Diaphorina citri psyllid: psy13711

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580
MFLRQATHYQVDLTGGPDSLITDEHTHYQVDLTGGPDQVYLIVSDWSKGFPLCPPQVSRFLETPELHLGLSSTTSSTPTPSGTGNKALPLPSKPTPSSLALASLMSGEPVIDSGVRQRLFRHLENCMSEIDLDFSASAEKLGITQDFSSEDDSAFPMLRVRPEPDSSTTTLLPVTHPTPTKPNVTPPKKKSKTKMATQQSLIMSTTSEHSGDGNNNIGTPDSSTGCQTKPRSTVKKDTHSPPLKRSLNKTLVVMSSPPLVASSNSIPPALKRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQRQKILSSDIRSKYKAGYEECSREVSRFLETPELHLGLSSTTSSTPTPSGTGNKALPLPSKPTPSSLALASLMSGEPVIDSGVRQRLFRHLENCMSEIDLDFSASAEKLGITQDFSSEDDSAFPMLRVRPEPDSSTTTLLPVTHPTPTKPNVTPPKKKSKTKMASVGGGGEKTASDISDSNSNQSSSAVESAMSVLQLIPSRLPDGQVVFILPNYMAPSTSPPCKDDLKSSPPPLSNLDQPLDFSIKRDDSMWRPW
cccccccEEEEEccccccccccccccCEEEEccccccEEEEEEcccccccccccHHHHHccccccccccccccccccccccccccccccccccccccHHHHHccccccccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEccccccccccccccccccccccccccccccccccccccccccccc
*******HYQVDLTGGPDSLITDEHTHYQVDLTGGPDQVYLIVSDWSKGFPLCPPQVSRFLETPELHLG*****************************************IDSGVRQRLFRHLENCMSEIDLDFSASA************************************************************************************************************************************************RARINQSLALLKALILDSA************ADILELTVRHLQRQKILSSDIRSKYKAGYEECSREVSRFLET***********************************************IDSGVRQRLFRHLENCMSEIDL**********************************************************************************************VLQLIPSRLPDGQVVFILPNYM**********************************SMWRPW
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MFLRQATHYQVDLTGGPDSLITDEHTHYQVDLTGGPDQVYLIVSDWSKGFPLCPPQVSRFLETPELHLGLSSTTSSTPTPSGTGNKALPLPSKPTPSSLALASLMSGEPVIDSGVRQRLFRHLENCMSEIDLDFSASAEKLGITQDFSSEDDSAFPMLRVRPEPDSSTTTLLPVTHPTPTKPNVTPPKKKSKTKMATQQSLIMSTTSEHSGDGNNNIGTPDSSTGCQTKPRSTVKKDTHSPPLKRSLNKTLVVMSSPPLVASSNSIPPALKRANKPLMEKRRRARINQSLALLKALILDSAKTENTKHSKLEKADILELTVRHLQRQKILSSDIRSKYKAGYEECSREVSRFLETPELHLGLSSTTSSTPTPSGTGNKALPLPSKPTPSSLALASLMSGEPVIDSGVRQRLFRHLENCMSEIDLDFSASAEKLGITQDFSSEDDSAFPMLRVRPEPDSSTTTLLPVTHPTPTKPNVTPPKKKSKTKMASVGGGGEKTASDISDSNSNQSSSAVESAMSVLQLIPSRLPDGQVVFILPNYMAPSTSPPCKDDLKSSPPPLSNLDQPLDFSIKRDDSMWRPW

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0043565 [MF]sequence-specific DNA bindingprobableGO:0097159, GO:0003674, GO:0005488, GO:0003676, GO:0003677, GO:1901363
GO:0048523 [BP]negative regulation of cellular processprobableGO:0008150, GO:0048519, GO:0065007, GO:0050789, GO:0050794
GO:0007417 [BP]central nervous system developmentprobableGO:0032502, GO:0032501, GO:0044707, GO:0007399, GO:0048856, GO:0008150, GO:0048731, GO:0007275, GO:0044699
GO:0048513 [BP]organ developmentprobableGO:0032502, GO:0032501, GO:0044707, GO:0048856, GO:0008150, GO:0048731, GO:0007275, GO:0044699
GO:0003690 [MF]double-stranded DNA bindingprobableGO:0043566, GO:0097159, GO:0003674, GO:0005488, GO:0003676, GO:0003677, GO:1901363
GO:0001078 [MF]RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcriptionprobableGO:0001227, GO:0003700, GO:0003674, GO:0001071, GO:0000982, GO:0000981

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1A0A, chain A
Confidence level:confident
Coverage over the Query: 271-329
View the alignment between query and template
View the model in PyMOL
Template: 2DB7, chain A
Confidence level:confident
Coverage over the Query: 337-358,403-422
View the alignment between query and template
View the model in PyMOL
Template: 2DB7, chain A
Confidence level:probable
Coverage over the Query: 45-65,110-130
View the alignment between query and template
View the model in PyMOL