM5 [details] [associations]
            symbol:hes1 "Transcription factor HES-1" species:8364
            "Xenopus (Silurana) tropicalis" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISS] [GO:0007219 "Notch signaling
            pathway" evidence=ISS] [GO:0043425 "bHLH transcription factor
            binding" evidence=ISS] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=ISS] [GO:0046982 "protein
            heterodimerization activity" evidence=ISS] [GO:0048635 "negative
            regulation of muscle organ development" evidence=ISS]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0007275
            GO:GO:0005634 GO:GO:0003677 GO:GO:0007219 GO:GO:0006351
            GO:GO:0000122 GO:GO:0046982 Gene3D:4.10.280.10 SUPFAM:SSF47459
            InterPro:IPR018352 SMART:SM00511 GO:GO:0043425 eggNOG:NOG319418
            GeneTree:ENSGT00700000104168 KO:K06054 GO:GO:0048635 CTD:3280
            HOGENOM:HOG000236346 OrthoDB:EOG4TTGK6 EMBL:AC160833 EMBL:CR760467
            EMBL:BC087608 RefSeq:NP_001011194.1 UniGene:Str.10866
            ProteinModelPortal:Q5PPM5 STRING:Q5PPM5 Ensembl:ENSXETT00000036731
            GeneID:496617 KEGG:xtr:496617 Xenbase:XB-GENE-487995
            InParanoid:Q5PPM5 Bgee:Q5PPM5 Uniprot:Q5PPM5
        Length = 267

 Score = 258 (95.9 bits), Expect = 5.6e-32, Sum P(3) = 5.6e-32
 Identities = 57/121 (47%), Positives = 85/121 (70%)

Query:   248 NKTLVVMSSPPLVASSNSIPPAL---KRANKPLMEKRRRARINQSLALLKALILDSAKTE 304
             N +  V ++P  ++++   P      ++++KP+MEKRRRARIN+SL  LK LILD+ K +
Sbjct:     9 NSSSPVAATPASMSNTPDKPKTASEHRKSSKPIMEKRRRARINESLGQLKTLILDALKKD 68

Query:   305 NTKHSKLEKADILELTVRHLQR-QKI-----LSSD--IRSKYKAGYEECSREVSRFLETP 356
             +++HSKLEKADILE+TV+HL+  Q++     LS+D  +  KY+AG+ EC  EV+RFL T 
Sbjct:    69 SSRHSKLEKADILEMTVKHLRNLQRVQMTAALSTDPSVLGKYRAGFSECMNEVTRFLSTC 128

Query:   357 E 357
             E
Sbjct:   129 E 129

 Score = 71 (30.1 bits), Expect = 5.6e-32, Sum P(3) = 5.6e-32
 Identities = 23/65 (35%), Positives = 32/65 (49%)

Query:   521 QLIPSRLPDGQVVFILPNYMAP---STSPPCKDDLKSS--PPPLSNLDQPLDFSIKRDDS 575
             QL+P+  PDGQ  F++ N   P   S  P   +    +  PP +S    P   S+  D S
Sbjct:   209 QLVPA--PDGQFAFLITNPAFPHNGSVIPVYTNSNVGTALPPSVSPSVMP---SVTAD-S 262

Query:   576 MWRPW 580
             +WRPW
Sbjct:   263 VWRPW 267

 Score = 58 (25.5 bits), Expect = 5.6e-32, Sum P(3) = 5.6e-32
 Identities = 10/21 (47%), Positives = 16/21 (76%)

Query:   403 IDSGVRQRLFRHLENCMSEID 423
             +++ VR RL  HL NCM++I+
Sbjct:   131 VNTDVRTRLLGHLANCMNQIN 151


>UNIPROTKB|Q8AVU4 [details] [associations]
            symbol:hes1-b "Transcription factor HES-1-B" species:8355
            "Xenopus laevis" [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISS] [GO:0007219 "Notch signaling pathway"
            evidence=ISS] [GO:0043425 "bHLH transcription factor binding"
            evidence=ISS] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0046982 "protein
            heterodimerization activity" evidence=ISS] [GO:0048635 "negative
            regulation of muscle organ development" evidence=ISS]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0007275
            GO:GO:0005634 GO:GO:0003677 GO:GO:0007219 GO:GO:0006351
            GO:GO:0000122 GO:GO:0046982 Gene3D:4.10.280.10 SUPFAM:SSF47459
            InterPro:IPR018352 SMART:SM00511 GO:GO:0043425 KO:K06054
            GO:GO:0048635 EMBL:BC041261 EMBL:BC128932 RefSeq:NP_001079386.1
            UniGene:Xl.972 ProteinModelPortal:Q8AVU4 GeneID:379073
            KEGG:xla:379073 CTD:379073 Xenbase:XB-GENE-6256448 Uniprot:Q8AVU4
        Length = 267

 Score = 261 (96.9 bits), Expect = 6.7e-31, Sum P(3) = 6.7e-31
 Identities = 58/121 (47%), Positives = 85/121 (70%)

Query:   248 NKTLVVMSSPPLVASSNSIPPAL---KRANKPLMEKRRRARINQSLALLKALILDSAKTE 304
             N +  V ++P  V+++   P      ++++KP+MEKRRRARIN+SL  LK LILD+ K +
Sbjct:     9 NSSSPVAATPASVSNTPDKPKTASEHRKSSKPIMEKRRRARINESLGQLKTLILDALKKD 68

Query:   305 NTKHSKLEKADILELTVRHLQR-QKI-----LSSD--IRSKYKAGYEECSREVSRFLETP 356
             +++HSKLEKADILE+TV+HL+  Q++     LS+D  +  KY+AG+ EC  EV+RFL T 
Sbjct:    69 SSRHSKLEKADILEMTVKHLRNLQRVQMTAALSTDPSVLGKYRAGFSECMNEVTRFLSTC 128

Query:   357 E 357
             E
Sbjct:   129 E 129

 Score = 62 (26.9 bits), Expect = 6.7e-31, Sum P(3) = 6.7e-31
 Identities = 21/65 (32%), Positives = 30/65 (46%)

Query:   521 QLIPSRLPDGQVVFILPNYMAPSTSP--PCKDDLK---SSPPPLSNLDQPLDFSIKRDDS 575
             QL+P+   DGQ  F++ N   P      P   +     + PP +S    P   S+  D S
Sbjct:   209 QLVPAS--DGQFAFLITNPAFPQNGSVIPLYTNSNVGTALPPSVSPSVMP---SVTAD-S 262

Query:   576 MWRPW 580
             +WRPW
Sbjct:   263 VWRPW 267

 Score = 53 (23.7 bits), Expect = 6.7e-31, Sum P(3) = 6.7e-31
 Identities = 9/20 (45%), Positives = 15/20 (75%)

Query:   403 IDSGVRQRLFRHLENCMSEI 422
             +++ VR RL  HL NC+++I
Sbjct:   131 VNTDVRTRLLGHLANCVNQI 150


>ZFIN|ZDB-GENE-011213-1 [details] [associations]
            symbol:her9 "hairy-related 9" species:7955 "Danio
            rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0050768 "negative regulation of neurogenesis" evidence=IMP]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] InterPro:IPR003650 InterPro:IPR011598
            Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054
            SMART:SM00353 ZFIN:ZDB-GENE-011213-1 GO:GO:0005634 GO:GO:0006355
            GO:GO:0003677 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GO:GO:0050768 InterPro:IPR018352 SMART:SM00511
            GeneTree:ENSGT00700000104168 KO:K06054 HOVERGEN:HBG005960
            OMA:HTPDKPK EMBL:CR751236 EMBL:AF301264 EMBL:BC079516
            IPI:IPI00506831 RefSeq:NP_571948.1 UniGene:Dr.78757 STRING:Q9DF41
            Ensembl:ENSDART00000078936 GeneID:140613 KEGG:dre:140613 CTD:140613
            InParanoid:Q9DF41 NextBio:20797024 Uniprot:Q9DF41
        Length = 291

 Score = 259 (96.2 bits), Expect = 1.3e-29, Sum P(3) = 1.3e-29
 Identities = 54/95 (56%), Positives = 75/95 (78%)

Query:   271 KRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQR-QKI 329
             ++++KP+MEKRRRARIN+SL  LK LILD+ K ++++HSKLEKADILE+TV+HL+  Q++
Sbjct:    35 RKSSKPIMEKRRRARINESLGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQRV 94

Query:   330 -----LSSD--IRSKYKAGYEECSREVSRFLETPE 357
                  LS+D  + SKY+AG+ EC  EV+RFL T E
Sbjct:    95 QMSAALSADTNVLSKYRAGFNECMNEVTRFLSTCE 129

 Score = 53 (23.7 bits), Expect = 1.3e-29, Sum P(3) = 1.3e-29
 Identities = 12/27 (44%), Positives = 18/27 (66%)

Query:   521 QLIPSRLPDGQVVFILPN-YMAPSTSP 546
             QL+P+   DGQ  F++PN   A +T+P
Sbjct:   204 QLVPAT--DGQFAFLIPNPAFASATTP 228

 Score = 52 (23.4 bits), Expect = 1.3e-29, Sum P(3) = 1.3e-29
 Identities = 13/50 (26%), Positives = 26/50 (52%)

Query:   403 IDSGVRQRLFRHLENCMSEI-DLDFS--ASAEKLGITQDFSSEDDSAFPM 449
             +++ VR RL  HL  CM ++  +++   A A++  + Q    +  S  P+
Sbjct:   131 VNTEVRSRLLNHLSGCMGQMMAMNYPQPAPAQQAHLAQPLHVQLPSTLPI 180

 Score = 43 (20.2 bits), Expect = 1.4e-28, Sum P(3) = 1.4e-28
 Identities = 9/40 (22%), Positives = 18/40 (45%)

Query:   541 APSTSPPCKDDLKSSPPPLSNLDQPLDFSIKRDDSMWRPW 580
             AP+ + P +     S  P +     +    + ++ +WRPW
Sbjct:   252 APTVASPVQGMTSFSGVPQAVSPVGVSAGAESNEPVWRPW 291


>UNIPROTKB|E2R7Q8 [details] [associations]
            symbol:HES4 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 GO:GO:0005634 GO:GO:0006355
            GO:GO:0003677 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
            InterPro:IPR018352 SMART:SM00511 GeneTree:ENSGT00700000104168
            CTD:57801 KO:K09089 EMBL:AAEX03003836 EMBL:AAEX03003832
            EMBL:AAEX03003833 EMBL:AAEX03003834 EMBL:AAEX03003835
            RefSeq:XP_546724.1 Ensembl:ENSCAFT00000030751 GeneID:489604
            KEGG:cfa:489604 Uniprot:E2R7Q8
        Length = 225

 Score = 249 (92.7 bits), Expect = 2.0e-29, Sum P(4) = 2.0e-29
 Identities = 53/91 (58%), Positives = 73/91 (80%)

Query:   271 KRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQ---RQ 327
             ++++KP+MEKRRRARIN+SLA LK LILD+ + ++++HSKLEKADILE+TVRHLQ   R 
Sbjct:    35 RKSSKPVMEKRRRARINESLAQLKTLILDAFRKDSSRHSKLEKADILEMTVRHLQSLRRV 94

Query:   328 KI---LSSD--IRSKYKAGYEECSREVSRFL 353
             ++   LS+D  +  KY+AG+ EC  EV+RFL
Sbjct:    95 QVTAALSADPAVLGKYRAGFNECLAEVNRFL 125

 Score = 43 (20.2 bits), Expect = 2.0e-29, Sum P(4) = 2.0e-29
 Identities = 13/52 (25%), Positives = 19/52 (36%)

Query:   529 DGQVVFILPNYMAPSTSPPCKDDLKSSPPPLSNLDQPLDFSIKRDDSMWRPW 580
             DG    + P Y      PP    L  +PP +          ++   + WRPW
Sbjct:   181 DGPFPLLRPGYAFALRLPP---GLTGTPPTVPRA------GLQNRGAPWRPW 223

 Score = 41 (19.5 bits), Expect = 2.0e-29, Sum P(4) = 2.0e-29
 Identities = 7/20 (35%), Positives = 12/20 (60%)

Query:   403 IDSGVRQRLFRHLENCMSEI 422
             + + VR RL  HL  C+ ++
Sbjct:   131 VPAEVRSRLLGHLAACLGQL 150

 Score = 41 (19.5 bits), Expect = 2.0e-29, Sum P(4) = 2.0e-29
 Identities = 9/26 (34%), Positives = 13/26 (50%)

Query:   218 GTPDSSTGCQTKPRSTVKKDTHSPPL 243
             G P S++    KPRS  +    S P+
Sbjct:    16 GAPASASRTPNKPRSAAEHRKSSKPV 41


>UNIPROTKB|Q90VV1 [details] [associations]
            symbol:hes4-b "Transcription factor HES-4-B" species:8355
            "Xenopus laevis" [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IMP] [GO:0002088 "lens
            development in camera-type eye" evidence=IMP] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISS]
            [GO:0008283 "cell proliferation" evidence=IMP] [GO:0014029 "neural
            crest formation" evidence=IMP] [GO:0021501 "prechordal plate
            formation" evidence=IMP] [GO:0033504 "floor plate development"
            evidence=IMP] [GO:0043066 "negative regulation of apoptotic
            process" evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
            evidence=IPI] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=IMP] [GO:0046982 "protein
            heterodimerization activity" evidence=IPI] [GO:0048642 "negative
            regulation of skeletal muscle tissue development" evidence=IMP]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0005634
            GO:GO:0043066 GO:GO:0008283 GO:GO:0043565 GO:GO:0007219
            GO:GO:0006351 GO:GO:0000122 GO:GO:0007517 Gene3D:4.10.280.10
            SUPFAM:SSF47459 InterPro:IPR018352 SMART:SM00511 GO:GO:0002088
            GO:GO:0033504 GO:GO:0048642 GO:GO:0021501 GO:GO:0014029 KO:K06054
            EMBL:AF383160 EMBL:BC070547 EMBL:AF356000 RefSeq:NP_001082161.1
            UniGene:Xl.86822 ProteinModelPortal:Q90VV1 GeneID:398258
            KEGG:xla:398258 CTD:398258 Xenbase:XB-GENE-865740 Uniprot:Q90VV1
        Length = 277

 Score = 254 (94.5 bits), Expect = 8.5e-29, Sum P(3) = 8.5e-29
 Identities = 61/136 (44%), Positives = 87/136 (63%)

Query:   230 PRSTVKKDTHSPPLKRSLNKTLVVMSSPPLVASSNSIPPALKRANKPLMEKRRRARINQS 289
             P  +++K T SP      N         P  AS +      ++++KP+MEKRRRARIN+S
Sbjct:     2 PADSMEKPTASPIAGAPANSAQT--PDKPKSASEH------RKSSKPIMEKRRRARINES 53

Query:   290 LALLKALILDSAKTENTKHSKLEKADILELTVRHLQR-QKI-----LSSD--IRSKYKAG 341
             L  LK LILD+ K ++++HSKLEKADILE+TV+HL+  Q++     L++D  +  KY+AG
Sbjct:    54 LGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQRVQMTAALTADPSVLGKYRAG 113

Query:   342 YEECSREVSRFLETPE 357
             + EC  EV+RFL T E
Sbjct:   114 FNECMNEVTRFLSTCE 129

 Score = 55 (24.4 bits), Expect = 8.5e-29, Sum P(3) = 8.5e-29
 Identities = 16/59 (27%), Positives = 27/59 (45%)

Query:   530 GQVVFILPNYMAPSTSPPCKDDLKS------SPPPLSNLDQPLDFSIKRD--DSMWRPW 580
             G V+ +  N  +P   PP +  ++         P ++    PL  S + D  +S+WRPW
Sbjct:   220 GPVIPLYANATSPG-GPPSQSPVQGLTSFAHKMPHMAQAVSPLGGSTRADSAESVWRPW 277

 Score = 50 (22.7 bits), Expect = 2.8e-28, Sum P(3) = 2.8e-28
 Identities = 12/26 (46%), Positives = 18/26 (69%)

Query:   521 QLIPSRLPDGQVVFILPNYMAPSTSP 546
             QL+P+   DGQ  F++PN  A ++SP
Sbjct:   197 QLVPAT--DGQFAFLIPN-PAYTSSP 219

 Score = 48 (22.0 bits), Expect = 8.5e-29, Sum P(3) = 8.5e-29
 Identities = 8/20 (40%), Positives = 14/20 (70%)

Query:   403 IDSGVRQRLFRHLENCMSEI 422
             +++ VR RL  HL +C+ +I
Sbjct:   131 VNTEVRTRLLGHLSSCLGQI 150


>UNIPROTKB|I3LBX1 [details] [associations]
            symbol:HES4 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0046983
            "protein dimerization activity" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] InterPro:IPR003650 InterPro:IPR011598
            Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054
            SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR018352
            SMART:SM00511 GeneTree:ENSGT00700000104168 KO:K09089 OMA:GPWRPWL
            EMBL:FP565685 RefSeq:XP_003481977.1 Ensembl:ENSSSCT00000024059
            GeneID:100739264 KEGG:ssc:100739264 Uniprot:I3LBX1
        Length = 228

 Score = 253 (94.1 bits), Expect = 3.5e-26, Sum P(3) = 3.5e-26
 Identities = 54/91 (59%), Positives = 73/91 (80%)

Query:   271 KRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQ---RQ 327
             ++++KP+MEKRRRARIN+SLA LK LILD+ + E+++HSKLEKADILE+TVRHLQ   R 
Sbjct:    35 RKSSKPVMEKRRRARINESLAQLKTLILDALRKESSRHSKLEKADILEMTVRHLQSLRRV 94

Query:   328 KI---LSSD--IRSKYKAGYEECSREVSRFL 353
             ++   LS+D  +  KY+AG+ EC  EV+RFL
Sbjct:    95 QVTAALSADPAVLGKYRAGFNECLAEVNRFL 125

 Score = 42 (19.8 bits), Expect = 3.5e-26, Sum P(3) = 3.5e-26
 Identities = 7/20 (35%), Positives = 12/20 (60%)

Query:   403 IDSGVRQRLFRHLENCMSEI 422
             + + VR RL  HL  C+ ++
Sbjct:   131 VPADVRSRLLGHLAACLGQL 150

 Score = 37 (18.1 bits), Expect = 3.5e-26, Sum P(3) = 3.5e-26
 Identities = 8/26 (30%), Positives = 13/26 (50%)

Query:   218 GTPDSSTGCQTKPRSTVKKDTHSPPL 243
             G P S++    +PRS  +    S P+
Sbjct:    16 GAPASASRTPNEPRSAAEPRKSSKPV 41


>UNIPROTKB|J9NTM5 [details] [associations]
            symbol:HES4 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 GO:GO:0005634 GO:GO:0006355
            GO:GO:0003677 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
            InterPro:IPR018352 SMART:SM00511 GeneTree:ENSGT00700000104168
            EMBL:AAEX03003836 EMBL:AAEX03003832 EMBL:AAEX03003833
            EMBL:AAEX03003834 EMBL:AAEX03003835 Ensembl:ENSCAFT00000049600
            Uniprot:J9NTM5
        Length = 214

 Score = 249 (92.7 bits), Expect = 5.2e-26, Sum P(3) = 5.2e-26
 Identities = 53/91 (58%), Positives = 73/91 (80%)

Query:   271 KRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQ---RQ 327
             ++++KP+MEKRRRARIN+SLA LK LILD+ + ++++HSKLEKADILE+TVRHLQ   R 
Sbjct:    35 RKSSKPVMEKRRRARINESLAQLKTLILDAFRKDSSRHSKLEKADILEMTVRHLQSLRRV 94

Query:   328 KI---LSSD--IRSKYKAGYEECSREVSRFL 353
             ++   LS+D  +  KY+AG+ EC  EV+RFL
Sbjct:    95 QVTAALSADPAVLGKYRAGFNECLAEVNRFL 125

 Score = 41 (19.5 bits), Expect = 5.2e-26, Sum P(3) = 5.2e-26
 Identities = 7/20 (35%), Positives = 12/20 (60%)

Query:   403 IDSGVRQRLFRHLENCMSEI 422
             + + VR RL  HL  C+ ++
Sbjct:   131 VPAEVRSRLLGHLAACLGQL 150

 Score = 41 (19.5 bits), Expect = 5.2e-26, Sum P(3) = 5.2e-26
 Identities = 9/26 (34%), Positives = 13/26 (50%)

Query:   218 GTPDSSTGCQTKPRSTVKKDTHSPPL 243
             G P S++    KPRS  +    S P+
Sbjct:    16 GAPASASRTPNKPRSAAEHRKSSKPV 41


>FB|FBgn0001168 [details] [associations]
            symbol:h "hairy" species:7227 "Drosophila melanogaster"
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=IDA;TAS] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=NAS;IMP;IDA;TAS;IPI]
            [GO:0070888 "E-box binding" evidence=IDA] [GO:0000978 "RNA
            polymerase II core promoter proximal region sequence-specific DNA
            binding" evidence=IDA] [GO:0001078 "RNA polymerase II core promoter
            proximal region sequence-specific DNA binding transcription factor
            activity involved in negative regulation of transcription"
            evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0005515
            "protein binding" evidence=IPI] [GO:0008134 "transcription factor
            binding" evidence=IPI] [GO:0005634 "nucleus" evidence=NAS]
            [GO:0008407 "chaeta morphogenesis" evidence=NAS] [GO:0007366
            "periodic partitioning by pair rule gene" evidence=NAS;TAS]
            [GO:0007460 "R8 cell fate commitment" evidence=NAS] [GO:0007435
            "salivary gland morphogenesis" evidence=IGI;IMP;TAS] [GO:0000902
            "cell morphogenesis" evidence=IMP] [GO:0035239 "tube morphogenesis"
            evidence=IMP] [GO:0007431 "salivary gland development"
            evidence=TAS] [GO:0016044 "cellular membrane organization"
            evidence=TAS] [GO:0007399 "nervous system development"
            evidence=TAS] [GO:0046983 "protein dimerization activity"
            evidence=IEA] [GO:0035289 "posterior head segmentation"
            evidence=TAS] [GO:0035290 "trunk segmentation" evidence=TAS]
            [GO:0007424 "open tracheal system development" evidence=IMP]
            [GO:0031323 "regulation of cellular metabolic process"
            evidence=IMP] [GO:0001666 "response to hypoxia" evidence=IMP]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0005634
            EMBL:AE014296 GO:GO:0007435 GO:GO:0001078 GO:GO:0001666
            GO:GO:0000978 GO:GO:0000902 GO:GO:0007366 Gene3D:4.10.280.10
            SUPFAM:SSF47459 GO:GO:0016044 GO:GO:0070888 InterPro:IPR018352
            SMART:SM00511 GO:GO:0035289 GO:GO:0007424 GO:GO:0007460
            eggNOG:NOG319418 KO:K09090 OrthoDB:EOG4M37RH GO:GO:0035290
            GO:GO:0035239 EMBL:X15904 EMBL:X15905 EMBL:AY055833 EMBL:AY055834
            EMBL:AY055835 EMBL:AY055836 EMBL:AY055837 EMBL:AY055838
            EMBL:AY055839 EMBL:AY055840 EMBL:AY055841 EMBL:AY055842
            EMBL:AY119633 PIR:S06956 RefSeq:NP_001014577.1 RefSeq:NP_523977.2
            UniGene:Dm.2554 ProteinModelPortal:P14003 SMR:P14003 DIP:DIP-637N
            IntAct:P14003 STRING:P14003 EnsemblMetazoa:FBtr0076569
            EnsemblMetazoa:FBtr0100153 GeneID:38995 KEGG:dme:Dmel_CG6494
            UCSC:CG6494-RA CTD:38995 FlyBase:FBgn0001168
            GeneTree:ENSGT00700000104168 InParanoid:P14003 OMA:NGMQVIP
            PhylomeDB:P14003 ChiTaRS:FUT1 GenomeRNAi:38995 NextBio:811370
            Bgee:P14003 GermOnline:CG6494 Uniprot:P14003
        Length = 337

 Score = 229 (85.7 bits), Expect = 2.8e-25, Sum P(4) = 2.8e-25
 Identities = 52/90 (57%), Positives = 66/90 (73%)

Query:   271 KRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQ---RQ 327
             +R+NKP+MEKRRRARIN  L  LK LILD+ K +  +HSKLEKADILE TV+HLQ   RQ
Sbjct:    32 RRSNKPIMEKRRRARINNCLNELKTLILDATKKDPARHSKLEKADILEKTVKHLQELQRQ 91

Query:   328 KIL---SSD--IRSKYKAGYEECSREVSRF 352
             +     ++D  I +K+KAG+ +C  EVSRF
Sbjct:    92 QAAMQQAADPKIVNKFKAGFADCVNEVSRF 121

 Score = 57 (25.1 bits), Expect = 2.8e-25, Sum P(4) = 2.8e-25
 Identities = 8/18 (44%), Positives = 15/18 (83%)

Query:   520 LQLIPSRLPDGQVVFILP 537
             +Q+IP++LP+G +  +LP
Sbjct:   200 MQVIPTKLPNGSIALVLP 217

 Score = 54 (24.1 bits), Expect = 2.8e-25, Sum P(4) = 2.8e-25
 Identities = 16/58 (27%), Positives = 24/58 (41%)

Query:   401 PVIDSGVRQRLFRHLENCMSEIDLDFSASAEKLGITQDFSSEDDSAFPMLRVRPEPDS 458
             P I+   R+RL +HL NC++ +  +      +    Q   S      P     PE DS
Sbjct:   122 PGIEPAQRRRLLQHLSNCINGVKTELHQQQRQ----QQQQSIHAQMLPSPPSSPEQDS 175

 Score = 51 (23.0 bits), Expect = 2.8e-25, Sum P(4) = 2.8e-25
 Identities = 13/50 (26%), Positives = 22/50 (44%)

Query:   538 NYMAPSTSPPCKDDLKSSPPPLSNL---DQPLDFSIKR----DDSMWRPW 580
             +Y  PS +    + +   P  +  +    QPL   IK+    ++  WRPW
Sbjct:   288 SYAPPSPANSSYEPMDIKPSVIQRVPMEQQPLSLVIKKQIKEEEQPWRPW 337


>FB|FBgn0010109 [details] [associations]
            symbol:dpn "deadpan" species:7227 "Drosophila melanogaster"
            [GO:0008345 "larval locomotory behavior" evidence=IMP] [GO:0007549
            "dosage compensation" evidence=IMP] [GO:0008344 "adult locomotory
            behavior" evidence=IMP] [GO:0007540 "sex determination,
            establishment of X:A ratio" evidence=IGI;NAS;IMP] [GO:0005634
            "nucleus" evidence=IC;IDA] [GO:0001078 "RNA polymerase II core
            promoter proximal region sequence-specific DNA binding
            transcription factor activity involved in negative regulation of
            transcription" evidence=IDA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=ISS;IDA]
            [GO:0003677 "DNA binding" evidence=ISS] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=NAS]
            [GO:0007530 "sex determination" evidence=NAS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=NAS] [GO:0046983 "protein dimerization activity"
            evidence=IEA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
            [GO:0007219 "Notch signaling pathway" evidence=IGI] [GO:0002052
            "positive regulation of neuroblast proliferation" evidence=IMP]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 EMBL:AE013599
            GO:GO:0005634 GO:GO:0003677 GO:GO:0001078 GO:GO:0008344
            GO:GO:0007219 GO:GO:0048813 GO:GO:0008345 Gene3D:4.10.280.10
            SUPFAM:SSF47459 GO:GO:0002052 GO:GO:0007540 InterPro:IPR018352
            SMART:SM00511 EMBL:S48025 EMBL:AY071330 RefSeq:NP_476923.1
            UniGene:Dm.525 ProteinModelPortal:Q26263 SMR:Q26263 DIP:DIP-19436N
            IntAct:Q26263 MINT:MINT-314570 STRING:Q26263
            EnsemblMetazoa:FBtr0088803 GeneID:35800 KEGG:dme:Dmel_CG8704
            UCSC:CG8704-RA CTD:35800 FlyBase:FBgn0010109 eggNOG:NOG319418
            GeneTree:ENSGT00700000104130 InParanoid:Q26263 KO:K09090
            OMA:CAEEVNR OrthoDB:EOG4M37RH PhylomeDB:Q26263 GenomeRNAi:35800
            NextBio:795271 Bgee:Q26263 GermOnline:CG8704 GO:GO:0007549
            Uniprot:Q26263
        Length = 435

 Score = 231 (86.4 bits), Expect = 9.0e-24, Sum P(3) = 9.0e-24
 Identities = 50/103 (48%), Positives = 75/103 (72%)

Query:   260 VASSNSIPPA-LKRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILE 318
             +++ N +  A L++ NKP+MEKRRRARIN  L  LK+LIL++ K +  +H+KLEKADILE
Sbjct:    29 MSNPNGLSKAELRKTNKPIMEKRRRARINHCLNELKSLILEAMKKDPARHTKLEKADILE 88

Query:   319 LTVRHLQ---RQKI---LSSD--IRSKYKAGYEECSREVSRFL 353
             +TV+HLQ   RQ++   + SD  +  K+K G+ EC+ EV+R++
Sbjct:    89 MTVKHLQSVQRQQLNMAIQSDPSVVQKFKTGFVECAEEVNRYV 131

 Score = 76 (31.8 bits), Expect = 9.0e-24, Sum P(3) = 9.0e-24
 Identities = 16/28 (57%), Positives = 19/28 (67%)

Query:   520 LQLIPSRLPDGQVVFILPNYMAPSTSPP 547
             LQLIPSRLP G+   I+PN    S +PP
Sbjct:   212 LQLIPSRLPSGEFALIMPN--TGSAAPP 237

 Score = 64 (27.6 bits), Expect = 9.0e-24, Sum P(3) = 9.0e-24
 Identities = 20/55 (36%), Positives = 26/55 (47%)

Query:   403 IDSGVRQRLFRHLENCMSEIDLDFSASAEKLGITQDFSSE-DDSAFPMLRVRPEP 456
             ID+GVRQRL  HL  C +        S E++G   +FS+      FP   V   P
Sbjct:   137 IDTGVRQRLSAHLNQCAN--------SLEQIGSMSNFSNGYRGGLFPATAVTAAP 183

 Score = 51 (23.0 bits), Expect = 3.4e-21, Sum P(3) = 3.4e-21
 Identities = 16/51 (31%), Positives = 23/51 (45%)

Query:   536 LPNYMAPSTSPPCKDDLKSSPPPLS-NLDQP-----LDFSIKRDDSMWRPW 580
             L      STS   K D ++       +LD+P     L  +I++  S WRPW
Sbjct:   385 LQQQQVSSTSGIAKRDREAEAESSDCSLDEPSSKKFLAGAIEKSSSAWRPW 435


>UNIPROTKB|Q9HCC6 [details] [associations]
            symbol:HES4 "Transcription factor HES-4" species:9606 "Homo
            sapiens" [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0007399 "nervous
            system development" evidence=IEA] [GO:0030154 "cell
            differentiation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0008134 "transcription factor binding" evidence=NAS]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0005634
            GO:GO:0007399 GO:GO:0030154 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006351 EMBL:AL645608 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GO:GO:0008134 InterPro:IPR018352 SMART:SM00511 eggNOG:NOG319418
            HOGENOM:HOG000236346 HOVERGEN:HBG005960 EMBL:AB048791 EMBL:BC012351
            IPI:IPI00028151 RefSeq:NP_001135939.1 RefSeq:NP_066993.1
            UniGene:Hs.154029 ProteinModelPortal:Q9HCC6 SMR:Q9HCC6
            IntAct:Q9HCC6 STRING:Q9HCC6 PhosphoSite:Q9HCC6 DMDM:34098717
            UCD-2DPAGE:Q9HCC6 PRIDE:Q9HCC6 DNASU:57801 Ensembl:ENST00000304952
            GeneID:57801 KEGG:hsa:57801 UCSC:uc001aci.2 CTD:57801
            GeneCards:GC01M000924 HGNC:HGNC:24149 MIM:608060 neXtProt:NX_Q9HCC6
            PharmGKB:PA134975318 InParanoid:Q9HCC6 KO:K09089 PhylomeDB:Q9HCC6
            GenomeRNAi:57801 NextBio:64747 ArrayExpress:Q9HCC6 Bgee:Q9HCC6
            CleanEx:HS_HES4 Genevestigator:Q9HCC6 GermOnline:ENSG00000188290
            Uniprot:Q9HCC6
        Length = 221

 Score = 249 (92.7 bits), Expect = 3.9e-23, Sum P(2) = 3.9e-23
 Identities = 53/91 (58%), Positives = 73/91 (80%)

Query:   271 KRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQ---RQ 327
             ++++KP+MEKRRRARIN+SLA LK LILD+ + E+++HSKLEKADILE+TVRHL+   R 
Sbjct:    35 RKSSKPVMEKRRRARINESLAQLKTLILDALRKESSRHSKLEKADILEMTVRHLRSLRRV 94

Query:   328 KI---LSSD--IRSKYKAGYEECSREVSRFL 353
             ++   LS+D  +  KY+AG+ EC  EV+RFL
Sbjct:    95 QVTAALSADPAVLGKYRAGFHECLAEVNRFL 125

 Score = 41 (19.5 bits), Expect = 3.9e-23, Sum P(2) = 3.9e-23
 Identities = 7/20 (35%), Positives = 12/20 (60%)

Query:   403 IDSGVRQRLFRHLENCMSEI 422
             + + VR RL  HL  C+ ++
Sbjct:   131 VPADVRSRLLGHLAACLRQL 150


>UNIPROTKB|E9PB28 [details] [associations]
            symbol:HES4 "Transcription factor HES-4" species:9606 "Homo
            sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
            "protein dimerization activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] InterPro:IPR003650 InterPro:IPR011598
            Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054
            SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006351 EMBL:AL645608 Gene3D:4.10.280.10 SUPFAM:SSF47459
            InterPro:IPR018352 SMART:SM00511 RefSeq:NP_001135939.1
            UniGene:Hs.154029 DNASU:57801 GeneID:57801 KEGG:hsa:57801 CTD:57801
            HGNC:HGNC:24149 KO:K09089 GenomeRNAi:57801 NextBio:64747
            IPI:IPI00917954 ProteinModelPortal:E9PB28 SMR:E9PB28
            Ensembl:ENST00000428771 UCSC:uc010nyc.1 OMA:GPWRPWL
            ArrayExpress:E9PB28 Bgee:E9PB28 Uniprot:E9PB28
        Length = 247

 Score = 248 (92.4 bits), Expect = 5.1e-23, Sum P(2) = 5.1e-23
 Identities = 65/145 (44%), Positives = 90/145 (62%)

Query:   218 GTPDSSTGCQTKPRSTVK-KDTHSPPLKRSLNKTLVVMSSPPLVASSNSIPPALKRANKP 276
             G P S++    KPRS  + +   S P  R          + P       +P    +++KP
Sbjct:    16 GAPASASRTPDKPRSAAEHRKVGSRPGVRGATGGREGRGTQP-------VPDP--QSSKP 66

Query:   277 LMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQ---RQKI---L 330
             +MEKRRRARIN+SLA LK LILD+ + E+++HSKLEKADILE+TVRHL+   R ++   L
Sbjct:    67 VMEKRRRARINESLAQLKTLILDALRKESSRHSKLEKADILEMTVRHLRSLRRVQVTAAL 126

Query:   331 SSD--IRSKYKAGYEECSREVSRFL 353
             S+D  +  KY+AG+ EC  EV+RFL
Sbjct:   127 SADPAVLGKYRAGFHECLAEVNRFL 151

 Score = 41 (19.5 bits), Expect = 5.1e-23, Sum P(2) = 5.1e-23
 Identities = 7/20 (35%), Positives = 12/20 (60%)

Query:   403 IDSGVRQRLFRHLENCMSEI 422
             + + VR RL  HL  C+ ++
Sbjct:   157 VPADVRSRLLGHLAACLRQL 176


>UNIPROTKB|J9NV17 [details] [associations]
            symbol:HES4 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 GO:GO:0005634 GO:GO:0006355
            GO:GO:0003677 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
            InterPro:IPR018352 SMART:SM00511 GeneTree:ENSGT00700000104168
            EMBL:AAEX03003836 EMBL:AAEX03003832 EMBL:AAEX03003833
            EMBL:AAEX03003834 EMBL:AAEX03003835 Ensembl:ENSCAFT00000043997
            OMA:GHLATCL Uniprot:J9NV17
        Length = 157

 Score = 246 (91.7 bits), Expect = 8.8e-23, Sum P(2) = 8.8e-23
 Identities = 53/90 (58%), Positives = 72/90 (80%)

Query:   272 RANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQ---RQK 328
             +++KP+MEKRRRARIN+SLA LK LILD+ + ++++HSKLEKADILE+TVRHLQ   R +
Sbjct:     1 QSSKPVMEKRRRARINESLAQLKTLILDAFRKDSSRHSKLEKADILEMTVRHLQSLRRVQ 60

Query:   329 I---LSSD--IRSKYKAGYEECSREVSRFL 353
             +   LS+D  +  KY+AG+ EC  EV+RFL
Sbjct:    61 VTAALSADPAVLGKYRAGFNECLAEVNRFL 90

 Score = 41 (19.5 bits), Expect = 8.8e-23, Sum P(2) = 8.8e-23
 Identities = 7/20 (35%), Positives = 12/20 (60%)

Query:   403 IDSGVRQRLFRHLENCMSEI 422
             + + VR RL  HL  C+ ++
Sbjct:    96 VPAEVRSRLLGHLAACLGQL 115


>UNIPROTKB|E1BP65 [details] [associations]
            symbol:HES4 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0046983
            "protein dimerization activity" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] InterPro:IPR003650 InterPro:IPR011598
            Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054
            SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR018352
            SMART:SM00511 GeneTree:ENSGT00700000104168 CTD:57801 KO:K09089
            OMA:GPWRPWL EMBL:DAAA02043249 IPI:IPI00694948 RefSeq:XP_002694182.1
            RefSeq:XP_584091.2 Ensembl:ENSBTAT00000019571 GeneID:507480
            KEGG:bta:507480 NextBio:20868081 Uniprot:E1BP65
        Length = 222

 Score = 241 (89.9 bits), Expect = 4.2e-22, Sum P(2) = 4.2e-22
 Identities = 53/91 (58%), Positives = 72/91 (79%)

Query:   271 KRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQ---RQ 327
             ++++KP+MEKRRRARIN+SLA L++L+LD+ + E+++ SKLEKADILELTVRHLQ   R 
Sbjct:    35 RKSSKPVMEKRRRARINESLAQLQSLLLDALRKESSRRSKLEKADILELTVRHLQSLRRV 94

Query:   328 KI---LSSD--IRSKYKAGYEECSREVSRFL 353
             ++   L SD  I  KY+AG+ EC  EV+RFL
Sbjct:    95 QVTAALRSDPAILGKYRAGFHECLAEVNRFL 125

 Score = 40 (19.1 bits), Expect = 4.2e-22, Sum P(2) = 4.2e-22
 Identities = 7/20 (35%), Positives = 12/20 (60%)

Query:   403 IDSGVRQRLFRHLENCMSEI 422
             + + VR RL  HL  C++ +
Sbjct:   131 VPADVRSRLLCHLAACLARL 150


>UNIPROTKB|F1N0L3 [details] [associations]
            symbol:HES2 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0046983
            "protein dimerization activity" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] InterPro:IPR003650 InterPro:IPR011598
            Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054
            SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR018352
            SMART:SM00511 GeneTree:ENSGT00700000104168 CTD:54626 KO:K09087
            OMA:EGYSACV EMBL:DAAA02043087 IPI:IPI01000073 RefSeq:NP_001185934.1
            UniGene:Bt.36457 Ensembl:ENSBTAT00000028261 GeneID:516433
            KEGG:bta:516433 NextBio:20872221 Uniprot:F1N0L3
        Length = 165

 Score = 196 (74.1 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18
 Identities = 45/94 (47%), Positives = 60/94 (63%)

Query:   267 PPALKRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQR 326
             P  L+++ KPL+EKRRRARIN+SL+ LK LIL     E++++SKLEKADILE+TVR LQ 
Sbjct:    10 PAELRKSLKPLLEKRRRARINESLSQLKGLILPLLGRESSRYSKLEKADILEMTVRFLQE 69

Query:   327 QKILSSDIRS-----KYKAGYEECSREVSRFLET 355
                 S    +      Y+ GY  C   ++R L T
Sbjct:    70 LPASSGPTAAPTPSDSYREGYRACLARLARVLPT 103

 Score = 53 (23.7 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18
 Identities = 12/34 (35%), Positives = 15/34 (44%)

Query:   547 PCKDDLKSSPPPLSNLDQPLDFSIKRDDSMWRPW 580
             PC     S PPP  +   P      R+  +WRPW
Sbjct:   136 PCGPPAPS-PPPAPSPSPP---EPPRNSGLWRPW 165


>UNIPROTKB|Q00P32 [details] [associations]
            symbol:hes2 "Transcription factor HES-2" species:8355
            "Xenopus laevis" [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IMP] [GO:0005634
            "nucleus" evidence=ISS] [GO:0014015 "positive regulation of
            gliogenesis" evidence=IMP] [GO:0042803 "protein homodimerization
            activity" evidence=IPI] [GO:0043425 "bHLH transcription factor
            binding" evidence=IPI] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=IMP] [GO:0046982 "protein
            heterodimerization activity" evidence=IPI] [GO:0050768 "negative
            regulation of neurogenesis" evidence=IMP] [GO:0060042 "retina
            morphogenesis in camera-type eye" evidence=IMP] InterPro:IPR011598
            Pfam:PF00010 PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353
            GO:GO:0005634 GO:GO:0003677 GO:GO:0006351 GO:GO:0000122
            Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0050768 CTD:54626
            KO:K09087 EMBL:DQ156231 EMBL:BC084134 EMBL:BC092348
            RefSeq:NP_001116354.1 UniGene:Xl.49528 GeneID:495039
            KEGG:xla:495039 Xenbase:XB-GENE-865581 GO:GO:0014015 GO:GO:0060042
            Uniprot:Q00P32
        Length = 191

 Score = 197 (74.4 bits), Expect = 3.9e-17, Sum P(2) = 3.9e-17
 Identities = 45/97 (46%), Positives = 59/97 (60%)

Query:   258 PLVASSNSIPPALKRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADIL 317
             P     N     L++  KPLMEKRRRARIN+SL  LK LIL     +N+++SKLEKADIL
Sbjct:    16 PKPGKRNQEASELRKTLKPLMEKRRRARINESLNQLKTLILPLIGKDNSRYSKLEKADIL 75

Query:   318 ELTVRHLQR-QKILSSDIRSKYKAGYEECSREVSRFL 353
             E+TVR L+    + + +   +YK GY  C   +S  L
Sbjct:    76 EMTVRFLRDIPPVQAQNQADRYKEGYRACVERLSAIL 112

 Score = 40 (19.1 bits), Expect = 3.9e-17, Sum P(2) = 3.9e-17
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query:   573 DDSMWRPW 580
             + S+WRPW
Sbjct:   184 NSSIWRPW 191


>UNIPROTKB|F1RIL7 [details] [associations]
            symbol:HES2 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0046983
            "protein dimerization activity" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] InterPro:IPR003650 InterPro:IPR011598
            Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054
            SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR018352
            SMART:SM00511 GeneTree:ENSGT00700000104168 KO:K09087 OMA:EGYSACV
            EMBL:FP102449 RefSeq:XP_003127577.1 Ensembl:ENSSSCT00000003743
            GeneID:100515666 KEGG:ssc:100515666 Uniprot:F1RIL7
        Length = 165

 Score = 182 (69.1 bits), Expect = 7.9e-17, Sum P(2) = 7.9e-17
 Identities = 44/92 (47%), Positives = 56/92 (60%)

Query:   267 PPALKRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQR 326
             P  L++  KPL+EKRRRARIN SL+ LK LIL     E++ +SKLEKADILE+TVR LQ 
Sbjct:    10 PAELRKNLKPLLEKRRRARINASLSQLKGLILPLLGRESSHYSKLEKADILEMTVRFLQE 69

Query:   327 QKILSSDIRS-----KYKAGYEECSREVSRFL 353
                 S    +      Y+ GY  C   ++R L
Sbjct:    70 LPASSCPTAAPTSSDSYREGYRACLARLARVL 101

 Score = 53 (23.7 bits), Expect = 7.9e-17, Sum P(2) = 7.9e-17
 Identities = 11/26 (42%), Positives = 13/26 (50%)

Query:   555 SPPPLSNLDQPLDFSIKRDDSMWRPW 580
             SPPP      P+     R  S+WRPW
Sbjct:   143 SPPPAPAPSPPVP---PRGPSLWRPW 165


>ZFIN|ZDB-GENE-060825-55 [details] [associations]
            symbol:hes2.2 "hairy and enhancer of split 2.2"
            species:7955 "Danio rerio" [GO:0046983 "protein dimerization
            activity" evidence=IEA] InterPro:IPR011598 Pfam:PF00010
            PROSITE:PS50888 SMART:SM00353 ZFIN:ZDB-GENE-060825-55
            Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00700000104168
            HOGENOM:HOG000236346 HOVERGEN:HBG005960 eggNOG:NOG259850
            EMBL:CR954167 IPI:IPI00786709 UniGene:Dr.88661
            Ensembl:ENSDART00000138125 OMA:PNITASE OrthoDB:EOG4RJG33
            Uniprot:B0V2G5
        Length = 191

 Score = 186 (70.5 bits), Expect = 5.1e-16, Sum P(2) = 5.1e-16
 Identities = 45/90 (50%), Positives = 55/90 (61%)

Query:   270 LKRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQR-QK 328
             L++  KPL+EK+RRARIN SL  LKALIL     +N ++SKLEKADILE+TVR L   Q 
Sbjct:    27 LRKTLKPLLEKKRRARINDSLDRLKALILPLTGKDNCRYSKLEKADILEMTVRFLTDIQT 86

Query:   329 ILSSDIRSKYKAGYEECSREVSRFLETPEL 358
               S D    +  GY  C + VS  L    L
Sbjct:    87 TPSKDTAVSFTEGYTTCLQRVSARLPQTSL 116

 Score = 41 (19.5 bits), Expect = 5.1e-16, Sum P(2) = 5.1e-16
 Identities = 14/38 (36%), Positives = 18/38 (47%)

Query:   543 STSPPCKDDLKSSPPPLSNLDQPLDFSIKRDDSMWRPW 580
             ST+P  K D+ S P P+     PL   +      WRPW
Sbjct:   167 STNP--KQDILSRPEPV-----PLITEV------WRPW 191

 Score = 38 (18.4 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
 Identities = 11/41 (26%), Positives = 18/41 (43%)

Query:   416 ENCMSEIDLDFSASAEKLGITQDFSSEDDSAFPMLRVRPEP 456
             +NC ++     S   +KL   +  SS   +    +  RPEP
Sbjct:   140 QNCCAQSSRMMSQIQQKLQNLKSSSSRSTNPKQDILSRPEP 180


>ZFIN|ZDB-GENE-081104-104 [details] [associations]
            symbol:hes2.1 "hairy and enhancer of split 2.1"
            species:7955 "Danio rerio" [GO:0046983 "protein dimerization
            activity" evidence=IEA] InterPro:IPR011598 Pfam:PF00010
            PROSITE:PS50888 SMART:SM00353 ZFIN:ZDB-GENE-081104-104
            Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00700000104168
            EMBL:CR954167 IPI:IPI00890411 Ensembl:ENSDART00000111075
            Uniprot:E7F1P6
        Length = 195

 Score = 186 (70.5 bits), Expect = 5.1e-16, Sum P(2) = 5.1e-16
 Identities = 44/90 (48%), Positives = 58/90 (64%)

Query:   270 LKRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQRQKI 329
             L++  KPLMEKRRRARIN SL  LK LIL     + +++SKLEKADILE+TVR L+    
Sbjct:    29 LRKTLKPLMEKRRRARINDSLNHLKTLILPLVGKDASRYSKLEKADILEMTVRFLRDLPS 88

Query:   330 LSSDIRS-KYKAGYEECSREVSRFLETPEL 358
              S+  ++  YK GY+ C + +S  L    L
Sbjct:    89 SSAKGQTDSYKEGYKACLQRISTMLPQSNL 118

 Score = 41 (19.5 bits), Expect = 5.1e-16, Sum P(2) = 5.1e-16
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query:   574 DSMWRPW 580
             + MWRPW
Sbjct:   189 EDMWRPW 195


>UNIPROTKB|Q9Y543 [details] [associations]
            symbol:HES2 "Transcription factor HES-2" species:9606 "Homo
            sapiens" [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0003690 "double-stranded DNA binding" evidence=IEA] [GO:0045892
            "negative regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0008134 "transcription
            factor binding" evidence=NAS] InterPro:IPR003650 InterPro:IPR011598
            Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054
            SMART:SM00353 GO:GO:0005634 GO:GO:0045892 EMBL:CH471130
            GO:GO:0006351 GO:GO:0003690 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GO:GO:0008134 EMBL:AL031848 InterPro:IPR018352 SMART:SM00511
            HOGENOM:HOG000236346 HOVERGEN:HBG005960 EMBL:AK091122 EMBL:BC012091
            EMBL:BC132698 EMBL:BC136963 EMBL:BC142687 IPI:IPI00001055
            IPI:IPI00061562 RefSeq:NP_061962.2 UniGene:Hs.118727
            ProteinModelPortal:Q9Y543 SMR:Q9Y543 STRING:Q9Y543
            PhosphoSite:Q9Y543 DMDM:12643954 PRIDE:Q9Y543
            Ensembl:ENST00000377834 Ensembl:ENST00000377836
            Ensembl:ENST00000377837 GeneID:54626 KEGG:hsa:54626 UCSC:uc001amw.3
            UCSC:uc001amx.3 CTD:54626 GeneCards:GC01M006406 HGNC:HGNC:16005
            HPA:HPA039462 MIM:609970 neXtProt:NX_Q9Y543 PharmGKB:PA134958805
            eggNOG:NOG259850 InParanoid:Q9Y543 KO:K09087 OMA:EGYSACV
            PhylomeDB:Q9Y543 GenomeRNAi:54626 NextBio:57166 ArrayExpress:Q9Y543
            Bgee:Q9Y543 CleanEx:HS_HES2 Genevestigator:Q9Y543
            GermOnline:ENSG00000069812 Uniprot:Q9Y543
        Length = 173

 Score = 184 (69.8 bits), Expect = 8.4e-16, Sum P(2) = 8.4e-16
 Identities = 44/89 (49%), Positives = 56/89 (62%)

Query:   270 LKRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQRQKI 329
             L+++ KPL+EKRRRARINQSL+ LK LIL     EN+  SKLEKAD+LE+TVR LQ    
Sbjct:    13 LRKSLKPLLEKRRRARINQSLSQLKGLILPLLGRENSNCSKLEKADVLEMTVRFLQELPA 72

Query:   330 LSSDIRS-----KYKAGYEECSREVSRFL 353
              S    +      Y+ GY  C   ++R L
Sbjct:    73 SSWPTAAPLPCDSYREGYSACVARLARVL 101

 Score = 41 (19.5 bits), Expect = 8.4e-16, Sum P(2) = 8.4e-16
 Identities = 10/38 (26%), Positives = 15/38 (39%)

Query:   543 STSPPCKDDLKSSPPPLSNLDQPLDFSIKRDDSMWRPW 580
             S+ P       +S P  ++   P   S      +WRPW
Sbjct:   136 SSGPSAPAPAPASAPEPASAPVPSPPSPPCGPGLWRPW 173

 Score = 38 (18.4 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
 Identities = 13/57 (22%), Positives = 21/57 (36%)

Query:   402 VIDSGVRQRLFRHLENCMSEIDLDFSASAEKLGITQDFSSEDDSAFPMLRVRPEPDS 458
             V++  V  RL  HL    +   LD   + +  G +    +   +  P     P P S
Sbjct:   106 VLEPAVSARLLEHLWRRAASATLDGGRAGDSSGPSAPAPAPASAPEPASAPVPSPPS 162


>ZFIN|ZDB-GENE-980526-204 [details] [associations]
            symbol:her3 "hairy-related 3" species:7955 "Danio
            rerio" [GO:0003677 "DNA binding" evidence=IEA;IDA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0050768 "negative regulation of neurogenesis" evidence=IMP]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=IDA]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353
            ZFIN:ZDB-GENE-980526-204 GO:GO:0005634 GO:GO:0045892 GO:GO:0003677
            GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0050768
            InterPro:IPR018352 SMART:SM00511 eggNOG:NOG272757 OrthoDB:EOG4PVP15
            EMBL:BC092924 IPI:IPI00505890 UniGene:Dr.75064 STRING:Q568C3
            HOVERGEN:HBG098268 InParanoid:Q568C3 ArrayExpress:Q568C3
            Uniprot:Q568C3
        Length = 253

 Score = 202 (76.2 bits), Expect = 1.4e-15, P = 1.4e-15
 Identities = 54/108 (50%), Positives = 68/108 (62%)

Query:   259 LVASSNSI----PPALKRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKA 314
             + A+SNS     P  +K+ +KPLMEK+RRARIN+ L  LK+L L+SA + N +  KLEKA
Sbjct:    25 MAAASNSAATAKPQNVKKVSKPLMEKKRRARINKCLNQLKSL-LESACSNNIRKRKLEKA 83

Query:   315 DILELTV---RHLQRQKI-LSSDIRS-KYKAGYEECSREVSRFLETPE 357
             DILELTV   RHLQ  K  LS    S +Y AGY  C   VS +L   +
Sbjct:    84 DILELTVKHLRHLQNTKRGLSKACDSAEYHAGYRSCLNTVSHYLRASD 131


>UNIPROTKB|E2R0N6 [details] [associations]
            symbol:HES2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 GO:GO:0005634 GO:GO:0006355
            GO:GO:0003677 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GeneTree:ENSGT00700000104168 EMBL:AAEX03003901 EMBL:AAEX03003895
            EMBL:AAEX03003896 EMBL:AAEX03003897 EMBL:AAEX03003898
            EMBL:AAEX03003899 EMBL:AAEX03003900 Ensembl:ENSCAFT00000031121
            OMA:ELPASAC Uniprot:E2R0N6
        Length = 173

 Score = 175 (66.7 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
 Identities = 43/92 (46%), Positives = 56/92 (60%)

Query:   267 PPALKRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQR 326
             P  L+++ KPL+EKRRRARIN SL  LK LIL     E++ +SKLEKADILE+TVR L+ 
Sbjct:    10 PAELRKSLKPLLEKRRRARINASLRQLKGLILPLLGRESSHYSKLEKADILEMTVRFLRE 69

Query:   327 QKILSSDIRSK-----YKAGYEECSREVSRFL 353
                     R++     Y  GY  C   ++R L
Sbjct:    70 LPASYRAARTQAPSDGYGEGYRACLARLARVL 101

 Score = 40 (19.1 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
 Identities = 11/38 (28%), Positives = 16/38 (42%)

Query:   547 PCKDDLKSSPPPLSNLDQPLDF----SIKRDDSMWRPW 580
             PC   + S PPP +     L      S  +   +WRP+
Sbjct:   136 PCGRPMPSPPPPPAPAPTLLPIQTPPSPPQTPGLWRPY 173


>RGD|62082 [details] [associations]
            symbol:Hes2 "hairy and enhancer of split 2 (Drosophila)"
           species:10116 "Rattus norvegicus" [GO:0003690 "double-stranded DNA
           binding" evidence=IDA] [GO:0005634 "nucleus" evidence=TAS]
           [GO:0006351 "transcription, DNA-dependent" evidence=IEA] [GO:0006355
           "regulation of transcription, DNA-dependent" evidence=TAS]
           [GO:0045892 "negative regulation of transcription, DNA-dependent"
           evidence=IDA] [GO:0046983 "protein dimerization activity"
           evidence=IEA] InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010
           Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 RGD:62082
           GO:GO:0005634 GO:GO:0045892 GO:GO:0006351 GO:GO:0003690
           Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR018352 SMART:SM00511
           GeneTree:ENSGT00700000104168 HOGENOM:HOG000236346 HOVERGEN:HBG005960
           CTD:54626 eggNOG:NOG259850 KO:K09087 OMA:EGYSACV OrthoDB:EOG4KPTC7
           EMBL:D14029 IPI:IPI00198610 PIR:S35037 RefSeq:NP_062109.1
           UniGene:Rn.44655 ProteinModelPortal:P35429 STRING:P35429
           Ensembl:ENSRNOT00000014035 GeneID:29567 KEGG:rno:29567
           UCSC:RGD:62082 InParanoid:P35429 NextBio:609640
           Genevestigator:P35429 GermOnline:ENSRNOG00000010490 Uniprot:P35429
        Length = 157

 Score = 186 (70.5 bits), Expect = 7.8e-14, P = 7.8e-14
 Identities = 42/89 (47%), Positives = 59/89 (66%)

Query:   270 LKRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQRQ-- 327
             L+++ KPL+EKRRRARIN+SL+ LK L+L     E +++SKLEKADILE+TVR L+ Q  
Sbjct:    13 LRKSLKPLLEKRRRARINESLSQLKGLVLPLLGAETSRYSKLEKADILEMTVRFLREQPA 72

Query:   328 KILSSDIRSK---YKAGYEECSREVSRFL 353
              + S++       Y  GY  C   ++R L
Sbjct:    73 SVCSTEAPGSLDSYLEGYRACLARLARVL 101


>FB|FBgn0002734 [details] [associations]
            symbol:E(spl)mdelta-HLH "Enhancer of split mdelta,
            helix-loop-helix" species:7227 "Drosophila melanogaster"
            [GO:0003677 "DNA binding" evidence=ISS;NAS] [GO:0005634 "nucleus"
            evidence=IC;NAS] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=ISS;IDA;IMP] [GO:0043565
            "sequence-specific DNA binding" evidence=IDA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=TAS] [GO:0048749 "compound eye development" evidence=TAS]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=NAS] [GO:0007219 "Notch signaling pathway" evidence=NAS]
            [GO:0007399 "nervous system development" evidence=NAS] [GO:0046983
            "protein dimerization activity" evidence=IEA] [GO:0045466 "R7 cell
            differentiation" evidence=IMP] [GO:0048052 "R1/R6 cell
            differentiation" evidence=IMP] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 EMBL:AE014297 GO:GO:0005634
            GO:GO:0043565 GO:GO:0007219 GO:GO:0003700 GO:GO:0006351
            GO:GO:0000122 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR018352
            SMART:SM00511 GeneTree:ENSGT00700000104130 KO:K09090 GO:GO:0045466
            EMBL:AY779906 EMBL:AY779907 EMBL:AY779908 EMBL:AY779909
            EMBL:AY779910 EMBL:AY779911 EMBL:AY779912 EMBL:AY779913
            EMBL:AY779914 EMBL:AY779915 EMBL:AY779916 EMBL:AY779917
            EMBL:AY779918 EMBL:AY779919 EMBL:AY779920 EMBL:AY779921 EMBL:X67048
            EMBL:M96168 EMBL:BT022133 EMBL:AY905719 EMBL:AY905720 EMBL:AY905721
            EMBL:AY905722 EMBL:AY905723 EMBL:AY905724 EMBL:AY905725
            EMBL:AY905726 EMBL:AY905727 EMBL:AY905728 EMBL:AY905729
            EMBL:AY905730 EMBL:AY905731 EMBL:AY905732 EMBL:AY905733
            EMBL:AY905734 EMBL:AY905735 EMBL:AY905736 EMBL:AY905737
            EMBL:AY905738 EMBL:AY905739 EMBL:AY905740 EMBL:AY905741
            EMBL:AY905742 EMBL:AY905743 EMBL:AY905744 EMBL:AY905745
            EMBL:AY905746 EMBL:AY905747 EMBL:AY905748 EMBL:AY905749
            EMBL:AY905750 EMBL:AY905751 EMBL:AY905752 EMBL:AY905753
            EMBL:AY905754 EMBL:AY905755 EMBL:AY905756 EMBL:AY905757
            EMBL:AY905758 EMBL:AY905759 EMBL:AY905760 EMBL:AY905761
            EMBL:AY905762 EMBL:AY905763 EMBL:AY905764 EMBL:AY905765
            EMBL:AY905766 EMBL:AY905767 EMBL:AY905768 EMBL:AY905769
            EMBL:AY905770 EMBL:AY905771 EMBL:AY905772 EMBL:AY905773
            EMBL:AY905774 EMBL:AY905775 EMBL:AY905776 EMBL:AY905777
            EMBL:AY905778 EMBL:AY905779 EMBL:AY905780 EMBL:AY905781
            EMBL:AY905782 EMBL:AY905783 EMBL:AY905784 EMBL:AY905785
            EMBL:AY905786 EMBL:AY905787 EMBL:AY905788 EMBL:AY905789
            EMBL:AY905790 EMBL:AY905791 EMBL:AY905792 EMBL:AY905793
            EMBL:AY905794 EMBL:AY905795 EMBL:AY905796 EMBL:AY905797
            EMBL:AY905798 EMBL:AY905799 EMBL:AY905800 EMBL:AY905801
            EMBL:AY905802 EMBL:AY905803 EMBL:AY905804 EMBL:AY905805
            EMBL:AY905806 EMBL:AY905807 EMBL:AY905808 EMBL:AY905809
            EMBL:AY905810 EMBL:AY905811 PIR:A46177 RefSeq:NP_524503.2
            UniGene:Dm.2355 ProteinModelPortal:Q01071 SMR:Q01071 DIP:DIP-722N
            IntAct:Q01071 MINT:MINT-288607 STRING:Q01071 PRIDE:Q01071
            EnsemblMetazoa:FBtr0084954 GeneID:43150 KEGG:dme:Dmel_CG8328
            CTD:43150 FlyBase:FBgn0002734 eggNOG:NOG253790 InParanoid:Q01071
            OMA:YEVSHIF OrthoDB:EOG4VQ85K PhylomeDB:Q01071 GenomeRNAi:43150
            NextBio:832427 Bgee:Q01071 GermOnline:CG8328 GO:GO:0048052
            Uniprot:Q01071
        Length = 173

 Score = 163 (62.4 bits), Expect = 8.3e-14, Sum P(2) = 8.3e-14
 Identities = 42/101 (41%), Positives = 62/101 (61%)

Query:   271 KRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHL---QRQ 327
             ++  KPL+E++RRAR+N  L  LK LI+D+   +  + SKLEKADILELTV +L   Q+Q
Sbjct:    16 RKVTKPLLERKRRARMNLYLDELKDLIVDTMDAQGEQVSKLEKADILELTVNYLKAQQQQ 75

Query:   328 KILS------SDIR-SKYKAGYEECSREVSRFLET-PELHL 360
             ++ +        +   K++AGY + + EVS    T P L L
Sbjct:    76 RVANPQSPPPDQVNLDKFRAGYTQAAYEVSHIFSTVPGLDL 116

 Score = 44 (20.5 bits), Expect = 8.3e-14, Sum P(2) = 8.3e-14
 Identities = 9/33 (27%), Positives = 16/33 (48%)

Query:   551 DLKSSPPPLSNLDQ---PLDFSIKRDDSMWRPW 580
             D+   P  L++  +   P +  I   + +WRPW
Sbjct:   141 DMAEEPVNLADQKRSKSPREEDIHHGEEVWRPW 173


>MGI|MGI:1098624 [details] [associations]
            symbol:Hes2 "hairy and enhancer of split 2 (Drosophila)"
            species:10090 "Mus musculus" [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003690 "double-stranded DNA binding"
            evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0008134 "transcription factor binding" evidence=NAS]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=ISO] [GO:0046983 "protein dimerization activity"
            evidence=IEA] InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010
            Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353
            MGI:MGI:1098624 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0008134
            EMBL:CH466594 EMBL:AL772240 GeneTree:ENSGT00700000104168
            HOGENOM:HOG000236346 HOVERGEN:HBG005960 CTD:54626 eggNOG:NOG259850
            KO:K09087 OMA:EGYSACV EMBL:AB009967 EMBL:AK053792 EMBL:BC138112
            IPI:IPI00117879 IPI:IPI00554874 RefSeq:NP_032262.2 UniGene:Mm.57038
            ProteinModelPortal:O54792 STRING:O54792 PhosphoSite:O54792
            PRIDE:O54792 Ensembl:ENSMUST00000030782 GeneID:15206 KEGG:mmu:15206
            InParanoid:O54792 OrthoDB:EOG4KPTC7 NextBio:287761 CleanEx:MM_HES2
            Genevestigator:O54792 GermOnline:ENSMUSG00000028940 Uniprot:O54792
        Length = 157

 Score = 182 (69.1 bits), Expect = 2.1e-13, P = 2.1e-13
 Identities = 44/89 (49%), Positives = 57/89 (64%)

Query:   270 LKRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQRQK- 328
             L++  KPL+EKRRRARIN+SL+ LK L+L     E ++ SKLEKADILE+TVR LQ Q  
Sbjct:    13 LRKNLKPLLEKRRRARINESLSQLKGLVLPLLGAETSRSSKLEKADILEMTVRFLQEQPA 72

Query:   329 -ILSSDIR---SKYKAGYEECSREVSRFL 353
              + SS      + Y  GY  C   ++R L
Sbjct:    73 TLYSSAAPGPLNSYLEGYRACLARLARVL 101


>MGI|MGI:104876 [details] [associations]
            symbol:Hes5 "hairy and enhancer of split 5 (Drosophila)"
            species:10090 "Mus musculus" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter"
            evidence=IGI;ISO;IDA;IMP] [GO:0001078 "RNA polymerase II core
            promoter proximal region sequence-specific DNA binding
            transcription factor activity involved in negative regulation of
            transcription" evidence=IDA] [GO:0002062 "chondrocyte
            differentiation" evidence=IMP] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003682 "chromatin binding" evidence=ISO]
            [GO:0003690 "double-stranded DNA binding" evidence=ISO] [GO:0005515
            "protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0006461 "protein complex assembly" evidence=IDA]
            [GO:0007155 "cell adhesion" evidence=IGI] [GO:0007219 "Notch
            signaling pathway" evidence=ISO;IMP;NAS;TAS] [GO:0007224
            "smoothened signaling pathway" evidence=IDA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0007399
            "nervous system development" evidence=IEA] [GO:0007420 "brain
            development" evidence=IMP] [GO:0008134 "transcription factor
            binding" evidence=NAS] [GO:0008284 "positive regulation of cell
            proliferation" evidence=ISO] [GO:0014003 "oligodendrocyte
            development" evidence=IMP] [GO:0021537 "telencephalon development"
            evidence=IGI] [GO:0021781 "glial cell fate commitment"
            evidence=IMP] [GO:0021861 "forebrain radial glial cell
            differentiation" evidence=ISO] [GO:0021915 "neural tube
            development" evidence=IGI] [GO:0022010 "central nervous system
            myelination" evidence=IMP] [GO:0030154 "cell differentiation"
            evidence=IEA] [GO:0030513 "positive regulation of BMP signaling
            pathway" evidence=IGI] [GO:0031641 "regulation of myelination"
            evidence=IMP] [GO:0042491 "auditory receptor cell differentiation"
            evidence=IMP] [GO:0042517 "positive regulation of tyrosine
            phosphorylation of Stat3 protein" evidence=IDA] [GO:0042668
            "auditory receptor cell fate determination" evidence=IMP]
            [GO:0043010 "camera-type eye development" evidence=IMP] [GO:0045595
            "regulation of cell differentiation" evidence=IMP] [GO:0045665
            "negative regulation of neuron differentiation" evidence=IGI;IMP]
            [GO:0045747 "positive regulation of Notch signaling pathway"
            evidence=IMP] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=ISO;IMP] [GO:0045893 "positive regulation
            of transcription, DNA-dependent" evidence=IMP] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IGI] [GO:0046427 "positive regulation of
            JAK-STAT cascade" evidence=IDA] [GO:0046983 "protein dimerization
            activity" evidence=IEA] [GO:0048469 "cell maturation" evidence=IGI]
            [GO:0048661 "positive regulation of smooth muscle cell
            proliferation" evidence=ISO] [GO:0048708 "astrocyte
            differentiation" evidence=IDA] [GO:0048712 "negative regulation of
            astrocyte differentiation" evidence=IDA] [GO:0048715 "negative
            regulation of oligodendrocyte differentiation" evidence=IMP;IDA]
            [GO:0050767 "regulation of neurogenesis" evidence=IGI] [GO:0051216
            "cartilage development" evidence=ISO;IMP] [GO:0097150 "neuronal
            stem cell maintenance" evidence=ISO;IMP] [GO:2000737 "negative
            regulation of stem cell differentiation" evidence=ISO] [GO:2000974
            "negative regulation of pro-B cell differentiation" evidence=ISO]
            [GO:2000978 "negative regulation of forebrain neuron
            differentiation" evidence=ISO] [GO:2000981 "negative regulation of
            inner ear receptor cell differentiation" evidence=IMP]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 MGI:MGI:104876
            GO:GO:0005634 GO:GO:0006461 GO:GO:0001078 GO:GO:0048661
            GO:GO:0045944 GO:GO:0007155 GO:GO:0007219 GO:GO:0045747
            GO:GO:0003682 GO:GO:0043010 GO:GO:0003690 GO:GO:0030513
            GO:GO:0051216 GO:GO:0022010 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GO:GO:0008134 GO:GO:0021915 GO:GO:0007224 GO:GO:0042517
            GO:GO:0048712 GO:GO:0042668 GO:GO:0048469 InterPro:IPR018352
            SMART:SM00511 GO:GO:0021537 GO:GO:0048715 GO:GO:0031641
            GO:GO:0097150 GO:GO:0048708 HOGENOM:HOG000236346 HOVERGEN:HBG005960
            GO:GO:2000974 GO:GO:0072049 GO:GO:0072282 GO:GO:2000737
            GO:GO:0072050 CTD:388585 eggNOG:NOG83691 KO:K06055 OMA:QFLTLHS
            OrthoDB:EOG495ZT5 GO:GO:0021781 GO:GO:2000981 GO:GO:0072086
            EMBL:D32132 EMBL:AK078170 EMBL:AK087508 IPI:IPI00136148 PIR:A55438
            RefSeq:NP_034549.1 UniGene:Mm.137268 ProteinModelPortal:P70120
            SMR:P70120 STRING:P70120 PhosphoSite:P70120 PRIDE:P70120
            Ensembl:ENSMUST00000049621 GeneID:15208 KEGG:mmu:15208
            InParanoid:P70120 NextBio:287769 Bgee:P70120 CleanEx:MM_HES5
            Genevestigator:P70120 GermOnline:ENSMUSG00000048001 Uniprot:P70120
        Length = 167

 Score = 156 (60.0 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
 Identities = 39/103 (37%), Positives = 55/103 (53%)

Query:   256 SPPLVASSNSIPPALKRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKAD 315
             +P  VA     P    R  KP++EK RR RIN S+  LK L+L+     +  +SKLEKAD
Sbjct:     2 APSTVAVEMLSPKEKNRLRKPVVEKMRRDRINSSIEQLK-LLLEQEFARHQPNSKLEKAD 60

Query:   316 ILELTVRHLQRQKILSS-----DIRSKYKAGYEECSREVSRFL 353
             ILE+ V +L+  K  ++      +   Y  GY  C +E  +FL
Sbjct:    61 ILEMAVSYLKHSKAFAAAAGPKSLHQDYSEGYSWCLQEAVQFL 103

 Score = 46 (21.3 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
 Identities = 12/41 (29%), Positives = 18/41 (43%)

Query:   541 APSTSP-PCKDDLKSSPPPLSNLDQPLDFSIKRDDSMWRPW 580
             AP  +P P +   K++   +S   QP          +WRPW
Sbjct:   134 APGAAPQPARSSAKAAAAAVSTSRQPAC-------GLWRPW 167


>UNIPROTKB|E2QXY9 [details] [associations]
            symbol:HES5 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:2000974 "negative regulation of pro-B cell
            differentiation" evidence=ISS] [GO:0043010 "camera-type eye
            development" evidence=ISS] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=ISS] [GO:2000737 "negative
            regulation of stem cell differentiation" evidence=ISS] [GO:0007420
            "brain development" evidence=ISS] [GO:0045893 "positive regulation
            of transcription, DNA-dependent" evidence=ISS] [GO:0097150
            "neuronal stem cell maintenance" evidence=ISS] [GO:0007219 "Notch
            signaling pathway" evidence=ISS] [GO:0051216 "cartilage
            development" evidence=ISS] [GO:0048661 "positive regulation of
            smooth muscle cell proliferation" evidence=ISS] [GO:0046427
            "positive regulation of JAK-STAT cascade" evidence=ISS] [GO:0042517
            "positive regulation of tyrosine phosphorylation of Stat3 protein"
            evidence=ISS] [GO:0008284 "positive regulation of cell
            proliferation" evidence=ISS] [GO:0002062 "chondrocyte
            differentiation" evidence=ISS] [GO:0048708 "astrocyte
            differentiation" evidence=ISS] [GO:0006461 "protein complex
            assembly" evidence=ISS] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0050767 "regulation of neurogenesis" evidence=ISS] [GO:0048469
            "cell maturation" evidence=ISS] [GO:0045665 "negative regulation of
            neuron differentiation" evidence=ISS] [GO:0045595 "regulation of
            cell differentiation" evidence=ISS] [GO:0042491 "auditory receptor
            cell differentiation" evidence=ISS] [GO:0031641 "regulation of
            myelination" evidence=ISS] [GO:0030513 "positive regulation of BMP
            signaling pathway" evidence=ISS] [GO:0022010 "central nervous
            system myelination" evidence=ISS] [GO:0021915 "neural tube
            development" evidence=ISS] [GO:0021781 "glial cell fate commitment"
            evidence=ISS] [GO:0021537 "telencephalon development" evidence=ISS]
            [GO:0014003 "oligodendrocyte development" evidence=ISS] [GO:0007224
            "smoothened signaling pathway" evidence=ISS] [GO:0007155 "cell
            adhesion" evidence=ISS] [GO:0001078 "RNA polymerase II core
            promoter proximal region sequence-specific DNA binding
            transcription factor activity involved in negative regulation of
            transcription" evidence=ISS] [GO:0048715 "negative regulation of
            oligodendrocyte differentiation" evidence=ISS] [GO:0048712
            "negative regulation of astrocyte differentiation" evidence=ISS]
            [GO:2000981 "negative regulation of inner ear receptor cell
            differentiation" evidence=IEA] [GO:0072282 "metanephric nephron
            tubule morphogenesis" evidence=IEA] [GO:0072086 "specification of
            loop of Henle identity" evidence=IEA] [GO:0072050 "S-shaped body
            morphogenesis" evidence=IEA] [GO:0072049 "comma-shaped body
            morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0045747 "positive regulation of Notch signaling pathway"
            evidence=IEA] [GO:0042668 "auditory receptor cell fate
            determination" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 GO:GO:0005634 GO:GO:0045893
            GO:GO:0006461 GO:GO:0003677 GO:GO:0001078 GO:GO:0048661
            GO:GO:0045944 GO:GO:0045665 GO:GO:0007155 GO:GO:0007219
            GO:GO:0045747 GO:GO:0043010 GO:GO:0030513 GO:GO:0051216
            GO:GO:0022010 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0021915
            GO:GO:0007224 GO:GO:0042517 GO:GO:0048712 GO:GO:0042668
            GO:GO:0048469 InterPro:IPR018352 SMART:SM00511 GO:GO:0021537
            GO:GO:0048715 GO:GO:0031641 GO:GO:0042491 GO:GO:0097150
            GeneTree:ENSGT00700000104168 GO:GO:0048708 GO:GO:2000974
            GO:GO:0072049 GO:GO:0072282 GO:GO:2000737 GO:GO:0072050 CTD:388585
            KO:K06055 OMA:QFLTLHS GO:GO:0021781 GO:GO:2000981 GO:GO:0072086
            EMBL:AAEX03003867 RefSeq:XP_546734.2 ProteinModelPortal:E2QXY9
            Ensembl:ENSCAFT00000030874 GeneID:489614 KEGG:cfa:489614
            NextBio:20862770 Uniprot:E2QXY9
        Length = 165

 Score = 155 (59.6 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
 Identities = 39/103 (37%), Positives = 55/103 (53%)

Query:   256 SPPLVASSNSIPPALKRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKAD 315
             +P  VA     P    R  KP++EK RR RIN S+  LK L+L+     +  +SKLEKAD
Sbjct:     2 APSTVAVELLSPKEKNRLRKPVVEKMRRDRINSSIEQLK-LLLEQEFARHQPNSKLEKAD 60

Query:   316 ILELTVRHLQRQKILSS-----DIRSKYKAGYEECSREVSRFL 353
             ILE+ V +L+  K  ++      +   Y  GY  C +E  +FL
Sbjct:    61 ILEMAVSYLKHSKAFAAAAGPKSLHQDYSEGYSWCLQEAVQFL 103

 Score = 47 (21.6 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
 Identities = 12/51 (23%), Positives = 24/51 (47%)

Query:   535 ILPNYMAPSTSP--PCKDDLKSS--PPPLSNLDQPLDFSIKRDD-SMWRPW 580
             +L ++  P  +P  P K+   +   PPP+    +    + ++    +WRPW
Sbjct:   115 LLYHFQRPPAAPTVPTKEPKATGTVPPPVLTPAKATAVAARQPTCGLWRPW 165


>UNIPROTKB|A6H787 [details] [associations]
            symbol:HES5 "HES5 protein" species:9913 "Bos taurus"
            [GO:0008284 "positive regulation of cell proliferation"
            evidence=ISS] [GO:0050767 "regulation of neurogenesis"
            evidence=ISS] [GO:0048469 "cell maturation" evidence=ISS]
            [GO:0045665 "negative regulation of neuron differentiation"
            evidence=ISS] [GO:0045595 "regulation of cell differentiation"
            evidence=ISS] [GO:0042491 "auditory receptor cell differentiation"
            evidence=ISS] [GO:0031641 "regulation of myelination" evidence=ISS]
            [GO:0030513 "positive regulation of BMP signaling pathway"
            evidence=ISS] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0043010 "camera-type eye
            development" evidence=ISS] [GO:2000737 "negative regulation of stem
            cell differentiation" evidence=ISS] [GO:0007420 "brain development"
            evidence=ISS] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0007219 "Notch signaling pathway"
            evidence=ISS] [GO:0051216 "cartilage development" evidence=ISS]
            [GO:0048661 "positive regulation of smooth muscle cell
            proliferation" evidence=ISS] [GO:0046427 "positive regulation of
            JAK-STAT cascade" evidence=ISS] [GO:0042517 "positive regulation of
            tyrosine phosphorylation of Stat3 protein" evidence=ISS]
            [GO:0002062 "chondrocyte differentiation" evidence=ISS] [GO:0048708
            "astrocyte differentiation" evidence=ISS] [GO:0006461 "protein
            complex assembly" evidence=ISS] [GO:2000974 "negative regulation of
            pro-B cell differentiation" evidence=ISS] [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=ISS] [GO:0022010 "central nervous system myelination"
            evidence=ISS] [GO:0021915 "neural tube development" evidence=ISS]
            [GO:0021781 "glial cell fate commitment" evidence=ISS] [GO:0021537
            "telencephalon development" evidence=ISS] [GO:0014003
            "oligodendrocyte development" evidence=ISS] [GO:0007224 "smoothened
            signaling pathway" evidence=ISS] [GO:0007155 "cell adhesion"
            evidence=ISS] [GO:0001078 "RNA polymerase II core promoter proximal
            region sequence-specific DNA binding transcription factor activity
            involved in negative regulation of transcription" evidence=ISS]
            [GO:0048715 "negative regulation of oligodendrocyte
            differentiation" evidence=ISS] [GO:0048712 "negative regulation of
            astrocyte differentiation" evidence=ISS] [GO:2000981 "negative
            regulation of inner ear receptor cell differentiation"
            evidence=IEA] [GO:0097150 "neuronal stem cell maintenance"
            evidence=IEA] [GO:0072282 "metanephric nephron tubule
            morphogenesis" evidence=IEA] [GO:0072086 "specification of loop of
            Henle identity" evidence=IEA] [GO:0072050 "S-shaped body
            morphogenesis" evidence=IEA] [GO:0072049 "comma-shaped body
            morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0045747 "positive regulation of Notch signaling pathway"
            evidence=IEA] [GO:0042668 "auditory receptor cell fate
            determination" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 GO:GO:0005634 GO:GO:0045893
            GO:GO:0006461 GO:GO:0003677 GO:GO:0001078 GO:GO:0048661
            GO:GO:0045944 GO:GO:0045665 GO:GO:0007155 GO:GO:0007219
            GO:GO:0045747 GO:GO:0043010 GO:GO:0030513 GO:GO:0051216
            GO:GO:0022010 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0021915
            GO:GO:0007224 GO:GO:0042517 GO:GO:0048712 GO:GO:0042668
            GO:GO:0048469 InterPro:IPR018352 SMART:SM00511 GO:GO:0021537
            GO:GO:0048715 GO:GO:0031641 GO:GO:0042491 GO:GO:0097150
            GeneTree:ENSGT00700000104168 GO:GO:0048708 HOGENOM:HOG000236346
            HOVERGEN:HBG005960 GO:GO:2000974 GO:GO:0072049 GO:GO:0072282
            GO:GO:2000737 GO:GO:0072050 CTD:388585 eggNOG:NOG83691 KO:K06055
            OMA:QFLTLHS GO:GO:0021781 GO:GO:2000981 GO:GO:0072086
            EMBL:DAAA02043208 EMBL:BC146153 IPI:IPI00699910
            RefSeq:NP_001098937.1 UniGene:Bt.37917 STRING:A6H787
            Ensembl:ENSBTAT00000003221 GeneID:787633 KEGG:bta:787633
            InParanoid:A6H787 NextBio:20928586 Uniprot:A6H787
        Length = 165

 Score = 153 (58.9 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
 Identities = 39/104 (37%), Positives = 55/104 (52%)

Query:   256 SPPLVASSNSIPPALKRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKAD 315
             +P  VA     P    R  KP++EK RR RIN S+  LK L+L+     +  +SKLEKAD
Sbjct:     2 APSTVAVELLSPKEKNRLRKPVVEKMRRDRINSSIEQLK-LLLEQEFARHQPNSKLEKAD 60

Query:   316 ILELTVRHLQRQKILSS------DIRSKYKAGYEECSREVSRFL 353
             ILE+ V +L+  K  ++       +   Y  GY  C +E  +FL
Sbjct:    61 ILEMAVSYLKHSKAFAAAAAGPKSLHQDYSEGYSWCLQEAVQFL 104

 Score = 49 (22.3 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
 Identities = 13/50 (26%), Positives = 22/50 (44%)

Query:   535 ILPNYMAP--STSPPCKDDLKSSPPPLSNLDQPLDFSIKRDD--SMWRPW 580
             +L ++  P  +T+ P K+    SP P     +    +  R     +WRPW
Sbjct:   116 LLYHFQRPPAATAAPAKEPKAPSPAPAPAPAKAATAAAARQPVCGLWRPW 165


>RGD|621340 [details] [associations]
            symbol:Hes5 "hairy and enhancer of split 5 (Drosophila)"
            species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
            of transcription from RNA polymerase II promoter" evidence=ISO;IDA]
            [GO:0001078 "RNA polymerase II core promoter proximal region
            sequence-specific DNA binding transcription factor activity
            involved in negative regulation of transcription" evidence=ISO;ISS]
            [GO:0002062 "chondrocyte differentiation" evidence=ISO;ISS]
            [GO:0003682 "chromatin binding" evidence=IDA] [GO:0003690
            "double-stranded DNA binding" evidence=IDA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006461 "protein complex assembly"
            evidence=ISO;ISS] [GO:0007155 "cell adhesion" evidence=ISO;ISS]
            [GO:0007219 "Notch signaling pathway" evidence=ISO;ISS] [GO:0007224
            "smoothened signaling pathway" evidence=ISO;ISS] [GO:0007420 "brain
            development" evidence=ISO;ISS] [GO:0008284 "positive regulation of
            cell proliferation" evidence=ISO;ISS] [GO:0014003 "oligodendrocyte
            development" evidence=ISO;ISS] [GO:0021537 "telencephalon
            development" evidence=ISO;ISS] [GO:0021781 "glial cell fate
            commitment" evidence=ISO;ISS] [GO:0021861 "forebrain radial glial
            cell differentiation" evidence=IDA] [GO:0021915 "neural tube
            development" evidence=ISO;ISS] [GO:0022010 "central nervous system
            myelination" evidence=ISO;ISS] [GO:0030182 "neuron differentiation"
            evidence=IEP] [GO:0030513 "positive regulation of BMP signaling
            pathway" evidence=ISO;ISS] [GO:0031641 "regulation of myelination"
            evidence=ISO;ISS] [GO:0042491 "auditory receptor cell
            differentiation" evidence=ISO;ISS] [GO:0042517 "positive regulation
            of tyrosine phosphorylation of Stat3 protein" evidence=ISO;ISS]
            [GO:0042668 "auditory receptor cell fate determination"
            evidence=IEA;ISO] [GO:0043010 "camera-type eye development"
            evidence=ISO;ISS] [GO:0045595 "regulation of cell differentiation"
            evidence=ISO;ISS] [GO:0045665 "negative regulation of neuron
            differentiation" evidence=ISO;ISS] [GO:0045747 "positive regulation
            of Notch signaling pathway" evidence=IEA;ISO] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=ISO;IDA]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=ISO;ISS] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0046427
            "positive regulation of JAK-STAT cascade" evidence=ISO;ISS]
            [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0048469 "cell maturation" evidence=ISO;ISS] [GO:0048661
            "positive regulation of smooth muscle cell proliferation"
            evidence=ISO;ISS] [GO:0048708 "astrocyte differentiation"
            evidence=ISO;ISS] [GO:0048712 "negative regulation of astrocyte
            differentiation" evidence=ISO;ISS] [GO:0048715 "negative regulation
            of oligodendrocyte differentiation" evidence=ISO;ISS] [GO:0050767
            "regulation of neurogenesis" evidence=ISO;ISS] [GO:0051216
            "cartilage development" evidence=ISO;ISS] [GO:0072049 "comma-shaped
            body morphogenesis" evidence=IEA] [GO:0072050 "S-shaped body
            morphogenesis" evidence=IEA] [GO:0072086 "specification of loop of
            Henle identity" evidence=IEA] [GO:0072282 "metanephric nephron
            tubule morphogenesis" evidence=IEA] [GO:0097150 "neuronal stem cell
            maintenance" evidence=ISO;IDA] [GO:2000737 "negative regulation of
            stem cell differentiation" evidence=ISO;ISS] [GO:2000974 "negative
            regulation of pro-B cell differentiation" evidence=IMP] [GO:2000978
            "negative regulation of forebrain neuron differentiation"
            evidence=IDA] [GO:2000981 "negative regulation of inner ear
            receptor cell differentiation" evidence=IEA;ISO] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 RGD:621340 GO:GO:0005634
            GO:GO:0045893 GO:GO:0006461 GO:GO:0001078 GO:GO:0048661
            GO:GO:0045944 GO:GO:0007155 GO:GO:0007219 GO:GO:0045747
            GO:GO:0003682 GO:GO:0043010 GO:GO:0003690 GO:GO:0030513
            GO:GO:0051216 GO:GO:0022010 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GO:GO:0021915 GO:GO:0007224 GO:GO:0042517 GO:GO:0048712
            GO:GO:0042668 GO:GO:0048469 InterPro:IPR018352 SMART:SM00511
            GO:GO:0021537 GO:GO:0048715 GO:GO:0031641 GO:GO:0042491
            GO:GO:0097150 GO:GO:0021861 GeneTree:ENSGT00700000104168
            GO:GO:0048708 HOGENOM:HOG000236346 HOVERGEN:HBG005960 GO:GO:2000978
            GO:GO:2000974 GO:GO:0072049 GO:GO:0072282 GO:GO:2000737
            GO:GO:0072050 CTD:388585 eggNOG:NOG83691 KO:K06055 OMA:QFLTLHS
            OrthoDB:EOG495ZT5 GO:GO:0021781 GO:GO:2000981 GO:GO:0072086
            EMBL:D12516 IPI:IPI00206887 PIR:A45119 RefSeq:NP_077359.1
            UniGene:Rn.22422 ProteinModelPortal:Q03062 MINT:MINT-3376257
            STRING:Q03062 PRIDE:Q03062 Ensembl:ENSRNOT00000018769 GeneID:79225
            KEGG:rno:79225 InParanoid:Q03062 NextBio:614656
            Genevestigator:Q03062 GermOnline:ENSRNOG00000013850 Uniprot:Q03062
        Length = 166

 Score = 156 (60.0 bits), Expect = 6.1e-13, Sum P(2) = 6.1e-13
 Identities = 39/103 (37%), Positives = 55/103 (53%)

Query:   256 SPPLVASSNSIPPALKRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKAD 315
             +P  VA     P    R  KP++EK RR RIN S+  LK L+L+     +  +SKLEKAD
Sbjct:     2 APSTVAVEMLSPKEKNRLRKPVVEKMRRDRINSSIEQLK-LLLEQEFARHQPNSKLEKAD 60

Query:   316 ILELTVRHLQRQKILSS-----DIRSKYKAGYEECSREVSRFL 353
             ILE+ V +L+  K  ++      +   Y  GY  C +E  +FL
Sbjct:    61 ILEMAVSYLKHSKAFAAAAGPKSLHQDYSEGYSWCLQEAVQFL 103

 Score = 43 (20.2 bits), Expect = 6.1e-13, Sum P(2) = 6.1e-13
 Identities = 14/57 (24%), Positives = 24/57 (42%)

Query:   529 DGQVVFILPNYMAPSTSPPCKDDLK--SSPPPL-SNLDQPLDFSIKRDDS--MWRPW 580
             D Q+  +      P+ + P K+     ++P P  S+       S  R  +  +WRPW
Sbjct:   110 DTQMKLLYHFQRPPAPAAPVKETPTPGAAPQPARSSTKAAASVSTSRQSACGLWRPW 166


>WB|WBGene00003008 [details] [associations]
            symbol:lin-22 species:6239 "Caenorhabditis elegans"
            [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=IMP] [GO:0009957 "epidermal cell fate specification"
            evidence=IMP] [GO:0045138 "tail tip morphogenesis" evidence=IMP]
            [GO:0010629 "negative regulation of gene expression" evidence=IMP]
            [GO:0000981 "sequence-specific DNA binding RNA polymerase II
            transcription factor activity" evidence=ISS] [GO:0005634 "nucleus"
            evidence=ISS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
            SMART:SM00353 GO:GO:0005634 GO:GO:0009952 GO:GO:0000981
            GO:GO:0010629 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0045138
            HSSP:P61244 GO:GO:0009957 EMBL:FO081809 EMBL:AF020555 PIR:T42235
            RefSeq:NP_500281.1 UniGene:Cel.19687 ProteinModelPortal:G5EF76
            SMR:G5EF76 EnsemblMetazoa:Y54G2A.1 GeneID:177082
            KEGG:cel:CELE_Y54G2A.1 CTD:177082 WormBase:Y54G2A.1 OMA:TMESKPI
            NextBio:895262 Uniprot:G5EF76
        Length = 173

 Score = 160 (61.4 bits), Expect = 7.4e-13, Sum P(2) = 7.4e-13
 Identities = 33/67 (49%), Positives = 45/67 (67%)

Query:   260 VASSNSIPPALKRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILEL 319
             + S   I    K  NKPLMEK+RRARIN+SL+ LK +++      + +HSK EKADILE+
Sbjct:    11 IESDGGISRCKKIKNKPLMEKKRRARINKSLSQLKQILIQDEHKNSIQHSKWEKADILEM 70

Query:   320 TVRHLQR 326
              V +LQ+
Sbjct:    71 AVEYLQQ 77

 Score = 38 (18.4 bits), Expect = 7.4e-13, Sum P(2) = 7.4e-13
 Identities = 9/35 (25%), Positives = 19/35 (54%)

Query:   526 RLPDGQVVFILPNYMAPSTSPPCKDDLKSSPPPLS 560
             +L   Q   + P+  + ST P  K+++++   PL+
Sbjct:    77 QLRSAQPCSLSPSTSSISTPPTPKEEIRNIKVPLN 111


>UNIPROTKB|G5EF76 [details] [associations]
            symbol:lin-22 "Protein LIN-22" species:6239 "Caenorhabditis
            elegans" [GO:0006366 "transcription from RNA polymerase II
            promoter" evidence=ISS] [GO:0006357 "regulation of transcription
            from RNA polymerase II promoter" evidence=ISS] InterPro:IPR011598
            Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
            GO:GO:0009952 GO:GO:0000981 GO:GO:0010629 Gene3D:4.10.280.10
            SUPFAM:SSF47459 GO:GO:0045138 HSSP:P61244 GO:GO:0009957
            EMBL:FO081809 EMBL:AF020555 PIR:T42235 RefSeq:NP_500281.1
            UniGene:Cel.19687 ProteinModelPortal:G5EF76 SMR:G5EF76
            EnsemblMetazoa:Y54G2A.1 GeneID:177082 KEGG:cel:CELE_Y54G2A.1
            CTD:177082 WormBase:Y54G2A.1 OMA:TMESKPI NextBio:895262
            Uniprot:G5EF76
        Length = 173

 Score = 160 (61.4 bits), Expect = 7.4e-13, Sum P(2) = 7.4e-13
 Identities = 33/67 (49%), Positives = 45/67 (67%)

Query:   260 VASSNSIPPALKRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILEL 319
             + S   I    K  NKPLMEK+RRARIN+SL+ LK +++      + +HSK EKADILE+
Sbjct:    11 IESDGGISRCKKIKNKPLMEKKRRARINKSLSQLKQILIQDEHKNSIQHSKWEKADILEM 70

Query:   320 TVRHLQR 326
              V +LQ+
Sbjct:    71 AVEYLQQ 77

 Score = 38 (18.4 bits), Expect = 7.4e-13, Sum P(2) = 7.4e-13
 Identities = 9/35 (25%), Positives = 19/35 (54%)

Query:   526 RLPDGQVVFILPNYMAPSTSPPCKDDLKSSPPPLS 560
             +L   Q   + P+  + ST P  K+++++   PL+
Sbjct:    77 QLRSAQPCSLSPSTSSISTPPTPKEEIRNIKVPLN 111


>UNIPROTKB|Q5D212 [details] [associations]
            symbol:HES5 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
            "protein dimerization activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0001078 "RNA polymerase II core promoter proximal
            region sequence-specific DNA binding transcription factor activity
            involved in negative regulation of transcription" evidence=IEA]
            [GO:0006461 "protein complex assembly" evidence=IEA] [GO:0007155
            "cell adhesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
            evidence=IEA] [GO:0007224 "smoothened signaling pathway"
            evidence=IEA] [GO:0021537 "telencephalon development" evidence=IEA]
            [GO:0021781 "glial cell fate commitment" evidence=IEA] [GO:0021915
            "neural tube development" evidence=IEA] [GO:0022010 "central
            nervous system myelination" evidence=IEA] [GO:0030513 "positive
            regulation of BMP signaling pathway" evidence=IEA] [GO:0031641
            "regulation of myelination" evidence=IEA] [GO:0042517 "positive
            regulation of tyrosine phosphorylation of Stat3 protein"
            evidence=IEA] [GO:0042668 "auditory receptor cell fate
            determination" evidence=IEA] [GO:0043010 "camera-type eye
            development" evidence=IEA] [GO:0045747 "positive regulation of
            Notch signaling pathway" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0048469 "cell maturation" evidence=IEA]
            [GO:0048661 "positive regulation of smooth muscle cell
            proliferation" evidence=IEA] [GO:0048708 "astrocyte
            differentiation" evidence=IEA] [GO:0048712 "negative regulation of
            astrocyte differentiation" evidence=IEA] [GO:0048715 "negative
            regulation of oligodendrocyte differentiation" evidence=IEA]
            [GO:0051216 "cartilage development" evidence=IEA] [GO:0072049
            "comma-shaped body morphogenesis" evidence=IEA] [GO:0072050
            "S-shaped body morphogenesis" evidence=IEA] [GO:0072086
            "specification of loop of Henle identity" evidence=IEA] [GO:0072282
            "metanephric nephron tubule morphogenesis" evidence=IEA]
            [GO:0097150 "neuronal stem cell maintenance" evidence=IEA]
            [GO:2000737 "negative regulation of stem cell differentiation"
            evidence=IEA] [GO:2000981 "negative regulation of inner ear
            receptor cell differentiation" evidence=IEA] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 GO:GO:0005634 GO:GO:0006461
            GO:GO:0003677 GO:GO:0001078 GO:GO:0048661 GO:GO:0045944
            GO:GO:0007155 GO:GO:0007219 GO:GO:0045747 GO:GO:0030513
            Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0007224 GO:GO:0042517
            GO:GO:0031641 GeneTree:ENSGT00700000104168 HOGENOM:HOG000236346
            HOVERGEN:HBG005960 GO:GO:2000737 CTD:388585 eggNOG:NOG83691
            KO:K06055 OMA:QFLTLHS OrthoDB:EOG495ZT5 EMBL:AADN02040879
            EMBL:AY916777 IPI:IPI00595214 RefSeq:NP_001012713.1
            UniGene:Gga.11242 Ensembl:ENSGALT00000001715 GeneID:419392
            KEGG:gga:419392 InParanoid:Q5D212 NextBio:20822454 Uniprot:Q5D212
        Length = 157

 Score = 154 (59.3 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
 Identities = 40/100 (40%), Positives = 57/100 (57%)

Query:   258 PLVASSNSIPPALK-RANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADI 316
             P   S   + P  K R  KP++EK RR RIN S+  LK L+L+     +  +SKLEKADI
Sbjct:     3 PSALSLEILTPKEKNRLRKPIVEKLRRDRINSSIEQLK-LLLEKEFQRHQPNSKLEKADI 61

Query:   317 LELTVRHLQRQKILSSDIRS---KYKAGYEECSREVSRFL 353
             LE+TV +L+  +  ++  +S    Y  GY  C +E  +FL
Sbjct:    62 LEMTVSYLKYSRAFAASAKSLQQDYCEGYAWCLKEALQFL 101

 Score = 43 (20.2 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
 Identities = 9/28 (32%), Positives = 14/28 (50%)

Query:   555 SPPPLSNLDQPL--DFSIKRDDSMWRPW 580
             SP   ++  QP      +K   ++WRPW
Sbjct:   130 SPSASTSTHQPSAKQTPVKPSCNLWRPW 157


>UNIPROTKB|Q5TA89 [details] [associations]
            symbol:HES5 "Transcription factor HES-5" species:9606 "Homo
            sapiens" [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003690
            "double-stranded DNA binding" evidence=IEA] [GO:0021861 "forebrain
            radial glial cell differentiation" evidence=IEA] [GO:0042668
            "auditory receptor cell fate determination" evidence=IEA]
            [GO:0045747 "positive regulation of Notch signaling pathway"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0072049
            "comma-shaped body morphogenesis" evidence=IEA] [GO:0072050
            "S-shaped body morphogenesis" evidence=IEA] [GO:0072086
            "specification of loop of Henle identity" evidence=IEA] [GO:0072282
            "metanephric nephron tubule morphogenesis" evidence=IEA]
            [GO:2000978 "negative regulation of forebrain neuron
            differentiation" evidence=IEA] [GO:2000981 "negative regulation of
            inner ear receptor cell differentiation" evidence=IEA] [GO:0048661
            "positive regulation of smooth muscle cell proliferation"
            evidence=IGI] [GO:0007219 "Notch signaling pathway"
            evidence=IMP;TAS] [GO:0048712 "negative regulation of astrocyte
            differentiation" evidence=ISS] [GO:0048715 "negative regulation of
            oligodendrocyte differentiation" evidence=ISS] [GO:0001078 "RNA
            polymerase II core promoter proximal region sequence-specific DNA
            binding transcription factor activity involved in negative
            regulation of transcription" evidence=ISS] [GO:0007155 "cell
            adhesion" evidence=ISS] [GO:0007224 "smoothened signaling pathway"
            evidence=ISS] [GO:0014003 "oligodendrocyte development"
            evidence=ISS] [GO:0021537 "telencephalon development" evidence=ISS]
            [GO:0021781 "glial cell fate commitment" evidence=ISS] [GO:0021915
            "neural tube development" evidence=ISS] [GO:0022010 "central
            nervous system myelination" evidence=ISS] [GO:0030513 "positive
            regulation of BMP signaling pathway" evidence=ISS] [GO:0031641
            "regulation of myelination" evidence=ISS] [GO:0042491 "auditory
            receptor cell differentiation" evidence=ISS] [GO:0045595
            "regulation of cell differentiation" evidence=ISS] [GO:0045665
            "negative regulation of neuron differentiation" evidence=ISS]
            [GO:0048469 "cell maturation" evidence=ISS] [GO:0050767 "regulation
            of neurogenesis" evidence=ISS] [GO:2000974 "negative regulation of
            pro-B cell differentiation" evidence=ISS] [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=ISS] [GO:0006461 "protein complex assembly" evidence=ISS]
            [GO:0048708 "astrocyte differentiation" evidence=ISS] [GO:0002062
            "chondrocyte differentiation" evidence=ISS] [GO:0042517 "positive
            regulation of tyrosine phosphorylation of Stat3 protein"
            evidence=ISS] [GO:0046427 "positive regulation of JAK-STAT cascade"
            evidence=ISS] [GO:0051216 "cartilage development" evidence=IDA]
            [GO:0008284 "positive regulation of cell proliferation"
            evidence=IMP] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0007420 "brain development"
            evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0097150 "neuronal stem cell maintenance" evidence=IEP]
            [GO:2000737 "negative regulation of stem cell differentiation"
            evidence=IMP] [GO:0043010 "camera-type eye development"
            evidence=ISS] [GO:0008134 "transcription factor binding"
            evidence=NAS] [GO:0005654 "nucleoplasm" evidence=TAS]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 Reactome:REACT_111102
            GO:GO:0045893 GO:GO:0005654 GO:GO:0006461 GO:GO:0001078
            GO:GO:0048661 GO:GO:0045944 GO:GO:0045665 GO:GO:0007155
            GO:GO:0007219 GO:GO:0045747 GO:GO:0003682 GO:GO:0043010
            EMBL:CH471183 GO:GO:0003690 GO:GO:0030513 GO:GO:0051216
            GO:GO:0022010 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0008134
            GO:GO:0021915 GO:GO:0007224 GO:GO:0042517 GO:GO:0048712
            GO:GO:0042668 GO:GO:0048469 GO:GO:0021537 GO:GO:0048715
            GO:GO:0031641 GO:GO:0042491 GO:GO:0097150 GO:GO:0048708
            HOGENOM:HOG000236346 HOVERGEN:HBG005960 GO:GO:2000974 GO:GO:0072049
            GO:GO:0072282 GO:GO:2000737 GO:GO:0072050 EMBL:DQ272660
            EMBL:AL139246 IPI:IPI00373977 RefSeq:NP_001010926.1
            UniGene:Hs.57971 ProteinModelPortal:Q5TA89 SMR:Q5TA89 STRING:Q5TA89
            PhosphoSite:Q5TA89 DMDM:74745795 PRIDE:Q5TA89
            Ensembl:ENST00000378453 GeneID:388585 KEGG:hsa:388585
            UCSC:uc001ajn.3 CTD:388585 GeneCards:GC01M002450 HGNC:HGNC:19764
            MIM:607348 neXtProt:NX_Q5TA89 PharmGKB:PA134967985 eggNOG:NOG83691
            InParanoid:Q5TA89 KO:K06055 OMA:QFLTLHS OrthoDB:EOG495ZT5
            GenomeRNAi:388585 NextBio:102194 Bgee:Q5TA89 CleanEx:HS_HES5
            Genevestigator:Q5TA89 GO:GO:0021781 GO:GO:2000981 GO:GO:0072086
            Uniprot:Q5TA89
        Length = 166

 Score = 152 (58.6 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
 Identities = 39/103 (37%), Positives = 54/103 (52%)

Query:   256 SPPLVASSNSIPPALKRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKAD 315
             +P  VA     P    R  KP++EK RR RIN S+  LK L+L+     +  +SKLEKAD
Sbjct:     2 APSTVAVELLSPKEKNRLRKPVVEKMRRDRINSSIEQLK-LLLEQEFARHQPNSKLEKAD 60

Query:   316 ILELTVRHLQRQKILSS-----DIRSKYKAGYEECSREVSRFL 353
             ILE+ V +L+  K   +      +   Y  GY  C +E  +FL
Sbjct:    61 ILEMAVSYLKHSKAFVAAAGPKSLHQDYSEGYSWCLQEAVQFL 103

 Score = 44 (20.5 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
 Identities = 12/52 (23%), Positives = 23/52 (44%)

Query:   535 ILPNYMAPSTSP--PCKDDLK--SSPPPLSNLDQPLDFSIKRDDS--MWRPW 580
             +L ++  P  +P  P K+     ++PPP  +       +     +  +WRPW
Sbjct:   115 LLYHFQRPPAAPAAPAKEPKAPGAAPPPALSAKATAAAAAAHQPACGLWRPW 166


>UNIPROTKB|Q8UW74 [details] [associations]
            symbol:hes7.1-a "Transcription factor HES-7.1-A"
            species:8355 "Xenopus laevis" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IMP]
            [GO:0005634 "nucleus" evidence=ISS] [GO:0030917 "midbrain-hindbrain
            boundary development" evidence=IMP] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=IMP]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0005634
            GO:GO:0003677 GO:GO:0006351 GO:GO:0000122 Gene3D:4.10.280.10
            SUPFAM:SSF47459 GO:GO:0030917 EMBL:AB071432 EMBL:AB071433
            EMBL:BC170054 ProteinModelPortal:Q8UW74 Uniprot:Q8UW74
        Length = 180

 Score = 174 (66.3 bits), Expect = 1.6e-12, P = 1.6e-12
 Identities = 36/89 (40%), Positives = 58/89 (65%)

Query:   275 KPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQRQKILSSD- 333
             KPL+EKRRR RIN SL  L+  +  + K+E  K+ K+EKA+ILE TV+ LQ +K+L  D 
Sbjct:    18 KPLVEKRRRERINNSLEKLRIFLFQTLKSEKLKNPKVEKAEILECTVQFLQSRKLLPLDR 77

Query:   334 --IRSKYKAGYEECSREVSRFLET-PELH 359
               +  +Y++G++ C      F+ + P+++
Sbjct:    78 EAVDKEYQSGFQHCLETTLHFMNSKPDMN 106


>UNIPROTKB|K7EJQ0 [details] [associations]
            symbol:HES2 "Transcription factor HES-2" species:9606 "Homo
            sapiens" [GO:0046983 "protein dimerization activity" evidence=IEA]
            InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
            Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL031848 HGNC:HGNC:16005
            Ensembl:ENST00000489730 Uniprot:K7EJQ0
        Length = 82

 Score = 172 (65.6 bits), Expect = 2.6e-12, P = 2.6e-12
 Identities = 37/56 (66%), Positives = 45/56 (80%)

Query:   270 LKRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQ 325
             L+++ KPL+EKRRRARINQSL+ LK LIL     EN+  SKLEKAD+LE+TVR LQ
Sbjct:    13 LRKSLKPLLEKRRRARINQSLSQLKGLILPLLGRENSNCSKLEKADVLEMTVRFLQ 68


>UNIPROTKB|Q8UW72 [details] [associations]
            symbol:hes7.1-b "Transcription factor HES-7.1-B"
            species:8355 "Xenopus laevis" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IMP]
            [GO:0005634 "nucleus" evidence=ISS] [GO:0030917 "midbrain-hindbrain
            boundary development" evidence=ISS] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=ISS]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0005634
            GO:GO:0003677 GO:GO:0006351 GO:GO:0000122 Gene3D:4.10.280.10
            SUPFAM:SSF47459 GO:GO:0030917 EMBL:AB071434 RefSeq:NP_001082175.1
            UniGene:Xl.12126 ProteinModelPortal:Q8UW72 GeneID:398267
            KEGG:xla:398267 CTD:398267 Xenbase:XB-GENE-876475 Uniprot:Q8UW72
        Length = 180

 Score = 172 (65.6 bits), Expect = 2.6e-12, P = 2.6e-12
 Identities = 36/89 (40%), Positives = 58/89 (65%)

Query:   275 KPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQRQKILSSD- 333
             KPL+EKRRR RIN SL  L+  +  + K+E  K+ K+EKA+ILE TV+ LQ +K+L  D 
Sbjct:    18 KPLVEKRRRERINNSLEKLRIFLSQTLKSEKLKNPKVEKAEILECTVQFLQSRKLLPLDR 77

Query:   334 --IRSKYKAGYEECSREVSRFLET-PELH 359
               +  +Y++G++ C      F+ + P+++
Sbjct:    78 EAVDKEYQSGFQHCLETTLHFMNSKPDMN 106


>FB|FBgn0002735 [details] [associations]
            symbol:E(spl)mgamma-HLH "Enhancer of split mgamma,
            helix-loop-helix" species:7227 "Drosophila melanogaster"
            [GO:0005634 "nucleus" evidence=IC;NAS] [GO:0003677 "DNA binding"
            evidence=ISS;NAS] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=ISS;IMP;IDA;TAS]
            [GO:0043565 "sequence-specific DNA binding" evidence=IDA]
            [GO:0048749 "compound eye development" evidence=TAS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=TAS] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=NAS] [GO:0007399 "nervous system
            development" evidence=NAS] [GO:0007219 "Notch signaling pathway"
            evidence=NAS] [GO:0008134 "transcription factor binding"
            evidence=IGI] [GO:0046983 "protein dimerization activity"
            evidence=IEA] [GO:0048190 "wing disc dorsal/ventral pattern
            formation" evidence=IGI] [GO:0002052 "positive regulation of
            neuroblast proliferation" evidence=IMP] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 EMBL:AE014297 GO:GO:0005634
            GO:GO:0048190 GO:GO:0043565 GO:GO:0007219 GO:GO:0003700
            GO:GO:0006351 GO:GO:0000122 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GO:GO:0008134 GO:GO:0048749 GO:GO:0002052 InterPro:IPR018352
            SMART:SM00511 GeneTree:ENSGT00700000104130 KO:K09090 EMBL:AY779906
            EMBL:AY779907 EMBL:AY779908 EMBL:AY779909 EMBL:AY779910
            EMBL:AY779911 EMBL:AY779912 EMBL:AY779913 EMBL:AY779914
            EMBL:AY779915 EMBL:AY779916 EMBL:AY779917 EMBL:AY779918
            EMBL:AY779919 EMBL:AY779920 EMBL:AY779921 OrthoDB:EOG4J3V0B
            EMBL:X67049 EMBL:M96167 EMBL:AJ276315 EMBL:BT022125 PIR:B46177
            RefSeq:NP_524504.2 UniGene:Dm.1339 ProteinModelPortal:Q01070
            SMR:Q01070 DIP:DIP-723N IntAct:Q01070 STRING:Q01070 PRIDE:Q01070
            EnsemblMetazoa:FBtr0084955 GeneID:43151 KEGG:dme:Dmel_CG8333
            CTD:43151 FlyBase:FBgn0002735 eggNOG:NOG256051 InParanoid:Q01070
            OMA:ESEGEHV PhylomeDB:Q01070 GenomeRNAi:43151 NextBio:832432
            Bgee:Q01070 GermOnline:CG8333 Uniprot:Q01070
        Length = 205

 Score = 152 (58.6 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
 Identities = 39/103 (37%), Positives = 62/103 (60%)

Query:   271 KRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQRQKIL 330
             ++  KP++E++RRARIN+ L  LK L++ + ++E    ++LEKADILELTV HLQ+ K  
Sbjct:    16 RKVMKPMLERKRRARINKCLDELKDLMVATLESEGEHVTRLEKADILELTVTHLQKMKQQ 75

Query:   331 SSDIRSK----------YKAGYEECSREVSRFL-ETPELHLGL 362
                 R+           +++GY     EVSR L + P +++ L
Sbjct:    76 RQHKRASGDESLTPAEGFRSGYIHAVNEVSRSLSQLPGMNVSL 118

 Score = 41 (19.5 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
 Identities = 8/35 (22%), Positives = 19/35 (54%)

Query:   547 PCKDDLKSSPPPLSNLD-QPLDFSIKRDDSMWRPW 580
             P  +   +S   L+ +D   ++   + ++++WRPW
Sbjct:   171 PNSNTSSTSHSLLTTIDVTKMEDDSEDEENVWRPW 205


>UNIPROTKB|F1NWS0 [details] [associations]
            symbol:F1NWS0 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR003650 Pfam:PF07527 PROSITE:PS51054 GO:GO:0006355
            GO:GO:0003677 InterPro:IPR018352 SMART:SM00511
            GeneTree:ENSGT00700000104168 EMBL:AADN02040837 EMBL:AADN02040838
            IPI:IPI01017247 Ensembl:ENSGALT00000040166 ArrayExpress:F1NWS0
            Uniprot:F1NWS0
        Length = 219

 Score = 145 (56.1 bits), Expect = 3.7e-12, Sum P(3) = 3.7e-12
 Identities = 33/61 (54%), Positives = 45/61 (73%)

Query:   305 NTKHSKLEKADILELTVRHL---QRQKI---LSSD--IRSKYKAGYEECSREVSRFLETP 356
             +++HSKLEKADILE+TV+HL   QR ++   LS+D  +  KY+AG+ EC  EV+RFL T 
Sbjct:     1 SSRHSKLEKADILEMTVKHLRNLQRAQMAAALSADPSVLGKYRAGFNECMNEVTRFLSTC 60

Query:   357 E 357
             E
Sbjct:    61 E 61

 Score = 54 (24.1 bits), Expect = 3.7e-12, Sum P(3) = 3.7e-12
 Identities = 12/27 (44%), Positives = 16/27 (59%)

Query:   521 QLIPSRLPDGQVVFILPNYMAPSTSPP 547
             QL+P+   DGQ  F++PN   P  S P
Sbjct:   136 QLVPAT--DGQFAFLIPNPAFPPGSGP 160

 Score = 50 (22.7 bits), Expect = 9.4e-12, Sum P(3) = 9.4e-12
 Identities = 12/39 (30%), Positives = 19/39 (48%)

Query:   542 PSTSPPCKDDLKSSPPPLSNLDQPLDFSIKRDDSMWRPW 580
             P + P    D+  +  P S    P+    +R +S+WRPW
Sbjct:   184 PISIPGAGLDIIWAVVPASQAGSPI---AERRESVWRPW 219

 Score = 46 (21.3 bits), Expect = 3.7e-12, Sum P(3) = 3.7e-12
 Identities = 8/20 (40%), Positives = 13/20 (65%)

Query:   403 IDSGVRQRLFRHLENCMSEI 422
             +++ VR RL  HL  C+ +I
Sbjct:    63 VNADVRARLLGHLSACLGQI 82


>UNIPROTKB|Q28HA8 [details] [associations]
            symbol:hes7.1 "Transcription factor HES-7.1" species:8364
            "Xenopus (Silurana) tropicalis" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISS] [GO:0030917 "midbrain-hindbrain
            boundary development" evidence=ISS] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=ISS]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0005634
            GO:GO:0003677 GO:GO:0006351 GO:GO:0000122 Gene3D:4.10.280.10
            SUPFAM:SSF47459 GO:GO:0030917 GO:GO:0001757
            GeneTree:ENSGT00700000104130 CTD:398267 HOGENOM:HOG000236346
            EMBL:CR760960 RefSeq:NP_001039166.1 UniGene:Str.1458
            ProteinModelPortal:Q28HA8 Ensembl:ENSXETT00000019915 GeneID:733997
            KEGG:xtr:733997 Xenbase:XB-GENE-876465 eggNOG:NOG326523 OMA:EILECTV
            OrthoDB:EOG49CQ9D Bgee:Q28HA8 Uniprot:Q28HA8
        Length = 178

 Score = 170 (64.9 bits), Expect = 4.3e-12, P = 4.3e-12
 Identities = 37/96 (38%), Positives = 62/96 (64%)

Query:   269 ALKRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQRQK 328
             A ++  KPL+E+RRR RIN SL  L+  +  + K+E  K+ K+EKA+ILE TV+ LQ  K
Sbjct:    12 AHRKLLKPLVERRRRERINNSLEKLRIFLSQALKSEKLKNPKVEKAEILECTVQFLQSSK 71

Query:   329 IL--SSDIRSK-YKAGYEECSREVSRFLET-PELHL 360
             ++    D+ +K Y++G++ C      F+ + P+L++
Sbjct:    72 LVPQDGDVGNKGYQSGFQHCLETALHFMNSKPDLNV 107


>UNIPROTKB|F1P2S5 [details] [associations]
            symbol:F1P2S5 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0001078 "RNA polymerase II core promoter
            proximal region sequence-specific DNA binding transcription factor
            activity involved in negative regulation of transcription"
            evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
            [GO:0003143 "embryonic heart tube morphogenesis" evidence=IEA]
            [GO:0003266 "regulation of secondary heart field cardioblast
            proliferation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006461 "protein complex
            assembly" evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA]
            [GO:0007219 "Notch signaling pathway" evidence=IEA] [GO:0007224
            "smoothened signaling pathway" evidence=IEA] [GO:0007262 "STAT
            protein import into nucleus" evidence=IEA] [GO:0016477 "cell
            migration" evidence=IEA] [GO:0021537 "telencephalon development"
            evidence=IEA] [GO:0021555 "midbrain-hindbrain boundary
            morphogenesis" evidence=IEA] [GO:0021557 "oculomotor nerve
            development" evidence=IEA] [GO:0021558 "trochlear nerve
            development" evidence=IEA] [GO:0021575 "hindbrain morphogenesis"
            evidence=IEA] [GO:0021984 "adenohypophysis development"
            evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
            [GO:0030513 "positive regulation of BMP signaling pathway"
            evidence=IEA] [GO:0030901 "midbrain development" evidence=IEA]
            [GO:0031016 "pancreas development" evidence=IEA] [GO:0035019
            "somatic stem cell maintenance" evidence=IEA] [GO:0035910
            "ascending aorta morphogenesis" evidence=IEA] [GO:0042102 "positive
            regulation of T cell proliferation" evidence=IEA] [GO:0042517
            "positive regulation of tyrosine phosphorylation of Stat3 protein"
            evidence=IEA] [GO:0042668 "auditory receptor cell fate
            determination" evidence=IEA] [GO:0042803 "protein homodimerization
            activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
            evidence=IEA] [GO:0043388 "positive regulation of DNA binding"
            evidence=IEA] [GO:0045598 "regulation of fat cell differentiation"
            evidence=IEA] [GO:0045608 "negative regulation of auditory receptor
            cell differentiation" evidence=IEA] [GO:0045747 "positive
            regulation of Notch signaling pathway" evidence=IEA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0045977 "positive regulation of mitotic
            cell cycle, embryonic" evidence=IEA] [GO:0046331 "lateral
            inhibition" evidence=IEA] [GO:0048469 "cell maturation"
            evidence=IEA] [GO:0048538 "thymus development" evidence=IEA]
            [GO:0048667 "cell morphogenesis involved in neuron differentiation"
            evidence=IEA] [GO:0048711 "positive regulation of astrocyte
            differentiation" evidence=IEA] [GO:0048715 "negative regulation of
            oligodendrocyte differentiation" evidence=IEA] [GO:0060037
            "pharyngeal system development" evidence=IEA] [GO:0060164
            "regulation of timing of neuron differentiation" evidence=IEA]
            [GO:0060253 "negative regulation of glial cell proliferation"
            evidence=IEA] [GO:0060412 "ventricular septum morphogenesis"
            evidence=IEA] [GO:0060675 "ureteric bud morphogenesis"
            evidence=IEA] [GO:0060716 "labyrinthine layer blood vessel
            development" evidence=IEA] [GO:0061009 "common bile duct
            development" evidence=IEA] [GO:0061106 "negative regulation of
            stomach neuroendocrine cell differentiation" evidence=IEA]
            [GO:0061309 "cardiac neural crest cell development involved in
            outflow tract morphogenesis" evidence=IEA] [GO:0071820 "N-box
            binding" evidence=IEA] [GO:0072012 "glomerulus vasculature
            development" evidence=IEA] [GO:0072049 "comma-shaped body
            morphogenesis" evidence=IEA] [GO:0072050 "S-shaped body
            morphogenesis" evidence=IEA] [GO:0072141 "renal interstitial cell
            development" evidence=IEA] [GO:0072282 "metanephric nephron tubule
            morphogenesis" evidence=IEA] [GO:0090102 "cochlea development"
            evidence=IEA] [GO:0097084 "vascular smooth muscle cell development"
            evidence=IEA] [GO:0097150 "neuronal stem cell maintenance"
            evidence=IEA] [GO:2000227 "negative regulation of pancreatic A cell
            differentiation" evidence=IEA] [GO:2000737 "negative regulation of
            stem cell differentiation" evidence=IEA] [GO:2000974 "negative
            regulation of pro-B cell differentiation" evidence=IEA]
            InterPro:IPR003650 Pfam:PF07527 PROSITE:PS51054 GO:GO:0005634
            GO:GO:0005737 GO:GO:0016477 GO:GO:0006461 GO:GO:0001078
            GO:GO:0045944 GO:GO:0007155 GO:GO:0045747 GO:GO:0030513
            GO:GO:0042102 GO:GO:0046331 GO:GO:0045598 GO:GO:0007224
            GO:GO:0042517 InterPro:IPR018352 SMART:SM00511 GO:GO:0043388
            GO:GO:0003266 GO:GO:0007262 GO:GO:0048505
            GeneTree:ENSGT00700000104168 GO:GO:0071820 GO:GO:2000227
            GO:GO:0061106 EMBL:AADN02040837 EMBL:AADN02040838 IPI:IPI00602379
            Ensembl:ENSGALT00000003195 ArrayExpress:F1P2S5 Uniprot:F1P2S5
        Length = 221

 Score = 145 (56.1 bits), Expect = 4.7e-12, Sum P(3) = 4.7e-12
 Identities = 33/61 (54%), Positives = 45/61 (73%)

Query:   305 NTKHSKLEKADILELTVRHL---QRQKI---LSSD--IRSKYKAGYEECSREVSRFLETP 356
             +++HSKLEKADILE+TV+HL   QR ++   LS+D  +  KY+AG+ EC  EV+RFL T 
Sbjct:     1 SSRHSKLEKADILEMTVKHLRNLQRAQMAAALSADPSVLGKYRAGFNECMNEVTRFLSTC 60

Query:   357 E 357
             E
Sbjct:    61 E 61

 Score = 54 (24.1 bits), Expect = 4.7e-12, Sum P(3) = 4.7e-12
 Identities = 12/27 (44%), Positives = 16/27 (59%)

Query:   521 QLIPSRLPDGQVVFILPNYMAPSTSPP 547
             QL+P+   DGQ  F++PN   P  S P
Sbjct:   136 QLVPAT--DGQFAFLIPNPAFPPGSGP 160

 Score = 51 (23.0 bits), Expect = 9.5e-12, Sum P(3) = 9.5e-12
 Identities = 14/40 (35%), Positives = 18/40 (45%)

Query:   542 PSTSP-PCKDDLKSSPPPLSNLDQPLDFSIKRDDSMWRPW 580
             PS SP         S  P S    P+    +R +S+WRPW
Sbjct:   185 PSASPVQGLTSFGHSVVPASQAGSPI---AERRESVWRPW 221

 Score = 46 (21.3 bits), Expect = 4.7e-12, Sum P(3) = 4.7e-12
 Identities = 8/20 (40%), Positives = 13/20 (65%)

Query:   403 IDSGVRQRLFRHLENCMSEI 422
             +++ VR RL  HL  C+ +I
Sbjct:    63 VNADVRARLLGHLSACLGQI 82


>UNIPROTKB|F1NWR8 [details] [associations]
            symbol:F1NWR8 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0001078 "RNA polymerase II core promoter
            proximal region sequence-specific DNA binding transcription factor
            activity involved in negative regulation of transcription"
            evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
            [GO:0003143 "embryonic heart tube morphogenesis" evidence=IEA]
            [GO:0003266 "regulation of secondary heart field cardioblast
            proliferation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006461 "protein complex
            assembly" evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA]
            [GO:0007219 "Notch signaling pathway" evidence=IEA] [GO:0007224
            "smoothened signaling pathway" evidence=IEA] [GO:0007262 "STAT
            protein import into nucleus" evidence=IEA] [GO:0016477 "cell
            migration" evidence=IEA] [GO:0021537 "telencephalon development"
            evidence=IEA] [GO:0021555 "midbrain-hindbrain boundary
            morphogenesis" evidence=IEA] [GO:0021557 "oculomotor nerve
            development" evidence=IEA] [GO:0021558 "trochlear nerve
            development" evidence=IEA] [GO:0021575 "hindbrain morphogenesis"
            evidence=IEA] [GO:0021984 "adenohypophysis development"
            evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
            [GO:0030513 "positive regulation of BMP signaling pathway"
            evidence=IEA] [GO:0030901 "midbrain development" evidence=IEA]
            [GO:0031016 "pancreas development" evidence=IEA] [GO:0035019
            "somatic stem cell maintenance" evidence=IEA] [GO:0035910
            "ascending aorta morphogenesis" evidence=IEA] [GO:0042102 "positive
            regulation of T cell proliferation" evidence=IEA] [GO:0042517
            "positive regulation of tyrosine phosphorylation of Stat3 protein"
            evidence=IEA] [GO:0042668 "auditory receptor cell fate
            determination" evidence=IEA] [GO:0042803 "protein homodimerization
            activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
            evidence=IEA] [GO:0043388 "positive regulation of DNA binding"
            evidence=IEA] [GO:0045598 "regulation of fat cell differentiation"
            evidence=IEA] [GO:0045608 "negative regulation of auditory receptor
            cell differentiation" evidence=IEA] [GO:0045747 "positive
            regulation of Notch signaling pathway" evidence=IEA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0045977 "positive regulation of mitotic
            cell cycle, embryonic" evidence=IEA] [GO:0046331 "lateral
            inhibition" evidence=IEA] [GO:0048469 "cell maturation"
            evidence=IEA] [GO:0048538 "thymus development" evidence=IEA]
            [GO:0048667 "cell morphogenesis involved in neuron differentiation"
            evidence=IEA] [GO:0048711 "positive regulation of astrocyte
            differentiation" evidence=IEA] [GO:0048715 "negative regulation of
            oligodendrocyte differentiation" evidence=IEA] [GO:0060037
            "pharyngeal system development" evidence=IEA] [GO:0060164
            "regulation of timing of neuron differentiation" evidence=IEA]
            [GO:0060253 "negative regulation of glial cell proliferation"
            evidence=IEA] [GO:0060412 "ventricular septum morphogenesis"
            evidence=IEA] [GO:0060675 "ureteric bud morphogenesis"
            evidence=IEA] [GO:0060716 "labyrinthine layer blood vessel
            development" evidence=IEA] [GO:0061009 "common bile duct
            development" evidence=IEA] [GO:0061106 "negative regulation of
            stomach neuroendocrine cell differentiation" evidence=IEA]
            [GO:0061309 "cardiac neural crest cell development involved in
            outflow tract morphogenesis" evidence=IEA] [GO:0071820 "N-box
            binding" evidence=IEA] [GO:0072012 "glomerulus vasculature
            development" evidence=IEA] [GO:0072049 "comma-shaped body
            morphogenesis" evidence=IEA] [GO:0072050 "S-shaped body
            morphogenesis" evidence=IEA] [GO:0072141 "renal interstitial cell
            development" evidence=IEA] [GO:0072282 "metanephric nephron tubule
            morphogenesis" evidence=IEA] [GO:0090102 "cochlea development"
            evidence=IEA] [GO:0097084 "vascular smooth muscle cell development"
            evidence=IEA] [GO:0097150 "neuronal stem cell maintenance"
            evidence=IEA] [GO:2000227 "negative regulation of pancreatic A cell
            differentiation" evidence=IEA] [GO:2000737 "negative regulation of
            stem cell differentiation" evidence=IEA] [GO:2000974 "negative
            regulation of pro-B cell differentiation" evidence=IEA]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF07527 PROSITE:PS51054
            SMART:SM00353 GO:GO:0005634 GO:GO:0005737 GO:GO:0016477
            GO:GO:0006461 GO:GO:0001078 GO:GO:0045944 GO:GO:0007155
            GO:GO:0045747 GO:GO:0030513 GO:GO:0042102 GO:GO:0046331
            Gene3D:4.10.280.10 GO:GO:0045598 GO:GO:0007224 GO:GO:0042517
            InterPro:IPR018352 SMART:SM00511 GO:GO:0043388 GO:GO:0003266
            GO:GO:0007262 GO:GO:0048505 GeneTree:ENSGT00700000104168
            GO:GO:0071820 GO:GO:2000227 GO:GO:0061106 EMBL:AADN02040837
            EMBL:AADN02040838 IPI:IPI00823163 Ensembl:ENSGALT00000040170
            OMA:HTPDKPK ArrayExpress:F1NWR8 Uniprot:F1NWR8
        Length = 264

 Score = 154 (59.3 bits), Expect = 5.4e-12, Sum P(3) = 5.4e-12
 Identities = 35/66 (53%), Positives = 48/66 (72%)

Query:   300 SAKTENTKHSKLEKADILELTVRHL---QRQKI---LSSD--IRSKYKAGYEECSREVSR 351
             S K ++++HSKLEKADILE+TV+HL   QR ++   LS+D  +  KY+AG+ EC  EV+R
Sbjct:    39 SKKNKSSRHSKLEKADILEMTVKHLRNLQRAQMAAALSADPSVLGKYRAGFNECMNEVTR 98

Query:   352 FLETPE 357
             FL T E
Sbjct:    99 FLSTCE 104

 Score = 54 (24.1 bits), Expect = 5.4e-12, Sum P(3) = 5.4e-12
 Identities = 12/27 (44%), Positives = 16/27 (59%)

Query:   521 QLIPSRLPDGQVVFILPNYMAPSTSPP 547
             QL+P+   DGQ  F++PN   P  S P
Sbjct:   179 QLVPAT--DGQFAFLIPNPAFPPGSGP 203

 Score = 51 (23.0 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
 Identities = 14/40 (35%), Positives = 18/40 (45%)

Query:   542 PSTSP-PCKDDLKSSPPPLSNLDQPLDFSIKRDDSMWRPW 580
             PS SP         S  P S    P+    +R +S+WRPW
Sbjct:   228 PSASPVQGLTSFGHSVVPASQAGSPI---AERRESVWRPW 264

 Score = 46 (21.3 bits), Expect = 5.4e-12, Sum P(3) = 5.4e-12
 Identities = 8/20 (40%), Positives = 13/20 (65%)

Query:   403 IDSGVRQRLFRHLENCMSEI 422
             +++ VR RL  HL  C+ +I
Sbjct:   106 VNADVRARLLGHLSACLGQI 125


>UNIPROTKB|E1B6Z2 [details] [associations]
            symbol:E1B6Z2 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0060164 "regulation of timing of neuron
            differentiation" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0030901 "midbrain development" evidence=IEA] [GO:0021575
            "hindbrain morphogenesis" evidence=IEA] [GO:0021558 "trochlear
            nerve development" evidence=IEA] [GO:0021557 "oculomotor nerve
            development" evidence=IEA] [GO:0021555 "midbrain-hindbrain boundary
            morphogenesis" evidence=IEA] [GO:0001701 "in utero embryonic
            development" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0046983 "protein dimerization activity" evidence=IEA]
            InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
            GO:GO:0001701 GO:GO:0045944 GO:GO:0000122 GO:GO:0030901
            Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0021575
            GeneTree:ENSGT00700000104130 GO:GO:0021555 GO:GO:0021557
            GO:GO:0060164 GO:GO:0021558 OMA:QGLWPVP EMBL:DAAA02043087
            IPI:IPI00730168 Ensembl:ENSBTAT00000034110 Uniprot:E1B6Z2
        Length = 203

 Score = 150 (57.9 bits), Expect = 7.1e-12, Sum P(2) = 7.1e-12
 Identities = 42/110 (38%), Positives = 63/110 (57%)

Query:   254 MSSPPLVASSNSIPPA-LKRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLE 312
             M + P    S+  P    ++ +KPLMEK+RRARIN SL  LK+L L+   +   +  KLE
Sbjct:     1 MGTQPETQGSSGGPTGNFRKVSKPLMEKKRRARINVSLEQLKSL-LEKHYSHQIRKRKLE 59

Query:   313 KADILELTVRHLQR-QKILSS--DIRS--KYKAGYEECSREVSRFLETPE 357
             KADILEL+V++++  Q  +     + S  +Y +G+  C   VS+ L   E
Sbjct:    60 KADILELSVKYMKSLQNSVQGLWPVPSGVEYPSGFRGCLPGVSQLLRRGE 109

 Score = 39 (18.8 bits), Expect = 7.1e-12, Sum P(2) = 7.1e-12
 Identities = 14/45 (31%), Positives = 20/45 (44%)

Query:   543 STSPPCKDDLKSSPPPLS-NLDQPLDFSIKRDDS------MWRPW 580
             S SPP +  L    P  S ++  P   S +  +S      +WRPW
Sbjct:   159 SRSPPPRRLLSGGLPGASTSIPAPQSTSRRFAESPEPGLRLWRPW 203


>FB|FBgn0002633 [details] [associations]
            symbol:E(spl)m7-HLH "Enhancer of split m7, helix-loop-helix"
            species:7227 "Drosophila melanogaster" [GO:0001078 "RNA polymerase
            II core promoter proximal region sequence-specific DNA binding
            transcription factor activity involved in negative regulation of
            transcription" evidence=IDA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IMP;IDA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IDA]
            [GO:0008134 "transcription factor binding" evidence=IGI;IPI]
            [GO:0006357 "regulation of transcription from RNA polymerase II
            promoter" evidence=NAS] [GO:0005634 "nucleus" evidence=NAS]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=NAS;TAS] [GO:0048749 "compound eye development"
            evidence=TAS] [GO:0046983 "protein dimerization activity"
            evidence=IEA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
            [GO:0048666 "neuron development" evidence=IMP] [GO:0048854 "brain
            morphogenesis" evidence=IMP] [GO:0001964 "startle response"
            evidence=IMP] [GO:0031987 "locomotion involved in locomotory
            behavior" evidence=IMP] [GO:2001020 "regulation of response to DNA
            damage stimulus" evidence=IGI] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 EMBL:AE014297 GO:GO:0005634
            GO:GO:0001078 GO:GO:0043565 GO:GO:0048813 Gene3D:4.10.280.10
            SUPFAM:SSF47459 GO:GO:0008134 GO:GO:0048749 GO:GO:0048854
            InterPro:IPR018352 SMART:SM00511 GO:GO:0031987 GO:GO:0001964
            GeneTree:ENSGT00700000104130 KO:K09090 EMBL:AY779906 EMBL:AY779907
            EMBL:AY779908 EMBL:AY779909 EMBL:AY779910 EMBL:AY779911
            EMBL:AY779912 EMBL:AY779913 EMBL:AY779914 EMBL:AY779915
            EMBL:AY779916 EMBL:AY779917 EMBL:AY779918 EMBL:AY779919
            EMBL:AY779920 EMBL:AY779921 EMBL:X16553 EMBL:BT022121 PIR:S03626
            RefSeq:NP_536753.1 UniGene:Dm.24100 ProteinModelPortal:P13097
            SMR:P13097 DIP:DIP-626N IntAct:P13097 MINT:MINT-188653
            STRING:P13097 PRIDE:P13097 EnsemblMetazoa:FBtr0084960 GeneID:43160
            KEGG:dme:Dmel_CG8361 CTD:43160 FlyBase:FBgn0002633 eggNOG:NOG241578
            InParanoid:P13097 OMA:FRAGYIR OrthoDB:EOG4BG7C7 PhylomeDB:P13097
            GenomeRNAi:43160 NextBio:832477 Bgee:P13097 GermOnline:CG8361
            Uniprot:P13097
        Length = 186

 Score = 151 (58.2 bits), Expect = 8.9e-12, Sum P(2) = 8.9e-12
 Identities = 36/87 (41%), Positives = 56/87 (64%)

Query:   271 KRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQR---- 326
             ++  KPL+E++RRARIN+ L  LK L+ +      T  +K EKADILE+TV+HL++    
Sbjct:    14 RKVMKPLLERKRRARINKCLDELKDLMAECVA--QTGDAKFEKADILEVTVQHLRKLKES 71

Query:   327 QKILSSDIRSKYKAGYEECSREVSRFL 353
             +K + ++    ++AGY   + EVSR L
Sbjct:    72 KKHVPANPEQSFRAGYIRAANEVSRAL 98

 Score = 37 (18.1 bits), Expect = 8.9e-12, Sum P(2) = 8.9e-12
 Identities = 10/30 (33%), Positives = 13/30 (43%)

Query:   554 SSPPPLSN---LDQPLDFSIKRDDSMWRPW 580
             SS  P+S+    D      I     +WRPW
Sbjct:   157 SSISPVSSGYASDNESLLQISSPGQVWRPW 186


>UNIPROTKB|E1BW65 [details] [associations]
            symbol:LOC419390 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
            "protein dimerization activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] InterPro:IPR003650 InterPro:IPR011598
            Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054
            SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GeneTree:ENSGT00700000104168 EMBL:AADN02040879 IPI:IPI00685083
            Ensembl:ENSGALT00000035200 ArrayExpress:E1BW65 Uniprot:E1BW65
        Length = 159

 Score = 144 (55.7 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
 Identities = 37/97 (38%), Positives = 53/97 (54%)

Query:   264 NSIPPALK-RANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVR 322
             N + P  K +  KP++EK RR RIN S+  LK L+L+     +  +SKLEKADILE+ V 
Sbjct:    12 NLLTPKEKNKLRKPVVEKMRRDRINSSIEQLK-LLLEKEFQRHQPNSKLEKADILEMAVS 70

Query:   323 ------HLQRQKILSSDIRSKYKAGYEECSREVSRFL 353
                   HLQ ++      +  ++ GY  C +E   FL
Sbjct:    71 YLKQQSHLQMKRSFHKSYQFDFREGYSRCLQEAFHFL 107

 Score = 43 (20.2 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
 Identities = 12/46 (26%), Positives = 22/46 (47%)

Query:   535 ILPNYMAPSTSPPCKDDLKSSPPPLSNLDQPLDFSIKRDDSMWRPW 580
             +L ++    ++ P   ++  SP   + L Q    S K   ++WRPW
Sbjct:   120 LLSHFQKSQSAAP---EVSFSPSKPTTLKQA---SPKDTGTLWRPW 159


>ZFIN|ZDB-GENE-030131-2376 [details] [associations]
            symbol:her8a "hairy-related 8a" species:7955
            "Danio rerio" [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0050768 "negative regulation of neurogenesis" evidence=IMP]
            [GO:0042063 "gliogenesis" evidence=IMP] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010
            Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353
            ZFIN:ZDB-GENE-030131-2376 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0042063
            GO:GO:0050768 GeneTree:ENSGT00700000104130 EMBL:CR848737
            IPI:IPI00487719 Ensembl:ENSDART00000123395 ArrayExpress:F1QI81
            Uniprot:F1QI81
        Length = 253

 Score = 155 (59.6 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
 Identities = 41/94 (43%), Positives = 57/94 (60%)

Query:   271 KRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRH---LQR- 326
             ++  KPL+EK+RR RIN SL  LK +++D+    N   SKLEKAD+LE+TV+H   LQR 
Sbjct:    52 RKLRKPLIEKKRRERINSSLEQLKGIMVDAY---NLDQSKLEKADVLEITVQHMENLQRG 108

Query:   327 --QKILSS-----DIRSKYKAGYEECSREVSRFL 353
               Q   +S     + R +Y +GY +C  EV   L
Sbjct:   109 HGQGGSNSPGTGFESRQRYSSGYIQCMHEVHNLL 142

 Score = 61 (26.5 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
 Identities = 23/71 (32%), Positives = 30/71 (42%)

Query:   520 LQLIPSRLPDGQVVFILPNYMAPSTSPPCKD--DL-----KSSPPPLSNLDQPLD---FS 569
             L L P++ P      + P+ +  S SPP      L     +SSPP   +   P     F 
Sbjct:   183 LPLSPTQSPINLPSSLQPHALLLSPSPPSSPTHSLVRPREQSSPPSSPSPQSPASLPPFF 242

Query:   570 IKRDDSMWRPW 580
                D SMWRPW
Sbjct:   243 PGVDPSMWRPW 253


>UNIPROTKB|E1BVE8 [details] [associations]
            symbol:LOC419390 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
            "protein dimerization activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] InterPro:IPR003650 InterPro:IPR011598
            Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054
            SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GeneTree:ENSGT00700000104168 EMBL:AADN02040879 IPI:IPI00597628
            RefSeq:XP_417552.2 UniGene:Gga.9574 PRIDE:E1BVE8
            Ensembl:ENSGALT00000001708 GeneID:419390 KEGG:gga:419390
            OMA:QEAFHFL NextBio:20822452 ArrayExpress:E1BVE8 Uniprot:E1BVE8
        Length = 161

 Score = 142 (55.0 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
 Identities = 39/99 (39%), Positives = 54/99 (54%)

Query:   264 NSIPPALK-RANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVR 322
             N + P  K +  KP++EK RR RIN S+  LK L+L+     +  +SKLEKADILE+ V 
Sbjct:    12 NLLTPKEKNKLRKPVVEKMRRDRINSSIEQLK-LLLEKEFQRHQPNSKLEKADILEMAVS 70

Query:   323 HLQRQKIL----SSDIRSKY----KAGYEECSREVSRFL 353
             +L++Q  L    S      Y    + GY  C +E   FL
Sbjct:    71 YLKQQSHLQMKTSGSFHKSYQFDFREGYSRCLQEAFHFL 109

 Score = 43 (20.2 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
 Identities = 12/46 (26%), Positives = 22/46 (47%)

Query:   535 ILPNYMAPSTSPPCKDDLKSSPPPLSNLDQPLDFSIKRDDSMWRPW 580
             +L ++    ++ P   ++  SP   + L Q    S K   ++WRPW
Sbjct:   122 LLSHFQKSQSAAP---EVSFSPSKPTTLKQA---SPKDTGTLWRPW 161


>ZFIN|ZDB-GENE-060815-4 [details] [associations]
            symbol:her8.2 "hairy-related 8.2" species:7955 "Danio
            rerio" [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0046983 "protein dimerization activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010
            Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353
            ZFIN:ZDB-GENE-060815-4 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG241578
            HOGENOM:HOG000236346 HOVERGEN:HBG107098 OrthoDB:EOG4G7C0H
            EMBL:BC117621 IPI:IPI00952513 UniGene:Dr.86703 InParanoid:Q1ECY5
            Uniprot:Q1ECY5
        Length = 223

 Score = 155 (59.6 bits), Expect = 7.9e-11, Sum P(2) = 7.9e-11
 Identities = 36/92 (39%), Positives = 54/92 (58%)

Query:   271 KRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQR---- 326
             ++  KPL+E++RR RIN  L  L+  ++   K +    SKLEKADILE+TV+HLQ     
Sbjct:    35 RKLRKPLIERKRRERINLCLDQLRETVVGVFKPDQ---SKLEKADILEMTVKHLQNIQSS 91

Query:   327 ---QKILSSDIRSKYKAGYEECSREVSRFLET 355
                  +L++  R +Y  GY +C +EV   L +
Sbjct:    92 RVSDPVLNTGARQRYSTGYIQCMQEVHNLLHS 123

 Score = 44 (20.5 bits), Expect = 7.9e-11, Sum P(2) = 7.9e-11
 Identities = 13/43 (30%), Positives = 17/43 (39%)

Query:   542 PSTSPP--CKDDLKSSPPPLSNLDQPLDFSIKRDD--SMWRPW 580
             P +S P  CK   +S     + +  P D          MWRPW
Sbjct:   181 PCSSSPFLCKRPNQSQNQHFTPIRMPHDVESSHLSVLQMWRPW 223


>UNIPROTKB|F1MWE6 [details] [associations]
            symbol:HES6 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0030154 "cell differentiation" evidence=IEA]
            [GO:0007399 "nervous system development" evidence=IEA] [GO:0006357
            "regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0005667 "transcription factor complex"
            evidence=IEA] [GO:0003712 "transcription cofactor activity"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
            dimerization activity" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010
            Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353
            GO:GO:0007399 GO:GO:0030154 GO:GO:0003677 GO:GO:0003700
            GO:GO:0006357 GO:GO:0006351 GO:GO:0005667 GO:GO:0003712
            Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00700000104130
            OMA:EGSSFQD EMBL:DAAA02009388 IPI:IPI00717724 UniGene:Bt.13922
            Ensembl:ENSBTAT00000013017 Uniprot:F1MWE6
        Length = 225

 Score = 154 (59.3 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
 Identities = 38/93 (40%), Positives = 59/93 (63%)

Query:   271 KRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQ----- 325
             ++A KPL+EK+RRARIN+SL  L+ L+L  A+ +    +KLE A++LELTVR +Q     
Sbjct:    26 RKARKPLVEKKRRARINESLQELR-LLLAGAEVQ----AKLENAEVLELTVRRVQGALRG 80

Query:   326 ---RQKILSSDIRSKYKAGYEECSREVSRFLET 355
                 ++ L ++   ++ AGY +C  EV  F+ T
Sbjct:    81 RAREREQLQAEASERFAAGYIQCMHEVHTFVST 113

 Score = 46 (21.3 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
 Identities = 13/38 (34%), Positives = 18/38 (47%)

Query:   543 STSPPCKDDLKSSPPPLSNLDQPLDFSIKRDDSMWRPW 580
             S +PP  +   S P  L +L      S +   S+WRPW
Sbjct:   194 SRAPPA-EGTDSVPAALGSLT-----SARLAQSVWRPW 225


>MGI|MGI:1859852 [details] [associations]
            symbol:Hes6 "hairy and enhancer of split 6 (Drosophila)"
            species:10090 "Mus musculus" [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IDA] [GO:0003712
            "transcription cofactor activity" evidence=IDA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0005667 "transcription factor complex"
            evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0006357 "regulation of
            transcription from RNA polymerase II promoter" evidence=IDA;IMP]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0007399 "nervous system development" evidence=IMP] [GO:0008134
            "transcription factor binding" evidence=NAS] [GO:0030154 "cell
            differentiation" evidence=IDA] [GO:0046983 "protein dimerization
            activity" evidence=IEA] InterPro:IPR003650 InterPro:IPR011598
            Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054
            SMART:SM00353 MGI:MGI:1859852 GO:GO:0007399 GO:GO:0030154
            GO:GO:0003677 GO:GO:0003700 GO:GO:0006357 GO:GO:0006351
            GO:GO:0005667 GO:GO:0003712 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GO:GO:0008134 GeneTree:ENSGT00700000104130 eggNOG:NOG241578
            HOGENOM:HOG000236346 KO:K09087 CTD:55502 HOVERGEN:HBG107098
            OMA:EGSSFQD OrthoDB:EOG4G7C0H ChiTaRS:HES6 EMBL:AB035178
            EMBL:AF247040 EMBL:AF260236 EMBL:AK013443 EMBL:AK076135
            EMBL:AK155340 EMBL:BC012897 IPI:IPI00119301 RefSeq:NP_062352.1
            UniGene:Mm.280029 ProteinModelPortal:Q9JHE6 SMR:Q9JHE6
            STRING:Q9JHE6 PhosphoSite:Q9JHE6 PRIDE:Q9JHE6
            Ensembl:ENSMUST00000086851 GeneID:55927 KEGG:mmu:55927
            UCSC:uc007cau.1 InParanoid:Q9JHE6 NextBio:311596 Bgee:Q9JHE6
            CleanEx:MM_HES6 Genevestigator:Q9JHE6 GermOnline:ENSMUSG00000067071
            Uniprot:Q9JHE6
        Length = 224

 Score = 154 (59.3 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
 Identities = 39/93 (41%), Positives = 58/93 (62%)

Query:   271 KRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQ----- 325
             ++A KPL+EK+RRARIN+SL  L+ L+   A TE    +KLE A++LELTVR +Q     
Sbjct:    26 RKARKPLVEKKRRARINESLQELRLLL---AGTE--VQAKLENAEVLELTVRRVQGALRG 80

Query:   326 ---RQKILSSDIRSKYKAGYEECSREVSRFLET 355
                 ++ L ++   ++ AGY +C  EV  F+ T
Sbjct:    81 RAREREQLQAEASERFAAGYIQCMHEVHTFVST 113

 Score = 44 (20.5 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
 Identities = 6/10 (60%), Positives = 8/10 (80%)

Query:   571 KRDDSMWRPW 580
             +R  S+WRPW
Sbjct:   215 RRAQSVWRPW 224


>ZFIN|ZDB-GENE-990415-90 [details] [associations]
            symbol:her5 "hairy-related 5" species:7955 "Danio
            rerio" [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0046983 "protein dimerization activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0050768
            "negative regulation of neurogenesis" evidence=IMP] [GO:0007492
            "endoderm development" evidence=IMP] [GO:0048562 "embryonic organ
            morphogenesis" evidence=IMP] [GO:0030917 "midbrain-hindbrain
            boundary development" evidence=IMP] [GO:0005634 "nucleus"
            evidence=IEA;IC] [GO:0045737 "positive regulation of
            cyclin-dependent protein kinase activity" evidence=IMP] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=NAS] [GO:0042803 "protein homodimerization activity"
            evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0046982 "protein heterodimerization activity" evidence=IPI]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 ZFIN:ZDB-GENE-990415-90 GO:GO:0005634
            GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
            SUPFAM:SSF47459 GO:GO:0007492 GO:GO:0050768 GO:GO:0045737
            GO:GO:0030917 GeneTree:ENSGT00700000104130 GO:GO:0048562
            EMBL:FP015860 IPI:IPI00995421 Ensembl:ENSDART00000145336
            ArrayExpress:F1QJS9 Bgee:F1QJS9 Uniprot:F1QJS9
        Length = 227

 Score = 157 (60.3 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
 Identities = 38/96 (39%), Positives = 55/96 (57%)

Query:   270 LKRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQRQKI 329
             ++R  KPLMEKRRR RINQSL  L+ L+L++   E  K+ K+EKA+ILE  V  L+ ++ 
Sbjct:    28 MRRVPKPLMEKRRRDRINQSLETLRMLLLENTNNEKLKNPKVEKAEILESVVHFLRAEQA 87

Query:   330 LSSD---IRSKYKAGYEECSREVSRFLETPELHLGL 362
               +D   I    +A  EE   +V    +    H G+
Sbjct:    88 SETDPFQITRVKRARTEESDEDVESPCKRQSYHDGM 123

 Score = 40 (19.1 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query:   574 DSMWRPW 580
             D +WRPW
Sbjct:   221 DPVWRPW 227


>ZFIN|ZDB-GENE-050228-1 [details] [associations]
            symbol:her13 "hairy-related 13" species:7955 "Danio
            rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] InterPro:IPR003650 InterPro:IPR011598
            Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054
            SMART:SM00353 ZFIN:ZDB-GENE-050228-1 GO:GO:0005634 GO:GO:0006355
            GO:GO:0003677 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
            eggNOG:NOG241578 HOGENOM:HOG000236346 HOVERGEN:HBG107098
            OrthoDB:EOG4G7C0H EMBL:BC092944 IPI:IPI00611159
            RefSeq:NP_001017901.1 UniGene:Dr.151885 GeneID:550600
            KEGG:dre:550600 CTD:550600 InParanoid:Q568A5 NextBio:20879837
            Uniprot:Q568A5
        Length = 224

 Score = 142 (55.0 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
 Identities = 33/93 (35%), Positives = 54/93 (58%)

Query:   271 KRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHL------ 324
             ++  KP++EK+RRARIN+SL  L+ L+     T N   +K+E A++LELTV+ +      
Sbjct:    25 RKTRKPIVEKKRRARINESLQDLRTLL-----TNNDLQTKMENAEVLELTVKRVESILQS 79

Query:   325 --QRQKILSSDIRSKYKAGYEECSREVSRFLET 355
               Q    ++ +   ++ AGY +C  EV  F+ T
Sbjct:    80 RSQETGTVTQEASERFAAGYIQCMHEVHTFVST 112

 Score = 62 (26.9 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
 Identities = 15/48 (31%), Positives = 23/48 (47%)

Query:   536 LPNYMA-PSTSPPCKD-DLKSSPPPLSNLDQPLDFS-IKRDDSMWRPW 580
             LP +++ P     C D D   +    ++ +  LDFS +     MWRPW
Sbjct:   177 LPQFLSNPFCDDLCSDLDETETEERSASAEDTLDFSMVTHSKFMWRPW 224


>UNIPROTKB|Q96HZ4 [details] [associations]
            symbol:HES6 "Transcription cofactor HES-6" species:9606
            "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
            "protein dimerization activity" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0006357 "regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0007399 "nervous system
            development" evidence=IEA] [GO:0030154 "cell differentiation"
            evidence=IEA] [GO:0005667 "transcription factor complex"
            evidence=ISS] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=NAS] [GO:0003712 "transcription cofactor
            activity" evidence=ISS] [GO:0008134 "transcription factor binding"
            evidence=NAS] InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010
            Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353
            GO:GO:0007399 GO:GO:0030154 GO:GO:0003677 EMBL:CH471063
            GO:GO:0003700 GO:GO:0006357 GO:GO:0006351 GO:GO:0005667
            GO:GO:0003712 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0008134
            eggNOG:NOG241578 EMBL:AC016757 HOGENOM:HOG000236346 KO:K09087
            EMBL:AB035179 EMBL:AF260237 EMBL:AK075040 EMBL:AK293111
            EMBL:BC007939 IPI:IPI00452727 IPI:IPI00452728 IPI:IPI00915924
            RefSeq:NP_001136325.1 RefSeq:NP_061115.2 UniGene:Hs.42949
            ProteinModelPortal:Q96HZ4 SMR:Q96HZ4 STRING:Q96HZ4
            PhosphoSite:Q96HZ4 DMDM:50400609 PRIDE:Q96HZ4
            Ensembl:ENST00000272937 Ensembl:ENST00000409002
            Ensembl:ENST00000409160 GeneID:55502 KEGG:hsa:55502 UCSC:uc002vxz.3
            UCSC:uc002vya.3 UCSC:uc002vyb.2 CTD:55502 GeneCards:GC02M239166
            HGNC:HGNC:18254 HPA:CAB034351 MIM:610331 neXtProt:NX_Q96HZ4
            PharmGKB:PA29253 HOVERGEN:HBG107098 InParanoid:Q96HZ4 OMA:EGSSFQD
            OrthoDB:EOG4G7C0H PhylomeDB:Q96HZ4 ChiTaRS:HES6 GenomeRNAi:55502
            NextBio:59883 ArrayExpress:Q96HZ4 Bgee:Q96HZ4 CleanEx:HS_HES6
            Genevestigator:Q96HZ4 GermOnline:ENSG00000144485 Uniprot:Q96HZ4
        Length = 224

 Score = 154 (59.3 bits), Expect = 5.1e-10, Sum P(2) = 5.1e-10
 Identities = 38/93 (40%), Positives = 59/93 (63%)

Query:   271 KRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQ----- 325
             ++A KPL+EK+RRARIN+SL  L+ L+L  A+ +    +KLE A++LELTVR +Q     
Sbjct:    26 RKARKPLVEKKRRARINESLQELR-LLLAGAEVQ----AKLENAEVLELTVRRVQGVLRG 80

Query:   326 ---RQKILSSDIRSKYKAGYEECSREVSRFLET 355
                 ++ L ++   ++ AGY +C  EV  F+ T
Sbjct:    81 RAREREQLQAEASERFAAGYIQCMHEVHTFVST 113

 Score = 39 (18.8 bits), Expect = 5.1e-10, Sum P(2) = 5.1e-10
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query:   575 SMWRPW 580
             S+WRPW
Sbjct:   219 SVWRPW 224


>UNIPROTKB|F1SIU5 [details] [associations]
            symbol:HES6 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0030154 "cell differentiation" evidence=IEA]
            [GO:0007399 "nervous system development" evidence=IEA] [GO:0006357
            "regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0005667 "transcription factor complex"
            evidence=IEA] [GO:0003712 "transcription cofactor activity"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
            dimerization activity" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010
            Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353
            GO:GO:0007399 GO:GO:0030154 GO:GO:0003677 GO:GO:0003700
            GO:GO:0006357 GO:GO:0006351 GO:GO:0005667 GO:GO:0003712
            Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00700000104130
            KO:K09087 OMA:EGSSFQD EMBL:CU929385 RefSeq:XP_003359740.1
            Ensembl:ENSSSCT00000017797 GeneID:100622397 KEGG:ssc:100622397
            Uniprot:F1SIU5
        Length = 224

 Score = 154 (59.3 bits), Expect = 5.1e-10, Sum P(2) = 5.1e-10
 Identities = 38/93 (40%), Positives = 59/93 (63%)

Query:   271 KRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQ----- 325
             ++A KPL+EK+RRARIN+SL  L+ L+L  A+ +    +KLE A++LELTVR +Q     
Sbjct:    26 RKARKPLVEKKRRARINESLQELR-LLLAGAEVQ----AKLENAEVLELTVRRVQGALRG 80

Query:   326 ---RQKILSSDIRSKYKAGYEECSREVSRFLET 355
                 ++ L ++   ++ AGY +C  EV  F+ T
Sbjct:    81 RAREREQLQAEASERFAAGYIQCMHEVHTFVST 113

 Score = 39 (18.8 bits), Expect = 5.1e-10, Sum P(2) = 5.1e-10
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query:   575 SMWRPW 580
             S+WRPW
Sbjct:   219 SVWRPW 224


>UNIPROTKB|D6REB3 [details] [associations]
            symbol:HES4 "Transcription factor HES-4" species:9606 "Homo
            sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR003650 Pfam:PF07527 PROSITE:PS51054 GO:GO:0006355
            GO:GO:0003677 EMBL:AL645608 InterPro:IPR018352 SMART:SM00511
            HOGENOM:HOG000236346 HGNC:HGNC:24149 IPI:IPI00966381
            ProteinModelPortal:D6REB3 SMR:D6REB3 Ensembl:ENST00000484667
            ArrayExpress:D6REB3 Bgee:D6REB3 Uniprot:D6REB3
        Length = 189

 Score = 137 (53.3 bits), Expect = 9.6e-10, Sum P(2) = 9.6e-10
 Identities = 31/58 (53%), Positives = 44/58 (75%)

Query:   304 ENTKHSKLEKADILELTVRHLQ---RQKI---LSSD--IRSKYKAGYEECSREVSRFL 353
             ++++HSKLEKADILE+TVRHL+   R ++   LS+D  +  KY+AG+ EC  EV+RFL
Sbjct:    36 KSSRHSKLEKADILEMTVRHLRSLRRVQVTAALSADPAVLGKYRAGFHECLAEVNRFL 93

 Score = 41 (19.5 bits), Expect = 9.6e-10, Sum P(2) = 9.6e-10
 Identities = 7/20 (35%), Positives = 12/20 (60%)

Query:   403 IDSGVRQRLFRHLENCMSEI 422
             + + VR RL  HL  C+ ++
Sbjct:    99 VPADVRSRLLGHLAACLRQL 118


>ZFIN|ZDB-GENE-980526-125 [details] [associations]
            symbol:her1 "hairy-related 1" species:7955 "Danio
            rerio" [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0046983 "protein dimerization activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0001756
            "somitogenesis" evidence=IGI;IEP;IMP] [GO:0001757 "somite
            specification" evidence=IGI;IMP] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=IDA;IPI] [GO:0005667 "transcription factor complex"
            evidence=IC] [GO:0046982 "protein heterodimerization activity"
            evidence=IPI] InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010
            Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353
            ZFIN:ZDB-GENE-980526-125 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF292032
            IPI:IPI00499744 UniGene:Dr.1462 ProteinModelPortal:Q9DF72
            STRING:Q9DF72 HOVERGEN:HBG098402 InParanoid:Q9DF72
            ArrayExpress:Q9DF72 Uniprot:Q9DF72
        Length = 328

 Score = 133 (51.9 bits), Expect = 1.1e-09, Sum P(4) = 1.1e-09
 Identities = 28/63 (44%), Positives = 42/63 (66%)

Query:   271 KRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQRQKIL 330
             KR  KP++EK+RR RINQ L  L+ L+LD+      ++ KLEKA+ILEL V +++ +   
Sbjct:    13 KRILKPVIEKKRRDRINQRLEELRTLLLDNTLDSRLQNPKLEKAEILELAVEYIRTKTAT 72

Query:   331 SSD 333
             + D
Sbjct:    73 ARD 75

 Score = 56 (24.8 bits), Expect = 1.1e-09, Sum P(4) = 1.1e-09
 Identities = 14/34 (41%), Positives = 17/34 (50%)

Query:   528 PDGQVVFILPNYMAPSTSPPCKDDLKSSPPPLSN 561
             P GQ  ++ P Y   S SPP      SS PP S+
Sbjct:   214 PTGQHPYLSPPY---SISPPPSPGFSSSSPPFSS 244

 Score = 50 (22.7 bits), Expect = 1.1e-09, Sum P(4) = 1.1e-09
 Identities = 8/20 (40%), Positives = 14/20 (70%)

Query:   338 YKAGYEECSREVSRFLETPE 357
             YKAG++EC   ++ F++  E
Sbjct:   118 YKAGFKECISRLASFIDCVE 137

 Score = 37 (18.1 bits), Expect = 1.1e-09, Sum P(4) = 1.1e-09
 Identities = 6/21 (28%), Positives = 12/21 (57%)

Query:   560 SNLDQPLDFSIKRDDSMWRPW 580
             S+  + L  ++  +  +WRPW
Sbjct:   308 SSQPRTLRRALFHNQPLWRPW 328


>RGD|1312047 [details] [associations]
            symbol:Hes6 "hairy and enhancer of split 6 (Drosophila)"
            species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA;ISO] [GO:0003712
            "transcription cofactor activity" evidence=IEA;ISO] [GO:0005667
            "transcription factor complex" evidence=IEA;ISO] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006357
            "regulation of transcription from RNA polymerase II promoter"
            evidence=IEA;ISO] [GO:0007399 "nervous system development"
            evidence=IEA;ISO] [GO:0030154 "cell differentiation"
            evidence=IEA;ISO] [GO:0046983 "protein dimerization activity"
            evidence=IEA] InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010
            Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353
            RGD:1312047 GO:GO:0007399 GO:GO:0030154 GO:GO:0003677 GO:GO:0003700
            GO:GO:0006357 GO:GO:0006351 GO:GO:0005667 GO:GO:0003712
            Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00700000104130
            eggNOG:NOG241578 HOGENOM:HOG000236346 KO:K09087 CTD:55502
            HOVERGEN:HBG107098 OrthoDB:EOG4G7C0H EMBL:BC087597 IPI:IPI00201934
            RefSeq:NP_001013197.1 UniGene:Rn.11980 STRING:Q5PPN0
            Ensembl:ENSRNOT00000066346 GeneID:316626 KEGG:rno:316626
            UCSC:RGD:1312047 NextBio:671094 Genevestigator:Q5PPN0
            Uniprot:Q5PPN0
        Length = 234

 Score = 151 (58.2 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
 Identities = 39/92 (42%), Positives = 57/92 (61%)

Query:   272 RANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQ------ 325
             +A KPL+EK+RRARIN+SL  L+ L+   A TE    +KLE A++LELTVR +Q      
Sbjct:    37 QARKPLVEKKRRARINESLQELRLLL---AGTE--VQAKLENAEVLELTVRRVQGALRGR 91

Query:   326 --RQKILSSDIRSKYKAGYEECSREVSRFLET 355
                ++ L ++   ++ AGY +C  EV  F+ T
Sbjct:    92 AREREQLQAEASERFAAGYIQCMHEVHTFVST 123

 Score = 44 (20.5 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
 Identities = 6/10 (60%), Positives = 8/10 (80%)

Query:   571 KRDDSMWRPW 580
             +R  S+WRPW
Sbjct:   225 RRAQSVWRPW 234


>FB|FBgn0030899 [details] [associations]
            symbol:Her "HES-related" species:7227 "Drosophila
            melanogaster" [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISS] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0046983 "protein dimerization activity" evidence=IEA]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0005634
            GO:GO:0006355 GO:GO:0003677 EMBL:AE014298 GO:GO:0006351
            Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00700000104130
            EMBL:BT022141 RefSeq:NP_525094.1 UniGene:Dm.27580 SMR:Q9VWX7
            IntAct:Q9VWX7 MINT:MINT-303044 EnsemblMetazoa:FBtr0074590
            GeneID:32800 KEGG:dme:Dmel_CG5927 UCSC:CG5927-RA CTD:32800
            FlyBase:FBgn0030899 eggNOG:NOG285685 InParanoid:Q9VWX7
            OrthoDB:EOG4JH9XZ GenomeRNAi:32800 NextBio:780468 Uniprot:Q9VWX7
        Length = 149

 Score = 126 (49.4 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
 Identities = 31/92 (33%), Positives = 52/92 (56%)

Query:   275 KPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQRQKI----- 329
             KP+ME++RR+RIN+ L  +K L+ + +  +    +K++  D+LEL V HL ++       
Sbjct:    26 KPMMERKRRSRINRCLDFIKDLLQEVSHLDGETMAKMDMGDVLELAVHHLSKKNCPVATP 85

Query:   330 ----LSSDIRSK---YKAGYEECSREVSRFLE 354
                  S   +S    Y +G+ EC  EVS+FL+
Sbjct:    86 TTAPTSGVYQSPIDCYWSGFRECVLEVSQFLQ 117

 Score = 42 (19.8 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
 Identities = 7/19 (36%), Positives = 11/19 (57%)

Query:   562 LDQPLDFSIKRDDSMWRPW 580
             LD  +  + K   ++WRPW
Sbjct:   131 LDHLVASTSKSKPNLWRPW 149


>FB|FBgn0002733 [details] [associations]
            symbol:E(spl)mbeta-HLH "Enhancer of split mbeta,
            helix-loop-helix" species:7227 "Drosophila melanogaster"
            [GO:0003677 "DNA binding" evidence=ISS;NAS] [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEP;ISS] [GO:0005634 "nucleus" evidence=IC;NAS]
            [GO:0043565 "sequence-specific DNA binding" evidence=IDA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=TAS] [GO:0048749 "compound eye development"
            evidence=TAS] [GO:0007399 "nervous system development"
            evidence=NAS] [GO:0007219 "Notch signaling pathway" evidence=NAS]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=NAS] [GO:0046983 "protein dimerization activity"
            evidence=IEA] InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010
            Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353
            EMBL:AE014297 GO:GO:0005634 GO:GO:0007399 GO:GO:0030154
            GO:GO:0043565 GO:GO:0007219 GO:GO:0003700 GO:GO:0006351
            GO:GO:0000122 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048749
            InterPro:IPR018352 SMART:SM00511 GeneTree:ENSGT00700000104130
            KO:K09090 EMBL:AY779906 EMBL:AY779907 EMBL:AY779908 EMBL:AY779909
            EMBL:AY779910 EMBL:AY779911 EMBL:AY779912 EMBL:AY779913
            EMBL:AY779914 EMBL:AY779915 EMBL:AY779916 EMBL:AY779917
            EMBL:AY779918 EMBL:AY779919 EMBL:AY779920 EMBL:AY779921 EMBL:M96166
            EMBL:X67047 EMBL:AY118723 PIR:C46177 RefSeq:NP_524505.2
            UniGene:Dm.4538 ProteinModelPortal:Q01069 SMR:Q01069 DIP:DIP-721N
            IntAct:Q01069 MINT:MINT-899518 STRING:Q01069 PRIDE:Q01069
            EnsemblMetazoa:FBtr0084982 GeneID:43152 KEGG:dme:Dmel_CG14548
            CTD:43152 FlyBase:FBgn0002733 eggNOG:NOG303202 InParanoid:Q01069
            OMA:STSGPMW OrthoDB:EOG4J3V0B PhylomeDB:Q01069 ChiTaRS:HLHmbeta
            GenomeRNAi:43152 NextBio:832437 Bgee:Q01069 GermOnline:CG14548
            Uniprot:Q01069
        Length = 195

 Score = 130 (50.8 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
 Identities = 25/56 (44%), Positives = 41/56 (73%)

Query:   271 KRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQR 326
             ++  KP++E++RRARIN+ L  LK ++++    E    ++LEKADILELTV H+++
Sbjct:    14 RKVMKPMLERKRRARINKCLDELKDIMVECLTQEGEHITRLEKADILELTVEHMKK 69

 Score = 47 (21.6 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
 Identities = 19/62 (30%), Positives = 26/62 (41%)

Query:   520 LQLIPSRLPDGQVVFILPNYMAPSTSPPCK-DDLKSSPPPLSNLDQPLDFSIKRDDSMWR 578
             LQ++   LP G  +       A  T PP + D L+S     +    P + S      MWR
Sbjct:   139 LQVVVPSLPIGVPLQAPVEDQAMVTPPPSECDSLESG----ACSPAPSEAS-STSGPMWR 193

Query:   579 PW 580
             PW
Sbjct:   194 PW 195

 Score = 41 (19.5 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
 Identities = 8/20 (40%), Positives = 12/20 (60%)

Query:   334 IRSKYKAGYEECSREVSRFL 353
             I   ++AGY   + EVS+ L
Sbjct:    95 IAESFRAGYVHAANEVSKTL 114


>UNIPROTKB|E1C2Y3 [details] [associations]
            symbol:HES6 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
            "protein dimerization activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] InterPro:IPR003650 InterPro:IPR011598
            Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054
            SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GeneTree:ENSGT00700000104130 EMBL:AADN02024211 IPI:IPI00819473
            Ensembl:ENSGALT00000040988 OMA:SINIRRR ArrayExpress:E1C2Y3
            Uniprot:E1C2Y3
        Length = 182

 Score = 145 (56.1 bits), Expect = 2.3e-09, P = 2.3e-09
 Identities = 37/97 (38%), Positives = 55/97 (56%)

Query:   271 KRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQR---Q 327
             ++  KPL+E++RR RIN  L  LK  ++ +   +    SKLEKADILE+TV+HLQ     
Sbjct:    20 RKLRKPLIERKRRERINNCLDQLKETVVGAFHLD----SKLEKADILEMTVKHLQNIQNS 75

Query:   328 KILSS-------DIRSKYKAGYEECSREVSRFLETPE 357
             K++ +       + + +Y  GY +C  EV   L T E
Sbjct:    76 KLMDTADSKVGLEAQQRYSTGYIQCMHEVHNLLLTCE 112


>UNIPROTKB|E1C412 [details] [associations]
            symbol:HES6 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
            "protein dimerization activity" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0003712 "transcription cofactor activity"
            evidence=IEA] [GO:0005667 "transcription factor complex"
            evidence=IEA] [GO:0006357 "regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0007399 "nervous system
            development" evidence=IEA] [GO:0030154 "cell differentiation"
            evidence=IEA] InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010
            Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353
            GO:GO:0030154 GO:GO:0003677 GO:GO:0003700 GO:GO:0006357
            GO:GO:0006351 GO:GO:0005667 GO:GO:0003712 Gene3D:4.10.280.10
            SUPFAM:SSF47459 GeneTree:ENSGT00700000104130 KO:K09087 CTD:55502
            EMBL:AADN02024211 IPI:IPI00595723 RefSeq:XP_422641.3
            UniGene:Gga.2703 Ensembl:ENSGALT00000008864 GeneID:424829
            KEGG:gga:424829 ArrayExpress:E1C412 Uniprot:E1C412
        Length = 227

 Score = 151 (58.2 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
 Identities = 37/95 (38%), Positives = 55/95 (57%)

Query:   271 KRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQR---Q 327
             ++  KPL+E++RR RIN  L  LK  ++ +   +    SKLEKADILE+TV+HLQ     
Sbjct:    20 RKLRKPLIERKRRERINNCLDQLKETVVGAFHLDQ---SKLEKADILEMTVKHLQNIQNS 76

Query:   328 KILSS-----DIRSKYKAGYEECSREVSRFLETPE 357
             K+++      + + +Y  GY +C  EV   L T E
Sbjct:    77 KLMADSKVGLEAQQRYSTGYIQCMHEVHNLLLTCE 111

 Score = 39 (18.8 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query:   576 MWRPW 580
             MWRPW
Sbjct:   223 MWRPW 227


>UNIPROTKB|F1RIM0 [details] [associations]
            symbol:HES3 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0060164 "regulation of timing of neuron
            differentiation" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0030901 "midbrain development" evidence=IEA] [GO:0021575
            "hindbrain morphogenesis" evidence=IEA] [GO:0021558 "trochlear
            nerve development" evidence=IEA] [GO:0021557 "oculomotor nerve
            development" evidence=IEA] [GO:0021555 "midbrain-hindbrain boundary
            morphogenesis" evidence=IEA] [GO:0001701 "in utero embryonic
            development" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0046983 "protein dimerization activity" evidence=IEA]
            InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
            GO:GO:0001701 GO:GO:0045944 GO:GO:0000122 GO:GO:0030901
            Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0021575
            GeneTree:ENSGT00700000104130 GO:GO:0021555 GO:GO:0021557
            GO:GO:0060164 GO:GO:0021558 EMBL:FP102454
            Ensembl:ENSSSCT00000003740 OMA:PLVHERA Uniprot:F1RIM0
        Length = 215

 Score = 141 (54.7 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
 Identities = 36/78 (46%), Positives = 51/78 (65%)

Query:   255 SSPPLVASSNSIPPA-------LKRANKPLMEKRRRARINQSLALLKALILDSAKTENTK 307
             ++PP   S N+ PP         ++ +KPLMEK+RRARIN SL  LKAL L+   +   +
Sbjct:    14 AAPP--TSENTSPPVPSTCQQHRRKISKPLMEKKRRARINVSLEQLKAL-LEKHYSHQIR 70

Query:   308 HSKLEKADILELTVRHLQ 325
               KLEKADILEL+V++++
Sbjct:    71 KRKLEKADILELSVKYVK 88

 Score = 46 (21.3 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
 Identities = 8/22 (36%), Positives = 11/22 (50%)

Query:   537 PNYMAPSTSPPCKDDLKSSPPP 558
             P   AP+   PC    ++ PPP
Sbjct:   156 PGPEAPAPRGPCAPSFEAPPPP 177


>UNIPROTKB|J9P9B3 [details] [associations]
            symbol:HEY2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 GO:GO:0005634 GO:GO:0006355
            GO:GO:0003677 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
            InterPro:IPR018352 SMART:SM00511 GeneTree:ENSGT00700000104130
            EMBL:AAEX03000421 Ensembl:ENSCAFT00000044703 OMA:FRECTAE
            Uniprot:J9P9B3
        Length = 149

 Score = 123 (48.4 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
 Identities = 39/114 (34%), Positives = 62/114 (54%)

Query:   252 VVMSSPPLVASSNSIPPALKRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKL 311
             V+ S+ P   S   I    KR  + ++EKRRR RIN SL+ L+ L+  + + + +  +KL
Sbjct:     9 VIRSNSPTTTSQ--IMARKKR--RGIIEKRRRDRINNSLSELRRLVPTAFEKQGS--AKL 62

Query:   312 EKADILELTVRHLQRQKILSS----DIRSK----YKAGYEECSREVSRFLETPE 357
             EKA+IL++TV HL+  +        D  +        G+ EC  EV+R+L + E
Sbjct:    63 EKAEILQMTVDHLKMLQATGGKGYFDAHALALDFMSIGFRECLGEVARYLSSVE 116

 Score = 39 (18.8 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
 Identities = 9/21 (42%), Positives = 12/21 (57%)

Query:   403 IDSG--VRQRLFRHLENCMSE 421
             +DS   +R RL  HL  C S+
Sbjct:   118 LDSSDPLRARLVSHLSTCASQ 138


>UNIPROTKB|E1BVD7 [details] [associations]
            symbol:E1BVD7 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
            "protein dimerization activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] InterPro:IPR003650 InterPro:IPR011598
            Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054
            SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GeneTree:ENSGT00700000104168 EMBL:AADN02040879 IPI:IPI00577484
            Ensembl:ENSGALT00000001714 OMA:NSGYLRC Uniprot:E1BVD7
        Length = 146

 Score = 141 (54.7 bits), Expect = 6.1e-09, P = 6.1e-09
 Identities = 35/93 (37%), Positives = 50/93 (53%)

Query:   267 PPALKRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQR 326
             P    +  KP++EK RR RIN S+  LK L+L+     +  +SKLEKAD+LE+ V +L++
Sbjct:     7 PKEKNKLRKPVVEKMRRDRINSSIEQLK-LLLEKEFQRHQPNSKLEKADVLEVAVSYLKQ 65

Query:   327 QKILSSDI------RSKYKAGYEECSREVSRFL 353
             Q  L             + +GY  C RE   FL
Sbjct:    66 QSQLQEPAFIHKNPEQDFNSGYLRCLREAMHFL 98


>UNIPROTKB|F1P0F5 [details] [associations]
            symbol:F1P0F5 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0046983 "protein dimerization activity"
            evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
            SMART:SM00353 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GeneTree:ENSGT00700000104168 EMBL:AADN02040879 IPI:IPI00819827
            Ensembl:ENSGALT00000040448 Uniprot:F1P0F5
        Length = 115

 Score = 141 (54.7 bits), Expect = 6.1e-09, P = 6.1e-09
 Identities = 35/93 (37%), Positives = 50/93 (53%)

Query:   267 PPALKRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQR 326
             P    +  KP++EK RR RIN S+  LK L+L+     +  +SKLEKAD+LE+ V +L++
Sbjct:    14 PKEKNKLRKPVVEKMRRDRINSSIEQLK-LLLEKEFQRHQPNSKLEKADVLEVAVSYLKQ 72

Query:   327 QKILSSDI------RSKYKAGYEECSREVSRFL 353
             Q  L             + +GY  C RE   FL
Sbjct:    73 QSQLQEPAFIHKNPEQDFNSGYLRCLREAMHFL 105


>UNIPROTKB|A1L3K9 [details] [associations]
            symbol:LOC100037036 "LOC100037036 protein" species:8355
            "Xenopus laevis" [GO:0005515 "protein binding" evidence=IPI]
            [GO:0043425 "bHLH transcription factor binding" evidence=IPI]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0005634
            GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 Gene3D:4.10.280.10
            SUPFAM:SSF47459 HOVERGEN:HBG107098 EMBL:BC130161 UniGene:Xl.74933
            Uniprot:A1L3K9
        Length = 222

 Score = 138 (53.6 bits), Expect = 9.5e-09, Sum P(3) = 9.5e-09
 Identities = 33/93 (35%), Positives = 55/93 (59%)

Query:   271 KRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQR---Q 327
             ++  KPL+EKRRRARIN+SL  L+ ++ D     N   +K+E A++L+LTV+ ++R    
Sbjct:    41 RQTRKPLVEKRRRARINESLQELRGILSD-----NEFQTKIENAEVLDLTVKRVERILRN 95

Query:   328 KILSSD-----IRSKYKAGYEECSREVSRFLET 355
             +   +D        ++ AGY +C  EV  F+ +
Sbjct:    96 RTAEADRLQREASERFAAGYIQCMHEVHTFVSS 128

 Score = 40 (19.1 bits), Expect = 9.5e-09, Sum P(3) = 9.5e-09
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query:   575 SMWRPW 580
             +MWRPW
Sbjct:   217 TMWRPW 222

 Score = 39 (18.8 bits), Expect = 9.5e-09, Sum P(3) = 9.5e-09
 Identities = 11/35 (31%), Positives = 19/35 (54%)

Query:   415 LENCMSEIDLDFSASAEKLGITQDFSSEDDSAFPM 449
             L++ + ++ LD  +S E  G+    SS +DS   M
Sbjct:   155 LQDLVMDVLLDSPSSEEGCGLGVLGSSSEDSCSDM 189


>UNIPROTKB|J3KSH6 [details] [associations]
            symbol:HES7 "Transcription factor HES-7" species:9606 "Homo
            sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
            "protein dimerization activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] InterPro:IPR003650 InterPro:IPR011598
            Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054
            SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC129492
            HGNC:HGNC:15977 Ensembl:ENST00000577735 Uniprot:J3KSH6
        Length = 145

 Score = 135 (52.6 bits), Expect = 2.7e-08, P = 2.7e-08
 Identities = 28/56 (50%), Positives = 42/56 (75%)

Query:   275 KPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHL-QRQKI 329
             KPL+EKRRR RIN+SL  L+ L+L+  + +N ++ KLEKA+ILE  V +L +R ++
Sbjct:     9 KPLVEKRRRDRINRSLEELRLLLLERTRDQNLRNPKLEKAEILEFAVGYLRERSRV 64


>ZFIN|ZDB-GENE-040824-5 [details] [associations]
            symbol:her12 "hairy-related 12" species:7955 "Danio
            rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0001756 "somitogenesis" evidence=IMP] [GO:0007219 "Notch
            signaling pathway" evidence=IGI] [GO:0007420 "brain development"
            evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 ZFIN:ZDB-GENE-040824-5 GO:GO:0005634
            GO:GO:0007420 GO:GO:0006355 GO:GO:0003677 GO:GO:0007219
            GO:GO:0006351 GO:GO:0001756 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GeneTree:ENSGT00700000104168 HOVERGEN:HBG005960 KO:K06055
            EMBL:CU062502 EMBL:AY426713 IPI:IPI00481696 RefSeq:NP_991182.1
            UniGene:Dr.29089 Ensembl:ENSDART00000044080
            Ensembl:ENSDART00000112929 GeneID:402914 KEGG:dre:402914 CTD:402914
            InParanoid:Q6TA36 OMA:SHCWRES NextBio:20816727 Uniprot:Q6TA36
        Length = 155

 Score = 134 (52.2 bits), Expect = 3.5e-08, P = 3.5e-08
 Identities = 34/83 (40%), Positives = 47/83 (56%)

Query:   272 RANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQRQKILS 331
             +  KP++EK RR RIN  +  LK+L L+     +   +KLEKADILE+TV  L++Q    
Sbjct:    23 KLRKPIVEKMRRDRINTCIDQLKSL-LEKEFHSHDPSTKLEKADILEMTVSFLKQQIKQQ 81

Query:   332 SDIRSK-YKAGYEECSREVSRFL 353
               I  + +  GY  C RE   FL
Sbjct:    82 QQIPQRDFNEGYSHCWRESVHFL 104


>UNIPROTKB|Q9BYE0 [details] [associations]
            symbol:HES7 "Transcription factor HES-7" species:9606 "Homo
            sapiens" [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0007498 "mesoderm development" evidence=NAS]
            [GO:0005634 "nucleus" evidence=NAS] [GO:0003677 "DNA binding"
            evidence=NAS] [GO:0008134 "transcription factor binding"
            evidence=NAS] InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0007275
            GO:GO:0005634 GO:GO:0006355 GO:GO:0007498 GO:GO:0003677
            GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0008134
            Orphanet:2311 HOGENOM:HOG000236346 KO:K09087 EMBL:AB049064
            EMBL:AC129492 IPI:IPI00000284 RefSeq:NP_115969.2 UniGene:Hs.434828
            ProteinModelPortal:Q9BYE0 SMR:Q9BYE0 STRING:Q9BYE0
            PhosphoSite:Q9BYE0 DMDM:296434525 PRIDE:Q9BYE0 DNASU:84667
            Ensembl:ENST00000317814 GeneID:84667 KEGG:hsa:84667 UCSC:uc002gkc.3
            CTD:84667 GeneCards:GC17M008056 H-InvDB:HIX0202522 HGNC:HGNC:15977
            MIM:608059 MIM:613686 neXtProt:NX_Q9BYE0 PharmGKB:PA29254
            eggNOG:NOG293472 HOVERGEN:HBG096052 InParanoid:Q9BYE0
            OrthoDB:EOG415GFM PhylomeDB:Q9BYE0 GenomeRNAi:84667 NextBio:74661
            ArrayExpress:Q9BYE0 Bgee:Q9BYE0 CleanEx:HS_HES7
            Genevestigator:Q9BYE0 GermOnline:ENSG00000179111 Uniprot:Q9BYE0
        Length = 225

 Score = 137 (53.3 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
 Identities = 34/90 (37%), Positives = 54/90 (60%)

Query:   275 KPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQ--------- 325
             KPL+EKRRR RIN+SL  L+ L+L+  + +N ++ KLEKA+ILE  V +L+         
Sbjct:    17 KPLVEKRRRDRINRSLEELRLLLLERTRDQNLRNPKLEKAEILEFAVGYLRERSRVEPPG 76

Query:   326 --RQKILSSD-IRSKYKAGYEECSREVSRF 352
               R  +  ++ + S Y +G+ EC   ++ F
Sbjct:    77 VPRSPVQDAEALASCYLSGFRECLLRLAAF 106

 Score = 45 (20.9 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
 Identities = 11/38 (28%), Positives = 14/38 (36%)

Query:   543 STSPPCKDDLKSSPPPLSNLDQPLDFSIKRDDSMWRPW 580
             S +P     L   PPP    D      +    + WRPW
Sbjct:   187 SGAPAPLTGLLPPPPPPHRQDGAPKAPLPPPPAFWRPW 224


>ZFIN|ZDB-GENE-030707-2 [details] [associations]
            symbol:her15.1 "hairy and enhancer of split-related
            15.1" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
            activity" evidence=IEA] [GO:0007420 "brain development"
            evidence=IDA] [GO:0007219 "Notch signaling pathway" evidence=IGI]
            [GO:0001654 "eye development" evidence=IDA] [GO:0001756
            "somitogenesis" evidence=IDA] InterPro:IPR011598 Pfam:PF00010
            PROSITE:PS50888 SMART:SM00353 ZFIN:ZDB-GENE-030707-2 GO:GO:0007420
            GO:GO:0007219 GO:GO:0001756 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GO:GO:0001654 GeneTree:ENSGT00700000104168 HOGENOM:HOG000236346
            HOVERGEN:HBG005960 OrthoDB:EOG495ZT5 eggNOG:NOG313575 EMBL:AL929185
            EMBL:BC133128 EMBL:AY264404 EMBL:AY576277 IPI:IPI00495625
            RefSeq:NP_878295.1 RefSeq:XP_003199574.1 UniGene:Dr.117051
            Ensembl:ENSDART00000055707 GeneID:100534909 GeneID:359836
            KEGG:dre:100534909 KEGG:dre:359836 CTD:359836 InParanoid:Q7T3J0
            OMA:PAYMTEY NextBio:20812762 Uniprot:Q7T3J0
        Length = 149

 Score = 132 (51.5 bits), Expect = 5.8e-08, P = 5.8e-08
 Identities = 32/82 (39%), Positives = 49/82 (59%)

Query:   272 RANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQRQKILS 331
             +  KP++EK RR RIN  +  LK++ L+    +   ++KLEKADILE+TV  L +Q++  
Sbjct:    19 KLRKPVVEKMRRDRINNCIEQLKSM-LEKEFQQQDPNAKLEKADILEMTVVFL-KQQLRP 76

Query:   332 SDIRSKYKAGYEECSREVSRFL 353
                ++    GY +C RE   FL
Sbjct:    77 KTPQNAQIEGYSQCWRETISFL 98


>MGI|MGI:2135679 [details] [associations]
            symbol:Hes7 "hairy and enhancer of split 7 (Drosophila)"
            species:10090 "Mus musculus" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IDA]
            [GO:0001501 "skeletal system development" evidence=IMP] [GO:0001756
            "somitogenesis" evidence=IMP] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0007219 "Notch signaling pathway" evidence=IDA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0008134
            "transcription factor binding" evidence=NAS] [GO:0036342 "post-anal
            tail morphogenesis" evidence=IMP] [GO:0045892 "negative regulation
            of transcription, DNA-dependent" evidence=IDA] [GO:0046983 "protein
            dimerization activity" evidence=IEA] [GO:0048511 "rhythmic process"
            evidence=IMP;IDA] InterPro:IPR003650 InterPro:IPR011598
            Pfam:PF00010 PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353
            MGI:MGI:2135679 GO:GO:0005634 GO:GO:0003677 GO:GO:0007219
            GO:GO:0006351 GO:GO:0048511 GO:GO:0000122 GO:GO:0001756
            GO:GO:0001501 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0008134
            GO:GO:0036342 EMBL:AL645527 GeneTree:ENSGT00700000104130
            HOGENOM:HOG000236346 KO:K09087 CTD:84667 eggNOG:NOG293472
            HOVERGEN:HBG096052 OrthoDB:EOG415GFM EMBL:AB049065 EMBL:AB050104
            EMBL:AK050791 EMBL:BC134378 IPI:IPI00115087 RefSeq:NP_149030.2
            UniGene:Mm.98505 ProteinModelPortal:Q8BKT2 SMR:Q8BKT2 STRING:Q8BKT2
            PhosphoSite:Q8BKT2 PRIDE:Q8BKT2 Ensembl:ENSMUST00000024543
            GeneID:84653 KEGG:mmu:84653 UCSC:uc007jpi.1 InParanoid:A3KPD3
            OMA:LSGFREC NextBio:350927 Bgee:Q8BKT2 CleanEx:MM_HES7
            Genevestigator:Q8BKT2 GermOnline:ENSMUSG00000023781 Uniprot:Q8BKT2
        Length = 225

 Score = 136 (52.9 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
 Identities = 35/90 (38%), Positives = 54/90 (60%)

Query:   275 KPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHL-QRQKILSSD 333
             KPL+EKRRR RIN+SL  L+ L+L+  + +N ++ KLEKA+ILE  V +L +R ++    
Sbjct:    17 KPLVEKRRRDRINRSLEELRLLLLERTRDQNLRNPKLEKAEILEFAVGYLRERSRVEPPG 76

Query:   334 I-RSK----------YKAGYEECSREVSRF 352
             + RS           Y +G+ EC   ++ F
Sbjct:    77 VPRSPGQDAEALASCYLSGFRECLLRLAAF 106

 Score = 43 (20.2 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
 Identities = 13/39 (33%), Positives = 16/39 (41%)

Query:   543 STSP-PCKDDLKSSPPPLSNLDQPLDFSIKRDDSMWRPW 580
             S +P P    L   PPP      P   S+    + WRPW
Sbjct:   187 SGAPAPLTGLLPPPPPPYRQDGAPKAPSLP-PPAFWRPW 224


>UNIPROTKB|F8VPC9 [details] [associations]
            symbol:HES7 "Transcription factor HES-7" species:9606 "Homo
            sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
            "protein dimerization activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0001501
            "skeletal system development" evidence=IEA] [GO:0001756
            "somitogenesis" evidence=IEA] [GO:0007219 "Notch signaling pathway"
            evidence=IEA] [GO:0036342 "post-anal tail morphogenesis"
            evidence=IEA] [GO:0048511 "rhythmic process" evidence=IEA]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
            GO:GO:0007219 GO:GO:0006351 GO:GO:0048511 GO:GO:0000122
            GO:GO:0001756 GO:GO:0001501 Gene3D:4.10.280.10 SUPFAM:SSF47459
            KO:K09087 EMBL:AC129492 UniGene:Hs.434828 DNASU:84667 GeneID:84667
            KEGG:hsa:84667 CTD:84667 HGNC:HGNC:15977 GenomeRNAi:84667
            NextBio:74661 OMA:LSGFREC IPI:IPI00790026 RefSeq:NP_001159439.1
            ProteinModelPortal:F8VPC9 SMR:F8VPC9 PRIDE:F8VPC9
            Ensembl:ENST00000541682 UCSC:uc002gkb.2 ArrayExpress:F8VPC9
            Bgee:F8VPC9 Uniprot:F8VPC9
        Length = 230

 Score = 135 (52.6 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
 Identities = 28/56 (50%), Positives = 42/56 (75%)

Query:   275 KPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHL-QRQKI 329
             KPL+EKRRR RIN+SL  L+ L+L+  + +N ++ KLEKA+ILE  V +L +R ++
Sbjct:    17 KPLVEKRRRDRINRSLEELRLLLLERTRDQNLRNPKLEKAEILEFAVGYLRERSRV 72

 Score = 45 (20.9 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
 Identities = 11/38 (28%), Positives = 14/38 (36%)

Query:   543 STSPPCKDDLKSSPPPLSNLDQPLDFSIKRDDSMWRPW 580
             S +P     L   PPP    D      +    + WRPW
Sbjct:   192 SGAPAPLTGLLPPPPPPHRQDGAPKAPLPPPPAFWRPW 229


>ZFIN|ZDB-GENE-000427-6 [details] [associations]
            symbol:her7 "hairy and enhancer of split related-7"
            species:7955 "Danio rerio" [GO:0046983 "protein dimerization
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0001756 "somitogenesis" evidence=IGI;IMP]
            [GO:0001757 "somite specification" evidence=IMP] [GO:0005634
            "nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IGI] InterPro:IPR003650 InterPro:IPR011598
            Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054
            SMART:SM00353 ZFIN:ZDB-GENE-000427-6 GO:GO:0005634 GO:GO:0006355
            GO:GO:0003677 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GO:GO:0001757 EMBL:AF240772 EMBL:BC163871 EMBL:BC163885
            IPI:IPI00507597 RefSeq:NP_571684.1 UniGene:Dr.77721 STRING:Q9I9K1
            GeneID:58132 KEGG:dre:58132 CTD:58132 HOVERGEN:HBG076999
            InParanoid:Q9I9K1 NextBio:20892383 Uniprot:Q9I9K1
        Length = 206

 Score = 139 (54.0 bits), Expect = 1.7e-07, P = 1.7e-07
 Identities = 32/83 (38%), Positives = 49/83 (59%)

Query:   275 KPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQRQKILSSDI 334
             KP +E+RRR R+N+SL  LK L+L   +       +LEKA+ILE TV  LQ+    S + 
Sbjct:    18 KPQVERRRRERMNRSLENLKLLLLQGPEHNQPNQRRLEKAEILEYTVLFLQKANEASKEE 77

Query:   335 ----RSKYKAGYEECSREVSRFL 353
                 +S++  G+  C ++ +RFL
Sbjct:    78 EGEEKSQFMEGFSSCLQKAARFL 100


>UNIPROTKB|E1BJY1 [details] [associations]
            symbol:HES7 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0048511 "rhythmic process" evidence=IEA] [GO:0036342
            "post-anal tail morphogenesis" evidence=IEA] [GO:0007219 "Notch
            signaling pathway" evidence=IEA] [GO:0001756 "somitogenesis"
            evidence=IEA] [GO:0001501 "skeletal system development"
            evidence=IEA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0046983 "protein dimerization activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
            GO:GO:0007219 GO:GO:0006351 GO:GO:0048511 GO:GO:0000122
            GO:GO:0001756 GO:GO:0001501 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GeneTree:ENSGT00700000104130 OMA:LSGFREC EMBL:DAAA02048812
            IPI:IPI00704475 Ensembl:ENSBTAT00000016506 Uniprot:E1BJY1
        Length = 224

 Score = 138 (53.6 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
 Identities = 35/92 (38%), Positives = 56/92 (60%)

Query:   275 KPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHL-QRQKIL--- 330
             KPL+EKRRR RIN+SL  L+ L+L+  + +N ++ KLEKA+ILE  V +L +R ++    
Sbjct:    17 KPLVEKRRRDRINRSLEELRLLLLERTRDQNLRNPKLEKAEILEFAVGYLRERSRVEPPG 76

Query:   331 -----SSD---IRSKYKAGYEECSREVSRFLE 354
                  + D   + S Y +G+ EC   ++ F +
Sbjct:    77 VPRSPAQDAEALASCYLSGFRECLLRLAAFAQ 108

 Score = 38 (18.4 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
 Identities = 8/25 (32%), Positives = 9/25 (36%)

Query:   556 PPPLSNLDQPLDFSIKRDDSMWRPW 580
             PPP    D           + WRPW
Sbjct:   199 PPPPHRQDGAPKAPPPPPPAFWRPW 223


>RGD|1305914 [details] [associations]
            symbol:Hes7 "hairy and enhancer of split 7 (Drosophila)"
            species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
            of transcription from RNA polymerase II promoter" evidence=IEA;ISO]
            [GO:0001501 "skeletal system development" evidence=IEA;ISO]
            [GO:0001756 "somitogenesis" evidence=IEA;ISO] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0007219 "Notch signaling pathway" evidence=IEA;ISO] [GO:0036342
            "post-anal tail morphogenesis" evidence=IEA;ISO] [GO:0045892
            "negative regulation of transcription, DNA-dependent" evidence=ISO]
            [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0048511 "rhythmic process" evidence=IEA;ISO] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 PROSITE:PS51054
            SMART:SM00353 RGD:1305914 GO:GO:0005634 GO:GO:0003677 GO:GO:0007219
            GO:GO:0006351 GO:GO:0048511 GO:GO:0000122 GO:GO:0001756
            GO:GO:0001501 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CH473948
            GeneTree:ENSGT00700000104130 KO:K09087 CTD:84667 OrthoDB:EOG415GFM
            OMA:LSGFREC IPI:IPI00369659 RefSeq:NP_001099262.1 UniGene:Rn.218470
            Ensembl:ENSRNOT00000009757 GeneID:287423 KEGG:rno:287423
            UCSC:RGD:1305914 NextBio:626093 Uniprot:D3ZV20
        Length = 225

 Score = 136 (52.9 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
 Identities = 35/90 (38%), Positives = 54/90 (60%)

Query:   275 KPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHL-QRQKILSSD 333
             KPL+EKRRR RIN+SL  L+ L+L+  + +N ++ KLEKA+ILE  V +L +R ++    
Sbjct:    17 KPLVEKRRRDRINRSLEELRLLLLERTRDQNLRNPKLEKAEILEFAVGYLRERSRVEPPG 76

Query:   334 I-RSK----------YKAGYEECSREVSRF 352
             + RS           Y +G+ EC   ++ F
Sbjct:    77 VPRSPGQDAEALASCYLSGFRECLLRLAAF 106

 Score = 40 (19.1 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
 Identities = 13/48 (27%), Positives = 18/48 (37%)

Query:   537 PNYMAP----STSPPCKDDLKSSPPPLSNLDQPLDFSIKRDDSMWRPW 580
             P++ +P    S +P     L   PPP    D           + WRPW
Sbjct:   177 PSHCSPRAGDSGAPAPLTGLLPPPPPPYRQDGAPKAPPLPPPAFWRPW 224


>ZFIN|ZDB-GENE-030828-5 [details] [associations]
            symbol:hes6 "hairy and enhancer of split 6
            (Drosophila)" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
            activity" evidence=IEA] [GO:0001756 "somitogenesis"
            evidence=IGI;IMP] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0017053
            "transcriptional repressor complex" evidence=IC] [GO:0046982
            "protein heterodimerization activity" evidence=IPI] [GO:0045892
            "negative regulation of transcription, DNA-dependent"
            evidence=IGI;IDA] InterPro:IPR003650 InterPro:IPR011598
            Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054
            SMART:SM00353 ZFIN:ZDB-GENE-030828-5 GO:GO:0017053 GO:GO:0045892
            GO:GO:0003677 GO:GO:0006351 GO:GO:0001756 Gene3D:4.10.280.10
            SUPFAM:SSF47459 HOVERGEN:HBG107098 EMBL:AB097830 IPI:IPI00503698
            UniGene:Dr.19467 ProteinModelPortal:Q7T2V8 STRING:Q7T2V8
            InParanoid:Q7T2V8 ArrayExpress:Q7T2V8 Uniprot:Q7T2V8
        Length = 226

 Score = 124 (48.7 bits), Expect = 3.2e-07, Sum P(3) = 3.2e-07
 Identities = 31/93 (33%), Positives = 52/93 (55%)

Query:   271 KRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQ---RQ 327
             ++  KPL+EK+RRARIN+SL  L+ L+ D          K E A++LE+TV+ ++   + 
Sbjct:    20 RKTRKPLVEKKRRARINESLQELRLLLADP-----DAQVKXENAEVLEMTVKRVESILQN 74

Query:   328 KILSSD-----IRSKYKAGYEECSREVSRFLET 355
             K   +D        ++ AGY +C  +V  F+ +
Sbjct:    75 KAKEADSVNREANERFAAGYIQCMHDVHTFVSS 107

 Score = 46 (21.3 bits), Expect = 3.2e-07, Sum P(3) = 3.2e-07
 Identities = 16/48 (33%), Positives = 24/48 (50%)

Query:   541 APSTSPP---CKD----DLKSSPPPLSNLDQ-PLDFSIKRDDSMWRPW 580
             APST+     C D    D + S   +   DQ P+  ++  + S+WRPW
Sbjct:   179 APSTTSSDDICSDLDDTDTEHSRISVDAGDQAPVVPTLYTNKSIWRPW 226

 Score = 39 (18.8 bits), Expect = 3.2e-07, Sum P(3) = 3.2e-07
 Identities = 8/19 (42%), Positives = 10/19 (52%)

Query:   401 PVIDSGVRQRLFRHLENCM 419
             P ID+ +   L  HL  CM
Sbjct:   109 PGIDATIAADLLNHLLECM 127


>UNIPROTKB|F1SSX6 [details] [associations]
            symbol:HES7 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0048511 "rhythmic process" evidence=IEA] [GO:0036342
            "post-anal tail morphogenesis" evidence=IEA] [GO:0007219 "Notch
            signaling pathway" evidence=IEA] [GO:0001756 "somitogenesis"
            evidence=IEA] [GO:0001501 "skeletal system development"
            evidence=IEA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0046983 "protein dimerization activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
            GO:GO:0007219 GO:GO:0006351 GO:GO:0048511 GO:GO:0000122
            GO:GO:0001756 GO:GO:0001501 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GeneTree:ENSGT00700000104130 KO:K09087 OMA:LSGFREC EMBL:CU571295
            EMBL:CU914306 RefSeq:XP_003358331.2 Ensembl:ENSSSCT00000019568
            GeneID:100620745 KEGG:ssc:100620745 Uniprot:F1SSX6
        Length = 225

 Score = 137 (53.3 bits), Expect = 6.5e-07, P = 6.5e-07
 Identities = 35/90 (38%), Positives = 55/90 (61%)

Query:   275 KPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHL-QRQKIL--- 330
             KPL+EKRRR RIN+SL  L+ L+L+  + +N ++ KLEKA+ILE  V +L +R ++    
Sbjct:    17 KPLVEKRRRDRINRSLEELRLLLLERTRDQNLRNPKLEKAEILEFAVGYLRERSRVEPPG 76

Query:   331 -----SSD---IRSKYKAGYEECSREVSRF 352
                  + D   + S Y +G+ EC   ++ F
Sbjct:    77 VPRSPAQDAEALASCYLSGFRECLLRLAAF 106


>UNIPROTKB|B8ZZA9 [details] [associations]
            symbol:HES6 "Transcription cofactor HES-6" species:9606
            "Homo sapiens" [GO:0046983 "protein dimerization activity"
            evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
            SMART:SM00353 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC016757
            HGNC:HGNC:18254 ChiTaRS:HES6 IPI:IPI00916699
            ProteinModelPortal:B8ZZA9 SMR:B8ZZA9 STRING:B8ZZA9 PRIDE:B8ZZA9
            Ensembl:ENST00000409574 ArrayExpress:B8ZZA9 Bgee:B8ZZA9
            Uniprot:B8ZZA9
        Length = 112

 Score = 122 (48.0 bits), Expect = 7.0e-07, P = 7.0e-07
 Identities = 33/81 (40%), Positives = 50/81 (61%)

Query:   271 KRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQRQKIL 330
             ++A KPL+EK+RRARIN+SL  L+ L+L  A+ +    +KLE A++LELT     R+K  
Sbjct:    26 RKARKPLVEKKRRARINESLQELR-LLLAGAEVQ----AKLENAEVLELTSASSCRRKRA 80

Query:   331 SSDIRSKYKAGYEECSREVSR 351
             S+ + +   A    C+R   R
Sbjct:    81 SASLPATSSA-CTRCTRSCPR 100


>FB|FBgn0002609 [details] [associations]
            symbol:E(spl)m3-HLH "Enhancer of split m3, helix-loop-helix"
            species:7227 "Drosophila melanogaster" [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=NAS;TAS] [GO:0005634 "nucleus" evidence=NAS] [GO:0043565
            "sequence-specific DNA binding" evidence=IDA] [GO:0048749 "compound
            eye development" evidence=TAS] [GO:0003677 "DNA binding"
            evidence=NAS] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=NAS] [GO:0007219 "Notch
            signaling pathway" evidence=NAS] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
            dimerization activity" evidence=IEA] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 PROSITE:PS51054
            SMART:SM00353 EMBL:AE014297 GO:GO:0005634 GO:GO:0007399
            GO:GO:0030154 GO:GO:0043565 GO:GO:0007219 GO:GO:0003700
            GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048749
            InterPro:IPR018352 SMART:SM00511 GeneTree:ENSGT00700000104130
            KO:K09090 EMBL:AY779906 EMBL:AY779907 EMBL:AY779908 EMBL:AY779909
            EMBL:AY779910 EMBL:AY779911 EMBL:AY779912 EMBL:AY779913
            EMBL:AY779914 EMBL:AY779915 EMBL:AY779916 EMBL:AY779917
            EMBL:AY779918 EMBL:AY779919 EMBL:AY779920 EMBL:AY779921 EMBL:M96165
            EMBL:X67046 EMBL:AY094858 PIR:D46177 RefSeq:NP_524509.2
            UniGene:Dm.4542 ProteinModelPortal:Q01068 SMR:Q01068 DIP:DIP-356N
            IntAct:Q01068 MINT:MINT-314506 STRING:Q01068 PRIDE:Q01068
            EnsemblMetazoa:FBtr0084958 GeneID:43156 KEGG:dme:Dmel_CG8346
            CTD:43156 FlyBase:FBgn0002609 eggNOG:NOG264490 InParanoid:Q5S455
            OMA:GASEPVW OrthoDB:EOG47M0F3 PhylomeDB:Q01068 GenomeRNAi:43156
            NextBio:832457 Bgee:Q01068 GermOnline:CG8346 Uniprot:Q01068
        Length = 224

 Score = 136 (52.9 bits), Expect = 8.3e-07, P = 8.3e-07
 Identities = 28/58 (48%), Positives = 43/58 (74%)

Query:   271 KRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQRQK 328
             ++  KPL+E++RRARIN+ L  LK L+++  + E    ++LEKADILELTV H+++ K
Sbjct:    12 RKVMKPLLERKRRARINKCLDDLKDLMVECLQQEGEHVTRLEKADILELTVDHMRKLK 69


>FB|FBgn0027788 [details] [associations]
            symbol:Hey "Hairy/E(spl)-related with YRPW motif"
            species:7227 "Drosophila melanogaster" [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=ISS] [GO:0045746 "negative
            regulation of Notch signaling pathway" evidence=ISS]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 EMBL:AE013599
            GO:GO:0007275 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
            GO:GO:0007219 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
            InterPro:IPR018352 SMART:SM00511 GO:GO:0045746
            GeneTree:ENSGT00700000104130 eggNOG:NOG241271 KO:K09091
            EMBL:AF151523 EMBL:BT029144 RefSeq:NP_523657.1 UniGene:Dm.516
            ProteinModelPortal:Q7KM13 SMR:Q7KM13 IntAct:Q7KM13 STRING:Q7KM13
            PRIDE:Q7KM13 EnsemblMetazoa:FBtr0088869 GeneID:35764
            KEGG:dme:Dmel_CG11194 CTD:100188776 FlyBase:FBgn0027788
            InParanoid:Q7KM13 OMA:TIEGMDI OrthoDB:EOG4MPG67 PhylomeDB:Q7KM13
            GenomeRNAi:35764 NextBio:795108 Bgee:Q7KM13 Uniprot:Q7KM13
        Length = 425

 Score = 143 (55.4 bits), Expect = 8.6e-07, P = 8.6e-07
 Identities = 54/161 (33%), Positives = 83/161 (51%)

Query:   207 SEHSGDGNNNIG-TPDSSTGCQTKPRSTVKKDTHSPPLKRSLNKTLVVMSSPPLVASSNS 265
             S HS   N++ G +   S G  +  R+  + D      + S +K  +  S P     S  
Sbjct:    43 SHHSAHSNHSHGHSQGHSHGIGSLKRTLSESDCDDLYSEES-SKEQISPSEP----GSCQ 97

Query:   266 IPPALKRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQ 325
             +    KR  + ++EK+RR RIN SL  LK L+  + + + +  +KLEKA+IL+LTV HL+
Sbjct:    98 LMSRKKR--RGVIEKKRRDRINSSLTELKRLVPSAYEKQGS--AKLEKAEILQLTVEHLK 153

Query:   326 --RQKILSS---D---IRSKYKA-GYEECSREVSRFLETPE 357
               + K L S   D   +   Y   G+ EC+ EV+R+L T E
Sbjct:   154 SLQSKTLDSLSYDPQRVAMDYHIIGFRECAAEVARYLVTIE 194


>ZFIN|ZDB-GENE-030131-7074 [details] [associations]
            symbol:heyl "hairy/enhancer-of-split related with
            YRPW motif-like" species:7955 "Danio rerio" [GO:0046983 "protein
            dimerization activity" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0007219 "Notch signaling pathway" evidence=IEA]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353
            ZFIN:ZDB-GENE-030131-7074 GO:GO:0007275 GO:GO:0005634 GO:GO:0006355
            GO:GO:0003677 GO:GO:0007219 GO:GO:0006351 Gene3D:4.10.280.10
            SUPFAM:SSF47459 InterPro:IPR018352 SMART:SM00511
            GeneTree:ENSGT00700000104130 HOGENOM:HOG000286035
            HOVERGEN:HBG003275 KO:K09091 CTD:26508 eggNOG:NOG310123
            OrthoDB:EOG4P8FJZ EMBL:AJ510222 EMBL:CR318628 IPI:IPI00837045
            RefSeq:NP_859425.1 UniGene:Dr.82032 ProteinModelPortal:Q8AXV5
            SMR:Q8AXV5 STRING:Q8AXV5 Ensembl:ENSDART00000078197 GeneID:335134
            KEGG:dre:335134 InParanoid:Q8AXV5 OMA:FRECVGE NextBio:20810685
            Bgee:Q8AXV5 Uniprot:Q8AXV5
        Length = 310

 Score = 130 (50.8 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
 Identities = 35/95 (36%), Positives = 57/95 (60%)

Query:   271 KRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQRQKIL 330
             ++  + ++EKRRR RIN SL+ L+ L+  + + + +  SKLEKA+IL++TV HL+    +
Sbjct:    44 RKKRRGIIEKRRRDRINHSLSELRRLVPSAFEKQGS--SKLEKAEILQMTVDHLKLLHAM 101

Query:   331 SS----DIRS---KYKA-GYEECSREVSRFLETPE 357
                   D R+    Y+  G+ EC  EV R+L + E
Sbjct:   102 GGKGYFDARALAVDYRTLGFRECVGEVVRYLSSLE 136

 Score = 48 (22.0 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
 Identities = 16/50 (32%), Positives = 22/50 (44%)

Query:   410 RLFRHLENCMSEIDLDFSASAEKLGITQDFSSEDDSAFPMLRVRPEPDSS 459
             RL  HL +C SE+D    + A        F     ++FP L+    P SS
Sbjct:   147 RLVSHLSHCASELDPLLQSPA-----ALPFPPWPWASFPQLQAASPPASS 191


>MGI|MGI:1860511 [details] [associations]
            symbol:Heyl "hairy/enhancer-of-split related with YRPW
            motif-like" species:10090 "Mus musculus" [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=IDA] [GO:0000979 "RNA polymerase II core promoter
            sequence-specific DNA binding" evidence=IDA] [GO:0000983 "RNA
            polymerase II core promoter sequence-specific DNA binding
            transcription factor activity" evidence=IDA] [GO:0000988 "protein
            binding transcription factor activity" evidence=ISO] [GO:0001077
            "RNA polymerase II core promoter proximal region sequence-specific
            DNA binding transcription factor activity involved in positive
            regulation of transcription" evidence=IDA] [GO:0001106 "RNA
            polymerase II transcription corepressor activity" evidence=IDA]
            [GO:0003151 "outflow tract morphogenesis" evidence=IGI] [GO:0003181
            "atrioventricular valve morphogenesis" evidence=IGI] [GO:0003184
            "pulmonary valve morphogenesis" evidence=IGI] [GO:0003198
            "epithelial to mesenchymal transition involved in endocardial
            cushion formation" evidence=IGI] [GO:0003203 "endocardial cushion
            morphogenesis" evidence=IGI] [GO:0003208 "cardiac ventricle
            morphogenesis" evidence=IMP] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISO;ISS] [GO:0003714
            "transcription corepressor activity" evidence=ISO] [GO:0005515
            "protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO]
            [GO:0005667 "transcription factor complex" evidence=ISS]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
            of transcription from RNA polymerase II promoter" evidence=ISS;IDA]
            [GO:0007219 "Notch signaling pathway" evidence=ISO;TAS] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0007422
            "peripheral nervous system development" evidence=NAS] [GO:0010629
            "negative regulation of gene expression" evidence=IMP] [GO:0014031
            "mesenchymal cell development" evidence=IGI] [GO:0035914 "skeletal
            muscle cell differentiation" evidence=IMP] [GO:0035939
            "microsatellite binding" evidence=ISO] [GO:0042803 "protein
            homodimerization activity" evidence=IDA] [GO:0043565
            "sequence-specific DNA binding" evidence=IDA] [GO:0045666 "positive
            regulation of neuron differentiation" evidence=IMP;IDA] [GO:0045892
            "negative regulation of transcription, DNA-dependent"
            evidence=ISO;IMP] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=ISO;IGI;IDA] [GO:0046982
            "protein heterodimerization activity" evidence=ISO] [GO:0046983
            "protein dimerization activity" evidence=IEA] [GO:0050683 "AF-1
            domain binding" evidence=ISO] [GO:0060317 "cardiac epithelial to
            mesenchymal transition" evidence=IGI] [GO:0060412 "ventricular
            septum morphogenesis" evidence=IGI] [GO:0060766 "negative
            regulation of androgen receptor signaling pathway" evidence=ISO]
            [GO:2000824 "negative regulation of androgen receptor activity"
            evidence=ISO] InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010
            Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353
            MGI:MGI:1860511 GO:GO:0005737 GO:GO:0042803 EMBL:AL606934
            GO:GO:0007219 GO:GO:0007422 Reactome:REACT_115202 GO:GO:0005667
            GO:GO:0001077 GO:GO:0071773 GO:GO:0045666 Gene3D:4.10.280.10
            SUPFAM:SSF47459 GO:GO:0032835 GO:GO:0035914 GO:GO:0000979
            GO:GO:0001106 GO:GO:0003151 GO:GO:0000983 GO:GO:0072014
            InterPro:IPR018352 SMART:SM00511 GO:GO:0003181 GO:GO:0060412
            GO:GO:0060766 GeneTree:ENSGT00700000104130 GO:GO:0003198
            GO:GO:2000824 HOGENOM:HOG000286035 HOVERGEN:HBG003275 KO:K09091
            GO:GO:0035939 GO:GO:0003208 GO:GO:0003184 CTD:26508
            eggNOG:NOG310123 OMA:HSWVSEI OrthoDB:EOG4P8FJZ EMBL:AF172288
            EMBL:AJ271868 EMBL:AB093590 EMBL:AK004697 EMBL:AK028596
            EMBL:AK080822 EMBL:BC130263 IPI:IPI00471352 RefSeq:NP_038933.2
            UniGene:Mm.103615 ProteinModelPortal:Q9DBX7 SMR:Q9DBX7
            IntAct:Q9DBX7 STRING:Q9DBX7 PhosphoSite:Q9DBX7 PRIDE:Q9DBX7
            Ensembl:ENSMUST00000040821 GeneID:56198 KEGG:mmu:56198
            UCSC:uc008uoz.1 InParanoid:Q9DBX7 NextBio:312018 Bgee:Q9DBX7
            Genevestigator:Q9DBX7 Uniprot:Q9DBX7
        Length = 326

 Score = 138 (53.6 bits), Expect = 1.8e-06, P = 1.8e-06
 Identities = 48/146 (32%), Positives = 73/146 (50%)

Query:   229 KPRSTVKKDTHSP-PLKRSLNKTLVVMSSPPLVASSNSIPPALKRANKPLMEKRRRARIN 287
             +PR+    D  S  P+       L  M+ P    S + +    KR  + ++EKRRR RIN
Sbjct:     3 RPRAPSGSDGESDGPIDVGQENDLSQMARPLTTPSPSQMQARKKR--RGIIEKRRRDRIN 60

Query:   288 QSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQR-----------QKILSSDIRS 336
              SL+ L+ L+  + + + +  SKLEKA++L++TV HL+             + L+ D RS
Sbjct:    61 SSLSELRRLVPTAFEKQGS--SKLEKAEVLQMTVDHLKMLHASGGTGFFDARALAVDFRS 118

Query:   337 KYKAGYEECSREVSRFL---ETPELH 359
                 G+ EC  EV R+L   E P  H
Sbjct:   119 ---IGFRECLTEVIRYLGVLEGPSSH 141


>RGD|1305022 [details] [associations]
            symbol:Heyl "hairy/enhancer-of-split related with YRPW
            motif-like" species:10116 "Rattus norvegicus" [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=ISO] [GO:0000979 "RNA polymerase II core promoter
            sequence-specific DNA binding" evidence=ISO] [GO:0000983 "RNA
            polymerase II core promoter sequence-specific DNA binding
            transcription factor activity" evidence=ISO] [GO:0000988 "protein
            binding transcription factor activity" evidence=ISO] [GO:0001077
            "RNA polymerase II core promoter proximal region sequence-specific
            DNA binding transcription factor activity involved in positive
            regulation of transcription" evidence=ISO] [GO:0001106 "RNA
            polymerase II transcription corepressor activity" evidence=ISO]
            [GO:0003151 "outflow tract morphogenesis" evidence=ISO] [GO:0003181
            "atrioventricular valve morphogenesis" evidence=ISO] [GO:0003184
            "pulmonary valve morphogenesis" evidence=ISO] [GO:0003198
            "epithelial to mesenchymal transition involved in endocardial
            cushion formation" evidence=ISO] [GO:0003203 "endocardial cushion
            morphogenesis" evidence=ISO] [GO:0003208 "cardiac ventricle
            morphogenesis" evidence=ISO] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISO] [GO:0003714
            "transcription corepressor activity" evidence=ISO] [GO:0005634
            "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0006357 "regulation of transcription from RNA
            polymerase II promoter" evidence=ISO] [GO:0007219 "Notch signaling
            pathway" evidence=ISO] [GO:0010629 "negative regulation of gene
            expression" evidence=ISO] [GO:0014031 "mesenchymal cell
            development" evidence=ISO] [GO:0035914 "skeletal muscle cell
            differentiation" evidence=ISO] [GO:0035939 "microsatellite binding"
            evidence=ISO] [GO:0042803 "protein homodimerization activity"
            evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
            evidence=ISO] [GO:0045666 "positive regulation of neuron
            differentiation" evidence=ISO] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=ISO] [GO:0046982 "protein heterodimerization activity"
            evidence=ISO] [GO:0046983 "protein dimerization activity"
            evidence=IEA] [GO:0050683 "AF-1 domain binding" evidence=ISO]
            [GO:0060317 "cardiac epithelial to mesenchymal transition"
            evidence=ISO] [GO:0060412 "ventricular septum morphogenesis"
            evidence=ISO] [GO:0060766 "negative regulation of androgen receptor
            signaling pathway" evidence=ISO] [GO:2000824 "negative regulation
            of androgen receptor activity" evidence=ISO] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 RGD:1305022 GO:GO:0005634
            GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 Gene3D:4.10.280.10
            SUPFAM:SSF47459 InterPro:IPR018352 SMART:SM00511 EMBL:CH473968
            GeneTree:ENSGT00700000104130 KO:K09091 CTD:26508 OMA:HSWVSEI
            OrthoDB:EOG4P8FJZ EMBL:AC114512 IPI:IPI00209608
            RefSeq:NP_001101447.1 UniGene:Rn.22252 Ensembl:ENSRNOT00000020929
            GeneID:313575 KEGG:rno:313575 UCSC:RGD:1305022 NextBio:666458
            Uniprot:D3ZIH3
        Length = 326

 Score = 138 (53.6 bits), Expect = 1.8e-06, P = 1.8e-06
 Identities = 48/146 (32%), Positives = 73/146 (50%)

Query:   229 KPRSTVKKDTHSP-PLKRSLNKTLVVMSSPPLVASSNSIPPALKRANKPLMEKRRRARIN 287
             +PR+    D  S  P+       L  M+ P    S + +    KR  + ++EKRRR RIN
Sbjct:     3 RPRAPSGSDGESDGPIDVGQENDLSQMARPLTTPSPSQMQARKKR--RGIIEKRRRDRIN 60

Query:   288 QSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQR-----------QKILSSDIRS 336
              SL+ L+ L+  + + + +  SKLEKA++L++TV HL+             + L+ D RS
Sbjct:    61 SSLSELRRLVPTAFEKQGS--SKLEKAEVLQMTVDHLKMLHASGGAGFFDARALAVDFRS 118

Query:   337 KYKAGYEECSREVSRFL---ETPELH 359
                 G+ EC  EV R+L   E P  H
Sbjct:   119 ---IGFRECLTEVVRYLGVLEGPSSH 141


>UNIPROTKB|I3LJW8 [details] [associations]
            symbol:HEYL "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:2000824 "negative regulation of androgen receptor
            activity" evidence=IEA] [GO:0072014 "proximal tubule development"
            evidence=IEA] [GO:0071773 "cellular response to BMP stimulus"
            evidence=IEA] [GO:0060766 "negative regulation of androgen receptor
            signaling pathway" evidence=IEA] [GO:0060412 "ventricular septum
            morphogenesis" evidence=IEA] [GO:0050683 "AF-1 domain binding"
            evidence=IEA] [GO:0046982 "protein heterodimerization activity"
            evidence=IEA] [GO:0045666 "positive regulation of neuron
            differentiation" evidence=IEA] [GO:0042803 "protein
            homodimerization activity" evidence=IEA] [GO:0035939
            "microsatellite binding" evidence=IEA] [GO:0032835 "glomerulus
            development" evidence=IEA] [GO:0007219 "Notch signaling pathway"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003208
            "cardiac ventricle morphogenesis" evidence=IEA] [GO:0003198
            "epithelial to mesenchymal transition involved in endocardial
            cushion formation" evidence=IEA] [GO:0003184 "pulmonary valve
            morphogenesis" evidence=IEA] [GO:0003181 "atrioventricular valve
            morphogenesis" evidence=IEA] [GO:0003151 "outflow tract
            morphogenesis" evidence=IEA] [GO:0001106 "RNA polymerase II
            transcription corepressor activity" evidence=IEA] [GO:0001077 "RNA
            polymerase II core promoter proximal region sequence-specific DNA
            binding transcription factor activity involved in positive
            regulation of transcription" evidence=IEA] [GO:0000983 "RNA
            polymerase II core promoter sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0000979 "RNA
            polymerase II core promoter sequence-specific DNA binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0005634
            GO:GO:0005737 GO:GO:0007219 GO:GO:0001077 GO:GO:0071773
            GO:GO:0045666 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0032835
            GO:GO:0000979 GO:GO:0001106 GO:GO:0000983 GO:GO:0072014
            InterPro:IPR018352 SMART:SM00511 GO:GO:0060766
            GeneTree:ENSGT00700000104130 GO:GO:0003198 GO:GO:2000824 KO:K09091
            GO:GO:0035939 OMA:HSWVSEI EMBL:CR956427 EMBL:CR956622
            RefSeq:XP_003127874.3 Ensembl:ENSSSCT00000023745 GeneID:100518256
            KEGG:ssc:100518256 Uniprot:I3LJW8
        Length = 328

 Score = 136 (52.9 bits), Expect = 3.1e-06, P = 3.1e-06
 Identities = 45/137 (32%), Positives = 70/137 (51%)

Query:   229 KPRSTVKKDTHSP-PLKRSLNKTLVVMSSPPLVASSNSIPPALKRANKPLMEKRRRARIN 287
             +PR     D+ S  P+       L  M+ P    S + +    KR  + ++EKRRR RIN
Sbjct:     3 RPREPSSSDSESDGPIDVGREGELSQMARPLSTPSPSQMQARKKR--RGIIEKRRRDRIN 60

Query:   288 QSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQR-----------QKILSSDIRS 336
              SL+ L+ L+  + + + +  SKLEKA++L++TV HL+             + L+ D RS
Sbjct:    61 SSLSELRRLVPTAFEKQGS--SKLEKAEVLQMTVDHLKMLHATGGTGFFDARALAVDFRS 118

Query:   337 KYKAGYEECSREVSRFL 353
                 G+ EC  EV R+L
Sbjct:   119 ---IGFRECLTEVIRYL 132


>UNIPROTKB|E2R9J1 [details] [associations]
            symbol:PABPC4 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 GO:GO:0005634 GO:GO:0006355
            GO:GO:0003677 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
            InterPro:IPR018352 SMART:SM00511 KO:K09091 CTD:26508
            GeneTree:ENSGT00640000091232 EMBL:AAEX03009572 RefSeq:XP_849702.1
            Ensembl:ENSCAFT00000004941 GeneID:607804 KEGG:cfa:607804
            NextBio:20893507 Uniprot:E2R9J1
        Length = 326

 Score = 134 (52.2 bits), Expect = 5.1e-06, P = 5.1e-06
 Identities = 45/137 (32%), Positives = 70/137 (51%)

Query:   229 KPRSTVKKDTHSP-PLKRSLNKTLVVMSSPPLVASSNSIPPALKRANKPLMEKRRRARIN 287
             +PR     D+ S  P+       L  M+ P    S + +    KR  + ++EKRRR RIN
Sbjct:     3 RPREPSGSDSESDGPIDVGREGELSQMARPLSTPSPSQMQARKKR--RGIIEKRRRDRIN 60

Query:   288 QSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQR-----------QKILSSDIRS 336
              SL+ L+ L+  + + + +  SKLEKA++L++TV HL+             + L+ D RS
Sbjct:    61 SSLSELRRLVPTAFEKQGS--SKLEKAEVLQMTVDHLKMLHATGGTGFFDARALAVDFRS 118

Query:   337 KYKAGYEECSREVSRFL 353
                 G+ EC  EV R+L
Sbjct:   119 ---IGFRECLTEVIRYL 132


>UNIPROTKB|Q2NL18 [details] [associations]
            symbol:HEYL "Hairy/enhancer-of-split related with YRPW
            motif-like protein" species:9913 "Bos taurus" [GO:0005634 "nucleus"
            evidence=IEA] [GO:2000824 "negative regulation of androgen receptor
            activity" evidence=IEA] [GO:0072014 "proximal tubule development"
            evidence=IEA] [GO:0071773 "cellular response to BMP stimulus"
            evidence=IEA] [GO:0060766 "negative regulation of androgen receptor
            signaling pathway" evidence=IEA] [GO:0060412 "ventricular septum
            morphogenesis" evidence=IEA] [GO:0050683 "AF-1 domain binding"
            evidence=IEA] [GO:0046982 "protein heterodimerization activity"
            evidence=IEA] [GO:0045666 "positive regulation of neuron
            differentiation" evidence=IEA] [GO:0042803 "protein
            homodimerization activity" evidence=IEA] [GO:0035939
            "microsatellite binding" evidence=IEA] [GO:0032835 "glomerulus
            development" evidence=IEA] [GO:0007219 "Notch signaling pathway"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003208
            "cardiac ventricle morphogenesis" evidence=IEA] [GO:0003198
            "epithelial to mesenchymal transition involved in endocardial
            cushion formation" evidence=IEA] [GO:0003184 "pulmonary valve
            morphogenesis" evidence=IEA] [GO:0003181 "atrioventricular valve
            morphogenesis" evidence=IEA] [GO:0003151 "outflow tract
            morphogenesis" evidence=IEA] [GO:0001106 "RNA polymerase II
            transcription corepressor activity" evidence=IEA] [GO:0001077 "RNA
            polymerase II core promoter proximal region sequence-specific DNA
            binding transcription factor activity involved in positive
            regulation of transcription" evidence=IEA] [GO:0000983 "RNA
            polymerase II core promoter sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0000979 "RNA
            polymerase II core promoter sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010
            Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353
            GO:GO:0005634 GO:GO:0005737 GO:GO:0007219 GO:GO:0001077
            GO:GO:0071773 GO:GO:0045666 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GO:GO:0032835 GO:GO:0000979 GO:GO:0001106 GO:GO:0000983
            GO:GO:0072014 InterPro:IPR018352 SMART:SM00511 GO:GO:0060766
            GO:GO:0003198 GO:GO:2000824 HOGENOM:HOG000286035 HOVERGEN:HBG003275
            KO:K09091 GO:GO:0035939 EMBL:BT021889 EMBL:BC111205 IPI:IPI00711062
            IPI:IPI00847112 RefSeq:NP_001019736.2 UniGene:Bt.34222
            ProteinModelPortal:Q2NL18 SMR:Q2NL18 GeneID:538609 KEGG:bta:538609
            CTD:26508 eggNOG:NOG310123 InParanoid:Q2NL18 OMA:HSWVSEI
            OrthoDB:EOG4P8FJZ NextBio:20877472 ArrayExpress:Q2NL18
            Uniprot:Q2NL18
        Length = 328

 Score = 134 (52.2 bits), Expect = 5.1e-06, P = 5.1e-06
 Identities = 45/137 (32%), Positives = 70/137 (51%)

Query:   229 KPRSTVKKDTHSP-PLKRSLNKTLVVMSSPPLVASSNSIPPALKRANKPLMEKRRRARIN 287
             +PR     D+ S  P+       L  M+ P    S + +    KR  + ++EKRRR RIN
Sbjct:     3 RPREPSGSDSESDGPIDVGREGELSQMARPLSTPSPSQMQARKKR--RGIIEKRRRDRIN 60

Query:   288 QSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQR-----------QKILSSDIRS 336
              SL+ L+ L+  + + + +  SKLEKA++L++TV HL+             + L+ D RS
Sbjct:    61 SSLSELRRLVPTAFEKQGS--SKLEKAEVLQMTVDHLKMLHATGGTGFFDARALAVDFRS 118

Query:   337 KYKAGYEECSREVSRFL 353
                 G+ EC  EV R+L
Sbjct:   119 ---IGFRECLTEVIRYL 132


>UNIPROTKB|G3X6Q3 [details] [associations]
            symbol:HEYL "Hairy/enhancer-of-split-related with YRPW
            motif-like protein" species:9913 "Bos taurus" [GO:2000824 "negative
            regulation of androgen receptor activity" evidence=IEA] [GO:0072014
            "proximal tubule development" evidence=IEA] [GO:0071773 "cellular
            response to BMP stimulus" evidence=IEA] [GO:0060766 "negative
            regulation of androgen receptor signaling pathway" evidence=IEA]
            [GO:0060412 "ventricular septum morphogenesis" evidence=IEA]
            [GO:0050683 "AF-1 domain binding" evidence=IEA] [GO:0046982
            "protein heterodimerization activity" evidence=IEA] [GO:0045666
            "positive regulation of neuron differentiation" evidence=IEA]
            [GO:0042803 "protein homodimerization activity" evidence=IEA]
            [GO:0035939 "microsatellite binding" evidence=IEA] [GO:0032835
            "glomerulus development" evidence=IEA] [GO:0007219 "Notch signaling
            pathway" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0003208 "cardiac ventricle morphogenesis" evidence=IEA]
            [GO:0003198 "epithelial to mesenchymal transition involved in
            endocardial cushion formation" evidence=IEA] [GO:0003184 "pulmonary
            valve morphogenesis" evidence=IEA] [GO:0003181 "atrioventricular
            valve morphogenesis" evidence=IEA] [GO:0003151 "outflow tract
            morphogenesis" evidence=IEA] [GO:0001106 "RNA polymerase II
            transcription corepressor activity" evidence=IEA] [GO:0001077 "RNA
            polymerase II core promoter proximal region sequence-specific DNA
            binding transcription factor activity involved in positive
            regulation of transcription" evidence=IEA] [GO:0000983 "RNA
            polymerase II core promoter sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0000979 "RNA
            polymerase II core promoter sequence-specific DNA binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0005634
            GO:GO:0005737 GO:GO:0007219 GO:GO:0001077 GO:GO:0071773
            GO:GO:0045666 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0032835
            GO:GO:0000979 GO:GO:0001106 GO:GO:0000983 GO:GO:0072014
            InterPro:IPR018352 SMART:SM00511 GO:GO:0060766
            GeneTree:ENSGT00700000104130 GO:GO:0003198 GO:GO:2000824 KO:K09091
            GO:GO:0035939 RefSeq:NP_001019736.2 UniGene:Bt.34222 GeneID:538609
            KEGG:bta:538609 CTD:26508 OMA:HSWVSEI NextBio:20877472
            EMBL:DAAA02009142 Ensembl:ENSBTAT00000011453 Uniprot:G3X6Q3
        Length = 329

 Score = 134 (52.2 bits), Expect = 5.2e-06, P = 5.2e-06
 Identities = 45/137 (32%), Positives = 70/137 (51%)

Query:   229 KPRSTVKKDTHSP-PLKRSLNKTLVVMSSPPLVASSNSIPPALKRANKPLMEKRRRARIN 287
             +PR     D+ S  P+       L  M+ P    S + +    KR  + ++EKRRR RIN
Sbjct:     4 RPREPSGSDSESDGPIDVGREGELSQMARPLSTPSPSQMQARKKR--RGIIEKRRRDRIN 61

Query:   288 QSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQR-----------QKILSSDIRS 336
              SL+ L+ L+  + + + +  SKLEKA++L++TV HL+             + L+ D RS
Sbjct:    62 SSLSELRRLVPTAFEKQGS--SKLEKAEVLQMTVDHLKMLHATGGTGFFDARALAVDFRS 119

Query:   337 KYKAGYEECSREVSRFL 353
                 G+ EC  EV R+L
Sbjct:   120 ---IGFRECLTEVIRYL 133


>MGI|MGI:104877 [details] [associations]
            symbol:Hes3 "hairy and enhancer of split 3 (Drosophila)"
            species:10090 "Mus musculus" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IGI]
            [GO:0001701 "in utero embryonic development" evidence=IGI]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0008134 "transcription factor
            binding" evidence=NAS] [GO:0021555 "midbrain-hindbrain boundary
            morphogenesis" evidence=IGI] [GO:0021557 "oculomotor nerve
            development" evidence=IGI] [GO:0021558 "trochlear nerve
            development" evidence=IGI] [GO:0021575 "hindbrain morphogenesis"
            evidence=IGI] [GO:0021915 "neural tube development" evidence=IGI]
            [GO:0030901 "midbrain development" evidence=IGI] [GO:0045892
            "negative regulation of transcription, DNA-dependent" evidence=ISO]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IGI] [GO:0046983 "protein
            dimerization activity" evidence=IEA] [GO:0050767 "regulation of
            neurogenesis" evidence=IGI] [GO:0060164 "regulation of timing of
            neuron differentiation" evidence=IGI] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 PROSITE:PS51054
            SMART:SM00353 MGI:MGI:104877 GO:GO:0005634 GO:GO:0003677
            GO:GO:0001701 GO:GO:0045944 GO:GO:0006351 GO:GO:0000122
            GO:GO:0030901 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0008134
            GO:GO:0021575 GeneTree:ENSGT00700000104130 GO:GO:0021555
            HOGENOM:HOG000236346 GO:GO:0021557 GO:GO:0060164 GO:GO:0021558
            CTD:390992 eggNOG:NOG272757 HOVERGEN:HBG005959 KO:K09088
            OMA:QGLWPVP EMBL:D32200 EMBL:D85169 EMBL:AK090218 EMBL:BC116444
            IPI:IPI00751973 RefSeq:NP_032263.2 UniGene:Mm.3516
            ProteinModelPortal:Q61657 SMR:Q61657 STRING:Q61657 PRIDE:Q61657
            Ensembl:ENSMUST00000094438 GeneID:15207 KEGG:mmu:15207
            UCSC:uc008wac.1 InParanoid:Q61657 NextBio:287765 Bgee:Q61657
            CleanEx:MM_HES3 Genevestigator:Q61657 GermOnline:ENSMUSG00000028946
            Uniprot:Q61657
        Length = 175

 Score = 117 (46.2 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
 Identities = 37/90 (41%), Positives = 53/90 (58%)

Query:   278 MEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQR-QKILSS--DI 334
             MEK+RRARIN SL  L++L L+   +   +  KLEKADILEL+V++++  Q  L     +
Sbjct:     1 MEKKRRARINVSLEQLRSL-LERHYSHQIRKRKLEKADILELSVKYMRSLQNSLQGLWPV 59

Query:   335 RS--KYKAGYEECSREVSRFLETPELHLGL 362
              S   Y +G++   R VS+ L   E   GL
Sbjct:    60 PSGVDYPSGFQGGLRGVSQRLRPGEGDSGL 89

 Score = 39 (18.8 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
 Identities = 9/26 (34%), Positives = 12/26 (46%)

Query:   555 SPPPLSNLDQPLDFSIKRDDSMWRPW 580
             +P P SN       S +    +WRPW
Sbjct:   153 APHPASNCQAE---STRPGFRVWRPW 175


>MGI|MGI:1341800 [details] [associations]
            symbol:Hey1 "hairy/enhancer-of-split related with YRPW motif
            1" species:10090 "Mus musculus" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter"
            evidence=ISO;IMP;IDA] [GO:0000983 "RNA polymerase II core promoter
            sequence-specific DNA binding transcription factor activity"
            evidence=IDA] [GO:0000988 "protein binding transcription factor
            activity" evidence=ISO;IDA] [GO:0001078 "RNA polymerase II core
            promoter proximal region sequence-specific DNA binding
            transcription factor activity involved in negative regulation of
            transcription" evidence=IDA] [GO:0001568 "blood vessel development"
            evidence=IGI] [GO:0001570 "vasculogenesis" evidence=IGI]
            [GO:0002076 "osteoblast development" evidence=IGI] [GO:0003151
            "outflow tract morphogenesis" evidence=IGI] [GO:0003181
            "atrioventricular valve morphogenesis" evidence=IGI] [GO:0003184
            "pulmonary valve morphogenesis" evidence=IGI] [GO:0003190
            "atrioventricular valve formation" evidence=IMP] [GO:0003198
            "epithelial to mesenchymal transition involved in endocardial
            cushion formation" evidence=IGI] [GO:0003199 "endocardial cushion
            to mesenchymal transition involved in heart valve formation"
            evidence=IGI] [GO:0003203 "endocardial cushion morphogenesis"
            evidence=IGI] [GO:0003208 "cardiac ventricle morphogenesis"
            evidence=IMP] [GO:0003222 "ventricular trabecula myocardium
            morphogenesis" evidence=IGI] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISO;ISS] [GO:0005515
            "protein binding" evidence=IPI] [GO:0005634 "nucleus"
            evidence=ISO;ISS;IDA] [GO:0005737 "cytoplasm" evidence=IDA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=ISS] [GO:0007219 "Notch signaling pathway"
            evidence=ISO;IDA;TAS] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0009948 "anterior/posterior axis
            specification" evidence=IGI] [GO:0010629 "negative regulation of
            gene expression" evidence=IMP;IDA] [GO:0014031 "mesenchymal cell
            development" evidence=IGI] [GO:0035912 "dorsal aorta morphogenesis"
            evidence=IGI] [GO:0035939 "microsatellite binding"
            evidence=ISO;IDA] [GO:0036304 "umbilical cord morphogenesis"
            evidence=IGI] [GO:0043565 "sequence-specific DNA binding"
            evidence=IDA] [GO:0045665 "negative regulation of neuron
            differentiation" evidence=IMP] [GO:0045669 "positive regulation of
            osteoblast differentiation" evidence=IGI] [GO:0045746 "negative
            regulation of Notch signaling pathway" evidence=ISO] [GO:0045892
            "negative regulation of transcription, DNA-dependent"
            evidence=ISO;IMP] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IGI;IMP] [GO:0046983
            "protein dimerization activity" evidence=IEA] [GO:0060317 "cardiac
            epithelial to mesenchymal transition" evidence=IGI] [GO:0060411
            "cardiac septum morphogenesis" evidence=IMP] [GO:0060412
            "ventricular septum morphogenesis" evidence=IGI] [GO:0060716
            "labyrinthine layer blood vessel development" evidence=IGI]
            [GO:0060840 "artery development" evidence=IGI] [GO:0060842
            "arterial endothelial cell differentiation" evidence=IGI]
            [GO:0061314 "Notch signaling involved in heart development"
            evidence=IC] [GO:2000678 "negative regulation of transcription
            regulatory region DNA binding" evidence=ISO] [GO:2000820 "negative
            regulation of transcription from RNA polymerase II promoter
            involved in smooth muscle cell differentiation" evidence=ISO]
            [GO:2001212 "regulation of vasculogenesis" evidence=IGI]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 MGI:MGI:1341800
            GO:GO:0005737 GO:GO:0005654 GO:GO:0001078 GO:GO:0045944
            GO:GO:0045665 Reactome:REACT_115202 GO:GO:0002076 GO:GO:0045669
            GO:GO:0001570 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0060716
            GO:GO:0009948 GO:GO:0003151 GO:GO:0000983 InterPro:IPR018352
            SMART:SM00511 GO:GO:0060675 GO:GO:0060412 GO:GO:0000988
            GO:GO:0061314 GO:GO:0035912 GO:GO:0003222 GO:GO:0003199
            GO:GO:0003198 GO:GO:0003190 GO:GO:0072049 GO:GO:0072050
            eggNOG:NOG241271 HOGENOM:HOG000286035 HOVERGEN:HBG003275
            OrthoDB:EOG4GB77H GO:GO:0035939 GO:GO:0060842 GO:GO:0003184
            GO:GO:2001212 GO:GO:0036304 EMBL:AF151521 IPI:IPI00125503
            UniGene:Mm.29581 ProteinModelPortal:Q9WV93 SMR:Q9WV93 IntAct:Q9WV93
            STRING:Q9WV93 PhosphoSite:Q9WV93 PRIDE:Q9WV93 InParanoid:Q9WV93
            CleanEx:MM_HEY1 Genevestigator:Q9WV93 GermOnline:ENSMUSG00000040289
            GO:GO:0072087 Uniprot:Q9WV93
        Length = 299

 Score = 132 (51.5 bits), Expect = 7.0e-06, P = 7.0e-06
 Identities = 47/146 (32%), Positives = 77/146 (52%)

Query:   220 PDSSTGCQTKPRSTVKKDTHSPPLKRSLNKTLVVMSSPPLVASSNSIPPALKRANKPLME 279
             PD S+   ++   T++ +  S     +L+  L  MS  P   SS  +  A KR  + ++E
Sbjct:     6 PDYSSS-DSELDETIEVEKESADENGNLSSALCSMS--P-TTSSQVL--ARKR-RRGIIE 58

Query:   280 KRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQRQKILSSD------ 333
             KRRR RIN SL+ L+ L+  + + + +  +KLEKA+IL++TV HL+              
Sbjct:    59 KRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTVDHLKMLHTAGGKGYFDAH 116

Query:   334 -IRSKYKA-GYEECSREVSRFLETPE 357
              +   Y++ G+ EC  EV+R+L   E
Sbjct:   117 ALAMDYRSLGFRECLAEVARYLSIIE 142


>UNIPROTKB|Q66KK8 [details] [associations]
            symbol:hey1 "Hairy/enhancer-of-split related with YRPW
            motif protein 1" species:8364 "Xenopus (Silurana) tropicalis"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=ISS] [GO:0005634 "nucleus"
            evidence=ISS] [GO:0007219 "Notch signaling pathway" evidence=ISS]
            [GO:0033504 "floor plate development" evidence=ISS] [GO:0042803
            "protein homodimerization activity" evidence=ISS] [GO:0043565
            "sequence-specific DNA binding" evidence=ISS] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0046982 "protein heterodimerization activity" evidence=ISS]
            [GO:0048793 "pronephros development" evidence=ISS] [GO:0072013
            "glomus development" evidence=ISS] [GO:0072082 "specification of
            proximal tubule identity" evidence=ISS] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 GO:GO:0005634 GO:GO:0042803
            GO:GO:0043565 GO:GO:0007219 GO:GO:0006351 GO:GO:0000122
            GO:GO:0046982 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR018352
            SMART:SM00511 GO:GO:0033504 CTD:23462 eggNOG:NOG241271
            HOGENOM:HOG000286035 HOVERGEN:HBG003275 KO:K09091 OrthoDB:EOG4GB77H
            GO:GO:0072013 GO:GO:0072082 EMBL:CR760684 EMBL:BC080349
            RefSeq:NP_001007911.1 UniGene:Str.11458 ProteinModelPortal:Q66KK8
            SMR:Q66KK8 STRING:Q66KK8 GeneID:493293 KEGG:xtr:493293
            Xenbase:XB-GENE-486694 InParanoid:Q66KK8 Bgee:Q66KK8 Uniprot:Q66KK8
        Length = 300

 Score = 127 (49.8 bits), Expect = 7.9e-06, Sum P(2) = 7.9e-06
 Identities = 37/122 (30%), Positives = 66/122 (54%)

Query:   244 KRSLNKTLVVMSSPPLVASSNSIPPALKRANKPLMEKRRRARINQSLALLKALILDSAKT 303
             K S ++   + S+   ++ S S     ++  + ++EKRRR RIN SL+ L+ L+  + + 
Sbjct:    22 KESADENGNLSSAAGSMSPSTSSQILARKRRRGIIEKRRRDRINNSLSELRRLVPSAFEK 81

Query:   304 ENTKHSKLEKADILELTVRHLQRQKILSSD-------IRSKYKA-GYEECSREVSRFLET 355
             + +  +KLEKA+IL++TV HL+               +   Y++ G+ EC  EV+R+L  
Sbjct:    82 QGS--AKLEKAEILQMTVDHLKMLHTAGGKGYFDAHALAMDYRSLGFRECLAEVARYLSI 139

Query:   356 PE 357
              E
Sbjct:   140 IE 141

 Score = 44 (20.5 bits), Expect = 7.9e-06, Sum P(2) = 7.9e-06
 Identities = 11/34 (32%), Positives = 16/34 (47%)

Query:   528 PDGQVVFILPNYMAPSTSPPCKDDLKS-SPPPLS 560
             P+G +  +LP   +   SPP    + S S  P S
Sbjct:   233 PNGNIASVLPVVASSKLSPPLLSSMASLSAFPFS 266


>ZFIN|ZDB-GENE-060815-1 [details] [associations]
            symbol:her4.2 "hairy-related 4.2" species:7955 "Danio
            rerio" [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0048936 "peripheral nervous system neuron
            axonogenesis" evidence=IGI] InterPro:IPR003650 InterPro:IPR011598
            Pfam:PF00010 PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353
            ZFIN:ZDB-GENE-060815-1 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR018352
            SMART:SM00511 HOVERGEN:HBG005960 GO:GO:0048936 UniGene:Dr.106526
            UniGene:Dr.121752 UniGene:Dr.32742 EMBL:BC049296 EMBL:BC159219
            IPI:IPI00955322 InParanoid:Q7ZUF1 Uniprot:Q7ZUF1
        Length = 152

 Score = 112 (44.5 bits), Expect = 8.4e-06, P = 8.4e-06
 Identities = 35/99 (35%), Positives = 49/99 (49%)

Query:   256 SPPLVASSNSIPPAL-KRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKA 314
             +P +  S +S    L  +  KP++EK RR RIN S+  LK L+      +    S+ EKA
Sbjct:     2 APTITGSISSRETLLTNKLRKPMVEKIRRERINSSIEKLKTLLAQEF-VKQQPDSRQEKA 60

Query:   315 DILELTVRHLQRQKILSSDIRSKYKAGYEECSREVSRFL 353
             DILE+T+  L+R     S   S    G   C +E   FL
Sbjct:    61 DILEMTLDFLRR-----SQKSSAAGDGRSRCVQEAVSFL 94


>ZFIN|ZDB-GENE-081031-104 [details] [associations]
            symbol:her4.4 "hairy-related 4.4" species:7955
            "Danio rerio" [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0048936 "peripheral nervous system neuron axonogenesis"
            evidence=IGI] InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353
            ZFIN:ZDB-GENE-081031-104 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR018352
            SMART:SM00511 GeneTree:ENSGT00700000104168 HOGENOM:HOG000236346
            HOVERGEN:HBG005960 OrthoDB:EOG495ZT5 EMBL:CU062502 IPI:IPI00866511
            RefSeq:NP_001121862.1 UniGene:Dr.32742 Ensembl:ENSDART00000079265
            GeneID:100149066 KEGG:dre:100149066 OMA:RHENSTS NextBio:20792691
            Uniprot:B0V3D3
        Length = 152

 Score = 112 (44.5 bits), Expect = 8.4e-06, P = 8.4e-06
 Identities = 35/99 (35%), Positives = 49/99 (49%)

Query:   256 SPPLVASSNSIPPAL-KRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKA 314
             +P +  S +S    L  +  KP++EK RR RIN S+  LK L+      +    S+ EKA
Sbjct:     2 TPTITGSISSRETLLTNKLRKPMVEKIRRERINSSIEKLKTLLAQEF-VKQQPDSRQEKA 60

Query:   315 DILELTVRHLQRQKILSSDIRSKYKAGYEECSREVSRFL 353
             DILE+T+  L+R     S   S    G   C +E   FL
Sbjct:    61 DILEMTLDFLRR-----SQKSSAAGDGRSRCVQEAVSFL 94


>UNIPROTKB|F5H3V9 [details] [associations]
            symbol:HEYL "Hairy/enhancer-of-split-related with YRPW
            motif-like protein" species:9606 "Homo sapiens" [GO:0005634
            "nucleus" evidence=IEA] [GO:0000979 "RNA polymerase II core
            promoter sequence-specific DNA binding" evidence=IEA] [GO:0000983
            "RNA polymerase II core promoter sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0001077 "RNA
            polymerase II core promoter proximal region sequence-specific DNA
            binding transcription factor activity involved in positive
            regulation of transcription" evidence=IEA] [GO:0001106 "RNA
            polymerase II transcription corepressor activity" evidence=IEA]
            [GO:0003151 "outflow tract morphogenesis" evidence=IEA] [GO:0003181
            "atrioventricular valve morphogenesis" evidence=IEA] [GO:0003184
            "pulmonary valve morphogenesis" evidence=IEA] [GO:0003198
            "epithelial to mesenchymal transition involved in endocardial
            cushion formation" evidence=IEA] [GO:0003208 "cardiac ventricle
            morphogenesis" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0032835 "glomerulus development" evidence=IEA] [GO:0042803
            "protein homodimerization activity" evidence=IEA] [GO:0045666
            "positive regulation of neuron differentiation" evidence=IEA]
            [GO:0060412 "ventricular septum morphogenesis" evidence=IEA]
            [GO:0071773 "cellular response to BMP stimulus" evidence=IEA]
            [GO:0072014 "proximal tubule development" evidence=IEA]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0005634
            GO:GO:0005737 EMBL:AL035404 GO:GO:0001077 GO:GO:0071773
            GO:GO:0045666 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0032835
            GO:GO:0000979 GO:GO:0001106 GO:GO:0000983 GO:GO:0072014
            InterPro:IPR018352 SMART:SM00511 GO:GO:0003198 HGNC:HGNC:4882
            ChiTaRS:HEYL IPI:IPI01010022 ProteinModelPortal:F5H3V9 SMR:F5H3V9
            Ensembl:ENST00000535435 ArrayExpress:F5H3V9 Bgee:F5H3V9
            Uniprot:F5H3V9
        Length = 300

 Score = 131 (51.2 bits), Expect = 9.1e-06, P = 9.1e-06
 Identities = 40/107 (37%), Positives = 62/107 (57%)

Query:   258 PLVASSNSIPPALKRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADIL 317
             PL   S+S   A K+ ++ ++EKRRR RIN SL+ L+ L+  + + + +  SKLEKA++L
Sbjct:     4 PLSTPSSSQMQARKK-HRGIIEKRRRDRINSSLSELRRLVPTAFEKQGS--SKLEKAEVL 60

Query:   318 ELTVRHLQR-----------QKILSSDIRSKYKAGYEECSREVSRFL 353
             ++TV HL+             + L+ D RS    G+ EC  EV R+L
Sbjct:    61 QMTVDHLKMLHATGGTGFFDARALAVDFRS---IGFRECLTEVIRYL 104


>UNIPROTKB|Q9TSZ2 [details] [associations]
            symbol:HEY1 "Hairy/enhancer-of-split related with YRPW
            motif protein 1" species:9615 "Canis lupus familiaris" [GO:0003198
            "epithelial to mesenchymal transition involved in endocardial
            cushion formation" evidence=ISS] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
            "protein dimerization activity" evidence=IEA] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 GO:GO:0005634 GO:GO:0006355
            GO:GO:0003677 GO:GO:0007219 GO:GO:0006351 Gene3D:4.10.280.10
            SUPFAM:SSF47459 InterPro:IPR018352 SMART:SM00511 GO:GO:0003198
            CTD:23462 eggNOG:NOG241271 HOGENOM:HOG000286035 HOVERGEN:HBG003275
            KO:K09091 OrthoDB:EOG4GB77H EMBL:AJ388551 RefSeq:NP_001002953.1
            UniGene:Cfa.121 ProteinModelPortal:Q9TSZ2 SMR:Q9TSZ2 STRING:Q9TSZ2
            GeneID:403420 KEGG:cfa:403420 InParanoid:Q9TSZ2 NextBio:20816940
            Uniprot:Q9TSZ2
        Length = 304

 Score = 131 (51.2 bits), Expect = 9.4e-06, P = 9.4e-06
 Identities = 48/146 (32%), Positives = 77/146 (52%)

Query:   220 PDSSTGCQTKPRSTVKKDTHSPPLKRSLNKTLVVMSSPPLVASSNSIPPALKRANKPLME 279
             PD S+   ++   TV+ +  S     +L+  L  MS  P   SS  +  A KR  + ++E
Sbjct:     6 PDYSSS-DSELDETVEVEKESADENGNLSSALGSMS--P-TTSSQIL--ARKR-RRGIIE 58

Query:   280 KRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQRQKILSSD------ 333
             KRRR RIN SL+ L+ L+  + + + +  +KLEKA+IL++TV HL+              
Sbjct:    59 KRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTVDHLKMLHTAGGKGYFDAH 116

Query:   334 -IRSKYKA-GYEECSREVSRFLETPE 357
              +   Y++ G+ EC  EV+R+L   E
Sbjct:   117 ALAMDYRSLGFRECLAEVARYLSIIE 142


>UNIPROTKB|E5RHK6 [details] [associations]
            symbol:HEY1 "Hairy/enhancer-of-split-related with YRPW
            motif protein 1" species:9606 "Homo sapiens" [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0046983 "protein dimerization activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0005634
            GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 Gene3D:4.10.280.10
            SUPFAM:SSF47459 InterPro:IPR018352 SMART:SM00511 EMBL:AC016240
            HGNC:HGNC:4880 ChiTaRS:HEY1 IPI:IPI00979760
            ProteinModelPortal:E5RHK6 SMR:E5RHK6 Ensembl:ENST00000518733
            ArrayExpress:E5RHK6 Bgee:E5RHK6 Uniprot:E5RHK6
        Length = 186

 Score = 123 (48.4 bits), Expect = 1.0e-05, P = 1.0e-05
 Identities = 32/95 (33%), Positives = 55/95 (57%)

Query:   271 KRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQRQKIL 330
             ++  + ++EKRRR RIN SL+ L+ L+  + + + +  +KLEKA+IL++TV HL+     
Sbjct:    12 RKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTVDHLKMLHTA 69

Query:   331 SSD-------IRSKYKA-GYEECSREVSRFLETPE 357
                       +   Y++ G+ EC  EV+R+L   E
Sbjct:    70 GGKGYFDAHALAMDYRSLGFRECLAEVARYLSIIE 104


>ZFIN|ZDB-GENE-040824-4 [details] [associations]
            symbol:her11 "hairy-related 11" species:7955 "Danio
            rerio" [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0030917 "midbrain-hindbrain boundary development" evidence=IMP]
            [GO:0046982 "protein heterodimerization activity" evidence=IPI]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0050768 "negative
            regulation of neurogenesis" evidence=IMP] InterPro:IPR011598
            Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 ZFIN:ZDB-GENE-040824-4
            Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0050768 HSSP:P61244
            GO:GO:0030917 GeneTree:ENSGT00700000104130 EMBL:FP015860
            EMBL:BC162348 EMBL:BC162354 EMBL:AY312568 IPI:IPI00502542
            RefSeq:NP_001003886.1 UniGene:Dr.84178 STRING:Q6W4T8
            Ensembl:ENSDART00000026907 GeneID:445409 KEGG:dre:445409 CTD:445409
            HOVERGEN:HBG097489 InParanoid:Q6W4T8 NextBio:20832113
            Uniprot:Q6W4T8
        Length = 274

 Score = 119 (46.9 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
 Identities = 27/87 (31%), Positives = 52/87 (59%)

Query:   270 LKRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQRQKI 329
             +KR  KP++EK+RR RIN +L  L+ L+  +      ++ KLEKA+IL+L V+++++   
Sbjct:    15 IKRRLKPVIEKKRRDRINHNLDALRDLLFKNTADTRLQNPKLEKAEILDLAVQYIKKTIR 74

Query:   330 LSSDIRSKYKAGYEECSREVSRFLETP 356
              +   R+  +    +C    ++F+ +P
Sbjct:    75 KTETARNSNQM---DCKSTQNQFVISP 98

 Score = 50 (22.7 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
 Identities = 14/33 (42%), Positives = 19/33 (57%)

Query:   541 APSTSPPCKD-DLKSSPPPLSNLDQPLDFSIKR 572
             +PS+SPPC      + P  LS L  PL  S++R
Sbjct:   201 SPSSSPPCPSTSCAAFPDQLSPLITPL--SLQR 231

 Score = 40 (19.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
 Identities = 12/44 (27%), Positives = 18/44 (40%)

Query:   537 PNYMAPSTSPPCKDDLKSSPPPLSNLDQPLDFSIKRDDSMWRPW 580
             P ++  +  P    DL     P+  L Q   F +    + WRPW
Sbjct:   232 PVFVPQAILPHMTRDLTPPHSPVLALRQD-PFPLPNQHA-WRPW 273


>ZFIN|ZDB-GENE-081030-7 [details] [associations]
            symbol:her4.3 "hairy-related 4.3" species:7955 "Danio
            rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0048936 "peripheral nervous system neuron axonogenesis"
            evidence=IGI] InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353
            ZFIN:ZDB-GENE-081030-7 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR018352
            SMART:SM00511 GeneTree:ENSGT00700000104168 HOGENOM:HOG000236346
            HOVERGEN:HBG005960 GO:GO:0048936 EMBL:CU062502 IPI:IPI00858755
            RefSeq:NP_001154880.1 UniGene:Dr.106526 UniGene:Dr.121752
            Ensembl:ENSDART00000104209 GeneID:792198 KEGG:dre:792198 CTD:792198
            eggNOG:NOG313575 NextBio:20930951 Uniprot:B0V3D2
        Length = 152

 Score = 111 (44.1 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 35/99 (35%), Positives = 49/99 (49%)

Query:   256 SPPLVASSNSIPPAL-KRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKA 314
             +P +  S +S    L  +  KP++EK RR RIN S+  LK L+      +    S+ EKA
Sbjct:     2 TPTITGSISSRETLLTNKLRKPMVEKIRRERINSSIEKLKTLLAQEF-IKQQPDSRQEKA 60

Query:   315 DILELTVRHLQRQKILSSDIRSKYKAGYEECSREVSRFL 353
             DILE+T+  L+R     S   S    G   C +E   FL
Sbjct:    61 DILEMTLDFLRR-----SQKSSAAGDGRSRCVQEAVSFL 94


>ZFIN|ZDB-GENE-980526-521 [details] [associations]
            symbol:her4.1 "hairy-related 4.1" species:7955
            "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=IGI] [GO:0007219 "Notch signaling pathway" evidence=IMP]
            [GO:0001757 "somite specification" evidence=IMP] [GO:0005634
            "nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0003690 "double-stranded DNA binding"
            evidence=IDA] [GO:0048936 "peripheral nervous system neuron
            axonogenesis" evidence=IGI] InterPro:IPR003650 InterPro:IPR011598
            Pfam:PF00010 PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353
            ZFIN:ZDB-GENE-980526-521 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR018352
            SMART:SM00511 GeneTree:ENSGT00700000104168 HOVERGEN:HBG005960
            EMBL:CU062502 UniGene:Dr.32742 EMBL:BC152180 EMBL:X97332
            IPI:IPI00836849 RefSeq:NP_001096598.1 Ensembl:ENSDART00000079274
            GeneID:100149863 KEGG:dre:100149863 InParanoid:Q90466 OMA:TDYQRIR
            NextBio:20793484 Uniprot:Q90466
        Length = 152

 Score = 111 (44.1 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 35/99 (35%), Positives = 49/99 (49%)

Query:   256 SPPLVASSNSIPPAL-KRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKA 314
             +P +  S +S    L  +  KP++EK RR RIN S+  LK L+      +    S+ EKA
Sbjct:     2 TPTITGSISSRETLLTNKLRKPMVEKIRRERINSSIEKLKTLLAQEF-IKQQPDSRQEKA 60

Query:   315 DILELTVRHLQRQKILSSDIRSKYKAGYEECSREVSRFL 353
             DILE+T+  L+R     S   S    G   C +E   FL
Sbjct:    61 DILEMTLDFLRR-----SQKSSAAGDGRSRCVQEAVSFL 94


>UNIPROTKB|Q9NQ87 [details] [associations]
            symbol:HEYL "Hairy/enhancer-of-split related with YRPW
            motif-like protein" species:9606 "Homo sapiens" [GO:0000979 "RNA
            polymerase II core promoter sequence-specific DNA binding"
            evidence=IEA] [GO:0001077 "RNA polymerase II core promoter proximal
            region sequence-specific DNA binding transcription factor activity
            involved in positive regulation of transcription" evidence=IEA]
            [GO:0001106 "RNA polymerase II transcription corepressor activity"
            evidence=IEA] [GO:0032835 "glomerulus development" evidence=IEA]
            [GO:0042803 "protein homodimerization activity" evidence=IEA]
            [GO:0071773 "cellular response to BMP stimulus" evidence=IEA]
            [GO:0072014 "proximal tubule development" evidence=IEA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IDA] [GO:0000988 "protein binding transcription
            factor activity" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=ISS] [GO:0007219 "Notch signaling pathway"
            evidence=IDA;TAS] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=IDA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0003198 "epithelial to mesenchymal transition involved in
            endocardial cushion formation" evidence=ISS] [GO:0005634 "nucleus"
            evidence=IDA] [GO:2000824 "negative regulation of androgen receptor
            activity" evidence=IDA] [GO:0003714 "transcription corepressor
            activity" evidence=IDA] [GO:0050683 "AF-1 domain binding"
            evidence=IPI] [GO:0046982 "protein heterodimerization activity"
            evidence=IDA] [GO:0060766 "negative regulation of androgen receptor
            signaling pathway" evidence=IDA] [GO:0035939 "microsatellite
            binding" evidence=IDA] [GO:0008134 "transcription factor binding"
            evidence=NAS] [GO:0000983 "RNA polymerase II core promoter
            sequence-specific DNA binding transcription factor activity"
            evidence=ISS] [GO:0045666 "positive regulation of neuron
            differentiation" evidence=ISS] [GO:0003151 "outflow tract
            morphogenesis" evidence=ISS] [GO:0003181 "atrioventricular valve
            morphogenesis" evidence=ISS] [GO:0003184 "pulmonary valve
            morphogenesis" evidence=ISS] [GO:0003203 "endocardial cushion
            morphogenesis" evidence=ISS] [GO:0003208 "cardiac ventricle
            morphogenesis" evidence=ISS] [GO:0014031 "mesenchymal cell
            development" evidence=ISS] [GO:0060317 "cardiac epithelial to
            mesenchymal transition" evidence=ISS] [GO:0060412 "ventricular
            septum morphogenesis" evidence=ISS] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 GO:GO:0005634 GO:GO:0005737
            Reactome:REACT_111102 GO:GO:0003714 GO:GO:0045892 EMBL:AL035404
            GO:GO:0045944 GO:GO:0007219 GO:GO:0001077 GO:GO:0071773
            GO:GO:0046982 GO:GO:0045666 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GO:GO:0008134 GO:GO:0032835 GO:GO:0000979 GO:GO:0001106
            GO:GO:0003151 GO:GO:0000983 GO:GO:0072014 InterPro:IPR018352
            SMART:SM00511 GO:GO:0003181 GO:GO:0060412 GO:GO:0060766
            GO:GO:0003198 GO:GO:2000824 HOGENOM:HOG000286035 HOVERGEN:HBG003275
            KO:K09091 GO:GO:0035939 GO:GO:0003208 GO:GO:0003184 CTD:26508
            eggNOG:NOG310123 OMA:HSWVSEI OrthoDB:EOG4P8FJZ EMBL:AJ272215
            EMBL:AF311885 EMBL:BC006087 IPI:IPI00005137 RefSeq:NP_055386.1
            UniGene:Hs.472566 ProteinModelPortal:Q9NQ87 SMR:Q9NQ87
            IntAct:Q9NQ87 MINT:MINT-1190764 STRING:Q9NQ87 PhosphoSite:Q9NQ87
            DMDM:146286205 PRIDE:Q9NQ87 DNASU:26508 Ensembl:ENST00000372852
            GeneID:26508 KEGG:hsa:26508 UCSC:uc001cdp.3 GeneCards:GC01M040119
            HGNC:HGNC:4882 HPA:HPA001438 MIM:609034 neXtProt:NX_Q9NQ87
            PharmGKB:PA29260 InParanoid:Q9NQ87 PhylomeDB:Q9NQ87 ChiTaRS:HEYL
            GenomeRNAi:26508 NextBio:48798 ArrayExpress:Q9NQ87 Bgee:Q9NQ87
            CleanEx:HS_HEYL Genevestigator:Q9NQ87 Uniprot:Q9NQ87
        Length = 328

 Score = 131 (51.2 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 40/107 (37%), Positives = 62/107 (57%)

Query:   258 PLVASSNSIPPALKRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADIL 317
             PL   S+S   A K+ ++ ++EKRRR RIN SL+ L+ L+  + + + +  SKLEKA++L
Sbjct:    32 PLSTPSSSQMQARKK-HRGIIEKRRRDRINSSLSELRRLVPTAFEKQGS--SKLEKAEVL 88

Query:   318 ELTVRHLQR-----------QKILSSDIRSKYKAGYEECSREVSRFL 353
             ++TV HL+             + L+ D RS    G+ EC  EV R+L
Sbjct:    89 QMTVDHLKMLHATGGTGFFDARALAVDFRS---IGFRECLTEVIRYL 132


>UNIPROTKB|E1BEV8 [details] [associations]
            symbol:HEY2 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:2001212 "regulation of vasculogenesis" evidence=IEA]
            [GO:2000820 "negative regulation of transcription from RNA
            polymerase II promoter involved in smooth muscle cell
            differentiation" evidence=IEA] [GO:2000678 "negative regulation of
            transcription regulatory region DNA binding" evidence=IEA]
            [GO:0090102 "cochlea development" evidence=IEA] [GO:0065004
            "protein-DNA complex assembly" evidence=IEA] [GO:0061156 "pulmonary
            artery morphogenesis" evidence=IEA] [GO:0060977 "coronary
            vasculature morphogenesis" evidence=IEA] [GO:0060948 "cardiac
            vascular smooth muscle cell development" evidence=IEA] [GO:0060842
            "arterial endothelial cell differentiation" evidence=IEA]
            [GO:0060716 "labyrinthine layer blood vessel development"
            evidence=IEA] [GO:0060633 "negative regulation of transcription
            initiation from RNA polymerase II promoter" evidence=IEA]
            [GO:0060413 "atrial septum morphogenesis" evidence=IEA] [GO:0060347
            "heart trabecula formation" evidence=IEA] [GO:0060045 "positive
            regulation of cardiac muscle cell proliferation" evidence=IEA]
            [GO:0055015 "ventricular cardiac muscle cell development"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0045746
            "negative regulation of Notch signaling pathway" evidence=IEA]
            [GO:0045607 "regulation of auditory receptor cell differentiation"
            evidence=IEA] [GO:0045165 "cell fate commitment" evidence=IEA]
            [GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0036304
            "umbilical cord morphogenesis" evidence=IEA] [GO:0035939
            "microsatellite binding" evidence=IEA] [GO:0035912 "dorsal aorta
            morphogenesis" evidence=IEA] [GO:0035910 "ascending aorta
            morphogenesis" evidence=IEA] [GO:0017053 "transcriptional repressor
            complex" evidence=IEA] [GO:0016580 "Sin3 complex" evidence=IEA]
            [GO:0014898 "cardiac muscle hypertrophy in response to stress"
            evidence=IEA] [GO:0010667 "negative regulation of cardiac muscle
            cell apoptotic process" evidence=IEA] [GO:0010460 "positive
            regulation of heart rate" evidence=IEA] [GO:0009948
            "anterior/posterior axis specification" evidence=IEA] [GO:0007219
            "Notch signaling pathway" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0003222 "ventricular trabecula myocardium
            morphogenesis" evidence=IEA] [GO:0003215 "cardiac right ventricle
            morphogenesis" evidence=IEA] [GO:0003214 "cardiac left ventricle
            morphogenesis" evidence=IEA] [GO:0003199 "endocardial cushion to
            mesenchymal transition involved in heart valve formation"
            evidence=IEA] [GO:0003195 "tricuspid valve formation" evidence=IEA]
            [GO:0003184 "pulmonary valve morphogenesis" evidence=IEA]
            [GO:0003171 "atrioventricular valve development" evidence=IEA]
            [GO:0003151 "outflow tract morphogenesis" evidence=IEA] [GO:0003150
            "muscular septum morphogenesis" evidence=IEA] [GO:0001570
            "vasculogenesis" evidence=IEA] [GO:0001102 "RNA polymerase II
            activating transcription factor binding" evidence=IEA] [GO:0000988
            "protein binding transcription factor activity" evidence=IEA]
            [GO:0000983 "RNA polymerase II core promoter sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0046983
            "protein dimerization activity" evidence=IEA] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 GO:GO:0005737 GO:GO:0017053
            GO:GO:0043565 GO:GO:0007219 GO:GO:0060840 GO:GO:0010460
            GO:GO:0001570 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0014898
            GO:GO:0009948 GO:GO:0000983 GO:GO:0045165 GO:GO:0090102
            GO:GO:0055015 InterPro:IPR018352 SMART:SM00511 GO:GO:0060045
            GO:GO:0045746 GO:GO:0060633 GO:GO:0016580 GO:GO:0003222
            GeneTree:ENSGT00700000104130 GO:GO:0003199 GO:GO:0065004
            GO:GO:0003195 GO:GO:0010667 KO:K09091 GO:GO:2000820 CTD:23493
            OMA:TCASQRE GO:GO:0003171 GO:GO:0060948 GO:GO:0060977 GO:GO:0045607
            EMBL:DAAA02025584 EMBL:DAAA02025585 IPI:IPI00703302
            RefSeq:NP_001178984.1 UniGene:Bt.49817 Ensembl:ENSBTAT00000001214
            GeneID:538619 KEGG:bta:538619 NextBio:20877478 Uniprot:E1BEV8
        Length = 337

 Score = 124 (48.7 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
 Identities = 39/114 (34%), Positives = 62/114 (54%)

Query:   252 VVMSSPPLVASSNSIPPALKRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKL 311
             V+ S+ P   S   I    KR  + ++EKRRR RIN SL+ L+ L+  + + + +  +KL
Sbjct:    34 VIRSNSPTTTSQ--IMARKKR--RGIIEKRRRDRINNSLSELRRLVPTAFEKQGS--AKL 87

Query:   312 EKADILELTVRHLQRQKILSS----DIRSK----YKAGYEECSREVSRFLETPE 357
             EKA+IL++TV HL+  +        D  +        G+ EC  EV+R+L + E
Sbjct:    88 EKAEILQMTVDHLKMLQATGGKGYFDAHALAMDFMSIGFRECLTEVARYLSSVE 141

 Score = 43 (20.2 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
 Identities = 9/22 (40%), Positives = 11/22 (50%)

Query:   537 PNYMAPSTSPPCKDDLKSSPPP 558
             PN +  S S PC+    S  PP
Sbjct:   199 PNGLHASESTPCRLSTTSEVPP 220

 Score = 39 (18.8 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
 Identities = 9/21 (42%), Positives = 13/21 (61%)

Query:   403 IDSG--VRQRLFRHLENCMSE 421
             +DS   +R RL  HL +C S+
Sbjct:   143 LDSSDPLRVRLVSHLSSCASQ 163


>UNIPROTKB|Q9I8A3 [details] [associations]
            symbol:hey1 "Hairy/enhancer-of-split related with YRPW
            motif protein 1" species:8355 "Xenopus laevis" [GO:0000122
            "negative regulation of transcription from RNA polymerase II
            promoter" evidence=IMP;IDA] [GO:0003677 "DNA binding" evidence=IDA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0007219 "Notch signaling
            pathway" evidence=IMP] [GO:0033504 "floor plate development"
            evidence=IMP] [GO:0042803 "protein homodimerization activity"
            evidence=IPI] [GO:0043425 "bHLH transcription factor binding"
            evidence=IPI] [GO:0043565 "sequence-specific DNA binding"
            evidence=IDA] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=IMP;IDA] [GO:0046982 "protein
            heterodimerization activity" evidence=IPI] [GO:0048793 "pronephros
            development" evidence=IMP] [GO:0072013 "glomus development"
            evidence=IMP] [GO:0072082 "specification of proximal tubule
            identity" evidence=IMP] [GO:0072196 "proximal/distal pattern
            formation involved in pronephric nephron development" evidence=IMP]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0005634
            GO:GO:0043565 GO:GO:0007219 GO:GO:0006351 GO:GO:0000122
            Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR018352 SMART:SM00511
            GO:GO:0033504 GO:GO:0072196 CTD:23462 HOVERGEN:HBG003275 KO:K09091
            EMBL:AJ401271 EMBL:BC084410 RefSeq:NP_001083926.1 UniGene:Xl.469
            ProteinModelPortal:Q9I8A3 SMR:Q9I8A3 GeneID:399195 KEGG:xla:399195
            Xenbase:XB-GENE-865637 GO:GO:0072013 GO:GO:0072082 Uniprot:Q9I8A3
        Length = 294

 Score = 124 (48.7 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
 Identities = 37/104 (35%), Positives = 60/104 (57%)

Query:   262 SSNSIPPALKRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTV 321
             S++S   A KR  + ++EKRRR RIN SL+ L+ L+  + + + +  +KLEKA+IL++TV
Sbjct:    37 STSSQILARKR-RRGIIEKRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTV 93

Query:   322 RHLQRQKILSSD-------IRSKYKA-GYEECSREVSRFLETPE 357
              HL+               +   Y++ G+ EC  EV+R+L   E
Sbjct:    94 DHLKMLHTAGGKGYFDAHALAMDYRSLGFRECLAEVARYLSIIE 137

 Score = 44 (20.5 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
 Identities = 11/34 (32%), Positives = 16/34 (47%)

Query:   528 PDGQVVFILPNYMAPSTSPPCKDDLKS-SPPPLS 560
             P+G +  +LP   +   SPP    + S S  P S
Sbjct:   227 PNGNIASVLPVVASSKLSPPLLSSMASLSAFPFS 260


>UNIPROTKB|Q2KIN4 [details] [associations]
            symbol:HEY1 "Hairy/enhancer-of-split related with YRPW
            motif protein 1" species:9913 "Bos taurus" [GO:0003198 "epithelial
            to mesenchymal transition involved in endocardial cushion
            formation" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
            [GO:2000820 "negative regulation of transcription from RNA
            polymerase II promoter involved in smooth muscle cell
            differentiation" evidence=IEA] [GO:2000678 "negative regulation of
            transcription regulatory region DNA binding" evidence=IEA]
            [GO:0060840 "artery development" evidence=IEA] [GO:0045746
            "negative regulation of Notch signaling pathway" evidence=IEA]
            [GO:0045669 "positive regulation of osteoblast differentiation"
            evidence=IEA] [GO:0035939 "microsatellite binding" evidence=IEA]
            [GO:0009948 "anterior/posterior axis specification" evidence=IEA]
            [GO:0007219 "Notch signaling pathway" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0003222 "ventricular trabecula myocardium
            morphogenesis" evidence=IEA] [GO:0003199 "endocardial cushion to
            mesenchymal transition involved in heart valve formation"
            evidence=IEA] [GO:0002076 "osteoblast development" evidence=IEA]
            [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0001525
            "angiogenesis" evidence=IEA] [GO:0000988 "protein binding
            transcription factor activity" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
            dimerization activity" evidence=IEA] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 GO:GO:0005634 GO:GO:0007219
            GO:GO:0003700 GO:GO:0006351 GO:GO:0001525 GO:GO:0002076
            GO:GO:0060840 GO:GO:0045669 GO:GO:0001570 Gene3D:4.10.280.10
            SUPFAM:SSF47459 GO:GO:0009948 InterPro:IPR018352 SMART:SM00511
            GO:GO:0045746 GO:GO:0000988 GO:GO:0003222
            GeneTree:ENSGT00700000104130 GO:GO:0003199 GO:GO:0003198
            GO:GO:2000678 EMBL:BC112574 IPI:IPI00702797 RefSeq:NP_001001172.2
            UniGene:Bt.59697 ProteinModelPortal:Q2KIN4 SMR:Q2KIN4
            Ensembl:ENSBTAT00000020864 GeneID:408005 KEGG:bta:408005 CTD:23462
            eggNOG:NOG241271 HOGENOM:HOG000286035 HOVERGEN:HBG003275
            InParanoid:Q2KIN4 KO:K09091 OMA:AHPDYSS OrthoDB:EOG4GB77H
            NextBio:20818624 GO:GO:0035939 GO:GO:2000820 Uniprot:Q2KIN4
        Length = 304

 Score = 128 (50.1 bits), Expect = 2.0e-05, P = 2.0e-05
 Identities = 46/146 (31%), Positives = 78/146 (53%)

Query:   220 PDSSTGCQTKPRSTVKKDTHSPPLKRSLNKTLVVMSSPPLVASSNSIPPALKRANKPLME 279
             P+ S+  +++   T++ +  S     +L+  L  MS  P   SS  +  A KR  + ++E
Sbjct:     6 PEYSSS-ESELDETIEVEKESADENGNLSSALGSMS--P-TTSSQIL--ARKR-RRGIIE 58

Query:   280 KRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQRQKILSSD------ 333
             KRRR RIN SL+ L+ L+  + + + +  +KLEKA+IL++TV HL+              
Sbjct:    59 KRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTVDHLKMLHTAGGKGYFDAH 116

Query:   334 -IRSKYKA-GYEECSREVSRFLETPE 357
              +   Y++ G+ EC  EV+R+L   E
Sbjct:   117 ALAMDYRSLGFRECLAEVARYLSIIE 142


>UNIPROTKB|G3V7S6 [details] [associations]
            symbol:Hey2 "Protein Hey2" species:10116 "Rattus
            norvegicus" [GO:0000983 "RNA polymerase II core promoter
            sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0000988 "protein binding transcription factor
            activity" evidence=IEA] [GO:0001102 "RNA polymerase II activating
            transcription factor binding" evidence=IEA] [GO:0001570
            "vasculogenesis" evidence=IEA] [GO:0003150 "muscular septum
            morphogenesis" evidence=IEA] [GO:0003151 "outflow tract
            morphogenesis" evidence=IEA] [GO:0003171 "atrioventricular valve
            development" evidence=IEA] [GO:0003184 "pulmonary valve
            morphogenesis" evidence=IEA] [GO:0003195 "tricuspid valve
            formation" evidence=IEA] [GO:0003199 "endocardial cushion to
            mesenchymal transition involved in heart valve formation"
            evidence=IEA] [GO:0003214 "cardiac left ventricle morphogenesis"
            evidence=IEA] [GO:0003215 "cardiac right ventricle morphogenesis"
            evidence=IEA] [GO:0003222 "ventricular trabecula myocardium
            morphogenesis" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0007219 "Notch signaling pathway" evidence=IEA] [GO:0009948
            "anterior/posterior axis specification" evidence=IEA] [GO:0010460
            "positive regulation of heart rate" evidence=IEA] [GO:0010667
            "negative regulation of cardiac muscle cell apoptotic process"
            evidence=IEA] [GO:0014898 "cardiac muscle hypertrophy in response
            to stress" evidence=IEA] [GO:0016580 "Sin3 complex" evidence=IEA]
            [GO:0017053 "transcriptional repressor complex" evidence=IEA]
            [GO:0035910 "ascending aorta morphogenesis" evidence=IEA]
            [GO:0035912 "dorsal aorta morphogenesis" evidence=IEA] [GO:0035939
            "microsatellite binding" evidence=IEA] [GO:0036304 "umbilical cord
            morphogenesis" evidence=IEA] [GO:0042826 "histone deacetylase
            binding" evidence=IEA] [GO:0045165 "cell fate commitment"
            evidence=IEA] [GO:0045607 "regulation of auditory receptor cell
            differentiation" evidence=IEA] [GO:0045746 "negative regulation of
            Notch signaling pathway" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0046983 "protein dimerization activity"
            evidence=IEA] [GO:0055015 "ventricular cardiac muscle cell
            development" evidence=IEA] [GO:0060045 "positive regulation of
            cardiac muscle cell proliferation" evidence=IEA] [GO:0060347 "heart
            trabecula formation" evidence=IEA] [GO:0060413 "atrial septum
            morphogenesis" evidence=IEA] [GO:0060633 "negative regulation of
            transcription initiation from RNA polymerase II promoter"
            evidence=IEA] [GO:0060716 "labyrinthine layer blood vessel
            development" evidence=IEA] [GO:0060842 "arterial endothelial cell
            differentiation" evidence=IEA] [GO:0060948 "cardiac vascular smooth
            muscle cell development" evidence=IEA] [GO:0060977 "coronary
            vasculature morphogenesis" evidence=IEA] [GO:0061156 "pulmonary
            artery morphogenesis" evidence=IEA] [GO:0065004 "protein-DNA
            complex assembly" evidence=IEA] [GO:0090102 "cochlea development"
            evidence=IEA] [GO:2000678 "negative regulation of transcription
            regulatory region DNA binding" evidence=IEA] [GO:2000820 "negative
            regulation of transcription from RNA polymerase II promoter
            involved in smooth muscle cell differentiation" evidence=IEA]
            [GO:2001212 "regulation of vasculogenesis" evidence=IEA]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 RGD:621405
            GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
            Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR018352 SMART:SM00511
            EMBL:CH474002 GeneTree:ENSGT00700000104130 KO:K09091 CTD:23493
            OMA:TCASQRE RefSeq:NP_569101.1 UniGene:Rn.58672
            Ensembl:ENSRNOT00000018718 GeneID:155430 KEGG:rno:155430
            NextBio:620911 Uniprot:G3V7S6
        Length = 339

 Score = 123 (48.4 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
 Identities = 38/114 (33%), Positives = 64/114 (56%)

Query:   252 VVMSSPPLVASSNSIPPALKRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKL 311
             V+ S+ P   S   I    KR  + ++EKRRR RIN SL+ L+ L+  + + + +  +KL
Sbjct:    34 VMRSNSPTTTSQ--IMARKKR--RGIIEKRRRDRINNSLSELRRLVPTAFEKQGS--AKL 87

Query:   312 EKADILELTVRHLQRQKILSSD-------IRSKYKA-GYEECSREVSRFLETPE 357
             EKA+IL++TV HL+  +            + + + + G+ EC  EV+R+L + E
Sbjct:    88 EKAEILQMTVDHLKMLQATGGKGYFDAHALATDFMSIGFRECLTEVARYLSSVE 141

 Score = 44 (20.5 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
 Identities = 9/22 (40%), Positives = 11/22 (50%)

Query:   537 PNYMAPSTSPPCKDDLKSSPPP 558
             PN +  S S PC+    S  PP
Sbjct:   199 PNGLHTSESTPCRLSTSSEVPP 220

 Score = 37 (18.1 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
 Identities = 7/15 (46%), Positives = 9/15 (60%)

Query:   407 VRQRLFRHLENCMSE 421
             +R RL  HL  C S+
Sbjct:   149 LRVRLVSHLSTCASQ 163


>RGD|621339 [details] [associations]
            symbol:Hes3 "hairy and enhancer of split 3 (Drosophila)"
            species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
            of transcription from RNA polymerase II promoter" evidence=IEA;ISO]
            [GO:0001701 "in utero embryonic development" evidence=IEA;ISO]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0021555 "midbrain-hindbrain boundary
            morphogenesis" evidence=IEA;ISO] [GO:0021557 "oculomotor nerve
            development" evidence=IEA;ISO] [GO:0021558 "trochlear nerve
            development" evidence=IEA;ISO] [GO:0021575 "hindbrain
            morphogenesis" evidence=IEA;ISO] [GO:0021915 "neural tube
            development" evidence=ISO] [GO:0030901 "midbrain development"
            evidence=IEA;ISO] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=IDA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA;ISO] [GO:0046983 "protein dimerization activity"
            evidence=IEA] [GO:0050767 "regulation of neurogenesis"
            evidence=ISO] [GO:0060164 "regulation of timing of neuron
            differentiation" evidence=IEA;ISO] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 PROSITE:PS51054
            SMART:SM00353 RGD:621339 GO:GO:0005634 GO:GO:0045892 GO:GO:0003677
            GO:GO:0001701 GO:GO:0045944 GO:GO:0006351 GO:GO:0000122
            GO:GO:0030901 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0021575
            GeneTree:ENSGT00700000104130 GO:GO:0021555 HOGENOM:HOG000236346
            GO:GO:0021557 GO:GO:0060164 GO:GO:0021558 CTD:390992
            eggNOG:NOG272757 HOVERGEN:HBG005959 KO:K09088 OrthoDB:EOG4PVP15
            EMBL:D13418 IPI:IPI00188115 PIR:S36749 RefSeq:NP_073178.1
            UniGene:Rn.48807 ProteinModelPortal:Q04667 STRING:Q04667
            PRIDE:Q04667 Ensembl:ENSRNOT00000014536 GeneID:64628 KEGG:rno:64628
            InParanoid:Q04667 NextBio:613582 Genevestigator:Q04667
            GermOnline:ENSRNOG00000010893 Uniprot:Q04667
        Length = 175

 Score = 109 (43.4 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
 Identities = 25/48 (52%), Positives = 36/48 (75%)

Query:   278 MEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQ 325
             MEK+RRARIN SL  L++L L+   +   +  KLEKADILEL+V++++
Sbjct:     1 MEKKRRARINLSLEQLRSL-LERHYSHQIRKRKLEKADILELSVKYVR 47

 Score = 45 (20.9 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
 Identities = 15/43 (34%), Positives = 19/43 (44%)

Query:   543 STSPPCKDDLKSS-----PPPLSNLDQPLDFSIKRDDSMWRPW 580
             S  PP    L+SS     PPP SN       + +    +WRPW
Sbjct:   136 SPFPPLGGLLESSTGILAPPPASNCQAE---NPRPGFRVWRPW 175


>UNIPROTKB|Q5RCB0 [details] [associations]
            symbol:DKFZp459C0535 "Putative uncharacterized protein
            DKFZp459C0535" species:9601 "Pongo abelii" [GO:0003198 "epithelial
            to mesenchymal transition involved in endocardial cushion
            formation" evidence=ISS] InterPro:IPR003650 InterPro:IPR011598
            Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054
            SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR018352
            SMART:SM00511 GO:GO:0003198 CTD:23462 HOGENOM:HOG000286035
            HOVERGEN:HBG003275 KO:K09091 EMBL:CR858367 RefSeq:NP_001125323.1
            UniGene:Pab.8969 ProteinModelPortal:Q5RCB0 SMR:Q5RCB0
            GeneID:100172222 KEGG:pon:100172222 InParanoid:Q5RCB0
            Uniprot:Q5RCB0
        Length = 304

 Score = 127 (49.8 bits), Expect = 2.6e-05, P = 2.6e-05
 Identities = 37/108 (34%), Positives = 62/108 (57%)

Query:   258 PLVASSNSIPPALKRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADIL 317
             P+  +++S   A KR  + ++EKRRR RIN SL+ L+ L+  + + + +  +KLEKA+IL
Sbjct:    38 PMSPTTSSQILARKR-RRGIIEKRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEIL 94

Query:   318 ELTVRHLQRQKILSSD-------IRSKYKA-GYEECSREVSRFLETPE 357
             ++TV HL+               +   Y++ G+ EC  EV+R+L   E
Sbjct:    95 QMTVDHLKMLHTAGGKGYFDAHALAMDYRSLGFRECLAEVARYLSIIE 142


>UNIPROTKB|Q9Y5J3 [details] [associations]
            symbol:HEY1 "Hairy/enhancer-of-split related with YRPW
            motif protein 1" species:9606 "Homo sapiens" [GO:0046983 "protein
            dimerization activity" evidence=IEA] [GO:0001570 "vasculogenesis"
            evidence=IEA] [GO:0002076 "osteoblast development" evidence=IEA]
            [GO:0003199 "endocardial cushion to mesenchymal transition involved
            in heart valve formation" evidence=IEA] [GO:0003222 "ventricular
            trabecula myocardium morphogenesis" evidence=IEA] [GO:0009948
            "anterior/posterior axis specification" evidence=IEA] [GO:0045669
            "positive regulation of osteoblast differentiation" evidence=IEA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IMP;IDA] [GO:0005737 "cytoplasm"
            evidence=ISS] [GO:0007219 "Notch signaling pathway"
            evidence=IDA;TAS] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=IDA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0003198 "epithelial to mesenchymal transition involved in
            endocardial cushion formation" evidence=ISS] [GO:0000988 "protein
            binding transcription factor activity" evidence=IDA] [GO:0005634
            "nucleus" evidence=ISS] [GO:0035939 "microsatellite binding"
            evidence=IDA] [GO:0001525 "angiogenesis" evidence=IEP] [GO:0008134
            "transcription factor binding" evidence=NAS] [GO:0000983 "RNA
            polymerase II core promoter sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0045746 "negative
            regulation of Notch signaling pathway" evidence=IDA] [GO:2000678
            "negative regulation of transcription regulatory region DNA
            binding" evidence=IDA] [GO:0060347 "heart trabecula formation"
            evidence=ISS] [GO:0060411 "cardiac septum morphogenesis"
            evidence=ISS] [GO:0003190 "atrioventricular valve formation"
            evidence=ISS] [GO:0061314 "Notch signaling involved in heart
            development" evidence=IC] [GO:0035912 "dorsal aorta morphogenesis"
            evidence=ISS] [GO:0060842 "arterial endothelial cell
            differentiation" evidence=ISS] [GO:0060716 "labyrinthine layer
            blood vessel development" evidence=ISS] [GO:2001212 "regulation of
            vasculogenesis" evidence=ISS] [GO:0036304 "umbilical cord
            morphogenesis" evidence=ISS] [GO:0003184 "pulmonary valve
            morphogenesis" evidence=ISS] [GO:0003203 "endocardial cushion
            morphogenesis" evidence=ISS] [GO:0003208 "cardiac ventricle
            morphogenesis" evidence=ISS] [GO:0060317 "cardiac epithelial to
            mesenchymal transition" evidence=ISS] [GO:0060412 "ventricular
            septum morphogenesis" evidence=ISS] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=ISS] [GO:2000820 "negative regulation of transcription
            from RNA polymerase II promoter involved in smooth muscle cell
            differentiation" evidence=IDA] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 GO:GO:0005634 GO:GO:0005737
            Reactome:REACT_111102 GO:GO:0045944 GO:GO:0001525 GO:GO:0002076
            GO:GO:0045669 GO:GO:0001570 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GO:GO:0008134 GO:GO:0060716 GO:GO:0009948 GO:GO:0000983
            EMBL:CH471068 GO:GO:0060347 InterPro:IPR018352 SMART:SM00511
            GO:GO:0045746 GO:GO:0060412 GO:GO:0000988 GO:GO:0061314
            GO:GO:0035912 GO:GO:0003222 GO:GO:0003199 GO:GO:0003198
            GO:GO:2000678 GO:GO:0003190 CTD:23462 eggNOG:NOG241271
            HOGENOM:HOG000286035 HOVERGEN:HBG003275 KO:K09091 OMA:AHPDYSS
            OrthoDB:EOG4GB77H GO:GO:0035939 GO:GO:2000820 EMBL:AF151522
            EMBL:AF176422 EMBL:AJ272214 EMBL:AF232239 EMBL:AF311883
            EMBL:BT020065 EMBL:AK092437 EMBL:AK313271 EMBL:AC016240
            EMBL:BC001873 IPI:IPI00550054 IPI:IPI00742738 RefSeq:NP_001035798.1
            RefSeq:NP_036390.3 UniGene:Hs.234434 PDB:2DB7 PDBsum:2DB7
            ProteinModelPortal:Q9Y5J3 SMR:Q9Y5J3 MINT:MINT-1179634
            STRING:Q9Y5J3 PhosphoSite:Q9Y5J3 DMDM:13124298 PRIDE:Q9Y5J3
            DNASU:23462 Ensembl:ENST00000337919 Ensembl:ENST00000354724
            Ensembl:ENST00000542205 GeneID:23462 KEGG:hsa:23462 UCSC:uc003ybl.3
            UCSC:uc003ybm.3 GeneCards:GC08M080676 HGNC:HGNC:4880 MIM:602953
            neXtProt:NX_Q9Y5J3 PharmGKB:PA29258 ChiTaRS:HEY1
            EvolutionaryTrace:Q9Y5J3 GenomeRNAi:23462 NextBio:45771
            ArrayExpress:Q9Y5J3 Bgee:Q9Y5J3 CleanEx:HS_HEY1
            Genevestigator:Q9Y5J3 GermOnline:ENSG00000164683 GO:GO:0060842
            GO:GO:0003208 GO:GO:0003184 GO:GO:2001212 GO:GO:0036304
            Uniprot:Q9Y5J3
        Length = 304

 Score = 126 (49.4 bits), Expect = 3.4e-05, P = 3.4e-05
 Identities = 44/133 (33%), Positives = 71/133 (53%)

Query:   233 TVKKDTHSPPLKRSLNKTLVVMSSPPLVASSNSIPPALKRANKPLMEKRRRARINQSLAL 292
             T++ +  S     +L+  L  MS  P   SS  +  A KR  + ++EKRRR RIN SL+ 
Sbjct:    18 TIEVEKESADENGNLSSALGSMS--P-TTSSQIL--ARKR-RRGIIEKRRRDRINNSLSE 71

Query:   293 LKALILDSAKTENTKHSKLEKADILELTVRHLQRQKILSSD-------IRSKYKA-GYEE 344
             L+ L+  + + + +  +KLEKA+IL++TV HL+               +   Y++ G+ E
Sbjct:    72 LRRLVPSAFEKQGS--AKLEKAEILQMTVDHLKMLHTAGGKGYFDAHALAMDYRSLGFRE 129

Query:   345 CSREVSRFLETPE 357
             C  EV+R+L   E
Sbjct:   130 CLAEVARYLSIIE 142


>UNIPROTKB|F1RWM2 [details] [associations]
            symbol:HEY1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0003198 "epithelial to mesenchymal transition involved
            in endocardial cushion formation" evidence=ISS] [GO:2000820
            "negative regulation of transcription from RNA polymerase II
            promoter involved in smooth muscle cell differentiation"
            evidence=IEA] [GO:2000678 "negative regulation of transcription
            regulatory region DNA binding" evidence=IEA] [GO:0060840 "artery
            development" evidence=IEA] [GO:0045746 "negative regulation of
            Notch signaling pathway" evidence=IEA] [GO:0045669 "positive
            regulation of osteoblast differentiation" evidence=IEA] [GO:0035939
            "microsatellite binding" evidence=IEA] [GO:0009948
            "anterior/posterior axis specification" evidence=IEA] [GO:0007219
            "Notch signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0003222
            "ventricular trabecula myocardium morphogenesis" evidence=IEA]
            [GO:0003199 "endocardial cushion to mesenchymal transition involved
            in heart valve formation" evidence=IEA] [GO:0002076 "osteoblast
            development" evidence=IEA] [GO:0001570 "vasculogenesis"
            evidence=IEA] [GO:0001525 "angiogenesis" evidence=IEA] [GO:0000988
            "protein binding transcription factor activity" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0046983 "protein dimerization activity" evidence=IEA]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0005634
            GO:GO:0007219 GO:GO:0003700 GO:GO:0006351 GO:GO:0001525
            GO:GO:0002076 GO:GO:0060840 GO:GO:0045669 GO:GO:0001570
            Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0009948 InterPro:IPR018352
            SMART:SM00511 GO:GO:0045746 GO:GO:0000988 GO:GO:0003222
            GeneTree:ENSGT00700000104130 GO:GO:0003199 GO:GO:0003198
            GO:GO:2000678 CTD:23462 KO:K09091 OMA:AHPDYSS GO:GO:0035939
            GO:GO:2000820 EMBL:CU151844 RefSeq:XP_001928567.2 UniGene:Ssc.95897
            Ensembl:ENSSSCT00000006753 GeneID:100157952 KEGG:ssc:100157952
            Uniprot:F1RWM2
        Length = 304

 Score = 126 (49.4 bits), Expect = 3.4e-05, P = 3.4e-05
 Identities = 44/133 (33%), Positives = 71/133 (53%)

Query:   233 TVKKDTHSPPLKRSLNKTLVVMSSPPLVASSNSIPPALKRANKPLMEKRRRARINQSLAL 292
             T++ +  S     +L+  L  MS  P   SS  +  A KR  + ++EKRRR RIN SL+ 
Sbjct:    18 TIEVEKESADENGNLSSALGSMS--P-TTSSQIL--ARKR-RRGIIEKRRRDRINNSLSE 71

Query:   293 LKALILDSAKTENTKHSKLEKADILELTVRHLQRQKILSSD-------IRSKYKA-GYEE 344
             L+ L+  + + + +  +KLEKA+IL++TV HL+               +   Y++ G+ E
Sbjct:    72 LRRLVPSAFEKQGS--AKLEKAEILQMTVDHLKMLHTAGGKGYFDAHALAMDYRSLGFRE 129

Query:   345 CSREVSRFLETPE 357
             C  EV+R+L   E
Sbjct:   130 CLAEVARYLSIIE 142


>UNIPROTKB|F1NDT2 [details] [associations]
            symbol:HEY1 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0000988 "protein binding transcription factor activity"
            evidence=IEA] [GO:0001525 "angiogenesis" evidence=IEA] [GO:0001570
            "vasculogenesis" evidence=IEA] [GO:0002076 "osteoblast development"
            evidence=IEA] [GO:0003198 "epithelial to mesenchymal transition
            involved in endocardial cushion formation" evidence=IEA]
            [GO:0003199 "endocardial cushion to mesenchymal transition involved
            in heart valve formation" evidence=IEA] [GO:0003222 "ventricular
            trabecula myocardium morphogenesis" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007219
            "Notch signaling pathway" evidence=IEA] [GO:0009948
            "anterior/posterior axis specification" evidence=IEA] [GO:0035939
            "microsatellite binding" evidence=IEA] [GO:0045669 "positive
            regulation of osteoblast differentiation" evidence=IEA] [GO:0045746
            "negative regulation of Notch signaling pathway" evidence=IEA]
            [GO:0060840 "artery development" evidence=IEA] [GO:2000678
            "negative regulation of transcription regulatory region DNA
            binding" evidence=IEA] [GO:2000820 "negative regulation of
            transcription from RNA polymerase II promoter involved in smooth
            muscle cell differentiation" evidence=IEA] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 GO:GO:0005634 GO:GO:0007219
            GO:GO:0003700 GO:GO:0006351 GO:GO:0000122 GO:GO:0045669
            Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR018352 SMART:SM00511
            GO:GO:0045746 GO:GO:0000988 GeneTree:ENSGT00700000104130
            GO:GO:2000678 OMA:AHPDYSS GO:GO:0035939 EMBL:AADN02024740
            IPI:IPI00581431 Ensembl:ENSGALT00000025381 Uniprot:F1NDT2
        Length = 274

 Score = 125 (49.1 bits), Expect = 3.4e-05, P = 3.4e-05
 Identities = 38/113 (33%), Positives = 62/113 (54%)

Query:   254 MSSPPLVASSNSIPPALKRANKP-LMEKRRRARINQSLALLKALILDSAKTENTKHSKLE 312
             +SS    AS ++    L R  +  ++EKRRR RIN SL+ L+ L+  + + + +  +KLE
Sbjct:     2 LSSTAGSASPSATSQILARKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQGS--AKLE 59

Query:   313 KADILELTVRHLQRQKILSSD-------IRSKYKA-GYEECSREVSRFLETPE 357
             KA+IL++TV HL+               +   Y++ G+ EC  EV+R+L   E
Sbjct:    60 KAEILQMTVDHLKMLHTAGGKGYFDAHALAMDYRSLGFRECLAEVARYLSIIE 112


>FB|FBgn0259938 [details] [associations]
            symbol:cwo "clockwork orange" species:7227 "Drosophila
            melanogaster" [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983 "protein
            dimerization activity" evidence=IEA] [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=IDA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IDA] [GO:0042752
            "regulation of circadian rhythm" evidence=IMP] [GO:0032922
            "circadian regulation of gene expression" evidence=IMP]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 EMBL:AE014297
            GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
            GO:GO:0042752 GO:GO:0000122 GO:GO:0032922 Gene3D:4.10.280.10
            SUPFAM:SSF47459 InterPro:IPR018352 SMART:SM00511
            GeneTree:ENSGT00700000104168 FlyBase:FBgn0259938 RefSeq:NP_524775.1
            UniGene:Dm.11736 ProteinModelPortal:Q9VGZ5 SMR:Q9VGZ5 STRING:Q9VGZ5
            EnsemblMetazoa:FBtr0082246 GeneID:44669 KEGG:dme:Dmel_CG17100
            UCSC:CG17100-RA CTD:44669 InParanoid:Q9VGZ5 OMA:QDPLSHR
            PhylomeDB:Q9VGZ5 GenomeRNAi:44669 NextBio:837532
            ArrayExpress:Q9VGZ5 Bgee:Q9VGZ5 Uniprot:Q9VGZ5
        Length = 698

 Score = 131 (51.2 bits), Expect = 3.9e-05, P = 3.9e-05
 Identities = 27/77 (35%), Positives = 46/77 (59%)

Query:   277 LMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQRQKILSSDIRS 336
             ++EKRRR R+N  LA L  LI    + +     ++EK +I+E+ +RHL+  +       S
Sbjct:    69 IIEKRRRDRMNSCLADLSRLI--PPQYQRKGRGRIEKTEIIEMAIRHLKHLQSECQQKES 126

Query:   337 KYKAGYEECSREVSRFL 353
              Y++GY +C +E ++FL
Sbjct:   127 DYRSGYMDCMKEAAKFL 143


>UNIPROTKB|Q5TF93 [details] [associations]
            symbol:HEY2 "Hairy/enhancer-of-split-related with YRPW
            motif protein 2" species:9606 "Homo sapiens" [GO:0046983 "protein
            dimerization activity" evidence=IEA] [GO:0000983 "RNA polymerase II
            core promoter sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0000988 "protein binding transcription
            factor activity" evidence=IEA] [GO:0001570 "vasculogenesis"
            evidence=IEA] [GO:0003150 "muscular septum morphogenesis"
            evidence=IEA] [GO:0003151 "outflow tract morphogenesis"
            evidence=IEA] [GO:0003171 "atrioventricular valve development"
            evidence=IEA] [GO:0003184 "pulmonary valve morphogenesis"
            evidence=IEA] [GO:0003195 "tricuspid valve formation" evidence=IEA]
            [GO:0003199 "endocardial cushion to mesenchymal transition involved
            in heart valve formation" evidence=IEA] [GO:0003214 "cardiac left
            ventricle morphogenesis" evidence=IEA] [GO:0003215 "cardiac right
            ventricle morphogenesis" evidence=IEA] [GO:0003222 "ventricular
            trabecula myocardium morphogenesis" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0007219 "Notch signaling pathway" evidence=IEA] [GO:0008134
            "transcription factor binding" evidence=IEA] [GO:0009948
            "anterior/posterior axis specification" evidence=IEA] [GO:0010460
            "positive regulation of heart rate" evidence=IEA] [GO:0010667
            "negative regulation of cardiac muscle cell apoptotic process"
            evidence=IEA] [GO:0014898 "cardiac muscle hypertrophy in response
            to stress" evidence=IEA] [GO:0035910 "ascending aorta
            morphogenesis" evidence=IEA] [GO:0035912 "dorsal aorta
            morphogenesis" evidence=IEA] [GO:0035939 "microsatellite binding"
            evidence=IEA] [GO:0036304 "umbilical cord morphogenesis"
            evidence=IEA] [GO:0045165 "cell fate commitment" evidence=IEA]
            [GO:0045607 "regulation of auditory receptor cell differentiation"
            evidence=IEA] [GO:0045746 "negative regulation of Notch signaling
            pathway" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0055015 "ventricular cardiac muscle cell development"
            evidence=IEA] [GO:0060045 "positive regulation of cardiac muscle
            cell proliferation" evidence=IEA] [GO:0060347 "heart trabecula
            formation" evidence=IEA] [GO:0060413 "atrial septum morphogenesis"
            evidence=IEA] [GO:0060716 "labyrinthine layer blood vessel
            development" evidence=IEA] [GO:0060842 "arterial endothelial cell
            differentiation" evidence=IEA] [GO:0060948 "cardiac vascular smooth
            muscle cell development" evidence=IEA] [GO:0060977 "coronary
            vasculature morphogenesis" evidence=IEA] [GO:0061156 "pulmonary
            artery morphogenesis" evidence=IEA] [GO:0065004 "protein-DNA
            complex assembly" evidence=IEA] [GO:0090102 "cochlea development"
            evidence=IEA] [GO:2000678 "negative regulation of transcription
            regulatory region DNA binding" evidence=IEA] [GO:2000820 "negative
            regulation of transcription from RNA polymerase II promoter
            involved in smooth muscle cell differentiation" evidence=IEA]
            [GO:2001212 "regulation of vasculogenesis" evidence=IEA]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0005634
            GO:GO:0005737 GO:GO:0003677 GO:GO:0007219 GO:GO:0060840
            GO:GO:0010460 GO:GO:0001570 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GO:GO:0014898 GO:GO:0009948 GO:GO:0000983 GO:GO:0045165
            GO:GO:0090102 GO:GO:0055015 InterPro:IPR018352 SMART:SM00511
            GO:GO:0060045 GO:GO:0045746 GO:GO:0003222 GO:GO:0003199
            GO:GO:0065004 GO:GO:0003195 GO:GO:0010667 HOGENOM:HOG000286035
            HOVERGEN:HBG003275 GO:GO:2000820 EMBL:AL078594 UniGene:Hs.144287
            HGNC:HGNC:4881 GO:GO:0003171 GO:GO:0060948 GO:GO:0060977
            GO:GO:0045607 IPI:IPI00643805 SMR:Q5TF93 STRING:Q5TF93
            Ensembl:ENST00000368365 Uniprot:Q5TF93
        Length = 291

 Score = 121 (47.7 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
 Identities = 32/95 (33%), Positives = 55/95 (57%)

Query:   271 KRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQRQKIL 330
             ++  + ++EKRRR RIN SL+ L+ L+  + + + +  +KLEKA+IL++TV HL+  +  
Sbjct:     3 RKKRRGIIEKRRRDRINNSLSELRRLVPTAFEKQGS--AKLEKAEILQMTVDHLKMLQAT 60

Query:   331 SS----DIRSK----YKAGYEECSREVSRFLETPE 357
                   D  +        G+ EC  EV+R+L + E
Sbjct:    61 GGKGYFDAHALAMDFMSIGFRECLTEVARYLSSVE 95

 Score = 43 (20.2 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
 Identities = 9/22 (40%), Positives = 11/22 (50%)

Query:   537 PNYMAPSTSPPCKDDLKSSPPP 558
             PN +  S S PC+    S  PP
Sbjct:   153 PNGLHASESTPCRLSTTSEVPP 174

 Score = 37 (18.1 bits), Expect = 0.00018, Sum P(2) = 0.00017
 Identities = 9/27 (33%), Positives = 13/27 (48%)

Query:   555 SPP-PLSNLDQPLDFSIKRDDSMWRPW 580
             SPP  +S    P   S   ++  +RPW
Sbjct:   258 SPPLSVSATSSPQQTSSGTNNKPYRPW 284


>UNIPROTKB|F1S2V4 [details] [associations]
            symbol:HEY2 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:2001212 "regulation of vasculogenesis" evidence=IEA]
            [GO:2000820 "negative regulation of transcription from RNA
            polymerase II promoter involved in smooth muscle cell
            differentiation" evidence=IEA] [GO:2000678 "negative regulation of
            transcription regulatory region DNA binding" evidence=IEA]
            [GO:0090102 "cochlea development" evidence=IEA] [GO:0065004
            "protein-DNA complex assembly" evidence=IEA] [GO:0061156 "pulmonary
            artery morphogenesis" evidence=IEA] [GO:0060977 "coronary
            vasculature morphogenesis" evidence=IEA] [GO:0060948 "cardiac
            vascular smooth muscle cell development" evidence=IEA] [GO:0060842
            "arterial endothelial cell differentiation" evidence=IEA]
            [GO:0060716 "labyrinthine layer blood vessel development"
            evidence=IEA] [GO:0060633 "negative regulation of transcription
            initiation from RNA polymerase II promoter" evidence=IEA]
            [GO:0060413 "atrial septum morphogenesis" evidence=IEA] [GO:0060347
            "heart trabecula formation" evidence=IEA] [GO:0060045 "positive
            regulation of cardiac muscle cell proliferation" evidence=IEA]
            [GO:0055015 "ventricular cardiac muscle cell development"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0045746
            "negative regulation of Notch signaling pathway" evidence=IEA]
            [GO:0045607 "regulation of auditory receptor cell differentiation"
            evidence=IEA] [GO:0045165 "cell fate commitment" evidence=IEA]
            [GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0036304
            "umbilical cord morphogenesis" evidence=IEA] [GO:0035939
            "microsatellite binding" evidence=IEA] [GO:0035912 "dorsal aorta
            morphogenesis" evidence=IEA] [GO:0035910 "ascending aorta
            morphogenesis" evidence=IEA] [GO:0017053 "transcriptional repressor
            complex" evidence=IEA] [GO:0016580 "Sin3 complex" evidence=IEA]
            [GO:0014898 "cardiac muscle hypertrophy in response to stress"
            evidence=IEA] [GO:0010667 "negative regulation of cardiac muscle
            cell apoptotic process" evidence=IEA] [GO:0010460 "positive
            regulation of heart rate" evidence=IEA] [GO:0009948
            "anterior/posterior axis specification" evidence=IEA] [GO:0007219
            "Notch signaling pathway" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0003222 "ventricular trabecula myocardium
            morphogenesis" evidence=IEA] [GO:0003215 "cardiac right ventricle
            morphogenesis" evidence=IEA] [GO:0003214 "cardiac left ventricle
            morphogenesis" evidence=IEA] [GO:0003199 "endocardial cushion to
            mesenchymal transition involved in heart valve formation"
            evidence=IEA] [GO:0003195 "tricuspid valve formation" evidence=IEA]
            [GO:0003184 "pulmonary valve morphogenesis" evidence=IEA]
            [GO:0003171 "atrioventricular valve development" evidence=IEA]
            [GO:0003151 "outflow tract morphogenesis" evidence=IEA] [GO:0003150
            "muscular septum morphogenesis" evidence=IEA] [GO:0001570
            "vasculogenesis" evidence=IEA] [GO:0001102 "RNA polymerase II
            activating transcription factor binding" evidence=IEA] [GO:0000988
            "protein binding transcription factor activity" evidence=IEA]
            [GO:0000983 "RNA polymerase II core promoter sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0046983
            "protein dimerization activity" evidence=IEA] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 GO:GO:0005737 GO:GO:0017053
            GO:GO:0043565 GO:GO:0007219 GO:GO:0060840 GO:GO:0010460
            GO:GO:0001570 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0014898
            GO:GO:0009948 GO:GO:0000983 GO:GO:0045165 GO:GO:0090102
            GO:GO:0055015 InterPro:IPR018352 SMART:SM00511 GO:GO:0060045
            GO:GO:0045746 GO:GO:0060633 GO:GO:0016580 GO:GO:0003222
            GeneTree:ENSGT00700000104130 GO:GO:0003199 GO:GO:0065004
            GO:GO:0003195 GO:GO:0010667 KO:K09091 GO:GO:2000820 CTD:23493
            OMA:TCASQRE GO:GO:0003171 GO:GO:0060948 GO:GO:0060977 GO:GO:0045607
            EMBL:CU464159 RefSeq:NP_001230258.1 UniGene:Ssc.24610
            Ensembl:ENSSSCT00000004668 GeneID:100152404 KEGG:ssc:100152404
            Uniprot:F1S2V4
        Length = 337

 Score = 124 (48.7 bits), Expect = 5.3e-05, Sum P(3) = 5.3e-05
 Identities = 39/114 (34%), Positives = 62/114 (54%)

Query:   252 VVMSSPPLVASSNSIPPALKRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKL 311
             V+ S+ P   S   I    KR  + ++EKRRR RIN SL+ L+ L+  + + + +  +KL
Sbjct:    34 VIRSNSPTTTSQ--IMARKKR--RGIIEKRRRDRINNSLSELRRLVPTAFEKQGS--AKL 87

Query:   312 EKADILELTVRHLQRQKILSS----DIRSK----YKAGYEECSREVSRFLETPE 357
             EKA+IL++TV HL+  +        D  +        G+ EC  EV+R+L + E
Sbjct:    88 EKAEILQMTVDHLKMLQATGGKGYFDAHALAMDFMSIGFRECLTEVARYLSSVE 141

 Score = 38 (18.4 bits), Expect = 5.3e-05, Sum P(3) = 5.3e-05
 Identities = 9/21 (42%), Positives = 12/21 (57%)

Query:   403 IDSG--VRQRLFRHLENCMSE 421
             +DS   +R RL  HL  C S+
Sbjct:   143 LDSSDPLRVRLVSHLSTCASQ 163

 Score = 38 (18.4 bits), Expect = 5.3e-05, Sum P(3) = 5.3e-05
 Identities = 8/22 (36%), Positives = 11/22 (50%)

Query:   537 PNYMAPSTSPPCKDDLKSSPPP 558
             P+ +  S S PC+    S  PP
Sbjct:   199 PSGLHTSESTPCRLSTASEVPP 220

 Score = 37 (18.1 bits), Expect = 6.6e-05, Sum P(3) = 6.6e-05
 Identities = 9/27 (33%), Positives = 13/27 (48%)

Query:   555 SPP-PLSNLDQPLDFSIKRDDSMWRPW 580
             SPP  +S    P   S   ++  +RPW
Sbjct:   304 SPPLSVSATSSPQQTSSGTNNKPYRPW 330


>ZFIN|ZDB-GENE-980526-274 [details] [associations]
            symbol:her2 "hairy-related 2" species:7955 "Danio
            rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 ZFIN:ZDB-GENE-980526-274
            GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
            Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR018352 SMART:SM00511
            GeneTree:ENSGT00700000104168 HOGENOM:HOG000236346
            HOVERGEN:HBG005960 eggNOG:NOG313575 EMBL:CU633737 EMBL:BC162968
            EMBL:BC163000 EMBL:X97330 IPI:IPI00492101 RefSeq:NP_571164.1
            UniGene:Dr.135078 UniGene:Dr.75063 Ensembl:ENSDART00000055709
            GeneID:30300 KEGG:dre:30300 CTD:30300 OMA:ILEMAVI NextBio:20806742
            Uniprot:Q90464
        Length = 108

 Score = 104 (41.7 bits), Expect = 6.2e-05, P = 6.2e-05
 Identities = 30/77 (38%), Positives = 38/77 (49%)

Query:   282 RRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQRQ-----KILSSDIRS 336
             RR RIN+ +  LK L+    K      SKLEKADILE+ V +L+       +  S     
Sbjct:     2 RRDRINKCIEQLKILLKTEIKASQPC-SKLEKADILEMAVIYLKNTADAHARSYSEAHAQ 60

Query:   337 KYKAGYEECSREVSRFL 353
              Y  GY  C  E +RFL
Sbjct:    61 SYADGYSRCIEETARFL 77


>UNIPROTKB|Q5TGS1 [details] [associations]
            symbol:HES3 "Transcription factor HES-3" species:9606 "Homo
            sapiens" [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0001701 "in utero embryonic development" evidence=IEA]
            [GO:0021555 "midbrain-hindbrain boundary morphogenesis"
            evidence=IEA] [GO:0021557 "oculomotor nerve development"
            evidence=IEA] [GO:0021558 "trochlear nerve development"
            evidence=IEA] [GO:0021575 "hindbrain morphogenesis" evidence=IEA]
            [GO:0030901 "midbrain development" evidence=IEA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0060164 "regulation of timing of neuron
            differentiation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0008134 "transcription factor binding" evidence=NAS]
            InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 PROSITE:PS51054
            SMART:SM00353 GO:GO:0005634 GO:GO:0003677 GO:GO:0001701
            GO:GO:0045944 GO:GO:0006351 GO:GO:0000122 GO:GO:0030901
            Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0008134 GO:GO:0021575
            EMBL:AL031847 GO:GO:0021555 HOGENOM:HOG000236346 GO:GO:0021557
            GO:GO:0060164 GO:GO:0021558 IPI:IPI00376185 RefSeq:NP_001019769.1
            UniGene:Hs.532677 ProteinModelPortal:Q5TGS1 SMR:Q5TGS1
            STRING:Q5TGS1 DMDM:74746514 PRIDE:Q5TGS1 Ensembl:ENST00000377898
            GeneID:390992 KEGG:hsa:390992 UCSC:uc009vly.2 CTD:390992
            GeneCards:GC01P006304 HGNC:HGNC:26226 HPA:HPA047927 MIM:609971
            neXtProt:NX_Q5TGS1 PharmGKB:PA142671692 eggNOG:NOG272757
            HOVERGEN:HBG005959 InParanoid:Q5TGS1 KO:K09088 OMA:QGLWPVP
            OrthoDB:EOG4PVP15 GenomeRNAi:390992 NextBio:104203 CleanEx:HS_HES3
            Genevestigator:Q5TGS1 Uniprot:Q5TGS1
        Length = 186

 Score = 117 (46.2 bits), Expect = 6.6e-05, P = 6.6e-05
 Identities = 35/91 (38%), Positives = 52/91 (57%)

Query:   278 MEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQR-----QKILSS 332
             MEK+RRARIN SL  LK+L L+   +   +  KLEKADILEL+V++++      Q +   
Sbjct:     1 MEKKRRARINVSLEQLKSL-LEKHYSHQIRKRKLEKADILELSVKYMRSLQNSLQGLWPV 59

Query:   333 DIRSKYKAGYEECSREVSRFLET-PELHLGL 362
                ++  +G+  C   VS+ L    E+  GL
Sbjct:    60 PRGAEQPSGFRSCLPGVSQLLRRGDEVGSGL 90


>UNIPROTKB|G1K293 [details] [associations]
            symbol:HEY1 "Hairy/enhancer-of-split-related with YRPW
            motif protein 1" species:9615 "Canis lupus familiaris" [GO:2000820
            "negative regulation of transcription from RNA polymerase II
            promoter involved in smooth muscle cell differentiation"
            evidence=IEA] [GO:2000678 "negative regulation of transcription
            regulatory region DNA binding" evidence=IEA] [GO:0060840 "artery
            development" evidence=IEA] [GO:0045746 "negative regulation of
            Notch signaling pathway" evidence=IEA] [GO:0045669 "positive
            regulation of osteoblast differentiation" evidence=IEA] [GO:0035939
            "microsatellite binding" evidence=IEA] [GO:0009948
            "anterior/posterior axis specification" evidence=IEA] [GO:0007219
            "Notch signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0003222
            "ventricular trabecula myocardium morphogenesis" evidence=IEA]
            [GO:0003199 "endocardial cushion to mesenchymal transition involved
            in heart valve formation" evidence=IEA] [GO:0003198 "epithelial to
            mesenchymal transition involved in endocardial cushion formation"
            evidence=IEA] [GO:0002076 "osteoblast development" evidence=IEA]
            [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0001525
            "angiogenesis" evidence=IEA] [GO:0000988 "protein binding
            transcription factor activity" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
            dimerization activity" evidence=IEA] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 GO:GO:0005634 GO:GO:0007219
            GO:GO:0003700 GO:GO:0006351 GO:GO:0001525 GO:GO:0002076
            GO:GO:0060840 GO:GO:0045669 GO:GO:0001570 Gene3D:4.10.280.10
            SUPFAM:SSF47459 GO:GO:0009948 InterPro:IPR018352 SMART:SM00511
            GO:GO:0045746 GO:GO:0000988 GO:GO:0003222
            GeneTree:ENSGT00700000104130 GO:GO:0003199 GO:GO:0003198
            GO:GO:2000678 OMA:AHPDYSS GO:GO:0035939 GO:GO:2000820
            EMBL:AAEX03015894 Ensembl:ENSCAFT00000013332 Uniprot:G1K293
        Length = 304

 Score = 123 (48.4 bits), Expect = 7.5e-05, P = 7.5e-05
 Identities = 32/95 (33%), Positives = 55/95 (57%)

Query:   271 KRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQRQKIL 330
             ++  + ++EKRRR RIN SL+ L+ L+  + + + +  +KLEKA+IL++TV HL+     
Sbjct:    50 RKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTVDHLKMLHTA 107

Query:   331 SSD-------IRSKYKA-GYEECSREVSRFLETPE 357
                       +   Y++ G+ EC  EV+R+L   E
Sbjct:   108 GGKGYFDAHALAMDYRSLGFRECLAEVARYLSIIE 142


>UNIPROTKB|Q9UBP5 [details] [associations]
            symbol:HEY2 "Hairy/enhancer-of-split related with YRPW
            motif protein 2" species:9606 "Homo sapiens" [GO:0046983 "protein
            dimerization activity" evidence=IEA] [GO:0001570 "vasculogenesis"
            evidence=IEA] [GO:0003171 "atrioventricular valve development"
            evidence=IEA] [GO:0003195 "tricuspid valve formation" evidence=IEA]
            [GO:0003199 "endocardial cushion to mesenchymal transition involved
            in heart valve formation" evidence=IEA] [GO:0003222 "ventricular
            trabecula myocardium morphogenesis" evidence=IEA] [GO:0009948
            "anterior/posterior axis specification" evidence=IEA] [GO:0010460
            "positive regulation of heart rate" evidence=IEA] [GO:0010667
            "negative regulation of cardiac muscle cell apoptotic process"
            evidence=IEA] [GO:0014898 "cardiac muscle hypertrophy in response
            to stress" evidence=IEA] [GO:0045165 "cell fate commitment"
            evidence=IEA] [GO:0045607 "regulation of auditory receptor cell
            differentiation" evidence=IEA] [GO:0045746 "negative regulation of
            Notch signaling pathway" evidence=IEA] [GO:0060045 "positive
            regulation of cardiac muscle cell proliferation" evidence=IEA]
            [GO:0060347 "heart trabecula formation" evidence=IEA] [GO:0060948
            "cardiac vascular smooth muscle cell development" evidence=IEA]
            [GO:0060977 "coronary vasculature morphogenesis" evidence=IEA]
            [GO:0065004 "protein-DNA complex assembly" evidence=IEA]
            [GO:0090102 "cochlea development" evidence=IEA] [GO:0000122
            "negative regulation of transcription from RNA polymerase II
            promoter" evidence=IMP;IDA] [GO:0000988 "protein binding
            transcription factor activity" evidence=IDA] [GO:0005634 "nucleus"
            evidence=ISS] [GO:0010629 "negative regulation of gene expression"
            evidence=ISS] [GO:0007219 "Notch signaling pathway"
            evidence=ISS;TAS] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=IDA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0055015
            "ventricular cardiac muscle cell development" evidence=ISS]
            [GO:0097084 "vascular smooth muscle cell development" evidence=IEP]
            [GO:0035939 "microsatellite binding" evidence=IDA] [GO:0008134
            "transcription factor binding" evidence=NAS] [GO:0000983 "RNA
            polymerase II core promoter sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0003208 "cardiac
            ventricle morphogenesis" evidence=ISS] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0042826 "histone deacetylase binding"
            evidence=IPI] [GO:2000678 "negative regulation of transcription
            regulatory region DNA binding" evidence=IDA] [GO:0060633 "negative
            regulation of transcription initiation from RNA polymerase II
            promoter" evidence=IDA] [GO:0016580 "Sin3 complex" evidence=IDA]
            [GO:0017053 "transcriptional repressor complex" evidence=IDA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IDA]
            [GO:0001102 "RNA polymerase II activating transcription factor
            binding" evidence=IPI] [GO:0003150 "muscular septum morphogenesis"
            evidence=ISS] [GO:0003151 "outflow tract morphogenesis"
            evidence=ISS] [GO:0003184 "pulmonary valve morphogenesis"
            evidence=ISS] [GO:0003186 "tricuspid valve morphogenesis"
            evidence=ISS] [GO:0003214 "cardiac left ventricle morphogenesis"
            evidence=ISS] [GO:0003215 "cardiac right ventricle morphogenesis"
            evidence=ISS] [GO:0035910 "ascending aorta morphogenesis"
            evidence=ISS] [GO:0060412 "ventricular septum morphogenesis"
            evidence=ISS] [GO:0060413 "atrial septum morphogenesis"
            evidence=ISS] [GO:0061156 "pulmonary artery morphogenesis"
            evidence=ISS] [GO:0061314 "Notch signaling involved in heart
            development" evidence=IC] [GO:0060411 "cardiac septum
            morphogenesis" evidence=ISS] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0035912 "dorsal aorta morphogenesis" evidence=ISS] [GO:0060842
            "arterial endothelial cell differentiation" evidence=ISS]
            [GO:0060716 "labyrinthine layer blood vessel development"
            evidence=ISS] [GO:0036304 "umbilical cord morphogenesis"
            evidence=ISS] [GO:2001212 "regulation of vasculogenesis"
            evidence=ISS] [GO:0051145 "smooth muscle cell differentiation"
            evidence=NAS] [GO:0014031 "mesenchymal cell development"
            evidence=ISS] [GO:0060317 "cardiac epithelial to mesenchymal
            transition" evidence=ISS] [GO:0010621 "negative regulation of
            transcription by transcription factor localization" evidence=ISS]
            [GO:2000723 "negative regulation of cardiac vascular smooth muscle
            cell differentiation" evidence=ISS] [GO:2000820 "negative
            regulation of transcription from RNA polymerase II promoter
            involved in smooth muscle cell differentiation" evidence=ISS]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0005737
            Reactome:REACT_111102 GO:GO:0017053 GO:GO:0045944 GO:GO:0060317
            GO:GO:0010460 GO:GO:0097084 GO:GO:0001570 Gene3D:4.10.280.10
            SUPFAM:SSF47459 GO:GO:0008134 GO:GO:0060716 GO:GO:0014898
            GO:GO:0009948 GO:GO:0003151 GO:GO:0000983 GO:GO:0045165
            GO:GO:0090102 GO:GO:0055015 InterPro:IPR018352 SMART:SM00511
            GO:GO:0060045 GO:GO:0045746 GO:GO:0003214 GO:GO:0060413
            GO:GO:0061156 GO:GO:0060633 GO:GO:0000988 GO:GO:0061314
            GO:GO:0035912 GO:GO:0003222 GO:GO:0003199 GO:GO:0065004
            GO:GO:0003195 GO:GO:0003215 GO:GO:0003150 GO:GO:2000678
            GO:GO:0010667 GO:GO:0010621 GO:GO:0035910 HOGENOM:HOG000286035
            HOVERGEN:HBG003275 KO:K09091 OrthoDB:EOG4GB77H GO:GO:0035939
            GO:GO:2000820 GO:GO:0060842 GO:GO:0003184 GO:GO:2001212
            GO:GO:0036304 CTD:23493 eggNOG:NOG324798 OMA:TCASQRE EMBL:AJ249545
            EMBL:AF237949 EMBL:AF173901 EMBL:AF311884 EMBL:AF232238
            EMBL:AB044755 EMBL:BT020067 EMBL:BT020068 EMBL:AL078594
            EMBL:BC007707 IPI:IPI00016845 RefSeq:NP_036391.1 UniGene:Hs.144287
            ProteinModelPortal:Q9UBP5 SMR:Q9UBP5 IntAct:Q9UBP5
            MINT:MINT-1469894 STRING:Q9UBP5 PhosphoSite:Q9UBP5 DMDM:74762767
            PRIDE:Q9UBP5 DNASU:23493 Ensembl:ENST00000368364 GeneID:23493
            KEGG:hsa:23493 UCSC:uc003qad.3 GeneCards:GC06P126068 HGNC:HGNC:4881
            HPA:HPA030205 MIM:604674 neXtProt:NX_Q9UBP5 PharmGKB:PA29259
            InParanoid:Q9UBP5 PhylomeDB:Q9UBP5 GenomeRNAi:23493 NextBio:45859
            ArrayExpress:Q9UBP5 Bgee:Q9UBP5 CleanEx:HS_HEY2
            Genevestigator:Q9UBP5 GermOnline:ENSG00000135547 GO:GO:0003171
            GO:GO:0060948 GO:GO:0060977 GO:GO:2000723 GO:GO:0045607
            GO:GO:0003186 Uniprot:Q9UBP5
        Length = 337

 Score = 121 (47.7 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
 Identities = 32/95 (33%), Positives = 55/95 (57%)

Query:   271 KRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQRQKIL 330
             ++  + ++EKRRR RIN SL+ L+ L+  + + + +  +KLEKA+IL++TV HL+  +  
Sbjct:    49 RKKRRGIIEKRRRDRINNSLSELRRLVPTAFEKQGS--AKLEKAEILQMTVDHLKMLQAT 106

Query:   331 SS----DIRSK----YKAGYEECSREVSRFLETPE 357
                   D  +        G+ EC  EV+R+L + E
Sbjct:   107 GGKGYFDAHALAMDFMSIGFRECLTEVARYLSSVE 141

 Score = 43 (20.2 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
 Identities = 9/22 (40%), Positives = 11/22 (50%)

Query:   537 PNYMAPSTSPPCKDDLKSSPPP 558
             PN +  S S PC+    S  PP
Sbjct:   199 PNGLHASESTPCRLSTTSEVPP 220

 Score = 37 (18.1 bits), Expect = 0.00032, Sum P(2) = 0.00032
 Identities = 9/27 (33%), Positives = 13/27 (48%)

Query:   555 SPP-PLSNLDQPLDFSIKRDDSMWRPW 580
             SPP  +S    P   S   ++  +RPW
Sbjct:   304 SPPLSVSATSSPQQTSSGTNNKPYRPW 330


>ZFIN|ZDB-GENE-000526-1 [details] [associations]
            symbol:hey2 "hairy/enhancer-of-split related with
            YRPW motif 2" species:7955 "Danio rerio" [GO:0046983 "protein
            dimerization activity" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0048514 "blood vessel
            morphogenesis" evidence=IMP] [GO:0035912 "dorsal aorta
            morphogenesis" evidence=IMP] [GO:0001568 "blood vessel development"
            evidence=IMP] [GO:0060853 "Notch signaling pathway involved in
            arterial endothelial cell fate commitment" evidence=IMP]
            [GO:0001570 "vasculogenesis" evidence=IMP] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0007219 "Notch signaling pathway"
            evidence=IEA] [GO:0048844 "artery morphogenesis" evidence=IMP]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=IGI] [GO:0007507 "heart development" evidence=IMP]
            [GO:0005515 "protein binding" evidence=IPI] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 ZFIN:ZDB-GENE-000526-1 GO:GO:0005634
            GO:GO:0045892 GO:GO:0007507 GO:GO:0003677 GO:GO:0006351
            GO:GO:0001570 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR018352
            SMART:SM00511 GO:GO:0035912 GeneTree:ENSGT00700000104130
            HOGENOM:HOG000286035 HOVERGEN:HBG003275 KO:K09091 OrthoDB:EOG4GB77H
            EMBL:AF237948 EMBL:BC114263 IPI:IPI00502870 RefSeq:NP_571697.2
            UniGene:Dr.81319 ProteinModelPortal:Q9I9L0 SMR:Q9I9L0
            DIP:DIP-46472N STRING:Q9I9L0 Ensembl:ENSDART00000023531
            GeneID:58146 KEGG:dre:58146 CTD:23493 eggNOG:NOG324798
            InParanoid:Q9I9L0 OMA:TCASQRE NextBio:20892394 ArrayExpress:Q9I9L0
            Bgee:Q9I9L0 GO:GO:0060853 Uniprot:Q9I9L0
        Length = 324

 Score = 124 (48.7 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
 Identities = 33/95 (34%), Positives = 55/95 (57%)

Query:   271 KRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQRQKIL 330
             ++  + ++EKRRR RIN SL+ L+ L+  + + + +  +KLEKA+IL++TV HL+  +  
Sbjct:    49 RKKRRGIIEKRRRDRINNSLSELRRLVPTAFEKQGS--AKLEKAEILQMTVDHLKMLQAT 106

Query:   331 SS----DIRSK----YKAGYEECSREVSRFLETPE 357
                   D  S        G+ EC  EV+R+L + E
Sbjct:   107 GGKGYFDAHSLAMDFLSIGFRECLTEVARYLSSVE 141

 Score = 39 (18.8 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
 Identities = 9/21 (42%), Positives = 13/21 (61%)

Query:   403 IDSG--VRQRLFRHLENCMSE 421
             +DS   +R RL  HL +C S+
Sbjct:   143 LDSSDPLRVRLVSHLSSCASQ 163


>UNIPROTKB|D2HYE8 [details] [associations]
            symbol:HEY1 "Uncharacterized protein" species:9646
            "Ailuropoda melanoleuca" [GO:0003198 "epithelial to mesenchymal
            transition involved in endocardial cushion formation" evidence=ISS]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0005634
            GO:GO:0007219 GO:GO:0003700 GO:GO:0006351 GO:GO:0001525
            GO:GO:0002076 GO:GO:0060840 GO:GO:0045669 GO:GO:0001570
            Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0009948 InterPro:IPR018352
            SMART:SM00511 GO:GO:0045746 GO:GO:0000988 GO:GO:0003222
            GeneTree:ENSGT00700000104130 GO:GO:0003199 GO:GO:0003198
            GO:GO:2000678 HOGENOM:HOG000286035 OMA:AHPDYSS GO:GO:0035939
            GO:GO:2000820 EMBL:ACTA01043244 EMBL:GL193697
            Ensembl:ENSAMET00000019253 Uniprot:D2HYE8
        Length = 308

 Score = 122 (48.0 bits), Expect = 9.9e-05, P = 9.9e-05
 Identities = 47/135 (34%), Positives = 70/135 (51%)

Query:   233 TVKKDTHSPPLKRSLNKTLVVMSSPPLVASSNSIPPALKRANKPLMEKRRRARINQSLAL 292
             T++ +  S     +L+  L  MS  P   SS  +  A KR  + ++EKRRR RIN SL+ 
Sbjct:    18 TIEVEKESADENGNLSSALGSMS--P-TTSSQIL--ARKR-RRGIIEKRRRDRINNSLSE 71

Query:   293 LKALILDS-AKTENTKHS-KLEKADILELTVRHLQRQKILSSD-------IRSKYKA-GY 342
             L+ L+  +  K    K S KLEKA+IL++TV HL+               +   Y++ G+
Sbjct:    72 LRRLVPSAFEKQVMEKGSAKLEKAEILQMTVDHLKMLHTAGGKGYFDAHALAMDYRSLGF 131

Query:   343 EECSREVSRFLETPE 357
              EC  EV+R+L   E
Sbjct:   132 RECLAEVARYLSIIE 146


>UNIPROTKB|E2R0Q2 [details] [associations]
            symbol:HES3 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0060164 "regulation of timing of neuron
            differentiation" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0030901 "midbrain development" evidence=IEA] [GO:0021575
            "hindbrain morphogenesis" evidence=IEA] [GO:0021558 "trochlear
            nerve development" evidence=IEA] [GO:0021557 "oculomotor nerve
            development" evidence=IEA] [GO:0021555 "midbrain-hindbrain boundary
            morphogenesis" evidence=IEA] [GO:0001701 "in utero embryonic
            development" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0046983 "protein dimerization activity" evidence=IEA]
            InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
            GO:GO:0001701 GO:GO:0045944 GO:GO:0000122 GO:GO:0030901
            Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0021575
            GeneTree:ENSGT00700000104130 GO:GO:0021555 GO:GO:0021557
            GO:GO:0060164 GO:GO:0021558 OMA:QGLWPVP EMBL:AAEX03003900
            Ensembl:ENSCAFT00000031110 Uniprot:E2R0Q2
        Length = 175

 Score = 114 (45.2 bits), Expect = 0.00010, P = 0.00010
 Identities = 26/48 (54%), Positives = 36/48 (75%)

Query:   278 MEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQ 325
             MEK+RRARIN SL  LK+L L+   +   +  KLEKADILEL+V++++
Sbjct:     1 MEKKRRARINVSLEQLKSL-LEKHYSHQIRKRKLEKADILELSVKYMK 47


>MGI|MGI:1341884 [details] [associations]
            symbol:Hey2 "hairy/enhancer-of-split related with YRPW motif
            2" species:10090 "Mus musculus" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter"
            evidence=ISO;IGI;IMP;IDA] [GO:0000983 "RNA polymerase II core
            promoter sequence-specific DNA binding transcription factor
            activity" evidence=IDA] [GO:0000988 "protein binding transcription
            factor activity" evidence=ISO;IDA] [GO:0001102 "RNA polymerase II
            activating transcription factor binding" evidence=ISO] [GO:0001568
            "blood vessel development" evidence=IGI] [GO:0001570
            "vasculogenesis" evidence=IGI] [GO:0003150 "muscular septum
            morphogenesis" evidence=IMP] [GO:0003151 "outflow tract
            morphogenesis" evidence=IMP] [GO:0003171 "atrioventricular valve
            development" evidence=IMP] [GO:0003184 "pulmonary valve
            morphogenesis" evidence=IMP] [GO:0003186 "tricuspid valve
            morphogenesis" evidence=IMP] [GO:0003195 "tricuspid valve
            formation" evidence=IMP] [GO:0003199 "endocardial cushion to
            mesenchymal transition involved in heart valve formation"
            evidence=IGI] [GO:0003208 "cardiac ventricle morphogenesis"
            evidence=IMP] [GO:0003214 "cardiac left ventricle morphogenesis"
            evidence=IMP] [GO:0003215 "cardiac right ventricle morphogenesis"
            evidence=IMP] [GO:0003222 "ventricular trabecula myocardium
            morphogenesis" evidence=IGI] [GO:0003300 "cardiac muscle
            hypertrophy" evidence=IMP] [GO:0003677 "DNA binding" evidence=IMP]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=ISO;ISS;IDA] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005667
            "transcription factor complex" evidence=ISS] [GO:0005737
            "cytoplasm" evidence=IDA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
            of transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0007219 "Notch signaling pathway" evidence=ISO;IDA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0007389
            "pattern specification process" evidence=IGI;IMP] [GO:0008134
            "transcription factor binding" evidence=IPI] [GO:0009948
            "anterior/posterior axis specification" evidence=IGI] [GO:0010460
            "positive regulation of heart rate" evidence=IMP] [GO:0010468
            "regulation of gene expression" evidence=IMP] [GO:0010629 "negative
            regulation of gene expression" evidence=IMP] [GO:0010667 "negative
            regulation of cardiac muscle cell apoptotic process" evidence=IMP]
            [GO:0014031 "mesenchymal cell development" evidence=IMP]
            [GO:0014898 "cardiac muscle hypertrophy in response to stress"
            evidence=IDA] [GO:0017053 "transcriptional repressor complex"
            evidence=ISO] [GO:0035910 "ascending aorta morphogenesis"
            evidence=IMP] [GO:0035912 "dorsal aorta morphogenesis"
            evidence=IGI] [GO:0035939 "microsatellite binding"
            evidence=ISO;IDA] [GO:0036304 "umbilical cord morphogenesis"
            evidence=IGI] [GO:0042826 "histone deacetylase binding"
            evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
            evidence=ISO;IDA] [GO:0045165 "cell fate commitment" evidence=IMP]
            [GO:0045607 "regulation of auditory receptor cell differentiation"
            evidence=IGI] [GO:0045746 "negative regulation of Notch signaling
            pathway" evidence=IDA;IMP] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=ISO;IDA;IMP] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IMP] [GO:0046983 "protein dimerization activity"
            evidence=IEA] [GO:0055015 "ventricular cardiac muscle cell
            development" evidence=IMP] [GO:0060045 "positive regulation of
            cardiac muscle cell proliferation" evidence=IMP] [GO:0060317
            "cardiac epithelial to mesenchymal transition" evidence=IMP]
            [GO:0060347 "heart trabecula formation" evidence=IMP] [GO:0060411
            "cardiac septum morphogenesis" evidence=IMP] [GO:0060412
            "ventricular septum morphogenesis" evidence=IMP] [GO:0060413
            "atrial septum morphogenesis" evidence=IMP] [GO:0060633 "negative
            regulation of transcription initiation from RNA polymerase II
            promoter" evidence=ISO] [GO:0060716 "labyrinthine layer blood
            vessel development" evidence=IGI] [GO:0060840 "artery development"
            evidence=IGI] [GO:0060842 "arterial endothelial cell
            differentiation" evidence=IGI] [GO:0060948 "cardiac vascular smooth
            muscle cell development" evidence=IMP] [GO:0060977 "coronary
            vasculature morphogenesis" evidence=IMP] [GO:0061156 "pulmonary
            artery morphogenesis" evidence=IMP] [GO:0061314 "Notch signaling
            involved in heart development" evidence=IC] [GO:0065004
            "protein-DNA complex assembly" evidence=IDA] [GO:0090102 "cochlea
            development" evidence=IGI;IMP] [GO:2000678 "negative regulation of
            transcription regulatory region DNA binding" evidence=ISO;IDA]
            [GO:2000820 "negative regulation of transcription from RNA
            polymerase II promoter involved in smooth muscle cell
            differentiation" evidence=IDA] [GO:2001212 "regulation of
            vasculogenesis" evidence=IGI] InterPro:IPR003650 InterPro:IPR011598
            Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054
            SMART:SM00353 MGI:MGI:1341884 GO:GO:0005737 GO:GO:0017053
            GO:GO:0045944 Reactome:REACT_115202 GO:GO:0005667 GO:GO:0010460
            GO:GO:0001570 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0060716
            GO:GO:0014898 GO:GO:0009948 GO:GO:0003151 GO:GO:0000983
            GO:GO:0045165 GO:GO:0090102 GO:GO:0055015 GO:GO:0060347
            InterPro:IPR018352 SMART:SM00511 GO:GO:0060045 GO:GO:0045746
            GO:GO:0003214 GO:GO:0060413 GO:GO:0061156 GO:GO:0060633
            GO:GO:0000988 GO:GO:0016580 GO:GO:0061314 GO:GO:0035912
            GO:GO:0003222 GeneTree:ENSGT00700000104130 GO:GO:0003199
            GO:GO:0065004 GO:GO:0003195 GO:GO:0003215 GO:GO:0003150
            GO:GO:2000678 GO:GO:0010667 GO:GO:0035910 HOGENOM:HOG000286035
            HOVERGEN:HBG003275 KO:K09091 OrthoDB:EOG4GB77H GO:GO:0035939
            GO:GO:2000820 GO:GO:0060842 GO:GO:0003184 GO:GO:2001212
            GO:GO:0036304 CTD:23493 eggNOG:NOG324798 OMA:TCASQRE GO:GO:0003171
            GO:GO:0060948 GO:GO:0060977 GO:GO:0045607 EMBL:AF172287
            EMBL:AJ271867 EMBL:AF173902 EMBL:AF232240 EMBL:AB093589
            EMBL:AK031506 EMBL:AK158000 EMBL:BC103575 EMBL:BC103576
            IPI:IPI00132126 RefSeq:NP_038932.1 UniGene:Mm.103573
            ProteinModelPortal:Q9QUS4 SMR:Q9QUS4 IntAct:Q9QUS4 STRING:Q9QUS4
            PhosphoSite:Q9QUS4 PRIDE:Q9QUS4 Ensembl:ENSMUST00000019924
            GeneID:15214 KEGG:mmu:15214 InParanoid:Q9QUS4 NextBio:287789
            Bgee:Q9QUS4 CleanEx:MM_HEY2 Genevestigator:Q9QUS4
            GermOnline:ENSMUSG00000019789 Uniprot:Q9QUS4
        Length = 339

 Score = 123 (48.4 bits), Expect = 0.00011, Sum P(3) = 0.00011
 Identities = 38/114 (33%), Positives = 64/114 (56%)

Query:   252 VVMSSPPLVASSNSIPPALKRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKL 311
             V+ S+ P   S   I    KR  + ++EKRRR RIN SL+ L+ L+  + + + +  +KL
Sbjct:    34 VMRSNSPTTTSQ--IMARKKR--RGIIEKRRRDRINNSLSELRRLVPTAFEKQGS--AKL 87

Query:   312 EKADILELTVRHLQRQKILSSD-------IRSKYKA-GYEECSREVSRFLETPE 357
             EKA+IL++TV HL+  +            + + + + G+ EC  EV+R+L + E
Sbjct:    88 EKAEILQMTVDHLKMLQATGGKGYFDAHALATDFMSIGFRECLTEVARYLSSVE 141

 Score = 37 (18.1 bits), Expect = 0.00011, Sum P(3) = 0.00011
 Identities = 7/15 (46%), Positives = 9/15 (60%)

Query:   407 VRQRLFRHLENCMSE 421
             +R RL  HL  C S+
Sbjct:   149 LRVRLVSHLSTCASQ 163

 Score = 37 (18.1 bits), Expect = 0.00011, Sum P(3) = 0.00011
 Identities = 8/21 (38%), Positives = 10/21 (47%)

Query:   537 PNYMAPSTSPPCKDDLKSSPP 557
             PN +  S S PC+    S  P
Sbjct:   199 PNGLHTSESTPCRLSTSSEVP 219


>FB|FBgn0000591 [details] [associations]
            symbol:E(spl)m8-HLH "Enhancer of split m8, helix-loop-helix"
            species:7227 "Drosophila melanogaster" [GO:0007398 "ectoderm
            development" evidence=TAS] [GO:0007498 "mesoderm development"
            evidence=IMP] [GO:0001078 "RNA polymerase II core promoter proximal
            region sequence-specific DNA binding transcription factor activity
            involved in negative regulation of transcription" evidence=IDA]
            [GO:0046982 "protein heterodimerization activity" evidence=IPI]
            [GO:0042803 "protein homodimerization activity" evidence=IPI]
            [GO:0008587 "imaginal disc-derived wing margin morphogenesis"
            evidence=NAS] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=ISS;NAS] [GO:0043565
            "sequence-specific DNA binding" evidence=IDA] [GO:0003677 "DNA
            binding" evidence=NAS] [GO:0005634 "nucleus" evidence=NAS]
            [GO:0045165 "cell fate commitment" evidence=NAS] [GO:0048749
            "compound eye development" evidence=IMP;TAS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=TAS] [GO:0007422 "peripheral nervous system development"
            evidence=TAS] [GO:0007173 "epidermal growth factor receptor
            signaling pathway" evidence=NAS] [GO:0007219 "Notch signaling
            pathway" evidence=NAS] [GO:0045468 "regulation of R8 cell spacing
            in compound eye" evidence=NAS] [GO:0010629 "negative regulation of
            gene expression" evidence=IMP] [GO:0016360 "sensory organ precursor
            cell fate determination" evidence=IMP] [GO:0048813 "dendrite
            morphogenesis" evidence=IMP] [GO:0048666 "neuron development"
            evidence=IMP] InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010
            Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353
            EMBL:AE014297 GO:GO:0005634 GO:GO:0007173 GO:GO:0007498
            GO:GO:0001078 GO:GO:0043565 GO:GO:0007219 GO:GO:0007422
            GO:GO:0048813 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0007398
            GO:GO:0016360 GO:GO:0008587 InterPro:IPR018352 SMART:SM00511
            GO:GO:0045468 GeneTree:ENSGT00700000104130 KO:K09090 EMBL:AY779906
            EMBL:AY779907 EMBL:AY779908 EMBL:AY779909 EMBL:AY779910
            EMBL:AY779911 EMBL:AY779912 EMBL:AY779913 EMBL:AY779914
            EMBL:AY779915 EMBL:AY779916 EMBL:AY779917 EMBL:AY779918
            EMBL:AY779919 EMBL:AY779920 EMBL:AY779921 EMBL:X16553 EMBL:BT028829
            EMBL:BT028834 EMBL:BT028861 EMBL:BT028867 EMBL:DQ138662 PIR:S03627
            RefSeq:NP_524513.1 UniGene:Dm.27416 ProteinModelPortal:P13098
            SMR:P13098 DIP:DIP-22511N IntAct:P13098 MINT:MINT-188618
            STRING:P13098 PRIDE:P13098 EnsemblMetazoa:FBtr0084961 GeneID:43161
            KEGG:dme:Dmel_CG8365 CTD:43161 FlyBase:FBgn0000591 eggNOG:NOG283775
            InParanoid:Q5S474 OMA:YMNAVNE OrthoDB:EOG473N7H PhylomeDB:P13098
            GenomeRNAi:43161 NextBio:832482 Bgee:P13098 GermOnline:CG8365
            Uniprot:P13098
        Length = 179

 Score = 107 (42.7 bits), Expect = 0.00013, Sum P(2) = 0.00013
 Identities = 30/100 (30%), Positives = 57/100 (57%)

Query:   271 KRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQRQKI- 329
             ++  KP++E++RRAR+N+ L  LK L+ +    +     +++KA++LE  V  +++QK  
Sbjct:    11 QKVKKPMLERQRRARMNKCLDNLKTLVAELRGDDGIL--RMDKAEMLESAVIFMRQQKTP 68

Query:   330 --LSSDIRS----KYKAGYEECSREVSRFL-ETPELHLGL 362
               ++ + +S     +K GY     EVSR +  TP + + L
Sbjct:    69 KKVAQEEQSLPLDSFKNGYMNAVNEVSRVMASTPGMSVDL 108

 Score = 42 (19.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
 Identities = 7/21 (33%), Positives = 9/21 (42%)

Query:   560 SNLDQPLDFSIKRDDSMWRPW 580
             S+ D P          +WRPW
Sbjct:   159 SDCDSPAPSPQPMQQPLWRPW 179


>UNIPROTKB|K7EJN2 [details] [associations]
            symbol:HES2 "Transcription factor HES-2" species:9606 "Homo
            sapiens" [GO:0046983 "protein dimerization activity" evidence=IEA]
            InterPro:IPR011598 Pfam:PF00010 Gene3D:4.10.280.10 EMBL:AL031848
            HGNC:HGNC:16005 Ensembl:ENST00000487437 Uniprot:K7EJN2
        Length = 77

 Score = 101 (40.6 bits), Expect = 0.00013, P = 0.00013
 Identities = 21/29 (72%), Positives = 26/29 (89%)

Query:   270 LKRANKPLMEKRRRARINQSLALLKALIL 298
             L+++ KPL+EKRRRARINQSL+ LK LIL
Sbjct:    13 LRKSLKPLLEKRRRARINQSLSQLKGLIL 41


>ZFIN|ZDB-GENE-000607-70 [details] [associations]
            symbol:hey1 "hairy/enhancer-of-split related with
            YRPW motif 1" species:7955 "Danio rerio" [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
            dimerization activity" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007219
            "Notch signaling pathway" evidence=IEA] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 ZFIN:ZDB-GENE-000607-70 GO:GO:0007275
            GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0007219
            GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR018352
            SMART:SM00511 GeneTree:ENSGT00700000104130 CTD:23462
            eggNOG:NOG241271 HOGENOM:HOG000286035 KO:K09091 OMA:AHPDYSS
            OrthoDB:EOG4GB77H EMBL:AJ510221 EMBL:BC095317 IPI:IPI00484198
            RefSeq:NP_997726.1 UniGene:Dr.19915 ProteinModelPortal:Q8AXV6
            SMR:Q8AXV6 STRING:Q8AXV6 PRIDE:Q8AXV6 Ensembl:ENSDART00000103640
            GeneID:58008 KEGG:dre:58008 HOVERGEN:HBG094279 InParanoid:Q8AXV6
            NextBio:20891992 ArrayExpress:Q8AXV6 Bgee:Q8AXV6 Uniprot:Q8AXV6
        Length = 317

 Score = 121 (47.7 bits), Expect = 0.00014, P = 0.00014
 Identities = 36/104 (34%), Positives = 57/104 (54%)

Query:   262 SSNSIPPALKRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTV 321
             S+ S   A KR  + ++EKRRR RIN SL+ L+ L+  + + + +  +KLEKA+IL++TV
Sbjct:    41 STTSQVQARKR-RRGIIEKRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTV 97

Query:   322 RHLQRQKILSSD-------IRSKYKA-GYEECSREVSRFLETPE 357
              HL+               +   Y+  G+ EC  E +R+L   E
Sbjct:    98 DHLKMLHAAGGKGYFDAHALAMDYRGLGFRECLAETARYLSIIE 141


>UNIPROTKB|E2RRZ7 [details] [associations]
            symbol:HES7 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0048511 "rhythmic process" evidence=IEA]
            [GO:0036342 "post-anal tail morphogenesis" evidence=IEA]
            [GO:0007219 "Notch signaling pathway" evidence=IEA] [GO:0001756
            "somitogenesis" evidence=IEA] [GO:0001501 "skeletal system
            development" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0046983 "protein
            dimerization activity" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0005634
            GO:GO:0003677 GO:GO:0007219 GO:GO:0006351 GO:GO:0048511
            GO:GO:0000122 GO:GO:0001756 GO:GO:0001501 Gene3D:4.10.280.10
            SUPFAM:SSF47459 GeneTree:ENSGT00700000104130 OMA:LSGFREC
            EMBL:AAEX03003640 EMBL:AAEX03003639 Ensembl:ENSCAFT00000026848
            Uniprot:E2RRZ7
        Length = 228

 Score = 116 (45.9 bits), Expect = 0.00015, Sum P(2) = 0.00015
 Identities = 25/51 (49%), Positives = 38/51 (74%)

Query:   275 KPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQ 325
             KPL+EKRRR RIN+SL  L+ L+L+  + +N ++ KLE ++ILE  V +L+
Sbjct:    17 KPLVEKRRRDRINRSLEELRLLLLERTRDQNLRNPKLE-SEILEFAVGYLR 66

 Score = 38 (18.4 bits), Expect = 0.00015, Sum P(2) = 0.00015
 Identities = 8/25 (32%), Positives = 9/25 (36%)

Query:   556 PPPLSNLDQPLDFSIKRDDSMWRPW 580
             PPP    D           + WRPW
Sbjct:   203 PPPPHRQDGAPKAPPPPPPAFWRPW 227


>UNIPROTKB|E1C6T9 [details] [associations]
            symbol:LOC100858839 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0046983 "protein dimerization activity"
            evidence=IEA] [GO:2000820 "negative regulation of transcription
            from RNA polymerase II promoter involved in smooth muscle cell
            differentiation" evidence=IEA] [GO:2001212 "regulation of
            vasculogenesis" evidence=IEA] [GO:0000983 "RNA polymerase II core
            promoter sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0000988 "protein binding transcription
            factor activity" evidence=IEA] [GO:0001102 "RNA polymerase II
            activating transcription factor binding" evidence=IEA] [GO:0001570
            "vasculogenesis" evidence=IEA] [GO:0003150 "muscular septum
            morphogenesis" evidence=IEA] [GO:0003151 "outflow tract
            morphogenesis" evidence=IEA] [GO:0003171 "atrioventricular valve
            development" evidence=IEA] [GO:0003184 "pulmonary valve
            morphogenesis" evidence=IEA] [GO:0003195 "tricuspid valve
            formation" evidence=IEA] [GO:0003199 "endocardial cushion to
            mesenchymal transition involved in heart valve formation"
            evidence=IEA] [GO:0003214 "cardiac left ventricle morphogenesis"
            evidence=IEA] [GO:0003215 "cardiac right ventricle morphogenesis"
            evidence=IEA] [GO:0003222 "ventricular trabecula myocardium
            morphogenesis" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0007219 "Notch signaling pathway" evidence=IEA] [GO:0009948
            "anterior/posterior axis specification" evidence=IEA] [GO:0010460
            "positive regulation of heart rate" evidence=IEA] [GO:0010667
            "negative regulation of cardiac muscle cell apoptotic process"
            evidence=IEA] [GO:0014898 "cardiac muscle hypertrophy in response
            to stress" evidence=IEA] [GO:0016580 "Sin3 complex" evidence=IEA]
            [GO:0017053 "transcriptional repressor complex" evidence=IEA]
            [GO:0035910 "ascending aorta morphogenesis" evidence=IEA]
            [GO:0035912 "dorsal aorta morphogenesis" evidence=IEA] [GO:0035939
            "microsatellite binding" evidence=IEA] [GO:0036304 "umbilical cord
            morphogenesis" evidence=IEA] [GO:0042826 "histone deacetylase
            binding" evidence=IEA] [GO:0045165 "cell fate commitment"
            evidence=IEA] [GO:0045607 "regulation of auditory receptor cell
            differentiation" evidence=IEA] [GO:0045746 "negative regulation of
            Notch signaling pathway" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0055015 "ventricular cardiac muscle cell
            development" evidence=IEA] [GO:0060045 "positive regulation of
            cardiac muscle cell proliferation" evidence=IEA] [GO:0060347 "heart
            trabecula formation" evidence=IEA] [GO:0060413 "atrial septum
            morphogenesis" evidence=IEA] [GO:0060633 "negative regulation of
            transcription initiation from RNA polymerase II promoter"
            evidence=IEA] [GO:0060716 "labyrinthine layer blood vessel
            development" evidence=IEA] [GO:0060842 "arterial endothelial cell
            differentiation" evidence=IEA] [GO:0060948 "cardiac vascular smooth
            muscle cell development" evidence=IEA] [GO:0060977 "coronary
            vasculature morphogenesis" evidence=IEA] [GO:0061156 "pulmonary
            artery morphogenesis" evidence=IEA] [GO:0065004 "protein-DNA
            complex assembly" evidence=IEA] [GO:0090102 "cochlea development"
            evidence=IEA] [GO:2000678 "negative regulation of transcription
            regulatory region DNA binding" evidence=IEA] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 GO:GO:0005737 GO:GO:0017053
            GO:GO:0043565 GO:GO:0007219 GO:GO:0000122 GO:GO:0010460
            Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0000983 GO:GO:0045165
            InterPro:IPR018352 SMART:SM00511 GO:GO:0060045 GO:GO:0045746
            GO:GO:0060633 GO:GO:0016580 GeneTree:ENSGT00700000104130
            GO:GO:0065004 GO:GO:0010667 OMA:TCASQRE EMBL:AADN02001790
            IPI:IPI00582267 Ensembl:ENSGALT00000023951 NextBio:20824448
            Uniprot:E1C6T9
        Length = 335

 Score = 123 (48.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
 Identities = 33/95 (34%), Positives = 55/95 (57%)

Query:   271 KRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQRQKIL 330
             ++  + ++EKRRR RIN SL+ L+ L+  + + + +  +KLEKA+IL++TV HL+  +  
Sbjct:    49 RKKRRGIIEKRRRDRINNSLSELRRLVPTAFEKQGS--AKLEKAEILQMTVDHLKMLQAT 106

Query:   331 SS----DIRSK----YKAGYEECSREVSRFLETPE 357
                   D  S        G+ EC  EV+R+L + E
Sbjct:   107 GGKGYFDAHSLAMDFMSIGFRECLTEVARYLTSVE 141

 Score = 37 (18.1 bits), Expect = 0.00019, Sum P(2) = 0.00019
 Identities = 7/15 (46%), Positives = 9/15 (60%)

Query:   407 VRQRLFRHLENCMSE 421
             +R RL  HL  C S+
Sbjct:   149 LRVRLVSHLSTCASQ 163


>MGI|MGI:3040955 [details] [associations]
            symbol:Helt "helt bHLH transcription factor" species:10090
            "Mus musculus" [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IDA] [GO:0001967
            "suckling behavior" evidence=IMP] [GO:0003677 "DNA binding"
            evidence=IDA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IDA] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005667 "transcription factor complex" evidence=IDA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0007399 "nervous system development"
            evidence=IEA] [GO:0007417 "central nervous system development"
            evidence=IMP] [GO:0009791 "post-embryonic development"
            evidence=IMP] [GO:0010259 "multicellular organismal aging"
            evidence=IMP] [GO:0010467 "gene expression" evidence=IMP]
            [GO:0021858 "GABAergic neuron differentiation in basal ganglia"
            evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
            [GO:0030182 "neuron differentiation" evidence=IGI] [GO:0035264
            "multicellular organism growth" evidence=IMP] [GO:0042803 "protein
            homodimerization activity" evidence=IDA] [GO:0046983 "protein
            dimerization activity" evidence=IEA] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 MGI:MGI:3040955 GO:GO:0010467
            GO:GO:0042803 GO:GO:0003677 GO:GO:0001967 GO:GO:0007417
            GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0000122
            GO:GO:0009791 GO:GO:0035264 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GO:GO:0010259 GeneTree:ENSGT00700000104168 CTD:391723
            eggNOG:NOG330980 HOGENOM:HOG000082510 HOVERGEN:HBG054492
            OMA:PVSHKVI OrthoDB:EOG46144W GO:GO:0021858 EMBL:AB120968
            EMBL:AB098077 EMBL:DQ294234 EMBL:BC103599 EMBL:BC103600
            EMBL:BC103601 IPI:IPI00330943 RefSeq:NP_776150.2 UniGene:Mm.145631
            ProteinModelPortal:Q7TS99 SMR:Q7TS99 STRING:Q7TS99
            PhosphoSite:Q7TS99 PRIDE:Q7TS99 Ensembl:ENSMUST00000058636
            GeneID:234219 KEGG:mmu:234219 UCSC:uc009lqb.1 InParanoid:Q7TS99
            NextBio:382069 Bgee:Q7TS99 Genevestigator:Q7TS99 Uniprot:Q7TS99
        Length = 240

 Score = 114 (45.2 bits), Expect = 0.00044, P = 0.00044
 Identities = 34/92 (36%), Positives = 53/92 (57%)

Query:   277 LMEKRRRARINQSLALL-KALILDSAKTENTKHSKLEKADILELTVRHLQ---------- 325
             ++EKRRR RIN+ L  L K + +  AK  +    KLEKA+ILE+TV++L+          
Sbjct:    17 VIEKRRRDRINRCLNELGKTVPMALAKQSS---GKLEKAEILEMTVQYLRALHSADFPRG 73

Query:   326 RQKILSSDIRSKYKAGYEECSREVSRFLETPE 357
             R+K L ++  + +  GY EC + +  +L T E
Sbjct:    74 REKELLAEFANYFHYGYHECMKNLVHYLTTVE 105


>RGD|1564073 [details] [associations]
            symbol:Helt "helt bHLH transcription factor" species:10116
            "Rattus norvegicus" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA;ISO]
            [GO:0001967 "suckling behavior" evidence=IEA;ISO] [GO:0003677 "DNA
            binding" evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA;ISO]
            [GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription
            factor complex" evidence=IEA;ISO] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0007417 "central nervous system
            development" evidence=IEA;ISO] [GO:0009791 "post-embryonic
            development" evidence=IEA;ISO] [GO:0010259 "multicellular
            organismal aging" evidence=IEA;ISO] [GO:0010467 "gene expression"
            evidence=ISO] [GO:0021858 "GABAergic neuron differentiation in
            basal ganglia" evidence=IEA;ISO] [GO:0030182 "neuron
            differentiation" evidence=ISO] [GO:0035264 "multicellular organism
            growth" evidence=IEA;ISO] [GO:0042803 "protein homodimerization
            activity" evidence=IEA;ISO] InterPro:IPR003650 InterPro:IPR011598
            Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054
            SMART:SM00353 RGD:1564073 GO:GO:0003677 GO:GO:0001967 GO:GO:0007417
            GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0000122
            GO:GO:0009791 GO:GO:0035264 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GO:GO:0010259 GeneTree:ENSGT00700000104168 OMA:PVSHKVI
            OrthoDB:EOG46144W GO:GO:0021858 IPI:IPI00209585
            RefSeq:XP_003751648.1 RefSeq:XP_003752951.1
            Ensembl:ENSRNOT00000014360 GeneID:498633 KEGG:rno:498633 CTD:498633
            Uniprot:D4ADJ5
        Length = 240

 Score = 114 (45.2 bits), Expect = 0.00044, P = 0.00044
 Identities = 34/92 (36%), Positives = 53/92 (57%)

Query:   277 LMEKRRRARINQSLALL-KALILDSAKTENTKHSKLEKADILELTVRHLQ---------- 325
             ++EKRRR RIN+ L  L K + +  AK  +    KLEKA+ILE+TV++L+          
Sbjct:    17 VIEKRRRDRINRCLNELGKTVPMALAKQSS---GKLEKAEILEMTVQYLRALHSADFPRG 73

Query:   326 RQKILSSDIRSKYKAGYEECSREVSRFLETPE 357
             R+K L ++  + +  GY EC + +  +L T E
Sbjct:    74 REKELLAEFANYFHYGYHECMKNLVHYLTTVE 105


>UNIPROTKB|J9P200 [details] [associations]
            symbol:HELT "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 GO:GO:0005634 GO:GO:0006355
            GO:GO:0003677 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GeneTree:ENSGT00700000104168 OMA:PVSHKVI EMBL:AAEX03010501
            Ensembl:ENSCAFT00000043273 Uniprot:J9P200
        Length = 241

 Score = 114 (45.2 bits), Expect = 0.00044, P = 0.00044
 Identities = 34/92 (36%), Positives = 53/92 (57%)

Query:   277 LMEKRRRARINQSLALL-KALILDSAKTENTKHSKLEKADILELTVRHLQ---------- 325
             ++EKRRR RIN+ L  L K + +  AK  +    KLEKA+ILE+TV++L+          
Sbjct:    17 VIEKRRRDRINRCLNELGKTVPMALAKQSS---GKLEKAEILEMTVQYLRALHSAHFPRG 73

Query:   326 RQKILSSDIRSKYKAGYEECSREVSRFLETPE 357
             R+K L ++  + +  GY EC + +  +L T E
Sbjct:    74 REKELLAEFANYFHYGYHECMKNLVHYLTTVE 105


>UNIPROTKB|E2R9I1 [details] [associations]
            symbol:PABPC4 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0046983 "protein dimerization activity"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR002004 InterPro:IPR006515 InterPro:IPR011598
            InterPro:IPR012677 Pfam:PF00010 Pfam:PF00076 Pfam:PF00658
            PROSITE:PS50102 PROSITE:PS50888 PROSITE:PS51309 SMART:SM00353
            SMART:SM00360 SMART:SM00517 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003723 Gene3D:4.10.280.10 SUPFAM:SSF47459
            Gene3D:1.10.1900.10 SUPFAM:SSF63570 TIGRFAMs:TIGR01628
            GeneTree:ENSGT00640000091232 EMBL:AAEX03009572
            Ensembl:ENSCAFT00000004949 Uniprot:E2R9I1
        Length = 700

 Score = 121 (47.7 bits), Expect = 0.00048, P = 0.00048
 Identities = 34/98 (34%), Positives = 55/98 (56%)

Query:   229 KPRSTVKKDTHSP-PLKRSLNKTLVVMSSPPLVASSNSIPPALKRANKPLMEKRRRARIN 287
             +PR     D+ S  P+       L  M+ P    S + +    KR  + ++EKRRR RIN
Sbjct:     3 RPREPSGSDSESDGPIDVGREGELSQMARPLSTPSPSQMQARKKR--RGIIEKRRRDRIN 60

Query:   288 QSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQ 325
              SL+ L+ L+  + + + +  SKLEKA++L++TV HL+
Sbjct:    61 SSLSELRRLVPTAFEKQGS--SKLEKAEVLQMTVDHLK 96


>FB|FBgn0002631 [details] [associations]
            symbol:E(spl)m5-HLH "Enhancer of split m5, helix-loop-helix"
            species:7227 "Drosophila melanogaster" [GO:0046982 "protein
            heterodimerization activity" evidence=IPI] [GO:0005634 "nucleus"
            evidence=NAS;IDA] [GO:0001078 "RNA polymerase II core promoter
            proximal region sequence-specific DNA binding transcription factor
            activity involved in negative regulation of transcription"
            evidence=IDA] [GO:0042803 "protein homodimerization activity"
            evidence=IPI] [GO:0043565 "sequence-specific DNA binding"
            evidence=IDA] [GO:0007399 "nervous system development"
            evidence=NAS] [GO:0003677 "DNA binding" evidence=NAS] [GO:0045165
            "cell fate commitment" evidence=NAS] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=NAS]
            [GO:0048749 "compound eye development" evidence=TAS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=TAS] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] InterPro:IPR003650 InterPro:IPR011598
            Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054
            SMART:SM00353 EMBL:AE014297 GO:GO:0005634 GO:GO:0007399
            GO:GO:0030154 GO:GO:0001078 GO:GO:0043565 Gene3D:4.10.280.10
            SUPFAM:SSF47459 GO:GO:0048749 InterPro:IPR018352 SMART:SM00511
            GeneTree:ENSGT00700000104130 KO:K09090 EMBL:AY779906 EMBL:AY779907
            EMBL:AY779908 EMBL:AY779909 EMBL:AY779910 EMBL:AY779911
            EMBL:AY779912 EMBL:AY779913 EMBL:AY779914 EMBL:AY779915
            EMBL:AY779916 EMBL:AY779917 EMBL:AY779918 EMBL:AY779919
            EMBL:AY779920 EMBL:AY779921 EMBL:X16552 EMBL:AY070597 EMBL:AY906443
            EMBL:AY906444 EMBL:AY906445 EMBL:AY906446 EMBL:AY906447
            EMBL:AY906448 EMBL:AY906449 EMBL:AY906450 EMBL:AY906451
            EMBL:AY906452 EMBL:AY906453 EMBL:AY906454 EMBL:AY906455
            EMBL:AY906456 EMBL:AY906457 EMBL:AY906458 EMBL:AY906459
            EMBL:AY906460 EMBL:AY906461 EMBL:AY906462 EMBL:AY906463
            EMBL:AY906464 EMBL:AY906465 EMBL:AY906466 EMBL:AY906467
            EMBL:AY906468 EMBL:AY906469 EMBL:AY906470 EMBL:AY906471
            EMBL:AY906472 EMBL:AY906473 EMBL:AY906474 EMBL:AY906475
            EMBL:AY906476 EMBL:AY906477 EMBL:AY906478 EMBL:AY906479
            EMBL:AY906480 EMBL:AY906481 EMBL:AY906482 EMBL:AY906483
            EMBL:AY906484 EMBL:AY906485 EMBL:AY906486 EMBL:AY906487
            EMBL:AY906488 EMBL:AY906489 EMBL:AY906490 EMBL:AY906491
            EMBL:AY906492 EMBL:AY906493 EMBL:AY906494 EMBL:AY906495
            EMBL:AY906496 EMBL:AY906497 EMBL:AY906498 EMBL:AY906499
            EMBL:AY906500 EMBL:AY906501 EMBL:AY906502 EMBL:AY906503
            EMBL:AY906504 EMBL:AY906505 EMBL:AY906506 EMBL:AY906507
            EMBL:AY906508 EMBL:AY906509 EMBL:AY906510 EMBL:AY906511
            EMBL:AY906512 EMBL:AY906513 EMBL:AY906514 EMBL:AY906515
            EMBL:AY906516 EMBL:AY906517 EMBL:AY906518 EMBL:AY906519
            EMBL:AY906520 EMBL:AY906521 EMBL:AY906522 EMBL:AY906523
            EMBL:AY906524 EMBL:AY906525 EMBL:AY906526 EMBL:AY906527
            EMBL:AY906528 EMBL:AY906529 EMBL:AY906530 EMBL:AY906531
            EMBL:AY906532 EMBL:AY906533 EMBL:AY906534 EMBL:AY906535
            EMBL:AY906536 EMBL:AY906537 EMBL:AY906538 EMBL:AY906539
            EMBL:AY906540 EMBL:AY906541 EMBL:AY906542 EMBL:AY906543
            EMBL:AY906544 EMBL:AY906545 EMBL:AY906546 EMBL:AY906547
            EMBL:AY906548 EMBL:AY906549 EMBL:AY906550 EMBL:AY906551
            EMBL:AY906552 EMBL:AY906553 EMBL:AY906554 EMBL:AY906555
            EMBL:AY906556 EMBL:AY906557 EMBL:AY906558 EMBL:AY906559
            EMBL:AY906560 EMBL:AY906561 EMBL:AY906562 EMBL:AY906563
            EMBL:AY906564 EMBL:AY906565 EMBL:AY906566 EMBL:AY906567
            EMBL:AY906568 EMBL:AY906569 EMBL:AY906570 EMBL:AY906571
            EMBL:AY906572 EMBL:AY906573 EMBL:AY906574 EMBL:AY906575
            EMBL:AY906576 EMBL:AY906577 EMBL:AY906578 EMBL:AY906579
            EMBL:AY906580 EMBL:AY906581 EMBL:AY906582 EMBL:AY906583
            EMBL:AY906584 EMBL:AY906585 EMBL:AY906586 EMBL:AY906587
            EMBL:AY906588 EMBL:AY906589 EMBL:AY906590 EMBL:AY906591
            EMBL:AY906592 EMBL:AY906593 EMBL:AY906594 EMBL:AY906595
            EMBL:AY906596 EMBL:AY906597 EMBL:AY906598 EMBL:AY906599
            EMBL:AY906600 EMBL:AY906601 EMBL:AY906602 EMBL:AY906603
            EMBL:AY906604 EMBL:AY906605 EMBL:AY906606 EMBL:AY906607
            EMBL:AY906608 EMBL:AY906609 EMBL:AY906610 EMBL:AY906611
            EMBL:AY906612 EMBL:AY906613 EMBL:AY906614 EMBL:AY906615
            EMBL:AY906616 EMBL:AY906617 EMBL:AY906618 EMBL:AY906619
            EMBL:AY906620 EMBL:AY906621 EMBL:AY906622 EMBL:AY906623
            EMBL:AY906624 EMBL:AY906625 EMBL:AY906626 EMBL:AY906627
            EMBL:AY906628 EMBL:AY906629 EMBL:AY906630 EMBL:AY906631
            EMBL:AY906632 EMBL:AY906633 EMBL:AY906634 EMBL:AY906635
            EMBL:AY906636 EMBL:AY906637 EMBL:AY906638 EMBL:AY906639
            EMBL:AY906640 EMBL:AY906641 EMBL:AY906642 EMBL:AY906643
            EMBL:AY906644 EMBL:AY906645 EMBL:AY906646 EMBL:AY906647
            EMBL:AY906648 EMBL:AY906649 EMBL:AY906650 EMBL:AY906651
            EMBL:AY906652 EMBL:AY906653 EMBL:AY906654 EMBL:AY906655
            EMBL:AY906656 EMBL:AY906657 EMBL:AY906658 EMBL:AY906659
            EMBL:AY906660 EMBL:AY906661 EMBL:AY906662 EMBL:AY906663
            EMBL:AY906664 EMBL:AY906665 EMBL:AY906666 EMBL:AY906667
            EMBL:AY906668 EMBL:AY906669 EMBL:AY906670 EMBL:AY906671
            EMBL:AY906672 EMBL:AY906673 EMBL:AY906674 EMBL:AY906675
            EMBL:AY906676 EMBL:AY906677 EMBL:AY906678 EMBL:AY906679
            EMBL:AY906680 EMBL:AY906681 EMBL:AY906682 EMBL:AY906683
            EMBL:AY906684 EMBL:AY906685 EMBL:AY906686 EMBL:AY906687
            EMBL:AY906688 EMBL:AY906689 EMBL:AY906690 EMBL:AY906691
            EMBL:AY906692 EMBL:AY906693 EMBL:AY906694 EMBL:AY906695
            EMBL:AY906696 EMBL:AY906697 EMBL:AY906698 EMBL:AY906699
            EMBL:AY906700 EMBL:AY906701 EMBL:AY906702 EMBL:AY906703
            EMBL:AY906704 EMBL:AY906705 EMBL:AY906706 EMBL:AY906707
            EMBL:AY906708 EMBL:AY906709 EMBL:AY906711 EMBL:AY906712
            EMBL:AY906713 EMBL:AY906714 EMBL:AY906715 EMBL:AY906716
            EMBL:AY906717 EMBL:AY906718 EMBL:AY906719 EMBL:AY906720
            EMBL:AY906721 EMBL:AY906722 EMBL:AY906723 EMBL:AY906724
            EMBL:AY906725 EMBL:AY906726 EMBL:AY906727 EMBL:AY906728
            EMBL:AY906729 EMBL:AY906730 EMBL:AY906731 EMBL:AY906732
            EMBL:AY906733 EMBL:AY906734 EMBL:AY906735 EMBL:AY906736
            EMBL:AY906737 EMBL:AY906738 EMBL:AY906739 EMBL:AY906740
            EMBL:AY906741 EMBL:AY906742 EMBL:AY906743 EMBL:AY906745
            EMBL:AY906746 EMBL:AY906747 EMBL:AY906748 EMBL:AY906749
            EMBL:AY906750 EMBL:AY906751 EMBL:AY906752 EMBL:AY906753
            EMBL:AY906754 EMBL:AY906755 EMBL:AY906756 EMBL:AY906757
            EMBL:AY906758 EMBL:AY906759 EMBL:AY906760 EMBL:AY906761
            EMBL:AY906762 EMBL:AY906763 EMBL:AY906764 EMBL:AY906765
            EMBL:AY906766 EMBL:AY906767 EMBL:AY906768 EMBL:AY906769
            EMBL:AY906770 EMBL:AY906771 EMBL:AY906772 EMBL:AY906773
            EMBL:AY906774 EMBL:AY906775 PIR:S03629 RefSeq:NP_524511.1
            UniGene:Dm.2352 ProteinModelPortal:P13096 SMR:P13096 DIP:DIP-627N
            IntAct:P13096 MINT:MINT-188710 STRING:P13096 PRIDE:P13096
            EnsemblMetazoa:FBtr0084979 GeneID:43158 KEGG:dme:Dmel_CG6096
            CTD:43158 FlyBase:FBgn0002631 eggNOG:NOG289048 InParanoid:Q56KH0
            OMA:MNAVSEI OrthoDB:EOG459ZXQ PhylomeDB:P13096 ChiTaRS:HLHm5
            GenomeRNAi:43158 NextBio:832467 Bgee:P13096 GermOnline:CG6096
            Uniprot:P13096
        Length = 178

 Score = 100 (40.3 bits), Expect = 0.00069, Sum P(2) = 0.00069
 Identities = 27/93 (29%), Positives = 51/93 (54%)

Query:   272 RANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQRQKI-- 329
             +  KPL+E++RRAR+N+ L  LK L+ +    +     +++KA++LE  +  +++Q +  
Sbjct:    20 KVKKPLLERQRRARMNKCLDTLKTLVAEFQGDDAIL--RMDKAEMLEAALVFMRKQVVKQ 77

Query:   330 ---LSSDIRSKYKAGYEECSREVSRFLE-TPEL 358
                +S      +K GY     E+SR +  TP +
Sbjct:    78 QAPVSPLPMDSFKNGYMNAVSEISRVMACTPAM 110

 Score = 44 (20.5 bits), Expect = 0.00069, Sum P(2) = 0.00069
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query:   573 DDSMWRPW 580
             +++MWRPW
Sbjct:   171 EETMWRPW 178


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.314   0.132   0.383    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      580       434   0.00087  118 3  11 23  0.45    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  139
  No. of states in DFA:  609 (65 KB)
  Total size of DFA:  240 KB (2128 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:05
  No. of threads or processors used:  24
  Search cpu time:  36.65u 0.08s 36.73t   Elapsed:  00:00:18
  Total cpu time:  36.68u 0.08s 36.76t   Elapsed:  00:00:23
  Start:  Thu Aug 15 14:35:06 2013   End:  Thu Aug 15 14:35:29 2013
WARNINGS ISSUED:  1

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