BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13718
(165 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|296199503|ref|XP_002747175.1| PREDICTED: dimethyladenosine transferase 1, mitochondrial
[Callithrix jacchus]
Length = 343
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/141 (51%), Positives = 98/141 (69%), Gaps = 1/141 (0%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ AT G +QR RLS+M Q CNV H FTIPG+AF+PKP+VDVGVVHFTP +HP I PFK
Sbjct: 184 LAATTGSKQRSRLSVMAQYLCNVRHIFTIPGRAFVPKPEVDVGVVHFTPLIHPKIQQPFK 243
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKR-QLVVSLLERACVKPILRPYQLSVQEFGQI 119
L+E+VV +F++R+K ++ +LFP+ +R + LLE A V P LRP QLS+ +F +
Sbjct: 244 LVEKVVQNVFQFRRKYCHRGLGMLFPEAQRLESTGRLLELADVDPTLRPRQLSIPQFKSL 303
Query: 120 CLAYRDMCEEMPGLYEYTLED 140
C YR MC+E P L+ Y +
Sbjct: 304 CDVYRRMCDEDPHLFAYNFRE 324
>gi|355723907|gb|AES08046.1| transcription factor B1, mitochondrial [Mustela putorius furo]
Length = 347
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 103/160 (64%), Gaps = 4/160 (2%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G +QR RLSIM Q CNV H FTIPG+AF+PKP+VDVGVVHFTP V P I+ PFK
Sbjct: 190 LTANTGSKQRSRLSIMAQYLCNVQHIFTIPGQAFVPKPEVDVGVVHFTPLVQPRIEQPFK 249
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKR-QLVVSLLERACVKPILRPYQLSVQEFGQI 119
L+E+VV F++R+K Y+ +LFP+ +R + LLE A V P LRP QLSV F +
Sbjct: 250 LVEKVVQNAFQFRRKYCYRGLGMLFPEVERVESTGKLLELADVDPTLRPTQLSVSHFKSL 309
Query: 120 CLAYRDMCEEMPGLYEYTLEDTPGDIEPEAVAEQEGEGDE 159
C YR MC+E P L+ Y + +++ QE E D+
Sbjct: 310 CDVYRKMCDEDPLLFAYNFRE---ELKQNKSKNQEKEDDK 346
>gi|410960296|ref|XP_003986729.1| PREDICTED: mitochondrial dimethyladenosine transferase 1-like
[Felis catus]
Length = 345
Score = 151 bits (382), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 77/160 (48%), Positives = 102/160 (63%), Gaps = 4/160 (2%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A+ G +QR RLS+M Q CNV H TIPG+AF+PKP+VDVGVVHFTP P I+ PFK
Sbjct: 184 LTASTGSKQRSRLSVMAQYLCNVQHILTIPGRAFVPKPEVDVGVVHFTPLTRPRIEQPFK 243
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKR-QLVVSLLERACVKPILRPYQLSVQEFGQI 119
L+ERVV F++R+K Y+ +LFP+ +R + LLE A V P LRP QLSV F +
Sbjct: 244 LVERVVQNAFQFRRKYCYRGLGMLFPEVQRVESTEKLLELADVDPTLRPSQLSVSHFKSL 303
Query: 120 CLAYRDMCEEMPGLYEYTLEDTPGDIEPEAVAEQEGEGDE 159
C YR MC+E P L+ Y + +++ QE E D+
Sbjct: 304 CDVYRKMCDEDPHLFTYNFRE---ELKQNKSKNQERENDK 340
>gi|403284933|ref|XP_003933802.1| PREDICTED: dimethyladenosine transferase 1, mitochondrial isoform 1
[Saimiri boliviensis boliviensis]
gi|403284935|ref|XP_003933803.1| PREDICTED: dimethyladenosine transferase 1, mitochondrial isoform 2
[Saimiri boliviensis boliviensis]
Length = 345
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/160 (48%), Positives = 106/160 (66%), Gaps = 2/160 (1%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ AT G +QR RLSIM Q CNV H FTIPG+AF+PKP+VDVGVVHFTP + P I+ PFK
Sbjct: 184 LAATTGSKQRSRLSIMAQYLCNVRHIFTIPGRAFVPKPEVDVGVVHFTPLIQPKIEQPFK 243
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKR-QLVVSLLERACVKPILRPYQLSVQEFGQI 119
L+E+VV +F++R+K ++ +LFP+ +R + LLE A V P LRP QLS+ +F +
Sbjct: 244 LVEKVVQNVFQFRRKYCHRGLGMLFPEAQRLESTGRLLELADVDPTLRPRQLSIPQFKSL 303
Query: 120 CLAYRDMCEEMPGLYEYTLEDTPGDIEPEAVAEQEGEGDE 159
C YR MC+E P L+ Y + + E E+E +G+
Sbjct: 304 CDVYRRMCDEDPHLFAYNFREELKQRKSEK-KEKEDDGES 342
>gi|354466970|ref|XP_003495944.1| PREDICTED: dimethyladenosine transferase 1, mitochondrial-like,
partial [Cricetulus griseus]
Length = 329
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/141 (51%), Positives = 97/141 (68%), Gaps = 1/141 (0%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++AT G +QR RLSIM Q CNV+H FTIPGKAF+PKP+VDVGVVHFTP + P I+ PFK
Sbjct: 169 LVATTGSKQRSRLSIMAQYLCNVEHLFTIPGKAFVPKPEVDVGVVHFTPLIQPKIEQPFK 228
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKR-QLVVSLLERACVKPILRPYQLSVQEFGQI 119
L+E+VV F++R+K ++ +LFPK +R + LL+ A + P LRP LS+ F +
Sbjct: 229 LVEKVVQYAFQFRRKYCHQGLGMLFPKAQRLENTGKLLQLADIDPTLRPIHLSLMHFKSL 288
Query: 120 CLAYRDMCEEMPGLYEYTLED 140
C YR MC+E P L+ Y +
Sbjct: 289 CDVYRKMCDEDPQLFTYNFRE 309
>gi|73946166|ref|XP_533459.2| PREDICTED: dimethyladenosine transferase 1, mitochondrial [Canis
lupus familiaris]
Length = 345
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/160 (48%), Positives = 101/160 (63%), Gaps = 4/160 (2%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G +QR RLSIM Q CNV H TIPG+AF+PKP+VDVGVVHFTP V P I+ PFK
Sbjct: 184 LTANTGSKQRSRLSIMAQYLCNVQHILTIPGQAFVPKPEVDVGVVHFTPLVRPRIEQPFK 243
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKR-QLVVSLLERACVKPILRPYQLSVQEFGQI 119
L+E+VV F++R+K Y+ +LFP+ R + LLE A V P LRP QLSV F +
Sbjct: 244 LVEKVVQNTFQFRRKYCYRGLGMLFPQIHRVESTGKLLELADVDPTLRPSQLSVSHFKSL 303
Query: 120 CLAYRDMCEEMPGLYEYTLEDTPGDIEPEAVAEQEGEGDE 159
C YR MC+E P L+ Y + +++ QE E D+
Sbjct: 304 CDVYRKMCDEDPHLFAYNFRE---ELKQNKSKNQEKEDDK 340
>gi|190360597|ref|NP_001121947.1| dimethyladenosine transferase 1, mitochondrial [Sus scrofa]
gi|186886356|gb|ACC93577.1| CGI-75 protein [Sus scrofa]
Length = 340
Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/141 (51%), Positives = 95/141 (67%), Gaps = 1/141 (0%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+IA++G +QR RLSIM Q C V H TIPG+AF+PKP+VDVGVVHFTP P I+ PFK
Sbjct: 184 LIASKGSKQRSRLSIMAQYLCGVQHVLTIPGRAFVPKPEVDVGVVHFTPLTQPKIEQPFK 243
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKR-QLVVSLLERACVKPILRPYQLSVQEFGQI 119
L+E+VV F++R+K Y+ +LFP+ +R + LLE A V P LRP QLSV F +
Sbjct: 244 LVEKVVQNAFQFRRKYCYRGLGMLFPEAQRMERTGKLLESADVDPTLRPTQLSVSHFQSL 303
Query: 120 CLAYRDMCEEMPGLYEYTLED 140
C YR MC+E P L+ Y +
Sbjct: 304 CDVYRKMCDEDPHLFAYNFRE 324
>gi|441602135|ref|XP_004087716.1| PREDICTED: LOW QUALITY PROTEIN: dimethyladenosine transferase 1,
mitochondrial [Nomascus leucogenys]
Length = 347
Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 72/141 (51%), Positives = 96/141 (68%), Gaps = 1/141 (0%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G +QR RLS+M Q CNV H FTIPG+AF+PKP+VDVGVVHFTP V P I+ PFK
Sbjct: 184 LAANTGSKQRSRLSVMAQYLCNVRHIFTIPGQAFVPKPEVDVGVVHFTPLVQPKIEQPFK 243
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKR-QLVVSLLERACVKPILRPYQLSVQEFGQI 119
L+E+VV +F++R+K ++ +LFP+ +R + LLE A V P LRP QLS+ F +
Sbjct: 244 LVEKVVQNVFQFRRKYCHRGLGMLFPEAQRLESTGRLLELADVDPTLRPSQLSISHFKSL 303
Query: 120 CLAYRDMCEEMPGLYEYTLED 140
C YR MC+E P L+ Y +
Sbjct: 304 CDVYRKMCDEDPQLFAYNFRE 324
>gi|81871169|sp|Q811P6.1|TFB1M_RAT RecName: Full=Dimethyladenosine transferase 1, mitochondrial;
AltName: Full=Mitochondrial 12S rRNA dimethylase 1;
AltName: Full=Mitochondrial transcription factor B1;
Short=mtTFB1; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase 1; Flags:
Precursor
gi|28569596|gb|AAO42744.1| mitochondrial transcription factor b1 [Rattus norvegicus]
Length = 345
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 74/160 (46%), Positives = 104/160 (65%), Gaps = 4/160 (2%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++AT G +QR RLSIM Q CNV+H FTIPGKAF+PKP+VDVGVVH P V P I PFK
Sbjct: 184 LVATTGSKQRSRLSIMAQYLCNVEHLFTIPGKAFVPKPEVDVGVVHLMPLVQPKIKQPFK 243
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKR-QLVVSLLERACVKPILRPYQLSVQEFGQI 119
L+E+VV +F++R+K ++ +LFP+ +R + LL+ A + P LRP LS+ F +
Sbjct: 244 LVEKVVQNVFQFRRKYCHRGLGMLFPEAQRLESTGRLLQLADIDPTLRPTHLSLMHFKSL 303
Query: 120 CLAYRDMCEEMPGLYEYTLEDTPGDIEPEAVAEQEGEGDE 159
C YR MC+E P L+ Y + +++ + QE +GD
Sbjct: 304 CDVYRKMCDEDPQLFAYNFRE---ELKQKKRKGQEKDGDS 340
>gi|48976087|ref|NP_852139.2| dimethyladenosine transferase 1, mitochondrial [Rattus norvegicus]
gi|47718050|gb|AAH70907.1| Transcription factor B1, mitochondrial [Rattus norvegicus]
gi|149038492|gb|EDL92822.1| transcription factor B1, mitochondrial [Rattus norvegicus]
Length = 345
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 74/160 (46%), Positives = 104/160 (65%), Gaps = 4/160 (2%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++AT G +QR RLSIM Q CNV+H FTIPGKAF+PKP+VDVGVVH P V P I PFK
Sbjct: 184 LVATTGSKQRSRLSIMAQYLCNVEHLFTIPGKAFVPKPEVDVGVVHLMPLVQPKIKQPFK 243
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKR-QLVVSLLERACVKPILRPYQLSVQEFGQI 119
L+E+VV +F++R+K ++ +LFP+ +R + LL+ A + P LRP LS+ F +
Sbjct: 244 LVEKVVQNVFQFRRKYCHRGLGMLFPEAQRLESTGRLLQLADIDPTLRPTHLSLMHFKSL 303
Query: 120 CLAYRDMCEEMPGLYEYTLEDTPGDIEPEAVAEQEGEGDE 159
C YR MC+E P L+ Y + +++ + QE +GD
Sbjct: 304 CDVYRKMCDEDPQLFAYNFRE---ELKQKKRKGQEKDGDS 340
>gi|270014921|gb|EFA11369.1| hypothetical protein TcasGA2_TC011527 [Tribolium castaneum]
Length = 379
Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 68/137 (49%), Positives = 95/137 (69%), Gaps = 1/137 (0%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A EQRCRLS+MCQ WC+V+H+FTIPG+AF+PKP VDVGVV P+ HP++ LPFK
Sbjct: 230 IVAPVTHEQRCRLSVMCQFWCDVEHKFTIPGRAFVPKPDVDVGVVTLVPKKHPLVKLPFK 289
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKR-QLVVSLLERACVKPILRPYQLSVQEFGQI 119
+E+++ +F RQK K LFP+ KR +L V L A V +RP+++S +EF +I
Sbjct: 290 TVEKILRTVFNMRQKWSIKGGGRLFPEDKRDELAVKLFALADVDSRIRPFEISNEEFARI 349
Query: 120 CLAYRDMCEEMPGLYEY 136
C AY+ +CEE P + Y
Sbjct: 350 CYAYKVICEEDPEIESY 366
>gi|397468334|ref|XP_003805843.1| PREDICTED: dimethyladenosine transferase 1, mitochondrial [Pan
paniscus]
Length = 346
Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 74/166 (44%), Positives = 107/166 (64%), Gaps = 4/166 (2%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G +QR RLS+M Q CNV H FTIPG+AF+PKP+VDVGVVHFTP + P I+ PFK
Sbjct: 184 LAANTGSKQRSRLSVMAQYLCNVRHIFTIPGQAFVPKPEVDVGVVHFTPLIQPKIEQPFK 243
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKR-QLVVSLLERACVKPILRPYQLSVQEFGQI 119
L+E+VV +F++R+K ++ +LFP+ +R + LLE A + P LRP QLS+ F +
Sbjct: 244 LVEKVVQNVFQFRRKYCHRGLRMLFPEAQRLESTGRLLELADIDPTLRPRQLSISHFKSL 303
Query: 120 CLAYRDMCEEMPGLYEYTLEDTPGDIEPEAVAEQEGEGDEIDFNKL 165
C YR MC+E P L+ Y + +++ +E E D+ + +L
Sbjct: 304 CDVYRKMCDEDPQLFAYNFRE---ELKRRKSKNEEKEEDDTENYRL 346
>gi|114609909|ref|XP_001143300.1| PREDICTED: dimethyladenosine transferase 1, mitochondrial isoform 3
[Pan troglodytes]
gi|410209816|gb|JAA02127.1| transcription factor B1, mitochondrial [Pan troglodytes]
gi|410295310|gb|JAA26255.1| transcription factor B1, mitochondrial [Pan troglodytes]
gi|410336263|gb|JAA37078.1| transcription factor B1, mitochondrial [Pan troglodytes]
Length = 346
Score = 148 bits (374), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 74/166 (44%), Positives = 107/166 (64%), Gaps = 4/166 (2%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G +QR RLS+M Q CNV H FTIPG+AF+PKP+VDVGVVHFTP + P I+ PFK
Sbjct: 184 LAANTGSKQRSRLSVMAQYLCNVRHIFTIPGQAFVPKPEVDVGVVHFTPLIQPKIEQPFK 243
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKR-QLVVSLLERACVKPILRPYQLSVQEFGQI 119
L+E+VV +F++R+K ++ +LFP+ +R + LLE A + P LRP QLS+ F +
Sbjct: 244 LVEKVVQNVFQFRRKYCHRGLRMLFPEAQRLESTGRLLELADIDPTLRPRQLSISHFKSL 303
Query: 120 CLAYRDMCEEMPGLYEYTLEDTPGDIEPEAVAEQEGEGDEIDFNKL 165
C YR MC+E P L+ Y + +++ +E E D+ + +L
Sbjct: 304 CEVYRKMCDEDPQLFAYNFRE---ELKRRKSKNEEKEEDDAENYRL 346
>gi|4929619|gb|AAD34070.1|AF151833_1 CGI-75 protein [Homo sapiens]
Length = 346
Score = 148 bits (374), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 74/166 (44%), Positives = 107/166 (64%), Gaps = 4/166 (2%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G +QR RLS+M Q CNV H FTIPG+AF+PKP+VDVGVVHFTP + P I+ PFK
Sbjct: 184 LAANTGSKQRSRLSVMAQYLCNVRHIFTIPGQAFVPKPEVDVGVVHFTPLIQPKIEQPFK 243
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKR-QLVVSLLERACVKPILRPYQLSVQEFGQI 119
L+E+VV +F++R+K ++ +LFP+ +R + LLE A + P LRP QLS+ F +
Sbjct: 244 LVEKVVQNVFQFRRKYCHRGLRMLFPEAQRLESTGRLLELADIDPTLRPRQLSISHFKSL 303
Query: 120 CLAYRDMCEEMPGLYEYTLEDTPGDIEPEAVAEQEGEGDEIDFNKL 165
C YR MC+E P L+ Y + +++ +E E D+ + +L
Sbjct: 304 CDVYRKMCDEDPQLFAYNFRE---ELKRRKSKNEEKEEDDAENYRL 346
>gi|156415992|ref|NP_057104.2| dimethyladenosine transferase 1, mitochondrial [Homo sapiens]
gi|426354983|ref|XP_004044918.1| PREDICTED: dimethyladenosine transferase 1, mitochondrial isoform 1
[Gorilla gorilla gorilla]
gi|426354985|ref|XP_004044919.1| PREDICTED: dimethyladenosine transferase 1, mitochondrial isoform 2
[Gorilla gorilla gorilla]
gi|74751555|sp|Q8WVM0.1|TFB1M_HUMAN RecName: Full=Dimethyladenosine transferase 1, mitochondrial;
AltName: Full=Mitochondrial 12S rRNA dimethylase 1;
AltName: Full=Mitochondrial transcription factor B1;
Short=h-mtTFB; Short=h-mtTFB1; Short=hTFB1M;
Short=mtTFB1; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase 1; Flags:
Precursor
gi|17389500|gb|AAH17788.1| Transcription factor B1, mitochondrial [Homo sapiens]
gi|119568075|gb|EAW47690.1| transcription factor B1, mitochondrial [Homo sapiens]
gi|123982134|gb|ABM82896.1| transcription factor B1, mitochondrial [synthetic construct]
gi|123996967|gb|ABM86085.1| transcription factor B1, mitochondrial [synthetic construct]
gi|208967957|dbj|BAG73817.1| mitochondrial transcription factor B1 [synthetic construct]
gi|311350098|gb|ADP92254.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350100|gb|ADP92255.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350102|gb|ADP92256.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350104|gb|ADP92257.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350106|gb|ADP92258.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350108|gb|ADP92259.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350110|gb|ADP92260.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350112|gb|ADP92261.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350114|gb|ADP92262.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350116|gb|ADP92263.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350118|gb|ADP92264.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350120|gb|ADP92265.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350122|gb|ADP92266.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350124|gb|ADP92267.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350126|gb|ADP92268.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350128|gb|ADP92269.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350130|gb|ADP92270.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350132|gb|ADP92271.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350134|gb|ADP92272.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350136|gb|ADP92273.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350138|gb|ADP92274.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350140|gb|ADP92275.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350142|gb|ADP92276.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350144|gb|ADP92277.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350146|gb|ADP92278.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350148|gb|ADP92279.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350150|gb|ADP92280.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350152|gb|ADP92281.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350154|gb|ADP92282.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350156|gb|ADP92283.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350158|gb|ADP92284.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350160|gb|ADP92285.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350162|gb|ADP92286.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350164|gb|ADP92287.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350166|gb|ADP92288.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350168|gb|ADP92289.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350170|gb|ADP92290.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350172|gb|ADP92291.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350174|gb|ADP92292.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350176|gb|ADP92293.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
Length = 346
Score = 148 bits (374), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 74/166 (44%), Positives = 107/166 (64%), Gaps = 4/166 (2%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G +QR RLS+M Q CNV H FTIPG+AF+PKP+VDVGVVHFTP + P I+ PFK
Sbjct: 184 LAANTGSKQRSRLSVMAQYLCNVRHIFTIPGQAFVPKPEVDVGVVHFTPLIQPKIEQPFK 243
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKR-QLVVSLLERACVKPILRPYQLSVQEFGQI 119
L+E+VV +F++R+K ++ +LFP+ +R + LLE A + P LRP QLS+ F +
Sbjct: 244 LVEKVVQNVFQFRRKYCHRGLRMLFPEAQRLESTGRLLELADIDPTLRPRQLSISHFKSL 303
Query: 120 CLAYRDMCEEMPGLYEYTLEDTPGDIEPEAVAEQEGEGDEIDFNKL 165
C YR MC+E P L+ Y + +++ +E E D+ + +L
Sbjct: 304 CDVYRKMCDEDPQLFAYNFRE---ELKRRKSKNEEKEEDDAENYRL 346
>gi|158259991|dbj|BAF82173.1| unnamed protein product [Homo sapiens]
Length = 346
Score = 148 bits (374), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 74/166 (44%), Positives = 107/166 (64%), Gaps = 4/166 (2%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G +QR RLS+M Q CNV H FTIPG+AF+PKP+VDVGVVHFTP + P I+ PFK
Sbjct: 184 LAANTGSKQRSRLSVMAQYLCNVRHIFTIPGQAFVPKPEVDVGVVHFTPLIQPKIEQPFK 243
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKR-QLVVSLLERACVKPILRPYQLSVQEFGQI 119
L+E+VV +F++R+K ++ +LFP+ +R + LLE A + P LRP QLS+ F +
Sbjct: 244 LVEKVVQNVFQFRRKYCHRGLRMLFPEAQRLESTGRLLELADIDPTLRPRQLSISHFKSL 303
Query: 120 CLAYRDMCEEMPGLYEYTLEDTPGDIEPEAVAEQEGEGDEIDFNKL 165
C YR MC+E P L+ Y + +++ +E E D+ + +L
Sbjct: 304 CDVYRKMCDEDPQLFAYNFRE---ELKRRKSKNEEKEEDDAENYRL 346
>gi|122136705|sp|Q2PG46.1|TFB1M_MACFA RecName: Full=Dimethyladenosine transferase 1, mitochondrial;
AltName: Full=Mitochondrial 12S rRNA dimethylase 1;
AltName: Full=Mitochondrial transcription factor B1;
Short=mtTFB1; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase 1; Flags:
Precursor
gi|84578981|dbj|BAE72924.1| hypothetical protein [Macaca fascicularis]
Length = 345
Score = 148 bits (373), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 72/163 (44%), Positives = 105/163 (64%), Gaps = 4/163 (2%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G +QR RLS+M Q CNV H FTIPG+AF+PKP+VDVGVVHFTP + P I+ PFK
Sbjct: 184 LAANTGSKQRSRLSVMAQYLCNVRHIFTIPGRAFVPKPEVDVGVVHFTPLIQPKIEQPFK 243
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKR-QLVVSLLERACVKPILRPYQLSVQEFGQI 119
L+E+VV +F++R+K ++ +LFP+ +R + LLE A + P LRP QLS+ F +
Sbjct: 244 LVEKVVQNVFQFRRKYCHRGLGMLFPEAQRLENTGRLLELADIDPTLRPRQLSISHFKSL 303
Query: 120 CLAYRDMCEEMPGLYEYTLEDTPGDIEPEAVAEQEGEGDEIDF 162
C YR MC+E P L+ Y + ++ + ++E + D +
Sbjct: 304 CEVYRRMCDEDPQLFAYNFRE---ELRQRKIKKKEKQDDAKSY 343
>gi|402867874|ref|XP_003898054.1| PREDICTED: dimethyladenosine transferase 1, mitochondrial [Papio
anubis]
Length = 345
Score = 148 bits (373), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 72/163 (44%), Positives = 105/163 (64%), Gaps = 4/163 (2%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G +QR RLS+M Q CNV H FTIPG+AF+PKP+VDVGVVHFTP + P I+ PFK
Sbjct: 184 LTANTGSKQRSRLSVMAQYLCNVRHIFTIPGRAFVPKPEVDVGVVHFTPLIQPKIEQPFK 243
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKR-QLVVSLLERACVKPILRPYQLSVQEFGQI 119
L+E+VV +F++R+K ++ +LFP+ +R + LLE A + P LRP QLS+ F +
Sbjct: 244 LVEKVVQNVFQFRRKYCHRGLGMLFPEAERLENTGRLLELADIDPTLRPRQLSISHFKSL 303
Query: 120 CLAYRDMCEEMPGLYEYTLEDTPGDIEPEAVAEQEGEGDEIDF 162
C YR MC+E P L+ Y + ++ + ++E + D +
Sbjct: 304 CEVYRRMCDEDPQLFAYNFRE---ELRQRKIKKKEKQDDAKSY 343
>gi|348565500|ref|XP_003468541.1| PREDICTED: dimethyladenosine transferase 1, mitochondrial-like
[Cavia porcellus]
Length = 346
Score = 148 bits (373), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 70/141 (49%), Positives = 96/141 (68%), Gaps = 1/141 (0%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++AT G +QR RLS+M Q C V+H FTIPG+AF+PKPQVDVGVVHF P + P I+ PFK
Sbjct: 184 LVATTGSKQRSRLSVMAQYLCTVNHSFTIPGQAFVPKPQVDVGVVHFMPLIEPKIEQPFK 243
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKR-QLVVSLLERACVKPILRPYQLSVQEFGQI 119
L+E+VV F++R+K ++ +LFP+ +R + LL+ A + P LRP QLS+ F +
Sbjct: 244 LVEKVVQNAFQFRRKYCHRGLGMLFPEAQRLESTEKLLQLADIDPTLRPTQLSLLHFRSL 303
Query: 120 CLAYRDMCEEMPGLYEYTLED 140
C YR MC+E P L+ Y D
Sbjct: 304 CDIYRKMCDEDPQLFGYNFRD 324
>gi|355748806|gb|EHH53289.1| hypothetical protein EGM_13900 [Macaca fascicularis]
Length = 345
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/163 (44%), Positives = 105/163 (64%), Gaps = 4/163 (2%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G +QR RLS+M Q CNV H FTIPG+AF+PKP+VDVGVVHFTP + P I+ PFK
Sbjct: 184 LAANTGSKQRSRLSVMAQYLCNVRHIFTIPGRAFVPKPEVDVGVVHFTPLIQPRIEQPFK 243
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKR-QLVVSLLERACVKPILRPYQLSVQEFGQI 119
L+E+VV +F++R+K ++ +LFP+ +R + LLE A + P LRP QLS+ F +
Sbjct: 244 LVEKVVQNVFQFRRKYCHRGLGMLFPEAQRLENTGRLLELADIDPTLRPRQLSISHFKSL 303
Query: 120 CLAYRDMCEEMPGLYEYTLEDTPGDIEPEAVAEQEGEGDEIDF 162
C YR MC+E P L+ Y + ++ + ++E + D +
Sbjct: 304 CEVYRRMCDEDPQLFAYNFRE---ELRQRKIKKKEKQDDAKSY 343
>gi|387849079|ref|NP_001248411.1| transcription factor B1, mitochondrial [Macaca mulatta]
gi|355561958|gb|EHH18590.1| hypothetical protein EGK_15233 [Macaca mulatta]
gi|380813322|gb|AFE78535.1| dimethyladenosine transferase 1, mitochondrial [Macaca mulatta]
Length = 345
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/163 (44%), Positives = 105/163 (64%), Gaps = 4/163 (2%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G +QR RLS+M Q CNV H FTIPG+AF+PKP+VDVGVVHFTP + P I+ PFK
Sbjct: 184 LAANTGSKQRSRLSVMAQYLCNVRHIFTIPGRAFVPKPEVDVGVVHFTPLIQPKIEQPFK 243
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKR-QLVVSLLERACVKPILRPYQLSVQEFGQI 119
L+E+VV +F++R+K ++ +LFP+ +R + LLE A + P LRP QLS+ F +
Sbjct: 244 LVEKVVQNVFQFRRKYCHRGLGMLFPEAQRLENTGRLLELADIDPTLRPRQLSISHFRSL 303
Query: 120 CLAYRDMCEEMPGLYEYTLEDTPGDIEPEAVAEQEGEGDEIDF 162
C YR MC+E P L+ Y + ++ + ++E + D +
Sbjct: 304 CEVYRRMCDEDPQLFAYNFRE---ELRQRKIKKKEKQDDAKSY 343
>gi|62858143|ref|NP_001016494.1| dimethyladenosine transferase 1, mitochondrial [Xenopus (Silurana)
tropicalis]
gi|123893272|sp|Q28HM1.1|TFB1M_XENTR RecName: Full=Dimethyladenosine transferase 1, mitochondrial;
AltName: Full=Mitochondrial 12S rRNA dimethylase 1;
AltName: Full=Mitochondrial transcription factor B1;
Short=mtTFB1; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase 1; Flags:
Precursor
gi|89272950|emb|CAJ83142.1| transcription factor B1, mitochondrial [Xenopus (Silurana)
tropicalis]
gi|213624236|gb|AAI70821.1| transcription factor B1, mitochondrial [Xenopus (Silurana)
tropicalis]
gi|213624254|gb|AAI70849.1| transcription factor B1, mitochondrial [Xenopus (Silurana)
tropicalis]
Length = 346
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 106/161 (65%), Gaps = 1/161 (0%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A+ +QR RLSIM QN CNV + FTIPG+AF+PKP+VDVGVVHFTP + P I+ PFK
Sbjct: 184 LTASTSSKQRSRLSIMAQNLCNVKNCFTIPGRAFVPKPEVDVGVVHFTPFIQPKIEQPFK 243
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKR-QLVVSLLERACVKPILRPYQLSVQEFGQI 119
++E+VV +F++R+K + S+LFP+ R + +L A V P LRP +L++ F ++
Sbjct: 244 VVEKVVRSVFQFRRKYCHHGVSILFPEESRLKCTEQMLRLADVDPTLRPTELTMTHFKKL 303
Query: 120 CLAYRDMCEEMPGLYEYTLEDTPGDIEPEAVAEQEGEGDEI 160
C YR+MC++ P L+ Y + + + +EGE D++
Sbjct: 304 CNVYREMCDQNPNLFAYNFREELRMRKLQGKTTEEGEEDDL 344
>gi|22122569|ref|NP_666186.1| dimethyladenosine transferase 1, mitochondrial [Mus musculus]
gi|81878249|sp|Q8JZM0.1|TFB1M_MOUSE RecName: Full=Dimethyladenosine transferase 1, mitochondrial;
AltName: Full=Mitochondrial 12S rRNA dimethylase 1;
AltName: Full=Mitochondrial transcription factor B1;
Short=mtTFB1; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase 1; Flags:
Precursor
gi|21039484|gb|AAM33651.1|AF508971_1 transcription factor b1 [Mus musculus]
gi|21410720|gb|AAH32930.1| Transcription factor B1, mitochondrial [Mus musculus]
gi|148669697|gb|EDL01644.1| transcription factor B1, mitochondrial [Mus musculus]
Length = 345
Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 103/159 (64%), Gaps = 4/159 (2%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++AT G +Q RLSIM Q CNV+H FTIPGKAF+PKP+VDVGVVH TP + P I PFK
Sbjct: 184 LVATTGSKQHSRLSIMAQYLCNVEHLFTIPGKAFVPKPKVDVGVVHLTPLIEPKIKQPFK 243
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKR-QLVVSLLERACVKPILRPYQLSVQEFGQI 119
L+E+VV F++R+K ++ +LFP+ +R + LL+ A + P LRP LS+ F +
Sbjct: 244 LVEKVVQNAFQFRRKYCHRGLGMLFPEAQRLESTGRLLQLADIDPTLRPTHLSLMHFKSL 303
Query: 120 CLAYRDMCEEMPGLYEYTLEDTPGDIEPEAVAEQEGEGD 158
C YR MC+E P L+ Y + +++ + QE +GD
Sbjct: 304 CDVYRKMCDEDPQLFTYNFRE---ELKQKKSKGQEKDGD 339
>gi|116283278|gb|AAH05183.1| TFB1M protein [Homo sapiens]
Length = 341
Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/141 (49%), Positives = 96/141 (68%), Gaps = 1/141 (0%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G +QR RLS+M Q CNV H FTIPG+AF+PKP+VDVGVVHFTP + P I+ PFK
Sbjct: 184 LAANTGSKQRSRLSVMAQYLCNVRHIFTIPGQAFVPKPEVDVGVVHFTPLIQPKIEQPFK 243
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKR-QLVVSLLERACVKPILRPYQLSVQEFGQI 119
L+E+VV +F++R+K ++ +LFP+ +R + LLE A + P LRP QLS+ F +
Sbjct: 244 LVEKVVQNVFQFRRKYCHRGLRMLFPEAQRLESTGRLLELADIDPTLRPRQLSISHFKSL 303
Query: 120 CLAYRDMCEEMPGLYEYTLED 140
C YR MC+E P L+ Y +
Sbjct: 304 CDVYRKMCDEDPQLFAYNFRE 324
>gi|432111751|gb|ELK34796.1| Dimethyladenosine transferase 1, mitochondrial [Myotis davidii]
Length = 345
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 102/159 (64%), Gaps = 4/159 (2%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G +QR RLS+M Q C V H FTIPG+AF+PKP+VDVGVVHFTP P I+ PFK
Sbjct: 184 LAANTGSKQRSRLSVMAQYLCRVQHVFTIPGRAFVPKPEVDVGVVHFTPLTQPKIEQPFK 243
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKR-QLVVSLLERACVKPILRPYQLSVQEFGQI 119
L+E+VV +F++R+K ++ +LFP+ +R + LL+ A V P LRP QLSV F +
Sbjct: 244 LVEKVVQHVFQFRRKYCHRGLGMLFPEAQRLERTGRLLQWADVDPTLRPCQLSVSHFKSL 303
Query: 120 CLAYRDMCEEMPGLYEYTLEDTPGDIEPEAVAEQEGEGD 158
C YR MC+E P L+ Y + +++ A QE E D
Sbjct: 304 CDVYRRMCDEDPHLFAYNFRE---ELKKNKRAGQEREAD 339
>gi|395850689|ref|XP_003797909.1| PREDICTED: dimethyladenosine transferase 1, mitochondrial [Otolemur
garnettii]
Length = 344
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/141 (49%), Positives = 94/141 (66%), Gaps = 1/141 (0%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G +QR RLS+M Q C+V H FTIPG+AF+PKP+VDVGVVHFTP + P I+ PFK
Sbjct: 184 LTANTGGKQRSRLSVMAQYLCSVQHVFTIPGRAFVPKPEVDVGVVHFTPLIQPKIEQPFK 243
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVS-LLERACVKPILRPYQLSVQEFGQI 119
L+E+VV F++R+K ++ +LFP+ +R LL+ A V P LRP QLS+ F +
Sbjct: 244 LVEKVVQNAFQFRRKYCHRGLGMLFPEAQRVGSTGRLLQWADVDPTLRPSQLSISHFKSL 303
Query: 120 CLAYRDMCEEMPGLYEYTLED 140
C YR MC+E P L+ Y D
Sbjct: 304 CDVYRRMCDEDPNLFAYNFRD 324
>gi|149409344|ref|XP_001510710.1| PREDICTED: dimethyladenosine transferase 1, mitochondrial-like,
partial [Ornithorhynchus anatinus]
Length = 156
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/141 (51%), Positives = 94/141 (66%), Gaps = 1/141 (0%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A+ G QR RLSIM Q CNV + FTIPG+AF+PKP+VDVGV+HFTP V P I PFK
Sbjct: 2 LTASTGSRQRSRLSIMAQYLCNVQNCFTIPGRAFLPKPEVDVGVIHFTPLVEPQISQPFK 61
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKR-QLVVSLLERACVKPILRPYQLSVQEFGQI 119
L+E+VV +F++R+K YK LFP +R + +L A V P LRP QLS+ +F +
Sbjct: 62 LVEKVVQNVFQFRRKYCYKGVGNLFPNTQRLERTKEMLMVADVDPTLRPGQLSILQFKSL 121
Query: 120 CLAYRDMCEEMPGLYEYTLED 140
C AYR MC++ P L+ Y D
Sbjct: 122 CDAYRKMCDDDPALFTYNFRD 142
>gi|344264463|ref|XP_003404311.1| PREDICTED: dimethyladenosine transferase 1, mitochondrial-like
[Loxodonta africana]
Length = 345
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 70/141 (49%), Positives = 95/141 (67%), Gaps = 1/141 (0%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A+ G +QR RLS+M Q C+VDH FTIPG+AFIPKP+VDVGVVHFTP P+I PFK
Sbjct: 184 LTASTGSKQRSRLSVMAQYLCSVDHVFTIPGQAFIPKPEVDVGVVHFTPLTEPVIKQPFK 243
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKR-QLVVSLLERACVKPILRPYQLSVQEFGQI 119
L+E++V F++R+K Y+ +LFP+ +R + LL+ A V P LRP QLS+ F +
Sbjct: 244 LVEKLVQNTFQFRRKYCYRGLGMLFPEAQRLESTGKLLQLADVDPTLRPCQLSLSHFKSL 303
Query: 120 CLAYRDMCEEMPGLYEYTLED 140
C YR MC+ P L+ Y +
Sbjct: 304 CDVYRKMCDGDPQLFAYNFRE 324
>gi|118088399|ref|XP_426165.2| PREDICTED: dimethyladenosine transferase 1, mitochondrial [Gallus
gallus]
Length = 350
Score = 145 bits (366), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 73/164 (44%), Positives = 104/164 (63%), Gaps = 5/164 (3%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G +QR RLSIM Q+ C VD+ F IPG+AF+PKP VDV VVHFTP V P I PF+
Sbjct: 184 LTANTGGKQRSRLSIMSQHLCTVDNCFVIPGQAFVPKPDVDVAVVHFTPLVQPKIQQPFE 243
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKR-QLVVSLLERACVKPILRPYQLSVQEFGQI 119
L+E+VV +F++R+K Y+ +LFP+R+R + L+ A V P LRP+QL++ F +
Sbjct: 244 LVEKVVQSVFQFRRKYCYRGVEILFPERERLKKTEQLMMAADVDPTLRPFQLTMAHFRNL 303
Query: 120 CLAYRDMCEEMPGLYEYTLEDTPGDIE----PEAVAEQEGEGDE 159
C YR MC+E P L+ Y + G + PE++ + E +E
Sbjct: 304 CNTYRKMCDEDPSLFAYNYREELGQTKRKHSPESIDQLEQTKEE 347
>gi|197101331|ref|NP_001126887.1| dimethyladenosine transferase 1, mitochondrial [Pongo abelii]
gi|75054716|sp|Q5R4V9.1|TFB1M_PONAB RecName: Full=Dimethyladenosine transferase 1, mitochondrial;
AltName: Full=Mitochondrial 12S rRNA dimethylase 1;
AltName: Full=Mitochondrial transcription factor B1;
Short=mtTFB1; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase 1; Flags:
Precursor
gi|55733044|emb|CAH93207.1| hypothetical protein [Pongo abelii]
Length = 343
Score = 145 bits (365), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 104/162 (64%), Gaps = 4/162 (2%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G +QR RLS+M Q CNV H FTIPG+AF+PKP+VDVGVVHFTP + P I+ PFK
Sbjct: 184 LAANTGSKQRSRLSVMAQYLCNVRHIFTIPGRAFVPKPEVDVGVVHFTPLIQPKIEQPFK 243
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKR-QLVVSLLERACVKPILRPYQLSVQEFGQI 119
L+E+VV +F++R+K ++ +LFP+ +R + LLE A V P LRP Q S+ F +
Sbjct: 244 LVEKVVQNVFQFRRKYCHRGLRMLFPEAQRLESTGRLLELADVDPTLRPCQPSISHFKSL 303
Query: 120 CLAYRDMCEEMPGLYEYTLEDTPGDIEPEAVAEQEGEGDEID 161
C YR MC+E P L+ Y + +++ +E E D+ +
Sbjct: 304 CDVYRKMCDEDPQLFAYNFRE---ELKQRKSKNEEKEEDDAE 342
>gi|147904625|ref|NP_001079850.1| dimethyladenosine transferase 1, mitochondrial [Xenopus laevis]
gi|82188081|sp|Q7T0W5.1|TFB1M_XENLA RecName: Full=Dimethyladenosine transferase 1, mitochondrial;
AltName: Full=Mitochondrial 12S rRNA dimethylase 1;
AltName: Full=Mitochondrial transcription factor B1;
Short=mtTFB1; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase 1; Flags:
Precursor
gi|33417098|gb|AAH56010.1| MGC68924 protein [Xenopus laevis]
Length = 344
Score = 145 bits (365), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 71/138 (51%), Positives = 96/138 (69%), Gaps = 1/138 (0%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A+ +QR RLSIM Q CNV + FTIPG+AFIPKP+VDVGVVH TP V P I+ PFK
Sbjct: 184 LTASTKNKQRSRLSIMSQYLCNVKNCFTIPGRAFIPKPKVDVGVVHLTPFVQPKIEQPFK 243
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKR-QLVVSLLERACVKPILRPYQLSVQEFGQI 119
L+E+VV CIF++R+K + S+LFP+ R QL +L A V P LRP +L++ F ++
Sbjct: 244 LVEKVVRCIFQFRRKYCHHGVSILFPEEIRIQLTEQMLRLADVDPTLRPTELTMTHFKKL 303
Query: 120 CLAYRDMCEEMPGLYEYT 137
C YR+MC++ P L+ Y
Sbjct: 304 CNVYREMCDQNPHLFSYN 321
>gi|417399311|gb|JAA46678.1| Putative ribosomal rna adenine dimethylase [Desmodus rotundus]
Length = 345
Score = 145 bits (365), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 71/159 (44%), Positives = 102/159 (64%), Gaps = 4/159 (2%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A+ G QR RLS+M Q+ C+V H T+PG+AF+PKP+VDVGVVHFTP P I+ PF
Sbjct: 184 LTASTGSRQRSRLSVMAQHLCHVQHLLTVPGRAFVPKPEVDVGVVHFTPLTRPRIEQPFP 243
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPK-RKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
L+E+VV F +R+K ++ +LFP+ ++R+ LL+ A V P LRP QLSV F +
Sbjct: 244 LVEKVVQSAFHFRRKYCHRGLGMLFPEAQRRESTGKLLQMAEVDPTLRPTQLSVSHFRSL 303
Query: 120 CLAYRDMCEEMPGLYEYTLEDTPGDIEPEAVAEQEGEGD 158
C YR+MC++ P L+ Y + + + +QE EGD
Sbjct: 304 CDVYREMCDKDPRLFAYNFRE---ERKKNKCKDQEQEGD 339
>gi|242023243|ref|XP_002432045.1| Dimethyladenosine transferase, putative [Pediculus humanus
corporis]
gi|212517403|gb|EEB19307.1| Dimethyladenosine transferase, putative [Pediculus humanus
corporis]
Length = 350
Score = 144 bits (364), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 64/137 (46%), Positives = 95/137 (69%), Gaps = 1/137 (0%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+I G + RCRLS+MCQNWC+V +F IPG AF+PKP+VDVGVVHF P + P I + F+
Sbjct: 177 IIGIPGSKNRCRLSVMCQNWCDVHLKFKIPGTAFLPKPKVDVGVVHFEPLIEPFIKMDFE 236
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKR-KRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
++E+V+ +F YRQK + + LFPK +L V L +R+ + P LR YQ+++ ++ ++
Sbjct: 237 IVEKVLRIMFNYRQKYCNRAVANLFPKELSDKLSVELFQRSELNPKLRSYQMTMDDWNRL 296
Query: 120 CLAYRDMCEEMPGLYEY 136
CLAY+ +C+ P LY Y
Sbjct: 297 CLAYKFICDRDPRLYSY 313
>gi|169642197|gb|AAI60475.1| tfb1m protein [Xenopus (Silurana) tropicalis]
Length = 346
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 105/161 (65%), Gaps = 1/161 (0%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A+ +QR RLSIM Q CNV + FTIPG+AF+PKP+VDVGVVHFTP + P I+ PFK
Sbjct: 184 LTASTSSKQRSRLSIMAQYLCNVKNCFTIPGRAFVPKPEVDVGVVHFTPFIQPKIEQPFK 243
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKR-QLVVSLLERACVKPILRPYQLSVQEFGQI 119
++E+VV +F++R+K + S+LFP+ R + +L A V P LRP +L++ F ++
Sbjct: 244 VVEKVVRSVFQFRRKYCHHGVSILFPEESRLKCTEQMLRLADVDPTLRPTELTMTHFKKL 303
Query: 120 CLAYRDMCEEMPGLYEYTLEDTPGDIEPEAVAEQEGEGDEI 160
C YR+MC++ P L+ Y + + + +EGE D++
Sbjct: 304 CNVYREMCDQNPNLFAYNFREELRMRKLQGKTTEEGEEDDL 344
>gi|194227549|ref|XP_001493452.2| PREDICTED: mitochondrial dimethyladenosine transferase 1-like
[Equus caballus]
Length = 348
Score = 144 bits (362), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/160 (45%), Positives = 102/160 (63%), Gaps = 4/160 (2%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ AT G +QR RLSIM Q C+V H TIPG+AF+PKP+VDVGVV FTP P I+ PF+
Sbjct: 184 LTATTGSKQRSRLSIMAQYLCSVQHVLTIPGRAFVPKPEVDVGVVRFTPLTQPRIEQPFQ 243
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKR-QLVVSLLERACVKPILRPYQLSVQEFGQI 119
L+E+VV +F++R+K ++ +LFP+ +R + LL+ A V P LRP QLSV F +
Sbjct: 244 LVEKVVQNVFQFRRKYCHRGLGMLFPEAQRLESTGKLLQLADVDPTLRPSQLSVSHFKSL 303
Query: 120 CLAYRDMCEEMPGLYEYTLEDTPGDIEPEAVAEQEGEGDE 159
C YR MC+E P L+ Y + +++ QE E +E
Sbjct: 304 CDVYRKMCDEDPHLFAYNFRE---ELKQNKSKNQEKEDEE 340
>gi|440909491|gb|ELR59395.1| Mitochondrial dimethyladenosine transferase 1 [Bos grunniens mutus]
Length = 341
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/141 (49%), Positives = 93/141 (65%), Gaps = 1/141 (0%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ AT G +QR RLSIM Q C+V H TIPG+AF+PKP+VD GVVHFTP P I+ PFK
Sbjct: 184 LTATTGSKQRSRLSIMAQYLCDVQHILTIPGQAFVPKPEVDSGVVHFTPLTRPRIEQPFK 243
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKR-QLVVSLLERACVKPILRPYQLSVQEFGQI 119
L+E+VV F++R+K ++ +LFP+ +R + LLE A V P LRP QL+V F +
Sbjct: 244 LVEKVVQNAFQFRRKYCHRGLGMLFPEARRLESTGKLLELADVDPTLRPTQLTVSHFKSL 303
Query: 120 CLAYRDMCEEMPGLYEYTLED 140
C YR MC+E P L+ Y +
Sbjct: 304 CDVYRKMCDEDPHLFAYNFRE 324
>gi|395535194|ref|XP_003775370.1| PREDICTED: LOW QUALITY PROTEIN: dimethyladenosine transferase 1,
mitochondrial-like [Sarcophilus harrisii]
Length = 392
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/144 (50%), Positives = 93/144 (64%), Gaps = 1/144 (0%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+IA G +QR RLSIM Q C V H FTIPG+AF+PKP+VDVGVVHFTP V P I+ PFK
Sbjct: 195 LIAGIGNKQRSRLSIMAQYLCKVQHSFTIPGRAFVPKPEVDVGVVHFTPLVQPRINQPFK 254
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKR-QLVVSLLERACVKPILRPYQLSVQEFGQI 119
L+E+VV F++R+K + +LFP+ +R + +L A V P LRP QLS+ F +
Sbjct: 255 LVEKVVQSTFQFRRKYCHHGIGILFPQAERSENTQKMLMLADVDPTLRPAQLSMLHFKNL 314
Query: 120 CLAYRDMCEEMPGLYEYTLEDTPG 143
C YR MC+E L+ Y D G
Sbjct: 315 CDVYRKMCDEDSNLFSYNFRDELG 338
>gi|387915432|gb|AFK11325.1| dimethyladenosine transferase 1, mitochondrial [Callorhinchus
milii]
Length = 353
Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/141 (47%), Positives = 98/141 (69%), Gaps = 1/141 (0%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+IA+ G QR RLSIM Q CNV F IPG+AF+PKP+VDVGV+HFTP + P I+ PFK
Sbjct: 183 LIASTGSRQRSRLSIMAQYLCNVKSCFMIPGRAFVPKPKVDVGVIHFTPLMEPQINQPFK 242
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKR-QLVVSLLERACVKPILRPYQLSVQEFGQI 119
L+E+VV C+F +R+K ++ ++LFP+ +R +L +++ A V P+LRP +LS+ F ++
Sbjct: 243 LVEKVVRCVFSFRRKYCHRGIAILFPESQRKELTDQMIDVADVDPLLRPVELSIPHFRRL 302
Query: 120 CLAYRDMCEEMPGLYEYTLED 140
C AY +C E P L+ Y +
Sbjct: 303 CDAYGQLCAEHPHLFTYNFRE 323
>gi|328909245|gb|AEB61290.1| dimethyladenosine transferase 1 mitochondrial-like protein, partial
[Equus caballus]
Length = 329
Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 69/147 (46%), Positives = 96/147 (65%), Gaps = 1/147 (0%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ AT G +QR RLSIM Q C+V H TIPG+AF+PKP+VDVGVV FTP P I+ PF+
Sbjct: 164 LTATTGSKQRSRLSIMAQYLCSVQHVLTIPGRAFVPKPEVDVGVVRFTPLTQPRIEQPFQ 223
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKR-QLVVSLLERACVKPILRPYQLSVQEFGQI 119
L+E+VV +F++R+K ++ +LFP+ +R + LL+ + V P LRP QLSV F +
Sbjct: 224 LVEKVVQNVFQFRRKYCHRGLGMLFPEAQRVESTGKLLQLSDVDPTLRPSQLSVSHFKSL 283
Query: 120 CLAYRDMCEEMPGLYEYTLEDTPGDIE 146
C YR MC+E P L+ Y + I+
Sbjct: 284 CDVYRKMCDEDPHLFAYNFRENSSKIK 310
>gi|389609565|dbj|BAM18394.1| mitochondrial transcription factor B1 [Papilio xuthus]
Length = 341
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 68/130 (52%), Positives = 89/130 (68%), Gaps = 1/130 (0%)
Query: 8 EQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFKLIERVVS 67
+QRCRLS+MCQNWCNV ++F IPG AF+PKP VDVGVV TP P+I LPFKLIE+VV
Sbjct: 193 KQRCRLSVMCQNWCNVKYKFDIPGSAFLPKPDVDVGVVTLTPLKQPVIKLPFKLIEKVVR 252
Query: 68 CIFRYRQKQVYKPASLLFPKRKR-QLVVSLLERACVKPILRPYQLSVQEFGQICLAYRDM 126
IF RQK + A LFP+ R ++ + + A + P+ RPYQ++ EFG++C AY+ +
Sbjct: 253 QIFSMRQKYSIRGAQTLFPEDIREEMALKMYNIADLDPVTRPYQITNSEFGRLCEAYKAI 312
Query: 127 CEEMPGLYEY 136
E P L Y
Sbjct: 313 ITEHPDLENY 322
>gi|167830454|ref|NP_001108082.1| mitochondrial dimethyladenosine transferase 1 isoform 1 [Bos
taurus]
gi|124053396|sp|Q2TBQ0.2|TFB1M_BOVIN RecName: Full=Mitochondrial dimethyladenosine transferase 1;
AltName: Full=Mitochondrial 12S rRNA dimethylase 1;
AltName: Full=Mitochondrial transcription factor B1;
Short=mtTFB1; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase 1; Flags:
Precursor
gi|296483884|tpg|DAA25999.1| TPA: mitochondrial dimethyladenosine transferase 1 isoform 1 [Bos
taurus]
Length = 341
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 70/141 (49%), Positives = 92/141 (65%), Gaps = 1/141 (0%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ AT G +QR RLSIM Q C+V H TIPG+AF+PKP+VD GVVHFTP P I PFK
Sbjct: 184 LTATTGSKQRSRLSIMAQYLCDVQHILTIPGQAFVPKPEVDSGVVHFTPLTRPRIKQPFK 243
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKR-QLVVSLLERACVKPILRPYQLSVQEFGQI 119
L+E+VV F++R+K ++ +LFP+ +R + LLE A V P LRP QL+V F +
Sbjct: 244 LVEKVVQNAFQFRRKYCHRGLGMLFPEARRLESTGKLLELADVDPTLRPTQLTVSHFKSL 303
Query: 120 CLAYRDMCEEMPGLYEYTLED 140
C YR MC+E P L+ Y +
Sbjct: 304 CDVYRKMCDEDPHLFAYNFRE 324
>gi|126311223|ref|XP_001381331.1| PREDICTED: dimethyladenosine transferase 1, mitochondrial-like
[Monodelphis domestica]
Length = 344
Score = 142 bits (358), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 69/141 (48%), Positives = 92/141 (65%), Gaps = 1/141 (0%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G +QR RLSIM Q C VD+ F IPG+AF+PKP+VDVGVVHFTP V P I+ PFK
Sbjct: 184 LTAGTGNKQRSRLSIMAQYLCKVDNSFIIPGRAFVPKPEVDVGVVHFTPLVQPQINQPFK 243
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKR-QLVVSLLERACVKPILRPYQLSVQEFGQI 119
L+E+VV F++R+K + +LFP+ +R + +L A V P LRP QLS+ F +
Sbjct: 244 LVEKVVQSTFQFRRKYCHHGIGILFPQAERSKNTEKMLMLADVDPTLRPSQLSILHFKNL 303
Query: 120 CLAYRDMCEEMPGLYEYTLED 140
C YR MC+E P L+ Y +
Sbjct: 304 CDVYRKMCDENPNLFAYNFRE 324
>gi|291397177|ref|XP_002714996.1| PREDICTED: Dimethyladenosine transferase 1, mitochondrial-like
[Oryctolagus cuniculus]
Length = 364
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/141 (49%), Positives = 95/141 (67%), Gaps = 1/141 (0%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ AT G +QR RLSIM Q C+V+H FTIPG+AF+PKP+VDVGVV FTP + P I+ PFK
Sbjct: 184 LAATTGSKQRSRLSIMAQYLCHVEHVFTIPGRAFVPKPEVDVGVVRFTPLIQPRIEQPFK 243
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKR-QLVVSLLERACVKPILRPYQLSVQEFGQI 119
L+E+VV F++R+K Y+ +LFP+ +R + LL A V+P LRP QLS+ F +
Sbjct: 244 LVEKVVQNAFQFRRKYCYRGLGMLFPEAQRLESTERLLHLADVEPTLRPRQLSIAHFRSL 303
Query: 120 CLAYRDMCEEMPGLYEYTLED 140
C YR MC+ P L+ Y +
Sbjct: 304 CDIYRRMCDGDPQLFAYDFRE 324
>gi|281345012|gb|EFB20596.1| hypothetical protein PANDA_016957 [Ailuropoda melanoleuca]
Length = 345
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 69/141 (48%), Positives = 93/141 (65%), Gaps = 1/141 (0%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G +QR RLS+M Q C+V H TIPG+AF+PKP+VDVGVV FTP V P I+ PFK
Sbjct: 184 LTANTGSKQRSRLSVMAQYLCDVQHILTIPGQAFVPKPEVDVGVVRFTPLVRPRIEQPFK 243
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKR-QLVVSLLERACVKPILRPYQLSVQEFGQI 119
L+E+VV F++R+K Y+ +LFP+ +R + LLE A V P L+P QLSV F +
Sbjct: 244 LVEKVVENAFQFRRKYCYRGLGMLFPEIQRVESTEKLLELADVDPTLQPSQLSVSHFKSL 303
Query: 120 CLAYRDMCEEMPGLYEYTLED 140
C Y+ MC+E P L+ Y +
Sbjct: 304 CHVYQKMCDEDPHLFAYNFRE 324
>gi|301783565|ref|XP_002927199.1| PREDICTED: mitochondrial dimethyladenosine transferase 1-like
[Ailuropoda melanoleuca]
Length = 351
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 69/141 (48%), Positives = 93/141 (65%), Gaps = 1/141 (0%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G +QR RLS+M Q C+V H TIPG+AF+PKP+VDVGVV FTP V P I+ PFK
Sbjct: 184 LTANTGSKQRSRLSVMAQYLCDVQHILTIPGQAFVPKPEVDVGVVRFTPLVRPRIEQPFK 243
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKR-QLVVSLLERACVKPILRPYQLSVQEFGQI 119
L+E+VV F++R+K Y+ +LFP+ +R + LLE A V P L+P QLSV F +
Sbjct: 244 LVEKVVENAFQFRRKYCYRGLGMLFPEIQRVESTEKLLELADVDPTLQPSQLSVSHFKSL 303
Query: 120 CLAYRDMCEEMPGLYEYTLED 140
C Y+ MC+E P L+ Y +
Sbjct: 304 CHVYQKMCDEDPHLFAYNFRE 324
>gi|321476312|gb|EFX87273.1| hypothetical protein DAPPUDRAFT_307097 [Daphnia pulex]
Length = 332
Score = 138 bits (348), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 70/144 (48%), Positives = 90/144 (62%), Gaps = 1/144 (0%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
M+A G +RCRLS+M Q+ C V+H+FTIPGKAF+PKP VDVGVVHFTP P I PFK
Sbjct: 182 MVAKIGSRERCRLSVMVQHLCYVEHKFTIPGKAFVPKPNVDVGVVHFTPLATPKIQAPFK 241
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKR-QLVVSLLERACVKPILRPYQLSVQEFGQI 119
L+E+V F +RQK + LFP R + LL+ A V LRP++LS++EF +I
Sbjct: 242 LVEKVARNTFSFRQKYCRRGLETLFPSSMRDEQTHKLLQLADVDGTLRPFELSIEEFNRI 301
Query: 120 CLAYRDMCEEMPGLYEYTLEDTPG 143
C AY + E+ P L Y G
Sbjct: 302 CQAYSIILEKYPSLERYDSRSEDG 325
>gi|224048037|ref|XP_002196390.1| PREDICTED: dimethyladenosine transferase 1, mitochondrial
[Taeniopygia guttata]
Length = 351
Score = 138 bits (348), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 66/138 (47%), Positives = 93/138 (67%), Gaps = 1/138 (0%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G QR RLSIM Q+ C V++ F IPG+AF+PKP+VDV VVHFTP V P I+ PF+
Sbjct: 184 LTANPGSSQRSRLSIMAQHLCTVENCFIIPGQAFVPKPEVDVAVVHFTPLVQPKIEQPFE 243
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKR-QLVVSLLERACVKPILRPYQLSVQEFGQI 119
L+E+VV +F++R+K ++ LFP+ R + L+ A V P LRP+QLS+ +F +
Sbjct: 244 LVEKVVQSVFQFRRKYCFRGIETLFPENGRLKRTEQLMMTANVDPTLRPFQLSMSQFRNL 303
Query: 120 CLAYRDMCEEMPGLYEYT 137
C AYR MC+E P L+ +
Sbjct: 304 CNAYRKMCDEDPSLFVFN 321
>gi|449277869|gb|EMC85891.1| Dimethyladenosine transferase 1, mitochondrial [Columba livia]
Length = 346
Score = 138 bits (348), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 67/138 (48%), Positives = 93/138 (67%), Gaps = 1/138 (0%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+IA G +QR RLSIM Q+ C V + F IPG+AF+PKP+VDV VVHFTP V P I PF+
Sbjct: 184 LIANPGGKQRSRLSIMAQHLCTVKNCFVIPGEAFVPKPEVDVAVVHFTPLVQPKIQQPFE 243
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKR-QLVVSLLERACVKPILRPYQLSVQEFGQI 119
L+E+VV +F++R+K ++ LFP+ R + L+ A V P LRP+QLS+ +F +
Sbjct: 244 LVEKVVRSVFQFRRKYCFRGLETLFPQDGRLKRTEQLMMTANVDPTLRPFQLSMSQFRNL 303
Query: 120 CLAYRDMCEEMPGLYEYT 137
C YR MC+E P L+ Y+
Sbjct: 304 CDTYRKMCDEDPSLFAYS 321
>gi|357621625|gb|EHJ73400.1| dimethyladenosine transferase [Danaus plexippus]
Length = 339
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/137 (48%), Positives = 93/137 (67%), Gaps = 1/137 (0%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
M A +QRCRLS+M QNWC V+++F IPG AF+PKP+VDVGVV TP PII LPFK
Sbjct: 186 MAARITEKQRCRLSVMTQNWCIVNYKFDIPGSAFLPKPEVDVGVVTLTPLKQPIIKLPFK 245
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKR-QLVVSLLERACVKPILRPYQLSVQEFGQI 119
LIE+VV IF RQK + A LFP+ R ++ +++ + A + P+ RP+Q++ EFG++
Sbjct: 246 LIEKVVRQIFSMRQKYSIRGAQTLFPEEVREEMALTMYKMAEIDPVTRPFQIANGEFGRL 305
Query: 120 CLAYRDMCEEMPGLYEY 136
C AY+++ + P Y
Sbjct: 306 CEAYKEIITKYPEFENY 322
>gi|326915765|ref|XP_003204183.1| PREDICTED: dimethyladenosine transferase 1, mitochondrial-like
[Meleagris gallopavo]
Length = 350
Score = 135 bits (340), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 66/138 (47%), Positives = 91/138 (65%), Gaps = 1/138 (0%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G +QR RLSIM Q+ C V++ F IPG+AF+PKP VDV VVHFTP V P I PF+
Sbjct: 184 LTANTGGKQRSRLSIMSQHLCTVENCFVIPGQAFVPKPDVDVAVVHFTPLVQPKIQQPFE 243
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKR-QLVVSLLERACVKPILRPYQLSVQEFGQI 119
L+E+VV +F++R+K + +LFP+R+R + L+ A V P LRP QL++ F +
Sbjct: 244 LVEKVVQSVFQFRRKYCCRGVEILFPERERLKKTEQLMMAADVDPTLRPVQLTMSHFRNL 303
Query: 120 CLAYRDMCEEMPGLYEYT 137
C YR MC+E P L+ Y
Sbjct: 304 CNTYRKMCDEDPNLFAYN 321
>gi|327262022|ref|XP_003215825.1| PREDICTED: dimethyladenosine transferase 1, mitochondrial-like
[Anolis carolinensis]
Length = 345
Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 69/138 (50%), Positives = 88/138 (63%), Gaps = 1/138 (0%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A+ G QR RLSIM Q C V FTIPGKAF+PKP VDV VVHFTP V P I+ PFK
Sbjct: 184 LTASTGTRQRSRLSIMSQYLCTVHKCFTIPGKAFVPKPDVDVTVVHFTPLVQPKIEQPFK 243
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKR-QLVVSLLERACVKPILRPYQLSVQEFGQI 119
L+E+VV +F++R+K + +LFP+ R + +L A V P LRP QLS+ F +
Sbjct: 244 LVEKVVQSVFQFRRKYCHHGIRILFPEATRLEKAEQMLMLADVDPTLRPTQLSMFHFKNL 303
Query: 120 CLAYRDMCEEMPGLYEYT 137
C YR MC+E P L+ Y
Sbjct: 304 CDVYRKMCDEDPSLFAYN 321
>gi|348517483|ref|XP_003446263.1| PREDICTED: dimethyladenosine transferase 1, mitochondrial-like
[Oreochromis niloticus]
Length = 358
Score = 135 bits (339), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 66/141 (46%), Positives = 94/141 (66%), Gaps = 1/141 (0%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A+ G +QR RLSIM Q C V + FTIPG+AF+PKP+VDVGVVHFTP V P I PF+
Sbjct: 184 LTASTGSKQRSRLSIMAQYLCTVHNCFTIPGRAFVPKPEVDVGVVHFTPLVQPQIQQPFQ 243
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKR-QLVVSLLERACVKPILRPYQLSVQEFGQI 119
L+E+VV +F++R+K +K LFP+ R +L ++++A V PILRP +L++ +F +
Sbjct: 244 LVEKVVRNVFQFRRKHCHKGVEKLFPEACRVELTQEMMQKADVDPILRPTELTIPQFRAL 303
Query: 120 CLAYRDMCEEMPGLYEYTLED 140
AY +CE P L Y +
Sbjct: 304 ADAYAHLCEHEPALLAYEFRE 324
>gi|432940023|ref|XP_004082679.1| PREDICTED: dimethyladenosine transferase 1, mitochondrial-like
[Oryzias latipes]
Length = 343
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 65/141 (46%), Positives = 91/141 (64%), Gaps = 1/141 (0%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A+ G QR RLSIM Q C V + FTIPG+AF+PKP+VDVGVVHFTP + P I PFK
Sbjct: 184 LTASTGSRQRSRLSIMAQYLCTVHNCFTIPGRAFVPKPEVDVGVVHFTPLLQPRIQQPFK 243
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPK-RKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
L+E+VV +F++R+K +K LFP+ R+ +L +++ A V P+LRP +LS+ +
Sbjct: 244 LVEKVVRNVFQFRRKHCHKGLQKLFPEARRAELTQEMMQEADVDPLLRPTELSIPHIQAL 303
Query: 120 CLAYRDMCEEMPGLYEYTLED 140
AY +C PGL Y +
Sbjct: 304 ADAYAGLCRREPGLLSYEFRE 324
>gi|390362918|ref|XP_791286.3| PREDICTED: dimethyladenosine transferase 1, mitochondrial-like
[Strongylocentrotus purpuratus]
Length = 316
Score = 128 bits (321), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 87/137 (63%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G +QR RLSIM Q+ C V F IPG AF+PKPQ+DVGVVH TP P ID PFK
Sbjct: 178 LTAPPGDDQRSRLSIMAQHLCQVKQCFVIPGAAFVPKPQIDVGVVHLTPLRDPEIDAPFK 237
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
L+E++V +F +R+K + LFP ++ L + + + V P RP L+++EF +C
Sbjct: 238 LVEKLVRSVFHFRKKYCKRGVETLFPVERQDLTQEVFDTSGVDPTQRPVWLTMEEFNALC 297
Query: 121 LAYRDMCEEMPGLYEYT 137
++Y+++ + +P ++ Y
Sbjct: 298 MSYKNIIQRIPAMFHYN 314
>gi|443683944|gb|ELT88025.1| hypothetical protein CAPTEDRAFT_126486 [Capitella teleta]
Length = 330
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 90/140 (64%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
MIA EQR RLSIM Q C+V+ +F I G++F+P P+VD VVHFTPRV P+I PFK
Sbjct: 176 MIAQPEDEQRSRLSIMTQYLCDVNLKFVINGRSFVPPPEVDAAVVHFTPRVEPLIPYPFK 235
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
++E+VV +F++RQK + LFP + + ++ A + P R +QL++ EF ++C
Sbjct: 236 VVEKVVRHVFQFRQKMCKRGIQTLFPPEQVSMPKEMIALAEIDPETRSFQLTIDEFSRLC 295
Query: 121 LAYRDMCEEMPGLYEYTLED 140
AY ++C + PG+ +Y D
Sbjct: 296 GAYMEICRKNPGIIDYYFRD 315
>gi|351708504|gb|EHB11423.1| Dimethyladenosine transferase 1, mitochondrial [Heterocephalus
glaber]
Length = 435
Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 99/193 (51%), Gaps = 53/193 (27%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++AT G +QR RLS+M Q CNV H FTIPG+AF+PKP+VDVGVVHFTP + P I+ PFK
Sbjct: 220 LVATTGSKQRSRLSVMAQYLCNVKHIFTIPGQAFVPKPEVDVGVVHFTPLIQPKIEQPFK 279
Query: 61 LIERVVSCIFRYRQKQVYK------------------------------PA--------- 81
L+E+VV +F++R+K ++ PA
Sbjct: 280 LVEKVVQNVFQFRRKYCHRGLGSHYQTLSTMKVNSDLSYLTLKSGDHAVPAEKTIGLEEK 339
Query: 82 -------------SLLFPKRKR-QLVVSLLERACVKPILRPYQLSVQEFGQICLAYRDMC 127
+LFP+ +R + LLE A + P LRP QLS+ F +C YR MC
Sbjct: 340 LAPLAMTSSKPLFGMLFPEARRLESTGKLLELADIDPTLRPTQLSILHFRSLCDIYRKMC 399
Query: 128 EEMPGLYEYTLED 140
+E L+ Y +
Sbjct: 400 DEDQQLFGYNFRE 412
>gi|410898256|ref|XP_003962614.1| PREDICTED: dimethyladenosine transferase 1, mitochondrial-like
[Takifugu rubripes]
Length = 356
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 64/156 (41%), Positives = 96/156 (61%), Gaps = 4/156 (2%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A+ G QR RLSIM Q C + FTIPG+AF+PKP+VDVGVVHFTP V I PFK
Sbjct: 184 LTASTGSRQRSRLSIMAQYLCTIHSCFTIPGRAFVPKPEVDVGVVHFTPLVKAQIQQPFK 243
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKR-QLVVSLLERACVKPILRPYQLSVQEFGQI 119
L+E+VV +F++R+K +K LFP+ R ++ +++RA V P LRP +L++ + +
Sbjct: 244 LVEKVVRNVFQFRRKHCHKGIEKLFPEACRPEMTQEVMQRADVDPALRPTELTIPQIRAL 303
Query: 120 CLAYRDMCEEMPGLYEYTLEDTPGDIEPEAVAEQEG 155
AY +C P L Y + ++ + ++ Q+G
Sbjct: 304 ADAYAHLCTLEPDLQSYEFRE---ELRLKHLSRQQG 336
>gi|346471303|gb|AEO35496.1| hypothetical protein [Amblyomma maculatum]
Length = 330
Score = 122 bits (305), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 80/130 (61%)
Query: 9 QRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFKLIERVVSC 68
QRCRLSI+CQN+C HR T+ G +F+P VD+G+V P PII PF L+E+V++C
Sbjct: 197 QRCRLSILCQNYCITQHRLTLNGSSFVPPAAVDIGLVRLVPLKEPIIGQPFDLLEKVINC 256
Query: 69 IFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQICLAYRDMCE 128
+F RQK + K LFP + +L L++ + + P R QL+V+E G+IC Y + C
Sbjct: 257 LFNGRQKLLIKGVRNLFPHNREELAAKLVDVSDIDPTTRIIQLTVEEVGRICHVYEEFCA 316
Query: 129 EMPGLYEYTL 138
E P L +Y
Sbjct: 317 EEPELRQYNF 326
>gi|241248269|ref|XP_002402915.1| dimethyladenosine transferase, putative [Ixodes scapularis]
gi|215496424|gb|EEC06064.1| dimethyladenosine transferase, putative [Ixodes scapularis]
Length = 382
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/130 (46%), Positives = 78/130 (60%)
Query: 9 QRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFKLIERVVSC 68
QRCRLS+MCQ +C+V H+ T+ G +F PKP VDVGVV P V P+I PF L+E+V +C
Sbjct: 248 QRCRLSVMCQAYCSVQHQLTLSGGSFFPKPDVDVGVVRLVPLVEPVIQQPFDLVEKVCNC 307
Query: 69 IFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQICLAYRDMCE 128
+F RQK + LFP R L L++ + P R QL+V+E G+IC Y C
Sbjct: 308 LFNGRQKYLSNGLKNLFPSRHLDLAKDLVKLVEIDPQTRVVQLTVEEVGRICQVYEHFCL 367
Query: 129 EMPGLYEYTL 138
E LYEY
Sbjct: 368 EDAKLYEYNF 377
>gi|225714488|gb|ACO13090.1| Mitochondrial dimethyladenosine transferase 1, mitochondrial
precursor [Lepeophtheirus salmonis]
Length = 330
Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 89/141 (63%), Gaps = 1/141 (0%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+IA G + RCRLS+M QN+ +D+++T+PG AF+P P+V+VGV P P ID+PFK
Sbjct: 160 LIAPPGDKHRCRLSVMAQNYAKIDYKYTLPGAAFVPTPEVNVGVAVLIPLSVPYIDVPFK 219
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKR-QLVVSLLERACVKPILRPYQLSVQEFGQI 119
+ERVV+ I ++QK V++ + LFP R ++ + LL+ A V RP L++ +F +I
Sbjct: 220 FLERVVTTIMMHKQKSVFRTSLRLFPSEVRGKMAMQLLDVAGVSKDKRPLDLTMDDFARI 279
Query: 120 CLAYRDMCEEMPGLYEYTLED 140
Y+DM ++ + EY D
Sbjct: 280 TYTYQDMIQKYENVREYINRD 300
>gi|322800097|gb|EFZ21203.1| hypothetical protein SINV_11803 [Solenopsis invicta]
Length = 353
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/139 (44%), Positives = 85/139 (61%), Gaps = 3/139 (2%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A EQRCRLS+M Q W RF IPGKAF+PKP VDVGVV F P V P FK
Sbjct: 181 LVAQPFGEQRCRLSVMAQAWTFPTLRFIIPGKAFVPKPDVDVGVVSFAPLVKPRTQHDFK 240
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRK-RQLVVSLLERACVKPILRPYQLSVQEFGQI 119
E+VV +F +RQK + LFPK + + L + + + A ++P LRP QL+V+E ++
Sbjct: 241 FFEKVVRHLFSFRQKYSIRCIETLFPKERCKDLGLMMYKLADLEPTLRPTQLTVEEVDRL 300
Query: 120 CLAYRDMCEEMP--GLYEY 136
AY+ + E+ P L+EY
Sbjct: 301 ATAYKYLLEKHPELELFEY 319
>gi|195128817|ref|XP_002008857.1| GI13722 [Drosophila mojavensis]
gi|193920466|gb|EDW19333.1| GI13722 [Drosophila mojavensis]
Length = 413
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/135 (47%), Positives = 79/135 (58%), Gaps = 1/135 (0%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFKLI 62
A G EQRCRLS+M Q W +F IPGKAF+PKPQVDVGVV P P +LPF L+
Sbjct: 269 AQVGSEQRCRLSVMSQIWTEPVLKFIIPGKAFVPKPQVDVGVVKVIPLKRPKTELPFPLV 328
Query: 63 ERVVSCIFRYRQKQVYKPASLLFPKRKRQLVV-SLLERACVKPILRPYQLSVQEFGQICL 121
ERVV IF RQK + S L P R+ +L +RA VK +RP++LSV E ++
Sbjct: 329 ERVVRHIFSMRQKYCRRGYSTLLPPEGREETTQALFQRADVKDTMRPFELSVAECLRLAD 388
Query: 122 AYRDMCEEMPGLYEY 136
AY D P + Y
Sbjct: 389 AYADHLVAHPEVANY 403
>gi|156358457|ref|XP_001624535.1| predicted protein [Nematostella vectensis]
gi|156211322|gb|EDO32435.1| predicted protein [Nematostella vectensis]
Length = 325
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 81/130 (62%), Gaps = 1/130 (0%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A+EG R RL++M Q C R+++P F+PKP+VD +V TPRV P+ID PF
Sbjct: 177 IVASEGSYNRSRLAVMVQYLCEAKRRYSLPSSVFVPKPKVDASLVVLTPRVTPLIDAPFI 236
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
++E+VV +F R+K ++ P L+FP K +LV LL + V P R ++L++ EF +C
Sbjct: 237 VVEQVVKAVFAMRRKFIHTPLKLMFPG-KEELVGDLLRLSSVNPEQRAHELAMTEFNSLC 295
Query: 121 LAYRDMCEEM 130
AY ++ M
Sbjct: 296 SAYLEIARTM 305
>gi|328699806|ref|XP_003241051.1| PREDICTED: ribosomal RNA small subunit methyltransferase A-like
[Acyrthosiphon pisum]
Length = 352
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 76/130 (58%), Gaps = 1/130 (0%)
Query: 31 GKAFIPKPQVDVGVVHFTPRVHPIIDLPFKLIERVVSCIFRYRQKQVYKPASLLFPKRKR 90
G+AFIPKP VDVGVV TP PIIDLPF +IE+V+ +F +RQK + LFPK R
Sbjct: 215 GRAFIPKPNVDVGVVRLTPLKKPIIDLPFDIIEKVIRSVFNFRQKHCIRGVETLFPKPVR 274
Query: 91 -QLVVSLLERACVKPILRPYQLSVQEFGQICLAYRDMCEEMPGLYEYTLEDTPGDIEPEA 149
QL LL A ++P RP+QL+V EFG+I AY ++C+E P +Y D
Sbjct: 275 EQLASELLTAAAIEPSTRPFQLTVSEFGRISEAYMNICKEKPDYMKYNYRGQKSDDNWPF 334
Query: 150 VAEQEGEGDE 159
V + +E
Sbjct: 335 VEINNSDSNE 344
>gi|56759186|gb|AAW27733.1| SJCHGC05919 protein [Schistosoma japonicum]
Length = 289
Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 83/129 (64%)
Query: 8 EQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFKLIERVVS 67
EQR RLSIM Q +C+V + IPG AF+P P+VDVGVV TP P+I +P+ +E++V
Sbjct: 119 EQRSRLSIMSQAYCDVKYMKDIPGTAFVPPPKVDVGVVRLTPLKEPLIPVPYPYVEKLVR 178
Query: 68 CIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQICLAYRDMC 127
F +RQKQ+ + LFP + +LV+ L + A V+P+ + QL++ EF +C Y +C
Sbjct: 179 QAFHFRQKQIIRCLETLFPSDRPELVIQLFKEAGVQPVKQCIQLTMPEFRDLCFVYHRIC 238
Query: 128 EEMPGLYEY 136
+ P ++++
Sbjct: 239 QIEPDIFDF 247
>gi|195326894|ref|XP_002030159.1| GM25292 [Drosophila sechellia]
gi|194119102|gb|EDW41145.1| GM25292 [Drosophila sechellia]
Length = 414
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/132 (46%), Positives = 77/132 (58%), Gaps = 1/132 (0%)
Query: 6 GMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFKLIERV 65
G EQRCRLS+M Q W +FTIPGKAF+PKPQVDVGVV P P LPF L+ERV
Sbjct: 272 GGEQRCRLSVMSQVWTEPVMKFTIPGKAFVPKPQVDVGVVKLIPLKRPKTQLPFHLVERV 331
Query: 66 VSCIFRYRQKQVYKPASLLFPKRKRQLVV-SLLERACVKPILRPYQLSVQEFGQICLAYR 124
V IF RQK + L P R+ V L ERA V+ LRP++L+V++ ++ Y
Sbjct: 332 VRHIFSMRQKYCRRGYGTLLPPEDREEVAQKLFERAEVQDTLRPFELTVEQCLRLAEVYS 391
Query: 125 DMCEEMPGLYEY 136
+ P + Y
Sbjct: 392 EHLVTRPDVAAY 403
>gi|332019925|gb|EGI60385.1| Dimethyladenosine transferase 1, mitochondrial [Acromyrmex
echinatior]
Length = 351
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 82/138 (59%), Gaps = 1/138 (0%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A +QRCRLS+M Q W RF IPG+AF+PKP VDVGVV FTP V P FK
Sbjct: 181 LVAPPMGDQRCRLSVMAQTWTFPVLRFIIPGEAFVPKPDVDVGVVSFTPLVKPRTQYDFK 240
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQ-LVVSLLERACVKPILRPYQLSVQEFGQI 119
E + IF +RQK + LFPK R+ L + + + A ++P L+P QL++++ ++
Sbjct: 241 FFEMITRHIFNFRQKYSIRCIETLFPKEHRKDLGLMMYKLADLEPTLKPTQLTIEDINKL 300
Query: 120 CLAYRDMCEEMPGLYEYT 137
AY+ + E+ P L Y
Sbjct: 301 ATAYKYLLEKHPELKLYN 318
>gi|195589589|ref|XP_002084534.1| GD14323 [Drosophila simulans]
gi|194196543|gb|EDX10119.1| GD14323 [Drosophila simulans]
Length = 381
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/132 (46%), Positives = 77/132 (58%), Gaps = 1/132 (0%)
Query: 6 GMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFKLIERV 65
G EQRCRLS+M Q W +FTIPGKAF+PKPQVDVGVV P P LPF L+ERV
Sbjct: 239 GGEQRCRLSVMSQVWTEPVMKFTIPGKAFVPKPQVDVGVVKLIPLKRPKTQLPFHLVERV 298
Query: 66 VSCIFRYRQKQVYKPASLLFPKRKRQLVV-SLLERACVKPILRPYQLSVQEFGQICLAYR 124
V IF RQK + L P R+ V L ERA V+ LRP++L+V++ ++ Y
Sbjct: 299 VRHIFSMRQKYCRRGYGTLLPPEDREEVAQKLFERAEVQDTLRPFELTVEQCLRLAEVYS 358
Query: 125 DMCEEMPGLYEY 136
+ P + Y
Sbjct: 359 EHLVTRPDVAAY 370
>gi|195174159|ref|XP_002027848.1| GL16283 [Drosophila persimilis]
gi|194115524|gb|EDW37567.1| GL16283 [Drosophila persimilis]
Length = 337
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 86/150 (57%), Gaps = 4/150 (2%)
Query: 6 GMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFKLIERV 65
G EQRCRLS+M Q W +F IPGKAF+PKPQVDVGVV P P LPF L+ERV
Sbjct: 188 GSEQRCRLSVMSQIWTEPVMKFIIPGKAFVPKPQVDVGVVKLIPLKQPKTQLPFSLVERV 247
Query: 66 VSCIFRYRQKQVYKP-ASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQICLAYR 124
V IF RQK + +LL P + + +L +RA V+ LR ++LSV + ++ AY
Sbjct: 248 VRHIFSMRQKYCRRGYGTLLPPDSREETTQTLFQRADVRDTLRSFELSVPQCLRLADAYA 307
Query: 125 DMCEEMPGL--YEYTLEDTPGDIEPEAVAE 152
+ +E P + Y+Y P D+ A A
Sbjct: 308 EYIKEHPEVEAYDYRGPKNP-DVSGAAAAS 336
>gi|198466094|ref|XP_001353894.2| GA20255 [Drosophila pseudoobscura pseudoobscura]
gi|224471856|sp|Q2LZ79.2|TFB1M_DROPS RecName: Full=Dimethyladenosine transferase 1, mitochondrial;
AltName: Full=Mitochondrial 12S rRNA dimethylase 1;
AltName: Full=Mitochondrial transcription factor B1;
AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase 1; Flags:
Precursor
gi|198150443|gb|EAL29629.2| GA20255 [Drosophila pseudoobscura pseudoobscura]
Length = 337
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 86/150 (57%), Gaps = 4/150 (2%)
Query: 6 GMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFKLIERV 65
G EQRCRLS+M Q W +F IPGKAF+PKPQVDVGVV P P LPF L+ERV
Sbjct: 188 GSEQRCRLSVMSQIWTEPVMKFIIPGKAFVPKPQVDVGVVKLIPLKQPKTQLPFSLVERV 247
Query: 66 VSCIFRYRQKQVYKP-ASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQICLAYR 124
V IF RQK + +LL P + + +L +RA V+ LR ++LSV + ++ AY
Sbjct: 248 VRHIFSMRQKYCRRGYGTLLPPDSREETTQTLFQRADVRDTLRSFELSVPQCLRLADAYA 307
Query: 125 DMCEEMPGL--YEYTLEDTPGDIEPEAVAE 152
+ +E P + Y+Y P D+ A A
Sbjct: 308 EYIKEHPEVEAYDYRGPKNP-DVSGAAAAS 336
>gi|307184319|gb|EFN70777.1| Dimethyladenosine transferase 1, mitochondrial [Camponotus
floridanus]
Length = 348
Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 82/139 (58%), Gaps = 3/139 (2%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A QRCRLS+M Q W RF IPG AF+PKP VDVGVV FTP V P FK
Sbjct: 181 LVADVSHHQRCRLSVMAQTWTFPVLRFIIPGSAFVPKPDVDVGVVSFTPLVKPRTQHDFK 240
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKR-KRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
E++ +F +RQK + LFP +++L + + + + + P LR +QL+V + ++
Sbjct: 241 FFEKITRHVFSFRQKYSIRCIETLFPLDCRKELGLMMYKLSDLDPKLRAFQLTVHDIDRL 300
Query: 120 CLAYRDMCEEMP--GLYEY 136
AY+ + E+ P GLYEY
Sbjct: 301 ATAYKYLVEKHPEIGLYEY 319
>gi|195379696|ref|XP_002048613.1| GJ14068 [Drosophila virilis]
gi|194155771|gb|EDW70955.1| GJ14068 [Drosophila virilis]
Length = 420
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 76/135 (56%), Gaps = 1/135 (0%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFKLI 62
A G +QRCRLSIM Q W +F IPGKAF+PKPQVDVGVV P P LPF L+
Sbjct: 269 AKLGSDQRCRLSIMSQIWTEPLLKFIIPGKAFVPKPQVDVGVVKVIPLKKPKTQLPFSLV 328
Query: 63 ERVVSCIFRYRQKQVYKPASLLFPKRKRQLVV-SLLERACVKPILRPYQLSVQEFGQICL 121
ERVV IF RQK + S L P R+ +L + A V+ LRP++LSV E ++
Sbjct: 329 ERVVRHIFSMRQKYCRRGYSTLLPPEGREETTHALFQLADVQDTLRPFELSVDECLRLAD 388
Query: 122 AYRDMCEEMPGLYEY 136
Y D P L Y
Sbjct: 389 VYADHVAAHPQLASY 403
>gi|194748282|ref|XP_001956577.1| GF25284 [Drosophila ananassae]
gi|190623859|gb|EDV39383.1| GF25284 [Drosophila ananassae]
Length = 330
Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/132 (45%), Positives = 79/132 (59%), Gaps = 1/132 (0%)
Query: 6 GMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFKLIERV 65
G EQRCRLS+M Q W +F IPGKAF+PKPQVDVGVV P P LPF L+ERV
Sbjct: 188 GGEQRCRLSVMSQIWTEPVMKFIIPGKAFVPKPQVDVGVVKLIPLKQPKTQLPFPLVERV 247
Query: 66 VSCIFRYRQKQVYKPASLLFPKRKRQLVV-SLLERACVKPILRPYQLSVQEFGQICLAYR 124
V IF RQK + LFP+ R+ V +L +RA V+ LR ++LSV++ ++ Y
Sbjct: 248 VRHIFSMRQKYCRRGYGTLFPQEGREEVTQNLFQRAEVQDTLRSFELSVEQCLRLAEVYS 307
Query: 125 DMCEEMPGLYEY 136
+ P + +Y
Sbjct: 308 EHIASHPEVEKY 319
>gi|307213901|gb|EFN89152.1| Dimethyladenosine transferase 1, mitochondrial [Harpegnathos
saltator]
Length = 294
Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 87/163 (53%), Gaps = 5/163 (3%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A E EQRCRLS+M Q W RF IPG F+P+P VDVGVV FTP P FK
Sbjct: 114 LVAPESSEQRCRLSVMAQAWTFPVLRFVIPGHVFVPQPDVDVGVVSFTPLTKPCTQHDFK 173
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKR-KRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
E++V +F +RQK + LFP +++L + + + + + P +RP QL+V + ++
Sbjct: 174 FFEKIVRHVFSFRQKYSIRCVETLFPLHCRKELAMMMYKLSDLDPTIRPTQLTVNDIDRL 233
Query: 120 CLAYRDMCEEMPGLYEYTLEDT----PGDIEPEAVAEQEGEGD 158
AY+ + E+ P L Y + P V E + GD
Sbjct: 234 ATAYKYLLEKHPELEMYNYRASRHLLPQFNTQNVVVEDKVSGD 276
>gi|21357273|ref|NP_648499.1| mitochondrial transcription factor B1 [Drosophila melanogaster]
gi|74870888|sp|Q9VTM5.2|TFB1M_DROME RecName: Full=Dimethyladenosine transferase 1, mitochondrial;
AltName: Full=Mitochondrial 12S rRNA dimethylase 1;
AltName: Full=Mitochondrial transcription factor B1;
AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase 1; AltName:
Full=d-mtTFB1; Flags: Precursor
gi|17862606|gb|AAL39780.1| LD40326p [Drosophila melanogaster]
gi|23093638|gb|AAF50022.2| mitochondrial transcription factor B1 [Drosophila melanogaster]
gi|220946184|gb|ACL85635.1| mtTFB1-PA [synthetic construct]
gi|220955884|gb|ACL90485.1| mtTFB1-PA [synthetic construct]
Length = 330
Score = 108 bits (270), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/145 (43%), Positives = 82/145 (56%), Gaps = 2/145 (1%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFKLI 62
A G EQRCRLS+M Q W +FTIPGKAF+PKPQVDVGVV P P LPF L+
Sbjct: 185 APVGGEQRCRLSVMSQVWTEPVMKFTIPGKAFVPKPQVDVGVVKLIPLKRPKTQLPFHLV 244
Query: 63 ERVVSCIFRYRQKQVYKPASLLFPKRKRQLVV-SLLERACVKPILRPYQLSVQEFGQICL 121
ERVV IF RQK + L P R+ V L +RA V+ LRP++L+V++ ++
Sbjct: 245 ERVVRHIFSMRQKYCRRGYGTLLPPEDREEVAEKLFQRAEVQDTLRPFELTVEQCLRLAE 304
Query: 122 AYRDMCEEMPGLYEYTLEDTPGDIE 146
Y + P + Y P ++E
Sbjct: 305 VYSEHLVTRPEVAAYDYR-APKNVE 328
>gi|289739481|gb|ADD18488.1| mitochondrial transcription factor [Glossina morsitans morsitans]
Length = 334
Score = 108 bits (269), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 78/134 (58%), Gaps = 1/134 (0%)
Query: 6 GMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFKLIERV 65
G EQRCRLS+M Q W +F IPG AF+PKP+VDVGVV P P L F+L+E+V
Sbjct: 188 GHEQRCRLSVMSQIWTQPFLKFVIPGTAFVPKPEVDVGVVKLMPLKEPKTTLDFRLVEKV 247
Query: 66 VSCIFRYRQKQVYKPASLLFPKRKRQLVV-SLLERACVKPILRPYQLSVQEFGQICLAYR 124
V IF RQK + LFP +R+ V L + A V+ LRP+QLSV E ++ AY
Sbjct: 248 VRHIFNMRQKYCRRGFGTLFPPDQRESVTFELFKEADVEDTLRPFQLSVDECLRLATAYS 307
Query: 125 DMCEEMPGLYEYTL 138
+ ++ P + Y
Sbjct: 308 NFIQKNPEVESYNF 321
>gi|194869297|ref|XP_001972426.1| GG15524 [Drosophila erecta]
gi|190654209|gb|EDV51452.1| GG15524 [Drosophila erecta]
Length = 502
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 84/142 (59%), Gaps = 2/142 (1%)
Query: 6 GMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFKLIERV 65
G EQRCRLS+M Q W +FTIPGKAF+PKPQVDVGVV P P LPF L+ERV
Sbjct: 360 GGEQRCRLSVMSQVWTEPVMKFTIPGKAFVPKPQVDVGVVKLIPLKRPKTQLPFPLVERV 419
Query: 66 VSCIFRYRQKQVYKP-ASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQICLAYR 124
V IF RQK + +LL P+ + ++ L +RA V+ +RP++L+V++ ++ Y
Sbjct: 420 VRHIFSMRQKYCRRGFGTLLPPEDREEVAQKLFQRAEVQDTMRPFELTVEQCLRLAEVYS 479
Query: 125 DMCEEMPGLYEYTLEDTPGDIE 146
+ P + Y P ++E
Sbjct: 480 EHLVTRPEVAAYDYR-APKNVE 500
>gi|195440550|ref|XP_002068104.1| GK10486 [Drosophila willistoni]
gi|194164189|gb|EDW79090.1| GK10486 [Drosophila willistoni]
Length = 334
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/132 (44%), Positives = 78/132 (59%), Gaps = 1/132 (0%)
Query: 6 GMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFKLIERV 65
G EQRCRLSIM Q W + +F IPGKAF+PKPQVDVGVV P P LPF L+ERV
Sbjct: 188 GSEQRCRLSIMSQIWTDPKLKFIIPGKAFVPKPQVDVGVVKLIPLKRPKTQLPFDLVERV 247
Query: 66 VSCIFRYRQKQVYKP-ASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQICLAYR 124
+ IF RQK + ++LL P+ + + L RA V +RP++LSV E ++ Y
Sbjct: 248 MRHIFSMRQKYCRRGFSNLLPPELREEQTPELFRRADVVDTMRPFELSVDECVRLAEVYA 307
Query: 125 DMCEEMPGLYEY 136
+ + P + Y
Sbjct: 308 EYIKSNPEVAHY 319
>gi|383861168|ref|XP_003706058.1| PREDICTED: dimethyladenosine transferase 1, mitochondrial-like
[Megachile rotundata]
Length = 351
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/139 (43%), Positives = 82/139 (58%), Gaps = 3/139 (2%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A EQRCRLS+M Q W F IPG AFIPKP+VDVGVV F P V P FK
Sbjct: 181 IVAEPMTEQRCRLSVMAQAWTRPILHFIIPGTAFIPKPKVDVGVVSFAPMVIPRTQHEFK 240
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKR-QLVVSLLERACVKPILRPYQLSVQEFGQI 119
+ E+V IF +RQK + LFP R +L + E + ++P LRP QL+V++ ++
Sbjct: 241 IFEKVTRQIFGFRQKYSIRGIETLFPLECRVELGRKMYELSNLEPKLRPTQLTVEDIDKL 300
Query: 120 CLAYRDMCEEMPGL--YEY 136
AY+ + E+ P + YEY
Sbjct: 301 VTAYKYLLEKHPEIRSYEY 319
>gi|391348349|ref|XP_003748410.1| PREDICTED: dimethyladenosine transferase 1, mitochondrial-like
[Metaseiulus occidentalis]
Length = 345
Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 81/130 (62%), Gaps = 1/130 (0%)
Query: 9 QRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFKLIERVVSC 68
++CRLSI+ Q +C V+ FTI G +F+P P VDVGVV PRV P+ + F L+E+V+ C
Sbjct: 196 EKCRLSIISQGYCEVEECFTIVGGSFVPPPLVDVGVVKLVPRVKPVFNQDFSLVEKVLRC 255
Query: 69 IFRYRQKQVYKPASLLFPK-RKRQLVVSLLERACVKPILRPYQLSVQEFGQICLAYRDMC 127
+F ++K V + LFP+ + +LE+A + P + L+ QEF ++C Y + C
Sbjct: 256 MFNAKRKTVEQNLPKLFPQPLLDDIKHDVLEKAELDPKEQTLMLTTQEFSRLCDVYAEYC 315
Query: 128 EEMPGLYEYT 137
E++ GLYEY
Sbjct: 316 EKVAGLYEYN 325
>gi|83025311|gb|ABB95748.1| mitochondrial transcription factor B1, partial [Tigriopus
californicus]
Length = 355
Score = 105 bits (261), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 76/139 (54%), Gaps = 1/139 (0%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+IA G R RLS++CQN+ ++T+ G +F+P VDVGV+ P P IDLPF
Sbjct: 172 IIAQPGDRNRSRLSVLCQNYAQARLKYTLKGGSFVPAASVDVGVMTLLPLRQPYIDLPFN 231
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERAC-VKPILRPYQLSVQEFGQI 119
+E+V + +F +QK V K LFP + R +L C + P L + +F +I
Sbjct: 232 FLEKVFTSLFHGKQKTVRKTIGHLFPNQNRLERADILLSTCRIHPNRTAVSLDMNDFEKI 291
Query: 120 CLAYRDMCEEMPGLYEYTL 138
Y+DMC++ P L +Y L
Sbjct: 292 AFTYKDMCDKEPRLKKYVL 310
>gi|195016027|ref|XP_001984325.1| GH15074 [Drosophila grimshawi]
gi|193897807|gb|EDV96673.1| GH15074 [Drosophila grimshawi]
Length = 415
Score = 104 bits (260), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 61/137 (44%), Positives = 80/137 (58%), Gaps = 3/137 (2%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFKLI 62
A G EQRCRLS+M Q W +F IPGKAF+PKPQVDVGVV P P LPF L+
Sbjct: 269 AQLGSEQRCRLSVMSQIWTQPLLKFIIPGKAFVPKPQVDVGVVKVMPLKQPKTQLPFALV 328
Query: 63 ERVVSCIFRYRQKQVYKP-ASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQICL 121
ERVV IF RQK + +LL P + ++ +L + A V+ LRP++LSV E ++
Sbjct: 329 ERVVRHIFSMRQKYCRRGFGTLLPPDGREEITHNLFQLADVQDTLRPFELSVAECLRLAD 388
Query: 122 AYRDMCEEMPGL--YEY 136
Y + P + Y+Y
Sbjct: 389 VYAEHVAAHPEVACYDY 405
>gi|83583584|gb|ABC24676.1| mitochondrial transcription factor B1 [Tigriopus californicus]
Length = 365
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 76/139 (54%), Gaps = 1/139 (0%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+IA G R RLS++CQN+ ++T+ G +F+P VDVGV+ P P IDLPF
Sbjct: 182 IIAQPGDRNRSRLSVLCQNFAQARLKYTLKGGSFVPAASVDVGVMTLLPLRQPYIDLPFN 241
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERAC-VKPILRPYQLSVQEFGQI 119
+E+V + +F +QK V K LFP + R +L C + P L + +F +I
Sbjct: 242 FLEKVFTSLFHGKQKTVRKTIGHLFPNQNRLERADILLSTCRIHPNRTAVSLDMNDFEKI 301
Query: 120 CLAYRDMCEEMPGLYEYTL 138
Y+DMC++ P L +Y L
Sbjct: 302 AFTYKDMCDKEPRLKKYVL 320
>gi|83025301|gb|ABB95743.1| mitochondrial transcription factor B1, partial [Tigriopus
californicus]
gi|83025303|gb|ABB95744.1| mitochondrial transcription factor B1, partial [Tigriopus
californicus]
Length = 355
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 76/139 (54%), Gaps = 1/139 (0%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+IA G R RLS++CQN+ ++T+ G +F+P VDVGV+ P P IDLPF
Sbjct: 172 IIAQPGDRNRSRLSVLCQNFAQARLKYTLKGGSFVPAASVDVGVMTLLPLRQPYIDLPFN 231
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERAC-VKPILRPYQLSVQEFGQI 119
+E+V + +F +QK V K LFP + R +L C + P L + +F +I
Sbjct: 232 FLEKVFTSLFHGKQKTVRKTIGHLFPNQNRLERADILLSTCRIHPNRTAVSLDMNDFEKI 291
Query: 120 CLAYRDMCEEMPGLYEYTL 138
Y+DMC++ P L +Y L
Sbjct: 292 AFTYKDMCDKEPRLKKYVL 310
>gi|83025305|gb|ABB95745.1| mitochondrial transcription factor B1, partial [Tigriopus
californicus]
Length = 355
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 76/139 (54%), Gaps = 1/139 (0%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+IA G R RLS++CQN+ ++T+ G +F+P VDVGV+ P P IDLPF
Sbjct: 172 IIAQPGDRNRSRLSVLCQNFAQARLKYTLKGGSFVPAASVDVGVMTLLPLRQPYIDLPFN 231
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERAC-VKPILRPYQLSVQEFGQI 119
+E+V + +F +QK V K LFP + R +L C + P L + +F +I
Sbjct: 232 FLEKVFTSLFHGKQKTVRKTIGHLFPNQNRLERADILLSTCRIHPNRTAVSLDMNDFEKI 291
Query: 120 CLAYRDMCEEMPGLYEYTL 138
Y+DMC++ P L +Y L
Sbjct: 292 AFTYKDMCDKEPRLKKYVL 310
>gi|83025299|gb|ABB95742.1| mitochondrial transcription factor B1, partial [Tigriopus
californicus]
Length = 355
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 76/139 (54%), Gaps = 1/139 (0%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+IA G R RLS++CQN+ ++T+ G +F+P VDVGV+ P P IDLPF
Sbjct: 172 IIARPGDRNRSRLSVLCQNFAQARLKYTLKGGSFVPAASVDVGVMTLLPLRQPYIDLPFN 231
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERAC-VKPILRPYQLSVQEFGQI 119
+E+V + +F +QK V K LFP + R +L C + P L + +F +I
Sbjct: 232 FLEKVFTSLFHGKQKTVRKTIGHLFPNQNRLERADILLSTCRIHPNRTAVSLDMNDFEKI 291
Query: 120 CLAYRDMCEEMPGLYEYTL 138
Y+DMC++ P L +Y L
Sbjct: 292 AFTYKDMCDKEPRLKKYVL 310
>gi|195506441|ref|XP_002087207.1| GE14674 [Drosophila yakuba]
gi|194186922|gb|EDX00506.1| GE14674 [Drosophila yakuba]
Length = 160
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/132 (44%), Positives = 76/132 (57%), Gaps = 1/132 (0%)
Query: 6 GMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFKLIERV 65
G EQRCRLS+M Q W +FTIPGKAF+PKPQVDVGVV P P LPF L+ERV
Sbjct: 18 GGEQRCRLSVMSQVWTEPVMKFTIPGKAFVPKPQVDVGVVKLIPLKRPKTQLPFPLVERV 77
Query: 66 VSCIFRYRQKQVYKPASLLFPKRKRQLVV-SLLERACVKPILRPYQLSVQEFGQICLAYR 124
V IF RQK + L P R+ V L +RA V+ LR ++L+V++ ++ Y
Sbjct: 78 VRHIFSMRQKYCRRGFGTLLPPEDREDVTQKLFQRAEVQDTLRSFELTVEQCLRLAEVYS 137
Query: 125 DMCEEMPGLYEY 136
+ P + Y
Sbjct: 138 EHLVTRPEVAAY 149
>gi|195493555|ref|XP_002094468.1| GE21840 [Drosophila yakuba]
gi|194180569|gb|EDW94180.1| GE21840 [Drosophila yakuba]
Length = 207
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/132 (44%), Positives = 76/132 (57%), Gaps = 1/132 (0%)
Query: 6 GMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFKLIERV 65
G EQRCRLS+M Q W +FTIPGKAF+PKPQVDVGVV P P LPF L+ERV
Sbjct: 65 GGEQRCRLSVMSQVWTEPVMKFTIPGKAFVPKPQVDVGVVKLIPLKRPKTQLPFPLVERV 124
Query: 66 VSCIFRYRQKQVYKPASLLFPKRKRQLVV-SLLERACVKPILRPYQLSVQEFGQICLAYR 124
V IF RQK + L P R+ V L +RA V+ LR ++L+V++ ++ Y
Sbjct: 125 VRHIFSMRQKYCRRGFGTLLPPEDREDVTQKLFQRAEVQDTLRSFELTVEQCLRLAEVYS 184
Query: 125 DMCEEMPGLYEY 136
+ P + Y
Sbjct: 185 EHLVTRPEVAAY 196
>gi|83025313|gb|ABB95749.1| mitochondrial transcription factor B1, partial [Tigriopus
californicus]
Length = 355
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 77/139 (55%), Gaps = 1/139 (0%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+IA G R RLS++CQN+ ++T+ G +F+P VDVGV+ P P IDLPF
Sbjct: 172 IIAQPGDRNRSRLSVLCQNYAQARLKYTLKGGSFVPAASVDVGVMTLLPLRQPYIDLPFN 231
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERAC-VKPILRPYQLSVQEFGQI 119
+E+V + +F +QK V K LFP + R +L C ++P L + +F +I
Sbjct: 232 FLEKVFTSLFHGKQKTVRKTIGHLFPNQNRLERADILLSTCRIQPNRTAVSLDMNDFEKI 291
Query: 120 CLAYRDMCEEMPGLYEYTL 138
Y+DMC++ P L ++ L
Sbjct: 292 AFTYKDMCDKEPRLKKFVL 310
>gi|83025297|gb|ABB95741.1| mitochondrial transcription factor B1, partial [Tigriopus
californicus]
Length = 355
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 76/139 (54%), Gaps = 1/139 (0%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+IA G R RLS++CQN+ ++T+ G +F+P VDVGV+ P P IDLPF
Sbjct: 172 IIARPGDRNRSRLSVLCQNFAQARLKYTLKGGSFVPAASVDVGVMTLLPLRQPYIDLPFN 231
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERAC-VKPILRPYQLSVQEFGQI 119
+E+V + +F +QK V K LFP + R +L C + P L + +F +I
Sbjct: 232 FLEKVFTSLFHGKQKXVRKTIGHLFPNQNRLERAXILLSTCRIHPNRTAVSLDMNDFEKI 291
Query: 120 CLAYRDMCEEMPGLYEYTL 138
Y+DMC++ P L +Y L
Sbjct: 292 AFTYKDMCDKEPRLKKYVL 310
>gi|83025307|gb|ABB95746.1| mitochondrial transcription factor B1, partial [Tigriopus
californicus]
Length = 355
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 76/139 (54%), Gaps = 1/139 (0%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+IA G R RLS++CQN+ ++T+ G +F+P VDVGV+ P P IDLPF
Sbjct: 172 IIAPPGDRNRSRLSVLCQNFAQARLKYTLKGGSFVPAASVDVGVMTLLPLRQPYIDLPFN 231
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERAC-VKPILRPYQLSVQEFGQI 119
+E+V + +F +QK V K LFP + R +L C + P L + +F +I
Sbjct: 232 FLEKVFTSLFHGKQKTVRKTIGHLFPNQNRLERADILLSTCRIHPNRTAVSLDMNDFEKI 291
Query: 120 CLAYRDMCEEMPGLYEYTL 138
Y+DMC++ P L +Y L
Sbjct: 292 AFTYKDMCDKEPRLKKYVL 310
>gi|291238518|ref|XP_002739171.1| PREDICTED: tfb1m protein-like [Saccoglossus kowalevskii]
Length = 259
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 58/75 (77%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A G QR RLSIM Q+ C V H FTIPG AF+PKP VDVGVVHFTP + P+I PFK
Sbjct: 178 LVAGVGDPQRSRLSIMSQHLCKVKHAFTIPGTAFVPKPDVDVGVVHFTPLIDPLIQQPFK 237
Query: 61 LIERVVSCIFRYRQK 75
L+E+VV C+F++R+K
Sbjct: 238 LVEKVVRCLFQFRRK 252
>gi|196005549|ref|XP_002112641.1| hypothetical protein TRIADDRAFT_24833 [Trichoplax adhaerens]
gi|190584682|gb|EDV24751.1| hypothetical protein TRIADDRAFT_24833 [Trichoplax adhaerens]
Length = 319
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 75/124 (60%), Gaps = 1/124 (0%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A QR RLSIM QN+C+V F I G +F+P P+V+ V+ FTPR+ P+ID+ F
Sbjct: 176 ILAEPKTSQRSRLSIMTQNYCHVKPGFLIKGSSFVPAPKVNSVVLTFTPRITPLIDIDFT 235
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
+E + +FR+R+K V K LFP L + L E A V LRP QLS +E ++C
Sbjct: 236 TLEVIAKSLFRHRRKFVIKGTKYLFPT-DVDLSLKLFEEADVDWKLRPQQLSTEEIQRLC 294
Query: 121 LAYR 124
AY+
Sbjct: 295 AAYK 298
>gi|312372402|gb|EFR20370.1| hypothetical protein AND_20209 [Anopheles darlingi]
Length = 353
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 87/155 (56%), Gaps = 3/155 (1%)
Query: 8 EQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFKLIERVVS 67
+QRCRLS+M Q W D RF I G+AF+PKP+VDVGVV P P+ + F +E+V+
Sbjct: 200 DQRCRLSVMNQIWSKPDLRFMISGRAFVPKPEVDVGVVTIVPLQTPLTQVHFDTVEKVIR 259
Query: 68 CIFRYRQKQVYKPASLLFPKRKRQLVVSL-LERACVKPILRPYQLSVQEFGQICLAYRDM 126
IF RQK + S L+P R + L ++ V P+ R +QLSV E +I AY ++
Sbjct: 260 HIFSMRQKYCRRGVSNLYPPTVRDELTELTFRKSSVDPLSRSFQLSVDECLRIVEAYDEL 319
Query: 127 CEEMPGLYEYTLEDTPGDIEPEAVAEQEGEGDEID 161
++ P + Y + E VA+ + +G EID
Sbjct: 320 LQQHPEIRGYDYRAAKSKVARE-VADTD-DGTEID 352
>gi|170043732|ref|XP_001849529.1| mitochondrial dimethyladenosine transferase 1 [Culex
quinquefasciatus]
gi|167867055|gb|EDS30438.1| mitochondrial dimethyladenosine transferase 1 [Culex
quinquefasciatus]
Length = 345
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 78/131 (59%), Gaps = 1/131 (0%)
Query: 8 EQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFKLIERVVS 67
E+RCRLS+M Q W + +F IPGKAF+PKP VDVGVV P +P+ +PF ++E+VV
Sbjct: 198 ERRCRLSVMNQIWSRPELKFIIPGKAFVPKPDVDVGVVTIVPLKNPLTTVPFPVVEKVVR 257
Query: 68 CIFRYRQKQVYKPASLLFPKRKRQLVVSL-LERACVKPILRPYQLSVQEFGQICLAYRDM 126
IF RQK + + L+P R + L + A V P+ R +QLS +E +I AY +
Sbjct: 258 HIFSMRQKYCRRGVANLYPPELRDELTELTFKIADVDPLARSFQLSTEECLRIVEAYDRL 317
Query: 127 CEEMPGLYEYT 137
+E P + Y
Sbjct: 318 VQEHPDIEHYN 328
>gi|198433957|ref|XP_002130387.1| PREDICTED: similar to transcription factor B1, mitochondrial [Ciona
intestinalis]
Length = 384
Score = 101 bits (252), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 88/163 (53%), Gaps = 4/163 (2%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+A G +QRCRLS+ QN+C++D++F I G +F+P P+V+VGVV P+ I+LPFK
Sbjct: 199 FLAQTGDKQRCRLSVSAQNFCDIDYKFIIAGGSFVPPPKVEVGVVKIVPKKTFDINLPFK 258
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
I+ VV + K +FP ++ LV + ++ V P+ R +L F +C
Sbjct: 259 KIDYVVKHTMHRKSKYCKHSVKTMFPPKRSDLVDEIFRKSGVDPLTRSNELENLHFRDLC 318
Query: 121 LAYRDMCEEMPGLYEYTLEDTPGDIE-PEAVAEQEGEGDEIDF 162
AY ++ + +P L + DT G+ E + + G ++ F
Sbjct: 319 YAYEEIADRIPNLRKV---DTYGENEWSKTYFDANGNAKDVLF 358
>gi|118792585|ref|XP_320403.3| AGAP012129-PA [Anopheles gambiae str. PEST]
gi|116116968|gb|EAA00207.3| AGAP012129-PA [Anopheles gambiae str. PEST]
Length = 424
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 75/130 (57%), Gaps = 1/130 (0%)
Query: 8 EQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFKLIERVVS 67
+QRCRLS+M Q W + RF I G+AF+PKP+VDVGVV P P+ + F +E+VV
Sbjct: 284 DQRCRLSVMNQIWSTPELRFMISGRAFVPKPEVDVGVVTIVPLQTPLTQVHFDTVEKVVR 343
Query: 68 CIFRYRQKQVYKPASLLFPKRKR-QLVVSLLERACVKPILRPYQLSVQEFGQICLAYRDM 126
IF RQK + + L+P R +L +RA V P+ R +QLSV E +I AY +
Sbjct: 344 HIFSMRQKYCRRGVANLYPPAVREELTEQTFKRADVDPLARSFQLSVAECLRIVEAYDGL 403
Query: 127 CEEMPGLYEY 136
E P + Y
Sbjct: 404 VRERPEIAAY 413
>gi|83025309|gb|ABB95747.1| mitochondrial transcription factor B1, partial [Tigriopus
californicus]
Length = 355
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 73/139 (52%), Gaps = 1/139 (0%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+IA G R RLS++CQN+ ++T+ G +P VDVGV+ P P IDLPF
Sbjct: 172 IIAQPGDRNRSRLSVLCQNFAQARLKYTLKGGXXVPAASVDVGVMTLLPLRQPYIDLPFN 231
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERAC-VKPILRPYQLSVQEFGQI 119
+E+V + +F +QK V K LFP R +L C + P L + +F +I
Sbjct: 232 FLEKVFTSLFHGKQKTVRKTIGHLFPNXNRLERADILLSTCRIHPNRTAVSLDMNDFEKI 291
Query: 120 CLAYRDMCEEMPGLYEYTL 138
Y+DMC++ P L +Y L
Sbjct: 292 AFTYKDMCDKEPRLKKYVL 310
>gi|221106688|ref|XP_002161204.1| PREDICTED: dimethyladenosine transferase 1, mitochondrial-like
[Hydra magnipapillata]
Length = 328
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 84/153 (54%), Gaps = 6/153 (3%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
M+A R RL+IM QN+C+V I F+P+P+VD ++HF P P ID PF
Sbjct: 182 MVAEALNYDRSRLAIMAQNYCHVSRAMEISSSVFVPEPKVDAWLMHFIPLKKPAIDAPFN 241
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
++E+VV IF R+K + P LFP+ +R L LL+R + LRP+QL + +F I
Sbjct: 242 VVEQVVKAIFSKRRKIIKTPLRRLFPENER-LADELLDRIKLDTNLRPHQLELHDFNLIT 300
Query: 121 LAYRDMCEEMPGLYEYTLEDTPGDIEPEAVAEQ 153
+ +C E +Y+L P + +P+ + +
Sbjct: 301 KEFMKICNE----NDYSLTPLPVN-KPDKIVNE 328
>gi|339243091|ref|XP_003377471.1| putative C2 domain protein [Trichinella spiralis]
gi|316973725|gb|EFV57284.1| putative C2 domain protein [Trichinella spiralis]
Length = 1392
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 75/137 (54%), Gaps = 1/137 (0%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
M+A RCRLS+MCQ +V +FTIPG+A +P P VDV V+ F P+V P+I F
Sbjct: 1220 MLAPIFNRHRCRLSVMCQYLSDVKRKFTIPGRACVPSPDVDVAVMQFRPKVTPVIPHHFD 1279
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPK-RKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
L+E+ +F YR K + LFP K+ +L A V P L P L+++E +
Sbjct: 1280 LVEKFCRHVFHYRNKYCIRGIETLFPDFLKKDFSHEILRFARVSPKLAPPALAIEEIRDM 1339
Query: 120 CLAYRDMCEEMPGLYEY 136
C Y + C +P L+ Y
Sbjct: 1340 CKIYEEQCLRVPSLFYY 1356
>gi|157123560|ref|XP_001660203.1| dimethyladenosine transferase [Aedes aegypti]
gi|108874371|gb|EAT38596.1| AAEL009534-PA [Aedes aegypti]
Length = 339
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 75/130 (57%), Gaps = 1/130 (0%)
Query: 8 EQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFKLIERVVS 67
E RCRLS+M Q W + +F IPGKAF+PKP VDVGVV P P+ + F ++E+V+
Sbjct: 198 EYRCRLSVMNQVWSKAELKFIIPGKAFVPKPDVDVGVVTIIPLKTPLTTVHFDVVEKVIR 257
Query: 68 CIFRYRQKQVYKPASLLFPKRKRQLVVSLLER-ACVKPILRPYQLSVQEFGQICLAYRDM 126
IF RQK + S L+P R+ + L R A V P+ R +QLS +E +I AY +
Sbjct: 258 HIFSMRQKYCRRGVSNLYPPDVREDLTQLTFRMADVDPLARSFQLSTEECLRIAEAYDQL 317
Query: 127 CEEMPGLYEY 136
+ P + Y
Sbjct: 318 VQANPEIKHY 327
>gi|350420423|ref|XP_003492503.1| PREDICTED: dimethyladenosine transferase 1, mitochondrial-like
[Bombus impatiens]
Length = 341
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 84/156 (53%), Gaps = 11/156 (7%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+IA QRCRLS+M Q W F IPG +F+PKP VDVGVV F P P F
Sbjct: 181 LIAEPSDLQRCRLSVMAQAWTKPILHFIIPGSSFVPKPDVDVGVVTFVPLTVPRTKHEFT 240
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFP-KRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
+ E+V IF +RQK + LFP + +++L + + + + P RP QL+V++ ++
Sbjct: 241 IFEKVTRHIFSFRQKYSIRGIETLFPLEYRKELGQMMYKLSDLNPQTRPMQLTVEDIDKL 300
Query: 120 CLAYRDMCEEMP--GLYEY-------TLEDTPGDIE 146
AY+ + E+ P YEY +L DT DIE
Sbjct: 301 VSAYKYLLEKHPEISFYEYRASRRIVSLSDT-KDIE 335
>gi|431904535|gb|ELK09917.1| Dimethyladenosine transferase 1, mitochondrial [Pteropus alecto]
Length = 124
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 66/103 (64%), Gaps = 1/103 (0%)
Query: 39 QVDVGVVHFTPRVHPIIDLPFKLIERVVSCIFRYRQKQVYKPASLLFPKRKR-QLVVSLL 97
+VDVGVVHFTP P I PFKL+E+VV +F++R+K ++ +LFP+ +R + LL
Sbjct: 2 KVDVGVVHFTPLTQPRIAQPFKLVEKVVQNVFQFRRKFCHRGLGMLFPETQRLESTGKLL 61
Query: 98 ERACVKPILRPYQLSVQEFGQICLAYRDMCEEMPGLYEYTLED 140
E A V P LRP QLSV F +C YR MC+E P L+ Y +
Sbjct: 62 ELADVDPTLRPRQLSVSHFKNLCDVYRKMCDEDPHLFAYNFRE 104
>gi|170575593|ref|XP_001893303.1| ribosomal RNA adenine dimethylase family protein [Brugia malayi]
gi|158600773|gb|EDP37864.1| ribosomal RNA adenine dimethylase family protein [Brugia malayi]
Length = 364
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 71/128 (55%), Gaps = 1/128 (0%)
Query: 10 RCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFKLIERVVSCI 69
R R+SIM F IPG+ F+P P+V+VGVV F PR P+I F+++E+V I
Sbjct: 192 RARISIMSAFVTEPKLLFQIPGRCFVPSPKVNVGVVRFVPRQDPLIKTSFEVVEKVCRRI 251
Query: 70 FRYRQKQVYKPASLLFPKR-KRQLVVSLLERACVKPILRPYQLSVQEFGQICLAYRDMCE 128
F YRQK V K L+PK + L LL+R + P L V++F IC Y + C
Sbjct: 252 FNYRQKYVIKGVRTLYPKELAKHLADDLLKRCRIDPTTTAICLGVEQFADICYVYEEHCR 311
Query: 129 EMPGLYEY 136
+ PG++ Y
Sbjct: 312 KYPGVFLY 319
>gi|340709435|ref|XP_003393315.1| PREDICTED: dimethyladenosine transferase 1, mitochondrial-like
[Bombus terrestris]
Length = 341
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 82/156 (52%), Gaps = 11/156 (7%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A QRCRLS+M Q W F IPG +F+PKP VDVGVV F P P F
Sbjct: 181 LVAQPSDSQRCRLSVMAQAWTKPILHFIIPGSSFVPKPNVDVGVVTFIPLTIPRTKHEFT 240
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLER-ACVKPILRPYQLSVQEFGQI 119
+ E+V IF +RQK + LFP R+ ++ + + + P RP QL+V++ ++
Sbjct: 241 IFEKVTRHIFSFRQKYSVRGIETLFPLEYRKEFGQMMYKLSDLDPQTRPMQLTVEDIDKL 300
Query: 120 CLAYRDMCEEMP--GLYEY-------TLEDTPGDIE 146
AY+ + E+ P YEY +L DT DIE
Sbjct: 301 VSAYKYLLEKHPEISFYEYRASRRIVSLSDT-KDIE 335
>gi|324517882|gb|ADY46945.1| Dimethyladenosine transferase 1 [Ascaris suum]
Length = 362
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 75/133 (56%), Gaps = 3/133 (2%)
Query: 8 EQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFKLIERVVS 67
E R R+SIM F IPG F+PKP+++VGVV F PR+ P+I F+++E++
Sbjct: 189 EVRARISIMSTFVSEPKILFEIPGSCFVPKPKINVGVVRFIPRIEPLIKSAFEVVEKICR 248
Query: 68 CIFRYRQKQVYKPASLLFPKRKRQLVVSLLERAC-VKPILRPYQLSVQEFGQICLAYRDM 126
IF YRQK V K L+P+ + + L C + P +L V++F IC AY +
Sbjct: 249 HIFHYRQKYVIKCVRTLYPESLAESLSHELLSVCRIDPSTISIKLGVEQFADICYAYEEQ 308
Query: 127 CEEMPG--LYEYT 137
C+ PG LY+YT
Sbjct: 309 CKRYPGLFLYDYT 321
>gi|380023715|ref|XP_003695658.1| PREDICTED: dimethyladenosine transferase 1, mitochondrial-like
[Apis florea]
Length = 341
Score = 95.1 bits (235), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 74/131 (56%), Gaps = 3/131 (2%)
Query: 9 QRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFKLIERVVSC 68
QRCRLS+M Q W + F IPG AFIPKP+VDVG+V F P P F + E+V
Sbjct: 189 QRCRLSVMAQAWTHPILHFIIPGTAFIPKPKVDVGLVTFIPLTIPRTKHEFTIFEKVTRH 248
Query: 69 IFRYRQKQVYKPASLLFPKRKR-QLVVSLLERACVKPILRPYQLSVQEFGQICLAYRDMC 127
IF +RQK + LFP R +L + + A + P RP +L++++ + AY+ +
Sbjct: 249 IFSFRQKYSIRGVETLFPLEYRTELAQMMYKLADLNPQTRPVELTIEDIDNLITAYKYLL 308
Query: 128 EEMPGL--YEY 136
E+ P + Y+Y
Sbjct: 309 EKHPDIEFYDY 319
>gi|402586200|gb|EJW80138.1| ribosomal RNA adenine dimethylase [Wuchereria bancrofti]
Length = 364
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 71/128 (55%), Gaps = 1/128 (0%)
Query: 10 RCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFKLIERVVSCI 69
R R+SIM F IPG+ F+P P+V+VGVV F PR P+I F+++E+V I
Sbjct: 192 RARISIMSAFVTEPKLLFQIPGRCFVPPPKVNVGVVRFIPRQDPLIKTSFEVVEKVCRRI 251
Query: 70 FRYRQKQVYKPASLLFPKR-KRQLVVSLLERACVKPILRPYQLSVQEFGQICLAYRDMCE 128
F YRQK V K L+PK + L LL+R + P L V++F IC Y + C
Sbjct: 252 FNYRQKYVIKGVRSLYPKELAKNLADDLLKRCRIDPTTTAICLGVEQFADICYVYEEHCR 311
Query: 129 EMPGLYEY 136
+ PG++ Y
Sbjct: 312 KYPGVFLY 319
>gi|444732455|gb|ELW72747.1| Dimethyladenosine transferase 1, mitochondrial [Tupaia chinensis]
Length = 307
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 66/103 (64%), Gaps = 1/103 (0%)
Query: 39 QVDVGVVHFTPRVHPIIDLPFKLIERVVSCIFRYRQKQVYKPASLLFPKRKR-QLVVSLL 97
+VDVGVVHFTP P I+ PFKL+E+VV F++R+K+ Y+ +LFP+ +R + LL
Sbjct: 182 EVDVGVVHFTPLRQPKIEQPFKLVEKVVQNTFQFRRKRCYRGLGMLFPEAQRVESTGRLL 241
Query: 98 ERACVKPILRPYQLSVQEFGQICLAYRDMCEEMPGLYEYTLED 140
A V P LRP QLS+ F +C YR MC+E P L+ Y +
Sbjct: 242 RLADVDPTLRPSQLSLSHFKSLCDVYRMMCDEDPHLFAYNFRE 284
>gi|344239863|gb|EGV95966.1| NADPH oxidase 3 [Cricetulus griseus]
Length = 501
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 65/102 (63%), Gaps = 1/102 (0%)
Query: 40 VDVGVVHFTPRVHPIIDLPFKLIERVVSCIFRYRQKQVYKPASLLFPKRKR-QLVVSLLE 98
VDVGVVHFTP + P I+ PFKL+E+VV F++R+K ++ +LFPK +R + LL+
Sbjct: 380 VDVGVVHFTPLIQPKIEQPFKLVEKVVQYAFQFRRKYCHQGLGMLFPKAQRLENTGKLLQ 439
Query: 99 RACVKPILRPYQLSVQEFGQICLAYRDMCEEMPGLYEYTLED 140
A + P LRP LS+ F +C YR MC+E P L+ Y +
Sbjct: 440 LADIDPTLRPIHLSLMHFKSLCDVYRKMCDEDPQLFTYNFRE 481
>gi|328792787|ref|XP_001121333.2| PREDICTED: dimethyladenosine transferase 1, mitochondrial [Apis
mellifera]
Length = 343
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 73/131 (55%), Gaps = 3/131 (2%)
Query: 9 QRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFKLIERVVSC 68
QRCRLS+M Q W + F IPG AFIPKP+VDVG+V F P P F + E+V
Sbjct: 189 QRCRLSVMAQAWTHPVLHFIIPGTAFIPKPKVDVGLVTFVPLTIPRTKHEFSIFEKVTRH 248
Query: 69 IFRYRQKQVYKPASLLFPKRKR-QLVVSLLERACVKPILRPYQLSVQEFGQICLAYRDMC 127
IF +RQK + LFP R +L + + + + P RP +L+++ + AY+ +
Sbjct: 249 IFSFRQKYGIRGVETLFPLEYRTELAQMMYKLSDLNPQTRPVELTIENIDNLISAYKYLL 308
Query: 128 EEMPG--LYEY 136
E+ P LY+Y
Sbjct: 309 EKHPDIKLYDY 319
>gi|358332771|dbj|GAA51388.1| mitochondrial dimethyladenosine transferase 1 [Clonorchis sinensis]
Length = 444
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 66/113 (58%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A EQR RLS+M Q +C V IPG AF+P+PQVD +V P P+I + F
Sbjct: 271 LVADVWDEQRSRLSVMAQAYCEVKFMEEIPGSAFLPRPQVDAAIVRLVPLSQPLIPVAFP 330
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSV 113
+E++V F +R KQV LFP + +LV+ L + A V+P+ RP Q++
Sbjct: 331 YVEKLVRAAFHFRTKQVVHGLETLFPSNRPELVIRLFKEAGVQPVKRPTQVTA 383
>gi|25141369|ref|NP_491242.2| Protein T03F1.7 [Caenorhabditis elegans]
gi|74961647|sp|P91424.2|TFB1M_CAEEL RecName: Full=Dimethyladenosine transferase 1, mitochondrial;
AltName: Full=Mitochondrial 12S rRNA dimethylase 1;
AltName: Full=Mitochondrial transcription factor B1;
AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase 1; Flags:
Precursor
gi|351060163|emb|CCD67792.1| Protein T03F1.7 [Caenorhabditis elegans]
Length = 367
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 77/140 (55%), Gaps = 1/140 (0%)
Query: 8 EQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFKLIERVVS 67
+ R R+SIM Q F I G F+P+PQVDVGVV F PR P+++ F+++E+V
Sbjct: 191 DTRSRISIMSQYVAEPKMVFQISGSCFVPRPQVDVGVVRFVPRKTPLVNTSFEVLEKVCR 250
Query: 68 CIFRYRQKQVYKPASLLFPKR-KRQLVVSLLERACVKPILRPYQLSVQEFGQICLAYRDM 126
+F YRQK V K L+P+ + +L LL++ + P +L +++F + Y +
Sbjct: 251 QVFHYRQKYVTKGLKTLYPEELEDELSDDLLKKCRIDPTTTSIRLGIEQFADLAEGYNEQ 310
Query: 127 CEEMPGLYEYTLEDTPGDIE 146
C PGL+ Y + ++E
Sbjct: 311 CIRYPGLFLYDYTNKLHNLE 330
>gi|115529417|ref|NP_001070237.1| dimethyladenosine transferase 1, mitochondrial [Danio rerio]
gi|115313290|gb|AAI24403.1| Zgc:153625 [Danio rerio]
gi|182891088|gb|AAI65534.1| Zgc:153625 protein [Danio rerio]
Length = 269
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A+ G QR RLS+M Q V FTIPG+AF+PKP VDVGVVHFTP P I PFK
Sbjct: 184 LTASTGSRQRSRLSVMAQYLTTVKSCFTIPGQAFVPKPNVDVGVVHFTPLAQPQIQQPFK 243
Query: 61 LIERVVSCIFRYRQKQ 76
L+E++V F++R+K
Sbjct: 244 LVEKIVKNAFQFRRKH 259
>gi|341896697|gb|EGT52632.1| hypothetical protein CAEBREN_15754 [Caenorhabditis brenneri]
Length = 364
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 75/140 (53%), Gaps = 1/140 (0%)
Query: 8 EQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFKLIERVVS 67
+ R R+SIM Q F I G F+P+PQVDVGVV F PR P++ F+++E++
Sbjct: 189 DTRSRISIMAQYVTEPKMVFQISGSCFVPRPQVDVGVVRFVPRKTPLVKTSFEVLEKLCR 248
Query: 68 CIFRYRQKQVYKPASLLF-PKRKRQLVVSLLERACVKPILRPYQLSVQEFGQICLAYRDM 126
+F YRQK V K L+ P+ + +L L ++ V P +L +++F + Y +
Sbjct: 249 QVFHYRQKYVEKGLKTLYPPELENELADELFKKCRVDPTTTSIRLGIEQFADLAEGYNEQ 308
Query: 127 CEEMPGLYEYTLEDTPGDIE 146
C PGL+ Y + ++E
Sbjct: 309 CIRHPGLFLYDYTNKQHNLE 328
>gi|268560678|ref|XP_002646265.1| Hypothetical protein CBG11970 [Caenorhabditis briggsae]
Length = 358
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 76/140 (54%), Gaps = 1/140 (0%)
Query: 8 EQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFKLIERVVS 67
+ R R+SIM Q F I G F+P+PQVDVGVV F PR P++ F+++E++
Sbjct: 187 DTRSRISIMAQYVAEPKLVFQISGSCFVPRPQVDVGVVRFVPRKTPLVKTSFEVLEKLCR 246
Query: 68 CIFRYRQKQVYKPASLLF-PKRKRQLVVSLLERACVKPILRPYQLSVQEFGQICLAYRDM 126
+F YRQK V K L+ P+ + ++ LL++ + P +L +++F + Y +
Sbjct: 247 QVFHYRQKYVEKGLKTLYPPEMENEMADELLKKCRIDPTTTSIKLGMEQFADLAEGYNEQ 306
Query: 127 CEEMPGLYEYTLEDTPGDIE 146
C PGL+ Y + ++E
Sbjct: 307 CIRHPGLFLYDYTNKQHNLE 326
>gi|308505052|ref|XP_003114709.1| hypothetical protein CRE_28029 [Caenorhabditis remanei]
gi|308258891|gb|EFP02844.1| hypothetical protein CRE_28029 [Caenorhabditis remanei]
Length = 363
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 76/140 (54%), Gaps = 1/140 (0%)
Query: 8 EQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFKLIERVVS 67
+ R R+SIM Q F I G F+P+PQVDVGVV F PR P++ F+++E++
Sbjct: 189 DTRSRISIMAQYVTEPKMVFQISGSCFVPRPQVDVGVVRFVPRKTPLVKTSFEVLEKLCR 248
Query: 68 CIFRYRQKQVYKPASLLF-PKRKRQLVVSLLERACVKPILRPYQLSVQEFGQICLAYRDM 126
+F YRQK V K L+ P+ + ++ LL++ V P +L +++F + Y +
Sbjct: 249 QVFHYRQKYVEKGLKTLYPPEMEDEMADELLKKCRVDPTTTSIRLGMEQFADLAEGYNEQ 308
Query: 127 CEEMPGLYEYTLEDTPGDIE 146
C PGL+ Y + ++E
Sbjct: 309 CIRHPGLFLYDYTNKHHNLE 328
>gi|393905480|gb|EJD73986.1| hypothetical protein LOAG_18635 [Loa loa]
Length = 655
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 65/121 (53%), Gaps = 1/121 (0%)
Query: 10 RCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFKLIERVVSCI 69
R R+SIM F IPG+ F+P P+V+VGVV F PR P+I F+++E+V +
Sbjct: 192 RARISIMSAFVTEPKLLFQIPGRCFVPSPKVNVGVVRFIPRQDPLIKTSFEVVEKVCRRV 251
Query: 70 FRYRQKQVYKPASLLFPKR-KRQLVVSLLERACVKPILRPYQLSVQEFGQICLAYRDMCE 128
F YRQK V K L+P+ + L LL R + P L V++F IC Y + C
Sbjct: 252 FNYRQKYVVKGIRSLYPEELAKNLADDLLRRCRIDPTTTAICLGVEQFADICYVYEEHCR 311
Query: 129 E 129
+
Sbjct: 312 K 312
>gi|393905481|gb|EJD73987.1| hypothetical protein, variant [Loa loa]
Length = 517
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 65/121 (53%), Gaps = 1/121 (0%)
Query: 10 RCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFKLIERVVSCI 69
R R+SIM F IPG+ F+P P+V+VGVV F PR P+I F+++E+V +
Sbjct: 54 RARISIMSAFVTEPKLLFQIPGRCFVPSPKVNVGVVRFIPRQDPLIKTSFEVVEKVCRRV 113
Query: 70 FRYRQKQVYKPASLLFPKR-KRQLVVSLLERACVKPILRPYQLSVQEFGQICLAYRDMCE 128
F YRQK V K L+P+ + L LL R + P L V++F IC Y + C
Sbjct: 114 FNYRQKYVVKGIRSLYPEELAKNLADDLLRRCRIDPTTTAICLGVEQFADICYVYEEHCR 173
Query: 129 E 129
+
Sbjct: 174 K 174
>gi|312085629|ref|XP_003144755.1| ribosomal RNA adenine dimethylase [Loa loa]
Length = 342
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 65/121 (53%), Gaps = 1/121 (0%)
Query: 10 RCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFKLIERVVSCI 69
R R+SIM F IPG+ F+P P+V+VGVV F PR P+I F+++E+V +
Sbjct: 192 RARISIMSAFVTEPKLLFQIPGRCFVPSPKVNVGVVRFIPRQDPLIKTSFEVVEKVCRRV 251
Query: 70 FRYRQKQVYKPASLLFPKR-KRQLVVSLLERACVKPILRPYQLSVQEFGQICLAYRDMCE 128
F YRQK V K L+P+ + L LL R + P L V++F IC Y + C
Sbjct: 252 FNYRQKYVVKGIRSLYPEELAKNLADDLLRRCRIDPTTTAICLGVEQFADICYVYEEHCR 311
Query: 129 E 129
+
Sbjct: 312 K 312
>gi|122095936|sp|Q1A705.1|TFB1M_HARVE RecName: Full=Dimethyladenosine transferase 1, mitochondrial;
AltName: Full=Mitochondrial 12S rRNA dimethylase 1;
AltName: Full=Mitochondrial transcription factor B1;
AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase 1; Flags:
Precursor
gi|83032436|gb|ABB97064.1| mitochondrial transcription factor B-like protein [Vermamoeba
vermiformis]
Length = 343
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 69/125 (55%), Gaps = 6/125 (4%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPI-IDLPF 59
+IA G +Q RL++M Q C+V IPG AF+PKP VD +V PRV P+ +++P
Sbjct: 212 LIANPGTKQYSRLTVMTQQLCSVKKLSDIPGSAFVPKPDVDASLVSMVPRVTPLGVNVPT 271
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
+E V +F R+K + L P+ + LL RA + P LRP QL+V ++ +
Sbjct: 272 PTLEYVCRQVFGQRRKMINNSVKTLGPEAE-----ILLARAHIDPTLRPEQLTVPQWCDL 326
Query: 120 CLAYR 124
AY+
Sbjct: 327 ARAYQ 331
>gi|341900967|gb|EGT56902.1| hypothetical protein CAEBREN_01301 [Caenorhabditis brenneri]
Length = 340
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 64/114 (56%), Gaps = 1/114 (0%)
Query: 34 FIPKPQVDVGVVHFTPRVHPIIDLPFKLIERVVSCIFRYRQKQVYKPASLLF-PKRKRQL 92
F+P+PQVDVGVV F PR P++ F+++E++ +F YRQK V K L+ P+ + +L
Sbjct: 191 FVPRPQVDVGVVRFVPRKTPLVKTSFEVLEKLCRQVFHYRQKYVEKGLKTLYPPELENEL 250
Query: 93 VVSLLERACVKPILRPYQLSVQEFGQICLAYRDMCEEMPGLYEYTLEDTPGDIE 146
L ++ V P +L +++F + Y + C PGL+ Y + ++E
Sbjct: 251 ADELFKKCRVDPTTTSIRLGIEQFADLAEGYNEQCIRYPGLFLYDYTNKQHNLE 304
>gi|407782419|ref|ZP_11129632.1| dimethyladenosine transferase [Oceanibaculum indicum P24]
gi|407206149|gb|EKE76111.1| dimethyladenosine transferase [Oceanibaculum indicum P24]
Length = 283
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFKLI 62
A G E RLS++ Q C D F IP +AF P P+V VVH PR P+ L+
Sbjct: 163 AGHGEEAYGRLSVIVQWLCAADLLFDIPPRAFTPPPKVTSSVVHLVPRAQPLAPAEKNLL 222
Query: 63 ERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQICLA 122
ERV + F R+K + + L ++LL A ++P LR QLS+ +F + A
Sbjct: 223 ERVTAAAFGQRRKMLRQSLKSLGTDP-----LALLAAASIEPTLRAEQLSIAQFCALAEA 277
Query: 123 YRD 125
R
Sbjct: 278 LRS 280
>gi|440793060|gb|ELR14257.1| dimethyladenosine transferase 1, mitochondrial, partial
[Acanthamoeba castellanii str. Neff]
Length = 270
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 63/128 (49%), Gaps = 5/128 (3%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFKLI 62
A G + RLS+M Q C F +P F+P P+V +V PRV P+ P K +
Sbjct: 141 ARSGTSEYGRLSVMTQQSCTAQTCFNVPASVFVPPPKVTGTMVRIEPRVTPLAPAPVKEL 200
Query: 63 ERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQICLA 122
E V +F R+K + + L + + L+ RA + P RP L+V+E+ + A
Sbjct: 201 EVVCRQVFGQRRKMLSNAITTLG-----EGSLPLIARAGLDPTKRPDALTVEEWCSLARA 255
Query: 123 YRDMCEEM 130
Y++ +EM
Sbjct: 256 YKEWMDEM 263
>gi|83032434|gb|ABB97063.1| mitochondrial transcription factor B-like protein [Acanthamoeba
castellanii]
Length = 307
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 63/128 (49%), Gaps = 5/128 (3%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFKLI 62
A G + RLS+M Q C F +P F+P P+V +V PRV P+ P K +
Sbjct: 178 ARSGTSEYGRLSVMTQQSCTAQTCFNVPASVFVPPPKVTGTMVRIEPRVTPLAPAPVKEL 237
Query: 63 ERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQICLA 122
E V +F R+K + + L + + L+ RA + P RP L+V+E+ + A
Sbjct: 238 EVVCRQVFGQRRKMLSNAITTLG-----EGSLPLIARAGLDPTKRPDALTVEEWCSLARA 292
Query: 123 YRDMCEEM 130
Y++ +EM
Sbjct: 293 YKEWMDEM 300
>gi|260818308|ref|XP_002604325.1| hypothetical protein BRAFLDRAFT_125270 [Branchiostoma floridae]
gi|229289651|gb|EEN60336.1| hypothetical protein BRAFLDRAFT_125270 [Branchiostoma floridae]
Length = 1177
Score = 68.6 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 30/41 (73%), Positives = 31/41 (75%)
Query: 9 QRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP 49
QR RLSIM Q C V H F IPGK F+PKP VDVGVVHFTP
Sbjct: 200 QRSRLSIMSQYLCRVKHCFRIPGKCFVPKPDVDVGVVHFTP 240
>gi|424942983|ref|ZP_18358746.1| rRNA (adenine-N6,N6)-dimethyltransferase [Pseudomonas aeruginosa
NCMG1179]
gi|346059429|dbj|GAA19312.1| rRNA (adenine-N6,N6)-dimethyltransferase [Pseudomonas aeruginosa
NCMG1179]
Length = 268
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 65/135 (48%), Gaps = 16/135 (11%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ AT G RLSIM Q C V+H F + AF P P+VD +V TP HP D
Sbjct: 145 LAATPGGGDWGRLSIMVQYHCRVEHLFNVGSGAFNPPPKVDSAIVRLTPFTEPPHPARDP 204
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
KL+ERVV F R+K + L L V +E A V P LRP QL + F
Sbjct: 205 --KLLERVVREAFNQRRKTLRNTLKPL-------LSVEDIEAAEVDPTLRPEQLDLTAF- 254
Query: 118 QICLAYRDMCEEMPG 132
+ LA R E+PG
Sbjct: 255 -VRLANR--LAELPG 266
>gi|191639502|ref|YP_001988668.1| dimethyladenosine transferase [Lactobacillus casei BL23]
gi|409998367|ref|YP_006752768.1| ribosomal RNA small subunit methyltransferase A [Lactobacillus
casei W56]
gi|190713804|emb|CAQ67810.1| Dimethyladenosine transferase (S-adenosylmethionine-6-N ,
N-adenosyl(rRNA) dimethyltransferase) (16S rRNA
dimethylase) (High level kasugamycin resistance protein
ksgA) (Kasugamycin dimethyltransferase) [Lactobacillus
casei BL23]
gi|406359379|emb|CCK23649.1| Ribosomal RNA small subunit methyltransferase A [Lactobacillus
casei W56]
Length = 302
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 61/124 (49%), Gaps = 3/124 (2%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDL--PFK 60
AT G ++ LSI Q +V FT+ AF+P P VD +V T R P+ L P
Sbjct: 170 ATPGSKEYGSLSIAVQLVASVATAFTVSRHAFVPAPNVDSAIVTLTQRTEPLAALTDPAS 229
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
+R+V F R+K ++ +LF K + + S L A + P R +LS+ +F ++
Sbjct: 230 F-DRLVRGAFASRRKTLWNNLVVLFGKTNKAAIRSALTTAAIDPGTRAERLSIADFARLD 288
Query: 121 LAYR 124
A R
Sbjct: 289 RALR 292
>gi|313111762|ref|ZP_07797555.1| rRNA (adenine-N6,N6)-dimethyltransferase [Pseudomonas aeruginosa
39016]
gi|386068487|ref|YP_005983791.1| dimethyladenosine transferase [Pseudomonas aeruginosa NCGM2.S1]
gi|421165470|ref|ZP_15623798.1| dimethyladenosine transferase [Pseudomonas aeruginosa ATCC 700888]
gi|310884057|gb|EFQ42651.1| rRNA (adenine-N6,N6)-dimethyltransferase [Pseudomonas aeruginosa
39016]
gi|348037046|dbj|BAK92406.1| dimethyladenosine transferase [Pseudomonas aeruginosa NCGM2.S1]
gi|404541683|gb|EKA51034.1| dimethyladenosine transferase [Pseudomonas aeruginosa ATCC 700888]
Length = 268
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 65/135 (48%), Gaps = 16/135 (11%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ AT G RLSIM Q C V+H F + AF P P+VD +V TP HP D
Sbjct: 145 LAATPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLTPFAEPPHPARDP 204
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
KL+ERVV F R+K + L L V +E A V P LRP QL + F
Sbjct: 205 --KLLERVVREAFNQRRKTLRNTLKPL-------LSVEDIEAAEVDPTLRPEQLDLAAF- 254
Query: 118 QICLAYRDMCEEMPG 132
+ LA R E+PG
Sbjct: 255 -VRLANR--LAELPG 266
>gi|227532998|ref|ZP_03963047.1| dimethyladenosine transferase (S-adenosylmethionine-6-N ,
N-adenosyl(rRNA) dimethyltransferase) [Lactobacillus
paracasei subsp. paracasei ATCC 25302]
gi|227189399|gb|EEI69466.1| dimethyladenosine transferase (S-adenosylmethionine-6-N ,
N-adenosyl(rRNA) dimethyltransferase) [Lactobacillus
paracasei subsp. paracasei ATCC 25302]
Length = 302
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 61/124 (49%), Gaps = 3/124 (2%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDL--PFK 60
AT G ++ LSI Q +V FT+ AF+P P VD +V T R P+ L P
Sbjct: 170 ATPGSKEYGSLSIAVQLVASVATAFTVSRHAFVPAPNVDSAIVTLTQRTEPLAALTDPAS 229
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
+R+V F R+K ++ +LF K + + S L A + P R +LS+ +F ++
Sbjct: 230 F-DRLVRGAFASRRKTLWNNLVVLFGKTNKAAIRSALTTAAIDPGTRAERLSIADFARLD 288
Query: 121 LAYR 124
A R
Sbjct: 289 RALR 292
>gi|239630423|ref|ZP_04673454.1| dimethyladenosine transferase dimethyltransferase [Lactobacillus
paracasei subsp. paracasei 8700:2]
gi|301067575|ref|YP_003789598.1| dimethyladenosine transferase (rRNA methylation) [Lactobacillus
casei str. Zhang]
gi|385821272|ref|YP_005857659.1| Dimethyladenosine transferase [Lactobacillus casei LC2W]
gi|385824464|ref|YP_005860806.1| Dimethyladenosine transferase [Lactobacillus casei BD-II]
gi|417981761|ref|ZP_12622425.1| dimethyladenosine transferase [Lactobacillus casei 12A]
gi|417984584|ref|ZP_12625203.1| dimethyladenosine transferase [Lactobacillus casei 21/1]
gi|417997317|ref|ZP_12637576.1| dimethyladenosine transferase [Lactobacillus casei M36]
gi|418011963|ref|ZP_12651709.1| dimethyladenosine transferase [Lactobacillus casei Lc-10]
gi|418013041|ref|ZP_12652703.1| dimethyladenosine transferase [Lactobacillus casei Lpc-37]
gi|239526706|gb|EEQ65707.1| dimethyladenosine transferase dimethyltransferase [Lactobacillus
paracasei subsp. paracasei 8700:2]
gi|300439982|gb|ADK19748.1| Dimethyladenosine transferase (rRNA methylation) [Lactobacillus
casei str. Zhang]
gi|327383599|gb|AEA55075.1| Dimethyladenosine transferase [Lactobacillus casei LC2W]
gi|327386791|gb|AEA58265.1| Dimethyladenosine transferase [Lactobacillus casei BD-II]
gi|410521164|gb|EKP96129.1| dimethyladenosine transferase [Lactobacillus casei 12A]
gi|410524423|gb|EKP99332.1| dimethyladenosine transferase [Lactobacillus casei 21/1]
gi|410533077|gb|EKQ07765.1| dimethyladenosine transferase [Lactobacillus casei M36]
gi|410551212|gb|EKQ25280.1| dimethyladenosine transferase [Lactobacillus casei Lc-10]
gi|410556238|gb|EKQ30151.1| dimethyladenosine transferase [Lactobacillus casei Lpc-37]
Length = 298
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 61/124 (49%), Gaps = 3/124 (2%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDL--PFK 60
AT G ++ LSI Q +V FT+ AF+P P VD +V T R P+ L P
Sbjct: 166 ATPGSKEYGSLSIAVQLVASVATAFTVSRHAFVPAPNVDSAIVTLTQRTEPLAALTDPAS 225
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
+R+V F R+K ++ +LF K + + S L A + P R +LS+ +F ++
Sbjct: 226 F-DRLVRGAFASRRKTLWNNLVVLFGKTNKAAIRSALTTAAIDPGTRAERLSIADFARLD 284
Query: 121 LAYR 124
A R
Sbjct: 285 RALR 288
>gi|107099578|ref|ZP_01363496.1| hypothetical protein PaerPA_01000591 [Pseudomonas aeruginosa PACS2]
gi|254243686|ref|ZP_04937008.1| rRNA (adenine-N6,N6)-dimethyltransferase [Pseudomonas aeruginosa
2192]
gi|386056662|ref|YP_005973184.1| dimethyladenosine transferase [Pseudomonas aeruginosa M18]
gi|451983550|ref|ZP_21931829.1| Dimethyladenosine transferase [Pseudomonas aeruginosa 18A]
gi|126197064|gb|EAZ61127.1| rRNA (adenine-N6,N6)-dimethyltransferase [Pseudomonas aeruginosa
2192]
gi|347302968|gb|AEO73082.1| dimethyladenosine transferase [Pseudomonas aeruginosa M18]
gi|451758789|emb|CCQ84352.1| Dimethyladenosine transferase [Pseudomonas aeruginosa 18A]
Length = 268
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 65/135 (48%), Gaps = 16/135 (11%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ AT G RLSIM Q C V+H F + AF P P+VD +V TP HP D
Sbjct: 145 LAATPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLTPFAEPPHPARDP 204
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
KL+ERVV F R+K + L L V +E A V P LRP QL + F
Sbjct: 205 --KLLERVVREAFNQRRKTLRNTLKPL-------LSVEDIEAAEVDPTLRPEQLDLAAF- 254
Query: 118 QICLAYRDMCEEMPG 132
+ LA R E+PG
Sbjct: 255 -VRLANR--LAELPG 266
>gi|421151678|ref|ZP_15611286.1| dimethyladenosine transferase [Pseudomonas aeruginosa ATCC 14886]
gi|404526878|gb|EKA37065.1| dimethyladenosine transferase [Pseudomonas aeruginosa ATCC 14886]
Length = 268
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 65/135 (48%), Gaps = 16/135 (11%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ AT G RLSIM Q C V+H F + AF P P+VD +V TP HP D
Sbjct: 145 LAATPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLTPFAEPPHPARDP 204
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
KL+ERVV F R+K + L L V +E A V P LRP QL + F
Sbjct: 205 --KLLERVVREAFNQRRKTLRNTLKPL-------LSVEDIEAAEVDPTLRPEQLDLAAF- 254
Query: 118 QICLAYRDMCEEMPG 132
+ LA R E+PG
Sbjct: 255 -VRLANR--LAELPG 266
>gi|116054320|ref|YP_788765.1| dimethyladenosine transferase [Pseudomonas aeruginosa UCBPP-PA14]
gi|218889333|ref|YP_002438197.1| dimethyladenosine transferase [Pseudomonas aeruginosa LESB58]
gi|254237194|ref|ZP_04930517.1| rRNA (adenine-N6,N6)-dimethyltransferase [Pseudomonas aeruginosa
C3719]
gi|296387098|ref|ZP_06876597.1| dimethyladenosine transferase [Pseudomonas aeruginosa PAb1]
gi|355647009|ref|ZP_09054762.1| ribosomal RNA small subunit methyltransferase A [Pseudomonas sp.
2_1_26]
gi|392982005|ref|YP_006480592.1| KsgA/Dim1 family 16S ribosomal RNA methyltransferase [Pseudomonas
aeruginosa DK2]
gi|416855756|ref|ZP_11911677.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas aeruginosa 138244]
gi|416873060|ref|ZP_11917187.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas aeruginosa 152504]
gi|419756074|ref|ZP_14282426.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas aeruginosa PADK2_CF510]
gi|421172357|ref|ZP_15630132.1| dimethyladenosine transferase [Pseudomonas aeruginosa CI27]
gi|421178504|ref|ZP_15636117.1| dimethyladenosine transferase [Pseudomonas aeruginosa E2]
gi|115589541|gb|ABJ15556.1| rRNA (adenine-N6,N6)-dimethyltransferase [Pseudomonas aeruginosa
UCBPP-PA14]
gi|126169125|gb|EAZ54636.1| rRNA (adenine-N6,N6)-dimethyltransferase [Pseudomonas aeruginosa
C3719]
gi|218769556|emb|CAW25316.1| rRNA (adenine-N6,N6)-dimethyltransferase [Pseudomonas aeruginosa
LESB58]
gi|334842654|gb|EGM21257.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas aeruginosa 138244]
gi|334845358|gb|EGM23921.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas aeruginosa 152504]
gi|354828151|gb|EHF12278.1| ribosomal RNA small subunit methyltransferase A [Pseudomonas sp.
2_1_26]
gi|384397736|gb|EIE44147.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas aeruginosa PADK2_CF510]
gi|392317510|gb|AFM62890.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas aeruginosa DK2]
gi|404537953|gb|EKA47516.1| dimethyladenosine transferase [Pseudomonas aeruginosa CI27]
gi|404548353|gb|EKA57308.1| dimethyladenosine transferase [Pseudomonas aeruginosa E2]
gi|453045974|gb|EME93692.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas aeruginosa PA21_ST175]
Length = 268
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 65/135 (48%), Gaps = 16/135 (11%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ AT G RLSIM Q C V+H F + AF P P+VD +V TP HP D
Sbjct: 145 LAATPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLTPFAEPPHPARDP 204
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
KL+ERVV F R+K + L L V +E A V P LRP QL + F
Sbjct: 205 --KLLERVVREAFNQRRKTLRNTLKPL-------LSVEDIEAAEVDPTLRPEQLDLAAF- 254
Query: 118 QICLAYRDMCEEMPG 132
+ LA R E+PG
Sbjct: 255 -VRLANR--LAELPG 266
>gi|418006241|ref|ZP_12646200.1| dimethyladenosine transferase [Lactobacillus casei UW1]
gi|410544165|gb|EKQ18501.1| dimethyladenosine transferase [Lactobacillus casei UW1]
Length = 298
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 61/124 (49%), Gaps = 3/124 (2%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDL--PFK 60
AT G ++ LSI Q +V FT+ AF+P P VD +V T R P+ L P
Sbjct: 166 ATPGSKEYGSLSIAVQLVASVATAFTVSRHAFVPAPNVDSAIVTLTQRTEPLAALTDPAS 225
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
+R+V F R+K ++ +LF K + + S L A + P R +LS+ +F ++
Sbjct: 226 F-DRLVRGAFASRRKTLWNNLVVLFGKTNKAAIRSALTTAAIDPGTRAERLSIADFARLD 284
Query: 121 LAYR 124
A R
Sbjct: 285 RALR 288
>gi|116496022|ref|YP_807756.1| dimethyladenosine transferase [Lactobacillus casei ATCC 334]
gi|418003370|ref|ZP_12643457.1| dimethyladenosine transferase [Lactobacillus casei UCD174]
gi|116106172|gb|ABJ71314.1| dimethyladenosine transferase [Lactobacillus casei ATCC 334]
gi|410542487|gb|EKQ16934.1| dimethyladenosine transferase [Lactobacillus casei UCD174]
Length = 298
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 61/124 (49%), Gaps = 3/124 (2%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDL--PFK 60
AT G ++ LSI Q +V FT+ AF+P P VD +V T R P+ L P
Sbjct: 166 ATPGSKEYGSLSIAVQLVASVATAFTVSRHAFVPAPNVDSAIVTLTQRTEPLAALTDPAS 225
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
+R+V F R+K ++ +LF K + + S L A + P R +LS+ +F ++
Sbjct: 226 F-DRLVRGAFASRRKTLWNNLVVLFGKTNKAAIRSALTTAAIDPGTRAERLSIADFARLD 284
Query: 121 LAYR 124
A R
Sbjct: 285 RALR 288
>gi|420137187|ref|ZP_14645182.1| dimethyladenosine transferase [Pseudomonas aeruginosa CIG1]
gi|421157632|ref|ZP_15616989.1| dimethyladenosine transferase [Pseudomonas aeruginosa ATCC 25324]
gi|403250028|gb|EJY63489.1| dimethyladenosine transferase [Pseudomonas aeruginosa CIG1]
gi|404550439|gb|EKA59188.1| dimethyladenosine transferase [Pseudomonas aeruginosa ATCC 25324]
Length = 268
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 65/135 (48%), Gaps = 16/135 (11%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ AT G RLSIM Q C V+H F + AF P P+VD +V TP HP D
Sbjct: 145 LAATPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLTPFAEPPHPARDP 204
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
KL+ERVV F R+K + L L V +E A V P LRP QL + F
Sbjct: 205 --KLLERVVREAFNQRRKTLRNTLKPL-------LSVEDIEAAEVDPTLRPEQLDLAAF- 254
Query: 118 QICLAYRDMCEEMPG 132
+ LA R E+PG
Sbjct: 255 -VRLANR--LAELPG 266
>gi|15595789|ref|NP_249283.1| dimethyladenosine transferase [Pseudomonas aeruginosa PAO1]
gi|418584836|ref|ZP_13148893.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas aeruginosa MPAO1/P1]
gi|418590789|ref|ZP_13154694.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas aeruginosa MPAO1/P2]
gi|421515212|ref|ZP_15961898.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas aeruginosa PAO579]
gi|27151603|sp|Q9I5U5.1|RSMA_PSEAE RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|9946464|gb|AAG03981.1|AE004495_5 rRNA (adenine-N6,N6)-dimethyltransferase [Pseudomonas aeruginosa
PAO1]
gi|375045168|gb|EHS37754.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas aeruginosa MPAO1/P1]
gi|375050335|gb|EHS42817.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas aeruginosa MPAO1/P2]
gi|404348940|gb|EJZ75277.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas aeruginosa PAO579]
Length = 268
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 64/135 (47%), Gaps = 16/135 (11%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ AT G RLSIM Q C V+H F + AF P P+VD +V TP HP D
Sbjct: 145 LAATPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLTPFAEPPHPARDP 204
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
KL+ERVV F R+K + L L V +E A V P LRP QL + F
Sbjct: 205 --KLLERVVREAFNQRRKTLRNTLKPL-------LSVEDIEAAEVDPTLRPEQLDLAAFV 255
Query: 118 QICLAYRDMCEEMPG 132
++ + E+PG
Sbjct: 256 RLA----NQLAELPG 266
>gi|152987663|ref|YP_001346131.1| dimethyladenosine transferase [Pseudomonas aeruginosa PA7]
gi|150962821|gb|ABR84846.1| dimethyladenosine transferase [Pseudomonas aeruginosa PA7]
Length = 268
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 59/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ AT G RLSIM Q C V+H F + AF P P+VD +V TP HP D
Sbjct: 145 LAATPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLTPFAEPPHPARDP 204
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
KL+ERVV F R+K + L L V +E A V P LRP QL + F
Sbjct: 205 --KLLERVVREAFNQRRKTLRNTLKPL-------LSVEDIEAAAVDPTLRPEQLDLAAFV 255
Query: 118 QIC 120
++
Sbjct: 256 RLA 258
>gi|417987836|ref|ZP_12628389.1| dimethyladenosine transferase [Lactobacillus casei 32G]
gi|410522228|gb|EKP97177.1| dimethyladenosine transferase [Lactobacillus casei 32G]
Length = 298
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 61/124 (49%), Gaps = 3/124 (2%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDL--PFK 60
AT G ++ LSI Q +V FT+ AF+P P VD +V T R P+ L P
Sbjct: 166 ATPGSKEYGSLSIAVQLVASVVTAFTVSRHAFVPAPNVDSAIVTLTQRTKPLAALTDPAS 225
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
+R+V F R+K ++ +LF K + + S L A + P R +LS+ +F ++
Sbjct: 226 F-DRLVRGAFASRRKTLWNNLVVLFGKTNKAAIRSALTTAAIDPGTRAERLSIADFARLD 284
Query: 121 LAYR 124
A R
Sbjct: 285 RALR 288
>gi|417990878|ref|ZP_12631339.1| dimethyladenosine transferase [Lactobacillus casei A2-362]
gi|417994208|ref|ZP_12634542.1| dimethyladenosine transferase [Lactobacillus casei CRF28]
gi|418000225|ref|ZP_12640421.1| dimethyladenosine transferase [Lactobacillus casei T71499]
gi|410530524|gb|EKQ05297.1| dimethyladenosine transferase [Lactobacillus casei CRF28]
gi|410533320|gb|EKQ08001.1| dimethyladenosine transferase [Lactobacillus casei A2-362]
gi|410537145|gb|EKQ11724.1| dimethyladenosine transferase [Lactobacillus casei T71499]
Length = 298
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 61/124 (49%), Gaps = 3/124 (2%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDL--PFK 60
AT G ++ LSI Q +V FT+ AF+P P VD +V T R P+ L P
Sbjct: 166 ATPGSKEYGSLSIAVQLVASVATAFTVSRHAFVPAPNVDSAIVTLTQRTKPLAALTDPAS 225
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
+R+V F R+K ++ +LF K + + S L A + P R +LS+ +F ++
Sbjct: 226 F-DRLVRGAFASRRKTLWNNLVVLFGKTNKAAIRSALTIAAIDPGTRAERLSIADFARLD 284
Query: 121 LAYR 124
A R
Sbjct: 285 RALR 288
>gi|256084910|ref|XP_002578668.1| dimethyladenosine transferase [Schistosoma mansoni]
gi|360042877|emb|CCD78287.1| putative dimethyladenosine transferase [Schistosoma mansoni]
Length = 295
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 8 EQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFKLIERVVS 67
EQR RLS+M Q +C+V + IPG AF+P P+VDVGVV P P+I +P+ +E++
Sbjct: 230 EQRSRLSVMSQAYCDVKYMKDIPGTAFVPPPKVDVGVVRLIPLKQPLIPVPYPYVEKLTK 289
Query: 68 C 68
Sbjct: 290 A 290
>gi|49082884|gb|AAT50842.1| PA0592, partial [synthetic construct]
Length = 269
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 63/135 (46%), Gaps = 16/135 (11%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ AT G RLSIM Q C V+H F + AF P P+VD +V TP HP D
Sbjct: 145 LAATPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLTPFAEPPHPARDP 204
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
KL+ERVV F R+K + L L V +E A V P L P QL + F
Sbjct: 205 --KLLERVVREAFNQRRKTLRNTLKPL-------LSVEDIEAAEVDPTLHPEQLDLAAFV 255
Query: 118 QICLAYRDMCEEMPG 132
++ + E+PG
Sbjct: 256 RLA----NQLAELPG 266
>gi|418009077|ref|ZP_12648918.1| dimethyladenosine transferase [Lactobacillus casei UW4]
gi|410544759|gb|EKQ19076.1| dimethyladenosine transferase [Lactobacillus casei UW4]
Length = 298
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 60/124 (48%), Gaps = 3/124 (2%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDL--PFK 60
AT G ++ LSI Q +V F + AF+P P VD +V T R P+ L P
Sbjct: 166 ATPGSKEYGSLSIAVQLVASVATAFMVSRHAFVPAPNVDSAIVTLTQRTEPLAALTDPAS 225
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
+R+V F R+K ++ +LF K + + S L A + P R +LS+ +F ++
Sbjct: 226 F-DRLVRGAFASRRKTLWNNLVVLFGKTNKAAIRSALTTAAIDPGTRAERLSIADFARLD 284
Query: 121 LAYR 124
A R
Sbjct: 285 RALR 288
>gi|359786783|ref|ZP_09289871.1| dimethyladenosine transferase [Halomonas sp. GFAJ-1]
gi|359295890|gb|EHK60147.1| dimethyladenosine transferase [Halomonas sp. GFAJ-1]
Length = 275
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 66/134 (49%), Gaps = 12/134 (8%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP--RVHPIIDLP 58
+ A G RLS+M Q +C+VD F +P +AF+P+P+VD +V TP R+ D P
Sbjct: 146 LAAEPGSTDWGRLSVMAQYYCHVDQLFIVPPEAFVPRPKVDSAIVRLTPHDRLPHTADDP 205
Query: 59 FKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQ 118
L E +V F R+K + K ++ + LE + P RP LSV E+
Sbjct: 206 ALLFE-LVKLAFGQRRKTLRN-------NLKGRVSAATLEVLGIDPARRPQTLSVAEY-- 255
Query: 119 ICLAYRDMCEEMPG 132
+ +A + +E G
Sbjct: 256 VAIANQVAADEASG 269
>gi|209964862|ref|YP_002297777.1| dimethyladenosine transferase [Rhodospirillum centenum SW]
gi|209958328|gb|ACI98964.1| dimethyladenosine transferase [Rhodospirillum centenum SW]
Length = 276
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 61/124 (49%), Gaps = 5/124 (4%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A E RL++MCQ + F +P +AF P P+VD + H TPR P D F+
Sbjct: 157 IVARPRTEAYGRLAVMCQWLADCRILFDVPARAFTPPPRVDSAIAHLTPRARPADDPDFR 216
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
+E +V+ F R+K + ASL R+ + LLE + P R ++ V F +
Sbjct: 217 TMEALVAAAFGQRRKMLR--ASLKSVVREPE---PLLESVGIAPTSRAEEVDVAGFVTLA 271
Query: 121 LAYR 124
A R
Sbjct: 272 KALR 275
>gi|320166640|gb|EFW43539.1| dimethyladenosine transferase 1 [Capsaspora owczarzaki ATCC 30864]
Length = 412
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 57/123 (46%), Gaps = 1/123 (0%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A G R RLS++ Q+ + + +P F+P P+V VG V+F P P+ P
Sbjct: 177 IVAKPGTSDRSRLSLLVQHAFAARYHYHMPNTVFVPPPKVQVGGVYFAPLEQPMTAAPIA 236
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
+E V I R K + L + + LLE+A + P R +S ++F +
Sbjct: 237 SVELVAQHILNQRGKFISNGVGRLV-GGNADIALQLLEQAKIPPTTRVSNVSTEQFAALV 295
Query: 121 LAY 123
AY
Sbjct: 296 DAY 298
>gi|398997172|ref|ZP_10700002.1| dimethyladenosine transferase [Pseudomonas sp. GM21]
gi|398124665|gb|EJM14171.1| dimethyladenosine transferase [Pseudomonas sp. GM21]
Length = 272
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 56/123 (45%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
M A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 145 MAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPHTVLPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
KL+ERVV F R+K + LL + +E A V LRP QL + F
Sbjct: 204 -HKLLERVVREAFNQRRKTLRNTLKLLLSNAE-------IEAAGVDGSLRPEQLDLAAFV 255
Query: 118 QIC 120
++
Sbjct: 256 RLA 258
>gi|54298928|ref|YP_125297.1| dimethyladenosine transferase [Legionella pneumophila str. Paris]
gi|148361259|ref|YP_001252466.1| dimethyladenosine transferase [Legionella pneumophila str. Corby]
gi|296108598|ref|YP_003620299.1| dimethyladenosine transferase [Legionella pneumophila 2300/99
Alcoy]
gi|397668608|ref|YP_006510145.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Legionella pneumophila subsp. pneumophila]
gi|62900488|sp|Q5X0V1.1|RSMA_LEGPA RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|166221673|sp|A5IIC0.1|RSMA_LEGPC RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|53752713|emb|CAH14148.1| hypothetical protein lpp2995 [Legionella pneumophila str. Paris]
gi|148283032|gb|ABQ57120.1| dimethyladenosine transferase [Legionella pneumophila str. Corby]
gi|295650500|gb|ADG26347.1| dimethyladenosine transferase [Legionella pneumophila 2300/99
Alcoy]
gi|395132019|emb|CCD10312.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Legionella pneumophila subsp. pneumophila]
Length = 256
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 61/119 (51%), Gaps = 8/119 (6%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPFKL 61
AT G + RLS+M Q C V++ F +P +AF PKP+VD +V TP RV P + +
Sbjct: 140 ATHGTKAYGRLSVMLQYHCEVEYLFDVPPEAFEPKPKVDSAIVRLTPYRVSPFESVNTEK 199
Query: 62 IERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
+E +V+ F R+K L K + +S L + RP Q+SV E+ Q+
Sbjct: 200 LENIVAKAFAMRRKT-------LTNNLKGIISLSQLNDLGIDGGKRPEQISVAEYVQLA 251
>gi|81429267|ref|YP_396268.1| dimethyladenosine transferase [Lactobacillus sakei subsp. sakei
23K]
gi|119365029|sp|Q38V22.1|RSMA_LACSS RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|78610910|emb|CAI55962.1| Dimethyladenosine transferase (S-adenosylmethionine-6-N,
N-adenosyl(rRNA) dimethyltransferase) [Lactobacillus
sakei subsp. sakei 23K]
Length = 297
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 63/121 (52%), Gaps = 3/121 (2%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF-KL 61
A G + LSI Q V F +P AF+P+P VD +V F R P++ + +L
Sbjct: 163 AAPGSKAYGSLSIAVQLHSEVKLAFIVPKTAFVPQPNVDSAIVEFVGRQEPLVTVQNQQL 222
Query: 62 IERVVSCIFRYRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEFGQI 119
+++V F R+K ++ F K++ + +V+ L++A + P R QLS+Q+F Q+
Sbjct: 223 FDQLVRGAFAQRRKTLWNNLQNQFGKQEEVKAGLVAALDQADIAPSTRAEQLSIQQFAQL 282
Query: 120 C 120
Sbjct: 283 S 283
>gi|359407928|ref|ZP_09200402.1| dimethyladenosine transferase [SAR116 cluster alpha proteobacterium
HIMB100]
gi|356677291|gb|EHI49638.1| dimethyladenosine transferase [SAR116 cluster alpha proteobacterium
HIMB100]
Length = 285
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 59/116 (50%), Gaps = 7/116 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A G + RLS++ Q C + +F +P +AF+P P+V VVH PR P+ D
Sbjct: 163 LVAQPGDKAYGRLSVITQWLCEAELKFDVPPQAFVPPPKVISSVVHLLPRKAPLFDCRKH 222
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+E V + F R+K +L K+ LL A + P +RP QLS++ F
Sbjct: 223 DLETVTAIAFGQRRK-------MLRASFKKYGGEELLNEADIDPAIRPEQLSIEAF 271
>gi|429211577|ref|ZP_19202742.1| dimethyladenosine transferase [Pseudomonas sp. M1]
gi|428156059|gb|EKX02607.1| dimethyladenosine transferase [Pseudomonas sp. M1]
Length = 269
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 63/132 (47%), Gaps = 12/132 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G RLSIM Q +C VD+ FT+ AF P P+V+ +V P HP D
Sbjct: 146 LAAEPGGGDWGRLSIMVQYFCKVDYLFTVGPGAFNPPPKVESAIVRLAPYAEPPHPAKD- 204
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+L+ER+V F R+K + L + + +E A V P LRP QL V +F
Sbjct: 205 -HRLLERIVREAFNQRRKTLRNTLRGL-------MSIEDIEAAGVDPSLRPEQLDVADFV 256
Query: 118 QICLAYRDMCEE 129
++ ++ E
Sbjct: 257 RLANRLAELAPE 268
>gi|347727154|gb|AEP19935.1| dimethyladenosine transferase [Bacillus aquimaris]
Length = 293
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 58/121 (47%), Gaps = 3/121 (2%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIID-LPFKL 61
A G ++ LSI Q + + T+P F+P+P VD V+ T R P +D +
Sbjct: 164 AKPGKKEYGSLSIAIQYYTEAEMVMTVPKTVFMPQPNVDSAVIRLTKREKPPVDVINEDF 223
Query: 62 IERVVSCIFRYRQKQVYKPASLLFP--KRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
V F R+K + + P K K++L++ L +A + P R LS+QEFG++
Sbjct: 224 FFTVTRSSFAQRRKTILNNLTSQLPQGKEKKELIIEALSKAEIDPTRRGETLSIQEFGKL 283
Query: 120 C 120
Sbjct: 284 S 284
>gi|366087169|ref|ZP_09453654.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Lactobacillus zeae KCTC 3804]
Length = 298
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 1/123 (0%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF-KL 61
AT G + LSI Q +V FT+ AF+P P VD +V T R P+ +
Sbjct: 166 ATPGSKDYGSLSIAVQLVADVTTAFTVSRHAFVPAPNVDSAIVTLTQRSEPLAAVTNPDS 225
Query: 62 IERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQICL 121
ER+V F R+K ++ LF K + + + L A + P R QL++ +F ++
Sbjct: 226 FERLVRGAFASRRKTLWNNLVALFGKENKPAIRTALAAANIAPETRAEQLAIADFARLDT 285
Query: 122 AYR 124
A +
Sbjct: 286 ALQ 288
>gi|398937173|ref|ZP_10667212.1| dimethyladenosine transferase [Pseudomonas sp. GM41(2012)]
gi|398167156|gb|EJM55236.1| dimethyladenosine transferase [Pseudomonas sp. GM41(2012)]
Length = 272
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 56/123 (45%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 145 LAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPHAVLPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
KL+ERVV F R+K + LL + +E A V LRP QL + F
Sbjct: 204 -HKLLERVVREAFNQRRKTLRNTLKLLLSNAE-------IEAAGVDGSLRPEQLDLAAFV 255
Query: 118 QIC 120
++
Sbjct: 256 RLA 258
>gi|395651028|ref|ZP_10438878.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas extremaustralis 14-3 substr. 14-3b]
Length = 270
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 55/119 (46%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 145 LAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPHAVLPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
KL+ERVV F R+K + LL + + +E A V LRP QL + F
Sbjct: 204 -HKLLERVVREAFNQRRKTLRNTLKLLLSQAE-------IEAAGVDGSLRPEQLDLAAF 254
>gi|261855877|ref|YP_003263160.1| dimethyladenosine transferase [Halothiobacillus neapolitanus c2]
gi|261836346|gb|ACX96113.1| dimethyladenosine transferase [Halothiobacillus neapolitanus c2]
Length = 285
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 8/133 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G RLS+M Q V+ F +P AF P P+VD +V PR HP++ K
Sbjct: 157 LAAHPGNRDYGRLSLMVQAVAEVESLFVVPPTAFNPPPKVDSAIVRLVPRTHPLVPDDLK 216
Query: 61 -LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
L +VS F +R+K + K +L S + A + P R Q+S+ EF +
Sbjct: 217 ALFGELVSLAFAHRRKTLQN-------NLKHRLPTSTIVLAGIDPGTRAEQVSLDEFITL 269
Query: 120 CLAYRDMCEEMPG 132
++ + P
Sbjct: 270 ARLVKEQASDSPN 282
>gi|398856717|ref|ZP_10612435.1| dimethyladenosine transferase [Pseudomonas sp. GM79]
gi|398242689|gb|EJN28296.1| dimethyladenosine transferase [Pseudomonas sp. GM79]
Length = 272
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 56/123 (45%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 145 LAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPHAVLPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
KL+ERVV F R+K + LL + +E A V LRP QL + F
Sbjct: 204 -HKLLERVVREAFNQRRKTLRNTLKLLLSNAE-------IEAAGVDGSLRPEQLDLAAFV 255
Query: 118 QIC 120
++
Sbjct: 256 RLA 258
>gi|398841896|ref|ZP_10599102.1| dimethyladenosine transferase [Pseudomonas sp. GM102]
gi|398107260|gb|EJL97266.1| dimethyladenosine transferase [Pseudomonas sp. GM102]
Length = 272
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 56/123 (45%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 145 LAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPHAVLPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
KL+ERVV F R+K + LL + +E A V LRP QL + F
Sbjct: 204 -HKLLERVVREAFNQRRKTLRNTLKLLLSNAE-------IEAAGVDGSLRPEQLDLAAFV 255
Query: 118 QIC 120
++
Sbjct: 256 RLA 258
>gi|398924284|ref|ZP_10661101.1| dimethyladenosine transferase [Pseudomonas sp. GM48]
gi|398173615|gb|EJM61445.1| dimethyladenosine transferase [Pseudomonas sp. GM48]
Length = 272
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 59/135 (43%), Gaps = 12/135 (8%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 145 LAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPHAVLPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+L+ERVV F R+K + LL + +E A V LRP QL + F
Sbjct: 204 -HRLLERVVREAFNQRRKTLRNTLKLLLSNAE-------IEAAGVDGSLRPEQLDLAAFV 255
Query: 118 QICLAYRDMCEEMPG 132
++ + + P
Sbjct: 256 RLADKLSEQAAQKPA 270
>gi|389819094|ref|ZP_10209135.1| dimethyladenosine transferase [Planococcus antarcticus DSM 14505]
gi|388463509|gb|EIM05861.1| dimethyladenosine transferase [Planococcus antarcticus DSM 14505]
Length = 292
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 59/125 (47%), Gaps = 7/125 (5%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHP---IIDL 57
+ A G + LSI Q + + T+P F+P+P VD V+H T R P +ID
Sbjct: 162 ITAKPGTKAYGSLSIAIQYYTQAEMALTVPKSVFLPQPNVDSAVIHMTKREVPEVKVIDE 221
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFP--KRKRQLVVSLLERACVKPILRPYQLSVQE 115
F V F R+K + + P K K++L++ LE A V P R L+++E
Sbjct: 222 DFFFT--VTRGSFVQRRKTILNNLQVAMPLGKEKKELILKALEEAEVDPTRRGETLTIKE 279
Query: 116 FGQIC 120
FG +
Sbjct: 280 FGLLA 284
>gi|398901159|ref|ZP_10650110.1| dimethyladenosine transferase [Pseudomonas sp. GM50]
gi|398180278|gb|EJM67864.1| dimethyladenosine transferase [Pseudomonas sp. GM50]
Length = 272
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 56/123 (45%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 145 LAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPHAVLPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
KL+ERVV F R+K + LL + +E A V LRP QL + F
Sbjct: 204 -HKLLERVVREAFNQRRKTLRNTLKLLLNNAE-------IEAAGVDGSLRPEQLDLAAFV 255
Query: 118 QIC 120
++
Sbjct: 256 RLA 258
>gi|172056080|ref|YP_001812540.1| dimethyladenosine transferase [Exiguobacterium sibiricum 255-15]
gi|171988601|gb|ACB59523.1| dimethyladenosine transferase [Exiguobacterium sibiricum 255-15]
Length = 292
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 56/121 (46%), Gaps = 1/121 (0%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPII-DLPFKL 61
A G + LSI Q + + FT+P + FIP P VD V+ R P + L KL
Sbjct: 165 AQPGTKAYGSLSIAIQYYAEAEVCFTVPKQVFIPAPNVDSAVIRLNIRKEPAVKTLDEKL 224
Query: 62 IERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQICL 121
V F R+K + S F K +++ V + L A + P R LS+QEF Q+
Sbjct: 225 FFEVTRASFAQRRKTILNNLSSHFGKAEKEAVEAALHEAGIDPRRRGETLSLQEFAQLAD 284
Query: 122 A 122
A
Sbjct: 285 A 285
>gi|399522520|ref|ZP_10763183.1| dimethyladenosine transferase [Pseudomonas pseudoalcaligenes CECT
5344]
gi|399109384|emb|CCH39744.1| dimethyladenosine transferase [Pseudomonas pseudoalcaligenes CECT
5344]
Length = 269
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 55/123 (44%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
M A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 144 MAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPHETLPHPAKD- 202
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+L+ERVV F R+K + L P +E A V LRP QL + F
Sbjct: 203 -HRLLERVVREAFNQRRKTLRNTLKQLLP-------ADAIEAAGVDGSLRPEQLDLAAFV 254
Query: 118 QIC 120
++
Sbjct: 255 RLA 257
>gi|426411834|ref|YP_007031933.1| dimethyladenosine transferase [Pseudomonas sp. UW4]
gi|426270051|gb|AFY22128.1| dimethyladenosine transferase [Pseudomonas sp. UW4]
Length = 272
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 59/135 (43%), Gaps = 12/135 (8%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 145 LAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPHAELPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+L+ERVV F R+K + LL + +E A V LRP QL + F
Sbjct: 204 -HRLLERVVREAFNQRRKTLRNTLKLLLSNAE-------IEAAGVDGSLRPEQLDLAAFV 255
Query: 118 QICLAYRDMCEEMPG 132
++ + + P
Sbjct: 256 RLADKLSEQAPQKPA 270
>gi|398908996|ref|ZP_10654330.1| dimethyladenosine transferase [Pseudomonas sp. GM49]
gi|398188935|gb|EJM76223.1| dimethyladenosine transferase [Pseudomonas sp. GM49]
Length = 272
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 59/135 (43%), Gaps = 12/135 (8%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 145 LAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPHAVLPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+L+ERVV F R+K + LL + +E A V LRP QL + F
Sbjct: 204 -HRLLERVVREAFNQRRKTLRNTLKLLLSNAE-------IEAAGVDGSLRPEQLDLAAFV 255
Query: 118 QICLAYRDMCEEMPG 132
++ + + P
Sbjct: 256 RLADKLSEQAPQKPA 270
>gi|397665542|ref|YP_006507080.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Legionella pneumophila subsp. pneumophila]
gi|395128953|emb|CCD07174.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Legionella pneumophila subsp. pneumophila]
Length = 256
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 8/119 (6%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPFKL 61
A G + RLS+M Q C V++ F +P +AF PKP+VD +V TP RV P + +
Sbjct: 140 AAHGTKAYGRLSVMLQYHCEVEYLFDVPPEAFEPKPKVDSAIVRLTPYRVSPFESVNTEK 199
Query: 62 IERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
+E +V+ F R+K L K + +S L + RP Q+SV E+ Q+
Sbjct: 200 LENIVAKAFAMRRKT-------LTNNLKGIISLSQLNDLGIDGGKRPEQISVAEYVQLA 251
>gi|421505663|ref|ZP_15952598.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas mendocina DLHK]
gi|400343360|gb|EJO91735.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas mendocina DLHK]
Length = 269
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 53/119 (44%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
M A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 144 MAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPHEVLPHPAKD- 202
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+L+ERVV F R+K + L P +E A V LRP QL + F
Sbjct: 203 -HRLLERVVREAFNQRRKTLRNTLKQLLP-------AEAIEAAGVDGSLRPEQLDLAAF 253
>gi|146309027|ref|YP_001189492.1| dimethyladenosine transferase [Pseudomonas mendocina ymp]
gi|145577228|gb|ABP86760.1| dimethyladenosine transferase [Pseudomonas mendocina ymp]
Length = 269
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 53/119 (44%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
M A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 144 MAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPHEVLPHPAKD- 202
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+L+ERVV F R+K + L P +E A V LRP QL + F
Sbjct: 203 -HRLLERVVREAFNQRRKTLRNTLKQLLP-------AEAIEAAGVDGSLRPEQLDLAAF 253
>gi|333902123|ref|YP_004475996.1| ribosomal RNA small subunit methyltransferase A [Pseudomonas fulva
12-X]
gi|333117388|gb|AEF23902.1| Ribosomal RNA small subunit methyltransferase A [Pseudomonas fulva
12-X]
Length = 270
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 56/123 (45%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 145 LAAGPGGGDWGRLSIMVQYHCQVEHLFNVGPGAFNPPPKVDSAIVRLVPHQVLPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+L+ERVV F R+K + L P S +E A V LRP QL + F
Sbjct: 204 -HRLLERVVREAFNQRRKTLRNTLKALLP-------ASEIEAAGVDGSLRPEQLDLAAFV 255
Query: 118 QIC 120
++
Sbjct: 256 RLA 258
>gi|423093364|ref|ZP_17081160.1| dimethyladenosine transferase [Pseudomonas fluorescens Q2-87]
gi|397882263|gb|EJK98750.1| dimethyladenosine transferase [Pseudomonas fluorescens Q2-87]
Length = 272
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 56/123 (45%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 145 LAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPHAVLPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+L+ERVV F R+K + LL + +E A V LRP QL + F
Sbjct: 204 -HRLLERVVREAFNQRRKTLRNTLKLLLSNAE-------IEAAGVDGSLRPEQLDLAAFV 255
Query: 118 QIC 120
++
Sbjct: 256 RLA 258
>gi|398959140|ref|ZP_10677956.1| dimethyladenosine transferase [Pseudomonas sp. GM33]
gi|398145515|gb|EJM34296.1| dimethyladenosine transferase [Pseudomonas sp. GM33]
Length = 272
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 59/135 (43%), Gaps = 12/135 (8%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 145 LAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPHAVLPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+L+ERVV F R+K + LL + +E A V LRP QL + F
Sbjct: 204 -HRLLERVVREAFNQRRKTLRNTLKLLLSNAE-------IEAAGVDGSLRPEQLDLAAFV 255
Query: 118 QICLAYRDMCEEMPG 132
++ + + P
Sbjct: 256 RLADKLSEQAPQKPA 270
>gi|330505265|ref|YP_004382134.1| dimethyladenosine transferase [Pseudomonas mendocina NK-01]
gi|328919551|gb|AEB60382.1| dimethyladenosine transferase [Pseudomonas mendocina NK-01]
Length = 269
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 55/123 (44%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
M A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 144 MAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPHETLPHPAKD- 202
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+L+ERVV F R+K + L P +E A V LRP QL + F
Sbjct: 203 -HRLLERVVREAFNQRRKTLRNTLKQLLP-------AEAIEAAGVDGSLRPEQLDLAAFV 254
Query: 118 QIC 120
++
Sbjct: 255 RLA 257
>gi|407475932|ref|YP_006789809.1| ribosomal RNA small subunit methyltransferase A [Exiguobacterium
antarcticum B7]
gi|407060011|gb|AFS69201.1| Ribosomal RNA small subunit methyltransferase A [Exiguobacterium
antarcticum B7]
Length = 292
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 55/121 (45%), Gaps = 1/121 (0%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPII-DLPFKL 61
A G + LSI Q + + FT+P FIP P VD V+ R P + L KL
Sbjct: 165 AKPGTKAYGSLSIAIQYYAEAEVCFTVPKHVFIPAPNVDSAVIRLNIRKEPAVKTLDEKL 224
Query: 62 IERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQICL 121
V F R+K + S F K +++ V + L A + P R LS+QEF Q+
Sbjct: 225 FFEVTRASFAQRRKTILNNLSSHFGKAEKEAVEAALHEAGIDPRRRGETLSLQEFAQLAD 284
Query: 122 A 122
A
Sbjct: 285 A 285
>gi|407368273|ref|ZP_11114805.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas mandelii JR-1]
Length = 272
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 53/119 (44%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
M A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 145 MAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPHAVLPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
KL+ERVV F R+K + LL + + A V LRP QL + F
Sbjct: 204 -HKLLERVVREAFNQRRKTLRNTLKLLLSNDE-------ITAAGVDGSLRPEQLDLAAF 254
>gi|290974683|ref|XP_002670074.1| predicted protein [Naegleria gruberi]
gi|284083629|gb|EFC37330.1| predicted protein [Naegleria gruberi]
Length = 318
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 71/146 (48%), Gaps = 11/146 (7%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIID---L 57
M A ++ RLS+ Q+ C+V+H F + K+F+P P+VD V+ P+ P+ID +
Sbjct: 168 MSAKNSTKEFGRLSVSSQSVCDVEHMFVVNAKSFVPAPKVDASVMRLIPKTTPLIDNSLV 227
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLF-PKRKRQLVVSLLERA-----CVKPIL--RPY 109
F+ +E+ IF ++KQ+ S F PK+ + +E V +L R
Sbjct: 228 QFEDLEQFCRIIFNGKRKQLNTNLSSYFSPKQCAYIAAGAVEGGSKNMDSVNAVLSQRSQ 287
Query: 110 QLSVQEFGQICLAYRDMCEEMPGLYE 135
L+V+E + + + E P + +
Sbjct: 288 DLTVEEITSMARRFVRLRESDPAIKD 313
>gi|423699688|ref|ZP_17674178.1| dimethyladenosine transferase [Pseudomonas fluorescens Q8r1-96]
gi|387996837|gb|EIK58167.1| dimethyladenosine transferase [Pseudomonas fluorescens Q8r1-96]
Length = 272
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 57/123 (46%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 145 LAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPHAVLPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+L+ERVV F R+K + LL L + +E A V LRP QL + F
Sbjct: 204 -HRLLERVVREAFNQRRKTLRNTLKLL-------LSSAEIEAAGVDGSLRPEQLDLAAFV 255
Query: 118 QIC 120
++
Sbjct: 256 RLA 258
>gi|378953236|ref|YP_005210724.1| protein KsgA [Pseudomonas fluorescens F113]
gi|359763250|gb|AEV65329.1| KsgA [Pseudomonas fluorescens F113]
Length = 272
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 57/123 (46%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 145 LAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPHAVLPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+L+ERVV F R+K + LL L + +E A V LRP QL + F
Sbjct: 204 -HRLLERVVREAFNQRRKTLRNTLKLL-------LSSAEIEAAGVDGSLRPEQLDLAAFV 255
Query: 118 QIC 120
++
Sbjct: 256 RLA 258
>gi|398890189|ref|ZP_10643876.1| dimethyladenosine transferase [Pseudomonas sp. GM55]
gi|398188492|gb|EJM75794.1| dimethyladenosine transferase [Pseudomonas sp. GM55]
Length = 272
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 56/123 (45%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 145 LAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPHAVLPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+L+ERVV F R+K + LL + +E A V LRP QL + F
Sbjct: 204 -HRLLERVVREAFNQRRKTLRNTLKLLLSNAE-------IEAAGVDGSLRPEQLDLAAFV 255
Query: 118 QIC 120
++
Sbjct: 256 RLA 258
>gi|399000542|ref|ZP_10703268.1| dimethyladenosine transferase [Pseudomonas sp. GM18]
gi|398129769|gb|EJM19125.1| dimethyladenosine transferase [Pseudomonas sp. GM18]
Length = 272
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 56/123 (45%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 145 LAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPHAVLPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+L+ERVV F R+K + LL + +E A V LRP QL + F
Sbjct: 204 -HRLLERVVREAFNQRRKTLRNTLKLLLSNAE-------IEAAGVDGSLRPEQLDLAAFV 255
Query: 118 QIC 120
++
Sbjct: 256 RLA 258
>gi|398866845|ref|ZP_10622319.1| dimethyladenosine transferase [Pseudomonas sp. GM78]
gi|398238858|gb|EJN24579.1| dimethyladenosine transferase [Pseudomonas sp. GM78]
Length = 272
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 145 LAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPHAVLPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+L+ERVV F R+K + LL + +E A V LRP QL + F
Sbjct: 204 -HRLLERVVREAFNQRRKTLRNTLKLLLSNAE-------IEAAGVDGSLRPEQLDLAAF 254
>gi|284048769|ref|YP_003399108.1| dimethyladenosine transferase [Acidaminococcus fermentans DSM
20731]
gi|283952990|gb|ADB47793.1| dimethyladenosine transferase [Acidaminococcus fermentans DSM
20731]
Length = 284
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 61/128 (47%), Gaps = 2/128 (1%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
MIA+ G + LS+ Q + +P + F+P P+VD VV R HP +D+P K
Sbjct: 158 MIASPGGKDYGPLSLALQYYSRPRLAIPVPARDFMPAPRVDSMVVVCEKREHPAVDVPAK 217
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
+ RVV F R+K + L + V LL A + R L+++EFG +
Sbjct: 218 VFFRVVKAAFSQRRKMLSNCLKNLGLSGDQ--VQQLLAEAGIDGKRRGESLTMEEFGNLA 275
Query: 121 LAYRDMCE 128
AYR+ E
Sbjct: 276 RAYRNQAE 283
>gi|339006655|ref|ZP_08639230.1| ribosomal RNA methyltransferase [Brevibacillus laterosporus LMG
15441]
gi|338775864|gb|EGP35392.1| ribosomal RNA methyltransferase [Brevibacillus laterosporus LMG
15441]
Length = 295
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 2/120 (1%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF-KL 61
A G + LS+ Q + +P FIP+P VD V+ + R PI+++ KL
Sbjct: 167 AKPGTKDYGSLSVAAQFYAETSIEMIVPASVFIPRPNVDSAVIKLSIRKQPIVEVADEKL 226
Query: 62 IERVVSCIFRYRQKQVYKP-ASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
RVV F R+K + + F K K++ + LE A + P R LS+QEF +
Sbjct: 227 FFRVVKASFAQRRKTLLNNLVTNYFGKEKKEQALQALEEADILPSRRGETLSIQEFATLA 286
>gi|398873142|ref|ZP_10628407.1| dimethyladenosine transferase [Pseudomonas sp. GM74]
gi|398200427|gb|EJM87339.1| dimethyladenosine transferase [Pseudomonas sp. GM74]
Length = 269
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 56/123 (45%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 145 LAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPHAVLPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+L+ERVV F R+K + LL + +E A V LRP QL + F
Sbjct: 204 -HRLLERVVREAFNQRRKTLRNTLKLLLSNAE-------IEAAGVDGSLRPEQLDLAAFV 255
Query: 118 QIC 120
++
Sbjct: 256 RLA 258
>gi|421874161|ref|ZP_16305768.1| dimethyladenosine transferase [Brevibacillus laterosporus GI-9]
gi|372456816|emb|CCF15317.1| dimethyladenosine transferase [Brevibacillus laterosporus GI-9]
Length = 292
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 2/120 (1%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF-KL 61
A G + LS+ Q + +P FIP+P VD V+ + R PI+++ KL
Sbjct: 167 AKPGTKDYGSLSVAAQFYAETSIEMIVPASVFIPRPNVDSAVIKLSIRKQPIVEVADEKL 226
Query: 62 IERVVSCIFRYRQKQVYKP-ASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
RVV F R+K + + F K K++ + LE A + P R LS+QEF +
Sbjct: 227 FFRVVKASFAQRRKTLLNNLVTNYFGKEKKEQALQALEEADILPSRRGETLSIQEFATLA 286
>gi|339319885|ref|YP_004679580.1| dimethyladenosine transferase [Candidatus Midichloria mitochondrii
IricVA]
gi|338226010|gb|AEI88894.1| dimethyladenosine transferase [Candidatus Midichloria mitochondrii
IricVA]
Length = 271
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 62/125 (49%), Gaps = 5/125 (4%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A + LS++CQ C + F IPG+AF P P+V VV+ P P+ D +
Sbjct: 151 IVANKSTSAYGGLSVICQWLCCTEKLFDIPGEAFWPAPKVTSSVVNLIPHSKPLYDCTLE 210
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
+E + F ++K + L F R+ V +LE + P R +LS+ +F ++
Sbjct: 211 KLEPFLKMAFAQKRKMLRNNLKLAF----REEVSKILEEYGILPTARAEELSIDQFCKLA 266
Query: 121 -LAYR 124
L+Y+
Sbjct: 267 NLSYK 271
>gi|407801359|ref|ZP_11148203.1| ribosomal RNA adenine dimethylase [Alcanivorax sp. W11-5]
gi|407024796|gb|EKE36539.1| ribosomal RNA adenine dimethylase [Alcanivorax sp. W11-5]
Length = 266
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 57/120 (47%), Gaps = 14/120 (11%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A G RLSIM Q C D F +P ++F P P+VD +V P HP+ D
Sbjct: 143 LVAVPGTSDWGRLSIMIQYHCQTDFLFMVPPESFSPAPKVDSAIVRLVPHQTLPHPVTDY 202
Query: 58 PFKLIERVVSCIFRYRQKQVYKP-ASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
P +V+ +F R+K + S L P +E A + P LRP QLS+ +F
Sbjct: 203 P--RFAALVNQVFTQRRKAIRNGLKSFLAPAE--------IEAAGIDPGLRPEQLSLADF 252
>gi|386286965|ref|ZP_10064145.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein [gamma
proteobacterium BDW918]
gi|385280004|gb|EIF43936.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein [gamma
proteobacterium BDW918]
Length = 270
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 61/134 (45%), Gaps = 16/134 (11%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF- 59
+ A G + RLSIM Q +C ++ F +P +AF P+P+V +V TP P PF
Sbjct: 144 LAAGPGSKTYGRLSIMAQYYCAIESLFDVPPEAFSPQPKVQSAIVRLTPYAQP----PFP 199
Query: 60 ----KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQE 115
KL++RVV F R+K + L LE + P +RP +S++
Sbjct: 200 AKDVKLLQRVVRDAFNQRRKTLRNTLKGLISSEG-------LEALGLDPGIRPENVSLES 252
Query: 116 FGQICLAYRDMCEE 129
+ I A D E
Sbjct: 253 YVAIANAVGDAQEN 266
>gi|374703444|ref|ZP_09710314.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas sp. S9]
Length = 273
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 55/123 (44%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G RLSIM Q C V+H F + AF P P+ D +V P HP D
Sbjct: 145 LAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKFDSAIVRLVPHEVLPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
KL+ERVV F R+K + L P S +E A V LRP QL + F
Sbjct: 204 -HKLLERVVREAFNQRRKTLRNTLKALLP-------ASEIEAAGVDGSLRPEQLDLAAFV 255
Query: 118 QIC 120
++
Sbjct: 256 RLA 258
>gi|365154899|ref|ZP_09351297.1| ribosomal RNA small subunit methyltransferase A [Bacillus smithii
7_3_47FAA]
gi|363629010|gb|EHL79703.1| ribosomal RNA small subunit methyltransferase A [Bacillus smithii
7_3_47FAA]
Length = 291
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 59/121 (48%), Gaps = 3/121 (2%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-L 61
A G ++ LSI Q + F +P FIP+P VD V+H R P++++ +
Sbjct: 163 AQPGTKEYGSLSIAVQYYTEAKTAFVVPKTVFIPQPNVDSAVIHLKRRTKPLVEVDNESF 222
Query: 62 IERVVSCIFRYRQKQVYKPASLLFP--KRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
+V F R+K + + P K K++ ++++L A + P R LS+QEF ++
Sbjct: 223 FFSLVKAAFAQRRKTLINNLTSQMPNGKEKKEQILNILAEAEIDPSRRGESLSIQEFARL 282
Query: 120 C 120
Sbjct: 283 S 283
>gi|94499972|ref|ZP_01306507.1| dimethyladenosine transferase [Bermanella marisrubri]
gi|94427830|gb|EAT12805.1| dimethyladenosine transferase [Oceanobacter sp. RED65]
Length = 266
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 57/125 (45%), Gaps = 16/125 (12%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF- 59
+ A G RLSIM Q +C V H F + AF P P+VD +V P DLP+
Sbjct: 143 LAAGPGDNNYGRLSIMAQYYCQVQHMFDVGPGAFKPAPKVDSAIVRMVPHQ----DLPYP 198
Query: 60 ----KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQE 115
K ER+V F R+K L K+ + LE+ + P LRP +L + E
Sbjct: 199 VKDHKTFERIVRESFAMRRKT-------LRNNLKKTISSEELEKLGIDPALRPERLGLPE 251
Query: 116 FGQIC 120
+ +I
Sbjct: 252 YTRIA 256
>gi|448747055|ref|ZP_21728717.1| Ribosomal RNA adenine dimethylase [Halomonas titanicae BH1]
gi|445565215|gb|ELY21326.1| Ribosomal RNA adenine dimethylase [Halomonas titanicae BH1]
Length = 293
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 63/131 (48%), Gaps = 12/131 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPR--VHPIIDLP 58
+ A G RLS+M Q +C V+ F +P +AF+P+P+VD +V TP + D P
Sbjct: 163 LAAEPGGADWGRLSVMAQYYCQVEQLFIVPPEAFVPRPKVDSAIVRLTPHETLPHTADDP 222
Query: 59 FKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQ 118
L E +V F R+K + K ++ LE + PI RP L+V E+
Sbjct: 223 AMLFE-LVKLAFGQRRKTLRN-------NFKGRVSADTLEDLGIDPIRRPQTLTVAEY-- 272
Query: 119 ICLAYRDMCEE 129
+ +A R +E
Sbjct: 273 VAIANRVAADE 283
>gi|330812131|ref|YP_004356593.1| dimethyladenosine transferase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327380239|gb|AEA71589.1| putative dimethyladenosine transferase [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
Length = 272
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 57/123 (46%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 145 LAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPHAVLPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ERVV F R+K + LL L + +E A V LRP QL + F
Sbjct: 204 -HRMLERVVREAFNQRRKTLRNTLKLL-------LSSAEIEAAGVDGSLRPEQLDLAAFV 255
Query: 118 QIC 120
++
Sbjct: 256 RLA 258
>gi|66808105|ref|XP_637775.1| hypothetical protein DDB_G0286199 [Dictyostelium discoideum AX4]
gi|60466213|gb|EAL64275.1| hypothetical protein DDB_G0286199 [Dictyostelium discoideum AX4]
Length = 485
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 60/124 (48%), Gaps = 9/124 (7%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-- 60
A G E+ RLS+M Q C ++IPG AF+P P+VD VV PR+ P+ D P K
Sbjct: 185 AQVGSEEYSRLSVMVQQMCQPSIVYSIPGTAFVPPPKVDASVVAIEPRISPLGDEPVKDH 244
Query: 61 -LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
E V +F R+K++ L + SLL + P +R L +++F +I
Sbjct: 245 HYFEFVCRELFSQRRKKLSNTIKTLGKDAE-----SLL-GDDIDPKIRTQNLQIEQFVKI 298
Query: 120 CLAY 123
Y
Sbjct: 299 TNRY 302
>gi|229592954|ref|YP_002875073.1| dimethyladenosine transferase [Pseudomonas fluorescens SBW25]
gi|229364820|emb|CAY52848.1| dimethyladenosine transferase [Pseudomonas fluorescens SBW25]
Length = 270
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 145 LAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPHAVLPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
KL+ERVV F R+K + L + + +E A V LRP QL + F
Sbjct: 204 -HKLLERVVREAFNQRRKTLRNTLKALLSQAE-------IEAAGVDGSLRPEQLDLAAF 254
>gi|424925257|ref|ZP_18348618.1| dimethyladenosine transferase [Pseudomonas fluorescens R124]
gi|404306417|gb|EJZ60379.1| dimethyladenosine transferase [Pseudomonas fluorescens R124]
Length = 272
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 60/134 (44%), Gaps = 12/134 (8%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 145 LAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPHAVLPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+L+ERVV F R+K + K+ + + +E A V LRP QL + F
Sbjct: 204 -HRLLERVVREAFNQRRKTLRN-------TLKQLMTAAEIEAAGVDGSLRPEQLDLAAFV 255
Query: 118 QICLAYRDMCEEMP 131
++ + + P
Sbjct: 256 RLADKLSEQAPQAP 269
>gi|288958701|ref|YP_003449042.1| dimethyladenosine transferase [Azospirillum sp. B510]
gi|288911009|dbj|BAI72498.1| dimethyladenosine transferase [Azospirillum sp. B510]
Length = 291
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 61/131 (46%), Gaps = 7/131 (5%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A G + RLS++ Q + F +P +AF P P+V+ VVH TPR +P ++
Sbjct: 158 LVAKPGSKAYGRLSVITQWRSDARVLFNLPPRAFTPPPKVESTVVHLTPRANP-EPADWR 216
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
+E+V + F R+K + + L +LLE + P R ++ V F +
Sbjct: 217 ALEQVTAAAFGQRRKMLRQSLKSLGNAE------ALLEETGIAPTARAEEIDVAGFAALA 270
Query: 121 LAYRDMCEEMP 131
A+R P
Sbjct: 271 RAFRSWTPAAP 281
>gi|388467103|ref|ZP_10141313.1| dimethyladenosine transferase [Pseudomonas synxantha BG33R]
gi|388010683|gb|EIK71870.1| dimethyladenosine transferase [Pseudomonas synxantha BG33R]
Length = 270
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 53/119 (44%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 145 LAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPHAVLPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
KL+ERVV F R+K + L + +E A V LRP QL + F
Sbjct: 204 -HKLLERVVREAFNQRRKTLRNTLKALLSNAE-------IEAAGVDGSLRPEQLDLAAF 254
>gi|410665593|ref|YP_006917964.1| dimethyladenosine transferase [Simiduia agarivorans SA1 = DSM
21679]
gi|409027950|gb|AFV00235.1| dimethyladenosine transferase [Simiduia agarivorans SA1 = DSM
21679]
Length = 265
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 7/114 (6%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFKLI 62
A G + RLS+M Q WC+V++ FT+P + F P P+VD +V PR + L+
Sbjct: 145 AEPGTKAYGRLSVMVQYWCDVEYLFTVPPECFDPAPKVDSAIVRLVPRAPAVHAEDLALL 204
Query: 63 ERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+++V+ F R+K + K+ L L + + RP + V EF
Sbjct: 205 QKLVTTAFSLRRKTLRN-------SLKQMLDADQLAQVEIDTSRRPETIGVWEF 251
>gi|312963419|ref|ZP_07777901.1| dimethyladenosine transferase [Pseudomonas fluorescens WH6]
gi|311282225|gb|EFQ60824.1| dimethyladenosine transferase [Pseudomonas fluorescens WH6]
Length = 270
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 53/119 (44%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 145 LAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPHAVLPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
KL+ERVV F R+K + L + +E A V LRP QL + F
Sbjct: 204 -HKLLERVVREAFNQRRKTLRNTLKALLSNAE-------IEAAGVDGSLRPEQLDLAAF 254
>gi|398853804|ref|ZP_10610396.1| dimethyladenosine transferase [Pseudomonas sp. GM80]
gi|398238421|gb|EJN24150.1| dimethyladenosine transferase [Pseudomonas sp. GM80]
Length = 272
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 55/119 (46%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 145 LAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPHAVLPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
KL+ERVV F R+K + K+ L + +E A V LRP QL + F
Sbjct: 204 -HKLLERVVREAFNQRRKTLRN-------TLKQLLSNAEIEAAGVDGSLRPEQLDLAAF 254
>gi|447918645|ref|YP_007399213.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas poae RE*1-1-14]
gi|445202508|gb|AGE27717.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas poae RE*1-1-14]
Length = 270
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 53/119 (44%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 145 LAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPHAVLPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
KL+ERVV F R+K + L + +E A V LRP QL + F
Sbjct: 204 -HKLLERVVREAFNQRRKTLRNTLKALLSNAE-------IEAAGVDGSLRPEQLDLAAF 254
>gi|440737963|ref|ZP_20917513.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas fluorescens BRIP34879]
gi|440381538|gb|ELQ18065.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas fluorescens BRIP34879]
Length = 270
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 53/119 (44%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 145 LAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPHAVLPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
KL+ERVV F R+K + L + +E A V LRP QL + F
Sbjct: 204 -HKLLERVVREAFNQRRKTLRNTLKALLSNAE-------IEAAGVDGSLRPEQLDLAAF 254
>gi|52843122|ref|YP_096921.1| dimethyladenosine transferase [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|378778808|ref|YP_005187250.1| dimethyladenosine transferase [Legionella pneumophila subsp.
pneumophila ATCC 43290]
gi|62900493|sp|Q5ZRF4.1|RSMA_LEGPH RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|52630233|gb|AAU28974.1| dimethyladenosine transferase [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|364509626|gb|AEW53150.1| dimethyladenosine transferase [Legionella pneumophila subsp.
pneumophila ATCC 43290]
Length = 256
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 8/119 (6%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPFKL 61
A G + RLS+M Q C V++ F +P +AF P+P+VD +V TP RV P + +
Sbjct: 140 AAHGTKAYGRLSVMLQYHCEVEYLFDVPPEAFEPRPKVDSAIVRLTPYRVSPFESVNTEK 199
Query: 62 IERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
+E +V+ F R+K L K + +S L + RP Q+SV E+ Q+
Sbjct: 200 LENIVAKAFAMRRKT-------LTNNLKGIISLSQLNDLGIDGGKRPEQISVAEYVQLA 251
>gi|359396030|ref|ZP_09189082.1| Ribosomal RNA small subunit methyltransferase A [Halomonas
boliviensis LC1]
gi|357970295|gb|EHJ92742.1| Ribosomal RNA small subunit methyltransferase A [Halomonas
boliviensis LC1]
Length = 285
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 65/133 (48%), Gaps = 16/133 (12%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPII----D 56
+ A G RLS+M Q +C V+ F +P +AF+P+P+VD +V TP H I+ D
Sbjct: 155 LAAEPGGADWGRLSVMAQYYCQVEQLFIVPPEAFVPRPKVDSAIVRLTP--HEILPYTAD 212
Query: 57 LPFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
P L E +V F R+K + K ++ LE + PI RP L+V E+
Sbjct: 213 DPALLFE-LVKLAFGQRRKTLRN-------NFKGRVSPDTLEGLGIDPIRRPQTLTVAEY 264
Query: 117 GQICLAYRDMCEE 129
+ +A R +E
Sbjct: 265 --VAIANRVAADE 275
>gi|395495209|ref|ZP_10426788.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas sp. PAMC 25886]
Length = 270
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 53/119 (44%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 145 LAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPHAVLPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
KL+ERVV F R+K + L + +E A V LRP QL + F
Sbjct: 204 -HKLLERVVREAFNQRRKTLRNTLKALLSNAE-------IEAAGVDGSLRPEQLDLAAF 254
>gi|398967697|ref|ZP_10682047.1| dimethyladenosine transferase [Pseudomonas sp. GM30]
gi|398144458|gb|EJM33290.1| dimethyladenosine transferase [Pseudomonas sp. GM30]
Length = 272
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 55/119 (46%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 145 LAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPHAVLPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
KL+ERVV F R+K + K+ L + +E A V LRP QL + F
Sbjct: 204 -HKLLERVVREAFNQRRKTLRN-------TLKQLLSNAEIEAAGVDGSLRPEQLDLAAF 254
>gi|398983244|ref|ZP_10689916.1| dimethyladenosine transferase [Pseudomonas sp. GM24]
gi|399011946|ref|ZP_10714275.1| dimethyladenosine transferase [Pseudomonas sp. GM16]
gi|398116956|gb|EJM06712.1| dimethyladenosine transferase [Pseudomonas sp. GM16]
gi|398157430|gb|EJM45819.1| dimethyladenosine transferase [Pseudomonas sp. GM24]
Length = 272
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 55/119 (46%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 145 LAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPHAVLPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
KL+ERVV F R+K + K+ L + +E A V LRP QL + F
Sbjct: 204 -HKLLERVVREAFNQRRKTLRN-------TLKQLLSNAEIEAAGVDGSLRPEQLDLAAF 254
>gi|338994472|ref|ZP_08635188.1| dimethyladenosine transferase [Halomonas sp. TD01]
gi|338766756|gb|EGP21672.1| dimethyladenosine transferase [Halomonas sp. TD01]
Length = 276
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 58/122 (47%), Gaps = 10/122 (8%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPR--VHPIIDLP 58
+ A G RLS+M Q +C+VD F +P +AF+P+P+VD +V TP + D P
Sbjct: 146 LAAEPGSTDWGRLSVMAQYYCHVDQLFIVPPEAFVPRPKVDSAIVRLTPHESLPQTADDP 205
Query: 59 FKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQ 118
L E +V F R+K + K ++ LE + P RP L+V E+
Sbjct: 206 ALLFE-LVKLAFGQRRKTLRN-------NLKGRVSAETLEALGIDPARRPQTLTVAEYVT 257
Query: 119 IC 120
I
Sbjct: 258 IA 259
>gi|395796297|ref|ZP_10475595.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas sp. Ag1]
gi|421139613|ref|ZP_15599647.1| dimethyladenosine transferase [Pseudomonas fluorescens BBc6R8]
gi|395339599|gb|EJF71442.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas sp. Ag1]
gi|404509185|gb|EKA23121.1| dimethyladenosine transferase [Pseudomonas fluorescens BBc6R8]
Length = 270
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 53/119 (44%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 145 LAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPHAVLPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
KL+ERVV F R+K + L + +E A V LRP QL + F
Sbjct: 204 -HKLLERVVREAFNQRRKTLRNTLKALLSNAE-------IEAAGVDGSLRPEQLDLAAF 254
>gi|352100240|ref|ZP_08958047.1| dimethyladenosine transferase [Halomonas sp. HAL1]
gi|350601265|gb|EHA17314.1| dimethyladenosine transferase [Halomonas sp. HAL1]
Length = 275
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 65/132 (49%), Gaps = 14/132 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G RLS+M Q +CNV+ F +P +AF+P+P+V+ +V TP H D
Sbjct: 145 LAAEPGGADWGRLSVMAQYYCNVEQLFIVPPEAFVPQPKVESAIVRLTPHATLPHTAED- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
P L E +V F R+K + K ++ +LE + PI RP L+V E+
Sbjct: 204 PTLLFE-LVKLAFGQRRKTLRN-------NFKGRVSPEILEALGIDPIRRPQTLTVAEY- 254
Query: 118 QICLAYRDMCEE 129
+ +A R +E
Sbjct: 255 -VAIANRVAADE 265
>gi|423693908|ref|ZP_17668428.1| dimethyladenosine transferase [Pseudomonas fluorescens SS101]
gi|388001371|gb|EIK62700.1| dimethyladenosine transferase [Pseudomonas fluorescens SS101]
Length = 270
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 53/119 (44%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 145 LAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPHAVLPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
KL+ERVV F R+K + L + +E A V LRP QL + F
Sbjct: 204 -HKLLERVVREAFNQRRKTLRNTLKALLSNAE-------IEAAGVDGGLRPEQLDLAAF 254
>gi|408479337|ref|ZP_11185556.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas sp. R81]
Length = 270
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 53/119 (44%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 145 LAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPHAVLPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
KL+ERVV F R+K + L + +E A V LRP QL + F
Sbjct: 204 -HKLLERVVREAFNQRRKTLRNTLKALLSNAE-------IEAAGVDGGLRPEQLDLAAF 254
>gi|54295765|ref|YP_128180.1| dimethyladenosine transferase [Legionella pneumophila str. Lens]
gi|62900486|sp|Q5WSM3.1|RSMA_LEGPL RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|53755597|emb|CAH17099.1| hypothetical protein lpl2855 [Legionella pneumophila str. Lens]
gi|307611813|emb|CBX01526.1| hypothetical protein LPW_32131 [Legionella pneumophila 130b]
Length = 256
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 8/119 (6%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPFKL 61
A G + RLS+M Q C V++ F +P +AF P+P+VD +V TP RV P + +
Sbjct: 140 AAHGTKAYGRLSVMLQYHCEVEYLFDVPPEAFEPRPKVDSAIVRLTPHRVSPFESVNTEK 199
Query: 62 IERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
+E +V+ F R+K L K + +S L + RP Q+SV E+ Q+
Sbjct: 200 LENIVAKAFAMRRKT-------LTNNLKGIISLSQLNDLGIDGGKRPEQISVAEYVQLA 251
>gi|373859308|ref|ZP_09602038.1| dimethyladenosine transferase [Bacillus sp. 1NLA3E]
gi|372450977|gb|EHP24458.1| dimethyladenosine transferase [Bacillus sp. 1NLA3E]
Length = 293
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 7/125 (5%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHP---IIDL 57
+ A G + LSI Q + + T+P F+P+P VD V+ T R +P +ID
Sbjct: 162 ITANPGTKDYGSLSIAVQYYTKAEIVMTVPKTVFVPQPNVDSAVIRLTVRENPPVTMIDE 221
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFP--KRKRQLVVSLLERACVKPILRPYQLSVQE 115
F RV+ F R+K + + P K K++ +V LE+A + P R LS++E
Sbjct: 222 AFFF--RVIKMSFAQRRKTILNNLTSQLPNGKEKKESIVLALEQANIDPRRRGETLSIEE 279
Query: 116 FGQIC 120
F ++
Sbjct: 280 FARLS 284
>gi|387895972|ref|YP_006326269.1| dimethyladenosine transferase [Pseudomonas fluorescens A506]
gi|387162785|gb|AFJ57984.1| dimethyladenosine transferase [Pseudomonas fluorescens A506]
Length = 270
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 53/119 (44%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 145 LAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPHAVLPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
KL+ERVV F R+K + L + +E A V LRP QL + F
Sbjct: 204 -HKLLERVVREAFNQRRKTLRNTLKALLSNAE-------IEAAGVDGGLRPEQLDLAAF 254
>gi|26987143|ref|NP_742568.1| dimethyladenosine transferase [Pseudomonas putida KT2440]
gi|386010061|ref|YP_005928338.1| KsgA [Pseudomonas putida BIRD-1]
gi|395446781|ref|YP_006387034.1| dimethyladenosine transferase [Pseudomonas putida ND6]
gi|397694911|ref|YP_006532792.1| Dimethyladenosine transferase [Pseudomonas putida DOT-T1E]
gi|421524947|ref|ZP_15971568.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas putida LS46]
gi|33516928|sp|Q88QT6.1|RSMA_PSEPK RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|24981775|gb|AAN66032.1|AE016232_5 dimethyladenosine transferase [Pseudomonas putida KT2440]
gi|313496767|gb|ADR58133.1| KsgA [Pseudomonas putida BIRD-1]
gi|388560778|gb|AFK69919.1| dimethyladenosine transferase [Pseudomonas putida ND6]
gi|397331641|gb|AFO48000.1| Dimethyladenosine transferase [Pseudomonas putida DOT-T1E]
gi|402751410|gb|EJX11923.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas putida LS46]
Length = 267
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 55/119 (46%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
M A G RLSIM Q C V+H F + AF P P+VD +V P H ++ P K
Sbjct: 145 MAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVP--HEVLPFPAK 202
Query: 61 ---LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
L+ERVV F R+K + L L + +E A V LRP QL + F
Sbjct: 203 DHLLLERVVREAFNQRRKTLRNTMKGL-------LDSAAIEAAGVDGSLRPEQLDLAAF 254
>gi|148545687|ref|YP_001265789.1| dimethyladenosine transferase [Pseudomonas putida F1]
gi|148509745|gb|ABQ76605.1| dimethyladenosine transferase [Pseudomonas putida F1]
Length = 267
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 55/119 (46%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
M A G RLSIM Q C V+H F + AF P P+VD +V P H ++ P K
Sbjct: 145 MAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVP--HEVLPFPAK 202
Query: 61 ---LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
L+ERVV F R+K + L L + +E A V LRP QL + F
Sbjct: 203 DHLLLERVVREAFNQRRKTLRNTMKGL-------LDSAAIEAAGVDGSLRPEQLDLAAF 254
>gi|392377604|ref|YP_004984763.1| dimethyladenosine transferase (S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase) (16S rRNA
dimethylase) (High level kasugamycin resistance protein
ksgA) (Kasugamycin dimethyltransferase) [Azospirillum
brasilense Sp245]
gi|356879085|emb|CCC99983.1| dimethyladenosine transferase (S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase) (16S rRNA
dimethylase) (High level kasugamycin resistance protein
ksgA) (Kasugamycin dimethyltransferase) [Azospirillum
brasilense Sp245]
Length = 288
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 61/124 (49%), Gaps = 7/124 (5%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A G + RLS++ Q + F +P KAF P P+V+ +VH TPR +P +K
Sbjct: 170 LVAKPGSKAYGRLSVITQWRSDARVLFNLPAKAFTPPPKVESTIVHLTPRANP-EPAEWK 228
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
+E+V + F R+K + + L +LL A ++P R ++ V F +
Sbjct: 229 ALEQVTAAAFGQRRKMLRQSLKSLGNAE------ALLAAAGIEPTARAEEVDVAGFAALA 282
Query: 121 LAYR 124
A++
Sbjct: 283 RAFK 286
>gi|399007391|ref|ZP_10709901.1| dimethyladenosine transferase [Pseudomonas sp. GM17]
gi|425901934|ref|ZP_18878525.1| dimethyladenosine transferase [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|397892756|gb|EJL09233.1| dimethyladenosine transferase [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|398120363|gb|EJM10027.1| dimethyladenosine transferase [Pseudomonas sp. GM17]
Length = 272
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 145 LAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPHAVLPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+L+ER+V F R+K + L L + +E A V LRP QL + F
Sbjct: 204 -HRLLERIVREAFNQRRKTLRNTLKAL-------LTSAEIEAAGVDGSLRPEQLDLAAF 254
>gi|254491379|ref|ZP_05104558.1| dimethyladenosine transferase [Methylophaga thiooxidans DMS010]
gi|224462857|gb|EEF79127.1| dimethyladenosine transferase [Methylophaga thiooxydans DMS010]
Length = 266
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 65/124 (52%), Gaps = 12/124 (9%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP---RVHPIIDLPF 59
A G +Q RLSIM Q+ C + FT+P +AF P P+V+ +++ P RV +DL
Sbjct: 146 AQPGNKQYGRLSIMMQHQCQAELLFTVPPEAFEPAPKVESAIIYLQPLKQRVGGEVDL-- 203
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
++ ++V+ F R+K + A+ L K + + E+ + P RP +SV+ F +
Sbjct: 204 DVMGKLVTTAFSQRRKTI---ANTL----KNMITTEVFEQVGIDPTQRPETVSVESFVAL 256
Query: 120 CLAY 123
AY
Sbjct: 257 TRAY 260
>gi|402700967|ref|ZP_10848946.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas fragi A22]
Length = 272
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 53/119 (44%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
M A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 145 MAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPHEVLPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+L+ERVV F R+K + L + +E A V LRP QL + F
Sbjct: 204 -HRLLERVVREAFNQRRKTLRNTLKALLSNAE-------IEAAGVDGSLRPEQLDLAAF 254
>gi|302342375|ref|YP_003806904.1| dimethyladenosine transferase [Desulfarculus baarsii DSM 2075]
gi|301638988|gb|ADK84310.1| dimethyladenosine transferase [Desulfarculus baarsii DSM 2075]
Length = 284
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 56/127 (44%), Gaps = 6/127 (4%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPI---IDL 57
+ A G + RL +M Q+ C V T+ F P+P V +VH TP P+ + L
Sbjct: 153 LAAKPGGKDWGRLGVMVQSLCQVRAGVTLSRGQFFPEPNVSSQIVHLTPLEQPLPAALGL 212
Query: 58 PFKLIERVVSCIFRYRQKQVYKP-ASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+VV F R+K V A L +R R V L RA V P R LS+ E
Sbjct: 213 SQAWFGQVVKAAFGQRRKTVANALAGGLGLERGR--VEDALGRAAVAPSRRAETLSIAEL 270
Query: 117 GQICLAY 123
G I LA
Sbjct: 271 GAIALAL 277
>gi|418071100|ref|ZP_12708374.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Lactobacillus rhamnosus R0011]
gi|423080252|ref|ZP_17068877.1| dimethyladenosine transferase [Lactobacillus rhamnosus ATCC 21052]
gi|357538594|gb|EHJ22614.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Lactobacillus rhamnosus R0011]
gi|357543317|gb|EHJ25348.1| dimethyladenosine transferase [Lactobacillus rhamnosus ATCC 21052]
Length = 294
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 1/123 (0%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF-KL 61
AT G + LSI Q +V FT+ AF+P P VD +V T R P+ +
Sbjct: 164 ATPGSKDYGSLSIAVQLVADVTTAFTVSRHAFVPAPNVDSAIVTLTQRPEPLAAVKNPDS 223
Query: 62 IERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQICL 121
+R+V F R+K ++ LF K + + + L A + P R QL++ +F ++
Sbjct: 224 FDRLVRGAFASRRKTLWNNLVALFGKPNKDAIRTALSVAEIAPETRAEQLAIADFARLDE 283
Query: 122 AYR 124
A R
Sbjct: 284 ALR 286
>gi|77461356|ref|YP_350863.1| dimethyladenosine transferase [Pseudomonas fluorescens Pf0-1]
gi|118600888|sp|Q3K5T2.1|RSMA_PSEPF RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|77385359|gb|ABA76872.1| dimethyladenosine transferase [Pseudomonas fluorescens Pf0-1]
Length = 272
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 60/134 (44%), Gaps = 16/134 (11%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 145 LAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPHAVLPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+L+ERVV F R+K + K+ L + +E A V LRP QL + F
Sbjct: 204 -HRLLERVVREAFNQRRKTLRNTL-------KQLLSNAEIEAAGVDGSLRPEQLDLAAFV 255
Query: 118 QICLAYRDMCEEMP 131
++ D E P
Sbjct: 256 RLA----DKLAEQP 265
>gi|398981221|ref|ZP_10689405.1| dimethyladenosine transferase [Pseudomonas sp. GM25]
gi|398133939|gb|EJM23120.1| dimethyladenosine transferase [Pseudomonas sp. GM25]
Length = 272
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 60/134 (44%), Gaps = 16/134 (11%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 145 LAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPHAVLPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+L+ERVV F R+K + K+ L + +E A V LRP QL + F
Sbjct: 204 -HRLLERVVREAFNQRRKTLRNTL-------KQLLSNAEIEAAGVDGSLRPEQLDLAAFV 255
Query: 118 QICLAYRDMCEEMP 131
++ D E P
Sbjct: 256 RLA----DKLAEQP 265
>gi|355571047|ref|ZP_09042317.1| Ribosomal RNA small subunit methyltransferase A [Methanolinea tarda
NOBI-1]
gi|354826329|gb|EHF10545.1| Ribosomal RNA small subunit methyltransferase A [Methanolinea tarda
NOBI-1]
Length = 256
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 62/126 (49%), Gaps = 11/126 (8%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPR--VHPIIDLP 58
M+A G + RLS+M Q +C V F +P +AF P+P+V V+H PR + PI D
Sbjct: 131 MLAPAGTPECGRLSVMVQTYCAVGRVFDVPPQAFSPRPKVRSTVLHIVPREPLFPIRDR- 189
Query: 59 FKLIERVVSCIFRYRQKQVYK----PASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQ 114
L RVV +F +R+K V S+L LV +L E RP +L ++
Sbjct: 190 -DLYARVVRALFSHRRKTVRNSLKSAGSMLESGLAEFLVKNLPEEILAA---RPEELYLE 245
Query: 115 EFGQIC 120
+F I
Sbjct: 246 DFATIA 251
>gi|325276041|ref|ZP_08141856.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas sp. TJI-51]
gi|324098826|gb|EGB96857.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas sp. TJI-51]
Length = 267
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 55/119 (46%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
M A G RLSIM Q C V+H F + AF P P+VD +V P H ++ P K
Sbjct: 145 MAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVP--HEVLPHPAK 202
Query: 61 ---LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
L+ERVV F R+K + L L + +E A V LRP QL + F
Sbjct: 203 DAQLLERVVRDAFNQRRKTLRNTMKGL-------LDSAAIEAAGVDGSLRPEQLDLAAF 254
>gi|406990916|gb|EKE10513.1| dimethyladenosine transferase [uncultured bacterium]
Length = 274
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 61/119 (51%), Gaps = 6/119 (5%)
Query: 12 RLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFKLIERVVSCIFR 71
RLS+MCQ V F +P AF P P+V V+H TPR P D+ + ++E+V F
Sbjct: 160 RLSVMCQWKAKVQKLFDLPPGAFTPSPKVTSTVLHLTPRF-PREDISWAVLEKVTKAAFS 218
Query: 72 YRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQICLAYRDMCEEM 130
+R+K + +SL K ++LLE+ + P R L+VQ+F + Y + M
Sbjct: 219 HRRKMLR--SSL---KSLTLSPLTLLEKTHINPESRAETLTVQDFCHLAQEYDKLIPTM 272
>gi|229551483|ref|ZP_04440208.1| dimethyladenosine transferase [Lactobacillus rhamnosus LMS2-1]
gi|258540770|ref|YP_003175269.1| dimethyladenosine transferase [Lactobacillus rhamnosus Lc 705]
gi|385836481|ref|YP_005874256.1| dimethyladenosine transferase [Lactobacillus rhamnosus ATCC 8530]
gi|229315166|gb|EEN81139.1| dimethyladenosine transferase [Lactobacillus rhamnosus LMS2-1]
gi|257152446|emb|CAR91418.1| Dimethyladenosine transferase [Lactobacillus rhamnosus Lc 705]
gi|355395973|gb|AER65403.1| dimethyladenosine transferase [Lactobacillus rhamnosus ATCC 8530]
Length = 294
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 1/123 (0%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF-KL 61
AT G + LSI Q +V FT+ AF+P P VD +V T R P+ +
Sbjct: 164 ATPGSKDYGSLSIAVQLVADVATAFTVSRHAFVPAPNVDSAIVTLTQRPEPLAAVKNPDS 223
Query: 62 IERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQICL 121
+R+V F R+K ++ LF K + + + L A + P R QL++ +F ++
Sbjct: 224 FDRLVRGAFASRRKTLWNNLVALFGKPNKAAIRTALSVAEIAPETRAEQLAITDFARLDE 283
Query: 122 AYR 124
A R
Sbjct: 284 ALR 286
>gi|389680946|ref|ZP_10172292.1| dimethyladenosine transferase [Pseudomonas chlororaphis O6]
gi|388555235|gb|EIM18482.1| dimethyladenosine transferase [Pseudomonas chlororaphis O6]
Length = 272
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 53/119 (44%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 145 LAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPHAVLPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+L+ER+V F R+K + L + +E A V LRP QL + F
Sbjct: 204 -HRLLERIVREAFNQRRKTLRNTLKALLSSAE-------IEAAGVDGSLRPEQLDLAAF 254
>gi|70732937|ref|YP_262708.1| dimethyladenosine transferase [Pseudomonas protegens Pf-5]
gi|118600886|sp|Q4K4X5.1|RSMA_PSEF5 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|68347236|gb|AAY94842.1| dimethyladenosine transferase [Pseudomonas protegens Pf-5]
Length = 270
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 145 LAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPHAVLPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+L+ER+V F R+K + L L + +E A V LRP QL + F
Sbjct: 204 -HRLLERIVREAFNQRRKTLRNTLKAL-------LSSAEIEAAGVDGSLRPEQLDLAAF 254
>gi|398875249|ref|ZP_10630427.1| dimethyladenosine transferase [Pseudomonas sp. GM67]
gi|398883045|ref|ZP_10638006.1| dimethyladenosine transferase [Pseudomonas sp. GM60]
gi|398197618|gb|EJM84594.1| dimethyladenosine transferase [Pseudomonas sp. GM60]
gi|398208179|gb|EJM94917.1| dimethyladenosine transferase [Pseudomonas sp. GM67]
Length = 272
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 53/119 (44%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 145 LAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPHAVLPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+L+ERVV F R+K + LL + + A V LRP QL + F
Sbjct: 204 -HRLLERVVREAFNQRRKTLRNTLKLLLSNDE-------ITAAGVDGSLRPEQLDLAAF 254
>gi|404398415|ref|ZP_10989999.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas fuscovaginae UPB0736]
Length = 272
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 59/135 (43%), Gaps = 12/135 (8%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 145 LAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPHAVLPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+L+ERVV F R+K + L L + +E A V LRP QL + F
Sbjct: 204 -HRLLERVVREAFNQRRKTLRNTLKAL-------LGSAEIEAAGVDGSLRPEQLDLAAFV 255
Query: 118 QICLAYRDMCEEMPG 132
++ + + P
Sbjct: 256 RLADKLSEQAAQPPA 270
>gi|270158275|ref|ZP_06186932.1| dimethyladenosine transferase [Legionella longbeachae D-4968]
gi|289163469|ref|YP_003453607.1| dimethyladenosine transferase (16S rRNA dimethylase) [Legionella
longbeachae NSW150]
gi|269990300|gb|EEZ96554.1| dimethyladenosine transferase [Legionella longbeachae D-4968]
gi|288856642|emb|CBJ10453.1| putative dimethyladenosine transferase (16S rRNA dimethylase)
[Legionella longbeachae NSW150]
Length = 256
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 58/121 (47%), Gaps = 8/121 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPF 59
M A G + RL++M Q C V+H F +P +AF PKP+VD VV P R+ P +
Sbjct: 138 MAAQPGCKAYGRLTVMLQYHCTVEHLFDVPPEAFDPKPKVDSAVVRLVPHRISPFEQIAV 197
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
+ +E +V+ F R+K + K + L + RP Q+S+ E+ Q+
Sbjct: 198 ERLEYLVAHAFAMRRKTLNN-------NLKGLITADQLHDLGIDGSRRPEQISISEYVQL 250
Query: 120 C 120
Sbjct: 251 A 251
>gi|307546072|ref|YP_003898551.1| dimethyladenosine transferase [Halomonas elongata DSM 2581]
gi|307218096|emb|CBV43366.1| dimethyladenosine transferase [Halomonas elongata DSM 2581]
Length = 268
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 58/121 (47%), Gaps = 8/121 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPR-VHPIIDLPF 59
+ A G +R RLS++ Q C V+ FT+P +AF+P+P+V+ +V TP P L
Sbjct: 147 LAAEPGGTERGRLSVLAQYHCRVESLFTVPPEAFVPRPKVESAIVRLTPHETPPHRALDE 206
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
L+ VV F R+K + K +L L + P RP LSV EF +I
Sbjct: 207 SLMFEVVREAFAQRRKTLRN-------NLKSRLSGEALSALDIDPGRRPQTLSVAEFVRI 259
Query: 120 C 120
Sbjct: 260 A 260
>gi|398844539|ref|ZP_10601601.1| dimethyladenosine transferase [Pseudomonas sp. GM84]
gi|398254476|gb|EJN39571.1| dimethyladenosine transferase [Pseudomonas sp. GM84]
Length = 266
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
M A G RLSIM Q C V+H F + AF P P+VD +V P H ++ P K
Sbjct: 145 MAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVP--HEVLPYPAK 202
Query: 61 ---LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
L+ERVV F R+K + L + +E A V LRP QL + F
Sbjct: 203 DHLLLERVVREAFNQRRKTLRNTLKGLLDSQA-------IEAAGVDGSLRPEQLDLAAF 254
>gi|299536734|ref|ZP_07050044.1| dimethyladenosine transferase [Lysinibacillus fusiformis ZC1]
gi|424740007|ref|ZP_18168419.1| dimethyladenosine transferase [Lysinibacillus fusiformis ZB2]
gi|298727848|gb|EFI68413.1| dimethyladenosine transferase [Lysinibacillus fusiformis ZC1]
gi|422946379|gb|EKU40790.1| dimethyladenosine transferase [Lysinibacillus fusiformis ZB2]
Length = 293
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHP---IIDL 57
+ A G ++ LSI Q + D T+P F+P+P VD V+ P +ID
Sbjct: 162 ITAKPGTKEYGSLSIAIQYYVKADIAMTVPKTVFMPQPNVDSAVIRLIKHEEPPVKVIDE 221
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQL--VVSLLERACVKPILRPYQLSVQE 115
F + V F R+K +Y P K Q ++ LE A ++P R LS+QE
Sbjct: 222 DFLFV--VTRASFVQRRKTIYNNLQSGLPNGKAQKDHILQALELANIEPTRRGETLSIQE 279
Query: 116 FGQICLA 122
FG++ A
Sbjct: 280 FGKLADA 286
>gi|297180114|gb|ADI16337.1| dimethyladenosine transferase (rRNA methylation) [uncultured
bacterium HF130_01F24]
Length = 277
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 8/123 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF- 59
M++ G + RL +M Q +C ++H F I AF+P+P+V + P P +
Sbjct: 154 MVSKVGSKSYGRLGLMVQYYCEIEHLFNIASDAFVPRPKVVSALARLKPHKSPTVTAKDP 213
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
+ ++ V+ F R+K + S L + SLLE V LRP L++Q++ +I
Sbjct: 214 ECLKTVIQTAFNQRRKTIRNSLSTLVSE-------SLLEEIPVNNKLRPENLTLQDYVRI 266
Query: 120 CLA 122
A
Sbjct: 267 SDA 269
>gi|319891446|ref|YP_004148321.1| Dimethyladenosine transferase [Staphylococcus pseudintermedius
HKU10-03]
gi|386320213|ref|YP_006016376.1| dimethyladenosine transferase [Staphylococcus pseudintermedius
ED99]
gi|317161142|gb|ADV04685.1| Dimethyladenosine transferase [Staphylococcus pseudintermedius
HKU10-03]
gi|323465384|gb|ADX77537.1| dimethyladenosine transferase [Staphylococcus pseudintermedius
ED99]
Length = 296
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 3/120 (2%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF-KL 61
A G + LSI+ Q + T+P F+P P VD VV R PI+D+
Sbjct: 165 AQVGTKAYGSLSIVAQYYTETSRVLTVPKTVFMPPPNVDSIVVKLMKRESPIVDVDNPNA 224
Query: 62 IERVVSCIFRYRQKQVYKPASLLFP--KRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
++ F R+K +Y LF K +++ ++ LERA + P R LS+QE+ ++
Sbjct: 225 FFKMTKGAFSQRRKTIYNNYQNLFENGKEQKETIMQWLERADIDPKRRGETLSIQEYARL 284
>gi|281200359|gb|EFA74579.1| Dimethyladenosine transferase [Polysphondylium pallidum PN500]
Length = 410
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 8/126 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+IA + RL++M Q C+ + +PGK F+P P+VD VV+ P+V PI DL K
Sbjct: 178 IIAPVSSHEYGRLAVMIQQECDSKVVYDLPGKVFVPPPKVDASVVYIEPKVKPIGDLKSK 237
Query: 61 -LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
+E V +F ++K + L + SL+E + P RP L+V+E +I
Sbjct: 238 EYLEYVCRELFTQKRKTLGNAIKCLGNGAE-----SLIE--GIDPTKRPQNLTVEELVKI 290
Query: 120 CLAYRD 125
+ D
Sbjct: 291 SNRFND 296
>gi|427428825|ref|ZP_18918864.1| Dimethyladenosine transferase [Caenispirillum salinarum AK4]
gi|425881488|gb|EKV30175.1| Dimethyladenosine transferase [Caenispirillum salinarum AK4]
Length = 290
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 4/105 (3%)
Query: 12 RLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFKLIERVVSCIFR 71
RLS++ Q C+V+ F I +AF P P+V VV+ TPR P+ D F +E+V + F
Sbjct: 183 RLSVITQWLCHVEPVFDINPRAFTPPPKVVSTVVNLTPRSQPLCDADFATLEKVTAAAFG 242
Query: 72 YRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
R+K + L + RA + P R +LSV++F
Sbjct: 243 QRRKMLRASLKTLAGGDGE----APCARAGLAPTARAEELSVEDF 283
>gi|406705886|ref|YP_006756239.1| dimethyladenosine transferase [alpha proteobacterium HIMB5]
gi|406651662|gb|AFS47062.1| dimethyladenosine transferase [alpha proteobacterium HIMB5]
Length = 263
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 60/127 (47%), Gaps = 7/127 (5%)
Query: 1 MIATEGMEQRCRLSIMCQNW-CNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF 59
+IA E Q RL+I+ NW N+ F I +F PKP++D V+HF+P+ +
Sbjct: 141 IIAKENTSQFGRLAILM-NWRLNIKKVFDIGPNSFSPKPKIDSSVLHFSPKNNFQRFKNS 199
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
K IE V F R+K + P LF K + + + LRP LS+ +F +I
Sbjct: 200 KSIEIVTRTFFNQRRKMIKNPLKQLFKNPK-----EISNKLNIDLNLRPQNLSILKFYEI 254
Query: 120 CLAYRDM 126
Y +
Sbjct: 255 ISEYEKL 261
>gi|354807516|ref|ZP_09040981.1| dimethyladenosine transferase [Lactobacillus curvatus CRL 705]
gi|354513970|gb|EHE85952.1| dimethyladenosine transferase [Lactobacillus curvatus CRL 705]
Length = 297
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 60/123 (48%), Gaps = 3/123 (2%)
Query: 6 GMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIER 64
G + LSI Q V+ F +P AF+P+P VD +V R P++ + + L ++
Sbjct: 166 GSKAYGSLSIAVQLHSEVNLAFIVPKTAFMPQPNVDSAIVELVGRKAPLVTVDNQTLFDQ 225
Query: 65 VVSCIFRYRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEFGQICLA 122
+V F R+K ++ F K+ + + + LE + P R QLS+Q+F Q+ A
Sbjct: 226 LVRGAFAQRRKTLWNNLQNQFGKQDEVKAALTTALEAVEIAPSARAEQLSIQQFAQLSDA 285
Query: 123 YRD 125
+
Sbjct: 286 LNN 288
>gi|104779701|ref|YP_606199.1| dimethyladenosine transferase [Pseudomonas entomophila L48]
gi|95108688|emb|CAK13382.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase,
kasugamycin resistance [Pseudomonas entomophila L48]
Length = 266
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
M A G RLSIM Q C V+H F + AF P P+VD +V P H ++ P K
Sbjct: 145 MAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVP--HEVLPHPAK 202
Query: 61 ---LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
L+ERVV F R+K + L + +E A V LRP QL + F
Sbjct: 203 DPLLLERVVREAFNQRRKTLRNTLKGLLDSQA-------IEAAGVDGSLRPEQLDLAAF 254
>gi|319654955|ref|ZP_08009029.1| dimethyladenosine transferase [Bacillus sp. 2_A_57_CT2]
gi|317393380|gb|EFV74144.1| dimethyladenosine transferase [Bacillus sp. 2_A_57_CT2]
Length = 292
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 3/120 (2%)
Query: 6 GMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIER 64
G ++ LSI Q + + +P F+P+P VD V+ T R P + + + +
Sbjct: 167 GTKEYGSLSIAVQYYTEAETAMIVPKTVFVPQPNVDSAVIKLTKRKEPAVAVKSESFFFK 226
Query: 65 VVSCIFRYRQKQVYKPASLLFP--KRKRQLVVSLLERACVKPILRPYQLSVQEFGQICLA 122
V F R+K + + P K+K++ ++S LE+A V+P R LS++EF ++ A
Sbjct: 227 VTKASFAQRRKTLLNNLTSQLPGGKQKKEHILSALEQANVEPGRRGETLSIEEFARLSDA 286
>gi|253576891|ref|ZP_04854216.1| dimethyladenosine transferase [Paenibacillus sp. oral taxon 786
str. D14]
gi|251843758|gb|EES71781.1| dimethyladenosine transferase [Paenibacillus sp. oral taxon 786
str. D14]
Length = 298
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 58/124 (46%), Gaps = 6/124 (4%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPII---DL 57
M AT G + LSI Q + + T+P FIP+P V+ V+ T R P + D
Sbjct: 164 MAATPGGKDYGSLSIAVQYYSTPEMICTVPHSVFIPQPNVESAVIRLTVREKPAVAVQDE 223
Query: 58 PFKLIERVVSCIFRYRQKQVYKP-ASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
F VV F R+K + S FPK R+ + LLE A ++P R LS+ EF
Sbjct: 224 AFFF--EVVQASFAQRRKTISNNLKSRFFPKEGRERLEQLLEEAGIQPSRRAETLSLDEF 281
Query: 117 GQIC 120
++
Sbjct: 282 AKLS 285
>gi|254473433|ref|ZP_05086830.1| dimethyladenosine transferase [Pseudovibrio sp. JE062]
gi|211957549|gb|EEA92752.1| dimethyladenosine transferase [Pseudovibrio sp. JE062]
Length = 279
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 60/124 (48%), Gaps = 8/124 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNW-CNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF 59
++A G + RL ++ NW C+ D F + KAF P P+V VV PR P +D P
Sbjct: 160 IVAETGDKAYGRLGVLA-NWRCHTDILFDLNPKAFTPPPKVTSAVVQLHPREKP-LDCPL 217
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
K +ERV + F R+K + L P + + +E A +KP R ++ V F +
Sbjct: 218 KALERVTAHAFGQRRKMLRASLKGLKPNAEAR-----IEAAGLKPTARAEEIDVTGFVAL 272
Query: 120 CLAY 123
A+
Sbjct: 273 AHAF 276
>gi|199597856|ref|ZP_03211282.1| Dimethyladenosine transferase (rRNA methylation) [Lactobacillus
rhamnosus HN001]
gi|258509566|ref|YP_003172317.1| dimethyladenosine transferase [Lactobacillus rhamnosus GG]
gi|385829188|ref|YP_005866960.1| dimethyladenosine transferase [Lactobacillus rhamnosus GG]
gi|199591292|gb|EDY99372.1| Dimethyladenosine transferase (rRNA methylation) [Lactobacillus
rhamnosus HN001]
gi|257149493|emb|CAR88466.1| Dimethyladenosine transferase [Lactobacillus rhamnosus GG]
gi|259650833|dbj|BAI42995.1| dimethyladenosine transferase [Lactobacillus rhamnosus GG]
Length = 294
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 58/123 (47%), Gaps = 1/123 (0%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF-KL 61
A G + LSI Q +V FT+ AF+P P VD +V T R P+ + +
Sbjct: 164 AVPGSKDYGSLSIAVQLVADVATAFTVSRHAFVPAPNVDSAIVTLTQRSEPLATVQSPES 223
Query: 62 IERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQICL 121
+R+V F R+K ++ LF K + + + L A + P R QL++ +F ++
Sbjct: 224 FDRLVRGAFASRRKTLWNNLVALFGKPNKDAIRTALSVAEIAPETRAEQLAIADFARLDE 283
Query: 122 AYR 124
A R
Sbjct: 284 ALR 286
>gi|432395892|ref|ZP_19638685.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE25]
gi|432721646|ref|ZP_19956575.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE17]
gi|432726056|ref|ZP_19960945.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE18]
gi|432739824|ref|ZP_19974547.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE23]
gi|432988990|ref|ZP_20177663.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE217]
gi|433109225|ref|ZP_20295109.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE150]
gi|430918914|gb|ELC39865.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE25]
gi|431268859|gb|ELF60220.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE17]
gi|431277304|gb|ELF68318.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE18]
gi|431287196|gb|ELF78014.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE23]
gi|431499890|gb|ELH78907.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE217]
gi|431633387|gb|ELJ01667.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE150]
Length = 273
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P HP+ D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ RV + F R+K + LF V +L + P +R +SV ++
Sbjct: 208 --RVLSRVTTEAFNQRRKTIRNSLGNLFS-------VEVLTGMGIDPAMRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QMA 261
>gi|170723958|ref|YP_001751646.1| dimethyladenosine transferase [Pseudomonas putida W619]
gi|169761961|gb|ACA75277.1| dimethyladenosine transferase [Pseudomonas putida W619]
Length = 266
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
M A G RLSIM Q C V+H F + AF P P+VD +V P H ++ P K
Sbjct: 145 MAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVP--HEVLPHPAK 202
Query: 61 ---LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
L+ERVV F R+K + L + +E A V LRP QL + F
Sbjct: 203 DHLLLERVVREAFNQRRKTLRNTLKGLLDSQA-------IEAAGVDGSLRPEQLDLAAF 254
>gi|334134055|ref|ZP_08507584.1| dimethyladenosine transferase [Paenibacillus sp. HGF7]
gi|333608402|gb|EGL19700.1| dimethyladenosine transferase [Paenibacillus sp. HGF7]
Length = 306
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 2/127 (1%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
M A G ++ LSI Q +C + +P F+P+P VD V+ R P +++ +
Sbjct: 174 MAAKPGGKEYGSLSIAVQFYCEAELVTIVPRTVFVPQPNVDSAVIRLRLRKGPPVEVADE 233
Query: 61 -LIERVVSCIFRYRQKQVYKP-ASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQ 118
VV F R+K +Y + F K ++ + +LL A ++P R LS++E+G+
Sbjct: 234 DFFFEVVQASFAQRRKTIYNNLGARFFSKENKRDLEALLLEAGIEPSRRGETLSMEEYGR 293
Query: 119 ICLAYRD 125
+ A R+
Sbjct: 294 VAEALRN 300
>gi|153834241|ref|ZP_01986908.1| dimethyladenosine transferase [Vibrio harveyi HY01]
gi|148869429|gb|EDL68435.1| dimethyladenosine transferase [Vibrio harveyi HY01]
Length = 269
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 57/119 (47%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G + RL++M Q +C V +P AF+P P+VD VV P HP D
Sbjct: 147 LAAGPGSKAYGRLTVMAQYYCKVVPVLEVPPTAFVPPPKVDSAVVRLVPYEELPHPAKD- 205
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
F+L+ERV F R+K V L + +LE V P +RP L++Q+F
Sbjct: 206 -FRLLERVCREGFNQRRKTVRNCYKAL-------ISAEVLEELGVNPSMRPENLTLQQF 256
>gi|372270801|ref|ZP_09506849.1| dimethyladenosine transferase [Marinobacterium stanieri S30]
Length = 271
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 59/132 (44%), Gaps = 12/132 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G RL IM Q +C V+ F +P AF P P+VD +V P P I P K
Sbjct: 148 LAAGPGDNHYGRLGIMAQYYCRVEPLFIVPPGAFSPAPKVDSAIVRLVPYAEPPI--PAK 205
Query: 61 LI---ERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+ + VV F R+K + K+ + LE + P LRP +L++ EF
Sbjct: 206 DVGQLQHVVRTAFGQRRKTLRN-------NLKQLISADALEALDIDPGLRPERLTLAEFV 258
Query: 118 QICLAYRDMCEE 129
+I A D +
Sbjct: 259 RISDALTDAANK 270
>gi|256823429|ref|YP_003147392.1| dimethyladenosine transferase [Kangiella koreensis DSM 16069]
gi|256796968|gb|ACV27624.1| dimethyladenosine transferase [Kangiella koreensis DSM 16069]
Length = 269
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 16/123 (13%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF--- 59
A G RLS+M Q +C D F +P AF P P+V+ +V R+ P DLP+
Sbjct: 149 AQPGTSSYGRLSVMTQYYCQADLLFLVPPGAFQPPPKVESAIV----RLQPYCDLPYPVQ 204
Query: 60 --KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+L+ ++V+ F R+K + K+ + + LE+ +KP R QLS+ +F
Sbjct: 205 DEQLLGQIVTAAFGQRRKTLRNSL-------KKFINETGLEQLGIKPTERAEQLSLSQFV 257
Query: 118 QIC 120
IC
Sbjct: 258 DIC 260
>gi|24111497|ref|NP_706007.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Shigella flexneri 2a str. 301]
gi|30061618|ref|NP_835789.1| dimethyladenosine transferase [Shigella flexneri 2a str. 2457T]
gi|384541628|ref|YP_005725689.1| Dimethyladenosine transferase [Shigella flexneri 2002017]
gi|415859905|ref|ZP_11534018.1| dimethyladenosine transferase [Shigella flexneri 2a str. 2457T]
gi|417721011|ref|ZP_12369866.1| dimethyladenosine transferase [Shigella flexneri K-304]
gi|417726393|ref|ZP_12375143.1| dimethyladenosine transferase [Shigella flexneri K-671]
gi|417731598|ref|ZP_12380273.1| dimethyladenosine transferase [Shigella flexneri 2747-71]
gi|417741535|ref|ZP_12390092.1| dimethyladenosine transferase [Shigella flexneri 2930-71]
gi|420339519|ref|ZP_14841057.1| dimethyladenosine transferase [Shigella flexneri K-404]
gi|62900584|sp|Q83MG8.1|RSMA_SHIFL RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|24050250|gb|AAN41714.1| S-adenosylmethionine-6-N,N-adenosyl (rRNA) dimethyltransferase
[Shigella flexneri 2a str. 301]
gi|30039860|gb|AAP15594.1| S-adenosylmethionine-6-N,N-adenosyl (rRNA) dimethyltransferase
[Shigella flexneri 2a str. 2457T]
gi|281599412|gb|ADA72396.1| Dimethyladenosine transferase [Shigella flexneri 2002017]
gi|313646570|gb|EFS11031.1| dimethyladenosine transferase [Shigella flexneri 2a str. 2457T]
gi|332762369|gb|EGJ92636.1| dimethyladenosine transferase [Shigella flexneri 2747-71]
gi|332764894|gb|EGJ95122.1| dimethyladenosine transferase [Shigella flexneri K-671]
gi|332768840|gb|EGJ99019.1| dimethyladenosine transferase [Shigella flexneri 2930-71]
gi|333022380|gb|EGK41618.1| dimethyladenosine transferase [Shigella flexneri K-304]
gi|391275421|gb|EIQ34210.1| dimethyladenosine transferase [Shigella flexneri K-404]
Length = 273
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P HP+ D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDI 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V +L + P +R +SV ++
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VEVLTGMGIDPAMRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QMA 261
>gi|331650945|ref|ZP_08351973.1| dimethyladenosine transferase [Escherichia coli M718]
gi|331051399|gb|EGI23448.1| dimethyladenosine transferase [Escherichia coli M718]
Length = 273
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P HP+ D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V +L + P +R +SV ++
Sbjct: 208 --RVLSRITTKAFNQRRKTIRNSLGNLFS-------VEVLTGMGIDPAMRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QMA 261
>gi|374331073|ref|YP_005081257.1| Dimethyladenosine transferase [Pseudovibrio sp. FO-BEG1]
gi|359343861|gb|AEV37235.1| Dimethyladenosine transferase [Pseudovibrio sp. FO-BEG1]
Length = 279
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 60/124 (48%), Gaps = 8/124 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNW-CNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF 59
++A G + RL ++ NW C+ D F + KAF P P+V VV PR P +D P
Sbjct: 160 IVAQTGDKAYGRLGVLA-NWRCHTDILFDLNPKAFTPPPKVTSAVVQLHPREKP-LDCPL 217
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
K +ERV + F R+K + L P + + +E A +KP R ++ V F +
Sbjct: 218 KALERVTAHAFGQRRKMLRASLKGLKPDAETR-----IEAAGLKPTARAEEIDVAGFVAL 272
Query: 120 CLAY 123
A+
Sbjct: 273 AHAF 276
>gi|386617557|ref|YP_006137137.1| Dimethyladenosine transferase [Escherichia coli NA114]
gi|432420165|ref|ZP_19662726.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE178]
gi|432557072|ref|ZP_19793768.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE49]
gi|432708886|ref|ZP_19943957.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE6]
gi|333968058|gb|AEG34863.1| Dimethyladenosine transferase [Escherichia coli NA114]
gi|430948171|gb|ELC67852.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE178]
gi|431095095|gb|ELE00718.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE49]
gi|431253525|gb|ELF47004.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE6]
Length = 273
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P HP+ D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V +L + P +R +SV ++
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VGVLTGMGIDPAMRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QMA 261
>gi|86516099|gb|ABC97700.1| KsgA [Shigella flexneri]
Length = 256
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P HP+ D+
Sbjct: 135 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDI 194
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V +L + P +R +SV ++
Sbjct: 195 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VEVLTGMGIDPAMRAENISVAQYC 245
Query: 118 QIC 120
Q+
Sbjct: 246 QMA 248
>gi|335043105|ref|ZP_08536132.1| dimethyladenosine transferase [Methylophaga aminisulfidivorans MP]
gi|333789719|gb|EGL55601.1| dimethyladenosine transferase [Methylophaga aminisulfidivorans MP]
Length = 266
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 63/122 (51%), Gaps = 8/122 (6%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPI-IDLPFKL 61
A G +Q RLSIM Q+ C D F +P +AF P P+V+ +++ PR + D+
Sbjct: 147 AQPGTKQYGRLSIMIQHQCETDMLFVVPPEAFEPAPKVESAIIYLQPRKQRLGGDVDMAT 206
Query: 62 IERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQICL 121
+ +V+ F R+K + A+ L K+ + + + + A + P RP ++V+ F ++
Sbjct: 207 LSHIVTQAFSQRRKTI---ANTL----KKLISIDMFQAADIDPTQRPETITVEAFVRLTR 259
Query: 122 AY 123
Y
Sbjct: 260 CY 261
>gi|167031448|ref|YP_001666679.1| dimethyladenosine transferase [Pseudomonas putida GB-1]
gi|166857936|gb|ABY96343.1| dimethyladenosine transferase [Pseudomonas putida GB-1]
Length = 266
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
M A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 145 MAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPHEVLPHPAKDA 204
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
KL+E+VV F R+K + L L + +E A V LRP QL + F
Sbjct: 205 --KLLEQVVREAFNQRRKTLRNTMKGL-------LDSAAIEAAGVDGSLRPEQLDLAAF 254
>gi|51594984|ref|YP_069175.1| dimethyladenosine transferase [Yersinia pseudotuberculosis IP
32953]
gi|153948384|ref|YP_001402399.1| dimethyladenosine transferase [Yersinia pseudotuberculosis IP
31758]
gi|170025788|ref|YP_001722293.1| dimethyladenosine transferase [Yersinia pseudotuberculosis YPIII]
gi|186893985|ref|YP_001871097.1| dimethyladenosine transferase [Yersinia pseudotuberculosis PB1/+]
gi|62900509|sp|Q66EQ8.1|RSMA_YERPS RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|166987698|sp|A7FMC1.1|RSMA_YERP3 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226732643|sp|B2K487.1|RSMA_YERPB RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226732645|sp|B1JKY3.1|RSMA_YERPY RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|51588266|emb|CAH19873.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase;
kasugamycin resistance [Yersinia pseudotuberculosis IP
32953]
gi|152959879|gb|ABS47340.1| dimethyladenosine transferase [Yersinia pseudotuberculosis IP
31758]
gi|169752322|gb|ACA69840.1| dimethyladenosine transferase [Yersinia pseudotuberculosis YPIII]
gi|186697011|gb|ACC87640.1| dimethyladenosine transferase [Yersinia pseudotuberculosis PB1/+]
Length = 272
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RL++M Q +CNV +P AF P P+VD VV P V HP+ D+
Sbjct: 148 LVAGPNSKAYGRLTVMAQYYCNVIPVLEVPPTAFTPAPKVDSAVVRLIPHVQMPHPVGDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+++ R+ + F R+K V LF + L+E + PILR +SV ++
Sbjct: 208 --RMLSRITTQAFNQRRKTVRNSLGDLFTSEQ------LIELG-IDPILRAENISVAQY 257
>gi|218703312|ref|YP_002410831.1| dimethyladenosine transferase [Escherichia coli UMN026]
gi|298378654|ref|ZP_06988538.1| dimethyladenosine transferase [Escherichia coli FVEC1302]
gi|226732578|sp|B7N7S6.1|RSMA_ECOLU RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|218430409|emb|CAR11276.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Escherichia coli UMN026]
gi|298280988|gb|EFI22489.1| dimethyladenosine transferase [Escherichia coli FVEC1302]
Length = 273
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 14/134 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P HP+ D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V +L + P +R +SV ++
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VEVLTGMGIDPAMRAENISVAQYC 258
Query: 118 QIC--LAYRDMCEE 129
Q+ LA + +E
Sbjct: 259 QMANYLAENALLQE 272
>gi|333894397|ref|YP_004468272.1| dimethyladenosine transferase [Alteromonas sp. SN2]
gi|332994415|gb|AEF04470.1| dimethyladenosine transferase [Alteromonas sp. SN2]
Length = 275
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 57/129 (44%), Gaps = 8/129 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIID-LPF 59
+ A G + RLS+M Q +C V +P AF P P+VD VV P P +D +
Sbjct: 150 LAAGHGSKSYGRLSVMAQYYCKVMPVLNVPPGAFKPPPKVDSAVVRLIPHKTPPVDVVSV 209
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
+ERV + F R+K + K L + + + P +R LS+Q+F I
Sbjct: 210 ATLERVCAQAFNQRRKTIRN-------SLKESLTETQISELGINPTVRAEVLSLQDFATI 262
Query: 120 CLAYRDMCE 128
A + E
Sbjct: 263 ANAVSALEE 271
>gi|22127557|ref|NP_670980.1| dimethyladenosine transferase [Yersinia pestis KIM10+]
gi|45443419|ref|NP_994958.1| dimethyladenosine transferase [Yersinia pestis biovar Microtus str.
91001]
gi|108810076|ref|YP_653992.1| dimethyladenosine transferase [Yersinia pestis Antiqua]
gi|108810531|ref|YP_646298.1| dimethyladenosine transferase [Yersinia pestis Nepal516]
gi|145600397|ref|YP_001164473.1| dimethyladenosine transferase [Yersinia pestis Pestoides F]
gi|150260471|ref|ZP_01917199.1| dimethyladenosine transferase [Yersinia pestis CA88-4125]
gi|162421183|ref|YP_001605347.1| dimethyladenosine transferase [Yersinia pestis Angola]
gi|165928081|ref|ZP_02223913.1| dimethyladenosine transferase [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165937777|ref|ZP_02226338.1| dimethyladenosine transferase [Yersinia pestis biovar Orientalis
str. IP275]
gi|166008750|ref|ZP_02229648.1| dimethyladenosine transferase [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166212108|ref|ZP_02238143.1| dimethyladenosine transferase [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167401583|ref|ZP_02307077.1| dimethyladenosine transferase [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167422020|ref|ZP_02313773.1| dimethyladenosine transferase [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167426031|ref|ZP_02317784.1| dimethyladenosine transferase [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|218927690|ref|YP_002345565.1| dimethyladenosine transferase [Yersinia pestis CO92]
gi|229836925|ref|ZP_04457090.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Yersinia pestis Pestoides A]
gi|229840380|ref|ZP_04460539.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Yersinia pestis biovar Orientalis str. PEXU2]
gi|229842460|ref|ZP_04462615.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Yersinia pestis biovar Orientalis str. India 195]
gi|229900719|ref|ZP_04515843.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Yersinia pestis Nepal516]
gi|270487910|ref|ZP_06204984.1| dimethyladenosine transferase [Yersinia pestis KIM D27]
gi|294502587|ref|YP_003566649.1| dimethyladenosine transferase [Yersinia pestis Z176003]
gi|384121021|ref|YP_005503641.1| dimethyladenosine transferase [Yersinia pestis D106004]
gi|384124899|ref|YP_005507513.1| dimethyladenosine transferase [Yersinia pestis D182038]
gi|384137520|ref|YP_005520222.1| KsgA/Dim1 family 16S ribosomal RNA methyltransferase [Yersinia
pestis A1122]
gi|384416359|ref|YP_005625721.1| dimethyladenosine transferase [Yersinia pestis biovar Medievalis
str. Harbin 35]
gi|420544965|ref|ZP_15043144.1| dimethyladenosine transferase [Yersinia pestis PY-01]
gi|420550281|ref|ZP_15047897.1| dimethyladenosine transferase [Yersinia pestis PY-02]
gi|420555730|ref|ZP_15052745.1| dimethyladenosine transferase [Yersinia pestis PY-03]
gi|420561408|ref|ZP_15057693.1| dimethyladenosine transferase [Yersinia pestis PY-04]
gi|420566419|ref|ZP_15062212.1| dimethyladenosine transferase [Yersinia pestis PY-05]
gi|420572075|ref|ZP_15067354.1| dimethyladenosine transferase [Yersinia pestis PY-06]
gi|420577372|ref|ZP_15072136.1| dimethyladenosine transferase [Yersinia pestis PY-07]
gi|420582763|ref|ZP_15077051.1| dimethyladenosine transferase [Yersinia pestis PY-08]
gi|420587863|ref|ZP_15081654.1| dimethyladenosine transferase [Yersinia pestis PY-09]
gi|420593177|ref|ZP_15086435.1| dimethyladenosine transferase [Yersinia pestis PY-10]
gi|420598873|ref|ZP_15091539.1| dimethyladenosine transferase [Yersinia pestis PY-11]
gi|420604442|ref|ZP_15096505.1| dimethyladenosine transferase [Yersinia pestis PY-12]
gi|420609719|ref|ZP_15101298.1| dimethyladenosine transferase [Yersinia pestis PY-13]
gi|420614986|ref|ZP_15105986.1| dimethyladenosine transferase [Yersinia pestis PY-14]
gi|420620450|ref|ZP_15110751.1| dimethyladenosine transferase [Yersinia pestis PY-15]
gi|420625482|ref|ZP_15115316.1| dimethyladenosine transferase [Yersinia pestis PY-16]
gi|420630637|ref|ZP_15119995.1| dimethyladenosine transferase [Yersinia pestis PY-19]
gi|420635817|ref|ZP_15124625.1| dimethyladenosine transferase [Yersinia pestis PY-25]
gi|420641430|ref|ZP_15129689.1| dimethyladenosine transferase [Yersinia pestis PY-29]
gi|420646488|ref|ZP_15134325.1| dimethyladenosine transferase [Yersinia pestis PY-32]
gi|420652175|ref|ZP_15139425.1| dimethyladenosine transferase [Yersinia pestis PY-34]
gi|420657626|ref|ZP_15144343.1| dimethyladenosine transferase [Yersinia pestis PY-36]
gi|420662966|ref|ZP_15149107.1| dimethyladenosine transferase [Yersinia pestis PY-42]
gi|420667984|ref|ZP_15153648.1| dimethyladenosine transferase [Yersinia pestis PY-45]
gi|420673250|ref|ZP_15158438.1| dimethyladenosine transferase [Yersinia pestis PY-46]
gi|420678752|ref|ZP_15163445.1| dimethyladenosine transferase [Yersinia pestis PY-47]
gi|420683990|ref|ZP_15168150.1| dimethyladenosine transferase [Yersinia pestis PY-48]
gi|420689155|ref|ZP_15172737.1| dimethyladenosine transferase [Yersinia pestis PY-52]
gi|420694977|ref|ZP_15177827.1| dimethyladenosine transferase [Yersinia pestis PY-53]
gi|420700252|ref|ZP_15182427.1| dimethyladenosine transferase [Yersinia pestis PY-54]
gi|420706409|ref|ZP_15187322.1| dimethyladenosine transferase [Yersinia pestis PY-55]
gi|420711682|ref|ZP_15192103.1| dimethyladenosine transferase [Yersinia pestis PY-56]
gi|420717054|ref|ZP_15196857.1| dimethyladenosine transferase [Yersinia pestis PY-58]
gi|420722697|ref|ZP_15201666.1| dimethyladenosine transferase [Yersinia pestis PY-59]
gi|420728334|ref|ZP_15206681.1| dimethyladenosine transferase [Yersinia pestis PY-60]
gi|420733450|ref|ZP_15211289.1| dimethyladenosine transferase [Yersinia pestis PY-61]
gi|420738892|ref|ZP_15216202.1| dimethyladenosine transferase [Yersinia pestis PY-63]
gi|420744108|ref|ZP_15220859.1| dimethyladenosine transferase [Yersinia pestis PY-64]
gi|420750041|ref|ZP_15225862.1| dimethyladenosine transferase [Yersinia pestis PY-65]
gi|420755106|ref|ZP_15230372.1| dimethyladenosine transferase [Yersinia pestis PY-66]
gi|420761205|ref|ZP_15235241.1| dimethyladenosine transferase [Yersinia pestis PY-71]
gi|420766353|ref|ZP_15239899.1| dimethyladenosine transferase [Yersinia pestis PY-72]
gi|420771395|ref|ZP_15244411.1| dimethyladenosine transferase [Yersinia pestis PY-76]
gi|420776718|ref|ZP_15249214.1| dimethyladenosine transferase [Yersinia pestis PY-88]
gi|420782209|ref|ZP_15254027.1| dimethyladenosine transferase [Yersinia pestis PY-89]
gi|420787643|ref|ZP_15258793.1| dimethyladenosine transferase [Yersinia pestis PY-90]
gi|420793105|ref|ZP_15263717.1| dimethyladenosine transferase [Yersinia pestis PY-91]
gi|420798258|ref|ZP_15268344.1| dimethyladenosine transferase [Yersinia pestis PY-92]
gi|420803643|ref|ZP_15273191.1| dimethyladenosine transferase [Yersinia pestis PY-93]
gi|420808815|ref|ZP_15277876.1| dimethyladenosine transferase [Yersinia pestis PY-94]
gi|420814612|ref|ZP_15283063.1| dimethyladenosine transferase [Yersinia pestis PY-95]
gi|420819760|ref|ZP_15287733.1| dimethyladenosine transferase [Yersinia pestis PY-96]
gi|420824837|ref|ZP_15292273.1| dimethyladenosine transferase [Yersinia pestis PY-98]
gi|420830631|ref|ZP_15297506.1| dimethyladenosine transferase [Yersinia pestis PY-99]
gi|420835435|ref|ZP_15301832.1| dimethyladenosine transferase [Yersinia pestis PY-100]
gi|420840600|ref|ZP_15306516.1| dimethyladenosine transferase [Yersinia pestis PY-101]
gi|420846188|ref|ZP_15311571.1| dimethyladenosine transferase [Yersinia pestis PY-102]
gi|420851518|ref|ZP_15316324.1| dimethyladenosine transferase [Yersinia pestis PY-103]
gi|420857105|ref|ZP_15321031.1| dimethyladenosine transferase [Yersinia pestis PY-113]
gi|421761923|ref|ZP_16198723.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Yersinia pestis INS]
gi|27151586|sp|Q8ZIK5.1|RSMA_YERPE RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|118600905|sp|Q1C0H5.1|RSMA_YERPA RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|118600906|sp|Q1CMT2.1|RSMA_YERPN RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|166221716|sp|A4TQD8.1|RSMA_YERPP RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226732644|sp|A9QZZ0.1|RSMA_YERPG RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|21960661|gb|AAM87231.1|AE013971_7 S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Yersinia pestis KIM10+]
gi|45438288|gb|AAS63835.1| dimethyladenosine transferase [Yersinia pestis biovar Microtus str.
91001]
gi|108774179|gb|ABG16698.1| dimethyladenosine transferase [Yersinia pestis Nepal516]
gi|108781989|gb|ABG16047.1| dimethyladenosine transferase [Yersinia pestis Antiqua]
gi|115346301|emb|CAL19172.1| dimethyladenosine transferase [Yersinia pestis CO92]
gi|145212093|gb|ABP41500.1| dimethyladenosine transferase [Yersinia pestis Pestoides F]
gi|149289879|gb|EDM39956.1| dimethyladenosine transferase [Yersinia pestis CA88-4125]
gi|162353998|gb|ABX87946.1| dimethyladenosine transferase [Yersinia pestis Angola]
gi|165914189|gb|EDR32805.1| dimethyladenosine transferase [Yersinia pestis biovar Orientalis
str. IP275]
gi|165919942|gb|EDR37243.1| dimethyladenosine transferase [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165992089|gb|EDR44390.1| dimethyladenosine transferase [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166206854|gb|EDR51334.1| dimethyladenosine transferase [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166960157|gb|EDR56178.1| dimethyladenosine transferase [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167048965|gb|EDR60373.1| dimethyladenosine transferase [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167054954|gb|EDR64754.1| dimethyladenosine transferase [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|229682058|gb|EEO78150.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Yersinia pestis Nepal516]
gi|229690770|gb|EEO82824.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Yersinia pestis biovar Orientalis str. India 195]
gi|229696746|gb|EEO86793.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Yersinia pestis biovar Orientalis str. PEXU2]
gi|229705868|gb|EEO91877.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Yersinia pestis Pestoides A]
gi|262360617|gb|ACY57338.1| dimethyladenosine transferase [Yersinia pestis D106004]
gi|262364563|gb|ACY61120.1| dimethyladenosine transferase [Yersinia pestis D182038]
gi|270336414|gb|EFA47191.1| dimethyladenosine transferase [Yersinia pestis KIM D27]
gi|294353046|gb|ADE63387.1| dimethyladenosine transferase [Yersinia pestis Z176003]
gi|320016863|gb|ADW00435.1| dimethyladenosine transferase [Yersinia pestis biovar Medievalis
str. Harbin 35]
gi|342852649|gb|AEL71202.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Yersinia pestis A1122]
gi|391432223|gb|EIQ93687.1| dimethyladenosine transferase [Yersinia pestis PY-01]
gi|391433366|gb|EIQ94706.1| dimethyladenosine transferase [Yersinia pestis PY-02]
gi|391435836|gb|EIQ96848.1| dimethyladenosine transferase [Yersinia pestis PY-03]
gi|391448301|gb|EIR08125.1| dimethyladenosine transferase [Yersinia pestis PY-04]
gi|391448953|gb|EIR08714.1| dimethyladenosine transferase [Yersinia pestis PY-05]
gi|391451570|gb|EIR11048.1| dimethyladenosine transferase [Yersinia pestis PY-06]
gi|391464332|gb|EIR22628.1| dimethyladenosine transferase [Yersinia pestis PY-07]
gi|391465976|gb|EIR24098.1| dimethyladenosine transferase [Yersinia pestis PY-08]
gi|391468087|gb|EIR25992.1| dimethyladenosine transferase [Yersinia pestis PY-09]
gi|391481347|gb|EIR37890.1| dimethyladenosine transferase [Yersinia pestis PY-10]
gi|391482214|gb|EIR38675.1| dimethyladenosine transferase [Yersinia pestis PY-12]
gi|391482337|gb|EIR38787.1| dimethyladenosine transferase [Yersinia pestis PY-11]
gi|391496541|gb|EIR51470.1| dimethyladenosine transferase [Yersinia pestis PY-13]
gi|391497185|gb|EIR52064.1| dimethyladenosine transferase [Yersinia pestis PY-15]
gi|391500888|gb|EIR55345.1| dimethyladenosine transferase [Yersinia pestis PY-14]
gi|391512253|gb|EIR65579.1| dimethyladenosine transferase [Yersinia pestis PY-16]
gi|391513909|gb|EIR67070.1| dimethyladenosine transferase [Yersinia pestis PY-19]
gi|391515836|gb|EIR68784.1| dimethyladenosine transferase [Yersinia pestis PY-25]
gi|391527777|gb|EIR79659.1| dimethyladenosine transferase [Yersinia pestis PY-29]
gi|391530591|gb|EIR82155.1| dimethyladenosine transferase [Yersinia pestis PY-34]
gi|391532004|gb|EIR83444.1| dimethyladenosine transferase [Yersinia pestis PY-32]
gi|391544854|gb|EIR95014.1| dimethyladenosine transferase [Yersinia pestis PY-36]
gi|391546433|gb|EIR96419.1| dimethyladenosine transferase [Yersinia pestis PY-42]
gi|391547236|gb|EIR97144.1| dimethyladenosine transferase [Yersinia pestis PY-45]
gi|391561062|gb|EIS09625.1| dimethyladenosine transferase [Yersinia pestis PY-46]
gi|391562153|gb|EIS10588.1| dimethyladenosine transferase [Yersinia pestis PY-47]
gi|391564240|gb|EIS12465.1| dimethyladenosine transferase [Yersinia pestis PY-48]
gi|391576376|gb|EIS22941.1| dimethyladenosine transferase [Yersinia pestis PY-52]
gi|391577138|gb|EIS23602.1| dimethyladenosine transferase [Yersinia pestis PY-53]
gi|391588521|gb|EIS33535.1| dimethyladenosine transferase [Yersinia pestis PY-55]
gi|391591318|gb|EIS35905.1| dimethyladenosine transferase [Yersinia pestis PY-54]
gi|391592365|gb|EIS36795.1| dimethyladenosine transferase [Yersinia pestis PY-56]
gi|391605509|gb|EIS48378.1| dimethyladenosine transferase [Yersinia pestis PY-60]
gi|391606988|gb|EIS49639.1| dimethyladenosine transferase [Yersinia pestis PY-58]
gi|391607778|gb|EIS50335.1| dimethyladenosine transferase [Yersinia pestis PY-59]
gi|391619834|gb|EIS61051.1| dimethyladenosine transferase [Yersinia pestis PY-61]
gi|391620817|gb|EIS61934.1| dimethyladenosine transferase [Yersinia pestis PY-63]
gi|391629126|gb|EIS69096.1| dimethyladenosine transferase [Yersinia pestis PY-64]
gi|391631355|gb|EIS70996.1| dimethyladenosine transferase [Yersinia pestis PY-65]
gi|391642680|gb|EIS80926.1| dimethyladenosine transferase [Yersinia pestis PY-71]
gi|391645468|gb|EIS83343.1| dimethyladenosine transferase [Yersinia pestis PY-72]
gi|391648061|gb|EIS85624.1| dimethyladenosine transferase [Yersinia pestis PY-66]
gi|391655139|gb|EIS91907.1| dimethyladenosine transferase [Yersinia pestis PY-76]
gi|391662036|gb|EIS98017.1| dimethyladenosine transferase [Yersinia pestis PY-88]
gi|391666819|gb|EIT02216.1| dimethyladenosine transferase [Yersinia pestis PY-89]
gi|391668677|gb|EIT03887.1| dimethyladenosine transferase [Yersinia pestis PY-90]
gi|391672720|gb|EIT07502.1| dimethyladenosine transferase [Yersinia pestis PY-91]
gi|391686250|gb|EIT19693.1| dimethyladenosine transferase [Yersinia pestis PY-93]
gi|391687883|gb|EIT21154.1| dimethyladenosine transferase [Yersinia pestis PY-92]
gi|391689118|gb|EIT22278.1| dimethyladenosine transferase [Yersinia pestis PY-94]
gi|391700374|gb|EIT32472.1| dimethyladenosine transferase [Yersinia pestis PY-95]
gi|391703654|gb|EIT35382.1| dimethyladenosine transferase [Yersinia pestis PY-96]
gi|391704491|gb|EIT36144.1| dimethyladenosine transferase [Yersinia pestis PY-98]
gi|391714968|gb|EIT45552.1| dimethyladenosine transferase [Yersinia pestis PY-99]
gi|391720022|gb|EIT50072.1| dimethyladenosine transferase [Yersinia pestis PY-100]
gi|391720520|gb|EIT50527.1| dimethyladenosine transferase [Yersinia pestis PY-101]
gi|391731206|gb|EIT59935.1| dimethyladenosine transferase [Yersinia pestis PY-102]
gi|391733668|gb|EIT62014.1| dimethyladenosine transferase [Yersinia pestis PY-103]
gi|391737205|gb|EIT65111.1| dimethyladenosine transferase [Yersinia pestis PY-113]
gi|411178245|gb|EKS48257.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Yersinia pestis INS]
Length = 272
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RL++M Q +CNV +P AF P P+VD VV P V HP+ D+
Sbjct: 148 LVAGPNSKTYGRLTVMAQYYCNVIPVLEVPPTAFTPAPKVDSAVVRLIPHVQMPHPVGDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+++ R+ + F R+K V LF + L+E + PILR +SV ++
Sbjct: 208 --RMLSRITTQAFNQRRKTVRNSLGDLFTSEQ------LIELG-IDPILRAENISVAQY 257
>gi|416285020|ref|ZP_11647560.1| Dimethyladenosine transferase [Shigella boydii ATCC 9905]
gi|417637309|ref|ZP_12287493.1| dimethyladenosine transferase [Escherichia coli TX1999]
gi|417705542|ref|ZP_12354617.1| dimethyladenosine transferase [Shigella flexneri VA-6]
gi|418959499|ref|ZP_13511397.1| dimethyladenosine transferase [Escherichia coli J53]
gi|320179612|gb|EFW54561.1| Dimethyladenosine transferase [Shigella boydii ATCC 9905]
gi|333010543|gb|EGK29976.1| dimethyladenosine transferase [Shigella flexneri VA-6]
gi|345395823|gb|EGX25558.1| dimethyladenosine transferase [Escherichia coli TX1999]
gi|384377720|gb|EIE35613.1| dimethyladenosine transferase [Escherichia coli J53]
Length = 249
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P HP+ D+
Sbjct: 124 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDV 183
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V +L + P +R +SV ++
Sbjct: 184 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VEVLTGMGIDPAMRAENISVAQYC 234
Query: 118 QIC 120
Q+
Sbjct: 235 QMA 237
>gi|395236399|ref|ZP_10414594.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Enterobacter sp. Ag1]
gi|394728826|gb|EJF28861.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Enterobacter sp. Ag1]
Length = 274
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 57/123 (46%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P HP+ DL
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPTAFTPAPKVDSAVVRLVPHATLPHPVKDL 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF LL V LR +SV+++
Sbjct: 208 --RVLSRITTEAFNKRRKTIRNSLGHLFS-------ADLLAELGVDATLRAENISVEQYC 258
Query: 118 QIC 120
++
Sbjct: 259 KLA 261
>gi|297516941|ref|ZP_06935327.1| dimethyladenosine transferase [Escherichia coli OP50]
Length = 273
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P HP+ D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V +L + P +R +SV ++
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VEVLTGMGIDPAMRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QMA 261
>gi|226309677|ref|YP_002769571.1| dimethyladenosine transferase [Brevibacillus brevis NBRC 100599]
gi|226092625|dbj|BAH41067.1| dimethyladenosine transferase [Brevibacillus brevis NBRC 100599]
Length = 297
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-L 61
A G + LS+ Q + + + +P FIP+P VD V+ R P +++ + +
Sbjct: 168 AKPGTKDYGSLSVAAQFYADTEVAMIVPASVFIPRPNVDSAVIRLKVRDRPPVEVDDQDV 227
Query: 62 IERVVSCIFRYRQKQVYKP-ASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
RVV C F R+K + + LFPK ++ V+ +L + P R LS+ EF ++
Sbjct: 228 FFRVVRCSFAQRRKTLLNNLMNGLFPKTQKDEVIQMLTDIGIDPTRRGETLSLDEFARLA 287
>gi|304405864|ref|ZP_07387522.1| dimethyladenosine transferase [Paenibacillus curdlanolyticus YK9]
gi|304345107|gb|EFM10943.1| dimethyladenosine transferase [Paenibacillus curdlanolyticus YK9]
Length = 303
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 1/126 (0%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
M A G ++ LS+ Q +C T+P FIP+P VD V+ + R P ++ +
Sbjct: 172 MAAKPGGKEYGSLSVAVQYYCEPSIVCTVPHTVFIPQPNVDSAVIKLSLREKPAVETRDE 231
Query: 61 L-IERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
R V F R+K + S K R+ + S++E ++P R LS++EF ++
Sbjct: 232 AHFFRTVQASFAQRRKTLMNNMSSWIGKDHRETLTSIMEGCGIQPSRRGETLSLEEFAKL 291
Query: 120 CLAYRD 125
A D
Sbjct: 292 SAALYD 297
>gi|425107386|ref|ZP_18509671.1| dimethyladenosine transferase [Escherichia coli 6.0172]
gi|425147790|ref|ZP_18547727.1| dimethyladenosine transferase [Escherichia coli 88.0221]
gi|429023766|ref|ZP_19090217.1| dimethyladenosine transferase [Escherichia coli 96.0427]
gi|444999267|ref|ZP_21315749.1| dimethyladenosine transferase [Escherichia coli PA13]
gi|445032192|ref|ZP_21347830.1| dimethyladenosine transferase [Escherichia coli 99.1762]
gi|445043060|ref|ZP_21358409.1| dimethyladenosine transferase [Escherichia coli 3.4880]
gi|408561469|gb|EKK37672.1| dimethyladenosine transferase [Escherichia coli 6.0172]
gi|408614161|gb|EKK87444.1| dimethyladenosine transferase [Escherichia coli 88.0221]
gi|427293310|gb|EKW56564.1| dimethyladenosine transferase [Escherichia coli 96.0427]
gi|444602106|gb|ELV76861.1| dimethyladenosine transferase [Escherichia coli PA13]
gi|444655254|gb|ELW27873.1| dimethyladenosine transferase [Escherichia coli 99.1762]
gi|444668716|gb|ELW40716.1| dimethyladenosine transferase [Escherichia coli 3.4880]
Length = 249
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P HP+ D+
Sbjct: 124 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDV 183
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V +L + P +R +SV ++
Sbjct: 184 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VEVLTGMGIDPAMRAENISVAQYC 234
Query: 118 QIC 120
Q+
Sbjct: 235 QMA 237
>gi|388454984|ref|ZP_10137279.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Fluoribacter dumoffii Tex-KL]
Length = 256
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 59/121 (48%), Gaps = 8/121 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPF 59
M A G + RL++M Q C V++ F +P +AF P+P+VD VV TP R+ P +
Sbjct: 138 MAAQPGSKAYGRLTVMLQYHCVVEYLFDVPPEAFDPQPKVDSAVVRLTPHRISPFEKVSA 197
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
+ER+V+ F R+K L K + L + RP Q+S+ E+ Q+
Sbjct: 198 GQLERLVASAFAMRRKT-------LNNNLKGIITAEQLSALGIDGNKRPEQISIAEYVQL 250
Query: 120 C 120
Sbjct: 251 A 251
>gi|86516027|gb|ABC97664.1| KsgA [Shigella boydii]
gi|86516033|gb|ABC97667.1| KsgA [Shigella boydii]
gi|86516035|gb|ABC97668.1| KsgA [Shigella boydii]
gi|86516037|gb|ABC97669.1| KsgA [Shigella boydii]
gi|86516039|gb|ABC97670.1| KsgA [Shigella boydii]
gi|86516043|gb|ABC97672.1| KsgA [Shigella boydii]
gi|86516047|gb|ABC97674.1| KsgA [Shigella boydii]
gi|86516051|gb|ABC97676.1| KsgA [Shigella boydii]
gi|86516055|gb|ABC97678.1| KsgA [Shigella boydii]
gi|86516057|gb|ABC97679.1| KsgA [Shigella dysenteriae]
gi|86516059|gb|ABC97680.1| KsgA [Shigella dysenteriae]
gi|86516061|gb|ABC97681.1| KsgA [Shigella dysenteriae]
gi|86516063|gb|ABC97682.1| KsgA [Shigella dysenteriae]
gi|86516065|gb|ABC97683.1| KsgA [Shigella dysenteriae]
gi|86516067|gb|ABC97684.1| KsgA [Shigella dysenteriae]
gi|86516069|gb|ABC97685.1| KsgA [Shigella dysenteriae]
gi|86516073|gb|ABC97687.1| KsgA [Shigella dysenteriae]
gi|86516075|gb|ABC97688.1| KsgA [Shigella dysenteriae]
gi|86516077|gb|ABC97689.1| KsgA [Shigella dysenteriae]
gi|86516079|gb|ABC97690.1| KsgA [Shigella dysenteriae]
gi|86516081|gb|ABC97691.1| KsgA [Shigella flexneri]
gi|86516083|gb|ABC97692.1| KsgA [Shigella flexneri]
gi|86516085|gb|ABC97693.1| KsgA [Shigella flexneri]
gi|86516087|gb|ABC97694.1| KsgA [Shigella flexneri]
gi|86516093|gb|ABC97697.1| KsgA [Shigella flexneri]
gi|86516097|gb|ABC97699.1| KsgA [Shigella flexneri]
gi|86516101|gb|ABC97701.1| KsgA [Escherichia coli]
gi|86516103|gb|ABC97702.1| KsgA [Escherichia coli]
gi|86516105|gb|ABC97703.1| KsgA [Escherichia coli]
Length = 256
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P HP+ D+
Sbjct: 135 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDV 194
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V +L + P +R +SV ++
Sbjct: 195 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VEVLTGMGIDPAMRAENISVAQYC 245
Query: 118 QIC 120
Q+
Sbjct: 246 QMA 248
>gi|312970146|ref|ZP_07784328.1| dimethyladenosine transferase [Escherichia coli 1827-70]
gi|310337644|gb|EFQ02755.1| dimethyladenosine transferase [Escherichia coli 1827-70]
Length = 273
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P HP+ D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V +L + P +R +SV ++
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VEVLTGMGIDPAMRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QMA 261
>gi|425286563|ref|ZP_18677517.1| dimethyladenosine transferase [Escherichia coli 3006]
gi|408219674|gb|EKI43792.1| dimethyladenosine transferase [Escherichia coli 3006]
Length = 273
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P HP+ D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V +L + P +R +SV ++
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VEVLAGMGIDPAMRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QMA 261
>gi|209917243|ref|YP_002291327.1| dimethyladenosine transferase [Escherichia coli SE11]
gi|226732579|sp|B6HZ32.1|RSMA_ECOSE RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|209910502|dbj|BAG75576.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Escherichia coli SE11]
Length = 273
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P HP+ D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V +L + P +R +SV ++
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VEVLTGMGIDPAMRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QMA 261
>gi|157156598|ref|YP_001461223.1| dimethyladenosine transferase [Escherichia coli E24377A]
gi|293403126|ref|ZP_06647223.1| dimethyladenosine transferase [Escherichia coli FVEC1412]
gi|300900925|ref|ZP_07119060.1| dimethyladenosine transferase [Escherichia coli MS 198-1]
gi|301019759|ref|ZP_07183905.1| dimethyladenosine transferase [Escherichia coli MS 69-1]
gi|331681437|ref|ZP_08382074.1| dimethyladenosine transferase [Escherichia coli H299]
gi|417584864|ref|ZP_12235648.1| dimethyladenosine transferase [Escherichia coli STEC_C165-02]
gi|419919060|ref|ZP_14437228.1| dimethyladenosine transferase [Escherichia coli KD2]
gi|419935342|ref|ZP_14452425.1| dimethyladenosine transferase [Escherichia coli 576-1]
gi|432351689|ref|ZP_19595002.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE2]
gi|432400135|ref|ZP_19642896.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE26]
gi|432429165|ref|ZP_19671632.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE181]
gi|432463907|ref|ZP_19706028.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE204]
gi|432474052|ref|ZP_19716069.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE208]
gi|432520704|ref|ZP_19757875.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE228]
gi|432540877|ref|ZP_19777758.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE235]
gi|432614852|ref|ZP_19850989.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE75]
gi|432634500|ref|ZP_19870408.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE80]
gi|432644092|ref|ZP_19879906.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE83]
gi|432664211|ref|ZP_19899814.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE116]
gi|432768862|ref|ZP_20003242.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE50]
gi|432773207|ref|ZP_20007509.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE54]
gi|432818275|ref|ZP_20052002.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE115]
gi|432883635|ref|ZP_20098948.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE158]
gi|432909555|ref|ZP_20116887.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE190]
gi|432958784|ref|ZP_20149642.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE202]
gi|433017028|ref|ZP_20205305.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE105]
gi|433051269|ref|ZP_20238519.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE122]
gi|433061263|ref|ZP_20248237.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE125]
gi|433066175|ref|ZP_20253031.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE128]
gi|433156992|ref|ZP_20341876.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE177]
gi|433176416|ref|ZP_20360896.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE82]
gi|450184928|ref|ZP_21888838.1| dimethyladenosine transferase [Escherichia coli SEPT362]
gi|166987692|sp|A7ZHE4.1|RSMA_ECO24 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|157078628|gb|ABV18336.1| dimethyladenosine transferase [Escherichia coli E24377A]
gi|291430041|gb|EFF03055.1| dimethyladenosine transferase [Escherichia coli FVEC1412]
gi|300355588|gb|EFJ71458.1| dimethyladenosine transferase [Escherichia coli MS 198-1]
gi|300399096|gb|EFJ82634.1| dimethyladenosine transferase [Escherichia coli MS 69-1]
gi|331081658|gb|EGI52819.1| dimethyladenosine transferase [Escherichia coli H299]
gi|345343047|gb|EGW75439.1| dimethyladenosine transferase [Escherichia coli STEC_C165-02]
gi|388388723|gb|EIL50281.1| dimethyladenosine transferase [Escherichia coli KD2]
gi|388404708|gb|EIL65157.1| dimethyladenosine transferase [Escherichia coli 576-1]
gi|430881268|gb|ELC04522.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE2]
gi|430930250|gb|ELC50751.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE26]
gi|430948912|gb|ELC68496.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE181]
gi|430983594|gb|ELD00251.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE204]
gi|431011743|gb|ELD25817.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE208]
gi|431046087|gb|ELD56206.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE228]
gi|431065379|gb|ELD74151.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE235]
gi|431158561|gb|ELE59159.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE75]
gi|431165602|gb|ELE65940.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE80]
gi|431175973|gb|ELE75959.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE83]
gi|431205489|gb|ELF03976.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE116]
gi|431320255|gb|ELG07898.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE50]
gi|431321717|gb|ELG09317.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE54]
gi|431359264|gb|ELG45909.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE115]
gi|431421012|gb|ELH03230.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE158]
gi|431449309|gb|ELH29884.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE190]
gi|431483279|gb|ELH62971.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE202]
gi|431538144|gb|ELI14245.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE105]
gi|431576548|gb|ELI49232.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE122]
gi|431589542|gb|ELI60756.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE125]
gi|431593216|gb|ELI63778.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE128]
gi|431683448|gb|ELJ49081.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE177]
gi|431711593|gb|ELJ75906.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE82]
gi|449325658|gb|EMD15561.1| dimethyladenosine transferase [Escherichia coli SEPT362]
Length = 273
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P HP+ D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V +L + P +R +SV ++
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VEVLTGMGIDPAMRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QMA 261
>gi|16128045|ref|NP_414593.1| 16S rRNA dimethyladenosine transferase, SAM-dependent [Escherichia
coli str. K-12 substr. MG1655]
gi|74310670|ref|YP_309089.1| dimethyladenosine transferase [Shigella sonnei Ss046]
gi|82542657|ref|YP_406604.1| dimethyladenosine transferase [Shigella boydii Sb227]
gi|110804117|ref|YP_687637.1| dimethyladenosine transferase [Shigella flexneri 5 str. 8401]
gi|157159522|ref|YP_001456840.1| dimethyladenosine transferase [Escherichia coli HS]
gi|170021591|ref|YP_001726545.1| dimethyladenosine transferase [Escherichia coli ATCC 8739]
gi|170079714|ref|YP_001729034.1| dimethyladenosine transferase [Escherichia coli str. K-12 substr.
DH10B]
gi|170683255|ref|YP_001742172.1| dimethyladenosine transferase [Escherichia coli SMS-3-5]
gi|188492783|ref|ZP_03000053.1| dimethyladenosine transferase [Escherichia coli 53638]
gi|193066225|ref|ZP_03047278.1| dimethyladenosine transferase [Escherichia coli E22]
gi|193070981|ref|ZP_03051910.1| dimethyladenosine transferase [Escherichia coli E110019]
gi|194429859|ref|ZP_03062371.1| dimethyladenosine transferase [Escherichia coli B171]
gi|194434556|ref|ZP_03066814.1| dimethyladenosine transferase [Shigella dysenteriae 1012]
gi|194439700|ref|ZP_03071770.1| dimethyladenosine transferase [Escherichia coli 101-1]
gi|218552636|ref|YP_002385549.1| dimethyladenosine transferase [Escherichia coli IAI1]
gi|218698473|ref|YP_002406102.1| dimethyladenosine transferase [Escherichia coli IAI39]
gi|238899456|ref|YP_002925252.1| dimethyladenosine transferase [Escherichia coli BW2952]
gi|251783617|ref|YP_002997921.1| 16S rRNA m[6][2]A1518,m[6][2]A1519 dimethyltransferase [Escherichia
coli BL21(DE3)]
gi|253774917|ref|YP_003037748.1| dimethyladenosine transferase [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254160176|ref|YP_003043284.1| dimethyladenosine transferase [Escherichia coli B str. REL606]
gi|254286979|ref|YP_003052727.1| dimethyladenosine transferase [Escherichia coli BL21(DE3)]
gi|260842288|ref|YP_003220066.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Escherichia coli O103:H2 str. 12009]
gi|260853265|ref|YP_003227156.1| dimethyladenosine transferase [Escherichia coli O26:H11 str. 11368]
gi|260866205|ref|YP_003232607.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Escherichia coli O111:H- str. 11128]
gi|293408146|ref|ZP_06651986.1| dimethyladenosine transferase [Escherichia coli B354]
gi|293417929|ref|ZP_06660551.1| dimethyladenosine transferase [Escherichia coli B185]
gi|293476715|ref|ZP_06665123.1| dimethyladenosine transferase [Escherichia coli B088]
gi|300816088|ref|ZP_07096311.1| dimethyladenosine transferase [Escherichia coli MS 107-1]
gi|300821944|ref|ZP_07102088.1| dimethyladenosine transferase [Escherichia coli MS 119-7]
gi|300905455|ref|ZP_07123221.1| dimethyladenosine transferase [Escherichia coli MS 84-1]
gi|300928650|ref|ZP_07144169.1| dimethyladenosine transferase [Escherichia coli MS 187-1]
gi|300939468|ref|ZP_07154130.1| dimethyladenosine transferase [Escherichia coli MS 21-1]
gi|300948655|ref|ZP_07162739.1| dimethyladenosine transferase [Escherichia coli MS 116-1]
gi|300956981|ref|ZP_07169233.1| dimethyladenosine transferase [Escherichia coli MS 175-1]
gi|301305057|ref|ZP_07211158.1| dimethyladenosine transferase [Escherichia coli MS 124-1]
gi|301648382|ref|ZP_07248118.1| dimethyladenosine transferase [Escherichia coli MS 146-1]
gi|307311495|ref|ZP_07591137.1| dimethyladenosine transferase [Escherichia coli W]
gi|309796040|ref|ZP_07690452.1| dimethyladenosine transferase [Escherichia coli MS 145-7]
gi|331640503|ref|ZP_08341651.1| dimethyladenosine transferase [Escherichia coli H736]
gi|331661422|ref|ZP_08362346.1| dimethyladenosine transferase [Escherichia coli TA143]
gi|331666288|ref|ZP_08367169.1| dimethyladenosine transferase [Escherichia coli TA271]
gi|331671571|ref|ZP_08372369.1| dimethyladenosine transferase [Escherichia coli TA280]
gi|331680624|ref|ZP_08381283.1| dimethyladenosine transferase [Escherichia coli H591]
gi|332281262|ref|ZP_08393675.1| dimethyladenosine transferase [Shigella sp. D9]
gi|378714605|ref|YP_005279498.1| dimethyladenosine transferase [Escherichia coli KO11FL]
gi|383176646|ref|YP_005454651.1| KsgA/Dim1 family 16S ribosomal RNA methyltransferase [Shigella
sonnei 53G]
gi|386279102|ref|ZP_10056790.1| ribosomal RNA small subunit methyltransferase A [Escherichia sp.
4_1_40B]
gi|386597051|ref|YP_006093451.1| dimethyladenosine transferase [Escherichia coli DH1]
gi|386607360|ref|YP_006122846.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Escherichia coli W]
gi|386612214|ref|YP_006131880.1| dimethyladenosine transferase KsgA [Escherichia coli UMNK88]
gi|386622465|ref|YP_006142193.1| 16S rRNA dimethyladenosine transferase, SAM-dependent [Escherichia
coli O7:K1 str. CE10]
gi|386698554|ref|YP_006162391.1| KsgA/Dim1 family 16S ribosomal RNA methyltransferase [Escherichia
coli KO11FL]
gi|386703260|ref|YP_006167107.1| Dimethyladenosine transferase [Escherichia coli P12b]
gi|386707784|ref|YP_006171505.1| KsgA/Dim1 family 16S ribosomal RNA methyltransferase [Escherichia
coli W]
gi|387605534|ref|YP_006094390.1| dimethyladenosine transferase
(S-adenosylmethionine-6-N',N'-adenosyl (rRNA)
dimethyltransferase) [Escherichia coli 042]
gi|387610528|ref|YP_006113644.1| dimethyladenosine transferase
(S-adenosylmethionine-6-N',N'-adenosyl (rRNA)
dimethyltransferase) [Escherichia coli ETEC H10407]
gi|387619824|ref|YP_006127451.1| dimethyladenosine transferase [Escherichia coli DH1]
gi|388476173|ref|YP_488357.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Escherichia coli str. K-12 substr. W3110]
gi|404373368|ref|ZP_10978631.1| ribosomal RNA small subunit methyltransferase A [Escherichia sp.
1_1_43]
gi|414574232|ref|ZP_11431447.1| dimethyladenosine transferase [Shigella sonnei 3233-85]
gi|415777621|ref|ZP_11488820.1| dimethyladenosine transferase [Escherichia coli 3431]
gi|415781032|ref|ZP_11490802.1| dimethyladenosine transferase [Escherichia coli EPECa14]
gi|415802108|ref|ZP_11499945.1| dimethyladenosine transferase [Escherichia coli E128010]
gi|415814135|ref|ZP_11505765.1| dimethyladenosine transferase [Escherichia coli LT-68]
gi|415823859|ref|ZP_11512234.1| dimethyladenosine transferase [Escherichia coli OK1180]
gi|415849763|ref|ZP_11526869.1| dimethyladenosine transferase [Shigella sonnei 53G]
gi|415863250|ref|ZP_11536541.1| dimethyladenosine transferase [Escherichia coli MS 85-1]
gi|415873154|ref|ZP_11540432.1| dimethyladenosine transferase [Escherichia coli MS 79-10]
gi|416277229|ref|ZP_11644330.1| Dimethyladenosine transferase [Shigella dysenteriae CDC 74-1112]
gi|416305462|ref|ZP_11654315.1| Dimethyladenosine transferase [Shigella flexneri CDC 796-83]
gi|416343048|ref|ZP_11677052.1| Dimethyladenosine transferase [Escherichia coli EC4100B]
gi|417133041|ref|ZP_11977826.1| dimethyladenosine transferase [Escherichia coli 5.0588]
gi|417142738|ref|ZP_11985119.1| dimethyladenosine transferase [Escherichia coli 97.0259]
gi|417151520|ref|ZP_11991047.1| dimethyladenosine transferase [Escherichia coli 1.2264]
gi|417158065|ref|ZP_11995689.1| dimethyladenosine transferase [Escherichia coli 96.0497]
gi|417160080|ref|ZP_11996999.1| dimethyladenosine transferase [Escherichia coli 99.0741]
gi|417175664|ref|ZP_12005460.1| dimethyladenosine transferase [Escherichia coli 3.2608]
gi|417181992|ref|ZP_12008828.1| dimethyladenosine transferase [Escherichia coli 93.0624]
gi|417191387|ref|ZP_12013677.1| dimethyladenosine transferase [Escherichia coli 4.0522]
gi|417216849|ref|ZP_12023521.1| dimethyladenosine transferase [Escherichia coli JB1-95]
gi|417224492|ref|ZP_12027783.1| dimethyladenosine transferase [Escherichia coli 96.154]
gi|417230286|ref|ZP_12031872.1| dimethyladenosine transferase [Escherichia coli 5.0959]
gi|417244385|ref|ZP_12038395.1| dimethyladenosine transferase [Escherichia coli 9.0111]
gi|417252631|ref|ZP_12044390.1| dimethyladenosine transferase [Escherichia coli 4.0967]
gi|417263386|ref|ZP_12050795.1| dimethyladenosine transferase [Escherichia coli 2.3916]
gi|417268664|ref|ZP_12056024.1| dimethyladenosine transferase [Escherichia coli 3.3884]
gi|417273961|ref|ZP_12061306.1| dimethyladenosine transferase [Escherichia coli 2.4168]
gi|417277898|ref|ZP_12065218.1| dimethyladenosine transferase [Escherichia coli 3.2303]
gi|417293908|ref|ZP_12081187.1| dimethyladenosine transferase [Escherichia coli B41]
gi|417295442|ref|ZP_12082695.1| dimethyladenosine transferase [Escherichia coli 900105 (10e)]
gi|417306579|ref|ZP_12093469.1| Ribosomal RNA small subunit methyltransferase A [Escherichia coli
PCN033]
gi|417584118|ref|ZP_12234912.1| dimethyladenosine transferase [Escherichia coli STEC_B2F1]
gi|417589667|ref|ZP_12240388.1| dimethyladenosine transferase [Escherichia coli 2534-86]
gi|417600297|ref|ZP_12250886.1| dimethyladenosine transferase [Escherichia coli STEC_94C]
gi|417611061|ref|ZP_12261537.1| dimethyladenosine transferase [Escherichia coli STEC_EH250]
gi|417616386|ref|ZP_12266826.1| dimethyladenosine transferase [Escherichia coli G58-1]
gi|417621275|ref|ZP_12271607.1| dimethyladenosine transferase [Escherichia coli STEC_H.1.8]
gi|417631967|ref|ZP_12282193.1| dimethyladenosine transferase [Escherichia coli STEC_MHI813]
gi|417632523|ref|ZP_12282747.1| dimethyladenosine transferase [Escherichia coli STEC_S1191]
gi|417670183|ref|ZP_12319712.1| dimethyladenosine transferase [Escherichia coli STEC_O31]
gi|417670421|ref|ZP_12319923.1| dimethyladenosine transferase [Shigella dysenteriae 155-74]
gi|417680261|ref|ZP_12329651.1| dimethyladenosine transferase [Shigella boydii 3594-74]
gi|417687816|ref|ZP_12337069.1| dimethyladenosine transferase [Shigella boydii 5216-82]
gi|417699803|ref|ZP_12348951.1| dimethyladenosine transferase [Shigella flexneri K-218]
gi|417736882|ref|ZP_12385496.1| dimethyladenosine transferase [Shigella flexneri 4343-70]
gi|417946455|ref|ZP_12589672.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli XH140A]
gi|417976037|ref|ZP_12616833.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli XH001]
gi|418260766|ref|ZP_12883237.1| dimethyladenosine transferase [Shigella flexneri 6603-63]
gi|418261465|ref|ZP_12883459.1| dimethyladenosine transferase [Shigella sonnei str. Moseley]
gi|418300938|ref|ZP_12912732.1| dimethyladenosine transferase [Escherichia coli UMNF18]
gi|418941838|ref|ZP_13495149.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli O157:H43 str. T22]
gi|419140411|ref|ZP_13685171.1| dimethyladenosine transferase [Escherichia coli DEC6A]
gi|419146081|ref|ZP_13690779.1| dimethyladenosine transferase [Escherichia coli DEC6B]
gi|419151888|ref|ZP_13696481.1| dimethyladenosine transferase [Escherichia coli DEC6C]
gi|419168017|ref|ZP_13712418.1| dimethyladenosine transferase [Escherichia coli DEC7A]
gi|419173446|ref|ZP_13717308.1| dimethyladenosine transferase [Escherichia coli DEC7B]
gi|419179067|ref|ZP_13722694.1| dimethyladenosine transferase [Escherichia coli DEC7C]
gi|419184525|ref|ZP_13728051.1| dimethyladenosine transferase [Escherichia coli DEC7D]
gi|419189789|ref|ZP_13733262.1| dimethyladenosine transferase [Escherichia coli DEC7E]
gi|419195003|ref|ZP_13738418.1| dimethyladenosine transferase [Escherichia coli DEC8A]
gi|419201205|ref|ZP_13744437.1| dimethyladenosine transferase [Escherichia coli DEC8B]
gi|419206991|ref|ZP_13750122.1| dimethyladenosine transferase [Escherichia coli DEC8C]
gi|419213420|ref|ZP_13756455.1| dimethyladenosine transferase [Escherichia coli DEC8D]
gi|419219260|ref|ZP_13762221.1| dimethyladenosine transferase [Escherichia coli DEC8E]
gi|419224686|ref|ZP_13767582.1| dimethyladenosine transferase [Escherichia coli DEC9A]
gi|419235760|ref|ZP_13778516.1| dimethyladenosine transferase [Escherichia coli DEC9B]
gi|419235853|ref|ZP_13778607.1| dimethyladenosine transferase [Escherichia coli DEC9C]
gi|419246775|ref|ZP_13789398.1| dimethyladenosine transferase [Escherichia coli DEC9D]
gi|419246845|ref|ZP_13789465.1| dimethyladenosine transferase [Escherichia coli DEC9E]
gi|419252681|ref|ZP_13795233.1| dimethyladenosine transferase [Escherichia coli DEC10A]
gi|419258625|ref|ZP_13801089.1| dimethyladenosine transferase [Escherichia coli DEC10B]
gi|419264599|ref|ZP_13806989.1| dimethyladenosine transferase [Escherichia coli DEC10C]
gi|419275988|ref|ZP_13818266.1| dimethyladenosine transferase [Escherichia coli DEC10D]
gi|419276147|ref|ZP_13818420.1| dimethyladenosine transferase [Escherichia coli DEC10E]
gi|419281677|ref|ZP_13823902.1| dimethyladenosine transferase [Escherichia coli DEC10F]
gi|419292719|ref|ZP_13834797.1| dimethyladenosine transferase [Escherichia coli DEC11A]
gi|419298039|ref|ZP_13840067.1| dimethyladenosine transferase [Escherichia coli DEC11B]
gi|419298231|ref|ZP_13840257.1| dimethyladenosine transferase [Escherichia coli DEC11C]
gi|419304554|ref|ZP_13846471.1| dimethyladenosine transferase [Escherichia coli DEC11D]
gi|419309590|ref|ZP_13851470.1| dimethyladenosine transferase [Escherichia coli DEC11E]
gi|419314886|ref|ZP_13856719.1| dimethyladenosine transferase [Escherichia coli DEC12A]
gi|419320685|ref|ZP_13862431.1| dimethyladenosine transferase [Escherichia coli DEC12B]
gi|419326862|ref|ZP_13868500.1| dimethyladenosine transferase [Escherichia coli DEC12C]
gi|419332301|ref|ZP_13873869.1| dimethyladenosine transferase [Escherichia coli DEC12D]
gi|419338055|ref|ZP_13879547.1| dimethyladenosine transferase [Escherichia coli DEC12E]
gi|419343711|ref|ZP_13885098.1| dimethyladenosine transferase [Escherichia coli DEC13A]
gi|419348134|ref|ZP_13889490.1| dimethyladenosine transferase [Escherichia coli DEC13B]
gi|419353034|ref|ZP_13894323.1| dimethyladenosine transferase [Escherichia coli DEC13C]
gi|419358380|ref|ZP_13899613.1| dimethyladenosine transferase [Escherichia coli DEC13D]
gi|419363340|ref|ZP_13904525.1| dimethyladenosine transferase [Escherichia coli DEC13E]
gi|419373475|ref|ZP_13914538.1| dimethyladenosine transferase [Escherichia coli DEC14B]
gi|419378904|ref|ZP_13919888.1| dimethyladenosine transferase [Escherichia coli DEC14C]
gi|419389350|ref|ZP_13930201.1| dimethyladenosine transferase [Escherichia coli DEC14D]
gi|419389461|ref|ZP_13930305.1| dimethyladenosine transferase [Escherichia coli DEC15A]
gi|419399955|ref|ZP_13940709.1| dimethyladenosine transferase [Escherichia coli DEC15B]
gi|419405200|ref|ZP_13945911.1| dimethyladenosine transferase [Escherichia coli DEC15C]
gi|419410358|ref|ZP_13951037.1| dimethyladenosine transferase [Escherichia coli DEC15D]
gi|419410671|ref|ZP_13951348.1| dimethyladenosine transferase [Escherichia coli DEC15E]
gi|419865084|ref|ZP_14387475.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli O103:H25 str. CVM9340]
gi|419868526|ref|ZP_14390796.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli O103:H2 str. CVM9450]
gi|419873230|ref|ZP_14395222.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli O111:H11 str. CVM9534]
gi|419882212|ref|ZP_14403466.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli O111:H11 str. CVM9545]
gi|419889269|ref|ZP_14409688.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli O111:H8 str. CVM9570]
gi|419897598|ref|ZP_14417180.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli O111:H8 str. CVM9574]
gi|419898927|ref|ZP_14418463.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli O26:H11 str. CVM9942]
gi|419905219|ref|ZP_14424187.1| hypothetical protein ECO10026_28644 [Escherichia coli O26:H11 str.
CVM10026]
gi|419921911|ref|ZP_14439944.1| dimethyladenosine transferase [Escherichia coli 541-15]
gi|419929484|ref|ZP_14447157.1| dimethyladenosine transferase [Escherichia coli 541-1]
gi|419937972|ref|ZP_14454817.1| dimethyladenosine transferase [Escherichia coli 75]
gi|419951374|ref|ZP_14467567.1| dimethyladenosine transferase [Escherichia coli CUMT8]
gi|420087166|ref|ZP_14599137.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli O111:H8 str. CVM9602]
gi|420092555|ref|ZP_14604257.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli O111:H8 str. CVM9634]
gi|420100148|ref|ZP_14611339.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli O111:H11 str. CVM9455]
gi|420111722|ref|ZP_14621544.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli O111:H11 str. CVM9553]
gi|420115038|ref|ZP_14624626.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli O26:H11 str. CVM10021]
gi|420120287|ref|ZP_14629497.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli O26:H11 str. CVM10030]
gi|420128279|ref|ZP_14636838.1| dimethyladenosine transferase [Escherichia coli O26:H11 str.
CVM10224]
gi|420132247|ref|ZP_14640627.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli O26:H11 str. CVM9952]
gi|420323704|ref|ZP_14825495.1| dimethyladenosine transferase [Shigella flexneri CCH060]
gi|420329019|ref|ZP_14830737.1| dimethyladenosine transferase [Shigella flexneri K-1770]
gi|420350921|ref|ZP_14852124.1| dimethyladenosine transferase [Shigella boydii 4444-74]
gi|420356608|ref|ZP_14857635.1| dimethyladenosine transferase [Shigella sonnei 3226-85]
gi|420361595|ref|ZP_14862529.1| dimethyladenosine transferase [Shigella sonnei 4822-66]
gi|420369479|ref|ZP_14870181.1| dimethyladenosine transferase [Shigella flexneri 1235-66]
gi|420378415|ref|ZP_14877920.1| dimethyladenosine transferase [Shigella dysenteriae 225-75]
gi|420383683|ref|ZP_14883076.1| dimethyladenosine transferase [Escherichia coli EPECa12]
gi|420389378|ref|ZP_14888652.1| dimethyladenosine transferase [Escherichia coli EPEC C342-62]
gi|421680773|ref|ZP_16120616.1| dimethyladenosine transferase [Shigella flexneri 1485-80]
gi|421775246|ref|ZP_16211856.1| dimethyladenosine transferase [Escherichia coli AD30]
gi|422333216|ref|ZP_16414227.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
4_1_47FAA]
gi|422354318|ref|ZP_16435060.1| dimethyladenosine transferase [Escherichia coli MS 117-3]
gi|422761731|ref|ZP_16815489.1| dimethyladenosine transferase [Escherichia coli E1167]
gi|422768304|ref|ZP_16822029.1| dimethyladenosine transferase [Escherichia coli E1520]
gi|422773026|ref|ZP_16826712.1| dimethyladenosine transferase [Escherichia coli E482]
gi|422783179|ref|ZP_16835963.1| dimethyladenosine transferase [Escherichia coli TW10509]
gi|422788292|ref|ZP_16841029.1| dimethyladenosine transferase [Escherichia coli H489]
gi|422792703|ref|ZP_16845402.1| dimethyladenosine transferase [Escherichia coli TA007]
gi|422816071|ref|ZP_16864286.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
M919]
gi|422828342|ref|ZP_16876513.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
B093]
gi|422834346|ref|ZP_16882408.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
E101]
gi|422971545|ref|ZP_16974820.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
TA124]
gi|423709778|ref|ZP_17684132.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
B799]
gi|424748177|ref|ZP_18176326.1| dimethyladenosine transferase [Escherichia coli O26:H11 str.
CFSAN001629]
gi|424764780|ref|ZP_18192197.1| dimethyladenosine transferase [Escherichia coli O111:H11 str.
CFSAN001630]
gi|424774659|ref|ZP_18201669.1| dimethyladenosine transferase [Escherichia coli O111:H8 str.
CFSAN001632]
gi|424836585|ref|ZP_18261222.1| dimethyladenosine transferase [Shigella flexneri 5a str. M90T]
gi|425113363|ref|ZP_18515219.1| dimethyladenosine transferase [Escherichia coli 8.0566]
gi|425118116|ref|ZP_18519871.1| dimethyladenosine transferase [Escherichia coli 8.0569]
gi|425281380|ref|ZP_18672511.1| dimethyladenosine transferase [Escherichia coli TW00353]
gi|425303562|ref|ZP_18693378.1| dimethyladenosine transferase [Escherichia coli N1]
gi|425376782|ref|ZP_18761216.1| dimethyladenosine transferase [Escherichia coli EC1865]
gi|425420648|ref|ZP_18801892.1| dimethyladenosine transferase [Escherichia coli 0.1288]
gi|427803126|ref|ZP_18970193.1| S-adenosylmethionine-6-N [Escherichia coli chi7122]
gi|427807728|ref|ZP_18974793.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Escherichia coli]
gi|432368047|ref|ZP_19611155.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE10]
gi|432379672|ref|ZP_19622647.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE12]
gi|432389948|ref|ZP_19632814.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE21]
gi|432415009|ref|ZP_19657646.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE44]
gi|432452809|ref|ZP_19695056.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE193]
gi|432479381|ref|ZP_19721347.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE210]
gi|432483698|ref|ZP_19725627.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE212]
gi|432492359|ref|ZP_19734204.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE213]
gi|432529354|ref|ZP_19766413.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE233]
gi|432546372|ref|ZP_19783184.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE236]
gi|432546777|ref|ZP_19783577.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE237]
gi|432578769|ref|ZP_19815205.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE56]
gi|432625021|ref|ZP_19861020.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE76]
gi|432625614|ref|ZP_19861603.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE77]
gi|432635371|ref|ZP_19871262.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE81]
gi|432659322|ref|ZP_19894987.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE111]
gi|432668877|ref|ZP_19904433.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE119]
gi|432677634|ref|ZP_19913065.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE142]
gi|432678461|ref|ZP_19913866.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE143]
gi|432683935|ref|ZP_19919258.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE156]
gi|432689840|ref|ZP_19925094.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE161]
gi|432702598|ref|ZP_19937730.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE171]
gi|432717066|ref|ZP_19952071.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE9]
gi|432735519|ref|ZP_19970311.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE42]
gi|432791283|ref|ZP_20025380.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE78]
gi|432797253|ref|ZP_20031282.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE79]
gi|432808690|ref|ZP_20042600.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE91]
gi|432812203|ref|ZP_20046053.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE101]
gi|432830032|ref|ZP_20063642.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE135]
gi|432833157|ref|ZP_20066706.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE136]
gi|432837614|ref|ZP_20071111.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE140]
gi|432856864|ref|ZP_20084115.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE144]
gi|432858358|ref|ZP_20084854.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE146]
gi|432872597|ref|ZP_20092413.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE147]
gi|432879312|ref|ZP_20096339.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE154]
gi|432932317|ref|ZP_20132219.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE184]
gi|432952449|ref|ZP_20145455.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE197]
gi|432966198|ref|ZP_20155118.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE203]
gi|433031460|ref|ZP_20219286.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE112]
gi|433090404|ref|ZP_20276717.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE138]
gi|433128342|ref|ZP_20313831.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE163]
gi|433133243|ref|ZP_20318630.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE166]
gi|433171822|ref|ZP_20356392.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE232]
gi|433191846|ref|ZP_20375879.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE90]
gi|433201495|ref|ZP_20385313.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE95]
gi|442597933|ref|ZP_21015711.1| SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase [Escherichia coli O5:K4(L):H4 str.
ATCC 23502]
gi|443616068|ref|YP_007379924.1| dimethyladenosine transferase [Escherichia coli APEC O78]
gi|450237862|ref|ZP_21898746.1| dimethyladenosine transferase [Escherichia coli S17]
gi|125699|sp|P06992.1|RSMA_ECOLI RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=High level kasugamycin
resistance protein KsgA; AltName: Full=Kasugamycin
dimethyltransferase; AltName:
Full=S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
dimethyltransferase
gi|119365842|sp|Q326I2.1|RSMA_SHIBS RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|119365844|sp|Q3Z5V8.1|RSMA_SHISS RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|123147300|sp|Q0T8E4.1|RSMA_SHIF8 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|166987693|sp|A7ZW03.1|RSMA_ECOHS RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|189028807|sp|B1IRC5.1|RSMA_ECOLC RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226732575|sp|B7NHF7.1|RSMA_ECO7I RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226732576|sp|B7M0E8.1|RSMA_ECO8A RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226732577|sp|B1XC52.1|RSMA_ECODH RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226732580|sp|B1LFY7.1|RSMA_ECOSM RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|259494249|sp|C4ZPX7.1|RSMA_ECOBW RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|40917|emb|CAA28417.1| unnamed protein product [Escherichia coli]
gi|146571|gb|AAA24049.1| methyltransferase (ksgA) [Escherichia coli]
gi|1786236|gb|AAC73162.1| 16S rRNA m(6)A1518, m(6)A1519 dimethyltransferase, SAM-dependent
[Escherichia coli str. K-12 substr. MG1655]
gi|73854147|gb|AAZ86854.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Shigella sonnei Ss046]
gi|81244068|gb|ABB64776.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Shigella boydii Sb227]
gi|85674303|dbj|BAE76038.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Escherichia coli str. K12 substr. W3110]
gi|110613665|gb|ABF02332.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Shigella flexneri 5 str. 8401]
gi|157065202|gb|ABV04457.1| dimethyladenosine transferase [Escherichia coli HS]
gi|169756519|gb|ACA79218.1| dimethyladenosine transferase [Escherichia coli ATCC 8739]
gi|169887549|gb|ACB01256.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Escherichia coli str. K-12 substr. DH10B]
gi|170520973|gb|ACB19151.1| dimethyladenosine transferase [Escherichia coli SMS-3-5]
gi|188487982|gb|EDU63085.1| dimethyladenosine transferase [Escherichia coli 53638]
gi|192926150|gb|EDV80791.1| dimethyladenosine transferase [Escherichia coli E22]
gi|192955711|gb|EDV86185.1| dimethyladenosine transferase [Escherichia coli E110019]
gi|194412078|gb|EDX28388.1| dimethyladenosine transferase [Escherichia coli B171]
gi|194417209|gb|EDX33320.1| dimethyladenosine transferase [Shigella dysenteriae 1012]
gi|194421385|gb|EDX37402.1| dimethyladenosine transferase [Escherichia coli 101-1]
gi|218359404|emb|CAQ96943.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Escherichia coli IAI1]
gi|218368459|emb|CAR16195.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Escherichia coli IAI39]
gi|226840574|gb|EEH72576.1| ribosomal RNA small subunit methyltransferase A [Escherichia sp.
1_1_43]
gi|238863510|gb|ACR65508.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Escherichia coli BW2952]
gi|242375890|emb|CAQ30571.1| 16S rRNA m[6][2]A1518,m[6][2]A1519 dimethyltransferase [Escherichia
coli BL21(DE3)]
gi|253325961|gb|ACT30563.1| dimethyladenosine transferase [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253972077|gb|ACT37748.1| dimethyladenosine transferase [Escherichia coli B str. REL606]
gi|253976286|gb|ACT41956.1| dimethyladenosine transferase [Escherichia coli BL21(DE3)]
gi|257751914|dbj|BAI23416.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Escherichia coli O26:H11 str. 11368]
gi|257757435|dbj|BAI28932.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Escherichia coli O103:H2 str. 12009]
gi|257762561|dbj|BAI34056.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Escherichia coli O111:H- str. 11128]
gi|260450740|gb|ACX41162.1| dimethyladenosine transferase [Escherichia coli DH1]
gi|284919834|emb|CBG32889.1| dimethyladenosine transferase
(S-adenosylmethionine-6-N',N'-adenosyl (rRNA)
dimethyltransferase) [Escherichia coli 042]
gi|291321168|gb|EFE60610.1| dimethyladenosine transferase [Escherichia coli B088]
gi|291430647|gb|EFF03645.1| dimethyladenosine transferase [Escherichia coli B185]
gi|291472397|gb|EFF14879.1| dimethyladenosine transferase [Escherichia coli B354]
gi|300316271|gb|EFJ66055.1| dimethyladenosine transferase [Escherichia coli MS 175-1]
gi|300402671|gb|EFJ86209.1| dimethyladenosine transferase [Escherichia coli MS 84-1]
gi|300451881|gb|EFK15501.1| dimethyladenosine transferase [Escherichia coli MS 116-1]
gi|300455689|gb|EFK19182.1| dimethyladenosine transferase [Escherichia coli MS 21-1]
gi|300463319|gb|EFK26812.1| dimethyladenosine transferase [Escherichia coli MS 187-1]
gi|300525544|gb|EFK46613.1| dimethyladenosine transferase [Escherichia coli MS 119-7]
gi|300531295|gb|EFK52357.1| dimethyladenosine transferase [Escherichia coli MS 107-1]
gi|300839664|gb|EFK67424.1| dimethyladenosine transferase [Escherichia coli MS 124-1]
gi|301073517|gb|EFK88323.1| dimethyladenosine transferase [Escherichia coli MS 146-1]
gi|306908474|gb|EFN38972.1| dimethyladenosine transferase [Escherichia coli W]
gi|308120282|gb|EFO57544.1| dimethyladenosine transferase [Escherichia coli MS 145-7]
gi|309700264|emb|CBI99552.1| dimethyladenosine transferase
(S-adenosylmethionine-6-N',N'-adenosyl (rRNA)
dimethyltransferase) [Escherichia coli ETEC H10407]
gi|315059277|gb|ADT73604.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Escherichia coli W]
gi|315134747|dbj|BAJ41906.1| dimethyladenosine transferase [Escherichia coli DH1]
gi|315255673|gb|EFU35641.1| dimethyladenosine transferase [Escherichia coli MS 85-1]
gi|315616172|gb|EFU96791.1| dimethyladenosine transferase [Escherichia coli 3431]
gi|320172861|gb|EFW48093.1| Dimethyladenosine transferase [Shigella dysenteriae CDC 74-1112]
gi|320182964|gb|EFW57832.1| Dimethyladenosine transferase [Shigella flexneri CDC 796-83]
gi|320200429|gb|EFW75015.1| Dimethyladenosine transferase [Escherichia coli EC4100B]
gi|323157886|gb|EFZ43989.1| dimethyladenosine transferase [Escherichia coli EPECa14]
gi|323160077|gb|EFZ46039.1| dimethyladenosine transferase [Escherichia coli E128010]
gi|323166103|gb|EFZ51882.1| dimethyladenosine transferase [Shigella sonnei 53G]
gi|323171211|gb|EFZ56859.1| dimethyladenosine transferase [Escherichia coli LT-68]
gi|323176360|gb|EFZ61952.1| dimethyladenosine transferase [Escherichia coli OK1180]
gi|323380166|gb|ADX52434.1| dimethyladenosine transferase [Escherichia coli KO11FL]
gi|323935104|gb|EGB31471.1| dimethyladenosine transferase [Escherichia coli E1520]
gi|323939727|gb|EGB35929.1| dimethyladenosine transferase [Escherichia coli E482]
gi|323960000|gb|EGB55646.1| dimethyladenosine transferase [Escherichia coli H489]
gi|323970725|gb|EGB65979.1| dimethyladenosine transferase [Escherichia coli TA007]
gi|323975781|gb|EGB70877.1| dimethyladenosine transferase [Escherichia coli TW10509]
gi|324017680|gb|EGB86899.1| dimethyladenosine transferase [Escherichia coli MS 117-3]
gi|324118403|gb|EGC12297.1| dimethyladenosine transferase [Escherichia coli E1167]
gi|331040249|gb|EGI12456.1| dimethyladenosine transferase [Escherichia coli H736]
gi|331061337|gb|EGI33300.1| dimethyladenosine transferase [Escherichia coli TA143]
gi|331066499|gb|EGI38376.1| dimethyladenosine transferase [Escherichia coli TA271]
gi|331071416|gb|EGI42773.1| dimethyladenosine transferase [Escherichia coli TA280]
gi|331072087|gb|EGI43423.1| dimethyladenosine transferase [Escherichia coli H591]
gi|332095340|gb|EGJ00363.1| dimethyladenosine transferase [Shigella boydii 5216-82]
gi|332097801|gb|EGJ02774.1| dimethyladenosine transferase [Shigella dysenteriae 155-74]
gi|332098860|gb|EGJ03811.1| dimethyladenosine transferase [Shigella boydii 3594-74]
gi|332103614|gb|EGJ06960.1| dimethyladenosine transferase [Shigella sp. D9]
gi|332341383|gb|AEE54717.1| dimethyladenosine transferase KsgA [Escherichia coli UMNK88]
gi|332762612|gb|EGJ92877.1| dimethyladenosine transferase [Shigella flexneri 4343-70]
gi|333009061|gb|EGK28517.1| dimethyladenosine transferase [Shigella flexneri K-218]
gi|338771785|gb|EGP26515.1| Ribosomal RNA small subunit methyltransferase A [Escherichia coli
PCN033]
gi|339413036|gb|AEJ54708.1| dimethyladenosine transferase [Escherichia coli UMNF18]
gi|342361797|gb|EGU25927.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli XH140A]
gi|342931191|gb|EGU99913.1| dimethyladenosine transferase [Escherichia coli MS 79-10]
gi|344194435|gb|EGV48509.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli XH001]
gi|345332349|gb|EGW64807.1| dimethyladenosine transferase [Escherichia coli STEC_B2F1]
gi|345346025|gb|EGW78361.1| dimethyladenosine transferase [Escherichia coli 2534-86]
gi|345354907|gb|EGW87122.1| dimethyladenosine transferase [Escherichia coli STEC_94C]
gi|345367035|gb|EGW99122.1| dimethyladenosine transferase [Escherichia coli STEC_EH250]
gi|345368118|gb|EGX00125.1| dimethyladenosine transferase [Escherichia coli STEC_MHI813]
gi|345384135|gb|EGX14004.1| dimethyladenosine transferase [Escherichia coli G58-1]
gi|345387248|gb|EGX17072.1| dimethyladenosine transferase [Escherichia coli STEC_H.1.8]
gi|345392041|gb|EGX21827.1| dimethyladenosine transferase [Escherichia coli STEC_S1191]
gi|349736203|gb|AEQ10909.1| 16S rRNA dimethyladenosine transferase, SAM-dependent [Escherichia
coli O7:K1 str. CE10]
gi|359330917|dbj|BAL37364.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Escherichia coli str. K-12 substr. MDS42]
gi|371598621|gb|EHN87418.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
TA124]
gi|371601866|gb|EHN90585.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
E101]
gi|371614378|gb|EHO02862.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
B093]
gi|373245731|gb|EHP65196.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
4_1_47FAA]
gi|375322858|gb|EHS68592.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli O157:H43 str. T22]
gi|378000928|gb|EHV63990.1| dimethyladenosine transferase [Escherichia coli DEC6A]
gi|378002517|gb|EHV65568.1| dimethyladenosine transferase [Escherichia coli DEC6B]
gi|378004300|gb|EHV67323.1| dimethyladenosine transferase [Escherichia coli DEC6C]
gi|378019299|gb|EHV82130.1| dimethyladenosine transferase [Escherichia coli DEC7A]
gi|378028614|gb|EHV91231.1| dimethyladenosine transferase [Escherichia coli DEC7C]
gi|378034152|gb|EHV96718.1| dimethyladenosine transferase [Escherichia coli DEC7D]
gi|378038937|gb|EHW01442.1| dimethyladenosine transferase [Escherichia coli DEC7B]
gi|378043237|gb|EHW05673.1| dimethyladenosine transferase [Escherichia coli DEC7E]
gi|378054517|gb|EHW16795.1| dimethyladenosine transferase [Escherichia coli DEC8A]
gi|378058112|gb|EHW20332.1| dimethyladenosine transferase [Escherichia coli DEC8B]
gi|378064533|gb|EHW26693.1| dimethyladenosine transferase [Escherichia coli DEC8C]
gi|378070035|gb|EHW32118.1| dimethyladenosine transferase [Escherichia coli DEC8D]
gi|378071230|gb|EHW33301.1| dimethyladenosine transferase [Escherichia coli DEC9B]
gi|378073766|gb|EHW35811.1| dimethyladenosine transferase [Escherichia coli DEC8E]
gi|378083406|gb|EHW45339.1| dimethyladenosine transferase [Escherichia coli DEC9A]
gi|378085075|gb|EHW46969.1| dimethyladenosine transferase [Escherichia coli DEC9D]
gi|378091686|gb|EHW53514.1| dimethyladenosine transferase [Escherichia coli DEC9C]
gi|378104336|gb|EHW65995.1| dimethyladenosine transferase [Escherichia coli DEC9E]
gi|378108785|gb|EHW70397.1| dimethyladenosine transferase [Escherichia coli DEC10A]
gi|378110458|gb|EHW72053.1| dimethyladenosine transferase [Escherichia coli DEC10D]
gi|378118647|gb|EHW80149.1| dimethyladenosine transferase [Escherichia coli DEC10B]
gi|378120213|gb|EHW81694.1| dimethyladenosine transferase [Escherichia coli DEC10C]
gi|378123490|gb|EHW84908.1| dimethyladenosine transferase [Escherichia coli DEC11A]
gi|378135067|gb|EHW96380.1| dimethyladenosine transferase [Escherichia coli DEC10E]
gi|378137268|gb|EHW98551.1| dimethyladenosine transferase [Escherichia coli DEC11B]
gi|378141277|gb|EHX02494.1| dimethyladenosine transferase [Escherichia coli DEC10F]
gi|378154208|gb|EHX15284.1| dimethyladenosine transferase [Escherichia coli DEC11D]
gi|378158362|gb|EHX19387.1| dimethyladenosine transferase [Escherichia coli DEC11C]
gi|378162231|gb|EHX23196.1| dimethyladenosine transferase [Escherichia coli DEC11E]
gi|378176383|gb|EHX37189.1| dimethyladenosine transferase [Escherichia coli DEC12A]
gi|378176755|gb|EHX37560.1| dimethyladenosine transferase [Escherichia coli DEC12B]
gi|378177762|gb|EHX38550.1| dimethyladenosine transferase [Escherichia coli DEC12C]
gi|378191746|gb|EHX52321.1| dimethyladenosine transferase [Escherichia coli DEC13A]
gi|378192473|gb|EHX53031.1| dimethyladenosine transferase [Escherichia coli DEC12D]
gi|378194327|gb|EHX54842.1| dimethyladenosine transferase [Escherichia coli DEC12E]
gi|378205913|gb|EHX66320.1| dimethyladenosine transferase [Escherichia coli DEC13B]
gi|378208987|gb|EHX69363.1| dimethyladenosine transferase [Escherichia coli DEC13D]
gi|378209669|gb|EHX70037.1| dimethyladenosine transferase [Escherichia coli DEC13C]
gi|378220418|gb|EHX80676.1| dimethyladenosine transferase [Escherichia coli DEC13E]
gi|378224391|gb|EHX84594.1| dimethyladenosine transferase [Escherichia coli DEC14D]
gi|378228009|gb|EHX88176.1| dimethyladenosine transferase [Escherichia coli DEC14B]
gi|378235404|gb|EHX95474.1| dimethyladenosine transferase [Escherichia coli DEC14C]
gi|378239105|gb|EHX99099.1| dimethyladenosine transferase [Escherichia coli DEC15B]
gi|378241955|gb|EHY01921.1| dimethyladenosine transferase [Escherichia coli DEC15C]
gi|378246309|gb|EHY06236.1| dimethyladenosine transferase [Escherichia coli DEC15A]
gi|378249823|gb|EHY09732.1| dimethyladenosine transferase [Escherichia coli DEC15D]
gi|378261681|gb|EHY21472.1| dimethyladenosine transferase [Escherichia coli DEC15E]
gi|383101428|gb|AFG38937.1| Dimethyladenosine transferase [Escherichia coli P12b]
gi|383390081|gb|AFH15039.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli KO11FL]
gi|383403476|gb|AFH09719.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli W]
gi|383465637|gb|EID60658.1| dimethyladenosine transferase [Shigella flexneri 5a str. M90T]
gi|385540470|gb|EIF87291.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
M919]
gi|385705226|gb|EIG42292.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
B799]
gi|386123691|gb|EIG72280.1| ribosomal RNA small subunit methyltransferase A [Escherichia sp.
4_1_40B]
gi|386150895|gb|EIH02184.1| dimethyladenosine transferase [Escherichia coli 5.0588]
gi|386154763|gb|EIH11121.1| dimethyladenosine transferase [Escherichia coli 97.0259]
gi|386159711|gb|EIH21525.1| dimethyladenosine transferase [Escherichia coli 1.2264]
gi|386166815|gb|EIH33335.1| dimethyladenosine transferase [Escherichia coli 96.0497]
gi|386174571|gb|EIH46564.1| dimethyladenosine transferase [Escherichia coli 99.0741]
gi|386178356|gb|EIH55835.1| dimethyladenosine transferase [Escherichia coli 3.2608]
gi|386184981|gb|EIH67717.1| dimethyladenosine transferase [Escherichia coli 93.0624]
gi|386191277|gb|EIH80021.1| dimethyladenosine transferase [Escherichia coli 4.0522]
gi|386193711|gb|EIH87995.1| dimethyladenosine transferase [Escherichia coli JB1-95]
gi|386199540|gb|EIH98531.1| dimethyladenosine transferase [Escherichia coli 96.154]
gi|386206776|gb|EII11282.1| dimethyladenosine transferase [Escherichia coli 5.0959]
gi|386211050|gb|EII21520.1| dimethyladenosine transferase [Escherichia coli 9.0111]
gi|386216562|gb|EII33051.1| dimethyladenosine transferase [Escherichia coli 4.0967]
gi|386222749|gb|EII45163.1| dimethyladenosine transferase [Escherichia coli 2.3916]
gi|386227469|gb|EII54825.1| dimethyladenosine transferase [Escherichia coli 3.3884]
gi|386234143|gb|EII66123.1| dimethyladenosine transferase [Escherichia coli 2.4168]
gi|386239308|gb|EII76238.1| dimethyladenosine transferase [Escherichia coli 3.2303]
gi|386252096|gb|EIJ01788.1| dimethyladenosine transferase [Escherichia coli B41]
gi|386261061|gb|EIJ16529.1| dimethyladenosine transferase [Escherichia coli 900105 (10e)]
gi|388338317|gb|EIL04785.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli O103:H25 str. CVM9340]
gi|388344613|gb|EIL10444.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli O103:H2 str. CVM9450]
gi|388352959|gb|EIL18041.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli O111:H11 str. CVM9534]
gi|388355013|gb|EIL19878.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli O111:H8 str. CVM9574]
gi|388358085|gb|EIL22573.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli O111:H8 str. CVM9570]
gi|388362511|gb|EIL26516.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli O111:H11 str. CVM9545]
gi|388380949|gb|EIL43530.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli O26:H11 str. CVM9942]
gi|388381396|gb|EIL43963.1| hypothetical protein ECO10026_28644 [Escherichia coli O26:H11 str.
CVM10026]
gi|388397040|gb|EIL58082.1| dimethyladenosine transferase [Escherichia coli 541-15]
gi|388403278|gb|EIL63813.1| dimethyladenosine transferase [Escherichia coli 541-1]
gi|388411265|gb|EIL71449.1| dimethyladenosine transferase [Escherichia coli 75]
gi|388414659|gb|EIL74608.1| dimethyladenosine transferase [Escherichia coli CUMT8]
gi|391257981|gb|EIQ17088.1| dimethyladenosine transferase [Shigella flexneri CCH060]
gi|391261857|gb|EIQ20902.1| dimethyladenosine transferase [Shigella flexneri K-1770]
gi|391289755|gb|EIQ48239.1| dimethyladenosine transferase [Shigella boydii 4444-74]
gi|391290117|gb|EIQ48592.1| dimethyladenosine transferase [Shigella sonnei 3233-85]
gi|391290716|gb|EIQ49175.1| dimethyladenosine transferase [Shigella sonnei 3226-85]
gi|391297673|gb|EIQ55718.1| dimethyladenosine transferase [Shigella sonnei 4822-66]
gi|391308004|gb|EIQ65731.1| dimethyladenosine transferase [Shigella dysenteriae 225-75]
gi|391310612|gb|EIQ68264.1| dimethyladenosine transferase [Escherichia coli EPECa12]
gi|391315611|gb|EIQ73135.1| dimethyladenosine transferase [Escherichia coli EPEC C342-62]
gi|391321209|gb|EIQ77955.1| dimethyladenosine transferase [Shigella flexneri 1235-66]
gi|394386069|gb|EJE63583.1| dimethyladenosine transferase [Escherichia coli O26:H11 str.
CVM10224]
gi|394393416|gb|EJE70101.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli O111:H8 str. CVM9602]
gi|394397906|gb|EJE74132.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli O111:H11 str. CVM9553]
gi|394400573|gb|EJE76487.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli O111:H8 str. CVM9634]
gi|394407582|gb|EJE82400.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli O26:H11 str. CVM10021]
gi|394421774|gb|EJE95223.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli O111:H11 str. CVM9455]
gi|394429348|gb|EJF01781.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli O26:H11 str. CVM10030]
gi|394430253|gb|EJF02600.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli O26:H11 str. CVM9952]
gi|397782638|gb|EJK93506.1| dimethyladenosine transferase [Escherichia coli STEC_O31]
gi|397893419|gb|EJL09879.1| dimethyladenosine transferase [Shigella flexneri 6603-63]
gi|397903694|gb|EJL19989.1| dimethyladenosine transferase [Shigella sonnei str. Moseley]
gi|404342275|gb|EJZ68664.1| dimethyladenosine transferase [Shigella flexneri 1485-80]
gi|408206816|gb|EKI31582.1| dimethyladenosine transferase [Escherichia coli TW00353]
gi|408232845|gb|EKI56010.1| dimethyladenosine transferase [Escherichia coli N1]
gi|408311582|gb|EKJ28583.1| dimethyladenosine transferase [Escherichia coli EC1865]
gi|408348448|gb|EKJ62544.1| dimethyladenosine transferase [Escherichia coli 0.1288]
gi|408459678|gb|EKJ83459.1| dimethyladenosine transferase [Escherichia coli AD30]
gi|408574081|gb|EKK49876.1| dimethyladenosine transferase [Escherichia coli 8.0566]
gi|408574760|gb|EKK50519.1| dimethyladenosine transferase [Escherichia coli 8.0569]
gi|412961308|emb|CCK45213.1| S-adenosylmethionine-6-N [Escherichia coli chi7122]
gi|412967907|emb|CCJ42520.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Escherichia coli]
gi|421933515|gb|EKT91302.1| dimethyladenosine transferase [Escherichia coli O111:H8 str.
CFSAN001632]
gi|421937183|gb|EKT94801.1| dimethyladenosine transferase [Escherichia coli O111:H11 str.
CFSAN001630]
gi|421945196|gb|EKU02423.1| dimethyladenosine transferase [Escherichia coli O26:H11 str.
CFSAN001629]
gi|430889708|gb|ELC12368.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE10]
gi|430894281|gb|ELC16570.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE12]
gi|430923561|gb|ELC44296.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE21]
gi|430945191|gb|ELC65271.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE44]
gi|430975403|gb|ELC92298.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE193]
gi|431011519|gb|ELD25594.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE210]
gi|431014111|gb|ELD27820.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE213]
gi|431019923|gb|ELD33314.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE212]
gi|431058172|gb|ELD67581.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE233]
gi|431068154|gb|ELD76659.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE236]
gi|431086589|gb|ELD92611.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE237]
gi|431109725|gb|ELE13675.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE56]
gi|431153087|gb|ELE54006.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE76]
gi|431165966|gb|ELE66293.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE77]
gi|431175046|gb|ELE75077.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE81]
gi|431204144|gb|ELF02717.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE111]
gi|431208058|gb|ELF06281.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE142]
gi|431214826|gb|ELF12576.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE119]
gi|431225417|gb|ELF22617.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE143]
gi|431225853|gb|ELF23039.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE156]
gi|431232513|gb|ELF28179.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE161]
gi|431247999|gb|ELF42208.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE171]
gi|431267929|gb|ELF59444.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE9]
gi|431287790|gb|ELF78576.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE42]
gi|431342951|gb|ELG29921.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE78]
gi|431346467|gb|ELG33372.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE79]
gi|431351913|gb|ELG38699.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE91]
gi|431358306|gb|ELG44964.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE101]
gi|431380697|gb|ELG65336.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE135]
gi|431389256|gb|ELG72969.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE136]
gi|431393007|gb|ELG76576.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE140]
gi|431395372|gb|ELG78884.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE144]
gi|431405942|gb|ELG89174.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE147]
gi|431408601|gb|ELG91784.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE146]
gi|431415110|gb|ELG97660.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE154]
gi|431457327|gb|ELH37666.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE184]
gi|431473797|gb|ELH53630.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE197]
gi|431475559|gb|ELH55363.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE203]
gi|431561644|gb|ELI35009.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE112]
gi|431616177|gb|ELI85244.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE138]
gi|431652654|gb|ELJ19802.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE163]
gi|431664348|gb|ELJ31088.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE166]
gi|431697126|gb|ELJ62271.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE232]
gi|431723668|gb|ELJ87613.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE90]
gi|431727511|gb|ELJ91268.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE95]
gi|441653598|emb|CCQ03927.1| SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase [Escherichia coli O5:K4(L):H4 str.
ATCC 23502]
gi|443420576|gb|AGC85480.1| dimethyladenosine transferase [Escherichia coli APEC O78]
gi|449325923|gb|EMD15819.1| dimethyladenosine transferase [Escherichia coli S17]
gi|224747|prf||1112172A methyltransferase
Length = 273
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P HP+ D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V +L + P +R +SV ++
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VEVLTGMGIDPAMRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QMA 261
>gi|432600566|ref|ZP_19836822.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE66]
gi|431144605|gb|ELE46299.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE66]
Length = 273
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P HP+ D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V +L + P +R +SV ++
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VEVLTGMGIDPAMRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QMA 261
>gi|350530134|ref|ZP_08909075.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Vibrio rotiferianus DAT722]
Length = 270
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 57/119 (47%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G + RL++M Q +C V +P AF+P P+VD VV P HP DL
Sbjct: 147 LAAGPGSKAYGRLTVMAQYYCKVVPVLEVPPTAFVPPPKVDSAVVRLVPYEVLPHPAKDL 206
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+L+ERV F R+K V L L +LE V P +RP L++Q+F
Sbjct: 207 --RLLERVCREGFNQRRKTVRNCYKSL-------LSTEVLEELGVNPSMRPENLTLQQF 256
>gi|417710677|ref|ZP_12359687.1| dimethyladenosine transferase [Shigella flexneri K-272]
gi|417715339|ref|ZP_12364277.1| dimethyladenosine transferase [Shigella flexneri K-227]
gi|333011435|gb|EGK30849.1| dimethyladenosine transferase [Shigella flexneri K-272]
gi|333021674|gb|EGK40923.1| dimethyladenosine transferase [Shigella flexneri K-227]
Length = 273
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P HP+ D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V +L + P +R +SV ++
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VEVLTGMGIDPAMRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QMA 261
>gi|191169146|ref|ZP_03030905.1| dimethyladenosine transferase [Escherichia coli B7A]
gi|190900821|gb|EDV60611.1| dimethyladenosine transferase [Escherichia coli B7A]
Length = 273
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P HP+ D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V +L + P +R +SV ++
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VEVLTGMGIDPAMRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QMA 261
>gi|408373906|ref|ZP_11171598.1| ribosomal RNA adenine dimethylase [Alcanivorax hongdengensis
A-11-3]
gi|407766194|gb|EKF74639.1| ribosomal RNA adenine dimethylase [Alcanivorax hongdengensis
A-11-3]
Length = 270
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 56/132 (42%), Gaps = 12/132 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A+ G RLSIM Q C D+ F +P AF P P+VD VV P V P P K
Sbjct: 141 LTASPGTRDWGRLSIMVQYHCQADYLFFVPPGAFSPPPKVDSAVVRLIPHVSP--PYPAK 198
Query: 61 ---LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+ R+V+ F R+K + L + E + P LRP QL V E+
Sbjct: 199 DEAHLRRLVTQAFTQRRKAIRNGLKSLISAEQ-------FEALGIDPGLRPDQLGVAEYV 251
Query: 118 QICLAYRDMCEE 129
+ A E
Sbjct: 252 ALANASTPAAEN 263
>gi|375332502|pdb|3TPZ|A Chain A, 2.1 Angstrom Crystal Structure Of The L114p Mutant Of E.
Coli Ksga
gi|375332503|pdb|3TPZ|B Chain B, 2.1 Angstrom Crystal Structure Of The L114p Mutant Of E.
Coli Ksga
Length = 273
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P HP+ D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V +L + P +R +SV ++
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VEVLTGMGIDPAMRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QMA 261
>gi|163797528|ref|ZP_02191479.1| 16S rRNA dimethylase [alpha proteobacterium BAL199]
gi|159177277|gb|EDP61836.1| 16S rRNA dimethylase [alpha proteobacterium BAL199]
Length = 283
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 57/125 (45%), Gaps = 7/125 (5%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A G + RLS+ Q C V +P AF P P+V VV PR P+ +
Sbjct: 162 LLAAPGSDAYGRLSVFVQWLCTVRRVTDLPPSAFTPPPKVWSSVVRLEPRAEPLHPADRR 221
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
+ERV F R+K + + L +LL A ++P RP +LS+ EF ++
Sbjct: 222 TLERVTEAAFGQRRKMLRQSLKGLGGD-------ALLIAAGIEPTERPERLSIAEFCRLA 274
Query: 121 LAYRD 125
A D
Sbjct: 275 NALSD 279
>gi|86516089|gb|ABC97695.1| KsgA [Shigella flexneri]
gi|86516091|gb|ABC97696.1| KsgA [Shigella flexneri]
Length = 256
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P HP+ D+
Sbjct: 135 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDV 194
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V +L + P +R +SV ++
Sbjct: 195 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VEVLTGMGIDPAMRAENISVAQYC 245
Query: 118 QIC 120
Q+
Sbjct: 246 QMA 248
>gi|420345127|ref|ZP_14846562.1| dimethyladenosine transferase [Shigella boydii 965-58]
gi|425270755|ref|ZP_18662281.1| dimethyladenosine transferase [Escherichia coli TW15901]
gi|391276910|gb|EIQ35671.1| dimethyladenosine transferase [Shigella boydii 965-58]
gi|408200892|gb|EKI26067.1| dimethyladenosine transferase [Escherichia coli TW15901]
Length = 233
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P HP+ D+
Sbjct: 108 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDV 167
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V +L + P +R +SV ++
Sbjct: 168 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VEVLTGMGIDPAMRAENISVAQYC 218
Query: 118 QIC 120
Q+
Sbjct: 219 QMA 221
>gi|331661093|ref|ZP_08362025.1| dimethyladenosine transferase [Escherichia coli TA206]
gi|419912770|ref|ZP_14431217.1| dimethyladenosine transferase [Escherichia coli KD1]
gi|422369819|ref|ZP_16450215.1| dimethyladenosine transferase [Escherichia coli MS 16-3]
gi|432896723|ref|ZP_20107817.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE192]
gi|433027069|ref|ZP_20214950.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE109]
gi|315298429|gb|EFU57684.1| dimethyladenosine transferase [Escherichia coli MS 16-3]
gi|331052135|gb|EGI24174.1| dimethyladenosine transferase [Escherichia coli TA206]
gi|388390670|gb|EIL52146.1| dimethyladenosine transferase [Escherichia coli KD1]
gi|431430867|gb|ELH12646.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE192]
gi|431547251|gb|ELI21632.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE109]
Length = 273
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P HP+ D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHTTMPHPVKDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V +L + P +R +SV ++
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VEVLTGMGIDPAMRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QMA 261
>gi|424541633|ref|ZP_17984518.1| dimethyladenosine transferase [Escherichia coli EC4402]
gi|424572803|ref|ZP_18013274.1| dimethyladenosine transferase [Escherichia coli EC1845]
gi|425159865|ref|ZP_18559075.1| dimethyladenosine transferase [Escherichia coli FDA506]
gi|425177468|ref|ZP_18575555.1| dimethyladenosine transferase [Escherichia coli FRIK1999]
gi|425425776|ref|ZP_18806861.1| dimethyladenosine transferase [Escherichia coli 0.1304]
gi|390887498|gb|EIP47461.1| dimethyladenosine transferase [Escherichia coli EC4402]
gi|390926621|gb|EIP84180.1| dimethyladenosine transferase [Escherichia coli EC1845]
gi|408091893|gb|EKH25092.1| dimethyladenosine transferase [Escherichia coli FDA506]
gi|408111243|gb|EKH42994.1| dimethyladenosine transferase [Escherichia coli FRIK1999]
gi|408353576|gb|EKJ67071.1| dimethyladenosine transferase [Escherichia coli 0.1304]
Length = 233
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P HP+ D+
Sbjct: 108 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDV 167
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V +L + P +R +SV ++
Sbjct: 168 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VEVLTGMGIDPAMRAENISVAQYC 218
Query: 118 QIC 120
Q+
Sbjct: 219 QMA 221
>gi|26245977|ref|NP_752016.1| dimethyladenosine transferase [Escherichia coli CFT073]
gi|91209113|ref|YP_539099.1| dimethyladenosine transferase [Escherichia coli UTI89]
gi|110640266|ref|YP_667994.1| dimethyladenosine transferase [Escherichia coli 536]
gi|117622341|ref|YP_851254.1| dimethyladenosine transferase [Escherichia coli APEC O1]
gi|191174105|ref|ZP_03035619.1| dimethyladenosine transferase [Escherichia coli F11]
gi|215485215|ref|YP_002327646.1| dimethyladenosine transferase [Escherichia coli O127:H6 str.
E2348/69]
gi|218556992|ref|YP_002389905.1| dimethyladenosine transferase [Escherichia coli S88]
gi|227885048|ref|ZP_04002853.1| rRNA (adenine-N6,N6-)-dimethyltransferase [Escherichia coli 83972]
gi|237704197|ref|ZP_04534678.1| dimethyladenosine transferase [Escherichia sp. 3_2_53FAA]
gi|300981027|ref|ZP_07175304.1| dimethyladenosine transferase [Escherichia coli MS 45-1]
gi|300984194|ref|ZP_07176922.1| dimethyladenosine transferase [Escherichia coli MS 200-1]
gi|301048437|ref|ZP_07195464.1| dimethyladenosine transferase [Escherichia coli MS 185-1]
gi|306815349|ref|ZP_07449498.1| dimethyladenosine transferase [Escherichia coli NC101]
gi|312966174|ref|ZP_07780400.1| dimethyladenosine transferase [Escherichia coli 2362-75]
gi|331645161|ref|ZP_08346272.1| dimethyladenosine transferase [Escherichia coli M605]
gi|386597802|ref|YP_006099308.1| dimethyladenosine transferase [Escherichia coli IHE3034]
gi|386607143|ref|YP_006113443.1| dimethyladenosine transferase [Escherichia coli UM146]
gi|386627557|ref|YP_006147277.1| dimethyladenosine transferase [Escherichia coli str. 'clone D i2']
gi|386632477|ref|YP_006152196.1| dimethyladenosine transferase [Escherichia coli str. 'clone D i14']
gi|386637406|ref|YP_006104204.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Escherichia coli ABU 83972]
gi|387828111|ref|YP_003348048.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Escherichia coli SE15]
gi|416333829|ref|ZP_11670937.1| Dimethyladenosine transferase [Escherichia coli WV_060327]
gi|417287685|ref|ZP_12074971.1| dimethyladenosine transferase [Escherichia coli TW07793]
gi|417660685|ref|ZP_12310266.1| dimethyladenosine transferase [Escherichia coli AA86]
gi|417753864|ref|ZP_12401961.1| dimethyladenosine transferase [Escherichia coli DEC2B]
gi|418995078|ref|ZP_13542698.1| dimethyladenosine transferase [Escherichia coli DEC1A]
gi|419000204|ref|ZP_13547771.1| dimethyladenosine transferase [Escherichia coli DEC1B]
gi|419005764|ref|ZP_13553222.1| dimethyladenosine transferase [Escherichia coli DEC1C]
gi|419011596|ref|ZP_13558966.1| dimethyladenosine transferase [Escherichia coli DEC1D]
gi|419016531|ref|ZP_13563859.1| dimethyladenosine transferase [Escherichia coli DEC1E]
gi|419022126|ref|ZP_13569375.1| dimethyladenosine transferase [Escherichia coli DEC2A]
gi|419027018|ref|ZP_13574222.1| dimethyladenosine transferase [Escherichia coli DEC2C]
gi|419032959|ref|ZP_13580060.1| dimethyladenosine transferase [Escherichia coli DEC2D]
gi|419037800|ref|ZP_13584863.1| dimethyladenosine transferase [Escherichia coli DEC2E]
gi|419698975|ref|ZP_14226599.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli SCI-07]
gi|419942516|ref|ZP_14459118.1| dimethyladenosine transferase [Escherichia coli HM605]
gi|422361065|ref|ZP_16441693.1| dimethyladenosine transferase [Escherichia coli MS 110-3]
gi|422363864|ref|ZP_16444395.1| dimethyladenosine transferase [Escherichia coli MS 153-1]
gi|422376386|ref|ZP_16456637.1| dimethyladenosine transferase [Escherichia coli MS 60-1]
gi|422380390|ref|ZP_16460568.1| dimethyladenosine transferase [Escherichia coli MS 57-2]
gi|422756387|ref|ZP_16810210.1| dimethyladenosine transferase [Escherichia coli H263]
gi|422839965|ref|ZP_16887936.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
H397]
gi|425298224|ref|ZP_18688282.1| dimethyladenosine transferase [Escherichia coli 07798]
gi|432356411|ref|ZP_19599659.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE4]
gi|432365910|ref|ZP_19609045.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE5]
gi|432384608|ref|ZP_19627521.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE15]
gi|432385438|ref|ZP_19628340.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE16]
gi|432404932|ref|ZP_19647656.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE28]
gi|432430211|ref|ZP_19672661.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE187]
gi|432434597|ref|ZP_19677009.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE188]
gi|432439388|ref|ZP_19681754.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE189]
gi|432444511|ref|ZP_19686823.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE191]
gi|432454826|ref|ZP_19697038.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE201]
gi|432468974|ref|ZP_19711038.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE205]
gi|432469384|ref|ZP_19711440.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE206]
gi|432493877|ref|ZP_19735699.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE214]
gi|432498345|ref|ZP_19740126.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE216]
gi|432510281|ref|ZP_19749141.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE220]
gi|432512248|ref|ZP_19749495.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE224]
gi|432522190|ref|ZP_19759336.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE230]
gi|432566922|ref|ZP_19803454.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE53]
gi|432571945|ref|ZP_19808440.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE55]
gi|432581243|ref|ZP_19817662.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE57]
gi|432586381|ref|ZP_19822755.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE58]
gi|432591051|ref|ZP_19827385.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE60]
gi|432595951|ref|ZP_19832241.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE62]
gi|432605915|ref|ZP_19842115.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE67]
gi|432609758|ref|ZP_19845934.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE72]
gi|432644461|ref|ZP_19880268.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE86]
gi|432649418|ref|ZP_19885188.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE87]
gi|432654095|ref|ZP_19889817.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE93]
gi|432692729|ref|ZP_19927951.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE162]
gi|432697358|ref|ZP_19932534.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE169]
gi|432711738|ref|ZP_19946793.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE8]
gi|432730773|ref|ZP_19965634.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE45]
gi|432743977|ref|ZP_19978686.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE43]
gi|432757566|ref|ZP_19992101.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE22]
gi|432762323|ref|ZP_19996788.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE46]
gi|432776935|ref|ZP_20011192.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE59]
gi|432781936|ref|ZP_20016123.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE63]
gi|432790636|ref|ZP_20024757.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE65]
gi|432800369|ref|ZP_20034361.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE84]
gi|432819403|ref|ZP_20053118.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE118]
gi|432825531|ref|ZP_20059189.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE123]
gi|432842311|ref|ZP_20075740.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE141]
gi|432892621|ref|ZP_20104788.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE165]
gi|432902353|ref|ZP_20112101.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE194]
gi|432916964|ref|ZP_20121703.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE173]
gi|432924194|ref|ZP_20126613.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE175]
gi|432941747|ref|ZP_20139245.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE183]
gi|432970189|ref|ZP_20159071.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE207]
gi|432976754|ref|ZP_20165581.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE209]
gi|432979430|ref|ZP_20168220.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE211]
gi|432983775|ref|ZP_20172517.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE215]
gi|432993804|ref|ZP_20182426.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE218]
gi|432998221|ref|ZP_20186773.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE223]
gi|433003593|ref|ZP_20192032.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE227]
gi|433012227|ref|ZP_20200616.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE104]
gi|433026422|ref|ZP_20214376.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE106]
gi|433036978|ref|ZP_20224606.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE113]
gi|433056374|ref|ZP_20243476.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE124]
gi|433075900|ref|ZP_20262512.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE129]
gi|433076209|ref|ZP_20262790.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE131]
gi|433080957|ref|ZP_20267437.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE133]
gi|433085698|ref|ZP_20272110.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE137]
gi|433094925|ref|ZP_20281152.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE139]
gi|433099590|ref|ZP_20285712.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE145]
gi|433104228|ref|ZP_20290254.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE148]
gi|433113983|ref|ZP_20299809.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE153]
gi|433123212|ref|ZP_20308847.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE157]
gi|433123647|ref|ZP_20309247.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE160]
gi|433142262|ref|ZP_20327480.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE167]
gi|433142550|ref|ZP_20327736.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE168]
gi|433147465|ref|ZP_20332554.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE174]
gi|433152186|ref|ZP_20337162.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE176]
gi|433166769|ref|ZP_20351455.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE180]
gi|433186404|ref|ZP_20370612.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE85]
gi|433191374|ref|ZP_20375441.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE88]
gi|433196618|ref|ZP_20380559.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE94]
gi|433210698|ref|ZP_20394345.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE97]
gi|433210969|ref|ZP_20394594.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE99]
gi|433326511|ref|ZP_20403318.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli J96]
gi|442606998|ref|ZP_21021791.1| SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase [Escherichia coli Nissle 1917]
gi|33516938|sp|Q8FL96.1|RSMA_ECOL6 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|118600864|sp|Q0TLT6.1|RSMA_ECOL5 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|119365024|sp|Q1RGE6.1|RSMA_ECOUT RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|166221662|sp|A1A7A0.1|RSMA_ECOK1 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226732573|sp|B7MAH6.1|RSMA_ECO45 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|254807866|sp|B7UI99.1|RSMA_ECO27 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|26106374|gb|AAN78560.1|AE016755_60 Dimethyladenosine transferase [Escherichia coli CFT073]
gi|91070687|gb|ABE05568.1| dimethyladenosine transferase [Escherichia coli UTI89]
gi|110341858|gb|ABG68095.1| dimethyladenosine transferase [Escherichia coli 536]
gi|115511465|gb|ABI99539.1| dimethyladenosine transferase [Escherichia coli APEC O1]
gi|190905599|gb|EDV65224.1| dimethyladenosine transferase [Escherichia coli F11]
gi|215263287|emb|CAS07602.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Escherichia coli O127:H6 str. E2348/69]
gi|218363761|emb|CAR01422.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Escherichia coli S88]
gi|226902109|gb|EEH88368.1| dimethyladenosine transferase [Escherichia sp. 3_2_53FAA]
gi|227837877|gb|EEJ48343.1| rRNA (adenine-N6,N6-)-dimethyltransferase [Escherichia coli 83972]
gi|281177268|dbj|BAI53598.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Escherichia coli SE15]
gi|294493966|gb|ADE92722.1| dimethyladenosine transferase [Escherichia coli IHE3034]
gi|300299730|gb|EFJ56115.1| dimethyladenosine transferase [Escherichia coli MS 185-1]
gi|300306724|gb|EFJ61244.1| dimethyladenosine transferase [Escherichia coli MS 200-1]
gi|300409063|gb|EFJ92601.1| dimethyladenosine transferase [Escherichia coli MS 45-1]
gi|305851011|gb|EFM51466.1| dimethyladenosine transferase [Escherichia coli NC101]
gi|307551898|gb|ADN44673.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Escherichia coli ABU 83972]
gi|307629627|gb|ADN73931.1| dimethyladenosine transferase [Escherichia coli UM146]
gi|312289417|gb|EFR17311.1| dimethyladenosine transferase [Escherichia coli 2362-75]
gi|315285119|gb|EFU44564.1| dimethyladenosine transferase [Escherichia coli MS 110-3]
gi|315293372|gb|EFU52724.1| dimethyladenosine transferase [Escherichia coli MS 153-1]
gi|320197502|gb|EFW72116.1| Dimethyladenosine transferase [Escherichia coli WV_060327]
gi|323955249|gb|EGB51022.1| dimethyladenosine transferase [Escherichia coli H263]
gi|324008399|gb|EGB77618.1| dimethyladenosine transferase [Escherichia coli MS 57-2]
gi|324012309|gb|EGB81528.1| dimethyladenosine transferase [Escherichia coli MS 60-1]
gi|330909903|gb|EGH38413.1| dimethyladenosine transferase [Escherichia coli AA86]
gi|331045918|gb|EGI18037.1| dimethyladenosine transferase [Escherichia coli M605]
gi|355418456|gb|AER82653.1| dimethyladenosine transferase [Escherichia coli str. 'clone D i2']
gi|355423376|gb|AER87572.1| dimethyladenosine transferase [Escherichia coli str. 'clone D i14']
gi|371608449|gb|EHN97005.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
H397]
gi|377850445|gb|EHU15407.1| dimethyladenosine transferase [Escherichia coli DEC1A]
gi|377851505|gb|EHU16450.1| dimethyladenosine transferase [Escherichia coli DEC1C]
gi|377855132|gb|EHU20007.1| dimethyladenosine transferase [Escherichia coli DEC1B]
gi|377865130|gb|EHU29922.1| dimethyladenosine transferase [Escherichia coli DEC1D]
gi|377867738|gb|EHU32492.1| dimethyladenosine transferase [Escherichia coli DEC1E]
gi|377869209|gb|EHU33926.1| dimethyladenosine transferase [Escherichia coli DEC2A]
gi|377880794|gb|EHU45360.1| dimethyladenosine transferase [Escherichia coli DEC2B]
gi|377884890|gb|EHU49398.1| dimethyladenosine transferase [Escherichia coli DEC2D]
gi|377886254|gb|EHU50736.1| dimethyladenosine transferase [Escherichia coli DEC2C]
gi|377899308|gb|EHU63656.1| dimethyladenosine transferase [Escherichia coli DEC2E]
gi|380349859|gb|EIA38123.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli SCI-07]
gi|386248470|gb|EII94642.1| dimethyladenosine transferase [Escherichia coli TW07793]
gi|388422905|gb|EIL82455.1| dimethyladenosine transferase [Escherichia coli HM605]
gi|408222200|gb|EKI46103.1| dimethyladenosine transferase [Escherichia coli 07798]
gi|430880002|gb|ELC03323.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE4]
gi|430881017|gb|ELC04279.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE5]
gi|430901831|gb|ELC23727.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE15]
gi|430910966|gb|ELC32264.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE16]
gi|430933157|gb|ELC53568.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE28]
gi|430957517|gb|ELC76169.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE187]
gi|430968331|gb|ELC85558.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE188]
gi|430970100|gb|ELC87186.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE189]
gi|430976986|gb|ELC93838.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE191]
gi|430986759|gb|ELD03325.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE201]
gi|430988576|gb|ELD05069.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE205]
gi|431001362|gb|ELD16945.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE206]
gi|431029651|gb|ELD42682.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE214]
gi|431032424|gb|ELD45134.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE220]
gi|431032790|gb|ELD45496.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE216]
gi|431045378|gb|ELD55611.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE224]
gi|431055980|gb|ELD65510.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE230]
gi|431103501|gb|ELE08144.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE53]
gi|431112554|gb|ELE16244.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE55]
gi|431123383|gb|ELE26123.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE57]
gi|431124512|gb|ELE27152.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE58]
gi|431134233|gb|ELE36197.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE60]
gi|431134547|gb|ELE36496.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE62]
gi|431142183|gb|ELE43933.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE67]
gi|431152389|gb|ELE53340.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE72]
gi|431185465|gb|ELE85194.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE86]
gi|431194704|gb|ELE93919.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE87]
gi|431196143|gb|ELE95088.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE93]
gi|431238184|gb|ELF33123.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE162]
gi|431247547|gb|ELF41768.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE169]
gi|431260732|gb|ELF52827.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE8]
gi|431278787|gb|ELF69760.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE45]
gi|431296350|gb|ELF86062.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE43]
gi|431297833|gb|ELF87480.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE22]
gi|431302518|gb|ELF91698.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE46]
gi|431331795|gb|ELG19039.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE59]
gi|431332829|gb|ELG20050.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE63]
gi|431333648|gb|ELG20833.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE65]
gi|431352102|gb|ELG38886.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE84]
gi|431371162|gb|ELG56947.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE118]
gi|431375542|gb|ELG60882.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE123]
gi|431399087|gb|ELG82506.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE141]
gi|431426042|gb|ELH08087.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE165]
gi|431438482|gb|ELH19856.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE194]
gi|431448919|gb|ELH29631.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE173]
gi|431450683|gb|ELH31168.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE175]
gi|431456348|gb|ELH36692.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE183]
gi|431483712|gb|ELH63401.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE209]
gi|431487631|gb|ELH67275.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE207]
gi|431498968|gb|ELH78150.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE211]
gi|431507841|gb|ELH86123.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE215]
gi|431511787|gb|ELH89917.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE218]
gi|431516650|gb|ELH94255.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE223]
gi|431518544|gb|ELH95998.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE227]
gi|431527849|gb|ELI04563.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE106]
gi|431536796|gb|ELI12952.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE104]
gi|431557086|gb|ELI30860.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE113]
gi|431575670|gb|ELI48401.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE124]
gi|431579101|gb|ELI51686.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE129]
gi|431603709|gb|ELI73132.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE131]
gi|431607209|gb|ELI76579.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE133]
gi|431611326|gb|ELI80605.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE137]
gi|431620983|gb|ELI89805.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE139]
gi|431624407|gb|ELI93027.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE145]
gi|431634946|gb|ELJ03162.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE148]
gi|431636645|gb|ELJ04775.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE157]
gi|431637926|gb|ELJ05976.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE153]
gi|431651222|gb|ELJ18488.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE160]
gi|431653356|gb|ELJ20467.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE167]
gi|431667930|gb|ELJ34506.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE168]
gi|431679653|gb|ELJ45564.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE176]
gi|431679961|gb|ELJ45840.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE174]
gi|431695034|gb|ELJ60370.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE180]
gi|431698818|gb|ELJ63843.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE85]
gi|431699443|gb|ELJ64448.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE88]
gi|431726569|gb|ELJ90378.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE97]
gi|431727183|gb|ELJ90946.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE94]
gi|431736677|gb|ELK00002.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE99]
gi|432345467|gb|ELL39971.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli J96]
gi|441711747|emb|CCQ07768.1| SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase [Escherichia coli Nissle 1917]
Length = 273
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P HP+ D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V +L + P +R +SV ++
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VEVLTGMGIDPAMRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QMA 261
>gi|86516029|gb|ABC97665.1| KsgA [Shigella boydii]
Length = 256
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P HP+ D+
Sbjct: 135 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDV 194
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V +L + P +R +SV ++
Sbjct: 195 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VEVLTGMGIDPAMRAENISVAQYC 245
Query: 118 QIC 120
Q+
Sbjct: 246 QMA 248
>gi|300919604|ref|ZP_07136096.1| dimethyladenosine transferase [Escherichia coli MS 115-1]
gi|432532266|ref|ZP_19769276.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE234]
gi|300413350|gb|EFJ96660.1| dimethyladenosine transferase [Escherichia coli MS 115-1]
gi|431065291|gb|ELD74064.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE234]
Length = 273
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P HP+ D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V +L + P +R +SV ++
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VEVLTGMGIDPAMRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QMA 261
>gi|416895400|ref|ZP_11925301.1| dimethyladenosine transferase [Escherichia coli STEC_7v]
gi|417112218|ref|ZP_11964341.1| dimethyladenosine transferase [Escherichia coli 1.2741]
gi|422802630|ref|ZP_16851123.1| dimethyladenosine transferase [Escherichia coli M863]
gi|323964849|gb|EGB60316.1| dimethyladenosine transferase [Escherichia coli M863]
gi|327255031|gb|EGE66634.1| dimethyladenosine transferase [Escherichia coli STEC_7v]
gi|386143002|gb|EIG84138.1| dimethyladenosine transferase [Escherichia coli 1.2741]
Length = 273
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P HP+ D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V +L + P +R +SV ++
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VEVLTGMGIDPAMRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QMA 261
>gi|415837690|ref|ZP_11519702.1| dimethyladenosine transferase [Escherichia coli RN587/1]
gi|417284455|ref|ZP_12071750.1| dimethyladenosine transferase [Escherichia coli 3003]
gi|425275916|ref|ZP_18667273.1| dimethyladenosine transferase [Escherichia coli ARS4.2123]
gi|323190266|gb|EFZ75542.1| dimethyladenosine transferase [Escherichia coli RN587/1]
gi|386242664|gb|EII84399.1| dimethyladenosine transferase [Escherichia coli 3003]
gi|408207783|gb|EKI32493.1| dimethyladenosine transferase [Escherichia coli ARS4.2123]
Length = 273
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P HP+ D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHTTMPHPVKDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V +L + P +R +SV ++
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VEVLTGMGIDPAMRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QMA 261
>gi|50513341|pdb|1QYR|A Chain A, 2.1 Angstrom Crystal Structure Of Ksga: A Universally
Conserved Adenosine Dimethyltransferase
gi|50513342|pdb|1QYR|B Chain B, 2.1 Angstrom Crystal Structure Of Ksga: A Universally
Conserved Adenosine Dimethyltransferase
gi|375332733|pdb|4ADV|V Chain V, Structure Of The E. Coli Methyltransferase Ksga Bound To
The E. Coli 30s Ribosomal Subunit
Length = 252
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P HP+ D+
Sbjct: 132 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDV 191
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V +L + P +R +SV ++
Sbjct: 192 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VEVLTGMGIDPAMRAENISVAQYC 242
Query: 118 QIC 120
Q+
Sbjct: 243 QMA 245
>gi|419811578|ref|ZP_14336452.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli O32:H37 str. P4]
gi|385155622|gb|EIF17624.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli O32:H37 str. P4]
Length = 273
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P HP+ D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V +L + P +R +SV ++
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VEVLTGMGIDPAMRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QMA 261
>gi|417082267|ref|ZP_11950689.1| dimethyladenosine transferase [Escherichia coli cloneA_i1]
gi|355353551|gb|EHG02715.1| dimethyladenosine transferase [Escherichia coli cloneA_i1]
Length = 273
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P HP+ D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V +L + P +R +SV ++
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VEVLTGMGIDPAMRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QMA 261
>gi|420318527|ref|ZP_14820387.1| dimethyladenosine transferase [Shigella flexneri 2850-71]
gi|391255370|gb|EIQ14518.1| dimethyladenosine transferase [Shigella flexneri 2850-71]
Length = 233
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P HP+ D+
Sbjct: 108 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDV 167
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V +L + P +R +SV ++
Sbjct: 168 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VEVLTGIGIDPAMRAENISVAQYC 218
Query: 118 QIC 120
Q+
Sbjct: 219 QMA 221
>gi|222154880|ref|YP_002555019.1| Dimethyladenosine transferase [Escherichia coli LF82]
gi|387615398|ref|YP_006118420.1| dimethyladenosine transferase [Escherichia coli O83:H1 str. NRG
857C]
gi|222031885|emb|CAP74623.1| Dimethyladenosine transferase [Escherichia coli LF82]
gi|312944659|gb|ADR25486.1| dimethyladenosine transferase [Escherichia coli O83:H1 str. NRG
857C]
Length = 273
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P HP+ D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V +L + P +R +SV ++
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VEVLTGMGIDPAMRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QMA 261
>gi|432410052|ref|ZP_19652740.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE39]
gi|430939544|gb|ELC59760.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE39]
Length = 273
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P HP+ D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V +L + P +R +SV ++
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VEVLTGMGIDPAMRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QMA 261
>gi|422750558|ref|ZP_16804468.1| dimethyladenosine transferase [Escherichia coli H252]
gi|433010801|ref|ZP_20199206.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE229]
gi|433161834|ref|ZP_20346604.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE179]
gi|323950949|gb|EGB46826.1| dimethyladenosine transferase [Escherichia coli H252]
gi|431519013|gb|ELH96465.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE229]
gi|431693225|gb|ELJ58641.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE179]
Length = 273
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P HP+ D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V +L + P +R +SV ++
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VEVLTGMGIDPAMRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QMA 261
>gi|15799736|ref|NP_285748.1| dimethyladenosine transferase [Escherichia coli O157:H7 str.
EDL933]
gi|15829310|ref|NP_308083.1| dimethyladenosine transferase [Escherichia coli O157:H7 str. Sakai]
gi|168751689|ref|ZP_02776711.1| dimethyladenosine transferase [Escherichia coli O157:H7 str.
EC4113]
gi|168756882|ref|ZP_02781889.1| dimethyladenosine transferase [Escherichia coli O157:H7 str.
EC4401]
gi|168762818|ref|ZP_02787825.1| dimethyladenosine transferase [Escherichia coli O157:H7 str.
EC4501]
gi|168766746|ref|ZP_02791753.1| dimethyladenosine transferase [Escherichia coli O157:H7 str.
EC4486]
gi|168776974|ref|ZP_02801981.1| dimethyladenosine transferase [Escherichia coli O157:H7 str.
EC4196]
gi|168781755|ref|ZP_02806762.1| dimethyladenosine transferase [Escherichia coli O157:H7 str.
EC4076]
gi|168785109|ref|ZP_02810116.1| dimethyladenosine transferase [Escherichia coli O157:H7 str. EC869]
gi|168801939|ref|ZP_02826946.1| dimethyladenosine transferase [Escherichia coli O157:H7 str. EC508]
gi|195937727|ref|ZP_03083109.1| dimethyladenosine transferase [Escherichia coli O157:H7 str.
EC4024]
gi|208807925|ref|ZP_03250262.1| dimethyladenosine transferase [Escherichia coli O157:H7 str.
EC4206]
gi|208813755|ref|ZP_03255084.1| dimethyladenosine transferase [Escherichia coli O157:H7 str.
EC4045]
gi|208819017|ref|ZP_03259337.1| dimethyladenosine transferase [Escherichia coli O157:H7 str.
EC4042]
gi|209397383|ref|YP_002268661.1| dimethyladenosine transferase [Escherichia coli O157:H7 str.
EC4115]
gi|217326445|ref|ZP_03442529.1| dimethyladenosine transferase [Escherichia coli O157:H7 str.
TW14588]
gi|254791190|ref|YP_003076027.1| dimethyladenosine transferase [Escherichia coli O157:H7 str.
TW14359]
gi|261226811|ref|ZP_05941092.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Escherichia coli O157:H7 str. FRIK2000]
gi|261255214|ref|ZP_05947747.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Escherichia coli O157:H7 str. FRIK966]
gi|291280877|ref|YP_003497695.1| Dimethyladenosine transferase (S-adenosylmethionine-6-N,
N-adenosyl(rRNA) dimethyltransferase) [Escherichia coli
O55:H7 str. CB9615]
gi|387504986|ref|YP_006157242.1| KsgA/Dim1 family 16S ribosomal RNA methyltransferase [Escherichia
coli O55:H7 str. RM12579]
gi|387880613|ref|YP_006310915.1| dimethyladenosine transferase [Escherichia coli Xuzhou21]
gi|416309235|ref|ZP_11655688.1| Dimethyladenosine transferase [Escherichia coli O157:H7 str. 1044]
gi|416319070|ref|ZP_11661622.1| Dimethyladenosine transferase [Escherichia coli O157:H7 str.
EC1212]
gi|416325957|ref|ZP_11666281.1| Dimethyladenosine transferase [Escherichia coli O157:H7 str. 1125]
gi|416773269|ref|ZP_11873547.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli O157:H7 str. G5101]
gi|416784940|ref|ZP_11878416.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli O157:H- str. 493-89]
gi|416795712|ref|ZP_11883254.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli O157:H- str. H 2687]
gi|416807742|ref|ZP_11888081.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli O55:H7 str. 3256-97]
gi|416818890|ref|ZP_11892960.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli O55:H7 str. USDA 5905]
gi|416828226|ref|ZP_11897825.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli O157:H7 str. LSU-61]
gi|419048641|ref|ZP_13595566.1| dimethyladenosine transferase [Escherichia coli DEC3A]
gi|419054335|ref|ZP_13601198.1| dimethyladenosine transferase [Escherichia coli DEC3B]
gi|419054698|ref|ZP_13601559.1| dimethyladenosine transferase [Escherichia coli DEC3C]
gi|419060257|ref|ZP_13607045.1| dimethyladenosine transferase [Escherichia coli DEC3D]
gi|419066084|ref|ZP_13612775.1| dimethyladenosine transferase [Escherichia coli DEC3E]
gi|419073040|ref|ZP_13618616.1| dimethyladenosine transferase [Escherichia coli DEC3F]
gi|419083804|ref|ZP_13629241.1| dimethyladenosine transferase [Escherichia coli DEC4A]
gi|419089812|ref|ZP_13635156.1| dimethyladenosine transferase [Escherichia coli DEC4B]
gi|419095556|ref|ZP_13640825.1| dimethyladenosine transferase [Escherichia coli DEC4C]
gi|419101414|ref|ZP_13646595.1| dimethyladenosine transferase [Escherichia coli DEC4D]
gi|419107095|ref|ZP_13652208.1| dimethyladenosine transferase [Escherichia coli DEC4E]
gi|419112538|ref|ZP_13657583.1| dimethyladenosine transferase [Escherichia coli DEC4F]
gi|419112873|ref|ZP_13657909.1| dimethyladenosine transferase [Escherichia coli DEC5A]
gi|419118379|ref|ZP_13663367.1| dimethyladenosine transferase [Escherichia coli DEC5B]
gi|419123964|ref|ZP_13668874.1| dimethyladenosine transferase [Escherichia coli DEC5C]
gi|419129612|ref|ZP_13674471.1| dimethyladenosine transferase [Escherichia coli DEC5D]
gi|419140011|ref|ZP_13684795.1| dimethyladenosine transferase [Escherichia coli DEC5E]
gi|420267340|ref|ZP_14769751.1| dimethyladenosine transferase [Escherichia coli PA22]
gi|420273023|ref|ZP_14775358.1| dimethyladenosine transferase [Escherichia coli PA40]
gi|420283539|ref|ZP_14785764.1| dimethyladenosine transferase [Escherichia coli TW06591]
gi|420284319|ref|ZP_14786539.1| dimethyladenosine transferase [Escherichia coli TW10246]
gi|420290072|ref|ZP_14792241.1| dimethyladenosine transferase [Escherichia coli TW11039]
gi|420295794|ref|ZP_14797892.1| dimethyladenosine transferase [Escherichia coli TW09109]
gi|420301765|ref|ZP_14803800.1| dimethyladenosine transferase [Escherichia coli TW10119]
gi|420307210|ref|ZP_14809186.1| dimethyladenosine transferase [Escherichia coli EC1738]
gi|420312954|ref|ZP_14814869.1| dimethyladenosine transferase [Escherichia coli EC1734]
gi|421810196|ref|ZP_16246016.1| dimethyladenosine transferase [Escherichia coli 8.0416]
gi|421816268|ref|ZP_16251841.1| dimethyladenosine transferase [Escherichia coli 10.0821]
gi|421821661|ref|ZP_16257106.1| dimethyladenosine transferase [Escherichia coli FRIK920]
gi|421828414|ref|ZP_16263746.1| dimethyladenosine transferase [Escherichia coli PA7]
gi|423652414|ref|ZP_17627818.1| dimethyladenosine transferase [Escherichia coli PA31]
gi|424074813|ref|ZP_17812205.1| dimethyladenosine transferase [Escherichia coli FDA505]
gi|424081061|ref|ZP_17817968.1| dimethyladenosine transferase [Escherichia coli FDA517]
gi|424087738|ref|ZP_17824040.1| dimethyladenosine transferase [Escherichia coli FRIK1996]
gi|424093946|ref|ZP_17829760.1| dimethyladenosine transferase [Escherichia coli FRIK1985]
gi|424100360|ref|ZP_17835569.1| dimethyladenosine transferase [Escherichia coli FRIK1990]
gi|424107184|ref|ZP_17841805.1| dimethyladenosine transferase [Escherichia coli 93-001]
gi|424113159|ref|ZP_17847358.1| dimethyladenosine transferase [Escherichia coli PA3]
gi|424119288|ref|ZP_17853047.1| dimethyladenosine transferase [Escherichia coli PA5]
gi|424125505|ref|ZP_17858747.1| dimethyladenosine transferase [Escherichia coli PA9]
gi|424131510|ref|ZP_17864366.1| dimethyladenosine transferase [Escherichia coli PA10]
gi|424138124|ref|ZP_17870466.1| dimethyladenosine transferase [Escherichia coli PA14]
gi|424144578|ref|ZP_17876386.1| dimethyladenosine transferase [Escherichia coli PA15]
gi|424150724|ref|ZP_17882030.1| dimethyladenosine transferase [Escherichia coli PA24]
gi|424260076|ref|ZP_17893012.1| dimethyladenosine transferase [Escherichia coli PA25]
gi|424260762|ref|ZP_17893348.1| dimethyladenosine transferase [Escherichia coli PA28]
gi|424416998|ref|ZP_17899118.1| dimethyladenosine transferase [Escherichia coli PA32]
gi|424453123|ref|ZP_17904710.1| dimethyladenosine transferase [Escherichia coli PA33]
gi|424459398|ref|ZP_17910409.1| dimethyladenosine transferase [Escherichia coli PA39]
gi|424465862|ref|ZP_17916099.1| dimethyladenosine transferase [Escherichia coli PA41]
gi|424472464|ref|ZP_17922176.1| dimethyladenosine transferase [Escherichia coli PA42]
gi|424478433|ref|ZP_17927722.1| dimethyladenosine transferase [Escherichia coli TW07945]
gi|424484458|ref|ZP_17933377.1| dimethyladenosine transferase [Escherichia coli TW09098]
gi|424490547|ref|ZP_17939027.1| dimethyladenosine transferase [Escherichia coli TW09195]
gi|424497672|ref|ZP_17944995.1| dimethyladenosine transferase [Escherichia coli EC4203]
gi|424503918|ref|ZP_17950743.1| dimethyladenosine transferase [Escherichia coli EC4196]
gi|424510158|ref|ZP_17956464.1| dimethyladenosine transferase [Escherichia coli TW14313]
gi|424517740|ref|ZP_17962214.1| dimethyladenosine transferase [Escherichia coli TW14301]
gi|424523570|ref|ZP_17967637.1| dimethyladenosine transferase [Escherichia coli EC4421]
gi|424529775|ref|ZP_17973444.1| dimethyladenosine transferase [Escherichia coli EC4422]
gi|424535746|ref|ZP_17979054.1| dimethyladenosine transferase [Escherichia coli EC4013]
gi|424547959|ref|ZP_17990221.1| dimethyladenosine transferase [Escherichia coli EC4439]
gi|424554249|ref|ZP_17996017.1| dimethyladenosine transferase [Escherichia coli EC4436]
gi|424560596|ref|ZP_18001922.1| dimethyladenosine transferase [Escherichia coli EC4437]
gi|424566604|ref|ZP_18007570.1| dimethyladenosine transferase [Escherichia coli EC4448]
gi|424584632|ref|ZP_18024252.1| dimethyladenosine transferase [Escherichia coli EC1863]
gi|425095444|ref|ZP_18498504.1| dimethyladenosine transferase [Escherichia coli 3.4870]
gi|425101529|ref|ZP_18504217.1| dimethyladenosine transferase [Escherichia coli 5.2239]
gi|425123198|ref|ZP_18524813.1| dimethyladenosine transferase [Escherichia coli 8.0586]
gi|425129223|ref|ZP_18530366.1| dimethyladenosine transferase [Escherichia coli 8.2524]
gi|425135566|ref|ZP_18536335.1| dimethyladenosine transferase [Escherichia coli 10.0833]
gi|425147355|ref|ZP_18547319.1| dimethyladenosine transferase [Escherichia coli 10.0869]
gi|425153403|ref|ZP_18552990.1| dimethyladenosine transferase [Escherichia coli PA34]
gi|425165380|ref|ZP_18564223.1| dimethyladenosine transferase [Escherichia coli FDA507]
gi|425171666|ref|ZP_18570103.1| dimethyladenosine transferase [Escherichia coli FDA504]
gi|425183692|ref|ZP_18581352.1| dimethyladenosine transferase [Escherichia coli FRIK1997]
gi|425190426|ref|ZP_18587585.1| dimethyladenosine transferase [Escherichia coli NE1487]
gi|425196723|ref|ZP_18593415.1| dimethyladenosine transferase [Escherichia coli NE037]
gi|425203421|ref|ZP_18599583.1| dimethyladenosine transferase [Escherichia coli FRIK2001]
gi|425209194|ref|ZP_18604966.1| dimethyladenosine transferase [Escherichia coli PA4]
gi|425221292|ref|ZP_18616232.1| dimethyladenosine transferase [Escherichia coli PA23]
gi|425221798|ref|ZP_18616693.1| dimethyladenosine transferase [Escherichia coli PA49]
gi|425228052|ref|ZP_18622484.1| dimethyladenosine transferase [Escherichia coli PA45]
gi|425234350|ref|ZP_18628344.1| dimethyladenosine transferase [Escherichia coli TT12B]
gi|425240325|ref|ZP_18633995.1| dimethyladenosine transferase [Escherichia coli MA6]
gi|425246405|ref|ZP_18639644.1| dimethyladenosine transferase [Escherichia coli 5905]
gi|425252192|ref|ZP_18645111.1| dimethyladenosine transferase [Escherichia coli CB7326]
gi|425264511|ref|ZP_18656470.1| dimethyladenosine transferase [Escherichia coli EC96038]
gi|425264647|ref|ZP_18656603.1| dimethyladenosine transferase [Escherichia coli 5412]
gi|425292023|ref|ZP_18682662.1| dimethyladenosine transferase [Escherichia coli PA38]
gi|425308806|ref|ZP_18698318.1| dimethyladenosine transferase [Escherichia coli EC1735]
gi|425314734|ref|ZP_18703852.1| dimethyladenosine transferase [Escherichia coli EC1736]
gi|425320809|ref|ZP_18709530.1| dimethyladenosine transferase [Escherichia coli EC1737]
gi|425326972|ref|ZP_18715244.1| dimethyladenosine transferase [Escherichia coli EC1846]
gi|425333160|ref|ZP_18720929.1| dimethyladenosine transferase [Escherichia coli EC1847]
gi|425339580|ref|ZP_18726861.1| dimethyladenosine transferase [Escherichia coli EC1848]
gi|425345457|ref|ZP_18732305.1| dimethyladenosine transferase [Escherichia coli EC1849]
gi|425351672|ref|ZP_18738093.1| dimethyladenosine transferase [Escherichia coli EC1850]
gi|425357658|ref|ZP_18743672.1| dimethyladenosine transferase [Escherichia coli EC1856]
gi|425363771|ref|ZP_18749374.1| dimethyladenosine transferase [Escherichia coli EC1862]
gi|425370205|ref|ZP_18755211.1| dimethyladenosine transferase [Escherichia coli EC1864]
gi|425389059|ref|ZP_18772593.1| dimethyladenosine transferase [Escherichia coli EC1866]
gi|425389700|ref|ZP_18773195.1| dimethyladenosine transferase [Escherichia coli EC1868]
gi|425395825|ref|ZP_18778905.1| dimethyladenosine transferase [Escherichia coli EC1869]
gi|425407981|ref|ZP_18790173.1| dimethyladenosine transferase [Escherichia coli EC1870]
gi|425408357|ref|ZP_18790546.1| dimethyladenosine transferase [Escherichia coli NE098]
gi|425414626|ref|ZP_18796297.1| dimethyladenosine transferase [Escherichia coli FRIK523]
gi|428944408|ref|ZP_19017100.1| dimethyladenosine transferase [Escherichia coli 88.1467]
gi|428950582|ref|ZP_19022763.1| dimethyladenosine transferase [Escherichia coli 88.1042]
gi|428956428|ref|ZP_19028176.1| dimethyladenosine transferase [Escherichia coli 89.0511]
gi|428962795|ref|ZP_19034016.1| dimethyladenosine transferase [Escherichia coli 90.0091]
gi|428974642|ref|ZP_19044924.1| dimethyladenosine transferase [Escherichia coli 90.0039]
gi|428975523|ref|ZP_19045734.1| dimethyladenosine transferase [Escherichia coli 90.2281]
gi|428981106|ref|ZP_19050877.1| dimethyladenosine transferase [Escherichia coli 93.0055]
gi|428987383|ref|ZP_19056710.1| dimethyladenosine transferase [Escherichia coli 93.0056]
gi|428993194|ref|ZP_19062138.1| dimethyladenosine transferase [Escherichia coli 94.0618]
gi|428999286|ref|ZP_19067836.1| dimethyladenosine transferase [Escherichia coli 95.0183]
gi|429005521|ref|ZP_19073492.1| dimethyladenosine transferase [Escherichia coli 95.1288]
gi|429011884|ref|ZP_19079173.1| dimethyladenosine transferase [Escherichia coli 95.0943]
gi|429018074|ref|ZP_19084891.1| dimethyladenosine transferase [Escherichia coli 96.0428]
gi|429030070|ref|ZP_19095979.1| dimethyladenosine transferase [Escherichia coli 96.0939]
gi|429036222|ref|ZP_19101702.1| dimethyladenosine transferase [Escherichia coli 96.0932]
gi|429042355|ref|ZP_19107393.1| dimethyladenosine transferase [Escherichia coli 96.0107]
gi|429048026|ref|ZP_19112694.1| dimethyladenosine transferase [Escherichia coli 97.0003]
gi|429053394|ref|ZP_19117915.1| dimethyladenosine transferase [Escherichia coli 97.1742]
gi|429059085|ref|ZP_19123257.1| dimethyladenosine transferase [Escherichia coli 97.0007]
gi|429064471|ref|ZP_19128371.1| dimethyladenosine transferase [Escherichia coli 99.0672]
gi|429071090|ref|ZP_19134458.1| dimethyladenosine transferase [Escherichia coli 99.0678]
gi|429076320|ref|ZP_19139550.1| dimethyladenosine transferase [Escherichia coli 99.0713]
gi|429823532|ref|ZP_19355089.1| dimethyladenosine transferase [Escherichia coli 96.0109]
gi|429829902|ref|ZP_19360821.1| dimethyladenosine transferase [Escherichia coli 97.0010]
gi|444922245|ref|ZP_21242010.1| dimethyladenosine transferase [Escherichia coli 09BKT078844]
gi|444928566|ref|ZP_21247738.1| dimethyladenosine transferase [Escherichia coli 99.0814]
gi|444933966|ref|ZP_21252931.1| dimethyladenosine transferase [Escherichia coli 99.0815]
gi|444939534|ref|ZP_21258204.1| dimethyladenosine transferase [Escherichia coli 99.0816]
gi|444945222|ref|ZP_21263660.1| dimethyladenosine transferase [Escherichia coli 99.0839]
gi|444950658|ref|ZP_21268902.1| dimethyladenosine transferase [Escherichia coli 99.0848]
gi|444956130|ref|ZP_21274155.1| dimethyladenosine transferase [Escherichia coli 99.1753]
gi|444961422|ref|ZP_21279200.1| dimethyladenosine transferase [Escherichia coli 99.1775]
gi|444967192|ref|ZP_21284678.1| dimethyladenosine transferase [Escherichia coli 99.1793]
gi|444972696|ref|ZP_21290001.1| dimethyladenosine transferase [Escherichia coli 99.1805]
gi|444978209|ref|ZP_21295217.1| dimethyladenosine transferase [Escherichia coli ATCC 700728]
gi|444983529|ref|ZP_21300405.1| dimethyladenosine transferase [Escherichia coli PA11]
gi|444988773|ref|ZP_21305524.1| dimethyladenosine transferase [Escherichia coli PA19]
gi|444999598|ref|ZP_21316073.1| dimethyladenosine transferase [Escherichia coli PA2]
gi|445005060|ref|ZP_21321414.1| dimethyladenosine transferase [Escherichia coli PA47]
gi|445015364|ref|ZP_21331447.1| dimethyladenosine transferase [Escherichia coli PA48]
gi|445016003|ref|ZP_21332064.1| dimethyladenosine transferase [Escherichia coli PA8]
gi|445021475|ref|ZP_21337409.1| dimethyladenosine transferase [Escherichia coli 7.1982]
gi|445026716|ref|ZP_21342505.1| dimethyladenosine transferase [Escherichia coli 99.1781]
gi|445037886|ref|ZP_21353369.1| dimethyladenosine transferase [Escherichia coli PA35]
gi|445048711|ref|ZP_21363894.1| dimethyladenosine transferase [Escherichia coli 95.0083]
gi|445054329|ref|ZP_21369291.1| dimethyladenosine transferase [Escherichia coli 99.0670]
gi|452970098|ref|ZP_21968325.1| 16S ribosomal RNA methyltransferase [Escherichia coli O157:H7 str.
EC4009]
gi|27151579|sp|Q8XA14.1|RSMA_ECO57 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226732574|sp|B5YZ89.1|RSMA_ECO5E RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|12512746|gb|AAG54356.1|AE005182_5 S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Escherichia coli O157:H7 str. EDL933]
gi|13359512|dbj|BAB33479.1| dimethyladenosine transferase [Escherichia coli O157:H7 str. Sakai]
gi|187767719|gb|EDU31563.1| dimethyladenosine transferase [Escherichia coli O157:H7 str.
EC4196]
gi|188014303|gb|EDU52425.1| dimethyladenosine transferase [Escherichia coli O157:H7 str.
EC4113]
gi|189000721|gb|EDU69707.1| dimethyladenosine transferase [Escherichia coli O157:H7 str.
EC4076]
gi|189356082|gb|EDU74501.1| dimethyladenosine transferase [Escherichia coli O157:H7 str.
EC4401]
gi|189364097|gb|EDU82516.1| dimethyladenosine transferase [Escherichia coli O157:H7 str.
EC4486]
gi|189366989|gb|EDU85405.1| dimethyladenosine transferase [Escherichia coli O157:H7 str.
EC4501]
gi|189374734|gb|EDU93150.1| dimethyladenosine transferase [Escherichia coli O157:H7 str. EC869]
gi|189375991|gb|EDU94407.1| dimethyladenosine transferase [Escherichia coli O157:H7 str. EC508]
gi|208727726|gb|EDZ77327.1| dimethyladenosine transferase [Escherichia coli O157:H7 str.
EC4206]
gi|208735032|gb|EDZ83719.1| dimethyladenosine transferase [Escherichia coli O157:H7 str.
EC4045]
gi|208739140|gb|EDZ86822.1| dimethyladenosine transferase [Escherichia coli O157:H7 str.
EC4042]
gi|209158783|gb|ACI36216.1| dimethyladenosine transferase [Escherichia coli O157:H7 str.
EC4115]
gi|209746894|gb|ACI71754.1| dimethyladenosine transferase [Escherichia coli]
gi|209746896|gb|ACI71755.1| dimethyladenosine transferase [Escherichia coli]
gi|209746898|gb|ACI71756.1| dimethyladenosine transferase [Escherichia coli]
gi|209746900|gb|ACI71757.1| dimethyladenosine transferase [Escherichia coli]
gi|209746902|gb|ACI71758.1| dimethyladenosine transferase [Escherichia coli]
gi|217322666|gb|EEC31090.1| dimethyladenosine transferase [Escherichia coli O157:H7 str.
TW14588]
gi|254590590|gb|ACT69951.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Escherichia coli O157:H7 str. TW14359]
gi|290760750|gb|ADD54711.1| Dimethyladenosine transferase (S-adenosylmethionine-6-N,
N-adenosyl(rRNA) dimethyltransferase) [Escherichia coli
O55:H7 str. CB9615]
gi|320190426|gb|EFW65076.1| Dimethyladenosine transferase [Escherichia coli O157:H7 str.
EC1212]
gi|320642093|gb|EFX11444.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli O157:H7 str. G5101]
gi|320647456|gb|EFX16251.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli O157:H- str. 493-89]
gi|320652790|gb|EFX21028.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli O157:H- str. H 2687]
gi|320658179|gb|EFX25908.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli O55:H7 str. 3256-97 TW 07815]
gi|320663488|gb|EFX30772.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli O55:H7 str. USDA 5905]
gi|320668800|gb|EFX35595.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli O157:H7 str. LSU-61]
gi|326345229|gb|EGD68972.1| Dimethyladenosine transferase [Escherichia coli O157:H7 str. 1125]
gi|326346918|gb|EGD70652.1| Dimethyladenosine transferase [Escherichia coli O157:H7 str. 1044]
gi|374356980|gb|AEZ38687.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli O55:H7 str. RM12579]
gi|377887662|gb|EHU52139.1| dimethyladenosine transferase [Escherichia coli DEC3A]
gi|377888725|gb|EHU53196.1| dimethyladenosine transferase [Escherichia coli DEC3B]
gi|377915325|gb|EHU79434.1| dimethyladenosine transferase [Escherichia coli DEC3C]
gi|377919606|gb|EHU83644.1| dimethyladenosine transferase [Escherichia coli DEC3D]
gi|377921788|gb|EHU85783.1| dimethyladenosine transferase [Escherichia coli DEC3E]
gi|377922238|gb|EHU86230.1| dimethyladenosine transferase [Escherichia coli DEC4A]
gi|377925736|gb|EHU89676.1| dimethyladenosine transferase [Escherichia coli DEC4B]
gi|377933615|gb|EHU97459.1| dimethyladenosine transferase [Escherichia coli DEC3F]
gi|377935970|gb|EHU99764.1| dimethyladenosine transferase [Escherichia coli DEC4D]
gi|377936403|gb|EHV00197.1| dimethyladenosine transferase [Escherichia coli DEC4C]
gi|377942576|gb|EHV06310.1| dimethyladenosine transferase [Escherichia coli DEC4E]
gi|377953164|gb|EHV16745.1| dimethyladenosine transferase [Escherichia coli DEC4F]
gi|377966726|gb|EHV30136.1| dimethyladenosine transferase [Escherichia coli DEC5A]
gi|377974610|gb|EHV37937.1| dimethyladenosine transferase [Escherichia coli DEC5B]
gi|377978809|gb|EHV42088.1| dimethyladenosine transferase [Escherichia coli DEC5E]
gi|377983516|gb|EHV46760.1| dimethyladenosine transferase [Escherichia coli DEC5D]
gi|377983683|gb|EHV46925.1| dimethyladenosine transferase [Escherichia coli DEC5C]
gi|386794071|gb|AFJ27105.1| dimethyladenosine transferase [Escherichia coli Xuzhou21]
gi|390651608|gb|EIN29879.1| dimethyladenosine transferase [Escherichia coli FRIK1996]
gi|390654126|gb|EIN32179.1| dimethyladenosine transferase [Escherichia coli FDA517]
gi|390654422|gb|EIN32468.1| dimethyladenosine transferase [Escherichia coli FDA505]
gi|390670882|gb|EIN47370.1| dimethyladenosine transferase [Escherichia coli 93-001]
gi|390674805|gb|EIN50970.1| dimethyladenosine transferase [Escherichia coli FRIK1990]
gi|390676421|gb|EIN52521.1| dimethyladenosine transferase [Escherichia coli FRIK1985]
gi|390689922|gb|EIN64824.1| dimethyladenosine transferase [Escherichia coli PA3]
gi|390693717|gb|EIN68334.1| dimethyladenosine transferase [Escherichia coli PA9]
gi|390694679|gb|EIN69237.1| dimethyladenosine transferase [Escherichia coli PA5]
gi|390709694|gb|EIN82772.1| dimethyladenosine transferase [Escherichia coli PA10]
gi|390711963|gb|EIN84921.1| dimethyladenosine transferase [Escherichia coli PA15]
gi|390715076|gb|EIN87943.1| dimethyladenosine transferase [Escherichia coli PA14]
gi|390716695|gb|EIN89490.1| dimethyladenosine transferase [Escherichia coli PA25]
gi|390721729|gb|EIN94423.1| dimethyladenosine transferase [Escherichia coli PA22]
gi|390734979|gb|EIO06408.1| dimethyladenosine transferase [Escherichia coli PA24]
gi|390738197|gb|EIO09415.1| dimethyladenosine transferase [Escherichia coli PA28]
gi|390753329|gb|EIO23052.1| dimethyladenosine transferase [Escherichia coli PA31]
gi|390753578|gb|EIO23255.1| dimethyladenosine transferase [Escherichia coli PA32]
gi|390758054|gb|EIO27522.1| dimethyladenosine transferase [Escherichia coli PA33]
gi|390763312|gb|EIO32561.1| dimethyladenosine transferase [Escherichia coli PA40]
gi|390777190|gb|EIO45034.1| dimethyladenosine transferase [Escherichia coli PA41]
gi|390778206|gb|EIO45964.1| dimethyladenosine transferase [Escherichia coli TW06591]
gi|390781228|gb|EIO48912.1| dimethyladenosine transferase [Escherichia coli PA42]
gi|390789318|gb|EIO56782.1| dimethyladenosine transferase [Escherichia coli PA39]
gi|390796107|gb|EIO63383.1| dimethyladenosine transferase [Escherichia coli TW10246]
gi|390802798|gb|EIO69827.1| dimethyladenosine transferase [Escherichia coli TW11039]
gi|390812251|gb|EIO78934.1| dimethyladenosine transferase [Escherichia coli TW07945]
gi|390812592|gb|EIO79268.1| dimethyladenosine transferase [Escherichia coli TW09109]
gi|390820358|gb|EIO86664.1| dimethyladenosine transferase [Escherichia coli TW10119]
gi|390824910|gb|EIO90859.1| dimethyladenosine transferase [Escherichia coli TW09098]
gi|390837955|gb|EIP02273.1| dimethyladenosine transferase [Escherichia coli EC4203]
gi|390841176|gb|EIP05147.1| dimethyladenosine transferase [Escherichia coli EC4196]
gi|390845444|gb|EIP09101.1| dimethyladenosine transferase [Escherichia coli TW09195]
gi|390856725|gb|EIP19296.1| dimethyladenosine transferase [Escherichia coli TW14301]
gi|390861497|gb|EIP23745.1| dimethyladenosine transferase [Escherichia coli EC4421]
gi|390862909|gb|EIP25074.1| dimethyladenosine transferase [Escherichia coli TW14313]
gi|390872474|gb|EIP33763.1| dimethyladenosine transferase [Escherichia coli EC4422]
gi|390877684|gb|EIP38579.1| dimethyladenosine transferase [Escherichia coli EC4013]
gi|390888948|gb|EIP48730.1| dimethyladenosine transferase [Escherichia coli EC4439]
gi|390896459|gb|EIP55849.1| dimethyladenosine transferase [Escherichia coli EC4436]
gi|390904316|gb|EIP63312.1| dimethyladenosine transferase [Escherichia coli EC1738]
gi|390912416|gb|EIP71068.1| dimethyladenosine transferase [Escherichia coli EC4437]
gi|390912806|gb|EIP71452.1| dimethyladenosine transferase [Escherichia coli EC1734]
gi|390914175|gb|EIP72719.1| dimethyladenosine transferase [Escherichia coli EC1863]
gi|390917613|gb|EIP76030.1| dimethyladenosine transferase [Escherichia coli EC4448]
gi|408073540|gb|EKH07849.1| dimethyladenosine transferase [Escherichia coli PA7]
gi|408077275|gb|EKH11483.1| dimethyladenosine transferase [Escherichia coli FRIK920]
gi|408087288|gb|EKH20737.1| dimethyladenosine transferase [Escherichia coli PA34]
gi|408097633|gb|EKH30516.1| dimethyladenosine transferase [Escherichia coli FDA507]
gi|408103814|gb|EKH36143.1| dimethyladenosine transferase [Escherichia coli FDA504]
gi|408117350|gb|EKH48535.1| dimethyladenosine transferase [Escherichia coli FRIK1997]
gi|408123047|gb|EKH53849.1| dimethyladenosine transferase [Escherichia coli NE1487]
gi|408131507|gb|EKH61549.1| dimethyladenosine transferase [Escherichia coli NE037]
gi|408132966|gb|EKH62883.1| dimethyladenosine transferase [Escherichia coli FRIK2001]
gi|408133970|gb|EKH63823.1| dimethyladenosine transferase [Escherichia coli PA23]
gi|408142185|gb|EKH71566.1| dimethyladenosine transferase [Escherichia coli PA4]
gi|408154643|gb|EKH82974.1| dimethyladenosine transferase [Escherichia coli PA49]
gi|408159676|gb|EKH87728.1| dimethyladenosine transferase [Escherichia coli PA45]
gi|408167938|gb|EKH95391.1| dimethyladenosine transferase [Escherichia coli TT12B]
gi|408174040|gb|EKI01036.1| dimethyladenosine transferase [Escherichia coli MA6]
gi|408175599|gb|EKI02497.1| dimethyladenosine transferase [Escherichia coli 5905]
gi|408175752|gb|EKI02645.1| dimethyladenosine transferase [Escherichia coli EC96038]
gi|408187911|gb|EKI13800.1| dimethyladenosine transferase [Escherichia coli CB7326]
gi|408193649|gb|EKI19167.1| dimethyladenosine transferase [Escherichia coli 5412]
gi|408234583|gb|EKI57593.1| dimethyladenosine transferase [Escherichia coli PA38]
gi|408240934|gb|EKI63585.1| dimethyladenosine transferase [Escherichia coli EC1735]
gi|408250436|gb|EKI72296.1| dimethyladenosine transferase [Escherichia coli EC1736]
gi|408254727|gb|EKI76225.1| dimethyladenosine transferase [Escherichia coli EC1737]
gi|408260838|gb|EKI81887.1| dimethyladenosine transferase [Escherichia coli EC1846]
gi|408269447|gb|EKI89692.1| dimethyladenosine transferase [Escherichia coli EC1847]
gi|408271361|gb|EKI91488.1| dimethyladenosine transferase [Escherichia coli EC1848]
gi|408280321|gb|EKI99873.1| dimethyladenosine transferase [Escherichia coli EC1849]
gi|408286240|gb|EKJ05168.1| dimethyladenosine transferase [Escherichia coli EC1850]
gi|408289464|gb|EKJ08222.1| dimethyladenosine transferase [Escherichia coli EC1856]
gi|408301909|gb|EKJ19466.1| dimethyladenosine transferase [Escherichia coli EC1862]
gi|408302173|gb|EKJ19708.1| dimethyladenosine transferase [Escherichia coli EC1864]
gi|408303167|gb|EKJ20633.1| dimethyladenosine transferase [Escherichia coli EC1866]
gi|408319757|gb|EKJ35876.1| dimethyladenosine transferase [Escherichia coli EC1868]
gi|408320166|gb|EKJ36269.1| dimethyladenosine transferase [Escherichia coli EC1870]
gi|408332407|gb|EKJ47442.1| dimethyladenosine transferase [Escherichia coli EC1869]
gi|408338281|gb|EKJ52929.1| dimethyladenosine transferase [Escherichia coli NE098]
gi|408351136|gb|EKJ64927.1| dimethyladenosine transferase [Escherichia coli FRIK523]
gi|408560625|gb|EKK36888.1| dimethyladenosine transferase [Escherichia coli 5.2239]
gi|408561059|gb|EKK37303.1| dimethyladenosine transferase [Escherichia coli 3.4870]
gi|408586118|gb|EKK60901.1| dimethyladenosine transferase [Escherichia coli 8.0586]
gi|408587334|gb|EKK61990.1| dimethyladenosine transferase [Escherichia coli 10.0869]
gi|408592049|gb|EKK66442.1| dimethyladenosine transferase [Escherichia coli 8.2524]
gi|408593801|gb|EKK68109.1| dimethyladenosine transferase [Escherichia coli 10.0833]
gi|408606262|gb|EKK79709.1| dimethyladenosine transferase [Escherichia coli 8.0416]
gi|408618262|gb|EKK91349.1| dimethyladenosine transferase [Escherichia coli 10.0821]
gi|427215756|gb|EKV84922.1| dimethyladenosine transferase [Escherichia coli 88.1042]
gi|427219197|gb|EKV88166.1| dimethyladenosine transferase [Escherichia coli 89.0511]
gi|427219447|gb|EKV88409.1| dimethyladenosine transferase [Escherichia coli 88.1467]
gi|427222740|gb|EKV91504.1| dimethyladenosine transferase [Escherichia coli 90.0039]
gi|427235494|gb|EKW03115.1| dimethyladenosine transferase [Escherichia coli 90.2281]
gi|427237902|gb|EKW05424.1| dimethyladenosine transferase [Escherichia coli 90.0091]
gi|427252282|gb|EKW18771.1| dimethyladenosine transferase [Escherichia coli 93.0056]
gi|427254126|gb|EKW20494.1| dimethyladenosine transferase [Escherichia coli 93.0055]
gi|427255163|gb|EKW21434.1| dimethyladenosine transferase [Escherichia coli 94.0618]
gi|427271629|gb|EKW36420.1| dimethyladenosine transferase [Escherichia coli 95.0943]
gi|427272180|gb|EKW36933.1| dimethyladenosine transferase [Escherichia coli 95.0183]
gi|427279012|gb|EKW43464.1| dimethyladenosine transferase [Escherichia coli 95.1288]
gi|427287357|gb|EKW51119.1| dimethyladenosine transferase [Escherichia coli 96.0428]
gi|427294889|gb|EKW58043.1| dimethyladenosine transferase [Escherichia coli 96.0939]
gi|427305587|gb|EKW68181.1| dimethyladenosine transferase [Escherichia coli 97.0003]
gi|427307998|gb|EKW70417.1| dimethyladenosine transferase [Escherichia coli 96.0932]
gi|427312409|gb|EKW74565.1| dimethyladenosine transferase [Escherichia coli 96.0107]
gi|427323152|gb|EKW84755.1| dimethyladenosine transferase [Escherichia coli 97.1742]
gi|427323689|gb|EKW85243.1| dimethyladenosine transferase [Escherichia coli 97.0007]
gi|427335395|gb|EKW96425.1| dimethyladenosine transferase [Escherichia coli 99.0713]
gi|427335796|gb|EKW96825.1| dimethyladenosine transferase [Escherichia coli 99.0678]
gi|427337254|gb|EKW98172.1| dimethyladenosine transferase [Escherichia coli 99.0672]
gi|429260735|gb|EKY44266.1| dimethyladenosine transferase [Escherichia coli 96.0109]
gi|429262399|gb|EKY45740.1| dimethyladenosine transferase [Escherichia coli 97.0010]
gi|444543376|gb|ELV22638.1| dimethyladenosine transferase [Escherichia coli 99.0814]
gi|444552369|gb|ELV30207.1| dimethyladenosine transferase [Escherichia coli 09BKT078844]
gi|444552652|gb|ELV30430.1| dimethyladenosine transferase [Escherichia coli 99.0815]
gi|444566187|gb|ELV43023.1| dimethyladenosine transferase [Escherichia coli 99.0839]
gi|444568349|gb|ELV45024.1| dimethyladenosine transferase [Escherichia coli 99.0816]
gi|444572900|gb|ELV49301.1| dimethyladenosine transferase [Escherichia coli 99.0848]
gi|444583756|gb|ELV59444.1| dimethyladenosine transferase [Escherichia coli 99.1753]
gi|444586942|gb|ELV62418.1| dimethyladenosine transferase [Escherichia coli 99.1775]
gi|444587162|gb|ELV62632.1| dimethyladenosine transferase [Escherichia coli 99.1793]
gi|444600995|gb|ELV75804.1| dimethyladenosine transferase [Escherichia coli ATCC 700728]
gi|444601325|gb|ELV76132.1| dimethyladenosine transferase [Escherichia coli PA11]
gi|444610141|gb|ELV84571.1| dimethyladenosine transferase [Escherichia coli 99.1805]
gi|444616467|gb|ELV90629.1| dimethyladenosine transferase [Escherichia coli PA19]
gi|444618939|gb|ELV93004.1| dimethyladenosine transferase [Escherichia coli PA48]
gi|444625099|gb|ELV98970.1| dimethyladenosine transferase [Escherichia coli PA2]
gi|444633968|gb|ELW07459.1| dimethyladenosine transferase [Escherichia coli PA47]
gi|444639271|gb|ELW12590.1| dimethyladenosine transferase [Escherichia coli PA8]
gi|444649066|gb|ELW21972.1| dimethyladenosine transferase [Escherichia coli 7.1982]
gi|444651226|gb|ELW24035.1| dimethyladenosine transferase [Escherichia coli 99.1781]
gi|444664430|gb|ELW36618.1| dimethyladenosine transferase [Escherichia coli PA35]
gi|444673614|gb|ELW45240.1| dimethyladenosine transferase [Escherichia coli 95.0083]
gi|444675054|gb|ELW46535.1| dimethyladenosine transferase [Escherichia coli 99.0670]
Length = 273
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P HP+ D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V +L + P +R +SV ++
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VEVLTGMGIDPAMRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QMA 261
>gi|417826122|ref|ZP_12472705.1| dimethyladenosine transferase [Shigella flexneri J1713]
gi|335578502|gb|EGM63718.1| dimethyladenosine transferase [Shigella flexneri J1713]
Length = 273
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P HP+ D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V +L + P +R +SV ++
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VEVLTGIGIDPAMRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QMA 261
>gi|432552089|ref|ZP_19788823.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE47]
gi|431087788|gb|ELD93709.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE47]
Length = 273
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P HP+ D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V +L + P +R +SV ++
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VEVLTGMGIDPAMRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QMA 261
>gi|424048019|ref|ZP_17785575.1| dimethyladenosine transferase [Vibrio cholerae HENC-03]
gi|408883329|gb|EKM22116.1| dimethyladenosine transferase [Vibrio cholerae HENC-03]
Length = 269
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 57/119 (47%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G + RL++M Q +C V +P AF+P P+VD VV P HP DL
Sbjct: 147 LAAGPGSKAYGRLTVMAQYYCKVVPVLEVPPTAFVPPPKVDSAVVRLVPYEELPHPAKDL 206
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+L+ERV F R+K V L L +LE + P +RP L++Q+F
Sbjct: 207 --RLLERVCREGFNQRRKTVRNCYKSL-------LSTEVLEELGINPSMRPENLTLQQF 256
>gi|347756862|ref|YP_004864424.1| dimethyladenosine transferase [Micavibrio aeruginosavorus ARL-13]
gi|347589380|gb|AEP08422.1| dimethyladenosine transferase [Micavibrio aeruginosavorus ARL-13]
Length = 297
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 57/122 (46%), Gaps = 17/122 (13%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIID---- 56
M A G + RLS++ C F +P AF+P P+V VVH T HP+ D
Sbjct: 175 MSAAPGTDHYGRLSVLVGWLCKATMMFDLPPSAFVPPPKVTSTVVHLT--RHPVTDGASA 232
Query: 57 -LP-FKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQ 114
+P FK +ERV + F R+K + + +FP SLLE + R QL V
Sbjct: 233 QIPSFKTVERVTAAAFGQRRKMLRQSLK-IFP--------SLLESCGIDGTKRAEQLPVS 283
Query: 115 EF 116
+F
Sbjct: 284 DF 285
>gi|312883920|ref|ZP_07743637.1| dimethyladenosine transferase [Vibrio caribbenthicus ATCC BAA-2122]
gi|309368378|gb|EFP95913.1| dimethyladenosine transferase [Vibrio caribbenthicus ATCC BAA-2122]
Length = 268
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 58/119 (48%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G + RL++M Q +C V +P AF+P P+VD VV TP HP+ DL
Sbjct: 147 LAAGPGTKAYGRLTVMAQYFCKVMPVLEVPPSAFVPPPKVDSAVVRLTPYEDLPHPVADL 206
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
K ++RV F R+K V L L +LE + P +RP L++++F
Sbjct: 207 --KWLDRVCREGFNQRRKTVRNCYKGL-------LDTDVLEELGINPSMRPENLTLEQF 256
>gi|406939180|gb|EKD72255.1| dimethyladenosine transferase, partial [uncultured bacterium]
Length = 264
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 56/121 (46%), Gaps = 8/121 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV-HPIIDLPF 59
++A + RLS+M Q C + F +P AF P P+V +V P +P
Sbjct: 138 LVAENRNKNYGRLSVMVQYHCQAELLFDVPPDAFYPPPKVTSSIVRLVPHNPYPDSAKNM 197
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
L+ER+V F R+K + S++ PK L + P LRP Q++VQ+F I
Sbjct: 198 HLLERLVKFAFSQRRKTLRNSLSIMMPK-------ELWSHIPIDPNLRPEQITVQDFVMI 250
Query: 120 C 120
Sbjct: 251 S 251
>gi|377808877|ref|YP_005004098.1| dimethyladenosine transferase [Pediococcus claussenii ATCC BAA-344]
gi|361055618|gb|AEV94422.1| dimethyladenosine transferase [Pediococcus claussenii ATCC BAA-344]
Length = 297
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 66/128 (51%), Gaps = 7/128 (5%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPII--DLP 58
+ A G ++ LS++ Q + F +P K F+PKP+VD +V TPR I D
Sbjct: 164 LTAKPGTKEYGSLSVVVQYRMHTAVEFDVPAKVFVPKPKVDSAIVSLTPRDDWTIKPDDE 223
Query: 59 FKLIERVVSCIFRYRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEF 116
+ + V C F +R+K ++ L+ K ++ + +L+ + P +RP +L+V++F
Sbjct: 224 IEFFKTVHGC-FMHRRKNIWNNLQGLYGKDASIKETIQMVLDDLEISPQIRPERLTVEDF 282
Query: 117 GQICLAYR 124
I LA R
Sbjct: 283 --IRLANR 288
>gi|269960921|ref|ZP_06175291.1| dimethyladenosine transferase [Vibrio harveyi 1DA3]
gi|269834361|gb|EEZ88450.1| dimethyladenosine transferase [Vibrio harveyi 1DA3]
Length = 269
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 57/119 (47%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G + RL++M Q +C V +P AF+P P+VD VV P HP DL
Sbjct: 147 LAAGPGSKAYGRLTVMAQYYCKVVPVLEVPPTAFVPPPKVDSAVVRLVPYEELPHPAKDL 206
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+L+ERV F R+K V L L +LE + P +RP L++Q+F
Sbjct: 207 --RLLERVCREGFNQRRKTVRNCYKSL-------LSTEVLEELGINPSMRPENLTLQQF 256
>gi|410093045|ref|ZP_11289545.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas viridiflava UASWS0038]
gi|409759578|gb|EKN44789.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas viridiflava UASWS0038]
Length = 268
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 54/123 (43%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 145 LAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPHETLPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+L+ERVV F R+K + LL + A V LRP QL + F
Sbjct: 204 -HRLLERVVREAFNQRRKTLRNTLKLLLSSDD-------ITAAGVDGSLRPEQLDLAAFV 255
Query: 118 QIC 120
++
Sbjct: 256 RLA 258
>gi|339485334|ref|YP_004699862.1| dimethyladenosine transferase [Pseudomonas putida S16]
gi|431800453|ref|YP_007227356.1| KsgA/Dim1 family 16S ribosomal RNA methyltransferase [Pseudomonas
putida HB3267]
gi|338836177|gb|AEJ10982.1| dimethyladenosine transferase [Pseudomonas putida S16]
gi|430791218|gb|AGA71413.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas putida HB3267]
Length = 266
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 55/119 (46%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLP-- 58
M A G RLSIM Q C V+H F + AF P P+VD +V P H ++ P
Sbjct: 145 MAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVP--HEVLPYPAK 202
Query: 59 -FKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
KL+E+VV F R+K + L L + +E A V LRP QL + F
Sbjct: 203 DAKLLEQVVREAFNQRRKTLRNTMKGL-------LDSAAIEAAGVDGSLRPEQLDLAAF 254
>gi|430377363|ref|ZP_19431496.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Moraxella macacae 0408225]
gi|429540500|gb|ELA08529.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Moraxella macacae 0408225]
Length = 285
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 59/119 (49%), Gaps = 9/119 (7%)
Query: 12 RLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPFKLIERVVSCIF 70
RLS+M Q +C D+ T+P AF P P+V V TP + PI KL VV F
Sbjct: 165 RLSVMMQYFCQTDYLLTVPNGAFHPAPKVTSAVFRLTPYQQKPITANDEKLFALVVREAF 224
Query: 71 RYRQKQ---VYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQICLAYRDM 126
+R+K ++K +LL P ++ L+ + P+ RP LSV +F ++ D+
Sbjct: 225 NHRRKTLRAIFKKHALLPPISEQNLL-----DWQINPMARPETLSVADFVKLSNGITDL 278
>gi|409404587|ref|ZP_11253066.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Herbaspirillum sp. GW103]
gi|386436106|gb|EIJ48929.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Herbaspirillum sp. GW103]
Length = 260
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 60/116 (51%), Gaps = 8/116 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
M+A G + RLS+M Q +++ F +P AF P PQVD +V P P +D P
Sbjct: 141 MVAEPGGKAYGRLSVMLQWRYHMELLFVVPPTAFDPPPQVDSAIVRMIPLAQP-MDCPQA 199
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
L+E+VV+ F R+K + + LF + + L +A V P RP + V++F
Sbjct: 200 LLEQVVTKAFSQRRKVIRNCVAGLFTEDE-------LRQAGVDPQARPEAVPVEQF 248
>gi|409418305|ref|ZP_11258303.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas sp. HYS]
Length = 268
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 53/119 (44%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G RLSIM Q C V+H F + AF P P+VD +V P H + P K
Sbjct: 145 LAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVP--HETLPFPAK 202
Query: 61 ---LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
L+ER+V F R+K + L L +E A V LRP QL + F
Sbjct: 203 DHRLLERIVREAFNQRRKTLRNTLKAL-------LSSDAIEAAGVDGSLRPEQLDLAAF 254
>gi|388543070|ref|ZP_10146362.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas sp. M47T1]
gi|388279156|gb|EIK98726.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas sp. M47T1]
Length = 268
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 52/119 (43%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G RLSIM Q C V H F + AF P P+VD +V P HP D
Sbjct: 145 LAAGPGGGDWGRLSIMVQYHCRVVHLFNVGPGAFNPPPKVDSAIVRLVPHATLPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+L+ERVV F R+K + L L +E A V LRP QL + F
Sbjct: 204 -HRLLERVVREAFNQRRKTLRNTLKAL-------LSSEAIEAAGVDGSLRPEQLDLAAF 254
>gi|417126515|ref|ZP_11974069.1| dimethyladenosine transferase [Escherichia coli 97.0246]
gi|386144765|gb|EIG91229.1| dimethyladenosine transferase [Escherichia coli 97.0246]
Length = 273
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P HP+ D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V +L + P +R +SV ++
Sbjct: 208 --RVLSRITTESFNQRRKTIRNSLGNLFS-------VEVLTGMGIDPAMRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QMA 261
>gi|365851055|ref|ZP_09391503.1| dimethyladenosine transferase domain protein [Lactobacillus
parafarraginis F0439]
gi|363717580|gb|EHM00947.1| dimethyladenosine transferase domain protein [Lactobacillus
parafarraginis F0439]
Length = 156
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 67/126 (53%), Gaps = 7/126 (5%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF--- 59
A G + LS++ Q NVD FT+P AFIP+P+VD +V TP+ + ++ PF
Sbjct: 27 AKPGTKPYGSLSVIVQQQNNVDIAFTVPKTAFIPQPKVDSAIVKLTPKKNMGVE-PFDRK 85
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEFG 117
K + V C F +++K ++ +F K ++ + + L++ ++ RP QL V +F
Sbjct: 86 KFVGFVRGC-FMHQRKTLWNNLLGIFGKDADVKEQIQTTLDQLGIRAANRPEQLRVDQFV 144
Query: 118 QICLAY 123
+ A+
Sbjct: 145 ALTNAF 150
>gi|293375923|ref|ZP_06622184.1| dimethyladenosine transferase [Turicibacter sanguinis PC909]
gi|325838710|ref|ZP_08166625.1| dimethyladenosine transferase [Turicibacter sp. HGF1]
gi|292645445|gb|EFF63494.1| dimethyladenosine transferase [Turicibacter sanguinis PC909]
gi|325490760|gb|EGC93067.1| dimethyladenosine transferase [Turicibacter sp. HGF1]
Length = 291
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 52/119 (43%), Gaps = 1/119 (0%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-L 61
A G + LSI Q + +P FIP P VD VV T R P + + +
Sbjct: 163 ANPGSKDYNALSIAVQYYTEAKIALNVPKTVFIPAPNVDSSVVKLTKREQPAVAVENEDF 222
Query: 62 IERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
+V F+ R+K + + F ++ V LLE A + P R L+++EFG +
Sbjct: 223 FLEIVHAAFKQRRKTIQNNLNQHFNDLAKEDVTKLLEEAGIVPSRRGETLTIEEFGHLS 281
>gi|154253780|ref|YP_001414604.1| dimethyladenosine transferase [Parvibaculum lavamentivorans DS-1]
gi|154157730|gb|ABS64947.1| dimethyladenosine transferase [Parvibaculum lavamentivorans DS-1]
Length = 281
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 5/125 (4%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A G + RL+++ Q F + +AF P P V VV PR P+ + +
Sbjct: 161 IVAQPGGKAYGRLAVLAQWRAKAQILFDVDRRAFTPPPSVTSSVVELIPRAVPLAEANPR 220
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
++E VV+ F R+K + L P + LLE+A + P R +LSV++F +
Sbjct: 221 VLEAVVAAAFGQRRKMLRSSLRTLTPHS-----LPLLEKAGIDPTQRAEELSVEQFCALA 275
Query: 121 LAYRD 125
A+ +
Sbjct: 276 RAFAE 280
>gi|420334310|ref|ZP_14835933.1| dimethyladenosine transferase [Shigella flexneri K-315]
gi|391268487|gb|EIQ27412.1| dimethyladenosine transferase [Shigella flexneri K-315]
Length = 273
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P HP+ D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V +L + P +R +S+ ++
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VEVLTGMGIDPAMRAENISIAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QMA 261
>gi|424814959|ref|ZP_18240110.1| 16S rRNA dimethyladenosine transferase, SAM-dependent [Escherichia
fergusonii ECD227]
gi|325495979|gb|EGC93838.1| 16S rRNA dimethyladenosine transferase, SAM-dependent [Escherichia
fergusonii ECD227]
Length = 273
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P HP+ D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF + +L + P +R +SV ++
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------IEVLTGMGIDPAMRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QMA 261
>gi|116333120|ref|YP_794647.1| dimethyladenosine transferase [Lactobacillus brevis ATCC 367]
gi|122270191|sp|Q03T56.1|RSMA_LACBA RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|116098467|gb|ABJ63616.1| dimethyladenosine transferase [Lactobacillus brevis ATCC 367]
Length = 296
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 68/131 (51%), Gaps = 9/131 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPR----VHPIID 56
++A G + LS++ Q +V+ F +P AFIP+P VD ++ TPR V+P D
Sbjct: 165 LVAEPGTKAYGSLSVIMQYRAHVEIAFNVPRTAFIPQPNVDSAIIRLTPREALPVNPYED 224
Query: 57 LPFKLIERVVSCIFRYRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQ 114
K + V F +R+K ++ +F K+ R+ + ++L + + LRP +L++
Sbjct: 225 ---KALFSFVKGCFAHRRKSLWNNLQGIFGKQPEVRERIETVLNQTGISRQLRPERLTLL 281
Query: 115 EFGQICLAYRD 125
F ++ A+ +
Sbjct: 282 NFIELTNAFHN 292
>gi|156973129|ref|YP_001444036.1| dimethyladenosine transferase [Vibrio harveyi ATCC BAA-1116]
gi|388600357|ref|ZP_10158753.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Vibrio campbellii DS40M4]
gi|444424554|ref|ZP_21220010.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Vibrio campbellii CAIM 519 = NBRC 15631]
gi|166221714|sp|A7MWC6.1|RSMA_VIBHB RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|156524723|gb|ABU69809.1| hypothetical protein VIBHAR_00808 [Vibrio harveyi ATCC BAA-1116]
gi|444242260|gb|ELU53775.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Vibrio campbellii CAIM 519 = NBRC 15631]
Length = 269
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 57/119 (47%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G + RL++M Q +C V +P AF+P P+VD VV P HP DL
Sbjct: 147 LAAGPGSKAYGRLTVMAQYYCKVVPVLEVPPTAFVPPPKVDSAVVRLVPYEELPHPAKDL 206
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+L+ERV F R+K V L + +LE V P +RP L++Q+F
Sbjct: 207 --RLLERVCREGFNQRRKTVRNCYKAL-------ISAEVLEELGVNPSMRPENLTLQQF 256
>gi|443469972|ref|ZP_21060110.1| Dimethyladenosine transferase [Pseudomonas pseudoalcaligenes KF707]
gi|442899491|gb|ELS25939.1| Dimethyladenosine transferase [Pseudomonas pseudoalcaligenes KF707]
Length = 268
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 57/123 (46%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G RLSIM Q C V+H F + AF P P+VD +V P H ++ P K
Sbjct: 145 LAAEPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVP--HEVLPHPAK 202
Query: 61 ---LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
L+ERVV F R+K + K L + +E A V LRP QL + F
Sbjct: 203 DPALLERVVREAFNQRRKTLRN-------TLKGLLDAAAIEAAGVDGGLRPEQLDLAAFV 255
Query: 118 QIC 120
++
Sbjct: 256 RLA 258
>gi|86516023|gb|ABC97662.1| KsgA [Shigella boydii]
gi|86516025|gb|ABC97663.1| KsgA [Shigella boydii]
gi|86516041|gb|ABC97671.1| KsgA [Shigella boydii]
gi|86516045|gb|ABC97673.1| KsgA [Shigella boydii]
gi|86516049|gb|ABC97675.1| KsgA [Shigella boydii]
gi|86516053|gb|ABC97677.1| KsgA [Shigella boydii]
gi|86516071|gb|ABC97686.1| KsgA [Shigella dysenteriae]
Length = 256
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P HP+ D+
Sbjct: 135 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDV 194
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V +L + P +R +SV ++
Sbjct: 195 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VEVLTGMGLDPAMRAENISVAQYC 245
Query: 118 QIC 120
Q+
Sbjct: 246 QMA 248
>gi|55821771|ref|YP_140213.1| dimethyladenosine transferase [Streptococcus thermophilus LMG
18311]
gi|62900469|sp|Q5M2L6.1|RSMA_STRT2 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|55737756|gb|AAV61398.1| dimethyladenosine transferase (rRNA methylation) [Streptococcus
thermophilus LMG 18311]
Length = 290
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 3/116 (2%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ T R P++++ + RV F
Sbjct: 172 LSIAVQYYMTTKMAFAVPRTVFVPAPNVDSAILKMTRRKQPLVEVKDEDFFFRVSKASFL 231
Query: 72 YRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEFGQICLAYRD 125
+R+K ++ + F K + + + LE A +KP +R LS+ +F ++ A R+
Sbjct: 232 HRRKTLWNNLTSHFGKSEEVKNKLDQALENAAIKPSIRGEALSISDFARLSDALRE 287
>gi|187732780|ref|YP_001878864.1| dimethyladenosine transferase [Shigella boydii CDC 3083-94]
gi|226732626|sp|B2U259.1|RSMA_SHIB3 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|187429772|gb|ACD09046.1| dimethyladenosine transferase [Shigella boydii CDC 3083-94]
Length = 273
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P HP+ D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V +L + P +R +SV ++
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VEVLTGMGLDPAMRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QMA 261
>gi|429334667|ref|ZP_19215321.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas putida CSV86]
gi|428760738|gb|EKX82998.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas putida CSV86]
Length = 268
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 53/119 (44%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G RLSIM Q C V+H F + AF P P+VD +V P H + P K
Sbjct: 145 LAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVP--HETLPFPAK 202
Query: 61 ---LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
L+ER+V F R+K + L + +E A V LRP QL + F
Sbjct: 203 DHRLLERIVREAFNQRRKTLRNTLKALLDSQA-------IEAAGVDGSLRPEQLDLAAF 254
>gi|422806735|ref|ZP_16855166.1| dimethyladenosine transferase [Escherichia fergusonii B253]
gi|324112546|gb|EGC06523.1| dimethyladenosine transferase [Escherichia fergusonii B253]
Length = 273
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P HP+ D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF + +L + P +R +SV ++
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------IEVLTGMGIDPAMRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QMA 261
>gi|419157301|ref|ZP_13701833.1| dimethyladenosine transferase [Escherichia coli DEC6D]
gi|419162309|ref|ZP_13706790.1| dimethyladenosine transferase [Escherichia coli DEC6E]
gi|378015972|gb|EHV78862.1| dimethyladenosine transferase [Escherichia coli DEC6D]
gi|378017457|gb|EHV80329.1| dimethyladenosine transferase [Escherichia coli DEC6E]
Length = 273
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P HP+ D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF + +L + P +R +SV ++
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------IEVLTGMGIDPAMRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QMA 261
>gi|309787289|ref|ZP_07681901.1| dimethyladenosine transferase [Shigella dysenteriae 1617]
gi|308924867|gb|EFP70362.1| dimethyladenosine transferase [Shigella dysenteriae 1617]
Length = 249
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P HP+ D+
Sbjct: 124 LVAGPNSKVYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDV 183
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V +L + P +R +SV ++
Sbjct: 184 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VEVLTGMGIDPAMRAENISVAQYC 234
Query: 118 QIC 120
Q+
Sbjct: 235 QMA 237
>gi|452750760|ref|ZP_21950507.1| Dimethyladenosine transferase [alpha proteobacterium JLT2015]
gi|451961954|gb|EMD84363.1| Dimethyladenosine transferase [alpha proteobacterium JLT2015]
Length = 277
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 7/114 (6%)
Query: 12 RLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFKLIERVVSCIFR 71
RLS++ Q +P +AF+P P+VD +VH TPR P + + +++ R+ + F
Sbjct: 170 RLSVLAQWRSTARIAMRLPARAFVPPPKVDSAIVHITPRAQP-VGVDAEILSRLTAAAFG 228
Query: 72 YRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQICLAYRD 125
R+K + ASL + + LE ++ RP +SVQEF +I D
Sbjct: 229 QRRKMLR--ASL----KSVPNALEALETLGIEATRRPETISVQEFVEIARILSD 276
>gi|163802665|ref|ZP_02196556.1| dimethyladenosine transferase [Vibrio sp. AND4]
gi|159173553|gb|EDP58373.1| dimethyladenosine transferase [Vibrio sp. AND4]
Length = 270
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 57/119 (47%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPR---VHPIIDL 57
+ A G + RL++M Q +C V +P AF+P P+VD VV P HP DL
Sbjct: 147 LAAGPGSKAYGRLTVMAQYFCKVVPVLEVPPTAFVPPPKVDSAVVRLMPYDVLPHPAKDL 206
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+L+ERV F R+K V K L +LE V P +RP L++Q+F
Sbjct: 207 --RLLERVCREGFNQRRKTVRN-------CYKSLLSTEVLEELGVNPSMRPENLTLQQF 256
>gi|257455041|ref|ZP_05620285.1| dimethyladenosine transferase [Enhydrobacter aerosaccus SK60]
gi|257447554|gb|EEV22553.1| dimethyladenosine transferase [Enhydrobacter aerosaccus SK60]
Length = 289
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 55/109 (50%), Gaps = 9/109 (8%)
Query: 12 RLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPFKLIERVVSCIF 70
RLSIM Q +C D+ T+P AF P P+V V P + PI+ KL VV F
Sbjct: 170 RLSIMMQYYCETDYLLTVPNGAFNPPPKVTSAVFRLRPYQQKPIVADDEKLFALVVREAF 229
Query: 71 RYRQKQ---VYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+R+K ++K + +L + QLV L P+ RP LSVQ+F
Sbjct: 230 NHRRKTLRAIFKKSPILPAVTEHQLVAWGL-----NPLARPETLSVQDF 273
>gi|82775456|ref|YP_401803.1| dimethyladenosine transferase [Shigella dysenteriae Sd197]
gi|119365843|sp|Q32K43.1|RSMA_SHIDS RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|81239604|gb|ABB60314.1| S-adenosylmethionine-6-N',N'-adenosyl dimethyltransferase [Shigella
dysenteriae Sd197]
Length = 273
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P HP+ D+
Sbjct: 148 LVAGPNSKVYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V +L + P +R +SV ++
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VEVLTGMGIDPAMRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QMA 261
>gi|293392900|ref|ZP_06637217.1| dimethyladenosine transferase [Serratia odorifera DSM 4582]
gi|291424434|gb|EFE97646.1| dimethyladenosine transferase [Serratia odorifera DSM 4582]
Length = 272
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P V H + D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPTAFAPPPKVDSAVVRLVPHVLMPHTVSDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K V LF + L V P LR +SV ++
Sbjct: 208 --RMLSRITTQAFNQRRKTVRNSLGDLFTPEQ-------LSELGVDPTLRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QLA 261
>gi|301024796|ref|ZP_07188434.1| dimethyladenosine transferase [Escherichia coli MS 196-1]
gi|423700838|ref|ZP_17675297.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
H730]
gi|432561976|ref|ZP_19798609.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE51]
gi|433046082|ref|ZP_20233527.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE120]
gi|442594133|ref|ZP_21012056.1| SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase [Escherichia coli O10:K5(L):H4 str.
ATCC 23506]
gi|299880286|gb|EFI88497.1| dimethyladenosine transferase [Escherichia coli MS 196-1]
gi|385713759|gb|EIG50688.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
H730]
gi|431100939|gb|ELE05908.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE51]
gi|431574382|gb|ELI47163.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE120]
gi|441605958|emb|CCP97336.1| SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase [Escherichia coli O10:K5(L):H4 str.
ATCC 23506]
Length = 273
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P HP+ D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V +L + P +R +SV ++
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VEVLTGMRIDPAMRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QMA 261
>gi|432944619|ref|ZP_20141029.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE196]
gi|433041549|ref|ZP_20229088.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE117]
gi|431464550|gb|ELH44669.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE196]
gi|431561194|gb|ELI34578.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE117]
Length = 273
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P HP+ D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V +L + P +R +SV ++
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VEVLTGMEIDPAMRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QMA 261
>gi|75753575|gb|ABA26919.1| KsgA, partial [Vibrio harveyi]
Length = 143
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 57/119 (47%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPR---VHPIIDL 57
+ A G + RL++M Q +C V +P AF+P P+VD VV P HP DL
Sbjct: 21 LAAGPGSKAYGRLTVMAQYYCKVVPVLEVPPTAFVPPPKVDSAVVRLVPYEELPHPAKDL 80
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+L+ERV F R+K V L + +LE V P +RP L++Q+F
Sbjct: 81 --RLLERVCREGFNQRRKTVRNCYKAL-------ISAEVLEELGVNPSMRPENLTLQQF 130
>gi|398814647|ref|ZP_10573327.1| dimethyladenosine transferase [Brevibacillus sp. BC25]
gi|398036356|gb|EJL29572.1| dimethyladenosine transferase [Brevibacillus sp. BC25]
Length = 297
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 2/120 (1%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-L 61
A G + LS+ Q + + + +P FIP+P VD V+ R P +D+ + +
Sbjct: 168 AKPGTKDYGSLSVAAQFYADTEVAMIVPASVFIPRPNVDSAVIRLKVRDRPPVDVDDQDV 227
Query: 62 IERVVSCIFRYRQKQVYKP-ASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
RVV F R+K + + LFPK ++ V+ +L + P R LS+ EF ++
Sbjct: 228 FFRVVRSSFAQRRKTLLNNLMNGLFPKTQKDEVIQMLTDIGIDPTRRGETLSLDEFARLA 287
>gi|372269006|ref|ZP_09505054.1| dimethyladenosine transferase [Alteromonas sp. S89]
Length = 272
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G++ RLS+M Q +C V F +P ++F P P+VD +V P H + P +
Sbjct: 145 LSAVPGVKAYGRLSVMTQYYCRVQGLFPVPPQSFRPAPKVDSAIVRLVP--HKSLPHPAE 202
Query: 61 ---LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
L+ER+VS F+ R+K + LFP E+ V RP LSV+E+
Sbjct: 203 NEALLERIVSVAFQQRRKTLRNALKPLFPDLDP-------EQLPVDTSRRPETLSVKEYV 255
Query: 118 QIC 120
++
Sbjct: 256 ELA 258
>gi|409436687|ref|ZP_11263857.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Rhizobium mesoamericanum STM3625]
gi|408751611|emb|CCM75011.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Rhizobium mesoamericanum STM3625]
Length = 275
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 55/116 (47%), Gaps = 8/116 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++ATE + RL ++C N F IP +AF P P+V VVH TP +P I
Sbjct: 161 VVATEDGDHYGRLGVLCGWRTNARMAFDIPPQAFTPPPKVTSTVVHLTPNENP-IPCSVA 219
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+E+V F R+K + + L + +LL +A + P R LSV EF
Sbjct: 220 NLEKVTQAAFGQRRKMLRQSLKALGGE-------ALLNKADIDPQRRAETLSVAEF 268
>gi|350596263|ref|XP_003484249.1| PREDICTED: mitochondrial dimethyladenosine transferase 1-like,
partial [Sus scrofa]
Length = 222
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 31/39 (79%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQ 39
+IA++G +QR RLSIM Q C+V H TIPG+AF+PKP+
Sbjct: 184 LIASKGSKQRSRLSIMAQYLCDVQHVLTIPGRAFVPKPE 222
>gi|347520976|ref|YP_004778547.1| dimethyladenosine transferase [Lactococcus garvieae ATCC 49156]
gi|385832339|ref|YP_005870114.1| dimethyladenosine transferase [Lactococcus garvieae Lg2]
gi|343179544|dbj|BAK57883.1| dimethyladenosine transferase [Lactococcus garvieae ATCC 49156]
gi|343181492|dbj|BAK59830.1| dimethyladenosine transferase [Lactococcus garvieae Lg2]
Length = 296
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 9/115 (7%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPII-----DLPFKLIERVVS 67
LSI Q + FT+P F+P P VD ++ T R P++ D FK +
Sbjct: 178 LSIAVQYYMEAQVAFTVPRTVFVPAPNVDSAILKMTRREQPLVAVKDEDFFFK----TMH 233
Query: 68 CIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQICLA 122
F +R+K + F K K+ + LL +A + P +R LS+ EF ++ A
Sbjct: 234 STFVHRRKTLMNNLQSAFGKDKKPQITELLAQADISPTIRAEALSIPEFARLADA 288
>gi|419806605|ref|ZP_14331705.1| dimethyladenosine transferase [Escherichia coli AI27]
gi|384470398|gb|EIE54509.1| dimethyladenosine transferase [Escherichia coli AI27]
Length = 249
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 57/123 (46%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P HP+ D+
Sbjct: 124 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDV 183
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF +L + P +R +SV ++
Sbjct: 184 --RVLSRITTEAFNQRRKTIRNSLGNLFSAE-------VLTGMGIDPAMRAENISVAQYC 234
Query: 118 QIC 120
Q+
Sbjct: 235 QMA 237
>gi|190891131|ref|YP_001977673.1| dimethyladenosine transferase [Rhizobium etli CIAT 652]
gi|218515820|ref|ZP_03512660.1| dimethyladenosine transferase [Rhizobium etli 8C-3]
gi|226732613|sp|B3PUU6.1|RSMA_RHIE6 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|190696410|gb|ACE90495.1| dimethyladenosine transferase (16S rRNA dimethylase) protein
[Rhizobium etli CIAT 652]
Length = 275
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 56/116 (48%), Gaps = 8/116 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++ATE + RL ++C F +P +AF P P+V VVH TPR +P I
Sbjct: 161 IVATEDDDHYGRLGVLCGWRTEARMAFDVPPQAFTPPPKVTSTVVHLTPRKNP-IPCSVA 219
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+E+V F R+K + + L + SLL +A + P R LSV+EF
Sbjct: 220 NLEKVTQAAFGQRRKMLRQSLKPLGGE-------SLLVKAGIDPARRAETLSVEEF 268
>gi|169825672|ref|YP_001695830.1| dimethyladenosine transferase [Lysinibacillus sphaericus C3-41]
gi|226732594|sp|B1HS82.1|RSMA_LYSSC RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|168990160|gb|ACA37700.1| Dimethyladenosine transferase [Lysinibacillus sphaericus C3-41]
Length = 293
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 56/129 (43%), Gaps = 11/129 (8%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G ++ LSI Q + D T+P F+P+P VD V+ P P K
Sbjct: 162 ITAKPGTKEYGSLSIAIQYYVKADIAMTVPKTVFMPQPNVDSAVIRLIKHDEP----PVK 217
Query: 61 LIER-----VVSCIFRYRQKQVYKPASLLFPKRKRQ--LVVSLLERACVKPILRPYQLSV 113
+I V F R+K +Y P K Q ++ L A ++P R L++
Sbjct: 218 VINEDFLFVVTRASFVQRRKTIYNNLQAGLPNGKTQKDFILEALAAANIEPTRRGETLTI 277
Query: 114 QEFGQICLA 122
QEFG++ A
Sbjct: 278 QEFGKLADA 286
>gi|239637479|ref|ZP_04678453.1| dimethyladenosine transferase [Staphylococcus warneri L37603]
gi|239596924|gb|EEQ79447.1| dimethyladenosine transferase [Staphylococcus warneri L37603]
Length = 296
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 11/124 (8%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLP---- 58
A G + LSI+ Q + T+P F+P P VD VV R P++D+
Sbjct: 165 AEVGTKAYGSLSIVTQYYTETSKVLTVPKTVFMPPPNVDSIVVKLMQRSTPLVDIDDEEA 224
Query: 59 -FKLIERVVSCIFRYRQKQVYKPASLLFP--KRKRQLVVSLLERACVKPILRPYQLSVQE 115
FKL F R+K + F K+ ++ ++S LE+A + P R LS+Q+
Sbjct: 225 FFKL----AKAAFAQRRKTINNNYQNFFKEGKQHKESILSWLEKANIDPRRRGETLSIQD 280
Query: 116 FGQI 119
F Q+
Sbjct: 281 FAQL 284
>gi|417643167|ref|ZP_12293228.1| dimethyladenosine transferase [Staphylococcus warneri VCU121]
gi|445060530|ref|YP_007385934.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Staphylococcus warneri SG1]
gi|330686078|gb|EGG97700.1| dimethyladenosine transferase [Staphylococcus epidermidis VCU121]
gi|443426587|gb|AGC91490.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Staphylococcus warneri SG1]
Length = 296
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 11/124 (8%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLP---- 58
A G + LSI+ Q + T+P F+P P VD VV R P++D+
Sbjct: 165 AEVGTKAYGSLSIVTQYYTETSKVLTVPKTVFMPPPNVDSIVVKLMQRSTPLVDIDDEEA 224
Query: 59 -FKLIERVVSCIFRYRQKQVYKPASLLFP--KRKRQLVVSLLERACVKPILRPYQLSVQE 115
FKL F R+K + F K+ ++ ++S LE+A + P R LS+Q+
Sbjct: 225 FFKL----AKAAFAQRRKTINNNYQNFFKEGKQHKESILSWLEKANIDPRRRGETLSIQD 280
Query: 116 FGQI 119
F Q+
Sbjct: 281 FAQL 284
>gi|374260482|ref|ZP_09619079.1| dimethyladenosine transferase [Legionella drancourtii LLAP12]
gi|363539063|gb|EHL32460.1| dimethyladenosine transferase [Legionella drancourtii LLAP12]
Length = 256
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 58/121 (47%), Gaps = 8/121 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPF 59
M A G + RL++M Q C+VD+ F +P +AF P+P+VD VV P P +
Sbjct: 138 MAAQPGTKDYGRLTVMLQYHCDVDYLFAVPPEAFEPRPKVDSAVVRLVPYEKSPFESVAV 197
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
+ +ER+V+ F R+K + K + L + RP Q+SV E+ Q+
Sbjct: 198 EQLERLVASAFAMRRKTLNN-------NLKGIISAEQLLDLGIDGGRRPEQISVAEYVQL 250
Query: 120 C 120
Sbjct: 251 A 251
>gi|218693523|ref|YP_002401190.1| dimethyladenosine transferase [Escherichia coli 55989]
gi|407467511|ref|YP_006786047.1| KsgA/Dim1 family 16S ribosomal RNA methyltransferase [Escherichia
coli O104:H4 str. 2009EL-2071]
gi|407483773|ref|YP_006780922.1| KsgA/Dim1 family 16S ribosomal RNA methyltransferase [Escherichia
coli O104:H4 str. 2011C-3493]
gi|410484313|ref|YP_006771859.1| KsgA/Dim1 family 16S ribosomal RNA methyltransferase [Escherichia
coli O104:H4 str. 2009EL-2050]
gi|417803391|ref|ZP_12450431.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli O104:H4 str. LB226692]
gi|417831149|ref|ZP_12477679.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli O104:H4 str. 01-09591]
gi|417864425|ref|ZP_12509471.1| ksgA [Escherichia coli O104:H4 str. C227-11]
gi|422990760|ref|ZP_16981531.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. C227-11]
gi|422992700|ref|ZP_16983464.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. C236-11]
gi|422997909|ref|ZP_16988665.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. 09-7901]
gi|423006393|ref|ZP_16997137.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. 04-8351]
gi|423008015|ref|ZP_16998753.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. 11-3677]
gi|423022201|ref|ZP_17012904.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. 11-4404]
gi|423027356|ref|ZP_17018049.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. 11-4522]
gi|423033193|ref|ZP_17023877.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. 11-4623]
gi|423036059|ref|ZP_17026733.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. 11-4632 C1]
gi|423041179|ref|ZP_17031846.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. 11-4632 C2]
gi|423047865|ref|ZP_17038522.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. 11-4632 C3]
gi|423056403|ref|ZP_17045208.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. 11-4632 C4]
gi|423058414|ref|ZP_17047210.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. 11-4632 C5]
gi|429722258|ref|ZP_19257157.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. Ec11-9450]
gi|429774336|ref|ZP_19306340.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. 11-02030]
gi|429779596|ref|ZP_19311552.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. 11-02033-1]
gi|429783651|ref|ZP_19315565.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. 11-02092]
gi|429788989|ref|ZP_19320865.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. 11-02093]
gi|429795219|ref|ZP_19327046.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. 11-02281]
gi|429801145|ref|ZP_19332924.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. 11-02318]
gi|429804777|ref|ZP_19336525.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. 11-02913]
gi|429809588|ref|ZP_19341291.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. 11-03439]
gi|429815348|ref|ZP_19347008.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. 11-04080]
gi|429820559|ref|ZP_19352174.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. 11-03943]
gi|429906610|ref|ZP_19372580.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. Ec11-9990]
gi|429910805|ref|ZP_19376762.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. Ec11-9941]
gi|429916645|ref|ZP_19382586.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. Ec11-4984]
gi|429921683|ref|ZP_19387605.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. Ec11-5604]
gi|429927500|ref|ZP_19393407.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. Ec11-4986]
gi|429931433|ref|ZP_19397329.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. Ec11-4987]
gi|429937976|ref|ZP_19403857.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. Ec11-4988]
gi|429938691|ref|ZP_19404565.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. Ec11-5603]
gi|429946332|ref|ZP_19412188.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. Ec11-6006]
gi|429948980|ref|ZP_19414828.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. Ec12-0465]
gi|429957247|ref|ZP_19423076.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. Ec12-0466]
gi|432752883|ref|ZP_19987454.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE29]
gi|432763339|ref|ZP_19997796.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE48]
gi|254807867|sp|B7L4H4.1|RSMA_ECO55 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|218350255|emb|CAU95938.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Escherichia coli 55989]
gi|340736223|gb|EGR65271.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli O104:H4 str. 01-09591]
gi|340741937|gb|EGR76078.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli O104:H4 str. LB226692]
gi|341917714|gb|EGT67329.1| ksgA [Escherichia coli O104:H4 str. C227-11]
gi|354859259|gb|EHF19707.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. 04-8351]
gi|354859746|gb|EHF20193.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. C227-11]
gi|354866443|gb|EHF26866.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. C236-11]
gi|354876777|gb|EHF37137.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. 09-7901]
gi|354881786|gb|EHF42114.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. 11-4404]
gi|354884884|gb|EHF45195.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. 11-3677]
gi|354886331|gb|EHF46618.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. 11-4522]
gi|354889847|gb|EHF50094.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. 11-4623]
gi|354902047|gb|EHF62169.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. 11-4632 C1]
gi|354905373|gb|EHF65456.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. 11-4632 C2]
gi|354907880|gb|EHF67936.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. 11-4632 C3]
gi|354910151|gb|EHF70179.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. 11-4632 C4]
gi|354918352|gb|EHF78308.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. 11-4632 C5]
gi|406779475|gb|AFS58899.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli O104:H4 str. 2009EL-2050]
gi|407056070|gb|AFS76121.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli O104:H4 str. 2011C-3493]
gi|407063546|gb|AFS84593.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli O104:H4 str. 2009EL-2071]
gi|429352386|gb|EKY89101.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. 11-02030]
gi|429353442|gb|EKY90150.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. 11-02033-1]
gi|429353940|gb|EKY90645.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. 11-02092]
gi|429367430|gb|EKZ04024.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. 11-02093]
gi|429368582|gb|EKZ05168.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. 11-02281]
gi|429370808|gb|EKZ07371.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. 11-02318]
gi|429383182|gb|EKZ19643.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. 11-02913]
gi|429386031|gb|EKZ22481.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. 11-03439]
gi|429386944|gb|EKZ23389.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. 11-03943]
gi|429398204|gb|EKZ34547.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. 11-04080]
gi|429399920|gb|EKZ36238.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. Ec11-9450]
gi|429400254|gb|EKZ36571.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. Ec11-9990]
gi|429411345|gb|EKZ47555.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. Ec11-4984]
gi|429412917|gb|EKZ49107.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. Ec11-4986]
gi|429419969|gb|EKZ56103.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. Ec11-4987]
gi|429423831|gb|EKZ59938.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. Ec11-4988]
gi|429429988|gb|EKZ66055.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. Ec11-5603]
gi|429435930|gb|EKZ71947.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. Ec11-5604]
gi|429443114|gb|EKZ79067.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. Ec12-0465]
gi|429445536|gb|EKZ81477.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. Ec11-6006]
gi|429452005|gb|EKZ87892.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. Ec12-0466]
gi|429456856|gb|EKZ92699.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
O104:H4 str. Ec11-9941]
gi|431291541|gb|ELF82044.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE29]
gi|431314414|gb|ELG02366.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE48]
Length = 273
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 57/123 (46%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P HP+ D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF +L + P +R +SV ++
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------AEVLTGMGIDPAMRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QMA 261
>gi|421770168|ref|ZP_16206869.1| Dimethyladenosine transferase [Lactobacillus rhamnosus LRHMDP2]
gi|421772754|ref|ZP_16209407.1| Dimethyladenosine transferase [Lactobacillus rhamnosus LRHMDP3]
gi|411182696|gb|EKS49841.1| Dimethyladenosine transferase [Lactobacillus rhamnosus LRHMDP2]
gi|411183168|gb|EKS50308.1| Dimethyladenosine transferase [Lactobacillus rhamnosus LRHMDP3]
Length = 294
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 57/123 (46%), Gaps = 1/123 (0%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF-KL 61
A G + LSI Q +V FT+ AF+P P VD +V T R P+ +
Sbjct: 164 AAPGSKDYGSLSIAVQLVADVATAFTVSRHAFVPAPNVDSAIVTLTQRPEPLAAVKNPDS 223
Query: 62 IERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQICL 121
+R+V F R+K ++ LF K + + + L A + P R QL++ +F ++
Sbjct: 224 FDRLVRGAFVSRRKTLWNNLVALFGKPNKDAIRTALSVAEIAPETRAEQLAIADFARLDE 283
Query: 122 AYR 124
A R
Sbjct: 284 ALR 286
>gi|354721681|ref|ZP_09035896.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Enterobacter mori LMG 25706]
Length = 273
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 60/123 (48%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP---RVHPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P + +P+ DL
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHKTKPYPVKDL 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ RV + F R+K + S F V +L + P +R +SV+++
Sbjct: 208 --RVLSRVTTEAFNQRRKTIRNSLSNSF-------TVEVLAELGIDPAMRAENISVEQYC 258
Query: 118 QIC 120
++
Sbjct: 259 KLA 261
>gi|330814914|ref|XP_003291474.1| hypothetical protein DICPUDRAFT_156077 [Dictyostelium purpureum]
gi|325078362|gb|EGC32018.1| hypothetical protein DICPUDRAFT_156077 [Dictyostelium purpureum]
Length = 489
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 56/123 (45%), Gaps = 9/123 (7%)
Query: 6 GMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK---LI 62
G RLS+M Q + +PGKAF+P P+VD VV PR++P+ P K
Sbjct: 167 GTADYSRLSVMVQQSAIPRITYQLPGKAFVPPPKVDAAVVEIEPRINPLGKEPLKNHQYF 226
Query: 63 ERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQICLA 122
E V +F +R+K V L +LLE + P RP +SV +F +
Sbjct: 227 EFVCRELFAHRRKTVSNVIKNL-----GNGADALLE-GIIDPKTRPQNISVDQFVDLTNR 280
Query: 123 YRD 125
Y D
Sbjct: 281 YCD 283
>gi|386345507|ref|YP_006041671.1| dimethyladenosine transferase [Streptococcus thermophilus JIM 8232]
gi|339278968|emb|CCC20716.1| dimethyladenosine transferase (S-adenosylmethionine-6-N ,
N-adenosyl(rRNA) dimethyltransferase) (16S rRNA
dimethylase) (High level kasugamycin resistance protein
ksgA) (Kasugamycin dimethyltransferase) [Streptococcus
thermophilus JIM 8232]
Length = 290
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 3/116 (2%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ T R P++++ + RV F
Sbjct: 172 LSIAVQYYMTTKVAFAVPRTVFVPAPNVDSAILKMTRRKQPLVEVKDEDFFFRVSKASFL 231
Query: 72 YRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEFGQICLAYRD 125
+R+K ++ + F K + + + LE A +KP +R LS+ +F ++ A R+
Sbjct: 232 HRRKTLWNNLTSHFGKSEEVKNKLDQALENAAIKPSIRGEALSISDFARLSDALRE 287
>gi|445382869|ref|ZP_21427337.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Streptococcus thermophilus MTCC 5460]
gi|445395623|ref|ZP_21429068.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Streptococcus thermophilus MTCC 5461]
gi|444748394|gb|ELW73364.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Streptococcus thermophilus MTCC 5461]
gi|444748512|gb|ELW73477.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Streptococcus thermophilus MTCC 5460]
Length = 290
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 3/116 (2%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ T R P++++ + RV F
Sbjct: 172 LSIAVQYYMTAKVAFAVPRTVFVPAPNVDSAILKMTRRKQPLVEVKDEDFFFRVSKASFL 231
Query: 72 YRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEFGQICLAYRD 125
+R+K ++ + F K + + + LE A +KP +R LS+ +F ++ A R+
Sbjct: 232 HRRKTLWNNLTSHFGKSEEVKNKLDQALENAAIKPSIRGEALSISDFARLSDALRE 287
>gi|270290912|ref|ZP_06197136.1| dimethyladenosine transferase [Pediococcus acidilactici 7_4]
gi|304386409|ref|ZP_07368742.1| dimethyladenosine transferase [Pediococcus acidilactici DSM 20284]
gi|418068507|ref|ZP_12705789.1| dimethyladenosine transferase [Pediococcus acidilactici MA18/5M]
gi|427441756|ref|ZP_18925413.1| dimethyladenosine transferase [Pediococcus lolii NGRI 0510Q]
gi|270280972|gb|EFA26806.1| dimethyladenosine transferase [Pediococcus acidilactici 7_4]
gi|304327766|gb|EFL94993.1| dimethyladenosine transferase [Pediococcus acidilactici DSM 20284]
gi|357539243|gb|EHJ23262.1| dimethyladenosine transferase [Pediococcus acidilactici MA18/5M]
gi|425786945|dbj|GAC46201.1| dimethyladenosine transferase [Pediococcus lolii NGRI 0510Q]
Length = 297
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 63/122 (51%), Gaps = 9/122 (7%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPR----VHPIID 56
+ A G ++ LS++ Q FT+P + F+P+P+VD +V TPR V+P D
Sbjct: 164 LTAQPGDKEYGSLSVVVQYRMQTQVEFTVPARVFVPQPKVDSAIVSLTPRKDWPVYPADD 223
Query: 57 LPFKLIERVVSCIFRYRQKQVYKPASLLFPK--RKRQLVVSLLERACVKPILRPYQLSVQ 114
F + V F +R+K ++ L+ K ++ + S+L+ + P +RP +L+V
Sbjct: 224 RDFF---KTVHGCFMHRRKNLWNNMQGLYGKAPETKEKIQSVLDELEIDPHIRPERLTVV 280
Query: 115 EF 116
+F
Sbjct: 281 DF 282
>gi|218687929|ref|YP_002396141.1| dimethyladenosine transferase [Escherichia coli ED1a]
gi|254807868|sp|B7MNR0.1|RSMA_ECO81 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|218425493|emb|CAR06275.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Escherichia coli ED1a]
Length = 273
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 57/123 (46%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P HP+ D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF +L + P +R +SV ++
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------AEVLTGMGIDPAMRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QMA 261
>gi|116628487|ref|YP_821106.1| dimethyladenosine transferase [Streptococcus thermophilus LMD-9]
gi|122266918|sp|Q03IR2.1|RSMA_STRTD RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|116101764|gb|ABJ66910.1| dimethyladenosine transferase [Streptococcus thermophilus LMD-9]
Length = 290
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 3/116 (2%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ T R P++++ + RV F
Sbjct: 172 LSIAVQYYMTTKVAFAVPRTVFVPAPNVDSAILKMTRRKQPLVEVKDEDFFFRVSKASFL 231
Query: 72 YRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEFGQICLAYRD 125
+R+K ++ + F K + + + LE A +KP +R LS+ +F ++ A R+
Sbjct: 232 HRRKTLWNNLTSHFGKSEEVKNKLDQALENAAIKPSIRGEALSISDFARLSDALRE 287
>gi|55823689|ref|YP_142130.1| dimethyladenosine transferase [Streptococcus thermophilus CNRZ1066]
gi|386087400|ref|YP_006003274.1| ribosomal RNA small subunit methyltransferase A [Streptococcus
thermophilus ND03]
gi|387910495|ref|YP_006340801.1| dimethyladenosine transferase [Streptococcus thermophilus
MN-ZLW-002]
gi|62900468|sp|Q5LY12.1|RSMA_STRT1 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|55739674|gb|AAV63315.1| dimethyladenosine transferase (rRNA methylation) [Streptococcus
thermophilus CNRZ1066]
gi|312279113|gb|ADQ63770.1| Ribosomal RNA small subunit methyltransferase A [Streptococcus
thermophilus ND03]
gi|387575430|gb|AFJ84136.1| dimethyladenosine transferase [Streptococcus thermophilus
MN-ZLW-002]
Length = 290
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 3/116 (2%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ T R P++++ + RV F
Sbjct: 172 LSIAVQYYMTAKVAFAVPRTVFVPAPNVDSAILKMTRRKQPLVEVKDEDFFFRVSKASFL 231
Query: 72 YRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEFGQICLAYRD 125
+R+K ++ + F K + + + LE A +KP +R LS+ +F ++ A R+
Sbjct: 232 HRRKTLWNNLTSHFGKSEEVKNKLDQALENAAIKPSIRGEALSISDFARLSDALRE 287
>gi|419956691|ref|ZP_14472758.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Enterobacter cloacae subsp. cloacae GS1]
gi|449474768|ref|XP_004154280.1| PREDICTED: ribosomal RNA small subunit methyltransferase A-like
[Cucumis sativus]
gi|295098565|emb|CBK87655.1| dimethyladenosine transferase [Enterobacter cloacae subsp. cloacae
NCTC 9394]
gi|388608448|gb|EIM37651.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Enterobacter cloacae subsp. cloacae GS1]
Length = 273
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 59/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P +P+ DL
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHKTMPYPVKDL 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V +L + P +R +SV+++
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLGNLF-------TVDVLAELGIDPAMRAENISVEQYC 258
Query: 118 QIC 120
++
Sbjct: 259 KLA 261
>gi|456012115|gb|EMF45832.1| Dimethyladenosine transferase [Planococcus halocryophilus Or1]
Length = 256
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 57/125 (45%), Gaps = 7/125 (5%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHP---IIDL 57
+ A G + LSI Q + + T+P F+P+P VD V+ T R P +ID
Sbjct: 126 ITAKPGTKAYGSLSIAIQYYTQAEMALTVPKSVFLPQPNVDSAVIRMTKRDVPEVEVIDE 185
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFP--KRKRQLVVSLLERACVKPILRPYQLSVQE 115
F V F R+K + + P K K++ ++ LE A + P R L+++E
Sbjct: 186 DFFFT--VTRGSFVQRRKTILNNLQVAMPLGKEKKEFILKALEEAEIDPTRRGETLTIKE 243
Query: 116 FGQIC 120
FG +
Sbjct: 244 FGLLS 248
>gi|86516095|gb|ABC97698.1| KsgA [Shigella flexneri]
Length = 256
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 59/134 (44%), Gaps = 15/134 (11%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P HP+ D+
Sbjct: 135 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDV 194
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V +L + P +R +SV
Sbjct: 195 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VEVLTGMGIDPAMRAENISV---A 242
Query: 118 QICLAYRDMCEEMP 131
Q C + E P
Sbjct: 243 QDCQMANYLAENAP 256
>gi|300923999|ref|ZP_07140000.1| dimethyladenosine transferase [Escherichia coli MS 182-1]
gi|301330178|ref|ZP_07222840.1| dimethyladenosine transferase [Escherichia coli MS 78-1]
gi|417594893|ref|ZP_12245569.1| dimethyladenosine transferase [Escherichia coli 3030-1]
gi|417605974|ref|ZP_12256508.1| dimethyladenosine transferase [Escherichia coli STEC_DG131-3]
gi|422957605|ref|ZP_16969819.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
H494]
gi|450208915|ref|ZP_21893843.1| dimethyladenosine transferase [Escherichia coli O08]
gi|300419768|gb|EFK03079.1| dimethyladenosine transferase [Escherichia coli MS 182-1]
gi|300843818|gb|EFK71578.1| dimethyladenosine transferase [Escherichia coli MS 78-1]
gi|345363105|gb|EGW95248.1| dimethyladenosine transferase [Escherichia coli 3030-1]
gi|345366828|gb|EGW98917.1| dimethyladenosine transferase [Escherichia coli STEC_DG131-3]
gi|371597930|gb|EHN86748.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
H494]
gi|449323869|gb|EMD13815.1| dimethyladenosine transferase [Escherichia coli O08]
Length = 273
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 57/123 (46%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P HP+ D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V + + P +R +SV ++
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VEVFTGMGIDPAMRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QMA 261
>gi|399911996|ref|ZP_10780310.1| dimethyladenosine transferase [Halomonas sp. KM-1]
Length = 270
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF- 59
+ A G RLS+M Q C VD FT+P +AF+P+P+VD +V TP +LP+
Sbjct: 147 LAAEPGGADWGRLSVMAQYRCRVDDLFTVPPEAFVPRPKVDSAIVRLTPYA----ELPWP 202
Query: 60 ----KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQE 115
L+ VV F R+K + K + L + P RP L+V+E
Sbjct: 203 ATNEALLFDVVRQAFSQRRKTLRN-------NLKGVVDGDTLTALGIDPARRPQTLNVEE 255
Query: 116 FGQIC 120
F +I
Sbjct: 256 FVRIA 260
>gi|395229190|ref|ZP_10407506.1| dimethyladenosine transferase [Citrobacter sp. A1]
gi|421844680|ref|ZP_16277837.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Citrobacter freundii ATCC 8090 = MTCC 1658]
gi|424729289|ref|ZP_18157891.1| dimethyladenosine transferase [Citrobacter sp. L17]
gi|394717243|gb|EJF22941.1| dimethyladenosine transferase [Citrobacter sp. A1]
gi|411774159|gb|EKS57669.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Citrobacter freundii ATCC 8090 = MTCC 1658]
gi|422896013|gb|EKU35799.1| dimethyladenosine transferase [Citrobacter sp. L17]
gi|455643654|gb|EMF22778.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Citrobacter freundii GTC 09479]
Length = 273
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 59/135 (43%), Gaps = 15/135 (11%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P +P+ D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPAPKVDSAVVRLVPHATMPYPVKDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K V LF V +L V P +R +SV
Sbjct: 208 --RVLSRITTEAFNQRRKTVRNSLGNLFS-------VEVLTELGVDPAMRAENISV---A 255
Query: 118 QICLAYRDMCEEMPG 132
Q C + E P
Sbjct: 256 QYCRMANYLSENAPS 270
>gi|334123493|ref|ZP_08497518.1| dimethyladenosine transferase [Enterobacter hormaechei ATCC 49162]
gi|333390702|gb|EGK61834.1| dimethyladenosine transferase [Enterobacter hormaechei ATCC 49162]
Length = 273
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 59/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P +P+ DL
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHKTMPYPVKDL 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V +L + P +R +SV+++
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLGNLF-------TVDVLAELGIDPAMRAENISVEQYC 258
Query: 118 QIC 120
++
Sbjct: 259 KLA 261
>gi|418039664|ref|ZP_12677921.1| dimethyladenosine transferase [Escherichia coli W26]
gi|383477379|gb|EID69301.1| dimethyladenosine transferase [Escherichia coli W26]
Length = 249
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 57/123 (46%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P HP+ D+
Sbjct: 124 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDV 183
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF +L + P +R +SV ++
Sbjct: 184 --RVLSRITTEAFNQRRKTIRNSLGNLFSAE-------VLTGMGIDPSMRAENISVAQYC 234
Query: 118 QIC 120
Q+
Sbjct: 235 QMA 237
>gi|262377470|ref|ZP_06070692.1| dimethyladenosine transferase [Acinetobacter lwoffii SH145]
gi|262307526|gb|EEY88667.1| dimethyladenosine transferase [Acinetobacter lwoffii SH145]
Length = 270
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 8/117 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPF 59
+ A+ ++ RLS+M Q +C F +P +F P P+V V P +V PI+
Sbjct: 152 ITASPNTKEYGRLSVMIQYFCKPTFLFEVPPGSFNPPPKVTSAVFRLEPYKVKPIVAKNE 211
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
K + R+VS +F R+K + K LV E+A V P+ RP L++++F
Sbjct: 212 KALARLVSHVFTQRRKTLRN-------SLKGMLVEEGFEKAGVDPMARPETLTLEQF 261
>gi|237746914|ref|ZP_04577394.1| dimethyladenosine transferase dimethyltransferase [Oxalobacter
formigenes HOxBLS]
gi|229378265|gb|EEO28356.1| dimethyladenosine transferase dimethyltransferase [Oxalobacter
formigenes HOxBLS]
Length = 256
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 8/120 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
M+A G + RLS+M Q ++D F +P +AF P+P+VD VV P+ +P F
Sbjct: 141 MVAEPGSKAYGRLSVMLQWQYDMDMLFIVPPEAFDPQPKVDSAVVRMIPKENP-EKCSFP 199
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
+E+ V+ F R+K + + F + + L ++P RP +LSV++F ++
Sbjct: 200 ALEKTVTQAFSQRRKMLRNNLAPFFTEAE-------LTGLGIEPTKRPEELSVEQFIRLA 252
>gi|415832384|ref|ZP_11517837.1| dimethyladenosine transferase [Escherichia coli OK1357]
gi|419368322|ref|ZP_13909457.1| dimethyladenosine transferase [Escherichia coli DEC14A]
gi|422776692|ref|ZP_16830346.1| dimethyladenosine transferase [Escherichia coli H120]
gi|323181748|gb|EFZ67161.1| dimethyladenosine transferase [Escherichia coli OK1357]
gi|323945789|gb|EGB41836.1| dimethyladenosine transferase [Escherichia coli H120]
gi|378223553|gb|EHX83772.1| dimethyladenosine transferase [Escherichia coli DEC14A]
Length = 273
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 57/123 (46%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P HP+ D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF +L + P +R +SV ++
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------AEVLTGMGIDPSMRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QMA 261
>gi|387890576|ref|YP_006320874.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Escherichia blattae DSM 4481]
gi|414593763|ref|ZP_11443405.1| ribosomal RNA small subunit methyltransferase A [Escherichia
blattae NBRC 105725]
gi|386925409|gb|AFJ48363.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Escherichia blattae DSM 4481]
gi|403195371|dbj|GAB81057.1| ribosomal RNA small subunit methyltransferase A [Escherichia
blattae NBRC 105725]
Length = 273
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 56/123 (45%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +C V +P AF P P+VD VV P HP+ DL
Sbjct: 148 LVAGPDSKAYGRLSVMAQYYCQVIPVLQVPPSAFTPAPKVDSAVVRLVPHAQLPHPVKDL 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K V LF + L + P +R +SV ++
Sbjct: 208 --RILSRITTEAFNQRRKTVRNSLGNLFSAEQ-------LTALGIDPAMRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QLA 261
>gi|312863719|ref|ZP_07723957.1| dimethyladenosine transferase [Streptococcus vestibularis F0396]
gi|322515990|ref|ZP_08068928.1| dimethyladenosine transferase [Streptococcus vestibularis ATCC
49124]
gi|311101255|gb|EFQ59460.1| dimethyladenosine transferase [Streptococcus vestibularis F0396]
gi|322125525|gb|EFX96866.1| dimethyladenosine transferase [Streptococcus vestibularis ATCC
49124]
Length = 290
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 3/116 (2%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ T R P++++ + RV F
Sbjct: 172 LSIAVQYYMTAKVAFVVPRTVFVPAPNVDSAILKMTRRKQPLVEVKDEDFFFRVSKASFV 231
Query: 72 YRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEFGQICLAYRD 125
+R+K ++ + F K + + + LE A +KP +R LS+ +F ++ A R+
Sbjct: 232 HRRKTLWNNLTSHFGKSEEVKNKLEQALENATIKPSIRGEALSISDFARLSDALRE 287
>gi|401677477|ref|ZP_10809452.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Enterobacter sp. SST3]
gi|401762231|ref|YP_006577238.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Enterobacter cloacae subsp. cloacae ENHKU01]
gi|400173765|gb|AFP68614.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Enterobacter cloacae subsp. cloacae ENHKU01]
gi|400215325|gb|EJO46236.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Enterobacter sp. SST3]
Length = 273
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 60/123 (48%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP---RVHPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P + +P+ DL
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHKTKPYPVKDL 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + S F V +L + P +R +SV+++
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLSNSF-------TVEVLAELGIDPAMRAENISVEQYC 258
Query: 118 QIC 120
++
Sbjct: 259 KLA 261
>gi|422607556|ref|ZP_16679554.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. mori str. 301020]
gi|330891196|gb|EGH23857.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. mori str. 301020]
Length = 268
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 55/123 (44%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
M A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 145 MAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPYETLPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ERVV F R+K + LL L + + V LRP QL + F
Sbjct: 204 -HRVLERVVREAFNQRRKTLRNTLKLL-------LTSDEITASGVDGSLRPEQLDLAAFV 255
Query: 118 QIC 120
++
Sbjct: 256 RLA 258
>gi|402819451|ref|ZP_10869019.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein [alpha
proteobacterium IMCC14465]
gi|402511598|gb|EJW21859.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein [alpha
proteobacterium IMCC14465]
Length = 286
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 7/124 (5%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDH-RFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFKL 61
A G + RLS++ NW H F +P F+P P+V +V PR P+ D +
Sbjct: 167 AQAGEDAYGRLSVLS-NWLAETHIEFDVPADVFVPPPKVTSAIVSLVPRERPLADADLAV 225
Query: 62 IERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQICL 121
+E+V + F R+K + ASL K+ + ++L + P R L+++EF +
Sbjct: 226 LEKVTAAAFGQRRKMLR--ASL---KQITKDAENVLISCDIDPTRRAETLTIEEFCALSR 280
Query: 122 AYRD 125
A +D
Sbjct: 281 ALKD 284
>gi|347755376|ref|YP_004862940.1| dimethyladenosine transferase [Candidatus Chloracidobacterium
thermophilum B]
gi|347587894|gb|AEP12424.1| dimethyladenosine transferase [Candidatus Chloracidobacterium
thermophilum B]
Length = 291
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 60/123 (48%), Gaps = 7/123 (5%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G + S++ Q C V F +P AF P P+V VV TPR P+ +P +
Sbjct: 156 LAAAPGTKDYGYFSVVVQAACEVTRLFDVPPGAFHPPPKVMSSVVRLTPR--PVAIMPPE 213
Query: 61 LIE---RVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
L+ RVVS F R+K + SL+ R ++ L RA + P RP LSV+ F
Sbjct: 214 LMPYFCRVVSVAFEQRRKMLG--GSLMRLGLSRTDLLEGLARAGIAPERRPETLSVETFV 271
Query: 118 QIC 120
+I
Sbjct: 272 RIA 274
>gi|403382814|ref|ZP_10924871.1| dimethyladenosine transferase [Paenibacillus sp. JC66]
Length = 294
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 2/122 (1%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
M A+ G ++ LSI Q +C +P +AF+P+P VD V+ R P +D+ +
Sbjct: 166 MTASPGGKEYGSLSIAVQYYCEPSVELIVPRQAFVPQPNVDSAVIKLKVREKPPVDVDDE 225
Query: 61 -LIERVVSCIFRYRQKQVYKP-ASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQ 118
+VV F R+K + F K +R+L+ S+L + P R LS++E+
Sbjct: 226 AFFFKVVQASFGQRRKTIANNLLGSFFQKGQRELLESILHSLSIDPTRRGETLSLEEYAL 285
Query: 119 IC 120
+
Sbjct: 286 LS 287
>gi|89094173|ref|ZP_01167116.1| dimethyladenosine transferase [Neptuniibacter caesariensis]
gi|89081648|gb|EAR60877.1| dimethyladenosine transferase [Oceanospirillum sp. MED92]
Length = 268
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 54/121 (44%), Gaps = 8/121 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPF 59
M A G RL IM Q +C V+ F +P AF P P+VD ++ TP R P +
Sbjct: 147 MAAGPGENNYGRLGIMAQYFCKVESLFVVPPGAFNPAPKVDSAIIRLTPYRELPYVADEV 206
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
+ ++ VV F R+K + K L +E + P LRP +L + +F I
Sbjct: 207 EQLQTVVRTAFNMRRKTLRN-------NLKPLLSAEEIEALNIDPGLRPEKLPISDFVAI 259
Query: 120 C 120
Sbjct: 260 S 260
>gi|254504321|ref|ZP_05116472.1| dimethyladenosine transferase [Labrenzia alexandrii DFL-11]
gi|222440392|gb|EEE47071.1| dimethyladenosine transferase [Labrenzia alexandrii DFL-11]
Length = 283
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 55/118 (46%), Gaps = 10/118 (8%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G + RL ++ CN F I KAF P P+V VVH TP P LP
Sbjct: 161 IAAAPGSKAYGRLGVLAGWRCNGGILFDISPKAFTPPPKVTSAVVHLTPNPAP---LPCN 217
Query: 61 L--IERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
L +E++ + F R+K + L P +R L+E+A +KP R ++ + F
Sbjct: 218 LSSLEKLTAAAFGQRRKMLRASLKSLSPDAER-----LIEKAGLKPTARAEEIDIAGF 270
>gi|365968966|ref|YP_004950527.1| ribosomal RNA small subunit methyltransferase A [Enterobacter
cloacae EcWSU1]
gi|365747879|gb|AEW72106.1| Ribosomal RNA small subunit methyltransferase A [Enterobacter
cloacae EcWSU1]
Length = 273
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A + RLS+M Q +CNV +P AF P P+VD VV P H I+ P K
Sbjct: 148 LVAGPNSKAYGRLSVMAQYFCNVIPVLEVPPTAFTPPPKVDSAVVRLVP--HKIMPYPVK 205
Query: 61 ---LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
++ R+ + F R+K + LF V +L + P +R +SV+++
Sbjct: 206 DLRVLSRITTEAFNQRRKTIRNSLGNLF-------TVEVLTELGIDPAMRAENISVEQYC 258
Query: 118 QIC 120
++
Sbjct: 259 KLA 261
>gi|237729348|ref|ZP_04559829.1| dimethyladenosine transferase [Citrobacter sp. 30_2]
gi|365103981|ref|ZP_09333642.1| ribosomal RNA small subunit methyltransferase A [Citrobacter
freundii 4_7_47CFAA]
gi|226909077|gb|EEH94995.1| dimethyladenosine transferase [Citrobacter sp. 30_2]
gi|363644594|gb|EHL83875.1| ribosomal RNA small subunit methyltransferase A [Citrobacter
freundii 4_7_47CFAA]
Length = 273
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 59/135 (43%), Gaps = 15/135 (11%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P +P+ D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPAPKVDSAVVRLVPHTTMPYPVKDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K V LF V +L + P +R +SV
Sbjct: 208 --RVLSRITTEAFNQRRKTVRNSLGNLFS-------VEVLTELGIDPAMRAENISV---A 255
Query: 118 QICLAYRDMCEEMPG 132
Q C + E P
Sbjct: 256 QYCRMANYLSENAPS 270
>gi|418941019|ref|ZP_13494361.1| Ribosomal RNA small subunit methyltransferase A [Rhizobium sp.
PDO1-076]
gi|375052324|gb|EHS48731.1| Ribosomal RNA small subunit methyltransferase A [Rhizobium sp.
PDO1-076]
Length = 275
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 58/120 (48%), Gaps = 16/120 (13%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDH-RFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF 59
++A E RL ++C W H F +P +AF P P+V VVH TPR++P+ P
Sbjct: 161 IVANEDDNHYGRLGVLC-GWRTESHMAFDLPPQAFTPPPKVTSTVVHLTPRLNPLPCDPD 219
Query: 60 KLIERVVSCIFRYRQK---QVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
KL E+V F R+K Q KP +LL +A + P R LSV+EF
Sbjct: 220 KL-EKVTMAAFGQRRKMLRQSLKPVG----------GEALLAKADIDPKRRAETLSVEEF 268
>gi|296101215|ref|YP_003611361.1| dimethyladenosine transferase [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|295055674|gb|ADF60412.1| dimethyladenosine transferase [Enterobacter cloacae subsp. cloacae
ATCC 13047]
Length = 273
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 59/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P +P+ DL
Sbjct: 148 LVAGPNSKAYGRLSVMAQYFCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHKTMPYPVKDL 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V +L + P +R +SV+++
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLGNLF-------TVDVLAELGIDPAMRAENISVEQYC 258
Query: 118 QIC 120
++
Sbjct: 259 KLA 261
>gi|392977558|ref|YP_006476146.1| KsgA/Dim1 family 16S ribosomal RNA methyltransferase [Enterobacter
cloacae subsp. dissolvens SDM]
gi|392323491|gb|AFM58444.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Enterobacter cloacae subsp. dissolvens SDM]
Length = 273
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 59/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P +P+ DL
Sbjct: 148 LVAGPNSKAYGRLSVMAQYFCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHKTMPYPVKDL 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V +L + P +R +SV+++
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLGNLF-------TVDVLAELGIDPAMRAENISVEQYC 258
Query: 118 QIC 120
++
Sbjct: 259 KLA 261
>gi|402756881|ref|ZP_10859137.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Acinetobacter sp. NCTC 7422]
Length = 270
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 55/117 (47%), Gaps = 8/117 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPF 59
+ AT ++ RLS+M Q +C F +P +F P P+V V P V PI+
Sbjct: 152 ITATPNTKEYGRLSVMIQYYCKPTFLFEVPPGSFNPPPKVTSAVFRLEPYDVKPIVAKNE 211
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
K + R+V +F R+K + K LV E+A V P+ RP LS+ +F
Sbjct: 212 KALARLVGHVFTQRRKTLRN-------SLKGMLVEDGFEKAGVDPMARPETLSLADF 261
>gi|283835115|ref|ZP_06354856.1| dimethyladenosine transferase [Citrobacter youngae ATCC 29220]
gi|291069414|gb|EFE07523.1| dimethyladenosine transferase [Citrobacter youngae ATCC 29220]
Length = 273
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 59/135 (43%), Gaps = 15/135 (11%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P +P+ D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPAPKVDSAVVRLVPHATMPYPVKDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K V LF V +L + P +R +SV
Sbjct: 208 --RVLSRITTEAFNQRRKTVRNSLGNLFS-------VEVLTELGIDPAMRAENISV---A 255
Query: 118 QICLAYRDMCEEMPG 132
Q C + E P
Sbjct: 256 QYCRMANYLSENAPS 270
>gi|71735918|ref|YP_272932.1| dimethyladenosine transferase [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|257483106|ref|ZP_05637147.1| dimethyladenosine transferase [Pseudomonas syringae pv. tabaci str.
ATCC 11528]
gi|416014380|ref|ZP_11562207.1| dimethyladenosine transferase [Pseudomonas syringae pv. glycinea
str. B076]
gi|416021882|ref|ZP_11567173.1| dimethyladenosine transferase [Pseudomonas syringae pv. glycinea
str. race 4]
gi|422406489|ref|ZP_16483517.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. glycinea str. race 4]
gi|422595492|ref|ZP_16669779.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. lachrymans str. M301315]
gi|422682321|ref|ZP_16740587.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. tabaci str. ATCC 11528]
gi|118600884|sp|Q48NT7.1|RSMA_PSE14 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|71556471|gb|AAZ35682.1| dimethyladenosine transferase [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|320326009|gb|EFW82067.1| dimethyladenosine transferase [Pseudomonas syringae pv. glycinea
str. B076]
gi|320332056|gb|EFW87992.1| dimethyladenosine transferase [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330881716|gb|EGH15865.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. glycinea str. race 4]
gi|330985796|gb|EGH83899.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. lachrymans str. M301315]
gi|331011661|gb|EGH91717.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. tabaci str. ATCC 11528]
Length = 268
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 55/123 (44%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
M A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 145 MAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPYETLPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ERVV F R+K + LL + + + V LRP QL + F
Sbjct: 204 -HRVLERVVREAFNQRRKTLRNTLKLLLSSDE-------ITASGVDGSLRPEQLDLAAFV 255
Query: 118 QIC 120
++
Sbjct: 256 RLA 258
>gi|422296567|ref|ZP_16384234.1| dimethyladenosine transferase [Pseudomonas avellanae BPIC 631]
gi|407992251|gb|EKG33924.1| dimethyladenosine transferase [Pseudomonas avellanae BPIC 631]
Length = 268
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 55/123 (44%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
M A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 145 MAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPYETLPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ERVV F R+K + LL + + + V LRP QL + F
Sbjct: 204 -HRVLERVVREAFNQRRKTLRNTLKLLLSSDE-------ITASGVDGSLRPEQLDLAAFV 255
Query: 118 QIC 120
++
Sbjct: 256 RLA 258
>gi|420369547|ref|ZP_14870240.1| dimethyladenosine transferase [Shigella flexneri 1235-66]
gi|391321114|gb|EIQ77869.1| dimethyladenosine transferase [Shigella flexneri 1235-66]
Length = 273
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 59/135 (43%), Gaps = 15/135 (11%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P +P+ D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPAPKVDSAVVRLVPHATMPYPVKDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K V LF V +L + P +R +SV
Sbjct: 208 --RVLSRITTEAFNQRRKTVRNSLGNLFS-------VEVLTELGIDPAMRAENISV---A 255
Query: 118 QICLAYRDMCEEMPG 132
Q C + E P
Sbjct: 256 QYCRMANYLSENAPS 270
>gi|415883935|ref|ZP_11545964.1| dimethyladenosine transferase [Bacillus methanolicus MGA3]
gi|387591730|gb|EIJ84047.1| dimethyladenosine transferase [Bacillus methanolicus MGA3]
Length = 292
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 58/121 (47%), Gaps = 3/121 (2%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPR-VHPIIDLPFKL 61
A G + LSI Q + D +P F+P+P VD V+ T R V P+
Sbjct: 164 AKPGSKDYGSLSIAVQYYTEPDTVMVVPKTVFVPQPNVDSAVIRLTRREVAPVKVRDEAF 223
Query: 62 IERVVSCIFRYRQKQVYKPASLLFP--KRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
+V+ F +R+K + + P K K++ +++ L +A + P R LS++EFG++
Sbjct: 224 FFQVIKASFAHRRKTLLNNLTSQLPNGKEKKEAILAALNQAGIDPGRRGETLSIEEFGRL 283
Query: 120 C 120
Sbjct: 284 S 284
>gi|421766424|ref|ZP_16203198.1| Dimethyladenosine transferase [Lactococcus garvieae DCC43]
gi|407625192|gb|EKF51907.1| Dimethyladenosine transferase [Lactococcus garvieae DCC43]
Length = 295
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 9/115 (7%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPII-----DLPFKLIERVVS 67
LSI Q + FT+P F+P P VD ++ T R P++ D FK +
Sbjct: 178 LSIAVQYYMEAQVAFTVPRTVFVPAPNVDSAILKMTRREQPLVAVKDEDFFFK----TMH 233
Query: 68 CIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQICLA 122
F +R+K + F K K+ + LL A + P +R LS+ EF ++ A
Sbjct: 234 STFVHRRKTLMNNLQSAFGKDKKPQITELLAEAEISPTIRAEALSIPEFARLADA 288
>gi|238795194|ref|ZP_04638781.1| Dimethyladenosine transferase [Yersinia intermedia ATCC 29909]
gi|238725481|gb|EEQ17048.1| Dimethyladenosine transferase [Yersinia intermedia ATCC 29909]
Length = 232
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RL++M Q +CNV +P AF P P+VD VV P V +P+ D+
Sbjct: 108 LVAGPNSKAYGRLTVMAQYYCNVIPVLEVPPTAFTPAPKVDSAVVRLIPHVNMPNPVGDV 167
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ RV + F R+K V LF + L+E + PILR +SV ++
Sbjct: 168 --RMLSRVTTQAFNQRRKTVRNSLGDLFTPEQ------LIELG-IDPILRAENISVAQYC 218
Query: 118 QIC 120
++
Sbjct: 219 KLA 221
>gi|420144739|ref|ZP_14652227.1| Ribosomal RNA small subunit methyltransferase A [Lactococcus
garvieae IPLA 31405]
gi|391856191|gb|EIT66740.1| Ribosomal RNA small subunit methyltransferase A [Lactococcus
garvieae IPLA 31405]
Length = 296
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 9/115 (7%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPII-----DLPFKLIERVVS 67
LSI Q + FT+P F+P P VD ++ T R P++ D FK +
Sbjct: 178 LSIAVQYYMEAQVAFTVPRTVFVPAPNVDSAILKMTRREQPLVAVKDEDFFFK----TMH 233
Query: 68 CIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQICLA 122
F +R+K + F K K+ + LL ++ + P +R LS+ EF ++ A
Sbjct: 234 STFVHRRKTLMNNLQSAFGKDKKPQITELLAQSDISPTIRAEALSIPEFARLADA 288
>gi|28867779|ref|NP_790398.1| dimethyladenosine transferase [Pseudomonas syringae pv. tomato str.
DC3000]
gi|422659008|ref|ZP_16721438.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. lachrymans str. M302278]
gi|33516927|sp|Q88A46.1|RSMA_PSESM RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|28851014|gb|AAO54093.1| dimethyladenosine transferase [Pseudomonas syringae pv. tomato str.
DC3000]
gi|331017631|gb|EGH97687.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. lachrymans str. M302278]
Length = 268
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 55/123 (44%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
M A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 145 MAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPYETLPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ERVV F R+K + LL + + + V LRP QL + F
Sbjct: 204 -HRVLERVVREAFNQRRKTLRNTLKLLLSSDE-------ITASGVDGSLRPEQLDLAAFV 255
Query: 118 QIC 120
++
Sbjct: 256 RLA 258
>gi|374851883|dbj|BAL54830.1| dimethyladenosine transferase [uncultured candidate division OP1
bacterium]
gi|374855735|dbj|BAL58590.1| dimethyladenosine transferase [uncultured candidate division OP1
bacterium]
Length = 293
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 58/130 (44%), Gaps = 7/130 (5%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFKLI 62
AT G ++I Q + V F++ F PKP+VD +V HP P +L
Sbjct: 157 ATPGTRDASAITIFVQGFAAVHKLFSVSRNVFFPKPEVDSALVRLEFYEHPKFRAPEELF 216
Query: 63 ERVVSCIFRYRQKQVYKPAS----LLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQ 118
RVV F R+K + + L P +LV+ L+ A + P R LS++EF +
Sbjct: 217 LRVVRAAFNLRRKTIKHALTRSPLLALP---HELVLEALQHAQIDPQRRGETLSLEEFDK 273
Query: 119 ICLAYRDMCE 128
+ A + E
Sbjct: 274 VAQALARLRE 283
>gi|213967675|ref|ZP_03395822.1| dimethyladenosine transferase [Pseudomonas syringae pv. tomato T1]
gi|301382735|ref|ZP_07231153.1| dimethyladenosine transferase [Pseudomonas syringae pv. tomato
Max13]
gi|302063470|ref|ZP_07255011.1| dimethyladenosine transferase [Pseudomonas syringae pv. tomato K40]
gi|213927451|gb|EEB60999.1| dimethyladenosine transferase [Pseudomonas syringae pv. tomato T1]
Length = 268
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 55/123 (44%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
M A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 145 MAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPYETLPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ERVV F R+K + LL + + + V LRP QL + F
Sbjct: 204 -HRVLERVVREAFNQRRKTLRNTLKLLLSSDE-------ITASGVDGSLRPEQLDLAAFV 255
Query: 118 QIC 120
++
Sbjct: 256 RLA 258
>gi|302130722|ref|ZP_07256712.1| dimethyladenosine transferase [Pseudomonas syringae pv. tomato
NCPPB 1108]
Length = 268
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 55/123 (44%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
M A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 145 MAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPYETLPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ERVV F R+K + LL + + + V LRP QL + F
Sbjct: 204 -HRVLERVVREAFNQRRKTLRNTLKLLLSSDE-------ITASGVDGSLRPEQLDLAAFV 255
Query: 118 QIC 120
++
Sbjct: 256 RLA 258
>gi|420244631|ref|ZP_14748383.1| dimethyladenosine transferase [Rhizobium sp. CF080]
gi|398052805|gb|EJL45044.1| dimethyladenosine transferase [Rhizobium sp. CF080]
Length = 277
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 57/118 (48%), Gaps = 12/118 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A E + RL ++ + F +P +AF P P+V VVH TPR HP LP
Sbjct: 163 IVADEEDDHYGRLGVLAGWRTDAHMVFDVPPQAFTPPPKVTSTVVHLTPRTHP---LPCD 219
Query: 61 L--IERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+ +ERV F R+K + + L + +LL +A + P R LSV+EF
Sbjct: 220 VTKLERVTHAAFGQRRKMLRQSVKSLGGE-------ALLVKAGIDPARRAETLSVEEF 270
>gi|440744084|ref|ZP_20923390.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae BRIP39023]
gi|440374540|gb|ELQ11268.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae BRIP39023]
Length = 268
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 55/123 (44%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
M A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 145 MAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPYETLPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ER+V F R+K + LL L + + V LRP QL + F
Sbjct: 204 -HRVLERIVREAFNQRRKTLRNTLKLL-------LTSDEITASGVDGSLRPEQLDLAAFV 255
Query: 118 QIC 120
++
Sbjct: 256 RLA 258
>gi|298291091|ref|YP_003693030.1| dimethyladenosine transferase [Starkeya novella DSM 506]
gi|296927602|gb|ADH88411.1| dimethyladenosine transferase [Starkeya novella DSM 506]
Length = 283
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 10/128 (7%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLP-- 58
++A G + RL+++ N F +P AF+P P+V VVH PR P LP
Sbjct: 161 IVAASGSDHYGRLAVLTGWRANARIAFDVPASAFVPPPKVTSSVVHIVPREKP---LPCE 217
Query: 59 FKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQ 118
K +E+V F R+K + + L + LL A ++P R ++ V+ F
Sbjct: 218 LKALEKVTEAAFGQRRKMLRQSLKSLGVDAGK-----LLAAAGIEPTERAERIPVEGFVA 272
Query: 119 ICLAYRDM 126
+ A++ M
Sbjct: 273 LANAWKAM 280
>gi|226946690|ref|YP_002801763.1| dimethyladenosine transferase [Azotobacter vinelandii DJ]
gi|226721617|gb|ACO80788.1| dimethyladenosine transferase [Azotobacter vinelandii DJ]
Length = 272
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 57/132 (43%), Gaps = 12/132 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 145 LAAEPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPHETLPHPARDP 204
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
L+ER+V F R+K + K L + +E A V LRP QL + F
Sbjct: 205 --ALLERIVREAFNQRRKTLRNTL-------KGLLAATDIEAAGVDGSLRPEQLDLAAFV 255
Query: 118 QICLAYRDMCEE 129
++ EE
Sbjct: 256 RLADHLHARTEE 267
>gi|406945530|gb|EKD76992.1| hypothetical protein ACD_42C00508G0002 [uncultured bacterium]
Length = 260
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 59/121 (48%), Gaps = 8/121 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHP-IIDLPF 59
+ A G RLS+M Q +C+ D+ T+P AF P P+V+ V+ P+ + + F
Sbjct: 141 LTAKVGTRDYGRLSVMSQYFCDNDYLLTVPPTAFDPPPKVESAVIRLVPKKQARLSEKQF 200
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
L VV F YR+K++ L K +SLL+ + P RP ++V EF +I
Sbjct: 201 ALFSAVVKEAFNYRRKKLGNCLKRLIDPHK----LSLLD---IDPDTRPQNVTVTEFIRI 253
Query: 120 C 120
Sbjct: 254 S 254
>gi|300715279|ref|YP_003740082.1| Dimethyladenosine transferase [Erwinia billingiae Eb661]
gi|299061115|emb|CAX58222.1| Dimethyladenosine transferase [Erwinia billingiae Eb661]
Length = 279
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 60/123 (48%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A G + RL++M Q +C V +P ++F P P+VD VV P HP+ D+
Sbjct: 148 LVAGPGSKAYGRLTVMAQYYCQVIPVLEVPPESFTPAPKVDSAVVRLMPHAKIEHPVTDM 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF + +L+ + P LR ++V ++
Sbjct: 208 --RVLTRITTEAFGKRRKTLRNSLGHLFS-------LEVLQEMNIDPTLRAENITVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QLA 261
>gi|399043141|ref|ZP_10737566.1| dimethyladenosine transferase [Rhizobium sp. CF122]
gi|398058388|gb|EJL50286.1| dimethyladenosine transferase [Rhizobium sp. CF122]
Length = 275
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 55/116 (47%), Gaps = 8/116 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++ATE + RL ++C N F IP +AF P P+V VVH TP +P I
Sbjct: 161 VVATEDDDHYGRLGVLCGWRTNARMAFDIPPQAFTPPPKVTSTVVHLTPNENP-IPCSVT 219
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+E+V F R+K + + L + +LL +A V P R LSV EF
Sbjct: 220 DLEKVTHAAFGQRRKMLRQSLKPLGGE-------ALLNKADVDPQRRAETLSVAEF 268
>gi|289676165|ref|ZP_06497055.1| dimethyladenosine transferase [Pseudomonas syringae pv. syringae
FF5]
gi|440721016|ref|ZP_20901426.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae BRIP34876]
gi|440727217|ref|ZP_20907456.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae BRIP34881]
gi|443641949|ref|ZP_21125799.1| Dimethyladenosine transferase [Pseudomonas syringae pv. syringae
B64]
gi|440364411|gb|ELQ01543.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae BRIP34881]
gi|440364789|gb|ELQ01911.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae BRIP34876]
gi|443281966|gb|ELS40971.1| Dimethyladenosine transferase [Pseudomonas syringae pv. syringae
B64]
Length = 268
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 55/123 (44%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
M A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 145 MAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPYETLPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ER+V F R+K + LL L + + V LRP QL + F
Sbjct: 204 -HRVLERIVREAFNQRRKTLRNTLKLL-------LTSDEITASGVDGSLRPEQLDLAAFV 255
Query: 118 QIC 120
++
Sbjct: 256 RLA 258
>gi|66047854|ref|YP_237695.1| dimethyladenosine transferase [Pseudomonas syringae pv. syringae
B728a]
gi|75500351|sp|Q4ZMG5.1|RSMA_PSEU2 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|63258561|gb|AAY39657.1| dimethyladenosine transferase [Pseudomonas syringae pv. syringae
B728a]
Length = 268
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 55/123 (44%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
M A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 145 MAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPYETLPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ER+V F R+K + LL L + + V LRP QL + F
Sbjct: 204 -HRVLERIVREAFNQRRKTLRNTLKLL-------LTSDEITASGVDGSLRPEQLDLAAFV 255
Query: 118 QIC 120
++
Sbjct: 256 RLA 258
>gi|298160150|gb|EFI01179.1| Dimethyladenosine transferase [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
Length = 268
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 55/123 (44%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
M A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 145 MAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPYETLPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ER+V F R+K + LL L + + V LRP QL + F
Sbjct: 204 -HRVLERIVREAFNQRRKTLRNTLKLL-------LTSDEITASGVDGSLRPEQLDLAAFV 255
Query: 118 QIC 120
++
Sbjct: 256 RLA 258
>gi|289649007|ref|ZP_06480350.1| dimethyladenosine transferase [Pseudomonas syringae pv. aesculi
str. 2250]
Length = 268
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 55/123 (44%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
M A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 145 MAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPYETLPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ER+V F R+K + LL L + + V LRP QL + F
Sbjct: 204 -HRVLERIVREAFNQRRKTLRNTLKLL-------LTSDEITASGVDGSLRPEQLDLAAFV 255
Query: 118 QIC 120
++
Sbjct: 256 RLA 258
>gi|238758993|ref|ZP_04620164.1| Dimethyladenosine transferase [Yersinia aldovae ATCC 35236]
gi|238702804|gb|EEP95350.1| Dimethyladenosine transferase [Yersinia aldovae ATCC 35236]
Length = 232
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RL++M Q +CNV +P AF P P+VD VV P V +P+ D+
Sbjct: 108 LVAGPNSKAYGRLTVMAQYYCNVIPVLEVPPTAFTPAPKVDSAVVRLIPHVNMPNPVGDV 167
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K V LF + L+E + PILR +SV ++
Sbjct: 168 --RMLTRITTQAFNQRRKTVRNSLGDLFTSEQ------LIELG-IDPILRAENISVAQYC 218
Query: 118 QIC 120
++
Sbjct: 219 KLA 221
>gi|424068226|ref|ZP_17805682.1| dimethyladenosine transferase [Pseudomonas syringae pv. avellanae
str. ISPaVe013]
gi|407998608|gb|EKG39012.1| dimethyladenosine transferase [Pseudomonas syringae pv. avellanae
str. ISPaVe013]
Length = 268
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 55/123 (44%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
M A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 145 MAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPYETLPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ER+V F R+K + LL L + + V LRP QL + F
Sbjct: 204 -HRVLERIVREAFNQRRKTLRNTLKLL-------LTSDEITASGVDGSLRPEQLDLAAFV 255
Query: 118 QIC 120
++
Sbjct: 256 RLA 258
>gi|283783840|ref|YP_003363705.1| dimethyladenosine transferase
(S-adenosylmethionine-6-N',N'-adenosyl (rRNA)
dimethyltransferase) [Citrobacter rodentium ICC168]
gi|282947294|emb|CBG86839.1| dimethyladenosine transferase
(S-adenosylmethionine-6-N',N'-adenosyl (rRNA)
dimethyltransferase) [Citrobacter rodentium ICC168]
Length = 273
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 59/134 (44%), Gaps = 15/134 (11%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P +P+ D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPYPVKDI 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V +L V P +R +SV
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VEVLTELGVDPAMRAENISV---A 255
Query: 118 QICLAYRDMCEEMP 131
Q C + E P
Sbjct: 256 QYCRMANYLAENAP 269
>gi|424074235|ref|ZP_17811645.1| dimethyladenosine transferase [Pseudomonas syringae pv. avellanae
str. ISPaVe037]
gi|407994740|gb|EKG35299.1| dimethyladenosine transferase [Pseudomonas syringae pv. avellanae
str. ISPaVe037]
Length = 268
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 55/123 (44%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
M A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 145 MAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPYETLPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ER+V F R+K + LL L + + V LRP QL + F
Sbjct: 204 -HRVLERIVREAFNQRRKTLRNTLKLL-------LTSDEITASGVDGSLRPEQLDLAAFV 255
Query: 118 QIC 120
++
Sbjct: 256 RLA 258
>gi|422673107|ref|ZP_16732468.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. aceris str. M302273]
gi|330970842|gb|EGH70908.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. aceris str. M302273]
Length = 268
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 55/123 (44%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
M A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 145 MAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPYETLPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ER+V F R+K + LL L + + V LRP QL + F
Sbjct: 204 -HRVLERIVREAFNQRRKTLRNTLKLL-------LTSDEITASGVDGSLRPEQLDLAAFV 255
Query: 118 QIC 120
++
Sbjct: 256 RLA 258
>gi|238752274|ref|ZP_04613754.1| Dimethyladenosine transferase [Yersinia rohdei ATCC 43380]
gi|238709542|gb|EEQ01780.1| Dimethyladenosine transferase [Yersinia rohdei ATCC 43380]
Length = 222
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RL++M Q +CNV +P AF P P+VD VV P V +P+ D+
Sbjct: 98 LVAGPNSKAYGRLTVMAQYYCNVIPVLEVPPTAFTPAPKVDSAVVRLIPHVQMPNPVGDV 157
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K V LF + L+E + PILR +SV ++
Sbjct: 158 --RMLSRITTQAFNQRRKTVRNSLGDLFTAEQ------LIELG-IDPILRAENISVAQYC 208
Query: 118 QIC 120
++
Sbjct: 209 KLA 211
>gi|209548666|ref|YP_002280583.1| dimethyladenosine transferase [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|226732614|sp|B5ZWD8.1|RSMA_RHILW RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|209534422|gb|ACI54357.1| dimethyladenosine transferase [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 275
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 56/116 (48%), Gaps = 8/116 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A+E + RL ++C F +P +AF P P+V VVH TPR +P I
Sbjct: 161 IVASEDDDHYGRLGVLCGWRTQTRMAFDVPPQAFTPPPKVTSTVVHLTPRENP-IPCAVG 219
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+E+V F R+K + + L +R LL +A + P R LSV+EF
Sbjct: 220 DLEKVTQAAFGQRRKMLRQSLKPLGGER-------LLVKAGIDPARRAETLSVEEF 268
>gi|218547501|ref|YP_002381292.1| dimethyladenosine transferase [Escherichia fergusonii ATCC 35469]
gi|226732582|sp|B7LVU5.1|RSMA_ESCF3 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|218355042|emb|CAQ87648.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Escherichia fergusonii ATCC 35469]
Length = 273
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P +P+ D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPYPVKDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V +L + P +R +SV ++
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VEVLTGMGIDPAMRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QMA 261
>gi|366159501|ref|ZP_09459363.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia sp. TW09308]
gi|432374981|ref|ZP_19618004.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE11]
gi|430892239|gb|ELC14731.1| ribosomal RNA small subunit methyltransferase A [Escherichia coli
KTE11]
Length = 273
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P +P+ D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPYPVKDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V +L + P +R +SV ++
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VEVLTGMGIDPAMRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QMA 261
>gi|343498205|ref|ZP_08736244.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Vibrio tubiashii ATCC 19109]
gi|418477547|ref|ZP_13046675.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Vibrio tubiashii NCIMB 1337 = ATCC 19106]
gi|342824646|gb|EGU59181.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Vibrio tubiashii ATCC 19109]
gi|384574812|gb|EIF05271.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Vibrio tubiashii NCIMB 1337 = ATCC 19106]
Length = 268
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 57/119 (47%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G + RL++M Q +C V +P AF+P P+VD VV P HP+ L
Sbjct: 147 LAAGPGTKAYGRLTVMAQYFCKVVPVLEVPPTAFVPPPKVDSAVVRLVPYEEIPHPVTSL 206
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
K ++RV F R+K V L L +LE+ V P +RP L++++F
Sbjct: 207 --KWLDRVCREGFNQRRKTVRNCYKAL-------LSAEILEQLGVNPSMRPENLTLEQF 256
>gi|337269692|ref|YP_004613747.1| dimethyladenosine transferase [Mesorhizobium opportunistum WSM2075]
gi|336030002|gb|AEH89653.1| dimethyladenosine transferase [Mesorhizobium opportunistum WSM2075]
Length = 274
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 53/116 (45%), Gaps = 8/116 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A G + RL ++ F +P +AF P P+V VVH PR P + K
Sbjct: 160 IVAAPGSDAYGRLGVLAGWRTQARIAFDVPPQAFTPPPKVTSSVVHLEPRATP-LPADVK 218
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+ RV F R+K + + L + +LLERA + P R LSV+EF
Sbjct: 219 KLGRVTEAAFGQRRKMLRQSVKSLGGE-------TLLERAGIDPTRRAETLSVEEF 267
>gi|337751810|ref|YP_004645972.1| protein RsmA [Paenibacillus mucilaginosus KNP414]
gi|379724747|ref|YP_005316878.1| protein RsmA [Paenibacillus mucilaginosus 3016]
gi|336302999|gb|AEI46102.1| RsmA [Paenibacillus mucilaginosus KNP414]
gi|378573419|gb|AFC33729.1| RsmA [Paenibacillus mucilaginosus 3016]
Length = 305
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 2/122 (1%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
M A G ++ LSI Q +C + +P FIP+P VD V+ R P +D+ +
Sbjct: 172 MAAGPGGKEYGSLSIAVQYYCEPEIVAIVPHTVFIPQPNVDSAVIKLKVRQQPPVDVEDE 231
Query: 61 -LIERVVSCIFRYRQKQVYKPASL-LFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQ 118
V+ F R+K +Y S F K + + LL A ++P R LS+QE+ +
Sbjct: 232 DFFFDVIQASFTQRRKTIYNNLSAKYFTKENKGELEGLLREAGIEPSRRGETLSMQEYAE 291
Query: 119 IC 120
+
Sbjct: 292 LS 293
>gi|338707019|ref|YP_004661220.1| dimethyladenosine transferase [Zymomonas mobilis subsp. pomaceae
ATCC 29192]
gi|336293823|gb|AEI36930.1| dimethyladenosine transferase [Zymomonas mobilis subsp. pomaceae
ATCC 29192]
Length = 282
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 56/120 (46%), Gaps = 7/120 (5%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G E RLS++ Q FT+ AF+P P+V +VH TP+ P
Sbjct: 159 ITAKVGSEHYGRLSVLAQWRSQAKLSFTVHRSAFVPPPKVTSAIVHLTPKAQP-EQTSLA 217
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
+E+V + F R+K + + SL + + + LE ++ RP LSV+EF I
Sbjct: 218 TLEKVTAAAFNQRRKMLRQ--SL----KNTEGAMEALEAIGIESSRRPETLSVEEFVAIA 271
>gi|359780754|ref|ZP_09283979.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas psychrotolerans L19]
gi|359370814|gb|EHK71380.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas psychrotolerans L19]
Length = 263
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 55/121 (45%), Gaps = 8/121 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV-HPIIDLPF 59
+ A G RLSIM Q C V+H F + AF P P+VD +V P P +
Sbjct: 144 LAAVPGNGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPHTERPHVARDP 203
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
L+ERVV F R+K + K L + +E A V P LRP QL + + ++
Sbjct: 204 VLLERVVREAFGQRRKTLRNTL-------KGTLDSAAIEAADVDPGLRPEQLDLAAYVRL 256
Query: 120 C 120
Sbjct: 257 A 257
>gi|426234990|ref|XP_004011474.1| PREDICTED: mitochondrial dimethyladenosine transferase 1-like [Ovis
aries]
Length = 226
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQ 39
+ AT G +QR RLSIM Q C+V H TIPG+AF+PKP+
Sbjct: 184 LTATTGSKQRSRLSIMAQYLCDVQHILTIPGQAFVPKPE 222
>gi|116004017|ref|NP_001070364.1| mitochondrial dimethyladenosine transferase 1 isoform 2 [Bos
taurus]
gi|83638584|gb|AAI09842.1| Transcription factor B1, mitochondrial [Bos taurus]
gi|296483883|tpg|DAA25998.1| TPA: mitochondrial dimethyladenosine transferase 1 isoform 2 [Bos
taurus]
Length = 226
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQ 39
+ AT G +QR RLSIM Q C+V H TIPG+AF+PKP+
Sbjct: 184 LTATTGSKQRSRLSIMAQYLCDVQHILTIPGQAFVPKPE 222
>gi|302185943|ref|ZP_07262616.1| dimethyladenosine transferase [Pseudomonas syringae pv. syringae
642]
Length = 268
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 55/123 (44%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
M A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 145 MAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPYETLPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ER+V F R+K + LL + + + V LRP QL + F
Sbjct: 204 -HRVLERIVREAFNQRRKTLRNTLKLLLSSDE-------ITASGVDGSLRPEQLDLAAFV 255
Query: 118 QIC 120
++
Sbjct: 256 RLA 258
>gi|386727501|ref|YP_006193827.1| protein RsmA [Paenibacillus mucilaginosus K02]
gi|384094626|gb|AFH66062.1| protein RsmA [Paenibacillus mucilaginosus K02]
Length = 305
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 2/122 (1%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
M A G ++ LSI Q +C + +P FIP+P VD V+ R P +D+ +
Sbjct: 172 MAAGPGGKEYGSLSIAVQYYCEPEIVAIVPHTVFIPQPNVDSAVIKLKVRQQPPVDVEDE 231
Query: 61 -LIERVVSCIFRYRQKQVYKPASL-LFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQ 118
V+ F R+K +Y S F K + + LL A ++P R LS+QE+ +
Sbjct: 232 DFFFDVIQASFTQRRKTIYNNLSAKYFTKENKGELEGLLREAGIEPSRRGETLSMQEYAE 291
Query: 119 IC 120
+
Sbjct: 292 LS 293
>gi|238797489|ref|ZP_04640987.1| Dimethyladenosine transferase [Yersinia mollaretii ATCC 43969]
gi|238718630|gb|EEQ10448.1| Dimethyladenosine transferase [Yersinia mollaretii ATCC 43969]
Length = 232
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RL++M Q +CNV +P AF P P+VD VV P V +P+ D+
Sbjct: 108 LVAGPNSKAYGRLTVMAQYYCNVIPVLEVPPTAFTPAPKVDSAVVRLIPHVNMPNPVGDV 167
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K V LF + L+E + PILR +SV ++
Sbjct: 168 --RMLTRITTQAFNQRRKTVRNSLGDLFTAEQ------LIELG-IDPILRAENISVAQYC 218
Query: 118 QIC 120
++
Sbjct: 219 KLA 221
>gi|403051008|ref|ZP_10905492.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Acinetobacter bereziniae LMG 1003]
gi|445421605|ref|ZP_21436007.1| dimethyladenosine transferase [Acinetobacter sp. WC-743]
gi|444757573|gb|ELW82095.1| dimethyladenosine transferase [Acinetobacter sp. WC-743]
Length = 270
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 54/117 (46%), Gaps = 8/117 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPF 59
+ A ++ RLS+M Q +C F +P +F P P+V V P PII
Sbjct: 152 ITAEPNTKEYGRLSVMIQYYCKPTFLFEVPPGSFNPPPKVTSAVFRLEPYATKPIIAKNE 211
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
K + R+VS +F R+K + K LV ERA V P+ RP LS+ +F
Sbjct: 212 KALARLVSHVFTQRRKTLRN-------SLKGMLVEDGFERAGVDPMARPETLSLAQF 261
>gi|406667835|ref|ZP_11075587.1| Ribosomal RNA small subunit methyltransferase A [Bacillus
isronensis B3W22]
gi|405384350|gb|EKB43797.1| Ribosomal RNA small subunit methyltransferase A [Bacillus
isronensis B3W22]
Length = 295
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 59/127 (46%), Gaps = 11/127 (8%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G + LSI Q + + +P F+P+P VD V+ +P P K
Sbjct: 162 ITAKPGTKAYGSLSIAIQYYVTAEIAMVVPKTVFMPQPNVDSAVIRLIKHENP----PVK 217
Query: 61 LIER-----VVSCIFRYRQKQVYKP--ASLLFPKRKRQLVVSLLERACVKPILRPYQLSV 113
+I+ V F R+K + L+ K+ ++L++ LE A ++P R LS+
Sbjct: 218 VIDEDFLFEVSRASFAQRRKTILNNLQNGLINGKQNKELILKALEEAGIEPSRRGETLSI 277
Query: 114 QEFGQIC 120
QEFG++
Sbjct: 278 QEFGKLA 284
>gi|304311710|ref|YP_003811308.1| Dimethyladenosine transferase [gamma proteobacterium HdN1]
gi|301797443|emb|CBL45663.1| Dimethyladenosine transferase [gamma proteobacterium HdN1]
Length = 279
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 57/119 (47%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPR---VHPIIDL 57
M A E RL IM Q CNV+ F +P +AF P P+V +V TPR V P +D+
Sbjct: 149 MAAGANEEAYGRLGIMIQYHCNVEALFDVPPEAFNPPPKVTSAIVRLTPRSAHVTPALDV 208
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
KL+ +V+ F R+K V K +L LE + LRP L++ ++
Sbjct: 209 --KLLGTLVTEAFTQRRKTVRN-------ALKNRLSPEDLEACGIDLKLRPENLTLNDY 258
>gi|205372007|ref|ZP_03224825.1| dimethyladenosine transferase [Bacillus coahuilensis m4-4]
Length = 294
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 56/127 (44%), Gaps = 11/127 (8%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPII-----DL 57
A G ++ LSI Q + + +P F+P+P VD V+ T R PI D
Sbjct: 163 AKPGTKEYGSLSIAIQYYTEAETVMIVPKTVFMPQPNVDSAVIRLTKRKEPIARVEDEDF 222
Query: 58 PFKLIERVVSCIFRYRQKQVYKPAS--LLFPKRKRQLVVSLLERACVKPILRPYQLSVQE 115
F V F R+K + S L+ K K+ L+V LE V P R LS++E
Sbjct: 223 FFT----VTRASFAQRRKTILNNLSSQLVEGKNKKDLLVQCLESVGVDPTRRGETLSIEE 278
Query: 116 FGQICLA 122
F ++ A
Sbjct: 279 FAELSNA 285
>gi|339492698|ref|YP_004712991.1| dimethyladenosine transferase [Pseudomonas stutzeri ATCC 17588 =
LMG 11199]
gi|338800070|gb|AEJ03902.1| dimethyladenosine transferase [Pseudomonas stutzeri ATCC 17588 =
LMG 11199]
Length = 264
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 52/119 (43%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 144 LAAQPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPAPKVDSAIVRLVPHETLPHPARD- 202
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+ +ERVV F R+K + L L +E A V LRP QL + F
Sbjct: 203 -HRQLERVVREAFNQRRKTLRNTLKGL-------LDAEAIEAAGVDGSLRPEQLDLAAF 253
>gi|146281120|ref|YP_001171273.1| dimethyladenosine transferase [Pseudomonas stutzeri A1501]
gi|145569325|gb|ABP78431.1| dimethyladenosine transferase [Pseudomonas stutzeri A1501]
Length = 264
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 52/119 (43%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 144 LAAQPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPAPKVDSAIVRLVPHETLPHPARD- 202
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+ +ERVV F R+K + L L +E A V LRP QL + F
Sbjct: 203 -HRQLERVVREAFNQRRKTLRNTLKGL-------LDAEAIEAAGVDGSLRPEQLDLAAF 253
>gi|440229418|ref|YP_007343211.1| dimethyladenosine transferase [Serratia marcescens FGI94]
gi|440051123|gb|AGB81026.1| dimethyladenosine transferase [Serratia marcescens FGI94]
Length = 272
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 57/123 (46%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P HP+ D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPTAFAPPPKVDSAVVRLVPHREMPHPVDDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF + L V P LR +SV ++
Sbjct: 208 --RMLSRITTQAFNQRRKTIRNSLGDLFTPEQ-------LSELGVDPALRAENISVAQYC 258
Query: 118 QIC 120
++
Sbjct: 259 KLA 261
>gi|402486303|ref|ZP_10833135.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Rhizobium sp. CCGE 510]
gi|401814959|gb|EJT07289.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Rhizobium sp. CCGE 510]
Length = 275
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 55/116 (47%), Gaps = 8/116 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A E + RL ++C F +P +AF P P+V VVH TPR +P I
Sbjct: 161 IVACEDDDHYGRLGVLCGWRTEARMAFDVPPQAFTPPPKVTSTVVHLTPRENP-IPCAVS 219
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+ERV F R+K + + L + SLL +A + P R LSV+EF
Sbjct: 220 NLERVTHAAFGQRRKMLRQSLKPLGGE-------SLLVKAGIDPARRAETLSVEEF 268
>gi|387132148|ref|YP_006298120.1| dimethyladenosine transferase [Prevotella intermedia 17]
gi|386374996|gb|AFJ08780.1| dimethyladenosine transferase [Prevotella intermedia 17]
Length = 266
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 5/120 (4%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
M A G + LSI+ Q W +V++ FT+ F P P+V V+ T +D K
Sbjct: 140 MAAQPGNKTYGILSILIQAWYDVEYLFTVDEDVFNPPPKVKSAVIRMTRNNVSKLDCDEK 199
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
L +R+V +F R+K + +FP + R+ E+ + RP QL++ +F ++
Sbjct: 200 LFKRLVKTVFNQRRKMLRVSLRQMFPTKPRE---GFYEQEVMTK--RPEQLTIAQFAELT 254
>gi|387784913|ref|YP_006070996.1| dimethyladenosine transferase [Streptococcus salivarius JIM8777]
gi|338745795|emb|CCB96161.1| dimethyladenosine transferase (S-adenosylmethionine-6-N ,
N-adenosyl(rRNA) dimethyltransferase) (16S rRNA
dimethylase) (High level kasugamycin resistance protein
ksgA) (Kasugamycin dimethyltransferase) [Streptococcus
salivarius JIM8777]
Length = 290
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 3/116 (2%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ T R P++++ + + RV F
Sbjct: 172 LSIAVQYYMTAKVAFIVPRTVFVPAPNVDSAILKMTRREQPLVEVKDEDFLFRVAKASFV 231
Query: 72 YRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEFGQICLAYRD 125
+R+K ++ + F K + + + LE A +KP +R LS+ +F + A R+
Sbjct: 232 HRRKTLWNNLTNHFGKSEEVKAKLEQALEIAAIKPSIRGEALSISDFAHLSDALRE 287
>gi|260596475|ref|YP_003209046.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Cronobacter turicensis z3032]
gi|429101873|ref|ZP_19163847.1| Dimethyladenosine transferase [Cronobacter turicensis 564]
gi|260215652|emb|CBA27949.1| Dimethyladenosine transferase [Cronobacter turicensis z3032]
gi|426288522|emb|CCJ89960.1| Dimethyladenosine transferase [Cronobacter turicensis 564]
Length = 273
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P HP+ +L
Sbjct: 148 LVAGPNSKAYGRLSVMAQYFCNVIPVLEVPPTAFTPPPKVDSAVVRLVPHATPPHPVKEL 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+L+ R+ + F R+K + +F ++VSL V P +R +SV ++
Sbjct: 208 --RLLSRLTTEAFNQRRKTIRNSLGNVF---TPDVLVSL----GVDPAMRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QMA 261
>gi|123440993|ref|YP_001004982.1| dimethyladenosine transferase [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|166221715|sp|A1JJF4.1|RSMA_YERE8 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|122087954|emb|CAL10742.1| dimethyladenosine transferase [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 272
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RL++M Q +CNV +P AF P P+VD VV P V +P+ D+
Sbjct: 148 LVAGPNSKAYGRLTVMAQYYCNVIPVLEVPPTAFTPAPKVDSAVVRLIPHVNTPNPVGDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K V LF + L+E + PILR +SV ++
Sbjct: 208 --RMLSRITTQAFNQRRKTVRNSLGDLFTPEQ------LIELG-IDPILRAENISVAQYC 258
Query: 118 QIC 120
++
Sbjct: 259 KLA 261
>gi|422647520|ref|ZP_16710648.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. maculicola str. ES4326]
gi|330961062|gb|EGH61322.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. maculicola str. ES4326]
Length = 268
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 54/123 (43%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
M G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 145 MATGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPHETLPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ERVV F R+K + LL + + + V LRP QL + F
Sbjct: 204 -HRVLERVVREAFNQRRKTLRNTLKLLLSSDE-------ITASGVDGSLRPEQLDLAAFV 255
Query: 118 QIC 120
++
Sbjct: 256 RLA 258
>gi|417111499|ref|ZP_11964138.1| dimethyladenosine transferase (16S rRNA dimethylase) protein
[Rhizobium etli CNPAF512]
gi|327188008|gb|EGE55238.1| dimethyladenosine transferase (16S rRNA dimethylase) protein
[Rhizobium etli CNPAF512]
Length = 275
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 55/116 (47%), Gaps = 8/116 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A E + RL ++C F +P +AF P P+V VVH TPR +P I
Sbjct: 161 IVANEDDDHYGRLGVLCGWRTKARMAFDVPPQAFTPPPKVTSTVVHLTPRENP-IPCSVA 219
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+E+V F R+K + + L + SLL +A + P R LSV+EF
Sbjct: 220 NLEKVTQAAFGQRRKMLRQSLKPLGGE-------SLLVKAGIDPARRAETLSVEEF 268
>gi|331006688|ref|ZP_08329965.1| Dimethyladenosine transferase [gamma proteobacterium IMCC1989]
gi|330419496|gb|EGG93885.1| Dimethyladenosine transferase [gamma proteobacterium IMCC1989]
Length = 274
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 11/137 (8%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVH-PIIDLPF 59
++AT G + RLSIM Q +C +H F +P + F P+P+VD +V P P +
Sbjct: 147 LVATAGEKNYGRLSIMVQYYCETEHLFAVPPECFDPQPKVDSAIVRLQPHKKLPYVANNV 206
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
+ +V+ F+ R+K + L Q+ E+ + LRP LS ++
Sbjct: 207 AHLSHLVNLAFQQRRKTLRNTLKQLADGDALQIAA---EKLDLNLSLRPENLSTED---- 259
Query: 120 CLAYRDMCEEMPGLYEY 136
Y ++ + GL +
Sbjct: 260 ---YVNLSNTLDGLSNH 273
>gi|238782671|ref|ZP_04626701.1| Dimethyladenosine transferase [Yersinia bercovieri ATCC 43970]
gi|238716331|gb|EEQ08313.1| Dimethyladenosine transferase [Yersinia bercovieri ATCC 43970]
Length = 214
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RL++M Q +CNV +P AF P P+VD VV P V +P+ D+
Sbjct: 90 LVAGPNSKAYGRLTVMAQYYCNVIPVLEVPPTAFTPAPKVDSAVVRLIPHVNMPNPVGDV 149
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K V LF + L+E + PILR +SV ++
Sbjct: 150 --RMLTRITTQAFNQRRKTVRNSLGDLFTAEQ------LIELG-IDPILRAENISVAQYC 200
Query: 118 QIC 120
++
Sbjct: 201 KLA 203
>gi|86516031|gb|ABC97666.1| KsgA [Shigella boydii]
Length = 256
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P +P+ D+
Sbjct: 135 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHTTMPYPVKDI 194
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF +L + P +R +SV ++
Sbjct: 195 --RVLSRITTEAFNQRRKTIRNSLGNLFSAE-------VLTEMGIDPAMRAENISVAQYC 245
Query: 118 QIC 120
Q+
Sbjct: 246 QMA 248
>gi|410628747|ref|ZP_11339465.1| ribosomal RNA small subunit methyltransferase A [Glaciecola
mesophila KMM 241]
gi|410151751|dbj|GAC26234.1| ribosomal RNA small subunit methyltransferase A [Glaciecola
mesophila KMM 241]
Length = 268
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 9/125 (7%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPF 59
+ A+ G + RLS+M Q C++ +P +AF P P+VD +V P +V P++
Sbjct: 146 LAASPGNKNYGRLSVMAQYHCHITPVIHVPPEAFNPPPKVDSAIVRLIPHKVRPVVVKSE 205
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
+ + RV + F R+K + K L + L + P LR LS+ +FGQI
Sbjct: 206 ESLNRVCAQAFNQRRKTIRN-------SLKESLSEAQLISLDINPELRAENLSLAQFGQI 258
Query: 120 C-LAY 123
LA+
Sbjct: 259 ADLAF 263
>gi|420257169|ref|ZP_14759935.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Yersinia enterocolitica subsp. enterocolitica WA-314]
gi|404515314|gb|EKA29083.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Yersinia enterocolitica subsp. enterocolitica WA-314]
Length = 272
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RL++M Q +CNV +P AF P P+VD VV P V +P+ D+
Sbjct: 148 LVAGPNSKAYGRLTVMAQYYCNVIPVLEVPPTAFTPAPKVDSAVVRLIPHVNTPNPVGDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K V LF + L+E + PILR +SV ++
Sbjct: 208 --RMLSRITTQAFNQRRKTVRNSLGDLFTPEQ------LIELG-IDPILRAENISVAQYC 258
Query: 118 QIC 120
++
Sbjct: 259 KLA 261
>gi|153873941|ref|ZP_02002345.1| Ribosomal RNA adenine methylase transferase [Beggiatoa sp. PS]
gi|152069594|gb|EDN67654.1| Ribosomal RNA adenine methylase transferase [Beggiatoa sp. PS]
Length = 266
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 66/137 (48%), Gaps = 22/137 (16%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
MIAT + RLS+M Q +C ++ F + +AF P P+V+ +V P V P P +
Sbjct: 140 MIATPSTKNYGRLSVMLQYYCQINKLFDVDPEAFRPPPKVNSTIVQLIPHVSP----PVE 195
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSL--------LERACVKPILRPYQLS 112
+I KQ+ K +L F ++++ L +L ++ A + P R L+
Sbjct: 196 VIN----------DKQLSKMVALAFSQKRKTLRNTLKNVLDADAIQAAGIDPQARAETLT 245
Query: 113 VQEFGQICLAYRDMCEE 129
+ EF ++ ++ ++ E
Sbjct: 246 LAEFARLANSFVNVGSE 262
>gi|381152828|ref|ZP_09864697.1| dimethyladenosine transferase [Methylomicrobium album BG8]
gi|380884800|gb|EIC30677.1| dimethyladenosine transferase [Methylomicrobium album BG8]
Length = 267
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 8/119 (6%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDL-PFKL 61
A G +Q RLS+M + +C +H F +P ++F P P+V +V TP P + +
Sbjct: 143 AEPGNKQYGRLSVMMRYYCETEHLFDVPPESFDPVPKVMSSIVRLTPHRRPPVRIGSTDK 202
Query: 62 IERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
+ R+V+ F R+K + K L S L+ + P LR L++Q+F ++
Sbjct: 203 LNRIVTQAFSQRRKTLRNSL-------KNLLSDSDLDALSIDPKLRAENLTLQDFAKLS 254
>gi|332160258|ref|YP_004296835.1| dimethyladenosine transferase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325664488|gb|ADZ41132.1| dimethyladenosine transferase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330863032|emb|CBX73164.1| dimethyladenosine transferase [Yersinia enterocolitica W22703]
Length = 272
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RL++M Q +CNV +P AF P P+VD VV P V +P+ D+
Sbjct: 148 LVAGPNSKAYGRLTVMAQYYCNVIPVLEVPPTAFTPAPKVDSAVVRLIPHVNTPNPVGDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K V LF + L+E + PILR +SV ++
Sbjct: 208 --RMLSRITTQAFNQRRKTVRNSLGDLFTPEQ------LIELG-IDPILRAENISVAQYC 258
Query: 118 QIC 120
++
Sbjct: 259 KLA 261
>gi|425738696|ref|ZP_18856953.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Staphylococcus massiliensis S46]
gi|425478967|gb|EKU46149.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Staphylococcus massiliensis S46]
Length = 295
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 14/131 (10%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLP---- 58
A G + LSI+ Q + T+P F+P P VD V+ T R P++++
Sbjct: 164 AKVGTKSYGSLSIVAQYYTETSRVLTVPKSVFLPPPNVDSIVIKLTRRDQPVVEVDDEET 223
Query: 59 -FKLIERVVSCIFRYRQKQVYKP-ASLLFPKRK-RQLVVSLLERACVKPILRPYQLSVQE 115
FKL + F R+K +Y +L+F +K ++ + LE + + P R LS++E
Sbjct: 224 FFKLTK----GAFSQRRKTIYNNYQNLVFDGKKYKETIKEWLESSDIDPKRRGETLSIKE 279
Query: 116 FGQICLAYRDM 126
F Q+ Y +M
Sbjct: 280 FAQL---YENM 287
>gi|373465297|ref|ZP_09556770.1| dimethyladenosine transferase [Lactobacillus kisonensis F0435]
gi|371760921|gb|EHO49581.1| dimethyladenosine transferase [Lactobacillus kisonensis F0435]
Length = 296
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 63/129 (48%), Gaps = 5/129 (3%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF- 59
+ A G + LS++ Q NV+ F +P AFIP+P+VD ++ TP++ + +PF
Sbjct: 164 LTAVPGTKAYGSLSVIVQERNNVEISFIVPRTAFIPQPKVDSAIIKLTPKLAKEV-VPFD 222
Query: 60 -KLIERVVSCIFRYRQKQVYKPASLLFPKR--KRQLVVSLLERACVKPILRPYQLSVQEF 116
K V F +++K ++ F K ++ + +L + P R QL++ +F
Sbjct: 223 EKRFAGFVRGCFMHQRKTLWNNLLGFFGKTDAAKETITKVLADVQIDPGDRSEQLTIDQF 282
Query: 117 GQICLAYRD 125
+ A+ D
Sbjct: 283 VNLANAFHD 291
>gi|422621569|ref|ZP_16690130.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein,
partial [Pseudomonas syringae pv. pisi str. 1704B]
gi|330944934|gb|EGH46747.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. pisi str. 1704B]
Length = 189
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 55/123 (44%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
M A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 66 MAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPYETLPHPAKD- 124
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ER+V F R+K + LL L + + V LRP QL + F
Sbjct: 125 -HRVLERIVREAFNQRRKTLRNTLKLL-------LTSDEITASGVDGSLRPEQLDLAAFV 176
Query: 118 QIC 120
++
Sbjct: 177 RLA 179
>gi|425745629|ref|ZP_18863672.1| dimethyladenosine transferase [Acinetobacter baumannii WC-323]
gi|425488067|gb|EKU54407.1| dimethyladenosine transferase [Acinetobacter baumannii WC-323]
Length = 270
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 54/117 (46%), Gaps = 8/117 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPF 59
+ AT ++ RLS+M Q +C F +P +F P P+V V P PI+
Sbjct: 152 ITATPNTKEYGRLSVMIQYYCKPTFLFEVPPGSFNPPPKVTSAVFRLEPYETKPIVAKNE 211
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
K + R+V +F R+K + K LV E+A V P+ RP LS+ +F
Sbjct: 212 KALARLVGHVFTQRRKTLRN-------SLKGMLVEDGFEKAGVDPMARPETLSLADF 261
>gi|386311303|ref|YP_006007359.1| dimethyladenosine transferase [Yersinia enterocolitica subsp.
palearctica Y11]
gi|418240101|ref|ZP_12866644.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Yersinia enterocolitica subsp. palearctica PhRBD_Ye1]
gi|433551406|ref|ZP_20507448.1| SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase [Yersinia enterocolitica IP 10393]
gi|318607172|emb|CBY28670.1| dimethyladenosine transferase [Yersinia enterocolitica subsp.
palearctica Y11]
gi|351780604|gb|EHB22674.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Yersinia enterocolitica subsp. palearctica PhRBD_Ye1]
gi|431787588|emb|CCO70488.1| SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase [Yersinia enterocolitica IP 10393]
Length = 272
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RL++M Q +CNV +P AF P P+VD VV P V +P+ D+
Sbjct: 148 LVAGPNSKAYGRLTVMAQYYCNVIPVLEVPPTAFTPAPKVDSAVVRLIPHVNTPNPVGDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K V LF + L+E + PILR +SV ++
Sbjct: 208 --RMLSRITTQAFNQRRKTVRNSLGDLFTPEQ------LIELG-IDPILRAENISVAQYC 258
Query: 118 QIC 120
++
Sbjct: 259 KLA 261
>gi|311280966|ref|YP_003943197.1| dimethyladenosine transferase [Enterobacter cloacae SCF1]
gi|308750161|gb|ADO49913.1| dimethyladenosine transferase [Enterobacter cloacae SCF1]
Length = 273
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 57/123 (46%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +C V +P AF P P+VD VV P HP+ D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCQVIPVLEVPPSAFTPPPKVDSAVVRLVPHSTPPHPVKDI 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V +L + P +R +SV ++
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLGNLF-------TVDVLTGLGIDPAVRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QMA 261
>gi|170768489|ref|ZP_02902942.1| dimethyladenosine transferase [Escherichia albertii TW07627]
gi|170122593|gb|EDS91524.1| dimethyladenosine transferase [Escherichia albertii TW07627]
Length = 273
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P +P+ D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHTTMPYPVKDI 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF +L + P +R +SV ++
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------AEVLTEMGIDPAMRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QMA 261
>gi|238786684|ref|ZP_04630485.1| Dimethyladenosine transferase [Yersinia frederiksenii ATCC 33641]
gi|238725052|gb|EEQ16691.1| Dimethyladenosine transferase [Yersinia frederiksenii ATCC 33641]
Length = 222
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RL++M Q +CNV +P AF P P+VD VV P V +P+ D+
Sbjct: 98 LVAGPNSKAYGRLTVMAQYYCNVIPVLEVPPTAFTPAPKVDSAVVRLIPHVQMPNPVGDV 157
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K V LF + L+E + PILR +SV ++
Sbjct: 158 --RMLSRITTQAFNQRRKTVRNSLGDLFTPEQ------LIELG-IDPILRAENISVAQYC 208
Query: 118 QIC 120
++
Sbjct: 209 KLA 211
>gi|345297831|ref|YP_004827189.1| ribosomal RNA small subunit methyltransferase A [Enterobacter
asburiae LF7a]
gi|345091768|gb|AEN63404.1| Ribosomal RNA small subunit methyltransferase A [Enterobacter
asburiae LF7a]
Length = 273
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 8/121 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPF 59
M+A + RLS+M Q +CNV +P AF P P+VD VV P +V P
Sbjct: 148 MVAGPNSKAYGRLSVMAQYFCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHKVKPYPVKEL 207
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
+++ R+ + F R+K + S F V +L + P +R +SV+++ ++
Sbjct: 208 RVLSRITTEAFNQRRKTIRNSLSNSFS-------VEVLAELGIDPAMRAENISVEQYCKL 260
Query: 120 C 120
Sbjct: 261 A 261
>gi|422642714|ref|ZP_16706130.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae Cit 7]
gi|330955094|gb|EGH55354.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae Cit 7]
Length = 268
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 54/123 (43%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
M A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 145 MAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPYETLPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
++ER+V F R+K + LL L + + V LRP QL + F
Sbjct: 204 -HHVLERIVREAFNQRRKTLRNTLKLL-------LTSDEITASGVDGSLRPEQLDLAAFV 255
Query: 118 QIC 120
++
Sbjct: 256 RLA 258
>gi|300724851|ref|YP_003714176.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Xenorhabdus nematophila ATCC 19061]
gi|297631393|emb|CBJ92090.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase,
kasugamycin resistance [Xenorhabdus nematophila ATCC
19061]
Length = 269
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A G + RLS+M Q +C V +P AF P P+VD VV P HP+ D+
Sbjct: 148 LVAGPGSKAYGRLSVMAQYYCQVIPVLEVPPTAFTPAPKVDSAVVRLIPHKTIPHPVHDI 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+++ R+ + F R+K + S +F V L V P R +SV+++
Sbjct: 208 --RILARITTQAFNQRRKTIRNSLSHIFS-------VEQLSELGVDPGTRAENISVEQY 257
>gi|254429167|ref|ZP_05042874.1| dimethyladenosine transferase [Alcanivorax sp. DG881]
gi|196195336|gb|EDX90295.1| dimethyladenosine transferase [Alcanivorax sp. DG881]
Length = 270
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 58/135 (42%), Gaps = 12/135 (8%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A+ G RLSIM Q C D+ F +P +AF P P+VD VV P HP D
Sbjct: 141 LTASPGTRDWGRLSIMVQYHCQADYLFFVPPEAFSPPPRVDSAVVRLIPHASPPHPADDE 200
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+ ++V+ F R+K + K + E + LRP QLSV ++
Sbjct: 201 DH--LRKLVAQAFTQRRKAIRN-------GLKSWVSAEQFEALGIDAGLRPDQLSVADYV 251
Query: 118 QICLAYRDMCEEMPG 132
+ R +E G
Sbjct: 252 ALANISRPNADEDKG 266
>gi|238755736|ref|ZP_04617069.1| Dimethyladenosine transferase [Yersinia ruckeri ATCC 29473]
gi|238706028|gb|EEP98412.1| Dimethyladenosine transferase [Yersinia ruckeri ATCC 29473]
Length = 236
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RL++M Q +CNV +P AF P P+VD VV P + +P+ D+
Sbjct: 113 LVAGPNSKAYGRLTVMAQYYCNVIPVLEVPPTAFTPAPKVDSAVVRLIPHINMPNPVGDV 172
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K V LF + L V P LR +SV ++
Sbjct: 173 --RMLSRITTQAFNQRRKTVRNSLGDLFTPEQ-------LTELGVNPTLRAENISVAQYC 223
Query: 118 QIC 120
++
Sbjct: 224 KLA 226
>gi|407974537|ref|ZP_11155446.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Nitratireductor indicus C115]
gi|407430226|gb|EKF42901.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Nitratireductor indicus C115]
Length = 275
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 53/120 (44%), Gaps = 8/120 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A G RL ++ F +P +AF P P+V VVH PR PI + K
Sbjct: 161 IVAMPGDRSYGRLGVLAGWRTESRIAFDVPPQAFTPPPKVTSSVVHLVPRQTPIA-VDAK 219
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
+ RV F R+K + + L + +LLER + P R LSV+EF +
Sbjct: 220 ALARVTEAAFGQRRKMLRQSLKALGGE-------ALLERTGIDPTRRAETLSVEEFAALA 272
>gi|389707859|ref|ZP_10186499.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Acinetobacter sp. HA]
gi|388610478|gb|EIM39598.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Acinetobacter sp. HA]
Length = 270
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 8/117 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPF 59
+ A+ ++ RLS+M Q +C F +P +F P P+V V P V PI+
Sbjct: 152 ITASPNTKEYGRLSVMIQYYCKPTFLFEVPPGSFNPPPKVTSAVFRLEPYDVKPIVAKNE 211
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
K + R+VS +F R+K + K LV E+A V P+ RP L++ +F
Sbjct: 212 KALARLVSHVFTQRRKTLRN-------SLKGMLVEDGFEKAGVDPMARPETLTLAQF 261
>gi|385785842|ref|YP_005816951.1| dimethyladenosine transferase [Erwinia sp. Ejp617]
gi|310765114|gb|ADP10064.1| dimethyladenosine transferase [Erwinia sp. Ejp617]
Length = 275
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A G + RL++M Q +C V +P ++F P P+VD VV P HP+ D+
Sbjct: 148 LVAGPGSKAYGRLTVMAQYYCQVIPVLEVPPESFTPAPKVDSAVVRLMPYARLPHPVDDI 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V L + P LR +SV ++
Sbjct: 208 --RVLSRITTEAFGKRRKTLRNSLGHLFS-------VDALTEMNIDPTLRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QLA 261
>gi|119474855|ref|ZP_01615208.1| dimethyladenosine transferase [marine gamma proteobacterium
HTCC2143]
gi|119451058|gb|EAW32291.1| dimethyladenosine transferase [marine gamma proteobacterium
HTCC2143]
Length = 267
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A+ G + RLSIM Q +C++ F +P +AF P+P+V +V TP HP ++
Sbjct: 147 LAASPGSKSYGRLSIMAQYYCDIHSLFEVPPEAFSPRPKVQSAIVRLTPYKQPPHPAKNI 206
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
K ++ ++ F R+K + K L +E + P RP LS+++F
Sbjct: 207 --KTLQALLRTCFNQRRKTLRNSL-------KNDLSSDQMEALDINPSARPETLSLEQF 256
>gi|13476521|ref|NP_108091.1| dimethyladenosine transferase [Mesorhizobium loti MAFF303099]
gi|27151594|sp|Q984S7.1|RSMA_RHILO RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|14027282|dbj|BAB54236.1| dimethyladenosine transferase [Mesorhizobium loti MAFF303099]
Length = 279
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 53/116 (45%), Gaps = 8/116 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A G + RL ++ F +P +AF P P+V VVH PR P + K
Sbjct: 165 IVAEPGSDAYGRLGVLAGWRTKARIAFDVPPQAFTPPPKVTSSVVHLEPRATP-LPADVK 223
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+ RV F R+K + + L + +LLERA + P R LSV+EF
Sbjct: 224 KLGRVTEAAFGQRRKMLRQSVKSLGGE-------ALLERAGIDPTRRAETLSVEEF 272
>gi|255319639|ref|ZP_05360849.1| dimethyladenosine transferase [Acinetobacter radioresistens SK82]
gi|262379013|ref|ZP_06072170.1| dimethyladenosine transferase [Acinetobacter radioresistens SH164]
gi|421466159|ref|ZP_15914845.1| dimethyladenosine transferase [Acinetobacter radioresistens
WC-A-157]
gi|421855752|ref|ZP_16288127.1| ribosomal RNA small subunit methyltransferase A [Acinetobacter
radioresistens DSM 6976 = NBRC 102413]
gi|255303323|gb|EET82530.1| dimethyladenosine transferase [Acinetobacter radioresistens SK82]
gi|262300298|gb|EEY88210.1| dimethyladenosine transferase [Acinetobacter radioresistens SH164]
gi|400203670|gb|EJO34656.1| dimethyladenosine transferase [Acinetobacter radioresistens
WC-A-157]
gi|403188761|dbj|GAB74328.1| ribosomal RNA small subunit methyltransferase A [Acinetobacter
radioresistens DSM 6976 = NBRC 102413]
Length = 270
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 8/117 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPF 59
+ A ++ RLS+M Q +C + F +P +F P P+V V P + PI+
Sbjct: 152 ITAEPNTKEYGRLSVMIQYYCKPTYLFEVPPGSFNPPPKVTSAVFRLEPYKDKPIVAQNE 211
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
K + R+VS +F R+K + K L + E+A V P+ RP L++ EF
Sbjct: 212 KALARLVSHVFTQRRKTLRN-------SLKGMLAENGFEKAGVNPMARPETLTLAEF 261
>gi|159043734|ref|YP_001532528.1| dimethyladenosine transferase [Dinoroseobacter shibae DFL 12]
gi|189028806|sp|A8LI73.1|RSMA_DINSH RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|157911494|gb|ABV92927.1| dimethyladenosine transferase [Dinoroseobacter shibae DFL 12]
Length = 280
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 52/116 (44%), Gaps = 5/116 (4%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A G + RL+I+ Q + T+P +AFIP P+V VVH R P
Sbjct: 160 IVAKPGSKAYGRLAILAQWRAEAEIALTLPPQAFIPAPKVHSAVVHLRARTEPRYPADAA 219
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
++ RVV+ F R+K + L P + L + P R LS++EF
Sbjct: 220 VLSRVVATAFNQRRKMLRASLKGLTPGIEDHLAA-----VGIDPTRRAETLSLEEF 270
>gi|421619266|ref|ZP_16060227.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas stutzeri KOS6]
gi|409778735|gb|EKN58421.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas stutzeri KOS6]
Length = 264
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 52/119 (43%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ AT G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 144 LAATPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPAPKVDSAIVRLVPHETLPHPARD- 202
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+ +ERVV F R+K + L L + A V LRP QL + F
Sbjct: 203 -HRQLERVVREAFNQRRKTLRNTLKGL-------LDAEAIAAADVDGSLRPEQLDLAAF 253
>gi|326794309|ref|YP_004312129.1| ribosomal RNA small subunit methyltransferase A [Marinomonas
mediterranea MMB-1]
gi|326545073|gb|ADZ90293.1| Ribosomal RNA small subunit methyltransferase A [Marinomonas
mediterranea MMB-1]
Length = 266
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 56/121 (46%), Gaps = 8/121 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVH-PIIDLPF 59
+ A G RLS+M Q +C+V+ F + +F P P+VD +V TP P++
Sbjct: 144 LAARPGDSLYGRLSVMAQYFCSVESLFIVGPDSFDPPPKVDSAIVRMTPYTTLPVVAHDL 203
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
K +E V F+ R+K + K L LE + P LRP +L V +F +I
Sbjct: 204 KGLEDTVRIGFQQRRKTLRN-------NYKGTLTAEELESIQIDPTLRPERLDVPDFVRI 256
Query: 120 C 120
Sbjct: 257 A 257
>gi|429088610|ref|ZP_19151342.1| Dimethyladenosine transferase [Cronobacter universalis NCTC 9529]
gi|426508413|emb|CCK16454.1| Dimethyladenosine transferase [Cronobacter universalis NCTC 9529]
Length = 273
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 57/123 (46%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CNV +P AF P P+VD VV P HP+ +L
Sbjct: 148 LVAGPNSKAYGRLSVMAQYFCNVIPVLEVPPTAFTPPPKVDSAVVRLVPHATPPHPVKEL 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+L+ R+ + F R+K + +F +L + P +R +SV ++
Sbjct: 208 --RLLSRLTTEAFNQRRKTIRNSLGNVFSPE-------ILTSLGIDPAMRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QMA 261
>gi|418294118|ref|ZP_12906019.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
gi|379065502|gb|EHY78245.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
Length = 264
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 52/119 (43%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ AT G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 144 LAATPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPAPKVDSAIVRLVPHETLPHPARD- 202
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+ +ERVV F R+K + L L + A V LRP QL + F
Sbjct: 203 -HRQLERVVREAFNQRRKTLRNTLKGL-------LDAEAIAAADVDGSLRPEQLDLAAF 253
>gi|430751838|ref|YP_007214746.1| dimethyladenosine transferase [Thermobacillus composti KWC4]
gi|430735803|gb|AGA59748.1| dimethyladenosine transferase [Thermobacillus composti KWC4]
Length = 300
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 56/121 (46%), Gaps = 1/121 (0%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
M A G ++ LS+ + + + T+P F+P P VD VV T R P +D+ +
Sbjct: 172 MTAPPGGKEYGSLSVAVRYFAEPEVVCTVPRTVFVPPPNVDSAVVRLTLRARPPVDVTDE 231
Query: 61 -LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
+ RVV F R+K + + L K +RQ +L + P R LS++EF +
Sbjct: 232 AMFFRVVHAAFAQRRKTLANNLTALLGKERRQEAAALPASCGIDPGRRGETLSLEEFAAL 291
Query: 120 C 120
Sbjct: 292 A 292
>gi|422618520|ref|ZP_16687217.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. japonica str. M301072]
gi|330898897|gb|EGH30316.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. japonica str. M301072]
Length = 268
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 53/119 (44%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
M A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 145 MAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPYETLPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+++ER+V F R+K + LL L + + V LRP QL + F
Sbjct: 204 -HRVLERIVREAFNQRRKTLRNTLKLL-------LTSDEITASGVDGSLRPEQLDLAVF 254
>gi|323490982|ref|ZP_08096176.1| dimethyladenosine transferase [Planococcus donghaensis MPA1U2]
gi|323395338|gb|EGA88190.1| dimethyladenosine transferase [Planococcus donghaensis MPA1U2]
Length = 292
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 7/125 (5%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHP---IIDL 57
+ A G + LSI Q + + T+P F+P+P VD V+ T R P +I+
Sbjct: 162 ITAKPGTKAYGSLSIAIQYYTQAEMALTVPKSVFLPQPNVDSAVIRMTKREVPEVEVINE 221
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFP--KRKRQLVVSLLERACVKPILRPYQLSVQE 115
F V F R+K + + P K K++ ++ LE A + P R L+++E
Sbjct: 222 DFFF--SVTRGSFVQRRKTILNNLQVAMPSGKEKKEFILKALEEAEIDPTRRGETLTIKE 279
Query: 116 FGQIC 120
FG +
Sbjct: 280 FGLLS 284
>gi|424880908|ref|ZP_18304540.1| dimethyladenosine transferase [Rhizobium leguminosarum bv. trifolii
WU95]
gi|392517271|gb|EIW42003.1| dimethyladenosine transferase [Rhizobium leguminosarum bv. trifolii
WU95]
Length = 275
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 55/116 (47%), Gaps = 8/116 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A E + RL ++C F +P +AF P P+V VVH TPR +P I
Sbjct: 161 IVANEDDDHYGRLGVLCGWRTEARMAFDVPPQAFTPPPKVTSTVVHLTPRENP-IPCTVA 219
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+E+V F R+K + + L + SLL +A + P R LSV+EF
Sbjct: 220 NLEKVTQAAFGQRRKMLRQSLKPLGGE-------SLLVKAGIDPARRAETLSVEEF 268
>gi|317493320|ref|ZP_07951742.1| dimethyladenosine transferase [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316918713|gb|EFV40050.1| dimethyladenosine transferase [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 270
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 15/134 (11%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RL++M Q +C V +P AF P P+VD VV P HP+ D+
Sbjct: 148 LVAGPNSKAYGRLTVMAQYYCQVIPVLEVPPTAFRPAPKVDSAVVRLIPHATIPHPVKDI 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K V LF + L + P LR +SV+ +
Sbjct: 208 --RVLSRITTEAFNQRRKTVRNSLGHLFTPEQ-------LTELGIDPALRAENISVENY- 257
Query: 118 QICLAYRDMCEEMP 131
C +CE+ P
Sbjct: 258 --CKLANWLCEKSP 269
>gi|238764652|ref|ZP_04625597.1| Dimethyladenosine transferase [Yersinia kristensenii ATCC 33638]
gi|238697144|gb|EEP89916.1| Dimethyladenosine transferase [Yersinia kristensenii ATCC 33638]
Length = 214
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 61/123 (49%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RL++M Q +CNV +P AF P P+VD VV P V +P+ D+
Sbjct: 90 LVAGPNSKAYGRLTVMAQYYCNVIPVLEVPPTAFTPAPKVDSAVVRLIPHVNMPNPVGDV 149
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K V LF + L+E + PI+R +SV ++
Sbjct: 150 --RMLTRITTQAFNQRRKTVRNSLGDLFTSEQ------LIELG-IDPIMRAENISVAQYC 200
Query: 118 QIC 120
++
Sbjct: 201 KLA 203
>gi|359430019|ref|ZP_09221035.1| ribosomal RNA small subunit methyltransferase A [Acinetobacter sp.
NBRC 100985]
gi|358234573|dbj|GAB02574.1| ribosomal RNA small subunit methyltransferase A [Acinetobacter sp.
NBRC 100985]
Length = 270
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 54/117 (46%), Gaps = 8/117 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPF 59
+ AT ++ RLS+M Q +C F +P +F P P+V V P + PI+
Sbjct: 152 ITATPNTKEYGRLSVMIQYYCKPTFLFEVPPGSFNPPPKVTSAVFRLEPYEIKPIVAKDE 211
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
K + R+V +F R+K + K L E+A V P+ RP LS+ +F
Sbjct: 212 KALARLVGHVFTQRRKTLRN-------SLKGMLAEDGFEKAGVDPMARPETLSLADF 261
>gi|393198767|ref|YP_006460609.1| dimethyladenosine transferase [Solibacillus silvestris StLB046]
gi|327438098|dbj|BAK14463.1| dimethyladenosine transferase [Solibacillus silvestris StLB046]
Length = 295
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 59/127 (46%), Gaps = 11/127 (8%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G + LSI Q + + +P F+P+P VD V+ +P P K
Sbjct: 162 ITAKPGTKAYGSLSIAIQFYVTAEIAMVVPKTVFMPQPNVDSAVIRLIKHENP----PVK 217
Query: 61 LIER-----VVSCIFRYRQKQVYKP--ASLLFPKRKRQLVVSLLERACVKPILRPYQLSV 113
+I+ V F R+K + L+ K+ ++L++ LE A ++P R LS+
Sbjct: 218 VIDEDFLFEVSRASFAQRRKTILNNLQNGLVNGKQNKELILKALEEAGIEPSRRGETLSI 277
Query: 114 QEFGQIC 120
QEFG++
Sbjct: 278 QEFGKLA 284
>gi|261338954|ref|ZP_05966812.1| hypothetical protein ENTCAN_05155 [Enterobacter cancerogenus ATCC
35316]
gi|288318781|gb|EFC57719.1| dimethyladenosine transferase [Enterobacter cancerogenus ATCC
35316]
Length = 273
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 57/123 (46%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A + RLS+M Q +CNV +P AF P P+VD VV P H + P K
Sbjct: 148 LVAGPNSKAYGRLSVMAQYFCNVIPVLEVPPTAFTPPPKVDSAVVRLVP--HKTMPYPVK 205
Query: 61 ---LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
++ R+ + F R+K + LF V +L + P +R +SV+++
Sbjct: 206 ELRVLSRITTEAFNQRRKTIRNSLGNLF-------TVDVLAELGIDPTMRAENISVEQYC 258
Query: 118 QIC 120
++
Sbjct: 259 KLA 261
>gi|192361991|ref|YP_001981369.1| dimethyladenosine transferase [Cellvibrio japonicus Ueda107]
gi|190688156|gb|ACE85834.1| dimethyladenosine transferase [Cellvibrio japonicus Ueda107]
Length = 287
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 59/128 (46%), Gaps = 8/128 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVH-PIIDLPF 59
M A G RL IM Q +C V++ F +P +F P P+VD +V P P +
Sbjct: 155 MAAEPGSGAYGRLGIMVQYFCAVENLFEVPPTSFDPPPKVDSAIVRLVPHQQLPYLANNL 214
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
K +E +V+ F+ R+K + K L ++ L+ V LRP +S+ E+ QI
Sbjct: 215 KTLETLVNVAFQQRRKTLRN-------SLKSLLSMAQLDSLPVDLNLRPENISLAEYVQI 267
Query: 120 CLAYRDMC 127
D+
Sbjct: 268 SNLLGDVT 275
>gi|188532871|ref|YP_001906668.1| dimethyladenosine transferase [Erwinia tasmaniensis Et1/99]
gi|226732581|sp|B2VGP6.1|RSMA_ERWT9 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|188027913|emb|CAO95770.1| Dimethyladenosine transferase [Erwinia tasmaniensis Et1/99]
Length = 273
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A G + RL++M Q +C V +P ++F P P+VD VV P HP+ D+
Sbjct: 148 LVAGPGSKAYGRLTVMAQYYCQVIPVLEVPPESFTPAPKVDSAVVRLMPYAQPPHPVNDI 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+ + R+ + F R+K + LF V +L + P LR ++V ++
Sbjct: 208 --RALSRITTEAFGKRRKTLRNSLGHLF-------TVDVLAEMNIDPTLRAENITVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QLA 261
>gi|328873034|gb|EGG21401.1| Dimethyladenosine transferase [Dictyostelium fasciculatum]
Length = 470
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 8/113 (7%)
Query: 12 RLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIF 70
RL++M C+ + +PGK F+P P+VD V+H P V PI + K +E + +F
Sbjct: 187 RLAVMVGQECHSKIIYDLPGKVFVPPPKVDASVIHIEPLVEPIGQVDSKEHLEFICRSLF 246
Query: 71 RYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQICLAY 123
+R+K + ++ L P K LL + P RP L+ +EF I Y
Sbjct: 247 NHRRKTI---SNALKPMGKGS--EGLL--GDIDPSRRPQSLTFKEFADITNRY 292
>gi|308185629|ref|YP_003929760.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Pantoea vagans C9-1]
gi|308056139|gb|ADO08311.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Pantoea vagans C9-1]
Length = 273
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A G + RL++M Q +C V +P +F P P+VD VV P HP+ D+
Sbjct: 148 LVAGPGSKAYGRLTVMAQYYCQVIPVLEVPPHSFTPPPKVDSAVVRLVPFAEPPHPVSDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + S + + LE + P LR +SV ++
Sbjct: 208 --RILSRITTEAFGQRRKTLRNSLSHM-------VAAGALEELSIDPTLRAENVSVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QLA 261
>gi|386019301|ref|YP_005937325.1| dimethyladenosine transferase [Pseudomonas stutzeri DSM 4166]
gi|327479273|gb|AEA82583.1| dimethyladenosine transferase [Pseudomonas stutzeri DSM 4166]
Length = 264
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 51/119 (42%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 144 LAAQPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPAPKVDSAIVRLVPHETLPHPARD- 202
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+ +ERVV F R+K + L +E A V LRP QL + F
Sbjct: 203 -HRQLERVVREAFNQRRKTLRNTLKGLLDGEA-------IEAAGVDGSLRPEQLDLAAF 253
>gi|325286669|ref|YP_004262459.1| ribosomal RNA small subunit methyltransferase A [Cellulophaga
lytica DSM 7489]
gi|324322123|gb|ADY29588.1| Ribosomal RNA small subunit methyltransferase A [Cellulophaga
lytica DSM 7489]
Length = 286
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 12/116 (10%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFKLI 62
+ EG + LS++ Q + + ++ FT+P F P P+VD GV+ T + + I + KL+
Sbjct: 169 SKEGSKAYGILSVLTQAYYHAEYLFTVPPTVFNPPPKVDSGVLRLTRKENLDIGVDEKLL 228
Query: 63 ERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPIL--RPYQLSVQEF 116
RVV +F R+K + R L + PI RP QL+V++F
Sbjct: 229 YRVVKAVFNQRRKTI----------RNSLKTFELSDNLKEDPIFGKRPEQLAVEDF 274
>gi|148977505|ref|ZP_01814094.1| dimethyladenosine transferase [Vibrionales bacterium SWAT-3]
gi|145963300|gb|EDK28566.1| dimethyladenosine transferase [Vibrionales bacterium SWAT-3]
Length = 271
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 8/117 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPF 59
+ A G + RL++M Q +C V +P AF+P P+VD VV P V P
Sbjct: 147 LAAGPGSKAYGRLTVMAQYYCKVTPVLEVPPTAFVPPPKVDSAVVRLQPYEVLPYPAKDL 206
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
K ++RV F R+K V L K +LE + P +RP L++Q+F
Sbjct: 207 KWLDRVCREGFNQRRKTVRNCYKSLIDK-------DVLEELGINPSMRPENLTLQQF 256
>gi|322373748|ref|ZP_08048284.1| dimethyladenosine transferase [Streptococcus sp. C150]
gi|321278790|gb|EFX55859.1| dimethyladenosine transferase [Streptococcus sp. C150]
Length = 290
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 3/116 (2%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ T R P++++ + RV F
Sbjct: 172 LSIAVQYYMTAKVAFVVPHTVFVPAPNVDSAILKMTRREQPLVEVKDEDFFFRVSKISFV 231
Query: 72 YRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEFGQICLAYRD 125
+R+K ++ + F K + + + LE A +KP +R LS+ +F ++ A R+
Sbjct: 232 HRRKTLWNNLTSHFGKSEEVKAKLEQALENANIKPSIRGEALSITDFARLSDALRE 287
>gi|399046071|ref|ZP_10738608.1| dimethyladenosine transferase [Brevibacillus sp. CF112]
gi|398055856|gb|EJL47906.1| dimethyladenosine transferase [Brevibacillus sp. CF112]
Length = 298
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 2/120 (1%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-L 61
A G + LS+ Q + + +P FIP+P VD V+ R P +D+ + +
Sbjct: 168 AKPGTKDYGSLSVAAQFYAETEVAMIVPASVFIPRPNVDSAVIRLKVRDRPPVDVDDQDV 227
Query: 62 IERVVSCIFRYRQKQVYKP-ASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
RVV F R+K + + LF K ++ V+ +L ++P R LS++EF ++
Sbjct: 228 FFRVVRSSFAQRRKTLLNNLMNGLFLKTQKDEVIQMLADIGIEPTRRGETLSIEEFARLA 287
>gi|374339957|ref|YP_005096693.1| dimethyladenosine transferase [Marinitoga piezophila KA3]
gi|372101491|gb|AEX85395.1| dimethyladenosine transferase [Marinitoga piezophila KA3]
Length = 269
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 57/116 (49%), Gaps = 6/116 (5%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
M+A G + LSI Q +C V+ +P AFIP P+VD V+ TP+ I D+ K
Sbjct: 146 MMAKSG-KNYSPLSIFVQFFCKVEKVLNVPPHAFIPNPKVDSVVLKLTPK-EDIPDINKK 203
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+ V F R+K + L R + LLE++ + P RP +S+++F
Sbjct: 204 GFFKFVHVAFSQRRKTIRNNLKGLIKDR----LDELLEKSDIDPKTRPENISIEKF 255
>gi|417515210|ref|ZP_12178808.1| Dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Uganda str. R8-3404]
gi|417536506|ref|ZP_12189639.1| Dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Wandsworth str. A4-580]
gi|353655880|gb|EHC96776.1| Dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Uganda str. R8-3404]
gi|353670219|gb|EHD06896.1| Dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Wandsworth str. A4-580]
Length = 273
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 57/123 (46%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +C V +P AF P P+VD VV P V +P+ D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCQVIPVLEVPPSAFTPPPKVDSAVVRLVPHVTMPYPVKDI 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V L + P +R +SV ++
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VETLTEMGIDPAMRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QMA 261
>gi|340399677|ref|YP_004728702.1| dimethyladenosine transferase [Streptococcus salivarius CCHSS3]
gi|387760519|ref|YP_006067496.1| dimethyladenosine transferase [Streptococcus salivarius 57.I]
gi|338743670|emb|CCB94180.1| dimethyladenosine transferase (S-adenosylmethionine-6-N ,
N-adenosyl(rRNA) dimethyltransferase) (16S rRNA
dimethylase) (High level kasugamycin resistance protein
ksgA) (Kasugamycin dimethyltransferase) [Streptococcus
salivarius CCHSS3]
gi|339291286|gb|AEJ52633.1| dimethyladenosine transferase [Streptococcus salivarius 57.I]
Length = 290
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 3/116 (2%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ T R P++++ + + RV F
Sbjct: 172 LSIAVQYYMTAKVAFIVPRTVFVPAPNVDSAILKMTRREQPLVEVKDEDFLFRVAKASFV 231
Query: 72 YRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEFGQICLAYRD 125
+R+K ++ + F K + + + LE A +KP +R LS+ +F + A R+
Sbjct: 232 HRRKTLWNNLTNHFGKSEEVKSKLEKALEIADIKPSIRGEALSISDFAHLSDALRE 287
>gi|433544148|ref|ZP_20500538.1| dimethyladenosine transferase [Brevibacillus agri BAB-2500]
gi|432184504|gb|ELK42015.1| dimethyladenosine transferase [Brevibacillus agri BAB-2500]
Length = 298
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 2/120 (1%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-L 61
A G + LS+ Q + + +P FIP+P VD V+ R P +D+ + +
Sbjct: 168 AKPGTKDYGSLSVAAQFYAETEVAMIVPASVFIPRPNVDSAVIRLKVRDRPPVDVDDQDV 227
Query: 62 IERVVSCIFRYRQKQVYKP-ASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
RVV F R+K + + LF K ++ V+ +L ++P R LS++EF ++
Sbjct: 228 FFRVVRSSFAQRRKTLLNNLMNGLFLKTQKDEVIQMLADIGIEPTRRGETLSIEEFARLA 287
>gi|424914730|ref|ZP_18338094.1| dimethyladenosine transferase [Rhizobium leguminosarum bv. trifolii
WSM597]
gi|392850906|gb|EJB03427.1| dimethyladenosine transferase [Rhizobium leguminosarum bv. trifolii
WSM597]
Length = 275
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 55/116 (47%), Gaps = 8/116 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A E + RL ++C F +P +AF P P+V VVH TPR +P I
Sbjct: 161 IVACEDDDHYGRLGVLCGWRTQARMAFDVPPQAFTPPPKVTSTVVHLTPRENP-IPCAVG 219
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+E+V F R+K + + L +R LL +A + P R LSV+EF
Sbjct: 220 NLEKVTQAAFGQRRKMLRQSLKPLGGER-------LLVKAGIDPARRAETLSVEEF 268
>gi|126654253|ref|ZP_01726041.1| dimethyladenosine transferase [Bacillus sp. B14905]
gi|126589286|gb|EAZ83444.1| dimethyladenosine transferase [Bacillus sp. B14905]
Length = 294
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 56/129 (43%), Gaps = 11/129 (8%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G ++ LSI Q + + T+P F+P+P VD V+ P P K
Sbjct: 163 ITAKPGTKEYGSLSIAIQYYVKAEIAMTVPKTVFMPQPNVDSAVIRLIKYDEP----PVK 218
Query: 61 LIER-----VVSCIFRYRQKQVYKPASLLFPKRKRQ--LVVSLLERACVKPILRPYQLSV 113
+I V F R+K +Y P K Q ++ L A ++P R L++
Sbjct: 219 VINEDFLFVVTRASFVQRRKTIYNNLQSGLPNGKAQKDFILEALTAASIEPTRRGETLTI 278
Query: 114 QEFGQICLA 122
QEFG++ A
Sbjct: 279 QEFGKLADA 287
>gi|157147529|ref|YP_001454848.1| dimethyladenosine transferase [Citrobacter koseri ATCC BAA-895]
gi|166221659|sp|A8ALP9.1|RSMA_CITK8 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|157084734|gb|ABV14412.1| hypothetical protein CKO_03329 [Citrobacter koseri ATCC BAA-895]
Length = 273
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 57/123 (46%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +C V +P AF P P+VD VV P +P+ D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCQVIPVLEVPPSAFTPPPKVDSAVVRLVPHTTMPYPVKDI 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V +L + P LR +SV ++
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VEVLTELGIDPALRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QMA 261
>gi|261250207|ref|ZP_05942783.1| dimethyladenosine transferase [Vibrio orientalis CIP 102891 = ATCC
33934]
gi|417953291|ref|ZP_12596338.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Vibrio orientalis CIP 102891 = ATCC 33934]
gi|260939323|gb|EEX95309.1| dimethyladenosine transferase [Vibrio orientalis CIP 102891 = ATCC
33934]
gi|342817466|gb|EGU52347.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Vibrio orientalis CIP 102891 = ATCC 33934]
Length = 268
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G + RL++M Q +C V +P AF+P P+VD VV P HP+ DL
Sbjct: 147 LAAGPGTKAYGRLTVMAQYFCKVVPVLEVPPTAFVPPPKVDSAVVRLVPYEEIPHPVSDL 206
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
K ++RV F R+K V L L +LE + P +RP L++ +F
Sbjct: 207 --KYLDRVCREGFNQRRKTVRNCYKGL-------LSAEVLEELGINPSMRPENLTLVQFV 257
Query: 118 QIC 120
++
Sbjct: 258 EMA 260
>gi|424890988|ref|ZP_18314587.1| dimethyladenosine transferase [Rhizobium leguminosarum bv. trifolii
WSM2012]
gi|393173206|gb|EJC73251.1| dimethyladenosine transferase [Rhizobium leguminosarum bv. trifolii
WSM2012]
Length = 275
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 55/116 (47%), Gaps = 8/116 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A E + RL ++C F +P +AF P P+V VVH TPR +P I
Sbjct: 161 IVACEDDDHYGRLGVLCGWRTEARMAFDVPPQAFTPPPKVTSTVVHLTPRENP-IPCAVG 219
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+E+V F R+K + + L +R LL +A + P R LSV+EF
Sbjct: 220 NLEKVTQAAFGQRRKMLRQSLKPLGGER-------LLVKAGIDPARRAETLSVEEF 268
>gi|27904634|ref|NP_777760.1| dimethyladenosine transferase [Buchnera aphidicola str. Bp
(Baizongia pistaciae)]
gi|29839464|sp|P59524.1|RSMA_BUCBP RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|27904031|gb|AAO26865.1| dimethyladenosine transferase [Buchnera aphidicola str. Bp
(Baizongia pistaciae)]
Length = 260
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 11/128 (8%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPR-VHPIIDLPF 59
++A G + RLSI+ Q +C++D F + ++F P P+V V PR V +
Sbjct: 143 LLAIPGTKSYSRLSIIAQYYCDIDFLFDVVAQSFYPIPKVTSSFVRLVPRKVFNLYVRDI 202
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
+ V + F+ R+K V S LF L + + P+LR LSV+++
Sbjct: 203 NQLSNVTALAFQQRRKIVKNSLSSLFNDDA-------LRKLGIDPLLRAENLSVKQY--- 252
Query: 120 CLAYRDMC 127
CL +C
Sbjct: 253 CLLSNHVC 260
>gi|83312817|ref|YP_423081.1| dimethyladenosine transferase [Magnetospirillum magneticum AMB-1]
gi|119365030|sp|Q2W0V3.1|RSMA_MAGSA RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|82947658|dbj|BAE52522.1| Dimethyladenosine transferase [Magnetospirillum magneticum AMB-1]
Length = 281
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 48/109 (44%), Gaps = 6/109 (5%)
Query: 8 EQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFKLIERVVS 67
E RLS++ Q C V F + +AF P P V VV PR P+ F+ +ERV +
Sbjct: 161 EHYGRLSVITQWRCEVRPLFNVDRRAFTPPPAVTSTVVDLIPRAEPLAPARFETLERVTA 220
Query: 68 CIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
F R+K + L LLER + P R ++ V+ F
Sbjct: 221 AAFGQRRKMLRSSLKSLGGAE------DLLERTGILPTARAEEIPVEGF 263
>gi|339053618|ref|ZP_08648288.1| Dimethyladenosine transferase [gamma proteobacterium IMCC2047]
gi|330721180|gb|EGG99294.1| Dimethyladenosine transferase [gamma proteobacterium IMCC2047]
Length = 112
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 50/106 (47%), Gaps = 8/106 (7%)
Query: 16 MCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVH-PIIDLPFKLIERVVSCIFRYRQ 74
M Q C V+ F +P AF P+P+VD +V TP PI L K + VV+ F R+
Sbjct: 1 MVQYHCQVESLFKVPPTAFDPQPKVDSAIVRLTPYDKPPIPALDHKQLSSVVTTAFNQRR 60
Query: 75 KQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
K + K+ + LE + P LRP +L++Q F I
Sbjct: 61 KTIRN-------NLKKLISTEQLEALGIDPGLRPEKLTLQNFVAIS 99
>gi|258545947|ref|ZP_05706181.1| dimethyladenosine transferase [Cardiobacterium hominis ATCC 15826]
gi|258518825|gb|EEV87684.1| dimethyladenosine transferase [Cardiobacterium hominis ATCC 15826]
Length = 136
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 54/131 (41%), Gaps = 9/131 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDL-PF 59
+ A G + RLS+M Q WC F IP AF P P+VD VV PR P +
Sbjct: 13 ITAAPGSKTYGRLSLMAQLWCETTALFDIPPDAFDPPPKVDSAVVRLVPRPAPAWQIDDL 72
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
E V F R+K + K + + + LE + P R L F ++
Sbjct: 73 ATFEETVRLAFAQRRKMLRKTFA-------HWMNAAALEALDIDPTARAETLDGAAFARL 125
Query: 120 CLA-YRDMCEE 129
A Y+ C++
Sbjct: 126 ANARYQQECQK 136
>gi|424034185|ref|ZP_17773592.1| dimethyladenosine transferase [Vibrio cholerae HENC-01]
gi|408873336|gb|EKM12534.1| dimethyladenosine transferase [Vibrio cholerae HENC-01]
Length = 269
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 56/119 (47%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVH---PIIDL 57
+ A G + RL++M Q +C V +P AF+P P+VD VV P P DL
Sbjct: 147 LAAGPGSKAYGRLTVMAQYYCKVVPVLEVPPTAFVPPPKVDSAVVRLVPYEELPCPAKDL 206
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+L+ERV F R+K V L L +LE + P +RP L++Q+F
Sbjct: 207 --RLLERVCREGFNQRRKTVRNCYKSL-------LSTEVLEELGINPGMRPENLTLQQF 256
>gi|357639797|ref|ZP_09137670.1| dimethyladenosine transferase [Streptococcus urinalis 2285-97]
gi|418417109|ref|ZP_12990307.1| ribosomal RNA small subunit methyltransferase A [Streptococcus
urinalis FB127-CNA-2]
gi|357588251|gb|EHJ57659.1| dimethyladenosine transferase [Streptococcus urinalis 2285-97]
gi|410873165|gb|EKS21101.1| ribosomal RNA small subunit methyltransferase A [Streptococcus
urinalis FB127-CNA-2]
Length = 290
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 3/113 (2%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ T R P++ + + + RV F
Sbjct: 172 LSIAVQYYMTAKVAFVVPKTVFVPAPNVDSAILKMTRREEPLVKVENEDFLFRVAKASFA 231
Query: 72 YRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEFGQICLA 122
+R+K ++ + F K + + LE A ++P +R LS++ FG++ A
Sbjct: 232 HRRKTLWNNLTSHFGKSDEIKLKLTKALEEAEIEPSIRGEALSIESFGKLADA 284
>gi|404330868|ref|ZP_10971316.1| dimethyladenosine transferase [Sporolactobacillus vineae DSM 21990
= SL153]
Length = 294
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 6/122 (4%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVH---PIIDLPF 59
A+ G + LSI Q + T+P FIP+P VD V+ R + D PF
Sbjct: 164 ASPGQKSYGSLSIAVQYLADPSIVMTVPRTVFIPQPNVDSAVIRLDIRPEKRVAVTDEPF 223
Query: 60 KLIERVVSCIFRYRQKQVYKP-ASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQ 118
+++ F +R+K + LFPK +++ V+ +LE+A + P R L++ EF +
Sbjct: 224 FF--QIIRASFAHRRKTLMNNLMHQLFPKEQKEAVLDVLEQAGIDPGRRGETLTIDEFAR 281
Query: 119 IC 120
+
Sbjct: 282 LS 283
>gi|157368969|ref|YP_001476958.1| dimethyladenosine transferase [Serratia proteamaculans 568]
gi|166987697|sp|A8G9P0.1|RSMA_SERP5 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|157320733|gb|ABV39830.1| dimethyladenosine transferase [Serratia proteamaculans 568]
Length = 272
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RL++M Q +CNV +P +F P P+VD VV P + +P+ D+
Sbjct: 148 LVAGPNSKAYGRLTVMAQYYCNVIPVLEVPPTSFTPAPKVDSAVVRLVPHLVNPNPVGDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+++ R+ + F R+K V LF + L + PILR +SV ++
Sbjct: 208 --RMLSRITTQAFNQRRKTVRNSLGDLFTPEQ-------LTELGIDPILRAENISVAQY 257
>gi|221135222|ref|ZP_03561525.1| dimethyladenosine transferase [Glaciecola sp. HTCC2999]
Length = 267
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 8/121 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLP-F 59
+ A G + RLS+M Q +C V +P +AF P P+VD VV P P +++
Sbjct: 145 LAARPGHKNYGRLSVMAQYYCTVVPVIEVPPEAFTPPPKVDSAVVRLIPHQTPPVEVNEL 204
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
K +E+V + F R+K + K + +L + P+ R LS+ +F I
Sbjct: 205 KALEKVTALAFNQRRKTIRN-------SLKSVIDADVLTSIGIDPVWRAEGLSLAQFALI 257
Query: 120 C 120
Sbjct: 258 A 258
>gi|410453253|ref|ZP_11307211.1| ribosomal RNA small subunit methyltransferase A [Bacillus
bataviensis LMG 21833]
gi|409933376|gb|EKN70304.1| ribosomal RNA small subunit methyltransferase A [Bacillus
bataviensis LMG 21833]
Length = 292
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 3/121 (2%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-L 61
A G + LSI Q + + +P F+P+P VD V+ T R P + + +
Sbjct: 164 AKPGTKDYGSLSIAIQYYTEAETVMIVPKTVFVPQPNVDSAVIRLTKREKPAVSVKDEAF 223
Query: 62 IERVVSCIFRYRQKQVYKPASLLFP--KRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
+V F R+K + + P K+K++ +++ L+ + V+P R LS++EFG++
Sbjct: 224 FFQVTRSSFAQRRKTLLNNLTSQLPDGKQKKEEILAALDASGVEPSRRGETLSLEEFGRL 283
Query: 120 C 120
Sbjct: 284 A 284
>gi|358011360|ref|ZP_09143170.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Acinetobacter sp. P8-3-8]
Length = 270
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 55/117 (47%), Gaps = 8/117 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV-HPIIDLPF 59
+ A+ ++ RLS+M Q +C F +P +F P P+V V P PI+
Sbjct: 152 ITASPNTKEYGRLSVMIQYFCKPTFLFEVPPGSFNPPPKVTSAVFRLEPYADKPIVAKNE 211
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
K + R+VS +F R+K + K LV E+A V P+ RP LS+ +F
Sbjct: 212 KALARLVSHVFTQRRKTLRN-------SLKGMLVEDGFEKAGVDPMARPETLSLAQF 261
>gi|148244651|ref|YP_001219345.1| dimethyladenosine transferase [Candidatus Vesicomyosocius okutanii
HA]
gi|146326478|dbj|BAF61621.1| dimethyladenosine transferase [Candidatus Vesicomyosocius okutanii
HA]
Length = 254
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
M A G + RLS+M Q + N++ FT+P ++F P P+VD +V+ P P K
Sbjct: 139 MGANSGSKVYGRLSVMMQTFFNINMIFTVPPESFNPVPRVDSAIVYLKPLAQPKTK-NIK 197
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERA 100
+ E+VV F R+K + SL + ++Q + L RA
Sbjct: 198 VFEKVVKLAFSQRRKMLRN--SLKYVLTQKQTDIDLSRRA 235
>gi|409395477|ref|ZP_11246547.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas sp. Chol1]
gi|409395572|ref|ZP_11246637.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas sp. Chol1]
gi|409119838|gb|EKM96211.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas sp. Chol1]
gi|409119859|gb|EKM96231.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas sp. Chol1]
Length = 264
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 52/119 (43%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 144 LAAEPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPAPKVDSAIVRLVPHETLPHPARD- 202
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+ +ERVV F R+K + L L +E A V LRP QL + F
Sbjct: 203 -HRQLERVVREAFNQRRKTLRNTLKGL-------LDAEAIEAAQVDGGLRPEQLDLAAF 253
>gi|347727189|gb|AEP19952.1| dimethyladenosine transferase [Bacillus sp. 15.4]
Length = 227
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 3/121 (2%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF-KL 61
A G ++ LSI Q + + + +P F+P+P VD V+ R P + +
Sbjct: 99 AKPGTKEYGSLSIAIQFYTHAETVMIVPKTVFMPQPNVDSAVIRLMKRDKPAAQVDDEEF 158
Query: 62 IERVVSCIFRYRQKQVYKPASLLFP--KRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
+V F R+K + + P K+K+ + + LERA V P R LS+QEF +
Sbjct: 159 FFKVTRASFAQRRKTILNNLTSQLPDGKQKKDEITASLERAGVDPGRRGETLSIQEFANL 218
Query: 120 C 120
Sbjct: 219 S 219
>gi|407694817|ref|YP_006819605.1| ribosomal RNA small subunit methyltransferase A [Alcanivorax
dieselolei B5]
gi|407252155|gb|AFT69262.1| Ribosomal RNA small subunit methyltransferase A [Alcanivorax
dieselolei B5]
Length = 257
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 55/125 (44%), Gaps = 12/125 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G RLS+M Q C D+ F +P AF P P+VD VV TP H + P +
Sbjct: 140 LTAAPGTSDYGRLSVMVQYHCQADYLFFVPPGAFQPPPKVDSAVVRLTP--HATVPWPAR 197
Query: 61 ---LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+ ++V+ F R+K V L + + + P LRP LSV ++
Sbjct: 198 DPVYLGKLVNQAFTQRRKAVRNALKTLVEP-------DIFDALGIDPGLRPDHLSVADYV 250
Query: 118 QICLA 122
+ A
Sbjct: 251 ALANA 255
>gi|387128065|ref|YP_006296670.1| dimethyladenosine transferase [Methylophaga sp. JAM1]
gi|386275127|gb|AFI85025.1| Dimethyladenosine transferase [Methylophaga sp. JAM1]
Length = 264
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 60/115 (52%), Gaps = 8/115 (6%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPI-IDLPFKL 61
A G + RLSIM Q C V+ F +P AF P P+V+ +++ PR + D+ K
Sbjct: 148 AAPGNKSYGRLSIMIQYQCMVEQLFIVPPTAFDPPPKVESAIIYIQPRKQFLGGDVCIKT 207
Query: 62 IERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+ +V+ F R+K + A+ L K + ++ LE + P LRP +SV+++
Sbjct: 208 LGNLVTQAFSQRRKTI---ANTL----KNSVSLAALEDQGIDPKLRPETISVEQY 255
>gi|422019986|ref|ZP_16366528.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Providencia alcalifaciens Dmel2]
gi|414102610|gb|EKT64202.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Providencia alcalifaciens Dmel2]
Length = 269
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 55/119 (46%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A G + RLS+M Q +CNV +P AF P P+VD VV P +P+ D+
Sbjct: 148 LVAGPGSKAYGRLSVMAQYYCNVVPVLEVPPTAFAPPPKVDSAVVRLIPHKENPYPVKDI 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
K++ R+ + F R+K V LF V L + P R +SV+ +
Sbjct: 208 --KVLSRITTQAFNQRRKTVRNSLGDLFS-------VEQLTELGIDPGTRAENISVEHY 257
>gi|422650761|ref|ZP_16713562.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. actinidiae str. M302091]
gi|330963845|gb|EGH64105.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. actinidiae str. M302091]
Length = 268
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 55/123 (44%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
M A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 145 MAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPYETLPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++E+VV F R+K + LL + + + V LRP QL + F
Sbjct: 204 -HRVLEQVVREAFNQRRKTLRNTLKLLLSSDE-------ITASGVDGSLRPEQLDLAAFV 255
Query: 118 QIC 120
++
Sbjct: 256 RLA 258
>gi|424894420|ref|ZP_18317994.1| dimethyladenosine transferase [Rhizobium leguminosarum bv. trifolii
WSM2297]
gi|393178647|gb|EJC78686.1| dimethyladenosine transferase [Rhizobium leguminosarum bv. trifolii
WSM2297]
Length = 275
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 55/116 (47%), Gaps = 8/116 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A E + RL ++C F +P +AF P P+V VVH TPR +P I
Sbjct: 161 IVACEDDDHYGRLGVLCGWRTEARMAFDVPPQAFTPPPKVTSTVVHLTPRDNP-IPCAVG 219
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+E+V F R+K + + L + SLL +A + P R LSV+EF
Sbjct: 220 NLEKVTQAAFGQRRKMLRQSLKPLGGE-------SLLVKAGIDPARRAETLSVEEF 268
>gi|426401389|ref|YP_007020361.1| dimethyladenosine transferase [Candidatus Endolissoclinum patella
L2]
gi|425858057|gb|AFX99093.1| dimethyladenosine transferase [Candidatus Endolissoclinum patella
L2]
Length = 274
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 7/128 (5%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+IA G + RLS++ C I AFIP P++ +V PRV P+
Sbjct: 152 LIANPGSKIYGRLSVLVSWLCTTQKLMNISPNAFIPPPKICSSLVRLVPRVTPLAAANRD 211
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
++E + F R+K +L K+ V+L++ A + RP L+V+EF ++
Sbjct: 212 ILEYITKAAFSQRRK-------MLRQSLKKLGGVTLIQAADLNHTSRPENLTVKEFCRLA 264
Query: 121 LAYRDMCE 128
AY + +
Sbjct: 265 NAYSKLNQ 272
>gi|228476972|ref|ZP_04061610.1| dimethyladenosine transferase [Streptococcus salivarius SK126]
gi|228250991|gb|EEK10162.1| dimethyladenosine transferase [Streptococcus salivarius SK126]
Length = 290
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 3/116 (2%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ T R P++++ + + RV F
Sbjct: 172 LSIAVQYYMTAKVAFIVPRTVFVPAPNVDSAILKMTRREQPLVEVKDEDFLFRVAKASFV 231
Query: 72 YRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEFGQICLAYRD 125
+R+K ++ + F K + + + LE A +KP +R LS+ +F + A R+
Sbjct: 232 HRRKTLWNNLTNHFGKSEEVKAKLEQALEIADIKPSIRGEALSISDFAHLSDALRE 287
>gi|289551708|ref|YP_003472612.1| Dimethyladenosine transferase [Staphylococcus lugdunensis HKU09-01]
gi|315660340|ref|ZP_07913193.1| dimethyladenosine transferase [Staphylococcus lugdunensis M23590]
gi|385785255|ref|YP_005761428.1| ribosomal RNA adenine dimethylase [Staphylococcus lugdunensis
N920143]
gi|418416026|ref|ZP_12989228.1| ribosomal RNA small subunit methyltransferase A [Staphylococcus
lugdunensis ACS-027-V-Sch2]
gi|289181239|gb|ADC88484.1| Dimethyladenosine transferase [Staphylococcus lugdunensis HKU09-01]
gi|315494629|gb|EFU82971.1| dimethyladenosine transferase [Staphylococcus lugdunensis M23590]
gi|339895511|emb|CCB54840.1| ribosomal RNA adenine dimethylase [Staphylococcus lugdunensis
N920143]
gi|410872936|gb|EKS20873.1| ribosomal RNA small subunit methyltransferase A [Staphylococcus
lugdunensis ACS-027-V-Sch2]
Length = 296
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 56/124 (45%), Gaps = 11/124 (8%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLP---- 58
AT G + LSI+ Q + T+P F+P P VD VV R P++D+
Sbjct: 165 ATVGTKAYGSLSIVTQYYTETSKVVTVPKSVFMPPPNVDSIVVKLMQRSQPLVDIDDETA 224
Query: 59 -FKLIERVVSCIFRYRQKQVYKPASLLFP--KRKRQLVVSLLERACVKPILRPYQLSVQE 115
FKL F R+K + F K+ ++ ++S L A + P R LS+Q+
Sbjct: 225 FFKL----AKAAFAQRRKTINNNYQNHFKDGKKHKEAILSWLNAAEIDPKRRGETLSIQD 280
Query: 116 FGQI 119
F ++
Sbjct: 281 FARL 284
>gi|227509274|ref|ZP_03939323.1| dimethyladenosine transferase [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
gi|227512287|ref|ZP_03942336.1| dimethyladenosine transferase [Lactobacillus buchneri ATCC 11577]
gi|227084462|gb|EEI19774.1| dimethyladenosine transferase [Lactobacillus buchneri ATCC 11577]
gi|227191272|gb|EEI71339.1| dimethyladenosine transferase [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
Length = 301
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 67/129 (51%), Gaps = 7/129 (5%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF--- 59
A G + LS++ Q +VD F +P AFIP+P+VD +V +P++ + PF
Sbjct: 171 AKPGTKPYGSLSVIVQQQNDVDISFVVPKTAFIPQPKVDSAIVKLSPKMQ-VDKRPFDHK 229
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEFG 117
K + V C F +++K ++ +F K++ + + +L+ + RP QL V++F
Sbjct: 230 KFVGFVRGC-FMHQRKTLWNNLLGVFGKQESVKGQIKKVLDDLSINAANRPEQLQVEQFV 288
Query: 118 QICLAYRDM 126
+ A+ ++
Sbjct: 289 ALTNAFHEI 297
>gi|16763480|ref|NP_459095.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|378982632|ref|YP_005245787.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|20141600|sp|Q56016.2|RSMA_SALTY RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|16418587|gb|AAL19054.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase;
kasugamycin resistance [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|312911060|dbj|BAJ35034.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
Length = 273
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A ++ RLS+M Q +C V +P AF P P+VD VV P +P+ D+
Sbjct: 148 LVAGPNSKEYGRLSVMAQYYCQVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPYPVKDI 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V L + P +R +SV ++
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VETLTEMGIDPAMRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QMA 261
>gi|237803359|ref|ZP_04590944.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. oryzae str. 1_6]
gi|331025340|gb|EGI05396.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. oryzae str. 1_6]
Length = 268
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 53/121 (43%), Gaps = 8/121 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPR-VHPIIDLPF 59
M A G RLSIM Q C V+H F + AF P P+VD +V P P
Sbjct: 145 MAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPHETLPHQAKDH 204
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
+++ERVV F R+K + LL + + + V LRP QL + F ++
Sbjct: 205 RVLERVVREAFNQRRKTLRNTLKLLLSSDE-------ITASGVDGSLRPEQLDLAAFVRL 257
Query: 120 C 120
Sbjct: 258 A 258
>gi|419955704|ref|ZP_14471828.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas stutzeri TS44]
gi|387967509|gb|EIK51810.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas stutzeri TS44]
Length = 262
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 52/119 (43%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 142 LAAEPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPAPKVDSAIVRLVPHETLPHPARD- 200
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+ +ERVV F R+K + L + +E A V LRP QL + F
Sbjct: 201 -HRQLERVVREAFNQRRKTLRNTLKGLLDAQD-------IEAAQVDGGLRPEQLDLAAF 251
>gi|418635173|ref|ZP_13197557.1| dimethyladenosine transferase [Staphylococcus lugdunensis VCU139]
gi|374842122|gb|EHS05569.1| dimethyladenosine transferase [Staphylococcus lugdunensis VCU139]
Length = 296
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 56/124 (45%), Gaps = 11/124 (8%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLP---- 58
AT G + LSI+ Q + T+P F+P P VD VV R P++D+
Sbjct: 165 ATVGTKAYGSLSIVTQYYTETSKVVTVPKSVFMPPPNVDSIVVKLMQRSQPLVDIDDETA 224
Query: 59 -FKLIERVVSCIFRYRQKQVYKPASLLFP--KRKRQLVVSLLERACVKPILRPYQLSVQE 115
FKL F R+K + F K+ ++ ++S L A + P R LS+Q+
Sbjct: 225 FFKL----AKAAFAQRRKTINNNYQNHFKDGKKHKEAILSWLNAAEIDPKRRGETLSIQD 280
Query: 116 FGQI 119
F ++
Sbjct: 281 FARL 284
>gi|149182822|ref|ZP_01861284.1| dimethyladenosine transferase [Bacillus sp. SG-1]
gi|148849489|gb|EDL63677.1| dimethyladenosine transferase [Bacillus sp. SG-1]
Length = 292
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 3/121 (2%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-L 61
A G ++ LSI Q + + +P F+P+P VD V+ R P ++ +
Sbjct: 164 AKPGTKEYGSLSIAIQYYTTAETVMIVPKTVFMPQPNVDSAVIRLMKRDKPAAEVDDEDF 223
Query: 62 IERVVSCIFRYRQKQVYKPASLLFP--KRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
+V F R+K + + P K+K++ +++ LE+A V P R LS+QEF +
Sbjct: 224 FFKVTRASFAQRRKTILNNLTSQLPDGKQKKEEILASLEKAGVDPGRRGETLSIQEFALL 283
Query: 120 C 120
Sbjct: 284 S 284
>gi|28897110|ref|NP_796715.1| dimethyladenosine transferase [Vibrio parahaemolyticus RIMD
2210633]
gi|153838977|ref|ZP_01991644.1| dimethyladenosine transferase [Vibrio parahaemolyticus AQ3810]
gi|260361684|ref|ZP_05774711.1| dimethyladenosine transferase [Vibrio parahaemolyticus K5030]
gi|260878023|ref|ZP_05890378.1| dimethyladenosine transferase [Vibrio parahaemolyticus AN-5034]
gi|260896918|ref|ZP_05905414.1| dimethyladenosine transferase [Vibrio parahaemolyticus Peru-466]
gi|260903390|ref|ZP_05911785.1| dimethyladenosine transferase [Vibrio parahaemolyticus AQ4037]
gi|417321228|ref|ZP_12107768.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Vibrio parahaemolyticus 10329]
gi|433656660|ref|YP_007274039.1| Dimethyladenosine transferase [Vibrio parahaemolyticus BB22OP]
gi|31340184|sp|Q87ST6.1|RSMA_VIBPA RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|28805319|dbj|BAC58599.1| dimethyladenosine transferase [Vibrio parahaemolyticus RIMD
2210633]
gi|149747565|gb|EDM58497.1| dimethyladenosine transferase [Vibrio parahaemolyticus AQ3810]
gi|308088709|gb|EFO38404.1| dimethyladenosine transferase [Vibrio parahaemolyticus Peru-466]
gi|308090066|gb|EFO39761.1| dimethyladenosine transferase [Vibrio parahaemolyticus AN-5034]
gi|308109049|gb|EFO46589.1| dimethyladenosine transferase [Vibrio parahaemolyticus AQ4037]
gi|308115492|gb|EFO53032.1| dimethyladenosine transferase [Vibrio parahaemolyticus K5030]
gi|328471908|gb|EGF42785.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Vibrio parahaemolyticus 10329]
gi|432507348|gb|AGB08865.1| Dimethyladenosine transferase [Vibrio parahaemolyticus BB22OP]
Length = 269
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 56/119 (47%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVH---PIIDL 57
+ A G + RL++M Q +C V +P AF+P P+VD VV P P DL
Sbjct: 147 LAAGPGSKAYGRLTVMAQYYCKVVPVLEVPPTAFVPPPKVDSAVVRLVPYEELPCPAKDL 206
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+L++RV F R+K V K L +LE V P +RP L++Q+F
Sbjct: 207 --RLLDRVCREGFNQRRKTVRN-------CYKSLLSAEVLEELGVNPSMRPENLTLQQF 256
>gi|406979374|gb|EKE01174.1| hypothetical protein ACD_21C00200G0007 [uncultured bacterium]
Length = 282
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 8/121 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV-HPIIDLPF 59
+ A G + RLS+M Q +C + + AF P P+VD + PR H ++
Sbjct: 156 ITAPPGSKTYGRLSVMLQYYCETELLLHVGSGAFSPPPKVDSAFIRLIPRKHHSVVAQDK 215
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
L+ +V F R+K + K+ + + LE + P+LRP QL V +F +I
Sbjct: 216 ALLSNIVRSAFCQRRKIISNGV-------KKYITATQLEDIGINPMLRPEQLGVDDFVRI 268
Query: 120 C 120
Sbjct: 269 S 269
>gi|194364446|ref|YP_002027056.1| dimethyladenosine transferase [Stenotrophomonas maltophilia R551-3]
gi|194347250|gb|ACF50373.1| dimethyladenosine transferase [Stenotrophomonas maltophilia R551-3]
Length = 267
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 55/125 (44%), Gaps = 14/125 (11%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDL-PF 59
M A G + RLS+M Q +C V F +P AF P P+VD VV PR I++
Sbjct: 151 MAAGPGSKVFGRLSVMLQAYCEVTSLFVVPPGAFRPPPKVDSAVVRLVPRDPATINIRDH 210
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSL--LERACVKPILRPYQLSVQEFG 117
K VV F R+K + + VVS A V+P R QL V EF
Sbjct: 211 KRFAEVVKAAFGQRRKTL---------RNALNNVVSAEQFAAAGVRPDARAEQLDVAEF- 260
Query: 118 QICLA 122
I LA
Sbjct: 261 -IALA 264
>gi|319784428|ref|YP_004143904.1| dimethyladenosine transferase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317170316|gb|ADV13854.1| dimethyladenosine transferase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 279
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 8/122 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A G + RL ++ F +P +AF P P+V VVH PR P + K
Sbjct: 165 IVAPAGSDSYGRLGVLAGWRTEARIAFDVPPQAFTPPPKVTSSVVHLVPRPMP-LPTEVK 223
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
+ RV F R+K + + L + +LL+RA + P R LSV+EF ++
Sbjct: 224 KLGRVTEAAFGQRRKMLRQSVKSLGGE-------ALLDRAGIDPTRRAETLSVEEFVRLT 276
Query: 121 LA 122
A
Sbjct: 277 NA 278
>gi|262369199|ref|ZP_06062527.1| S-adenosylmethionine-6-N',N'-adenosyl dimethyltransferase
[Acinetobacter johnsonii SH046]
gi|381198609|ref|ZP_09905947.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Acinetobacter lwoffii WJ10621]
gi|262315267|gb|EEY96306.1| S-adenosylmethionine-6-N',N'-adenosyl dimethyltransferase
[Acinetobacter johnsonii SH046]
Length = 270
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 8/117 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPF 59
+ A+ ++ RLS+M Q +C F +P +F P P+V V P V PI+
Sbjct: 152 ITASPNSKEYGRLSVMIQYFCKPTFLFEVPPGSFNPPPKVTSAVFRLEPYAVKPIVAKNE 211
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
K + R+VS +F R+K + K LV E+A V P+ RP L++ +F
Sbjct: 212 KALARLVSHVFTQRRKTLRN-------SLKGMLVEDGFEQAGVDPMARPETLTLAQF 261
>gi|407069881|ref|ZP_11100719.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Vibrio cyclitrophicus ZF14]
Length = 271
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 8/117 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPF 59
+ A G + RL++M Q +C V +P AF+P P+VD VV P V P
Sbjct: 147 LAAGPGTKAYGRLTVMAQYYCKVTPVLEVPPTAFVPPPKVDSAVVRLQPYEVLPYPAKDL 206
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
K ++RV F R+K V L K +LE V P +RP L++++F
Sbjct: 207 KWLDRVCREGFNQRRKTVRNCYKSLISK-------EVLEELGVNPGMRPENLTLEQF 256
>gi|408822272|ref|ZP_11207162.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas geniculata N1]
gi|424667125|ref|ZP_18104150.1| ribosomal RNA small subunit methyltransferase A [Stenotrophomonas
maltophilia Ab55555]
gi|401069794|gb|EJP78315.1| ribosomal RNA small subunit methyltransferase A [Stenotrophomonas
maltophilia Ab55555]
Length = 267
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 55/123 (44%), Gaps = 10/123 (8%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDL-PF 59
M A G + RLS+M Q +C V F +P AF P P+VD VV PR I++
Sbjct: 151 MAAGPGSKVYGRLSVMLQAYCQVTSLFVVPPGAFRPPPKVDSAVVRLVPRDPATININDH 210
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
K VV F R+K + + + Q V A V+P R QL V EF I
Sbjct: 211 KRFAEVVKAAFGQRRKTLRNALNNVV--SAEQFVA-----AGVRPDARAEQLDVAEF--I 261
Query: 120 CLA 122
LA
Sbjct: 262 ALA 264
>gi|84393695|ref|ZP_00992445.1| dimethyladenosine transferase [Vibrio splendidus 12B01]
gi|84375694|gb|EAP92591.1| dimethyladenosine transferase [Vibrio splendidus 12B01]
Length = 271
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 8/117 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPF 59
+ A G + RL++M Q +C V +P AF+P P+VD VV P V P
Sbjct: 147 LAAGPGTKAYGRLTVMAQYYCKVTPVLEVPPTAFVPPPKVDSAVVRLQPYEVLPYPAKDL 206
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
K ++RV F R+K V L K +LE V P +RP L++++F
Sbjct: 207 KWLDRVCREGFNQRRKTVRNCYKSLIDK-------EVLEELGVNPGMRPENLTLEQF 256
>gi|456738016|gb|EMF62693.1| Dimethyladenosine transferase [Stenotrophomonas maltophilia EPM1]
Length = 267
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 55/123 (44%), Gaps = 10/123 (8%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDL-PF 59
M A G + RLS+M Q +C V F +P AF P P+VD VV PR I++
Sbjct: 151 MAAGPGSKVYGRLSVMLQAYCQVTSLFVVPPGAFRPPPKVDSAVVRLVPRDPATININDH 210
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
K VV F R+K + + + Q V A V+P R QL V EF I
Sbjct: 211 KRFAEVVKAAFGQRRKTLRNALNNVV--SAEQFVA-----AGVRPDARAEQLDVAEF--I 261
Query: 120 CLA 122
LA
Sbjct: 262 ALA 264
>gi|317046866|ref|YP_004114514.1| dimethyladenosine transferase [Pantoea sp. At-9b]
gi|316948483|gb|ADU67958.1| dimethyladenosine transferase [Pantoea sp. At-9b]
Length = 274
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 60/134 (44%), Gaps = 12/134 (8%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A G + RLS+M Q +C V +P ++F P P+VD VV P HP+ D+
Sbjct: 148 LVAGPGSKAYGRLSVMAQYYCQVIPVLEVPPQSFTPPPKVDSAVVRLVPYAQPQHPVSDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+L+ R+ + F R+K + LF L+ + LR +SV ++
Sbjct: 208 --RLLSRITTEAFGQRRKTLRNSLGHLF-------AAGALDALNIDASLRAENVSVAQYC 258
Query: 118 QICLAYRDMCEEMP 131
Q+ + E P
Sbjct: 259 QLANWLGNHQAENP 272
>gi|392988704|ref|YP_006487297.1| KsgA/Dim1 family 16S ribosomal RNA methyltransferase [Enterococcus
hirae ATCC 9790]
gi|392336124|gb|AFM70406.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Enterococcus hirae ATCC 9790]
Length = 296
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 3/130 (2%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF-KL 61
A G + LSI Q + F +P F+P+P VD ++ T R P + + K
Sbjct: 166 AKPGTKAYGSLSIAVQYFMEASVAFIVPKTVFVPQPNVDSAILKLTRRKQPAVAVTDEKA 225
Query: 62 IERVVSCIFRYRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEFGQI 119
R+ F+ R+K ++ + K + + + + LE+A + P R LS+ EF +
Sbjct: 226 FFRLTKAAFQQRRKTLWNNLQSSYGKDEATKAWLTTSLEKANIDPKRRGETLSLAEFAAL 285
Query: 120 CLAYRDMCEE 129
A ++ E+
Sbjct: 286 SNAMEELSEK 295
>gi|407774468|ref|ZP_11121766.1| Dimethyladenosine transferase [Thalassospira profundimaris WP0211]
gi|407282510|gb|EKF08068.1| Dimethyladenosine transferase [Thalassospira profundimaris WP0211]
Length = 289
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 5/116 (4%)
Query: 12 RLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFKLIERVVSCIFR 71
RLS++CQ C+ D F + AF P P+V VV P+ D+ + ++ F
Sbjct: 177 RLSVLCQYLCDCDILFDVHRSAFTPPPKVTSAVVQLRPKADRGTDINLDSLAKITQAAFG 236
Query: 72 YRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQICLAYRDMC 127
R+K + ASL K V LL +A + +R +LSV +F ++ + +M
Sbjct: 237 QRRKMLR--ASL---KTLNINVGELLAKAGITETVRAEELSVADFVRLTQVHDEMA 287
>gi|86148123|ref|ZP_01066423.1| dimethyladenosine transferase [Vibrio sp. MED222]
gi|218708408|ref|YP_002416029.1| dimethyladenosine transferase [Vibrio splendidus LGP32]
gi|254808268|sp|B7VIE2.1|RSMA_VIBSL RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|85834110|gb|EAQ52268.1| dimethyladenosine transferase [Vibrio sp. MED222]
gi|218321427|emb|CAV17379.1| Dimethyladenosine transferase [Vibrio splendidus LGP32]
Length = 271
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 8/117 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPF 59
+ A G + RL++M Q +C V +P AF+P P+VD VV P V P
Sbjct: 147 LAAGPGTKAYGRLTVMAQYYCKVTPVLEVPPTAFVPPPKVDSAVVRLQPYEVLPYPAKDL 206
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
K ++RV F R+K V L K +LE V P +RP L++++F
Sbjct: 207 KWLDRVCREGFNQRRKTVRNCYKSLIDK-------EVLEELGVNPGMRPENLTLEQF 256
>gi|89101161|ref|ZP_01173994.1| dimethyladenosine transferase [Bacillus sp. NRRL B-14911]
gi|89084129|gb|EAR63297.1| dimethyladenosine transferase [Bacillus sp. NRRL B-14911]
Length = 293
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 7/123 (5%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHP---IIDLPF 59
A G + LSI Q + + +P F+P+P VD V+ T R P + D F
Sbjct: 164 AKPGSKDYGSLSIAVQYYTEAETVMIVPKTVFVPQPNVDSAVIRLTRREQPPVLVKDEAF 223
Query: 60 KLIERVVSCIFRYRQKQVYK--PASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+V F R+K + + L K+K++ +++ LE A ++P R LS+ EFG
Sbjct: 224 FF--QVTKASFAQRRKTILNNLTSQLHEGKQKKEAILAALETAGIEPSRRGETLSIGEFG 281
Query: 118 QIC 120
++
Sbjct: 282 RLS 284
>gi|422877372|ref|ZP_16923842.1| dimethyladenosine transferase [Streptococcus sanguinis SK1056]
gi|332360011|gb|EGJ37825.1| dimethyladenosine transferase [Streptococcus sanguinis SK1056]
Length = 290
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 3/115 (2%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDL-PFKLIERVVSCIFR 71
LSI Q + F +P K F+P P VD ++ R P +++ K +V F
Sbjct: 172 LSIAVQYYMTAKVAFIVPRKVFVPAPNVDSAILKMVRRERPAVEVQDEKFFFKVSKASFV 231
Query: 72 YRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEFGQICLAYR 124
+R+K ++ + F K + + + + LERA + P +R LS++EF ++ A +
Sbjct: 232 HRRKTLWNNLTSYFGKSEETKGKLTAALERAELSPSVRGEALSLEEFARLADALK 286
>gi|429084681|ref|ZP_19147681.1| Dimethyladenosine transferase [Cronobacter condimenti 1330]
gi|426546368|emb|CCJ73722.1| Dimethyladenosine transferase [Cronobacter condimenti 1330]
Length = 273
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 57/123 (46%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +C V +P AF P P+VD VV P V HP+ +L
Sbjct: 148 LVAGPNSKAYGRLSVMAQYFCQVIPVLEVPPSAFTPPPKVDSAVVRLVPHVTPPHPVKEL 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+L+ R+ + F R+K + +F +L + P +R +SV ++
Sbjct: 208 --RLLSRLTTEAFNQRRKTIRNSLGNVFSP-------DVLTSLGIDPAMRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QMA 261
>gi|381405717|ref|ZP_09930401.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pantoea sp. Sc1]
gi|380738916|gb|EIB99979.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pantoea sp. Sc1]
Length = 273
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A G + RL++M Q +C V +P AF P P+VD VV P HP+ D+
Sbjct: 148 LVAGPGSKAYGRLTVMAQYYCQVIPVLEVPPHAFTPPPKVDSAVVRLVPFAEPPHPVSDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + + LE + P LR +SV ++
Sbjct: 208 --RILSRITTEAFGQRRKTLRN-------SLNHMVAAGALEELSIDPGLRAENVSVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QLA 261
>gi|212711197|ref|ZP_03319325.1| hypothetical protein PROVALCAL_02269 [Providencia alcalifaciens DSM
30120]
gi|212686365|gb|EEB45893.1| hypothetical protein PROVALCAL_02269 [Providencia alcalifaciens DSM
30120]
Length = 269
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A G + RLS+M Q +CNV +P AF P P+VD VV P +P+ D+
Sbjct: 148 LVAGPGSKAYGRLSVMAQYYCNVVPVLEVPPTAFAPPPKVDSAVVRLIPHKENPYPVKDI 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
K++ R+ + F R+K + LF V L + P R +SV+ +
Sbjct: 208 --KVLSRITTQAFNQRRKTIRNSLGDLFS-------VEQLTELGIDPGTRAENISVEHY 257
>gi|424042491|ref|ZP_17780198.1| ribosomal RNA small subunit methyltransferase A, partial [Vibrio
cholerae HENC-02]
gi|408889530|gb|EKM27931.1| ribosomal RNA small subunit methyltransferase A, partial [Vibrio
cholerae HENC-02]
Length = 147
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 56/119 (47%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVH---PIIDL 57
+ A G + RL++M Q +C V +P AF+P P+VD VV P P DL
Sbjct: 25 LAAGPGSKAYGRLTVMAQYYCKVVPVLEVPPTAFVPPPKVDSAVVRLVPYEELPCPAKDL 84
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+L+ERV F R+K V K L +LE + P +RP L++Q+F
Sbjct: 85 --RLLERVCREGFNQRRKTVRN-------CYKSLLSTEVLEELGINPGMRPENLTLQQF 134
>gi|398797103|ref|ZP_10556428.1| dimethyladenosine transferase [Pantoea sp. GM01]
gi|398103778|gb|EJL93941.1| dimethyladenosine transferase [Pantoea sp. GM01]
Length = 274
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 59/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A G + RLS+M Q +C V +P ++F P P+VD VV P HP+ D+
Sbjct: 148 LVAGPGSKAYGRLSVMAQYYCQVIPVLEVPPESFTPPPKVDSAVVRLVPYTQPQHPVSDI 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+L+ R+ + F R+K + + +F L++ + LR +SV ++
Sbjct: 208 --RLLSRITTEAFGKRRKTLRNSLAHMF-------AAGALDQLDIDASLRAENVSVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QLA 261
>gi|418027635|ref|ZP_12666258.1| Methyltransferase [Streptococcus thermophilus CNCM I-1630]
gi|354690689|gb|EHE90632.1| Methyltransferase [Streptococcus thermophilus CNCM I-1630]
Length = 182
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ T R P++++ + RV F
Sbjct: 64 LSIAVQYYMTAKVAFAVPRTVFVPAPNVDSAILKMTRRKQPLVEVKDEDFFFRVSKASFL 123
Query: 72 YRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEFGQICLAYRD 125
+R+K ++ + F K + + + LE A +KP +R LS+ +F + A R+
Sbjct: 124 HRRKTLWNNLTSHFGKSEEVKNKLDQALENAAIKPSIRGEALSISDFACLSDALRE 179
>gi|328956557|ref|YP_004373943.1| dimethyladenosine 16S ribosomal RNA transferase [Carnobacterium sp.
17-4]
gi|328672881|gb|AEB28927.1| dimethyladenosine 16S ribosomal RNA transferase [Carnobacterium sp.
17-4]
Length = 297
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 60/130 (46%), Gaps = 3/130 (2%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF- 59
+ A G + LSI Q + + F +P F+P+P VD ++ T R P + +
Sbjct: 164 ITAAPGSKAYGSLSIAIQYYMEAEVAFIVPKTVFVPQPNVDSAIIKLTRRATPSVTVKNE 223
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPK--RKRQLVVSLLERACVKPILRPYQLSVQEFG 117
K +V F R+K ++ + + K R+ + LE A + P R LS++EFG
Sbjct: 224 KSFFALVRSAFVQRRKTLWNNLLIRYGKEDSTREKLTQALEAASIDPKRRGETLSLEEFG 283
Query: 118 QICLAYRDMC 127
++ A ++
Sbjct: 284 RLSDAIDEIV 293
>gi|312865682|ref|ZP_07725906.1| dimethyladenosine transferase [Streptococcus downei F0415]
gi|311098803|gb|EFQ57023.1| dimethyladenosine transferase [Streptococcus downei F0415]
Length = 284
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 11/120 (9%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPII-----DLPFKLIERVVS 67
LSI Q + + F +P F+P P VD ++ T R P+I D F V
Sbjct: 165 LSIAVQYYMSAKVAFIVPRTVFVPAPNVDSAILKMTRRPAPLIAVQDEDFFFD----VAK 220
Query: 68 CIFRYRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEFGQICLAYRD 125
F +R+K ++ + F K + + + + LE A +KP +R LS+Q+FG++ A D
Sbjct: 221 ASFVHRRKTLWNNLTNRFGKEEATKSKLQAALEMAELKPNIRGEALSIQDFGRLADALLD 280
>gi|23015617|ref|ZP_00055388.1| COG0030: Dimethyladenosine transferase (rRNA methylation)
[Magnetospirillum magnetotacticum MS-1]
Length = 276
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 50/105 (47%), Gaps = 6/105 (5%)
Query: 12 RLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFKLIERVVSCIFR 71
RLS++ Q C V F + +AF P P V VV PR P+ F+ +ERV + F
Sbjct: 165 RLSVITQWLCEVRPLFNVDRRAFTPPPAVTSTVVDLIPRSQPLAPARFETLERVTAAAFG 224
Query: 72 YRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
R+K + S L P + LLER + P R ++ V+ F
Sbjct: 225 QRRKMLR---SSLKPLGGAE---ELLERTGILPTARAEEIPVEGF 263
>gi|383812812|ref|ZP_09968239.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Serratia sp. M24T3]
gi|383298222|gb|EIC86529.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Serratia sp. M24T3]
Length = 272
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 6/104 (5%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +CN+ +P ++F P P+VD VV TP +P+ D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCNIIPVLEVPPESFTPAPKVDSAVVRLTPHAEIPYPVSDI 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLF-PKRKRQLVVSLLERA 100
+++ R+ + F R+K + LF P++ +L + L RA
Sbjct: 208 --RILARLTTDAFNQRRKTIRNSLGHLFTPEQMTELGLDLSMRA 249
>gi|152968629|ref|YP_001333738.1| dimethyladenosine transferase [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238893024|ref|YP_002917758.1| dimethyladenosine transferase [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|262044916|ref|ZP_06017958.1| dimethyladenosine transferase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|330009280|ref|ZP_08306496.1| dimethyladenosine transferase [Klebsiella sp. MS 92-3]
gi|365142608|ref|ZP_09347724.1| ribosomal RNA small subunit methyltransferase A [Klebsiella sp.
4_1_44FAA]
gi|378976919|ref|YP_005225060.1| dimethyladenosine transferase [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|386033106|ref|YP_005953019.1| KsgA/Dim1 family 16S ribosomal RNA methyltransferase [Klebsiella
pneumoniae KCTC 2242]
gi|402782475|ref|YP_006638021.1| dimethyladenosine transferase [Klebsiella pneumoniae subsp.
pneumoniae 1084]
gi|419973513|ref|ZP_14488937.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Klebsiella pneumoniae subsp. pneumoniae KPNIH1]
gi|419980080|ref|ZP_14495367.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Klebsiella pneumoniae subsp. pneumoniae KPNIH2]
gi|419985048|ref|ZP_14500191.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Klebsiella pneumoniae subsp. pneumoniae KPNIH4]
gi|419990133|ref|ZP_14505106.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Klebsiella pneumoniae subsp. pneumoniae KPNIH5]
gi|419996013|ref|ZP_14510817.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Klebsiella pneumoniae subsp. pneumoniae KPNIH6]
gi|420003064|ref|ZP_14517712.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Klebsiella pneumoniae subsp. pneumoniae KPNIH7]
gi|420007887|ref|ZP_14522379.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Klebsiella pneumoniae subsp. pneumoniae KPNIH8]
gi|420013857|ref|ZP_14528166.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Klebsiella pneumoniae subsp. pneumoniae KPNIH9]
gi|420019168|ref|ZP_14533362.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Klebsiella pneumoniae subsp. pneumoniae KPNIH10]
gi|420024660|ref|ZP_14538672.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Klebsiella pneumoniae subsp. pneumoniae KPNIH11]
gi|420031653|ref|ZP_14545473.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Klebsiella pneumoniae subsp. pneumoniae KPNIH12]
gi|420037904|ref|ZP_14551555.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Klebsiella pneumoniae subsp. pneumoniae KPNIH14]
gi|420042211|ref|ZP_14555705.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Klebsiella pneumoniae subsp. pneumoniae KPNIH16]
gi|420048339|ref|ZP_14561653.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Klebsiella pneumoniae subsp. pneumoniae KPNIH17]
gi|420053619|ref|ZP_14566796.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Klebsiella pneumoniae subsp. pneumoniae KPNIH18]
gi|420059490|ref|ZP_14572497.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Klebsiella pneumoniae subsp. pneumoniae KPNIH19]
gi|420065158|ref|ZP_14577965.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Klebsiella pneumoniae subsp. pneumoniae KPNIH20]
gi|420071500|ref|ZP_14584145.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Klebsiella pneumoniae subsp. pneumoniae KPNIH21]
gi|420075959|ref|ZP_14588433.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Klebsiella pneumoniae subsp. pneumoniae KPNIH22]
gi|420084207|ref|ZP_14596472.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Klebsiella pneumoniae subsp. pneumoniae KPNIH23]
gi|421912415|ref|ZP_16342138.1| SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
gi|421917175|ref|ZP_16346738.1| SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
gi|424828907|ref|ZP_18253635.1| dimethyladenosine transferase [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|424935132|ref|ZP_18353504.1| Ribosomal RNA small subunit methyltransferase A [Klebsiella
pneumoniae subsp. pneumoniae KpQ3]
gi|425078430|ref|ZP_18481533.1| ribosomal RNA small subunit methyltransferase A [Klebsiella
pneumoniae subsp. pneumoniae WGLW1]
gi|425079813|ref|ZP_18482910.1| ribosomal RNA small subunit methyltransferase A [Klebsiella
pneumoniae subsp. pneumoniae WGLW2]
gi|425089062|ref|ZP_18492155.1| ribosomal RNA small subunit methyltransferase A [Klebsiella
pneumoniae subsp. pneumoniae WGLW3]
gi|425089931|ref|ZP_18493016.1| ribosomal RNA small subunit methyltransferase A [Klebsiella
pneumoniae subsp. pneumoniae WGLW5]
gi|428151607|ref|ZP_18999319.1| Dimethyladenosine transferase [Klebsiella pneumoniae subsp.
pneumoniae ST512-K30BO]
gi|428933651|ref|ZP_19007198.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Klebsiella pneumoniae JHCK1]
gi|428942196|ref|ZP_19015205.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Klebsiella pneumoniae VA360]
gi|166221672|sp|A6T4I7.1|RSMA_KLEP7 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|150953478|gb|ABR75508.1| dimethyladenosine transferase [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238545340|dbj|BAH61691.1| dimethyladenosine transferase [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|238774027|dbj|BAH66524.1| dimethyladenosine transferase [Klebsiella pneumoniae NTUH-K2044]
gi|238774059|dbj|BAH66555.1| dimethyladenosine transferase [Klebsiella pneumoniae]
gi|259037643|gb|EEW38872.1| dimethyladenosine transferase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|328534857|gb|EGF61399.1| dimethyladenosine transferase [Klebsiella sp. MS 92-3]
gi|339760234|gb|AEJ96454.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Klebsiella pneumoniae KCTC 2242]
gi|363651390|gb|EHL90458.1| ribosomal RNA small subunit methyltransferase A [Klebsiella sp.
4_1_44FAA]
gi|364516330|gb|AEW59458.1| dimethyladenosine transferase [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|397346996|gb|EJJ40106.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Klebsiella pneumoniae subsp. pneumoniae KPNIH2]
gi|397348152|gb|EJJ41254.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Klebsiella pneumoniae subsp. pneumoniae KPNIH1]
gi|397353032|gb|EJJ46109.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Klebsiella pneumoniae subsp. pneumoniae KPNIH4]
gi|397366134|gb|EJJ58753.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Klebsiella pneumoniae subsp. pneumoniae KPNIH6]
gi|397367748|gb|EJJ60357.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Klebsiella pneumoniae subsp. pneumoniae KPNIH5]
gi|397370371|gb|EJJ62954.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Klebsiella pneumoniae subsp. pneumoniae KPNIH7]
gi|397379179|gb|EJJ71377.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Klebsiella pneumoniae subsp. pneumoniae KPNIH9]
gi|397383973|gb|EJJ76100.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Klebsiella pneumoniae subsp. pneumoniae KPNIH8]
gi|397389334|gb|EJJ81276.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Klebsiella pneumoniae subsp. pneumoniae KPNIH10]
gi|397398597|gb|EJJ90259.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Klebsiella pneumoniae subsp. pneumoniae KPNIH11]
gi|397399800|gb|EJJ91450.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Klebsiella pneumoniae subsp. pneumoniae KPNIH12]
gi|397404861|gb|EJJ96347.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Klebsiella pneumoniae subsp. pneumoniae KPNIH14]
gi|397415527|gb|EJK06712.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Klebsiella pneumoniae subsp. pneumoniae KPNIH17]
gi|397416860|gb|EJK08030.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Klebsiella pneumoniae subsp. pneumoniae KPNIH16]
gi|397423847|gb|EJK14764.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Klebsiella pneumoniae subsp. pneumoniae KPNIH18]
gi|397432245|gb|EJK22909.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Klebsiella pneumoniae subsp. pneumoniae KPNIH20]
gi|397435488|gb|EJK26103.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Klebsiella pneumoniae subsp. pneumoniae KPNIH19]
gi|397440140|gb|EJK30554.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Klebsiella pneumoniae subsp. pneumoniae KPNIH21]
gi|397447921|gb|EJK38106.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Klebsiella pneumoniae subsp. pneumoniae KPNIH22]
gi|397450457|gb|EJK40562.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Klebsiella pneumoniae subsp. pneumoniae KPNIH23]
gi|402543331|gb|AFQ67480.1| Dimethyladenosine transferase [Klebsiella pneumoniae subsp.
pneumoniae 1084]
gi|405590291|gb|EKB63825.1| ribosomal RNA small subunit methyltransferase A [Klebsiella
pneumoniae subsp. pneumoniae WGLW1]
gi|405600200|gb|EKB73367.1| ribosomal RNA small subunit methyltransferase A [Klebsiella
pneumoniae subsp. pneumoniae WGLW3]
gi|405606738|gb|EKB79708.1| ribosomal RNA small subunit methyltransferase A [Klebsiella
pneumoniae subsp. pneumoniae WGLW2]
gi|405614495|gb|EKB87194.1| ribosomal RNA small subunit methyltransferase A [Klebsiella
pneumoniae subsp. pneumoniae WGLW5]
gi|407809319|gb|EKF80570.1| Ribosomal RNA small subunit methyltransferase A [Klebsiella
pneumoniae subsp. pneumoniae KpQ3]
gi|410113678|emb|CCM84763.1| SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
gi|410120518|emb|CCM89363.1| SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
gi|414706323|emb|CCN28027.1| dimethyladenosine transferase [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|426299124|gb|EKV61481.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Klebsiella pneumoniae VA360]
gi|426304787|gb|EKV66923.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Klebsiella pneumoniae JHCK1]
gi|427538431|emb|CCM95457.1| Dimethyladenosine transferase [Klebsiella pneumoniae subsp.
pneumoniae ST512-K30BO]
Length = 273
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 58/134 (43%), Gaps = 15/134 (11%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A + RLS+M Q +C V +P AF P P+VD VV P H + P K
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCQVIPVLEVPPSAFTPPPKVDSAVVRLVP--HSTMPYPVK 205
Query: 61 ---LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
++ R+ + F R+K + LF V +L + P +R +SV
Sbjct: 206 EIRVLSRITTEAFNQRRKTIRNSLGNLFS-------VEVLTELGIDPAMRAENISV---A 255
Query: 118 QICLAYRDMCEEMP 131
Q CL + + +P
Sbjct: 256 QYCLMANWLSDNLP 269
>gi|457094547|gb|EMG25066.1| Dimethyladenosine transferase [Streptococcus parauberis KRS-02083]
Length = 290
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 60/117 (51%), Gaps = 3/117 (2%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIFR 71
LSI Q + + F +P F+P P VD ++ T R P++ + + + RV F
Sbjct: 172 LSIAVQYYMDAKVAFIVPRTVFVPAPNVDSAILKMTRRDQPLVAVQDEDFLFRVSKASFV 231
Query: 72 YRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEFGQICLAYRDM 126
+R+K ++ + F K + + + LE + + P +R LS+++FG++ A R++
Sbjct: 232 HRRKTLWNNLTSHFGKTEEIKANLTKALEISEISPSIRGEALSIEQFGKLADALREV 288
>gi|292489394|ref|YP_003532281.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Erwinia amylovora CFBP1430]
gi|292898387|ref|YP_003537756.1| dimethyladenosine transferase [Erwinia amylovora ATCC 49946]
gi|428786358|ref|ZP_19003838.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Erwinia amylovora ACW56400]
gi|291198235|emb|CBJ45341.1| dimethyladenosine transferase [Erwinia amylovora ATCC 49946]
gi|291554828|emb|CBA22688.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Erwinia amylovora CFBP1430]
gi|312173559|emb|CBX81813.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Erwinia amylovora ATCC BAA-2158]
gi|426275204|gb|EKV52942.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Erwinia amylovora ACW56400]
Length = 275
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPR---VHPIIDL 57
++A G + RL++M Q +C V +P ++F P P+VD VV P +HP+ D+
Sbjct: 148 LVAGPGSKAYGRLTVMAQYYCQVIPVLEVPPESFTPAPKVDSAVVRLMPYAQPLHPVDDI 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+ + R+ + F R+K + LF +L + P LR ++V ++
Sbjct: 208 --RALSRITTEAFGKRRKTLRNSLGHLF-------TTDVLAEMNIDPTLRAENITVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QLA 261
>gi|392330032|ref|ZP_10274648.1| dimethyladenosine transferase [Streptococcus canis FSL Z3-227]
gi|391419904|gb|EIQ82715.1| dimethyladenosine transferase [Streptococcus canis FSL Z3-227]
Length = 290
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 3/117 (2%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ R P+I++ + RV F
Sbjct: 172 LSIAVQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRDQPLIEVKDEDFFFRVSRLSFV 231
Query: 72 YRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEFGQICLAYRDM 126
+R+K ++ + F K + + + L A +KP +R LS+Q+FG++ A +D+
Sbjct: 232 HRRKTLWNNLTSHFGKSEDSKAKLEKGLALANIKPSIRGEALSIQDFGKLADALKDV 288
>gi|348028148|ref|YP_004870834.1| dimethyladenosine transferase [Glaciecola nitratireducens FR1064]
gi|347945491|gb|AEP28841.1| dimethyladenosine transferase [Glaciecola nitratireducens FR1064]
Length = 293
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 53/119 (44%), Gaps = 8/119 (6%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDL-PFKL 61
A+ G + RLS+M Q +C +P AF P P+VD VV P P +
Sbjct: 148 ASHGDKLYGRLSVMAQYYCQAIPVVAVPPTAFKPAPKVDSAVVRLVPHATPPAQVDSIDR 207
Query: 62 IERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
+++VV+ F R+K + L + +E +KP LR LS+Q+F I
Sbjct: 208 LQQVVTTAFNQRRKTIRNSLKELMSHEE-------IESLGIKPELRAEALSLQDFALIA 259
>gi|456369696|gb|EMF48596.1| Dimethyladenosine transferase [Streptococcus parauberis KRS-02109]
Length = 290
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 60/117 (51%), Gaps = 3/117 (2%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIFR 71
LSI Q + + F +P F+P P VD ++ T R P++ + + + RV F
Sbjct: 172 LSIAVQYYMDAKVAFIVPRTVFVPAPNVDSAILKMTRRDQPLVAVQDEDFLFRVSKASFV 231
Query: 72 YRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEFGQICLAYRDM 126
+R+K ++ + F K + + + LE + + P +R LS+++FG++ A R++
Sbjct: 232 HRRKTLWNNLTSHFGKTEEIKANLTKALEISEISPSIRGEALSIEQFGKLADALREV 288
>gi|339998111|ref|YP_004728994.1| dimethyladenosine transferase [Salmonella bongori NCTC 12419]
gi|339511472|emb|CCC29175.1| dimethyladenosine transferase [Salmonella bongori NCTC 12419]
Length = 273
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 55/123 (44%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A + RLS+M Q +C V +P AF P P+VD VV P H I+ P K
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCQVIPVLEVPPTAFTPPPKVDSAVVRLVP--HTIMPYPVK 205
Query: 61 ---LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
++ R+ + F R+K + LF V L + P +R +SV ++
Sbjct: 206 DIRVLSRITTEAFNQRRKTIRNSLGNLFS-------VETLTEMGIDPAMRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QMA 261
>gi|190572863|ref|YP_001970708.1| dimethyladenosine transferase [Stenotrophomonas maltophilia K279a]
gi|190010785|emb|CAQ44394.1| putative dimethyladenosine transferase [Stenotrophomonas
maltophilia K279a]
Length = 267
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 54/123 (43%), Gaps = 10/123 (8%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLP-F 59
M A G + RLS+M Q +C V F +P AF P P+VD VV PR I +
Sbjct: 151 MAAGPGSKVYGRLSVMLQAYCQVTSLFVVPPGAFRPPPKVDSAVVRLVPRDPATISISDH 210
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
K VV F R+K + + + Q V A V+P R QL V EF I
Sbjct: 211 KRFAEVVKAAFGQRRKTLRNALNNVV--SAEQFVA-----AGVRPDARAEQLDVAEF--I 261
Query: 120 CLA 122
LA
Sbjct: 262 ALA 264
>gi|156124974|gb|ABU50801.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Acinetobacter venetianus RAG-1 = CIP 110063]
Length = 270
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 53/117 (45%), Gaps = 8/117 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPF 59
+ AT ++ RLS+M Q +C F +P +F P P+V V P PI+
Sbjct: 152 ITATPNTKEYGRLSVMIQYFCKPTFLFEVPPGSFNPPPKVTSAVFRLEPYETKPIVAKDE 211
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
K + R+V +F R+K + K L E+A V P+ RP LS+ +F
Sbjct: 212 KALARLVGHVFTQRRKTLRN-------SLKGMLAEDGFEKAGVDPMARPETLSLADF 261
>gi|260554070|ref|ZP_05826333.1| dimethyladenosine transferase [Acinetobacter sp. RUH2624]
gi|445429101|ref|ZP_21438191.1| dimethyladenosine transferase [Acinetobacter baumannii OIFC021]
gi|260404809|gb|EEW98316.1| dimethyladenosine transferase [Acinetobacter sp. RUH2624]
gi|444761543|gb|ELW85942.1| dimethyladenosine transferase [Acinetobacter baumannii OIFC021]
Length = 270
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 55/117 (47%), Gaps = 8/117 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPF 59
+ A ++ RLS+M Q +C F +P AF P P+V V P PI+
Sbjct: 152 ITAEPNTKEYGRLSVMIQYYCQPTFLFEVPAGAFNPPPKVTSAVFRLVPYEQKPIVAKDE 211
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
K + R+V+ +F R+K + SL K L E+A V P+ RP L++ EF
Sbjct: 212 KALARLVAHVFTQRRKTLRN--SL-----KGMLAEDGFEKAGVDPMARPETLTLAEF 261
>gi|86357087|ref|YP_468979.1| dimethyladenosine transferase [Rhizobium etli CFN 42]
gi|119365052|sp|Q2KA84.1|RSMA_RHIEC RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|86281189|gb|ABC90252.1| dimethyladenosine transferase (16S rRNA dimethylase) protein
[Rhizobium etli CFN 42]
Length = 275
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 11/126 (8%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A E + RL ++C + F +P +AF P P+V VVH PR +P +
Sbjct: 161 IVAGEDDDHYGRLGVLCGWRTDARMAFDVPPQAFTPPPKVTSTVVHLLPRENP-VQCAVA 219
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
+E+V F R+K + + L + SLL +A + P R LSV+EF C
Sbjct: 220 NLEKVTQAAFGQRRKMLRQSLKPLGGE-------SLLVKAGIDPARRAETLSVEEF---C 269
Query: 121 LAYRDM 126
L ++
Sbjct: 270 LLANNL 275
>gi|430003076|emb|CCF18859.1| Dimethyladenosine transferase (S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase) (16S rRNA
dimethylase) (High level kasugamycin resistance protein
ksgA) (Kasugamycin dimethyltransferase) [Rhizobium sp.]
Length = 275
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 55/118 (46%), Gaps = 12/118 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLP-- 58
++A E + RL ++ F +P +AF P P+V VVH TPR P LP
Sbjct: 161 IVARENDDHYGRLGVLAGWRTEARMVFDVPPQAFTPPPKVTSSVVHLTPRQAP---LPCD 217
Query: 59 FKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
K +E V F R+K + + L + +LL +A + P+ R LSV+EF
Sbjct: 218 VKKLETVTQAAFGQRRKMLRQSLKALGGE-------ALLSKAGIDPVRRAETLSVEEF 268
>gi|386717139|ref|YP_006183465.1| dimethyladenosine transferase [Stenotrophomonas maltophilia D457]
gi|384076701|emb|CCH11284.1| Dimethyladenosine transferase [Stenotrophomonas maltophilia D457]
Length = 267
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 56/125 (44%), Gaps = 14/125 (11%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDL-PF 59
M A G + RLS+M Q +C V F +P AF P P+VD VV PR I++
Sbjct: 151 MAAGPGSKVYGRLSVMLQAYCQVTSLFVVPPGAFRPPPKVDSAVVRLVPRDPAAININDH 210
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLE--RACVKPILRPYQLSVQEFG 117
K VV F R+K + + VVS + A V+P R QL V EF
Sbjct: 211 KRFAEVVKAAFGQRRKTL---------RNALNNVVSAEQFIAAGVRPDARAEQLDVAEF- 260
Query: 118 QICLA 122
I LA
Sbjct: 261 -IALA 264
>gi|125718907|ref|YP_001036040.1| dimethyladenosine transferase [Streptococcus sanguinis SK36]
gi|166221709|sp|A3CQN5.1|RSMA_STRSV RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|125498824|gb|ABN45490.1| Dimethyladenosine transferase, putative [Streptococcus sanguinis
SK36]
Length = 290
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 5/113 (4%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDL-PFKLIERVVSCIFR 71
LSI Q + F +P K F+P P VD ++ R P +++ K +V F
Sbjct: 172 LSIAVQYYMTAKVAFIVPRKVFVPAPNVDSAILKMVRRERPAVEVQDEKFFFKVSKASFV 231
Query: 72 YRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEFGQICLA 122
+R+K ++ + F K + + + + LERA + P +R LS++EF CLA
Sbjct: 232 HRRKTLWNNLTSYFGKSEETKGKLTAALERAELSPSVRGEALSLEEFA--CLA 282
>gi|226954480|ref|ZP_03824944.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Acinetobacter sp. ATCC 27244]
gi|294651496|ref|ZP_06728809.1| dimethyladenosine transferase [Acinetobacter haemolyticus ATCC
19194]
gi|226834829|gb|EEH67212.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Acinetobacter sp. ATCC 27244]
gi|292822646|gb|EFF81536.1| dimethyladenosine transferase [Acinetobacter haemolyticus ATCC
19194]
Length = 270
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 53/117 (45%), Gaps = 8/117 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPF 59
+ A ++ RLS+M Q +C F +P +F P P+V V P PI+
Sbjct: 152 ITAVPNTKEYGRLSVMIQYYCKPTFLFEVPPGSFNPPPKVTSAVFRLEPYETKPIVAKDE 211
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
K + R+VS +F R+K + K L E+A V P+ RP LS+ +F
Sbjct: 212 KALARLVSHVFTQRRKTLRN-------SLKGMLADDGFEKAGVDPMARPETLSLADF 261
>gi|37524611|ref|NP_927955.1| dimethyladenosine transferase [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|62900562|sp|Q7N8V7.1|RSMA_PHOLL RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|36784035|emb|CAE12904.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Photorhabdus luminescens subsp. laumondii TTO1]
Length = 272
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A G + RLS+M Q +C V +P AF P P+VD VV P HP+ ++
Sbjct: 148 LVAGPGSKTFGRLSVMAQYYCQVIPVLEVPPTAFTPAPKVDSAVVRLVPHKSIPHPVKNI 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+++ R+ + F R+K + LF V L + P R +SV+++
Sbjct: 208 --RMLSRITTQAFNQRRKTIRNSLGDLF-------TVEQLTELGIDPSTRAENISVEQY 257
>gi|357027152|ref|ZP_09089239.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Mesorhizobium amorphae CCNWGS0123]
gi|355540965|gb|EHH10154.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Mesorhizobium amorphae CCNWGS0123]
Length = 278
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 54/122 (44%), Gaps = 8/122 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A G + RL ++ F +P +AF P P+V VVH PR P + K
Sbjct: 164 IVAAPGSDAYGRLGVLAGWRTEARIAFDVPPQAFTPPPKVTSSVVHLVPRTSP-LPTDVK 222
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
+ R F R+K + + L + +LL RA + P R LSV+EF ++
Sbjct: 223 KLGRATEAAFGQRRKMLRQSVKSLGGE-------ALLTRAGIDPTRRAETLSVEEFVRLT 275
Query: 121 LA 122
A
Sbjct: 276 NA 277
>gi|242371677|ref|ZP_04817251.1| dimethyladenosine transferase [Staphylococcus epidermidis
M23864:W1]
gi|242350626|gb|EES42227.1| dimethyladenosine transferase [Staphylococcus epidermidis
M23864:W1]
Length = 296
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 11/124 (8%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLP---- 58
A+ G + LSI+ Q + T+P F+P P VD VV R P++D+
Sbjct: 165 ASVGTKAYGSLSIVAQYYTETSKVLTVPKSVFMPPPNVDSIVVKLMQREEPLVDIDDEEA 224
Query: 59 -FKLIERVVSCIFRYRQKQVYKPASLLFP--KRKRQLVVSLLERACVKPILRPYQLSVQE 115
FKL F R+K + F K+ + +++ LE A + P R L++Q+
Sbjct: 225 FFKL----AKAAFAQRRKTINNNYQNFFKDGKQYKSSILNWLENAGIDPKRRGETLTIQD 280
Query: 116 FGQI 119
F ++
Sbjct: 281 FAKL 284
>gi|161504790|ref|YP_001571902.1| dimethyladenosine transferase [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:- str. RSK2980]
gi|189028814|sp|A9MQG2.1|RSMA_SALAR RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|160866137|gb|ABX22760.1| hypothetical protein SARI_02914 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 273
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +C V +P AF P P+VD VV P +P+ D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCQVIPVLGVPPSAFTPPPKVDSAVVRLVPHATMPYPVKDI 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V L + P +R +SV ++
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VETLTEMGIDPAMRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QMA 261
>gi|375264359|ref|YP_005021802.1| KsgA/Dim1 family 16S ribosomal RNA methyltransferase [Vibrio sp.
EJY3]
gi|369839683|gb|AEX20827.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Vibrio sp. EJY3]
Length = 269
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 55/117 (47%), Gaps = 8/117 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPF 59
+ A G + RL++M Q +C V +P AF+P P+VD VV P V P
Sbjct: 147 LAAGPGSKAYGRLTVMAQYYCKVVPVLEVPPTAFVPPPKVDSAVVRLVPYEVLPCPAKDL 206
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+L++RV F R+K V K L +LE + P +RP L++++F
Sbjct: 207 RLLDRVCREGFNQRRKTVRN-------CYKSLLSTEVLEELGINPSMRPENLTLEQF 256
>gi|417331024|ref|ZP_12115410.1| Dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Alachua str. R6-377]
gi|353587055|gb|EHC46467.1| Dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Alachua str. R6-377]
Length = 249
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +C V +P AF P P+VD VV P +P+ D+
Sbjct: 124 LVAGPNSKAYGRLSVMAQYYCQVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPYPVKDI 183
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V L + P +R +SV ++
Sbjct: 184 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VETLTEMGIDPAMRAENISVAQYC 234
Query: 118 QIC 120
Q+
Sbjct: 235 QMA 237
>gi|259907385|ref|YP_002647741.1| dimethyladenosine transferase [Erwinia pyrifoliae Ep1/96]
gi|387870135|ref|YP_005801505.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Erwinia pyrifoliae DSM 12163]
gi|224963007|emb|CAX54490.1| Dimethyladenosine transferase [Erwinia pyrifoliae Ep1/96]
gi|283477218|emb|CAY73125.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Erwinia pyrifoliae DSM 12163]
Length = 275
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 57/123 (46%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A G + RL++M Q +C V +P ++F P P+VD VV P HP+ D+
Sbjct: 148 LVAGPGSKAYGRLTVMAQYYCQVIPVLEVPPESFTPAPKVDSAVVRLMPYAQPPHPVDDI 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+ + R+ + F R+K + LF +L + P LR ++V ++
Sbjct: 208 --RALSRITTEAFGKRRKTLRNSLGHLF-------TTDVLAEMNIDPTLRAENITVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QLA 261
>gi|343509050|ref|ZP_08746345.1| dimethyladenosine transferase [Vibrio scophthalmi LMG 19158]
gi|343515024|ref|ZP_08752088.1| dimethyladenosine transferase [Vibrio sp. N418]
gi|342799168|gb|EGU34748.1| dimethyladenosine transferase [Vibrio sp. N418]
gi|342805807|gb|EGU41054.1| dimethyladenosine transferase [Vibrio scophthalmi LMG 19158]
Length = 268
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 8/117 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPF 59
+ A G + RL++M Q +C V +P AF+P P+VD VV P V P
Sbjct: 147 LAAGPGSKAYGRLTVMAQYFCKVVPVLEVPPTAFVPPPKVDSAVVRLMPYEVLPHPTTSL 206
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
K +ERV F R+K + K + V LE + P LRP L++++F
Sbjct: 207 KWLERVCREGFNQRRKTIRN-------CYKGLIEVETLEELGINPALRPENLTLEQF 256
>gi|377577127|ref|ZP_09806110.1| ribosomal RNA small subunit methyltransferase A [Escherichia
hermannii NBRC 105704]
gi|377541655|dbj|GAB51275.1| ribosomal RNA small subunit methyltransferase A [Escherichia
hermannii NBRC 105704]
Length = 273
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +C V +P AF P P+VD VV P HP+ ++
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCQVIPVLEVPPTAFTPPPKVDSAVVRLVPYTTLPHPVKEI 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+L+ R+ + F R+K + +F + L + P LR +SV ++
Sbjct: 208 --RLLSRITTEAFNQRRKTIRNSLGNVFS-------IEALTSMGIDPALRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QLA 261
>gi|269468227|gb|EEZ79917.1| dimethyladenosine transferase, rRNA methylation [uncultured SUP05
cluster bacterium]
Length = 254
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 15/125 (12%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
M+A+ G + RLS+M Q + V+ F +P ++F P P+VD +V+ P +ID
Sbjct: 139 MVASNGNKTYGRLSVMIQAFFEVEMIFVVPPESFEPAPKVDSAIVYLKPLEKNLID-DIT 197
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLL--ERACVKPILRPYQLSVQEFGQ 118
+ E++V F R+K + R + SLL E+ + R LSV EF
Sbjct: 198 VFEKIVKASFAQRRKTL------------RNCLKSLLTQEQTSIDLSQRAEMLSVNEFIT 245
Query: 119 ICLAY 123
+ Y
Sbjct: 246 LTSDY 250
>gi|62178655|ref|YP_215072.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|375112962|ref|ZP_09758132.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
gi|75484893|sp|Q57TH0.1|RSMA_SALCH RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|62126288|gb|AAX63991.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase;
kasugamycin resistance [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|322713108|gb|EFZ04679.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
Length = 273
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +C V +P AF P P+VD VV P +P+ D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCQVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPYPVKDI 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V L + P +R +SV ++
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VETLTEMGIDPAMRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QMA 261
>gi|227522373|ref|ZP_03952422.1| dimethyladenosine transferase [Lactobacillus hilgardii ATCC 8290]
gi|227090431|gb|EEI25743.1| dimethyladenosine transferase [Lactobacillus hilgardii ATCC 8290]
Length = 301
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 67/129 (51%), Gaps = 7/129 (5%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF--- 59
A G + LS++ Q +VD F +P AFIP+P+VD +V +P++ + PF
Sbjct: 171 AKPGTKPYGSLSVIVQQQNDVDISFVVPKTAFIPQPKVDSAIVKLSPKMQ-VDKRPFDHK 229
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEFG 117
K + V C F +++K ++ +F K++ + + +L+ + RP QL V++F
Sbjct: 230 KFVGFVRGC-FMHQRKTLWNNLLGVFGKQESVKGQIKKVLDDLSINAANRPEQLLVEQFV 288
Query: 118 QICLAYRDM 126
+ A+ ++
Sbjct: 289 ALTNAFHEI 297
>gi|168234845|ref|ZP_02659903.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|194734867|ref|YP_002113107.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|416572515|ref|ZP_11767260.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 4441 H]
gi|417387949|ref|ZP_12152224.1| Dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Minnesota str. A4-603]
gi|226732623|sp|B4TWT6.1|RSMA_SALSV RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|194710369|gb|ACF89590.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197291958|gb|EDY31308.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|353627491|gb|EHC75790.1| Dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Minnesota str. A4-603]
gi|363573067|gb|EHL56954.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 4441 H]
Length = 273
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +C V +P AF P P+VD VV P +P+ D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCQVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPYPVKDI 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V L + P +R +SV ++
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VETLTEMGIDPAMRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QMA 261
>gi|452963372|gb|EME68444.1| dimethyladenosine transferase [Magnetospirillum sp. SO-1]
Length = 286
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 46/105 (43%), Gaps = 6/105 (5%)
Query: 12 RLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFKLIERVVSCIFR 71
RLS++ Q C V F + +AF P P V VV PR P+ F +ERV + F
Sbjct: 165 RLSVITQWRCEVRPLFNVDRRAFTPPPAVTSTVVELVPRPEPLAPAHFATLERVTAAAFG 224
Query: 72 YRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
R+K + L LLER + P R ++ V+ F
Sbjct: 225 QRRKMLRSSLKALGGAE------DLLERTGLAPTARAEEIPVEGF 263
>gi|16759085|ref|NP_454702.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29140635|ref|NP_803977.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56412361|ref|YP_149436.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|161612426|ref|YP_001586391.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|167550727|ref|ZP_02344484.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|167989953|ref|ZP_02571053.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|168230359|ref|ZP_02655417.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|168243503|ref|ZP_02668435.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|168262232|ref|ZP_02684205.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|168820928|ref|ZP_02832928.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|194450226|ref|YP_002044058.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194470287|ref|ZP_03076271.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|197249198|ref|YP_002145074.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197263010|ref|ZP_03163084.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197361298|ref|YP_002140933.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|198244097|ref|YP_002214042.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|200389272|ref|ZP_03215884.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|204926662|ref|ZP_03217864.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205351430|ref|YP_002225231.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207855603|ref|YP_002242254.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|213161029|ref|ZP_03346739.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
gi|213427533|ref|ZP_03360283.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
gi|213648900|ref|ZP_03378953.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
gi|224581932|ref|YP_002635730.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|238911148|ref|ZP_04654985.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|289826183|ref|ZP_06545295.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-3139]
gi|374982386|ref|ZP_09723707.1| Dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|374999821|ref|ZP_09724162.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Infantis str. SARB27]
gi|375117519|ref|ZP_09762686.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Dublin str. SD3246]
gi|375122203|ref|ZP_09767367.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Gallinarum str. SG9]
gi|378443544|ref|YP_005231176.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|378448383|ref|YP_005235742.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|378698071|ref|YP_005180028.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|378953894|ref|YP_005211381.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|378958232|ref|YP_005215718.1| ribosomal RNA small subunit methyltransferase A [Salmonella
enterica subsp. enterica serovar Typhi str. P-stx-12]
gi|378987495|ref|YP_005250659.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
gi|379699309|ref|YP_005241037.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. ST4/74]
gi|383494914|ref|YP_005395603.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 798]
gi|386589969|ref|YP_006086369.1| Dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Heidelberg str. B182]
gi|409248500|ref|YP_006884341.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|416422907|ref|ZP_11690485.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|416429546|ref|ZP_11694608.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|416439574|ref|ZP_11700293.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|416446831|ref|ZP_11705343.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|416455021|ref|ZP_11710646.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|416458149|ref|ZP_11712751.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|416469088|ref|ZP_11718301.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|416474023|ref|ZP_11719904.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|416494596|ref|ZP_11728223.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|416495622|ref|ZP_11728672.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|416508730|ref|ZP_11736177.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB31]
gi|416522750|ref|ZP_11740638.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. ATCC BAA710]
gi|416547288|ref|ZP_11754460.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|416564741|ref|ZP_11763465.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 42N]
gi|416577962|ref|ZP_11770182.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|416588052|ref|ZP_11776588.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|416592505|ref|ZP_11779315.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|416600420|ref|ZP_11784367.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|416608955|ref|ZP_11789687.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|416612810|ref|ZP_11791747.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|416620059|ref|ZP_11795440.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|416627948|ref|ZP_11799268.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|416644853|ref|ZP_11807067.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|416652388|ref|ZP_11811709.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Montevideo
str. 507440-20]
gi|416657637|ref|ZP_11813853.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|416667739|ref|ZP_11818468.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|416675535|ref|ZP_11821600.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|416694642|ref|ZP_11827238.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|416708197|ref|ZP_11833059.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|416710382|ref|ZP_11834487.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|416717476|ref|ZP_11839728.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|416726506|ref|ZP_11846567.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|416729307|ref|ZP_11847911.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2009159199]
gi|416739373|ref|ZP_11853776.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008282]
gi|416748108|ref|ZP_11858510.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008283]
gi|416756938|ref|ZP_11862829.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|416763523|ref|ZP_11867197.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008285]
gi|416767693|ref|ZP_11870069.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008287]
gi|417323760|ref|ZP_12110219.1| Dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Adelaide str. A4-669]
gi|417338907|ref|ZP_12120593.1| Dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Baildon str. R6-199]
gi|417362719|ref|ZP_12136290.1| Dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Hvittingfoss str. A4-620]
gi|417370674|ref|ZP_12141472.1| Dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Inverness str. R8-3668]
gi|417378414|ref|ZP_12147073.1| Dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Johannesburg str. S5-703]
gi|417400200|ref|ZP_12157392.1| Dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Mississippi str. A4-633]
gi|417472221|ref|ZP_12167993.1| Dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Rubislaw str. A4-653]
gi|417499885|ref|ZP_12173662.1| Dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Senftenberg str. A4-543]
gi|417523728|ref|ZP_12184088.1| Dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Urbana str. R8-2977]
gi|418483813|ref|ZP_13052818.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 80959-06]
gi|418487026|ref|ZP_13055872.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Montevideo
str. CT_02035278]
gi|418495000|ref|ZP_13061445.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Montevideo
str. CT_02035318]
gi|418501321|ref|ZP_13067710.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Montevideo
str. CT_02035320]
gi|418504041|ref|ZP_13070400.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Montevideo
str. CT_02035321]
gi|418508699|ref|ZP_13075002.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Montevideo
str. CT_02035327]
gi|418513481|ref|ZP_13079711.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Pomona str.
ATCC 10729]
gi|418524137|ref|ZP_13090124.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008286]
gi|418762558|ref|ZP_13318685.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35185]
gi|418768460|ref|ZP_13324508.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35199]
gi|418770466|ref|ZP_13326487.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21539]
gi|418777722|ref|ZP_13333649.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 33953]
gi|418779301|ref|ZP_13335204.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35188]
gi|418786714|ref|ZP_13342527.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21559]
gi|418787589|ref|ZP_13343390.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19447]
gi|418792696|ref|ZP_13348436.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19449]
gi|418796502|ref|ZP_13352194.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19567]
gi|418800948|ref|ZP_13356592.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35202]
gi|418830644|ref|ZP_13385605.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM N18486]
gi|418842774|ref|ZP_13397583.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21554]
gi|418843691|ref|ZP_13398487.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19443]
gi|418849349|ref|ZP_13404082.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 37978]
gi|418855251|ref|ZP_13409909.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19593]
gi|418857212|ref|ZP_13411841.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19470]
gi|418864679|ref|ZP_13419204.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19536]
gi|418869911|ref|ZP_13424342.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 4176]
gi|419731539|ref|ZP_14258449.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Heidelberg
str. 41579]
gi|419736156|ref|ZP_14263018.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Heidelberg
str. 41563]
gi|419738055|ref|ZP_14264822.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Heidelberg
str. 41573]
gi|419744808|ref|ZP_14271458.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Heidelberg
str. 41566]
gi|419748753|ref|ZP_14275244.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Heidelberg
str. 41565]
gi|419791597|ref|ZP_14317249.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Newport
str. Levine 15]
gi|421356581|ref|ZP_15806901.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 622731-39]
gi|421363016|ref|ZP_15813259.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 639016-6]
gi|421366078|ref|ZP_15816283.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 640631]
gi|421370997|ref|ZP_15821157.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 77-0424]
gi|421374893|ref|ZP_15825014.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 607307-6]
gi|421379801|ref|ZP_15829866.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 485549-17]
gi|421386355|ref|ZP_15836369.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 596866-22]
gi|421388752|ref|ZP_15838738.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 596866-70]
gi|421394524|ref|ZP_15844464.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 629164-26]
gi|421399119|ref|ZP_15849015.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 629164-37]
gi|421403608|ref|ZP_15853453.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 639672-46]
gi|421406844|ref|ZP_15856656.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 639672-50]
gi|421413890|ref|ZP_15863640.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 77-1427]
gi|421417109|ref|ZP_15866820.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 77-2659]
gi|421423060|ref|ZP_15872724.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 78-1757]
gi|421426075|ref|ZP_15875704.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 22510-1]
gi|421431527|ref|ZP_15881109.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 8b-1]
gi|421433717|ref|ZP_15883275.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 648905 5-18]
gi|421439852|ref|ZP_15889333.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 648901 6-18]
gi|421446145|ref|ZP_15895565.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 50-3079]
gi|421449004|ref|ZP_15898389.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 58-6482]
gi|421568760|ref|ZP_16014473.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Heidelberg
str. CFSAN00322]
gi|421575844|ref|ZP_16021453.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Heidelberg
str. CFSAN00325]
gi|421580936|ref|ZP_16026488.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Heidelberg
str. CFSAN00326]
gi|421583782|ref|ZP_16029298.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Heidelberg
str. CFSAN00328]
gi|421885052|ref|ZP_16316255.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
gi|422024206|ref|ZP_16370700.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm1]
gi|422029220|ref|ZP_16375494.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm2]
gi|427544490|ref|ZP_18926000.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm8]
gi|427560212|ref|ZP_18930762.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm9]
gi|427579489|ref|ZP_18935551.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm3]
gi|427601126|ref|ZP_18940365.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm4]
gi|427625619|ref|ZP_18945271.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm6]
gi|427648884|ref|ZP_18950031.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm10]
gi|427659418|ref|ZP_18954982.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm11]
gi|427664532|ref|ZP_18959729.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm12]
gi|427687771|ref|ZP_18964580.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm5]
gi|436635529|ref|ZP_20515789.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 22704]
gi|436791788|ref|ZP_20521547.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. SE30663]
gi|436800400|ref|ZP_20524434.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CHS44]
gi|436806589|ref|ZP_20526744.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1882]
gi|436812786|ref|ZP_20531118.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1884]
gi|436830951|ref|ZP_20535661.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1594]
gi|436852241|ref|ZP_20542562.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1566]
gi|436855533|ref|ZP_20544691.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1580]
gi|436866032|ref|ZP_20551808.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1543]
gi|436870703|ref|ZP_20554338.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1441]
gi|436876986|ref|ZP_20558153.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1810]
gi|436887484|ref|ZP_20563821.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1558]
gi|436895153|ref|ZP_20568216.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1018]
gi|436902108|ref|ZP_20572937.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1010]
gi|436908996|ref|ZP_20575884.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1729]
gi|436919993|ref|ZP_20582752.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_0895]
gi|436924238|ref|ZP_20585386.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_0899]
gi|436933609|ref|ZP_20589816.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1457]
gi|436940322|ref|ZP_20594330.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1747]
gi|436952764|ref|ZP_20601336.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_0968]
gi|436958713|ref|ZP_20603248.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1444]
gi|436972166|ref|ZP_20610168.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1445]
gi|436978532|ref|ZP_20612535.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1559]
gi|436993083|ref|ZP_20618070.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1565]
gi|437003496|ref|ZP_20621676.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1808]
gi|437021464|ref|ZP_20627925.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1811]
gi|437036847|ref|ZP_20634126.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_0956]
gi|437040121|ref|ZP_20634566.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1455]
gi|437048692|ref|ZP_20639706.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1575]
gi|437060142|ref|ZP_20646305.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1725]
gi|437064349|ref|ZP_20648370.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1745]
gi|437072969|ref|ZP_20652779.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1791]
gi|437080900|ref|ZP_20657440.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1795]
gi|437093589|ref|ZP_20663906.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 576709]
gi|437109042|ref|ZP_20667583.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 635290-58]
gi|437120820|ref|ZP_20671594.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 607308-16]
gi|437130495|ref|ZP_20676664.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 607308-19]
gi|437138566|ref|ZP_20681090.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 607307-2]
gi|437142965|ref|ZP_20683977.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 607308-9]
gi|437152820|ref|ZP_20690072.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 629163]
gi|437159396|ref|ZP_20693888.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. SE15-1]
gi|437171093|ref|ZP_20700388.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CVM_N202]
gi|437174964|ref|ZP_20702465.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CVM_56-3991]
gi|437182090|ref|ZP_20706822.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CVM_76-3618]
gi|437237172|ref|ZP_20713977.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 13183-1]
gi|437260678|ref|ZP_20717799.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CVM_81-2490]
gi|437269673|ref|ZP_20722894.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. SL909]
gi|437281077|ref|ZP_20728358.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. SL913]
gi|437286965|ref|ZP_20730467.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CVM_69-4941]
gi|437316975|ref|ZP_20737913.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 638970-15]
gi|437331614|ref|ZP_20741989.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 17927]
gi|437341109|ref|ZP_20744551.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CHS4]
gi|437397600|ref|ZP_20751510.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 22558]
gi|437422697|ref|ZP_20755189.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 543463 22-17]
gi|437451874|ref|ZP_20759561.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 543463 40-18]
gi|437459263|ref|ZP_20761115.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 561362 1-1]
gi|437474170|ref|ZP_20766189.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 642044 4-1]
gi|437490015|ref|ZP_20770795.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 642046 4-7]
gi|437518918|ref|ZP_20778589.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 648898 4-5]
gi|437539988|ref|ZP_20782247.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 648899 3-17]
gi|437553957|ref|ZP_20784174.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 648900 1-16]
gi|437576386|ref|ZP_20790555.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 648901 1-17]
gi|437596889|ref|ZP_20796504.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 648901 39-2]
gi|437604151|ref|ZP_20798781.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 648902 6-8]
gi|437615906|ref|ZP_20802484.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 648903 1-6]
gi|437642074|ref|ZP_20808030.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 648904 3-6]
gi|437661706|ref|ZP_20813144.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 653049 13-19]
gi|437674201|ref|ZP_20816354.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 642044 8-1]
gi|437689257|ref|ZP_20820067.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 561362 9-7]
gi|437717228|ref|ZP_20828215.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 543463 42-20]
gi|437732678|ref|ZP_20831686.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 648901 16-16]
gi|437789275|ref|ZP_20837105.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 76-2651]
gi|437808900|ref|ZP_20840460.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 33944]
gi|437816168|ref|ZP_20842528.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. SARB17]
gi|437850249|ref|ZP_20847321.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 6.0562-1]
gi|438029584|ref|ZP_20855259.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 50-5646]
gi|438085781|ref|ZP_20858889.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 81-2625]
gi|438099011|ref|ZP_20863133.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 62-1976]
gi|438108120|ref|ZP_20866875.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 53-407]
gi|438126252|ref|ZP_20872825.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Pullorum
str. ATCC 9120]
gi|440764585|ref|ZP_20943611.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Agona str.
SH11G1113]
gi|440766362|ref|ZP_20945357.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Agona str.
SH08SF124]
gi|440773260|ref|ZP_20952159.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Agona str.
SH10GFN094]
gi|445129215|ref|ZP_21380682.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Gallinarum
str. 9184]
gi|445147872|ref|ZP_21388475.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Dublin str.
SL1438]
gi|445155803|ref|ZP_21392523.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Dublin str.
HWS51]
gi|445169078|ref|ZP_21395095.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. SE8a]
gi|445191275|ref|ZP_21399783.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 20037]
gi|445225830|ref|ZP_21403620.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. SE10]
gi|445246169|ref|ZP_21408268.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 436]
gi|445328193|ref|ZP_21412857.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 18569]
gi|445352818|ref|ZP_21420825.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 13-1]
gi|445358267|ref|ZP_21422531.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. PT23]
gi|452121609|ref|YP_007471857.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Javiana
str. CFSAN001992]
gi|27151585|sp|Q8Z9J7.1|RSMA_SALTI RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|62900478|sp|Q5PDD9.1|RSMA_SALPA RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|189028815|sp|A9MYM4.1|RSMA_SALPB RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226732616|sp|B5F771.1|RSMA_SALA4 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226732617|sp|B5FI34.1|RSMA_SALDC RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226732618|sp|B5R1S8.1|RSMA_SALEP RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226732619|sp|B5RGC2.1|RSMA_SALG2 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226732620|sp|B4TJ47.1|RSMA_SALHS RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226732622|sp|B5BL27.1|RSMA_SALPK RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|254807882|sp|C0Q5E7.1|RSMA_SALPC RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|25286076|pir||AF0513 dimethyladenosine transferase [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16501375|emb|CAD01246.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29136259|gb|AAO67826.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56126618|gb|AAV76124.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|161361790|gb|ABX65558.1| hypothetical protein SPAB_00115 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194408530|gb|ACF68749.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194456651|gb|EDX45490.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|197092773|emb|CAR58198.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|197212901|gb|ACH50298.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197241265|gb|EDY23885.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197938613|gb|ACH75946.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|199606370|gb|EDZ04915.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|204323327|gb|EDZ08522.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205271211|emb|CAR35999.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205324333|gb|EDZ12172.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205331535|gb|EDZ18299.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205335041|gb|EDZ21805.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|205337400|gb|EDZ24164.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|205342515|gb|EDZ29279.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|205348868|gb|EDZ35499.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|206707406|emb|CAR31679.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|224466459|gb|ACN44289.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|261245323|emb|CBG23111.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267991761|gb|ACY86646.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301156719|emb|CBW16193.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|320084328|emb|CBY94121.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|321222340|gb|EFX47412.1| Dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|322615911|gb|EFY12828.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322620696|gb|EFY17556.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322623953|gb|EFY20790.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322627401|gb|EFY24192.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322630708|gb|EFY27472.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322638072|gb|EFY34773.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322640558|gb|EFY37209.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322647698|gb|EFY44183.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322648048|gb|EFY44515.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322656920|gb|EFY53206.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322657369|gb|EFY53641.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322663689|gb|EFY59889.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322666522|gb|EFY62700.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322672319|gb|EFY68431.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322676369|gb|EFY72440.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322679538|gb|EFY75583.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322686133|gb|EFY82117.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|323128408|gb|ADX15838.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. ST4/74]
gi|323194977|gb|EFZ80163.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323200114|gb|EFZ85201.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323201065|gb|EFZ86134.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323212286|gb|EFZ97110.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323216591|gb|EGA01317.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323222470|gb|EGA06840.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323225781|gb|EGA10001.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323228678|gb|EGA12807.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323236708|gb|EGA20784.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323239791|gb|EGA23838.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323242161|gb|EGA26190.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323249414|gb|EGA33330.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2009159199]
gi|323252251|gb|EGA36102.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008282]
gi|323256658|gb|EGA40388.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008283]
gi|323261308|gb|EGA44895.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323265512|gb|EGA49008.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008285]
gi|323271700|gb|EGA55118.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008287]
gi|326621786|gb|EGE28131.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Dublin str. SD3246]
gi|326626453|gb|EGE32796.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Gallinarum str. SG9]
gi|332987042|gb|AEF06025.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
gi|353078039|gb|EHB43798.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Infantis str. SARB27]
gi|353580955|gb|EHC42040.1| Dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Adelaide str. A4-669]
gi|353601698|gb|EHC57271.1| Dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Hvittingfoss str. A4-620]
gi|353610241|gb|EHC63279.1| Dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Inverness str. R8-3668]
gi|353620524|gb|EHC70607.1| Dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Johannesburg str. S5-703]
gi|353629839|gb|EHC77559.1| Dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Mississippi str. A4-633]
gi|353653496|gb|EHC95019.1| Dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Senftenberg str. A4-543]
gi|353654962|gb|EHC96107.1| Dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Rubislaw str. A4-653]
gi|353670887|gb|EHD07346.1| Dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Urbana str. R8-2977]
gi|357204505|gb|AET52551.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|357961026|gb|EHJ84645.1| Dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Baildon str. R6-199]
gi|363551188|gb|EHL35507.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. ATCC BAA710]
gi|363552020|gb|EHL36327.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB31]
gi|363570088|gb|EHL54026.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 42N]
gi|366060041|gb|EHN24306.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Montevideo
str. CT_02035318]
gi|366060337|gb|EHN24600.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 80959-06]
gi|366066835|gb|EHN30993.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Montevideo
str. CT_02035320]
gi|366071470|gb|EHN35569.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Montevideo
str. CT_02035278]
gi|366072369|gb|EHN36461.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Montevideo
str. CT_02035321]
gi|366079954|gb|EHN43936.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Montevideo
str. CT_02035327]
gi|366081842|gb|EHN45782.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Pomona str.
ATCC 10729]
gi|366826992|gb|EHN53902.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Montevideo
str. 507440-20]
gi|372207799|gb|EHP21296.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008286]
gi|374352104|gb|AEZ43865.1| Ribosomal RNA small subunit methyltransferase A [Salmonella
enterica subsp. enterica serovar Typhi str. P-stx-12]
gi|379985431|emb|CCF88528.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
gi|380461735|gb|AFD57138.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 798]
gi|381291097|gb|EIC32347.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Heidelberg
str. 41579]
gi|381292902|gb|EIC34076.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Heidelberg
str. 41563]
gi|381303537|gb|EIC44564.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Heidelberg
str. 41573]
gi|381307447|gb|EIC48302.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Heidelberg
str. 41566]
gi|381313131|gb|EIC53921.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Heidelberg
str. 41565]
gi|383797013|gb|AFH44095.1| Dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Heidelberg str. B182]
gi|392620460|gb|EIX02829.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Newport
str. Levine 15]
gi|392731191|gb|EIZ88420.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35199]
gi|392736035|gb|EIZ93202.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35185]
gi|392737060|gb|EIZ94221.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21539]
gi|392743650|gb|EJA00720.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 33953]
gi|392747544|gb|EJA04542.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21559]
gi|392753457|gb|EJA10387.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35188]
gi|392765846|gb|EJA22630.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19447]
gi|392766649|gb|EJA23422.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19449]
gi|392771371|gb|EJA28092.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19567]
gi|392782539|gb|EJA39173.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35202]
gi|392801334|gb|EJA57562.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM N18486]
gi|392806487|gb|EJA62585.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21554]
gi|392816447|gb|EJA72375.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19443]
gi|392821833|gb|EJA77656.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 37978]
gi|392821931|gb|EJA77751.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19593]
gi|392830131|gb|EJA85788.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19536]
gi|392833762|gb|EJA89373.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 4176]
gi|392835159|gb|EJA90757.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19470]
gi|395988264|gb|EJH97421.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 639016-6]
gi|395990906|gb|EJI00032.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 640631]
gi|395993500|gb|EJI02594.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 622731-39]
gi|396004768|gb|EJI13749.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 77-0424]
gi|396005618|gb|EJI14595.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 485549-17]
gi|396007150|gb|EJI16109.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 607307-6]
gi|396013261|gb|EJI22149.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 596866-22]
gi|396014974|gb|EJI23858.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 629164-26]
gi|396019158|gb|EJI28016.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 596866-70]
gi|396028395|gb|EJI37156.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 639672-46]
gi|396028465|gb|EJI37225.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 629164-37]
gi|396033013|gb|EJI41729.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 639672-50]
gi|396038319|gb|EJI46959.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 77-1427]
gi|396038736|gb|EJI47371.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 78-1757]
gi|396042994|gb|EJI51608.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 77-2659]
gi|396052386|gb|EJI60893.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 8b-1]
gi|396055171|gb|EJI63662.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 22510-1]
gi|396061644|gb|EJI70066.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 648905 5-18]
gi|396063563|gb|EJI71954.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 50-3079]
gi|396069098|gb|EJI77442.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 648901 6-18]
gi|396071235|gb|EJI79561.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 58-6482]
gi|397781966|gb|AFO66355.1| S-adenosylmethionine-6-N'N'-adenosyl [Salmonella enterica subsp.
salamae serovar Sofia]
gi|397782054|gb|AFO66426.1| dimethyladenosine transferase [Salmonella enterica subsp. salamae
serovar Sofia]
gi|402518607|gb|EJW25981.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Heidelberg
str. CFSAN00326]
gi|402521023|gb|EJW28362.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Heidelberg
str. CFSAN00325]
gi|402529478|gb|EJW36712.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Heidelberg
str. CFSAN00322]
gi|402531683|gb|EJW38888.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Heidelberg
str. CFSAN00328]
gi|414024342|gb|EKT07723.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm1]
gi|414024627|gb|EKT07994.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm8]
gi|414026571|gb|EKT09837.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm2]
gi|414038745|gb|EKT21448.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm9]
gi|414039240|gb|EKT21918.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm3]
gi|414043695|gb|EKT26181.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm4]
gi|414052915|gb|EKT34938.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm10]
gi|414054363|gb|EKT36313.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm6]
gi|414058416|gb|EKT40083.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm11]
gi|414062345|gb|EKT43667.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm12]
gi|414067912|gb|EKT48158.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm5]
gi|434942462|gb|ELL48750.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Pullorum
str. ATCC 9120]
gi|434956349|gb|ELL50084.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. SE30663]
gi|434958722|gb|ELL52253.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 22704]
gi|434958928|gb|ELL52441.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CHS44]
gi|434969114|gb|ELL61828.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1882]
gi|434975776|gb|ELL68050.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1884]
gi|434982581|gb|ELL74391.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1594]
gi|434984922|gb|ELL76622.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1566]
gi|434992287|gb|ELL83744.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1580]
gi|434994353|gb|ELL85703.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1543]
gi|435001477|gb|ELL92569.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1441]
gi|435009024|gb|ELL99820.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1810]
gi|435010545|gb|ELM01310.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1558]
gi|435017269|gb|ELM07776.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1018]
gi|435019895|gb|ELM10323.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1010]
gi|435028691|gb|ELM18764.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_0895]
gi|435029836|gb|ELM19885.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1729]
gi|435041117|gb|ELM30869.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_0899]
gi|435042393|gb|ELM32113.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1457]
gi|435046296|gb|ELM35913.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1747]
gi|435049469|gb|ELM38996.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_0968]
gi|435055549|gb|ELM44960.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1444]
gi|435055748|gb|ELM45158.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1445]
gi|435066127|gb|ELM55217.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1565]
gi|435069438|gb|ELM58438.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1559]
gi|435073153|gb|ELM62042.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1808]
gi|435073518|gb|ELM62391.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_0956]
gi|435078409|gb|ELM67141.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1811]
gi|435087747|gb|ELM76234.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1455]
gi|435092039|gb|ELM80412.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1725]
gi|435098545|gb|ELM86786.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1575]
gi|435100834|gb|ELM88989.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1745]
gi|435109023|gb|ELM96978.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1791]
gi|435111324|gb|ELM99228.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 576709]
gi|435112230|gb|ELN00107.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1795]
gi|435119237|gb|ELN06858.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 635290-58]
gi|435125650|gb|ELN13091.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 607308-19]
gi|435126504|gb|ELN13899.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 607308-16]
gi|435133018|gb|ELN20201.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 607307-2]
gi|435141484|gb|ELN28425.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 607308-9]
gi|435141842|gb|ELN28772.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 629163]
gi|435146737|gb|ELN33519.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CVM_N202]
gi|435149461|gb|ELN36156.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. SE15-1]
gi|435157204|gb|ELN43665.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CVM_56-3991]
gi|435164082|gb|ELN50195.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CVM_81-2490]
gi|435165405|gb|ELN51456.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CVM_76-3618]
gi|435169726|gb|ELN55496.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. SL913]
gi|435171938|gb|ELN57493.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. SL909]
gi|435179431|gb|ELN64579.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 638970-15]
gi|435184264|gb|ELN69209.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CVM_69-4941]
gi|435187294|gb|ELN72070.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 13183-1]
gi|435188809|gb|ELN73484.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 17927]
gi|435193995|gb|ELN78455.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CHS4]
gi|435198340|gb|ELN82545.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 22558]
gi|435200319|gb|ELN84320.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 543463 22-17]
gi|435208715|gb|ELN92121.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 543463 40-18]
gi|435222512|gb|ELO04620.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 561362 1-1]
gi|435224657|gb|ELO06618.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 642044 4-1]
gi|435227622|gb|ELO09099.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 648898 4-5]
gi|435230849|gb|ELO12114.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 642046 4-7]
gi|435237740|gb|ELO18405.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 648899 3-17]
gi|435243734|gb|ELO23990.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 648901 1-17]
gi|435244138|gb|ELO24369.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 648900 1-16]
gi|435249452|gb|ELO29277.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 648901 39-2]
gi|435257649|gb|ELO36929.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 648902 6-8]
gi|435262282|gb|ELO41411.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 648903 1-6]
gi|435268191|gb|ELO46804.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 653049 13-19]
gi|435275800|gb|ELO53850.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 648904 3-6]
gi|435278585|gb|ELO56415.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 642044 8-1]
gi|435282349|gb|ELO59971.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 561362 9-7]
gi|435284246|gb|ELO61742.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 543463 42-20]
gi|435287777|gb|ELO64885.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 648901 16-16]
gi|435295292|gb|ELO71804.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 76-2651]
gi|435299685|gb|ELO75810.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 33944]
gi|435308758|gb|ELO83676.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. SARB17]
gi|435318985|gb|ELO91873.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 81-2625]
gi|435326166|gb|ELO98000.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 62-1976]
gi|435328063|gb|ELO99679.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 50-5646]
gi|435333239|gb|ELP04066.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 53-407]
gi|435338323|gb|ELP07644.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 6.0562-1]
gi|436415933|gb|ELP13846.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Agona str.
SH11G1113]
gi|436416716|gb|ELP14619.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Agona str.
SH10GFN094]
gi|436423188|gb|ELP21006.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Agona str.
SH08SF124]
gi|444844129|gb|ELX69375.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Dublin str.
SL1438]
gi|444848671|gb|ELX73794.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Dublin str.
HWS51]
gi|444853731|gb|ELX78798.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Gallinarum
str. 9184]
gi|444863908|gb|ELX88722.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. SE8a]
gi|444868014|gb|ELX92680.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. SE10]
gi|444868122|gb|ELX92778.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 20037]
gi|444873627|gb|ELX97920.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 13-1]
gi|444880322|gb|ELY04401.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 18569]
gi|444886180|gb|ELY09945.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. PT23]
gi|444890334|gb|ELY13678.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 436]
gi|451910613|gb|AGF82419.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Javiana
str. CFSAN001992]
Length = 273
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +C V +P AF P P+VD VV P +P+ D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCQVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPYPVKDI 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V L + P +R +SV ++
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VETLTEMGIDPAMRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QMA 261
>gi|418577126|ref|ZP_13141253.1| dimethyladenosine transferase [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
gi|379324406|gb|EHY91557.1| dimethyladenosine transferase [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
Length = 296
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 58/133 (43%), Gaps = 11/133 (8%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLP---- 58
A G + LSI+ Q + T+P F+P P VD VV R PI+D+
Sbjct: 165 AQVGTKAYGSLSIVAQYYTETSKVLTVPKSVFLPPPNVDSIVVKLMKRPTPIVDIDDENK 224
Query: 59 -FKLIERVVSCIFRYRQKQVYKPASLLF--PKRKRQLVVSLLERACVKPILRPYQLSVQE 115
FK+ + F R+K + LF K ++ ++ LE A + P R LS++E
Sbjct: 225 FFKMTK----AAFSQRRKTINNNYQSLFVNGKVNKEKILEWLEAAGIDPRRRGETLSIKE 280
Query: 116 FGQICLAYRDMCE 128
F + ++ E
Sbjct: 281 FANLYNELQNFTE 293
>gi|417346142|ref|ZP_12126083.1| Dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Gaminara str. A4-567]
gi|353580589|gb|EHC41781.1| Dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Gaminara str. A4-567]
Length = 273
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +C V +P AF P P+VD VV P +P+ D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCQVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPYPVKDI 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V L + P +R +SV ++
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VETLTEMGIDPAMRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QMA 261
>gi|401682485|ref|ZP_10814376.1| dimethyladenosine transferase [Streptococcus sp. AS14]
gi|400184136|gb|EJO18381.1| dimethyladenosine transferase [Streptococcus sp. AS14]
Length = 290
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 3/115 (2%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDL-PFKLIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ R P + + K +V F
Sbjct: 172 LSIAVQYYMTAKVAFVVPRTVFVPAPNVDSAILKMVRRTQPAVAVQDEKFFFKVSKASFV 231
Query: 72 YRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEFGQICLAYR 124
+R+K ++ + F K + + + + LERA + P +R LS++EF ++ A +
Sbjct: 232 HRRKTLWNNLTSYFGKSEETKDKLTAALERADLSPSVRGEALSLEEFARLADALK 286
>gi|365903726|ref|ZP_09441549.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Lactobacillus malefermentans KCTC 3548]
Length = 296
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 60/129 (46%), Gaps = 5/129 (3%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF- 59
++A G + LSI Q F +P AFIP+P VD +V T R P+ +LP+
Sbjct: 165 LVAVPGTKAYGELSIAVQYRSQAKISFLVPRTAFIPQPNVDSAIVTLTKR-EPLAELPYD 223
Query: 60 -KLIERVVSCIFRYRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEF 116
K R V F +R+K + +F K+ R+ + +L+ + +R L + +F
Sbjct: 224 EKAFFRFVKGSFMHRRKSYWNNLQGMFGKQPEVRERIQRVLDDVKIDKGIRAETLPMSDF 283
Query: 117 GQICLAYRD 125
+ A+ D
Sbjct: 284 IMLTNAFHD 292
>gi|73663572|ref|YP_302353.1| dimethyladenosine transferase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|119365849|sp|Q49V02.1|RSMA_STAS1 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|72496087|dbj|BAE19408.1| dimethyladenosine transferase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 296
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 58/133 (43%), Gaps = 11/133 (8%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLP---- 58
A G + LSI+ Q + T+P F+P P VD VV R PI+D+
Sbjct: 165 AQVGTKAYGSLSIVAQYYTETSKVLTVPKSVFLPPPNVDSIVVKLMKRPTPIVDIDDENK 224
Query: 59 -FKLIERVVSCIFRYRQKQVYKPASLLF--PKRKRQLVVSLLERACVKPILRPYQLSVQE 115
FK+ + F R+K + LF K ++ ++ LE A + P R LS++E
Sbjct: 225 FFKMTK----AAFSQRRKTINNNYQSLFVNGKVNKEKILEWLEAAGIDPRRRGETLSIKE 280
Query: 116 FGQICLAYRDMCE 128
F + ++ E
Sbjct: 281 FANLYNELQNFTE 293
>gi|397166735|ref|ZP_10490179.1| dimethyladenosine transferase [Enterobacter radicincitans DSM
16656]
gi|396091823|gb|EJI89389.1| dimethyladenosine transferase [Enterobacter radicincitans DSM
16656]
Length = 233
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +C V +P AF P P+VD VV P HP+ ++
Sbjct: 108 LVAGPNSKAYGRLSVMAQYYCQVIPVLEVPPTAFAPPPKVDSAVVRLVPHTTLPHPVKEI 167
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+ + R+ + F R+K + +F V +L + P +R +SV ++
Sbjct: 168 --RTLSRITTEAFNQRRKTIRNSLGNVF-------TVEVLASLGIDPTMRAENISVAQYC 218
Query: 118 QIC 120
Q+
Sbjct: 219 QLA 221
>gi|450133673|ref|ZP_21870726.1| dimethyladenosine transferase [Streptococcus mutans NLML8]
gi|449150688|gb|EMB54445.1| dimethyladenosine transferase [Streptococcus mutans NLML8]
Length = 291
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 5/118 (4%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ T R P++ + + RV F
Sbjct: 172 LSIAVQYYMTAKIAFIVPRTVFVPAPNVDSAILKMTRREQPLVQVQDEDFFFRVGKAAFV 231
Query: 72 YRQKQVYKPASLLFPKRKRQLVVSL---LERACVKPILRPYQLSVQEFGQICLAYRDM 126
+R+K ++ + F K K ++ V L LE A +KP +R L++ +F ++ A R++
Sbjct: 232 HRRKTLWNNLTSHFGKSK-EVKVKLEQALEAADIKPSIRGEALTITDFARLADALREV 288
>gi|168464366|ref|ZP_02698269.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|419788638|ref|ZP_14314322.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Newport
str. Levine 1]
gi|195632741|gb|EDX51195.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|392616724|gb|EIW99153.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Newport
str. Levine 1]
Length = 273
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +C V +P AF P P+VD VV P +P+ D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCQVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPYPVKDI 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V L + P +R +SV ++
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VETLTEMGIDPAMRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QMA 261
>gi|422822520|ref|ZP_16870713.1| dimethyladenosine transferase [Streptococcus sanguinis SK353]
gi|422847622|ref|ZP_16894305.1| dimethyladenosine transferase [Streptococcus sanguinis SK72]
gi|324989790|gb|EGC21733.1| dimethyladenosine transferase [Streptococcus sanguinis SK353]
gi|325686620|gb|EGD28646.1| dimethyladenosine transferase [Streptococcus sanguinis SK72]
Length = 290
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 3/115 (2%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDL-PFKLIERVVSCIFR 71
LSI Q + F +P K F+P P VD ++ R P +++ K +V F
Sbjct: 172 LSIAVQYYMTAKVAFIVPRKVFVPAPNVDSAILKMVRRERPAVEVQDEKFFFKVSKASFV 231
Query: 72 YRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEFGQICLAYR 124
+R+K ++ + F K + + + + LERA + P +R LS++EF ++ A +
Sbjct: 232 HRRKTLWNNLTSCFGKSEETKGKLTAALERAELSPSVRGEALSLEEFARLADALK 286
>gi|449909418|ref|ZP_21794240.1| dimethyladenosine transferase [Streptococcus mutans OMZ175]
gi|449918898|ref|ZP_21797609.1| dimethyladenosine transferase [Streptococcus mutans 1SM1]
gi|449947156|ref|ZP_21807232.1| dimethyladenosine transferase [Streptococcus mutans 11SSST2]
gi|450070613|ref|ZP_21847670.1| dimethyladenosine transferase [Streptococcus mutans M2A]
gi|450087244|ref|ZP_21854142.1| dimethyladenosine transferase [Streptococcus mutans NV1996]
gi|450105720|ref|ZP_21860057.1| dimethyladenosine transferase [Streptococcus mutans SF14]
gi|450144219|ref|ZP_21873907.1| dimethyladenosine transferase [Streptococcus mutans 1ID3]
gi|449150931|gb|EMB54679.1| dimethyladenosine transferase [Streptococcus mutans 1ID3]
gi|449159884|gb|EMB63183.1| dimethyladenosine transferase [Streptococcus mutans 1SM1]
gi|449168958|gb|EMB71751.1| dimethyladenosine transferase [Streptococcus mutans 11SSST2]
gi|449213714|gb|EMC14043.1| dimethyladenosine transferase [Streptococcus mutans M2A]
gi|449218286|gb|EMC18301.1| dimethyladenosine transferase [Streptococcus mutans NV1996]
gi|449224119|gb|EMC23771.1| dimethyladenosine transferase [Streptococcus mutans SF14]
gi|449261359|gb|EMC58836.1| dimethyladenosine transferase [Streptococcus mutans OMZ175]
Length = 291
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 5/118 (4%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ T R P++ + + RV F
Sbjct: 172 LSIAVQYYMTAKVAFIVPRTVFVPAPNVDSAILKMTRREQPLVQVQDEDFFFRVGKAAFV 231
Query: 72 YRQKQVYKPASLLFPKRKRQLVVSL---LERACVKPILRPYQLSVQEFGQICLAYRDM 126
+R+K ++ + F K K ++ V L LE A +KP +R L++ +F ++ A R++
Sbjct: 232 HRRKTLWNNLTSHFGKSK-EVKVKLEQALEAADIKPSIRGEALTITDFARLADALREV 288
>gi|284008564|emb|CBA75122.1| dimethyladenosine transferase [Arsenophonus nasoniae]
Length = 241
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 57/123 (46%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +C + +P AF P P+VD VV P +PI D+
Sbjct: 120 LVAGPNTKAYGRLSVMAQYYCQIIPILAVPPSAFTPAPKVDSAVVRLIPHQRNPYPICDV 179
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
KL+ R+ + F R+K + S LF V E+ + P R +SV+ +
Sbjct: 180 --KLLSRITTQAFNQRRKTIRNSLSDLFS-------VQDFEQLGIDPNCRAENISVENYC 230
Query: 118 QIC 120
++
Sbjct: 231 KLA 233
>gi|410618653|ref|ZP_11329590.1| ribosomal RNA small subunit methyltransferase A [Glaciecola polaris
LMG 21857]
gi|410161822|dbj|GAC33728.1| ribosomal RNA small subunit methyltransferase A [Glaciecola polaris
LMG 21857]
Length = 269
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 9/131 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPF 59
+ A+ G + RLS+M Q C + +P +AF P P+VD +V P +V P+ +
Sbjct: 146 LAASPGNKSYGRLSVMAQYHCQIMPVIHVPPEAFNPPPKVDSAIVRLIPHKVKPVSVISE 205
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
+ +V + F R+K + K L + L + P LR LS+ +FGQI
Sbjct: 206 DSLNKVCAQAFNQRRKTIRN-------SLKESLNEAQLMSLDINPDLRAENLSLAQFGQI 258
Query: 120 C-LAYRDMCEE 129
LA R E
Sbjct: 259 ADLASRIQAES 269
>gi|416526236|ref|ZP_11742290.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. LQC 10]
gi|416533322|ref|ZP_11746290.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB30]
gi|416555397|ref|ZP_11758882.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 29N]
gi|417448513|ref|ZP_12162617.1| Dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. S5-403]
gi|353637899|gb|EHC83598.1| Dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. S5-403]
gi|363558301|gb|EHL42494.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. LQC 10]
gi|363560214|gb|EHL44361.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 29N]
gi|363568606|gb|EHL52584.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB30]
Length = 273
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +C V +P AF P P+VD VV P +P+ D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCQVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPYPVKDI 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V L + P +R +SV ++
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VETLTEMGIDPAMRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QMA 261
>gi|290581127|ref|YP_003485519.1| dimethyladenosine transferase [Streptococcus mutans NN2025]
gi|449969654|ref|ZP_21813346.1| dimethyladenosine transferase [Streptococcus mutans 2VS1]
gi|450057323|ref|ZP_21842516.1| dimethyladenosine transferase [Streptococcus mutans NLML4]
gi|450066530|ref|ZP_21846013.1| dimethyladenosine transferase [Streptococcus mutans NLML9]
gi|450092911|ref|ZP_21856324.1| dimethyladenosine transferase [Streptococcus mutans W6]
gi|450150084|ref|ZP_21876433.1| dimethyladenosine transferase [Streptococcus mutans 14D]
gi|450164985|ref|ZP_21881628.1| dimethyladenosine transferase [Streptococcus mutans B]
gi|254998026|dbj|BAH88627.1| dimethyladenosine transferase [Streptococcus mutans NN2025]
gi|449173988|gb|EMB76510.1| dimethyladenosine transferase [Streptococcus mutans 2VS1]
gi|449205395|gb|EMC06143.1| dimethyladenosine transferase [Streptococcus mutans NLML4]
gi|449208821|gb|EMC09384.1| dimethyladenosine transferase [Streptococcus mutans NLML9]
gi|449217702|gb|EMC17737.1| dimethyladenosine transferase [Streptococcus mutans W6]
gi|449233937|gb|EMC32977.1| dimethyladenosine transferase [Streptococcus mutans 14D]
gi|449241100|gb|EMC39745.1| dimethyladenosine transferase [Streptococcus mutans B]
Length = 291
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 5/118 (4%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ T R P++ + + RV F
Sbjct: 172 LSIAVQYYMTAKVAFIVPRTVFVPAPNVDSAILKMTRREQPLVQVQDEDFFFRVGKAAFV 231
Query: 72 YRQKQVYKPASLLFPKRKRQLVVSL---LERACVKPILRPYQLSVQEFGQICLAYRDM 126
+R+K ++ + F K K ++ V L LE A +KP +R L++ +F ++ A R++
Sbjct: 232 HRRKTLWNNLTSHFGKSK-EVKVKLEQALEAADIKPSIRGEALTITDFARLADALREV 288
>gi|213029736|ref|ZP_03344183.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
Length = 212
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +C V +P AF P P+VD VV P +P+ D+
Sbjct: 87 LVAGPNSKAYGRLSVMAQYYCQVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPYPVKDI 146
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V L + P +R +SV ++
Sbjct: 147 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VETLTEMGIDPAMRAENISVAQYC 197
Query: 118 QIC 120
Q+
Sbjct: 198 QMA 200
>gi|254437873|ref|ZP_05051367.1| dimethyladenosine transferase [Octadecabacter antarcticus 307]
gi|198253319|gb|EDY77633.1| dimethyladenosine transferase [Octadecabacter antarcticus 307]
Length = 279
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 5/116 (4%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G + RL+I+CQ + +P +AF P P+V VVH T P
Sbjct: 159 ITAAPGSKAYGRLAILCQWRTDAQIVMNLPPEAFSPPPKVSSAVVHLTALAKPRFPADAN 218
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+++ + + F R+K + L P + L+ A +KP R Q+ VQ F
Sbjct: 219 MLQHITATAFNQRRKMLRSSLKGLSPDIEDHLIA-----ADIKPTDRAEQIDVQRF 269
>gi|194446536|ref|YP_002039320.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|418805781|ref|ZP_13361359.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21550]
gi|418810141|ref|ZP_13365682.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22513]
gi|418816431|ref|ZP_13371923.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 21538]
gi|418820848|ref|ZP_13376279.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 22425]
gi|418825091|ref|ZP_13380405.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22462]
gi|418834277|ref|ZP_13389188.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM N1543]
gi|226732621|sp|B4T6L6.1|RSMA_SALNS RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|194405199|gb|ACF65421.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|392782252|gb|EJA38889.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22513]
gi|392784008|gb|EJA40617.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21550]
gi|392789792|gb|EJA46294.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 21538]
gi|392791586|gb|EJA48055.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 22425]
gi|392806185|gb|EJA62300.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM N1543]
gi|392817656|gb|EJA73562.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22462]
Length = 273
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +C V +P AF P P+VD VV P +P+ D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCQVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPYPVKDI 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V L + P +R +SV ++
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLDNLFS-------VETLTEMGIDPAMRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QMA 261
>gi|417950685|ref|ZP_12593803.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Vibrio splendidus ATCC 33789]
gi|342806147|gb|EGU41385.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Vibrio splendidus ATCC 33789]
Length = 271
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 54/117 (46%), Gaps = 8/117 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPF 59
+ A G + RL++M Q +C V +P AF+P P+VD VV P V P
Sbjct: 147 LAAGPGSKAYGRLTVMAQYYCKVTPVLEVPPTAFVPPPKVDSAVVRLQPYEVLPYPAKDL 206
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
K ++RV F R+K V L K +LE + P +RP L++++F
Sbjct: 207 KWLDRVCREGFNQRRKTVRNCYKSLIDK-------DVLEALGINPSMRPENLTLEQF 256
>gi|261208234|ref|ZP_05922907.1| dimethyladenosine transferase [Enterococcus faecium TC 6]
gi|289565965|ref|ZP_06446404.1| dimethyladenosine transferase [Enterococcus faecium D344SRF]
gi|294615973|ref|ZP_06695800.1| dimethyladenosine transferase [Enterococcus faecium E1636]
gi|294617634|ref|ZP_06697262.1| dimethyladenosine transferase [Enterococcus faecium E1679]
gi|430850564|ref|ZP_19468324.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E1185]
gi|431682661|ref|ZP_19524624.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E1904]
gi|260077491|gb|EEW65209.1| dimethyladenosine transferase [Enterococcus faecium TC 6]
gi|289162249|gb|EFD10110.1| dimethyladenosine transferase [Enterococcus faecium D344SRF]
gi|291591159|gb|EFF22841.1| dimethyladenosine transferase [Enterococcus faecium E1636]
gi|291596098|gb|EFF27363.1| dimethyladenosine transferase [Enterococcus faecium E1679]
gi|430535432|gb|ELA75840.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E1185]
gi|430598567|gb|ELB36304.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E1904]
Length = 294
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 6/128 (4%)
Query: 6 GMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF-KLIER 64
G + LSI Q + + F +P F+P+P VD ++ T R P +++ K R
Sbjct: 169 GTKAYGSLSIAVQYYMEANLAFIVPKTVFVPQPNVDSAILKLTRRDIPAVEVTDEKAFFR 228
Query: 65 VVSCIFRYRQKQVYKPASLLFPK--RKRQLVVSLLERACVKPILRPYQLSVQEFGQICLA 122
+ F+ R+K ++ + K + + + LE A + P R LS+QEF + A
Sbjct: 229 LTKAAFQQRRKTLWNNLQHSYGKDDQTKAWLAKSLETAGIDPKRRGETLSLQEFAALSNA 288
Query: 123 YRDMCEEM 130
M E M
Sbjct: 289 ---MSENM 293
>gi|449893205|ref|ZP_21788604.1| dimethyladenosine transferase [Streptococcus mutans SF12]
gi|449255991|gb|EMC53827.1| dimethyladenosine transferase [Streptococcus mutans SF12]
Length = 291
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 5/118 (4%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ T R P++ + + RV F
Sbjct: 172 LSIAVQYYMTAKVAFIVPRTVFVPAPNVDSAILKMTRREQPLVQVQDEDFFFRVGKAAFV 231
Query: 72 YRQKQVYKPASLLFPKRKRQLVVSL---LERACVKPILRPYQLSVQEFGQICLAYRDM 126
+R+K ++ + F K K ++ V L LE A +KP +R L++ +F ++ A R++
Sbjct: 232 HRRKTLWNNLTSHFGKSK-EVKVKLEQALEAADIKPSIRGEALTITDFARLADALREV 288
>gi|114768929|ref|ZP_01446555.1| dimethyladenosine transferase [Rhodobacterales bacterium HTCC2255]
gi|114549846|gb|EAU52727.1| dimethyladenosine transferase [Rhodobacterales bacterium HTCC2255]
Length = 280
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 57/116 (49%), Gaps = 5/116 (4%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++AT G + RL+++ Q CN I +AF P P+V VVH +P + K
Sbjct: 162 IVATPGSKAYGRLALLVQWRCNAKIVMEISPQAFTPPPKVTSAVVHIERLTNPRFEADGK 221
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
++E++V+ F R+K + P ++ +L +KP R ++S+++F
Sbjct: 222 VLEKIVAAAFNQRRKMLRVSLKAFSP-----IIEDILIDVGIKPTQRAEEISLEQF 272
>gi|421587230|ref|ZP_16032657.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Rhizobium sp. Pop5]
gi|403708323|gb|EJZ23064.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Rhizobium sp. Pop5]
Length = 275
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 54/116 (46%), Gaps = 8/116 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A E + RL ++C F +P +AF P P+V VVH TPR +P I
Sbjct: 161 IVACEDDDHYGRLGVLCGWRTQARMAFDVPPQAFTPPPKVTSTVVHLTPRENP-IPCSVA 219
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+E+V F R+K + + L ++ LL A + P R LSV+EF
Sbjct: 220 NLEKVTQAAFGQRRKMLRQSLKSLGGEK-------LLVSAGIDPARRAETLSVEEF 268
>gi|383935348|ref|ZP_09988784.1| ribosomal RNA small subunit methyltransferase A [Rheinheimera
nanhaiensis E407-8]
gi|383703442|dbj|GAB58875.1| ribosomal RNA small subunit methyltransferase A [Rheinheimera
nanhaiensis E407-8]
Length = 270
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 55/117 (47%), Gaps = 8/117 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPR-VHPIIDLPF 59
M A+ G + RLS+M Q +C + AF P P+VD VV P+ V +P
Sbjct: 147 MTASHGSKAFGRLSVMTQYYCQAMPVVEVGPGAFKPAPKVDSAVVRLLPKPVAERAKVPA 206
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+++ RV F R+K + S + LE+ + P LRP QLSV++F
Sbjct: 207 EVLNRVCLEAFNQRRKTIRNGFSNFASAEQ-------LEQLGLNPSLRPEQLSVEDF 256
>gi|450109762|ref|ZP_21861669.1| dimethyladenosine transferase [Streptococcus mutans SM6]
gi|449225856|gb|EMC25429.1| dimethyladenosine transferase [Streptococcus mutans SM6]
Length = 291
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 5/118 (4%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ T R P++ + + RV F
Sbjct: 172 LSIAVQYYMTAKIAFIVPRTVFVPAPNVDSAILKMTRREQPLVQVQDEDFFFRVGKAAFV 231
Query: 72 YRQKQVYKPASLLFPKRKRQLVVSL---LERACVKPILRPYQLSVQEFGQICLAYRDM 126
+R+K ++ + F K K ++ V L LE A +KP +R L++ +F ++ A R++
Sbjct: 232 HRRKTLWNNLTSHFGKSK-EVKVKLEQALEAADIKPSIRGEALTITDFARLADALREV 288
>gi|163759131|ref|ZP_02166217.1| dimethyladenosine transferase [Hoeflea phototrophica DFL-43]
gi|162283535|gb|EDQ33820.1| dimethyladenosine transferase [Hoeflea phototrophica DFL-43]
Length = 276
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 54/118 (45%), Gaps = 12/118 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+IA G RL ++ + D F +P +AF P P+V VV PR P LP +
Sbjct: 162 IIAAPGSNHFGRLGVLAGWLTHADILFDVPPQAFTPPPKVTSSVVQLVPRADP---LPCE 218
Query: 61 L--IERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
L +ERV F R+K + + L + +LLE + P R LSV+EF
Sbjct: 219 LAKLERVTQAAFGQRRKMLRQSLKPLGGE-------ALLESVGIDPARRAETLSVEEF 269
>gi|149191630|ref|ZP_01869874.1| dimethyladenosine transferase [Vibrio shilonii AK1]
gi|148834530|gb|EDL51523.1| dimethyladenosine transferase [Vibrio shilonii AK1]
Length = 268
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 57/121 (47%), Gaps = 16/121 (13%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF- 59
+ A G + RL++M Q +C V +P AF+P P+VD VV R+ P +LP+
Sbjct: 147 LAAGPGTKAYGRLTVMAQYYCKVVPVLEVPPTAFVPPPKVDSAVV----RLVPYEELPYP 202
Query: 60 ----KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQE 115
K ++RV F R+K V K + LE V P +RP L++Q+
Sbjct: 203 ATSLKWLDRVCRDGFNQRRKTVRN-------CYKSLMSAETLEELGVNPSMRPENLTLQQ 255
Query: 116 F 116
F
Sbjct: 256 F 256
>gi|410641638|ref|ZP_11352157.1| ribosomal RNA small subunit methyltransferase A [Glaciecola
chathamensis S18K6]
gi|410644838|ref|ZP_11355310.1| ribosomal RNA small subunit methyltransferase A [Glaciecola
agarilytica NO2]
gi|410135636|dbj|GAC03709.1| ribosomal RNA small subunit methyltransferase A [Glaciecola
agarilytica NO2]
gi|410138540|dbj|GAC10344.1| ribosomal RNA small subunit methyltransferase A [Glaciecola
chathamensis S18K6]
Length = 268
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 60/125 (48%), Gaps = 9/125 (7%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPF 59
+ A+ G + RLS+M Q C++ +P AF P P+VD VV P +V P+
Sbjct: 146 LAASPGNKNYGRLSVMAQYHCHIMPVIHVPPGAFNPPPKVDSAVVRLIPHKVRPVAVKSE 205
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
+++ RV + F R+K + K + + L + P LR LS+ +FGQI
Sbjct: 206 EVLNRVCAQAFNQRRKTIRN-------SLKESVSEAQLLSLDINPELRAENLSLAQFGQI 258
Query: 120 C-LAY 123
LA+
Sbjct: 259 ADLAF 263
>gi|385815093|ref|YP_005851484.1| Dimethyladenosine transferase [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
gi|325125130|gb|ADY84460.1| Dimethyladenosine transferase [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
Length = 296
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 61/129 (47%), Gaps = 4/129 (3%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G + LSI Q +VD + +F+P+P+VD VV TP P K
Sbjct: 171 LAAQPGSKAYGPLSIAVQTQMSVDLALEVGHASFMPQPKVDSAVVVLTPLEKPADVGDRK 230
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFP-KRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
RVV F R+K + L P K R+ +++ L+ A P RP QL++ +F +I
Sbjct: 231 QFNRVVKLCFAQRRKTLANNLKTLLPDKEDREKLLADLDLA---PRQRPEQLAISDFIRI 287
Query: 120 CLAYRDMCE 128
A +M +
Sbjct: 288 SQAIAEMNK 296
>gi|333396677|ref|ZP_08478492.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Lactobacillus coryniformis subsp. coryniformis KCTC
3167]
Length = 296
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 59/131 (45%), Gaps = 3/131 (2%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVH-PIIDLPF 59
+ A G + LS+ Q V F +P F+P+P VD +V T V P +
Sbjct: 165 LAAAPGSKAYGSLSVAVQYQMTVKLAFIVPKTVFVPQPNVDSAIVSLTRHVTPPAVATDE 224
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPK--RKRQLVVSLLERACVKPILRPYQLSVQEFG 117
K+ R+V F R+K ++ + L+ K + + +L + P +R +LSV +F
Sbjct: 225 KVFARLVRGSFAQRRKSLWNNLTALYGKDATTKAALTEVLAAEKIDPGIRGERLSVTDFV 284
Query: 118 QICLAYRDMCE 128
++ A D +
Sbjct: 285 RLANAISDHAK 295
>gi|406037994|ref|ZP_11045358.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Acinetobacter parvus DSM 16617 = CIP 108168]
Length = 270
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 53/117 (45%), Gaps = 8/117 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPF 59
+ A ++ RLS+M Q +C F +P +F P P+V V P PII
Sbjct: 152 ITAVPNTKEYGRLSVMIQYFCKPTFLFEVPPGSFNPPPKVTSAVFRLEPYETKPIIAKNE 211
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
K + R+V +F R+K + K LV E+A V P+ RP LS+ +F
Sbjct: 212 KALARLVGHVFTQRRKTLRN-------SLKGMLVEEGFEKAGVDPMARPETLSLADF 261
>gi|343505732|ref|ZP_08743289.1| dimethyladenosine transferase [Vibrio ichthyoenteri ATCC 700023]
gi|342806496|gb|EGU41718.1| dimethyladenosine transferase [Vibrio ichthyoenteri ATCC 700023]
Length = 268
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 55/119 (46%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G + RL++M Q +C V +P AF+P P+VD VV P HP L
Sbjct: 147 LAAGPGSKAYGRLTVMAQYFCKVVPVLEVPPTAFVPPPKVDSAVVRLMPYEVLPHPATSL 206
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
K +ERV F R+K + K + V LE + P LRP L++++F
Sbjct: 207 --KWLERVCREGFNQRRKTIRN-------CYKGLIEVETLEELGINPALRPENLTLEQF 256
>gi|430853691|ref|ZP_19471418.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E1258]
gi|430540244|gb|ELA80454.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E1258]
Length = 294
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 6/128 (4%)
Query: 6 GMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF-KLIER 64
G + LSI Q + F +P F+P+P VD ++ T R P +++ K R
Sbjct: 169 GTKAYGSLSIAVQYYMEASLAFIVPKTVFVPQPNVDSAILKLTRRDIPAVEVTDEKAFFR 228
Query: 65 VVSCIFRYRQKQVYKPASLLFPK--RKRQLVVSLLERACVKPILRPYQLSVQEFGQICLA 122
+ F+ R+K ++ + K + + + LE A + P R LS+QEF + A
Sbjct: 229 LTKAAFQQRRKTLWNNLQHSYGKDDQTKAWLAKSLETAGIDPKRRGETLSLQEFAALSNA 288
Query: 123 YRDMCEEM 130
M E+M
Sbjct: 289 ---MSEDM 293
>gi|91227108|ref|ZP_01261592.1| dimethyladenosine transferase [Vibrio alginolyticus 12G01]
gi|254229739|ref|ZP_04923147.1| dimethyladenosine transferase [Vibrio sp. Ex25]
gi|262392439|ref|YP_003284293.1| dimethyladenosine transferase [Vibrio sp. Ex25]
gi|269964664|ref|ZP_06178902.1| dimethyladenosine transferase [Vibrio alginolyticus 40B]
gi|451971107|ref|ZP_21924329.1| dimethyladenosine transferase [Vibrio alginolyticus E0666]
gi|91188760|gb|EAS75047.1| dimethyladenosine transferase [Vibrio alginolyticus 12G01]
gi|151937706|gb|EDN56556.1| dimethyladenosine transferase [Vibrio sp. Ex25]
gi|262336033|gb|ACY49828.1| dimethyladenosine transferase [Vibrio sp. Ex25]
gi|269830563|gb|EEZ84784.1| dimethyladenosine transferase [Vibrio alginolyticus 40B]
gi|451932923|gb|EMD80595.1| dimethyladenosine transferase [Vibrio alginolyticus E0666]
Length = 269
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 56/119 (47%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVH---PIIDL 57
+ A G + RL++M Q +C V +P AF+P P+VD VV P P DL
Sbjct: 147 LAAGPGSKAYGRLTVMAQYYCKVVPVLEVPPTAFVPPPKVDSAVVRLVPYEELPCPAKDL 206
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+L++RV F R+K V K L +LE V P +RP L++++F
Sbjct: 207 --RLLDRVCREGFNQRRKTVRN-------CYKSLLSTEVLEELGVNPSMRPENLTLEQF 256
>gi|407698929|ref|YP_006823716.1| dimethyladenosine transferase [Alteromonas macleodii str. 'Black
Sea 11']
gi|407248076|gb|AFT77261.1| dimethyladenosine transferase [Alteromonas macleodii str. 'Black
Sea 11']
Length = 275
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 53/123 (43%), Gaps = 8/123 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDL-PF 59
+ A G + RLS+M Q +C+V +P AF P P+VD VV P P +D+
Sbjct: 150 LAAGPGSKNYGRLSVMAQYYCHVIPVLNVPPGAFKPPPKVDSAVVKLVPHQTPPVDVESV 209
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
+ERV + F R+K + K L + + P R LS+ +F I
Sbjct: 210 NTLERVCAQAFNQRRKTIRN-------SLKDSLSEEEIRELGIDPTSRAEVLSLNDFATI 262
Query: 120 CLA 122
A
Sbjct: 263 ANA 265
>gi|344206099|ref|YP_004791240.1| ribosomal RNA small subunit methyltransferase A [Stenotrophomonas
maltophilia JV3]
gi|343777461|gb|AEM50014.1| Ribosomal RNA small subunit methyltransferase A [Stenotrophomonas
maltophilia JV3]
Length = 267
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 56/125 (44%), Gaps = 14/125 (11%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDL-PF 59
M A G + RLS+M Q +C V F +P AF P P+VD VV PR I++
Sbjct: 151 MAAGPGSKVYGRLSVMLQAYCQVTSLFVVPPGAFRPPPKVDSAVVRLVPRDPASININDH 210
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLE--RACVKPILRPYQLSVQEFG 117
K VV F R+K + + VVS + A V+P R QL V EF
Sbjct: 211 KRFAEVVKAAFGQRRKTL---------RNALNNVVSAEQFIAAGVRPDARAEQLDVAEF- 260
Query: 118 QICLA 122
I LA
Sbjct: 261 -IALA 264
>gi|336125255|ref|YP_004567303.1| dimethyladenosine transferase [Vibrio anguillarum 775]
gi|335342978|gb|AEH34261.1| Dimethyladenosine transferase [Vibrio anguillarum 775]
Length = 268
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 56/119 (47%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G + RL++M Q +C V +P AF+P P+VD VV P HP ++
Sbjct: 147 LAAGPGSKAYGRLTVMTQYFCKVVPVLEVPPTAFVPPPKVDSAVVRLVPYEVLPHPTTNM 206
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
K +ERV F R+K V L + V LE V P +RP L++++F
Sbjct: 207 --KWLERVCRDGFNQRRKTVRNCYKGL-------IEVETLEELGVNPGMRPENLTLEQF 256
>gi|323493620|ref|ZP_08098741.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Vibrio brasiliensis LMG 20546]
gi|323312143|gb|EGA65286.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Vibrio brasiliensis LMG 20546]
Length = 268
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G + RL++M Q +C V +P AF+P P+VD VV P HP L
Sbjct: 147 LAAGPGTKAYGRLTVMAQYFCKVVPVLEVPPTAFVPPPKVDSAVVRLVPYENLPHPATSL 206
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
K ++RV F R+K V L L LE V P +RP L++++F
Sbjct: 207 --KWLDRVCREGFNQRRKTVRNCYKAL-------LSTETLEELGVNPGMRPENLTLEQF 256
>gi|27364120|ref|NP_759648.1| KsgA/Dim1 family 16S ribosomal RNA methyltransferase [Vibrio
vulnificus CMCP6]
gi|37678662|ref|NP_933271.1| dimethyladenosine transferase [Vibrio vulnificus YJ016]
gi|320157505|ref|YP_004189884.1| dimethyladenosine transferase [Vibrio vulnificus MO6-24/O]
gi|31340188|sp|Q8DED2.1|RSMA_VIBVU RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|62900560|sp|Q7MP86.1|RSMA_VIBVY RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|27360238|gb|AAO09175.1| dimethyladenosine transferase [Vibrio vulnificus CMCP6]
gi|37197402|dbj|BAC93242.1| dimethyladenosine transferase [Vibrio vulnificus YJ016]
gi|319932817|gb|ADV87681.1| dimethyladenosine transferase [Vibrio vulnificus MO6-24/O]
Length = 268
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 57/119 (47%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G + RL++M Q +C V +P AF+P P+VD VV P HP +L
Sbjct: 147 LAAGPGSKAYGRLTVMAQYYCKVVPVLEVPPTAFVPPPKVDSAVVRLVPYETLPHPANNL 206
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+ +ERV F R+K V L ++ +LE V P +RP L++Q+F
Sbjct: 207 --QWLERVCREGFNQRRKTVRNCYKSLMSEQ-------VLEELGVNPGMRPENLTLQQF 256
>gi|450034192|ref|ZP_21834212.1| dimethyladenosine transferase [Streptococcus mutans M21]
gi|449196615|gb|EMB97870.1| dimethyladenosine transferase [Streptococcus mutans M21]
Length = 291
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 5/118 (4%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ T R P++ + + RV F
Sbjct: 172 LSIAVQYYMTAKIAFIVPRTVFVPAPNVDSAILKMTRREQPLVQVQDEDFFFRVGKAAFV 231
Query: 72 YRQKQVYKPASLLFPKRKRQLVVSL---LERACVKPILRPYQLSVQEFGQICLAYRDM 126
+R+K ++ + F K K ++ V L LE A +KP +R L++ +F ++ A R++
Sbjct: 232 HRRKTLWNNLTSHFGKSK-EVKVKLEQALEAADIKPSIRGEALTITDFARLADALREV 288
>gi|424057998|ref|ZP_17795515.1| ribosomal RNA small subunit methyltransferase A [Acinetobacter
nosocomialis Ab22222]
gi|425739845|ref|ZP_18858034.1| dimethyladenosine transferase [Acinetobacter baumannii WC-487]
gi|407439718|gb|EKF46241.1| ribosomal RNA small subunit methyltransferase A [Acinetobacter
nosocomialis Ab22222]
gi|425495907|gb|EKU62066.1| dimethyladenosine transferase [Acinetobacter baumannii WC-487]
Length = 270
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 55/117 (47%), Gaps = 8/117 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPF 59
+ A ++ RLS+M Q +C F +P AF P P+V V P PI+
Sbjct: 152 ITAEPNTKEYGRLSVMIQYYCQPTFLFEVPAGAFNPPPKVTSAVFRLVPYEQKPIVAKDE 211
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
K + R+V+ +F R+K + SL K L E+A V P+ RP L++ EF
Sbjct: 212 KALARLVAHVFTQRRKTLRN--SL-----KGMLAEDGFEKAGVDPMARPETLTLVEF 261
>gi|116618707|ref|YP_819078.1| dimethyladenosine transferase [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
gi|381337085|ref|YP_005174860.1| KsgA/Dim1 family 16S ribosomal RNA methyltransferase [Leuconostoc
mesenteroides subsp. mesenteroides J18]
gi|122271093|sp|Q03VR7.1|RSMA_LEUMM RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|116097554|gb|ABJ62705.1| dimethyladenosine transferase [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
gi|356645051|gb|AET30894.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Leuconostoc mesenteroides subsp. mesenteroides J18]
Length = 295
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 6/127 (4%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPFKL 61
A G + L++ Q + +P +F P P VD VV TP + +++ KL
Sbjct: 166 AAVGTKSYGVLTLTIQYFAQATLAIKVPASSFNPSPNVDSAVVKLTPLKPTTVVENVGKL 225
Query: 62 IERVVSCIFRYRQKQVYKPASLLFPK---RKRQLVVSLLERACVKPILRPYQLSVQEFGQ 118
V+ F +R+K ++ + K K QL V+ L+ A + P +R +L++++F Q
Sbjct: 226 F-GVIKGSFSHRRKSLWNNMLQTYGKDAGTKEQLTVA-LKSAQIDPAIRAERLNLEQFTQ 283
Query: 119 ICLAYRD 125
+ LA RD
Sbjct: 284 LYLALRD 290
>gi|406595615|ref|YP_006746745.1| dimethyladenosine transferase [Alteromonas macleodii ATCC 27126]
gi|407682578|ref|YP_006797752.1| dimethyladenosine transferase [Alteromonas macleodii str. 'English
Channel 673']
gi|407686474|ref|YP_006801647.1| dimethyladenosine transferase [Alteromonas macleodii str. 'Balearic
Sea AD45']
gi|406372936|gb|AFS36191.1| dimethyladenosine transferase [Alteromonas macleodii ATCC 27126]
gi|407244189|gb|AFT73375.1| dimethyladenosine transferase [Alteromonas macleodii str. 'English
Channel 673']
gi|407289854|gb|AFT94166.1| dimethyladenosine transferase [Alteromonas macleodii str. 'Balearic
Sea AD45']
Length = 275
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 53/123 (43%), Gaps = 8/123 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDL-PF 59
+ A G + RLS+M Q +C+V +P AF P P+VD VV P P +D+
Sbjct: 150 LAAGPGSKNYGRLSVMAQYYCHVIPVLNVPPGAFKPPPKVDSAVVKLVPHQAPPVDVESV 209
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
+ERV + F R+K + K L + + P R LS+ +F I
Sbjct: 210 NTLERVCAQAFNQRRKTIRN-------SLKDSLSEEEIRELGIDPTSRAEVLSLNDFATI 262
Query: 120 CLA 122
A
Sbjct: 263 ANA 265
>gi|390449062|ref|ZP_10234674.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Nitratireductor aquibiodomus RA22]
gi|389664852|gb|EIM76336.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Nitratireductor aquibiodomus RA22]
Length = 276
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 52/116 (44%), Gaps = 8/116 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A+ G + RL ++ F +P +AF P P+V VVH PR P+ P K
Sbjct: 162 IVASAGDKAYGRLGVLAGWRTEAKIAFDLPPQAFTPAPKVTSSVVHIVPRAAPLAVEPAK 221
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
L ++ F R+K + + L + +LL RA + R LSV EF
Sbjct: 222 L-AKITEAAFGQRRKMLRQSLKSLGGE-------ALLARAGIDATRRAETLSVAEF 269
>gi|332305311|ref|YP_004433162.1| dimethyladenosine transferase [Glaciecola sp. 4H-3-7+YE-5]
gi|332172640|gb|AEE21894.1| dimethyladenosine transferase [Glaciecola sp. 4H-3-7+YE-5]
Length = 268
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 60/125 (48%), Gaps = 9/125 (7%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPF 59
+ A+ G + RLS+M Q C++ +P AF P P+VD VV P +V P+
Sbjct: 146 LAASPGNKNYGRLSVMAQYHCHIMPVIHVPPGAFNPPPKVDSAVVRLIPHKVRPVAVKSE 205
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
+++ RV + F R+K + K + + L + P LR LS+ +FGQI
Sbjct: 206 EVLNRVCAQAFNQRRKTIRN-------SLKESVSEAQLLSLDINPELRAENLSLAQFGQI 258
Query: 120 C-LAY 123
LA+
Sbjct: 259 ADLAF 263
>gi|251794062|ref|YP_003008793.1| dimethyladenosine transferase [Paenibacillus sp. JDR-2]
gi|247541688|gb|ACS98706.1| dimethyladenosine transferase [Paenibacillus sp. JDR-2]
Length = 298
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
M A G ++ LS+ Q +C +P FIP+P VD V+ R P +++ +
Sbjct: 168 MAAKPGGKEYGSLSVAVQYYCEPQLVCIVPHTVFIPQPNVDSAVIKLAVREKPPVEVEDE 227
Query: 61 L-IERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
R+V F R+K + + K +R+ + LL + P+ R LS+ EF +I
Sbjct: 228 AHFFRIVQASFAQRRKTLANNLTAFVGKERREEMTQLLISCEIDPVRRGETLSLDEFARI 287
Query: 120 CLAY 123
A+
Sbjct: 288 SRAF 291
>gi|332140204|ref|YP_004425942.1| dimethyladenosine transferase [Alteromonas macleodii str. 'Deep
ecotype']
gi|410860384|ref|YP_006975618.1| dimethyladenosine transferase [Alteromonas macleodii AltDE1]
gi|327550226|gb|AEA96944.1| dimethyladenosine transferase [Alteromonas macleodii str. 'Deep
ecotype']
gi|410817646|gb|AFV84263.1| dimethyladenosine transferase [Alteromonas macleodii AltDE1]
Length = 275
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 53/123 (43%), Gaps = 8/123 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIID-LPF 59
+ A G + RLS+M Q +C+V +P AF P P+VD VV P P +D +
Sbjct: 150 LAAGPGSKNYGRLSVMAQYYCHVIPVLNVPPGAFKPPPKVDSAVVKLVPHQSPPVDVVSV 209
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
+ERV + F R+K + K L + + P R LS+ +F I
Sbjct: 210 STLERVCAQAFNQRRKTIRN-------SLKDSLSEEEIRELGIDPTCRAEVLSLNDFATI 262
Query: 120 CLA 122
A
Sbjct: 263 ANA 265
>gi|213420100|ref|ZP_03353166.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
Length = 168
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +C V +P AF P P+VD VV P +P+ D+
Sbjct: 43 LVAGPNSKAYGRLSVMAQYYCQVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPYPVKDI 102
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V L + P +R +SV ++
Sbjct: 103 --RVLSRITTEAFNQRRKTIRNSLGNLF-------SVETLTEMGIDPAMRAENISVAQYC 153
Query: 118 QIC 120
Q+
Sbjct: 154 QMA 156
>gi|423138604|ref|ZP_17126242.1| dimethyladenosine transferase [Salmonella enterica subsp. houtenae
str. ATCC BAA-1581]
gi|379051158|gb|EHY69049.1| dimethyladenosine transferase [Salmonella enterica subsp. houtenae
str. ATCC BAA-1581]
Length = 273
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +C V +P AF P P+VD VV P +P+ D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCQVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPYPVKDI 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V L + P +R +SV ++
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VETLTGMGIDPAMRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QMA 261
>gi|418029917|ref|ZP_12668434.1| Methyltransferase [Lactobacillus delbrueckii subsp. bulgaricus CNCM
I-1632]
gi|354688380|gb|EHE88419.1| Methyltransferase [Lactobacillus delbrueckii subsp. bulgaricus CNCM
I-1632]
Length = 275
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 57/126 (45%), Gaps = 2/126 (1%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G + LSI Q +VD + +F+P+P+VD VV TP P K
Sbjct: 150 LAAQPGSKAYGPLSIAVQTQMSVDLALEVGHASFMPQPKVDSAVVVLTPLEKPADVGDRK 209
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
RVV F R+K + L P ++ + LL + P RP QL++ +F +I
Sbjct: 210 QFNRVVKLCFAQRRKTLANNLKTLLPDKEDR--EKLLADLDLDPRQRPEQLAISDFIRIS 267
Query: 121 LAYRDM 126
A +M
Sbjct: 268 QAIAEM 273
>gi|339497389|ref|ZP_08658365.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Leuconostoc pseudomesenteroides KCTC 3652]
Length = 303
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 6/127 (4%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPFKL 61
A G + L++ Q + +P +F P P VD VV TP + +++ KL
Sbjct: 174 AAVGTKSYGVLTLTIQYFAQATLAIKVPASSFNPSPNVDSAVVKLTPLKPTTVVENVGKL 233
Query: 62 IERVVSCIFRYRQKQVYKPASLLFPK---RKRQLVVSLLERACVKPILRPYQLSVQEFGQ 118
V+ F +R+K ++ + K K QL V+ L+ A + P +R +L++++F Q
Sbjct: 234 F-GVIKGSFSHRRKSLWNNMLQTYGKDAGTKEQLTVA-LKSAQIDPAIRAERLNLEQFTQ 291
Query: 119 ICLAYRD 125
+ LA RD
Sbjct: 292 LYLALRD 298
>gi|388259330|ref|ZP_10136503.1| rRNA (adenine-N6,N6)-dimethyltransferase [Cellvibrio sp. BR]
gi|387936768|gb|EIK43326.1| rRNA (adenine-N6,N6)-dimethyltransferase [Cellvibrio sp. BR]
Length = 280
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 55/117 (47%), Gaps = 8/117 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVH-PIIDLPF 59
M A G RL IM Q +C V+ F +P +F P P+VD +V TP P +
Sbjct: 149 MAAQPGDGAYGRLGIMVQYYCAVEDLFDVPPTSFDPAPKVDSAIVRLTPYAQLPYVANNI 208
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
K +E +V+ F+ R+K + K+ L +E V LRP ++S+ E+
Sbjct: 209 KSLETLVNVAFQQRRKTLRN-------SLKQLLSAEQMESLPVDLGLRPEEISLPEY 258
>gi|387928189|ref|ZP_10130867.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Bacillus methanolicus PB1]
gi|387587775|gb|EIJ80097.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Bacillus methanolicus PB1]
Length = 292
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 3/121 (2%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPR-VHPIIDLPFKL 61
A G + LSI Q + D +P F+P+P VD V+ T R P+
Sbjct: 164 AKPGSKDYGSLSIAVQYYTEPDTVMVVPKTVFVPQPNVDSAVIRLTRREAAPVKVRDEAF 223
Query: 62 IERVVSCIFRYRQKQVYKPASLLFP--KRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
+V+ F +R+K + + P K K++ +++ L++A + R LS++EFG++
Sbjct: 224 FFQVIKASFAHRRKTLLNNLTSQLPEGKEKKEAILAALDQAGIDSGRRGETLSIEEFGRL 283
Query: 120 C 120
Sbjct: 284 S 284
>gi|406038548|ref|ZP_11045903.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Acinetobacter ursingii DSM 16037 = CIP 107286]
Length = 270
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 8/117 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVH-PIIDLPF 59
+ A ++ RLS+M Q +C F +P AF P P+V V P + PI+
Sbjct: 152 ITAAPNSKEYGRLSVMIQYYCQPTFLFEVPAGAFNPPPKVTSAVFRLVPYLEKPIVAQDE 211
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
K + R+V+ +F R+K + K L E+A V P+ RP L++ +F
Sbjct: 212 KALSRLVAHVFTQRRKTLRN-------SLKGMLSEDGFEQAGVDPMARPETLTLAQF 261
>gi|289627688|ref|ZP_06460642.1| dimethyladenosine transferase [Pseudomonas syringae pv. aesculi
str. NCPPB 3681]
gi|422583663|ref|ZP_16658784.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. aesculi str. 0893_23]
gi|330868491|gb|EGH03200.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. aesculi str. 0893_23]
Length = 268
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 54/123 (43%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
M A G RLSIM Q V+H F + AF P P+VD +V P HP D
Sbjct: 145 MAAGPGGGDWGRLSIMVQYHWRVEHLFNVGPGAFNPPPKVDSAIVRLVPYETLPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ER+V F R+K + LL L + + V LRP QL + F
Sbjct: 204 -HRVLERIVREAFNQRRKTLRNTLKLL-------LTSDEITASGVDGSLRPEQLDLAAFV 255
Query: 118 QIC 120
++
Sbjct: 256 RLA 258
>gi|365833834|ref|ZP_09375286.1| dimethyladenosine transferase [Hafnia alvei ATCC 51873]
gi|364570882|gb|EHM48483.1| dimethyladenosine transferase [Hafnia alvei ATCC 51873]
Length = 270
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 59/134 (44%), Gaps = 15/134 (11%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RL++M Q +C V +P AF P P+VD VV P HP+ D+
Sbjct: 148 LVAGPNSKAYGRLTVMAQYYCQVIPVLEVPPTAFRPAPKVDSAVVRLIPHATIPHPVKDI 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K V LF + L + P R +SV+ +
Sbjct: 208 --RVLSRITTEAFNQRRKTVRNSLGHLFTPEQ-------LTELGIDPAQRAENISVENY- 257
Query: 118 QICLAYRDMCEEMP 131
C +CE+ P
Sbjct: 258 --CKLANWLCEKTP 269
>gi|340348841|ref|ZP_08671868.1| dimethyladenosine transferase [Prevotella nigrescens ATCC 33563]
gi|339613016|gb|EGQ17810.1| dimethyladenosine transferase [Prevotella nigrescens ATCC 33563]
Length = 266
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 5/120 (4%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
M A G + LS++ Q W +V++ FT+ F P P+V V+ T +D K
Sbjct: 140 MAAQPGNKTYGILSVLIQAWYDVEYLFTVDEDVFNPPPKVKSAVIRMTRNSVSKLDCNEK 199
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
L +R+V +F R+K + +FP R+ E+ + RP QL++ +F ++
Sbjct: 200 LFKRLVKTVFNQRRKMLRVSLRQMFPAEPRE---GFYEQEVMTK--RPEQLTIAQFVELT 254
>gi|333909183|ref|YP_004482769.1| ribosomal RNA small subunit methyltransferase A [Marinomonas
posidonica IVIA-Po-181]
gi|333479189|gb|AEF55850.1| Ribosomal RNA small subunit methyltransferase A [Marinomonas
posidonica IVIA-Po-181]
Length = 266
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 51/110 (46%), Gaps = 8/110 (7%)
Query: 12 RLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPFKLIERVVSCIF 70
RLS+M Q +C VD F + ++F P P+VD +V TP + P K +E VV F
Sbjct: 156 RLSVMAQYYCAVDSLFVVGPESFDPAPKVDSAIVRMTPYKTLPFSTADVKKLEDVVRIGF 215
Query: 71 RYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
+ R+K L K L + P LRP +L V+EF I
Sbjct: 216 QQRRKT-------LRNNYKGVLDQDDFAHLGIDPSLRPERLDVKEFVAIT 258
>gi|307946738|ref|ZP_07662073.1| dimethyladenosine transferase [Roseibium sp. TrichSKD4]
gi|307770402|gb|EFO29628.1| dimethyladenosine transferase [Roseibium sp. TrichSKD4]
Length = 280
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 6/123 (4%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A G + RL ++ C F I +AF P P+V VVH P H +
Sbjct: 161 IVAKPGSKAYGRLGVLASWRCQSGMLFDIGPQAFTPPPKVTSAVVHLVP-THSPLPCDLN 219
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
++E++ + F R+K + ASL K + LLE A ++P R Q+ V+ F +I
Sbjct: 220 ILEKITAAAFGQRRKMLR--ASL---KSLGKPPEPLLETAGIEPTTRAEQVDVEGFVRIA 274
Query: 121 LAY 123
AY
Sbjct: 275 NAY 277
>gi|365541042|ref|ZP_09366217.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Vibrio ordalii ATCC 33509]
Length = 268
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 56/119 (47%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G + RL++M Q +C V +P AF+P P+VD VV P HP ++
Sbjct: 147 LAAGPGSKAYGRLTVMTQYFCKVVPVLEVPPTAFVPPPKVDSAVVRLVPYEVLPHPTTNM 206
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
K +ERV F R+K V L + V LE V P +RP L++++F
Sbjct: 207 --KWLERVCREGFNQRRKTVRNCYKGL-------IEVETLEELGVNPGMRPENLTLEQF 256
>gi|89075559|ref|ZP_01161964.1| dimethyladenosine transferase [Photobacterium sp. SKA34]
gi|89048699|gb|EAR54271.1| dimethyladenosine transferase [Photobacterium sp. SKA34]
Length = 274
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 55/117 (47%), Gaps = 8/117 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPF 59
+ A G + RL++M Q +C V +P ++F+P P+VD VV TP V P
Sbjct: 148 LAAGPGSKAYGRLTVMAQYYCRVMPVLEVPPESFVPAPKVDSAVVRLTPYEVLPFPCTNL 207
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
K ++RV F R+K + LF + LE V P RP ++V++F
Sbjct: 208 KWLDRVCREGFNQRRKTIRNCYKALFTAEQ-------LEALGVNPGHRPENITVEQF 257
>gi|90411944|ref|ZP_01219952.1| dimethyladenosine transferase [Photobacterium profundum 3TCK]
gi|90327202|gb|EAS43574.1| dimethyladenosine transferase [Photobacterium profundum 3TCK]
Length = 271
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G + RL++M Q + V +P ++F P P+VD VV TP HP +L
Sbjct: 148 LAAGPGCKAYGRLTVMAQYYSRVTPVLEVPPESFTPAPKVDSAVVRLTPYEVLPHPCTNL 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
K ++RV F R+K + L L V LE V P LRP +++Q+F
Sbjct: 208 --KWLDRVCREGFNQRRKTIRNCYKAL-------LTVEQLEHLGVNPGLRPENITLQQFV 258
Query: 118 QIC 120
++
Sbjct: 259 KMA 261
>gi|429108843|ref|ZP_19170613.1| Dimethyladenosine transferase [Cronobacter malonaticus 507]
gi|426310000|emb|CCJ96726.1| Dimethyladenosine transferase [Cronobacter malonaticus 507]
Length = 233
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +C V +P AF P P+VD VV P HP+ +L
Sbjct: 108 LVAGPNSKAYGRLSVMAQYFCQVIPVLEVPPTAFTPPPKVDSAVVRLVPHATPPHPVKEL 167
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+L+ R+ + F R+K + +F +L + P +R +SV ++
Sbjct: 168 --RLLSRLTTEAFNQRRKTIRNSLGNVFSPE-------ILTSLGIDPAMRAENISVAQYC 218
Query: 118 QIC 120
Q+
Sbjct: 219 QMA 221
>gi|392531478|ref|ZP_10278615.1| dimethyladenosine 16S ribosomal RNA transferase [Carnobacterium
maltaromaticum ATCC 35586]
gi|414085434|ref|YP_006994145.1| dimethyladenosine transferase [Carnobacterium maltaromaticum LMA28]
gi|412999021|emb|CCO12830.1| dimethyladenosine transferase [Carnobacterium maltaromaticum LMA28]
Length = 297
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 3/125 (2%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHP-IIDLPF 59
+ A G + LSI Q + + F +P F+P+P VD ++ T R P +I
Sbjct: 164 ITAAPGTKAYGSLSIAIQYYMEAEIAFIVPKTVFVPQPNVDSAIIKLTRREQPSVIVKNE 223
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEFG 117
K+ +V F R+K ++ + + K + ++ +V LE A + P R LS+ EFG
Sbjct: 224 KIFFQVARAAFVQRRKTLWNNLLVRYGKEEEIKEKLVKALELADIDPKRRGETLSLAEFG 283
Query: 118 QICLA 122
++ A
Sbjct: 284 RLSDA 288
>gi|116251330|ref|YP_767168.1| dimethyladenosine transferase [Rhizobium leguminosarum bv. viciae
3841]
gi|118600891|sp|Q1MJ01.1|RSMA_RHIL3 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|115255978|emb|CAK07059.1| putative dimethyladenosine transferase [Rhizobium leguminosarum bv.
viciae 3841]
Length = 275
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 54/116 (46%), Gaps = 8/116 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A E + RL ++C F +P +AF P P+V VV TPR +P I
Sbjct: 161 IVANEDDDHYGRLGVLCGWRTEARMAFDVPPQAFTPPPKVTSTVVQLTPRENP-IPCAVS 219
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+E+V F R+K + + L +R LL +A + P R LSV+EF
Sbjct: 220 NLEKVTQAAFGQRRKMLRQSLKPLGGER-------LLVKAGIDPARRAETLSVKEF 268
>gi|422850037|ref|ZP_16896713.1| dimethyladenosine transferase [Streptococcus sanguinis SK115]
gi|325688925|gb|EGD30933.1| dimethyladenosine transferase [Streptococcus sanguinis SK115]
Length = 290
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 3/115 (2%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDL-PFKLIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ R P +++ K +V F
Sbjct: 172 LSIAVQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRERPAVEVQDEKFFFKVSKASFV 231
Query: 72 YRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEFGQICLAYR 124
+R+K ++ + F K + + + + LERA + P +R LS++EF ++ A +
Sbjct: 232 HRRKTLWNNLTSYFGKSEETKGKLTAALERANLSPSVRGEALSLEEFARLADALK 286
>gi|88704595|ref|ZP_01102308.1| Dimethyladenosine transferase [Congregibacter litoralis KT71]
gi|88700916|gb|EAQ98022.1| Dimethyladenosine transferase [Congregibacter litoralis KT71]
Length = 268
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPII-DLPF 59
+ AT G + RL IM Q C + F +P +AF P P+V ++ TP P+ D
Sbjct: 147 LTATPGNKHWGRLGIMAQYLCRTELLFEVPPEAFDPPPKVQSAIIRLTPHQSPLYPDCDS 206
Query: 60 KLIERVVSCIFRYRQKQV 77
K++E+VV F R+K +
Sbjct: 207 KILEKVVKAAFAQRRKTL 224
>gi|420145311|ref|ZP_14652781.1| Ribosomal RNA small subunit methyltransferase A [Lactobacillus
coryniformis subsp. coryniformis CECT 5711]
gi|398403087|gb|EJN56362.1| Ribosomal RNA small subunit methyltransferase A [Lactobacillus
coryniformis subsp. coryniformis CECT 5711]
Length = 296
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 59/131 (45%), Gaps = 3/131 (2%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVH-PIIDLPF 59
+ A G + LS+ Q V F +P F+P+P VD +V T V P +
Sbjct: 165 LAADPGSKAYGSLSVAVQYQMTVKLAFIVPKTVFVPQPNVDSAIVSLTRHVTPPAVATDE 224
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPK--RKRQLVVSLLERACVKPILRPYQLSVQEFG 117
K+ R+V F R+K ++ + L+ K + + +L + P +R +LSV +F
Sbjct: 225 KVFARLVRGSFAQRRKSLWNNLTALYGKDATTKAALTEVLAAEKIDPGIRGERLSVTDFV 284
Query: 118 QICLAYRDMCE 128
++ A D +
Sbjct: 285 RLANAISDHAK 295
>gi|417546796|ref|ZP_12197882.1| dimethyladenosine transferase [Acinetobacter baumannii OIFC032]
gi|421665337|ref|ZP_16105456.1| dimethyladenosine transferase [Acinetobacter baumannii OIFC087]
gi|421670325|ref|ZP_16110326.1| dimethyladenosine transferase [Acinetobacter baumannii OIFC099]
gi|400384684|gb|EJP43362.1| dimethyladenosine transferase [Acinetobacter baumannii OIFC032]
gi|410385621|gb|EKP38109.1| dimethyladenosine transferase [Acinetobacter baumannii OIFC099]
gi|410390487|gb|EKP42873.1| dimethyladenosine transferase [Acinetobacter baumannii OIFC087]
Length = 270
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 52/117 (44%), Gaps = 8/117 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPF 59
+ A ++ RLS+M Q +C F +P AF P P+V V P PI
Sbjct: 152 ITAEPNTKEYGRLSVMIQYYCQPTFLFEVPAGAFNPPPKVTSAVFRLVPYEQKPITAKDE 211
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
K + R+V+ +F R+K + K L E+A V P+ RP L++ EF
Sbjct: 212 KALARLVAHVFTQRRKTLRN-------SLKGMLAEDGFEKAGVDPMARPETLTLAEF 261
>gi|169634292|ref|YP_001708028.1| dimethyladenosine transferase [Acinetobacter baumannii SDF]
gi|169794673|ref|YP_001712466.1| dimethyladenosine transferase [Acinetobacter baumannii AYE]
gi|184159517|ref|YP_001847856.1| dimethyladenosine transferase [Acinetobacter baumannii ACICU]
gi|213157955|ref|YP_002320753.1| dimethyladenosine transferase [Acinetobacter baumannii AB0057]
gi|239504128|ref|ZP_04663438.1| dimethyladenosine transferase [Acinetobacter baumannii AB900]
gi|260558120|ref|ZP_05830330.1| dimethyladenosine transferase [Acinetobacter baumannii ATCC 19606 =
CIP 70.34]
gi|301345850|ref|ZP_07226591.1| dimethyladenosine transferase [Acinetobacter baumannii AB056]
gi|301512166|ref|ZP_07237403.1| dimethyladenosine transferase [Acinetobacter baumannii AB058]
gi|301595546|ref|ZP_07240554.1| dimethyladenosine transferase [Acinetobacter baumannii AB059]
gi|332851556|ref|ZP_08433533.1| dimethyladenosine transferase [Acinetobacter baumannii 6013150]
gi|332867755|ref|ZP_08437827.1| dimethyladenosine transferase [Acinetobacter baumannii 6013113]
gi|332873490|ref|ZP_08441441.1| dimethyladenosine transferase [Acinetobacter baumannii 6014059]
gi|384133209|ref|YP_005515821.1| dimethyladenosine transferase [Acinetobacter baumannii 1656-2]
gi|384144627|ref|YP_005527337.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase,
kasugamycin resistance [Acinetobacter baumannii
MDR-ZJ06]
gi|385238949|ref|YP_005800288.1| dimethyladenosine transferase [Acinetobacter baumannii TCDC-AB0715]
gi|387122564|ref|YP_006288446.1| dimethyladenosine transferase [Acinetobacter baumannii MDR-TJ]
gi|403675853|ref|ZP_10937960.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Acinetobacter sp. NCTC 10304]
gi|407934103|ref|YP_006849746.1| dimethyladenosine transferase [Acinetobacter baumannii TYTH-1]
gi|416150714|ref|ZP_11603455.1| dimethyladenosine transferase (rRNA methylation) [Acinetobacter
baumannii AB210]
gi|417555066|ref|ZP_12206135.1| dimethyladenosine transferase [Acinetobacter baumannii Naval-81]
gi|417561479|ref|ZP_12212358.1| dimethyladenosine transferase [Acinetobacter baumannii OIFC137]
gi|417570085|ref|ZP_12220942.1| dimethyladenosine transferase [Acinetobacter baumannii OIFC189]
gi|417572946|ref|ZP_12223800.1| dimethyladenosine transferase [Acinetobacter baumannii Canada BC-5]
gi|417576093|ref|ZP_12226938.1| dimethyladenosine transferase [Acinetobacter baumannii Naval-17]
gi|417870513|ref|ZP_12515473.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Acinetobacter baumannii ABNIH1]
gi|417876104|ref|ZP_12520896.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Acinetobacter baumannii ABNIH2]
gi|417877878|ref|ZP_12522537.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Acinetobacter baumannii ABNIH3]
gi|417884458|ref|ZP_12528656.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Acinetobacter baumannii ABNIH4]
gi|421199008|ref|ZP_15656173.1| dimethyladenosine transferase [Acinetobacter baumannii OIFC109]
gi|421204458|ref|ZP_15661583.1| dimethyladenosine transferase [Acinetobacter baumannii AC12]
gi|421455334|ref|ZP_15904678.1| dimethyladenosine transferase [Acinetobacter baumannii IS-123]
gi|421536625|ref|ZP_15982863.1| dimethyladenosine transferase [Acinetobacter baumannii AC30]
gi|421621460|ref|ZP_16062381.1| dimethyladenosine transferase [Acinetobacter baumannii OIFC074]
gi|421624722|ref|ZP_16065587.1| dimethyladenosine transferase [Acinetobacter baumannii OIFC098]
gi|421628590|ref|ZP_16069357.1| dimethyladenosine transferase [Acinetobacter baumannii OIFC180]
gi|421634856|ref|ZP_16075463.1| dimethyladenosine transferase [Acinetobacter baumannii Naval-13]
gi|421642274|ref|ZP_16082798.1| dimethyladenosine transferase [Acinetobacter baumannii IS-235]
gi|421646972|ref|ZP_16087410.1| dimethyladenosine transferase [Acinetobacter baumannii IS-251]
gi|421649652|ref|ZP_16090042.1| dimethyladenosine transferase [Acinetobacter baumannii OIFC0162]
gi|421654389|ref|ZP_16094718.1| dimethyladenosine transferase [Acinetobacter baumannii Naval-72]
gi|421660460|ref|ZP_16100651.1| dimethyladenosine transferase [Acinetobacter baumannii Naval-83]
gi|421673047|ref|ZP_16112993.1| dimethyladenosine transferase [Acinetobacter baumannii OIFC065]
gi|421678949|ref|ZP_16118830.1| dimethyladenosine transferase [Acinetobacter baumannii OIFC111]
gi|421689152|ref|ZP_16128837.1| dimethyladenosine transferase [Acinetobacter baumannii IS-143]
gi|421691321|ref|ZP_16130982.1| dimethyladenosine transferase [Acinetobacter baumannii IS-116]
gi|421697654|ref|ZP_16137203.1| dimethyladenosine transferase [Acinetobacter baumannii IS-58]
gi|421704777|ref|ZP_16144219.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Acinetobacter baumannii ZWS1122]
gi|421708555|ref|ZP_16147930.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Acinetobacter baumannii ZWS1219]
gi|421786928|ref|ZP_16223309.1| dimethyladenosine transferase [Acinetobacter baumannii Naval-82]
gi|421790542|ref|ZP_16226745.1| dimethyladenosine transferase [Acinetobacter baumannii Naval-2]
gi|421797644|ref|ZP_16233684.1| dimethyladenosine transferase [Acinetobacter baumannii Naval-21]
gi|421801133|ref|ZP_16237096.1| dimethyladenosine transferase [Acinetobacter baumannii Canada BC1]
gi|421805599|ref|ZP_16241477.1| dimethyladenosine transferase [Acinetobacter baumannii WC-A-694]
gi|421809762|ref|ZP_16245593.1| dimethyladenosine transferase [Acinetobacter baumannii OIFC035]
gi|424050941|ref|ZP_17788476.1| ribosomal RNA small subunit methyltransferase A [Acinetobacter
baumannii Ab11111]
gi|424058643|ref|ZP_17796137.1| ribosomal RNA small subunit methyltransferase A [Acinetobacter
baumannii Ab33333]
gi|424062107|ref|ZP_17799594.1| ribosomal RNA small subunit methyltransferase A [Acinetobacter
baumannii Ab44444]
gi|425747993|ref|ZP_18865985.1| dimethyladenosine transferase [Acinetobacter baumannii WC-348]
gi|425754704|ref|ZP_18872560.1| dimethyladenosine transferase [Acinetobacter baumannii Naval-113]
gi|445409047|ref|ZP_21432670.1| dimethyladenosine transferase [Acinetobacter baumannii Naval-57]
gi|445453055|ref|ZP_21445043.1| dimethyladenosine transferase [Acinetobacter baumannii WC-A-92]
gi|445457466|ref|ZP_21446533.1| dimethyladenosine transferase [Acinetobacter baumannii OIFC047]
gi|445472586|ref|ZP_21452603.1| dimethyladenosine transferase [Acinetobacter baumannii OIFC338]
gi|445481802|ref|ZP_21456178.1| dimethyladenosine transferase [Acinetobacter baumannii Naval-78]
gi|445488190|ref|ZP_21458130.1| dimethyladenosine transferase [Acinetobacter baumannii AA-014]
gi|169147600|emb|CAM85461.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase,
kasugamycin resistance [Acinetobacter baumannii AYE]
gi|169153084|emb|CAP02154.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase,
kasugamycin resistance [Acinetobacter baumannii]
gi|183211111|gb|ACC58509.1| Dimethyladenosine transferase (rRNA methylation) [Acinetobacter
baumannii ACICU]
gi|193078414|gb|ABO13399.2| S-adenosylmethionine-6-N'N'-adenosyl [Acinetobacter baumannii ATCC
17978]
gi|213057115|gb|ACJ42017.1| dimethyladenosine transferase [Acinetobacter baumannii AB0057]
gi|260408393|gb|EEX01701.1| dimethyladenosine transferase [Acinetobacter baumannii ATCC 19606 =
CIP 70.34]
gi|322509429|gb|ADX04883.1| dimethyladenosine transferase [Acinetobacter baumannii 1656-2]
gi|323519450|gb|ADX93831.1| dimethyladenosine transferase [Acinetobacter baumannii TCDC-AB0715]
gi|332729901|gb|EGJ61233.1| dimethyladenosine transferase [Acinetobacter baumannii 6013150]
gi|332733761|gb|EGJ64913.1| dimethyladenosine transferase [Acinetobacter baumannii 6013113]
gi|332738315|gb|EGJ69191.1| dimethyladenosine transferase [Acinetobacter baumannii 6014059]
gi|333363883|gb|EGK45897.1| dimethyladenosine transferase (rRNA methylation) [Acinetobacter
baumannii AB210]
gi|342224129|gb|EGT89188.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Acinetobacter baumannii ABNIH2]
gi|342227578|gb|EGT92499.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Acinetobacter baumannii ABNIH1]
gi|342234298|gb|EGT98964.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Acinetobacter baumannii ABNIH4]
gi|342234393|gb|EGT99053.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Acinetobacter baumannii ABNIH3]
gi|347595120|gb|AEP07841.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase,
kasugamycin resistance [Acinetobacter baumannii
MDR-ZJ06]
gi|385877056|gb|AFI94151.1| dimethyladenosine transferase [Acinetobacter baumannii MDR-TJ]
gi|395524061|gb|EJG12150.1| dimethyladenosine transferase [Acinetobacter baumannii OIFC137]
gi|395550533|gb|EJG16542.1| dimethyladenosine transferase [Acinetobacter baumannii OIFC189]
gi|395565904|gb|EJG27551.1| dimethyladenosine transferase [Acinetobacter baumannii OIFC109]
gi|395569314|gb|EJG29976.1| dimethyladenosine transferase [Acinetobacter baumannii Naval-17]
gi|398326046|gb|EJN42199.1| dimethyladenosine transferase [Acinetobacter baumannii AC12]
gi|400208514|gb|EJO39484.1| dimethyladenosine transferase [Acinetobacter baumannii Canada BC-5]
gi|400211572|gb|EJO42534.1| dimethyladenosine transferase [Acinetobacter baumannii IS-123]
gi|400391483|gb|EJP58530.1| dimethyladenosine transferase [Acinetobacter baumannii Naval-81]
gi|404558739|gb|EKA64017.1| dimethyladenosine transferase [Acinetobacter baumannii IS-143]
gi|404562711|gb|EKA67930.1| dimethyladenosine transferase [Acinetobacter baumannii IS-116]
gi|404573399|gb|EKA78434.1| dimethyladenosine transferase [Acinetobacter baumannii IS-58]
gi|404664842|gb|EKB32815.1| ribosomal RNA small subunit methyltransferase A [Acinetobacter
baumannii Ab33333]
gi|404666320|gb|EKB34268.1| ribosomal RNA small subunit methyltransferase A [Acinetobacter
baumannii Ab11111]
gi|404672412|gb|EKB40241.1| ribosomal RNA small subunit methyltransferase A [Acinetobacter
baumannii Ab44444]
gi|407189284|gb|EKE60511.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Acinetobacter baumannii ZWS1122]
gi|407189804|gb|EKE61027.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Acinetobacter baumannii ZWS1219]
gi|407902684|gb|AFU39515.1| dimethyladenosine transferase [Acinetobacter baumannii TYTH-1]
gi|408510972|gb|EKK12630.1| dimethyladenosine transferase [Acinetobacter baumannii Naval-72]
gi|408513353|gb|EKK14976.1| dimethyladenosine transferase [Acinetobacter baumannii OIFC0162]
gi|408513424|gb|EKK15043.1| dimethyladenosine transferase [Acinetobacter baumannii IS-235]
gi|408516994|gb|EKK18546.1| dimethyladenosine transferase [Acinetobacter baumannii IS-251]
gi|408698149|gb|EKL43645.1| dimethyladenosine transferase [Acinetobacter baumannii OIFC074]
gi|408700588|gb|EKL46037.1| dimethyladenosine transferase [Acinetobacter baumannii OIFC098]
gi|408703414|gb|EKL48810.1| dimethyladenosine transferase [Acinetobacter baumannii Naval-13]
gi|408704455|gb|EKL49823.1| dimethyladenosine transferase [Acinetobacter baumannii Naval-83]
gi|408705769|gb|EKL51100.1| dimethyladenosine transferase [Acinetobacter baumannii OIFC180]
gi|409985447|gb|EKO41662.1| dimethyladenosine transferase [Acinetobacter baumannii AC30]
gi|410387486|gb|EKP39939.1| dimethyladenosine transferase [Acinetobacter baumannii OIFC065]
gi|410391761|gb|EKP44126.1| dimethyladenosine transferase [Acinetobacter baumannii OIFC111]
gi|410396270|gb|EKP48543.1| dimethyladenosine transferase [Acinetobacter baumannii Naval-21]
gi|410405999|gb|EKP58029.1| dimethyladenosine transferase [Acinetobacter baumannii Naval-2]
gi|410406030|gb|EKP58059.1| dimethyladenosine transferase [Acinetobacter baumannii Canada BC1]
gi|410408203|gb|EKP60172.1| dimethyladenosine transferase [Acinetobacter baumannii WC-A-694]
gi|410410321|gb|EKP62232.1| dimethyladenosine transferase [Acinetobacter baumannii Naval-82]
gi|410413818|gb|EKP65630.1| dimethyladenosine transferase [Acinetobacter baumannii OIFC035]
gi|425492188|gb|EKU58456.1| dimethyladenosine transferase [Acinetobacter baumannii WC-348]
gi|425496405|gb|EKU62535.1| dimethyladenosine transferase [Acinetobacter baumannii Naval-113]
gi|444753873|gb|ELW78510.1| dimethyladenosine transferase [Acinetobacter baumannii WC-A-92]
gi|444767834|gb|ELW92069.1| dimethyladenosine transferase [Acinetobacter baumannii AA-014]
gi|444769980|gb|ELW94141.1| dimethyladenosine transferase [Acinetobacter baumannii OIFC338]
gi|444770017|gb|ELW94177.1| dimethyladenosine transferase [Acinetobacter baumannii Naval-78]
gi|444776377|gb|ELX00420.1| dimethyladenosine transferase [Acinetobacter baumannii OIFC047]
gi|444780634|gb|ELX04574.1| dimethyladenosine transferase [Acinetobacter baumannii Naval-57]
gi|452953699|gb|EME59115.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Acinetobacter baumannii MSP4-16]
Length = 270
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 8/117 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPF 59
+ A ++ RLS+M Q +C F +P AF P P+V V P PI
Sbjct: 152 ITAEPNTKEYGRLSVMIQYYCQPTFLFEVPAGAFNPPPKVTSAVFRLVPYEQKPITAKDE 211
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
K + R+V+ +F R+K + SL K L E+A V P+ RP L++ EF
Sbjct: 212 KALARLVAHVFTQRRKTLRN--SL-----KGMLAEDGFEKAGVDPMARPETLTLAEF 261
>gi|418018678|ref|ZP_12658234.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Streptococcus salivarius M18]
gi|345527527|gb|EGX30838.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Streptococcus salivarius M18]
Length = 290
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 3/113 (2%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ T R P++++ + + RV F
Sbjct: 172 LSIAVQYYMTAKVSFVVPRTVFVPAPNVDSAILKMTRREQPLVEVKDEDFLFRVAKASFV 231
Query: 72 YRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEFGQICLA 122
+R+K ++ + F K + + + LE A +KP +R LS+ +F + A
Sbjct: 232 HRRKTLWNNLTNHFGKSEEVKTKLEQALEIADIKPSIRGEALSISDFAHLSDA 284
>gi|209693971|ref|YP_002261899.1| dimethyladenosine transferase [Aliivibrio salmonicida LFI1238]
gi|226729749|sp|B6EL48.1|RSMA_ALISL RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|208007922|emb|CAQ78053.1| dimethyladenosine transferase [Aliivibrio salmonicida LFI1238]
Length = 277
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 8/117 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPF 59
+ A G + RL++M Q +C V +P AF+P P+VD VV P V P
Sbjct: 149 LAAGPGTKAYGRLTVMAQYYCKVMPVLEVPPTAFVPPPKVDSAVVRLVPYEVLPFPAKNL 208
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
K ++RV F R+K V L K + LE V P RP L++++F
Sbjct: 209 KWLDRVCREGFNQRRKTVRNCFKALLTKEQ-------LEALGVNPSHRPENLTLEQF 258
>gi|15888443|ref|NP_354124.1| rRNA-adenine N6,N6-dimethyltransferase [Agrobacterium fabrum str.
C58]
gi|335036623|ref|ZP_08529948.1| dimethyladenosine transferase [Agrobacterium sp. ATCC 31749]
gi|27151578|sp|Q8UGD5.1|RSMA_AGRT5 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|15156135|gb|AAK86909.1| rRNA-adenine N6,N6-dimethyltransferase [Agrobacterium fabrum str.
C58]
gi|333792006|gb|EGL63378.1| dimethyladenosine transferase [Agrobacterium sp. ATCC 31749]
Length = 276
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 57/119 (47%), Gaps = 14/119 (11%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDH-RFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF 59
++A EG RL ++ W V F +P +AF P P+V VVH P+ P LP
Sbjct: 162 IVAEEGDNHYGRLGVLA-GWRTVSEMAFDVPPQAFSPPPKVTSTVVHLLPKDKP---LPC 217
Query: 60 KL--IERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+ +ERV F R+K + + L + +LLE+A + P R LSV+EF
Sbjct: 218 DVAKLERVTEAAFGQRRKMLRQSVKSLGGE-------TLLEKAGIDPTRRAETLSVEEF 269
>gi|59710893|ref|YP_203669.1| dimethyladenosine transferase [Vibrio fischeri ES114]
gi|197334233|ref|YP_002155045.1| dimethyladenosine transferase [Vibrio fischeri MJ11]
gi|423685002|ref|ZP_17659810.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Vibrio fischeri SR5]
gi|62900449|sp|Q5E865.1|RSMA_VIBF1 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226732638|sp|B5FGG5.1|RSMA_VIBFM RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|59478994|gb|AAW84781.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Vibrio fischeri ES114]
gi|197315723|gb|ACH65170.1| dimethyladenosine transferase [Vibrio fischeri MJ11]
gi|371496049|gb|EHN71643.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Vibrio fischeri SR5]
Length = 272
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 53/117 (45%), Gaps = 8/117 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPF 59
+ A G + RL++M Q +C V +P AF+P P+VD VV P P
Sbjct: 149 LAAGPGTKAYGRLTVMAQYFCKVMPVLEVPPTAFVPPPKVDSAVVRLVPYETLPYPATNL 208
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
K ++RV F R+K V L K + LE + P +RP L++++F
Sbjct: 209 KWLDRVCREGFNQRRKTVRNCYKALLTKEQ-------LEELGINPSMRPENLTLEQF 258
>gi|339625306|ref|ZP_08661095.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Fructobacillus fructosus KCTC 3544]
Length = 295
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 64/126 (50%), Gaps = 4/126 (3%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPR-VHPIIDLPFKL 61
A G ++ L++M + +V +P KAF P P VD VV TP+ +D P +L
Sbjct: 166 AKPGTKEYGVLTVMLDYYASVAIALKVPAKAFNPSPNVDSAVVTLTPKPAEKPVDHPKQL 225
Query: 62 IERVVSCIFRYRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEFGQI 119
V +C F +R+K ++ F K + ++ + L+ A + P +R +L++ +F ++
Sbjct: 226 FSLVKAC-FAHRRKSLWNNLLQRFGKEEAVKEGLTQALQLAEIDPGIRAERLTLADFTRL 284
Query: 120 CLAYRD 125
A ++
Sbjct: 285 YEALKE 290
>gi|104773499|ref|YP_618479.1| dimethyladenosine transferase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|116513494|ref|YP_812400.1| dimethyladenosine transferase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|118600873|sp|Q1GBR1.1|RSMA_LACDA RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|122275736|sp|Q04C60.1|RSMA_LACDB RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|103422580|emb|CAI97183.1| Dimethyladenosine transferase (16S rRNA dimethylase) [Lactobacillus
delbrueckii subsp. bulgaricus ATCC 11842]
gi|116092809|gb|ABJ57962.1| dimethyladenosine transferase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
Length = 296
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 4/127 (3%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G + LSI Q +VD + +F+P+P+VD VV TP P K
Sbjct: 171 LAAQPGSKAYGPLSIAVQTQMSVDLALEVGHASFMPQPKVDSAVVVLTPLEKPADVGDRK 230
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFP-KRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
RVV F R+K + L P K R+ +++ L+ + P RP QL++ +F +I
Sbjct: 231 QFNRVVKLCFAQRRKTLANNLKTLLPDKEDREKLLADLD---LDPRQRPEQLAISDFIRI 287
Query: 120 CLAYRDM 126
A +M
Sbjct: 288 SQAIAEM 294
>gi|378578107|ref|ZP_09826787.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Pantoea stewartii subsp. stewartii DC283]
gi|377819216|gb|EHU02296.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Pantoea stewartii subsp. stewartii DC283]
Length = 273
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 12/132 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A G + RLS+M Q +C V +P AF P P+VD VV P + HP+ D+
Sbjct: 148 LVAGPGSKAYGRLSVMAQYYCQVIPVLEVPPHAFTPPPKVDSAVVRLVPFMTPPHPVKDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + S + LE + LR +SV ++
Sbjct: 208 --RILSRITTEAFGQRRKTLRNSLS-------HMVTAGALEDLSIDTGLRAENVSVAQYC 258
Query: 118 QICLAYRDMCEE 129
Q+ D ++
Sbjct: 259 QLANWLADHLDK 270
>gi|110834909|ref|YP_693768.1| ribosomal RNA adenine dimethylase [Alcanivorax borkumensis SK2]
gi|122064277|sp|Q0VMV2.1|RSMA_ALCBS RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|110648020|emb|CAL17496.1| Ribosomal RNA adenine dimethylase [Alcanivorax borkumensis SK2]
Length = 280
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 68/163 (41%), Gaps = 29/163 (17%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A+ G RLSIM Q C D+ F +P +AF P P+VD VV P HP D
Sbjct: 141 LTASPGTRDWGRLSIMVQYHCQADYLFFVPPEAFSPPPRVDSAVVRLIPHDSPPHPADDE 200
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+ ++V+ F R+K + K + + + LRP QLSV ++
Sbjct: 201 DH--LRKLVAQAFTQRRKAIRN-------GLKSWVSAEQFQAVGIDAGLRPDQLSVADY- 250
Query: 118 QICLAYRDMCEEMPGLYEYTLEDTPGDIE-PEAVAEQEGEGDE 159
+ LA + P D+E A ++G+GD
Sbjct: 251 -VALA--------------NISRPPADVEDANAPHTEQGKGDN 278
>gi|254452280|ref|ZP_05065717.1| dimethyladenosine transferase [Octadecabacter arcticus 238]
gi|198266686|gb|EDY90956.1| dimethyladenosine transferase [Octadecabacter arcticus 238]
Length = 279
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 5/116 (4%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G + RL+I+CQ + +P +AF P P+V VVH T P
Sbjct: 159 ITAAPGSKAYGRLAILCQWRTDAQIVMNLPPEAFSPPPKVSSAVVHLTALAEPRFPADAN 218
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+++ + + F R+K + L P + L+ A +KP R Q+ V+ F
Sbjct: 219 MLQHITATAFNQRRKMLRSSLKGLSPDIEDHLIA-----ANIKPTDRAEQIDVERF 269
>gi|406027425|ref|YP_006726257.1| dimethyladenosine transferase [Lactobacillus buchneri CD034]
gi|405125914|gb|AFS00675.1| dimethyladenosine transferase [Lactobacillus buchneri CD034]
Length = 296
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 7/119 (5%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF---KLIERVVSCI 69
LS++ Q V+ F +P AFIP+P+VD +V TPRV ++ PF I V C
Sbjct: 176 LSVIVQELNQVEISFVVPKTAFIPQPKVDSAIVKLTPRVKRAVE-PFDQKAFISFVRGC- 233
Query: 70 FRYRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEFGQICLAYRDM 126
F +++K ++ +F K + + +L + +RP L+V +F + A+ +
Sbjct: 234 FMHQRKTLWNNLQGIFGKTPEVKANIKEVLASVNIDAGVRPENLTVDQFVTLANAFHTL 292
>gi|237756245|ref|ZP_04584806.1| dimethyladenosine transferase [Sulfurihydrogenibium yellowstonense
SS-5]
gi|237691603|gb|EEP60650.1| dimethyladenosine transferase [Sulfurihydrogenibium yellowstonense
SS-5]
Length = 258
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+IA + LS+ Q + +V + ++P + F P P+V VV TP+ + +I+ K
Sbjct: 143 LIAKPKTKDYTFLSVFIQTFFDVKYIMSVPARFFNPPPKVTSAVVKLTPKQNIVIN-NVK 201
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
+ VS +F+ R+K + K ++ +L +A V P LR +LSV++F +I
Sbjct: 202 KYKNFVSHLFQNRRKMI-----------KSKIEEGMLNKAGVSPNLRAEELSVEDFIRI 249
>gi|429108214|ref|ZP_19170083.1| Dimethyladenosine transferase [Cronobacter malonaticus 681]
gi|426294937|emb|CCJ96196.1| Dimethyladenosine transferase [Cronobacter malonaticus 681]
Length = 273
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +C V +P AF P P+VD VV P HP+ +L
Sbjct: 148 LVAGPNSKAYGRLSVMAQYFCQVIPVLEVPPTAFTPPPKVDSAVVRLVPHATPPHPVKEL 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+L+ R+ + F R+K + +F +L + P +R +SV ++
Sbjct: 208 --RLLSRLTTEAFNQRRKTIRNSLGNVFSPE-------ILTSLGIDPAMRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QMA 261
>gi|390436800|ref|ZP_10225338.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pantoea agglomerans IG1]
Length = 273
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A G + RL++M Q +C + +P +F P P+VD VV P +P+ D+
Sbjct: 148 LVAGPGNKTYGRLTVMAQYYCQIIPVLEVPPHSFTPPPKVDSAVVRLVPYAEPPYPVSDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + S + + LE + P LR +SV ++
Sbjct: 208 --RILSRITTEAFGQRRKTLRNSLS-------QMVAAGALEELSIDPTLRAENVSVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QLA 261
>gi|257880094|ref|ZP_05659747.1| dimethyladenosine transferase [Enterococcus faecium 1,230,933]
gi|257882326|ref|ZP_05661979.1| dimethyladenosine transferase [Enterococcus faecium 1,231,502]
gi|257885523|ref|ZP_05665176.1| dimethyladenosine transferase [Enterococcus faecium 1,231,501]
gi|257891185|ref|ZP_05670838.1| dimethyladenosine transferase [Enterococcus faecium 1,231,410]
gi|260560297|ref|ZP_05832473.1| dimethyladenosine transferase [Enterococcus faecium C68]
gi|293563099|ref|ZP_06677565.1| dimethyladenosine transferase [Enterococcus faecium E1162]
gi|293567525|ref|ZP_06678870.1| dimethyladenosine transferase [Enterococcus faecium E1071]
gi|294623379|ref|ZP_06702238.1| dimethyladenosine transferase [Enterococcus faecium U0317]
gi|314940231|ref|ZP_07847404.1| dimethyladenosine transferase [Enterococcus faecium TX0133a04]
gi|314941710|ref|ZP_07848589.1| dimethyladenosine transferase [Enterococcus faecium TX0133C]
gi|314947646|ref|ZP_07851055.1| dimethyladenosine transferase [Enterococcus faecium TX0082]
gi|314950632|ref|ZP_07853712.1| dimethyladenosine transferase [Enterococcus faecium TX0133A]
gi|314992501|ref|ZP_07857922.1| dimethyladenosine transferase [Enterococcus faecium TX0133B]
gi|314996345|ref|ZP_07861398.1| dimethyladenosine transferase [Enterococcus faecium TX0133a01]
gi|383329585|ref|YP_005355469.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium Aus0004]
gi|389869436|ref|YP_006376859.1| dimethyladenosine transferase [Enterococcus faecium DO]
gi|406579751|ref|ZP_11054979.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Enterococcus sp. GMD4E]
gi|406582031|ref|ZP_11057164.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Enterococcus sp. GMD3E]
gi|406584156|ref|ZP_11059192.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Enterococcus sp. GMD2E]
gi|406589636|ref|ZP_11064066.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Enterococcus sp. GMD1E]
gi|410936181|ref|ZP_11368050.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Enterococcus sp. GMD5E]
gi|415899786|ref|ZP_11551688.1| dimethyladenosine transferase [Enterococcus faecium E4453]
gi|416129473|ref|ZP_11597315.1| dimethyladenosine transferase [Enterococcus faecium E4452]
gi|424792638|ref|ZP_18218851.1| dimethyladenosine transferase [Enterococcus faecium V689]
gi|424797797|ref|ZP_18223349.1| dimethyladenosine transferase [Enterococcus faecium S447]
gi|424826317|ref|ZP_18251227.1| dimethyladenosine transferase [Enterococcus faecium R501]
gi|424857847|ref|ZP_18281931.1| dimethyladenosine transferase [Enterococcus faecium R499]
gi|424868584|ref|ZP_18292326.1| dimethyladenosine transferase [Enterococcus faecium R497]
gi|424950886|ref|ZP_18366027.1| dimethyladenosine transferase [Enterococcus faecium R496]
gi|424955329|ref|ZP_18370171.1| dimethyladenosine transferase [Enterococcus faecium R494]
gi|424958791|ref|ZP_18373416.1| dimethyladenosine transferase [Enterococcus faecium R446]
gi|424961240|ref|ZP_18375695.1| dimethyladenosine transferase [Enterococcus faecium P1986]
gi|424964841|ref|ZP_18378903.1| dimethyladenosine transferase [Enterococcus faecium P1190]
gi|424967192|ref|ZP_18380900.1| dimethyladenosine transferase [Enterococcus faecium P1140]
gi|424971619|ref|ZP_18385046.1| dimethyladenosine transferase [Enterococcus faecium P1139]
gi|424973772|ref|ZP_18387037.1| dimethyladenosine transferase [Enterococcus faecium P1137]
gi|424977210|ref|ZP_18390242.1| dimethyladenosine transferase [Enterococcus faecium P1123]
gi|424981331|ref|ZP_18394067.1| dimethyladenosine transferase [Enterococcus faecium ERV99]
gi|424984071|ref|ZP_18396623.1| dimethyladenosine transferase [Enterococcus faecium ERV69]
gi|424989491|ref|ZP_18401755.1| dimethyladenosine transferase [Enterococcus faecium ERV38]
gi|424991190|ref|ZP_18403358.1| dimethyladenosine transferase [Enterococcus faecium ERV26]
gi|424994634|ref|ZP_18406565.1| dimethyladenosine transferase [Enterococcus faecium ERV168]
gi|424999349|ref|ZP_18410976.1| dimethyladenosine transferase [Enterococcus faecium ERV165]
gi|425000618|ref|ZP_18412174.1| dimethyladenosine transferase [Enterococcus faecium ERV161]
gi|425005034|ref|ZP_18416312.1| dimethyladenosine transferase [Enterococcus faecium ERV102]
gi|425008612|ref|ZP_18419682.1| dimethyladenosine transferase [Enterococcus faecium ERV1]
gi|425011953|ref|ZP_18422810.1| dimethyladenosine transferase [Enterococcus faecium E422]
gi|425013454|ref|ZP_18424184.1| dimethyladenosine transferase [Enterococcus faecium E417]
gi|425017052|ref|ZP_18427588.1| dimethyladenosine transferase [Enterococcus faecium C621]
gi|425020708|ref|ZP_18431003.1| dimethyladenosine transferase [Enterococcus faecium C497]
gi|425023743|ref|ZP_18433844.1| dimethyladenosine transferase [Enterococcus faecium C1904]
gi|425032859|ref|ZP_18437868.1| dimethyladenosine transferase [Enterococcus faecium 515]
gi|425035079|ref|ZP_18439931.1| dimethyladenosine transferase [Enterococcus faecium 514]
gi|425038908|ref|ZP_18443486.1| dimethyladenosine transferase [Enterococcus faecium 513]
gi|425042389|ref|ZP_18446729.1| dimethyladenosine transferase [Enterococcus faecium 511]
gi|425045798|ref|ZP_18449867.1| dimethyladenosine transferase [Enterococcus faecium 510]
gi|425049049|ref|ZP_18452925.1| dimethyladenosine transferase [Enterococcus faecium 509]
gi|425053266|ref|ZP_18456819.1| dimethyladenosine transferase [Enterococcus faecium 506]
gi|425061909|ref|ZP_18465104.1| dimethyladenosine transferase [Enterococcus faecium 503]
gi|427395584|ref|ZP_18888506.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
durans FB129-CNAB-4]
gi|430823892|ref|ZP_19442461.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E0120]
gi|430832227|ref|ZP_19450274.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E0333]
gi|430845022|ref|ZP_19462918.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E1050]
gi|430847357|ref|ZP_19465196.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E1133]
gi|430856532|ref|ZP_19474218.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E1392]
gi|430863763|ref|ZP_19480208.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E1573]
gi|430866973|ref|ZP_19482199.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E1574]
gi|430962011|ref|ZP_19487294.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E1576]
gi|431012223|ref|ZP_19490014.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E1578]
gi|431238538|ref|ZP_19503407.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E1622]
gi|431260006|ref|ZP_19505512.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E1623]
gi|431381582|ref|ZP_19511184.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E1627]
gi|431517039|ref|ZP_19516429.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E1634]
gi|431550005|ref|ZP_19519318.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E1731]
gi|431744653|ref|ZP_19533521.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E2071]
gi|431749707|ref|ZP_19538444.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E2297]
gi|431755639|ref|ZP_19544288.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E2883]
gi|431771385|ref|ZP_19559769.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E1644]
gi|431774182|ref|ZP_19562494.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E2369]
gi|431777305|ref|ZP_19565559.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E2560]
gi|431780009|ref|ZP_19568198.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E4389]
gi|431783088|ref|ZP_19571212.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E6012]
gi|431786549|ref|ZP_19574561.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E6045]
gi|447913526|ref|YP_007394938.1| Dimethyladenosine transferase [Enterococcus faecium NRRL B-2354]
gi|257814322|gb|EEV43080.1| dimethyladenosine transferase [Enterococcus faecium 1,230,933]
gi|257817984|gb|EEV45312.1| dimethyladenosine transferase [Enterococcus faecium 1,231,502]
gi|257821379|gb|EEV48509.1| dimethyladenosine transferase [Enterococcus faecium 1,231,501]
gi|257827545|gb|EEV54171.1| dimethyladenosine transferase [Enterococcus faecium 1,231,410]
gi|260073642|gb|EEW61968.1| dimethyladenosine transferase [Enterococcus faecium C68]
gi|291589768|gb|EFF21571.1| dimethyladenosine transferase [Enterococcus faecium E1071]
gi|291597226|gb|EFF28418.1| dimethyladenosine transferase [Enterococcus faecium U0317]
gi|291605013|gb|EFF34481.1| dimethyladenosine transferase [Enterococcus faecium E1162]
gi|313589488|gb|EFR68333.1| dimethyladenosine transferase [Enterococcus faecium TX0133a01]
gi|313592961|gb|EFR71806.1| dimethyladenosine transferase [Enterococcus faecium TX0133B]
gi|313597179|gb|EFR76024.1| dimethyladenosine transferase [Enterococcus faecium TX0133A]
gi|313599482|gb|EFR78325.1| dimethyladenosine transferase [Enterococcus faecium TX0133C]
gi|313640551|gb|EFS05131.1| dimethyladenosine transferase [Enterococcus faecium TX0133a04]
gi|313645887|gb|EFS10467.1| dimethyladenosine transferase [Enterococcus faecium TX0082]
gi|364089195|gb|EHM31908.1| dimethyladenosine transferase [Enterococcus faecium E4453]
gi|364094366|gb|EHM36551.1| dimethyladenosine transferase [Enterococcus faecium E4452]
gi|378939279|gb|AFC64351.1| Ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium Aus0004]
gi|388534685|gb|AFK59877.1| dimethyladenosine transferase [Enterococcus faecium DO]
gi|402917354|gb|EJX38145.1| dimethyladenosine transferase [Enterococcus faecium V689]
gi|402920262|gb|EJX40788.1| dimethyladenosine transferase [Enterococcus faecium S447]
gi|402924475|gb|EJX44684.1| dimethyladenosine transferase [Enterococcus faecium R501]
gi|402927843|gb|EJX47767.1| dimethyladenosine transferase [Enterococcus faecium R499]
gi|402932118|gb|EJX51651.1| dimethyladenosine transferase [Enterococcus faecium R496]
gi|402934396|gb|EJX53752.1| dimethyladenosine transferase [Enterococcus faecium R494]
gi|402936705|gb|EJX55865.1| dimethyladenosine transferase [Enterococcus faecium R497]
gi|402938941|gb|EJX57903.1| dimethyladenosine transferase [Enterococcus faecium R446]
gi|402944288|gb|EJX62713.1| dimethyladenosine transferase [Enterococcus faecium P1986]
gi|402945546|gb|EJX63886.1| dimethyladenosine transferase [Enterococcus faecium P1190]
gi|402954856|gb|EJX72438.1| dimethyladenosine transferase [Enterococcus faecium P1140]
gi|402957957|gb|EJX75314.1| dimethyladenosine transferase [Enterococcus faecium P1137]
gi|402958570|gb|EJX75877.1| dimethyladenosine transferase [Enterococcus faecium P1139]
gi|402963924|gb|EJX80761.1| dimethyladenosine transferase [Enterococcus faecium ERV99]
gi|402966725|gb|EJX83338.1| dimethyladenosine transferase [Enterococcus faecium P1123]
gi|402968605|gb|EJX85077.1| dimethyladenosine transferase [Enterococcus faecium ERV38]
gi|402969844|gb|EJX86225.1| dimethyladenosine transferase [Enterococcus faecium ERV69]
gi|402977472|gb|EJX93287.1| dimethyladenosine transferase [Enterococcus faecium ERV26]
gi|402979288|gb|EJX94964.1| dimethyladenosine transferase [Enterococcus faecium ERV165]
gi|402979501|gb|EJX95164.1| dimethyladenosine transferase [Enterococcus faecium ERV168]
gi|402987776|gb|EJY02819.1| dimethyladenosine transferase [Enterococcus faecium ERV102]
gi|402988811|gb|EJY03786.1| dimethyladenosine transferase [Enterococcus faecium ERV161]
gi|402992058|gb|EJY06791.1| dimethyladenosine transferase [Enterococcus faecium ERV1]
gi|402995063|gb|EJY09547.1| dimethyladenosine transferase [Enterococcus faecium E422]
gi|403001043|gb|EJY15124.1| dimethyladenosine transferase [Enterococcus faecium E417]
gi|403005692|gb|EJY19382.1| dimethyladenosine transferase [Enterococcus faecium C621]
gi|403008655|gb|EJY22149.1| dimethyladenosine transferase [Enterococcus faecium C497]
gi|403008889|gb|EJY22371.1| dimethyladenosine transferase [Enterococcus faecium C1904]
gi|403011746|gb|EJY25034.1| dimethyladenosine transferase [Enterococcus faecium 515]
gi|403018106|gb|EJY30813.1| dimethyladenosine transferase [Enterococcus faecium 513]
gi|403018875|gb|EJY31528.1| dimethyladenosine transferase [Enterococcus faecium 514]
gi|403023651|gb|EJY35889.1| dimethyladenosine transferase [Enterococcus faecium 511]
gi|403026237|gb|EJY38238.1| dimethyladenosine transferase [Enterococcus faecium 510]
gi|403029182|gb|EJY40952.1| dimethyladenosine transferase [Enterococcus faecium 509]
gi|403030971|gb|EJY42622.1| dimethyladenosine transferase [Enterococcus faecium 506]
gi|403040190|gb|EJY51286.1| dimethyladenosine transferase [Enterococcus faecium 503]
gi|404455082|gb|EKA01951.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Enterococcus sp. GMD4E]
gi|404458693|gb|EKA05101.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Enterococcus sp. GMD3E]
gi|404464549|gb|EKA10077.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Enterococcus sp. GMD2E]
gi|404470539|gb|EKA15164.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Enterococcus sp. GMD1E]
gi|410735422|gb|EKQ77334.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Enterococcus sp. GMD5E]
gi|425723573|gb|EKU86460.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
durans FB129-CNAB-4]
gi|430441925|gb|ELA51996.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E0120]
gi|430480218|gb|ELA57406.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E0333]
gi|430495856|gb|ELA71976.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E1050]
gi|430537300|gb|ELA77644.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E1133]
gi|430544292|gb|ELA84330.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E1392]
gi|430547823|gb|ELA87737.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E1573]
gi|430551023|gb|ELA90793.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E1574]
gi|430555921|gb|ELA95449.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E1576]
gi|430559734|gb|ELA99058.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E1578]
gi|430572239|gb|ELB11101.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E1622]
gi|430576745|gb|ELB15370.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E1623]
gi|430581944|gb|ELB20382.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E1627]
gi|430585593|gb|ELB23872.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E1634]
gi|430590693|gb|ELB28747.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E1731]
gi|430605396|gb|ELB42801.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E2071]
gi|430611294|gb|ELB48396.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E2297]
gi|430616861|gb|ELB53756.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E2883]
gi|430633449|gb|ELB69615.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E1644]
gi|430634584|gb|ELB70702.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E2369]
gi|430639417|gb|ELB75290.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E2560]
gi|430641090|gb|ELB76910.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E4389]
gi|430645442|gb|ELB80957.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E6045]
gi|430646110|gb|ELB81605.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E6012]
gi|445189235|gb|AGE30877.1| Dimethyladenosine transferase [Enterococcus faecium NRRL B-2354]
Length = 294
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 57/128 (44%), Gaps = 6/128 (4%)
Query: 6 GMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF-KLIER 64
G + LSI Q + F +P F+P+P VD ++ T R P +++ K R
Sbjct: 169 GTKAYGSLSIAVQYYMEASLAFIVPKTVFVPQPNVDSAILKLTRRDIPAVEVTDEKAFFR 228
Query: 65 VVSCIFRYRQKQVYKPASLLFPK--RKRQLVVSLLERACVKPILRPYQLSVQEFGQICLA 122
+ F+ R+K ++ + K + + + LE A + P R LS+QEF + A
Sbjct: 229 LTKAAFQQRRKTLWNNLQHSYGKDDQTKAWLAKSLETAGIDPKRRGETLSLQEFAALSNA 288
Query: 123 YRDMCEEM 130
M E M
Sbjct: 289 ---MSENM 293
>gi|448240483|ref|YP_007404536.1| 16S rRNA dimethyladenosine transferase, SAM-dependent [Serratia
marcescens WW4]
gi|445210847|gb|AGE16517.1| 16S rRNA dimethyladenosine transferase, SAM-dependent [Serratia
marcescens WW4]
gi|453064755|gb|EMF05719.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Serratia marcescens VGH107]
Length = 272
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RL++M Q +CNV +P AF P P+VD VV P +P+ D+
Sbjct: 148 LVAGPNSKAYGRLTVMAQYYCNVIPVLEVPPTAFAPPPKVDSAVVRLVPHTELPNPVGDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF + L V P LR +SV ++
Sbjct: 208 --RMLSRITTQAFNQRRKTIRNSLGDLFTPEQ-------LTELGVDPSLRAENISVAQYC 258
Query: 118 QIC 120
++
Sbjct: 259 KLA 261
>gi|329117503|ref|ZP_08246220.1| dimethyladenosine transferase [Streptococcus parauberis NCFD 2020]
gi|333905922|ref|YP_004479793.1| dimethyladenosine transferase [Streptococcus parauberis KCTC 11537]
gi|326907908|gb|EGE54822.1| dimethyladenosine transferase [Streptococcus parauberis NCFD 2020]
gi|333121187|gb|AEF26121.1| dimethyladenosine transferase [Streptococcus parauberis KCTC 11537]
Length = 290
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 60/117 (51%), Gaps = 3/117 (2%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIFR 71
LSI Q + + F +P F+P P VD ++ T R P++ + + + RV F
Sbjct: 172 LSIAVQYYMDAKVAFIVPRTVFVPAPNVDSAILKMTRRDQPLVAVQDEDFLFRVSKASFV 231
Query: 72 YRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEFGQICLAYRDM 126
+R+K ++ + F K + + + LE + + P +R LS+++FG++ A +++
Sbjct: 232 HRRKTLWNNLTSHFGKTEEIKANLTKALEISEISPSIRGEALSIEQFGKLADALKEV 288
>gi|431309298|ref|ZP_19508679.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E1626]
gi|431745300|ref|ZP_19534149.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E2134]
gi|431768200|ref|ZP_19556640.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E1321]
gi|430579227|gb|ELB17750.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E1626]
gi|430610736|gb|ELB47867.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E2134]
gi|430629584|gb|ELB65980.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E1321]
Length = 294
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 57/128 (44%), Gaps = 6/128 (4%)
Query: 6 GMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF-KLIER 64
G + LSI Q + F +P F+P+P VD ++ T R P +++ K R
Sbjct: 169 GTKAYGSLSIAVQYYMEASLAFIVPKTVFVPQPNVDSAILKLTRRDIPAVEVTDEKAFFR 228
Query: 65 VVSCIFRYRQKQVYKPASLLFPK--RKRQLVVSLLERACVKPILRPYQLSVQEFGQICLA 122
+ F+ R+K ++ + K + + + LE A + P R LS+QEF + A
Sbjct: 229 LTKAAFQQRRKTLWNNLQHSYGKDDQTKAWLAKSLETAGIDPKRRGETLSLQEFAALSNA 288
Query: 123 YRDMCEEM 130
M E M
Sbjct: 289 ---MSENM 293
>gi|424874623|ref|ZP_18298285.1| dimethyladenosine transferase [Rhizobium leguminosarum bv. viciae
WSM1455]
gi|393170324|gb|EJC70371.1| dimethyladenosine transferase [Rhizobium leguminosarum bv. viciae
WSM1455]
Length = 275
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 54/116 (46%), Gaps = 8/116 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A E + RL ++C F +P +AF P P+V VV TPR +P I
Sbjct: 161 IVANEDDDHYGRLGVLCGWRTEARMAFDVPPQAFTPPPKVTSTVVQLTPRENP-IPCAVG 219
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+E+V F R+K + + L + SLL +A + P R LSV+EF
Sbjct: 220 NLEKVTQAAFGQRRKMLRQSLKPLGGE-------SLLVKAGIDPARRAETLSVEEF 268
>gi|431452570|ref|ZP_19514076.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E1630]
gi|431760765|ref|ZP_19549359.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E3346]
gi|430585031|gb|ELB23336.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E1630]
gi|430623435|gb|ELB60127.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E3346]
Length = 294
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 57/128 (44%), Gaps = 6/128 (4%)
Query: 6 GMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF-KLIER 64
G + LSI Q + F +P F+P+P VD ++ T R P +++ K R
Sbjct: 169 GTKAYGSLSIAVQYYMEASLAFIVPKTVFVPQPNVDSAILKLTRRDIPAVEVTDEKAFFR 228
Query: 65 VVSCIFRYRQKQVYKPASLLFPK--RKRQLVVSLLERACVKPILRPYQLSVQEFGQICLA 122
+ F+ R+K ++ + K + + + LE A + P R LS+QEF + A
Sbjct: 229 LTKAAFQQRRKTLWNNLQHSYGKDDQTKAWLAKSLETAGIDPKRRGETLSLQEFAALSNA 288
Query: 123 YRDMCEEM 130
M E M
Sbjct: 289 ---MSENM 293
>gi|262371641|ref|ZP_06064920.1| dimethyladenosine transferase [Acinetobacter junii SH205]
gi|262311666|gb|EEY92751.1| dimethyladenosine transferase [Acinetobacter junii SH205]
Length = 270
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 52/117 (44%), Gaps = 8/117 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPF 59
+ A ++ RLS+M Q +C F +P +F P P+V V P PII
Sbjct: 152 ITAEPNTKEYGRLSVMIQYYCKPTFLFEVPPGSFNPPPKVTSAVFRLEPYETKPIIAKNE 211
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
K + R+V +F R+K + K L E+A V P+ RP LS+ +F
Sbjct: 212 KALARLVGHVFTQRRKTLRN-------SLKGMLAEDGFEKAGVDPMARPETLSLADF 261
>gi|421453233|ref|ZP_15902589.1| Dimethyladenosine transferase [Streptococcus salivarius K12]
gi|400181542|gb|EJO15809.1| Dimethyladenosine transferase [Streptococcus salivarius K12]
Length = 290
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 3/113 (2%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ T R P++++ + + RV F
Sbjct: 172 LSIAVQYYMTAKVAFVVPRTVFVPAPNVDSAILKMTRREQPLVEVKDEDFLFRVAKASFV 231
Query: 72 YRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEFGQICLA 122
+R+K ++ + F K + + + LE A +KP +R LS+ +F + A
Sbjct: 232 HRRKTLWNNLTNHFGKSEEVKTKLEQALEIADIKPSIRGEALSISDFAHLSDA 284
>gi|392947700|ref|ZP_10313332.1| Dimethyladenosine transferase [Lactobacillus pentosus KCA1]
gi|392437111|gb|EIW15003.1| Dimethyladenosine transferase [Lactobacillus pentosus KCA1]
Length = 295
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 59/136 (43%), Gaps = 15/136 (11%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFT---PRVHPIIDL 57
+ A G + L+I Q + +P F+P P VD +V T PR H L
Sbjct: 164 LAAEPGTKAYGALTIAVQYRMAAEMAMVVPRTVFVPAPNVDSAIVKLTALPPRTH----L 219
Query: 58 PF--KLIERVVSCIFRYRQKQVYKPASLLFPKR--KRQLVVSLLERACVKPILRPYQLSV 113
PF +VV F +R+K ++ LF K+ + + LE A + P +R +L+V
Sbjct: 220 PFDEAAFFKVVKAGFAHRRKNLWNNLQSLFGKQPDTKAAIQQALEIAAIDPKIRAERLTV 279
Query: 114 QEFGQICLAYRDMCEE 129
EF + D C +
Sbjct: 280 DEF----ITLTDACHQ 291
>gi|422007731|ref|ZP_16354717.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Providencia rettgeri Dmel1]
gi|414097621|gb|EKT59276.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Providencia rettgeri Dmel1]
Length = 269
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 6/104 (5%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A G + RLS+M Q +CNV +P AF P P+VD +V P +P+ D+
Sbjct: 148 LVAGPGSKAFGRLSVMAQYYCNVVPVLEVPPTAFTPAPKVDSAIVRLIPHRENPYPVKDI 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRK-RQLVVSLLERA 100
K + R+ + F R+K V LF + +L + L RA
Sbjct: 208 --KFLSRITTQAFNQRRKTVRNSLGDLFSVEELTELGIDLSTRA 249
>gi|422348721|ref|ZP_16429613.1| dimethyladenosine transferase [Sutterella wadsworthensis
2_1_59BFAA]
gi|404659065|gb|EKB31926.1| dimethyladenosine transferase [Sutterella wadsworthensis
2_1_59BFAA]
Length = 271
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 57/123 (46%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLP-- 58
M+A G + RLS+M Q + F +P AF+P P+V +V PR P+ LP
Sbjct: 145 MVAEPGSKTYGRLSVMLQYRYVMHKLFDVPPGAFVPPPKVTSSIVRMVPR--PVESLPEV 202
Query: 59 -FKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
++ +VV+ F+ R+K + S L + ++RA V P R L V F
Sbjct: 203 DMEIFSQVVALAFQQRRKTLRNALSTLMDD-------AAIKRAGVNPAARAETLDVAAFV 255
Query: 118 QIC 120
++
Sbjct: 256 RLA 258
>gi|422845053|ref|ZP_16891763.1| dimethyladenosine transferase [Lactobacillus delbrueckii subsp.
lactis DSM 20072]
gi|325684673|gb|EGD26827.1| dimethyladenosine transferase [Lactobacillus delbrueckii subsp.
lactis DSM 20072]
Length = 296
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 61/129 (47%), Gaps = 4/129 (3%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G + LSI Q +VD + +F+P+P+VD VV TP P K
Sbjct: 171 LAAQPGSKAYGPLSIAVQTQMSVDLALEVGHASFMPQPKVDSAVVVLTPLEKPADVGDRK 230
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFP-KRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
RVV F R+K + L P K R+ +++ L+ + P RP QL++ +F +I
Sbjct: 231 QFNRVVKLCFAQRRKTLANNLKTLLPDKEDREKLLADLD---LGPRQRPEQLAISDFIRI 287
Query: 120 CLAYRDMCE 128
A +M +
Sbjct: 288 SQAIAEMNK 296
>gi|425055499|ref|ZP_18458973.1| dimethyladenosine transferase [Enterococcus faecium 505]
gi|403033931|gb|EJY45414.1| dimethyladenosine transferase [Enterococcus faecium 505]
Length = 294
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 3/120 (2%)
Query: 6 GMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF-KLIER 64
G + LSI Q + F +P F+P+P VD ++ T R P +++ K R
Sbjct: 169 GTKAYGSLSIAVQYYMEASLAFIVPKTVFVPQPNVDSAILKLTRRDTPAVEVTDEKAFFR 228
Query: 65 VVSCIFRYRQKQVYKPASLLFPK--RKRQLVVSLLERACVKPILRPYQLSVQEFGQICLA 122
+ F+ R+K ++ + K + + + LE A + P R LS+QEF + A
Sbjct: 229 LTKAAFQQRRKTLWNNLQHSYGKDDQSKAWLAKSLETAGIDPKRRGETLSLQEFAALSNA 288
>gi|313889811|ref|ZP_07823453.1| dimethyladenosine transferase [Streptococcus pseudoporcinus SPIN
20026]
gi|416852671|ref|ZP_11909816.1| dimethyladenosine transferase [Streptococcus pseudoporcinus LQ
940-04]
gi|313121856|gb|EFR44953.1| dimethyladenosine transferase [Streptococcus pseudoporcinus SPIN
20026]
gi|356740160|gb|EHI65392.1| dimethyladenosine transferase [Streptococcus pseudoporcinus LQ
940-04]
Length = 290
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 58/117 (49%), Gaps = 3/117 (2%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ RV P+I + + RV F
Sbjct: 172 LSIAVQYYMAAKVSFIVPRTVFVPAPNVDSAILKMERRVEPLIKVQDEDFFFRVAKVGFI 231
Query: 72 YRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEFGQICLAYRDM 126
+R+K ++ + F K + ++ + LE A +K +R L+++EFG++ A + +
Sbjct: 232 HRRKTLWNNLTSHFGKSEETKKKLEEALELAGIKANIRGEALTIEEFGKLADALKSV 288
>gi|304396533|ref|ZP_07378414.1| dimethyladenosine transferase [Pantoea sp. aB]
gi|372275972|ref|ZP_09512008.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pantoea sp. SL1_M5]
gi|440760772|ref|ZP_20939875.1| Dimethyladenosine transferase [Pantoea agglomerans 299R]
gi|304356042|gb|EFM20408.1| dimethyladenosine transferase [Pantoea sp. aB]
gi|436425525|gb|ELP23259.1| Dimethyladenosine transferase [Pantoea agglomerans 299R]
Length = 273
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A G + RL++M Q +C + +P +F P P+VD VV P +P+ D+
Sbjct: 148 LVAGPGNKTYGRLTVMAQYYCQIIPVLEVPPHSFTPPPKVDSAVVRLVPYAEPPYPVSDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + S + + LE + P LR +SV ++
Sbjct: 208 --RILSRITTEAFGQRRKTLRNSLSHM-------VAAGALEELSIDPTLRAENVSVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QLA 261
>gi|297582384|ref|YP_003698164.1| dimethyladenosine transferase [Bacillus selenitireducens MLS10]
gi|297140841|gb|ADH97598.1| dimethyladenosine transferase [Bacillus selenitireducens MLS10]
Length = 298
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 54/123 (43%), Gaps = 2/123 (1%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIID-LPFKL 61
A G + LSI Q + FT+P F+P+P VD ++ T R P +D L
Sbjct: 165 ADPGSKNYGSLSIAVQYYAEAKLMFTVPKTVFVPQPNVDSAILRLTRRSEPPVDVLDEGF 224
Query: 62 IERVVSCIFRYRQKQVYKPASLLFPKR-KRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
V+ F R+K + S+ F + V + LE + P R +S+ EF +I
Sbjct: 225 FFDVIQGAFTQRRKTLLNNLSVFFKDSLSKPEVQAALEALEIDPKRRAETVSMAEFARIS 284
Query: 121 LAY 123
A+
Sbjct: 285 DAF 287
>gi|257894901|ref|ZP_05674554.1| dimethyladenosine transferase [Enterococcus faecium 1,231,408]
gi|257831280|gb|EEV57887.1| dimethyladenosine transferase [Enterococcus faecium 1,231,408]
Length = 241
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 57/128 (44%), Gaps = 6/128 (4%)
Query: 6 GMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF-KLIER 64
G + LSI Q + F +P F+P+P VD ++ T R P +++ K R
Sbjct: 116 GTKAYGSLSIAVQYYMEASLAFIVPKTVFVPQPNVDSAILKLTRRDIPAVEVTDEKAFFR 175
Query: 65 VVSCIFRYRQKQVYKPASLLFPK--RKRQLVVSLLERACVKPILRPYQLSVQEFGQICLA 122
+ F+ R+K ++ + K + + + LE A + P R LS+QEF + A
Sbjct: 176 LTKAAFQQRRKTLWNNLQHSYGKDDQTKAWLAKSLETAGIDPKRRGETLSLQEFAALSNA 235
Query: 123 YRDMCEEM 130
M E M
Sbjct: 236 ---MSENM 240
>gi|153206938|ref|ZP_01945756.1| dimethyladenosine transferase [Coxiella burnetii 'MSU Goat Q177']
gi|212219490|ref|YP_002306277.1| dimethyladenosine transferase [Coxiella burnetii CbuK_Q154]
gi|226729772|sp|B6J641.1|RSMA_COXB1 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|120577011|gb|EAX33635.1| dimethyladenosine transferase [Coxiella burnetii 'MSU Goat Q177']
gi|212013752|gb|ACJ21132.1| dimethyladenosine transferase [Coxiella burnetii CbuK_Q154]
Length = 258
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G RLS+M Q +C+ + FT+ +AF P P+V+ ++ PR H +
Sbjct: 141 ITAEVGSHDYGRLSVMAQYFCDNTYLFTVSPQAFTPPPRVESAIIRLIPR-HNFTPVAKN 199
Query: 61 L--IERVVSCIFRYRQKQVYKP-ASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
L + VV F YR+K V L+ P + LLE + P LRP +L+V++F
Sbjct: 200 LDQLSHVVKEAFSYRRKTVGNALKKLINPSQ-----WPLLE---INPQLRPQELTVEDFV 251
Query: 118 QIC 120
+I
Sbjct: 252 KIS 254
>gi|54307616|ref|YP_128636.1| dimethyladenosine transferase [Photobacterium profundum SS9]
gi|46912039|emb|CAG18834.1| putative dimethyladenosine transferase [Photobacterium profundum
SS9]
Length = 286
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G + RL++M Q + V +P ++F P P+VD VV TP HP +L
Sbjct: 163 LAAGPGCKAYGRLTVMAQYYSRVTPVLEVPPESFTPAPKVDSAVVRLTPYEVLPHPCTNL 222
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
K ++RV F R+K + L L V LE V P LRP +++Q+F
Sbjct: 223 --KWLDRVCREGFNQRRKTIRNCYKAL-------LTVEQLEDLGVNPGLRPENITLQQFV 273
Query: 118 QIC 120
++
Sbjct: 274 KMA 276
>gi|313123062|ref|YP_004033321.1| ribosomal RNA small subunit methyltransferase a [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
gi|312279625|gb|ADQ60344.1| Ribosomal RNA small subunit methyltransferase A [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
Length = 296
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 61/129 (47%), Gaps = 4/129 (3%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G + LSI Q +VD + +F+P+P+VD VV TP P K
Sbjct: 171 LAAQPGSKAYGPLSIAVQTQMSVDLALEVGHASFMPQPKVDSAVVVLTPLEKPADVGDRK 230
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFP-KRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
RVV F R+K + L P K R+ +++ L+ + P RP QL++ +F +I
Sbjct: 231 QFNRVVKLCFAQRRKTLANNLKTLLPDKEDREKLLADLD---LGPRQRPEQLAISDFIRI 287
Query: 120 CLAYRDMCE 128
A +M +
Sbjct: 288 SQAIAEMNK 296
>gi|452077039|gb|AGF93010.1| ribosomal RNA adenine methylase transferase [uncultured organism]
Length = 220
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF- 59
M+A G + RLS+M +V F I +F P P+VD VV TP P L +
Sbjct: 97 MVAKTGESEYSRLSVMVSTMADVKRLFDISKNSFYPPPKVDSSVVRLTPS-EPDFKLKYE 155
Query: 60 KLIERVVSCIFRYRQKQV 77
+ VV +F YR+KQ+
Sbjct: 156 ESFADVVKELFNYRRKQI 173
>gi|213580131|ref|ZP_03361957.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
Length = 120
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 12/112 (10%)
Query: 12 RLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDLPFKLIERVVSC 68
RLS+M Q +C V +P AF P P+VD VV P +P+ D+ +++ R+ +
Sbjct: 6 RLSVMAQYYCQVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPYPVKDI--RVLSRITTE 63
Query: 69 IFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
F R+K + LF V L + P +R +SV ++ Q+
Sbjct: 64 AFNQRRKTIRNSLGNLF-------SVETLTEMGIDPAMRAENISVAQYCQMA 108
>gi|228989249|ref|ZP_04149242.1| Dimethyladenosine transferase [Bacillus pseudomycoides DSM 12442]
gi|228770459|gb|EEM19030.1| Dimethyladenosine transferase [Bacillus pseudomycoides DSM 12442]
Length = 254
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 58/126 (46%), Gaps = 5/126 (3%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF- 59
+ A G + LSI Q + V+ T+P F+P+P VD V+ R PI+++
Sbjct: 122 LAAKPGTKDYGSLSIAIQYYTEVETVMTVPRTVFVPQPNVDSAVIRLLKRPKPIVEVKDE 181
Query: 60 KLIERVVSCIFRYRQKQVYKPASLL---FPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
K VV F R+K + S FPK K +L+ +L + P R LS++EF
Sbjct: 182 KFFFEVVRASFAQRRKTLMNNLSNNLNGFPKDK-ELLDRILTEVGIDPKRRGETLSIEEF 240
Query: 117 GQICLA 122
+ A
Sbjct: 241 AALSNA 246
>gi|109899726|ref|YP_662981.1| dimethyladenosine transferase [Pseudoalteromonas atlantica T6c]
gi|109702007|gb|ABG41927.1| dimethyladenosine transferase [Pseudoalteromonas atlantica T6c]
Length = 268
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 59/125 (47%), Gaps = 9/125 (7%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPF 59
+ A+ G + RLS+M Q C++ +P AF P P+VD VV P +V P+
Sbjct: 146 LAASPGNKNYGRLSVMAQYHCHIMPVIHVPPGAFNPPPKVDSAVVRLIPHKVRPVEVKSE 205
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
+ + RV + F R+K + K L + L + P LR LS+ +FGQI
Sbjct: 206 EALNRVCAQAFNQRRKTIRN-------SLKESLSEAQLISLDINPELRAENLSLAQFGQI 258
Query: 120 C-LAY 123
LA+
Sbjct: 259 ADLAF 263
>gi|410088326|ref|ZP_11285021.1| Dimethyladenosine transferase [Morganella morganii SC01]
gi|421493514|ref|ZP_15940870.1| KSGA [Morganella morganii subsp. morganii KT]
gi|455738041|ref|YP_007504307.1| Dimethyladenosine transferase [Morganella morganii subsp. morganii
KT]
gi|400192264|gb|EJO25404.1| KSGA [Morganella morganii subsp. morganii KT]
gi|409765248|gb|EKN49363.1| Dimethyladenosine transferase [Morganella morganii SC01]
gi|455419604|gb|AGG29934.1| Dimethyladenosine transferase [Morganella morganii subsp. morganii
KT]
Length = 270
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 54/130 (41%), Gaps = 11/130 (8%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPF 59
++A G + RLS+M Q +C V +P AF P P+VD VV P R +P +
Sbjct: 148 LVAGPGSKTYGRLSVMAQYYCQVVPVLDVPPTAFRPAPKVDSAVVRLIPHRENPYVLKDV 207
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
L+ RV + F R+K + LF L + P R +SV Q
Sbjct: 208 ALLSRVTTQAFNQRRKTIRNSLGDLFSPET-------LTELGIDPATRAENISV---AQY 257
Query: 120 CLAYRDMCEE 129
CL + E
Sbjct: 258 CLMANYLAEH 267
>gi|116492073|ref|YP_803808.1| dimethyladenosine transferase [Pediococcus pentosaceus ATCC 25745]
gi|122266463|sp|Q03HF6.1|RSMA_PEDPA RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|116102223|gb|ABJ67366.1| dimethyladenosine transferase [Pediococcus pentosaceus ATCC 25745]
Length = 297
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 61/122 (50%), Gaps = 9/122 (7%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPR----VHPIID 56
+ A G ++ LS++ Q N F + K F+P+P+VD +V TPR V P D
Sbjct: 164 LTAQPGDKEYGSLSVVVQYRMNTQIEFDVSSKVFVPRPKVDSAIVSLTPRAGWEVMPEDD 223
Query: 57 LPFKLIERVVSCIFRYRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQ 114
F + V C F +R+K ++ L+ K + + ++L+ + P +RP +L+V
Sbjct: 224 KDF--FKTVHGC-FMHRRKNIWNNMQGLYGKEPEIKAKIQNVLDDLGIDPQVRPERLTVL 280
Query: 115 EF 116
+F
Sbjct: 281 DF 282
>gi|62900532|sp|Q6LV41.2|RSMA_PHOPR RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
Length = 271
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G + RL++M Q + V +P ++F P P+VD VV TP HP +L
Sbjct: 148 LAAGPGCKAYGRLTVMAQYYSRVTPVLEVPPESFTPAPKVDSAVVRLTPYEVLPHPCTNL 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
K ++RV F R+K + L L V LE V P LRP +++Q+F
Sbjct: 208 --KWLDRVCREGFNQRRKTIRNCYKAL-------LTVEQLEDLGVNPGLRPENITLQQFV 258
Query: 118 QIC 120
++
Sbjct: 259 KMA 261
>gi|421893577|ref|ZP_16324071.1| dimethyladenosine transferase [Pediococcus pentosaceus IE-3]
gi|385273399|emb|CCG89443.1| dimethyladenosine transferase [Pediococcus pentosaceus IE-3]
Length = 297
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 61/122 (50%), Gaps = 9/122 (7%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPR----VHPIID 56
+ A G ++ LS++ Q N F + K F+P+P+VD +V TPR V P D
Sbjct: 164 LTAQPGDKEYGSLSVVVQYRMNTQIEFDVSSKVFVPRPKVDSAIVSLTPRADWEVMPEDD 223
Query: 57 LPFKLIERVVSCIFRYRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQ 114
F + V C F +R+K ++ L+ K + + ++L+ + P +RP +L+V
Sbjct: 224 KDF--FKTVHGC-FMHRRKNIWNNMQGLYGKEPEIKAKIQNVLDDLGIDPQVRPERLTVL 280
Query: 115 EF 116
+F
Sbjct: 281 DF 282
>gi|218673561|ref|ZP_03523230.1| dimethyladenosine transferase [Rhizobium etli GR56]
Length = 275
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 54/116 (46%), Gaps = 8/116 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A E + RL ++C F + +AF P P+V VVH TPR +P I
Sbjct: 161 IVAGEDDDHYGRLGVLCGWRTEARMAFDVSPQAFTPPPKVTSTVVHLTPRENP-IPCSVA 219
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+E+V F R+K + + L + SLL +A + P R LSV+EF
Sbjct: 220 NLEKVTQAAFGQRRKMLRQSLKPLGGE-------SLLVKAGIDPARRAETLSVEEF 268
>gi|126643017|ref|YP_001086001.1| S-adenosylmethionine-6-N'N'-adenosyl [Acinetobacter baumannii ATCC
17978]
Length = 187
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 52/117 (44%), Gaps = 8/117 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPF 59
+ A ++ RLS+M Q +C F +P AF P P+V V P PI
Sbjct: 69 ITAEPNTKEYGRLSVMIQYYCQPTFLFEVPAGAFNPPPKVTSAVFRLVPYEQKPITAKDE 128
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
K + R+V+ +F R+K + K L E+A V P+ RP L++ EF
Sbjct: 129 KALARLVAHVFTQRRKTLRN-------SLKGMLAEDGFEKAGVDPMARPETLTLAEF 178
>gi|306834382|ref|ZP_07467499.1| dimethyladenosine transferase [Streptococcus bovis ATCC 700338]
gi|304423555|gb|EFM26704.1| dimethyladenosine transferase [Streptococcus bovis ATCC 700338]
Length = 290
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 3/117 (2%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIFR 71
LSI Q + F +P FIP P VD ++ T R P++ + + RV F
Sbjct: 172 LSIAVQYYMTAKVAFVVPRTVFIPAPNVDSAILKMTRREQPLVQVKDEDFFFRVSKISFV 231
Query: 72 YRQKQVYKPASLLFPK--RKRQLVVSLLERACVKPILRPYQLSVQEFGQICLAYRDM 126
+R+K ++ + F K + + LE A +KP +R LS+ EF ++ A +++
Sbjct: 232 HRRKTLWNNLTSHFGKADETKAKLEQALEIAEIKPSIRGEALSIAEFAKLADALKEV 288
>gi|156935428|ref|YP_001439344.1| dimethyladenosine transferase [Cronobacter sakazakii ATCC BAA-894]
gi|389842269|ref|YP_006344353.1| dimethyladenosine transferase [Cronobacter sakazakii ES15]
gi|417789794|ref|ZP_12437407.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Cronobacter sakazakii E899]
gi|424797918|ref|ZP_18223460.1| Dimethyladenosine transferase [Cronobacter sakazakii 696]
gi|429120688|ref|ZP_19181356.1| Dimethyladenosine transferase [Cronobacter sakazakii 680]
gi|449309550|ref|YP_007441906.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Cronobacter sakazakii SP291]
gi|166221663|sp|A7MIA7.1|RSMA_ENTS8 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|156533682|gb|ABU78508.1| hypothetical protein ESA_03287 [Cronobacter sakazakii ATCC BAA-894]
gi|333956124|gb|EGL73814.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Cronobacter sakazakii E899]
gi|387852745|gb|AFK00843.1| dimethyladenosine transferase [Cronobacter sakazakii ES15]
gi|423233639|emb|CCK05330.1| Dimethyladenosine transferase [Cronobacter sakazakii 696]
gi|426324831|emb|CCK12093.1| Dimethyladenosine transferase [Cronobacter sakazakii 680]
gi|449099583|gb|AGE87617.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Cronobacter sakazakii SP291]
Length = 273
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +C V +P AF P P+VD VV P HP+ +L
Sbjct: 148 LVAGPNSKAYGRLSVMAQYFCQVIPVLEVPPTAFTPPPKVDSAVVRLVPHATPPHPVKEL 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+L+ R+ + F R+K + +F +L + P +R +SV ++
Sbjct: 208 --RLLSRLTTEAFNQRRKTIRNSLGNVFSPE-------VLTSLGIDPAMRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QMA 261
>gi|418035193|ref|ZP_12673651.1| Methyltransferase [Lactobacillus delbrueckii subsp. bulgaricus CNCM
I-1519]
gi|354690611|gb|EHE90555.1| Methyltransferase [Lactobacillus delbrueckii subsp. bulgaricus CNCM
I-1519]
Length = 275
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 57/126 (45%), Gaps = 2/126 (1%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G + LSI Q +VD + +F+P+P+VD VV TP P K
Sbjct: 150 LAAQPGSKAYGPLSIAVQTQMSVDLALEVGHASFMPQPKVDSAVVVLTPLEKPADVGDRK 209
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
RVV F R+K + L P ++ + LL + P RP QL++ +F +I
Sbjct: 210 QFNRVVKLCFAQRRKTLANNLKTLLPDKEDR--EKLLADLDLDPRQRPEQLAISDFIRIS 267
Query: 121 LAYRDM 126
A +M
Sbjct: 268 QAIVEM 273
>gi|331701953|ref|YP_004398912.1| ribosomal RNA small subunit methyltransferase A [Lactobacillus
buchneri NRRL B-30929]
gi|329129296|gb|AEB73849.1| Ribosomal RNA small subunit methyltransferase A [Lactobacillus
buchneri NRRL B-30929]
Length = 296
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 7/119 (5%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF---KLIERVVSCI 69
LS++ Q V+ F +P AFIP+P+VD +V TPRV ++ PF I V C
Sbjct: 176 LSVIVQELNQVEISFVVPKTAFIPQPKVDSAIVKLTPRVKRAVE-PFDQKAFISFVRGC- 233
Query: 70 FRYRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEFGQICLAYRDM 126
F +++K ++ +F K + + +L + +RP L+V +F + A+ +
Sbjct: 234 FMHQRKTLWNNLQGIFGKTPEVKGNIKEVLASVNIDAGVRPENLTVDQFVTLANAFHTL 292
>gi|297591597|ref|ZP_06950234.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
MN8]
gi|384865913|ref|YP_005746109.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
TCH60]
gi|297575466|gb|EFH94183.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
MN8]
gi|312436418|gb|ADQ75489.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
TCH60]
Length = 303
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 11/121 (9%)
Query: 6 GMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLP-----FK 60
G + LSI+ Q + T+P F+P P VD VV R P++ + FK
Sbjct: 175 GSKAYGSLSIVVQYYTETSKVLTVPKSVFMPPPNVDSIVVKLMQRTEPLVTVDNEEAFFK 234
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFP--KRKRQLVVSLLERACVKPILRPYQLSVQEFGQ 118
L F R+K + F K+ +++++ LE+A + P R LS+Q+F +
Sbjct: 235 L----AKAAFAQRRKTINNNYQNYFKDGKQHKEVIIQWLEQAGIDPRRRGETLSIQDFAK 290
Query: 119 I 119
+
Sbjct: 291 L 291
>gi|154707299|ref|YP_001425385.1| dimethyladenosine transferase [Coxiella burnetii Dugway 5J108-111]
gi|226729774|sp|A9KGZ8.1|RSMA_COXBN RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|154356585|gb|ABS78047.1| dimethyladenosine transferase [Coxiella burnetii Dugway 5J108-111]
Length = 258
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G RLS+M Q +C+ + FT+ +AF P P+V+ ++ PR H +
Sbjct: 141 ITAEVGSHDYGRLSVMAQYFCDNTYLFTVSPQAFTPPPRVESAIIRLIPR-HNFTPVAKN 199
Query: 61 L--IERVVSCIFRYRQKQVYKP-ASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
L + VV F YR+K V L+ P + LLE + P LRP +L+V++F
Sbjct: 200 LDQLSHVVKEAFSYRRKTVGNALKKLINPSQ-----WPLLE---INPQLRPQELTVEDFV 251
Query: 118 QIC 120
+I
Sbjct: 252 KIS 254
>gi|429113956|ref|ZP_19174874.1| Dimethyladenosine transferase [Cronobacter sakazakii 701]
gi|426317085|emb|CCK00987.1| Dimethyladenosine transferase [Cronobacter sakazakii 701]
Length = 219
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +C V +P AF P P+VD VV P HP+ +L
Sbjct: 94 LVAGPNSKAYGRLSVMAQYFCQVIPVLEVPPTAFTPPPKVDSAVVRLVPHATPPHPVKEL 153
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+L+ R+ + F R+K + +F +L + P +R +SV ++
Sbjct: 154 --RLLSRLTTEAFNQRRKTIRNSLGNVFSPE-------VLTSLGIDPAMRAENISVAQYC 204
Query: 118 QIC 120
Q+
Sbjct: 205 QMA 207
>gi|92113048|ref|YP_572976.1| dimethyladenosine transferase [Chromohalobacter salexigens DSM
3043]
gi|119365016|sp|Q1QZ31.1|RSMA_CHRSD RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|91796138|gb|ABE58277.1| dimethyladenosine transferase [Chromohalobacter salexigens DSM
3043]
Length = 282
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 54/121 (44%), Gaps = 8/121 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVH-PIIDLPF 59
+ AT G RLS+M Q C VD+ F +P +AF P+P+V+ +V P P +
Sbjct: 161 LAATPGSAAWGRLSVMTQYHCRVDNLFVVPAEAFTPRPKVESAIVRLIPHDEPPHVAHDE 220
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
L +V F R+K + K +L + + P RP LSV+E +I
Sbjct: 221 ALFGDIVREAFGQRRKTLRN-------NLKTRLDDTAWAALDIDPGRRPQTLSVEELVRI 273
Query: 120 C 120
Sbjct: 274 A 274
>gi|450161099|ref|ZP_21880365.1| dimethyladenosine transferase [Streptococcus mutans 66-2A]
gi|449239184|gb|EMC37913.1| dimethyladenosine transferase [Streptococcus mutans 66-2A]
Length = 291
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 57/117 (48%), Gaps = 3/117 (2%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ T R P++ + + RV F
Sbjct: 172 LSIAVQYYMTAKVAFIVPRTVFVPAPNVDSAILKMTRREQPLVQVQDEDFFFRVGKATFV 231
Query: 72 YRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEFGQICLAYRDM 126
+R+K ++ + F K + + + LE A +KP +R L++ +F ++ A R++
Sbjct: 232 HRRKTLWNNLTSHFGKSEEVKDKLEQALEAADIKPSIRGEALTITDFARLADALREV 288
>gi|52424685|ref|YP_087822.1| dimethyladenosine transferase [Mannheimia succiniciproducens
MBEL55E]
gi|62900507|sp|Q65UX3.1|RSMA_MANSM RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|52306737|gb|AAU37237.1| KsgA protein [Mannheimia succiniciproducens MBEL55E]
Length = 288
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 65/149 (43%), Gaps = 28/149 (18%)
Query: 12 RLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDLPFKLIERVVSC 68
RL+IM Q +C V +P AF P P+VD VV P HP+ DL + + RV S
Sbjct: 164 RLTIMTQYFCQVMPVLEVPPTAFKPAPKVDSAVVRLIPHKELPHPVKDLYW--LNRVTSQ 221
Query: 69 IFRYRQKQVYKPASLLF-PKRKRQLVVSLLERACVKPILRPYQLSVQEFGQICLAYRDMC 127
F R+K + S LF P++ L + L RA LS+ ++ ++
Sbjct: 222 AFNQRRKTLRNALSTLFTPEQLTALNIDLTARA--------ENLSIADYARLA------- 266
Query: 128 EEMPGLYEYTLEDTPGDIEPEAVAEQEGE 156
+ ++ P D+ + + E+ E
Sbjct: 267 -------NWLADNPPADVRRDEIIEENEE 288
>gi|228995432|ref|ZP_04155102.1| Dimethyladenosine transferase [Bacillus mycoides Rock3-17]
gi|229003046|ref|ZP_04160903.1| Dimethyladenosine transferase [Bacillus mycoides Rock1-4]
gi|228758204|gb|EEM07392.1| Dimethyladenosine transferase [Bacillus mycoides Rock1-4]
gi|228764293|gb|EEM13170.1| Dimethyladenosine transferase [Bacillus mycoides Rock3-17]
Length = 258
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 58/126 (46%), Gaps = 5/126 (3%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF- 59
+ A G + LSI Q + V+ T+P F+P+P VD V+ R PI+++
Sbjct: 126 LAAKPGTKDYGSLSIAIQYYTEVETVMTVPRTVFVPQPNVDSAVIRLLKRPKPIVEVKDE 185
Query: 60 KLIERVVSCIFRYRQKQVYKPASLL---FPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
K VV F R+K + S FPK K +L+ +L + P R LS++EF
Sbjct: 186 KFFFEVVRASFAQRRKTLMNNLSNNLNGFPKDK-ELLDRILTEVGIDPKRRGETLSIEEF 244
Query: 117 GQICLA 122
+ A
Sbjct: 245 AALSNA 250
>gi|421780061|ref|ZP_16216551.1| dimethyladenosine transferase [Moraxella catarrhalis RH4]
gi|407812855|gb|EKF83639.1| dimethyladenosine transferase [Moraxella catarrhalis RH4]
Length = 284
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 9/120 (7%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPF 59
+ A ++ RLS++ Q +C D+ T+P AF P P+V V TP + PI +
Sbjct: 155 ITAEPNSKEYGRLSVIMQYYCQSDYLLTVPKGAFNPPPKVTSAVFRLTPYKTKPITAMDE 214
Query: 60 KLIERVVSCIFRYRQKQ---VYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+ VV F +R+K ++K LL L S E+ + P RP L V EF
Sbjct: 215 SVFALVVRESFNHRRKTLRAIFKANGLL-----PTLDESDFEKIGINPSARPETLCVHEF 269
>gi|406668942|ref|ZP_11076233.1| dimethyladenosine transferase [Facklamia ignava CCUG 37419]
gi|405585223|gb|EKB59058.1| dimethyladenosine transferase [Facklamia ignava CCUG 37419]
Length = 292
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 59/127 (46%), Gaps = 1/127 (0%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDL-PF 59
MIA + LSI QN + F +P F P P VD V+ T R+ P++ +
Sbjct: 165 MIAQPQTKDYGSLSIAIQNTMEAELSFIVPRTVFNPPPNVDSAVLTLTRRMSPLVPVEDT 224
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
E+ V F R+K ++ + K + + + + L+++ + P R +L++ +F +
Sbjct: 225 AAFEQFVQVCFTQRRKTLWNNLRNYYGKEQSEFLQTALDKSQINPNQRAEELTIDDFYAL 284
Query: 120 CLAYRDM 126
A+ +
Sbjct: 285 YQAFNAL 291
>gi|397688223|ref|YP_006525542.1| KsgA/Dim1 family 16S ribosomal RNA methyltransferase [Pseudomonas
stutzeri DSM 10701]
gi|395809779|gb|AFN79184.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas stutzeri DSM 10701]
Length = 267
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 51/119 (42%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 144 LAAQPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPAPKVDSAIVRLVPHEVLPHPARD- 202
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+L+E +V F R+K + K L +E A V RP QL + F
Sbjct: 203 -HRLLENLVRQAFSQRRKTLRNTL-------KGMLDAQAIEAAEVDGSQRPEQLDLAAF 253
>gi|300770912|ref|ZP_07080789.1| dimethyladenosine transferase [Sphingobacterium spiritivorum ATCC
33861]
gi|300762185|gb|EFK59004.1| dimethyladenosine transferase [Sphingobacterium spiritivorum ATCC
33861]
Length = 259
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 12/120 (10%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFKLI 62
A G ++ LS+ Q + +V++ FT+ AF P P+V GV+ T +D KL
Sbjct: 143 AKAGSKEYGILSVFLQAYYHVEYLFTVKAGAFTPPPKVLSGVIRMTRNEREELDCDEKLF 202
Query: 63 ERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPI--LRPYQLSVQEFGQIC 120
RVV F R+K + S + PK ++ P+ LR +LSV++F Q+
Sbjct: 203 WRVVKAGFNQRRKTLRNSLSGVVPK----------DKMSDNPLYELRAERLSVEDFVQLT 252
>gi|165918726|ref|ZP_02218812.1| dimethyladenosine transferase [Coxiella burnetii Q321]
gi|212213440|ref|YP_002304376.1| dimethyladenosine transferase [Coxiella burnetii CbuG_Q212]
gi|215919310|ref|NP_820957.2| dimethyladenosine transferase [Coxiella burnetii RSA 493]
gi|218511667|sp|Q83AC2.2|RSMA_COXBU RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226729773|sp|B6J3A6.1|RSMA_COXB2 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|165917554|gb|EDR36158.1| dimethyladenosine transferase [Coxiella burnetii Q321]
gi|206584195|gb|AAO91471.2| dimethyladenosine transferase [Coxiella burnetii RSA 493]
gi|212011850|gb|ACJ19231.1| dimethyladenosine transferase [Coxiella burnetii CbuG_Q212]
Length = 258
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G RLS+M Q +C+ + FT+ +AF P P+V+ ++ PR H +
Sbjct: 141 ITAEVGSHDYGRLSVMAQYFCDNTYLFTVSPQAFTPPPRVESAIIRLIPR-HNFTPVAKN 199
Query: 61 L--IERVVSCIFRYRQKQVYKP-ASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
L + VV F YR+K V L+ P + LLE + P LRP +L+V++F
Sbjct: 200 LDQLSHVVKEAFSYRRKTVGNALKKLINPSQ-----WPLLE---INPQLRPQELTVEDFV 251
Query: 118 QIC 120
+I
Sbjct: 252 KIS 254
>gi|293573156|ref|ZP_06684093.1| dimethyladenosine transferase [Enterococcus faecium E980]
gi|430840547|ref|ZP_19458471.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E1007]
gi|431064382|ref|ZP_19493729.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E1604]
gi|431123784|ref|ZP_19498497.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E1613]
gi|431593545|ref|ZP_19521874.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E1861]
gi|431738452|ref|ZP_19527395.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E1972]
gi|431741696|ref|ZP_19530598.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E2039]
gi|291606794|gb|EFF36179.1| dimethyladenosine transferase [Enterococcus faecium E980]
gi|430495034|gb|ELA71250.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E1007]
gi|430567416|gb|ELB06500.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E1613]
gi|430569023|gb|ELB08053.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E1604]
gi|430591422|gb|ELB29460.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E1861]
gi|430597180|gb|ELB34983.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E1972]
gi|430601198|gb|ELB38808.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E2039]
Length = 294
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 3/120 (2%)
Query: 6 GMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF-KLIER 64
G + LSI Q + F +P F+P+P VD ++ T R P +++ K R
Sbjct: 169 GTKAYGSLSIAVQYYMEASLAFIVPKTVFVPQPNVDSAILKLTRRDTPAVEVTDEKAFFR 228
Query: 65 VVSCIFRYRQKQVYKPASLLFPK--RKRQLVVSLLERACVKPILRPYQLSVQEFGQICLA 122
+ F+ R+K ++ + K + + + LE A + P R LS+QEF + A
Sbjct: 229 LTKAAFQQRRKTLWNNLQHSYGKDDQTKAWLAKSLETAGIDPKRRGETLSLQEFAALSNA 288
>gi|409122189|ref|ZP_11221584.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Gillisia sp. CBA3202]
Length = 289
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 8/120 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G + LS++ Q + VD+ FT+P F P P+VD GV+ + + +
Sbjct: 170 IAAPHGNKTYGILSVLAQAFYEVDYLFTVPPTVFNPPPKVDSGVIRLKRKENFTLTCDEA 229
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
L RVV F+ R+K + +L +L E A RP QLSVQEF ++
Sbjct: 230 LFFRVVKTAFQQRRKTLRNSLKTF------ELSDNLREDAIFGQ--RPEQLSVQEFIELT 281
>gi|416247008|ref|ZP_11635377.1| dimethyladenosine transferase [Moraxella catarrhalis BC8]
gi|326570246|gb|EGE20291.1| dimethyladenosine transferase [Moraxella catarrhalis BC8]
Length = 284
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 9/120 (7%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPF 59
+ A ++ RLS++ Q +C D+ T+P AF P P+V V TP + PI +
Sbjct: 155 ITAEPNSKEYGRLSVIMQYYCQSDYLLTVPKGAFNPPPKVTSAVFRLTPYKTKPITAMDE 214
Query: 60 KLIERVVSCIFRYRQKQ---VYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+ VV F +R+K ++K LL L S E+ + P RP L V EF
Sbjct: 215 SVFALVVRESFNHRRKTLRAIFKANGLL-----PTLDESDFEKIGINPSARPETLCVHEF 269
>gi|257899761|ref|ZP_05679414.1| dimethyladenosine transferase [Enterococcus faecium Com15]
gi|257837673|gb|EEV62747.1| dimethyladenosine transferase [Enterococcus faecium Com15]
Length = 294
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 3/120 (2%)
Query: 6 GMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF-KLIER 64
G + LSI Q + F +P F+P+P VD ++ T R P +++ K R
Sbjct: 169 GTKAYGSLSIAVQYYMEASLAFIVPKTVFVPQPNVDSAILKLTRRDTPAVEVTDEKAFFR 228
Query: 65 VVSCIFRYRQKQVYKPASLLFPK--RKRQLVVSLLERACVKPILRPYQLSVQEFGQICLA 122
+ F+ R+K ++ + K + + + LE A + P R LS+QEF + A
Sbjct: 229 LTKAAFQQRRKTLWNNLQHSYGKDDQTKAWLAKSLETAGIDPKRRGETLSLQEFAALSNA 288
>gi|253988048|ref|YP_003039404.1| dimethyladenosine transferase [Photorhabdus asymbiotica]
gi|253779498|emb|CAQ82659.1| dimethyladenosine transferase [Photorhabdus asymbiotica]
Length = 272
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 53/119 (44%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A G + RLS+M Q +C V +P AF P P+VD VV P H I P K
Sbjct: 148 LVAGPGSKAFGRLSVMAQYYCQVIPVLEVPPTAFTPAPKVDSAVVRLIP--HKSIPYPVK 205
Query: 61 ---LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
++ R+ + F R+K + LF V L + P R +SV+++
Sbjct: 206 NIRMLSRITTQAFNQRRKTIRNSLGDLF-------TVEQLTEFGIDPSTRAENISVEQY 257
>gi|227537514|ref|ZP_03967563.1| dimethyladenosine transferase [Sphingobacterium spiritivorum ATCC
33300]
gi|227242651|gb|EEI92666.1| dimethyladenosine transferase [Sphingobacterium spiritivorum ATCC
33300]
Length = 259
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 12/120 (10%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFKLI 62
A G ++ LS+ Q + +V++ FT+ AF P P+V GV+ T +D KL
Sbjct: 143 AKAGSKEYGILSVFLQAYYHVEYLFTVKAGAFTPPPKVLSGVIRMTRNEREELDCDEKLF 202
Query: 63 ERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPI--LRPYQLSVQEFGQIC 120
RVV F R+K + S + PK ++ P+ LR +LSV++F Q+
Sbjct: 203 WRVVKAGFNQRRKTLRNSLSGVVPK----------DKMSDNPLYELRAERLSVEDFVQLT 252
>gi|345862688|ref|ZP_08814902.1| ribosomal RNA small subunit methyltransferase A [endosymbiont of
Tevnia jerichonana (vent Tica)]
gi|345877710|ref|ZP_08829449.1| dimethyladenosine transferase [endosymbiont of Riftia pachyptila
(vent Ph05)]
gi|344225240|gb|EGV51604.1| dimethyladenosine transferase [endosymbiont of Riftia pachyptila
(vent Ph05)]
gi|345126030|gb|EGW55896.1| ribosomal RNA small subunit methyltransferase A [endosymbiont of
Tevnia jerichonana (vent Tica)]
Length = 265
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 8/117 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
M A G + RLS+M Q C V F I AF P P+VD V P P + + +
Sbjct: 141 MAAGPGSKTYGRLSVMLQAKCRVTPLFLIGPGAFNPPPKVDSAFVRLEPFSEPPLAIEDQ 200
Query: 61 -LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
L ++V+ F R+K + + L +E A V P +RP QLS++ F
Sbjct: 201 ALFAQLVAQAFSQRRKTLRN-------SLRNWLTAEQIEAAGVDPTIRPEQLSLEAF 250
>gi|153956353|ref|YP_001397118.1| dimethyladenosine transferase [Clostridium kluyveri DSM 555]
gi|219856668|ref|YP_002473790.1| hypothetical protein CKR_3325 [Clostridium kluyveri NBRC 12016]
gi|146349211|gb|EDK35747.1| KsgA [Clostridium kluyveri DSM 555]
gi|219570392|dbj|BAH08376.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 281
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
MI+ ++ LS++ Q +C+V+ + AFIP P+V+ V+ T +P + + +
Sbjct: 153 MISEPNCKRYGALSLLVQYYCDVEVLRKVSPYAFIPSPKVESIVIKLTKLNNPRVKIKSE 212
Query: 61 -LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
L R++ C F R+K ++ L K R+ + +++ + P R LS++EFG
Sbjct: 213 DLFFRIIRCSFNMRRKTLWNALKAL--KLSREYIEKAFDKSRIDPKRRGETLSIEEFG 268
>gi|398836554|ref|ZP_10593888.1| dimethyladenosine transferase [Herbaspirillum sp. YR522]
gi|398211667|gb|EJM98284.1| dimethyladenosine transferase [Herbaspirillum sp. YR522]
Length = 260
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 59/116 (50%), Gaps = 8/116 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
M+A G + RLS+M Q +D F +P AF P P+VD +V P P++
Sbjct: 141 MVAEPGSKTYGRLSVMLQWRYRMDLLFVVPPTAFDPPPKVDSAIVRMIPLDQPLV-CEQG 199
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
L+E+VV+ F R+K + + LF + + L +A + P LRP + ++++
Sbjct: 200 LLEQVVTKAFSQRRKVIRNCLAGLFSEEQ-------LAQAGIDPQLRPETIPMEQY 248
>gi|290474828|ref|YP_003467708.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase,
kasugamycin resistance [Xenorhabdus bovienii SS-2004]
gi|289174141|emb|CBJ80928.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase,
kasugamycin resistance [Xenorhabdus bovienii SS-2004]
Length = 274
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 55/119 (46%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A G + RLS+M Q +C V +P AF P P+VD +V P +P+ D+
Sbjct: 148 LVAGPGCKAYGRLSVMAQYYCQVIPVLEVPPTAFTPAPKVDSAIVRLMPHKAMPYPVKDI 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+++ RV + F R+K + LF V L V P R +SV+++
Sbjct: 208 --RMLARVTTQAFNQRRKTIRNSLGDLFS-------VEQLSELGVDPGTRAENISVEQY 257
>gi|418581163|ref|ZP_13145247.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CIG1605]
gi|418891057|ref|ZP_13445176.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CIG1176]
gi|418896874|ref|ZP_13450948.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CIGC341D]
gi|418901586|ref|ZP_13455636.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CIG1214]
gi|418908242|ref|ZP_13462251.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CIG149]
gi|418917805|ref|ZP_13471762.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CIG1267]
gi|418922121|ref|ZP_13476039.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CIG1233]
gi|418982913|ref|ZP_13530619.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CIG1242]
gi|418984989|ref|ZP_13532680.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CIG1500]
gi|377700678|gb|EHT25013.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CIG1214]
gi|377703423|gb|EHT27738.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CIG1242]
gi|377708203|gb|EHT32493.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CIG1500]
gi|377712207|gb|EHT36428.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CIG1605]
gi|377733131|gb|EHT57177.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CIG1176]
gi|377736301|gb|EHT60327.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CIG1233]
gi|377749440|gb|EHT73389.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CIG1267]
gi|377757043|gb|EHT80938.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CIG149]
gi|377762361|gb|EHT86226.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CIGC341D]
Length = 296
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 11/121 (9%)
Query: 6 GMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLP-----FK 60
G + LSI+ Q + T+P F+P P VD VV R P++ + FK
Sbjct: 168 GSKAYGSLSIVVQYYTETSKVLTVPKSVFMPPPNVDSIVVKLMQRTEPLVTVDNEEAFFK 227
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFP--KRKRQLVVSLLERACVKPILRPYQLSVQEFGQ 118
L F R+K + F K+ +++++ LE+A + P R LS+Q+F +
Sbjct: 228 L----AKAAFAQRRKTINNNYQNYFKDGKQHKEVIIQWLEQAGIDPRRRGETLSIQDFAK 283
Query: 119 I 119
+
Sbjct: 284 L 284
>gi|254522856|ref|ZP_05134911.1| dimethyladenosine transferase [Stenotrophomonas sp. SKA14]
gi|219720447|gb|EED38972.1| dimethyladenosine transferase [Stenotrophomonas sp. SKA14]
Length = 267
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 54/125 (43%), Gaps = 12/125 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDL-PF 59
M A G + RLS+M Q +C V F +P AF P P+VD VV PR I +
Sbjct: 151 MAAGPGSKVYGRLSVMLQAYCQVTSLFVVPPGAFRPPPKVDSAVVRLVPRDPASIGINDH 210
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLE--RACVKPILRPYQLSVQEFG 117
K VV F R+K + + VVS + A V+P R QL V EF
Sbjct: 211 KRFAEVVKAAFGQRRKTL---------RNALNNVVSAEQFIAAGVRPDARAEQLDVAEFV 261
Query: 118 QICLA 122
+ A
Sbjct: 262 ALANA 266
>gi|416217918|ref|ZP_11624586.1| dimethyladenosine transferase [Moraxella catarrhalis 7169]
gi|416240140|ref|ZP_11632255.1| dimethyladenosine transferase [Moraxella catarrhalis BC1]
gi|416242399|ref|ZP_11633435.1| dimethyladenosine transferase [Moraxella catarrhalis BC7]
gi|326560243|gb|EGE10631.1| dimethyladenosine transferase [Moraxella catarrhalis 7169]
gi|326566439|gb|EGE16589.1| dimethyladenosine transferase [Moraxella catarrhalis BC1]
gi|326570983|gb|EGE21007.1| dimethyladenosine transferase [Moraxella catarrhalis BC7]
Length = 284
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 9/120 (7%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPF 59
+ A ++ RLS++ Q +C D+ T+P AF P P+V V TP + PI +
Sbjct: 155 ITAEPNSKEYGRLSVIMQYYCQSDYLLTVPKGAFNPPPKVTSAVFRLTPYKTKPITAMDE 214
Query: 60 KLIERVVSCIFRYRQKQ---VYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+ VV F +R+K ++K LL L S E+ + P RP L V EF
Sbjct: 215 SVFALVVRESFNHRRKTLRAIFKANGLL-----PTLDESDFEKIGINPSARPETLCVHEF 269
>gi|49482720|ref|YP_039944.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
MRSA252]
gi|257424604|ref|ZP_05601032.1| ribosomal RNA adenine dimethylase [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257427270|ref|ZP_05603671.1| ribosomal RNA adenine dimethylase [Staphylococcus aureus subsp.
aureus 65-1322]
gi|257429907|ref|ZP_05606293.1| ribosomal RNA adenine dimethylase [Staphylococcus aureus subsp.
aureus 68-397]
gi|257432610|ref|ZP_05608972.1| ribosomal RNA adenine dimethylase [Staphylococcus aureus subsp.
aureus E1410]
gi|257435514|ref|ZP_05611564.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
M876]
gi|282903078|ref|ZP_06310970.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
C160]
gi|282904868|ref|ZP_06312728.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282913320|ref|ZP_06321111.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
M899]
gi|282918274|ref|ZP_06326014.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
C427]
gi|282923025|ref|ZP_06330711.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
C101]
gi|283957282|ref|ZP_06374740.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
A017934/97]
gi|293500369|ref|ZP_06666221.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
58-424]
gi|293509307|ref|ZP_06668023.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
M809]
gi|293515896|ref|ZP_06670586.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
M1015]
gi|295427027|ref|ZP_06819664.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|415684046|ref|ZP_11449201.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CGS00]
gi|417888536|ref|ZP_12532644.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21195]
gi|418565515|ref|ZP_13129915.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21264]
gi|418596740|ref|ZP_13160292.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21342]
gi|418601110|ref|ZP_13164553.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21345]
gi|62900528|sp|Q6GJH8.1|RSMA_STAAR RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|49240849|emb|CAG39516.1| ribosomal RNA adenine dimethylase [Staphylococcus aureus subsp.
aureus MRSA252]
gi|257272631|gb|EEV04751.1| ribosomal RNA adenine dimethylase [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257275921|gb|EEV07389.1| ribosomal RNA adenine dimethylase [Staphylococcus aureus subsp.
aureus 65-1322]
gi|257279423|gb|EEV10018.1| ribosomal RNA adenine dimethylase [Staphylococcus aureus subsp.
aureus 68-397]
gi|257282475|gb|EEV12608.1| ribosomal RNA adenine dimethylase [Staphylococcus aureus subsp.
aureus E1410]
gi|257285151|gb|EEV15268.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
M876]
gi|282314544|gb|EFB44931.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
C101]
gi|282317840|gb|EFB48209.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
C427]
gi|282322791|gb|EFB53111.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
M899]
gi|282331985|gb|EFB61494.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282596504|gb|EFC01464.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
C160]
gi|283791206|gb|EFC30016.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
A017934/97]
gi|290921304|gb|EFD98362.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
M1015]
gi|291096329|gb|EFE26589.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
58-424]
gi|291467852|gb|EFF10362.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
M809]
gi|295129030|gb|EFG58659.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|315193854|gb|EFU24248.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CGS00]
gi|341855031|gb|EGS95889.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21195]
gi|371973167|gb|EHO90526.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21264]
gi|374396680|gb|EHQ67907.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21342]
gi|374399855|gb|EHQ70988.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21345]
Length = 297
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 11/121 (9%)
Query: 6 GMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLP-----FK 60
G + LSI+ Q + T+P F+P P VD VV R P++ + FK
Sbjct: 169 GSKAYGSLSIVVQYYTETSKVLTVPKSVFMPPPNVDSIVVKLMQRTEPLVTVDNEEAFFK 228
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFP--KRKRQLVVSLLERACVKPILRPYQLSVQEFGQ 118
L F R+K + F K+ +++++ LE+A + P R LS+Q+F +
Sbjct: 229 L----AKAAFAQRRKTINNNYQNYFKDGKQHKEVIIQWLEQAGIDPRRRGETLSIQDFAK 284
Query: 119 I 119
+
Sbjct: 285 L 285
>gi|407797369|ref|ZP_11144312.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salimicrobium sp. MJ3]
gi|407018252|gb|EKE30981.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salimicrobium sp. MJ3]
Length = 291
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 55/122 (45%), Gaps = 2/122 (1%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
M A+ G + LSI Q + T+P F+P+P VD V+H R P +D+ +
Sbjct: 163 MAASPGTKSYGSLSIAVQYYTEASIPMTVPKSVFMPQPNVDSAVLHLEKRAEPPVDVQDE 222
Query: 61 -LIERVVSCIFRYRQKQVYKPASLLFPKR-KRQLVVSLLERACVKPILRPYQLSVQEFGQ 118
+V F+ R+K + F ++ + +E + + P R LS++EF +
Sbjct: 223 DFFFEIVRASFKQRRKTLINNLGSFFKGSLEKSEIRERMEGSGIDPGRRGESLSMEEFAK 282
Query: 119 IC 120
+
Sbjct: 283 LA 284
>gi|359299574|ref|ZP_09185413.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Haemophilus [parainfluenzae] CCUG 13788]
Length = 291
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 52/112 (46%), Gaps = 12/112 (10%)
Query: 12 RLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDLPFKLIERVVSC 68
RL+IM Q +C V +P AF P P+VD VV P HP+ D+ + + RV +
Sbjct: 166 RLTIMAQYYCQVMPVLEVPPTAFKPAPKVDSAVVRLMPYKELPHPVKDIYW--LNRVTTQ 223
Query: 69 IFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
F R+K + S LF + LE V I R LS+ ++ ++
Sbjct: 224 AFNQRRKTLRNALSTLFSAEQ-------LEALGVSLIARAENLSIADYARLA 268
>gi|326804008|ref|YP_004321826.1| dimethyladenosine transferase [Aerococcus urinae ACS-120-V-Col10a]
gi|326650269|gb|AEA00452.1| dimethyladenosine transferase [Aerococcus urinae ACS-120-V-Col10a]
Length = 294
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 62/132 (46%), Gaps = 11/132 (8%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G + L+I+ +C + +P F P+P+VD V+H R P P K
Sbjct: 163 LTAQAGTKAYSALTIVLNYYCQSEIAVKVPKTVFKPRPKVDSAVLHLKRRQAP----PVK 218
Query: 61 -----LIERVVSCIFRYRQKQVYKPASLLFPKRKRQ--LVVSLLERACVKPILRPYQLSV 113
L +VV F +R+K ++ LF + ++ + + +E A + P +R QL++
Sbjct: 219 PQNEALFFKVVKGAFAHRRKTLWNNLKSLFAGQYQEPSDLEAAIEAAGIDPKVRAEQLTI 278
Query: 114 QEFGQICLAYRD 125
++F + A +
Sbjct: 279 EDFSHLSDALNE 290
>gi|241203944|ref|YP_002975040.1| dimethyladenosine transferase [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240857834|gb|ACS55501.1| dimethyladenosine transferase [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 275
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 53/116 (45%), Gaps = 8/116 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A E + RL ++C F +P +AF P P+V VVH PR P I
Sbjct: 161 IVANEDDDHYGRLGVLCGWRTEARMAFDVPPQAFTPPPKVTSTVVHLIPRDTP-IPCAVA 219
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+E+V F R+K + + L + SLL +A + P R LSV+EF
Sbjct: 220 NLEKVTQAAFGQRRKMLRQSLKPLGGE-------SLLVKAGIDPARRAETLSVEEF 268
>gi|152995082|ref|YP_001339917.1| dimethyladenosine transferase [Marinomonas sp. MWYL1]
gi|189028811|sp|A6VU53.1|RSMA_MARMS RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|150836006|gb|ABR69982.1| dimethyladenosine transferase [Marinomonas sp. MWYL1]
Length = 266
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G RLS+M Q +C V+ F + ++F P P+VD +V TP HP+ ++
Sbjct: 145 LAARPGDSLYGRLSVMAQYYCAVESLFIVGPESFDPAPKVDSAIVRMTPHKILPHPVNNI 204
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
K++E +V F+ R+K + K L + P LRP +L V++F
Sbjct: 205 --KMLEDMVRIGFQQRRKTLRN-------NYKGVLDNDDFSALNIDPTLRPERLDVEDFV 255
Query: 118 QIC 120
+I
Sbjct: 256 RIA 258
>gi|300172804|ref|YP_003771969.1| dimethyladenosine transferase [Leuconostoc gasicomitatum LMG 18811]
gi|299887182|emb|CBL91150.1| Dimethyladenosine transferase [Leuconostoc gasicomitatum LMG 18811]
Length = 295
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 60/123 (48%), Gaps = 4/123 (3%)
Query: 6 GMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV-HPIIDLPFKLIER 64
G + L++ Q + N +P AF P P+V+ VV TP V I+D P +L
Sbjct: 169 GTKAYGVLTLTVQYFANAQLAIEVPATAFNPAPKVESAVVKLTPLVPQVIVDQPERLF-G 227
Query: 65 VVSCIFRYRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEFGQICLA 122
V+ F +R+K ++ + K ++ + + L++A + P +R +L + + + LA
Sbjct: 228 VIKGSFSHRRKSLWNNMLQTYGKDTYIKEKITAALKQATIDPSIRAERLDLTQLTTLYLA 287
Query: 123 YRD 125
R+
Sbjct: 288 LRE 290
>gi|296113252|ref|YP_003627190.1| dimethyladenosine transferase [Moraxella catarrhalis RH4]
gi|416229154|ref|ZP_11627943.1| dimethyladenosine transferase [Moraxella catarrhalis 46P47B1]
gi|416255195|ref|ZP_11639071.1| dimethyladenosine transferase [Moraxella catarrhalis O35E]
gi|295920946|gb|ADG61297.1| dimethyladenosine transferase [Moraxella catarrhalis BBH18]
gi|326562888|gb|EGE13175.1| dimethyladenosine transferase [Moraxella catarrhalis 46P47B1]
gi|326576903|gb|EGE26809.1| dimethyladenosine transferase [Moraxella catarrhalis O35E]
Length = 284
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 9/120 (7%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPF 59
+ A ++ RLS++ Q +C D+ T+P AF P P+V V TP + PI +
Sbjct: 155 ITAEPNSKEYGRLSVIMQYYCQSDYLLTVPKGAFNPPPKVTSAVFRLTPYKTKPITAMDE 214
Query: 60 KLIERVVSCIFRYRQKQ---VYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+ VV F +R+K ++K LL L S E+ + P RP L V EF
Sbjct: 215 SVFALVVRESFNHRRKTLRAIFKANGLL-----PTLDESDFEKIGINPSARPETLCVHEF 269
>gi|282907815|ref|ZP_06315653.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282910131|ref|ZP_06317937.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282325979|gb|EFB56285.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282328291|gb|EFB58566.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
WW2703/97]
Length = 299
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 11/121 (9%)
Query: 6 GMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLP-----FK 60
G + LSI+ Q + T+P F+P P VD VV R P++ + FK
Sbjct: 171 GSKAYGSLSIVVQYYTETSKVLTVPKSVFMPPPNVDSIVVKLMQRTEPLVTVDNEEAFFK 230
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFP--KRKRQLVVSLLERACVKPILRPYQLSVQEFGQ 118
L F R+K + F K+ +++++ LE+A + P R LS+Q+F +
Sbjct: 231 L----AKAAFAQRRKTINNNYQNYFKDGKQHKEVIIQWLEQAGIDPRRRGETLSIQDFAK 286
Query: 119 I 119
+
Sbjct: 287 L 287
>gi|270263922|ref|ZP_06192190.1| dimethyladenosine transferase [Serratia odorifera 4Rx13]
gi|421781603|ref|ZP_16218068.1| dimethyladenosine transferase [Serratia plymuthica A30]
gi|270042115|gb|EFA15211.1| dimethyladenosine transferase [Serratia odorifera 4Rx13]
gi|407756169|gb|EKF66287.1| dimethyladenosine transferase [Serratia plymuthica A30]
Length = 272
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RL++M Q +CNV +P +F P P+VD VV P +P+ D+
Sbjct: 148 LVAGPNSKAYGRLTVMAQYYCNVIPVLEVPPTSFTPAPKVDSAVVRLVPHQVNPNPVGDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+++ R+ + F R+K V LF + L V P LR +SV ++
Sbjct: 208 --RMLSRITTQAFNQRRKTVRNSLGDLFTPEQ-------LTELGVDPTLRAENISVAQY 257
>gi|423111522|ref|ZP_17099216.1| ribosomal RNA small subunit methyltransferase A [Klebsiella oxytoca
10-5243]
gi|423112460|ref|ZP_17100151.1| ribosomal RNA small subunit methyltransferase A [Klebsiella oxytoca
10-5245]
gi|376376721|gb|EHS89498.1| ribosomal RNA small subunit methyltransferase A [Klebsiella oxytoca
10-5243]
gi|376390837|gb|EHT03519.1| ribosomal RNA small subunit methyltransferase A [Klebsiella oxytoca
10-5245]
Length = 273
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +C + +P AF P P+VD VV P HP+ D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCQIIPVLEVPPSAFTPPPKVDSAVVRLVPYRTLPHPVKDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V +L + P R +SV ++
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VEVLTELGIDPAKRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QLA 261
>gi|386823108|ref|ZP_10110263.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Serratia plymuthica PRI-2C]
gi|386379895|gb|EIJ20677.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Serratia plymuthica PRI-2C]
Length = 272
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RL++M Q +CNV +P +F P P+VD VV P +P+ D+
Sbjct: 148 LVAGPNSKAYGRLTVMAQYYCNVIPVLEVPPTSFTPAPKVDSAVVRLVPHQVNPNPVGDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+++ R+ + F R+K V LF + L V P LR +SV ++
Sbjct: 208 --RMLSRITTQAFNQRRKTVRNSLGDLFTPEQ-------LTELGVDPTLRAENISVAQY 257
>gi|338811316|ref|ZP_08623539.1| dimethyladenosine transferase [Acetonema longum DSM 6540]
gi|337276721|gb|EGO65135.1| dimethyladenosine transferase [Acetonema longum DSM 6540]
Length = 285
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 3/124 (2%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPR-VHPIIDLPF 59
M+A G + LS+ Q + + F +P ++FIP P V+ V+ T R V P+
Sbjct: 158 MVAAPGGKDYGALSVAVQYYTQPEILFNVPPQSFIPSPAVESAVIRCTVRNVPPVALQEE 217
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
KL RVV F R+K + +L + + +L +A + P R LS+QEF I
Sbjct: 218 KLFFRVVKGAFAQRRKTLSN--ALKTTGLDKAAIGWMLSQAAIDPQRRGETLSLQEFADI 275
Query: 120 CLAY 123
A+
Sbjct: 276 ANAW 279
>gi|440289144|ref|YP_007341909.1| dimethyladenosine transferase [Enterobacteriaceae bacterium strain
FGI 57]
gi|440048666|gb|AGB79724.1| dimethyladenosine transferase [Enterobacteriaceae bacterium strain
FGI 57]
Length = 273
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 59/134 (44%), Gaps = 15/134 (11%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP---RVHPIIDL 57
++A + RL++M Q +C V +P AF P P+VD VV P + +P+ D+
Sbjct: 148 LVAGPNSKAYGRLTVMAQYYCQVIPVLEVPPSAFTPPPKVDSAVVRLVPHSTKPYPVKDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V +L V P +R +SV
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VEVLTELGVDPTMRAENISV---A 255
Query: 118 QICLAYRDMCEEMP 131
Q C + E P
Sbjct: 256 QYCKMANYLAENAP 269
>gi|417551041|ref|ZP_12202120.1| dimethyladenosine transferase [Acinetobacter baumannii Naval-18]
gi|417565614|ref|ZP_12216488.1| dimethyladenosine transferase [Acinetobacter baumannii OIFC143]
gi|421663839|ref|ZP_16103982.1| dimethyladenosine transferase [Acinetobacter baumannii OIFC110]
gi|421697564|ref|ZP_16137122.1| dimethyladenosine transferase [Acinetobacter baumannii WC-692]
gi|395557370|gb|EJG23371.1| dimethyladenosine transferase [Acinetobacter baumannii OIFC143]
gi|400386866|gb|EJP49940.1| dimethyladenosine transferase [Acinetobacter baumannii Naval-18]
gi|404557626|gb|EKA62923.1| dimethyladenosine transferase [Acinetobacter baumannii WC-692]
gi|408712955|gb|EKL58132.1| dimethyladenosine transferase [Acinetobacter baumannii OIFC110]
Length = 270
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 8/117 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPF 59
+ A ++ RLS+M Q +C F +P AF P P+V V P PI
Sbjct: 152 ITAEPNTKEYGRLSVMIQYYCQPTFLFEVPAGAFNPPPKVTSAVFRLVPYEQKPITAKDE 211
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
K + R+V+ +F R+K + SL K L E+A V P+ RP L++ EF
Sbjct: 212 KALARLVAHVFTQRRKTLRN--SL-----KGMLAEDGFEKARVDPMARPETLTLAEF 261
>gi|50086027|ref|YP_047537.1| dimethyladenosine transferase [Acinetobacter sp. ADP1]
gi|62900521|sp|Q6F8A0.1|RSMA_ACIAD RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|49532003|emb|CAG69715.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase,
kasugamycin resistance [Acinetobacter sp. ADP1]
Length = 274
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 8/117 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPF 59
+ A ++ RLS+M Q +C F +P AF P P+V V P + PI+
Sbjct: 156 ITAEPNTKEYGRLSVMIQYFCQPTFLFEVPAGAFNPPPKVTSAVFRLVPYKEKPIVAKDE 215
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
K + R+V +F R+K + K L ++A + P+ RP L++ +F
Sbjct: 216 KALSRLVGHVFTQRRKTLRN-------SLKGMLADDAFDKAGIDPMARPETLTLAQF 265
>gi|416157969|ref|ZP_11605408.1| dimethyladenosine transferase [Moraxella catarrhalis 101P30B1]
gi|416222595|ref|ZP_11626199.1| dimethyladenosine transferase [Moraxella catarrhalis 103P14B1]
gi|416234438|ref|ZP_11629823.1| dimethyladenosine transferase [Moraxella catarrhalis 12P80B1]
gi|416249650|ref|ZP_11636747.1| dimethyladenosine transferase [Moraxella catarrhalis CO72]
gi|326563671|gb|EGE13923.1| dimethyladenosine transferase [Moraxella catarrhalis 103P14B1]
gi|326565249|gb|EGE15434.1| dimethyladenosine transferase [Moraxella catarrhalis 12P80B1]
gi|326573279|gb|EGE23247.1| dimethyladenosine transferase [Moraxella catarrhalis 101P30B1]
gi|326575822|gb|EGE25745.1| dimethyladenosine transferase [Moraxella catarrhalis CO72]
Length = 284
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 9/120 (7%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPF 59
+ A ++ RLS++ Q +C D+ T+P AF P P+V V TP + PI +
Sbjct: 155 ITAEPNSKEYGRLSVIMQYYCQSDYLLTVPKGAFNPPPKVTSAVFRLTPYKTKPITAMDE 214
Query: 60 KLIERVVSCIFRYRQKQ---VYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+ VV F +R+K ++K LL L S E+ + P RP L V EF
Sbjct: 215 SVFALVVRESFNHRRKTLRAIFKANGLL-----PTLDESDFEKIGINPSARPETLCVHEF 269
>gi|268590578|ref|ZP_06124799.1| dimethyladenosine transferase [Providencia rettgeri DSM 1131]
gi|291313966|gb|EFE54419.1| dimethyladenosine transferase [Providencia rettgeri DSM 1131]
Length = 269
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 6/104 (5%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A G + RLS+M Q +CNV +P AF P P+VD +V P +P+ D+
Sbjct: 148 LVAGPGSKAFGRLSVMAQYYCNVVPVLEVPPTAFTPAPKVDSAIVRLIPHRENPYPVKDI 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRK-RQLVVSLLERA 100
K + R+ + F R+K + LF + +L + L RA
Sbjct: 208 --KFLSRITTQAFNQRRKTIRNSLGDLFSVEELTELGIDLSTRA 249
>gi|450139530|ref|ZP_21872565.1| dimethyladenosine transferase [Streptococcus mutans NLML1]
gi|449232846|gb|EMC31940.1| dimethyladenosine transferase [Streptococcus mutans NLML1]
Length = 291
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 5/118 (4%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ T R P++ + + RV F
Sbjct: 172 LSIAVQYYMTAKVAFIVPRTVFVPAPNVDSAILKMTRREQPLVQVQDEDFFFRVGKATFV 231
Query: 72 YRQKQVYKPASLLFPKRKRQLVVSL---LERACVKPILRPYQLSVQEFGQICLAYRDM 126
+R+K ++ + F K + ++ V L LE A +KP +R L++ +F ++ A R++
Sbjct: 232 HRRKTLWNNLTSHFGKSE-EVKVKLEQALEAADIKPSIRGEALTITDFARLADALREV 288
>gi|139473080|ref|YP_001127795.1| dimethyladenosine transferase [Streptococcus pyogenes str.
Manfredo]
gi|62900490|sp|Q5XDX4.2|RSMA_STRP6 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|166221708|sp|A2RCH2.1|RSMA_STRPG RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|134271326|emb|CAM29544.1| dimethyladenosine transferase [Streptococcus pyogenes str.
Manfredo]
Length = 290
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 7/119 (5%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ R P+I++ + RV F
Sbjct: 172 LSIAVQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRDQPLIEIKDEDFFFRVSRLSFV 231
Query: 72 YRQKQVYKPASLLFPKRKRQLVVSLLER----ACVKPILRPYQLSVQEFGQICLAYRDM 126
+R+K ++ + F K + + + LE+ A +KP +R LS+Q+FG++ A +++
Sbjct: 232 HRRKTLWNNLTSHFGKSED--IKTKLEKGLALADIKPSIRGEALSIQDFGKLADALKEV 288
>gi|449957320|ref|ZP_21809567.1| dimethyladenosine transferase [Streptococcus mutans 4VF1]
gi|449170456|gb|EMB73164.1| dimethyladenosine transferase [Streptococcus mutans 4VF1]
Length = 291
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 5/118 (4%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ T R P++ + + RV F
Sbjct: 172 LSIAVQYYMTAKVAFIVPRTVFVPAPNVDSAILKMTRREQPLVQVQDEDFFFRVGKATFV 231
Query: 72 YRQKQVYKPASLLFPKRKRQLVVSL---LERACVKPILRPYQLSVQEFGQICLAYRDM 126
+R+K ++ + F K + ++ V L LE A +KP +R L++ +F ++ A R++
Sbjct: 232 HRRKTLWNNLTSHFGKSE-EVKVKLEQALEAADIKPSIRGEALTITDFARLADALREV 288
>gi|332686219|ref|YP_004455993.1| dimethyladenosine transferase [Melissococcus plutonius ATCC 35311]
gi|332370228|dbj|BAK21184.1| dimethyladenosine transferase [Melissococcus plutonius ATCC 35311]
Length = 294
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 3/121 (2%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIID-LPFKL 61
A G + LSI Q + F +P F+P+P VD V+ T R PI+D + K
Sbjct: 166 AKPGTKAYGSLSIAVQYFMEATIAFIVPKTVFVPQPNVDSAVIKLTRRSKPIVDVINEKE 225
Query: 62 IERVVSCIFRYRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEFGQI 119
++ F+ R+K ++ + K + +Q ++ LE+A + R LS+ EF ++
Sbjct: 226 FFKLTRAAFQLRRKTLWNNLLHFYGKEESTKQWLIKSLEQAEIVASRRGETLSLAEFARL 285
Query: 120 C 120
Sbjct: 286 S 286
>gi|299768749|ref|YP_003730775.1| dimethyladenosine transferase [Acinetobacter oleivorans DR1]
gi|298698837|gb|ADI89402.1| dimethyladenosine transferase [Acinetobacter oleivorans DR1]
Length = 270
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 8/117 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPF 59
+ A ++ RLS+M Q +C F +P AF P P+V V P PI+
Sbjct: 152 ITAEPNTKEYGRLSVMIQYYCQPTFLFEVPAGAFNPPPKVTSAVFRLVPYEQKPIVAKDE 211
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
K + R+V+ +F R+K + SL K + E+A V P+ RP L++ +F
Sbjct: 212 KALARLVAHVFTQRRKTLRN--SL-----KGMIADDGFEKAGVNPMARPETLTLAQF 261
>gi|449881327|ref|ZP_21784395.1| dimethyladenosine transferase [Streptococcus mutans SA38]
gi|449926135|ref|ZP_21800607.1| dimethyladenosine transferase [Streptococcus mutans 4SM1]
gi|449160912|gb|EMB64142.1| dimethyladenosine transferase [Streptococcus mutans 4SM1]
gi|449251561|gb|EMC49571.1| dimethyladenosine transferase [Streptococcus mutans SA38]
Length = 291
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 13/122 (10%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPII-----DLPFKLIERVVS 67
LSI Q + F +P F+P P VD ++ T R P++ D F RV
Sbjct: 172 LSIAVQYYMTAKVAFIVPRTVFVPAPNVDSAILKMTRREQPLVQVQDEDFFF----RVGK 227
Query: 68 CIFRYRQKQVYKPASLLFPKRKRQLVVSL---LERACVKPILRPYQLSVQEFGQICLAYR 124
F +R+K ++ + F K + ++ V L LE A +KP +R L++ +F ++ A R
Sbjct: 228 AAFVHRRKTLWNNLTSHFGKSE-EVKVKLEQALEAADIKPSIRGEALTITDFARLADALR 286
Query: 125 DM 126
++
Sbjct: 287 EV 288
>gi|291616236|ref|YP_003518978.1| KsgA [Pantoea ananatis LMG 20103]
gi|378768585|ref|YP_005197058.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Pantoea ananatis LMG 5342]
gi|386014629|ref|YP_005932905.1| Dimethyladenosine transferase KsgA [Pantoea ananatis AJ13355]
gi|386080702|ref|YP_005994227.1| dimethyladenosine transferase KsgA [Pantoea ananatis PA13]
gi|291151266|gb|ADD75850.1| KsgA [Pantoea ananatis LMG 20103]
gi|327392687|dbj|BAK10109.1| Dimethyladenosine transferase KsgA [Pantoea ananatis AJ13355]
gi|354989883|gb|AER34007.1| dimethyladenosine transferase KsgA [Pantoea ananatis PA13]
gi|365188071|emb|CCF11021.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Pantoea ananatis LMG 5342]
Length = 273
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 62/132 (46%), Gaps = 12/132 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A G + RLS+M Q +C V +P +F P P+VD VV P + HP+ D+
Sbjct: 148 LVAGPGSKAYGRLSVMAQYYCQVIPVLEVPPHSFTPPPKVDSAVVRLVPYMTPPHPVKDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + S + +V L+ + LR +SV ++
Sbjct: 208 --RILSRITTEAFGQRRKTLRNSLSHM-------VVAGALDELEIDTSLRAENVSVAQYC 258
Query: 118 QICLAYRDMCEE 129
Q+ D ++
Sbjct: 259 QLANWLADHLDQ 270
>gi|152973889|ref|YP_001373406.1| dimethyladenosine transferase [Bacillus cytotoxicus NVH 391-98]
gi|189028800|sp|A7GJV3.1|RSMA_BACCN RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|152022641|gb|ABS20411.1| dimethyladenosine transferase [Bacillus cytotoxicus NVH 391-98]
Length = 292
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 58/126 (46%), Gaps = 5/126 (3%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIID-LPF 59
+ A G + LSI Q + V+ T+P F+P+P VD V+ R PI++ +
Sbjct: 161 LAAKPGTKDYGSLSIAIQYYTEVETVMTVPRTVFVPQPNVDSSVIRLLKRPKPIVEVIDE 220
Query: 60 KLIERVVSCIFRYRQKQVYKPASLL---FPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
K VV F R+K + S FPK K +L+ +L + P R LS++EF
Sbjct: 221 KFFFEVVRASFAQRRKTLMNNLSNNLNDFPKDK-ELLERILTEIGIDPKRRGETLSIEEF 279
Query: 117 GQICLA 122
+ A
Sbjct: 280 AMLSNA 285
>gi|450051682|ref|ZP_21840969.1| dimethyladenosine transferase [Streptococcus mutans NFSM1]
gi|449201694|gb|EMC02677.1| dimethyladenosine transferase [Streptococcus mutans NFSM1]
Length = 291
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 5/118 (4%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ T R P++ + + RV F
Sbjct: 172 LSIAVQYYMTAKIAFIVPRTVFVPAPNVDSAILKMTRREQPLVQVQDEDFFFRVGKAAFV 231
Query: 72 YRQKQVYKPASLLFPKRKRQLVVSL---LERACVKPILRPYQLSVQEFGQICLAYRDM 126
+R+K ++ + F K + ++ V L LE A +KP +R L++ +F ++ A R++
Sbjct: 232 HRRKTLWNNLTSHFGKSE-EVKVKLEQALEAADIKPSIRGEALTITDFARLADALREV 288
>gi|50913600|ref|YP_059572.1| dimethyladenosine transferase [Streptococcus pyogenes MGAS10394]
gi|50902674|gb|AAT86389.1| Dimethyladenosine transferase [Streptococcus pyogenes MGAS10394]
Length = 298
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 7/119 (5%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ R P+I++ + RV F
Sbjct: 180 LSIAVQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRDQPLIEIKDEDFFFRVSRLSFV 239
Query: 72 YRQKQVYKPASLLFPKRKRQLVVSLLER----ACVKPILRPYQLSVQEFGQICLAYRDM 126
+R+K ++ + F K + + + LE+ A +KP +R LS+Q+FG++ A +++
Sbjct: 240 HRRKTLWNNLTSHFGKSED--IKTKLEKGLALADIKPSIRGEALSIQDFGKLADALKEV 296
>gi|308448554|ref|XP_003087684.1| hypothetical protein CRE_15249 [Caenorhabditis remanei]
gi|308253631|gb|EFO97583.1| hypothetical protein CRE_15249 [Caenorhabditis remanei]
Length = 131
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 8/117 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPF 59
+ A+ ++ RLS+M Q +C F +P +F P P+V V P PI+
Sbjct: 13 ITASPNTKEYGRLSVMIQYFCKPTFLFEVPPGSFNPPPKVTSAVFRLEPYATKPIVAKSE 72
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
K + R+VS +F R+K + K L+ E A V P+ RP L++ +F
Sbjct: 73 KALARLVSHVFTQRRKTLRN-------SLKGMLLEDGFENAGVDPMARPETLTLAQF 122
>gi|384494579|gb|EIE85070.1| hypothetical protein RO3G_09780 [Rhizopus delemar RA 99-880]
Length = 296
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+IA +R RLS+M Q+ NV + +P F+P+P+VD V+ F+P+ D+ K
Sbjct: 162 IIANTSTSKRGRLSVMTQSLYNVREVYKVPSTIFVPRPKVDATVIQFSPKPFFATDVEMK 221
Query: 61 ----LIERVVSCIFRYRQKQV 77
+E ++ F R+K +
Sbjct: 222 GSYTTLEDLLRIYFTKRRKTM 242
>gi|343494310|ref|ZP_08732572.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Vibrio nigripulchritudo ATCC 27043]
gi|342825215|gb|EGU59714.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Vibrio nigripulchritudo ATCC 27043]
Length = 269
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 58/121 (47%), Gaps = 16/121 (13%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF- 59
+ A G + RL++M Q +C V +P AF+P P+VD VV R+ P +LP+
Sbjct: 147 LAAAPGSKAYGRLTVMAQYFCKVVPVLEVPPTAFVPPPKVDSAVV----RLMPYEELPYP 202
Query: 60 ----KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQE 115
K ++RV F R+K V L L +LE V P +RP L++++
Sbjct: 203 AKSLKWLDRVCREGFNQRRKTVRNCYKGL-------LSQEVLEELGVNPSMRPENLTLEQ 255
Query: 116 F 116
F
Sbjct: 256 F 256
>gi|418324798|ref|ZP_12936024.1| dimethyladenosine transferase [Staphylococcus pettenkoferi VCU012]
gi|365224121|gb|EHM65388.1| dimethyladenosine transferase [Staphylococcus pettenkoferi VCU012]
Length = 296
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 11/124 (8%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLP---- 58
A G + LSI+ Q + T+P F+P P VD VV R +P ID+
Sbjct: 165 AQVGTKAYGSLSIVAQYYTETSKVLTVPKTVFMPPPNVDSIVVKLMQRPYPQIDIDDEDR 224
Query: 59 -FKLIERVVSCIFRYRQKQVYKPASLLF--PKRKRQLVVSLLERACVKPILRPYQLSVQE 115
FK+ + F R+K + LF K+ ++++ + LE A + P R L+++E
Sbjct: 225 FFKMTK----GAFTQRRKTINNNYQSLFVDGKKHKKVITAWLEAANIDPKRRGETLTIEE 280
Query: 116 FGQI 119
F +
Sbjct: 281 FATL 284
>gi|262281588|ref|ZP_06059366.1| dimethyladenosine transferase [Acinetobacter calcoaceticus RUH2202]
gi|262256964|gb|EEY75704.1| dimethyladenosine transferase [Acinetobacter calcoaceticus RUH2202]
Length = 270
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 54/117 (46%), Gaps = 8/117 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPF 59
+ A ++ RLS+M Q +C F +P AF P P+V V P PII
Sbjct: 152 ITAEPNTKEYGRLSVMIQYYCQPTFLFEVPAGAFNPPPKVTSAVFRLVPYEQKPIIAKDE 211
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
K + R+V +F R+K + SL K + E+A V P+ RP L++ +F
Sbjct: 212 KALARLVGHVFTQRRKTLRN--SL-----KGMIAEDGFEKAGVDPMARPETLTLTQF 261
>gi|330444319|ref|YP_004377305.1| dimethyladenosine transferase [Chlamydophila pecorum E58]
gi|328807429|gb|AEB41602.1| dimethyladenosine transferase [Chlamydophila pecorum E58]
Length = 280
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 4/117 (3%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVH-PIIDLPF 59
+IA G + L+I Q + +V + F + F P+PQV VVH + H P+ + F
Sbjct: 157 IIAQPGNKDYGSLTIFLQFFAHVRYAFKVRASCFYPQPQVHSAVVHMEVKEHFPLPETVF 216
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
K + F+ R+K + LFPK +L++S L++ + RP LS++++
Sbjct: 217 KDFFTLTRTAFQQRRKYLTNTLKDLFPK---ELLLSALQQLRISDKARPETLSLEDY 270
>gi|424741868|ref|ZP_18170204.1| dimethyladenosine transferase [Acinetobacter baumannii WC-141]
gi|422944465|gb|EKU39460.1| dimethyladenosine transferase [Acinetobacter baumannii WC-141]
Length = 270
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 54/117 (46%), Gaps = 8/117 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPF 59
+ A ++ RLS+M Q +C F +P AF P P+V V P PII
Sbjct: 152 ITAEPNTKEYGRLSVMIQYYCQPTFLFEVPAGAFNPPPKVTSAVFRLVPYEQKPIIAKDE 211
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
K + R+V +F R+K + SL K + E+A V P+ RP L++ +F
Sbjct: 212 KALARLVGHVFTQRRKTLRN--SL-----KGMIAEDGFEKAGVDPMARPETLTLAQF 261
>gi|227432115|ref|ZP_03914127.1| dimethyladenosine transferase [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
gi|227352142|gb|EEJ42356.1| dimethyladenosine transferase [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
Length = 303
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 6/127 (4%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPFKL 61
A G + L++ Q + +P +F P P VD VV TP + I++ KL
Sbjct: 174 AAVGTKSYGVLTLTIQYFAQATLAIKVPASSFNPSPNVDSAVVKLTPLKPTTIVENVGKL 233
Query: 62 IERVVSCIFRYRQKQVYKPASLLFPK---RKRQLVVSLLERACVKPILRPYQLSVQEFGQ 118
V+ F +R+K ++ + K K QL V+ L+ A + P +R +L++++F Q
Sbjct: 234 F-GVIKGSFSHRRKSLWNNMLQTYGKDAGTKEQLTVA-LKSAQIDPAIRAERLNLEQFTQ 291
Query: 119 ICLAYRD 125
+ L RD
Sbjct: 292 LYLVLRD 298
>gi|146310264|ref|YP_001175338.1| dimethyladenosine transferase [Enterobacter sp. 638]
gi|166987694|sp|A4W6F7.1|RSMA_ENT38 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|145317140|gb|ABP59287.1| dimethyladenosine transferase [Enterobacter sp. 638]
Length = 273
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 57/123 (46%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +C + +P AF P P+V+ VV P HP+ +L
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCQIIPVLEVPPTAFTPAPKVESAVVRLVPHAVMPHPVKEL 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + F V +L + P +R +SV+++
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLGNTF-------TVDVLTELGIDPAMRAENISVEQYC 258
Query: 118 QIC 120
++
Sbjct: 259 KLA 261
>gi|449935656|ref|ZP_21803511.1| dimethyladenosine transferase [Streptococcus mutans 2ST1]
gi|450078135|ref|ZP_21850840.1| dimethyladenosine transferase [Streptococcus mutans N3209]
gi|450155730|ref|ZP_21878437.1| dimethyladenosine transferase [Streptococcus mutans 21]
gi|449166325|gb|EMB69269.1| dimethyladenosine transferase [Streptococcus mutans 2ST1]
gi|449210357|gb|EMC10821.1| dimethyladenosine transferase [Streptococcus mutans N3209]
gi|449236792|gb|EMC35692.1| dimethyladenosine transferase [Streptococcus mutans 21]
Length = 291
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 5/118 (4%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ T R P++ + + RV F
Sbjct: 172 LSIAVQYYMTAKVAFIVPRTVFVPAPNVDSAILKMTRREQPLVQVQDEDFFFRVGKAAFV 231
Query: 72 YRQKQVYKPASLLFPKRKRQLVVSL---LERACVKPILRPYQLSVQEFGQICLAYRDM 126
+R+K ++ + F K + ++ V L LE A +KP +R L++ +F ++ A R++
Sbjct: 232 HRRKTLWNNLTSHFGKSE-EVKVKLEQALEAADIKPSIRGEALTITDFARLADALREV 288
>gi|306832261|ref|ZP_07465415.1| dimethyladenosine transferase [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|304425700|gb|EFM28818.1| dimethyladenosine transferase [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
Length = 290
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 3/117 (2%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ T R P++ + + RV F
Sbjct: 172 LSIAVQYYMTAKVAFVVPRTVFVPAPNVDSAILKMTRREQPLVQVKDEDFFFRVSKISFV 231
Query: 72 YRQKQVYKPASLLFPK--RKRQLVVSLLERACVKPILRPYQLSVQEFGQICLAYRDM 126
+R+K ++ + F K + + LE A +KP +R LS+ EF ++ A +++
Sbjct: 232 HRRKTLWNNLTSHFGKADETKAKLEQALEIAEIKPSIRGEALSIAEFAKLADALKEV 288
>gi|449877012|ref|ZP_21783091.1| dimethyladenosine transferase [Streptococcus mutans S1B]
gi|449991610|ref|ZP_21821940.1| dimethyladenosine transferase [Streptococcus mutans NVAB]
gi|449180887|gb|EMB83020.1| dimethyladenosine transferase [Streptococcus mutans NVAB]
gi|449251422|gb|EMC49434.1| dimethyladenosine transferase [Streptococcus mutans S1B]
Length = 291
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 5/118 (4%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ T R P++ + + RV F
Sbjct: 172 LSIAVQYYMTAKVAFIVPRTVFVPAPNVDSAILKMTRREQPLVQVQDEDFFFRVGKAAFV 231
Query: 72 YRQKQVYKPASLLFPKRKRQLVVSL---LERACVKPILRPYQLSVQEFGQICLAYRDM 126
+R+K ++ + F K + ++ V L LE A +KP +R L++ +F ++ A R++
Sbjct: 232 HRRKTLWNNLTSHFGKSE-EVKVKLEQALEAADIKPSIRGEALTITDFARLADALREV 288
>gi|312113661|ref|YP_004011257.1| dimethyladenosine transferase [Rhodomicrobium vannielii ATCC 17100]
gi|311218790|gb|ADP70158.1| dimethyladenosine transferase [Rhodomicrobium vannielii ATCC 17100]
Length = 287
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 55/122 (45%), Gaps = 5/122 (4%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A G + RL+++ Q FT+P F P P+V +V PR +P
Sbjct: 164 LVADVGSDHYGRLAVIAQFRARARILFTLPPSVFTPPPKVASALVEIVPRPQAPDAVPTS 223
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
+ERV + F R+K + + L R LL A + P R +L+V++F ++
Sbjct: 224 WLERVTAAAFGQRRKMLRSSLASLGADTAR-----LLADAGIDPAERAERLTVEDFIRLA 278
Query: 121 LA 122
A
Sbjct: 279 QA 280
>gi|253730960|ref|ZP_04865125.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253735227|ref|ZP_04869392.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
TCH130]
gi|297207404|ref|ZP_06923843.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|300910363|ref|ZP_07127816.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
TCH70]
gi|304380509|ref|ZP_07363186.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
ATCC BAA-39]
gi|384861154|ref|YP_005743874.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
str. JKD6008]
gi|386728249|ref|YP_006194632.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
71193]
gi|418980458|ref|ZP_13528239.1| Dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
DR10]
gi|421150854|ref|ZP_15610506.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
str. Newbould 305]
gi|422742513|ref|ZP_16796517.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
MRSA177]
gi|422747266|ref|ZP_16801184.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
MRSA131]
gi|424768333|ref|ZP_18195618.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CM05]
gi|253725310|gb|EES94039.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253726787|gb|EES95516.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
TCH130]
gi|296887967|gb|EFH26861.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|300888352|gb|EFK83539.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
TCH70]
gi|302750383|gb|ADL64560.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
str. JKD6008]
gi|304340954|gb|EFM06877.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
ATCC BAA-39]
gi|320139421|gb|EFW31299.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
MRSA131]
gi|320144198|gb|EFW35966.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
MRSA177]
gi|379991783|gb|EIA13247.1| Dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
DR10]
gi|384229542|gb|AFH68789.1| Dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
71193]
gi|394329074|gb|EJE55197.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
str. Newbould 305]
gi|402348607|gb|EJU83588.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CM05]
Length = 303
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 11/124 (8%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLP---- 58
A G + LSI+ Q + T+P F+P P VD VV R P++ +
Sbjct: 172 AEVGSKAYGSLSIVVQYYTETSKVLTVPKSVFMPPPNVDSIVVKLMQRTEPLVTVDNEEA 231
Query: 59 -FKLIERVVSCIFRYRQKQVYKPASLLFP--KRKRQLVVSLLERACVKPILRPYQLSVQE 115
FKL F R+K + F K+ +++++ LE+A + P R LS+Q+
Sbjct: 232 FFKL----AKAAFAQRRKTINNNYQNYFKDGKQHKEVILQWLEQAGIDPRRRGETLSIQD 287
Query: 116 FGQI 119
F ++
Sbjct: 288 FAKL 291
>gi|374292280|ref|YP_005039315.1| Dimethyladenosine transferase [Azospirillum lipoferum 4B]
gi|357424219|emb|CBS87086.1| Dimethyladenosine transferase [Azospirillum lipoferum 4B]
Length = 300
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A G + RLS++ Q + F +P +AF P P+V+ VVH TPR +P ++
Sbjct: 171 LVAKPGSKAYGRLSVITQWRSDARVLFNLPPRAFTPPPKVESTVVHLTPRANP-EPADWR 229
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSV 113
+E+V + F R+K + + L +LLE + P R ++ V
Sbjct: 230 ALEQVTAAAFGQRRKMLRQSLKSLGNAE------ALLEETGLTPTARAEEIDV 276
>gi|450045200|ref|ZP_21838322.1| dimethyladenosine transferase [Streptococcus mutans N34]
gi|449200680|gb|EMC01702.1| dimethyladenosine transferase [Streptococcus mutans N34]
Length = 291
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 5/118 (4%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ T R P++ + + RV F
Sbjct: 172 LSIAVQYYMTAKVAFIVPRTVFVPAPNVDSAILKMTRREQPLVQVQDEDFFFRVSKAAFV 231
Query: 72 YRQKQVYKPASLLFPKRKRQLVVSL---LERACVKPILRPYQLSVQEFGQICLAYRDM 126
+R+K ++ + F K + ++ V L LE A +KP +R L++ +F ++ A R++
Sbjct: 232 HRRKTLWNNLTSHFGKSE-EVKVKLEQALEAADLKPSIRGEALTITDFARLADALREV 288
>gi|398382048|ref|ZP_10540147.1| dimethyladenosine transferase [Rhizobium sp. AP16]
gi|397718148|gb|EJK78741.1| dimethyladenosine transferase [Rhizobium sp. AP16]
Length = 275
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 55/116 (47%), Gaps = 8/116 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A E + RL ++C F I +AF P P+V VVH TPR +P I
Sbjct: 161 IVADEDDDHYGRLGVLCGWRTQAHMAFDISPQAFSPPPKVTSTVVHLTPRENP-IPCSVD 219
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+E+V F R+K + + L + +LL++A + P R LSV+EF
Sbjct: 220 KLEKVTQAAFGQRRKMLRQSLKPLGGE-------TLLQKADIDPQRRAETLSVEEF 268
>gi|227552435|ref|ZP_03982484.1| dimethyladenosine transferase [Enterococcus faecium TX1330]
gi|257888325|ref|ZP_05667978.1| dimethyladenosine transferase [Enterococcus faecium 1,141,733]
gi|257896785|ref|ZP_05676438.1| dimethyladenosine transferase [Enterococcus faecium Com12]
gi|293378583|ref|ZP_06624746.1| dimethyladenosine transferase [Enterococcus faecium PC4.1]
gi|424762165|ref|ZP_18189686.1| dimethyladenosine transferase [Enterococcus faecalis TX1337RF]
gi|431040118|ref|ZP_19492625.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E1590]
gi|431751113|ref|ZP_19539806.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E2620]
gi|431758091|ref|ZP_19546719.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E3083]
gi|431763552|ref|ZP_19552101.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E3548]
gi|227178447|gb|EEI59419.1| dimethyladenosine transferase [Enterococcus faecium TX1330]
gi|257824379|gb|EEV51311.1| dimethyladenosine transferase [Enterococcus faecium 1,141,733]
gi|257833350|gb|EEV59771.1| dimethyladenosine transferase [Enterococcus faecium Com12]
gi|292642912|gb|EFF61059.1| dimethyladenosine transferase [Enterococcus faecium PC4.1]
gi|402425293|gb|EJV57442.1| dimethyladenosine transferase [Enterococcus faecium TX1337RF]
gi|430561970|gb|ELB01223.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E1590]
gi|430615930|gb|ELB52862.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E2620]
gi|430617754|gb|ELB54618.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E3083]
gi|430621925|gb|ELB58666.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E3548]
Length = 294
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 3/120 (2%)
Query: 6 GMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF-KLIER 64
G + LSI Q + F +P F+P+P VD ++ T R P +++ K R
Sbjct: 169 GTKAYGSLSIAVQYYMEASLAFIVPKTVFVPQPNVDSAILKLTRRDTPAVEVTDEKAFFR 228
Query: 65 VVSCIFRYRQKQVYKPASLLFPK--RKRQLVVSLLERACVKPILRPYQLSVQEFGQICLA 122
+ F+ R+K ++ + K + + + LE A + P R LS+QEF + A
Sbjct: 229 LTKAAFQQRRKTLWNNLQHSYGKDDQTKTWLSKSLETAGIDPKRRGETLSLQEFAALSNA 288
>gi|82750200|ref|YP_415941.1| dimethyladenosine transferase [Staphylococcus aureus RF122]
gi|82655731|emb|CAI80130.1| dimethyladenosine transferase [Staphylococcus aureus RF122]
Length = 303
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 11/124 (8%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLP---- 58
A G + LSI+ Q + T+P F+P P VD VV R P++ +
Sbjct: 172 AEVGSKAYGSLSIVVQYYTETSKVLTVPKSVFMPPPNVDSIVVKLMQRTEPLVTVDNEEA 231
Query: 59 -FKLIERVVSCIFRYRQKQVYKPASLLFP--KRKRQLVVSLLERACVKPILRPYQLSVQE 115
FKL F R+K + F K+ +++++ LE+A + P R LS+Q+
Sbjct: 232 FFKL----AKAAFAQRRKTINNNYQNYFKDGKQHKEVILQWLEQAGIDPRRRGETLSIQD 287
Query: 116 FGQI 119
F ++
Sbjct: 288 FAKL 291
>gi|251793858|ref|YP_003008590.1| dimethyladenosine transferase [Aggregatibacter aphrophilus NJ8700]
gi|422337183|ref|ZP_16418155.1| ribosomal RNA small subunit methyltransferase A [Aggregatibacter
aphrophilus F0387]
gi|247535257|gb|ACS98503.1| dimethyladenosine transferase [Aggregatibacter aphrophilus NJ8700]
gi|353345735|gb|EHB90026.1| ribosomal RNA small subunit methyltransferase A [Aggregatibacter
aphrophilus F0387]
Length = 287
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 63/148 (42%), Gaps = 28/148 (18%)
Query: 12 RLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDLPFKLIERVVSC 68
RL+IM Q +C V +P AF P P+VD VV P HP+ DL + + RV S
Sbjct: 164 RLTIMAQYFCQVMPVLEVPPSAFKPAPKVDSAVVRLIPHAILPHPVKDLYW--LNRVCSQ 221
Query: 69 IFRYRQKQVYKPASLLF-PKRKRQLVVSLLERACVKPILRPYQLSVQEFGQICLAYRDMC 127
F R+K + S LF P+ L + L RA LS+ ++ ++
Sbjct: 222 AFNQRRKTLRNALSDLFLPENLTALNIDLNARA--------ENLSIADYARLA------- 266
Query: 128 EEMPGLYEYTLEDTPGDIEPEAVAEQEG 155
+ ++ P D+ + V + E
Sbjct: 267 -------NWLADNPPADVNKDDVMDSEA 287
>gi|126739404|ref|ZP_01755097.1| dimethyladenosine transferase [Roseobacter sp. SK209-2-6]
gi|126719504|gb|EBA16213.1| dimethyladenosine transferase [Roseobacter sp. SK209-2-6]
Length = 291
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 53/116 (45%), Gaps = 5/116 (4%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A G + RL+++ Q + +P +AF P P+V VVH T P
Sbjct: 170 IVAQPGSKAYGRLALLAQWRADARIVLALPPEAFSPPPKVHSAVVHLTALAEPRYPADAA 229
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+ RV++ F R+K + + P + L+ A +KP R Q+S++EF
Sbjct: 230 TLSRVIAAAFNQRRKMLRASLKSVAPNIEDHLIA-----AGIKPTERAEQVSLEEF 280
>gi|450176911|ref|ZP_21886087.1| dimethyladenosine transferase [Streptococcus mutans SM1]
gi|449244380|gb|EMC42757.1| dimethyladenosine transferase [Streptococcus mutans SM1]
Length = 291
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 5/118 (4%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ T R P++ + + RV F
Sbjct: 172 LSIAVQYYMTAKVAFIVPRTVFVPAPNVDSAILKMTRREQPLVQVQDEDFFFRVSKAAFV 231
Query: 72 YRQKQVYKPASLLFPKRKRQLVVSL---LERACVKPILRPYQLSVQEFGQICLAYRDM 126
+R+K ++ + F K + ++ V L LE A +KP +R L++ +F ++ A R++
Sbjct: 232 HRRKTLWNNLTSHFGKSE-EVKVKLEQALEAADLKPSIRGEALTITDFARLADALREV 288
>gi|294678211|ref|YP_003578826.1| dimethyladenosine transferase [Rhodobacter capsulatus SB 1003]
gi|294477031|gb|ADE86419.1| dimethyladenosine transferase [Rhodobacter capsulatus SB 1003]
Length = 280
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 5/116 (4%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A G + RL+++ Q +P +AF P P+V VVH T P
Sbjct: 160 IVAKPGTDHYGRLALLAQWRAEAKIVMVLPPEAFTPAPKVHSAVVHLTALPAPRYPADPA 219
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
++ERVV+ F R+K + + P+ + +LLE A + P R ++S+++F
Sbjct: 220 VLERVVAAGFNQRRKMLRSSLKGVHPR-----IDALLEEAGIPPTERAERVSLEQF 270
>gi|222085448|ref|YP_002543978.1| dimethyladenosine transferase [Agrobacterium radiobacter K84]
gi|221722896|gb|ACM26052.1| dimethyladenosine transferase [Agrobacterium radiobacter K84]
Length = 276
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 55/116 (47%), Gaps = 8/116 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A E + RL ++C F I +AF P P+V VVH TPR +P I
Sbjct: 162 IVADEDDDHYGRLGVLCGWRTQAHMAFDISPQAFSPPPKVTSTVVHLTPRENP-IPCSVD 220
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+E+V F R+K + + L + +LL++A + P R LSV+EF
Sbjct: 221 KLEKVTQAAFGQRRKMLRQSLKPLGGE-------TLLQKADIDPQRRAETLSVEEF 269
>gi|116511486|ref|YP_808702.1| dimethyladenosine transferase [Lactococcus lactis subsp. cremoris
SK11]
gi|385838871|ref|YP_005876501.1| Dimethyladenosine transferase [Lactococcus lactis subsp. cremoris
A76]
gi|414073906|ref|YP_006999123.1| dimethyladenosine transferase [Lactococcus lactis subsp. cremoris
UC509.9]
gi|116107140|gb|ABJ72280.1| dimethyladenosine transferase [Lactococcus lactis subsp. cremoris
SK11]
gi|358750099|gb|AEU41078.1| Dimethyladenosine transferase [Lactococcus lactis subsp. cremoris
A76]
gi|413973826|gb|AFW91290.1| dimethyladenosine transferase [Lactococcus lactis subsp. cremoris
UC509.9]
Length = 294
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 1/111 (0%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF-KLIERVVSCIFR 71
LSI Q + F +P FIP P VD ++ R P++++ + + + F
Sbjct: 178 LSIAVQYYMEASVAFIVPRTVFIPAPNVDSAILKMVRREEPLVEVEDEEWFFKTMHSSFV 237
Query: 72 YRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQICLA 122
+R+K + F K + + LL +A + P +R LS++EF ++ A
Sbjct: 238 HRRKTLMNNMQAAFGKESKPEIEKLLAQAEISPTIRGEALSIEEFAKLADA 288
>gi|288906214|ref|YP_003431436.1| dimethyladenosine transferase [Streptococcus gallolyticus UCN34]
gi|325979187|ref|YP_004288903.1| dimethyladenosine transferase [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|386338656|ref|YP_006034825.1| dimethyladenosine transferase [Streptococcus gallolyticus subsp.
gallolyticus ATCC 43143]
gi|288732940|emb|CBI14519.1| dimethyladenosine transferase [Streptococcus gallolyticus UCN34]
gi|325179115|emb|CBZ49159.1| dimethyladenosine transferase [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|334281292|dbj|BAK28866.1| dimethyladenosine transferase [Streptococcus gallolyticus subsp.
gallolyticus ATCC 43143]
Length = 290
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 3/117 (2%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ T R P++ + + RV F
Sbjct: 172 LSIAVQYYMTAKVAFVVPRTVFVPAPNVDSAILKMTRREQPLVQVKDEDFFFRVSKISFV 231
Query: 72 YRQKQVYKPASLLFPK--RKRQLVVSLLERACVKPILRPYQLSVQEFGQICLAYRDM 126
+R+K ++ + F K + + LE A +KP +R LS+ EF ++ A +++
Sbjct: 232 HRRKTLWNNLTSHFGKADETKAKLEQALEIAEIKPSIRGEALSIAEFAKLADALKEV 288
>gi|86134822|ref|ZP_01053404.1| ribosomal RNA adenine dimethylase [Polaribacter sp. MED152]
gi|85821685|gb|EAQ42832.1| ribosomal RNA adenine dimethylase [Polaribacter sp. MED152]
Length = 267
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 59/114 (51%), Gaps = 12/114 (10%)
Query: 5 EGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFKLIER 64
EG + LS++ Q + +V++ FT+P F P P+VD GV+ + + + KL R
Sbjct: 152 EGSKVYGILSVLTQAFFDVEYLFTVPPTVFNPPPKVDSGVIRLIRKKDYSLPVDEKLFFR 211
Query: 65 VVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPIL--RPYQLSVQEF 116
VV F R+K + +SL + +L SL E PI RP QLSVQEF
Sbjct: 212 VVKTAFNQRRKMLR--SSL----KSFKLSDSLKE----DPIFARRPEQLSVQEF 255
>gi|387786808|ref|YP_006251904.1| dimethyladenosine transferase [Streptococcus mutans LJ23]
gi|379133209|dbj|BAL69961.1| dimethyladenosine transferase [Streptococcus mutans LJ23]
Length = 291
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 5/118 (4%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ T R P++ + + RV F
Sbjct: 172 LSIAVQYYMTAKVAFIVPRTVFVPAPNVDSAILKMTRREQPLVQVQDEDFFFRVSKAAFV 231
Query: 72 YRQKQVYKPASLLFPKRKRQLVVSL---LERACVKPILRPYQLSVQEFGQICLAYRDM 126
+R+K ++ + F K + ++ V L LE A +KP +R L++ +F ++ A R++
Sbjct: 232 HRRKTLWNNLTSHFGKSE-EVKVKLEQALEAADLKPSIRGEALTITDFARLADALREV 288
>gi|449974425|ref|ZP_21815287.1| dimethyladenosine transferase [Streptococcus mutans 11VS1]
gi|450097797|ref|ZP_21857657.1| dimethyladenosine transferase [Streptococcus mutans SF1]
gi|450171121|ref|ZP_21883843.1| dimethyladenosine transferase [Streptococcus mutans SM4]
gi|449178368|gb|EMB80634.1| dimethyladenosine transferase [Streptococcus mutans 11VS1]
gi|449222179|gb|EMC21913.1| dimethyladenosine transferase [Streptococcus mutans SF1]
gi|449244499|gb|EMC42872.1| dimethyladenosine transferase [Streptococcus mutans SM4]
Length = 291
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 5/118 (4%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ T R P++ + + RV F
Sbjct: 172 LSIAVQYYMTAKVAFIVPRTVFVPAPNVDSAILKMTRREQPLVQVQDEDFFFRVGKAAFV 231
Query: 72 YRQKQVYKPASLLFPKRKRQLVVSL---LERACVKPILRPYQLSVQEFGQICLAYRDM 126
+R+K ++ + F K + ++ V L LE A +KP +R L++ +F ++ A R++
Sbjct: 232 HRRKTLWNNLTSHFGKSE-EVKVKLEQALEAADIKPSIRGEALTITDFARLADALREV 288
>gi|421077159|ref|ZP_15538130.1| Ribosomal RNA small subunit methyltransferase A [Pelosinus
fermentans JBW45]
gi|392524547|gb|EIW47702.1| Ribosomal RNA small subunit methyltransferase A [Pelosinus
fermentans JBW45]
Length = 280
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 2/120 (1%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
M+A G + LS+ Q + + F +P +FIP P VD V+ T R P +++ +
Sbjct: 158 MVAVPGTKDYGSLSVAVQYYTKPEIMFVVPPASFIPPPAVDSAVIRCTVREKPPVEVNER 217
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
+ RVV F R+K + +L + +LE+A + R LS++EF I
Sbjct: 218 IFFRVVKAAFAQRRKTLSN--TLKTTGVPADTLKVILEKAGIDGGRRGETLSIEEFAAIA 275
>gi|449864829|ref|ZP_21778644.1| dimethyladenosine transferase [Streptococcus mutans U2B]
gi|449870095|ref|ZP_21780454.1| dimethyladenosine transferase [Streptococcus mutans 8ID3]
gi|449157087|gb|EMB60537.1| dimethyladenosine transferase [Streptococcus mutans 8ID3]
gi|449264633|gb|EMC61970.1| dimethyladenosine transferase [Streptococcus mutans U2B]
Length = 291
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 5/118 (4%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ T R P++ + + RV F
Sbjct: 172 LSIAVQYYMTAKVAFIVPRTVFVPAPNVDSAILKMTRREQPLVQVQDEDFFFRVGKAAFV 231
Query: 72 YRQKQVYKPASLLFPKRKRQLVVSL---LERACVKPILRPYQLSVQEFGQICLAYRDM 126
+R+K ++ + F K + ++ V L LE A +KP +R L++ +F ++ A R++
Sbjct: 232 HRRKTLWNNLTSHFGKSE-EVKVKLEQALEAADIKPSIRGEALTITDFARLADALREV 288
>gi|405380013|ref|ZP_11033858.1| dimethyladenosine transferase [Rhizobium sp. CF142]
gi|397323628|gb|EJJ28021.1| dimethyladenosine transferase [Rhizobium sp. CF142]
Length = 275
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 54/119 (45%), Gaps = 14/119 (11%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A+E + RL ++ + F IP +AF P P+V VVH TP +P I
Sbjct: 161 IVASEDDDHYGRLGVLAGWRTHSRMAFDIPPQAFTPPPKVTSTVVHLTPNENP-IPCSVA 219
Query: 61 LIERVVSCIFRYRQK---QVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+E+V F R+K Q KP SLL +A + P R LSV+EF
Sbjct: 220 NLEKVTQAAFGQRRKMLRQSLKPIG----------GESLLTKAGIDPARRAETLSVEEF 268
>gi|374338791|ref|YP_005095508.1| Dimethyladenosine transferase [Streptococcus macedonicus ACA-DC
198]
gi|372284908|emb|CCF03219.1| Dimethyladenosine transferase [Streptococcus macedonicus ACA-DC
198]
Length = 290
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 3/117 (2%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ T R P++ + + RV F
Sbjct: 172 LSIAVQYYMTAKVAFVVPRTVFVPAPNVDSAILTMTRREQPLVQVKDEDFFFRVSKISFV 231
Query: 72 YRQKQVYKPASLLFPKR--KRQLVVSLLERACVKPILRPYQLSVQEFGQICLAYRDM 126
+R+K ++ + F K + + LE A +KP +R LS+ EF ++ A +++
Sbjct: 232 HRRKTLWNNLTSHFGKSDETKAKLEQALEIAEIKPSIRGEALSIAEFAKLADALKEV 288
>gi|333925543|ref|YP_004499122.1| ribosomal RNA small subunit methyltransferase A [Serratia sp. AS12]
gi|333930496|ref|YP_004504074.1| ribosomal RNA small subunit methyltransferase A [Serratia
plymuthica AS9]
gi|386327367|ref|YP_006023537.1| ribosomal RNA small subunit methyltransferase A [Serratia sp. AS13]
gi|333472103|gb|AEF43813.1| Ribosomal RNA small subunit methyltransferase A [Serratia
plymuthica AS9]
gi|333489603|gb|AEF48765.1| Ribosomal RNA small subunit methyltransferase A [Serratia sp. AS12]
gi|333959700|gb|AEG26473.1| Ribosomal RNA small subunit methyltransferase A [Serratia sp. AS13]
Length = 272
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RL++M Q +CNV +P +F P P+VD VV P +P+ D+
Sbjct: 148 LVAGPNSKAYGRLTVMAQYYCNVIPVLEVPPTSFTPAPKVDSAVVRLVPHQVNPNPVGDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+++ R+ + F R+K V LF + L + P LR +SV ++
Sbjct: 208 --RMLSRITTQAFNQRRKTVRNSLGDLFTPEQ-------LTELGIDPTLRAENISVAQY 257
>gi|125624667|ref|YP_001033150.1| dimethyladenosine transferase [Lactococcus lactis subsp. cremoris
MG1363]
gi|389855037|ref|YP_006357281.1| dimethyladenosine transferase [Lactococcus lactis subsp. cremoris
NZ9000]
gi|124493475|emb|CAL98452.1| dimethyladenosine transferase [Lactococcus lactis subsp. cremoris
MG1363]
gi|300071459|gb|ADJ60859.1| dimethyladenosine transferase [Lactococcus lactis subsp. cremoris
NZ9000]
Length = 294
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 1/111 (0%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF-KLIERVVSCIFR 71
LSI Q + F +P FIP P VD ++ R P++++ + + + F
Sbjct: 178 LSIAVQYYMEASVAFIVPRTVFIPAPNVDSAILKMVRREEPLVEVEDEEWFFKTMHSSFV 237
Query: 72 YRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQICLA 122
+R+K + F K + + LL +A + P +R LS++EF ++ A
Sbjct: 238 HRRKTLMNNMQAAFGKESKPEIEKLLAQAEISPTIRGEALSIEEFAKLADA 288
>gi|345315252|ref|XP_001517920.2| PREDICTED: protein ApaG-like [Ornithorhynchus anatinus]
Length = 224
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 48/104 (46%), Gaps = 12/104 (11%)
Query: 16 MCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDLPFKLIERVVSCIFRY 72
M Q C V+H F + AF P P+VD +V P HP D KL+ERVV F
Sbjct: 1 MVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPHAVLPHPAKDQ--KLLERVVREAFNQ 58
Query: 73 RQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
R+K L K+ L + +E A V LRP QL + F
Sbjct: 59 RRK-------TLRNTLKQLLSNAEIEAAGVDGSLRPEQLDLAAF 95
>gi|422850714|ref|ZP_16897384.1| dimethyladenosine transferase [Streptococcus sanguinis SK150]
gi|325695462|gb|EGD37362.1| dimethyladenosine transferase [Streptococcus sanguinis SK150]
Length = 290
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 3/115 (2%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF-KLIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ R P +++ K +V F
Sbjct: 172 LSIAVQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRNQPPVEVQNEKFFFKVSKASFV 231
Query: 72 YRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEFGQICLAYR 124
+R+K ++ + F K + + + + LERA + P +R LS++EF ++ A +
Sbjct: 232 HRRKTLWNNLTSHFGKSEETKSKLTAALERADLSPSVRGEALSLEEFARLADALK 286
>gi|300728350|ref|ZP_07061714.1| dimethyladenosine transferase [Prevotella bryantii B14]
gi|299774386|gb|EFI71014.1| dimethyladenosine transferase [Prevotella bryantii B14]
Length = 270
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 14/109 (12%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDL--PFKLIERVVSCIF 70
LS++ Q W NV++ FT+ F P P+V V+ T + ++DL KL +R+V +F
Sbjct: 152 LSVLIQAWYNVEYLFTVDENVFNPPPKVKSAVIRMTR--NDVMDLGCDEKLFKRLVKTVF 209
Query: 71 RYRQKQVYKPASLLFPKRKRQ---LVVSLLERACVKPILRPYQLSVQEF 116
R+K + +FP K + L+ + RP QLS+Q+F
Sbjct: 210 NQRRKMLRVSIKQMFPGVKASEEFMTGELMTK-------RPEQLSIQQF 251
>gi|148543450|ref|YP_001270820.1| dimethyladenosine transferase [Lactobacillus reuteri DSM 20016]
gi|184152859|ref|YP_001841200.1| dimethyladenosine transferase [Lactobacillus reuteri JCM 1112]
gi|227363600|ref|ZP_03847717.1| dimethyladenosine transferase [Lactobacillus reuteri MM2-3]
gi|325681794|ref|ZP_08161313.1| dimethyladenosine transferase [Lactobacillus reuteri MM4-1A]
gi|166987695|sp|A5VI09.1|RSMA_LACRD RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226732591|sp|B2G5I8.1|RSMA_LACRJ RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|148530484|gb|ABQ82483.1| dimethyladenosine transferase [Lactobacillus reuteri DSM 20016]
gi|183224203|dbj|BAG24720.1| dimethyladenosine transferase [Lactobacillus reuteri JCM 1112]
gi|227071396|gb|EEI09702.1| dimethyladenosine transferase [Lactobacillus reuteri MM2-3]
gi|324978885|gb|EGC15833.1| dimethyladenosine transferase [Lactobacillus reuteri MM4-1A]
Length = 297
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 63/127 (49%), Gaps = 6/127 (4%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF- 59
+ A G +Q L++ + F + K F+P P VD +V TPR +P+ PF
Sbjct: 165 LTAKPGTKQYGALTLAIEYQMQAKIAFDVSRKVFVPAPNVDSAIVVLTPRTNPLPVQPFD 224
Query: 60 --KLIERVVSCIFRYRQKQVYKPASLLFPK--RKRQLVVSLLERACVKPILRPYQLSVQE 115
KL + C F +R+K ++ + K ++ + ++L + + P +RP +L++++
Sbjct: 225 KQKLFGFIRGC-FAHRRKSLWNNLQSVIGKDPAAKEKMTAVLNQLDISPQIRPEKLTLEQ 283
Query: 116 FGQICLA 122
F ++ A
Sbjct: 284 FIELANA 290
>gi|121997814|ref|YP_001002601.1| dimethyladenosine transferase [Halorhodospira halophila SL1]
gi|166221671|sp|A1WVT7.1|RSMA_HALHL RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|121589219|gb|ABM61799.1| dimethyladenosine transferase [Halorhodospira halophila SL1]
Length = 265
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 52/117 (44%), Gaps = 8/117 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPF 59
M+A G + R RLS+M Q C V+ F +P AF P P+V V P R P
Sbjct: 139 MVAPPGGKTRGRLSVMVQYRCRVERCFNVPAGAFFPAPKVMSSFVRLVPHRPLPARAQDE 198
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
++ VV+ F R+K + SL K + E A V P R LSV+ F
Sbjct: 199 AWLQEVVTAAFGGRRKTLRN--SL-----KGLVTAQAFEAAGVDPGARAETLSVEAF 248
>gi|433776031|ref|YP_007306498.1| dimethyladenosine transferase [Mesorhizobium australicum WSM2073]
gi|433668046|gb|AGB47122.1| dimethyladenosine transferase [Mesorhizobium australicum WSM2073]
Length = 279
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 54/122 (44%), Gaps = 8/122 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A + RL ++ F +P +AF P P+V VVH PR P + K
Sbjct: 165 IVAAPDSDAYGRLGVLAGWRTQARIAFDVPPQAFTPPPKVTSSVVHLEPRATP-LPADVK 223
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
+ RV F R+K + + L + +LLER + P R LSV+EF ++
Sbjct: 224 KLARVTEAAFGQRRKMLRQSVKSLGGE-------ALLERVGIDPTRRAETLSVEEFVRLT 276
Query: 121 LA 122
A
Sbjct: 277 NA 278
>gi|145640522|ref|ZP_01796106.1| dimethyladenosine transferase [Haemophilus influenzae R3021]
gi|145275108|gb|EDK14970.1| dimethyladenosine transferase [Haemophilus influenzae 22.4-21]
Length = 287
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 64/147 (43%), Gaps = 28/147 (19%)
Query: 12 RLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDLPFKLIERVVSC 68
RL+IM Q +C V +P AF P P+VD VV P HP+ DL + + RV S
Sbjct: 164 RLTIMAQYFCQVMPVLEVPPSAFKPAPKVDSAVVRLIPHKELPHPVKDLYW--LNRVCSQ 221
Query: 69 IFRYRQKQVYKPASLLF-PKRKRQLVVSLLERACVKPILRPYQLSVQEFGQICLAYRDMC 127
F R+K + S LF P+ L + L RA L++ ++ ++
Sbjct: 222 AFNQRRKTLRNALSTLFSPENLTALGIDLNARA--------ENLAIADYARLA------- 266
Query: 128 EEMPGLYEYTLEDTPGDIEPEAVAEQE 154
+ +++P DI + + + E
Sbjct: 267 -------NWLADNSPADINKDEILDSE 286
>gi|424909983|ref|ZP_18333360.1| dimethyladenosine transferase [Rhizobium leguminosarum bv. viciae
USDA 2370]
gi|392846014|gb|EJA98536.1| dimethyladenosine transferase [Rhizobium leguminosarum bv. viciae
USDA 2370]
Length = 276
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 56/118 (47%), Gaps = 12/118 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A EG RL ++ + F +P +AF P P+V VVH P+ P LP
Sbjct: 162 IVAEEGDNHYGRLGVLAGWRTVAEMAFDVPPQAFSPPPKVTSTVVHLLPKDKP---LPCD 218
Query: 61 L--IERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+ +E+V F R+K + + L + +LLE+A + P R LSV+EF
Sbjct: 219 VAKLEKVTEAAFGQRRKMLRQSVKSLGGE-------ALLEKAGIDPTRRAETLSVEEF 269
>gi|336248688|ref|YP_004592398.1| KsgA/Dim1 family 16S ribosomal RNA methyltransferase [Enterobacter
aerogenes KCTC 2190]
gi|334734744|gb|AEG97119.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Enterobacter aerogenes KCTC 2190]
Length = 273
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +C V +P AF P P+VD VV P +P+ D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCQVIPVLEVPPTAFTPPPKVDSAVVRLVPHRTMPYPVKDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+++ R+ + F R+K + LF V +L V P +R +SV+++
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VEVLAELGVDPAVRAENISVEQY 257
>gi|422759887|ref|ZP_16813649.1| dimethyladenosine transferase [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
gi|322412722|gb|EFY03630.1| dimethyladenosine transferase [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
Length = 290
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 58/117 (49%), Gaps = 3/117 (2%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ R P+I++ + RV F
Sbjct: 172 LSIAVQYYMAAKVAFIVPRTVFVPAPNVDSAILKMVRRDQPLIEVKNEDFFFRVSRLSFV 231
Query: 72 YRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEFGQICLAYRDM 126
+R+K ++ + F K + + + L A +KP +R LS+Q+FG++ A +++
Sbjct: 232 HRRKTLWNNLTSHFGKSEDIKAKLEKGLALANIKPSIRGEALSIQDFGKLADALKEV 288
>gi|317126783|ref|YP_004093065.1| dimethyladenosine transferase [Bacillus cellulosilyticus DSM 2522]
gi|315471731|gb|ADU28334.1| dimethyladenosine transferase [Bacillus cellulosilyticus DSM 2522]
Length = 292
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIFR 71
LSI Q + + + FT+P F+P+P VD ++ + R P I + + ++ F
Sbjct: 175 LSIAAQYYADAETVFTVPKTVFVPQPNVDSAILRLSIREKPPITVKDEAFFFEIIRASFA 234
Query: 72 YRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
R+K + + F +Q + +L+ + P R LS++EFG
Sbjct: 235 QRRKTILNNLAHHFSTLSKQTIEEILQSINIDPRRRGEALSMEEFG 280
>gi|408788840|ref|ZP_11200554.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Rhizobium lupini HPC(L)]
gi|408485278|gb|EKJ93618.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Rhizobium lupini HPC(L)]
Length = 276
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 56/118 (47%), Gaps = 12/118 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A EG RL ++ + F +P +AF P P+V VVH P+ P LP
Sbjct: 162 IVAEEGDNHYGRLGVLAGWRTVAEMAFDVPPQAFSPPPKVTSTVVHLLPKDKP---LPCD 218
Query: 61 L--IERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+ +E+V F R+K + + L + +LLE+A + P R LSV+EF
Sbjct: 219 VAKLEKVTEAAFGQRRKMLRQSVKSLGGE-------ALLEKAGIDPTRRAETLSVEEF 269
>gi|261344781|ref|ZP_05972425.1| hypothetical protein PROVRUST_06046 [Providencia rustigianii DSM
4541]
gi|282567226|gb|EFB72761.1| dimethyladenosine transferase [Providencia rustigianii DSM 4541]
Length = 269
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 59/131 (45%), Gaps = 12/131 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A G + RLS+M Q +CNV +P +F P P+VD VV P +P+ D+
Sbjct: 148 LVAGPGSKAFGRLSVMAQYYCNVVPVLEVPPTSFTPAPKVDSAVVRLIPHRENPYPVKDI 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
K++ R+ + F R+K + L L V L + P R +SV +
Sbjct: 208 --KMLSRITTQAFNQRRKTIRNSLGDL-------LSVEQLIELGIDPGTRAENISVAHYC 258
Query: 118 QICLAYRDMCE 128
++ ++ E
Sbjct: 259 KMANYLSNLSE 269
>gi|206578528|ref|YP_002240485.1| dimethyladenosine transferase [Klebsiella pneumoniae 342]
gi|288937185|ref|YP_003441244.1| dimethyladenosine transferase [Klebsiella variicola At-22]
gi|290512606|ref|ZP_06551972.1| dimethyladenosine transferase [Klebsiella sp. 1_1_55]
gi|226732590|sp|B5Y1Z4.1|RSMA_KLEP3 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|206567586|gb|ACI09362.1| dimethyladenosine transferase [Klebsiella pneumoniae 342]
gi|288891894|gb|ADC60212.1| dimethyladenosine transferase [Klebsiella variicola At-22]
gi|289774947|gb|EFD82949.1| dimethyladenosine transferase [Klebsiella sp. 1_1_55]
Length = 273
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 8/117 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPF 59
++A + RLS+M Q +C V +P AF P P+VD VV P R P
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCQVIPVLEVPPSAFTPPPKVDSAVVRLVPHRTMPYPVKEV 207
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+++ R+ + F R+K + LF V +L V P +R +SV+++
Sbjct: 208 RVLSRITTEAFNQRRKTIRNSLGNLFS-------VEVLTELGVDPAVRAENISVEQY 257
>gi|118600900|sp|Q2YVV2.2|RSMA_STAAB RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
Length = 297
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 11/124 (8%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLP---- 58
A G + LSI+ Q + T+P F+P P VD VV R P++ +
Sbjct: 166 AEVGSKAYGSLSIVVQYYTETSKVLTVPKSVFMPPPNVDSIVVKLMQRTEPLVTVDNEEA 225
Query: 59 -FKLIERVVSCIFRYRQKQVYKPASLLFP--KRKRQLVVSLLERACVKPILRPYQLSVQE 115
FKL F R+K + F K+ +++++ LE+A + P R LS+Q+
Sbjct: 226 FFKL----AKAAFAQRRKTINNNYQNYFKDGKQHKEVILQWLEQAGIDPRRRGETLSIQD 281
Query: 116 FGQI 119
F ++
Sbjct: 282 FAKL 285
>gi|386830136|ref|YP_006236790.1| ribosomal RNA adenine dimethylase [Staphylococcus aureus subsp.
aureus HO 5096 0412]
gi|417798432|ref|ZP_12445599.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21310]
gi|418580113|ref|ZP_13144202.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CIG1114]
gi|418655800|ref|ZP_13217637.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
IS-105]
gi|418878805|ref|ZP_13433038.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CIG1165]
gi|418880196|ref|ZP_13434417.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CIG1213]
gi|418883124|ref|ZP_13437325.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CIG1769]
gi|418885785|ref|ZP_13439936.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CIG1150]
gi|418888391|ref|ZP_13442529.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CIG1524]
gi|418893950|ref|ZP_13448052.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CIG1057]
gi|418902751|ref|ZP_13456793.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CIG1770]
gi|418907123|ref|ZP_13461143.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CIGC345D]
gi|418911159|ref|ZP_13465143.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CIG547]
gi|418914976|ref|ZP_13468945.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CIGC340D]
gi|418919306|ref|ZP_13473253.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CIGC348]
gi|418924716|ref|ZP_13478620.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CIG2018]
gi|418927806|ref|ZP_13481693.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CIG1612]
gi|418930518|ref|ZP_13484367.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CIG1750]
gi|418934839|ref|ZP_13488659.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CIGC128]
gi|418988934|ref|ZP_13536604.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CIG1835]
gi|418990382|ref|ZP_13538044.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CIG1096]
gi|418993204|ref|ZP_13540844.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CIG290]
gi|334275951|gb|EGL94224.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21310]
gi|375035561|gb|EHS28678.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
IS-105]
gi|377693083|gb|EHT17459.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CIG1114]
gi|377693311|gb|EHT17684.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CIG1165]
gi|377700065|gb|EHT24410.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CIG1057]
gi|377716776|gb|EHT40957.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CIG1769]
gi|377716828|gb|EHT41008.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CIG1835]
gi|377716855|gb|EHT41034.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CIG1750]
gi|377723811|gb|EHT47933.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CIG1096]
gi|377725350|gb|EHT49464.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CIG547]
gi|377727597|gb|EHT51702.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CIG1150]
gi|377733041|gb|EHT57088.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CIG1213]
gi|377739134|gb|EHT63141.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CIG1612]
gi|377743388|gb|EHT67370.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CIG1770]
gi|377747018|gb|EHT70986.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CIG2018]
gi|377747264|gb|EHT71229.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CIG290]
gi|377755235|gb|EHT79138.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CIG1524]
gi|377755328|gb|EHT79229.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CIGC340D]
gi|377761355|gb|EHT85229.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CIGC345D]
gi|377767518|gb|EHT91313.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CIGC348]
gi|377769836|gb|EHT93603.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CIGC128]
gi|385195528|emb|CCG15137.1| ribosomal RNA adenine dimethylase [Staphylococcus aureus subsp.
aureus HO 5096 0412]
Length = 296
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 11/124 (8%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLP---- 58
A G + LSI+ Q + T+P F+P P VD VV R P++ +
Sbjct: 165 AEVGSKAYGSLSIVVQYYTETSKVLTVPKSVFMPPPNVDSIVVKLMQRTEPLVTVDNEEA 224
Query: 59 -FKLIERVVSCIFRYRQKQVYKPASLLFP--KRKRQLVVSLLERACVKPILRPYQLSVQE 115
FKL F R+K + F K+ +++++ LE+A + P R LS+Q+
Sbjct: 225 FFKL----AKAAFAQRRKTINNNYQNYFKDGKQHKEVILQWLEQAGIDPRRRGETLSIQD 280
Query: 116 FGQI 119
F ++
Sbjct: 281 FAKL 284
>gi|323350567|ref|ZP_08086229.1| dimethyladenosine transferase [Streptococcus sanguinis VMC66]
gi|322123249|gb|EFX94934.1| dimethyladenosine transferase [Streptococcus sanguinis VMC66]
Length = 290
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 3/115 (2%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDL-PFKLIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ R P +++ K +V F
Sbjct: 172 LSIAVQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRDQPAVEVQDEKFFFKVSKASFV 231
Query: 72 YRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEFGQICLAYR 124
+R+K ++ + F K + + + + LERA + P +R LS++EF ++ A +
Sbjct: 232 HRRKTLWNNLTSCFGKSEETKGKLTAALERAELSPSVRGEALSLEEFARLADALK 286
>gi|258452826|ref|ZP_05700821.1| dimethyladenosine transferase [Staphylococcus aureus A5948]
gi|257859512|gb|EEV82365.1| dimethyladenosine transferase [Staphylococcus aureus A5948]
Length = 297
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 11/124 (8%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLP---- 58
A G + LSI+ Q + T+P F+P P VD VV R P++ +
Sbjct: 166 AEVGSKAYGSLSIVVQYYTETSKVLTVPKSVFMPPPNVDSIVVKLMQRTEPLVTVDNEEA 225
Query: 59 -FKLIERVVSCIFRYRQKQVYKPASLLFP--KRKRQLVVSLLERACVKPILRPYQLSVQE 115
FKL F R+K + F K+ +++++ LE+A + P R LS+Q+
Sbjct: 226 FFKL----AKAAFAQRRKTINNNYQNYFKDGKQHKEVILQWLEQAGIDPRRRGETLSIQD 281
Query: 116 FGQI 119
F ++
Sbjct: 282 FAKL 285
>gi|444353177|ref|YP_007389321.1| Dimethyladenosine transferase (EC 2.1.1.-) [Enterobacter aerogenes
EA1509E]
gi|443904007|emb|CCG31781.1| Dimethyladenosine transferase (EC 2.1.1.-) [Enterobacter aerogenes
EA1509E]
Length = 273
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +C V +P AF P P+VD VV P +P+ D+
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCQVIPVLEVPPTAFTPPPKVDSAVVRLVPHRTMPYPVKDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+++ R+ + F R+K + LF V +L V P +R +SV+++
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VEVLTELGVDPAVRAENISVEQY 257
>gi|386001511|ref|YP_005919810.1| putative ribosomal RNA small subunit methyltransferase A
[Methanosaeta harundinacea 6Ac]
gi|357209567|gb|AET64187.1| putative ribosomal RNA small subunit methyltransferase A
[Methanosaeta harundinacea 6Ac]
Length = 244
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 17/134 (12%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
M+A G +R RLS+ W + T+P AF P+PQV+ +V PR P + +
Sbjct: 125 MVAPPGTRERGRLSLNVAFWAEAEVLETVPRGAFSPRPQVESAIVRLRPRKTP-APVDWA 183
Query: 61 LIERVVSCIFRYRQKQVYKPASLLF--PKRKRQLVVSLLERACVKPILRPYQLSVQEFGQ 118
E + +F R+K++ + + + P ++ ++LER RP +LS++E
Sbjct: 184 GFEALTRGLFSMRRKKIKRALAAMKVPPDALSRIDPAVLER-------RPEELSLEEVV- 235
Query: 119 ICLAYRDMCEEMPG 132
DM E + G
Sbjct: 236 ------DMAEAISG 243
>gi|392972521|ref|ZP_10337910.1| ribosomal RNA small subunit methyltransferase A [Staphylococcus
equorum subsp. equorum Mu2]
gi|392509494|emb|CCI61217.1| ribosomal RNA small subunit methyltransferase A [Staphylococcus
equorum subsp. equorum Mu2]
Length = 296
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 58/133 (43%), Gaps = 11/133 (8%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLP---- 58
A G + LSI+ Q + T+P F+P P VD VV R P +D+
Sbjct: 165 AQVGTKAYGSLSIVTQYYTETSKVLTVPKTVFLPPPNVDSIVVKLMKRQTPEVDIDNEDK 224
Query: 59 -FKLIERVVSCIFRYRQKQVYKPASLLF--PKRKRQLVVSLLERACVKPILRPYQLSVQE 115
FK+ + F R+K + LF K ++++ LE + + P R LS++E
Sbjct: 225 FFKMTK----AAFSQRRKTISNNYQSLFVDGKANKEIIKKWLETSGIDPRRRGETLSIKE 280
Query: 116 FGQICLAYRDMCE 128
F ++ ++ E
Sbjct: 281 FAKLYNELKNFTE 293
>gi|418644622|ref|ZP_13206763.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
IS-55]
gi|418947276|ref|ZP_13499655.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
IS-157]
gi|375025141|gb|EHS18549.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
IS-55]
gi|375376552|gb|EHS80085.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
IS-157]
Length = 265
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 11/124 (8%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLP---- 58
A G + LSI+ Q + T+P F+P P VD VV R P++ +
Sbjct: 134 AEVGSKAYGSLSIVVQYYTETSKVLTVPKSVFMPPPNVDSIVVKLMQRTEPLVTVDNEEA 193
Query: 59 -FKLIERVVSCIFRYRQKQVYKPASLLFP--KRKRQLVVSLLERACVKPILRPYQLSVQE 115
FKL F R+K + F K+ +++++ LE+A + P R LS+Q+
Sbjct: 194 FFKL----AKAAFAQRRKTINNNYQNYFKDGKQHKEVILQWLEQAGIDPRRRGETLSIQD 249
Query: 116 FGQI 119
F ++
Sbjct: 250 FAKL 253
>gi|344939802|ref|ZP_08779090.1| Ribosomal RNA small subunit methyltransferase A [Methylobacter
tundripaludum SV96]
gi|344260994|gb|EGW21265.1| Ribosomal RNA small subunit methyltransferase A [Methylobacter
tundripaludum SV96]
Length = 282
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 8/119 (6%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDL-PFKL 61
A G ++ RLS+M Q +C + F +P ++F P PQV +V P P + +
Sbjct: 166 AAPGSKKYGRLSVMMQYYCATELLFDVPPESFDPAPQVMSAIVRLVPHQQPPVAVNDMSK 225
Query: 62 IERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
+ RVV+ F R+K + L + + +V+L + P LR +S+ EF ++
Sbjct: 226 LNRVVTQAFSQRRKTLRNSLKKLITEEE---IVAL----GIDPTLRAESISLAEFARLS 277
>gi|332522163|ref|ZP_08398415.1| dimethyladenosine transferase [Streptococcus porcinus str.
Jelinkova 176]
gi|332313427|gb|EGJ26412.1| dimethyladenosine transferase [Streptococcus porcinus str.
Jelinkova 176]
Length = 290
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 58/117 (49%), Gaps = 3/117 (2%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ RV P+I + + RV F
Sbjct: 172 LSIAVQYYMVAKVAFIVPRTVFVPAPNVDSAILKMERRVEPLIKVQDEDFFFRVAKVGFV 231
Query: 72 YRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEFGQICLAYRDM 126
+R+K ++ + F K + ++ + + LE A +K +R L++ EFG++ A + +
Sbjct: 232 HRRKTLWNNLTSHFGKSEETKKKLENALELAGIKANIRGEALTIAEFGKLADALKSV 288
>gi|386317774|ref|YP_006013938.1| dimethyladenosine transferase [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
gi|417752255|ref|ZP_12400477.1| dimethyladenosine transferase [Streptococcus dysgalactiae subsp.
equisimilis SK1249]
gi|323128061|gb|ADX25358.1| dimethyladenosine transferase [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
gi|333771977|gb|EGL48868.1| dimethyladenosine transferase [Streptococcus dysgalactiae subsp.
equisimilis SK1249]
Length = 290
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 7/119 (5%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ R P+I++ + RV F
Sbjct: 172 LSIAVQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRDQPLIEVKDEDFFFRVSRLSFV 231
Query: 72 YRQKQVYKPASLLFPKRKRQLVVSLLER----ACVKPILRPYQLSVQEFGQICLAYRDM 126
+R+K ++ + F K + + + LE+ A +KP +R LS+Q+FG++ A +++
Sbjct: 232 HRRKTLWNNLTSHFGKSED--IKTKLEKGLALADIKPSIRGEALSIQDFGKLADALKEV 288
>gi|15926170|ref|NP_373703.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
N315]
gi|21282177|ref|NP_645265.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
MW2]
gi|49485357|ref|YP_042578.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57634617|ref|NP_371017.2| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
Mu50]
gi|57651375|ref|YP_185424.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
COL]
gi|87160474|ref|YP_493179.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88194251|ref|YP_499043.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|148266951|ref|YP_001245894.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
JH9]
gi|150392997|ref|YP_001315672.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
JH1]
gi|156978821|ref|YP_001441080.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
Mu3]
gi|161508739|ref|YP_001574398.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|221142315|ref|ZP_03566808.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
str. JKD6009]
gi|253316230|ref|ZP_04839443.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
str. CF-Marseille]
gi|255005286|ref|ZP_05143887.2| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
Mu50-omega]
gi|258429609|ref|ZP_05688283.1| ksgA protein [Staphylococcus aureus A9299]
gi|258446120|ref|ZP_05694281.1| dimethyladenosine transferase [Staphylococcus aureus A6300]
gi|258448028|ref|ZP_05696158.1| ribosomal RNA adenine dimethylase [Staphylococcus aureus A6224]
gi|258453825|ref|ZP_05701798.1| dimethyladenosine transferase [Staphylococcus aureus A5937]
gi|262049978|ref|ZP_06022837.1| dimethyladenosine transferase [Staphylococcus aureus D30]
gi|262052522|ref|ZP_06024719.1| dimethyladenosine transferase [Staphylococcus aureus 930918-3]
gi|269202113|ref|YP_003281382.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
ED98]
gi|282895100|ref|ZP_06303320.1| dimethyladenosine transferase [Staphylococcus aureus A8117]
gi|282915811|ref|ZP_06323579.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
D139]
gi|282925567|ref|ZP_06333220.1| dimethyladenosine transferase [Staphylococcus aureus A9765]
gi|283768928|ref|ZP_06341837.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
H19]
gi|284023502|ref|ZP_06377900.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
132]
gi|294850352|ref|ZP_06791085.1| dimethyladenosine transferase [Staphylococcus aureus A9754]
gi|295407382|ref|ZP_06817179.1| dimethyladenosine transferase [Staphylococcus aureus A8819]
gi|296276552|ref|ZP_06859059.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
MR1]
gi|297246462|ref|ZP_06930302.1| dimethyladenosine transferase [Staphylococcus aureus A8796]
gi|379013774|ref|YP_005290010.1| KsgA/Dim1 family 16S ribosomal RNA methyltransferase
[Staphylococcus aureus subsp. aureus VC40]
gi|384863821|ref|YP_005749180.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
ECT-R 2]
gi|384869076|ref|YP_005751790.1| ribosomal RNA small subunit methyltransferase A [Staphylococcus
aureus subsp. aureus T0131]
gi|387142181|ref|YP_005730574.1| ribosomal RNA adenine dimethylase [Staphylococcus aureus subsp.
aureus TW20]
gi|387149653|ref|YP_005741217.1| Dimethyladenosine transferase [Staphylococcus aureus 04-02981]
gi|387601847|ref|YP_005733368.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
ST398]
gi|387779631|ref|YP_005754429.1| ribosomal RNA adenine dimethylase [Staphylococcus aureus subsp.
aureus LGA251]
gi|404477875|ref|YP_006709305.1| ribosomal RNA adenine dimethylase [Staphylococcus aureus 08BA02176]
gi|415689603|ref|ZP_11452862.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CGS01]
gi|415694291|ref|ZP_11455817.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CGS03]
gi|417648760|ref|ZP_12298579.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21189]
gi|417652223|ref|ZP_12301974.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21172]
gi|417654397|ref|ZP_12304118.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21193]
gi|417797739|ref|ZP_12444931.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21305]
gi|417800582|ref|ZP_12447697.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21318]
gi|417891593|ref|ZP_12535654.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21200]
gi|417892287|ref|ZP_12536338.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21201]
gi|417899052|ref|ZP_12542963.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21259]
gi|417900623|ref|ZP_12544504.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21266]
gi|418276832|ref|ZP_12891647.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21178]
gi|418284554|ref|ZP_12897272.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21209]
gi|418308297|ref|ZP_12919931.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21194]
gi|418310695|ref|ZP_12922230.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21331]
gi|418316055|ref|ZP_12927501.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21340]
gi|418318423|ref|ZP_12929826.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21232]
gi|418423662|ref|ZP_12996811.1| ribosomal RNA small subunit methyltransferase A [Staphylococcus
aureus subsp. aureus VRS1]
gi|418426606|ref|ZP_12999634.1| ribosomal RNA small subunit methyltransferase A [Staphylococcus
aureus subsp. aureus VRS2]
gi|418429532|ref|ZP_13002466.1| ribosomal RNA small subunit methyltransferase A [Staphylococcus
aureus subsp. aureus VRS3a]
gi|418432427|ref|ZP_13005229.1| ribosomal RNA small subunit methyltransferase A [Staphylococcus
aureus subsp. aureus VRS4]
gi|418436143|ref|ZP_13007961.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
VRS5]
gi|418439038|ref|ZP_13010762.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
VRS6]
gi|418442021|ref|ZP_13013640.1| ribosomal RNA small subunit methyltransferase A [Staphylococcus
aureus subsp. aureus VRS7]
gi|418445146|ref|ZP_13016640.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
VRS8]
gi|418448088|ref|ZP_13019496.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
VRS9]
gi|418450914|ref|ZP_13022257.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
VRS10]
gi|418453931|ref|ZP_13025205.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
VRS11a]
gi|418456835|ref|ZP_13028051.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
VRS11b]
gi|418559594|ref|ZP_13124132.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21252]
gi|418567838|ref|ZP_13132201.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21272]
gi|418571172|ref|ZP_13135415.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21283]
gi|418599407|ref|ZP_13162892.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21343]
gi|418638204|ref|ZP_13200506.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
IS-3]
gi|418642103|ref|ZP_13204303.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
IS-24]
gi|418648480|ref|ZP_13210523.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
IS-88]
gi|418651220|ref|ZP_13213229.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
IS-91]
gi|418653626|ref|ZP_13215562.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
IS-99]
gi|418662397|ref|ZP_13223947.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
IS-122]
gi|418873681|ref|ZP_13427968.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
IS-125]
gi|418953523|ref|ZP_13505514.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
IS-189]
gi|419774476|ref|ZP_14300443.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CO-23]
gi|419784398|ref|ZP_14310167.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
IS-M]
gi|424784344|ref|ZP_18211155.1| Dimethyladenosine transferase [Staphylococcus aureus CN79]
gi|440707784|ref|ZP_20888469.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21282]
gi|440736489|ref|ZP_20916088.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
DSM 20231]
gi|443636483|ref|ZP_21120590.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21236]
gi|443638617|ref|ZP_21122655.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21196]
gi|448741231|ref|ZP_21723199.1| dimethyladenosine transferase [Staphylococcus aureus KT/314250]
gi|448745273|ref|ZP_21727133.1| dimethyladenosine transferase [Staphylococcus aureus KT/Y21]
gi|47606760|sp|Q932G1.3|RSMA_STAAM RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|54037709|sp|P66663.1|RSMA_STAAW RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|54041550|sp|P66662.1|RSMA_STAAN RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|62900458|sp|Q5HII3.1|RSMA_STAAC RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|62900527|sp|Q6GBZ5.1|RSMA_STAAS RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|119365846|sp|Q2FJE9.1|RSMA_STAA3 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|119365847|sp|Q2G0T0.1|RSMA_STAA8 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|166221707|sp|A7WYP0.1|RSMA_STAA1 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|189028820|sp|A6TYW7.1|RSMA_STAA2 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|189028821|sp|A5IQ45.1|RSMA_STAA9 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|189028822|sp|A8Z0Y8.1|RSMA_STAAT RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|13700383|dbj|BAB41681.1| ksgA [Staphylococcus aureus subsp. aureus N315]
gi|21203613|dbj|BAB94313.1| ksgA [Staphylococcus aureus subsp. aureus MW2]
gi|46395517|dbj|BAB56655.2| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
Mu50]
gi|49243800|emb|CAG42225.1| ribosomal RNA adenine dimethylase [Staphylococcus aureus subsp.
aureus MSSA476]
gi|57285561|gb|AAW37655.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
COL]
gi|87126448|gb|ABD20962.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87201809|gb|ABD29619.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|147740020|gb|ABQ48318.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
JH9]
gi|149945449|gb|ABR51385.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
JH1]
gi|156720956|dbj|BAF77373.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
Mu3]
gi|160367548|gb|ABX28519.1| possible dimethyladenosine transferase [Staphylococcus aureus
subsp. aureus USA300_TCH1516]
gi|257849668|gb|EEV73635.1| ksgA protein [Staphylococcus aureus A9299]
gi|257855097|gb|EEV78039.1| dimethyladenosine transferase [Staphylococcus aureus A6300]
gi|257858718|gb|EEV81591.1| ribosomal RNA adenine dimethylase [Staphylococcus aureus A6224]
gi|257863996|gb|EEV86751.1| dimethyladenosine transferase [Staphylococcus aureus A5937]
gi|259159569|gb|EEW44616.1| dimethyladenosine transferase [Staphylococcus aureus 930918-3]
gi|259161913|gb|EEW46496.1| dimethyladenosine transferase [Staphylococcus aureus D30]
gi|262074403|gb|ACY10376.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
ED98]
gi|269940064|emb|CBI48440.1| ribosomal RNA adenine dimethylase [Staphylococcus aureus subsp.
aureus TW20]
gi|282320302|gb|EFB50644.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
D139]
gi|282592471|gb|EFB97483.1| dimethyladenosine transferase [Staphylococcus aureus A9765]
gi|282762518|gb|EFC02658.1| dimethyladenosine transferase [Staphylococcus aureus A8117]
gi|283461109|gb|EFC08195.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
H19]
gi|283469785|emb|CAQ48996.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
ST398]
gi|285816192|gb|ADC36679.1| Dimethyladenosine transferase [Staphylococcus aureus 04-02981]
gi|294822776|gb|EFG39212.1| dimethyladenosine transferase [Staphylococcus aureus A9754]
gi|294967739|gb|EFG43771.1| dimethyladenosine transferase [Staphylococcus aureus A8819]
gi|297176649|gb|EFH35911.1| dimethyladenosine transferase [Staphylococcus aureus A8796]
gi|312828988|emb|CBX33830.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
ECT-R 2]
gi|315128619|gb|EFT84622.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CGS03]
gi|315196174|gb|EFU26530.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CGS01]
gi|329313211|gb|AEB87624.1| Ribosomal RNA small subunit methyltransferase A [Staphylococcus
aureus subsp. aureus T0131]
gi|329725046|gb|EGG61541.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21172]
gi|329729797|gb|EGG66194.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21189]
gi|329731076|gb|EGG67448.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21193]
gi|334266210|gb|EGL84693.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21305]
gi|334277854|gb|EGL96071.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21318]
gi|341846790|gb|EGS87980.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21259]
gi|341847455|gb|EGS88635.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21266]
gi|341851820|gb|EGS92727.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21200]
gi|341857908|gb|EGS98715.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21201]
gi|344176733|emb|CCC87195.1| ribosomal RNA adenine dimethylase [Staphylococcus aureus subsp.
aureus LGA251]
gi|365173214|gb|EHM63798.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21209]
gi|365174010|gb|EHM64411.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21178]
gi|365236216|gb|EHM77116.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21331]
gi|365240081|gb|EHM80866.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21194]
gi|365242025|gb|EHM82753.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21340]
gi|365243040|gb|EHM83732.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21232]
gi|371974614|gb|EHO91934.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21252]
gi|371981191|gb|EHO98376.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21283]
gi|371981509|gb|EHO98683.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21272]
gi|374362471|gb|AEZ36576.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Staphylococcus aureus subsp. aureus VC40]
gi|374396936|gb|EHQ68155.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21343]
gi|375017634|gb|EHS11242.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
IS-24]
gi|375018474|gb|EHS12052.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
IS-99]
gi|375022907|gb|EHS16374.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
IS-3]
gi|375026105|gb|EHS19493.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
IS-88]
gi|375026230|gb|EHS19614.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
IS-91]
gi|375036448|gb|EHS29519.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
IS-122]
gi|375365972|gb|EHS69992.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
IS-125]
gi|375374908|gb|EHS78523.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
IS-189]
gi|383364144|gb|EID41464.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
IS-M]
gi|383971752|gb|EID87817.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CO-23]
gi|387721167|gb|EIK09048.1| ribosomal RNA small subunit methyltransferase A [Staphylococcus
aureus subsp. aureus VRS3a]
gi|387721206|gb|EIK09086.1| ribosomal RNA small subunit methyltransferase A [Staphylococcus
aureus subsp. aureus VRS2]
gi|387722598|gb|EIK10387.1| ribosomal RNA small subunit methyltransferase A [Staphylococcus
aureus subsp. aureus VRS1]
gi|387727651|gb|EIK15158.1| ribosomal RNA small subunit methyltransferase A [Staphylococcus
aureus subsp. aureus VRS4]
gi|387729590|gb|EIK17021.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
VRS5]
gi|387731686|gb|EIK18952.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
VRS6]
gi|387738600|gb|EIK25632.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
VRS8]
gi|387739753|gb|EIK26741.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
VRS9]
gi|387740012|gb|EIK26985.1| ribosomal RNA small subunit methyltransferase A [Staphylococcus
aureus subsp. aureus VRS7]
gi|387747053|gb|EIK33768.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
VRS10]
gi|387748390|gb|EIK35073.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
VRS11a]
gi|387749217|gb|EIK35857.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
VRS11b]
gi|404439364|gb|AFR72557.1| ribosomal RNA adenine dimethylase [Staphylococcus aureus 08BA02176]
gi|408422932|emb|CCJ10343.1| Ribosomal RNA small subunit methyltransferase A [Staphylococcus
aureus subsp. aureus ST228]
gi|408424920|emb|CCJ12307.1| Ribosomal RNA small subunit methyltransferase A [Staphylococcus
aureus subsp. aureus ST228]
gi|408426909|emb|CCJ14272.1| Ribosomal RNA small subunit methyltransferase A [Staphylococcus
aureus subsp. aureus ST228]
gi|408428897|emb|CCJ26062.1| Ribosomal RNA small subunit methyltransferase A [Staphylococcus
aureus subsp. aureus ST228]
gi|408430885|emb|CCJ18200.1| Ribosomal RNA small subunit methyltransferase A [Staphylococcus
aureus subsp. aureus ST228]
gi|408432879|emb|CCJ20164.1| Ribosomal RNA small subunit methyltransferase A [Staphylococcus
aureus subsp. aureus ST228]
gi|408434868|emb|CCJ22128.1| Ribosomal RNA small subunit methyltransferase A [Staphylococcus
aureus subsp. aureus ST228]
gi|408436853|emb|CCJ24096.1| Ribosomal RNA small subunit methyltransferase A [Staphylococcus
aureus subsp. aureus ST228]
gi|421957262|gb|EKU09585.1| Dimethyladenosine transferase [Staphylococcus aureus CN79]
gi|436429589|gb|ELP26955.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
DSM 20231]
gi|436505638|gb|ELP41526.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21282]
gi|443407659|gb|ELS66204.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21236]
gi|443408938|gb|ELS67446.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21196]
gi|445548023|gb|ELY16281.1| dimethyladenosine transferase [Staphylococcus aureus KT/314250]
gi|445561395|gb|ELY17599.1| dimethyladenosine transferase [Staphylococcus aureus KT/Y21]
Length = 297
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 11/124 (8%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLP---- 58
A G + LSI+ Q + T+P F+P P VD VV R P++ +
Sbjct: 166 AEVGSKAYGSLSIVVQYYTETSKVLTVPKSVFMPPPNVDSIVVKLMQRTEPLVTVDNEEA 225
Query: 59 -FKLIERVVSCIFRYRQKQVYKPASLLFP--KRKRQLVVSLLERACVKPILRPYQLSVQE 115
FKL F R+K + F K+ +++++ LE+A + P R LS+Q+
Sbjct: 226 FFKL----AKAAFAQRRKTINNNYQNYFKDGKQHKEVILQWLEQAGIDPRRRGETLSIQD 281
Query: 116 FGQI 119
F ++
Sbjct: 282 FAKL 285
>gi|71902882|ref|YP_279685.1| dimethyladenosine transferase [Streptococcus pyogenes MGAS6180]
gi|251783338|ref|YP_002997643.1| dimethyladenosine transferase [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|408402423|ref|YP_006860387.1| dimethyladenosine transferase [Streptococcus dysgalactiae subsp.
equisimilis RE378]
gi|118600903|sp|Q1JIN6.1|RSMA_STRPD RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|119365851|sp|Q48VC6.1|RSMA_STRPM RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|71801977|gb|AAX71330.1| dimethyladenosine transferase [Streptococcus pyogenes MGAS6180]
gi|94543239|gb|ABF33287.1| Dimethyladenosine transferase [Streptococcus pyogenes MGAS10270]
gi|242391970|dbj|BAH82429.1| dimethyladenosine transferase [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|407968652|dbj|BAM61890.1| dimethyladenosine transferase [Streptococcus dysgalactiae subsp.
equisimilis RE378]
Length = 298
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 7/119 (5%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ R P+I++ + RV F
Sbjct: 180 LSIAVQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRDQPLIEVKDEDFFFRVSRLSFV 239
Query: 72 YRQKQVYKPASLLFPKRKRQLVVSLLER----ACVKPILRPYQLSVQEFGQICLAYRDM 126
+R+K ++ + F K + + + LE+ A +KP +R LS+Q+FG++ A +++
Sbjct: 240 HRRKTLWNNLTSHFGKSED--IKTKLEKGLALADIKPSIRGEALSIQDFGKLADALKEV 296
>gi|19745394|ref|NP_606530.1| dimethyladenosine transferase [Streptococcus pyogenes MGAS8232]
gi|209558786|ref|YP_002285258.1| dimethyladenosine transferase [Streptococcus pyogenes NZ131]
gi|306828033|ref|ZP_07461298.1| dimethyladenosine transferase [Streptococcus pyogenes ATCC 10782]
gi|410495728|ref|YP_006905574.1| dimethyladenosine transferase [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
gi|27151569|sp|Q8P2N8.1|RSMA_STRP8 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|19747502|gb|AAL97029.1| putative dimethyladenosine transferase [Streptococcus pyogenes
MGAS8232]
gi|209539987|gb|ACI60563.1| Dimethyladenosine transferase [Streptococcus pyogenes NZ131]
gi|304429749|gb|EFM32793.1| dimethyladenosine transferase [Streptococcus pyogenes ATCC 10782]
gi|410440888|emb|CCI63516.1| dimethyladenosine transferase [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
Length = 290
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 7/119 (5%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ R P+I++ + RV F
Sbjct: 172 LSIAVQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRDQPLIEVKDEDFFFRVSRLSFV 231
Query: 72 YRQKQVYKPASLLFPKRKRQLVVSLLER----ACVKPILRPYQLSVQEFGQICLAYRDM 126
+R+K ++ + F K + + + LE+ A +KP +R LS+Q+FG++ A +++
Sbjct: 232 HRRKTLWNNLTSHFGKSED--IKTKLEKGLALADIKPSIRGEALSIQDFGKLADALKEV 288
>gi|418312125|ref|ZP_12923636.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21334]
gi|365238800|gb|EHM79629.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21334]
Length = 296
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 11/124 (8%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLP---- 58
A G + LSI+ Q + T+P F+P P VD VV R P++ +
Sbjct: 165 AEVGSKAYGSLSIVVQYYTETSKVLTVPKSVFMPPPNVDSIVVKLMQRTEPLVTVDNEEA 224
Query: 59 -FKLIERVVSCIFRYRQKQVYKPASLLFP--KRKRQLVVSLLERACVKPILRPYQLSVQE 115
FKL F R+K + F K+ +++++ LE+A + P R LS+Q+
Sbjct: 225 FFKL----AKAAFAQRRKTINNNYQNYFKDGKQHKEVILQWLEQAGIDPRRRGETLSIQD 280
Query: 116 FGQI 119
F ++
Sbjct: 281 FAKL 284
>gi|90580799|ref|ZP_01236602.1| dimethyladenosine transferase [Photobacterium angustum S14]
gi|90438067|gb|EAS63255.1| dimethyladenosine transferase [Vibrio angustum S14]
Length = 274
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 54/117 (46%), Gaps = 8/117 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPF 59
+ A G + RL++M Q +C V +P ++F+P P+VD VV TP P
Sbjct: 148 LAAGPGSKAYGRLTVMAQYYCRVMPVLEVPPESFVPAPKVDSAVVRLTPYETLPYPCTSL 207
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
K ++RV F R+K + LF + LE V P RP ++V++F
Sbjct: 208 KWLDRVCREGFNQRRKTIRNCYKALFTAEQ-------LEALGVNPGNRPENITVEQF 257
>gi|386362090|ref|YP_006071421.1| dimethyladenosine transferase [Streptococcus pyogenes Alab49]
gi|421891804|ref|ZP_16322558.1| Dimethyladenosine transferase [Streptococcus pyogenes NS88.2]
gi|350276499|gb|AEQ23867.1| dimethyladenosine transferase [Streptococcus pyogenes Alab49]
gi|379982452|emb|CCG26280.1| Dimethyladenosine transferase [Streptococcus pyogenes NS88.2]
Length = 290
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 7/119 (5%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ R P+I++ + RV F
Sbjct: 172 LSIAVQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRDQPLIEVEDEDFFFRVSRLSFV 231
Query: 72 YRQKQVYKPASLLFPKRKRQLVVSLLER----ACVKPILRPYQLSVQEFGQICLAYRDM 126
+R+K ++ + F K + + + LE+ A +KP +R LS+Q+FG++ A +++
Sbjct: 232 HRRKTLWNNLTSHFGKSED--IKTKLEKGLALADIKPSIRGEALSIQDFGKLADALKEV 288
>gi|330448803|ref|ZP_08312450.1| dimethyladenosine transferase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328492994|dbj|GAA06947.1| dimethyladenosine transferase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 274
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 8/117 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPF 59
+ A G + RL++M Q +C V +P ++F+P P+VD VV TP P
Sbjct: 148 LAAGPGSKAYGRLTVMAQYYCRVMPVLEVPPESFVPAPKVDSAVVRLTPYETLPYPCTSL 207
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
K ++RV F R+K + LF + LE + P RP ++V++F
Sbjct: 208 KWLDRVCREGFNQRRKTIRNCYKALFTAEQ-------LEALGINPSHRPENITVEQF 257
>gi|257794266|ref|ZP_05643245.1| dimethyladenosine transferase [Staphylococcus aureus A9781]
gi|258407216|ref|ZP_05680361.1| dimethyladenosine transferase [Staphylococcus aureus A9763]
gi|258420817|ref|ZP_05683753.1| dimethyladenosine transferase [Staphylococcus aureus A9719]
gi|258424472|ref|ZP_05687351.1| dimethyladenosine transferase [Staphylococcus aureus A9635]
gi|257788238|gb|EEV26578.1| dimethyladenosine transferase [Staphylococcus aureus A9781]
gi|257841174|gb|EEV65623.1| dimethyladenosine transferase [Staphylococcus aureus A9763]
gi|257843209|gb|EEV67622.1| dimethyladenosine transferase [Staphylococcus aureus A9719]
gi|257845341|gb|EEV69376.1| dimethyladenosine transferase [Staphylococcus aureus A9635]
Length = 299
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 11/124 (8%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLP---- 58
A G + LSI+ Q + T+P F+P P VD VV R P++ +
Sbjct: 168 AEVGSKAYGSLSIVVQYYTETSKVLTVPKSVFMPPPNVDSIVVKLMQRTEPLVTVDNEEA 227
Query: 59 -FKLIERVVSCIFRYRQKQVYKPASLLFP--KRKRQLVVSLLERACVKPILRPYQLSVQE 115
FKL F R+K + F K+ +++++ LE+A + P R LS+Q+
Sbjct: 228 FFKL----AKAAFAQRRKTINNNYQNYFKDGKQHKEVILQWLEQAGIDPRRRGETLSIQD 283
Query: 116 FGQI 119
F ++
Sbjct: 284 FAKL 287
>gi|403047718|ref|ZP_10903176.1| dimethyladenosine transferase [Staphylococcus sp. OJ82]
gi|402762459|gb|EJX16563.1| dimethyladenosine transferase [Staphylococcus sp. OJ82]
Length = 296
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 58/133 (43%), Gaps = 11/133 (8%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLP---- 58
A G + LSI+ Q + T+P F+P P VD VV R P +D+
Sbjct: 165 AQVGTKAYGSLSIVTQYYTETSKVLTVPKTVFLPPPNVDSIVVKLMKRQTPEVDIDNEDK 224
Query: 59 -FKLIERVVSCIFRYRQKQVYKPASLLF--PKRKRQLVVSLLERACVKPILRPYQLSVQE 115
FK+ + F R+K + LF K ++++ LE + + P R LS++E
Sbjct: 225 FFKMTK----AAFSQRRKTISNNYQSLFVDGKANKEIIKKWLETSGIDPRRRGETLSIKE 280
Query: 116 FGQICLAYRDMCE 128
F ++ ++ E
Sbjct: 281 FAKLYNELKNFTE 293
>gi|418658076|ref|ZP_13219821.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
IS-111]
gi|375039381|gb|EHS32311.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
IS-111]
Length = 297
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 11/124 (8%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLP---- 58
A G + LSI+ Q + T+P F+P P VD VV R P++ +
Sbjct: 166 AEVGSKAYGSLSIVVQYYTETSKVLTVPKSVFMPPPNVDSIVVKLMQRTEPLVTVDNEEA 225
Query: 59 -FKLIERVVSCIFRYRQKQVYKPASLLFP--KRKRQLVVSLLERACVKPILRPYQLSVQE 115
FKL F R+K + F K+ +++++ LE+A + P R LS+Q+
Sbjct: 226 FFKL----AKAAFAQRRKTINNNYQNYFKDGKQHKEVILQWLEQAGIDPRRRGETLSIQD 281
Query: 116 FGQI 119
F ++
Sbjct: 282 FAKL 285
>gi|229083358|ref|ZP_04215712.1| Dimethyladenosine transferase [Bacillus cereus Rock3-44]
gi|228699951|gb|EEL52582.1| Dimethyladenosine transferase [Bacillus cereus Rock3-44]
Length = 185
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 58/126 (46%), Gaps = 5/126 (3%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF- 59
+ A G + LSI Q + V+ T+P F+P+P VD V+ R PI+++
Sbjct: 55 LAAKPGTKDYGSLSIAIQYYTEVETVMTVPRTVFVPQPNVDSAVIRILKRPQPIVEVTDE 114
Query: 60 KLIERVVSCIFRYRQKQVYKPASLL---FPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
K VV F R+K + S FPK K +L+ +L + P R LS++EF
Sbjct: 115 KFFFEVVRASFAQRRKTLMNNLSNNLNGFPKDK-ELLERILTEVGIDPKRRGETLSIEEF 173
Query: 117 GQICLA 122
+ A
Sbjct: 174 AVLSNA 179
>gi|151220668|ref|YP_001331490.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
str. Newman]
gi|172048766|sp|A6QEE6.1|RSMA_STAAE RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|150373468|dbj|BAF66728.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
str. Newman]
Length = 297
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 11/124 (8%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLP---- 58
A G + LSI+ Q + T+P F+P P VD VV R P++ +
Sbjct: 166 AEVGSKAYGSLSIVVQYYTETSKVLTVPKSVFMPPPNVDSIVVKLMQRTEPLVTVDNEEA 225
Query: 59 -FKLIERVVSCIFRYRQKQVYKPASLLFP--KRKRQLVVSLLERACVKPILRPYQLSVQE 115
FKL F R+K + F K+ +++++ LE+A + P R LS+Q+
Sbjct: 226 FFKL----AKAAFAQRRKTINNNYQNYFKDGKQHKEVILQWLEQAGIDPRRRGETLSIQD 281
Query: 116 FGQI 119
F ++
Sbjct: 282 FAKL 285
>gi|94987854|ref|YP_595955.1| dimethyladenosine transferase [Streptococcus pyogenes MGAS9429]
gi|94991737|ref|YP_599836.1| dimethyladenosine transferase [Streptococcus pyogenes MGAS2096]
gi|118600901|sp|Q1JDL6.1|RSMA_STRPB RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|118600902|sp|Q1JNI8.1|RSMA_STRPC RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|94541362|gb|ABF31411.1| dimethyladenosine transferase [Streptococcus pyogenes MGAS9429]
gi|94545245|gb|ABF35292.1| Dimethyladenosine transferase [Streptococcus pyogenes MGAS2096]
Length = 298
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 58/117 (49%), Gaps = 3/117 (2%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ R P+I++ + RV F
Sbjct: 180 LSIAVQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRDQPLIEVKDEDFFFRVSRLSFV 239
Query: 72 YRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEFGQICLAYRDM 126
+R+K ++ + F K + + + L A +KP +R LS+Q+FG++ A +++
Sbjct: 240 HRRKTLWNNLTSHFGKSEDIKAKLEKGLALADIKPSIRGEALSIQDFGKLADALKEV 296
>gi|15674442|ref|NP_268616.1| dimethyladenosine transferase [Streptococcus pyogenes SF370]
gi|71910036|ref|YP_281586.1| dimethyladenosine transferase [Streptococcus pyogenes MGAS5005]
gi|410679912|ref|YP_006932314.1| dimethyladenosine transferase [Streptococcus pyogenes A20]
gi|417857546|ref|ZP_12502605.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Streptococcus pyogenes HKU QMH11M0907901]
gi|27151597|sp|Q9A1I0.1|RSMA_STRP1 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|13621537|gb|AAK33337.1| putative dimethyladenosine transferase [Streptococcus pyogenes M1
GAS]
gi|71852818|gb|AAZ50841.1| dimethyladenosine transferase [Streptococcus pyogenes MGAS5005]
gi|387934501|gb|EIK42614.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Streptococcus pyogenes HKU QMH11M0907901]
gi|395454705|dbj|BAM31044.1| dimethyladenosine transferase [Streptococcus pyogenes M1 476]
gi|409692501|gb|AFV37361.1| dimethyladenosine transferase [Streptococcus pyogenes A20]
Length = 290
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 58/117 (49%), Gaps = 3/117 (2%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ R P+I++ + RV F
Sbjct: 172 LSIAVQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRDQPLIEVKDEDFFFRVSRLSFV 231
Query: 72 YRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEFGQICLAYRDM 126
+R+K ++ + F K + + + L A +KP +R LS+Q+FG++ A +++
Sbjct: 232 HRRKTLWNNLTSHFGKSEDIKAKLEKGLALADIKPSIRGEALSIQDFGKLADALKEV 288
>gi|379020262|ref|YP_005296924.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
M013]
gi|384546772|ref|YP_005736025.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
ED133]
gi|417896631|ref|ZP_12540576.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21235]
gi|417903846|ref|ZP_12547680.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21269]
gi|418950574|ref|ZP_13502736.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
IS-160]
gi|298693823|gb|ADI97045.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
ED133]
gi|341840471|gb|EGS81975.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21235]
gi|341848894|gb|EGS90050.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21269]
gi|359829571|gb|AEV77549.1| Dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
M013]
gi|375376703|gb|EHS80225.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
IS-160]
Length = 297
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 11/124 (8%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLP---- 58
A G + LSI+ Q + T+P F+P P VD VV R P++ +
Sbjct: 166 AEVGSKAYGSLSIVVQYYTETSKVLTVPKSVFMPPPNVDSIVVKLMQRTEPLVTVDNEEA 225
Query: 59 -FKLIERVVSCIFRYRQKQVYKPASLLFP--KRKRQLVVSLLERACVKPILRPYQLSVQE 115
FKL F R+K + F K+ +++++ LE+A + P R LS+Q+
Sbjct: 226 FFKL----AKAAFAQRRKTINNNYQNYFKDGKQHKEVILQWLEQAGIDPRRRGETLSIQD 281
Query: 116 FGQI 119
F ++
Sbjct: 282 FAKL 285
>gi|418281814|ref|ZP_12894613.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21202]
gi|365172194|gb|EHM62922.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21202]
Length = 297
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 11/124 (8%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLP---- 58
A G + LSI+ Q + T+P F+P P VD VV R P++ +
Sbjct: 166 AEVGSKAYGSLSIVVQYYTETSKVLTVPKSVFMPPPNVDSIVVKLMQRTEPLVTVDNEEA 225
Query: 59 -FKLIERVVSCIFRYRQKQVYKPASLLFP--KRKRQLVVSLLERACVKPILRPYQLSVQE 115
FKL F R+K + F K+ +++++ LE+A + P R LS+Q+
Sbjct: 226 FFKL----AKAAFAQRRKTINNNYQNYFKDGKQHKEVILQWLEQAGIDPRRRGETLSIQD 281
Query: 116 FGQI 119
F ++
Sbjct: 282 FAKL 285
>gi|449060226|ref|ZP_21737890.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Klebsiella pneumoniae hvKP1]
gi|448874058|gb|EMB09121.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Klebsiella pneumoniae hvKP1]
Length = 273
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 53/119 (44%), Gaps = 12/119 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A + RLS+M Q +C V +P AF P P+VD VV P H + P K
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCQVIPVLEVPPSAFTPPPKVDSAVVRLVP--HSTMPYPVK 205
Query: 61 ---LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
++ R+ + F R+K + LF V +L + P +R +SV ++
Sbjct: 206 EIRVLSRITTEAFNQRRKTIRNSLGNLFS-------VEVLTELGIDPAMRAENISVAQY 257
>gi|385780758|ref|YP_005756929.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
11819-97]
gi|418320528|ref|ZP_12931885.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
VCU006]
gi|418573288|ref|ZP_13137487.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21333]
gi|418874508|ref|ZP_13428775.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CIGC93]
gi|364521747|gb|AEW64497.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
11819-97]
gi|365227019|gb|EHM68226.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
VCU006]
gi|371982611|gb|EHO99761.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21333]
gi|377772255|gb|EHT96006.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CIGC93]
Length = 296
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 11/124 (8%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLP---- 58
A G + LSI+ Q + T+P F+P P VD VV R P++ +
Sbjct: 165 AEVGSKAYGSLSIVVQYYTETSKVLTVPKSVFMPPPNVDSIVVKLMQRTEPLVTVDNEEA 224
Query: 59 -FKLIERVVSCIFRYRQKQVYKPASLLFP--KRKRQLVVSLLERACVKPILRPYQLSVQE 115
FKL F R+K + F K+ +++++ LE+A + P R LS+Q+
Sbjct: 225 FFKL----AKAAFAQRRKTINNNYQNYFKDGKQHKEVILQWLEQAGIDPRRRGETLSIQD 280
Query: 116 FGQI 119
F ++
Sbjct: 281 FAKL 284
>gi|417927623|ref|ZP_12571011.1| dimethyladenosine transferase [Streptococcus dysgalactiae subsp.
equisimilis SK1250]
gi|340765497|gb|EGR88023.1| dimethyladenosine transferase [Streptococcus dysgalactiae subsp.
equisimilis SK1250]
Length = 290
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 58/117 (49%), Gaps = 3/117 (2%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ R P+I++ + RV F
Sbjct: 172 LSIAVQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRDQPLIEVEDEDFFFRVSRLSFV 231
Query: 72 YRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEFGQICLAYRDM 126
+R+K ++ + F K + + + L A +KP +R LS+Q+FG++ A +++
Sbjct: 232 HRRKTLWNNLTSHFGKSEDIKAKLEKGLALADIKPSIRGEALSIQDFGKLADALKEV 288
>gi|117925614|ref|YP_866231.1| dimethyladenosine transferase [Magnetococcus marinus MC-1]
gi|171460784|sp|A0LA32.1|RSMA_MAGSM RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|117609370|gb|ABK44825.1| dimethyladenosine transferase [Magnetococcus marinus MC-1]
Length = 279
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 53/121 (43%), Gaps = 6/121 (4%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF- 59
+ A G + L++ C W + H F +P AF+P P+V VVH P + +
Sbjct: 155 LAAEPGSKAYGALTVQCALWAEIRHGFDVPPAAFLPAPKVTSAVVHVQMMRQPRVAVEDE 214
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
+ RVV F R+K + + P R LE+A + LR L++ +F Q+
Sbjct: 215 RHFVRVVKAAFAQRRKTLRNTLKTICPDPNR-----WLEQAGIDGALRAEVLTLAQFAQL 269
Query: 120 C 120
Sbjct: 270 A 270
>gi|260433483|ref|ZP_05787454.1| dimethyladenosine transferase [Silicibacter lacuscaerulensis
ITI-1157]
gi|260417311|gb|EEX10570.1| dimethyladenosine transferase [Silicibacter lacuscaerulensis
ITI-1157]
Length = 280
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 55/126 (43%), Gaps = 8/126 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A G + RL+I+ Q ++P AF P P+V VVH T P
Sbjct: 160 IVAQPGSKAYGRLAILAQWRAQAQIAMSLPPGAFTPPPKVSSAVVHLTALPEPRFPAEAG 219
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
+ RVV+ F R+K + L P + +L A +KP R Q+S++ F C
Sbjct: 220 TLSRVVAAAFNQRRKMLRAALKGLAPDIEDRLTA-----AGIKPTERAEQVSLEAF---C 271
Query: 121 LAYRDM 126
R++
Sbjct: 272 ALAREL 277
>gi|430820541|ref|ZP_19439169.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E0045]
gi|430826749|ref|ZP_19444922.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E0164]
gi|430829333|ref|ZP_19447427.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E0269]
gi|430925659|ref|ZP_19485414.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E1575]
gi|431204849|ref|ZP_19500726.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E1620]
gi|431765763|ref|ZP_19554265.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E4215]
gi|430439416|gb|ELA49768.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E0045]
gi|430444690|gb|ELA54511.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E0164]
gi|430480993|gb|ELA58160.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E0269]
gi|430553709|gb|ELA93393.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E1575]
gi|430571372|gb|ELB10288.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E1620]
gi|430627613|gb|ELB64100.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E4215]
Length = 294
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 3/120 (2%)
Query: 6 GMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF-KLIER 64
G + LSI Q + F +P F+P+P VD ++ T R P +++ K R
Sbjct: 169 GTKAYGSLSIAVQYYMEASLAFIVPKTVFVPQPNVDSAILKLTRRDIPAVEVTDEKAFFR 228
Query: 65 VVSCIFRYRQKQVYKPASLLFPK--RKRQLVVSLLERACVKPILRPYQLSVQEFGQICLA 122
+ F+ R+K ++ + K + + + LE A + P R LS+QEF + A
Sbjct: 229 LTKAAFQQRRKTLWNNLQHSYGKDDQTKAWLAKSLETAGIDPKRRGETLSLQEFAALSNA 288
>gi|224475635|ref|YP_002633241.1| dimethyladenosine transferase [Staphylococcus carnosus subsp.
carnosus TM300]
gi|254807884|sp|B9DLD0.1|RSMA_STACT RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|222420242|emb|CAL27056.1| ribosomal RNA adenine dimethylase [Staphylococcus carnosus subsp.
carnosus TM300]
Length = 296
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 11/121 (9%)
Query: 6 GMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPII-----DLPFK 60
G + LSI+ Q + T+P F+P P VD VV R PI+ D FK
Sbjct: 168 GTKAYGSLSIVAQYYTETSKVLTVPKTVFMPPPNVDSIVVKLMKRQAPIVAVDDEDQFFK 227
Query: 61 LIERVVSCIFRYRQKQVYKPASLLF--PKRKRQLVVSLLERACVKPILRPYQLSVQEFGQ 118
+ + F R+K + LF K+K+ ++ + LE + P R LS++EF
Sbjct: 228 MTK----AAFSQRRKTIANNYQSLFFDGKQKKYIIKTWLEDGGIDPRRRGETLSIKEFAN 283
Query: 119 I 119
+
Sbjct: 284 L 284
>gi|423613668|ref|ZP_17589528.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD107]
gi|401241357|gb|EJR47748.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD107]
Length = 291
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 5/126 (3%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G ++ LSI Q + V+ T+P F+P+P VD V+ R P++++ +
Sbjct: 161 LAAKPGTKEYGSLSIAIQYYTEVETVMTVPRTVFVPQPNVDSAVIRLLKRPKPVVEVTDE 220
Query: 61 -LIERVVSCIFRYRQKQVYKPASLL---FPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
VV F R+K + S FPK K +L+ +L + P R LS++EF
Sbjct: 221 AFFFEVVRASFAQRRKTLMNNLSNNLNGFPKDK-ELLDQILTEVEIDPKRRGETLSIEEF 279
Query: 117 GQICLA 122
++ A
Sbjct: 280 AKLSNA 285
>gi|254462138|ref|ZP_05075554.1| dimethyladenosine transferase [Rhodobacterales bacterium HTCC2083]
gi|206678727|gb|EDZ43214.1| dimethyladenosine transferase [Rhodobacteraceae bacterium HTCC2083]
Length = 280
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A G + RL+++ Q C+ +P +AF P P+V VVH T P FK
Sbjct: 160 IVAEPGSKAYGRLALLAQWRCDARIVINLPPEAFSPPPKVSSAVVHLTALSEPRFPADFK 219
Query: 61 LIERVVSCIFRYRQKQV 77
+ER+V+ F R+K +
Sbjct: 220 TLERLVATAFNQRRKML 236
>gi|379706040|ref|YP_005204499.1| dimethyladenosine transferase [Streptococcus infantarius subsp.
infantarius CJ18]
gi|374682739|gb|AEZ63028.1| dimethyladenosine transferase [Streptococcus infantarius subsp.
infantarius CJ18]
Length = 290
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 3/117 (2%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ T R P++ + + RV F
Sbjct: 172 LSIAVQYYMTAKVAFVVPRTVFVPAPNVDSAILKMTRREQPLVQVKDEDFFFRVSKIGFV 231
Query: 72 YRQKQVYKPASLLFPK--RKRQLVVSLLERACVKPILRPYQLSVQEFGQICLAYRDM 126
+R+K ++ + F K + + LE A +KP +R LS+ EF ++ A +++
Sbjct: 232 HRRKTLWNNLTSHFGKADETKAKLEQALEIAEIKPSIRGEALSIAEFAKLADALKEV 288
>gi|94993613|ref|YP_601711.1| dimethyladenosine transferase [Streptococcus pyogenes MGAS10750]
gi|118600904|sp|Q1J8J4.1|RSMA_STRPF RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|94547121|gb|ABF37167.1| Dimethyladenosine transferase [Streptococcus pyogenes MGAS10750]
Length = 298
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 58/117 (49%), Gaps = 3/117 (2%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ R P+I++ + RV F
Sbjct: 180 LSIAVQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRDQPLIEVEDEDFFFRVSRLSFV 239
Query: 72 YRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEFGQICLAYRDM 126
+R+K ++ + F K + + + L A +KP +R LS+Q+FG++ A +++
Sbjct: 240 HRRKTLWNNLTSHFGKSEDIKAKLEKGLALADIKPSIRGEALSIQDFGKLADALKEV 296
>gi|392963272|ref|ZP_10328698.1| Ribosomal RNA small subunit methyltransferase A [Pelosinus
fermentans DSM 17108]
gi|421056830|ref|ZP_15519747.1| dimethyladenosine transferase [Pelosinus fermentans B4]
gi|421059750|ref|ZP_15522312.1| Ribosomal RNA small subunit methyltransferase A [Pelosinus
fermentans B3]
gi|421065070|ref|ZP_15526873.1| Ribosomal RNA small subunit methyltransferase A [Pelosinus
fermentans A12]
gi|421069349|ref|ZP_15530521.1| Ribosomal RNA small subunit methyltransferase A [Pelosinus
fermentans A11]
gi|392438010|gb|EIW15872.1| dimethyladenosine transferase [Pelosinus fermentans B4]
gi|392450369|gb|EIW27422.1| Ribosomal RNA small subunit methyltransferase A [Pelosinus
fermentans A11]
gi|392451096|gb|EIW28090.1| Ribosomal RNA small subunit methyltransferase A [Pelosinus
fermentans DSM 17108]
gi|392458395|gb|EIW34932.1| Ribosomal RNA small subunit methyltransferase A [Pelosinus
fermentans B3]
gi|392459757|gb|EIW36136.1| Ribosomal RNA small subunit methyltransferase A [Pelosinus
fermentans A12]
Length = 280
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 2/120 (1%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
M+A G + LS+ Q + + F +P +FIP P VD V+ T R P +++ +
Sbjct: 158 MVAVPGTKDYGSLSVAVQYYTKPEIMFIVPPASFIPPPAVDSAVIRCTVREKPPVEVNER 217
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
+ RVV F R+K + +L + + +LE+A + R LS++EF I
Sbjct: 218 IFFRVVKAAFAQRRKTLSN--TLKTTGVPAETLKVILEKAGIDGGRRGETLSLEEFAAIA 275
>gi|336065069|ref|YP_004559928.1| dimethyladenosine transferase [Streptococcus pasteurianus ATCC
43144]
gi|334283269|dbj|BAK30842.1| dimethyladenosine transferase [Streptococcus pasteurianus ATCC
43144]
Length = 290
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 3/117 (2%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ T R P++ + + RV F
Sbjct: 172 LSIAVQYYMTAKVAFVVPRTVFVPAPNVDSAILKMTRREQPLVQVKDEDFFFRVSKISFV 231
Query: 72 YRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEFGQICLAYRDM 126
+R+K ++ + F K + + LE A +KP +R LS+ EF ++ A +++
Sbjct: 232 HRRKTLWNNLTSHFGKADEIKAKLEQALEIAEIKPSIRGEALSIAEFAKLADALKEV 288
>gi|431928742|ref|YP_007241776.1| dimethyladenosine transferase [Pseudomonas stutzeri RCH2]
gi|431827029|gb|AGA88146.1| dimethyladenosine transferase [Pseudomonas stutzeri RCH2]
Length = 264
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ AT G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 144 LAATPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPAPKVDSAIVRLVPHETLPHPARD- 202
Query: 58 PFKLIERVVSCIFRYRQKQV 77
+ +ERVV F R+K +
Sbjct: 203 -HRQLERVVREAFNQRRKTL 221
>gi|377556435|ref|ZP_09786142.1| Ribosomal RNA small subunit methyltransferase A [Lactobacillus
gastricus PS3]
gi|376168485|gb|EHS87254.1| Ribosomal RNA small subunit methyltransferase A [Lactobacillus
gastricus PS3]
Length = 297
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 6/127 (4%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF- 59
+ A G + L++ + F + ++F+P P VD +V TPR + I +LPF
Sbjct: 165 LTAKPGTKAYGSLTLAIEYQMQAKVAFNVSRRSFVPAPNVDSAIVVLTPRQNEIPELPFD 224
Query: 60 --KLIERVVSCIFRYRQKQVYKPASLLFP--KRKRQLVVSLLERACVKPILRPYQLSVQE 115
+L + C F +R+K ++ L + K LV + L + P RP QL++ +
Sbjct: 225 DKRLFGLIRGC-FAHRRKSLWNNLKSLMSNDRAKLDLVTNALAEVRIDPQTRPEQLTLND 283
Query: 116 FGQICLA 122
+ ++ A
Sbjct: 284 YIRLTNA 290
>gi|409385600|ref|ZP_11238177.1| Dimethyladenosine transferase [Lactococcus raffinolactis 4877]
gi|399207015|emb|CCK19092.1| Dimethyladenosine transferase [Lactococcus raffinolactis 4877]
Length = 290
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 3/113 (2%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ T R P++++ + +V F
Sbjct: 172 LSIAVQYYMTAQVAFIVPKTVFVPAPNVDSAILKMTRRDAPMVEVSDEDFFFKVAKLAFL 231
Query: 72 YRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEFGQICLA 122
+R+K ++ F K + R+ + LE A + P +R LS+ EF ++ A
Sbjct: 232 HRRKTLWNNLQSAFGKTEEVREQLTQALEVAGISPQIRGEALSIPEFSKLSEA 284
>gi|347726994|gb|AEP19855.1| dimethyladenosine transferase [Exiguobacterium sp. EPVM]
Length = 292
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 50/119 (42%), Gaps = 1/119 (0%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-L 61
A G + LSI Q + + F +P F+P P VD V+ R P +D+ +
Sbjct: 165 AKPGTKAYGSLSIAIQYYAEANVSFIVPKSVFMPAPNVDSAVITLKMRPKPAVDVKDEAF 224
Query: 62 IERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
+ F R+K + + K K+ + L A + P R LS++EF Q+
Sbjct: 225 FFEIARASFAQRRKTILNNLTNHLGKDKKMEIERFLGEAGIDPKRRGETLSLEEFAQLA 283
>gi|319760270|ref|YP_004124208.1| dimethyladenosine transferase [Candidatus Blochmannia vafer str.
BVAF]
gi|318038984|gb|ADV33534.1| dimethyladenosine transferase [Candidatus Blochmannia vafer str.
BVAF]
Length = 269
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 63/131 (48%), Gaps = 13/131 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVH---PIID 56
+IA ++ RLSIM Q V R + ++FIP P+V+ ++ FTP H PI+D
Sbjct: 148 IIAQPNSKEYGRLSIMTQYHYQVSSRLEVSKQSFIPIPKVESMIIQFTPYHAHFPYPIVD 207
Query: 57 LPFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+ +L+ + F R+K + S LF ++ +++ + LR L++Q+F
Sbjct: 208 I--RLLSFLTKIAFHQRRKIIKNSLSSLFNTKE-------MQKCGLDTTLRSENLTIQQF 258
Query: 117 GQICLAYRDMC 127
+ + C
Sbjct: 259 CMLAEILHNKC 269
>gi|430833896|ref|ZP_19451906.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E0679]
gi|430836845|ref|ZP_19454822.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E0680]
gi|430839877|ref|ZP_19457814.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E0688]
gi|430859339|ref|ZP_19476951.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E1552]
gi|430485796|gb|ELA62677.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E0679]
gi|430488168|gb|ELA64861.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E0680]
gi|430490326|gb|ELA66858.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E0688]
gi|430543700|gb|ELA83755.1| ribosomal RNA small subunit methyltransferase A [Enterococcus
faecium E1552]
Length = 294
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 3/120 (2%)
Query: 6 GMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF-KLIER 64
G + LSI Q + F +P F+P+P VD ++ T R P +++ K R
Sbjct: 169 GTKAYGSLSIAVQYYMEASLAFIVPKTVFVPQPNVDSAILKLTRRDIPAVEVTDEKAFFR 228
Query: 65 VVSCIFRYRQKQVYKPASLLFPK--RKRQLVVSLLERACVKPILRPYQLSVQEFGQICLA 122
+ F+ R+K ++ + K + + + LE A + P R LS+QEF + A
Sbjct: 229 LTKAAFQQRRKTLWNNLQHSYGKDDQTKAWLAKSLETAGIDPKRRGETLSLQEFAALSNA 288
>gi|374672734|dbj|BAL50625.1| dimethyladenosine transferase [Lactococcus lactis subsp. lactis
IO-1]
Length = 294
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 1/111 (0%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF-KLIERVVSCIFR 71
LSI Q + F +P FIP P VD ++ R P++++ + + + F
Sbjct: 178 LSIAVQYYMEASVAFIVPRTVFIPAPNVDSAILKMVRREEPLVEVEDEEWFFKTMHSSFV 237
Query: 72 YRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQICLA 122
+R+K + F K + + LL +A + P +R LS++EF ++ A
Sbjct: 238 HRRKTLMNNLQAAFGKESKPEIEKLLAQAEISPTIRGEALSIEEFAKLADA 288
>gi|256848354|ref|ZP_05553797.1| dimethyladenosine transferase [Lactobacillus coleohominis
101-4-CHN]
gi|256714952|gb|EEU29930.1| dimethyladenosine transferase [Lactobacillus coleohominis
101-4-CHN]
Length = 298
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 57/125 (45%), Gaps = 6/125 (4%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF- 59
+ A G +Q L++ + F + +F+P P VD +V TPR + + PF
Sbjct: 166 LTAKVGTKQYGALTLAIEYSMTAQLAFGVSRHSFVPAPNVDSAIVVLTPRTTALTEQPFD 225
Query: 60 --KLIERVVSCIFRYRQKQVYKPASLLF--PKRKRQLVVSLLERACVKPILRPYQLSVQE 115
KL + +C F +R+K ++ L K K+Q V L+ + RP LS+ +
Sbjct: 226 QAKLFSLIKTC-FAHRRKNLWNNLKPLMRKNKTKQQAVKDALDHLQIASTDRPETLSLLQ 284
Query: 116 FGQIC 120
F Q+
Sbjct: 285 FIQLA 289
>gi|410460308|ref|ZP_11313989.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Bacillus azotoformans LMG 9581]
gi|410460328|ref|ZP_11314008.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Bacillus azotoformans LMG 9581]
gi|409927267|gb|EKN64409.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Bacillus azotoformans LMG 9581]
gi|409927296|gb|EKN64436.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Bacillus azotoformans LMG 9581]
Length = 298
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 2/120 (1%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF-KL 61
A G + LSI Q + +P FIP+P +D V+ T R P + + +
Sbjct: 164 AAPGTKDYGSLSIAIQYYTEAKTVMIVPKTVFIPQPNIDSAVIRLTKRPEPAVKVTDEEF 223
Query: 62 IERVVSCIFRYRQKQVYKPASLLFPKR-KRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
VV F R+K ++ S F + +++ + L A + P R LS++EFG++
Sbjct: 224 FFTVVRASFAQRRKTIFNNLSSHFAQTIEKKNIEKALHAAGIDPKRRGETLSIEEFGRLS 283
>gi|225869784|ref|YP_002745731.1| dimethyladenosine transferase [Streptococcus equi subsp. equi 4047]
gi|254807885|sp|C0M8P2.1|RSMA_STRE4 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|225699188|emb|CAW92442.1| dimethyladenosine transferase [Streptococcus equi subsp. equi 4047]
Length = 290
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 3/115 (2%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ T R P+I++ + RV F
Sbjct: 172 LSIAVQYYMTAKIAFVVPRTVFVPAPNVDSAILKMTRRDQPLIEVQDEDFFFRVSRVGFV 231
Query: 72 YRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEFGQICLAYR 124
+R+K ++ F K + + + L A +KP +R LS+Q+FG++ A +
Sbjct: 232 HRRKTLWNNLVSHFGKAEDTKARLEQGLALAGIKPSIRGEALSIQDFGRLADALK 286
>gi|452851232|ref|YP_007492916.1| Ribosomal RNA small subunit methyltransferase A [Desulfovibrio
piezophilus]
gi|451894886|emb|CCH47765.1| Ribosomal RNA small subunit methyltransferase A [Desulfovibrio
piezophilus]
Length = 266
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 53/116 (45%), Gaps = 4/116 (3%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ AT G + L+ N+ N + F +P F P+P+VD VV FTP
Sbjct: 143 LTATPGNKAYGGLTAWVNNFANTRYLFKVPPTVFRPRPKVDSAVVSFTPLPRSQWPANPT 202
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+ ++ +F+ R+KQ+ S + K + V E VKP RP L+ Q+F
Sbjct: 203 NLSLLIKMLFQKRRKQL----STILKKHWSEEVDLWFENEKVKPEARPETLTPQQF 254
>gi|195977405|ref|YP_002122649.1| dimethyladenosine transferase [Streptococcus equi subsp.
zooepidemicus MGCS10565]
gi|225869264|ref|YP_002745212.1| dimethyladenosine transferase [Streptococcus equi subsp.
zooepidemicus]
gi|226732627|sp|B4U0U9.1|RSMA_STREM RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|259494258|sp|C0MF36.1|RSMA_STRS7 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|195974110|gb|ACG61636.1| dimethyladenosine transferase [Streptococcus equi subsp.
zooepidemicus MGCS10565]
gi|225702540|emb|CAX00496.1| dimethyladenosine transferase [Streptococcus equi subsp.
zooepidemicus]
Length = 290
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 3/115 (2%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ T R P+I++ + RV F
Sbjct: 172 LSIAVQYYMTAKIAFVVPRTVFVPAPNVDSAILKMTRRDQPLIEVQDEDFFFRVSRVGFV 231
Query: 72 YRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEFGQICLAYR 124
+R+K ++ F K + + + L A +KP +R LS+Q+FG++ A +
Sbjct: 232 HRRKTLWNNLVSHFGKAEDTKARLEQGLALAGIKPSIRGEALSIQDFGRLADALK 286
>gi|345888320|ref|ZP_08839416.1| dimethyladenosine transferase [Bilophila sp. 4_1_30]
gi|345040848|gb|EGW45069.1| dimethyladenosine transferase [Bilophila sp. 4_1_30]
Length = 264
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 57/123 (46%), Gaps = 10/123 (8%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP---RVHPIIDL 57
+ A G + LS+ Q++ V+ F + AF P P+VD VV F P HP
Sbjct: 141 LYAKPGTKDYGALSVWIQSYVRVEWGFVVGPGAFNPPPKVDSAVVTFIPLPRERHPADP- 199
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
K + ++ F+ R+KQ+ + + R V+ LER + P RP L+ ++F
Sbjct: 200 --KALSSILKLCFQLRRKQLQS----ILRRAGRDDTVAALERLGIAPEARPETLTPEQFQ 253
Query: 118 QIC 120
Q+
Sbjct: 254 QLA 256
>gi|357636017|ref|ZP_09133892.1| dimethyladenosine transferase [Streptococcus macacae NCTC 11558]
gi|357584471|gb|EHJ51674.1| dimethyladenosine transferase [Streptococcus macacae NCTC 11558]
Length = 290
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 55/120 (45%), Gaps = 11/120 (9%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPII-----DLPFKLIERVVS 67
LSI Q + F +P F+P P VD ++ T R ++ D F L
Sbjct: 172 LSIAVQYYMAAKLAFIVPSTVFVPAPNVDSAILKMTRREQSLVQVQDEDFFFHL----AK 227
Query: 68 CIFRYRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEFGQICLAYRD 125
F +R+K ++ + F K + + + LE+A +KP +R LS+ EF ++ A ++
Sbjct: 228 TAFVHRRKTLWNNLTSRFGKSEEVKAKLEQALEKADIKPSIRGEALSISEFAKLADALKE 287
>gi|334881255|emb|CCB82094.1| ribosomal RNA small subunit methyltransferase A [Lactobacillus
pentosus MP-10]
Length = 295
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 59/136 (43%), Gaps = 15/136 (11%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFT---PRVHPIIDL 57
+ A G + L+I Q + +P F+P P VD +V T PR H +
Sbjct: 164 LAAEPGTKAYGALTIAVQYRMAAEMAMVVPRTVFVPAPNVDSAIVKLTALPPRTH----V 219
Query: 58 PF--KLIERVVSCIFRYRQKQVYKPASLLFPKR--KRQLVVSLLERACVKPILRPYQLSV 113
PF +VV F +R+K ++ LF K+ + + LE A + P +R +L+V
Sbjct: 220 PFDEAAFFKVVKAGFAHRRKNLWNNLQSLFGKQPDTKTAIQQALEIAAIDPKIRAERLTV 279
Query: 114 QEFGQICLAYRDMCEE 129
EF + D C +
Sbjct: 280 DEF----ITLTDACHQ 291
>gi|406982983|gb|EKE04240.1| Ribosomal RNA small subunit methyltransferase A [uncultured
bacterium]
Length = 280
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 61/133 (45%), Gaps = 12/133 (9%)
Query: 1 MIATEGMEQR--CRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLP 58
++ATE + LSI+ W + + +P +F P P+VD ++ R PII +
Sbjct: 152 IVATEKSSSKEYGLLSILANYWADTELICKVPASSFYPAPKVDSALIKLKVRQEPIIQVS 211
Query: 59 F-KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
KL RV+ F R+K + +L V + L ++ ++P R +S++E
Sbjct: 212 NPKLFRRVIQGAFGQRRKNI--KNALTNAGFDSNTVTAALLKSNIEPGRRGETVSIEE-- 267
Query: 118 QICLAYRDMCEEM 130
YRD+ E +
Sbjct: 268 -----YRDLTEAI 275
>gi|414563213|ref|YP_006042174.1| dimethyladenosine transferase [Streptococcus equi subsp.
zooepidemicus ATCC 35246]
gi|338846278|gb|AEJ24490.1| dimethyladenosine transferase [Streptococcus equi subsp.
zooepidemicus ATCC 35246]
Length = 290
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 3/115 (2%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ T R P+I++ + RV F
Sbjct: 172 LSIAVQYYMTAKIAFVVPRTVFVPAPNVDSAILKMTRRDQPLIEVQDEDFFFRVSRVGFV 231
Query: 72 YRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEFGQICLAYR 124
+R+K ++ F K + + + L A +KP +R LS+Q+FG++ A +
Sbjct: 232 HRRKTLWNNLVSHFGKAEDTKARLEQGLALAGIKPSIRGEALSIQDFGRLADALK 286
>gi|408355407|ref|YP_006843938.1| 16S rRNA methyltransferase [Amphibacillus xylanus NBRC 15112]
gi|407726178|dbj|BAM46176.1| 16S rRNA methyltransferase [Amphibacillus xylanus NBRC 15112]
Length = 289
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 56/127 (44%), Gaps = 6/127 (4%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHP---IIDL 57
M A + LSI Q + H F +P AF+P+P V+ V+H T R P + D
Sbjct: 164 MAAEPNSKSYGSLSIAVQYYTEAIHTFNVPKTAFMPQPNVESAVLHLTFRKEPPVHVEDE 223
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFP-KRKRQLVVSLLERACVKPILRPYQLSVQEF 116
PF +V F R+K + F K +++V L++A + R LS+ EF
Sbjct: 224 PFFF--SLVRASFAQRRKTLRNNLVSFFKGKYDKEMVEEKLKQAEISGDRRAETLSIGEF 281
Query: 117 GQICLAY 123
+ +
Sbjct: 282 ANLANTF 288
>gi|395786024|ref|ZP_10465752.1| ribosomal RNA small subunit methyltransferase A [Bartonella tamiae
Th239]
gi|423717082|ref|ZP_17691272.1| ribosomal RNA small subunit methyltransferase A [Bartonella tamiae
Th307]
gi|395424482|gb|EJF90669.1| ribosomal RNA small subunit methyltransferase A [Bartonella tamiae
Th239]
gi|395427871|gb|EJF93954.1| ribosomal RNA small subunit methyltransferase A [Bartonella tamiae
Th307]
Length = 274
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 8/122 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+IA + RLS++ Q + F +P +AF P+P+V +VH PR +P I+ K
Sbjct: 160 IIAKPKTKHYGRLSVVSQWRTHAKIAFDVPAQAFTPQPKVTSSIVHLIPRENP-IECDKK 218
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
+E V F R+K + + L + +LL++ + R LSV+EF +
Sbjct: 219 QLEYVTKAAFGQRRKMLRQSLKSLGGE-------ALLQKVNIDTTRRAETLSVEEFVSLA 271
Query: 121 LA 122
A
Sbjct: 272 NA 273
>gi|383479414|ref|YP_005388308.1| dimethyladenosine transferase [Streptococcus pyogenes MGAS15252]
gi|383493339|ref|YP_005411015.1| dimethyladenosine transferase [Streptococcus pyogenes MGAS1882]
gi|378927404|gb|AFC65610.1| dimethyladenosine transferase [Streptococcus pyogenes MGAS15252]
gi|378929067|gb|AFC67484.1| dimethyladenosine transferase [Streptococcus pyogenes MGAS1882]
Length = 290
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 58/117 (49%), Gaps = 3/117 (2%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ R P+I++ + RV F
Sbjct: 172 LSIAVQYYMTAKVAFIVPRTVFVPAPNVDSAILKMMRRDQPLIEVEDEDFFFRVSRLSFV 231
Query: 72 YRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEFGQICLAYRDM 126
+R+K ++ + F K + + + L A +KP +R LS+Q+FG++ A +++
Sbjct: 232 HRRKTLWNNLTSHFGKSEDIKAKLEKGLALADIKPSIRGEALSIQDFGKLADALKEV 288
>gi|311028973|ref|ZP_07707063.1| dimethyladenosine transferase [Bacillus sp. m3-13]
Length = 296
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 54/127 (42%), Gaps = 11/127 (8%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPII----- 55
M A G ++ LSI Q + + +P F+P+P VD V+ R P +
Sbjct: 162 MAAKPGTKEYGSLSIAVQYFTQAETVMIVPKTVFVPQPNVDSAVIRLVVREEPPVRVKDE 221
Query: 56 DLPFKLIERVVSCIFRYRQKQVYKPASLLFP--KRKRQLVVSLLERACVKPILRPYQLSV 113
D F+ VV F R+K + P K K+Q + + L + P R LS+
Sbjct: 222 DFFFE----VVRASFGQRRKTILNNLQSNLPDGKAKKQGIEAALATTSIDPKRRGETLSI 277
Query: 114 QEFGQIC 120
+EFG +
Sbjct: 278 EEFGALS 284
>gi|407777044|ref|ZP_11124315.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Nitratireductor pacificus pht-3B]
gi|407301209|gb|EKF20330.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Nitratireductor pacificus pht-3B]
Length = 275
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 55/122 (45%), Gaps = 8/122 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A G + RL ++ + F +P +AF P P+V VV TPR P+ +
Sbjct: 161 IVAAPGDKAYGRLGVLAGWRSDARIAFDVPPQAFTPPPKVTSSVVQLTPRAEPLA-VDAT 219
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
++ RV F R+K + + L + +LL RA ++ R LSV EF +
Sbjct: 220 VLARVTEAAFGQRRKMLRQSLKPLGGE-------ALLARAGIEGTRRAETLSVAEFAALA 272
Query: 121 LA 122
A
Sbjct: 273 RA 274
>gi|421490665|ref|ZP_15938034.1| dimethyladenosine transferase [Streptococcus anginosus SK1138]
gi|400372562|gb|EJP25504.1| dimethyladenosine transferase [Streptococcus anginosus SK1138]
Length = 291
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 55/116 (47%), Gaps = 3/116 (2%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ T R P +++ + L +V F
Sbjct: 172 LSIAVQYYMTAKVAFIVPRTVFVPAPNVDSAILKMTRRDQPAVEVKDETLFFKVSKAGFT 231
Query: 72 YRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEFGQICLAYRD 125
+R+K ++ + F K + + S L+ A + P +R L +QEF ++ + D
Sbjct: 232 HRRKTLWNNLTSYFGKSNEVKTKLESALDNAELSPSVRGEALDLQEFARLADSLYD 287
>gi|149377956|ref|ZP_01895682.1| dimethyladenosine transferase [Marinobacter algicola DG893]
gi|149357730|gb|EDM46226.1| dimethyladenosine transferase [Marinobacter algicola DG893]
Length = 276
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 58/140 (41%), Gaps = 12/140 (8%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
M A G RL IM Q +C V F + AF P P+VD +V P HP +
Sbjct: 144 MAAVPGDNNYGRLGIMTQYFCRVQPLFEVGPGAFRPAPKVDSAIVRLVPHKTLPHPAKN- 202
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+KL++ VV F R+K + K + + + V L + LRP L + E+
Sbjct: 203 -YKLLQAVVRTAFSARRKTLRKALAGM-------VSVEQLNSIGINDGLRPENLGLAEYV 254
Query: 118 QICLAYRDMCEEMPGLYEYT 137
I D E G E +
Sbjct: 255 AIADLLADSRPENFGADEVS 274
>gi|223044398|ref|ZP_03614431.1| dimethyladenosine transferase [Staphylococcus capitis SK14]
gi|417906932|ref|ZP_12550710.1| dimethyladenosine transferase [Staphylococcus capitis VCU116]
gi|222442187|gb|EEE48299.1| dimethyladenosine transferase [Staphylococcus capitis SK14]
gi|341597133|gb|EGS39701.1| dimethyladenosine transferase [Staphylococcus capitis VCU116]
Length = 296
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 54/124 (43%), Gaps = 11/124 (8%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLP---- 58
AT G + LSI+ Q + T+P F+P P VD VV R P++ +
Sbjct: 165 ATVGTKAYGSLSIVAQYYTETSKVLTVPKSVFMPPPNVDSIVVKLMQREEPLVQVDNEEA 224
Query: 59 -FKLIERVVSCIFRYRQKQVYKPASLLFP--KRKRQLVVSLLERACVKPILRPYQLSVQE 115
FKL F R+K + F K+ + +++ LE A + P R L++Q+
Sbjct: 225 FFKL----AKAAFAQRRKTINNNYQNFFKDGKKHKASILNWLESAEIDPKRRGETLTIQD 280
Query: 116 FGQI 119
F +
Sbjct: 281 FANL 284
>gi|163791033|ref|ZP_02185454.1| dimethyladenosine transferase [Carnobacterium sp. AT7]
gi|159873678|gb|EDP67761.1| dimethyladenosine transferase [Carnobacterium sp. AT7]
Length = 297
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 3/132 (2%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF- 59
+ A G + LSI Q + + F +P FIP+P VD ++ T R P + +
Sbjct: 164 ITAAPGSKAYGSLSIAIQYYMEAEVAFIVPKTVFIPQPNVDSAIIKLTRRATPSVTVNNE 223
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPK--RKRQLVVSLLERACVKPILRPYQLSVQEFG 117
K +V F R+K ++ + + K R+ ++ LE A + P R LS+ EF
Sbjct: 224 KSFFALVRSAFVQRRKTLWNNLLIRYGKEDETREKLIQALEAANIDPKRRGETLSLAEFA 283
Query: 118 QICLAYRDMCEE 129
+ A ++ E
Sbjct: 284 LLSDAIDEIVLE 295
>gi|400289214|ref|ZP_10791246.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Psychrobacter sp. PAMC 21119]
Length = 287
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 11/125 (8%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVH-PIIDLPF 59
+ A G + RLS++ Q C+ D+ T+P AF P P+V V TP ++ PI+
Sbjct: 161 ITADVGSKTYGRLSVIMQYHCDTDYLLTVPRGAFNPPPKVTSAVFRLTPHINKPIVAEDE 220
Query: 60 KLIERVVSCIFRYRQKQ---VYKPASLLFPKRKRQLVVSLLERAC-VKPILRPYQLSVQE 115
VV F +R+K ++K ++LL + AC + P RP LSV++
Sbjct: 221 AYFAIVVRETFNHRRKTLRAIFKKSTLLPTLSEEDFA------ACAIDPQARPEVLSVKD 274
Query: 116 FGQIC 120
F +
Sbjct: 275 FVNLS 279
>gi|352090529|ref|ZP_08954578.1| dimethyladenosine transferase [Rhodanobacter sp. 2APBS1]
gi|389797149|ref|ZP_10200192.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Rhodanobacter sp. 116-2]
gi|351676902|gb|EHA60054.1| dimethyladenosine transferase [Rhodanobacter sp. 2APBS1]
gi|388447523|gb|EIM03523.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Rhodanobacter sp. 116-2]
Length = 262
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 60/125 (48%), Gaps = 10/125 (8%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPR-VHPIIDLPF 59
M A G + RLS+M Q C V+ F +P +AF P P+V+ VV P H + D P
Sbjct: 143 MAAEPGSKVYGRLSVMLQLACRVEPLFDVPPEAFRPPPKVESAVVRLLPLPAHELHDAPP 202
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLV-VSLLERACVKPILRPYQLSVQEFGQ 118
+ + VV F R+K + A+ L RQL+ + RA V P R L+ +F +
Sbjct: 203 EHLHAVVKAAFGQRRKTL---ANAL-----RQLLDADAIRRADVDPKARAETLAPADFVR 254
Query: 119 ICLAY 123
+ Y
Sbjct: 255 LAKIY 259
>gi|407707992|ref|YP_006831577.1| yitT family protein [Bacillus thuringiensis MC28]
gi|407385677|gb|AFU16178.1| dimethyladenosine transferase [Bacillus thuringiensis MC28]
Length = 292
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 5/126 (3%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G ++ LSI Q + V+ T+P F+P+P VD ++ R P++++ +
Sbjct: 161 LAAKPGTKEYGSLSIAIQYYTEVETVMTVPRTVFVPQPNVDSAIIRLLKRQKPVVEVTNE 220
Query: 61 -LIERVVSCIFRYRQKQVYKPASLL---FPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
VV F R+K + S FPK K +L+ +L + P R LS++EF
Sbjct: 221 TFFFEVVRASFAQRRKTLMNNLSNNLNGFPKDK-ELLDRILTEVGIDPKRRGETLSIEEF 279
Query: 117 GQICLA 122
+ A
Sbjct: 280 ATLSNA 285
>gi|418295926|ref|ZP_12907770.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Agrobacterium tumefaciens CCNWGS0286]
gi|355539358|gb|EHH08596.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Agrobacterium tumefaciens CCNWGS0286]
Length = 276
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 12/118 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A EG RL ++ + F +P +AF P P+V VVH P+ P LP
Sbjct: 162 IVAEEGDNHYGRLGVLAGWRTVAEMAFDVPPQAFSPPPKVTSTVVHLLPKDKP---LPCD 218
Query: 61 L--IERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+ +E+V F R+K + + L + +LLE+A + P R LSV EF
Sbjct: 219 VAKLEKVTEAAFGQRRKMLRQSVKSLGGE-------TLLEKAGIDPTRRAETLSVDEF 269
>gi|339637700|emb|CCC16666.1| ribosomal RNA small subunit methyltransferase A [Lactobacillus
pentosus IG1]
Length = 295
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 59/136 (43%), Gaps = 15/136 (11%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFT---PRVHPIIDL 57
+ A G + L+I Q + +P F+P P VD +V T PR H +
Sbjct: 164 LAAEPGTKAYGALTIAVQYRMAAEMAMVVPRTVFVPAPNVDSAIVKLTALPPRTH----V 219
Query: 58 PF--KLIERVVSCIFRYRQKQVYKPASLLFPKR--KRQLVVSLLERACVKPILRPYQLSV 113
PF +VV F +R+K ++ LF K+ + + LE A + P +R +L+V
Sbjct: 220 PFDEAAFFKVVKAGFAHRRKNLWNNLQSLFGKQPDTKTAIRQALEIAAIDPKIRAERLTV 279
Query: 114 QEFGQICLAYRDMCEE 129
EF + D C +
Sbjct: 280 DEF----ITLTDACHQ 291
>gi|377831023|ref|ZP_09814011.1| dimethyladenosine transferase [Lactobacillus mucosae LM1]
gi|377555120|gb|EHT16811.1| dimethyladenosine transferase [Lactobacillus mucosae LM1]
Length = 281
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 65/135 (48%), Gaps = 8/135 (5%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF- 59
+ A G ++ L++ + F + AF+P P VD +V TPR P+ P+
Sbjct: 149 LTAQPGTKEYGSLTLAIEYRMQARIAFGVSRHAFVPAPNVDSAIVVLTPRTQPLAAKPYD 208
Query: 60 --KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVV--SLLERACVKPILRPYQLSVQE 115
K V +C F +R+K ++ L K + VV ++L + P LRP +L++++
Sbjct: 209 EGKFFGFVKNC-FAHRRKSLWNNLKPLAGKDADKQVVIQNVLAELSISPQLRPEKLTLEQ 267
Query: 116 FGQICLAYRDMCEEM 130
F I LA + +++
Sbjct: 268 F--ITLANQLHAQKL 280
>gi|295099321|emb|CBK88410.1| dimethyladenosine transferase [Eubacterium cylindroides T2-87]
Length = 289
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 65/129 (50%), Gaps = 6/129 (4%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF- 59
+A++ ++ LS++ Q C++ + F P P VD V+ FT H +L
Sbjct: 161 FLASQNDKEYNALSVITQYRCDIKKVMDVSRHVFWPSPNVDSAVLQFT--FHHKYNLKDE 218
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
+L ++V F R+K +Y LF ++ L LLE+A +K +R Q ++++F ++
Sbjct: 219 ELFFKMVKACFVQRRKTIYNNFQTLFKDKEEAL--QLLEKAQLKSSIRAQQCTLEDFIRL 276
Query: 120 C-LAYRDMC 127
++Y +C
Sbjct: 277 YEVSYESLC 285
>gi|342903635|ref|ZP_08725444.1| Ribosomal RNA small subunit methyltransferase A [Haemophilus
haemolyticus M21621]
gi|341954986|gb|EGT81452.1| Ribosomal RNA small subunit methyltransferase A [Haemophilus
haemolyticus M21621]
Length = 288
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 63/149 (42%), Gaps = 28/149 (18%)
Query: 12 RLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDLPFKLIERVVSC 68
RL+IM Q +C V +P AF P P+VD VV P HP+ DL + + RV S
Sbjct: 164 RLTIMAQYFCQVMPVLEVPPSAFKPAPKVDSAVVRLIPHKELPHPVKDLYW--LNRVCSQ 221
Query: 69 IFRYRQKQVYKPASLLF-PKRKRQLVVSLLERACVKPILRPYQLSVQEFGQICLAYRDMC 127
F R+K + S LF P+ L + L RA L++ ++ ++
Sbjct: 222 AFNQRRKTLRNALSTLFSPENLTALGIDLNARA--------ENLAIADYARLA------- 266
Query: 128 EEMPGLYEYTLEDTPGDIEPEAVAEQEGE 156
+ ++ P DI E + E E
Sbjct: 267 -------NWLADNPPADINAEDIFELNDE 288
>gi|145637409|ref|ZP_01793068.1| dimethyladenosine transferase [Haemophilus influenzae PittHH]
gi|145269355|gb|EDK09299.1| dimethyladenosine transferase [Haemophilus influenzae PittHH]
Length = 287
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 28/147 (19%)
Query: 12 RLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDLPFKLIERVVSC 68
RL+IM Q +C V +P AF P P+VD VV P HP+ DL + + RV S
Sbjct: 164 RLTIMAQYFCQVMPVLEVPPSAFKPAPKVDSAVVRLIPHKELPHPVKDLYW--LNRVCSQ 221
Query: 69 IFRYRQKQVYKPASLLF-PKRKRQLVVSLLERACVKPILRPYQLSVQEFGQICLAYRDMC 127
F R+K + S LF P+ L + L RA L++ ++ ++
Sbjct: 222 AFNQRRKTLRNALSTLFSPENLTALGIDLNARA--------ENLAIADYARLA------- 266
Query: 128 EEMPGLYEYTLEDTPGDIEPEAVAEQE 154
+ +++P D+ + + + E
Sbjct: 267 -------NWLADNSPADVNKDEILDSE 286
>gi|402849512|ref|ZP_10897743.1| Dimethyladenosine transferase [Rhodovulum sp. PH10]
gi|402500197|gb|EJW11878.1| Dimethyladenosine transferase [Rhodovulum sp. PH10]
Length = 296
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 55/131 (41%), Gaps = 6/131 (4%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++AT G + RL+++ Q F I AF+P P+V VV PR P + P
Sbjct: 164 IVATPGNKVYGRLAVLSQWRSEPKILFDIAPSAFVPPPKVTSSVVRLVPRAKP-LPCPQP 222
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
+ERV + F R+K + + +L L E + P R ++SV F +
Sbjct: 223 ALERVTAAAFGQRRKMLRQSLKMLVADP-----TPLFEATGIAPTARAEEISVAGFVALA 277
Query: 121 LAYRDMCEEMP 131
A D P
Sbjct: 278 NALADAVRGKP 288
>gi|397779474|ref|YP_006543947.1| dimethyladenosine transferase [Methanoculleus bourgensis MS2]
gi|396937976|emb|CCJ35231.1| dimethyladenosine transferase [Methanoculleus bourgensis MS2]
Length = 266
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 56/130 (43%), Gaps = 19/130 (14%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
MIA G RLS+M Q + +V + +F PKPQV VV TP + P+
Sbjct: 131 MIARPGKPGVGRLSVMVQTYASVKPLLELSPNSFRPKPQVRSWVVRITPH-----EPPYP 185
Query: 61 LIER-----VVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVK-----PILRPYQ 110
L +R VV +F YR+K V K K +ERA LRP
Sbjct: 186 LADRGVYADVVRVLFSYRRKTVRK----ALRSGKDAFAPEAIERAIAGLPDDLLQLRPED 241
Query: 111 LSVQEFGQIC 120
LS++EF I
Sbjct: 242 LSLEEFALIA 251
>gi|317153209|ref|YP_004121257.1| dimethyladenosine transferase [Desulfovibrio aespoeensis Aspo-2]
gi|316943460|gb|ADU62511.1| dimethyladenosine transferase [Desulfovibrio aespoeensis Aspo-2]
Length = 261
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 63/118 (53%), Gaps = 8/118 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF- 59
+ A G + L+ +N+ + + F +P F P+P+VD VV F PR P+ + P
Sbjct: 143 LTAEPGCKAYGGLTAWVRNFADTRYLFKVPPTVFRPQPKVDSAVVAFVPR--PVGEWPRS 200
Query: 60 -KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+ ++R++ +F+ R+KQ+ +++L P ++ + + + P+ RP LS Q+F
Sbjct: 201 PQALDRLIKMLFQKRRKQL---SNILKPLWSQE-IENWFASQGISPMARPETLSPQQF 254
>gi|366054192|ref|ZP_09451914.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Lactobacillus suebicus KCTC 3549]
Length = 298
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 59/128 (46%), Gaps = 10/128 (7%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF- 59
+ A G + LS+ Q + + F +P F+P P VD +V PR + P
Sbjct: 165 LAANPGTKAYGTLSLTVQYKMDAELAFEVPRTVFVPSPNVDSAIVSLEPRKKELAVKPDD 224
Query: 60 -KLIERVVSCIFRYRQKQVYKPASLLFPK----RKRQLVVSLLERACVKPILRPYQLSVQ 114
KL+ R++ F +R+K + + K +K+ L LLE + P +RP LS+
Sbjct: 225 EKLLFRLIKGCFSHRRKTLSNNLQSVLGKGAEIKKQSL--QLLEDLNISPTIRPESLSLD 282
Query: 115 EFGQICLA 122
+F I LA
Sbjct: 283 QF--ILLA 288
>gi|422879744|ref|ZP_16926209.1| dimethyladenosine transferase [Streptococcus sanguinis SK1059]
gi|422929589|ref|ZP_16962530.1| dimethyladenosine transferase [Streptococcus sanguinis ATCC 29667]
gi|422932558|ref|ZP_16965489.1| dimethyladenosine transferase [Streptococcus sanguinis SK340]
gi|332365155|gb|EGJ42918.1| dimethyladenosine transferase [Streptococcus sanguinis SK1059]
gi|339614829|gb|EGQ19519.1| dimethyladenosine transferase [Streptococcus sanguinis ATCC 29667]
gi|339618309|gb|EGQ22907.1| dimethyladenosine transferase [Streptococcus sanguinis SK340]
Length = 290
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 56/115 (48%), Gaps = 3/115 (2%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDL-PFKLIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ R P +++ K ++ F
Sbjct: 172 LSIAVQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRDQPAVEVQDEKFFFKISKASFV 231
Query: 72 YRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEFGQICLAYR 124
+R+K ++ + F K + + + + LERA + P +R LS++EF ++ A +
Sbjct: 232 HRRKTLWNNLTSCFGKSEETKGKLTAALERAELSPSVRGEALSLEEFARLADALK 286
>gi|83945291|ref|ZP_00957640.1| dimethyladenosine transferase [Oceanicaulis sp. HTCC2633]
gi|83851461|gb|EAP89317.1| dimethyladenosine transferase [Oceanicaulis sp. HTCC2633]
Length = 284
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 58/128 (45%), Gaps = 9/128 (7%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHF--TPRVHPIIDLP 58
++A G +Q RL+I+ + FT+P +AF P P+VD VV P DL
Sbjct: 158 VVARAGDKQYGRLAILAAAVAKSRYAFTVPARAFTPPPKVDSAVVVIEPLPEAQRFTDL- 216
Query: 59 FKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVV--SLLERACVKPILRPYQLSVQEF 116
K + V F R+K + K L P + V +LLE A + P R ++ + F
Sbjct: 217 -KALSIVTESAFGQRRKTLRKS---LGPAASQTRVSPEALLEEAGIDPGARAETIAPEGF 272
Query: 117 GQICLAYR 124
+ A+R
Sbjct: 273 FTLARAWR 280
>gi|152978411|ref|YP_001344040.1| dimethyladenosine transferase [Actinobacillus succinogenes 130Z]
gi|150840134|gb|ABR74105.1| dimethyladenosine transferase [Actinobacillus succinogenes 130Z]
Length = 288
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 12 RLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDLPFKLIERVVSC 68
RL+IM Q +C V +P AF P P+VD VV P HP DL + + RV S
Sbjct: 165 RLTIMTQYFCQVMPVLEVPPTAFKPAPKVDSAVVRLIPHKTLPHPAKDLYW--LNRVTSQ 222
Query: 69 IFRYRQKQVYKPASLLF-PKRKRQLVVSLLERA 100
F R+K + S LF P+ L V L RA
Sbjct: 223 AFNQRRKTLRNALSTLFSPENLTALGVDLTARA 255
>gi|422861576|ref|ZP_16908216.1| dimethyladenosine transferase [Streptococcus sanguinis SK330]
gi|327468444|gb|EGF13929.1| dimethyladenosine transferase [Streptococcus sanguinis SK330]
Length = 290
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 3/115 (2%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDL-PFKLIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ R P + + K +V F
Sbjct: 172 LSIAVQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRDQPAVAVQDEKFFFKVSKASFV 231
Query: 72 YRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEFGQICLAYR 124
+R+K ++ + F K + + + + LERA + P +R LS++EF ++ A +
Sbjct: 232 HRRKTLWNNLTSCFGKSEETKDKLTAALERAELSPSVRGEALSLEEFARLADALK 286
>gi|315635079|ref|ZP_07890359.1| dimethyladenosine transferase [Aggregatibacter segnis ATCC 33393]
gi|315476200|gb|EFU66952.1| dimethyladenosine transferase [Aggregatibacter segnis ATCC 33393]
Length = 287
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 49/102 (48%), Gaps = 6/102 (5%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDLPF 59
A+ + RL+IM Q +C V +P AF P P+VD VV P HP+ DL +
Sbjct: 155 ASPNSKAYGRLTIMAQYFCQVMPVLEVPPSAFKPAPKVDSAVVRLIPHTTLPHPVKDLYW 214
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLF-PKRKRQLVVSLLERA 100
+ RV S F R+K + S LF P+ L + L RA
Sbjct: 215 --LNRVCSQAFNQRRKTLRNALSGLFLPENLTALNIDLNARA 254
>gi|227544731|ref|ZP_03974780.1| dimethyladenosine transferase [Lactobacillus reuteri CF48-3A]
gi|338203745|ref|YP_004649890.1| dimethyladenosine transferase [Lactobacillus reuteri SD2112]
gi|227185271|gb|EEI65342.1| dimethyladenosine transferase [Lactobacillus reuteri CF48-3A]
gi|336448985|gb|AEI57600.1| dimethyladenosine transferase [Lactobacillus reuteri SD2112]
Length = 297
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 63/127 (49%), Gaps = 6/127 (4%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF- 59
+ A G +Q L++ + F + K F+P P VD +V TPR +P+ PF
Sbjct: 165 LTAKPGTKQYGELTLAIEYQMQAKIAFDVSRKVFVPSPNVDSAIVVLTPRTNPLPVQPFD 224
Query: 60 --KLIERVVSCIFRYRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQE 115
KL + C F +R+K ++ + K ++ + ++L + + P +RP +L++++
Sbjct: 225 KQKLFGFIRGC-FAHRRKSLWNNLQSVIGKDPAVKEKMTAVLAQLDISPQIRPEKLTLEQ 283
Query: 116 FGQICLA 122
F ++ A
Sbjct: 284 FIELANA 290
>gi|118475813|ref|YP_892964.1| dimethyladenosine transferase [Bacillus thuringiensis str. Al
Hakam]
gi|196047365|ref|ZP_03114578.1| dimethyladenosine transferase [Bacillus cereus 03BB108]
gi|225862093|ref|YP_002747471.1| dimethyladenosine transferase [Bacillus cereus 03BB102]
gi|376264068|ref|YP_005116780.1| Dimethyladenosine transferase [Bacillus cereus F837/76]
gi|166221644|sp|A0R8B4.1|RSMA_BACAH RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|254807859|sp|C1ESX0.1|RSMA_BACC3 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|118415038|gb|ABK83457.1| dimethyladenosine transferase [Bacillus thuringiensis str. Al
Hakam]
gi|196021767|gb|EDX60461.1| dimethyladenosine transferase [Bacillus cereus 03BB108]
gi|225788520|gb|ACO28737.1| dimethyladenosine transferase [Bacillus cereus 03BB102]
gi|364509868|gb|AEW53267.1| Dimethyladenosine transferase [Bacillus cereus F837/76]
Length = 292
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 5/126 (3%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G ++ LSI Q + V+ T+P F+P+P VD ++ R P++++ +
Sbjct: 161 LAAKPGTKEYGSLSIAIQYYTEVETVMTVPRTVFVPQPNVDSAIIRLLKRPKPVVEVTDE 220
Query: 61 L-IERVVSCIFRYRQKQVYKPASLL---FPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+ VV F R+K + S FPK K +L+ +L + P R LS++EF
Sbjct: 221 IFFFEVVRASFAQRRKTLMNNLSNNLNGFPKDK-ELLDRILTEVGIDPKRRGETLSIEEF 279
Query: 117 GQICLA 122
+ A
Sbjct: 280 ATLSNA 285
>gi|329850882|ref|ZP_08265727.1| dimethyladenosine transferase [Asticcacaulis biprosthecum C19]
gi|328841197|gb|EGF90768.1| dimethyladenosine transferase [Asticcacaulis biprosthecum C19]
Length = 275
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 54/122 (44%), Gaps = 7/122 (5%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A G + RLS++ Q C+ +P +AF P P+VD VV P+ K
Sbjct: 159 VVAPVGDDDYGRLSVISQILCDASKIMDLPARAFTPPPRVDSAVVRLIPKADRPAPAVIK 218
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
+E+V + F R+K + L + LL++A + LR Q+ F ++
Sbjct: 219 NLEKVTAAAFGQRRKMLRSSLKSLGGE-------VLLDKAAIDATLRAEQVGPDGFLRLA 271
Query: 121 LA 122
A
Sbjct: 272 TA 273
>gi|376295304|ref|YP_005166534.1| dimethyladenosine transferase [Desulfovibrio desulfuricans ND132]
gi|323457865|gb|EGB13730.1| dimethyladenosine transferase [Desulfovibrio desulfuricans ND132]
Length = 260
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 10/126 (7%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP---RVHPIIDL 57
+ A G + L+ +N+ + + F +P F P+P+VD VV F P P +
Sbjct: 142 LTAEPGSKAYGGLTAWVRNFSDTRYLFKVPPTVFRPRPKVDSAVVRFDPLPAGARP--ED 199
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
P +L E ++ +F+ R+KQ+ S + KR V V P LRP L+ +F
Sbjct: 200 PDRLAE-LIKLLFQQRRKQI----STILKKRMTPAVEQWFREEGVSPSLRPENLTPTQFR 254
Query: 118 QICLAY 123
+ L Y
Sbjct: 255 ALSLIY 260
>gi|171779142|ref|ZP_02920113.1| hypothetical protein STRINF_00988 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171282198|gb|EDT47625.1| dimethyladenosine transferase [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 290
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 3/117 (2%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ T R P++ + + RV F
Sbjct: 172 LSIAVQYYMTAKVAFVVPRTVFVPAPNVDSAILKMTRREQPLVQVKDEDFFFRVSKIGFV 231
Query: 72 YRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEFGQICLAYRDM 126
+R+K ++ + F K + + LE A +KP +R LS+ EF ++ A +++
Sbjct: 232 HRRKTLWNNLTSHFGKADEIKAKLEQALEIAEIKPSIRGEALSIAEFAKLADALKEV 288
>gi|379011470|ref|YP_005269282.1| ribsosomal RNA small subunit methyltransferease RsmA
[Acetobacterium woodii DSM 1030]
gi|375302259|gb|AFA48393.1| ribsosomal RNA small subunit methyltransferease RsmA
[Acetobacterium woodii DSM 1030]
Length = 296
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 2/111 (1%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIFR 71
LSI+ Q + ++ F +P F+PKP+VD VV P I L K L VV F
Sbjct: 172 LSIVAQFYADISIDFEVPAHVFMPKPKVDSIVVTLKKLTKPKIVLENKDLFLAVVKASFL 231
Query: 72 YRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQICLA 122
R+K + ++ P K ++++ +LE + P +R L+ +FG+I A
Sbjct: 232 NRRKTLINGLTMNTPFDK-EVLLEVLEACEISPGIRGEALTGADFGRIANA 281
>gi|357239499|ref|ZP_09126834.1| dimethyladenosine transferase [Streptococcus ictaluri 707-05]
gi|356752068|gb|EHI69198.1| dimethyladenosine transferase [Streptococcus ictaluri 707-05]
Length = 290
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 3/116 (2%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDL-PFKLIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ R P+I + RV F
Sbjct: 172 LSIAVQYYTTAKVAFIVPRTVFVPAPNVDSAILKMVRRDQPLISVQDENFFFRVSKVGFV 231
Query: 72 YRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEFGQICLAYRD 125
+R+K ++ + F K + + + L A +KP +R LS+Q+FG++ A ++
Sbjct: 232 HRRKTLWNNLTSHFGKSEDTKAKLEKGLALADIKPSIRGEALSIQDFGRLADALKE 287
>gi|422880875|ref|ZP_16927331.1| dimethyladenosine transferase [Streptococcus sanguinis SK355]
gi|332365863|gb|EGJ43620.1| dimethyladenosine transferase [Streptococcus sanguinis SK355]
Length = 290
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 3/115 (2%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDL-PFKLIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ R P + + K +V F
Sbjct: 172 LSIAVQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRDQPAVAVQDEKFFFKVSKASFV 231
Query: 72 YRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEFGQICLAYR 124
+R+K ++ + F K + + + + LERA + P +R LS++EF ++ A +
Sbjct: 232 HRRKTLWNNLTSYFGKSEETKGKLSAALERADLSPSVRGEALSLEEFARLADALK 286
>gi|15672672|ref|NP_266846.1| dimethyladenosine transferase [Lactococcus lactis subsp. lactis
Il1403]
gi|281491189|ref|YP_003353169.1| dimethyladenosine transferase [Lactococcus lactis subsp. lactis
KF147]
gi|385830227|ref|YP_005868040.1| dimethyladenosine transferase [Lactococcus lactis subsp. lactis
CV56]
gi|418036990|ref|ZP_12675381.1| Methyltransferase [Lactococcus lactis subsp. cremoris CNCM I-1631]
gi|27151600|sp|Q9CHN8.1|RSMA_LACLA RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|12723599|gb|AAK04788.1|AE006302_6 kasugamycin dimethyltransferase [Lactococcus lactis subsp. lactis
Il1403]
gi|281374930|gb|ADA64448.1| Dimethyladenosine transferase [Lactococcus lactis subsp. lactis
KF147]
gi|326406235|gb|ADZ63306.1| dimethyladenosine transferase [Lactococcus lactis subsp. lactis
CV56]
gi|354695135|gb|EHE94757.1| Methyltransferase [Lactococcus lactis subsp. cremoris CNCM I-1631]
Length = 294
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 1/111 (0%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF-KLIERVVSCIFR 71
LSI Q + F +P FIP P VD ++ R P++++ + + + F
Sbjct: 178 LSIAVQYYMEASVAFIVPRTVFIPAPNVDSAILKMVRREAPLVEVEDEEWFFKTMHSSFV 237
Query: 72 YRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQICLA 122
+R+K + F K + + LL +A + P +R LS++EF ++ A
Sbjct: 238 HRRKTLMNNLQAAFGKESKPEIEKLLAQAEISPTIRGEALSIEEFAKLADA 288
>gi|423439778|ref|ZP_17416684.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG4X2-1]
gi|423450061|ref|ZP_17426940.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG5O-1]
gi|423462850|ref|ZP_17439618.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG6O-1]
gi|423532206|ref|ZP_17508624.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
HuB2-9]
gi|423542523|ref|ZP_17518913.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
HuB4-10]
gi|401127068|gb|EJQ34798.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG5O-1]
gi|401168319|gb|EJQ75584.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
HuB4-10]
gi|402421821|gb|EJV54068.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG4X2-1]
gi|402422978|gb|EJV55199.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG6O-1]
gi|402465284|gb|EJV96966.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
HuB2-9]
Length = 292
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 5/126 (3%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G ++ LSI Q + V+ T+P F+P+P VD ++ R P++++ +
Sbjct: 161 LAAKPGTKEYGSLSIAIQYYTEVETVMTVPRTVFVPQPNVDSAIIRLLKRPKPVVEVTNE 220
Query: 61 -LIERVVSCIFRYRQKQVYKPASLL---FPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
VV F R+K + S FPK K +L+ +L + P R LS++EF
Sbjct: 221 TFFFEVVRASFAQRRKTLMNNLSNNLNGFPKDK-ELLDRILTEVGIDPKRRGETLSIEEF 279
Query: 117 GQICLA 122
+ A
Sbjct: 280 ATLSNA 285
>gi|345429513|ref|YP_004822631.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Haemophilus parainfluenzae T3T1]
gi|301155574|emb|CBW15042.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Haemophilus parainfluenzae T3T1]
Length = 287
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Query: 12 RLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDLPFKLIERVVSC 68
RL+IM Q +C V +P AF P P+VD VV P HP+ DL + + RV S
Sbjct: 164 RLTIMAQYFCQVMPVLEVPPSAFKPAPKVDSAVVRLIPHKELPHPVKDLYW--LNRVCSQ 221
Query: 69 IFRYRQKQVYKPASLLF-PKRKRQLVVSLLERA 100
F R+K + S LF P+ L + L RA
Sbjct: 222 AFNQRRKTLRNALSTLFSPENLTALGIGLNARA 254
>gi|161830385|ref|YP_001595993.1| dimethyladenosine transferase [Coxiella burnetii RSA 331]
gi|226729775|sp|A9N9I7.1|RSMA_COXBR RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|161762252|gb|ABX77894.1| dimethyladenosine transferase [Coxiella burnetii RSA 331]
Length = 258
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 61/123 (49%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G RLS+M + +C+ + FT+ +AF P P+V+ ++ PR H +
Sbjct: 141 ITAEVGSHDYGRLSVMAKYFCDNTYLFTVSPQAFTPPPRVESAIIRLIPR-HNFTPVAKN 199
Query: 61 L--IERVVSCIFRYRQKQVYKP-ASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
L + VV F YR+K V L+ P + LLE + P LRP +L+V++F
Sbjct: 200 LDQLSHVVKEAFSYRRKTVGNALKKLINPSQ-----WPLLE---INPQLRPQELTVEDFV 251
Query: 118 QIC 120
+I
Sbjct: 252 KIS 254
>gi|347751682|ref|YP_004859247.1| ribosomal RNA small subunit methyltransferase A [Bacillus coagulans
36D1]
gi|347584200|gb|AEP00467.1| Ribosomal RNA small subunit methyltransferase A [Bacillus coagulans
36D1]
Length = 295
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 3/123 (2%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-L 61
A G + LSI Q + + +P F+P+P VD VV R P +++ +
Sbjct: 164 AVPGTKNYGTLSIAIQYYMTAEVAMIVPKTVFMPQPNVDSAVVKLVKRDKPKVEVKDEAF 223
Query: 62 IERVVSCIFRYRQKQVYKPASLLFP--KRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
+V F R+K + + P K K++ ++S+LE+ ++P R LS++EF +
Sbjct: 224 FFQVAKASFAQRRKTLINNLTAGLPGGKDKKETLLSVLEQLKIEPSRRGETLSLEEFAAL 283
Query: 120 CLA 122
A
Sbjct: 284 SNA 286
>gi|93006282|ref|YP_580719.1| dimethyladenosine transferase [Psychrobacter cryohalolentis K5]
gi|119365050|sp|Q1QAR8.1|RSMA_PSYCK RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|92393960|gb|ABE75235.1| dimethyladenosine transferase [Psychrobacter cryohalolentis K5]
Length = 287
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 59/125 (47%), Gaps = 11/125 (8%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPR-VHPIIDLPF 59
+ A G + RLS++ Q C+ D+ T+P AF P P+V V TP + P++
Sbjct: 161 ITADVGSKTYGRLSVIMQYHCHTDYLLTVPRGAFNPPPKVTSAVFRLTPHIIKPVVAEDE 220
Query: 60 KLIERVVSCIFRYRQKQ---VYKPASLLFPKRKRQLVVSLLERAC-VKPILRPYQLSVQE 115
+ VV F +R+K ++K ++LL + AC + P RP LSV++
Sbjct: 221 EYFALVVRETFNHRRKTLRAIFKKSTLLPTLSEDDFA------ACAIDPQARPETLSVKD 274
Query: 116 FGQIC 120
F +
Sbjct: 275 FVNLS 279
>gi|145633499|ref|ZP_01789228.1| dimethyladenosine transferase [Haemophilus influenzae 3655]
gi|144985868|gb|EDJ92476.1| dimethyladenosine transferase [Haemophilus influenzae 3655]
Length = 287
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Query: 12 RLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDLPFKLIERVVSC 68
RL+IM Q +C V +P AF P P+VD VV P HP+ DL + + RV S
Sbjct: 164 RLTIMAQYFCQVMPVLEVPPSAFKPAPKVDSAVVRLIPHKELPHPVKDLYW--LNRVCSQ 221
Query: 69 IFRYRQKQVYKPASLLF-PKRKRQLVVSLLERA 100
F R+K + S LF P+ L + L RA
Sbjct: 222 AFNQRRKTLRNALSTLFSPENLTALGIDLNARA 254
>gi|373467170|ref|ZP_09558471.1| dimethyladenosine transferase [Haemophilus sp. oral taxon 851 str.
F0397]
gi|371759129|gb|EHO47875.1| dimethyladenosine transferase [Haemophilus sp. oral taxon 851 str.
F0397]
Length = 288
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Query: 12 RLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDLPFKLIERVVSC 68
RL+IM Q +C V +P AF P P+VD VV P HP+ DL + + RV S
Sbjct: 164 RLTIMAQYFCQVMPVLEVPPSAFKPAPKVDSAVVRLIPHKELPHPVKDLYW--LNRVCSQ 221
Query: 69 IFRYRQKQVYKPASLLF-PKRKRQLVVSLLERA 100
F R+K + S LF P+ L + L RA
Sbjct: 222 AFNQRRKTLRNALSTLFSPENLTALGIDLNARA 254
>gi|68249146|ref|YP_248258.1| dimethyladenosine transferase [Haemophilus influenzae 86-028NP]
gi|145635368|ref|ZP_01791070.1| dimethyladenosine transferase [Haemophilus influenzae PittAA]
gi|81336447|sp|Q4QMZ9.1|RSMA_HAEI8 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|68057345|gb|AAX87598.1| dimethyladenosine transferase [Haemophilus influenzae 86-028NP]
gi|145267374|gb|EDK07376.1| dimethyladenosine transferase [Haemophilus influenzae PittAA]
Length = 287
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Query: 12 RLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDLPFKLIERVVSC 68
RL+IM Q +C V +P AF P P+VD VV P HP+ DL + + RV S
Sbjct: 164 RLTIMAQYFCQVMPVLEVPPSAFKPAPKVDSAVVRLIPHKELPHPVKDLYW--LNRVCSQ 221
Query: 69 IFRYRQKQVYKPASLLF-PKRKRQLVVSLLERA 100
F R+K + S LF P+ L + L RA
Sbjct: 222 AFNQRRKTLRNALSTLFSPENLTALGIDLNARA 254
>gi|422591071|ref|ZP_16665720.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. morsprunorum str. M302280]
gi|330878396|gb|EGH12545.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. morsprunorum str. M302280]
Length = 268
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 55/123 (44%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
M A G RLSIM Q C V+H F + AF P P+VD +V P HP D
Sbjct: 145 MAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPYETLPHPAKD- 203
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ERVV F R+K + LL + + + V LRP QL + F
Sbjct: 204 -HRVLERVVREAFNQRRKTLRNTLRLLLSSDE-------ITASGVDGSLRPEQLDLAAFV 255
Query: 118 QIC 120
++
Sbjct: 256 RLA 258
>gi|300853385|ref|YP_003778369.1| dimethyladenosine transferase [Clostridium ljungdahlii DSM 13528]
gi|300433500|gb|ADK13267.1| dimethyladenosine transferase [Clostridium ljungdahlii DSM 13528]
Length = 280
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 63/122 (51%), Gaps = 5/122 (4%)
Query: 8 EQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLP-FKLIERVV 66
+Q LSI+ Q +C+V+ + +FIP+P+V+ V+ T P + + KL +VV
Sbjct: 160 KQYGALSILVQYYCDVEVIRKVSPLSFIPRPKVESIVIKLTKLDEPRVKVKDKKLFFKVV 219
Query: 67 SCIFRYRQKQVYKPA-SLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQICLAYRD 125
C F R+K ++ +L PK + + ++A + R LS++EFG++ D
Sbjct: 220 RCSFNMRRKTLWNAVKTLKVPKEDME---AAFKKAEIDEKRRGETLSIEEFGRLSDCIYD 276
Query: 126 MC 127
+C
Sbjct: 277 IC 278
>gi|260582745|ref|ZP_05850532.1| dimethyladenosine transferase [Haemophilus influenzae NT127]
gi|260094195|gb|EEW78096.1| dimethyladenosine transferase [Haemophilus influenzae NT127]
Length = 287
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Query: 12 RLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDLPFKLIERVVSC 68
RL+IM Q +C V +P AF P P+VD VV P HP+ DL + + RV S
Sbjct: 164 RLTIMAQYFCQVMPVLEVPPSAFKPAPKVDSAVVRLIPNKELPHPVKDLYW--LNRVCSQ 221
Query: 69 IFRYRQKQVYKPASLLF-PKRKRQLVVSLLERA 100
F R+K + S LF P+ L + L RA
Sbjct: 222 AFNQRRKTLRNALSTLFSPENLTALGIDLNARA 254
>gi|308066864|ref|YP_003868469.1| dimethyladenosine transferase [Paenibacillus polymyxa E681]
gi|305856143|gb|ADM67931.1| Dimethyladenosine transferase [Paenibacillus polymyxa E681]
Length = 294
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 2/122 (1%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIID-LPF 59
M A+ G + LSI Q + + +P FIP+P V+ V+ R P ++ +
Sbjct: 164 MAASPGTKDYGSLSIAVQYYSEPELVCIVPNTVFIPQPNVESAVIRLRVREAPPVEVVDE 223
Query: 60 KLIERVVSCIFRYRQKQVYKP-ASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQ 118
K VV F R+K + S F K R + LL++A ++P R LS++EF +
Sbjct: 224 KHFFEVVHAAFAQRRKTISNNLKSRFFTKENRDTLEPLLQQAGIEPSRRGETLSIEEFAR 283
Query: 119 IC 120
+
Sbjct: 284 LS 285
>gi|328544016|ref|YP_004304125.1| ribosomal RNA small subunit methyltransferase A [Polymorphum gilvum
SL003B-26A1]
gi|326413760|gb|ADZ70823.1| Ribosomal RNA small subunit methyltransferase A [Polymorphum gilvum
SL003B-26A1]
Length = 283
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 56/124 (45%), Gaps = 8/124 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A G + RL ++ F I +AF P P+V VV PRV P + K
Sbjct: 161 IVAAPGDKAYGRLGVLAGWRTQARILFDISPQAFTPPPKVTSAVVQLVPRVEP-LPCSLK 219
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
+ERV + F R+K + L P+ +R L+E A + P R ++ + F +
Sbjct: 220 ALERVTAAAFGQRRKMLRASLKTLDPQAER-----LIEEAGLIPTARAEEIDIAGF--VA 272
Query: 121 LAYR 124
LA R
Sbjct: 273 LAER 276
>gi|381166246|ref|ZP_09875463.1| Dimethyladenosine transferase (S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase) (16S rRNA
dimethylase) (High level kasugamycin resistance protein
ksgA) (Kasugamycin dimethyltransferase) [Phaeospirillum
molischianum DSM 120]
gi|380684693|emb|CCG40275.1| Dimethyladenosine transferase (S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase) (16S rRNA
dimethylase) (High level kasugamycin resistance protein
ksgA) (Kasugamycin dimethyltransferase) [Phaeospirillum
molischianum DSM 120]
Length = 279
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 37/77 (48%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G Q RLS++ Q C V F + +AF P P V V PR P+ F+
Sbjct: 154 LAAAPGSSQYGRLSVITQWLCEVRPLFNVDRRAFTPPPTVTSTVAEIIPRPAPLAPARFE 213
Query: 61 LIERVVSCIFRYRQKQV 77
+ERV + F R+K +
Sbjct: 214 TMERVTAAAFGQRRKML 230
>gi|365846579|ref|ZP_09387081.1| dimethyladenosine transferase [Yokenella regensburgei ATCC 43003]
gi|364573711|gb|EHM51198.1| dimethyladenosine transferase [Yokenella regensburgei ATCC 43003]
Length = 273
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 56/123 (45%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +C + +P AF P P+VD VV P +P+ ++
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCQIIPVLEVPPGAFTPPPKVDSAVVRLVPHAVPPNPVKNI 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+ + R+ + F R+K + +F V +L + P LR +SV ++
Sbjct: 208 --RALSRITTEAFNQRRKTIRNSLGNVFS-------VEVLNELGIDPALRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QLA 261
>gi|417841165|ref|ZP_12487270.1| Ribosomal RNA small subunit methyltransferase A [Haemophilus
haemolyticus M19501]
gi|417841959|ref|ZP_12488054.1| Ribosomal RNA small subunit methyltransferase A [Haemophilus
haemolyticus M19501]
gi|341947739|gb|EGT74380.1| Ribosomal RNA small subunit methyltransferase A [Haemophilus
haemolyticus M19501]
gi|341949759|gb|EGT76360.1| Ribosomal RNA small subunit methyltransferase A [Haemophilus
haemolyticus M19501]
Length = 287
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Query: 12 RLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDLPFKLIERVVSC 68
RL+IM Q +C V +P AF P P+VD VV P HP+ DL + + RV S
Sbjct: 164 RLTIMAQYFCQVMPVLEVPPSAFKPAPKVDSAVVRLIPHKELPHPVKDLYW--LNRVCSQ 221
Query: 69 IFRYRQKQVYKPASLLF-PKRKRQLVVSLLERA 100
F R+K + S LF P+ L + L RA
Sbjct: 222 AFNQRRKTLRNALSTLFSPENLTALGIDLNARA 254
>gi|222445676|ref|ZP_03608191.1| hypothetical protein METSMIALI_01317 [Methanobrevibacter smithii
DSM 2375]
gi|222435241|gb|EEE42406.1| dimethyladenosine transferase [Methanobrevibacter smithii DSM 2375]
Length = 306
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 12/84 (14%)
Query: 6 GMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPR------------VHP 53
G + RLS M C+VD + ++FIPKP+VD VV TP+ ++
Sbjct: 163 GSKDYSRLSAMLYFKCDVDLLTGVSAESFIPKPKVDSTVVRLTPKLPELNGQLKHLNINE 222
Query: 54 IIDLPFKLIERVVSCIFRYRQKQV 77
I + FK + V +F++R K+V
Sbjct: 223 INEKDFKTYSKFVKALFQHRNKKV 246
>gi|445116674|ref|ZP_21378600.1| dimethyladenosine transferase [Prevotella nigrescens F0103]
gi|444840005|gb|ELX67048.1| dimethyladenosine transferase [Prevotella nigrescens F0103]
Length = 266
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 53/108 (49%), Gaps = 5/108 (4%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFKLIERVVSCIFRY 72
LS++ Q W +V++ FT+ F P P+V V+ T +D KL +R+V +F
Sbjct: 152 LSVLIQAWYDVEYLFTVDEDVFNPPPKVKSAVIRMTRNSVSKLDCSEKLFKRLVKTVFNQ 211
Query: 73 RQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
R+K + +FP + R+ E+ + RP L++ +F ++
Sbjct: 212 RRKMLRVSLRQMFPAKPRE---GFYEQEVMTN--RPEHLTIAQFVELT 254
>gi|153827422|ref|ZP_01980089.1| dimethyladenosine transferase [Vibrio cholerae MZO-2]
gi|149738665|gb|EDM53008.1| dimethyladenosine transferase [Vibrio cholerae MZO-2]
Length = 282
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 57/122 (46%), Gaps = 18/122 (14%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G + RL++M Q +C V +P AF+P P+VD VV P HP L
Sbjct: 158 LAAGPGTKAYGRLTVMAQYYCKVVPVLEVPPNAFVPPPKVDSAVVRLVPYEDLPHPATSL 217
Query: 58 PFKLIERVVSCIFRYRQKQV---YKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQ 114
+ ++RVV F R+K V YK L P+ LE + P +RP L++
Sbjct: 218 EW--LDRVVREGFNQRRKTVRNCYK--GLAEPE--------TLETLGINPGMRPENLTLA 265
Query: 115 EF 116
+F
Sbjct: 266 QF 267
>gi|194467627|ref|ZP_03073614.1| dimethyladenosine transferase [Lactobacillus reuteri 100-23]
gi|194454663|gb|EDX43560.1| dimethyladenosine transferase [Lactobacillus reuteri 100-23]
Length = 297
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 63/127 (49%), Gaps = 6/127 (4%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF- 59
+ A G +Q L++ + F + K F+P P VD +V TPR +P+ PF
Sbjct: 165 LTAKPGTKQYGALTLAIEYQMQAKIAFDVSRKVFVPSPNVDSAIVVLTPRTNPLPVQPFD 224
Query: 60 --KLIERVVSCIFRYRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQE 115
KL + C F +R+K ++ + K ++ + ++L + + P +RP +L++++
Sbjct: 225 KQKLFGFIRGC-FAHRRKSLWNNLQSVIGKDPAVKEKMTAVLAQLDISPQIRPEKLTLEQ 283
Query: 116 FGQICLA 122
F ++ A
Sbjct: 284 FIELANA 290
>gi|30018312|ref|NP_829943.1| dimethyladenosine transferase [Bacillus cereus ATCC 14579]
gi|75759603|ref|ZP_00739689.1| Dimethyladenosine transferase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|218232555|ref|YP_002364891.1| dimethyladenosine transferase [Bacillus cereus B4264]
gi|218895177|ref|YP_002443588.1| dimethyladenosine transferase [Bacillus cereus G9842]
gi|296500873|ref|YP_003662573.1| dimethyladenosine transferase [Bacillus thuringiensis BMB171]
gi|365164140|ref|ZP_09360225.1| ribosomal RNA small subunit methyltransferase A [Bacillus sp.
7_6_55CFAA_CT2]
gi|384184124|ref|YP_005570020.1| dimethyladenosine transferase [Bacillus thuringiensis serovar
chinensis CT-43]
gi|402562867|ref|YP_006605591.1| KsgA/Dim1 family 16S ribosomal RNA methyltransferase [Bacillus
thuringiensis HD-771]
gi|410672413|ref|YP_006924784.1| ribosomal RNA small subunit methyltransferase A [Bacillus
thuringiensis Bt407]
gi|423364604|ref|ZP_17342073.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD022]
gi|423387006|ref|ZP_17364261.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG1X1-2]
gi|423410733|ref|ZP_17387853.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG3O-2]
gi|423427594|ref|ZP_17404625.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG3X2-2]
gi|423433483|ref|ZP_17410487.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG4O-1]
gi|423438922|ref|ZP_17415903.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG4X12-1]
gi|423506603|ref|ZP_17483192.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
HD73]
gi|423526660|ref|ZP_17503105.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
HuB1-1]
gi|423565601|ref|ZP_17541876.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
MSX-A1]
gi|423589340|ref|ZP_17565426.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD045]
gi|423632839|ref|ZP_17608584.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD154]
gi|423644678|ref|ZP_17620295.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD166]
gi|423651362|ref|ZP_17626932.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD169]
gi|423658436|ref|ZP_17633735.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD200]
gi|434378684|ref|YP_006613328.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Bacillus thuringiensis HD-789]
gi|449086707|ref|YP_007419148.1| dimethyladenosine transferase [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|452196417|ref|YP_007476498.1| SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
gi|33516920|sp|Q81JA5.1|RSMA_BACCR RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226729753|sp|B7ISV1.1|RSMA_BACC2 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226729754|sp|B7HIK9.1|RSMA_BACC4 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|29893852|gb|AAP07144.1| Dimethyladenosine transferase [Bacillus cereus ATCC 14579]
gi|74492894|gb|EAO56024.1| Dimethyladenosine transferase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|218160512|gb|ACK60504.1| dimethyladenosine transferase [Bacillus cereus B4264]
gi|218541640|gb|ACK94034.1| dimethyladenosine transferase [Bacillus cereus G9842]
gi|296321925|gb|ADH04853.1| dimethyladenosine transferase [Bacillus thuringiensis BMB171]
gi|326937833|gb|AEA13729.1| dimethyladenosine transferase [Bacillus thuringiensis serovar
chinensis CT-43]
gi|363613155|gb|EHL64677.1| ribosomal RNA small subunit methyltransferase A [Bacillus sp.
7_6_55CFAA_CT2]
gi|401072716|gb|EJP81178.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD022]
gi|401107989|gb|EJQ15925.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG3X2-2]
gi|401109964|gb|EJQ17881.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG3O-2]
gi|401111546|gb|EJQ19435.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG4O-1]
gi|401115410|gb|EJQ23262.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG4X12-1]
gi|401193678|gb|EJR00682.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
MSX-A1]
gi|401223993|gb|EJR30553.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD045]
gi|401258883|gb|EJR65064.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD154]
gi|401269462|gb|EJR75492.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD166]
gi|401278414|gb|EJR84347.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD169]
gi|401287769|gb|EJR93540.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD200]
gi|401630260|gb|EJS48066.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG1X1-2]
gi|401791519|gb|AFQ17558.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Bacillus thuringiensis HD-771]
gi|401877241|gb|AFQ29408.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Bacillus thuringiensis HD-789]
gi|402447428|gb|EJV79280.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
HD73]
gi|402455153|gb|EJV86937.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
HuB1-1]
gi|409171542|gb|AFV15847.1| ribosomal RNA small subunit methyltransferase A [Bacillus
thuringiensis Bt407]
gi|449020464|gb|AGE75627.1| dimethyladenosine transferase [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|452101810|gb|AGF98749.1| SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
Length = 292
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 5/126 (3%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G ++ LSI Q + V+ T+P F+P+P VD ++ R P++++ +
Sbjct: 161 LAAKPGTKEYGSLSIAIQYYTEVETVMTVPRTVFVPQPNVDSAIIRLLKRPKPVVEVTDE 220
Query: 61 -LIERVVSCIFRYRQKQVYKPASLL---FPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
VV F R+K + S FPK K +L+ +L + P R LS++EF
Sbjct: 221 TFFFEVVRASFAQRRKTLMNNLSNNLNGFPKDK-ELLDRILTEVGIDPKRRGETLSIEEF 279
Query: 117 GQICLA 122
+ A
Sbjct: 280 ATLSNA 285
>gi|419802682|ref|ZP_14327867.1| dimethyladenosine transferase [Haemophilus parainfluenzae HK262]
gi|419845734|ref|ZP_14368998.1| dimethyladenosine transferase [Haemophilus parainfluenzae HK2019]
gi|385189864|gb|EIF37319.1| dimethyladenosine transferase [Haemophilus parainfluenzae HK262]
gi|386415095|gb|EIJ29633.1| dimethyladenosine transferase [Haemophilus parainfluenzae HK2019]
Length = 288
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Query: 12 RLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDLPFKLIERVVSC 68
RL+IM Q +C V +P AF P P+VD VV P HP+ DL + + RV S
Sbjct: 164 RLTIMAQYFCQVMPVLEVPPSAFKPAPKVDSAVVRLIPHKELPHPVKDLYW--LNRVCSQ 221
Query: 69 IFRYRQKQVYKPASLLF-PKRKRQLVVSLLERA 100
F R+K + S LF P+ L + L RA
Sbjct: 222 AFNQRRKTLRNALSTLFSPENLTALGIDLNARA 254
>gi|148643434|ref|YP_001273947.1| dimethyladenosine transferase [Methanobrevibacter smithii ATCC
35061]
gi|148552451|gb|ABQ87579.1| dimethyladenosine transferase, KsgA [Methanobrevibacter smithii
ATCC 35061]
Length = 303
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 12/84 (14%)
Query: 6 GMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPR------------VHP 53
G + RLS M C+VD + ++FIPKP+VD VV TP+ ++
Sbjct: 160 GSKDYSRLSAMLYFKCDVDLLTGVSAESFIPKPKVDSTVVRLTPKLPELNGQLKHLNINE 219
Query: 54 IIDLPFKLIERVVSCIFRYRQKQV 77
I + FK + V +F++R K+V
Sbjct: 220 INEKDFKTYSKFVKALFQHRNKKV 243
>gi|145638541|ref|ZP_01794150.1| dimethyladenosine transferase [Haemophilus influenzae PittII]
gi|145272136|gb|EDK12044.1| dimethyladenosine transferase [Haemophilus influenzae PittII]
Length = 287
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Query: 12 RLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDLPFKLIERVVSC 68
RL+IM Q +C V +P AF P P+VD VV P HP+ DL + + RV S
Sbjct: 164 RLTIMAQYFCQVMPVLEVPPSAFKPAPKVDSAVVRLIPHKELPHPVKDLYW--LNRVCSQ 221
Query: 69 IFRYRQKQVYKPASLLF-PKRKRQLVVSLLERA 100
F R+K + S LF P+ L + L RA
Sbjct: 222 AFNQRRKTLRNALSTLFSPENLTALGIDLNARA 254
>gi|378696747|ref|YP_005178705.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Haemophilus influenzae 10810]
gi|301169266|emb|CBW28863.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Haemophilus influenzae 10810]
Length = 287
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Query: 12 RLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDLPFKLIERVVSC 68
RL+IM Q +C V +P AF P P+VD VV P HP+ DL + + RV S
Sbjct: 164 RLTIMAQYFCQVMPVLEVPPSAFKPAPKVDSAVVRLIPHKELPHPVKDLYW--LNRVCSQ 221
Query: 69 IFRYRQKQVYKPASLLF-PKRKRQLVVSLLERA 100
F R+K + S LF P+ L + L RA
Sbjct: 222 AFNQRRKTLRNALSTLFSPENLTALGIDLNARA 254
>gi|229159215|ref|ZP_04287240.1| Dimethyladenosine transferase [Bacillus cereus R309803]
gi|228624230|gb|EEK81031.1| Dimethyladenosine transferase [Bacillus cereus R309803]
Length = 220
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 5/126 (3%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G ++ LSI Q + V+ T+P F+P+P VD ++ R P++++ +
Sbjct: 89 LAAKPGTKEYGSLSIAIQYYTEVETVMTVPRTVFVPQPNVDSAIIRLLKRPKPVVEVADE 148
Query: 61 -LIERVVSCIFRYRQKQVYKPASLL---FPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
VV F R+K + S FPK K +L+ +L + P R LS++EF
Sbjct: 149 TFFFEVVRASFAQRRKTLMNNLSNNLNGFPKDK-ELLNQILTEVGIDPKRRGETLSIEEF 207
Query: 117 GQICLA 122
+ A
Sbjct: 208 ATLSNA 213
>gi|288869605|ref|ZP_05975193.2| dimethyladenosine transferase [Methanobrevibacter smithii DSM 2374]
gi|288860560|gb|EFC92858.1| dimethyladenosine transferase [Methanobrevibacter smithii DSM 2374]
Length = 306
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 12/84 (14%)
Query: 6 GMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPR------------VHP 53
G + RLS M C+VD + ++FIPKP+VD VV TP+ ++
Sbjct: 163 GSKDYSRLSAMLYFKCDVDLLTGVSAESFIPKPKVDSTVVRLTPKLPELNGQLKHLNINE 222
Query: 54 IIDLPFKLIERVVSCIFRYRQKQV 77
I + FK + V +F++R K+V
Sbjct: 223 INEKDFKTYSKFVKALFQHRNKKV 246
>gi|145630268|ref|ZP_01786049.1| dimethyladenosine transferase [Haemophilus influenzae R3021]
gi|144984003|gb|EDJ91440.1| dimethyladenosine transferase [Haemophilus influenzae R3021]
Length = 287
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Query: 12 RLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDLPFKLIERVVSC 68
RL+IM Q +C V +P AF P P+VD VV P HP+ DL + + RV S
Sbjct: 164 RLTIMAQYFCQVMPVLEVPPSAFKPAPKVDSAVVRLIPHKELPHPVKDLYW--LNRVCSQ 221
Query: 69 IFRYRQKQVYKPASLLF-PKRKRQLVVSLLERA 100
F R+K + S LF P+ L + L RA
Sbjct: 222 AFNQRRKTLRNALSTLFSPENLTALGIDLNARA 254
>gi|419838559|ref|ZP_14361984.1| dimethyladenosine transferase [Haemophilus haemolyticus HK386]
gi|386910324|gb|EIJ74981.1| dimethyladenosine transferase [Haemophilus haemolyticus HK386]
Length = 287
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Query: 12 RLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDLPFKLIERVVSC 68
RL+IM Q +C V +P AF P P+VD VV P HP+ DL + + RV S
Sbjct: 164 RLTIMAQYFCQVMPVLEVPPSAFKPAPKVDSAVVRLIPHKELPHPVKDLYW--LNRVCSQ 221
Query: 69 IFRYRQKQVYKPASLLF-PKRKRQLVVSLLERA 100
F R+K + S LF P+ L + L RA
Sbjct: 222 AFNQRRKTLRNALSTLFSPENLTALGIDLNARA 254
>gi|407789949|ref|ZP_11137047.1| dimethyladenosine transferase [Gallaecimonas xiamenensis 3-C-1]
gi|407205771|gb|EKE75739.1| dimethyladenosine transferase [Gallaecimonas xiamenensis 3-C-1]
Length = 260
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 57/130 (43%), Gaps = 8/130 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPF 59
M A G +Q RLS+M Q +C V + ++F P P+VD VV P +V P
Sbjct: 137 MAAGPGSKQYGRLSVMTQYFCQVIPVLVVGPESFKPAPKVDSAVVRLVPHKVKPYPVKDE 196
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
K + ++++ F R+K V K+ LE V P RP LS+ ++ +
Sbjct: 197 KRLSQLLTEAFNQRRKTVRN-------TFKQHFTGEQLEALGVDPAARPENLSLAQYCTL 249
Query: 120 CLAYRDMCEE 129
A D E
Sbjct: 250 ADALTDALAE 259
>gi|377555957|ref|ZP_09785681.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[endosymbiont of Bathymodiolus sp.]
Length = 255
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 54/101 (53%), Gaps = 5/101 (4%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
M+A G + RLS+M Q + V+ FT+P ++F P P+VD +V+ P + P +
Sbjct: 137 MVAENGSKTYGRLSVMMQAFFEVELIFTVPPESFEPAPKVDSAIVYLKP-LAPSKVSNTE 195
Query: 61 LIERVVSCIFRYRQKQVYK-PASLLFPKRKRQLVVSLLERA 100
L E++V F R+K + SLL ++Q + L +RA
Sbjct: 196 LFEKIVKAAFSQRRKTLGNCLKSLLL---QQQTTIDLSQRA 233
>gi|312104020|ref|XP_003150298.1| hypothetical protein LOAG_14757 [Loa loa]
Length = 122
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKR-KRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
++E+V +F YRQK V K L+P+ + L LL R + P L V++F I
Sbjct: 1 VVEKVCRRVFNYRQKYVVKGIRSLYPEELAKNLADDLLRRCRIDPTTTAICLGVEQFADI 60
Query: 120 CLAYRDMCEEMPGLYEY 136
C Y + C + PG++ Y
Sbjct: 61 CYVYEEHCRKYPGVFLY 77
>gi|319775528|ref|YP_004138016.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Haemophilus influenzae F3047]
gi|329122429|ref|ZP_08251016.1| dimethyladenosine transferase [Haemophilus aegyptius ATCC 11116]
gi|317450119|emb|CBY86333.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Haemophilus influenzae F3047]
gi|327473711|gb|EGF19130.1| dimethyladenosine transferase [Haemophilus aegyptius ATCC 11116]
Length = 287
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Query: 12 RLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDLPFKLIERVVSC 68
RL+IM Q +C V +P AF P P+VD VV P HP+ DL + + RV S
Sbjct: 164 RLTIMAQYFCQVMPVLEVPPSAFKPAPKVDSAVVRLIPHKELPHPVKDLYW--LNRVCSQ 221
Query: 69 IFRYRQKQVYKPASLLF-PKRKRQLVVSLLERA 100
F R+K + S LF P+ L + L RA
Sbjct: 222 AFNQRRKTLRNALSTLFSPENLTALGIDLNARA 254
>gi|30260231|ref|NP_842608.1| dimethyladenosine transferase [Bacillus anthracis str. Ames]
gi|42779120|ref|NP_976367.1| dimethyladenosine transferase [Bacillus cereus ATCC 10987]
gi|47525294|ref|YP_016643.1| dimethyladenosine transferase [Bacillus anthracis str. 'Ames
Ancestor']
gi|47569890|ref|ZP_00240557.1| dimethyladenosine transferase [Bacillus cereus G9241]
gi|49183075|ref|YP_026327.1| dimethyladenosine transferase [Bacillus anthracis str. Sterne]
gi|49477600|ref|YP_034395.1| dimethyladenosine transferase [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|52145175|ref|YP_081654.1| dimethyladenosine transferase [Bacillus cereus E33L]
gi|65317501|ref|ZP_00390460.1| COG0030: Dimethyladenosine transferase (rRNA methylation) [Bacillus
anthracis str. A2012]
gi|165872549|ref|ZP_02217181.1| dimethyladenosine transferase [Bacillus anthracis str. A0488]
gi|167635072|ref|ZP_02393389.1| dimethyladenosine transferase [Bacillus anthracis str. A0442]
gi|167641541|ref|ZP_02399789.1| dimethyladenosine transferase [Bacillus anthracis str. A0193]
gi|170688890|ref|ZP_02880092.1| dimethyladenosine transferase [Bacillus anthracis str. A0465]
gi|170707547|ref|ZP_02898000.1| dimethyladenosine transferase [Bacillus anthracis str. A0389]
gi|177655321|ref|ZP_02936850.1| dimethyladenosine transferase [Bacillus anthracis str. A0174]
gi|190568974|ref|ZP_03021875.1| dimethyladenosine transferase [Bacillus anthracis str.
Tsiankovskii-I]
gi|196036349|ref|ZP_03103746.1| dimethyladenosine transferase [Bacillus cereus W]
gi|196041767|ref|ZP_03109057.1| dimethyladenosine transferase [Bacillus cereus NVH0597-99]
gi|206977937|ref|ZP_03238824.1| dimethyladenosine transferase [Bacillus cereus H3081.97]
gi|217957617|ref|YP_002336159.1| dimethyladenosine transferase [Bacillus cereus AH187]
gi|218901242|ref|YP_002449076.1| dimethyladenosine transferase [Bacillus cereus AH820]
gi|222093811|ref|YP_002527860.1| dimethyladenosine transferase [Bacillus cereus Q1]
gi|227812714|ref|YP_002812723.1| dimethyladenosine transferase [Bacillus anthracis str. CDC 684]
gi|229601390|ref|YP_002864692.1| dimethyladenosine transferase [Bacillus anthracis str. A0248]
gi|254682332|ref|ZP_05146193.1| dimethyladenosine transferase [Bacillus anthracis str. CNEVA-9066]
gi|254724182|ref|ZP_05185967.1| dimethyladenosine transferase [Bacillus anthracis str. A1055]
gi|254733577|ref|ZP_05191298.1| dimethyladenosine transferase [Bacillus anthracis str. Western
North America USA6153]
gi|254744655|ref|ZP_05202334.1| dimethyladenosine transferase [Bacillus anthracis str. Kruger B]
gi|254756360|ref|ZP_05208389.1| dimethyladenosine transferase [Bacillus anthracis str. Vollum]
gi|254762416|ref|ZP_05214258.1| dimethyladenosine transferase [Bacillus anthracis str. Australia
94]
gi|300119136|ref|ZP_07056837.1| dimethyladenosine transferase [Bacillus cereus SJ1]
gi|301051777|ref|YP_003789988.1| dimethyladenosine transferase [Bacillus cereus biovar anthracis
str. CI]
gi|375282138|ref|YP_005102571.1| dimethyladenosine transferase [Bacillus cereus NC7401]
gi|384177947|ref|YP_005563709.1| KsgA/Dim1 family 16S ribosomal RNA methyltransferase [Bacillus
thuringiensis serovar finitimus YBT-020]
gi|386733909|ref|YP_006207090.1| Dimethyladenosine transferase [Bacillus anthracis str. H9401]
gi|402554372|ref|YP_006595643.1| KsgA/Dim1 family 16S ribosomal RNA methyltransferase [Bacillus
cereus FRI-35]
gi|421510658|ref|ZP_15957547.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Bacillus anthracis str. UR-1]
gi|421640732|ref|ZP_16081310.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Bacillus anthracis str. BF1]
gi|423357815|ref|ZP_17335407.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
IS075]
gi|423374905|ref|ZP_17352242.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
AND1407]
gi|423554025|ref|ZP_17530351.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
ISP3191]
gi|423571992|ref|ZP_17548208.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
MSX-A12]
gi|423572816|ref|ZP_17548935.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
MSX-D12]
gi|423608134|ref|ZP_17584026.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD102]
gi|33516921|sp|Q81W00.1|RSMA_BACAN RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|62900500|sp|Q63HJ1.1|RSMA_BACCZ RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|62900530|sp|Q6HPX5.1|RSMA_BACHK RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|62900550|sp|Q73FG7.1|RSMA_BACC1 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226729752|sp|B7JK47.1|RSMA_BACC0 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226729755|sp|B7HPV2.1|RSMA_BACC7 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|254807857|sp|C3P9I6.1|RSMA_BACAA RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|254807858|sp|C3LJ13.1|RSMA_BACAC RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|254807860|sp|B9IZC4.1|RSMA_BACCQ RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|30253552|gb|AAP24094.1| dimethyladenosine transferase [Bacillus anthracis str. Ames]
gi|42735035|gb|AAS38975.1| dimethyladenosine transferase [Bacillus cereus ATCC 10987]
gi|47500442|gb|AAT29118.1| dimethyladenosine transferase [Bacillus anthracis str. 'Ames
Ancestor']
gi|47553424|gb|EAL11808.1| dimethyladenosine transferase [Bacillus cereus G9241]
gi|49177002|gb|AAT52378.1| dimethyladenosine transferase [Bacillus anthracis str. Sterne]
gi|49329156|gb|AAT59802.1| dimethyladenosine transferase [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|51978644|gb|AAU20194.1| dimethyladenosine transferase [Bacillus cereus E33L]
gi|164711677|gb|EDR17222.1| dimethyladenosine transferase [Bacillus anthracis str. A0488]
gi|167510526|gb|EDR85924.1| dimethyladenosine transferase [Bacillus anthracis str. A0193]
gi|167529546|gb|EDR92296.1| dimethyladenosine transferase [Bacillus anthracis str. A0442]
gi|170127543|gb|EDS96417.1| dimethyladenosine transferase [Bacillus anthracis str. A0389]
gi|170667114|gb|EDT17875.1| dimethyladenosine transferase [Bacillus anthracis str. A0465]
gi|172080162|gb|EDT65255.1| dimethyladenosine transferase [Bacillus anthracis str. A0174]
gi|190559898|gb|EDV13882.1| dimethyladenosine transferase [Bacillus anthracis str.
Tsiankovskii-I]
gi|195990979|gb|EDX54950.1| dimethyladenosine transferase [Bacillus cereus W]
gi|196027387|gb|EDX66004.1| dimethyladenosine transferase [Bacillus cereus NVH0597-99]
gi|206743843|gb|EDZ55263.1| dimethyladenosine transferase [Bacillus cereus H3081.97]
gi|217065788|gb|ACJ80038.1| dimethyladenosine transferase [Bacillus cereus AH187]
gi|218538262|gb|ACK90660.1| dimethyladenosine transferase [Bacillus cereus AH820]
gi|221237858|gb|ACM10568.1| dimethyladenosine transferase [Bacillus cereus Q1]
gi|227006542|gb|ACP16285.1| dimethyladenosine transferase [Bacillus anthracis str. CDC 684]
gi|229265798|gb|ACQ47435.1| dimethyladenosine transferase [Bacillus anthracis str. A0248]
gi|298723458|gb|EFI64199.1| dimethyladenosine transferase [Bacillus cereus SJ1]
gi|300373946|gb|ADK02850.1| dimethyladenosine transferase [Bacillus cereus biovar anthracis
str. CI]
gi|324324031|gb|ADY19291.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Bacillus thuringiensis serovar finitimus YBT-020]
gi|358350659|dbj|BAL15831.1| dimethyladenosine transferase [Bacillus cereus NC7401]
gi|384383761|gb|AFH81422.1| Dimethyladenosine transferase [Bacillus anthracis str. H9401]
gi|401073996|gb|EJP82404.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
IS075]
gi|401093387|gb|EJQ01488.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
AND1407]
gi|401182106|gb|EJQ89248.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
ISP3191]
gi|401199126|gb|EJR06036.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
MSX-A12]
gi|401216740|gb|EJR23446.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
MSX-D12]
gi|401238631|gb|EJR45067.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD102]
gi|401795582|gb|AFQ09441.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Bacillus cereus FRI-35]
gi|401819279|gb|EJT18460.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Bacillus anthracis str. UR-1]
gi|403392111|gb|EJY89369.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Bacillus anthracis str. BF1]
Length = 292
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 5/126 (3%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G ++ LSI Q + V+ T+P F+P+P VD ++ R P++++ +
Sbjct: 161 LAAKPGTKEYGSLSIAIQYYTEVETVMTVPRTVFVPQPNVDSAIIRLLKRPKPVVEVTDE 220
Query: 61 -LIERVVSCIFRYRQKQVYKPASLL---FPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
VV F R+K + S FPK K +L+ +L + P R LS++EF
Sbjct: 221 TFFFEVVRASFAQRRKTLMNNLSNNLNGFPKDK-ELLDRILTEVGIDPKRRGETLSIEEF 279
Query: 117 GQICLA 122
+ A
Sbjct: 280 ATLSNA 285
>gi|121591750|ref|ZP_01678961.1| dimethyladenosine transferase [Vibrio cholerae 2740-80]
gi|147673129|ref|YP_001218711.1| dimethyladenosine transferase [Vibrio cholerae O395]
gi|153217221|ref|ZP_01950985.1| dimethyladenosine transferase [Vibrio cholerae 1587]
gi|153803545|ref|ZP_01958131.1| dimethyladenosine transferase [Vibrio cholerae MZO-3]
gi|153820212|ref|ZP_01972879.1| dimethyladenosine transferase [Vibrio cholerae NCTC 8457]
gi|229507082|ref|ZP_04396588.1| dimethyladenosine transferase [Vibrio cholerae BX 330286]
gi|229508763|ref|ZP_04398255.1| dimethyladenosine transferase [Vibrio cholerae B33]
gi|229512627|ref|ZP_04402096.1| dimethyladenosine transferase [Vibrio cholerae TMA 21]
gi|229519750|ref|ZP_04409193.1| dimethyladenosine transferase [Vibrio cholerae RC9]
gi|229519987|ref|ZP_04409416.1| dimethyladenosine transferase [Vibrio cholerae TM 11079-80]
gi|229525136|ref|ZP_04414541.1| dimethyladenosine transferase [Vibrio cholerae bv. albensis VL426]
gi|229530287|ref|ZP_04419675.1| dimethyladenosine transferase [Vibrio cholerae 12129(1)]
gi|229606262|ref|YP_002876910.1| dimethyladenosine transferase [Vibrio cholerae MJ-1236]
gi|254850674|ref|ZP_05240024.1| dimethyladenosine transferase [Vibrio cholerae MO10]
gi|255743826|ref|ZP_05417783.1| dimethyladenosine transferase [Vibrio cholera CIRS 101]
gi|262147179|ref|ZP_06027985.1| dimethyladenosine transferase [Vibrio cholerae INDRE 91/1]
gi|262167593|ref|ZP_06035297.1| dimethyladenosine transferase [Vibrio cholerae RC27]
gi|360037082|ref|YP_004938845.1| dimethyladenosine transferase [Vibrio cholerae O1 str. 2010EL-1786]
gi|379740317|ref|YP_005332286.1| KsgA/Dim1 family 16S ribosomal RNA methyltransferase [Vibrio
cholerae IEC224]
gi|384423746|ref|YP_005633104.1| Dimethyladenosine transferase [Vibrio cholerae LMA3984-4]
gi|417812429|ref|ZP_12459089.1| dimethyladenosine transferase [Vibrio cholerae HC-49A2]
gi|417815290|ref|ZP_12461924.1| dimethyladenosine transferase [Vibrio cholerae HCUF01]
gi|417819328|ref|ZP_12465945.1| dimethyladenosine transferase [Vibrio cholerae HE39]
gi|417823580|ref|ZP_12470172.1| dimethyladenosine transferase [Vibrio cholerae HE48]
gi|418331151|ref|ZP_12942101.1| dimethyladenosine transferase [Vibrio cholerae HC-06A1]
gi|418336309|ref|ZP_12945208.1| dimethyladenosine transferase [Vibrio cholerae HC-23A1]
gi|418342688|ref|ZP_12949489.1| dimethyladenosine transferase [Vibrio cholerae HC-28A1]
gi|418347853|ref|ZP_12952589.1| dimethyladenosine transferase [Vibrio cholerae HC-43A1]
gi|418354250|ref|ZP_12956974.1| dimethyladenosine transferase [Vibrio cholerae HC-61A1]
gi|419824915|ref|ZP_14348422.1| dimethyladenosine transferase [Vibrio cholerae CP1033(6)]
gi|419829020|ref|ZP_14352509.1| dimethyladenosine transferase [Vibrio cholerae HC-1A2]
gi|419831801|ref|ZP_14355268.1| dimethyladenosine transferase [Vibrio cholerae HC-61A2]
gi|419835391|ref|ZP_14358836.1| dimethyladenosine transferase [Vibrio cholerae HC-46B1]
gi|421315728|ref|ZP_15766300.1| dimethyladenosine transferase [Vibrio cholerae CP1032(5)]
gi|421319232|ref|ZP_15769791.1| dimethyladenosine transferase [Vibrio cholerae CP1038(11)]
gi|421323264|ref|ZP_15773793.1| dimethyladenosine transferase [Vibrio cholerae CP1041(14)]
gi|421327671|ref|ZP_15778187.1| dimethyladenosine transferase [Vibrio cholerae CP1042(15)]
gi|421330671|ref|ZP_15781153.1| dimethyladenosine transferase [Vibrio cholerae CP1046(19)]
gi|421334268|ref|ZP_15784738.1| dimethyladenosine transferase [Vibrio cholerae CP1048(21)]
gi|421338167|ref|ZP_15788606.1| dimethyladenosine transferase [Vibrio cholerae HC-20A2]
gi|421342008|ref|ZP_15792415.1| dimethyladenosine transferase [Vibrio cholerae HC-43B1]
gi|421345746|ref|ZP_15796131.1| dimethyladenosine transferase [Vibrio cholerae HC-46A1]
gi|421350305|ref|ZP_15800671.1| dimethyladenosine transferase [Vibrio cholerae HE-25]
gi|421353264|ref|ZP_15803598.1| dimethyladenosine transferase [Vibrio cholerae HE-45]
gi|422305872|ref|ZP_16393059.1| dimethyladenosine transferase [Vibrio cholerae CP1035(8)]
gi|422890483|ref|ZP_16932908.1| dimethyladenosine transferase [Vibrio cholerae HC-40A1]
gi|422901282|ref|ZP_16936660.1| dimethyladenosine transferase [Vibrio cholerae HC-48A1]
gi|422905466|ref|ZP_16940324.1| dimethyladenosine transferase [Vibrio cholerae HC-70A1]
gi|422912187|ref|ZP_16946717.1| dimethyladenosine transferase [Vibrio cholerae HFU-02]
gi|422916184|ref|ZP_16950525.1| dimethyladenosine transferase [Vibrio cholerae HC-02A1]
gi|422921697|ref|ZP_16954907.1| dimethyladenosine transferase [Vibrio cholerae BJG-01]
gi|422924666|ref|ZP_16957704.1| dimethyladenosine transferase [Vibrio cholerae HC-38A1]
gi|423143713|ref|ZP_17131331.1| dimethyladenosine transferase [Vibrio cholerae HC-19A1]
gi|423148697|ref|ZP_17136058.1| dimethyladenosine transferase [Vibrio cholerae HC-21A1]
gi|423152487|ref|ZP_17139689.1| dimethyladenosine transferase [Vibrio cholerae HC-22A1]
gi|423155271|ref|ZP_17142410.1| dimethyladenosine transferase [Vibrio cholerae HC-32A1]
gi|423159130|ref|ZP_17146104.1| dimethyladenosine transferase [Vibrio cholerae HC-33A2]
gi|423163808|ref|ZP_17150604.1| dimethyladenosine transferase [Vibrio cholerae HC-48B2]
gi|423729829|ref|ZP_17703150.1| dimethyladenosine transferase [Vibrio cholerae HC-17A1]
gi|423733752|ref|ZP_17706968.1| dimethyladenosine transferase [Vibrio cholerae HC-41B1]
gi|423747050|ref|ZP_17711337.1| dimethyladenosine transferase [Vibrio cholerae HC-50A2]
gi|423816142|ref|ZP_17715128.1| dimethyladenosine transferase [Vibrio cholerae HC-55C2]
gi|423848206|ref|ZP_17718915.1| dimethyladenosine transferase [Vibrio cholerae HC-59A1]
gi|423878784|ref|ZP_17722522.1| dimethyladenosine transferase [Vibrio cholerae HC-60A1]
gi|423891660|ref|ZP_17725352.1| dimethyladenosine transferase [Vibrio cholerae HC-62A1]
gi|423926435|ref|ZP_17729968.1| dimethyladenosine transferase [Vibrio cholerae HC-77A1]
gi|423946481|ref|ZP_17733389.1| dimethyladenosine transferase [Vibrio cholerae HE-40]
gi|423975640|ref|ZP_17736938.1| dimethyladenosine transferase [Vibrio cholerae HE-46]
gi|423996604|ref|ZP_17739870.1| dimethyladenosine transferase [Vibrio cholerae HC-02C1]
gi|424000990|ref|ZP_17744083.1| dimethyladenosine transferase [Vibrio cholerae HC-17A2]
gi|424005150|ref|ZP_17748138.1| dimethyladenosine transferase [Vibrio cholerae HC-37A1]
gi|424008037|ref|ZP_17750987.1| dimethyladenosine transferase [Vibrio cholerae HC-44C1]
gi|424015301|ref|ZP_17755151.1| dimethyladenosine transferase [Vibrio cholerae HC-55B2]
gi|424018415|ref|ZP_17758217.1| dimethyladenosine transferase [Vibrio cholerae HC-59B1]
gi|424022945|ref|ZP_17762612.1| dimethyladenosine transferase [Vibrio cholerae HC-62B1]
gi|424025963|ref|ZP_17765583.1| dimethyladenosine transferase [Vibrio cholerae HC-69A1]
gi|424585344|ref|ZP_18024940.1| dimethyladenosine transferase [Vibrio cholerae CP1030(3)]
gi|424589720|ref|ZP_18029167.1| dimethyladenosine transferase [Vibrio cholerae CP1037(10)]
gi|424593965|ref|ZP_18033308.1| dimethyladenosine transferase [Vibrio cholerae CP1040(13)]
gi|424597900|ref|ZP_18037102.1| dimethyladenosine transferase [Vibrio Cholerae CP1044(17)]
gi|424600665|ref|ZP_18039824.1| dimethyladenosine transferase [Vibrio cholerae CP1047(20)]
gi|424605580|ref|ZP_18044548.1| dimethyladenosine transferase [Vibrio cholerae CP1050(23)]
gi|424609297|ref|ZP_18048160.1| dimethyladenosine transferase [Vibrio cholerae HC-39A1]
gi|424612217|ref|ZP_18051028.1| dimethyladenosine transferase [Vibrio cholerae HC-41A1]
gi|424616093|ref|ZP_18054788.1| dimethyladenosine transferase [Vibrio cholerae HC-42A1]
gi|424620856|ref|ZP_18059387.1| dimethyladenosine transferase [Vibrio cholerae HC-47A1]
gi|424623788|ref|ZP_18062268.1| dimethyladenosine transferase [Vibrio cholerae HC-50A1]
gi|424628363|ref|ZP_18066672.1| dimethyladenosine transferase [Vibrio cholerae HC-51A1]
gi|424632318|ref|ZP_18070437.1| dimethyladenosine transferase [Vibrio cholerae HC-52A1]
gi|424635405|ref|ZP_18073429.1| dimethyladenosine transferase [Vibrio cholerae HC-55A1]
gi|424639197|ref|ZP_18077097.1| dimethyladenosine transferase [Vibrio cholerae HC-56A1]
gi|424643673|ref|ZP_18081431.1| dimethyladenosine transferase [Vibrio cholerae HC-56A2]
gi|424647480|ref|ZP_18085160.1| dimethyladenosine transferase [Vibrio cholerae HC-57A1]
gi|424651595|ref|ZP_18089123.1| dimethyladenosine transferase [Vibrio cholerae HC-57A2]
gi|424655542|ref|ZP_18092848.1| dimethyladenosine transferase [Vibrio cholerae HC-81A2]
gi|429886332|ref|ZP_19367892.1| Dimethyladenosine transferase [Vibrio cholerae PS15]
gi|440708648|ref|ZP_20889310.1| dimethyladenosine transferase [Vibrio cholerae 4260B]
gi|443502492|ref|ZP_21069485.1| dimethyladenosine transferase [Vibrio cholerae HC-64A1]
gi|443506399|ref|ZP_21073197.1| dimethyladenosine transferase [Vibrio cholerae HC-65A1]
gi|443510235|ref|ZP_21076907.1| dimethyladenosine transferase [Vibrio cholerae HC-67A1]
gi|443514071|ref|ZP_21080616.1| dimethyladenosine transferase [Vibrio cholerae HC-68A1]
gi|443517884|ref|ZP_21084307.1| dimethyladenosine transferase [Vibrio cholerae HC-71A1]
gi|443522466|ref|ZP_21088716.1| dimethyladenosine transferase [Vibrio cholerae HC-72A2]
gi|443526335|ref|ZP_21092420.1| dimethyladenosine transferase [Vibrio cholerae HC-78A1]
gi|443530371|ref|ZP_21096387.1| dimethyladenosine transferase [Vibrio cholerae HC-7A1]
gi|443534143|ref|ZP_21100063.1| dimethyladenosine transferase [Vibrio cholerae HC-80A1]
gi|443537725|ref|ZP_21103582.1| dimethyladenosine transferase [Vibrio cholerae HC-81A1]
gi|449054327|ref|ZP_21732995.1| Dimethyladenosine transferase [Vibrio cholerae O1 str. Inaba G4222]
gi|27151608|sp|Q9KUS2.2|RSMA_VIBCH RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226732637|sp|A5F8N2.1|RSMA_VIBC3 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|121546388|gb|EAX56639.1| dimethyladenosine transferase [Vibrio cholerae 2740-80]
gi|124113744|gb|EAY32564.1| dimethyladenosine transferase [Vibrio cholerae 1587]
gi|124120912|gb|EAY39655.1| dimethyladenosine transferase [Vibrio cholerae MZO-3]
gi|126509241|gb|EAZ71835.1| dimethyladenosine transferase [Vibrio cholerae NCTC 8457]
gi|146315012|gb|ABQ19551.1| dimethyladenosine transferase [Vibrio cholerae O395]
gi|229332060|gb|EEN97548.1| dimethyladenosine transferase [Vibrio cholerae 12129(1)]
gi|229338717|gb|EEO03734.1| dimethyladenosine transferase [Vibrio cholerae bv. albensis VL426]
gi|229342936|gb|EEO07925.1| dimethyladenosine transferase [Vibrio cholerae TM 11079-80]
gi|229344439|gb|EEO09414.1| dimethyladenosine transferase [Vibrio cholerae RC9]
gi|229350304|gb|EEO15255.1| dimethyladenosine transferase [Vibrio cholerae TMA 21]
gi|229354166|gb|EEO19097.1| dimethyladenosine transferase [Vibrio cholerae B33]
gi|229355827|gb|EEO20747.1| dimethyladenosine transferase [Vibrio cholerae BX 330286]
gi|229368917|gb|ACQ59340.1| dimethyladenosine transferase [Vibrio cholerae MJ-1236]
gi|254846379|gb|EET24793.1| dimethyladenosine transferase [Vibrio cholerae MO10]
gi|255738575|gb|EET93963.1| dimethyladenosine transferase [Vibrio cholera CIRS 101]
gi|262023929|gb|EEY42626.1| dimethyladenosine transferase [Vibrio cholerae RC27]
gi|262031384|gb|EEY49992.1| dimethyladenosine transferase [Vibrio cholerae INDRE 91/1]
gi|327483299|gb|AEA77706.1| Dimethyladenosine transferase [Vibrio cholerae LMA3984-4]
gi|340041184|gb|EGR02151.1| dimethyladenosine transferase [Vibrio cholerae HE39]
gi|340043276|gb|EGR04235.1| dimethyladenosine transferase [Vibrio cholerae HCUF01]
gi|340043809|gb|EGR04766.1| dimethyladenosine transferase [Vibrio cholerae HC-49A2]
gi|340048209|gb|EGR09131.1| dimethyladenosine transferase [Vibrio cholerae HE48]
gi|341625798|gb|EGS51225.1| dimethyladenosine transferase [Vibrio cholerae HC-70A1]
gi|341627170|gb|EGS52496.1| dimethyladenosine transferase [Vibrio cholerae HC-48A1]
gi|341627724|gb|EGS53024.1| dimethyladenosine transferase [Vibrio cholerae HC-40A1]
gi|341641017|gb|EGS65591.1| dimethyladenosine transferase [Vibrio cholerae HC-02A1]
gi|341641374|gb|EGS65930.1| dimethyladenosine transferase [Vibrio cholerae HFU-02]
gi|341648200|gb|EGS72265.1| dimethyladenosine transferase [Vibrio cholerae BJG-01]
gi|341648724|gb|EGS72765.1| dimethyladenosine transferase [Vibrio cholerae HC-38A1]
gi|356421641|gb|EHH75135.1| dimethyladenosine transferase [Vibrio cholerae HC-06A1]
gi|356422105|gb|EHH75589.1| dimethyladenosine transferase [Vibrio cholerae HC-21A1]
gi|356426912|gb|EHH80195.1| dimethyladenosine transferase [Vibrio cholerae HC-19A1]
gi|356433090|gb|EHH86283.1| dimethyladenosine transferase [Vibrio cholerae HC-23A1]
gi|356434859|gb|EHH88026.1| dimethyladenosine transferase [Vibrio cholerae HC-22A1]
gi|356438149|gb|EHH91200.1| dimethyladenosine transferase [Vibrio cholerae HC-28A1]
gi|356443533|gb|EHH96354.1| dimethyladenosine transferase [Vibrio cholerae HC-32A1]
gi|356447964|gb|EHI00749.1| dimethyladenosine transferase [Vibrio cholerae HC-43A1]
gi|356450579|gb|EHI03298.1| dimethyladenosine transferase [Vibrio cholerae HC-33A2]
gi|356454026|gb|EHI06681.1| dimethyladenosine transferase [Vibrio cholerae HC-61A1]
gi|356456533|gb|EHI09131.1| dimethyladenosine transferase [Vibrio cholerae HC-48B2]
gi|356648236|gb|AET28291.1| dimethyladenosine transferase [Vibrio cholerae O1 str. 2010EL-1786]
gi|378793827|gb|AFC57298.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Vibrio cholerae IEC224]
gi|395922469|gb|EJH33285.1| dimethyladenosine transferase [Vibrio cholerae CP1032(5)]
gi|395923109|gb|EJH33921.1| dimethyladenosine transferase [Vibrio cholerae CP1041(14)]
gi|395925557|gb|EJH36354.1| dimethyladenosine transferase [Vibrio cholerae CP1038(11)]
gi|395931405|gb|EJH42150.1| dimethyladenosine transferase [Vibrio cholerae CP1042(15)]
gi|395934524|gb|EJH45262.1| dimethyladenosine transferase [Vibrio cholerae CP1046(19)]
gi|395937798|gb|EJH48509.1| dimethyladenosine transferase [Vibrio cholerae CP1048(21)]
gi|395945511|gb|EJH56176.1| dimethyladenosine transferase [Vibrio cholerae HC-43B1]
gi|395946530|gb|EJH57193.1| dimethyladenosine transferase [Vibrio cholerae HC-20A2]
gi|395948415|gb|EJH59065.1| dimethyladenosine transferase [Vibrio cholerae HC-46A1]
gi|395954427|gb|EJH65037.1| dimethyladenosine transferase [Vibrio cholerae HE-25]
gi|395955037|gb|EJH65642.1| dimethyladenosine transferase [Vibrio cholerae HE-45]
gi|395964090|gb|EJH74332.1| dimethyladenosine transferase [Vibrio cholerae HC-56A2]
gi|395964147|gb|EJH74387.1| dimethyladenosine transferase [Vibrio cholerae HC-57A2]
gi|395967211|gb|EJH77311.1| dimethyladenosine transferase [Vibrio cholerae HC-42A1]
gi|395975775|gb|EJH85252.1| dimethyladenosine transferase [Vibrio cholerae HC-47A1]
gi|395977859|gb|EJH87255.1| dimethyladenosine transferase [Vibrio cholerae CP1030(3)]
gi|395979392|gb|EJH88744.1| dimethyladenosine transferase [Vibrio cholerae CP1047(20)]
gi|408010193|gb|EKG48065.1| dimethyladenosine transferase [Vibrio cholerae HC-39A1]
gi|408016358|gb|EKG53908.1| dimethyladenosine transferase [Vibrio cholerae HC-50A1]
gi|408017127|gb|EKG54647.1| dimethyladenosine transferase [Vibrio cholerae HC-41A1]
gi|408021444|gb|EKG58698.1| dimethyladenosine transferase [Vibrio cholerae HC-52A1]
gi|408027696|gb|EKG64654.1| dimethyladenosine transferase [Vibrio cholerae HC-56A1]
gi|408027720|gb|EKG64673.1| dimethyladenosine transferase [Vibrio cholerae HC-55A1]
gi|408036632|gb|EKG73054.1| dimethyladenosine transferase [Vibrio cholerae CP1037(10)]
gi|408037275|gb|EKG73674.1| dimethyladenosine transferase [Vibrio cholerae HC-57A1]
gi|408037607|gb|EKG73995.1| dimethyladenosine transferase [Vibrio cholerae CP1040(13)]
gi|408045036|gb|EKG80908.1| dimethyladenosine transferase [Vibrio Cholerae CP1044(17)]
gi|408046908|gb|EKG82571.1| dimethyladenosine transferase [Vibrio cholerae CP1050(23)]
gi|408057574|gb|EKG92417.1| dimethyladenosine transferase [Vibrio cholerae HC-81A2]
gi|408059344|gb|EKG94111.1| dimethyladenosine transferase [Vibrio cholerae HC-51A1]
gi|408611939|gb|EKK85295.1| dimethyladenosine transferase [Vibrio cholerae CP1033(6)]
gi|408622209|gb|EKK95197.1| dimethyladenosine transferase [Vibrio cholerae HC-1A2]
gi|408627728|gb|EKL00531.1| dimethyladenosine transferase [Vibrio cholerae HC-17A1]
gi|408627976|gb|EKL00760.1| dimethyladenosine transferase [Vibrio cholerae CP1035(8)]
gi|408631909|gb|EKL04425.1| dimethyladenosine transferase [Vibrio cholerae HC-41B1]
gi|408636813|gb|EKL08935.1| dimethyladenosine transferase [Vibrio cholerae HC-55C2]
gi|408642925|gb|EKL14668.1| dimethyladenosine transferase [Vibrio cholerae HC-50A2]
gi|408644229|gb|EKL15930.1| dimethyladenosine transferase [Vibrio cholerae HC-60A1]
gi|408645332|gb|EKL16988.1| dimethyladenosine transferase [Vibrio cholerae HC-59A1]
gi|408652208|gb|EKL23433.1| dimethyladenosine transferase [Vibrio cholerae HC-61A2]
gi|408659051|gb|EKL30107.1| dimethyladenosine transferase [Vibrio cholerae HC-77A1]
gi|408660088|gb|EKL31118.1| dimethyladenosine transferase [Vibrio cholerae HC-62A1]
gi|408662155|gb|EKL33127.1| dimethyladenosine transferase [Vibrio cholerae HE-40]
gi|408666268|gb|EKL37064.1| dimethyladenosine transferase [Vibrio cholerae HE-46]
gi|408849358|gb|EKL89380.1| dimethyladenosine transferase [Vibrio cholerae HC-37A1]
gi|408849853|gb|EKL89856.1| dimethyladenosine transferase [Vibrio cholerae HC-17A2]
gi|408854665|gb|EKL94415.1| dimethyladenosine transferase [Vibrio cholerae HC-02C1]
gi|408858804|gb|EKL98474.1| dimethyladenosine transferase [Vibrio cholerae HC-46B1]
gi|408862123|gb|EKM01665.1| dimethyladenosine transferase [Vibrio cholerae HC-55B2]
gi|408866324|gb|EKM05707.1| dimethyladenosine transferase [Vibrio cholerae HC-44C1]
gi|408870486|gb|EKM09764.1| dimethyladenosine transferase [Vibrio cholerae HC-59B1]
gi|408874558|gb|EKM13728.1| dimethyladenosine transferase [Vibrio cholerae HC-62B1]
gi|408881528|gb|EKM20409.1| dimethyladenosine transferase [Vibrio cholerae HC-69A1]
gi|429226849|gb|EKY32921.1| Dimethyladenosine transferase [Vibrio cholerae PS15]
gi|439975915|gb|ELP52017.1| dimethyladenosine transferase [Vibrio cholerae 4260B]
gi|443433192|gb|ELS75709.1| dimethyladenosine transferase [Vibrio cholerae HC-64A1]
gi|443437023|gb|ELS83132.1| dimethyladenosine transferase [Vibrio cholerae HC-65A1]
gi|443440809|gb|ELS90490.1| dimethyladenosine transferase [Vibrio cholerae HC-67A1]
gi|443444676|gb|ELS97944.1| dimethyladenosine transferase [Vibrio cholerae HC-68A1]
gi|443448514|gb|ELT05143.1| dimethyladenosine transferase [Vibrio cholerae HC-71A1]
gi|443451535|gb|ELT11789.1| dimethyladenosine transferase [Vibrio cholerae HC-72A2]
gi|443455328|gb|ELT19110.1| dimethyladenosine transferase [Vibrio cholerae HC-78A1]
gi|443458572|gb|ELT25967.1| dimethyladenosine transferase [Vibrio cholerae HC-7A1]
gi|443462724|gb|ELT33755.1| dimethyladenosine transferase [Vibrio cholerae HC-80A1]
gi|443466550|gb|ELT41207.1| dimethyladenosine transferase [Vibrio cholerae HC-81A1]
gi|448266120|gb|EMB03350.1| Dimethyladenosine transferase [Vibrio cholerae O1 str. Inaba G4222]
Length = 271
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 57/122 (46%), Gaps = 18/122 (14%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G + RL++M Q +C V +P AF+P P+VD VV P HP L
Sbjct: 147 LAAGPGTKAYGRLTVMAQYYCKVVPVLEVPPSAFVPPPKVDSAVVRLVPYEDLPHPATSL 206
Query: 58 PFKLIERVVSCIFRYRQKQV---YKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQ 114
+ ++RVV F R+K V YK L P+ LE + P +RP L++
Sbjct: 207 EW--LDRVVREGFNQRRKTVRNCYK--GLAEPE--------TLETLGINPGMRPENLTLA 254
Query: 115 EF 116
+F
Sbjct: 255 QF 256
>gi|417842420|ref|ZP_12488505.1| Ribosomal RNA small subunit methyltransferase A [Haemophilus
haemolyticus M21127]
gi|341951632|gb|EGT78194.1| Ribosomal RNA small subunit methyltransferase A [Haemophilus
haemolyticus M21127]
Length = 288
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Query: 12 RLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDLPFKLIERVVSC 68
RL+IM Q +C V +P AF P P+VD VV P HP+ DL + + RV S
Sbjct: 164 RLTIMAQYFCQVMPVLEVPPSAFKPAPKVDSAVVRLIPHKELPHPVKDLYW--LNRVCSQ 221
Query: 69 IFRYRQKQVYKPASLLF-PKRKRQLVVSLLERA 100
F R+K + S LF P+ L + L RA
Sbjct: 222 AFNQRRKTLRNALSTLFSPENLTALGIDLNARA 254
>gi|262189700|ref|ZP_06048068.1| dimethyladenosine transferase [Vibrio cholerae CT 5369-93]
gi|262034420|gb|EEY52792.1| dimethyladenosine transferase [Vibrio cholerae CT 5369-93]
Length = 271
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 57/122 (46%), Gaps = 18/122 (14%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G + RL++M Q +C V +P AF+P P+VD VV P HP L
Sbjct: 147 LAAGPGTKAYGRLTVMAQYYCKVVPVLEVPPSAFVPPPKVDSAVVRLVPYEDLPHPATSL 206
Query: 58 PFKLIERVVSCIFRYRQKQV---YKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQ 114
+ ++RVV F R+K V YK L P+ LE + P +RP L++
Sbjct: 207 EW--LDRVVREGFNQRRKTVRNCYK--GLAEPE--------TLETLGINPGMRPENLTLA 254
Query: 115 EF 116
+F
Sbjct: 255 QF 256
>gi|16272493|ref|NP_438707.1| dimethyladenosine transferase [Haemophilus influenzae Rd KW20]
gi|145628930|ref|ZP_01784730.1| dimethyladenosine transferase [Haemophilus influenzae 22.1-21]
gi|260580996|ref|ZP_05848819.1| dimethyladenosine transferase [Haemophilus influenzae RdAW]
gi|1170712|sp|P44749.1|RSMA_HAEIN RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|1573534|gb|AAC22207.1| dimethyladenosine transferase (ksgA) [Haemophilus influenzae Rd
KW20]
gi|144979400|gb|EDJ89086.1| dimethyladenosine transferase [Haemophilus influenzae 22.1-21]
gi|260092355|gb|EEW76295.1| dimethyladenosine transferase [Haemophilus influenzae RdAW]
Length = 287
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Query: 12 RLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDLPFKLIERVVSC 68
RL+IM Q +C V +P AF P P+VD VV P HP+ DL + + RV S
Sbjct: 164 RLTIMAQYFCQVMPVLEVPPSAFKPAPKVDSAVVRLIPHKELPHPVKDLYW--LNRVCSQ 221
Query: 69 IFRYRQKQVYKPASLLF-PKRKRQLVVSLLERA 100
F R+K + S LF P+ L + L RA
Sbjct: 222 AFNQRRKTLRNALSTLFSPENLTALGIDLNARA 254
>gi|114319429|ref|YP_741112.1| dimethyladenosine transferase [Alkalilimnicola ehrlichii MLHE-1]
gi|114225823|gb|ABI55622.1| dimethyladenosine transferase [Alkalilimnicola ehrlichii MLHE-1]
Length = 274
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 12/136 (8%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF- 59
+ A G + RLS+M Q C V + F +P AF P P+VD V P P +D+
Sbjct: 146 LAAPPGSKTYGRLSVMVQYRCAVTNLFRLPPGAFRPPPKVDSAFVRLVPHAEPTVDVGDE 205
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
+ R+V+ F R+K + + L P ++ + + P R LS+++F +
Sbjct: 206 QAFARLVTQAFSQRRKTLR---NTLRPLMSADTIIGV----GIDPRERAENLSLEQFAAL 258
Query: 120 CLAY----RDMCEEMP 131
A+ R+ + P
Sbjct: 259 SQAHTRTKRNASRDTP 274
>gi|414161795|ref|ZP_11418047.1| ribosomal RNA small subunit methyltransferase A [Staphylococcus
simulans ACS-120-V-Sch1]
gi|410875306|gb|EKS23229.1| ribosomal RNA small subunit methyltransferase A [Staphylococcus
simulans ACS-120-V-Sch1]
Length = 296
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 11/133 (8%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPII-----DL 57
A G + LSI+ Q + T+P F+P P VD VV R PI+ D
Sbjct: 165 AAVGTKAYGSLSIVAQYYTETSKVLTVPKTVFMPPPNVDSIVVKLMKRTEPIVSVDDEDR 224
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLF--PKRKRQLVVSLLERACVKPILRPYQLSVQE 115
FK+ + F R+K + LF K+ + + + L+ + + P R LS++E
Sbjct: 225 FFKMTK----AAFSQRRKTIANNYQSLFFDGKKLKDKIKTWLDESGIDPRRRGETLSIKE 280
Query: 116 FGQICLAYRDMCE 128
F + ++ E
Sbjct: 281 FANLYTNLKNFPE 293
>gi|319897933|ref|YP_004136130.1| s-adenosylmethionine-6-n',n'-adenosyl (rRNA) dimethyltransferase
[Haemophilus influenzae F3031]
gi|317433439|emb|CBY81821.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Haemophilus influenzae F3031]
Length = 287
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Query: 12 RLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDLPFKLIERVVSC 68
RL+IM Q +C V +P AF P P+VD VV P HP+ DL + + RV S
Sbjct: 164 RLTIMAQYFCQVMPVLEVPPSAFKPAPKVDSAVVRLIPHKELPHPVKDLYW--LNRVCSQ 221
Query: 69 IFRYRQKQVYKPASLLF-PKRKRQLVVSLLERA 100
F R+K + S LF P+ L + L RA
Sbjct: 222 AFNQRRKTLRNALSTLFSPENLTALGIDLNARA 254
>gi|222153745|ref|YP_002562922.1| dimethyladenosine transferase [Streptococcus uberis 0140J]
gi|254807888|sp|B9DVT4.1|RSMA_STRU0 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|222114558|emb|CAR43508.1| dimethyladenosine transferase [Streptococcus uberis 0140J]
Length = 290
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 58/117 (49%), Gaps = 3/117 (2%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ R P+I++ + RV F
Sbjct: 172 LSIAVQYYMTAKVAFIVPKTVFVPAPNVDSAILKMVRRPEPLIEVTDEDFFFRVAKVGFI 231
Query: 72 YRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEFGQICLAYRDM 126
+R+K ++ + F K + + + LE A +KP +R L++ ++G++ A +++
Sbjct: 232 HRRKTLWNNLTSHFGKTEEIKTKLTQALELADIKPSIRGEALTIPQYGKLADALKEV 288
>gi|163938049|ref|YP_001642933.1| dimethyladenosine transferase [Bacillus weihenstephanensis KBAB4]
gi|423370770|ref|ZP_17348174.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD142]
gi|423456672|ref|ZP_17433522.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG5X1-1]
gi|423471689|ref|ZP_17448433.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG6O-2]
gi|423490656|ref|ZP_17467338.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BtB2-4]
gi|423496396|ref|ZP_17473040.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
CER057]
gi|423496810|ref|ZP_17473427.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
CER074]
gi|423520181|ref|ZP_17496662.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
HuA2-4]
gi|423520654|ref|ZP_17497127.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
HuA4-10]
gi|423556962|ref|ZP_17533265.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
MC67]
gi|423595318|ref|ZP_17571348.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD048]
gi|423597235|ref|ZP_17573235.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD078]
gi|423659640|ref|ZP_17634809.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VDM022]
gi|423671072|ref|ZP_17646101.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VDM034]
gi|423672705|ref|ZP_17647644.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VDM062]
gi|226729756|sp|A9VN54.1|RSMA_BACWK RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|163860246|gb|ABY41305.1| dimethyladenosine transferase [Bacillus weihenstephanensis KBAB4]
gi|401073357|gb|EJP81782.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD142]
gi|401128419|gb|EJQ36109.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG5X1-1]
gi|401149126|gb|EJQ56605.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
CER057]
gi|401155446|gb|EJQ62856.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
HuA2-4]
gi|401163991|gb|EJQ71331.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
CER074]
gi|401180550|gb|EJQ87708.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
HuA4-10]
gi|401194041|gb|EJR01038.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
MC67]
gi|401222244|gb|EJR28841.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD048]
gi|401239576|gb|EJR46001.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD078]
gi|401293903|gb|EJR99536.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VDM034]
gi|401304659|gb|EJS10209.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VDM022]
gi|401311437|gb|EJS16738.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VDM062]
gi|402429001|gb|EJV61092.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BtB2-4]
gi|402430787|gb|EJV62861.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG6O-2]
Length = 292
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 5/126 (3%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G ++ LSI Q + V+ T+P F+P+P VD ++ R P++++ +
Sbjct: 161 LAAKPGTKEYGSLSIAIQYYTEVETVMTVPRTVFVPQPNVDSAIIRLLKRPKPVVEVTDE 220
Query: 61 -LIERVVSCIFRYRQKQVYKPASLL---FPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
VV F R+K + S FPK K +L+ +L + P R LS++EF
Sbjct: 221 TFFFEVVRASFAQRRKTLMNNLSNNLNGFPKDK-ELLDRILTEVGIDPKRRGETLSIEEF 279
Query: 117 GQICLA 122
+ A
Sbjct: 280 ATLSNA 285
>gi|148825174|ref|YP_001289927.1| dimethyladenosine transferase [Haemophilus influenzae PittEE]
gi|148827743|ref|YP_001292496.1| dimethyladenosine transferase [Haemophilus influenzae PittGG]
gi|229845712|ref|ZP_04465834.1| dimethyladenosine transferase [Haemophilus influenzae 6P18H1]
gi|229846634|ref|ZP_04466742.1| dimethyladenosine transferase [Haemophilus influenzae 7P49H1]
gi|386265062|ref|YP_005828554.1| S-adenosylmethionine-6-N,N-adenosyl (rRNA) dimethyltransferase
[Haemophilus influenzae R2846]
gi|166221669|sp|A5U9U3.1|RSMA_HAEIE RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|166221670|sp|A5UH57.1|RSMA_HAEIG RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|148715334|gb|ABQ97544.1| dimethyladenosine transferase [Haemophilus influenzae PittEE]
gi|148718985|gb|ABR00113.1| dimethyladenosine transferase [Haemophilus influenzae PittGG]
gi|229810727|gb|EEP46445.1| dimethyladenosine transferase [Haemophilus influenzae 7P49H1]
gi|229811354|gb|EEP47061.1| dimethyladenosine transferase [Haemophilus influenzae 6P18H1]
gi|309972298|gb|ADO95499.1| S-adenosylmethionine-6-N,N-adenosyl (rRNA) dimethyltransferase
[Haemophilus influenzae R2846]
Length = 287
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Query: 12 RLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDLPFKLIERVVSC 68
RL+IM Q +C V +P AF P P+VD VV P HP+ DL + + RV S
Sbjct: 164 RLTIMAQYFCQVMPVLEVPPSAFKPAPKVDSAVVRLIPHKELPHPVKDLYW--LNRVCSQ 221
Query: 69 IFRYRQKQVYKPASLLF-PKRKRQLVVSLLERA 100
F R+K + S LF P+ L + L RA
Sbjct: 222 AFNQRRKTLRNALSTLFSPENLTALGIDLNARA 254
>gi|423399550|ref|ZP_17376746.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG2X1-1]
gi|423410242|ref|ZP_17387389.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG2X1-3]
gi|401643606|gb|EJS61302.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG2X1-1]
gi|401649051|gb|EJS66641.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG2X1-3]
Length = 292
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 5/126 (3%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G ++ LSI Q + V+ T+P F+P+P VD ++ R P++++ +
Sbjct: 161 LAAKPGTKEYGSLSIAIQYYTEVETVMTVPRTVFVPQPNVDSAIIRLLKRPKPVVEVTDE 220
Query: 61 -LIERVVSCIFRYRQKQVYKPASLL---FPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
VV F R+K + S FPK K +L+ +L + P R LS++EF
Sbjct: 221 TFFFEVVRASFAQRRKTLMNNLSNNLNGFPKDK-ELLDRILTEVGIDPKRRGETLSIEEF 279
Query: 117 GQICLA 122
+ A
Sbjct: 280 ATLSNA 285
>gi|423485293|ref|ZP_17461980.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG6X1-2]
gi|401135870|gb|EJQ43466.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG6X1-2]
Length = 292
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 5/126 (3%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G ++ LSI Q + V+ T+P F+P+P VD ++ R P++++ +
Sbjct: 161 LAAKPGTKEYGSLSIAIQYYTEVETVMTVPRTVFVPQPNVDSAIIRLLKRPKPVVEVTDE 220
Query: 61 -LIERVVSCIFRYRQKQVYKPASLL---FPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
VV F R+K + S FPK K +L+ +L + P R LS++EF
Sbjct: 221 TFFFEVVRASFAQRRKTLMNNLSNNLNGFPKDK-ELLDRILTEVGIDPKRRGETLSIEEF 279
Query: 117 GQICLA 122
+ A
Sbjct: 280 ATLSNA 285
>gi|144897574|emb|CAM74438.1| Ribosomal RNA adenine methylase transferase [Magnetospirillum
gryphiswaldense MSR-1]
Length = 279
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 6/105 (5%)
Query: 12 RLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFKLIERVVSCIFR 71
RLS++ Q C+V F + +AF P P V VV PR P+ + +E+V + F
Sbjct: 166 RLSVITQWLCDVRPLFNVDKRAFTPPPNVMSTVVQLIPRSQPLAPARMETLEKVTAAAFG 225
Query: 72 YRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
R+K + L P V +L + R +L+V +F
Sbjct: 226 QRRKMLRSSLKSLGP------VEDMLAATGIAGTARAEELTVSQF 264
>gi|229182436|ref|ZP_04309688.1| Dimethyladenosine transferase [Bacillus cereus BGSC 6E1]
gi|228601016|gb|EEK58584.1| Dimethyladenosine transferase [Bacillus cereus BGSC 6E1]
Length = 220
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 5/126 (3%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G ++ LSI Q + V+ T+P F+P+P VD ++ R P++++ +
Sbjct: 89 LAAKPGTKEYGSLSIAIQYYTEVETVMTVPRTVFVPQPNVDSAIIRLLKRPKPVVEVTDE 148
Query: 61 L-IERVVSCIFRYRQKQVYKPASLL---FPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+ VV F R+K + S FPK K +L+ +L + P R LS++EF
Sbjct: 149 IFFFEVVRASFAQRRKTLMNNLSNNLNGFPKDK-ELLDRILTEVGIDPKRRGETLSIEEF 207
Query: 117 GQICLA 122
+ A
Sbjct: 208 ATLSNA 213
>gi|423399639|ref|ZP_17376812.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG2X1-2]
gi|423461696|ref|ZP_17438492.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG5X2-1]
gi|423480183|ref|ZP_17456895.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG6X1-1]
gi|401135358|gb|EJQ42957.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG5X2-1]
gi|401658245|gb|EJS75742.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG2X1-2]
gi|402423686|gb|EJV55892.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG6X1-1]
Length = 292
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 5/126 (3%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G ++ LSI Q + V+ T+P F+P+P VD ++ R P++++ +
Sbjct: 161 LAAKPGTKEYGSLSIAIQYYTEVETVMTVPRTVFVPQPNVDSAIIRLLKRPKPVVEVTDE 220
Query: 61 -LIERVVSCIFRYRQKQVYKPASLL---FPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
VV F R+K + S FPK K +L+ +L + P R LS++EF
Sbjct: 221 TFFFEVVRASFAQRRKTLMNNLSNNLNGFPKDK-ELLDRILTEVGIDPKRRGETLSIEEF 279
Query: 117 GQICLA 122
+ A
Sbjct: 280 ATLSNA 285
>gi|262164104|ref|ZP_06031843.1| dimethyladenosine transferase [Vibrio mimicus VM223]
gi|262027632|gb|EEY46298.1| dimethyladenosine transferase [Vibrio mimicus VM223]
Length = 232
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 58/122 (47%), Gaps = 18/122 (14%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G + RL++M Q +C V +P AF+P P+VD VV P HP L
Sbjct: 107 LAAGPGSKAYGRLTVMAQYYCKVVPVLEVPPTAFVPPPKVDSAVVRLVPYEDLPHPATSL 166
Query: 58 PFKLIERVVSCIFRYRQKQV---YKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQ 114
+ ++RVV F R+K V YK L+ P+ LE + P +RP L++
Sbjct: 167 EW--LDRVVREGFNQRRKTVRNCYK--GLVEPE--------TLEALGINPGMRPENLTLA 214
Query: 115 EF 116
+F
Sbjct: 215 QF 216
>gi|258623405|ref|ZP_05718409.1| dimethyladenosine transferase [Vibrio mimicus VM573]
gi|262172456|ref|ZP_06040134.1| dimethyladenosine transferase [Vibrio mimicus MB-451]
gi|449146482|ref|ZP_21777255.1| dimethyladenosine transferase [Vibrio mimicus CAIM 602]
gi|258584371|gb|EEW09116.1| dimethyladenosine transferase [Vibrio mimicus VM573]
gi|261893532|gb|EEY39518.1| dimethyladenosine transferase [Vibrio mimicus MB-451]
gi|449077714|gb|EMB48675.1| dimethyladenosine transferase [Vibrio mimicus CAIM 602]
Length = 272
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 58/122 (47%), Gaps = 18/122 (14%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G + RL++M Q +C V +P AF+P P+VD VV P HP L
Sbjct: 147 LAAGPGSKAYGRLTVMAQYYCKVVPVLEVPPTAFVPPPKVDSAVVRLVPYEDLPHPATSL 206
Query: 58 PFKLIERVVSCIFRYRQKQV---YKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQ 114
+ ++RVV F R+K V YK L+ P+ LE + P +RP L++
Sbjct: 207 EW--LDRVVREGFNQRRKTVRNCYK--GLVEPE--------TLEALGINPGMRPENLTLA 254
Query: 115 EF 116
+F
Sbjct: 255 QF 256
>gi|87119768|ref|ZP_01075665.1| rRNA (adenine-N6,N6)-dimethyltransferase [Marinomonas sp. MED121]
gi|86165244|gb|EAQ66512.1| rRNA (adenine-N6,N6)-dimethyltransferase [Marinomonas sp. MED121]
Length = 270
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 8/121 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPF 59
+ A G RLS+M Q +C V+ F + ++F P P+VD +V TP + P +
Sbjct: 144 LAARPGDNLYGRLSVMAQYYCQVESLFVVGPESFDPAPKVDSAIVRMTPYQEKPYLADSL 203
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
+ +ER V F+ R+K L K L + + P LRP +L V +F +I
Sbjct: 204 ETLERAVRLGFQQRRKT-------LRNNYKGILNNDDFDALDIDPGLRPERLDVPDFVKI 256
Query: 120 C 120
Sbjct: 257 A 257
>gi|15640470|ref|NP_230097.1| dimethyladenosine transferase [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121729955|ref|ZP_01682375.1| dimethyladenosine transferase [Vibrio cholerae V52]
gi|153830829|ref|ZP_01983496.1| dimethyladenosine transferase [Vibrio cholerae 623-39]
gi|227080654|ref|YP_002809205.1| dimethyladenosine transferase [Vibrio cholerae M66-2]
gi|227116847|ref|YP_002818743.1| dimethyladenosine transferase [Vibrio cholerae O395]
gi|254292213|ref|ZP_04962980.1| dimethyladenosine transferase [Vibrio cholerae AM-19226]
gi|297580583|ref|ZP_06942509.1| dimethyladenosine transferase [Vibrio cholerae RC385]
gi|298501025|ref|ZP_07010826.1| dimethyladenosine transferase [Vibrio cholerae MAK 757]
gi|9654867|gb|AAF93616.1| dimethyladenosine transferase [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121628295|gb|EAX60805.1| dimethyladenosine transferase [Vibrio cholerae V52]
gi|148873688|gb|EDL71823.1| dimethyladenosine transferase [Vibrio cholerae 623-39]
gi|150421870|gb|EDN13850.1| dimethyladenosine transferase [Vibrio cholerae AM-19226]
gi|227008542|gb|ACP04754.1| dimethyladenosine transferase [Vibrio cholerae M66-2]
gi|227012297|gb|ACP08507.1| dimethyladenosine transferase [Vibrio cholerae O395]
gi|297534999|gb|EFH73834.1| dimethyladenosine transferase [Vibrio cholerae RC385]
gi|297540273|gb|EFH76333.1| dimethyladenosine transferase [Vibrio cholerae MAK 757]
Length = 282
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 57/122 (46%), Gaps = 18/122 (14%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G + RL++M Q +C V +P AF+P P+VD VV P HP L
Sbjct: 158 LAAGPGTKAYGRLTVMAQYYCKVVPVLEVPPSAFVPPPKVDSAVVRLVPYEDLPHPATSL 217
Query: 58 PFKLIERVVSCIFRYRQKQV---YKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQ 114
+ ++RVV F R+K V YK L P+ LE + P +RP L++
Sbjct: 218 EW--LDRVVREGFNQRRKTVRNCYK--GLAEPE--------TLETLGINPGMRPENLTLA 265
Query: 115 EF 116
+F
Sbjct: 266 QF 267
>gi|380509563|ref|ZP_09852970.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Xanthomonas sacchari NCPPB 4393]
Length = 264
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 53/121 (43%), Gaps = 8/121 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPF- 59
M A G + RLS+M Q +C V F +P AF P P+VD VV PR + +
Sbjct: 146 MAADPGSKVYGRLSVMLQAYCEVTSLFVVPPGAFRPPPKVDSAVVRLVPRPPQTVGIADP 205
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
K VV F R+K + + + + E A V+P R QL V +F ++
Sbjct: 206 KRFADVVRAAFGQRRKTLRNALNGVCDAAQ-------FEAAGVRPDARAEQLEVADFVRL 258
Query: 120 C 120
Sbjct: 259 A 259
>gi|255015789|ref|ZP_05287915.1| dimethyladenosine transferase [Bacteroides sp. 2_1_7]
gi|256841738|ref|ZP_05547244.1| dimethyladenosine transferase [Parabacteroides sp. D13]
gi|262384068|ref|ZP_06077204.1| dimethyladenosine transferase [Bacteroides sp. 2_1_33B]
gi|298377078|ref|ZP_06987032.1| dimethyladenosine transferase [Bacteroides sp. 3_1_19]
gi|410104752|ref|ZP_11299664.1| ribosomal RNA small subunit methyltransferase A [Parabacteroides
sp. D25]
gi|423334503|ref|ZP_17312282.1| ribosomal RNA small subunit methyltransferase A [Parabacteroides
distasonis CL03T12C09]
gi|256736632|gb|EEU49960.1| dimethyladenosine transferase [Parabacteroides sp. D13]
gi|262294966|gb|EEY82898.1| dimethyladenosine transferase [Bacteroides sp. 2_1_33B]
gi|298266062|gb|EFI07721.1| dimethyladenosine transferase [Bacteroides sp. 3_1_19]
gi|409225694|gb|EKN18612.1| ribosomal RNA small subunit methyltransferase A [Parabacteroides
distasonis CL03T12C09]
gi|409233764|gb|EKN26598.1| ribosomal RNA small subunit methyltransferase A [Parabacteroides
sp. D25]
Length = 266
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 7/132 (5%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G + LS++ Q W +V++ FT+ K F P P+V V+ T + K
Sbjct: 139 LAAGPGSKTYGILSVLLQAWYDVEYLFTVSEKVFDPPPKVKSAVLKMTRNDRKELGCDEK 198
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
L + VV F R+K + L K + + ++ RP QLSV++F ++
Sbjct: 199 LFKTVVKTSFNQRRKTLRNSMKPLLGKDCPDYALPIFDK-------RPEQLSVEQFVELT 251
Query: 121 LAYRDMCEEMPG 132
L + E+ G
Sbjct: 252 LISQKHLEKQAG 263
>gi|16125931|ref|NP_420495.1| dimethyladenosine transferase [Caulobacter crescentus CB15]
gi|27151598|sp|Q9A7N5.1|RSMA_CAUCR RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|13423097|gb|AAK23663.1| dimethyladenosine transferase [Caulobacter crescentus CB15]
Length = 258
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 48/116 (41%), Gaps = 7/116 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A G + RL+++ Q C +P KAF P P+V VV P+ P
Sbjct: 137 IVAQPGDDAYGRLAVIAQTLCEARTVMDLPAKAFTPPPKVASAVVRLVPKAEPPPAEVVA 196
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+ERV + F R+K +L K L ERA V P R + + F
Sbjct: 197 ALERVTAAAFGQRRK-------MLRSSLKALGGADLCERAGVSPDARAEVIDLAGF 245
>gi|406659843|ref|ZP_11067981.1| dimethyladenosine transferase [Streptococcus iniae 9117]
gi|405577952|gb|EKB52100.1| dimethyladenosine transferase [Streptococcus iniae 9117]
Length = 290
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 57/119 (47%), Gaps = 11/119 (9%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPII-----DLPFKLIERVVS 67
LSI Q + F +P F+P P VD ++ R P++ D F R+
Sbjct: 172 LSIAVQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRPEPLVRVQDEDFFF----RLAK 227
Query: 68 CIFRYRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEFGQICLAYR 124
F +R+K ++ + F K + + + LE A +KP +R L+++++G++ A++
Sbjct: 228 VGFVHRRKTLWNNLTSHFGKTDEIKAKLEAGLENAAIKPSIRGEALTIEDYGRLADAFK 286
>gi|423583691|ref|ZP_17559802.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD014]
gi|423633628|ref|ZP_17609281.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD156]
gi|401208323|gb|EJR15090.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD014]
gi|401283338|gb|EJR89233.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD156]
Length = 292
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 5/126 (3%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G ++ LSI Q + V+ T+P F+P+P VD ++ R P++++ +
Sbjct: 161 LAAKPGTKEYGSLSIAIQYYTEVETVMTVPRTVFVPQPNVDSAIIRLLKRPKPVVEVKDE 220
Query: 61 -LIERVVSCIFRYRQKQVYKPASLL---FPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
VV F R+K + S FPK K +L+ +L + P R LS++EF
Sbjct: 221 TFFFEVVRASFAQRRKTLMNNLSNNLNGFPKDK-ELLDRILTEVGIDPKRRGETLSIEEF 279
Query: 117 GQICLA 122
+ A
Sbjct: 280 ATLSNA 285
>gi|258627053|ref|ZP_05721851.1| dimethyladenosine transferase [Vibrio mimicus VM603]
gi|258580727|gb|EEW05678.1| dimethyladenosine transferase [Vibrio mimicus VM603]
Length = 272
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 58/122 (47%), Gaps = 18/122 (14%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G + RL++M Q +C V +P AF+P P+VD VV P HP L
Sbjct: 147 LAAGPGSKAYGRLTVMAQYYCKVVPVLEVPPTAFVPPPKVDSAVVRLVPYEDLPHPATSL 206
Query: 58 PFKLIERVVSCIFRYRQKQV---YKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQ 114
+ ++RVV F R+K V YK L+ P+ LE + P +RP L++
Sbjct: 207 EW--LDRVVREGFNQRRKTVRNCYK--GLVEPE--------TLEALGINPGMRPENLTLA 254
Query: 115 EF 116
+F
Sbjct: 255 QF 256
>gi|422885092|ref|ZP_16931540.1| dimethyladenosine transferase [Streptococcus sanguinis SK49]
gi|332358479|gb|EGJ36304.1| dimethyladenosine transferase [Streptococcus sanguinis SK49]
Length = 290
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 3/115 (2%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDL-PFKLIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ R P ++ K +V F
Sbjct: 172 LSIAVQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRREQPAAEVQDEKFFFKVSKASFV 231
Query: 72 YRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEFGQICLAYR 124
+R+K ++ + F K + + + + LERA + P +R LS++EF ++ A +
Sbjct: 232 HRRKTLWNNLTSCFGKSEETKGKLTAALERADLSPSVRGEALSLEEFARLADALK 286
>gi|118588149|ref|ZP_01545559.1| dimethyladenosine transferase [Stappia aggregata IAM 12614]
gi|118439771|gb|EAV46402.1| dimethyladenosine transferase [Stappia aggregata IAM 12614]
Length = 274
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 56/124 (45%), Gaps = 10/124 (8%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLP--FK 60
A+ G + RL+++ C F I KAF P P+V VVH P P LP K
Sbjct: 154 ASPGSKAYGRLAVLAGWRCKGGILFDISPKAFTPPPKVTSAVVHLEPNASP---LPCDLK 210
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
+E++ + F R+K + ASL K L+ +A +KP R ++ + F +
Sbjct: 211 ALEKITAAAFGQRRKMLR--ASL---KSLSADAEELVTKAGLKPTARAEEIDIAGFVDLA 265
Query: 121 LAYR 124
+R
Sbjct: 266 NTFR 269
>gi|336392333|ref|ZP_08573732.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Lactobacillus coryniformis subsp. torquens KCTC 3535]
Length = 296
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 3/125 (2%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVH-PIIDLPF 59
+ A G + LS+ Q V F +P F+P+P VD +V T V P +
Sbjct: 165 LAADPGSKAYGSLSVAVQYQMTVKLAFIVPKTVFVPQPNVDSAIVSLTRHVTPPAVATDE 224
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPK--RKRQLVVSLLERACVKPILRPYQLSVQEFG 117
K+ R+V F R+K ++ + L+ K + + +L + P +R +LSV +F
Sbjct: 225 KVFARLVRGSFAQRRKSLWNNLTALYGKDSATKAALTEVLAAEKIDPGIRGERLSVTDFV 284
Query: 118 QICLA 122
++ A
Sbjct: 285 RLANA 289
>gi|312109189|ref|YP_003987505.1| dimethyladenosine transferase [Geobacillus sp. Y4.1MC1]
gi|423718306|ref|ZP_17692488.1| 16S ribosomal RNA methyltransferase, KsgA/Dim1 family [Geobacillus
thermoglucosidans TNO-09.020]
gi|311214290|gb|ADP72894.1| dimethyladenosine transferase [Geobacillus sp. Y4.1MC1]
gi|383365242|gb|EID42541.1| 16S ribosomal RNA methyltransferase, KsgA/Dim1 family [Geobacillus
thermoglucosidans TNO-09.020]
Length = 295
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 60/129 (46%), Gaps = 4/129 (3%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-L 61
A G + LSI Q + + T+P FIP+P VD V+ R P +D+ +
Sbjct: 166 AQPGTKDYGSLSIAIQYYTEAEKIMTVPRTVFIPQPNVDSAVIRLIKRKQPPVDVDDESF 225
Query: 62 IERVVSCIFRYRQKQVYKP--ASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
+VV F R+K + ++L K +++ + +L + P R L+++EF +
Sbjct: 226 FFQVVRASFAQRRKTILNNLISNLPNGKARKEKIERILTENGIDPRRRGETLTMEEFAAL 285
Query: 120 CLAYRD-MC 127
A R+ MC
Sbjct: 286 SNALREVMC 294
>gi|301310976|ref|ZP_07216905.1| dimethyladenosine transferase [Bacteroides sp. 20_3]
gi|423339161|ref|ZP_17316902.1| ribosomal RNA small subunit methyltransferase A [Parabacteroides
distasonis CL09T03C24]
gi|300831039|gb|EFK61680.1| dimethyladenosine transferase [Bacteroides sp. 20_3]
gi|409231063|gb|EKN23920.1| ribosomal RNA small subunit methyltransferase A [Parabacteroides
distasonis CL09T03C24]
Length = 266
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 7/132 (5%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G + LS++ Q W +V++ FT+ K F P P+V V+ T + K
Sbjct: 139 LAAGPGSKTYGILSVLLQAWYDVEYLFTVSEKVFDPPPKVKSAVLKITRNDRKELGCDEK 198
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
L + VV F R+K + L K + + ++ RP QLSV++F ++
Sbjct: 199 LFKTVVKTSFNQRRKTLRNSMKPLLGKDCPDYALPIFDK-------RPEQLSVEQFVELT 251
Query: 121 LAYRDMCEEMPG 132
L + E+ G
Sbjct: 252 LISQKHLEKQAG 263
>gi|336233583|ref|YP_004586199.1| ribosomal RNA small subunit methyltransferase A [Geobacillus
thermoglucosidasius C56-YS93]
gi|335360438|gb|AEH46118.1| Ribosomal RNA small subunit methyltransferase A [Geobacillus
thermoglucosidasius C56-YS93]
Length = 295
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 60/129 (46%), Gaps = 4/129 (3%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-L 61
A G + LSI Q + + T+P FIP+P VD V+ R P +D+ +
Sbjct: 166 AQPGTKDYGSLSIAIQYYTEAEKIMTVPRTVFIPQPNVDSAVIRLIKRKQPPVDVDDESF 225
Query: 62 IERVVSCIFRYRQKQVYKP--ASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
+VV F R+K + ++L K +++ + +L + P R L+++EF +
Sbjct: 226 FFQVVRASFAQRRKTILNNLISNLPNGKARKEKIERILTENGIDPRRRGETLTMEEFAAL 285
Query: 120 CLAYRD-MC 127
A R+ MC
Sbjct: 286 SNALREVMC 294
>gi|357236972|ref|ZP_09124315.1| dimethyladenosine transferase [Streptococcus criceti HS-6]
gi|356884954|gb|EHI75154.1| dimethyladenosine transferase [Streptococcus criceti HS-6]
Length = 290
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 59/116 (50%), Gaps = 3/116 (2%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-LIERVVSCIFR 71
LSI Q + + F +P F+P P VD ++ R P++++ + + V F
Sbjct: 172 LSIAVQYYMEAEVAFIVPRTVFVPAPNVDSAILKMVRRNQPLVEVQDEDFLFDVAKASFV 231
Query: 72 YRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEFGQICLAYRD 125
+R+K ++ + F K + + + + LE+A ++P +R LS+ +F ++ A +D
Sbjct: 232 HRRKTLWNNLTNRFGKSEDIKAKLEAALEQAELQPSIRGEALSIMDFARLADALKD 287
>gi|292492136|ref|YP_003527575.1| dimethyladenosine transferase [Nitrosococcus halophilus Nc4]
gi|291580731|gb|ADE15188.1| dimethyladenosine transferase [Nitrosococcus halophilus Nc4]
Length = 265
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPII-DLPF 59
+ A G + RLS+M Q +C V+ FT+ AF+P P+VD VV P + ++P
Sbjct: 145 LAAKPGGKDYGRLSVMVQFYCGVEPLFTVKPGAFMPPPKVDSMVVRLKPHRPSLAPEIPH 204
Query: 60 KLIERVVSCIFRYRQKQV 77
+ RVVS F R+K +
Sbjct: 205 AALNRVVSQAFSQRRKTL 222
>gi|303236809|ref|ZP_07323388.1| dimethyladenosine transferase [Prevotella disiens FB035-09AN]
gi|302482977|gb|EFL45993.1| dimethyladenosine transferase [Prevotella disiens FB035-09AN]
Length = 266
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 5/120 (4%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
M A G + LS++ Q W NV++ FT+ F P P+V V+ T + K
Sbjct: 140 MAAQPGNKTYGILSVLMQAWYNVEYLFTVDENVFNPPPKVKSAVISLTRNDVTELGCDEK 199
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
L +RVV +F R+K + +F + R+ E+ + RP QL++ +F ++
Sbjct: 200 LFKRVVKTVFNQRRKMLRVSLRQIFTTKPRE---GFYEQDIMTK--RPEQLTIAQFVKLT 254
>gi|99080785|ref|YP_612939.1| dimethyladenosine transferase [Ruegeria sp. TM1040]
gi|118600897|sp|Q1GI39.1|RSMA_SILST RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|99037065|gb|ABF63677.1| dimethyladenosine transferase [Ruegeria sp. TM1040]
Length = 280
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 5/116 (4%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A G + RL+I+ Q ++P AF P P+V VVH T P
Sbjct: 160 IVAQPGSKAYGRLAILAQWRAEARIALSLPPGAFTPPPKVSSAVVHLTALPEPRYPADAA 219
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
++ RVV+ F R+K + + P+ + L A + P R Q+SV++F
Sbjct: 220 ILSRVVAAAFNQRRKMLRASLKGVSPQ-----IEDHLNAAGIPPTERAEQVSVEDF 270
>gi|402304304|ref|ZP_10823374.1| dimethyladenosine transferase [Haemophilus sputorum HK 2154]
gi|400377892|gb|EJP30757.1| dimethyladenosine transferase [Haemophilus sputorum HK 2154]
Length = 291
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 12 RLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDLPFKLIERVVSC 68
RL+IM Q +C V +P AF P P+VD VV P HP+ D+ + + RV +
Sbjct: 166 RLTIMAQYYCQVMPVLEVPPTAFKPAPKVDSAVVRLMPYKELPHPVKDIYW--LNRVTTQ 223
Query: 69 IFRYRQKQVYKPASLLFPKRKRQ-LVVSLLERA 100
F R+K + S LF + + L VSL RA
Sbjct: 224 AFNQRRKTLRNALSTLFSAEQLEGLGVSLTARA 256
>gi|423388189|ref|ZP_17365415.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG1X1-3]
gi|423416565|ref|ZP_17393654.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG3X2-1]
gi|401110219|gb|EJQ18130.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG3X2-1]
gi|401644379|gb|EJS62071.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG1X1-3]
Length = 292
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 5/126 (3%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G ++ LSI Q + V+ T+P F+P+P VD ++ R P++++ +
Sbjct: 161 LAAKPGTKEYGSLSIAIQYYTEVETVMTVPRTVFVPQPNVDSAIIRLLKRPKPVVEVKDE 220
Query: 61 -LIERVVSCIFRYRQKQVYKPASLL---FPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
VV F R+K + S FPK K +L+ +L + P R LS++EF
Sbjct: 221 TFFFEVVRASFAQRRKTLMNNLSNNLNGFPKDK-ELLDRILTEVGIDPKRRGETLSIEEF 279
Query: 117 GQICLA 122
+ A
Sbjct: 280 ATLSNA 285
>gi|221234694|ref|YP_002517130.1| dimethyladenosine transferase [Caulobacter crescentus NA1000]
gi|220963866|gb|ACL95222.1| dimethyladenosine transferase [Caulobacter crescentus NA1000]
Length = 281
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 48/116 (41%), Gaps = 7/116 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A G + RL+++ Q C +P KAF P P+V VV P+ P
Sbjct: 160 IVAQPGDDAYGRLAVIAQTLCEARTVMDLPAKAFTPPPKVASAVVRLVPKAEPPPAEVVA 219
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+ERV + F R+K +L K L ERA V P R + + F
Sbjct: 220 ALERVTAAAFGQRRK-------MLRSSLKALGGADLCERAGVSPDARAEVIDLAGF 268
>gi|374313885|ref|YP_005060314.1| dimethyladenosine transferase [Serratia symbiotica str. 'Cinara
cedri']
gi|363988111|gb|AEW44302.1| dimethyladenosine transferase [Serratia symbiotica str. 'Cinara
cedri']
Length = 209
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 12/94 (12%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPR---VHPIIDL 57
++A+ G + RLS+M Q +CN+ +P +FIP P V+ VV P +P+ID+
Sbjct: 87 LVASPGNKNYGRLSVMAQYYCNIIPILEVPPTSFIPAPIVESAVVRLVPHNVISNPVIDV 146
Query: 58 PFKLIERVVSCIFRYRQKQV-------YKPASLL 84
+++ + + F R+K + +KPA L+
Sbjct: 147 --RMLHYITTQAFNQRRKTIRNNIGHLFKPAELI 178
>gi|384426649|ref|YP_005636006.1| dimethyladenosine transferase [Xanthomonas campestris pv. raphani
756C]
gi|341935749|gb|AEL05888.1| dimethyladenosine transferase [Xanthomonas campestris pv. raphani
756C]
Length = 262
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 51/117 (43%), Gaps = 8/117 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPR-VHPIIDLPF 59
M A G + RLS+M Q +C V F +P AF P P+VD VV PR ++
Sbjct: 144 MAAGPGSKVYGRLSVMLQAYCEVTALFVVPPGAFRPPPKVDSAVVRLVPRDAASVLIKDR 203
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
K VV F R+K + S + + E A V+P R QL V +F
Sbjct: 204 KRFADVVRAGFGQRRKTLRNALSTVCEP-------AHFEAAGVRPDARAEQLEVADF 253
>gi|229074103|ref|ZP_04207150.1| Dimethyladenosine transferase [Bacillus cereus Rock4-18]
gi|229094763|ref|ZP_04225769.1| Dimethyladenosine transferase [Bacillus cereus Rock3-29]
gi|229100830|ref|ZP_04231645.1| Dimethyladenosine transferase [Bacillus cereus Rock3-28]
gi|228682597|gb|EEL36659.1| Dimethyladenosine transferase [Bacillus cereus Rock3-28]
gi|228688631|gb|EEL42503.1| Dimethyladenosine transferase [Bacillus cereus Rock3-29]
gi|228708997|gb|EEL61123.1| Dimethyladenosine transferase [Bacillus cereus Rock4-18]
Length = 220
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 5/126 (3%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G ++ LSI Q + V+ T+P F+P+P VD ++ R P++++ +
Sbjct: 89 LAAKPGTKEYGSLSIAIQYYTEVETVMTVPRTVFVPQPNVDSAIIRLLKRPKPVVEVTNE 148
Query: 61 -LIERVVSCIFRYRQKQVYKPASLL---FPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
VV F R+K + S FPK K +L+ +L + P R LS++EF
Sbjct: 149 TFFFEVVRASFAQRRKTLMNNLSNNLNGFPKDK-ELLDRILTEVGIDPKRRGETLSIEEF 207
Query: 117 GQICLA 122
+ A
Sbjct: 208 ATLSNA 213
>gi|21230265|ref|NP_636182.1| dimethyladenosine transferase [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66769742|ref|YP_244504.1| dimethyladenosine transferase [Xanthomonas campestris pv.
campestris str. 8004]
gi|27151570|sp|Q8PCE3.1|RSMA_XANCP RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|81304304|sp|Q4UR39.1|RSMA_XANC8 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|21111810|gb|AAM40106.1| dimethyladenosine transferase [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66575074|gb|AAY50484.1| dimethyladenosine transferase [Xanthomonas campestris pv.
campestris str. 8004]
Length = 262
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 51/117 (43%), Gaps = 8/117 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPR-VHPIIDLPF 59
M A G + RLS+M Q +C V F +P AF P P+VD VV PR ++
Sbjct: 144 MAAGPGSKVYGRLSVMLQAYCEVTALFVVPPGAFRPPPKVDSAVVRLVPRDAASVLIKDR 203
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
K VV F R+K + S + + E A V+P R QL V +F
Sbjct: 204 KRFADVVRAGFGQRRKTLRNALSTVCEP-------AHFEAAGVRPDARAEQLEVADF 253
>gi|422866408|ref|ZP_16913033.1| dimethyladenosine transferase [Streptococcus sanguinis SK1058]
gi|327488831|gb|EGF20630.1| dimethyladenosine transferase [Streptococcus sanguinis SK1058]
Length = 290
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 3/115 (2%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDL-PFKLIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ R P + + K ++ F
Sbjct: 172 LSIAVQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRDQPAVAVQDEKFFFKISKASFV 231
Query: 72 YRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEFGQICLAYR 124
+R+K ++ + F K + + + + LERA + P +R LS++EF ++ A +
Sbjct: 232 HRRKTLWNNLTSCFGKSEETKGKLTAALERADLSPSVRGEALSLEEFARLADALK 286
>gi|304569709|ref|YP_011015.2| dimethyladenosine transferase [Desulfovibrio vulgaris str.
Hildenborough]
Length = 291
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 4/116 (3%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A G Q LS+ Q + + F +P F P+P+VD V+ FTPR + K
Sbjct: 167 IVAAPGSRQYGALSVWLQCFTKPEWCFVVPPHVFTPRPKVDSAVLAFTPRTDRPDAVQSK 226
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+ RV+ F+ R+KQ+ +L P +LL + P RP LS + F
Sbjct: 227 RLARVLRLCFQQRRKQLQ---GILRPHVGGD-ASALLAGLGIDPAARPETLSPERF 278
>gi|299141585|ref|ZP_07034721.1| dimethyladenosine transferase [Prevotella oris C735]
gi|298576921|gb|EFI48791.1| dimethyladenosine transferase [Prevotella oris C735]
Length = 265
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 3/120 (2%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
M + G + LS++ Q W NV++ FT+ F P P+V V+ + +
Sbjct: 140 MASEPGNKAYGILSVLMQAWYNVEYLFTVDETVFNPPPKVKSAVIRMMRNEVTDLGCDER 199
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
L +R+V +F R+K + +F K K L K RP QLSVQ+F ++
Sbjct: 200 LFKRLVKTVFNQRRKMLRVSIKQMFSKEKPASAEFLTLDVMTK---RPEQLSVQQFVELT 256
>gi|14591574|ref|NP_143656.1| dimethyladenosine transferase [Pyrococcus horikoshii OT3]
gi|3258259|dbj|BAA30942.1| 290aa long hypothetical dimethyladenosine transferase [Pyrococcus
horikoshii OT3]
Length = 290
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
M+A G RLS+M Q NV+ I AF P+P+VD +V PR I+
Sbjct: 165 MVAKPGSRNYSRLSLMAQALGNVEIVMKIGKGAFYPRPKVDSALVLIEPRKDKIV----- 219
Query: 61 LIERVVSCIFRYRQKQV 77
L E +V +F++R+K V
Sbjct: 220 LNENLVKALFQHRRKTV 236
>gi|389805962|ref|ZP_10203105.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Rhodanobacter thiooxydans LCS2]
gi|388446416|gb|EIM02449.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Rhodanobacter thiooxydans LCS2]
Length = 262
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 60/125 (48%), Gaps = 10/125 (8%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPR-VHPIIDLPF 59
M A G + RLS+M Q C V+ F +P +AF P P+V+ VV P V + D P
Sbjct: 143 MAAEPGSKVYGRLSVMLQLACRVEPLFDVPPEAFRPPPKVESAVVRLVPLPVGELHDAPP 202
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLV-VSLLERACVKPILRPYQLSVQEFGQ 118
+ + VV F R+K + A+ L RQL+ + RA V P R L+ +F +
Sbjct: 203 EHVHAVVKAAFGQRRKTL---ANAL-----RQLLDADAIRRADVDPKARAETLAPADFVR 254
Query: 119 ICLAY 123
+ Y
Sbjct: 255 LAKVY 259
>gi|260775525|ref|ZP_05884422.1| dimethyladenosine transferase [Vibrio coralliilyticus ATCC BAA-450]
gi|260608706|gb|EEX34871.1| dimethyladenosine transferase [Vibrio coralliilyticus ATCC BAA-450]
Length = 268
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 8/117 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPF 59
+ A G + RL++M Q +C V +P AF+P P+VD VV P P
Sbjct: 147 LAAGPGTKAYGRLTVMAQYYCKVVPVLEVPPTAFVPPPKVDSAVVRLVPYETLPYPATSL 206
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
++RV F R+K V K + +LE+ + P +RP L++++F
Sbjct: 207 NWLDRVCRDGFNQRRKTVRN-------CYKSLVNAEILEQLGINPGMRPENLTLEQF 256
>gi|390951197|ref|YP_006414956.1| dimethyladenosine transferase [Thiocystis violascens DSM 198]
gi|390427766|gb|AFL74831.1| dimethyladenosine transferase [Thiocystis violascens DSM 198]
Length = 276
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 61/145 (42%), Gaps = 15/145 (10%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVH---FTPRVHPIIDL 57
++A G + RLS+M Q+ C+ F I AF P P+V+ V PR HPI D
Sbjct: 141 IVADPGDKIYGRLSVMVQSVCSASCLFRIGPGAFTPAPKVESAFVRLRPLRPRPHPIDDP 200
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
L R+V+ F R+K + S L + SL E + LR L V +
Sbjct: 201 --ALHARIVAAAFGQRRKTLRNSLSKLIDQ-------SLFEETGIDQTLRAENLDVASYA 251
Query: 118 QICLAYRDMCEEMPGLYEYTLEDTP 142
++ A C+ + E TP
Sbjct: 252 RLANA---ACQSLTCGVELDGAKTP 273
>gi|407717887|ref|YP_006795292.1| KsgA/Dim1 family 16S ribosomal RNA methyltransferase [Leuconostoc
carnosum JB16]
gi|407241643|gb|AFT81293.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Leuconostoc carnosum JB16]
Length = 295
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 4/125 (3%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV-HPIIDLPFKL 61
A G ++ L++ Q + + +F P P VD VV TP ++D P +L
Sbjct: 166 AMPGTKEYGVLTLTLQYFAQAQLAMKVAAASFNPAPNVDSAVVKLTPLTPEIVVDQPERL 225
Query: 62 IERVVSCIFRYRQKQVYKPASLLFPK--RKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
V+ F +R+K ++ + K ++ + + LE A + P +R +L + EF +
Sbjct: 226 F-GVIKGSFSHRRKSLWNNMLQTYGKDAATKEKITTALESAGISPAIRAERLELAEFTTL 284
Query: 120 CLAYR 124
LA R
Sbjct: 285 YLALR 289
>gi|147676415|ref|YP_001210630.1| dimethyladenosine transferase [Pelotomaculum thermopropionicum SI]
gi|189028813|sp|A5D673.1|RSMA_PELTS RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|146272512|dbj|BAF58261.1| dimethyladenosine transferase [Pelotomaculum thermopropionicum SI]
Length = 295
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 58/128 (45%), Gaps = 5/128 (3%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A+ G LS+ Q + F +P F P P VD VV R P + + +
Sbjct: 166 LTASPGTADYGALSVAVQYFTEPKVLFRVPRTVFYPPPGVDSAVVRLALRPAPAVTVRNE 225
Query: 61 -LIERVVSCIFRYRQKQVYK--PASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+ +VV F +R+K + AS L P R+ L V L+RA + P R LS+ EF
Sbjct: 226 DVFFQVVRAAFGFRRKTLLNSLAASGLGPGREAWLEV--LKRAGIDPQRRGETLSLSEFA 283
Query: 118 QICLAYRD 125
I ++ D
Sbjct: 284 SIADSFLD 291
>gi|260060929|ref|YP_003194009.1| dimethyladenosine transferase [Robiginitalea biformata HTCC2501]
gi|88785061|gb|EAR16230.1| dimethyladenosine transferase [Robiginitalea biformata HTCC2501]
Length = 321
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 12/123 (9%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFKLI 62
A G + LS++ Q + ++RFT+P + F P P+V+ GV+H R D ++ +
Sbjct: 204 AGPGSKTYGILSVLVQAYYLAEYRFTVPPEVFDPPPKVESGVLHLRYRTDTRADWDYQHL 263
Query: 63 ERVVSCIFRYRQKQVYKP-ASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQICL 121
R+V F R+K + SL P ++ ++ +R RP QL V+EF I L
Sbjct: 264 TRLVKTAFNQRRKTLRNSLKSLPVPDYLKE--DAIFDR-------RPEQLEVREF--IAL 312
Query: 122 AYR 124
+ R
Sbjct: 313 SKR 315
>gi|357014629|ref|ZP_09079628.1| RsmA [Paenibacillus elgii B69]
Length = 306
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 2/118 (1%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
M A G + LSI Q +C + +P FIP+P VD V+ R P +++ +
Sbjct: 174 MAAKPGGKDYGSLSIAVQYYCEPEVVTIVPHTVFIPQPNVDSAVIKLKVRERPPVEVEDE 233
Query: 61 -LIERVVSCIFRYRQKQVYKP-ASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
VV F R+K +Y A+ F K + + +L A ++P R LS++E+
Sbjct: 234 SFFFDVVQASFVQRRKTIYNNLAARYFTKETKGQLEGILRNAGIEPSRRGETLSIEEY 291
>gi|294634975|ref|ZP_06713492.1| dimethyladenosine transferase [Edwardsiella tarda ATCC 23685]
gi|451965674|ref|ZP_21918931.1| 16S rRNA dimethyladenosine transferase [Edwardsiella tarda NBRC
105688]
gi|291091574|gb|EFE24135.1| dimethyladenosine transferase [Edwardsiella tarda ATCC 23685]
gi|451315476|dbj|GAC64293.1| 16S rRNA dimethyladenosine transferase [Edwardsiella tarda NBRC
105688]
Length = 271
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 57/134 (42%), Gaps = 15/134 (11%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +C V +P AF P P+VD VV P H + D+
Sbjct: 148 LVAGPDSKTYGRLSVMAQYYCQVIPVLEVPPSAFRPAPKVDSAVVRLIPHRELPHSVSDV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF + L + P R LSV E+
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLGHLFSAEQ-------LSELGIDPARRAETLSVAEY- 257
Query: 118 QICLAYRDMCEEMP 131
C +CE P
Sbjct: 258 --CRLANWLCEHPP 269
>gi|119383648|ref|YP_914704.1| dimethyladenosine transferase [Paracoccus denitrificans PD1222]
gi|166221685|sp|A1B0G4.1|RSMA_PARDP RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|119373415|gb|ABL69008.1| dimethyladenosine transferase [Paracoccus denitrificans PD1222]
Length = 282
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 56/116 (48%), Gaps = 5/116 (4%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A G + RL+++ Q T+P +AF+P P+V VVH T P
Sbjct: 160 IVAQPGGKAYGRLAVLAQWRTEARIVMTLPPEAFVPAPKVHSAVVHLTALPGPRYPADPA 219
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
++ RVV+ F R+K + L P+ + +LL +A + P R ++ +++F
Sbjct: 220 VLNRVVAAGFNQRRKMLRASLKGLHPE-----IEALLIQAGIAPTARAEEIGLEQF 270
>gi|293611446|ref|ZP_06693741.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292826230|gb|EFF84600.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 270
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 54/117 (46%), Gaps = 8/117 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTP-RVHPIIDLPF 59
+ A ++ RLS+M Q +C F +P AF P P+V V P PI
Sbjct: 152 ITAEPNTKEYGRLSVMIQYYCQPTFLFEVPAGAFNPPPKVTSAVFRLVPYDQKPITAKDE 211
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
K + R+V+ +F R+K + SL K + E+A V P+ RP L++ +F
Sbjct: 212 KALARLVAHVFTQRRKTLRN--SL-----KGMIAEDGFEKAGVDPMARPETLTLAQF 261
>gi|281425444|ref|ZP_06256357.1| dimethyladenosine transferase [Prevotella oris F0302]
gi|281400437|gb|EFB31268.1| dimethyladenosine transferase [Prevotella oris F0302]
Length = 265
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 3/120 (2%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
M + G + LS++ Q W NV++ FT+ F P P+V V+ + +
Sbjct: 140 MASEPGNKAYGILSVLMQAWYNVEYLFTVDETVFNPPPKVKSAVIRMMRNEVTDLGCDER 199
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC 120
L +R+V +F R+K + +F K K L K RP QLSVQ+F ++
Sbjct: 200 LFKRLVKTVFNQRRKMLRVSIKQMFSKEKPASAEFLTLDVMTK---RPEQLSVQQFVELT 256
>gi|228898795|ref|ZP_04063078.1| Dimethyladenosine transferase [Bacillus thuringiensis IBL 4222]
gi|228905838|ref|ZP_04069736.1| Dimethyladenosine transferase [Bacillus thuringiensis IBL 200]
gi|228937344|ref|ZP_04099991.1| Dimethyladenosine transferase [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228950590|ref|ZP_04112725.1| Dimethyladenosine transferase [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228956483|ref|ZP_04118280.1| Dimethyladenosine transferase [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228963140|ref|ZP_04124310.1| Dimethyladenosine transferase [Bacillus thuringiensis serovar sotto
str. T04001]
gi|228970230|ref|ZP_04130890.1| Dimethyladenosine transferase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228976800|ref|ZP_04137213.1| Dimethyladenosine transferase [Bacillus thuringiensis Bt407]
gi|229039946|ref|ZP_04189711.1| Dimethyladenosine transferase [Bacillus cereus AH676]
gi|229067806|ref|ZP_04201124.1| Dimethyladenosine transferase [Bacillus cereus F65185]
gi|229107728|ref|ZP_04237365.1| Dimethyladenosine transferase [Bacillus cereus Rock1-15]
gi|229125559|ref|ZP_04254592.1| Dimethyladenosine transferase [Bacillus cereus BDRD-Cer4]
gi|229148451|ref|ZP_04276708.1| Dimethyladenosine transferase [Bacillus cereus m1550]
gi|229176642|ref|ZP_04304047.1| Dimethyladenosine transferase [Bacillus cereus 172560W]
gi|229188327|ref|ZP_04315376.1| Dimethyladenosine transferase [Bacillus cereus ATCC 10876]
gi|228595126|gb|EEK52896.1| Dimethyladenosine transferase [Bacillus cereus ATCC 10876]
gi|228606809|gb|EEK64225.1| Dimethyladenosine transferase [Bacillus cereus 172560W]
gi|228634993|gb|EEK91565.1| Dimethyladenosine transferase [Bacillus cereus m1550]
gi|228657876|gb|EEL13681.1| Dimethyladenosine transferase [Bacillus cereus BDRD-Cer4]
gi|228675701|gb|EEL30908.1| Dimethyladenosine transferase [Bacillus cereus Rock1-15]
gi|228715290|gb|EEL67148.1| Dimethyladenosine transferase [Bacillus cereus F65185]
gi|228727405|gb|EEL78597.1| Dimethyladenosine transferase [Bacillus cereus AH676]
gi|228782896|gb|EEM31061.1| Dimethyladenosine transferase [Bacillus thuringiensis Bt407]
gi|228789465|gb|EEM37384.1| Dimethyladenosine transferase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228796525|gb|EEM43963.1| Dimethyladenosine transferase [Bacillus thuringiensis serovar sotto
str. T04001]
gi|228803173|gb|EEM49994.1| Dimethyladenosine transferase [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228809065|gb|EEM55549.1| Dimethyladenosine transferase [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228822302|gb|EEM68283.1| Dimethyladenosine transferase [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228853778|gb|EEM98537.1| Dimethyladenosine transferase [Bacillus thuringiensis IBL 200]
gi|228860820|gb|EEN05197.1| Dimethyladenosine transferase [Bacillus thuringiensis IBL 4222]
Length = 220
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 5/126 (3%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G ++ LSI Q + V+ T+P F+P+P VD ++ R P++++ +
Sbjct: 89 LAAKPGTKEYGSLSIAIQYYTEVETVMTVPRTVFVPQPNVDSAIIRLLKRPKPVVEVTDE 148
Query: 61 -LIERVVSCIFRYRQKQVYKPASLL---FPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
VV F R+K + S FPK K +L+ +L + P R LS++EF
Sbjct: 149 TFFFEVVRASFAQRRKTLMNNLSNNLNGFPKDK-ELLDRILTEVGIDPKRRGETLSIEEF 207
Query: 117 GQICLA 122
+ A
Sbjct: 208 ATLSNA 213
>gi|431805585|ref|YP_007232486.1| Dimethyladenosine transferase [Liberibacter crescens BT-1]
gi|430799560|gb|AGA64231.1| Dimethyladenosine transferase [Liberibacter crescens BT-1]
Length = 278
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 12/122 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLP-- 58
++AT+ LS++ N F IP +AF P PQ+ VVHF P PI P
Sbjct: 164 IVATKNNASYGILSVLTAWRANARILFDIPPQAFFPSPQIISTVVHFVPHHDPI---PCC 220
Query: 59 FKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQ 118
+ +++V F R+K + + L + SLL++A ++P R LS++EF +
Sbjct: 221 LESLKKVTKTAFGQRRKMLRQSLKNLGGE-------SLLKKARIEPSKRAENLSIEEFCR 273
Query: 119 IC 120
I
Sbjct: 274 IA 275
>gi|397655907|ref|YP_006496609.1| dimethyladenosine transferase [Klebsiella oxytoca E718]
gi|402844991|ref|ZP_10893338.1| dimethyladenosine transferase [Klebsiella sp. OBRC7]
gi|421728322|ref|ZP_16167477.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Klebsiella oxytoca M5al]
gi|423106385|ref|ZP_17094086.1| ribosomal RNA small subunit methyltransferase A [Klebsiella oxytoca
10-5242]
gi|376377822|gb|EHS90589.1| ribosomal RNA small subunit methyltransferase A [Klebsiella oxytoca
10-5242]
gi|394344551|gb|AFN30672.1| Dimethyladenosine transferase [Klebsiella oxytoca E718]
gi|402272591|gb|EJU21809.1| dimethyladenosine transferase [Klebsiella sp. OBRC7]
gi|410371003|gb|EKP25729.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Klebsiella oxytoca M5al]
Length = 273
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 12/123 (9%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
++A + RLS+M Q +C + +P AF P P+VD VV P HP+ ++
Sbjct: 148 LVAGPNSKAYGRLSVMAQYYCQIIPVLEVPPSAFTPPPKVDSAVVRLVPYRTLPHPVKEV 207
Query: 58 PFKLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFG 117
+++ R+ + F R+K + LF V +L + P R +SV ++
Sbjct: 208 --RVLSRITTEAFNQRRKTIRNSLGNLFS-------VEVLTELGIDPAKRAENISVAQYC 258
Query: 118 QIC 120
Q+
Sbjct: 259 QLA 261
>gi|422824475|ref|ZP_16872662.1| dimethyladenosine transferase [Streptococcus sanguinis SK405]
gi|422825445|ref|ZP_16873624.1| dimethyladenosine transferase [Streptococcus sanguinis SK678]
gi|422856577|ref|ZP_16903233.1| dimethyladenosine transferase [Streptococcus sanguinis SK1]
gi|422863495|ref|ZP_16910126.1| dimethyladenosine transferase [Streptococcus sanguinis SK408]
gi|422872361|ref|ZP_16918854.1| dimethyladenosine transferase [Streptococcus sanguinis SK1087]
gi|324992524|gb|EGC24445.1| dimethyladenosine transferase [Streptococcus sanguinis SK405]
gi|324995947|gb|EGC27858.1| dimethyladenosine transferase [Streptococcus sanguinis SK678]
gi|327460748|gb|EGF07083.1| dimethyladenosine transferase [Streptococcus sanguinis SK1]
gi|327472469|gb|EGF17900.1| dimethyladenosine transferase [Streptococcus sanguinis SK408]
gi|328944611|gb|EGG38772.1| dimethyladenosine transferase [Streptococcus sanguinis SK1087]
Length = 290
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 3/115 (2%)
Query: 13 LSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDL-PFKLIERVVSCIFR 71
LSI Q + F +P F+P P VD ++ R P ++ K +V F
Sbjct: 172 LSIAVQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRREQPAAEVQDEKFFFKVSKASFV 231
Query: 72 YRQKQVYKPASLLFPKRK--RQLVVSLLERACVKPILRPYQLSVQEFGQICLAYR 124
+R+K ++ + F K + + + + LERA + P +R LS++EF ++ A +
Sbjct: 232 HRRKTLWNNLTSCFGKSEETKGKLTAALERAELSPSVRGEALSLEEFARLADALK 286
>gi|319953425|ref|YP_004164692.1| dimethyladenosine transferase [Cellulophaga algicola DSM 14237]
gi|319422085|gb|ADV49194.1| dimethyladenosine transferase [Cellulophaga algicola DSM 14237]
Length = 289
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 52/112 (46%), Gaps = 8/112 (7%)
Query: 5 EGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFKLIER 64
EG + LS++ Q + + ++ FT+P F P P+V+ GV+ T + + +D K + R
Sbjct: 174 EGSKTYGILSVLVQAFFDAEYLFTVPPTVFNPPPKVESGVLRLTRKENQTLDCNEKSLYR 233
Query: 65 VVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
VV F R+K + L SL E RP QLSV +F
Sbjct: 234 VVKAAFGQRRKTIRNSLKTF------NLSDSLREDTIFDK--RPEQLSVTDF 277
>gi|190149692|ref|YP_001968217.1| dimethyladenosine transferase [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|307263000|ref|ZP_07544622.1| Ribosomal RNA small subunit methyltransferase A [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
gi|226729747|sp|B3H0R3.1|RSMA_ACTP7 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|189914823|gb|ACE61075.1| dimethyladenosine transferase [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|306871626|gb|EFN03348.1| Ribosomal RNA small subunit methyltransferase A [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
Length = 289
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 12 RLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDLPFKLIERVVSC 68
RL+IM Q +C V +P AF P P+VD VV P HP+ D+ + + RV +
Sbjct: 166 RLTIMAQYYCQVMPVLEVPPTAFKPAPKVDSAVVRLMPHKVLPHPVKDVYW--LNRVTTQ 223
Query: 69 IFRYRQKQVYKPASLLF-PKRKRQLVVSLLERA 100
F R+K + S LF P++ L + L RA
Sbjct: 224 AFNQRRKTLRNALSTLFSPEQLEALSIDLNARA 256
>gi|322834455|ref|YP_004214482.1| dimethyladenosine transferase [Rahnella sp. Y9602]
gi|384259678|ref|YP_005403612.1| KsgA/Dim1 family 16S ribosomal RNA methyltransferase [Rahnella
aquatilis HX2]
gi|321169656|gb|ADW75355.1| dimethyladenosine transferase [Rahnella sp. Y9602]
gi|380755654|gb|AFE60045.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Rahnella aquatilis HX2]
Length = 275
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 6/104 (5%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLP-- 58
++A + RL++M Q +CNV +P ++F P P+V+ VV P H +I P
Sbjct: 148 LVAGPNSKAYGRLTVMAQYYCNVIPVLEVPPESFTPAPKVESAVVRLVP--HEVIPYPVP 205
Query: 59 -FKLIERVVSCIFRYRQKQVYKPASLLF-PKRKRQLVVSLLERA 100
+++ R+ + F R+K V LF P++ +L + L RA
Sbjct: 206 DIRILSRLTTDAFNQRRKTVRNSLGHLFTPEQMTELGLDLSMRA 249
>gi|387153363|ref|YP_005702299.1| dimethyladenosine transferase [Desulfovibrio vulgaris RCH1]
gi|311233807|gb|ADP86661.1| dimethyladenosine transferase [Desulfovibrio vulgaris RCH1]
Length = 300
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 4/116 (3%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++A G Q LS+ Q + + F +P F P+P+VD V+ FTPR + K
Sbjct: 176 IVAAPGSRQYGALSVWLQCFTKPEWCFVVPPHVFTPRPKVDSAVLAFTPRTDRPDAVQSK 235
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
+ RV+ F+ R+KQ+ +L P +LL + P RP LS + F
Sbjct: 236 RLARVLRLCFQQRRKQLQ---GILRPHVGGD-ASALLAGLGIDPAARPETLSPERF 287
>gi|242279077|ref|YP_002991206.1| dimethyladenosine transferase [Desulfovibrio salexigens DSM 2638]
gi|259494247|sp|C6BSW3.1|RSMA_DESAD RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|242121971|gb|ACS79667.1| dimethyladenosine transferase [Desulfovibrio salexigens DSM 2638]
Length = 262
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
Query: 6 GMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFKLIERV 65
G ++ +S+ Q++C D+ F +P F PKP+VD V+ F P + + ++
Sbjct: 143 GSKKYGAISVWIQSFCRTDYLFKVPPTVFKPKPKVDSAVIKFFPLPEEEKPSDIEGLAKL 202
Query: 66 VSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQICLAYRD 125
V F+YR+KQ+ K + V+ E+ V RP LS +F + Y+
Sbjct: 203 VKYCFQYRRKQLGK----ILKSFISDAVIQWAEKEGVSLTDRPEALSPLQFQSL---YKS 255
Query: 126 MCEEMPG 132
+ + P
Sbjct: 256 VKNDFPS 262
>gi|188992955|ref|YP_001904965.1| dimethyladenosine transferase [Xanthomonas campestris pv.
campestris str. B100]
gi|226732640|sp|B0RUI3.1|RSMA_XANCB RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|167734715|emb|CAP52925.1| Dimethyladenosine transferase [Xanthomonas campestris pv.
campestris]
Length = 262
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 51/117 (43%), Gaps = 8/117 (6%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPR-VHPIIDLPF 59
M A G + RLS+M Q +C V F +P AF P P+VD VV PR ++
Sbjct: 144 MAAGPGSKVYGRLSVMLQAYCEVTALFVVPPGAFRPPPKVDSAVVRLVPRDAASVLIKDR 203
Query: 60 KLIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
K VV F R+K + S + + E A V+P R QL V +F
Sbjct: 204 KRFADVVRAGFGQRRKTLRNALSTVCEP-------AHFEAAGVRPDARAEQLEVADF 253
>gi|229027888|ref|ZP_04184043.1| Dimethyladenosine transferase [Bacillus cereus AH1271]
gi|228733402|gb|EEL84229.1| Dimethyladenosine transferase [Bacillus cereus AH1271]
Length = 220
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 5/126 (3%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G ++ LSI Q + V+ T+P F+P+P VD ++ R P++++ +
Sbjct: 89 LAAKPGTKEYGSLSIAIQYYTEVETVMTVPRTVFVPQPNVDSAIIRLLKRPKPVVEVTDE 148
Query: 61 -LIERVVSCIFRYRQKQVYKPASLL---FPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
VV F R+K + S FPK K +L+ +L + P R LS++EF
Sbjct: 149 TFFFEVVRASFAQRRKTLMNNLSNNLNGFPKDK-ELLDRILTEVGIDPKRRGETLSIEEF 207
Query: 117 GQICLA 122
+ A
Sbjct: 208 ATLSNA 213
>gi|228912781|ref|ZP_04076429.1| Dimethyladenosine transferase [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228925295|ref|ZP_04088392.1| Dimethyladenosine transferase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228931544|ref|ZP_04094451.1| Dimethyladenosine transferase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228943848|ref|ZP_04106234.1| Dimethyladenosine transferase [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228983297|ref|ZP_04143511.1| Dimethyladenosine transferase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229089173|ref|ZP_04220455.1| Dimethyladenosine transferase [Bacillus cereus Rock3-42]
gi|229119704|ref|ZP_04248966.1| Dimethyladenosine transferase [Bacillus cereus 95/8201]
gi|229136888|ref|ZP_04265516.1| Dimethyladenosine transferase [Bacillus cereus BDRD-ST26]
gi|229153820|ref|ZP_04281951.1| Dimethyladenosine transferase [Bacillus cereus ATCC 4342]
gi|229194432|ref|ZP_04321236.1| Dimethyladenosine transferase [Bacillus cereus m1293]
gi|228589022|gb|EEK47036.1| Dimethyladenosine transferase [Bacillus cereus m1293]
gi|228629624|gb|EEK86320.1| Dimethyladenosine transferase [Bacillus cereus ATCC 4342]
gi|228646553|gb|EEL02759.1| Dimethyladenosine transferase [Bacillus cereus BDRD-ST26]
gi|228663729|gb|EEL19307.1| Dimethyladenosine transferase [Bacillus cereus 95/8201]
gi|228694136|gb|EEL47817.1| Dimethyladenosine transferase [Bacillus cereus Rock3-42]
gi|228776411|gb|EEM24763.1| Dimethyladenosine transferase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228815805|gb|EEM62040.1| Dimethyladenosine transferase [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228828096|gb|EEM73823.1| Dimethyladenosine transferase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228834342|gb|EEM79882.1| Dimethyladenosine transferase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228846841|gb|EEM91845.1| Dimethyladenosine transferase [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
Length = 220
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 5/126 (3%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G ++ LSI Q + V+ T+P F+P+P VD ++ R P++++ +
Sbjct: 89 LAAKPGTKEYGSLSIAIQYYTEVETVMTVPRTVFVPQPNVDSAIIRLLKRPKPVVEVTDE 148
Query: 61 -LIERVVSCIFRYRQKQVYKPASLL---FPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
VV F R+K + S FPK K +L+ +L + P R LS++EF
Sbjct: 149 TFFFEVVRASFAQRRKTLMNNLSNNLNGFPKDK-ELLDRILTEVGIDPKRRGETLSIEEF 207
Query: 117 GQICLA 122
+ A
Sbjct: 208 ATLSNA 213
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.325 0.142 0.443
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,745,821,789
Number of Sequences: 23463169
Number of extensions: 111702225
Number of successful extensions: 255678
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1367
Number of HSP's successfully gapped in prelim test: 1519
Number of HSP's that attempted gapping in prelim test: 253669
Number of HSP's gapped (non-prelim): 2903
length of query: 165
length of database: 8,064,228,071
effective HSP length: 126
effective length of query: 39
effective length of database: 9,402,836,073
effective search space: 366710606847
effective search space used: 366710606847
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 71 (32.0 bits)