Your job contains 1 sequence.
>psy13718
MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK
LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQIC
LAYRDMCEEMPGLYEYTLEDTPGDIEPEAVAEQEGEGDEIDFNKL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy13718
(165 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|E2RQC3 - symbol:TFB1M "Uncharacterized protein"... 375 1.3e-34 1
UNIPROTKB|Q8WVM0 - symbol:TFB1M "Dimethyladenosine transf... 374 1.7e-34 1
UNIPROTKB|I3LVN4 - symbol:TFB1M "Uncharacterized protein"... 374 1.7e-34 1
RGD|727795 - symbol:Tfb1m "transcription factor B1, mitoc... 373 2.2e-34 1
MGI|MGI:2146851 - symbol:Tfb1m "transcription factor B1, ... 369 5.8e-34 1
UNIPROTKB|E1BWX0 - symbol:TFB1M "Uncharacterized protein"... 367 9.5e-34 1
UNIPROTKB|Q2TBQ0 - symbol:TFB1M "Mitochondrial dimethylad... 353 2.9e-32 1
UNIPROTKB|Q2LZ79 - symbol:mtTFB1 "Dimethyladenosine trans... 278 2.6e-24 1
FB|FBgn0261381 - symbol:mtTFB1 "Mitochondrial Transcripti... 274 6.8e-24 1
WB|WBGene00020189 - symbol:T03F1.7 species:6239 "Caenorha... 238 5.9e-20 1
ZFIN|ZDB-GENE-060929-1010 - symbol:tfb1m "transcription f... 214 1.6e-17 1
UNIPROTKB|F1SB26 - symbol:LOC100737345 "Uncharacterized p... 133 5.9e-09 1
DICTYBASE|DDB_G0286199 - symbol:DDB_G0286199 "Dimethylade... 141 7.4e-09 1
UNIPROTKB|P06992 - symbol:rsmA "16S rRNA m62A1518,m62A151... 127 7.7e-08 1
TIGR_CMR|CBU_1982 - symbol:CBU_1982 "dimethyladenosine tr... 125 1.1e-07 1
UNIPROTKB|G3MZF8 - symbol:TFB1M "Mitochondrial dimethylad... 123 1.2e-07 1
TIGR_CMR|BA_0039 - symbol:BA_0039 "dimethyladenosine tran... 118 4.6e-06 1
UNIPROTKB|Q9KUS2 - symbol:rsmA "Ribosomal RNA small subun... 110 8.9e-05 1
TIGR_CMR|VC_0443 - symbol:VC_0443 "dimethyladenosine tran... 110 8.9e-05 1
>UNIPROTKB|E2RQC3 [details] [associations]
symbol:TFB1M "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042645 "mitochondrial nucleoid"
evidence=IEA] [GO:0000179 "rRNA
(adenine-N6,N6-)-dimethyltransferase activity" evidence=IEA]
InterPro:IPR001737 InterPro:IPR020596 InterPro:IPR020598
Pfam:PF00398 PROSITE:PS01131 SMART:SM00650 GO:GO:0042645
GeneTree:ENSGT00530000063389 GO:GO:0000179 GO:GO:0031167
PANTHER:PTHR11727 Gene3D:1.10.8.100 InterPro:IPR023165 CTD:51106
KO:K15266 OMA:CHRGLGM EMBL:AAEX03000288 RefSeq:XP_533459.2
ProteinModelPortal:E2RQC3 Ensembl:ENSCAFT00000000895 GeneID:476253
KEGG:cfa:476253 NextBio:20851953 Uniprot:E2RQC3
Length = 345
Score = 375 (137.1 bits), Expect = 1.3e-34, P = 1.3e-34
Identities = 78/160 (48%), Positives = 101/160 (63%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G +QR RLSIM Q CNV H TIPG+AF+PKP+VDVGVVHFTP V P I+ PFK
Sbjct: 184 LTANTGSKQRSRLSIMAQYLCNVQHILTIPGQAFVPKPEVDVGVVHFTPLVRPRIEQPFK 243
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKR-QLVVSLLERACVKPILRPYQLSVQEFGQI 119
L+E+VV F++R+K Y+ +LFP+ R + LLE A V P LRP QLSV F +
Sbjct: 244 LVEKVVQNTFQFRRKYCYRGLGMLFPQIHRVESTGKLLELADVDPTLRPSQLSVSHFKSL 303
Query: 120 CLAYRDMCEEMPGLYEYTLEDTPGDIEPEAVAEQEGEGDE 159
C YR MC+E P L+ Y + +++ QE E D+
Sbjct: 304 CDVYRKMCDEDPHLFAYNFRE---ELKQNKSKNQEKEDDK 340
>UNIPROTKB|Q8WVM0 [details] [associations]
symbol:TFB1M "Dimethyladenosine transferase 1,
mitochondrial" species:9606 "Homo sapiens" [GO:0000179 "rRNA
(adenine-N6,N6-)-dimethyltransferase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0042645 "mitochondrial nucleoid"
evidence=IDA] InterPro:IPR001737 InterPro:IPR011530
InterPro:IPR020596 InterPro:IPR020598 Pfam:PF00398 PROSITE:PS01131
SMART:SM00650 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
GO:GO:0042645 EMBL:AL139101 Orphanet:90641 eggNOG:COG0030
GO:GO:0000179 GO:GO:0031167 PANTHER:PTHR11727 Gene3D:1.10.8.100
InterPro:IPR023165 HOGENOM:HOG000227961 CTD:51106
HOVERGEN:HBG082484 KO:K15266 OMA:CHRGLGM OrthoDB:EOG4KWJTD
EMBL:AF151833 EMBL:BC005183 EMBL:BC017788 IPI:IPI00291525
RefSeq:NP_057104.2 UniGene:Hs.279908 HSSP:P06992
ProteinModelPortal:Q8WVM0 SMR:Q8WVM0 IntAct:Q8WVM0 STRING:Q8WVM0
PhosphoSite:Q8WVM0 DMDM:74751555 PaxDb:Q8WVM0 PRIDE:Q8WVM0
DNASU:51106 Ensembl:ENST00000367166 GeneID:51106 KEGG:hsa:51106
UCSC:uc003qqj.4 GeneCards:GC06M155578 HGNC:HGNC:17037 HPA:HPA029428
MIM:607033 neXtProt:NX_Q8WVM0 PharmGKB:PA38198 InParanoid:Q8WVM0
PhylomeDB:Q8WVM0 ChiTaRS:TFB1M GenomeRNAi:51106 NextBio:53841
ArrayExpress:Q8WVM0 Bgee:Q8WVM0 CleanEx:HS_TFB1M
Genevestigator:Q8WVM0 Uniprot:Q8WVM0
Length = 346
Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 74/166 (44%), Positives = 107/166 (64%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G +QR RLS+M Q CNV H FTIPG+AF+PKP+VDVGVVHFTP + P I+ PFK
Sbjct: 184 LAANTGSKQRSRLSVMAQYLCNVRHIFTIPGQAFVPKPEVDVGVVHFTPLIQPKIEQPFK 243
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKR-QLVVSLLERACVKPILRPYQLSVQEFGQI 119
L+E+VV +F++R+K ++ +LFP+ +R + LLE A + P LRP QLS+ F +
Sbjct: 244 LVEKVVQNVFQFRRKYCHRGLRMLFPEAQRLESTGRLLELADIDPTLRPRQLSISHFKSL 303
Query: 120 CLAYRDMCEEMPGLYEYTLEDTPGDIEPEAVAEQEGEGDEIDFNKL 165
C YR MC+E P L+ Y + +++ +E E D+ + +L
Sbjct: 304 CDVYRKMCDEDPQLFAYNFRE---ELKRRKSKNEEKEEDDAENYRL 346
>UNIPROTKB|I3LVN4 [details] [associations]
symbol:TFB1M "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042645 "mitochondrial nucleoid" evidence=IEA]
[GO:0000179 "rRNA (adenine-N6,N6-)-dimethyltransferase activity"
evidence=IEA] InterPro:IPR001737 InterPro:IPR020598 Pfam:PF00398
SMART:SM00650 GO:GO:0042645 GeneTree:ENSGT00530000063389
GO:GO:0000179 GO:GO:0031167 PANTHER:PTHR11727 Gene3D:1.10.8.100
InterPro:IPR023165 EMBL:CU407142 Ensembl:ENSSSCT00000031943
OMA:LFTIPGQ Uniprot:I3LVN4
Length = 245
Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 73/141 (51%), Positives = 96/141 (68%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+IA++G +QR RLSIM Q C+V H TIPG+AF+PKP+VDVGVVHFTP P I+ PFK
Sbjct: 89 LIASKGSKQRSRLSIMAQYLCDVQHVLTIPGRAFVPKPEVDVGVVHFTPLTQPKIEQPFK 148
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKR-QLVVSLLERACVKPILRPYQLSVQEFGQI 119
L+E+VV F++R+K Y+ +LFP+ +R + LLE A V P LRP QLSV F +
Sbjct: 149 LVEKVVQNAFQFRRKYCYRGLGMLFPEAQRMERTGKLLESADVDPTLRPTQLSVSHFQSL 208
Query: 120 CLAYRDMCEEMPGLYEYTLED 140
C YR MC+E P L+ Y +
Sbjct: 209 CDVYRKMCDEDPHLFAYNFRE 229
>RGD|727795 [details] [associations]
symbol:Tfb1m "transcription factor B1, mitochondrial"
species:10116 "Rattus norvegicus" [GO:0000179 "rRNA
(adenine-N6,N6-)-dimethyltransferase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0042645 "mitochondrial nucleoid"
evidence=IEA;ISO] InterPro:IPR001737 InterPro:IPR011530
InterPro:IPR020596 InterPro:IPR020598 Pfam:PF00398 PROSITE:PS01131
SMART:SM00650 RGD:727795 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
GO:GO:0042645 eggNOG:COG0030 GeneTree:ENSGT00530000063389
GO:GO:0000179 GO:GO:0031167 PANTHER:PTHR11727 Gene3D:1.10.8.100
InterPro:IPR023165 HOGENOM:HOG000227961 CTD:51106
HOVERGEN:HBG082484 KO:K15266 OrthoDB:EOG4KWJTD HSSP:P06992
EMBL:AY198392 EMBL:BC070907 IPI:IPI00421923 RefSeq:NP_852139.2
UniGene:Rn.62385 ProteinModelPortal:Q811P6 STRING:Q811P6
PRIDE:Q811P6 Ensembl:ENSRNOT00000022397 GeneID:308140
KEGG:rno:308140 UCSC:RGD:727795 InParanoid:Q811P6 NextBio:658396
Genevestigator:Q811P6 Uniprot:Q811P6
Length = 345
Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
Identities = 74/159 (46%), Positives = 104/159 (65%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++AT G +QR RLSIM Q CNV+H FTIPGKAF+PKP+VDVGVVH P V P I PFK
Sbjct: 184 LVATTGSKQRSRLSIMAQYLCNVEHLFTIPGKAFVPKPEVDVGVVHLMPLVQPKIKQPFK 243
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKR-QLVVSLLERACVKPILRPYQLSVQEFGQI 119
L+E+VV +F++R+K ++ +LFP+ +R + LL+ A + P LRP LS+ F +
Sbjct: 244 LVEKVVQNVFQFRRKYCHRGLGMLFPEAQRLESTGRLLQLADIDPTLRPTHLSLMHFKSL 303
Query: 120 CLAYRDMCEEMPGLYEYTLEDTPGDIEPEAVAEQEGEGD 158
C YR MC+E P L+ Y + +++ + QE +GD
Sbjct: 304 CDVYRKMCDEDPQLFAYNFRE---ELKQKKRKGQEKDGD 339
>MGI|MGI:2146851 [details] [associations]
symbol:Tfb1m "transcription factor B1, mitochondrial"
species:10090 "Mus musculus" [GO:0000154 "rRNA modification"
evidence=IEA] [GO:0000179 "rRNA
(adenine-N6,N6-)-dimethyltransferase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0008649 "rRNA methyltransferase activity"
evidence=IEA] [GO:0016433 "rRNA (adenine) methyltransferase
activity" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0032259 "methylation" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=ISO] InterPro:IPR001737
InterPro:IPR011530 InterPro:IPR020596 InterPro:IPR020598
Pfam:PF00398 PROSITE:PS01131 SMART:SM00650 MGI:MGI:2146851
GO:GO:0005739 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
GO:GO:0042645 eggNOG:COG0030 GeneTree:ENSGT00530000063389
GO:GO:0000179 GO:GO:0031167 PANTHER:PTHR11727 Gene3D:1.10.8.100
InterPro:IPR023165 HOGENOM:HOG000227961 CTD:51106
HOVERGEN:HBG082484 KO:K15266 OMA:CHRGLGM OrthoDB:EOG4KWJTD
HSSP:P06992 EMBL:AF508971 EMBL:BC032930 IPI:IPI00170339
RefSeq:NP_666186.1 UniGene:Mm.226554 ProteinModelPortal:Q8JZM0
SMR:Q8JZM0 STRING:Q8JZM0 PhosphoSite:Q8JZM0 PaxDb:Q8JZM0
PRIDE:Q8JZM0 Ensembl:ENSMUST00000041003 GeneID:224481
KEGG:mmu:224481 UCSC:uc008aes.1 InParanoid:Q8JZM0 NextBio:377199
Bgee:Q8JZM0 CleanEx:MM_TFB1M Genevestigator:Q8JZM0 Uniprot:Q8JZM0
Length = 345
Score = 369 (135.0 bits), Expect = 5.8e-34, P = 5.8e-34
Identities = 73/159 (45%), Positives = 103/159 (64%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
++AT G +Q RLSIM Q CNV+H FTIPGKAF+PKP+VDVGVVH TP + P I PFK
Sbjct: 184 LVATTGSKQHSRLSIMAQYLCNVEHLFTIPGKAFVPKPKVDVGVVHLTPLIEPKIKQPFK 243
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKR-QLVVSLLERACVKPILRPYQLSVQEFGQI 119
L+E+VV F++R+K ++ +LFP+ +R + LL+ A + P LRP LS+ F +
Sbjct: 244 LVEKVVQNAFQFRRKYCHRGLGMLFPEAQRLESTGRLLQLADIDPTLRPTHLSLMHFKSL 303
Query: 120 CLAYRDMCEEMPGLYEYTLEDTPGDIEPEAVAEQEGEGD 158
C YR MC+E P L+ Y + +++ + QE +GD
Sbjct: 304 CDVYRKMCDEDPQLFTYNFRE---ELKQKKSKGQEKDGD 339
>UNIPROTKB|E1BWX0 [details] [associations]
symbol:TFB1M "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000179 "rRNA (adenine-N6,N6-)-dimethyltransferase
activity" evidence=IEA] [GO:0042645 "mitochondrial nucleoid"
evidence=IEA] InterPro:IPR001737 InterPro:IPR020598 Pfam:PF00398
SMART:SM00650 GO:GO:0042645 GeneTree:ENSGT00530000063389
GO:GO:0000179 GO:GO:0031167 PANTHER:PTHR11727 Gene3D:1.10.8.100
InterPro:IPR023165 CTD:51106 KO:K15266 OMA:CHRGLGM
EMBL:AADN02025409 IPI:IPI00575167 RefSeq:XP_426165.2
UniGene:Gga.12370 Ensembl:ENSGALT00000022196 GeneID:428608
KEGG:gga:428608 NextBio:20829552 Uniprot:E1BWX0
Length = 350
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 75/167 (44%), Positives = 105/167 (62%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G +QR RLSIM Q+ C VD+ F IPG+AF+PKP VDV VVHFTP V P I PF+
Sbjct: 184 LTANTGGKQRSRLSIMSQHLCTVDNCFVIPGQAFVPKPDVDVAVVHFTPLVQPKIQQPFE 243
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKR-QLVVSLLERACVKPILRPYQLSVQEFGQI 119
L+E+VV +F++R+K Y+ +LFP+R+R + L+ A V P LRP+QL++ F +
Sbjct: 244 LVEKVVQSVFQFRRKYCYRGVEILFPERERLKKTEQLMMAADVDPTLRPFQLTMAHFRNL 303
Query: 120 CLAYRDMCEEMPGLYEYTLEDTPGDIE----PEAV--AEQEGEGDEI 160
C YR MC+E P L+ Y + G + PE++ EQ E D +
Sbjct: 304 CNTYRKMCDEDPSLFAYNYREELGQTKRKHSPESIDQLEQTKEEDHL 350
>UNIPROTKB|Q2TBQ0 [details] [associations]
symbol:TFB1M "Mitochondrial dimethyladenosine transferase
1" species:9913 "Bos taurus" [GO:0042645 "mitochondrial nucleoid"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0000179 "rRNA
(adenine-N6,N6-)-dimethyltransferase activity" evidence=IEA]
InterPro:IPR001737 InterPro:IPR011530 InterPro:IPR020596
InterPro:IPR020598 Pfam:PF00398 PROSITE:PS01131 SMART:SM00650
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 GO:GO:0042645
eggNOG:COG0030 GeneTree:ENSGT00530000063389 GO:GO:0000179
GO:GO:0031167 PANTHER:PTHR11727 Gene3D:1.10.8.100
InterPro:IPR023165 HOGENOM:HOG000227961 EMBL:BC109841 EMBL:DT811342
IPI:IPI00721835 IPI:IPI00829518 RefSeq:NP_001070364.1
RefSeq:NP_001108082.1 UniGene:Bt.56407 ProteinModelPortal:Q2TBQ0
STRING:Q2TBQ0 PRIDE:Q2TBQ0 Ensembl:ENSBTAT00000045233
Ensembl:ENSBTAT00000045235 GeneID:533438 KEGG:bta:533438 CTD:51106
HOVERGEN:HBG082484 InParanoid:Q2TBQ0 KO:K15266 OMA:CHRGLGM
OrthoDB:EOG4KWJTD NextBio:20876036 ArrayExpress:Q2TBQ0
Uniprot:Q2TBQ0
Length = 341
Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
Identities = 70/141 (49%), Positives = 92/141 (65%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ AT G +QR RLSIM Q C+V H TIPG+AF+PKP+VD GVVHFTP P I PFK
Sbjct: 184 LTATTGSKQRSRLSIMAQYLCDVQHILTIPGQAFVPKPEVDSGVVHFTPLTRPRIKQPFK 243
Query: 61 LIERVVSCIFRYRQKQVYKPASLLFPKRKR-QLVVSLLERACVKPILRPYQLSVQEFGQI 119
L+E+VV F++R+K ++ +LFP+ +R + LLE A V P LRP QL+V F +
Sbjct: 244 LVEKVVQNAFQFRRKYCHRGLGMLFPEARRLESTGKLLELADVDPTLRPTQLTVSHFKSL 303
Query: 120 CLAYRDMCEEMPGLYEYTLED 140
C YR MC+E P L+ Y +
Sbjct: 304 CDVYRKMCDEDPHLFAYNFRE 324
>UNIPROTKB|Q2LZ79 [details] [associations]
symbol:mtTFB1 "Dimethyladenosine transferase 1,
mitochondrial" species:46245 "Drosophila pseudoobscura
pseudoobscura" [GO:0003712 "transcription cofactor activity"
evidence=ISS] [GO:0005759 "mitochondrial matrix" evidence=ISS]
[GO:0006390 "transcription from mitochondrial promoter"
evidence=ISS] InterPro:IPR001737 InterPro:IPR020596
InterPro:IPR020598 Pfam:PF00398 PROSITE:PS01131 SMART:SM00650
GO:GO:0005759 GO:GO:0003712 EMBL:CH379069 eggNOG:COG0030
GO:GO:0000179 GO:GO:0031167 PANTHER:PTHR11727 GO:GO:0006390
Gene3D:1.10.8.100 InterPro:IPR023165 KO:K15266 OrthoDB:EOG4DNCM5
RefSeq:XP_001353894.2 GeneID:4813779 KEGG:dpo:Dpse_GA20255
FlyBase:FBgn0080250 InParanoid:Q2LZ79 Uniprot:Q2LZ79
Length = 337
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 66/152 (43%), Positives = 87/152 (57%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFKLI 62
A G EQRCRLS+M Q W +F IPGKAF+PKPQVDVGVV P P LPF L+
Sbjct: 185 APVGSEQRCRLSVMSQIWTEPVMKFIIPGKAFVPKPQVDVGVVKLIPLKQPKTQLPFSLV 244
Query: 63 ERVVSCIFRYRQKQVYKP-ASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQICL 121
ERVV IF RQK + +LL P + + +L +RA V+ LR ++LSV + ++
Sbjct: 245 ERVVRHIFSMRQKYCRRGYGTLLPPDSREETTQTLFQRADVRDTLRSFELSVPQCLRLAD 304
Query: 122 AYRDMCEEMPGL--YEYTLEDTPGDIEPEAVA 151
AY + +E P + Y+Y P D+ A A
Sbjct: 305 AYAEYIKEHPEVEAYDYRGPKNP-DVSGAAAA 335
>FB|FBgn0261381 [details] [associations]
symbol:mtTFB1 "Mitochondrial Transcription Factor B1"
species:7227 "Drosophila melanogaster" [GO:0016433 "rRNA (adenine)
methyltransferase activity" evidence=ISS] [GO:0000154 "rRNA
modification" evidence=IEA] [GO:0000179 "rRNA
(adenine-N6,N6-)-dimethyltransferase activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006417 "regulation
of translation" evidence=IMP] [GO:0006390 "transcription from
mitochondrial promoter" evidence=ISS] [GO:0005759 "mitochondrial
matrix" evidence=ISS] [GO:0003712 "transcription cofactor activity"
evidence=ISS] InterPro:IPR001737 InterPro:IPR020596
InterPro:IPR020598 Pfam:PF00398 PROSITE:PS01131 SMART:SM00650
EMBL:AE014296 GO:GO:0006417 GO:GO:0005759 GO:GO:0003712
eggNOG:COG0030 GeneTree:ENSGT00530000063389 GO:GO:0000179
GO:GO:0031167 PANTHER:PTHR11727 GO:GO:0006390 Gene3D:1.10.8.100
InterPro:IPR023165 KO:K15266 OMA:CHRGLGM EMBL:AY069635
RefSeq:NP_648499.1 UniGene:Dm.29643 ProteinModelPortal:Q9VTM5
SMR:Q9VTM5 STRING:Q9VTM5 PaxDb:Q9VTM5 EnsemblMetazoa:FBtr0302272
GeneID:8674019 KEGG:dme:Dmel_CG42631 CTD:8674019
FlyBase:FBgn0261381 InParanoid:Q9VTM5 OrthoDB:EOG4DNCM5
PhylomeDB:Q9VTM5 NextBio:813049 Uniprot:Q9VTM5
Length = 330
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 63/145 (43%), Positives = 82/145 (56%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFKLI 62
A G EQRCRLS+M Q W +FTIPGKAF+PKPQVDVGVV P P LPF L+
Sbjct: 185 APVGGEQRCRLSVMSQVWTEPVMKFTIPGKAFVPKPQVDVGVVKLIPLKRPKTQLPFHLV 244
Query: 63 ERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVS-LLERACVKPILRPYQLSVQEFGQICL 121
ERVV IF RQK + L P R+ V L +RA V+ LRP++L+V++ ++
Sbjct: 245 ERVVRHIFSMRQKYCRRGYGTLLPPEDREEVAEKLFQRAEVQDTLRPFELTVEQCLRLAE 304
Query: 122 AYRDMCEEMPGLYEYTLEDTPGDIE 146
Y + P + Y P ++E
Sbjct: 305 VYSEHLVTRPEVAAYDYR-APKNVE 328
>WB|WBGene00020189 [details] [associations]
symbol:T03F1.7 species:6239 "Caenorhabditis elegans"
[GO:0000154 "rRNA modification" evidence=IEA] [GO:0000179 "rRNA
(adenine-N6,N6-)-dimethyltransferase activity" evidence=IEA]
[GO:0008649 "rRNA methyltransferase activity" evidence=IEA]
InterPro:IPR001737 InterPro:IPR020596 InterPro:IPR020598
Pfam:PF00398 PROSITE:PS01131 SMART:SM00650 GO:GO:0005739
GO:GO:0006355 GO:GO:0006351 EMBL:FO080917 eggNOG:COG0030
GeneTree:ENSGT00530000063389 GO:GO:0000179 GO:GO:0031167
PANTHER:PTHR11727 Gene3D:1.10.8.100 InterPro:IPR023165
HOGENOM:HOG000227961 KO:K15266 OMA:CHRGLGM PIR:T29195
RefSeq:NP_491242.2 ProteinModelPortal:P91424 SMR:P91424
STRING:P91424 PaxDb:P91424 EnsemblMetazoa:T03F1.7 GeneID:188022
KEGG:cel:CELE_T03F1.7 UCSC:T03F1.7 CTD:188022 WormBase:T03F1.7
InParanoid:P91424 NextBio:937314 Uniprot:P91424
Length = 367
Score = 238 (88.8 bits), Expect = 5.9e-20, P = 5.9e-20
Identities = 49/133 (36%), Positives = 75/133 (56%)
Query: 8 EQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFKLIERVVS 67
+ R R+SIM Q F I G F+P+PQVDVGVV F PR P+++ F+++E+V
Sbjct: 191 DTRSRISIMSQYVAEPKMVFQISGSCFVPRPQVDVGVVRFVPRKTPLVNTSFEVLEKVCR 250
Query: 68 CIFRYRQKQVYKPASLLFPKR-KRQLVVSLLERACVKPILRPYQLSVQEFGQICLAYRDM 126
+F YRQK V K L+P+ + +L LL++ + P +L +++F + Y +
Sbjct: 251 QVFHYRQKYVTKGLKTLYPEELEDELSDDLLKKCRIDPTTTSIRLGIEQFADLAEGYNEQ 310
Query: 127 CEEMPGL--YEYT 137
C PGL Y+YT
Sbjct: 311 CIRYPGLFLYDYT 323
>ZFIN|ZDB-GENE-060929-1010 [details] [associations]
symbol:tfb1m "transcription factor B1,
mitochondrial" species:7955 "Danio rerio" [GO:0000154 "rRNA
modification" evidence=IEA] [GO:0000179 "rRNA
(adenine-N6,N6-)-dimethyltransferase activity" evidence=IEA]
[GO:0008649 "rRNA methyltransferase activity" evidence=IEA]
InterPro:IPR001737 InterPro:IPR020598 Pfam:PF00398 SMART:SM00650
ZFIN:ZDB-GENE-060929-1010 eggNOG:COG0030 GO:GO:0000179
GO:GO:0031167 PANTHER:PTHR11727 HOGENOM:HOG000227961 CTD:51106
HOVERGEN:HBG082484 KO:K15266 OrthoDB:EOG4KWJTD EMBL:BC124402
IPI:IPI00613557 RefSeq:NP_001070237.1 UniGene:Dr.110030
ProteinModelPortal:Q08C48 STRING:Q08C48 GeneID:767802
KEGG:dre:767802 InParanoid:Q08C48 NextBio:20918180 Uniprot:Q08C48
Length = 269
Score = 214 (80.4 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 41/75 (54%), Positives = 52/75 (69%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A+ G QR RLS+M Q V FTIPG+AF+PKP VDVGVVHFTP P I PFK
Sbjct: 184 LTASTGSRQRSRLSVMAQYLTTVKSCFTIPGQAFVPKPNVDVGVVHFTPLAQPQIQQPFK 243
Query: 61 LIERVVSCIFRYRQK 75
L+E++V F++R+K
Sbjct: 244 LVEKIVKNAFQFRRK 258
>UNIPROTKB|F1SB26 [details] [associations]
symbol:LOC100737345 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0000179 "rRNA (adenine-N6,N6-)-dimethyltransferase
activity" evidence=IEA] InterPro:IPR001737 Pfam:PF00398
GeneTree:ENSGT00530000063389 GO:GO:0000179 GO:GO:0031167
PANTHER:PTHR11727 Ensembl:ENSSSCT00000004495 OMA:NESRSRI
Uniprot:F1SB26
Length = 139
Score = 133 (51.9 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHF 47
+IA++G +QR RLSIM Q C+V H TIPG+AF+PKP+V + +
Sbjct: 89 LIASKGSKQRSRLSIMAQYLCDVQHVLTIPGRAFVPKPEVSFSLFQY 135
>DICTYBASE|DDB_G0286199 [details] [associations]
symbol:DDB_G0286199 "Dimethyladenosine transferase 1,
mitochondrial" species:44689 "Dictyostelium discoideum" [GO:0031167
"rRNA methylation" evidence=IEA] [GO:0008649 "rRNA
methyltransferase activity" evidence=IEA] [GO:0000179 "rRNA
(adenine-N6,N6-)-dimethyltransferase activity" evidence=IEA]
[GO:0000154 "rRNA modification" evidence=IEA] InterPro:IPR001737
InterPro:IPR020596 InterPro:IPR020598 Pfam:PF00398 PROSITE:PS01131
SMART:SM00650 dictyBase:DDB_G0286199 EMBL:AAFI02000085
eggNOG:COG0030 GO:GO:0000179 GO:GO:0031167 PANTHER:PTHR11727
Gene3D:1.10.8.100 InterPro:IPR023165 KO:K15266 RefSeq:XP_637775.1
ProteinModelPortal:Q54M56 EnsemblProtists:DDB0186850 GeneID:8625489
KEGG:ddi:DDB_G0286199 InParanoid:Q54M56 OMA:NITDKIC
ProtClustDB:CLSZ2728899 Uniprot:Q54M56
Length = 485
Score = 141 (54.7 bits), Expect = 7.4e-09, P = 7.4e-09
Identities = 41/124 (33%), Positives = 60/124 (48%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK-- 60
A G E+ RLS+M Q C ++IPG AF+P P+VD VV PR+ P+ D P K
Sbjct: 185 AQVGSEEYSRLSVMVQQMCQPSIVYSIPGTAFVPPPKVDASVVAIEPRISPLGDEPVKDH 244
Query: 61 -LIERVVSCIFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
E V +F R+K++ L + SLL + P +R L +++F +I
Sbjct: 245 HYFEFVCRELFSQRRKKLSNTIKTLGKDAE-----SLLGDD-IDPKIRTQNLQIEQFVKI 298
Query: 120 CLAY 123
Y
Sbjct: 299 TNRY 302
>UNIPROTKB|P06992 [details] [associations]
symbol:rsmA "16S rRNA m62A1518,m62A1519
dimethyltransferase" species:83333 "Escherichia coli K-12"
[GO:0052908 "16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase
activity" evidence=IEA] [GO:0070475 "rRNA base methylation"
evidence=IMP] [GO:0000028 "ribosomal small subunit assembly"
evidence=IMP] [GO:0003729 "mRNA binding" evidence=IDA] [GO:0019843
"rRNA binding" evidence=IDA] [GO:0003690 "double-stranded DNA
binding" evidence=IDA] [GO:0046677 "response to antibiotic"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IMP]
[GO:0000179 "rRNA (adenine-N6,N6-)-dimethyltransferase activity"
evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IEA]
HAMAP:MF_00607 InterPro:IPR001737 InterPro:IPR011530
InterPro:IPR020596 InterPro:IPR020598 Pfam:PF00398 PROSITE:PS01131
SMART:SM00650 GO:GO:0005737 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003729
GO:GO:0046677 GO:GO:0003690 GO:GO:0019843 EMBL:X04711 GO:GO:0000028
eggNOG:COG0030 GO:GO:0000179 PANTHER:PTHR11727 TIGRFAMs:TIGR00755
GO:GO:0070475 Gene3D:1.10.8.100 InterPro:IPR023165 EMBL:M68521
PDB:4ADV PDBsum:4ADV KO:K02528 OMA:PVPNVDS ProtClustDB:PRK00274
GO:GO:0052908 HOGENOM:HOG000227962 EMBL:M11054 EMBL:X06536
PIR:A24527 RefSeq:NP_414593.1 RefSeq:YP_488357.1 PDB:1QYR PDB:3TPZ
PDBsum:1QYR PDBsum:3TPZ ProteinModelPortal:P06992 SMR:P06992
DIP:DIP-10076N IntAct:P06992 MINT:MINT-1246440 PRIDE:P06992
EnsemblBacteria:EBESCT00000002260 EnsemblBacteria:EBESCT00000002261
EnsemblBacteria:EBESCT00000002262 EnsemblBacteria:EBESCT00000002263
EnsemblBacteria:EBESCT00000018417 GeneID:12932018 GeneID:944939
KEGG:ecj:Y75_p0051 KEGG:eco:b0051 PATRIC:32115201 EchoBASE:EB0518
EcoGene:EG10523 BioCyc:EcoCyc:EG10523-MONOMER
BioCyc:ECOL316407:JW0050-MONOMER BioCyc:MetaCyc:EG10523-MONOMER
BRENDA:2.1.1.48 EvolutionaryTrace:P06992 Genevestigator:P06992
Uniprot:P06992
Length = 273
Score = 127 (49.8 bits), Expect = 7.7e-08, P = 7.7e-08
Identities = 34/111 (30%), Positives = 54/111 (48%)
Query: 12 RLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDLPFKLIERVVSC 68
RLS+M Q +CNV +P AF P P+VD VV P HP+ D+ +++ R+ +
Sbjct: 159 RLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDV--RVLSRITTE 216
Query: 69 IFRYRQKQVYKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
F R+K + LF V +L + P +R +SV ++ Q+
Sbjct: 217 AFNQRRKTIRNSLGNLFS-------VEVLTGMGIDPAMRAENISVAQYCQM 260
>TIGR_CMR|CBU_1982 [details] [associations]
symbol:CBU_1982 "dimethyladenosine transferase"
species:227377 "Coxiella burnetii RSA 493" [GO:0000154 "rRNA
modification" evidence=ISS] [GO:0000179 "rRNA
(adenine-N6,N6-)-dimethyltransferase activity" evidence=ISS]
HAMAP:MF_00607 InterPro:IPR001737 InterPro:IPR011530
InterPro:IPR020596 InterPro:IPR020598 Pfam:PF00398 PROSITE:PS01131
SMART:SM00650 GO:GO:0005737 GO:GO:0003723 EMBL:AE016828
GenomeReviews:AE016828_GR eggNOG:COG0030 GO:GO:0000179
GO:GO:0031167 PANTHER:PTHR11727 TIGRFAMs:TIGR00755
Gene3D:1.10.8.100 InterPro:IPR023165 KO:K02528 OMA:PVPNVDS
ProtClustDB:PRK00274 GO:GO:0052908 HOGENOM:HOG000227962
RefSeq:NP_820957.2 PDB:3TQS PDBsum:3TQS ProteinModelPortal:Q83AC2
GeneID:1209895 KEGG:cbu:CBU_1982 PATRIC:17932705
BioCyc:CBUR227377:GJ7S-1955-MONOMER Uniprot:Q83AC2
Length = 258
Score = 125 (49.1 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 39/120 (32%), Positives = 60/120 (50%)
Query: 3 ATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFKL- 61
A G RLS+M Q +C+ + FT+ +AF P P+V+ ++ PR H + L
Sbjct: 143 AEVGSHDYGRLSVMAQYFCDNTYLFTVSPQAFTPPPRVESAIIRLIPR-HNFTPVAKNLD 201
Query: 62 -IERVVSCIFRYRQKQVYKPAS-LLFPKRKRQLVVSLLERACVKPILRPYQLSVQEFGQI 119
+ VV F YR+K V L+ P + LLE + P LRP +L+V++F +I
Sbjct: 202 QLSHVVKEAFSYRRKTVGNALKKLINPSQW-----PLLE---INPQLRPQELTVEDFVKI 253
>UNIPROTKB|G3MZF8 [details] [associations]
symbol:TFB1M "Mitochondrial dimethyladenosine transferase
1" species:9913 "Bos taurus" [GO:0000179 "rRNA
(adenine-N6,N6-)-dimethyltransferase activity" evidence=IEA]
InterPro:IPR001737 InterPro:IPR020596 InterPro:IPR020598
Pfam:PF00398 PROSITE:PS01131 SMART:SM00650
GeneTree:ENSGT00530000063389 GO:GO:0000179 GO:GO:0031167
PANTHER:PTHR11727 EMBL:DAAA02027259 Ensembl:ENSBTAT00000065189
Uniprot:G3MZF8
Length = 226
Score = 123 (48.4 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQ 39
+ AT G +QR RLSIM Q C+V H TIPG+AF+PKP+
Sbjct: 184 LTATTGSKQRSRLSIMAQYLCDVQHILTIPGQAFVPKPE 222
>TIGR_CMR|BA_0039 [details] [associations]
symbol:BA_0039 "dimethyladenosine transferase"
species:198094 "Bacillus anthracis str. Ames" [GO:0000154 "rRNA
modification" evidence=ISS] [GO:0000179 "rRNA
(adenine-N6,N6-)-dimethyltransferase activity" evidence=ISS]
[GO:0046677 "response to antibiotic" evidence=ISS] HAMAP:MF_00607
InterPro:IPR001737 InterPro:IPR011530 InterPro:IPR020596
InterPro:IPR020598 Pfam:PF00398 PROSITE:PS01131 SMART:SM00650
GO:GO:0005737 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003723 eggNOG:COG0030
GO:GO:0000179 GO:GO:0031167 PANTHER:PTHR11727 TIGRFAMs:TIGR00755
Gene3D:1.10.8.100 InterPro:IPR023165 KO:K02528 OMA:PVPNVDS
ProtClustDB:PRK00274 GO:GO:0052908 RefSeq:NP_842608.1
RefSeq:YP_016643.1 RefSeq:YP_026327.1 ProteinModelPortal:Q81W00
PRIDE:Q81W00 EnsemblBacteria:EBBACT00000010061
EnsemblBacteria:EBBACT00000016654 EnsemblBacteria:EBBACT00000023776
GeneID:1087001 GeneID:2819709 GeneID:2849703 KEGG:ban:BA_0039
KEGG:bar:GBAA_0039 KEGG:bat:BAS0040 HOGENOM:HOG000227962
BioCyc:BANT260799:GJAJ-47-MONOMER BioCyc:BANT261594:GJ7F-48-MONOMER
Uniprot:Q81W00
Length = 292
Score = 118 (46.6 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 34/123 (27%), Positives = 58/123 (47%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRVHPIIDLPFK 60
+ A G ++ LSI Q + V+ T+P F+P+P VD ++ R P++++ +
Sbjct: 161 LAAKPGTKEYGSLSIAIQYYTEVETVMTVPRTVFVPQPNVDSAIIRLLKRPKPVVEVTDE 220
Query: 61 -LIERVVSCIFRYRQKQVYKPASLL---FPKRKRQLVVSLLERACVKPILRPYQLSVQEF 116
VV F R+K + S FPK K +L+ +L + P R LS++EF
Sbjct: 221 TFFFEVVRASFAQRRKTLMNNLSNNLNGFPKDK-ELLDRILTEVGIDPKRRGETLSIEEF 279
Query: 117 GQI 119
+
Sbjct: 280 ATL 282
>UNIPROTKB|Q9KUS2 [details] [associations]
symbol:rsmA "Ribosomal RNA small subunit methyltransferase
A" species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000154 "rRNA modification" evidence=ISS] [GO:0000179 "rRNA
(adenine-N6,N6-)-dimethyltransferase activity" evidence=ISS]
HAMAP:MF_00607 InterPro:IPR001737 InterPro:IPR011530
InterPro:IPR020596 InterPro:IPR020598 Pfam:PF00398 PROSITE:PS01131
SMART:SM00650 GO:GO:0005737 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0003723 eggNOG:COG0030 GO:GO:0000179 PANTHER:PTHR11727
TIGRFAMs:TIGR00755 Gene3D:1.10.8.100 InterPro:IPR023165 KO:K02528
OMA:PVPNVDS ProtClustDB:PRK00274 GO:GO:0052908 PIR:B82323
RefSeq:NP_230097.1 ProteinModelPortal:Q9KUS2 SMR:Q9KUS2
DNASU:2615775 GeneID:2615775 KEGG:vch:VC0443 PATRIC:20079965
Uniprot:Q9KUS2
Length = 271
Score = 110 (43.8 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 39/122 (31%), Positives = 57/122 (46%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G + RL++M Q +C V +P AF+P P+VD VV P HP L
Sbjct: 147 LAAGPGTKAYGRLTVMAQYYCKVVPVLEVPPSAFVPPPKVDSAVVRLVPYEDLPHPATSL 206
Query: 58 PFKLIERVVSCIFRYRQKQV---YKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQ 114
+ ++RVV F R+K V YK L P+ LE + P +RP L++
Sbjct: 207 EW--LDRVVREGFNQRRKTVRNCYK--GLAEPET--------LETLGINPGMRPENLTLA 254
Query: 115 EF 116
+F
Sbjct: 255 QF 256
>TIGR_CMR|VC_0443 [details] [associations]
symbol:VC_0443 "dimethyladenosine transferase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0000154 "rRNA modification"
evidence=ISS] [GO:0000179 "rRNA
(adenine-N6,N6-)-dimethyltransferase activity" evidence=ISS]
HAMAP:MF_00607 InterPro:IPR001737 InterPro:IPR011530
InterPro:IPR020596 InterPro:IPR020598 Pfam:PF00398 PROSITE:PS01131
SMART:SM00650 GO:GO:0005737 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0003723 eggNOG:COG0030 GO:GO:0000179 PANTHER:PTHR11727
TIGRFAMs:TIGR00755 Gene3D:1.10.8.100 InterPro:IPR023165 KO:K02528
OMA:PVPNVDS ProtClustDB:PRK00274 GO:GO:0052908 PIR:B82323
RefSeq:NP_230097.1 ProteinModelPortal:Q9KUS2 SMR:Q9KUS2
DNASU:2615775 GeneID:2615775 KEGG:vch:VC0443 PATRIC:20079965
Uniprot:Q9KUS2
Length = 271
Score = 110 (43.8 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 39/122 (31%), Positives = 57/122 (46%)
Query: 1 MIATEGMEQRCRLSIMCQNWCNVDHRFTIPGKAFIPKPQVDVGVVHFTPRV---HPIIDL 57
+ A G + RL++M Q +C V +P AF+P P+VD VV P HP L
Sbjct: 147 LAAGPGTKAYGRLTVMAQYYCKVVPVLEVPPSAFVPPPKVDSAVVRLVPYEDLPHPATSL 206
Query: 58 PFKLIERVVSCIFRYRQKQV---YKPASLLFPKRKRQLVVSLLERACVKPILRPYQLSVQ 114
+ ++RVV F R+K V YK L P+ LE + P +RP L++
Sbjct: 207 EW--LDRVVREGFNQRRKTVRNCYK--GLAEPET--------LETLGINPGMRPENLTLA 254
Query: 115 EF 116
+F
Sbjct: 255 QF 256
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.325 0.142 0.443 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 165 165 0.00093 107 3 11 22 0.47 31
30 0.45 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 19
No. of states in DFA: 594 (63 KB)
Total size of DFA: 163 KB (2097 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.39u 0.10s 17.49t Elapsed: 00:00:07
Total cpu time: 17.39u 0.10s 17.49t Elapsed: 00:00:07
Start: Thu Aug 15 14:49:23 2013 End: Thu Aug 15 14:49:30 2013