Query psy13720
Match_columns 487
No_of_seqs 321 out of 2085
Neff 7.6
Searched_HMMs 29240
Date Fri Aug 16 18:46:28 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13720.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13720hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3swr_A DNA (cytosine-5)-methyl 100.0 4E-101 1E-105 864.8 45.2 484 1-485 323-808 (1002)
2 3av4_A DNA (cytosine-5)-methyl 100.0 5.3E-94 1.8E-98 823.5 41.2 483 1-484 635-1118(1330)
3 4ft4_B DNA (cytosine-5)-methyl 100.0 4.1E-77 1.4E-81 670.2 36.7 423 2-483 47-567 (784)
4 3g7u_A Cytosine-specific methy 100.0 8E-50 2.7E-54 411.0 19.3 227 217-482 2-233 (376)
5 3ubt_Y Modification methylase 100.0 1.1E-48 3.6E-53 396.8 16.7 171 218-407 1-171 (331)
6 2c7p_A Modification methylase 100.0 2.3E-45 8E-50 371.2 18.7 177 216-412 10-188 (327)
7 4h0n_A DNMT2; SAH binding, tra 100.0 2.8E-43 9.6E-48 356.5 16.4 170 216-403 2-173 (333)
8 3qv2_A 5-cytosine DNA methyltr 100.0 7.2E-43 2.5E-47 352.4 16.1 176 215-412 8-190 (327)
9 1g55_A DNA cytosine methyltran 100.0 4.6E-41 1.6E-45 342.4 16.8 177 217-412 2-181 (343)
10 4dkj_A Cytosine-specific methy 100.0 1.7E-41 5.7E-46 350.6 12.4 190 216-412 9-248 (403)
11 3me5_A Cytosine-specific methy 100.0 4.7E-41 1.6E-45 354.0 15.2 183 216-403 87-292 (482)
12 2qrv_A DNA (cytosine-5)-methyl 100.0 3.4E-37 1.1E-41 306.6 10.9 162 215-401 14-184 (295)
13 2pv0_B DNA (cytosine-5)-methyl 100.0 5.3E-30 1.8E-34 257.9 6.9 147 215-412 187-340 (386)
14 2qrv_B DNA (cytosine-5)-methyl 100.0 6.6E-30 2.3E-34 241.3 6.1 146 216-412 32-184 (230)
15 1w4s_A Polybromo, polybromo 1 99.9 1E-27 3.5E-32 220.5 12.7 130 1-180 15-144 (174)
16 3swr_A DNA (cytosine-5)-methyl 99.9 5.1E-23 1.8E-27 231.9 15.0 129 1-180 147-283 (1002)
17 3av4_A DNA (cytosine-5)-methyl 99.9 4.2E-22 1.4E-26 229.4 13.8 129 1-180 458-595 (1330)
18 4dov_A ORC1, origin recognitio 99.7 2.9E-16 1E-20 138.8 17.0 129 2-179 23-161 (163)
19 2igt_A SAM dependent methyltra 98.8 3.4E-08 1.2E-12 99.5 14.9 160 216-397 153-323 (332)
20 2fl7_A Regulatory protein SIR3 98.8 2.8E-08 9.4E-13 93.2 9.9 121 8-177 48-189 (232)
21 1m4z_A Origin recognition comp 98.7 3.3E-08 1.1E-12 93.0 9.2 121 8-177 48-189 (238)
22 3c0k_A UPF0064 protein YCCW; P 98.3 5.3E-06 1.8E-10 85.3 13.4 138 216-374 220-365 (396)
23 1wy7_A Hypothetical protein PH 98.0 3.5E-05 1.2E-09 71.1 12.3 118 216-374 49-170 (207)
24 3cgg_A SAM-dependent methyltra 97.9 0.00022 7.4E-09 64.3 13.7 150 215-398 45-194 (195)
25 4dmg_A Putative uncharacterize 97.9 0.0001 3.6E-09 75.6 12.8 72 217-305 215-290 (393)
26 2frn_A Hypothetical protein PH 97.8 8.5E-05 2.9E-09 72.5 11.0 120 216-375 125-253 (278)
27 3ajd_A Putative methyltransfer 97.7 0.00012 4E-09 71.3 10.6 135 216-363 83-227 (274)
28 1ne2_A Hypothetical protein TA 97.7 0.00018 6.3E-09 65.9 10.5 74 216-309 51-124 (200)
29 2yxd_A Probable cobalt-precorr 97.7 0.00053 1.8E-08 61.1 12.8 120 216-382 35-160 (183)
30 3evz_A Methyltransferase; NYSG 97.6 0.00086 2.9E-08 62.6 14.4 156 215-399 54-220 (230)
31 2b78_A Hypothetical protein SM 97.6 0.00028 9.6E-09 72.1 11.7 81 216-309 212-299 (385)
32 3lpm_A Putative methyltransfer 97.6 0.00098 3.3E-08 63.9 14.7 161 216-400 49-220 (259)
33 2ift_A Putative methylase HI07 97.6 0.00015 5.1E-09 67.0 8.1 75 216-305 53-135 (201)
34 3gdh_A Trimethylguanosine synt 97.5 0.00012 4.2E-09 69.1 7.0 77 216-311 78-160 (241)
35 2as0_A Hypothetical protein PH 97.5 0.00068 2.3E-08 69.4 12.7 81 216-309 217-303 (396)
36 3p9n_A Possible methyltransfer 97.5 0.00025 8.4E-09 64.5 8.2 75 216-305 44-123 (189)
37 3k6r_A Putative transferase PH 97.5 0.00012 4E-09 71.7 6.3 129 216-383 125-262 (278)
38 2fpo_A Methylase YHHF; structu 97.5 0.00026 8.8E-09 65.4 8.4 73 216-304 54-131 (202)
39 3q87_B N6 adenine specific DNA 97.4 0.0022 7.4E-08 57.4 13.9 140 217-399 24-163 (170)
40 1wxx_A TT1595, hypothetical pr 97.4 0.0027 9.2E-08 64.6 14.9 135 216-373 209-350 (382)
41 3v97_A Ribosomal RNA large sub 97.3 0.00074 2.5E-08 74.4 10.5 79 216-310 539-624 (703)
42 3m6w_A RRNA methylase; rRNA me 97.2 0.0035 1.2E-07 65.5 13.7 83 216-313 101-188 (464)
43 2esr_A Methyltransferase; stru 97.1 0.00091 3.1E-08 59.8 7.7 74 216-305 31-110 (177)
44 1ws6_A Methyltransferase; stru 97.1 0.0011 3.8E-08 58.4 8.1 77 216-306 41-121 (171)
45 3bt7_A TRNA (uracil-5-)-methyl 97.1 0.00079 2.7E-08 68.3 7.2 86 218-306 215-306 (369)
46 3m4x_A NOL1/NOP2/SUN family pr 97.1 0.0037 1.3E-07 65.2 12.4 82 216-312 105-192 (456)
47 3e05_A Precorrin-6Y C5,15-meth 97.0 0.0074 2.5E-07 55.2 13.0 124 215-378 39-167 (204)
48 3axs_A Probable N(2),N(2)-dime 97.0 0.0013 4.3E-08 67.4 8.0 74 216-305 52-135 (392)
49 3a27_A TYW2, uncharacterized p 97.0 0.0034 1.1E-07 60.8 10.7 73 216-305 119-196 (272)
50 1ixk_A Methyltransferase; open 97.0 0.0037 1.2E-07 62.0 11.0 81 216-312 118-204 (315)
51 2fhp_A Methylase, putative; al 96.9 0.0021 7.2E-08 57.6 7.9 76 216-304 44-125 (187)
52 3e8s_A Putative SAM dependent 96.9 0.032 1.1E-06 51.1 16.2 75 216-305 52-126 (227)
53 3mti_A RRNA methylase; SAM-dep 96.9 0.0059 2E-07 54.7 10.7 73 216-305 22-99 (185)
54 1y8c_A S-adenosylmethionine-de 96.9 0.015 5.3E-07 54.1 13.9 69 216-303 37-109 (246)
55 3pfg_A N-methyltransferase; N, 96.9 0.016 5.6E-07 55.0 14.3 69 216-303 50-118 (263)
56 1iy9_A Spermidine synthase; ro 96.8 0.047 1.6E-06 52.8 17.5 150 216-399 75-236 (275)
57 1yzh_A TRNA (guanine-N(7)-)-me 96.8 0.0098 3.4E-07 54.9 12.0 134 217-378 42-181 (214)
58 1l3i_A Precorrin-6Y methyltran 96.8 0.013 4.6E-07 52.1 12.6 122 215-378 32-159 (192)
59 2dul_A N(2),N(2)-dimethylguano 96.8 0.0033 1.1E-07 64.1 8.9 75 216-306 47-142 (378)
60 1inl_A Spermidine synthase; be 96.8 0.037 1.3E-06 54.2 16.2 152 217-399 91-252 (296)
61 2b9e_A NOL1/NOP2/SUN domain fa 96.7 0.0021 7.2E-08 63.6 6.9 85 216-313 102-192 (309)
62 3hnr_A Probable methyltransfer 96.7 0.023 8E-07 52.1 13.7 69 216-303 45-114 (220)
63 3eey_A Putative rRNA methylase 96.7 0.016 5.4E-07 52.5 12.2 76 215-305 21-103 (197)
64 3m33_A Uncharacterized protein 96.7 0.0039 1.3E-07 58.2 8.2 115 216-374 48-162 (226)
65 3tm4_A TRNA (guanine N2-)-meth 96.7 0.0092 3.2E-07 60.5 11.4 126 215-375 216-348 (373)
66 1uwv_A 23S rRNA (uracil-5-)-me 96.7 0.0091 3.1E-07 61.8 11.4 119 216-375 286-410 (433)
67 3h2b_A SAM-dependent methyltra 96.7 0.027 9.4E-07 51.0 13.5 145 217-399 42-195 (203)
68 3e23_A Uncharacterized protein 96.6 0.046 1.6E-06 49.9 15.0 148 216-397 43-200 (211)
69 2yx1_A Hypothetical protein MJ 96.6 0.002 6.9E-08 64.4 6.1 68 216-305 195-268 (336)
70 3njr_A Precorrin-6Y methylase; 96.6 0.018 6.1E-07 53.0 12.0 116 216-376 55-177 (204)
71 2frx_A Hypothetical protein YE 96.6 0.014 4.8E-07 61.3 12.6 82 216-312 117-204 (479)
72 3grz_A L11 mtase, ribosomal pr 96.6 0.005 1.7E-07 56.3 8.1 116 216-377 60-183 (205)
73 1nv8_A HEMK protein; class I a 96.6 0.0033 1.1E-07 61.4 6.9 76 216-310 123-207 (284)
74 2jjq_A Uncharacterized RNA met 96.6 0.0043 1.5E-07 64.2 8.0 70 216-305 290-363 (425)
75 2yxl_A PH0851 protein, 450AA l 96.5 0.011 3.8E-07 61.4 11.0 83 216-313 259-348 (450)
76 1sqg_A SUN protein, FMU protei 96.5 0.0097 3.3E-07 61.5 10.2 84 216-313 246-333 (429)
77 3lcc_A Putative methyl chlorid 96.5 0.029 9.9E-07 52.3 12.6 149 217-397 67-225 (235)
78 4dzr_A Protein-(glutamine-N5) 96.4 0.0023 7.8E-08 58.5 4.7 84 215-310 29-116 (215)
79 2f8l_A Hypothetical protein LM 96.4 0.016 5.5E-07 57.9 10.9 156 216-394 130-301 (344)
80 2ozv_A Hypothetical protein AT 96.4 0.0047 1.6E-07 59.3 6.6 84 216-308 36-128 (260)
81 2b3t_A Protein methyltransfera 96.4 0.005 1.7E-07 59.4 6.8 77 216-310 109-191 (276)
82 2ih2_A Modification methylase 96.3 0.02 6.8E-07 58.5 11.5 154 217-399 40-211 (421)
83 2fca_A TRNA (guanine-N(7)-)-me 96.3 0.068 2.3E-06 49.3 13.8 132 216-375 38-175 (213)
84 3dtn_A Putative methyltransfer 96.2 0.034 1.2E-06 51.6 11.6 147 216-400 44-227 (234)
85 2pt6_A Spermidine synthase; tr 96.2 0.18 6.2E-06 49.8 17.2 151 216-399 116-277 (321)
86 1xdz_A Methyltransferase GIDB; 96.2 0.082 2.8E-06 49.5 14.0 149 216-407 70-227 (240)
87 2ex4_A Adrenal gland protein A 96.1 0.073 2.5E-06 49.7 13.3 132 216-377 79-223 (241)
88 3d2l_A SAM-dependent methyltra 96.1 0.15 5.1E-06 47.2 15.1 68 216-303 33-104 (243)
89 3tma_A Methyltransferase; thum 96.0 0.0057 2E-07 61.4 5.4 74 216-305 203-282 (354)
90 3ll7_A Putative methyltransfer 96.0 0.0057 2E-07 62.8 5.4 75 217-307 94-175 (410)
91 1fbn_A MJ fibrillarin homologu 96.0 0.1 3.4E-06 48.6 13.7 147 216-399 74-228 (230)
92 3bwc_A Spermidine synthase; SA 96.0 0.13 4.4E-06 50.4 15.0 153 216-399 95-258 (304)
93 1g8a_A Fibrillarin-like PRE-rR 96.0 0.14 4.6E-06 47.3 14.5 76 216-304 73-152 (227)
94 2qm3_A Predicted methyltransfe 95.9 0.048 1.6E-06 55.1 11.9 131 216-382 172-312 (373)
95 1xtp_A LMAJ004091AAA; SGPP, st 95.9 0.063 2.2E-06 50.3 11.9 148 216-396 93-252 (254)
96 2h1r_A Dimethyladenosine trans 95.9 0.0053 1.8E-07 60.3 4.4 71 216-306 42-117 (299)
97 1zx0_A Guanidinoacetate N-meth 95.9 0.059 2E-06 50.3 11.5 71 216-301 60-134 (236)
98 2oo3_A Protein involved in cat 95.8 0.01 3.5E-07 57.6 6.0 75 216-304 91-168 (283)
99 3dmg_A Probable ribosomal RNA 95.8 0.0092 3.1E-07 60.8 6.0 73 216-306 233-309 (381)
100 2ipx_A RRNA 2'-O-methyltransfe 95.8 0.067 2.3E-06 49.8 11.4 148 215-398 76-231 (233)
101 2oyr_A UPF0341 protein YHIQ; a 95.8 0.009 3.1E-07 57.5 5.4 71 218-305 90-174 (258)
102 2nxc_A L11 mtase, ribosomal pr 95.8 0.036 1.2E-06 52.8 9.6 119 216-377 120-242 (254)
103 2vdv_E TRNA (guanine-N(7)-)-me 95.7 0.021 7.2E-07 54.0 7.8 81 215-308 48-141 (246)
104 4fzv_A Putative methyltransfer 95.7 0.017 5.9E-07 58.3 7.5 79 215-308 147-236 (359)
105 1qam_A ERMC' methyltransferase 95.7 0.019 6.4E-07 54.6 7.4 54 216-271 30-86 (244)
106 1m6y_A S-adenosyl-methyltransf 95.7 0.026 8.8E-07 55.6 8.3 80 216-306 26-109 (301)
107 1o54_A SAM-dependent O-methylt 95.6 0.032 1.1E-06 53.6 8.7 117 215-374 111-234 (277)
108 2r6z_A UPF0341 protein in RSP 95.6 0.02 6.9E-07 55.0 7.1 76 216-305 83-171 (258)
109 2pxx_A Uncharacterized protein 95.6 0.02 6.7E-07 52.1 6.8 74 215-305 41-117 (215)
110 3jwh_A HEN1; methyltransferase 95.6 0.072 2.5E-06 48.8 10.7 46 216-261 29-74 (217)
111 1o9g_A RRNA methyltransferase; 95.6 0.025 8.6E-07 53.4 7.5 45 216-260 51-97 (250)
112 1yb2_A Hypothetical protein TA 95.6 0.067 2.3E-06 51.4 10.7 127 215-384 109-243 (275)
113 2i7c_A Spermidine synthase; tr 95.5 0.48 1.6E-05 45.7 16.7 153 216-399 78-239 (283)
114 3dxy_A TRNA (guanine-N(7)-)-me 95.5 0.046 1.6E-06 50.9 9.0 78 216-306 34-116 (218)
115 3g89_A Ribosomal RNA small sub 95.5 0.13 4.5E-06 48.8 12.3 150 216-407 80-237 (249)
116 2h00_A Methyltransferase 10 do 95.5 0.018 6.3E-07 54.4 6.2 80 216-309 65-154 (254)
117 2qfm_A Spermine synthase; sper 95.4 0.032 1.1E-06 56.2 8.1 77 216-305 188-277 (364)
118 3g5l_A Putative S-adenosylmeth 95.4 0.097 3.3E-06 49.1 11.2 71 216-303 44-116 (253)
119 3sm3_A SAM-dependent methyltra 95.4 0.19 6.4E-06 46.1 13.0 46 215-262 29-74 (235)
120 3dh0_A SAM dependent methyltra 95.4 0.15 5.2E-06 46.5 12.2 131 215-376 36-178 (219)
121 3fut_A Dimethyladenosine trans 95.4 0.011 3.7E-07 57.4 4.4 72 215-304 46-119 (271)
122 3jwg_A HEN1, methyltransferase 95.4 0.074 2.5E-06 48.8 10.0 46 216-261 29-74 (219)
123 3k0b_A Predicted N6-adenine-sp 95.4 0.021 7.3E-07 58.3 6.8 73 216-305 201-317 (393)
124 3mb5_A SAM-dependent methyltra 95.4 0.043 1.5E-06 51.7 8.5 115 215-372 92-215 (255)
125 3adn_A Spermidine synthase; am 95.4 0.17 5.9E-06 49.4 13.0 152 216-399 83-245 (294)
126 3tqs_A Ribosomal RNA small sub 95.4 0.016 5.6E-07 55.6 5.4 55 216-272 29-86 (255)
127 1mjf_A Spermidine synthase; sp 95.3 0.024 8.2E-07 55.0 6.6 149 216-399 75-239 (281)
128 1zq9_A Probable dimethyladenos 95.2 0.014 4.9E-07 56.8 4.7 72 216-307 28-105 (285)
129 3m70_A Tellurite resistance pr 95.2 0.028 9.5E-07 54.1 6.7 72 216-306 120-195 (286)
130 3ldu_A Putative methylase; str 95.1 0.018 6.1E-07 58.7 5.2 72 216-304 195-310 (385)
131 1vbf_A 231AA long hypothetical 95.0 0.028 9.6E-07 52.1 5.9 73 216-306 70-145 (231)
132 1dus_A MJ0882; hypothetical pr 95.0 0.039 1.3E-06 49.0 6.5 71 216-305 52-129 (194)
133 4dcm_A Ribosomal RNA large sub 94.9 0.017 5.7E-07 58.7 4.4 74 216-306 222-303 (375)
134 3ldg_A Putative uncharacterize 94.9 0.03 1E-06 57.0 6.3 73 216-305 194-310 (384)
135 3lbf_A Protein-L-isoaspartate 94.9 0.042 1.4E-06 50.1 6.7 73 215-305 76-153 (210)
136 1ve3_A Hypothetical protein PH 94.9 0.042 1.4E-06 50.5 6.6 70 217-304 39-112 (227)
137 3tfw_A Putative O-methyltransf 94.8 0.061 2.1E-06 50.9 7.8 101 215-348 62-172 (248)
138 3gru_A Dimethyladenosine trans 94.7 0.018 6.3E-07 56.4 3.9 72 216-305 50-124 (295)
139 3duw_A OMT, O-methyltransferas 94.7 0.15 5E-06 46.9 9.9 102 216-348 58-169 (223)
140 2pwy_A TRNA (adenine-N(1)-)-me 94.6 0.11 3.8E-06 48.7 9.0 117 215-373 95-218 (258)
141 3r0q_C Probable protein argini 94.5 0.085 2.9E-06 53.3 8.5 69 216-303 63-137 (376)
142 3ftd_A Dimethyladenosine trans 94.5 0.033 1.1E-06 53.1 5.0 55 216-272 31-87 (249)
143 3hm2_A Precorrin-6Y C5,15-meth 94.5 0.31 1.1E-05 42.6 11.2 120 216-376 25-150 (178)
144 4df3_A Fibrillarin-like rRNA/T 94.5 0.41 1.4E-05 45.1 12.4 150 213-397 74-230 (233)
145 2o07_A Spermidine synthase; st 94.4 0.1 3.5E-06 51.2 8.5 153 216-399 95-256 (304)
146 3bxo_A N,N-dimethyltransferase 94.4 0.069 2.4E-06 49.4 6.9 54 216-271 40-93 (239)
147 3id6_C Fibrillarin-like rRNA/T 94.4 0.51 1.7E-05 44.4 12.9 150 214-399 74-231 (232)
148 1i1n_A Protein-L-isoaspartate 94.3 0.07 2.4E-06 49.2 6.7 74 216-305 77-161 (226)
149 2gb4_A Thiopurine S-methyltran 94.2 0.062 2.1E-06 51.2 6.3 43 216-260 68-110 (252)
150 3kkz_A Uncharacterized protein 94.2 0.067 2.3E-06 50.8 6.4 75 214-306 44-125 (267)
151 1uir_A Polyamine aminopropyltr 94.1 0.14 4.9E-06 50.3 8.8 154 216-399 77-242 (314)
152 3tr6_A O-methyltransferase; ce 94.0 0.29 9.9E-06 44.9 10.4 77 216-304 64-149 (225)
153 3ofk_A Nodulation protein S; N 94.0 0.073 2.5E-06 48.6 6.1 68 216-302 51-121 (216)
154 1wzn_A SAM-dependent methyltra 93.9 0.099 3.4E-06 49.0 7.0 54 216-271 41-98 (252)
155 2p35_A Trans-aconitate 2-methy 93.9 0.11 3.7E-06 48.8 7.3 70 216-304 33-104 (259)
156 3ntv_A MW1564 protein; rossman 93.9 0.098 3.3E-06 48.8 6.8 57 216-272 71-133 (232)
157 4gek_A TRNA (CMO5U34)-methyltr 93.8 0.27 9.1E-06 47.0 9.9 43 215-259 69-115 (261)
158 3bkw_A MLL3908 protein, S-aden 93.8 0.13 4.4E-06 47.7 7.5 72 216-304 43-116 (243)
159 1xj5_A Spermidine synthase 1; 93.8 0.19 6.3E-06 50.1 8.9 75 216-304 120-203 (334)
160 1ri5_A MRNA capping enzyme; me 93.7 0.062 2.1E-06 51.6 5.3 45 216-261 64-108 (298)
161 3ccf_A Cyclopropane-fatty-acyl 93.7 0.16 5.6E-06 48.4 8.3 69 216-303 57-125 (279)
162 3iv6_A Putative Zn-dependent a 93.7 0.12 4E-06 49.7 7.1 47 215-263 44-90 (261)
163 1ej0_A FTSJ; methyltransferase 93.7 0.21 7.1E-06 43.2 8.3 80 216-309 22-102 (180)
164 3l8d_A Methyltransferase; stru 93.6 0.093 3.2E-06 48.7 6.0 69 216-302 53-123 (242)
165 2xvm_A Tellurite resistance pr 93.6 0.13 4.4E-06 46.0 6.8 70 216-304 32-106 (199)
166 2b2c_A Spermidine synthase; be 93.5 0.24 8.1E-06 48.9 9.1 148 216-399 108-269 (314)
167 1nt2_A Fibrillarin-like PRE-rR 93.5 1.4 4.7E-05 40.3 13.8 74 216-302 57-133 (210)
168 3dli_A Methyltransferase; PSI- 93.4 0.18 6.2E-06 46.9 7.8 69 215-302 40-108 (240)
169 2gs9_A Hypothetical protein TT 93.4 0.13 4.4E-06 46.7 6.6 67 216-302 36-102 (211)
170 2okc_A Type I restriction enzy 93.4 0.68 2.3E-05 47.7 12.8 77 216-310 171-268 (445)
171 2gpy_A O-methyltransferase; st 93.3 0.15 5.3E-06 47.2 7.1 77 216-305 54-136 (233)
172 1dl5_A Protein-L-isoaspartate 93.3 0.1 3.5E-06 51.3 6.1 77 216-308 75-157 (317)
173 2p7i_A Hypothetical protein; p 93.3 0.15 5.1E-06 47.2 6.9 68 216-302 42-110 (250)
174 2avd_A Catechol-O-methyltransf 93.2 0.18 6.1E-06 46.5 7.3 79 216-304 69-154 (229)
175 2yvl_A TRMI protein, hypotheti 93.2 0.13 4.5E-06 47.9 6.5 43 216-260 91-133 (248)
176 2pbf_A Protein-L-isoaspartate 93.2 0.098 3.4E-06 48.3 5.5 79 216-306 80-173 (227)
177 3i9f_A Putative type 11 methyl 93.2 0.15 5.2E-06 44.5 6.5 53 215-269 16-68 (170)
178 4azs_A Methyltransferase WBDD; 93.2 0.14 5E-06 54.6 7.5 59 215-275 65-128 (569)
179 3ckk_A TRNA (guanine-N(7)-)-me 93.2 0.55 1.9E-05 44.0 10.7 130 215-370 45-185 (235)
180 2kw5_A SLR1183 protein; struct 93.1 0.11 3.7E-06 46.9 5.5 146 216-397 30-191 (202)
181 3u81_A Catechol O-methyltransf 93.1 0.16 5.3E-06 46.9 6.7 105 216-348 58-172 (221)
182 3ou2_A SAM-dependent methyltra 93.1 0.15 5.2E-06 46.3 6.5 68 216-302 46-114 (218)
183 3f4k_A Putative methyltransfer 93.0 0.095 3.2E-06 49.2 5.1 73 214-304 44-123 (257)
184 3dr5_A Putative O-methyltransf 93.0 0.16 5.5E-06 47.2 6.6 72 217-302 57-136 (221)
185 2zig_A TTHA0409, putative modi 92.9 0.11 3.8E-06 50.7 5.6 43 216-260 235-277 (297)
186 4htf_A S-adenosylmethionine-de 92.9 0.13 4.5E-06 49.2 6.1 71 216-303 68-144 (285)
187 2y1w_A Histone-arginine methyl 92.8 0.19 6.4E-06 50.2 7.3 70 216-304 50-125 (348)
188 3ujc_A Phosphoethanolamine N-m 92.8 0.18 6.2E-06 47.3 6.8 71 215-303 54-128 (266)
189 3mgg_A Methyltransferase; NYSG 92.8 0.21 7.1E-06 47.5 7.3 74 215-304 36-114 (276)
190 3g5t_A Trans-aconitate 3-methy 92.8 0.15 5.1E-06 49.3 6.3 56 216-272 36-100 (299)
191 2fyt_A Protein arginine N-meth 92.7 0.14 4.8E-06 50.9 6.2 70 216-303 64-139 (340)
192 2yqz_A Hypothetical protein TT 92.6 0.18 6E-06 47.3 6.5 70 215-303 38-112 (263)
193 3q7e_A Protein arginine N-meth 92.5 0.22 7.4E-06 49.8 7.2 71 216-304 66-142 (349)
194 2i62_A Nicotinamide N-methyltr 92.5 0.73 2.5E-05 43.0 10.6 46 216-262 56-101 (265)
195 3b3j_A Histone-arginine methyl 92.4 0.17 5.8E-06 53.0 6.6 70 216-304 158-233 (480)
196 1xxl_A YCGJ protein; structura 92.4 0.19 6.4E-06 46.9 6.2 70 215-303 20-95 (239)
197 1i9g_A Hypothetical protein RV 92.3 0.26 8.8E-06 47.0 7.2 116 215-372 98-223 (280)
198 3uzu_A Ribosomal RNA small sub 92.3 0.11 3.8E-06 50.4 4.6 56 216-272 42-101 (279)
199 2ar0_A M.ecoki, type I restric 92.2 1.5 5E-05 46.6 13.6 80 216-310 169-276 (541)
200 2b25_A Hypothetical protein; s 92.2 0.1 3.5E-06 51.6 4.4 46 215-260 104-150 (336)
201 2yxe_A Protein-L-isoaspartate 92.1 0.16 5.5E-06 46.3 5.3 75 216-306 77-157 (215)
202 3uwp_A Histone-lysine N-methyl 92.1 0.14 4.9E-06 52.4 5.3 105 214-349 171-292 (438)
203 3ocj_A Putative exported prote 92.1 0.2 6.7E-06 48.7 6.2 71 215-303 117-195 (305)
204 1g6q_1 HnRNP arginine N-methyl 92.0 0.2 6.9E-06 49.5 6.3 71 216-304 38-114 (328)
205 3c3p_A Methyltransferase; NP_9 92.0 0.28 9.5E-06 44.6 6.8 56 216-273 56-120 (210)
206 2avn_A Ubiquinone/menaquinone 91.9 0.31 1E-05 46.0 7.2 52 216-270 54-105 (260)
207 3hem_A Cyclopropane-fatty-acyl 91.8 0.64 2.2E-05 44.8 9.6 44 215-260 71-115 (302)
208 3gjy_A Spermidine synthase; AP 91.7 0.47 1.6E-05 46.8 8.4 124 216-369 89-219 (317)
209 2pjd_A Ribosomal RNA small sub 91.7 0.15 5.1E-06 50.7 4.9 72 217-306 197-272 (343)
210 3bzb_A Uncharacterized protein 91.6 0.24 8.1E-06 47.7 6.2 44 216-260 79-123 (281)
211 3thr_A Glycine N-methyltransfe 91.6 0.27 9.2E-06 47.1 6.5 42 216-259 57-98 (293)
212 1jsx_A Glucose-inhibited divis 91.6 0.31 1E-05 44.0 6.5 42 217-259 66-108 (207)
213 1r18_A Protein-L-isoaspartate( 91.6 0.16 5.5E-06 46.9 4.7 75 216-306 84-174 (227)
214 4hc4_A Protein arginine N-meth 91.5 0.3 1E-05 49.4 6.9 67 217-301 84-155 (376)
215 3g2m_A PCZA361.24; SAM-depende 91.5 0.13 4.4E-06 49.8 4.1 41 219-261 85-125 (299)
216 3ggd_A SAM-dependent methyltra 91.5 0.2 6.8E-06 46.7 5.3 57 215-273 55-113 (245)
217 1g60_A Adenine-specific methyl 91.4 0.22 7.6E-06 47.5 5.5 43 216-260 212-254 (260)
218 3ege_A Putative methyltransfer 91.3 0.34 1.2E-05 45.8 6.8 101 215-348 33-133 (261)
219 1jg1_A PIMT;, protein-L-isoasp 91.2 0.19 6.4E-06 46.8 4.8 73 216-305 91-168 (235)
220 1pjz_A Thiopurine S-methyltran 91.2 0.31 1.1E-05 44.4 6.2 42 216-259 22-63 (203)
221 3vc1_A Geranyl diphosphate 2-C 91.1 0.26 8.8E-06 48.0 5.9 44 214-259 115-159 (312)
222 3dlc_A Putative S-adenosyl-L-m 91.0 0.25 8.7E-06 44.6 5.3 69 219-304 46-120 (219)
223 3gu3_A Methyltransferase; alph 90.9 0.26 9E-06 47.3 5.6 70 215-303 21-97 (284)
224 3v97_A Ribosomal RNA large sub 90.8 0.38 1.3E-05 52.8 7.4 101 216-339 190-339 (703)
225 1yub_A Ermam, rRNA methyltrans 90.5 0.022 7.5E-07 53.9 -2.4 54 216-271 29-85 (245)
226 2hnk_A SAM-dependent O-methylt 90.5 0.71 2.4E-05 42.9 8.1 59 216-274 60-125 (239)
227 1nkv_A Hypothetical protein YJ 90.2 0.44 1.5E-05 44.5 6.4 44 215-260 35-79 (256)
228 1p91_A Ribosomal RNA large sub 90.1 0.42 1.4E-05 45.1 6.2 54 216-271 85-140 (269)
229 3bgv_A MRNA CAP guanine-N7 met 90.1 0.25 8.5E-06 48.1 4.7 44 216-260 34-77 (313)
230 3cc8_A Putative methyltransfer 89.9 0.61 2.1E-05 42.4 7.0 51 216-270 32-82 (230)
231 1vl5_A Unknown conserved prote 89.9 0.54 1.9E-05 44.1 6.8 70 216-304 37-112 (260)
232 3s1s_A Restriction endonucleas 89.7 0.27 9.3E-06 54.3 5.0 45 216-260 321-370 (878)
233 3kr9_A SAM-dependent methyltra 89.7 0.43 1.5E-05 44.7 5.7 45 216-260 15-59 (225)
234 3lec_A NADB-rossmann superfami 89.4 0.47 1.6E-05 44.6 5.8 45 216-260 21-65 (230)
235 3dou_A Ribosomal RNA large sub 89.4 0.22 7.6E-06 45.1 3.5 50 215-272 24-73 (191)
236 1sui_A Caffeoyl-COA O-methyltr 89.3 0.52 1.8E-05 44.4 6.2 57 216-274 79-144 (247)
237 3gnl_A Uncharacterized protein 89.3 0.46 1.6E-05 45.1 5.7 45 216-260 21-65 (244)
238 3c3y_A Pfomt, O-methyltransfer 89.2 0.6 2E-05 43.6 6.5 77 216-303 70-155 (237)
239 3cbg_A O-methyltransferase; cy 89.0 0.55 1.9E-05 43.6 6.1 59 216-274 72-137 (232)
240 3lkd_A Type I restriction-modi 88.7 0.49 1.7E-05 50.2 6.1 77 216-306 221-308 (542)
241 2o57_A Putative sarcosine dime 88.5 0.54 1.8E-05 45.1 5.7 43 215-259 81-124 (297)
242 2fk8_A Methoxy mycolic acid sy 87.8 0.89 3E-05 44.1 6.9 44 215-260 89-133 (318)
243 1kpg_A CFA synthase;, cyclopro 87.7 1.2 4E-05 42.4 7.6 44 215-260 63-107 (287)
244 2p8j_A S-adenosylmethionine-de 87.4 0.83 2.8E-05 41.0 6.0 70 216-303 23-97 (209)
245 4hg2_A Methyltransferase type 87.4 0.32 1.1E-05 46.4 3.3 67 217-302 40-106 (257)
246 3htx_A HEN1; HEN1, small RNA m 87.1 0.63 2.2E-05 51.7 5.7 43 216-258 721-764 (950)
247 3r3h_A O-methyltransferase, SA 86.9 0.21 7.2E-06 47.0 1.6 79 216-304 60-145 (242)
248 2plw_A Ribosomal RNA methyltra 86.7 0.67 2.3E-05 41.5 4.9 50 216-272 22-74 (201)
249 2cmg_A Spermidine synthase; tr 86.4 0.61 2.1E-05 44.6 4.6 135 217-399 73-216 (262)
250 1boo_A Protein (N-4 cytosine-s 86.3 1.1 3.6E-05 44.2 6.5 47 216-264 252-298 (323)
251 3khk_A Type I restriction-modi 86.3 12 0.00042 39.4 15.2 41 219-259 247-302 (544)
252 3fzg_A 16S rRNA methylase; met 85.9 1.2 4.2E-05 40.6 6.1 46 215-260 48-93 (200)
253 2r3s_A Uncharacterized protein 85.4 5.5 0.00019 38.6 11.2 42 215-259 164-207 (335)
254 3mq2_A 16S rRNA methyltransfer 85.2 0.34 1.2E-05 44.2 2.2 40 216-255 27-66 (218)
255 3opn_A Putative hemolysin; str 85.2 0.39 1.3E-05 45.0 2.6 46 216-262 37-82 (232)
256 1qyr_A KSGA, high level kasuga 84.8 0.89 3E-05 43.2 4.9 54 216-272 21-78 (252)
257 3bus_A REBM, methyltransferase 84.4 1.9 6.6E-05 40.4 7.2 43 215-259 60-103 (273)
258 1wg8_A Predicted S-adenosylmet 84.1 2.6 9.1E-05 40.7 7.9 54 217-273 23-78 (285)
259 2vdw_A Vaccinia virus capping 83.5 1.3 4.5E-05 43.1 5.6 43 216-259 48-90 (302)
260 2zfu_A Nucleomethylin, cerebra 83.3 6.2 0.00021 35.4 9.9 124 216-400 67-192 (215)
261 4fsd_A Arsenic methyltransfera 83.0 1.7 5.8E-05 43.6 6.4 79 215-303 82-174 (383)
262 3orh_A Guanidinoacetate N-meth 83.0 1.8 6.3E-05 40.1 6.2 57 216-273 60-120 (236)
263 2oxt_A Nucleoside-2'-O-methylt 82.4 0.15 5.1E-06 49.0 -1.7 34 215-251 73-106 (265)
264 1vlm_A SAM-dependent methyltra 82.3 1.1 3.9E-05 40.7 4.4 46 217-270 48-93 (219)
265 2wa2_A Non-structural protein 82.0 0.25 8.5E-06 47.8 -0.3 34 215-251 81-114 (276)
266 1u2z_A Histone-lysine N-methyl 81.7 2.1 7.2E-05 44.0 6.5 42 214-256 240-282 (433)
267 1eg2_A Modification methylase 81.0 1.6 5.5E-05 42.9 5.2 45 216-262 242-289 (319)
268 1x19_A CRTF-related protein; m 80.8 19 0.00065 35.2 13.2 44 215-259 189-232 (359)
269 2xyq_A Putative 2'-O-methyl tr 79.7 5.1 0.00017 38.8 8.2 66 214-305 61-133 (290)
270 3g07_A 7SK snRNA methylphospha 79.0 2.6 8.9E-05 40.4 5.9 45 216-261 46-91 (292)
271 3fpf_A Mtnas, putative unchara 78.9 2.5 8.6E-05 41.2 5.7 56 214-271 120-182 (298)
272 3lcv_B Sisomicin-gentamicin re 73.8 2.3 7.9E-05 40.8 3.8 45 216-260 132-176 (281)
273 3hp7_A Hemolysin, putative; st 72.8 1.7 5.8E-05 42.2 2.6 47 216-263 85-131 (291)
274 1i4w_A Mitochondrial replicati 72.3 5.1 0.00017 39.9 6.1 57 217-273 59-117 (353)
275 2nyu_A Putative ribosomal RNA 72.0 2.9 9.8E-05 36.9 3.8 51 216-272 22-82 (196)
276 2a14_A Indolethylamine N-methy 71.8 2.1 7.1E-05 40.4 3.0 43 216-259 55-97 (263)
277 4auk_A Ribosomal RNA large sub 71.2 3.2 0.00011 41.7 4.2 143 214-398 209-354 (375)
278 3frh_A 16S rRNA methylase; met 70.6 6.4 0.00022 37.2 5.9 42 216-260 105-146 (253)
279 3ufb_A Type I restriction-modi 67.2 6.4 0.00022 41.4 5.8 43 217-259 218-273 (530)
280 2bm8_A Cephalosporin hydroxyla 67.1 1.5 5.1E-05 40.9 0.8 56 216-271 81-140 (236)
281 3p2e_A 16S rRNA methylase; met 64.8 3.4 0.00012 38.1 2.8 38 216-253 24-61 (225)
282 3ua3_A Protein arginine N-meth 63.3 7.2 0.00025 42.5 5.2 57 217-273 410-484 (745)
283 2dpm_A M.dpnii 1, protein (ade 60.7 7.5 0.00026 37.4 4.5 37 218-258 37-73 (284)
284 4gqb_A Protein arginine N-meth 59.4 4.5 0.00016 43.6 2.9 69 216-301 357-434 (637)
285 3c6k_A Spermine synthase; sper 57.5 1.6E+02 0.0054 29.4 16.3 157 217-399 206-378 (381)
286 1af7_A Chemotaxis receptor met 55.8 12 0.00042 35.7 5.0 44 216-259 105-156 (274)
287 3bkx_A SAM-dependent methyltra 55.5 6.9 0.00023 36.5 3.2 37 215-251 42-79 (275)
288 2g72_A Phenylethanolamine N-me 55.2 7.8 0.00027 36.7 3.6 44 216-260 71-114 (289)
289 2g1p_A DNA adenine methylase; 54.0 9.1 0.00031 36.7 3.8 37 218-258 29-65 (278)
290 4e2x_A TCAB9; kijanose, tetron 53.6 14 0.00048 37.0 5.3 43 215-259 106-148 (416)
291 2p41_A Type II methyltransfera 51.9 9.5 0.00032 37.0 3.6 31 215-248 81-111 (305)
292 1qzz_A RDMB, aclacinomycin-10- 47.9 25 0.00085 34.4 6.0 45 215-260 181-225 (374)
293 2ip2_A Probable phenazine-spec 47.7 16 0.00054 35.3 4.5 42 218-260 169-210 (334)
294 1yf3_A DNA adenine methylase; 44.7 9.9 0.00034 36.0 2.4 38 218-260 26-63 (259)
295 2lci_A Protein OR36; structura 44.3 50 0.0017 26.0 5.9 48 324-377 61-108 (134)
296 1tw3_A COMT, carminomycin 4-O- 43.9 23 0.00078 34.5 5.0 44 215-259 182-225 (360)
297 2qe6_A Uncharacterized protein 43.4 22 0.00074 33.6 4.6 53 218-272 79-139 (274)
298 3tka_A Ribosomal RNA small sub 43.3 33 0.0011 33.9 5.9 57 216-273 57-116 (347)
299 3u3x_A Oxidoreductase; structu 43.1 83 0.0029 30.7 9.1 61 212-274 21-84 (361)
300 3dp7_A SAM-dependent methyltra 41.2 33 0.0011 33.6 5.7 45 216-261 179-223 (363)
301 2k4m_A TR8_protein, UPF0146 pr 39.8 15 0.00051 31.9 2.4 37 216-254 35-73 (153)
302 3gwz_A MMCR; methyltransferase 38.0 56 0.0019 32.0 6.9 129 215-376 201-353 (369)
303 3gcz_A Polyprotein; flavivirus 37.9 21 0.0007 34.3 3.4 38 213-251 87-125 (282)
304 4gqa_A NAD binding oxidoreduct 37.4 42 0.0014 33.5 5.9 60 211-274 20-92 (412)
305 3evf_A RNA-directed RNA polyme 34.1 26 0.00088 33.5 3.4 36 213-249 71-107 (277)
306 1x87_A Urocanase protein; stru 33.9 57 0.002 33.6 6.0 53 222-277 165-221 (551)
307 1uwk_A Urocanate hydratase; hy 33.8 55 0.0019 33.8 5.8 52 222-276 170-225 (557)
308 2fkn_A Urocanate hydratase; ro 33.6 55 0.0019 33.7 5.8 53 222-277 166-222 (552)
309 3mcz_A O-methyltransferase; ad 32.7 23 0.0008 34.3 3.0 42 217-259 180-221 (352)
310 3ged_A Short-chain dehydrogena 31.0 16 0.00056 34.2 1.4 40 231-272 19-58 (247)
311 4had_A Probable oxidoreductase 30.3 77 0.0026 30.6 6.3 56 215-274 21-82 (350)
312 3sso_A Methyltransferase; macr 30.0 18 0.0006 36.8 1.5 54 216-273 216-276 (419)
313 2ld4_A Anamorsin; methyltransf 29.5 2.5E+02 0.0085 23.5 9.7 120 215-379 11-135 (176)
314 1gtf_A Trp RNA-binding attenua 27.9 71 0.0024 23.4 4.0 49 95-145 17-65 (74)
315 3o4f_A Spermidine synthase; am 26.0 4.3E+02 0.015 25.1 15.2 152 216-399 83-245 (294)
316 4fb5_A Probable oxidoreductase 26.0 71 0.0024 31.0 5.2 57 213-274 22-90 (393)
317 3p8z_A Mtase, non-structural p 24.8 49 0.0017 31.1 3.4 38 213-251 75-113 (267)
318 2aot_A HMT, histamine N-methyl 24.2 82 0.0028 29.5 5.1 43 216-259 52-101 (292)
319 2p2s_A Putative oxidoreductase 24.0 1.3E+02 0.0045 28.7 6.7 57 216-274 3-62 (336)
320 4h3v_A Oxidoreductase domain p 23.3 88 0.003 30.3 5.3 56 216-274 5-71 (390)
321 2a7y_A Hypothetical protein RV 21.7 74 0.0025 24.5 3.3 27 67-100 19-45 (83)
322 3euw_A MYO-inositol dehydrogen 21.4 1.6E+02 0.0053 28.3 6.6 48 224-274 9-61 (344)
323 3oj0_A Glutr, glutamyl-tRNA re 21.0 1.9E+02 0.0064 23.6 6.2 36 224-261 26-65 (144)
324 3uuw_A Putative oxidoreductase 21.0 1.6E+02 0.0056 27.6 6.6 54 216-274 5-64 (308)
325 3lkz_A Non-structural protein 20.9 52 0.0018 31.9 2.8 38 213-251 91-129 (321)
326 3mz0_A Inositol 2-dehydrogenas 20.3 1.8E+02 0.0062 27.8 6.8 49 224-274 7-62 (344)
No 1
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=100.00 E-value=4.2e-101 Score=864.79 Aligned_cols=484 Identities=53% Similarity=0.922 Sum_probs=424.4
Q ss_pred CeEeEEEEcCeEEeeCCeEEeCCCccccccCCccccccCCCCCCCCccchhhhcccCCceeccCCCCCCCceEEEEEEEE
Q psy13720 1 LYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIF 80 (487)
Q Consensus 1 ~~y~~v~~~g~~y~vGD~V~v~p~~~~~~~~~~~~~~~~~~~~~de~~~~e~~r~~~~~~~~~~~~~~~P~~IgrI~~i~ 80 (487)
++|+++.++|++|+|||+|||.|+.|.|+.++.++.+..+++++||++|||+|||.++|++|+|.++++||+||||++||
T Consensus 323 ~~~~~~~~~g~~y~vgD~Vyl~p~~~~f~~~~~~~~~~~~~~~vd~~~ype~yrk~~~~~kg~n~~~~~P~~IgrI~~i~ 402 (1002)
T 3swr_A 323 VLYYSATKNGILYRVGDGVYLPPEAFTFNIKLSSPVKRPRKEPVDEDLYPEHYRKYSDYIKGSNLDAPEPYRIGRIKEIF 402 (1002)
T ss_dssp EEESEEEETTEEEETTCEEEECTTSCCCSSCCCCCCCCSCSCCCCTTTCTTSGGGHHHHHTCCCCCCCCCCEEEEEEEEE
T ss_pred EEEEEEEECCEEEecCCEEEECCcccccccccccccccccccccccccchhhhhccchhccccccCCCCCceeeEEeEEE
Confidence 48999999999999999999999999999999999887777899999999999999999999999999999999999999
Q ss_pred ecCCCC-CCCCCceEEEEEeeeccccCCCCccccccCCCceEEecccceeecccceeeeeEEEeecCCcccccccccCCC
Q psy13720 81 KKKGKK-NVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGP 159 (487)
Q Consensus 81 ~~~~~~-~~~~~~~~v~v~wfyRp~dt~~~~~~~~~~d~reLF~S~~~d~vp~~~I~GKC~V~~~~~~~~~~~~~~~~~~ 159 (487)
.++++. ..+...++|+|+|||||+||+++....+++|.||||||++.+++|+++|+|||.|++.+++....++|...++
T Consensus 403 ~~~~~~~~~~~~~~~v~v~~fyRPed~~~~~~~~~~~D~~elf~S~~~~~~~~~~i~GkC~V~~~~d~~~~~~~~~~~~p 482 (1002)
T 3swr_A 403 CPKKSNGRPNETDIKIRVNKFYRPENTHKSTPASYHADINLLYWSDEEAVVDFKAVQGRCTVEYGEDLPECVQVYSMGGP 482 (1002)
T ss_dssp ECCCSSSSCCSSCCEEEEEECBCGGGSTTCGGGGSSSCTTEEEECCCEEEEEGGGCCEEEEEEEGGGCSSCHHHHHHTSS
T ss_pred ecCCccccCCCccEEEEEEEEECcccccccccccccCCcceEEEecceeccCHHHcceEEEEEEeccccccchhhccCCC
Confidence 887643 3355679999999999999988778788899999999999999999999999999999999877778998888
Q ss_pred CeeEEEEeecCCCCccccCchhhhhcccccCCCCCCCCCCCC-CCcccccCCCCCcCCCCeEeecccCchHHHHHHhhcC
Q psy13720 160 HRFYFNEAYNSKTEEFTNLPTEALFLGSVSKGKGKGKNQTNK-PEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSG 238 (487)
Q Consensus 160 d~Fy~~~~Yd~~~~~f~~~P~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~ldLFsG~Gg~s~Gl~~aG 238 (487)
|+|||.+.||+.+++|+.||.+++++++|.++|+++|...+. ..+.....+...+ .+++++||||||||+++||++||
T Consensus 483 ~~fyf~~~Yd~~~~~f~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~iDLFaG~GGlslGl~~AG 561 (1002)
T 3swr_A 483 NRFYFLEAYNAKSKSFEDPPNHARSPGNKGKGKGKGKGKPKSQACEPSEPEIEIKL-PKLRTLDVFSGCGGLSEGFHQAG 561 (1002)
T ss_dssp SEEEEEEEEETTTTEEECCCSTTSCC----------------------CCCCCCCC-CCEEEEEESCTTSHHHHHHHHHT
T ss_pred CeEEEEEEEeCCCCeeecCccccccccccccccccccccccccccccccccccccC-CCCeEEEeccCccHHHHHHHHCC
Confidence 999999999999999999999999999998888777665543 1111111233344 78999999999999999999999
Q ss_pred CCcEEEEEcCcHHHHHHHHHhCCCCceeccchHHHHHHhhchhhhccccccCCCCCcccEEEccCCCcCcccCCccCCcc
Q psy13720 239 VARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQ 318 (487)
Q Consensus 239 ~~~~~~a~e~~~~a~~t~~~N~p~~~~~~~di~~~~~~~~~~~~~~~~~~~~p~~~~vd~i~ggpPCq~fS~~~~~~~~~ 318 (487)
+.+++||+|+|+.|++||++|||++.++++||++++..+..+++.+.....+|..+++|||+||||||+||.+|+.+.+.
T Consensus 562 ~~~vv~avEid~~A~~ty~~N~p~~~~~~~DI~~l~~~~~~~di~~~~~~~lp~~~~vDll~GGpPCQ~FS~ag~~~~~~ 641 (1002)
T 3swr_A 562 ISDTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILLKLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRT 641 (1002)
T ss_dssp SEEEEEEECSSHHHHHHHHHHCTTSEEECSCHHHHHHHHHHTCSBCTTCCBCCCTTTCSEEEECCCCTTCCSSSCCCHHH
T ss_pred CCceEEEEECCHHHHHHHHHhCCCCccccccHHHHhhhccchhhhhhhhhhcccCCCeeEEEEcCCCcchhhhCCCCCCc
Confidence 75799999999999999999999999999999999877777777766666788788999999999999999999754455
Q ss_pred cccchhHHHHHHHHHhhhcCCcEEEEecCcchhcccchhHHHHHHHHHHhCCCeeEEEEEeccCCCCCCcccEEEEEEEc
Q psy13720 319 YSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAA 398 (487)
Q Consensus 319 ~~d~r~~L~~~~l~~v~~~~P~~~ilENV~gl~~~~~~~~~~~i~~~l~~~GY~~~~~~l~a~~yGvPQ~R~R~fiia~~ 398 (487)
.+|+|+.|+.+|+++|+.++|++||||||+||++++++..++.+++.|.++||++.+.+|||++|||||+|+|+||||++
T Consensus 642 ~~d~R~~L~~~~~riv~~~rPk~~llENV~glls~~~~~~~~~i~~~L~~lGY~v~~~vLnA~dyGvPQ~R~R~fiva~r 721 (1002)
T 3swr_A 642 YSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAA 721 (1002)
T ss_dssp HHHHTTSHHHHHHHHHHHHCCSEEEEEEEGGGGTTGGGHHHHHHHHHHHHHTCEEEEEEEEGGGGTCSBCCEEEEEEEEC
T ss_pred ccchhhHHHHHHHHHHHHhCCCEEEEeccHHHhccCcchHHHHHHHHHHhcCCeEEEEEEEHHHCCCCccceEEEEEEEe
Confidence 67889999999999999999999999999999999888999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCccCCCCCcccceecccccccccccccCCCCCCcccHHHHhcCCCCCCCCCCccccCCCCCCCCHHHHH
Q psy13720 399 PGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQRE 478 (487)
Q Consensus 399 ~~~~~p~~P~pth~~~~~~~~l~~~~~~~~~~~~~~~~~~~p~~~vtv~dai~dLp~~~~g~~~~~~~y~~~p~~~~q~~ 478 (487)
+|..+|.+|.|||.+..+...|...++++.+.++..|....|++++||+|||+|||.+.+|+....++|...|.++||++
T Consensus 722 ~g~~~p~~P~pth~~~~~~~~l~~~~~~~~~~~~~~~~~~~p~~~vTV~DAIsDLP~i~~g~~~~~~~y~~~p~s~yq~~ 801 (1002)
T 3swr_A 722 PGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEVRNGASALEISYNGEPQSWFQRQ 801 (1002)
T ss_dssp TTSCCCCCCCCCBCCCGGGCCCCEEETTEEECCSCCCSSCCSBCCCCHHHHHTTSCCCCTTCCCSEECCCSCCCSHHHHH
T ss_pred CCCCCCCCCCccccccccccccccccccccccccccccccCCcCCcCHHHHhhhCCccccCccccccccCCCCccHHHHH
Confidence 99999999999999888888888888888888777777777888999999999999999999988999999999999999
Q ss_pred HHhccCC
Q psy13720 479 KVWKCYS 485 (487)
Q Consensus 479 ~r~~~~~ 485 (487)
||+..++
T Consensus 802 mR~~~~~ 808 (1002)
T 3swr_A 802 LRGAQYQ 808 (1002)
T ss_dssp HHTTCSS
T ss_pred hhccccc
Confidence 9986553
No 2
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=100.00 E-value=5.3e-94 Score=823.50 Aligned_cols=483 Identities=55% Similarity=0.947 Sum_probs=400.0
Q ss_pred CeEeEEEEcCeEEeeCCeEEeCCCccccccCCccccccCCCCCCCCccchhhhcccCCceeccCCCCCCCceEEEEEEEE
Q psy13720 1 LYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIF 80 (487)
Q Consensus 1 ~~y~~v~~~g~~y~vGD~V~v~p~~~~~~~~~~~~~~~~~~~~~de~~~~e~~r~~~~~~~~~~~~~~~P~~IgrI~~i~ 80 (487)
+||++++++|++|+|||||||.|+.|+|..+++++.++.+++++|+++|||+|||.++|++|+|.+.++||+||||.+||
T Consensus 635 ~~Y~~~~~~g~~Y~vgD~Vyl~p~~f~~~~~~~~~~~~~~~~~~~~~~ype~yrk~~~~~kg~~~~~~~Py~IgqI~eI~ 714 (1330)
T 3av4_A 635 VYCSSITKNGVVYRLGDSVYLPPEAFTFNIKVASPVKRPKKDPVNETLYPEHYRKYSDYIKGSNLDAPEPYRIGRIKEIH 714 (1330)
T ss_dssp EEEEEEEETTEEEETTCEEEECTTSCCCCCCC-------CCCCCCTTTCSSGGGGGC-------CCCCCCCEEEEEEECC
T ss_pred eeeeEEEECCEEEecCCEEEECcccccccccccccccccccccccccccchhhhcccccccccccCCCCCceEEEEEEEE
Confidence 58999999999999999999999999999999998887788999999999999999999999999999999999999999
Q ss_pred ecCCCCCCCCCceEEEEEeeeccccCCCCccccccCCCceEEecccceeecccceeeeeEEEeecCCcccccccccCCCC
Q psy13720 81 KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPH 160 (487)
Q Consensus 81 ~~~~~~~~~~~~~~v~v~wfyRp~dt~~~~~~~~~~d~reLF~S~~~d~vp~~~I~GKC~V~~~~~~~~~~~~~~~~~~d 160 (487)
.+.++...+.+..+|+|+|||||+||++.....+.+|.||||||++.+++|+++|.|||+|++.++++++.++|...+++
T Consensus 715 ~~~~s~~~~~~~~~vrV~wFyRPedt~~~~~~~~~~D~nELf~S~~~~~vp~~~I~GKC~V~~~~d~~~~i~~y~~~g~d 794 (1330)
T 3av4_A 715 CGKKKGKVNEADIKLRLYKFYRPENTHRSYNGSYHTDINMLYWSDEEAVVNFSDVQGRCTVEYGEDLLESIQDYSQGGPD 794 (1330)
T ss_dssp CCEETTEECSSCCEEEEEEEECTTTSTTGGGTTTTSCTTBCEEEEEEEEEEGGGCCEEEEEEESTTCSSCHHHHHHTSTT
T ss_pred ecCCccccCCCceEEEEEEeeChhhcccccccccccCcceEEeeccceecCHHHcCceEEEEecccccccccccccCCCC
Confidence 87653333557899999999999999876666677999999999999999999999999999999988877789988899
Q ss_pred eeEEEEeecCCCCccccCchhhhhcccccCCCCCCCCCCCCC-CcccccCCCCCcCCCCeEeecccCchHHHHHHhhcCC
Q psy13720 161 RFYFNEAYNSKTEEFTNLPTEALFLGSVSKGKGKGKNQTNKP-EEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGV 239 (487)
Q Consensus 161 ~Fy~~~~Yd~~~~~f~~~P~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~ldLFsG~Gg~s~Gl~~aG~ 239 (487)
+|||++.||+.+++|+.||..++.+.++.++|++++...+.. .+..+.+....+ .+++++|||||||||++||++||+
T Consensus 795 ~Fy~~~~Yd~~~k~~~~~P~~~~~~~~~~~~k~~g~~~~~~~~~~~~~~~~~~~~-~~l~viDLFsG~GGlslGfe~AG~ 873 (1330)
T 3av4_A 795 RFYFLEAYNSKTKNFEDPPNHARSPGNKGKGKGKGKGKGKHQVSEPKEPEAAIKL-PKLRTLDVFSGCGGLSEGFHQAGI 873 (1330)
T ss_dssp EEEESCEEETTTTEEECCCGGGCC-----------------------------CC-CCEEEEEETCTTSHHHHHHHHTTS
T ss_pred eEEEEEEecccCCeeccCchHhhcccccccccccccccccccccccccchhhhcc-CCceEEecccCccHHHHHHHHCCC
Confidence 999999999999999999999998888766665555322221 111110112233 789999999999999999999997
Q ss_pred CcEEEEEcCcHHHHHHHHHhCCCCceeccchHHHHHHhhchhhhccccccCCCCCcccEEEccCCCcCcccCCccCCccc
Q psy13720 240 ARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQY 319 (487)
Q Consensus 240 ~~~~~a~e~~~~a~~t~~~N~p~~~~~~~di~~~~~~~~~~~~~~~~~~~~p~~~~vd~i~ggpPCq~fS~~~~~~~~~~ 319 (487)
.+++||+|+|+.|++||++|||++.++++||++++..+..+++.......+|..+++|||+||||||+||.+|+.+.+..
T Consensus 874 ~~vv~avEid~~A~~ty~~N~p~~~~~~~DI~~l~~~~~~gdi~~~~~~~lp~~~~vDvl~GGpPCQ~FS~agr~~~~~~ 953 (1330)
T 3av4_A 874 SETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTY 953 (1330)
T ss_dssp EEEEEEECCSHHHHHHHHHHCTTSEEECSCHHHHHHHHTTTCSBCSSCCBCCCTTTCSEEEECCCCTTTCSSSCCCHHHH
T ss_pred CceEEEEECCHHHHHHHHHhCCCCcEeeccHHHHhHhhhccchhhhhhhhccccCccceEEecCCCcccccccccccccc
Confidence 57999999999999999999999999999999998777667766655566777789999999999999999997544556
Q ss_pred ccchhHHHHHHHHHhhhcCCcEEEEecCcchhcccchhHHHHHHHHHHhCCCeeEEEEEeccCCCCCCcccEEEEEEEcC
Q psy13720 320 SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAP 399 (487)
Q Consensus 320 ~d~r~~L~~~~l~~v~~~~P~~~ilENV~gl~~~~~~~~~~~i~~~l~~~GY~~~~~~l~a~~yGvPQ~R~R~fiia~~~ 399 (487)
+|+|+.|+.+|+++|+.++|++||||||+||++++++..++.++..|.++||++.+.+|||++|||||+|+|+||||++.
T Consensus 954 ~d~R~~L~~~~lriv~~~rPk~fv~ENV~glls~~~g~~~~~il~~L~~lGY~v~~~vLnA~dyGVPQ~R~Rvfivg~r~ 1033 (1330)
T 3av4_A 954 SKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP 1033 (1330)
T ss_dssp HHHHHSHHHHHHHHHHHHCCSEEEEEEEGGGGTTTTTHHHHHHHHHHHHHTCEEEEEEEEGGGGSCSBCCEEEEEEEECT
T ss_pred cchhhHHHHHHHHHHHHhcCcEEEEeccHHHhccCccHHHHHHHHHHHhcCCeeeEEEecHHHcCCCccccEEEEEEecC
Confidence 78999999999999999999999999999999998889999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCccCCCCCcccceecccccccccccccCCCCCCcccHHHHhcCCCCCCCCCCccccCCCCCCCCHHHHHH
Q psy13720 400 GEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREK 479 (487)
Q Consensus 400 ~~~~p~~P~pth~~~~~~~~l~~~~~~~~~~~~~~~~~~~p~~~vtv~dai~dLp~~~~g~~~~~~~y~~~p~~~~q~~~ 479 (487)
+..+|.||.|||.+..+.+.|...++++.+..++.|....|++.+||+|||+|||.+.+|.....++|.+.|.++||+.|
T Consensus 1034 ~~~~~~fP~pth~~~~~~~~l~~~~~~~~~~~~i~~~~~~p~~~vTV~DAI~DLP~i~~g~~~~~~~y~~~p~s~~q~~i 1113 (1330)
T 3av4_A 1034 GEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEIQNGASNSEIPYNGEPLSWFQRQL 1113 (1330)
T ss_dssp TSCCCCCCCCCBCCCGGGCCCCEEETTEEECCSCCCSSCCSBCCCCHHHHHTTSCCCCTTCCCSEEECCSCCCSHHHHHH
T ss_pred CCcccCCCCccccccccccccccccccccccccccccccCCcCCCcHHHHhhcCcccccCCcccccccCCCcccHHHHHh
Confidence 98889999999988777677777777777777677776667778999999999999999887777888888899999999
Q ss_pred HhccC
Q psy13720 480 VWKCY 484 (487)
Q Consensus 480 r~~~~ 484 (487)
|+..+
T Consensus 1114 R~~~~ 1118 (1330)
T 3av4_A 1114 RGSHY 1118 (1330)
T ss_dssp HCSSC
T ss_pred hcccc
Confidence 98765
No 3
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=100.00 E-value=4.1e-77 Score=670.21 Aligned_cols=423 Identities=26% Similarity=0.437 Sum_probs=331.2
Q ss_pred eEeEEEEcCeEEeeCCeEEeCCCccccccCCccccccCCCCCCCCccchhhhcccCCceeccCCCCCCCceEEEEEEEEe
Q psy13720 2 YYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFK 81 (487)
Q Consensus 2 ~y~~v~~~g~~y~vGD~V~v~p~~~~~~~~~~~~~~~~~~~~~de~~~~e~~r~~~~~~~~~~~~~~~P~~IgrI~~i~~ 81 (487)
+|+++.++|+.|+|||+|||..+. ++|+|||+|++||+
T Consensus 47 ~~~~~~~~~~~~~~~d~~~v~~~~------------------------------------------~~~~~i~~i~~~~~ 84 (784)
T 4ft4_B 47 HYRSAKVDNVVYCLGDDVYVKAGE------------------------------------------NEADYIGRITEFFE 84 (784)
T ss_dssp ECSEEEETTEEEETTCEEEECCST------------------------------------------TSCCEEEEEEEEEE
T ss_pred eeeeeeECCEEEeCCCeEEEeCCC------------------------------------------CCCCEEEEEEEEEE
Confidence 799999999999999999997643 67889999999999
Q ss_pred cCCCCCCCCCceEEEEEeeeccccCCCCcc-----ccccCCCceEEecccceeecccceeeeeEEEeecCCccccccccc
Q psy13720 82 KKGKKNVSASDVFLTVKKFYRPENTHRSVE-----FTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSS 156 (487)
Q Consensus 82 ~~~~~~~~~~~~~v~v~wfyRp~dt~~~~~-----~~~~~d~reLF~S~~~d~vp~~~I~GKC~V~~~~~~~~~~~~~~~ 156 (487)
+.+ +..+|+||||||++||++... ..+.+|+||||+|+++++||+++|.|||+|.+.++..+....+..
T Consensus 85 ~~~------~~~~~~~~~~~r~~d~~~~~~~~~~~~~~~~d~~~~~~s~~~~~~~~~~i~~k~~v~~~~~~~~~~~~~~~ 158 (784)
T 4ft4_B 85 GTD------QCHYFTCRWFFRAEDTVINSLVSISVDGHKHDPRRVFLSEEKNDNVLDCIISKVKIVHVDPNMDPKAKAQL 158 (784)
T ss_dssp ETT------SCEEEEEEEEEEGGGSTTGGGGGCCBTTBCCCTTBEEEEEEEEEEEGGGEEEECCEEECCTTSCHHHHHHH
T ss_pred cCC------CCEEEEEEEeeChhhhcccccccccccccccccceEEEeCcEEEechHHeeeeEEEEeeCccccchhhhhc
Confidence 987 889999999999999986542 245689999999999999999999999999998865543322222
Q ss_pred CCCCeeEEEEeecCCCCccccCchhhhhc-ccccCCCCCCCCCCCCCCcccccCCCCCcCCCCeEeecccCchHHHHHHh
Q psy13720 157 RGPHRFYFNEAYNSKTEEFTNLPTEALFL-GSVSKGKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLD 235 (487)
Q Consensus 157 ~~~d~Fy~~~~Yd~~~~~f~~~P~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ldLFsG~Gg~s~Gl~ 235 (487)
...++|||++.|+....+|+.++.+.... ..+..... . ...........-+++|++|||||||||||+||+
T Consensus 159 ~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~--~------~~~~~~~~~~~~~k~ltvIDLFAG~GGls~Gfe 230 (784)
T 4ft4_B 159 IESCDLYYDMSYSVAYSTFANISSENGQSGSDTASGIS--S------DDVDLETSSSMPTRTATLLDLYSGCGGMSTGLC 230 (784)
T ss_dssp HHHCSEEESEEEETGGGEEEEC-------------------------------------CEEEEEEEETCTTSHHHHHHH
T ss_pred cCCcceEeccccCccccCccCCCccccccccccccccc--c------cccccccccccCCCCCeEEEeCcCccHHHHHHH
Confidence 34578999999999999999887654322 11111000 0 000000111122468999999999999999999
Q ss_pred hcC------CCcEEEEEcCcHHHHHHHHHhCCCCceeccchHHHHHHhhchhh---------------------------
Q psy13720 236 KSG------VARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEV--------------------------- 282 (487)
Q Consensus 236 ~aG------~~~~~~a~e~~~~a~~t~~~N~p~~~~~~~di~~~~~~~~~~~~--------------------------- 282 (487)
+|| | +++||+|+|+.|++||++|||++.++++||++++........
T Consensus 231 ~AG~~~~~~f-~vv~AvE~d~~A~~Ty~~Nhp~~~~~~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (784)
T 4ft4_B 231 LGAALSGLKL-ETRWAVDFNSFACQSLKYNHPQTEVRNEKADEFLALLKEWAVLCKKYVQDVDSNLASSEDQADEDSPLD 309 (784)
T ss_dssp HHHHHHTEEE-EEEEEEESCHHHHHHHHHHCTTSEEEESCHHHHHHHHHHHHHHHHHTC---------------------
T ss_pred HhCcccCCce-eEEEEEeCCHHHHHHHHHHCCCCceecCcHHHhhhhhhhcccccccccccccccccccccccccccccc
Confidence 998 6 899999999999999999999999999999988654321100
Q ss_pred ---------------------------------------------------------hccccccCCCCCcccEEEccCCC
Q psy13720 283 ---------------------------------------------------------CDDKKQKLPRKGEVEMLCGGPPC 305 (487)
Q Consensus 283 ---------------------------------------------------------~~~~~~~~p~~~~vd~i~ggpPC 305 (487)
.......+|.+|+||||+|||||
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~i~~~~~~~~~~~~~~~~G~VDvl~GGpPC 389 (784)
T 4ft4_B 310 KDEFVVEKLVGICYGGSDRENGIYFKVQWEGYGPEEDTWEPIDNLSDCPQKIREFVQEGHKRKILPLPGDVDVICGGPPC 389 (784)
T ss_dssp --CCCEEEEEEEEESCSSSCSSEEEEEEETTCCTTSCEEEESGGGTTCHHHHHHHHHHHHHHTSSCCTTSCSEEEECCCC
T ss_pred cccchhhhhcccccccccccccccchhhhcccccccccccccccccccchhccccccccchhhccCCCCCeEEEEecCCC
Confidence 00012346778999999999999
Q ss_pred cCcccCCccCCc--ccccchhHHHHHHHHHhhhcCCcEEEEecCcchhcccchhHHHHHHHHHHhCCCeeEEEEEeccCC
Q psy13720 306 QGFSGMNRFNQR--QYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 383 (487)
Q Consensus 306 q~fS~~~~~~~~--~~~d~r~~L~~~~l~~v~~~~P~~~ilENV~gl~~~~~~~~~~~i~~~l~~~GY~~~~~~l~a~~y 383 (487)
|+||.||++++. ..+|+|+.|+++|+++|+.++|++||||||+||++.+++..++.|++.|.++||++.+.+|||++|
T Consensus 390 Q~FS~aG~~kg~~~~~~D~R~~L~~~~~riv~~~rPk~fvlENV~glls~~~g~~~~~il~~l~~lGY~v~~~vLnA~dy 469 (784)
T 4ft4_B 390 QGISGFNRYRNRDEPLKDEKNKQMVTFMDIVAYLKPKYVLMENVVDILKFADGYLGKYALSCLVAMKYQARLGMMVAGCY 469 (784)
T ss_dssp CSSSGGGGGSCTTSTTTSTTCHHHHHHHHHHHHHCCSEEEEEEEGGGGTGGGGHHHHHHHHHHHHTTCEEEEEEEEGGGG
T ss_pred cchhhhhcccCcCccccCchhHHHHHHHHHHHHHCCCEEEEEecCCccccccchHHHHHHHHHHhCCCeeeeeecCHHHc
Confidence 999999976442 357899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccEEEEEEEcCCCCCCCCCCCCccCCCCCcccceecccccccccccccCCCCCCcccHHHHhcCCCCCCCCCCcc
Q psy13720 384 GVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKME 463 (487)
Q Consensus 384 GvPQ~R~R~fiia~~~~~~~p~~P~pth~~~~~~~~l~~~~~~~~~~~~~~~~~~~p~~~vtv~dai~dLp~~~~g~~~~ 463 (487)
||||+|+|+||||++++..+|.+|.|||....+.......... .............+.+|++|||+|||.+..+....
T Consensus 470 GVPQ~R~Rvfivg~r~d~~~~~~P~pth~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~t~~dai~dlp~~~~~~~~~ 547 (784)
T 4ft4_B 470 GLPQFRMRVFLWGALSSMVLPKYPLPTYDVVVRGGAPNAFSQC--MVAYDETQKPSLKKALLLGDAISDLPKVQNHQPND 547 (784)
T ss_dssp TCSSCCEEEEEEEECTTSCCCCEECCSBCCCCCSCSCGGGTTC--BCSCCTTCCCCCBCCCCHHHHHTTSCCCCSCCCCS
T ss_pred CCCcccccceeeeeccCCCcccCCCcccccccccccccccccc--cccccccccccccccccHHHHhhcccccccCCCcc
Confidence 9999999999999999999999999999765543221111000 00000111223456789999999999999998888
Q ss_pred ccCCCCCCCCHHHHHHHhcc
Q psy13720 464 ELPYKENALSHFQREKVWKC 483 (487)
Q Consensus 464 ~~~y~~~p~~~~q~~~r~~~ 483 (487)
...|...|.+.||+.+|...
T Consensus 548 ~~~~~~~~~~~~~~~~r~~~ 567 (784)
T 4ft4_B 548 VMEYGGSPKTEFQRYIRLSR 567 (784)
T ss_dssp EECCSSCCCSHHHHHHTCCT
T ss_pred ccccCCCCccHHHHHHhhcc
Confidence 88999999999999998754
No 4
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=100.00 E-value=8e-50 Score=410.96 Aligned_cols=227 Identities=22% Similarity=0.340 Sum_probs=185.1
Q ss_pred CCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCCCCceeccchHHHHHHhhchhhhccccccCCCCCcc
Q psy13720 217 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEV 296 (487)
Q Consensus 217 ~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p~~~~~~~di~~~~~~~~~~~~~~~~~~~~p~~~~v 296 (487)
+++++||||||||+++||+++|+ ++++|+|+|+.|++||++|||++.++++||.++... ++.. ..+ ..+++
T Consensus 2 ~~~vidLFsG~GGlslG~~~aG~-~~v~avE~d~~a~~t~~~N~~~~~~~~~DI~~~~~~----~~~~---~~~-~~~~~ 72 (376)
T 3g7u_A 2 SLNVIDLFSGVGGLSLGAARAGF-DVKMAVEIDQHAINTHAINFPRSLHVQEDVSLLNAE----IIKG---FFK-NDMPI 72 (376)
T ss_dssp CCEEEEETCTTSHHHHHHHHHTC-EEEEEECSCHHHHHHHHHHCTTSEEECCCGGGCCHH----HHHH---HHC-SCCCC
T ss_pred CCeEEEEccCcCHHHHHHHHCCC-cEEEEEeCCHHHHHHHHHhCCCCceEecChhhcCHH----HHHh---hcc-cCCCe
Confidence 58999999999999999999998 999999999999999999999999999999876321 1111 001 23579
Q ss_pred cEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhhcCCcEEEEecCcchhcccchhHHHHHHHHHHhCCCee-EE
Q psy13720 297 EMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQC-TF 375 (487)
Q Consensus 297 d~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~~~P~~~ilENV~gl~~~~~~~~~~~i~~~l~~~GY~~-~~ 375 (487)
|+|+||||||+||.+|+. ..+|+|+.|+.+|+++|+.++|++|+||||+||++.+++.+++.++ .|.++||++ .+
T Consensus 73 D~i~ggpPCQ~fS~ag~~---~~~d~r~~L~~~~~~~v~~~~P~~~v~ENV~gl~s~~~~~~~~~i~-~l~~~GY~v~~~ 148 (376)
T 3g7u_A 73 DGIIGGPPCQGFSSIGKG---NPDDSRNQLYMHFYRLVSELQPLFFLAENVPGIMQEKYSGIRNKAF-NLVSGDYDILDP 148 (376)
T ss_dssp CEEEECCCCCTTC----------CHHHHHHHHHHHHHHHHHCCSEEEEEECTTTTCGGGHHHHHHHH-HHHHTTEEECCC
T ss_pred eEEEecCCCCCcccccCC---CCCCchHHHHHHHHHHHHHhCCCEEEEecchHhhccCcHHHHHHHH-HHHcCCCccCcE
Confidence 999999999999999863 5689999999999999999999999999999999988888999999 999999999 99
Q ss_pred EEEeccCCCCCCcccEEEEEEEcCCCCCCCCCCCCccCCCCCcccceecccccccccccccCCCCCCcccHHHHhcCCCC
Q psy13720 376 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPE 455 (487)
Q Consensus 376 ~~l~a~~yGvPQ~R~R~fiia~~~~~~~p~~P~pth~~~~~~~~l~~~~~~~~~~~~~~~~~~~p~~~vtv~dai~dLp~ 455 (487)
.+|||++|||||+|+|+||||++++..+|.+ .|+|... ..+.+||+|||+|||.
T Consensus 149 ~vl~a~dyGvPQ~R~R~~iig~r~~~~~~~~-~p~~~~~-------------------------~~~~~tv~dai~dlp~ 202 (376)
T 3g7u_A 149 IKVKASDYGAPTIRTRYFFIGVKKSLKLDIS-DEVFMPK-------------------------MIDPVTVKDALYGLPD 202 (376)
T ss_dssp EEEEGGGGTCSBCCEEEEEEEEEGGGCCCCC-GGGTSCC-------------------------SCCCCCHHHHTTTCCS
T ss_pred EEEEHhhCCCCCCCcEEEEEEEeCCCCCCcc-ccccccc-------------------------cCCCCcHHHHHhcCCc
Confidence 9999999999999999999999999877655 6666311 0245799999999999
Q ss_pred CCC-CCCccccC---CCCCCCCHHHHHHHhc
Q psy13720 456 IQN-GCKMEELP---YKENALSHFQREKVWK 482 (487)
Q Consensus 456 ~~~-g~~~~~~~---y~~~p~~~~q~~~r~~ 482 (487)
+.+ +....... |...+.+.||+.||..
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~y~~~~r~~ 233 (376)
T 3g7u_A 203 IIDANWQSDSESWRTIKKDRKGGFYEKLWGQ 233 (376)
T ss_dssp SCEEESSCSSCCCEECCCCCCSHHHHHHHCC
T ss_pred ccccccccccccccccCccCccHHHHHhhcC
Confidence 876 33222222 3334679999999975
No 5
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=100.00 E-value=1.1e-48 Score=396.78 Aligned_cols=171 Identities=26% Similarity=0.495 Sum_probs=155.6
Q ss_pred CeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCCCCceeccchHHHHHHhhchhhhccccccCCCCCccc
Q psy13720 218 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVE 297 (487)
Q Consensus 218 l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p~~~~~~~di~~~~~~~~~~~~~~~~~~~~p~~~~vd 297 (487)
|++|||||||||+++||++||| ++++|+|+|+.|++||++|||. .++.+||.++ ....+| ++|
T Consensus 1 mkvidLFsG~GG~~~G~~~aG~-~~v~a~e~d~~a~~ty~~N~~~-~~~~~DI~~i------------~~~~~~---~~D 63 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKAGF-RIICANEYDKSIWKTYESNHSA-KLIKGDISKI------------SSDEFP---KCD 63 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHTTC-EEEEEEECCTTTHHHHHHHCCS-EEEESCGGGC------------CGGGSC---CCS
T ss_pred CeEEEeCcCccHHHHHHHHCCC-EEEEEEeCCHHHHHHHHHHCCC-CcccCChhhC------------CHhhCC---ccc
Confidence 6899999999999999999998 9999999999999999999985 5677888764 223445 799
Q ss_pred EEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhhcCCcEEEEecCcchhcccchhHHHHHHHHHHhCCCeeEEEE
Q psy13720 298 MLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGT 377 (487)
Q Consensus 298 ~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~~~P~~~ilENV~gl~~~~~~~~~~~i~~~l~~~GY~~~~~~ 377 (487)
+|+||||||+||.+|+. ++.+|+|+.|+.+++++|+.++|++|+||||+||++.+++..+..+++.|.++||++.+.+
T Consensus 64 ~l~ggpPCQ~fS~ag~~--~g~~d~R~~L~~~~~r~i~~~~Pk~~~~ENV~gl~~~~~~~~~~~i~~~l~~~GY~v~~~v 141 (331)
T 3ubt_Y 64 GIIGGPPSQSWSEGGSL--RGIDDPRGKLFYEYIRILKQKKPIFFLAENVKGMMAQRHNKAVQEFIQEFDNAGYDVHIIL 141 (331)
T ss_dssp EEECCCCGGGTEETTEE--CCTTCGGGHHHHHHHHHHHHHCCSEEEEEECCGGGGCTTSHHHHHHHHHHHHHTEEEEEEE
T ss_pred EEEecCCCCCcCCCCCc--cCCCCchhHHHHHHHHHHhccCCeEEEeeeecccccccccchhhhhhhhhccCCcEEEEEe
Confidence 99999999999999964 4568999999999999999999999999999999999999999999999999999999999
Q ss_pred EeccCCCCCCcccEEEEEEEcCCCCCCCCC
Q psy13720 378 LQAGHFGVSQTRRRAIVLAAAPGEVLPKYP 407 (487)
Q Consensus 378 l~a~~yGvPQ~R~R~fiia~~~~~~~p~~P 407 (487)
|||++|||||+|+|+||||++++..++..|
T Consensus 142 lna~~yGvPQ~R~Rvfivg~r~~~~~~~~~ 171 (331)
T 3ubt_Y 142 LNANDYGVAQDRKRVFYIGFRKELNINYLP 171 (331)
T ss_dssp EEGGGTTCSBCCEEEEEEEEEGGGCCCCCC
T ss_pred cccccCCCCcccceEEEEEEcCCCCcCCCC
Confidence 999999999999999999999887665443
No 6
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=100.00 E-value=2.3e-45 Score=371.17 Aligned_cols=177 Identities=24% Similarity=0.501 Sum_probs=158.4
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCCCCceeccchHHHHHHhhchhhhccccccCCCCCc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGE 295 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p~~~~~~~di~~~~~~~~~~~~~~~~~~~~p~~~~ 295 (487)
.+++++|||||+||+++||+++|+ ++++|+|+|+.|++||++|||++. ++||.++. ...+| +
T Consensus 10 ~~~~~~dLFaG~Gg~~~g~~~aG~-~~v~~~e~d~~a~~t~~~N~~~~~--~~Di~~~~------------~~~~~---~ 71 (327)
T 2c7p_A 10 TGLRFIDLFAGLGGFRLALESCGA-ECVYSNEWDKYAQEVYEMNFGEKP--EGDITQVN------------EKTIP---D 71 (327)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTTC-EEEEEECCCHHHHHHHHHHHSCCC--BSCGGGSC------------GGGSC---C
T ss_pred CCCcEEEECCCcCHHHHHHHHCCC-eEEEEEeCCHHHHHHHHHHcCCCC--cCCHHHcC------------HhhCC---C
Confidence 679999999999999999999998 999999999999999999998865 67876541 22344 6
Q ss_pred ccEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhhcCCcEEEEecCcchhcccchhHHHHHHHHHHhCCCeeEE
Q psy13720 296 VEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 375 (487)
Q Consensus 296 vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~~~P~~~ilENV~gl~~~~~~~~~~~i~~~l~~~GY~~~~ 375 (487)
+|+|+||||||+||.+|+. ++.+|+|+.|+.+++++|+.++|++|+||||+||++.+++..++.+++.|+++||++.+
T Consensus 72 ~D~l~~gpPCQ~fS~ag~~--~g~~d~r~~L~~~~~r~i~~~~P~~~~~ENV~gl~~~~~~~~~~~i~~~l~~~GY~v~~ 149 (327)
T 2c7p_A 72 HDILCAGFPCQAFSISGKQ--KGFEDSRGTLFFDIARIVREKKPKVVFMENVKNFASHDNGNTLEVVKNTMNELDYSFHA 149 (327)
T ss_dssp CSEEEEECCCTTTCTTSCC--CGGGSTTSCHHHHHHHHHHHHCCSEEEEEEEGGGGTGGGGHHHHHHHHHHHHTTBCCEE
T ss_pred CCEEEECCCCCCcchhccc--CCCcchhhHHHHHHHHHHHhccCcEEEEeCcHHHHhccccHHHHHHHHHHHhCCCEEEE
Confidence 8999999999999999973 44568899999999999999999999999999999988889999999999999999999
Q ss_pred EEEeccCCCCCCcccEEEEEEEcCCCCC--CCCCCCCcc
Q psy13720 376 GTLQAGHFGVSQTRRRAIVLAAAPGEVL--PKYPEPWTV 412 (487)
Q Consensus 376 ~~l~a~~yGvPQ~R~R~fiia~~~~~~~--p~~P~pth~ 412 (487)
.+|||++|||||+|+|+||||++.+... ..||.|+|.
T Consensus 150 ~vl~a~~~GvPQ~R~R~~iv~~~~~~~~~~~~fP~~~~~ 188 (327)
T 2c7p_A 150 KVLNALDYGIPQKRERIYMICFRNDLNIQNFQFPKPFEL 188 (327)
T ss_dssp EEEEGGGGTCSBCCEEEEEEEEBGGGCCCCCCCCCCCCC
T ss_pred EEEEHHHcCCCccceEEEEEEEeCCCCcccccCCCCcCC
Confidence 9999999999999999999999987542 467888764
No 7
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=100.00 E-value=2.8e-43 Score=356.46 Aligned_cols=170 Identities=19% Similarity=0.325 Sum_probs=150.7
Q ss_pred CCCeEeecccCchHHHHHHhhcCC-CcEEEEEcCcHHHHHHHHHhCCCCceeccchHHHHHHhhchhhhccccccCCCCC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGV-ARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKG 294 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~-~~~~~a~e~~~~a~~t~~~N~p~~~~~~~di~~~~~~~~~~~~~~~~~~~~p~~~ 294 (487)
.+++++|||||+||+++||++||+ .++++|+|+|+.|++||++|||++.++++||.++... .++ ..
T Consensus 2 m~~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~~~~~~~DI~~~~~~------------~~~-~~ 68 (333)
T 4h0n_A 2 MSHKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPETNLLNRNIQQLTPQ------------VIK-KW 68 (333)
T ss_dssp -CEEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECCCGGGCCHH------------HHH-HT
T ss_pred CCCEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCCCceeccccccCCHH------------Hhc-cC
Confidence 478999999999999999999997 5899999999999999999999998899999865211 111 12
Q ss_pred cccEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhhcC-CcEEEEecCcchhcccchhHHHHHHHHHHhCCCee
Q psy13720 295 EVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR-PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQC 373 (487)
Q Consensus 295 ~vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~~~-P~~~ilENV~gl~~~~~~~~~~~i~~~l~~~GY~~ 373 (487)
++|+|+||||||+||.+|+. ++.+|+|+.|+.+++++|+.++ |++|+||||+||++. ..++.+++.|+++||++
T Consensus 69 ~~D~l~ggpPCQ~fS~ag~~--~~~~d~r~~L~~~~~r~i~~~~~P~~~vlENV~gl~~~---~~~~~i~~~l~~~GY~v 143 (333)
T 4h0n_A 69 NVDTILMSPPCQPFTRNGKY--LDDNDPRTNSFLYLIGILDQLDNVDYILMENVKGFENS---TVRNLFIDKLKECNFIY 143 (333)
T ss_dssp TCCEEEECCCCCCSEETTEE--CCTTCTTSCCHHHHHHHGGGCTTCCEEEEEECTTGGGS---HHHHHHHHHHHHTTEEE
T ss_pred CCCEEEecCCCcchhhhhhc--cCCcCcccccHHHHHHHHHHhcCCCEEEEecchhhhhh---hHHHHHHHHHHhCCCeE
Confidence 68999999999999999864 4467899999999999999997 999999999999874 46889999999999999
Q ss_pred EEEEEeccCCCCCCcccEEEEEEEcCCCCC
Q psy13720 374 TFGTLQAGHFGVSQTRRRAIVLAAAPGEVL 403 (487)
Q Consensus 374 ~~~~l~a~~yGvPQ~R~R~fiia~~~~~~~ 403 (487)
.+.+|||++|||||+|+|+||||.+.+..+
T Consensus 144 ~~~vl~a~~~GvPQ~R~R~fiva~r~~~~~ 173 (333)
T 4h0n_A 144 QEFLLCPSTVGVPNSRLRYYCTARRNNLTW 173 (333)
T ss_dssp EEEEECTTTTTCSCCCCEEEEEEEETTSCC
T ss_pred EEEEecHHHcCCCccceEEEEEEEeCCCCC
Confidence 999999999999999999999999988653
No 8
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=100.00 E-value=7.2e-43 Score=352.41 Aligned_cols=176 Identities=20% Similarity=0.306 Sum_probs=155.4
Q ss_pred CCCCeEeecccCchHHHHHHhhcCC-CcEE-EEEcCcHHHHHHHHHhCCCCceeccchHHHHHHhhchhhhccccccCCC
Q psy13720 215 ARPLRCLEVFAGAGGLSRGLDKSGV-ARST-WAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPR 292 (487)
Q Consensus 215 ~~~l~~ldLFsG~Gg~s~Gl~~aG~-~~~~-~a~e~~~~a~~t~~~N~p~~~~~~~di~~~~~~~~~~~~~~~~~~~~p~ 292 (487)
+++++++|||||+||+++||++||+ .+++ +|+|+|+.|++||++|||++ ++++||.++... .+|.
T Consensus 8 ~~~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~-~~~~DI~~~~~~------------~i~~ 74 (327)
T 3qv2_A 8 QKQVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEE-VQVKNLDSISIK------------QIES 74 (327)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCC-CBCCCTTTCCHH------------HHHH
T ss_pred CCCCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCC-cccCChhhcCHH------------Hhcc
Confidence 3679999999999999999999996 5899 99999999999999999987 778898765211 1111
Q ss_pred CCcccEEEccCCCcCc--ccCCccCCcccccchhHHHHHHHH-Hhhhc--CCcEEEEecCcchhcccchhHHHHHHHHHH
Q psy13720 293 KGEVEMLCGGPPCQGF--SGMNRFNQRQYSAFKNSLIVSYLS-YCDYY--RPRFFLLENVRNFVAFKNSMVLKMTMRCLT 367 (487)
Q Consensus 293 ~~~vd~i~ggpPCq~f--S~~~~~~~~~~~d~r~~L~~~~l~-~v~~~--~P~~~ilENV~gl~~~~~~~~~~~i~~~l~ 367 (487)
.++|+|+||||||+| |.+|+. ++.+|.|+.|+.++++ +|+.+ +|++|+||||+||++. ..++.|++.|+
T Consensus 75 -~~~Dil~ggpPCQ~fs~S~ag~~--~~~~d~r~~L~~~~~r~~i~~~~~~P~~~~lENV~gl~~~---~~~~~i~~~l~ 148 (327)
T 3qv2_A 75 -LNCNTWFMSPPCQPYNNSIMSKH--KDINDPRAKSVLHLYRDILPYLINKPKHIFIENVPLFKES---LVFKEIYNILI 148 (327)
T ss_dssp -TCCCEEEECCCCTTCSHHHHTTT--CTTTCGGGHHHHHHHHTTGGGCSSCCSEEEEEECGGGGGS---HHHHHHHHHHH
T ss_pred -CCCCEEEecCCccCcccccCCCC--CCCccccchhHHHHHHHHHHHhccCCCEEEEEchhhhcCh---HHHHHHHHHHH
Confidence 268999999999999 999864 3457899999999999 99999 9999999999999863 57899999999
Q ss_pred hCCCeeEEEEEeccCCCCCCcccEEEEEEEcCCCCCCCCCCCCcc
Q psy13720 368 QIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTV 412 (487)
Q Consensus 368 ~~GY~~~~~~l~a~~yGvPQ~R~R~fiia~~~~~~~p~~P~pth~ 412 (487)
++||++.+.+|||.+||+||+|+|+||||.+++ ..||.|+|.
T Consensus 149 ~~GY~v~~~vl~a~~yGvPQ~R~R~fivg~r~~---f~fP~~~~~ 190 (327)
T 3qv2_A 149 KNQYYIKDIICSPIDIGIPNSRTRYYVMARLTP---FKNEIQLHQ 190 (327)
T ss_dssp HTTCEEEEEEECGGGGTCSBCCCEEEEEEESSC---CCSCCCCCC
T ss_pred hCCCEEEEEEEeHHHcCCCccceEEEEEEEeCC---CCCCCcccc
Confidence 999999999999999999999999999999988 578888885
No 9
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=100.00 E-value=4.6e-41 Score=342.42 Aligned_cols=177 Identities=25% Similarity=0.461 Sum_probs=140.3
Q ss_pred CCeEeecccCchHHHHHHhhcCC-CcEEEEEcCcHHHHHHHHHhCCCCceeccchHHHHHHhhchhhhccccccCCCCCc
Q psy13720 217 PLRCLEVFAGAGGLSRGLDKSGV-ARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGE 295 (487)
Q Consensus 217 ~l~~ldLFsG~Gg~s~Gl~~aG~-~~~~~a~e~~~~a~~t~~~N~p~~~~~~~di~~~~~~~~~~~~~~~~~~~~p~~~~ 295 (487)
+++++|||||+||+++||+++|+ +++++|+|+|+.|++||++||+++.++++||.++... + ++ ..+
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~~~~~~~Di~~~~~~----~--------~~-~~~ 68 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLE----E--------FD-RLS 68 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECSCGGGCCHH----H--------HH-HHC
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccccccccCCHHHccHh----H--------cC-cCC
Confidence 57899999999999999999994 2799999999999999999999988889999865211 0 11 015
Q ss_pred ccEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhhcC--CcEEEEecCcchhcccchhHHHHHHHHHHhCCCee
Q psy13720 296 VEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR--PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQC 373 (487)
Q Consensus 296 vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~~~--P~~~ilENV~gl~~~~~~~~~~~i~~~l~~~GY~~ 373 (487)
+|+|+||||||+||.+|+. ++.+|.|+.|+.+++++|+.++ |++|+||||+||++. ..++.+++.|.++||++
T Consensus 69 ~D~l~~gpPCq~fS~ag~~--~g~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~l~~~---~~~~~i~~~l~~~GY~v 143 (343)
T 1g55_A 69 FDMILMSPPCQPFTRIGRQ--GDMTDSRTNSFLHILDILPRLQKLPKYILLENVKGFEVS---STRDLLIQTIENCGFQY 143 (343)
T ss_dssp CSEEEECCC--------------------CHHHHHHHHGGGCSSCCSEEEEEEETTGGGS---HHHHHHHHHHHHTTEEE
T ss_pred cCEEEEcCCCcchhhcCCc--CCccCccchHHHHHHHHHHHhcCCCCEEEEeCCccccCH---HHHHHHHHHHHHCCCee
Confidence 8999999999999999864 3457889999999999999999 999999999999853 57899999999999999
Q ss_pred EEEEEeccCCCCCCcccEEEEEEEcCCCCCCCCCCCCcc
Q psy13720 374 TFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTV 412 (487)
Q Consensus 374 ~~~~l~a~~yGvPQ~R~R~fiia~~~~~~~p~~P~pth~ 412 (487)
.+.+|||.+||+||+|+|+||||.+.+..+ .+|.|+|.
T Consensus 144 ~~~vl~a~~~GvPQ~R~R~~iv~~~~~~~~-~~p~~~~~ 181 (343)
T 1g55_A 144 QEFLLSPTSLGIPNSRLRYFLIAKLQSEPL-PFQAPGQV 181 (343)
T ss_dssp EEEEECGGGGTCSCCCCEEEEEEEESSSCC-TTCCTTCE
T ss_pred EEEEEEHHHCCCCCcccEEEEEEEeCCCCC-CCCCCcch
Confidence 999999999999999999999999987653 67888774
No 10
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=100.00 E-value=1.7e-41 Score=350.60 Aligned_cols=190 Identities=18% Similarity=0.233 Sum_probs=157.9
Q ss_pred CCCeEeecccCchHHHHHHhhcCC-CcE----EEEEcCcHHHHHHHHHhCCCCcee---------------------ccc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGV-ARS----TWAIEFDSAAATAFKMNNPGCTVF---------------------VDD 269 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~-~~~----~~a~e~~~~a~~t~~~N~p~~~~~---------------------~~d 269 (487)
++++++|||||+||+++||+++|+ .++ ++|+|+|+.|++||++||+..... ..+
T Consensus 9 ~~lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~~~~~~~~~~~~~~l~~~s~d~k~~~~~~~ 88 (403)
T 4dkj_A 9 KVIKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHSKNFNPKIERLDRDILSISNDSKMPISEYG 88 (403)
T ss_dssp EEEEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHCSSCCCCCBCCCTTCCCCBSSSSSCCCHHH
T ss_pred ccceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcCCCcccchhhhhhhhhhccccccccccccc
Confidence 679999999999999999999994 367 999999999999999999874210 011
Q ss_pred hHHH----HHHh---------hchhhhccccccCCCCCcccEEEccCCCcCcccCCccCCccccc---chhHHHHHHHHH
Q psy13720 270 CNKI----LQRV---------IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSA---FKNSLIVSYLSY 333 (487)
Q Consensus 270 i~~~----~~~~---------~~~~~~~~~~~~~p~~~~vd~i~ggpPCq~fS~~~~~~~~~~~d---~r~~L~~~~l~~ 333 (487)
+..+ +..+ ..+|+.+.....+| +.+|+|+||||||+||.+|+.+ +.+| .|+.|+++++++
T Consensus 89 i~~l~~~~l~~i~~~~~~~~~~~~DI~~i~~~~ip--~~vDll~ggpPCQ~fS~ag~~~--g~~d~~~~r~~L~~~~~ri 164 (403)
T 4dkj_A 89 IKKINNTIKASYLNYAKKHFNNLFDIKKVNKDNFP--KNIDIFTYSFPCQDLSVQGLQK--GIDKELNTRSGLLWEIERI 164 (403)
T ss_dssp HHHHTTBHHHHHHHHHHHHSCBCCCGGGCCTTTSC--SSCSEEEECCCCTTTCTTSCCC--CCCGGGCCSGGGHHHHHHH
T ss_pred cccccHHHHHHHHhhcccCCCcccchhhcCHhhCC--CCCcEEEEeCCCCCHHHhCCCC--CCCccccccchhHHHHHHH
Confidence 1111 0111 22556665556665 3689999999999999999643 3344 899999999999
Q ss_pred hhh--------cCCcEEEEecCcchhcccchhHHHHHHHHHHhCCCeeEEEEEeccCCCCCCcccEEEEEEEcCCCCCCC
Q psy13720 334 CDY--------YRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPK 405 (487)
Q Consensus 334 v~~--------~~P~~~ilENV~gl~~~~~~~~~~~i~~~l~~~GY~~~~~~l~a~~yGvPQ~R~R~fiia~~~~~~~p~ 405 (487)
|+. .+|++|+||||+||++.+++..++.+++.|+++||++.+.+|||++|||||+|+|+||||.+++ +.
T Consensus 165 i~~~~~k~~~~~~Pk~~l~ENV~gl~~~~~~~~~~~i~~~l~~~GY~v~~~vl~a~~~GvPQ~R~R~fiva~r~~---f~ 241 (403)
T 4dkj_A 165 LEEIKNSFSKEEMPKYLLMENVKNLLSHKNKKNYNTWLKQLEKFGYKSKTYLLNSKNFDNCQNRERVFCLSIRDD---YL 241 (403)
T ss_dssp HHHHHHHSCGGGSCSEEEEEEEGGGGSHHHHHHHHHHHHHHHHTTEEEEEEEEEGGGTTCSBCCEEEEEEEEEHH---HH
T ss_pred HHHhhhhhccccCCCEEEEecchhhhhhccchHHHHHHHHHHhCCCeEEEEEecHHHcCCCccceEEEEEEEcCC---CC
Confidence 998 8999999999999999888889999999999999999999999999999999999999999988 56
Q ss_pred CCCCCcc
Q psy13720 406 YPEPWTV 412 (487)
Q Consensus 406 ~P~pth~ 412 (487)
||+|+|.
T Consensus 242 fP~~~~~ 248 (403)
T 4dkj_A 242 EKTGFKF 248 (403)
T ss_dssp HHHCCCC
T ss_pred CCCcccc
Confidence 7888874
No 11
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=100.00 E-value=4.7e-41 Score=354.01 Aligned_cols=183 Identities=26% Similarity=0.495 Sum_probs=148.6
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhC---CCCceeccchHHHHHHhh----chhhhccccc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN---PGCTVFVDDCNKILQRVI----DNEVCDDKKQ 288 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~---p~~~~~~~di~~~~~~~~----~~~~~~~~~~ 288 (487)
.+++++||||||||+++||+++|+ ++++|+|+|+.|++||++|| |++.++++||.++..... ..+.......
T Consensus 87 ~~~~viDLFaG~GGlslG~~~aG~-~~v~avE~d~~A~~ty~~N~~~~p~~~~~~~DI~~i~~~~~~~~~~~~~~~~i~~ 165 (482)
T 3me5_A 87 YAFRFIDLFAGIGGIRRGFESIGG-QCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIRDITLSHQEGVSDEAAAEHIRQ 165 (482)
T ss_dssp CSEEEEEESCTTSHHHHHHHTTTE-EEEEEECCCHHHHHHHHHHSCCCTTTCEEESCTHHHHCTTCTTSCHHHHHHHHHH
T ss_pred ccceEEEecCCccHHHHHHHHCCC-EEEEEEeCCHHHHHHHHHhcccCCCcceeccchhhhhhccccccchhhHHhhhhh
Confidence 579999999999999999999998 89999999999999999999 778889999998742110 0000011111
Q ss_pred cCCCCCcccEEEccCCCcCcccCCccCCc------c-cccchhHHHHHHHHHhhhcCCcEEEEecCcchhcccchhHHHH
Q psy13720 289 KLPRKGEVEMLCGGPPCQGFSGMNRFNQR------Q-YSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKM 361 (487)
Q Consensus 289 ~~p~~~~vd~i~ggpPCq~fS~~~~~~~~------~-~~d~r~~L~~~~l~~v~~~~P~~~ilENV~gl~~~~~~~~~~~ 361 (487)
.+| ++|||+||||||+||.+|+.+.. + ..|.|+.|+++++++|+.++|++|+||||+||++.+++..++.
T Consensus 166 ~~~---~~Dvl~gGpPCQ~FS~AG~~k~~~~g~~~G~~~D~R~~Lf~e~~riI~~~rPk~fvlENV~gl~s~~~g~~f~~ 242 (482)
T 3me5_A 166 HIP---EHDVLLAGFPCQPFSLAGVSKKNSLGRAHGFACDTQGTLFFDVVRIIDARRPAMFVLENVKNLKSHDKGKTFRI 242 (482)
T ss_dssp HSC---CCSEEEEECCCCCC------------------CTTTTSHHHHHHHHHHHHCCSEEEEEEETTTTTGGGGHHHHH
T ss_pred cCC---CCCEEEecCCCcchhhhCcccccccccccccccCccccHHHHHHHHHHHcCCcEEEEeCcHHHhcccCCcHHHH
Confidence 233 79999999999999999864321 1 1378999999999999999999999999999999888899999
Q ss_pred HHHHHHhCCCeeE---------EEEEeccCCCCCCcccEEEEEEEcCCCCC
Q psy13720 362 TMRCLTQIGYQCT---------FGTLQAGHFGVSQTRRRAIVLAAAPGEVL 403 (487)
Q Consensus 362 i~~~l~~~GY~~~---------~~~l~a~~yGvPQ~R~R~fiia~~~~~~~ 403 (487)
|++.|.++||.+. +.+|||.+| |||+|+|+||||.+++..+
T Consensus 243 i~~~L~~lGY~v~~~~~~g~~~~~vlnA~~~-vPQ~R~R~fivg~r~~~~~ 292 (482)
T 3me5_A 243 IMQTLDELGYDVADAEDNGPDDPKIIDGKHF-LPQHRERIVLVGFRRDLNL 292 (482)
T ss_dssp HHHHHHHTTEEETTTTCCSTTCTTEEEGGGT-SSBCCEEEEEEEEEGGGCC
T ss_pred HHHHHhcCCcEEEeccccCcccceeeecccc-CCccceEEEEEEEecCccc
Confidence 9999999999996 679999999 9999999999999987643
No 12
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=100.00 E-value=3.4e-37 Score=306.58 Aligned_cols=162 Identities=22% Similarity=0.328 Sum_probs=133.7
Q ss_pred CCCCeEeecccCchHHHHHHhhcCCCcE--EEEEcCcHHHHHHHHHhCCCCceeccchHHHHHHhhchhhhccccccCCC
Q psy13720 215 ARPLRCLEVFAGAGGLSRGLDKSGVARS--TWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPR 292 (487)
Q Consensus 215 ~~~l~~ldLFsG~Gg~s~Gl~~aG~~~~--~~a~e~~~~a~~t~~~N~p~~~~~~~di~~~~~~~~~~~~~~~~~~~~p~ 292 (487)
+.+++++|||||+||+++||+++|+ ++ ++|+|+|+.|++||++|||++.++.+||.++... + ++.
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~aG~-~~~~v~a~E~d~~a~~ty~~N~~~~~~~~~DI~~i~~~----~--------i~~ 80 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDLGI-QVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVTQK----H--------IQE 80 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHTTB-CEEEEEEECCCHHHHHHHHHHTTTCEEEECCGGGCCHH----H--------HHH
T ss_pred CCCCEEEEeCcCccHHHHHHHHCCC-ccceEEEEECCHHHHHHHHHhCCCCceeCCChHHccHH----H--------hcc
Confidence 3789999999999999999999998 67 8999999999999999999988889999876321 1 112
Q ss_pred CCcccEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhhcCCc-------EEEEecCcchhcccchhHHHHHHHH
Q psy13720 293 KGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPR-------FFLLENVRNFVAFKNSMVLKMTMRC 365 (487)
Q Consensus 293 ~~~vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~~~P~-------~~ilENV~gl~~~~~~~~~~~i~~~ 365 (487)
.+++|+|+||||||+||.+|+.+ ++.+|.|+.|+.+++++|+.++|+ +|+||||+||++.+++ .+.+.
T Consensus 81 ~~~~Dll~ggpPCQ~fS~ag~~r-~g~~d~r~~L~~~~~rii~~~~P~~~~~~P~~~l~ENV~gl~~~~~~----~~~~~ 155 (295)
T 2qrv_A 81 WGPFDLVIGGSPCNDLSIVNPAR-KGLYEGTGRLFFEFYRLLHDARPKEGDDRPFFWLFENVVAMGVSDKR----DISRF 155 (295)
T ss_dssp TCCCSEEEECCCCGGGBTTCTTC-CTTTSTTTTHHHHHHHHHHHHSCCTTCCCCCEEEEEEESSBCHHHHH----HHHHH
T ss_pred cCCcCEEEecCCCccccccCccc-cccccccchhHHHHHHHHHHhCcccccCCccEEEEEcCcchhhcCcc----HHHHH
Confidence 24799999999999999998422 345788999999999999999999 9999999999876432 23333
Q ss_pred HHhCCCeeEEEEEeccCCCCCCcccEEEEEEEcCCC
Q psy13720 366 LTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGE 401 (487)
Q Consensus 366 l~~~GY~~~~~~l~a~~yGvPQ~R~R~fiia~~~~~ 401 (487)
|+ . .+.+|||.+|| ||+|+|+|| |.+++.
T Consensus 156 l~-~----~~~vl~a~~~~-PQ~R~R~~i-~~~~~~ 184 (295)
T 2qrv_A 156 LE-S----NPVMIDAKEVS-AAHRARYFW-GNLPGM 184 (295)
T ss_dssp HT-S----CCCCEEGGGTS-SBCCEEEEE-ECCTTS
T ss_pred Hh-c----CcEEeecceEC-CccCcEEEE-EEecCc
Confidence 43 2 45789999996 999999998 776543
No 13
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=99.96 E-value=5.3e-30 Score=257.87 Aligned_cols=147 Identities=18% Similarity=0.248 Sum_probs=112.8
Q ss_pred CCCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCCCCceeccchHHHHHHhhchhhhccccccCCCCC
Q psy13720 215 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKG 294 (487)
Q Consensus 215 ~~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p~~~~~~~di~~~~~~~~~~~~~~~~~~~~p~~~ 294 (487)
+++++++|||||+|| ||++||| ++ ++|||+..++.+||.++... + ++..+
T Consensus 187 ~~~ikvidLFaGiGg---Gl~~aGf-~v--------------~~N~~~~~~~~~DI~~i~~~----~--------i~~~~ 236 (386)
T 2pv0_B 187 RQPVRVLSLFEDIKK---ELTSLGF-LE--------------SGSDPGQLKHVVDVTDTVRK----D--------VEEWG 236 (386)
T ss_dssp CCCCCEEEESSCCHH---HHHHTTS-SC--------------SSCCSCSEEEESCCTTCCHH----H--------HHHSC
T ss_pred hcCceeeEEeccCCh---hHhhcCc-cH--------------HHcCCCCcEEeCChhhCCHh----H--------hcccC
Confidence 367999999999997 9999998 54 58999877778898765211 1 11123
Q ss_pred cccEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhhcCCc-------EEEEecCcchhcccchhHHHHHHHHHH
Q psy13720 295 EVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPR-------FFLLENVRNFVAFKNSMVLKMTMRCLT 367 (487)
Q Consensus 295 ~vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~~~P~-------~~ilENV~gl~~~~~~~~~~~i~~~l~ 367 (487)
++|||+||||||+||.++ .|+.|+.+|+|+|++++|+ +|+||||+||.+.. + ..+.+.|
T Consensus 237 ~~DlliGG~PCQ~FS~A~---------~Rg~Lf~ef~Riv~~~rPk~~~~~P~~fv~ENV~gL~~~~-~---~~i~~~L- 302 (386)
T 2pv0_B 237 PFDLVYGATPPLGHTCDR---------PPSWYLFQFHRLLQYARPKPGSPGPFFWMFVDNLVLNKED-L---DVASRFL- 302 (386)
T ss_dssp CCSEEEEECCCTTTCSCS---------CTHHHHHHHHHHHHHHSCCSSCCSCCEEEEEECSCSCHHH-H---HHHHHHT-
T ss_pred CCCEEEECCCCCcccccC---------CcchHHHHHHHHHHHhCCCcccCCCcEEEEEechhhhhcc-h---HHHHHHH-
Confidence 799999999999999985 3679999999999999998 99999999996432 2 2333333
Q ss_pred hCCCeeEEEEEeccCCCCCCcccEEEEEEEcCCCCCCCCCCCCcc
Q psy13720 368 QIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTV 412 (487)
Q Consensus 368 ~~GY~~~~~~l~a~~yGvPQ~R~R~fiia~~~~~~~p~~P~pth~ 412 (487)
+ +.+.+|||++|||||+|+| +||.+++... .++.|+|.
T Consensus 303 ~----v~~~VLnA~dyGVPQrRrR--f~g~~~~~~~-~~~~p~~~ 340 (386)
T 2pv0_B 303 E----MEPVTIPDVHGGSLQNAVR--VWSNIPAIRS-RHWALVSE 340 (386)
T ss_dssp T----SCCCEEECCCSSSCCCEEE--EEECSSSSST-TCCTTSCH
T ss_pred c----CCeEEEEccccCccccccE--EEEECCCcCC-cCCCCcCc
Confidence 2 5667999999999999999 5687766442 34556653
No 14
>2qrv_B DNA (cytosine-5)-methyltransferase 3-like; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=99.96 E-value=6.6e-30 Score=241.32 Aligned_cols=146 Identities=17% Similarity=0.251 Sum_probs=102.3
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCCCCceeccchHHHHHHhhchhhhccccccCCCCCc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGE 295 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p~~~~~~~di~~~~~~~~~~~~~~~~~~~~p~~~~ 295 (487)
++++++|||||+|| ||+++|+ ++ +.||++..++.+||.++... + ++..++
T Consensus 32 ~~~~vidLFaGig~---Gl~~aGf-~~--------------~~N~~~~~~~~~DI~~i~~~----~--------i~~~~~ 81 (230)
T 2qrv_B 32 QPVRVLSLFEDIKK---ELTSLGF-LE--------------SGSDPGQLKHVVDVTDTVRK----D--------VEEWGP 81 (230)
T ss_dssp CCCCEEEESSCCTT---TTTTTTS-CC-------------------CCEEEESCCTTCCHH----H--------HHHTCC
T ss_pred CCceEEEeccChhH---HHHHCCC-ch--------------hhcCCCCcEecCChhhCCHh----H--------hcccCC
Confidence 67899999999998 8999998 54 47898877788998865211 1 111247
Q ss_pred ccEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhhcCCc-------EEEEecCcchhcccchhHHHHHHHHHHh
Q psy13720 296 VEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPR-------FFLLENVRNFVAFKNSMVLKMTMRCLTQ 368 (487)
Q Consensus 296 vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~~~P~-------~~ilENV~gl~~~~~~~~~~~i~~~l~~ 368 (487)
+|||+||||||+||.+|. |+.|+.+|+|+|++++|+ +|+||||+||++... ..+.+.| +
T Consensus 82 ~DlliGG~PCQ~FS~ag~---------rg~Lf~ef~Riv~~~rPk~~~~~P~~fv~ENV~gL~~~~~----~~i~~~l-~ 147 (230)
T 2qrv_B 82 FDLVYGATPPLGHTCDRP---------PSWYLFQFHRLLQYARPKPGSPRPFFWMFVDNLVLNKEDL----DVASRFL-E 147 (230)
T ss_dssp CSEEEEECCCTTTSSCSC---------THHHHHHHHHHHHHHCCCSSCCSCCEEEEEECSCSCHHHH----HHHHHHH-T
T ss_pred CCEEEECCCCCcccccCC---------CchHHHHHHHHHHHHCcCcccCCCcEEEEeccHHhhhccH----HHHHHHH-c
Confidence 999999999999999872 679999999999999999 899999999976432 2333333 3
Q ss_pred CCCeeEEEEEeccCCCCCCcccEEEEEEEcCCCCCCCCCCCCcc
Q psy13720 369 IGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTV 412 (487)
Q Consensus 369 ~GY~~~~~~l~a~~yGvPQ~R~R~fiia~~~~~~~p~~P~pth~ 412 (487)
. .+.+|||.+||+||+| |+| ||.+++... .+..|+|.
T Consensus 148 ~----~~~vLnA~dfgvpQrR-r~f-~g~~~~~~~-~~~~p~~~ 184 (230)
T 2qrv_B 148 M----EPVTIPDVHGGSLQNA-VRV-WSNIPAIRS-RHWALVSE 184 (230)
T ss_dssp S----CCEECCCCCSCC-----CEE-EECSTTSST-TCCSCSCH
T ss_pred C----CcEEEEcccCCcCccc-EEE-EeecCCCCc-cccCCcCh
Confidence 3 4568999999999999 444 477665432 33445553
No 15
>1w4s_A Polybromo, polybromo 1 protein; BAH, bromo-associated homology domain, chromatin remodelling, PBAF, SWI/SNF-B, RSC, nuclear protein; 1.55A {Gallus gallus}
Probab=99.95 E-value=1e-27 Score=220.54 Aligned_cols=130 Identities=22% Similarity=0.324 Sum_probs=99.5
Q ss_pred CeEeEEEEcCeEEeeCCeEEeCCCccccccCCccccccCCCCCCCCccchhhhcccCCceeccCCCCCCCceEEEEEEEE
Q psy13720 1 LYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIF 80 (487)
Q Consensus 1 ~~y~~v~~~g~~y~vGD~V~v~p~~~~~~~~~~~~~~~~~~~~~de~~~~e~~r~~~~~~~~~~~~~~~P~~IgrI~~i~ 80 (487)
.||+++.++|++|+|||||||.+++ .++|+|||+|.+||
T Consensus 15 ~~y~~~~~~g~~~~vGD~V~v~~~~-----------------------------------------~~~~p~I~rI~~i~ 53 (174)
T 1w4s_A 15 TYSQDCSFKNSMYHVGDYVYVEPAE-----------------------------------------ANLQPHIVCIERLW 53 (174)
T ss_dssp -----------CCCTTCEEEECCSS-----------------------------------------TTSCCEEEEEEEEE
T ss_pred EEeEEEEECCEEEECCCEEEEeCCC-----------------------------------------CCCCCEEEEEEEEE
Confidence 4899999999999999999998876 35677999999999
Q ss_pred ecCCCCCCCCCceEEEEEeeeccccCCCCccccccCCCceEEecccceeecccceeeeeEEEeecCCcccccccccCCCC
Q psy13720 81 KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPH 160 (487)
Q Consensus 81 ~~~~~~~~~~~~~~v~v~wfyRp~dt~~~~~~~~~~d~reLF~S~~~d~vp~~~I~GKC~V~~~~~~~~~~~~~~~~~~d 160 (487)
++.+ ++++++|+|||||+||.+.... .+.+||||+|++.+++|+++|.|||.|++.++......... ...+
T Consensus 54 ~~~~------g~~~v~v~WfyRPeet~~~~~~--~~~~~EvF~S~~~d~~~~~~I~gkC~V~~~~~~~~~~p~~~-~~~d 124 (174)
T 1w4s_A 54 EDSA------GEKWLYGCWFYRPNETFHLATR--KFLEKEVFKSDYYNKVPVSKILGKCVVMFVKEYFKLCPENF-RDED 124 (174)
T ss_dssp ECTT------CCEEEEEEEEECGGGSCCCTTC--EEETTEEEEEEEEEEEEGGGEEEEEEEEEHHHHTTEEETTC-CGGG
T ss_pred EcCC------CCEEEEEEEecCHHHcccccCC--cCCCCeeEEeCCcceecHHHeeeeEEEEECchhhhcCcCCC-CCCC
Confidence 9876 7899999999999999765433 35699999999999999999999999999987654321111 2347
Q ss_pred eeEEEEeecCCCCccccCch
Q psy13720 161 RFYFNEAYNSKTEEFTNLPT 180 (487)
Q Consensus 161 ~Fy~~~~Yd~~~~~f~~~P~ 180 (487)
.|||++.||+.+++|..++.
T Consensus 125 vF~c~~~Yd~~~~~f~~i~~ 144 (174)
T 1w4s_A 125 VYVCESRYSAKTKSFKKIKL 144 (174)
T ss_dssp EEEEEEEEETTTTEEEECSS
T ss_pred EEEEeEEEccccCeEccCcc
Confidence 89999999999999987764
No 16
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=99.89 E-value=5.1e-23 Score=231.88 Aligned_cols=129 Identities=19% Similarity=0.324 Sum_probs=111.0
Q ss_pred CeEeEEEEcCeEEeeCCeEEeCCCccccccCCccccccCCCCCCCCccchhhhcccCCceeccCCCCCCCceEEEEEEEE
Q psy13720 1 LYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIF 80 (487)
Q Consensus 1 ~~y~~v~~~g~~y~vGD~V~v~p~~~~~~~~~~~~~~~~~~~~~de~~~~e~~r~~~~~~~~~~~~~~~P~~IgrI~~i~ 80 (487)
.||+++.++|+.|+|||||||.+++ +..|+|||+|++||
T Consensus 147 ~~Y~s~~v~g~~i~VGD~V~v~~~d-----------------------------------------~~~ppyIarIe~m~ 185 (1002)
T 3swr_A 147 SYYKKVCIDAETLEVGDCVSVIPDD-----------------------------------------SSKPLYLARVTALW 185 (1002)
T ss_dssp EECSEEEETTEEEETTCEEEECBSS-----------------------------------------TTSCCEEEEEEEEE
T ss_pred eeeeEEEECCEEEecCCEEEEecCC-----------------------------------------CCCCceEEEEEEEe
Confidence 3899999999999999999999877 56788999999999
Q ss_pred ecCCCCCCCCCceEEEEEeeeccccCCCCccccccCCCceEEecccceeecccceeeeeEEEeecCCccccc--------
Q psy13720 81 KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTD-------- 152 (487)
Q Consensus 81 ~~~~~~~~~~~~~~v~v~wfyRp~dt~~~~~~~~~~d~reLF~S~~~d~vp~~~I~GKC~V~~~~~~~~~~~-------- 152 (487)
++.+ +.+||||+|||||+||+++.. ++++|||+|++|+++|+++|.|||.|++.+...++-.
T Consensus 186 ed~~------g~k~~~v~Wf~rp~ET~lg~~----~~~~ElFlsd~cd~~~l~~I~gkc~V~~~~~~~~w~~~~~~~~~~ 255 (1002)
T 3swr_A 186 EDSS------NGQMFHAHWFCAGTDTVLGAT----SDPLELFLVDECEDMQLSYIHSKVKVIYKAPSENWAMEGGMDPES 255 (1002)
T ss_dssp EETT------TEEEEEEEEEEEGGGSTTGGG----SCTTEEEEEEEEEEEEGGGEEEEECEEECCCCTTGGGCTTCCCCC
T ss_pred ecCC------CCeEEEEEEEecchhcccccC----CCCCceEeeccccCCcHHHhceeeEEEEccCCcchhhhccccccc
Confidence 9987 779999999999999988776 8999999999999999999999999999865111100
Q ss_pred ccccCCCCeeEEEEeecCCCCccccCch
Q psy13720 153 RWSSRGPHRFYFNEAYNSKTEEFTNLPT 180 (487)
Q Consensus 153 ~~~~~~~d~Fy~~~~Yd~~~~~f~~~P~ 180 (487)
.-...++++|||++.||+.+++|.+||.
T Consensus 256 ~~~~~~~~~ffc~~~Y~~~~~~F~~lp~ 283 (1002)
T 3swr_A 256 LLEGDDGKTYFYQLWYDQDYARFESPPK 283 (1002)
T ss_dssp SCCCCCCTSEEEEEEEETTTTEEECCCC
T ss_pred ccccCCCCeEEEEEEECCCCCcccCCCh
Confidence 0111236899999999999999999885
No 17
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=99.87 E-value=4.2e-22 Score=229.36 Aligned_cols=129 Identities=22% Similarity=0.352 Sum_probs=107.9
Q ss_pred CeEeEEEEcCeEEeeCCeEEeCCCccccccCCccccccCCCCCCCCccchhhhcccCCceeccCCCCCCCceEEEEEEEE
Q psy13720 1 LYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIF 80 (487)
Q Consensus 1 ~~y~~v~~~g~~y~vGD~V~v~p~~~~~~~~~~~~~~~~~~~~~de~~~~e~~r~~~~~~~~~~~~~~~P~~IgrI~~i~ 80 (487)
.||+++.++|+.|+|||||||.+++ +++|+|||+|++||
T Consensus 458 ~~Y~~~~v~g~~~~vGD~V~v~~~d-----------------------------------------~~~p~yiarIe~iw 496 (1330)
T 3av4_A 458 TYYQKVSIDEEMLEVGDCVSVIPDD-----------------------------------------SSKPLYLARVTALW 496 (1330)
T ss_dssp EEECSEEEESSEEETTCEEEECBCC-----------------------------------------SSCCCEEEEEEEEE
T ss_pred eeeeEEEECCEEEecCCEEEEeCCC-----------------------------------------CCCCCEEEEEeeee
Confidence 4899999999999999999998766 46688999999999
Q ss_pred ecCCCCCCCCCceEEEEEeeeccccCCCCccccccCCCceEEecccceeecccceeeeeEEEeecCCccc-------ccc
Q psy13720 81 KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQIS-------TDR 153 (487)
Q Consensus 81 ~~~~~~~~~~~~~~v~v~wfyRp~dt~~~~~~~~~~d~reLF~S~~~d~vp~~~I~GKC~V~~~~~~~~~-------~~~ 153 (487)
++.+ +..+|||+|||||+||+++.. ++++|||+|++++++|+++|.|||.|++.++..+. ++.
T Consensus 497 e~~d------g~~~~~~~WfyRp~ETvlg~~----~~~rElFlS~~~d~~~l~~I~gKC~V~~~~~~~~~~~~~~~~~~~ 566 (1330)
T 3av4_A 497 EDKN------GQMMFHAHWFCAGTDTVLGAT----SDPLELFLVGECENMQLSYIHSKVKVIYKAPSENWAMEGGTDPET 566 (1330)
T ss_dssp EETT------CCEEEEEEEEEEGGGSTTGGG----SCTTEEEEEEEEEEEEGGGEEEEECEEECCCCTTSTTCCC-----
T ss_pred ecCC------CCEEEEEEEEEchHHcccccc----cCCCeEEEecccccCcHHHhcceeEEEEeccchhhhhhcccCccc
Confidence 9987 788999999999999987764 89999999999999999999999999998752211 000
Q ss_pred --cccCCCCeeEEEEeecCCCCccccCch
Q psy13720 154 --WSSRGPHRFYFNEAYNSKTEEFTNLPT 180 (487)
Q Consensus 154 --~~~~~~d~Fy~~~~Yd~~~~~f~~~P~ 180 (487)
-.....++|||++.||+.+++|..+|.
T Consensus 567 ~~~~~~~~~~F~C~~~Yd~~~~~F~~lp~ 595 (1330)
T 3av4_A 567 TLPGAEDGKTYFFQLWYNQEYARFESPPK 595 (1330)
T ss_dssp --------CCEEEEEEEETTTTEEECCCC
T ss_pred cccccccCCceEEEeEECCccCccCCcCc
Confidence 001245789999999999999999886
No 18
>4dov_A ORC1, origin recognition complex subunit 1; DNA replication, replication; 1.70A {Mus musculus} PDB: 4dow_A*
Probab=99.71 E-value=2.9e-16 Score=138.79 Aligned_cols=129 Identities=14% Similarity=0.274 Sum_probs=98.8
Q ss_pred eEeEEEE--cC---eEEeeCCeEEeCCCccccccCCccccccCCCCCCCCccchhhhcccCCceeccCCCCCCCceEEEE
Q psy13720 2 YYNCVSY--EG---EQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYI 76 (487)
Q Consensus 2 ~y~~v~~--~g---~~y~vGD~V~v~p~~~~~~~~~~~~~~~~~~~~~de~~~~e~~r~~~~~~~~~~~~~~~P~~IgrI 76 (487)
+|+++.+ +| ..++|||+|+|.+++ ..+| |||+|
T Consensus 23 ~Y~~~~v~~~~~~~~~i~vGd~VLI~~~D-----------------------------------------~~~P-yVAki 60 (163)
T 4dov_A 23 MYREICMKINDGSEIHIKVGQFVLIQGED-----------------------------------------NKKP-YVAKL 60 (163)
T ss_dssp EESEEEEECTTSCEEEEETTCEEEECCSS-----------------------------------------SSCC-EEEEE
T ss_pred eeeEEEEecCCCCCeEEeeCCEEEEeCCc-----------------------------------------ccCC-hhHHH
Confidence 6787777 56 899999999998876 3455 99999
Q ss_pred EEEEecCCCCCCCCCceEEEEEeeeccccCCCCcccc--ccCCCceEEecccc---eeecccceeeeeEEEeecCCcccc
Q psy13720 77 VAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFT--YQLDLNKLYWSDEE---EQVSLSDVQGKCFVVCEDNLQIST 151 (487)
Q Consensus 77 ~~i~~~~~~~~~~~~~~~v~v~wfyRp~dt~~~~~~~--~~~d~reLF~S~~~---d~vp~~~I~GKC~V~~~~~~~~~~ 151 (487)
++|++... -+......+||||+|++++..+.... ...+.+|||++++. +.+++++|.|||.|+..+..+..+
T Consensus 61 ~~lye~~~---e~~~~k~A~VQWy~R~~EiP~~k~~l~g~~~~~qEIF~~d~~~~d~~I~aeTIi~~c~V~~~~~~e~~p 137 (163)
T 4dov_A 61 IELFQNGA---EVPPKKCARVQWFVRFLEIPVSKRHLLGRSPPAQEIFWYDCSDWDNKINVETIIGPVQVVALAPEEVIP 137 (163)
T ss_dssp EEEEEETT---SSSCEEEEEEEEEEEGGGSCTTTGGGGCSCCCTTEEEEECCSCSCCEEEGGGEEEEEEEEECCTTCCCC
T ss_pred HHHHhccc---cCCCceEEEEEeeechhhccccchhhccCCCCCCeEEEecCCCCcccccHHHeeeceEEEEcCCccccC
Confidence 99998621 02356779999999999996555331 12468899999887 489999999999999998665543
Q ss_pred cccccCCCCeeEEEEeecCCCCccccCc
Q psy13720 152 DRWSSRGPHRFYFNEAYNSKTEEFTNLP 179 (487)
Q Consensus 152 ~~~~~~~~d~Fy~~~~Yd~~~~~f~~~P 179 (487)
. .....+.||++..+|. +.|..|+
T Consensus 138 ~--~~~~e~t~FvklsWd~--k~f~pl~ 161 (163)
T 4dov_A 138 V--DQKSEETLFVKLSWNK--KDFAPLP 161 (163)
T ss_dssp S--SCCCCSEEEEEEEECS--SCEEECC
T ss_pred C--CcccceEEEEEEEecC--CcceeCC
Confidence 2 2245689999999984 4676654
No 19
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=98.84 E-value=3.4e-08 Score=99.49 Aligned_cols=160 Identities=18% Similarity=0.197 Sum_probs=110.1
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhC-----C--CCceeccchHHHHHHhhchhhhccccc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN-----P--GCTVFVDDCNKILQRVIDNEVCDDKKQ 288 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~-----p--~~~~~~~di~~~~~~~~~~~~~~~~~~ 288 (487)
+..++||||||.|++++.+...|. .+.++|+++.|++..+.|. . ...++++|+.+++.....
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~ga--~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~--------- 221 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAAGA--EVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREER--------- 221 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTC--EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHH---------
T ss_pred CCCcEEEcccccCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHh---------
Confidence 446899999999999999998885 6789999999999888774 2 256788898876532110
Q ss_pred cCCCCCcccEEEccCCCcCcccCCccCCcccccchhHHHHHHH-HHhhhcCCcEE-EEecCcchhcccchhHHHHH-HHH
Q psy13720 289 KLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYL-SYCDYYRPRFF-LLENVRNFVAFKNSMVLKMT-MRC 365 (487)
Q Consensus 289 ~~p~~~~vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l-~~v~~~~P~~~-ilENV~gl~~~~~~~~~~~i-~~~ 365 (487)
..+.+|+|+..|||.+.+..+.. . .... .+..++ .+.+.++|.-+ ++++...... ....+..+ .+.
T Consensus 222 ---~~~~fD~Ii~dPP~~~~~~~~~~----~-~~~~-~~~~ll~~~~~~LkpgG~lli~~~~~~~~--~~~~~~~~l~~a 290 (332)
T 2igt_A 222 ---RGSTYDIILTDPPKFGRGTHGEV----W-QLFD-HLPLMLDICREILSPKALGLVLTAYSIRA--SFYSMHELMRET 290 (332)
T ss_dssp ---HTCCBSEEEECCCSEEECTTCCE----E-EHHH-HHHHHHHHHHHTBCTTCCEEEEEECCTTS--CHHHHHHHHHHH
T ss_pred ---cCCCceEEEECCccccCCchHHH----H-HHHH-HHHHHHHHHHHhcCcCcEEEEEECCCCCC--CHHHHHHHHHHH
Confidence 01368999999999887743210 0 0011 122222 23456788754 7777665321 12234444 446
Q ss_pred HHhCCCeeEEEEEeccCCCCCCc-ccEEEEEEE
Q psy13720 366 LTQIGYQCTFGTLQAGHFGVSQT-RRRAIVLAA 397 (487)
Q Consensus 366 l~~~GY~~~~~~l~a~~yGvPQ~-R~R~fiia~ 397 (487)
+.++|+.+....+....+++||. +.|++.+|+
T Consensus 291 ~~~~g~~v~~~e~~~p~~~~~q~~~~r~lp~g~ 323 (332)
T 2igt_A 291 MRGAGGVVASGELVIREAGLDGKTPGRVLSTSL 323 (332)
T ss_dssp TTTSCSEEEEEEEEEECCCSSSCCCCCEEEEEE
T ss_pred HHHcCCeEEEEEEecccCCcccccCCceeeeEE
Confidence 67899999988899999999999 999887774
No 20
>2fl7_A Regulatory protein SIR3; ORC, silencing, chromatin, transcription; 1.85A {Saccharomyces cerevisiae} PDB: 2fvu_A 3tu4_K*
Probab=98.75 E-value=2.8e-08 Score=93.17 Aligned_cols=121 Identities=16% Similarity=0.120 Sum_probs=84.3
Q ss_pred EcCeEEeeCCeEEeCCCccccccCCccccccCCCCCCCCccchhhhcccCCceeccCCCCCCCceEEEEEEEEecCCCCC
Q psy13720 8 YEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKN 87 (487)
Q Consensus 8 ~~g~~y~vGD~V~v~p~~~~~~~~~~~~~~~~~~~~~de~~~~e~~r~~~~~~~~~~~~~~~P~~IgrI~~i~~~~~~~~ 87 (487)
.||.++++||+|.|..+. .+-|.++-|.+|-....
T Consensus 48 ~Dg~~~~~GDsVlv~~~~------------------------------------------~~sysv~LI~eIrl~t~--- 82 (232)
T 2fl7_A 48 SDGLSFGKGESVIFNDNV------------------------------------------TETYSVYLIHEIRLNTL--- 82 (232)
T ss_dssp TTCCEECTTCEEEEEETT------------------------------------------TTEEEEEEEEEEEC------
T ss_pred cCCcEEeCCCEEEEecCC------------------------------------------CCceEEEEEEEEEecCC---
Confidence 489999999999994322 22245666666644331
Q ss_pred CCCCceEEEEEeeeccccCCCC-----cccc--------cc--------CCCceEEecccceeecccceeeeeEEEeecC
Q psy13720 88 VSASDVFLTVKKFYRPENTHRS-----VEFT--------YQ--------LDLNKLYWSDEEEQVSLSDVQGKCFVVCEDN 146 (487)
Q Consensus 88 ~~~~~~~v~v~wfyRp~dt~~~-----~~~~--------~~--------~d~reLF~S~~~d~vp~~~I~GKC~V~~~~~ 146 (487)
..-+.+.|.||+|..|+... .... .. ...+|||+|.+.+.+-+.+|.++|+|...++
T Consensus 83 --~n~vei~v~wylR~~Ei~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~nELflTa~l~eI~l~diI~~anVls~~E 160 (232)
T 2fl7_A 83 --NNVVEIWVFSYLRWFELKPKLYYEQFRPDLIKEDHPLEFYKDKFFNEVNKSELYLTAELSEIWLKDFIAVGQILPESQ 160 (232)
T ss_dssp ----CCEEEEEEEECGGGSCHHHHHHHHCHHHHHTTCCHHHHHHHHHHHSCTTEEEEEEEEEEECGGGEEEECEEECTTT
T ss_pred --CceEEEEEEEeecHHHcCchhhhhhcCchhcccccchhhhhhhhhcccccceEEEeccHHHHHHHhhhhheEeccHHH
Confidence 14677999999999998420 0111 22 6889999999999999999999999999887
Q ss_pred CcccccccccCCCCeeEEEEeecCCCCcccc
Q psy13720 147 LQISTDRWSSRGPHRFYFNEAYNSKTEEFTN 177 (487)
Q Consensus 147 ~~~~~~~~~~~~~d~Fy~~~~Yd~~~~~f~~ 177 (487)
......+ ......|||++.+|+....|..
T Consensus 161 f~~l~~d--~~~~~tFf~R~~cd~~~~~f~~ 189 (232)
T 2fl7_A 161 WNDSSID--KIEDRDFLVRYACEPTAEKFVP 189 (232)
T ss_dssp C---------CTTTEEEEEEECCTTSCSCEE
T ss_pred HHHhccc--ccCCceEEEEEEEcCCcCcccc
Confidence 7654332 3456899999999997776773
No 21
>1m4z_A Origin recognition complex subunit 1; DNA replication, transcriptional silencing, chromatin, BAH D gene regulation; 2.20A {Saccharomyces cerevisiae} SCOP: b.34.12.1 PDB: 1zhi_A 1zbx_A
Probab=98.71 E-value=3.3e-08 Score=92.96 Aligned_cols=121 Identities=12% Similarity=0.103 Sum_probs=87.9
Q ss_pred EcCeEEeeCCeEEeCCCccccccCCccccccCCCCCCCCccchhhhcccCCceeccCCCCCCCceEEEEEEEEecCCCCC
Q psy13720 8 YEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKN 87 (487)
Q Consensus 8 ~~g~~y~vGD~V~v~p~~~~~~~~~~~~~~~~~~~~~de~~~~e~~r~~~~~~~~~~~~~~~P~~IgrI~~i~~~~~~~~ 87 (487)
.||.++++||+|.|..+. .+-|.++-|.+|-....
T Consensus 48 ~Dg~~~~~GDsVlv~~~~------------------------------------------~~sysv~LI~eIrl~t~--- 82 (238)
T 1m4z_A 48 SDGIKLGRGDSVVMHNEA------------------------------------------AGTYSVYMIQELRLNTL--- 82 (238)
T ss_dssp TTCCEECTTCEEEEEETT------------------------------------------TTEEEEEEEEEEEEETT---
T ss_pred cCCcEEeCCCEEEEecCC------------------------------------------CCceEEEEEEEEEecCC---
Confidence 489999999999994322 22245666666654431
Q ss_pred CCCCceEEEEEeeeccccCCCC-----cccc--------cc--------CCCceEEecccceeecccceeeeeEEEeecC
Q psy13720 88 VSASDVFLTVKKFYRPENTHRS-----VEFT--------YQ--------LDLNKLYWSDEEEQVSLSDVQGKCFVVCEDN 146 (487)
Q Consensus 88 ~~~~~~~v~v~wfyRp~dt~~~-----~~~~--------~~--------~d~reLF~S~~~d~vp~~~I~GKC~V~~~~~ 146 (487)
..-+.+.|.||+|..|+... .... .. ...+|||+|.+.+.+-+.+|.++|+|...++
T Consensus 83 --~n~vei~v~wylR~~Ei~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~nELflTa~l~eI~l~diI~~anVls~~E 160 (238)
T 1m4z_A 83 --NNVVELWALTYLRWFEVNPLAHYRQFNPDANILNRPLNYYNKLFSETANKNELYLTAELAELQLFNFIRVANVMDGSK 160 (238)
T ss_dssp --TTEEEEEEEEEECGGGSCHHHHHHHHCHHHHHSCCCHHHHHHHHHHHSCTTEEEEEEEEEEECGGGEEEEEEEECHHH
T ss_pred --CceEEEEEEEeecHHHcCchhhhhhcCchhcccccchhhhhhhhhcccccceEEEeccHHHHhHHhhhhheEeccHHH
Confidence 14677899999999998420 0111 22 6889999999999999999999999998887
Q ss_pred CcccccccccCCCCeeEEEEeecCCCCcccc
Q psy13720 147 LQISTDRWSSRGPHRFYFNEAYNSKTEEFTN 177 (487)
Q Consensus 147 ~~~~~~~~~~~~~d~Fy~~~~Yd~~~~~f~~ 177 (487)
...... .......|||++.+|+....|..
T Consensus 161 f~~i~~--d~~~~~tFf~R~~cd~~~~~f~~ 189 (238)
T 1m4z_A 161 WEVLKG--NVDPERDFTVRYICEPTGEKFVD 189 (238)
T ss_dssp HHHHGG--GCCTTTEEEEEEECCTTSCCCEE
T ss_pred Hhhhcc--ccccCceEEEEEEEcCCcCcccc
Confidence 654322 22456899999999997776763
No 22
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.29 E-value=5.3e-06 Score=85.34 Aligned_cols=138 Identities=14% Similarity=0.132 Sum_probs=90.3
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhC------C-CCceeccchHHHHHHhhchhhhccccc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN------P-GCTVFVDDCNKILQRVIDNEVCDDKKQ 288 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~------p-~~~~~~~di~~~~~~~~~~~~~~~~~~ 288 (487)
..-++||||||.|++++.+...|. ..+.++|+++.|++..+.|. . +...+.+|+.+++.....
T Consensus 220 ~~~~VLDl~cG~G~~sl~la~~g~-~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~--------- 289 (396)
T 3c0k_A 220 ENKRVLNCFSYTGGFAVSALMGGC-SQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRD--------- 289 (396)
T ss_dssp TTCEEEEESCTTCSHHHHHHHTTC-SEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHH---------
T ss_pred CCCeEEEeeccCCHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHh---------
Confidence 455899999999999999999885 68999999999999888773 2 345778888776532110
Q ss_pred cCCCCCcccEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhhcCCc-EEEEecCcchhcccchhHHHHHHHHHH
Q psy13720 289 KLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPR-FFLLENVRNFVAFKNSMVLKMTMRCLT 367 (487)
Q Consensus 289 ~~p~~~~vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~~~P~-~~ilENV~gl~~~~~~~~~~~i~~~l~ 367 (487)
..+.+|+|+..||+.+.|..... +....+-.-+..++..++|. .+++.+.++.+... ...+.+.+.+.
T Consensus 290 ---~~~~fD~Ii~dpP~~~~~~~~~~------~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~--~~~~~i~~~~~ 358 (396)
T 3c0k_A 290 ---RGEKFDVIVMDPPKFVENKSQLM------GACRGYKDINMLAIQLLNEGGILLTFSCSGLMTSD--LFQKIIADAAI 358 (396)
T ss_dssp ---TTCCEEEEEECCSSTTTCSSSSS------CCCTHHHHHHHHHHHTEEEEEEEEEEECCTTCCHH--HHHHHHHHHHH
T ss_pred ---cCCCCCEEEECCCCCCCChhHHH------HHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHH--HHHHHHHHHHH
Confidence 12368999999998777653321 11111222233345666775 56666666544321 23344455777
Q ss_pred hCCCeeE
Q psy13720 368 QIGYQCT 374 (487)
Q Consensus 368 ~~GY~~~ 374 (487)
+.|+.+.
T Consensus 359 ~~g~~~~ 365 (396)
T 3c0k_A 359 DAGRDVQ 365 (396)
T ss_dssp HHTCCEE
T ss_pred HcCCeEE
Confidence 8886554
No 23
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.05 E-value=3.5e-05 Score=71.11 Aligned_cols=118 Identities=17% Similarity=0.236 Sum_probs=78.1
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCC----CCceeccchHHHHHHhhchhhhccccccCC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP----GCTVFVDDCNKILQRVIDNEVCDDKKQKLP 291 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p----~~~~~~~di~~~~~~~~~~~~~~~~~~~~p 291 (487)
..-++||++||.|+++..+...|. ..+.++|+++.+++..+.|.. +..++.+|+.+ +|
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~-----------------~~ 110 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALLLGA-KEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSE-----------------FN 110 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGG-----------------CC
T ss_pred CcCEEEEeeCCCCHHHHHHHHcCC-CEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHH-----------------cC
Confidence 456899999999999999988886 578999999999999998875 23344445432 22
Q ss_pred CCCcccEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhhcCCcEEEEecCcchhcccchhHHHHHHHHHHhCCC
Q psy13720 292 RKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGY 371 (487)
Q Consensus 292 ~~~~vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~~~P~~~ilENV~gl~~~~~~~~~~~i~~~l~~~GY 371 (487)
+.+|+|+..||+...+.. ....++...++++ -..+++- + ........+.+.|.+.||
T Consensus 111 --~~~D~v~~~~p~~~~~~~----------~~~~~l~~~~~~l----~~~~~~~-~------~~~~~~~~~~~~l~~~g~ 167 (207)
T 1wy7_A 111 --SRVDIVIMNPPFGSQRKH----------ADRPFLLKAFEIS----DVVYSIH-L------AKPEVRRFIEKFSWEHGF 167 (207)
T ss_dssp --CCCSEEEECCCCSSSSTT----------TTHHHHHHHHHHC----SEEEEEE-E------CCHHHHHHHHHHHHHTTE
T ss_pred --CCCCEEEEcCCCccccCC----------chHHHHHHHHHhc----CcEEEEE-e------CCcCCHHHHHHHHHHCCC
Confidence 378999999997554320 1123444455544 2222222 1 122345667778888998
Q ss_pred eeE
Q psy13720 372 QCT 374 (487)
Q Consensus 372 ~~~ 374 (487)
.+.
T Consensus 168 ~~~ 170 (207)
T 1wy7_A 168 VVT 170 (207)
T ss_dssp EEE
T ss_pred eEE
Confidence 764
No 24
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=97.86 E-value=0.00022 Score=64.31 Aligned_cols=150 Identities=11% Similarity=0.085 Sum_probs=98.5
Q ss_pred CCCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCCCCceeccchHHHHHHhhchhhhccccccCCCCC
Q psy13720 215 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKG 294 (487)
Q Consensus 215 ~~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p~~~~~~~di~~~~~~~~~~~~~~~~~~~~p~~~ 294 (487)
++..++||+.||.|.++.-+...|. .+.++|+++.+++..+.+.++..+...|+.++ .++ .+
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~---------------~~~-~~ 106 (195)
T 3cgg_A 45 PRGAKILDAGCGQGRIGGYLSKQGH--DVLGTDLDPILIDYAKQDFPEARWVVGDLSVD---------------QIS-ET 106 (195)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTTC--EEEEEESCHHHHHHHHHHCTTSEEEECCTTTS---------------CCC-CC
T ss_pred cCCCeEEEECCCCCHHHHHHHHCCC--cEEEEcCCHHHHHHHHHhCCCCcEEEcccccC---------------CCC-CC
Confidence 3566899999999999999988885 57899999999999999988777776665431 122 35
Q ss_pred cccEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhhcCCcEEEEecCcchhcccchhHHHHHHHHHHhCCCeeE
Q psy13720 295 EVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCT 374 (487)
Q Consensus 295 ~vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~~~P~~~ilENV~gl~~~~~~~~~~~i~~~l~~~GY~~~ 374 (487)
.+|+|+..+++-.+.. .+....++..+ .+.++|.-.++=.++.. .......+.+.|.+.|+.+.
T Consensus 107 ~~D~i~~~~~~~~~~~---------~~~~~~~l~~~---~~~l~~~G~l~~~~~~~----~~~~~~~~~~~l~~~Gf~~~ 170 (195)
T 3cgg_A 107 DFDLIVSAGNVMGFLA---------EDGREPALANI---HRALGADGRAVIGFGAG----RGWVFGDFLEVAERVGLELE 170 (195)
T ss_dssp CEEEEEECCCCGGGSC---------HHHHHHHHHHH---HHHEEEEEEEEEEEETT----SSCCHHHHHHHHHHHTEEEE
T ss_pred ceeEEEECCcHHhhcC---------hHHHHHHHHHH---HHHhCCCCEEEEEeCCC----CCcCHHHHHHHHHHcCCEEe
Confidence 7999998766543321 01112334433 34456754433222211 11245678888889999987
Q ss_pred EEEEeccCCCCCCcccEEEEEEEc
Q psy13720 375 FGTLQAGHFGVSQTRRRAIVLAAA 398 (487)
Q Consensus 375 ~~~l~a~~yGvPQ~R~R~fiia~~ 398 (487)
...-........+...++++++.+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~v~~k 194 (195)
T 3cgg_A 171 NAFESWDLKPFVQGSEFLVAVFTK 194 (195)
T ss_dssp EEESSTTCCBCCTTCSEEEEEEEE
T ss_pred eeecccccCcCCCCCcEEEEEEec
Confidence 665554444556677788887754
No 25
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=97.86 E-value=0.0001 Score=75.61 Aligned_cols=72 Identities=19% Similarity=0.279 Sum_probs=56.8
Q ss_pred CCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhC----CCCceeccchHHHHHHhhchhhhccccccCCC
Q psy13720 217 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN----PGCTVFVDDCNKILQRVIDNEVCDDKKQKLPR 292 (487)
Q Consensus 217 ~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~----p~~~~~~~di~~~~~~~~~~~~~~~~~~~~p~ 292 (487)
.-++||+|||.|++++-+...|. + +.++|+++.|++..+.|. -...+.++|+.+++.. +
T Consensus 215 g~~VLDlg~GtG~~sl~~a~~ga-~-V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~-------------~-- 277 (393)
T 4dmg_A 215 GERVLDVYSYVGGFALRAARKGA-Y-ALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRG-------------L-- 277 (393)
T ss_dssp TCEEEEESCTTTHHHHHHHHTTC-E-EEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHT-------------C--
T ss_pred CCeEEEcccchhHHHHHHHHcCC-e-EEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHH-------------h--
Confidence 56899999999999999998886 6 999999999998877763 2334567788766421 1
Q ss_pred CCcccEEEccCCC
Q psy13720 293 KGEVEMLCGGPPC 305 (487)
Q Consensus 293 ~~~vd~i~ggpPC 305 (487)
.+.+|+|+..|||
T Consensus 278 ~~~fD~Ii~dpP~ 290 (393)
T 4dmg_A 278 EGPFHHVLLDPPT 290 (393)
T ss_dssp CCCEEEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 1249999999998
No 26
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=97.82 E-value=8.5e-05 Score=72.47 Aligned_cols=120 Identities=18% Similarity=0.179 Sum_probs=83.7
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCC-----C-CceeccchHHHHHHhhchhhhcccccc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP-----G-CTVFVDDCNKILQRVIDNEVCDDKKQK 289 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p-----~-~~~~~~di~~~~~~~~~~~~~~~~~~~ 289 (487)
+.-++||+|||.|+++..+...|. ..+.++|+++.|++..+.|.. + ...+++|+.++
T Consensus 125 ~~~~VLDlgcG~G~~~~~la~~~~-~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~---------------- 187 (278)
T 2frn_A 125 PDELVVDMFAGIGHLSLPIAVYGK-AKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDF---------------- 187 (278)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTC-CEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTC----------------
T ss_pred CCCEEEEecccCCHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHh----------------
Confidence 356799999999999999998886 479999999999998887632 1 33455565432
Q ss_pred CCCCCcccEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhhcCCc--EEEEecCcc-hhcccchhHHHHHHHHH
Q psy13720 290 LPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPR--FFLLENVRN-FVAFKNSMVLKMTMRCL 366 (487)
Q Consensus 290 ~p~~~~vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~~~P~--~~ilENV~g-l~~~~~~~~~~~i~~~l 366 (487)
+..+.+|+|+..||+.. ..++.... +.++|. +++.++++. ... ...+..+.+.+
T Consensus 188 -~~~~~fD~Vi~~~p~~~----------------~~~l~~~~---~~LkpgG~l~~~~~~~~~~~~---~~~~~~i~~~~ 244 (278)
T 2frn_A 188 -PGENIADRILMGYVVRT----------------HEFIPKAL---SIAKDGAIIHYHNTVPEKLMP---REPFETFKRIT 244 (278)
T ss_dssp -CCCSCEEEEEECCCSSG----------------GGGHHHHH---HHEEEEEEEEEEEEEEGGGTT---TTTHHHHHHHH
T ss_pred -cccCCccEEEECCchhH----------------HHHHHHHH---HHCCCCeEEEEEEeecccccc---ccHHHHHHHHH
Confidence 12457999999988421 12344443 345664 677788763 321 24567888889
Q ss_pred HhCCCeeEE
Q psy13720 367 TQIGYQCTF 375 (487)
Q Consensus 367 ~~~GY~~~~ 375 (487)
.+.||.+..
T Consensus 245 ~~~G~~~~~ 253 (278)
T 2frn_A 245 KEYGYDVEK 253 (278)
T ss_dssp HHTTCEEEE
T ss_pred HHcCCeeEE
Confidence 999998765
No 27
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=97.75 E-value=0.00012 Score=71.26 Aligned_cols=135 Identities=16% Similarity=0.127 Sum_probs=75.5
Q ss_pred CCCeEeecccCchHHHHHHhh--cCCCcEEEEEcCcHHHHHHHHHhC-----CCCceeccchHHHHHHhhchhhhccccc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDK--SGVARSTWAIEFDSAAATAFKMNN-----PGCTVFVDDCNKILQRVIDNEVCDDKKQ 288 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~--aG~~~~~~a~e~~~~a~~t~~~N~-----p~~~~~~~di~~~~~~~~~~~~~~~~~~ 288 (487)
..-++||++||.||.+.-+.. .|. ..++|+|+++.+++..+.|. ++..++++|+.++.....
T Consensus 83 ~g~~VLDlgaG~G~~t~~la~~~~~~-~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~---------- 151 (274)
T 3ajd_A 83 EDDFILDMCAAPGGKTTHLAQLMKNK-GTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLL---------- 151 (274)
T ss_dssp TTCEEEETTCTTCHHHHHHHHHTTTC-SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHH----------
T ss_pred CcCEEEEeCCCccHHHHHHHHHcCCC-CEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhh----------
Confidence 456899999999999988765 342 46899999999999888773 355677788876532110
Q ss_pred cCCCCCcccEEEccCCCcCcccCCccCCcccccch--hHHHHHHHH-HhhhcCCcEEEEecCcchhcccchhHHHHHH
Q psy13720 289 KLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFK--NSLIVSYLS-YCDYYRPRFFLLENVRNFVAFKNSMVLKMTM 363 (487)
Q Consensus 289 ~~p~~~~vd~i~ggpPCq~fS~~~~~~~~~~~d~r--~~L~~~~l~-~v~~~~P~~~ilENV~gl~~~~~~~~~~~i~ 363 (487)
...+.+|+|+..+||.++....+.......+.. ..+...+++ +.+.++|.-.++=....+....+......++
T Consensus 152 --~~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~~~ene~~v~~~l 227 (274)
T 3ajd_A 152 --KNEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSMEVEENEEVIKYIL 227 (274)
T ss_dssp --HTTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCCTTSSHHHHHHHH
T ss_pred --hccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCChHHhHHHHHHHH
Confidence 012368999999999987765432100000000 011222222 3445688765555444444333433444433
No 28
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=97.69 E-value=0.00018 Score=65.88 Aligned_cols=74 Identities=23% Similarity=0.285 Sum_probs=58.0
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCCCCceeccchHHHHHHhhchhhhccccccCCCCCc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGE 295 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p~~~~~~~di~~~~~~~~~~~~~~~~~~~~p~~~~ 295 (487)
..-++||++||.|.++..+...|. ..+.++|+++.+++..+.|.++..++.+|+.+ +| +.
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~d~~~-----------------~~--~~ 110 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSYLLGA-ESVTAFDIDPDAIETAKRNCGGVNFMVADVSE-----------------IS--GK 110 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHHHTTB-SEEEEEESCHHHHHHHHHHCTTSEEEECCGGG-----------------CC--CC
T ss_pred CCCEEEEEeCCccHHHHHHHHcCC-CEEEEEECCHHHHHHHHHhcCCCEEEECcHHH-----------------CC--CC
Confidence 456899999999999999988885 57899999999999999998766666666543 22 47
Q ss_pred ccEEEccCCCcCcc
Q psy13720 296 VEMLCGGPPCQGFS 309 (487)
Q Consensus 296 vd~i~ggpPCq~fS 309 (487)
+|+|+..||-..++
T Consensus 111 ~D~v~~~~p~~~~~ 124 (200)
T 1ne2_A 111 YDTWIMNPPFGSVV 124 (200)
T ss_dssp EEEEEECCCC----
T ss_pred eeEEEECCCchhcc
Confidence 99999999965543
No 29
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=97.66 E-value=0.00053 Score=61.10 Aligned_cols=120 Identities=15% Similarity=0.154 Sum_probs=78.6
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhC-----CCCceeccchHHHHHHhhchhhhccccccC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN-----PGCTVFVDDCNKILQRVIDNEVCDDKKQKL 290 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~-----p~~~~~~~di~~~~~~~~~~~~~~~~~~~~ 290 (487)
...++||+.||.|.++.-+...+ ..+.++|+++.+++..+.|. ++..++.+|+.+.+
T Consensus 35 ~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~---------------- 96 (183)
T 2yxd_A 35 KDDVVVDVGCGSGGMTVEIAKRC--KFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAEDVL---------------- 96 (183)
T ss_dssp TTCEEEEESCCCSHHHHHHHTTS--SEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHHHG----------------
T ss_pred CCCEEEEeCCCCCHHHHHHHhcC--CeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccccc----------------
Confidence 45689999999999999998843 47899999999988877764 34556677765421
Q ss_pred CCCCcccEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhhcCCcE-EEEecCcchhcccchhHHHHHHHHHHhC
Q psy13720 291 PRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRF-FLLENVRNFVAFKNSMVLKMTMRCLTQI 369 (487)
Q Consensus 291 p~~~~vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~~~P~~-~ilENV~gl~~~~~~~~~~~i~~~l~~~ 369 (487)
+. +.+|+|+..++ . + ...++.. +... |.- +++.. .+ ...+..+++.|.+.
T Consensus 97 ~~-~~~D~i~~~~~-------~--------~-~~~~l~~----~~~~-~gG~l~~~~-~~------~~~~~~~~~~l~~~ 147 (183)
T 2yxd_A 97 DK-LEFNKAFIGGT-------K--------N-IEKIIEI----LDKK-KINHIVANT-IV------LENAAKIINEFESR 147 (183)
T ss_dssp GG-CCCSEEEECSC-------S--------C-HHHHHHH----HHHT-TCCEEEEEE-SC------HHHHHHHHHHHHHT
T ss_pred cC-CCCcEEEECCc-------c--------c-HHHHHHH----HhhC-CCCEEEEEe-cc------cccHHHHHHHHHHc
Confidence 11 36899998877 0 1 1123333 3333 643 33322 22 13456788999999
Q ss_pred CCeeEEEEEeccC
Q psy13720 370 GYQCTFGTLQAGH 382 (487)
Q Consensus 370 GY~~~~~~l~a~~ 382 (487)
||.+....+....
T Consensus 148 g~~~~~~~~~~~~ 160 (183)
T 2yxd_A 148 GYNVDAVNVFISY 160 (183)
T ss_dssp TCEEEEEEEEEEE
T ss_pred CCeEEEEEeeeeh
Confidence 9988776554443
No 30
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=97.63 E-value=0.00086 Score=62.64 Aligned_cols=156 Identities=15% Similarity=0.086 Sum_probs=87.9
Q ss_pred CCCCeEeecccC-chHHHHHHhhc-CCCcEEEEEcCcHHHHHHHHHhCC----CCceeccchHHHHHHhhchhhhccccc
Q psy13720 215 ARPLRCLEVFAG-AGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMNNP----GCTVFVDDCNKILQRVIDNEVCDDKKQ 288 (487)
Q Consensus 215 ~~~l~~ldLFsG-~Gg~s~Gl~~a-G~~~~~~a~e~~~~a~~t~~~N~p----~~~~~~~di~~~~~~~~~~~~~~~~~~ 288 (487)
++..++||+.|| .|.++.-+... + ..+.++|+++.+++.-+.|.. ...++.+|+..+ .
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~--------------~ 117 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAEKFFN--CKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGII--------------K 117 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHHHHHC--CEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSS--------------T
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHhcC--CEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhh--------------h
Confidence 356789999999 99999998877 5 368999999999988776642 344555554211 1
Q ss_pred cCCCCCcccEEEccCCCcCcccCCccCCc----ccccchhHHHHHHHH-HhhhcCCcEEEEecCcchhcccchhHHHHHH
Q psy13720 289 KLPRKGEVEMLCGGPPCQGFSGMNRFNQR----QYSAFKNSLIVSYLS-YCDYYRPRFFLLENVRNFVAFKNSMVLKMTM 363 (487)
Q Consensus 289 ~~p~~~~vd~i~ggpPCq~fS~~~~~~~~----~~~d~r~~L~~~~l~-~v~~~~P~~~ilENV~gl~~~~~~~~~~~i~ 363 (487)
.++ .+.+|+|+..||+-..+........ ...... .++..+++ +.+.++|.-.++=-++. .......+.
T Consensus 118 ~~~-~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~LkpgG~l~~~~~~-----~~~~~~~~~ 190 (230)
T 3evz_A 118 GVV-EGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGE-EFSVKLLEEAFDHLNPGGKVALYLPD-----KEKLLNVIK 190 (230)
T ss_dssp TTC-CSCEEEEEECCCCC---------------CCSSSC-HHHHHHHHHHGGGEEEEEEEEEEEES-----CHHHHHHHH
T ss_pred hcc-cCceeEEEECCCCcCCccccccChhhhhccCccch-HHHHHHHHHHHHHhCCCeEEEEEecc-----cHhHHHHHH
Confidence 122 2579999999998665432110000 000011 22334443 33446776543321211 113457788
Q ss_pred HHHHhCCCeeEEEEEeccCCCCCCcccEEEEEEEcC
Q psy13720 364 RCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAP 399 (487)
Q Consensus 364 ~~l~~~GY~~~~~~l~a~~yGvPQ~R~R~fiia~~~ 399 (487)
+.|.+.||.+....+. .-.+.+.+++-.+.
T Consensus 191 ~~l~~~g~~~~~~~~~------~g~~~~~~l~f~~~ 220 (230)
T 3evz_A 191 ERGIKLGYSVKDIKFK------VGTRWRHSLIFFKG 220 (230)
T ss_dssp HHHHHTTCEEEEEEEC------CCC-CEEEEEEECC
T ss_pred HHHHHcCCceEEEEec------CCCeEEEEEEEecc
Confidence 8899999977655432 22344555555553
No 31
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=97.62 E-value=0.00028 Score=72.15 Aligned_cols=81 Identities=11% Similarity=0.101 Sum_probs=59.8
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhC-----C--CCceeccchHHHHHHhhchhhhccccc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN-----P--GCTVFVDDCNKILQRVIDNEVCDDKKQ 288 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~-----p--~~~~~~~di~~~~~~~~~~~~~~~~~~ 288 (487)
..-++||||||.|++++-+...|. ..+.++|+++.|++.-+.|. . +...+++|+.+++.....
T Consensus 212 ~~~~VLDl~cGtG~~sl~la~~ga-~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~--------- 281 (385)
T 2b78_A 212 AGKTVLNLFSYTAAFSVAAAMGGA-MATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARR--------- 281 (385)
T ss_dssp BTCEEEEETCTTTHHHHHHHHTTB-SEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHH---------
T ss_pred CCCeEEEEeeccCHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHH---------
Confidence 345799999999999999988786 67899999999988877763 2 456788898876532210
Q ss_pred cCCCCCcccEEEccCCCcCcc
Q psy13720 289 KLPRKGEVEMLCGGPPCQGFS 309 (487)
Q Consensus 289 ~~p~~~~vd~i~ggpPCq~fS 309 (487)
....+|+|+.-||+-+.|
T Consensus 282 ---~~~~fD~Ii~DPP~~~~~ 299 (385)
T 2b78_A 282 ---HHLTYDIIIIDPPSFARN 299 (385)
T ss_dssp ---TTCCEEEEEECCCCC---
T ss_pred ---hCCCccEEEECCCCCCCC
Confidence 123689999999986544
No 32
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=97.61 E-value=0.00098 Score=63.87 Aligned_cols=161 Identities=12% Similarity=0.074 Sum_probs=89.2
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCC------CCceeccchHHHHHHhhchhhhcccccc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP------GCTVFVDDCNKILQRVIDNEVCDDKKQK 289 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p------~~~~~~~di~~~~~~~~~~~~~~~~~~~ 289 (487)
+.-++||+.||.|++++.+...+. ..+.++|+++.+++.-+.|.. ...++.+|+.++. ..
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~~-~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~-------------~~ 114 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRTK-AKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKIT-------------DL 114 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTCC-CEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGG-------------GT
T ss_pred CCCEEEEcCCchhHHHHHHHHhcC-CcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhh-------------hh
Confidence 456899999999999999988775 478999999999888777642 2456677765431 11
Q ss_pred CCCCCcccEEEccCCCcCcccCCccCC-cccccch---hHHHHHHHH-HhhhcCCcEEEEecCcchhcccchhHHHHHHH
Q psy13720 290 LPRKGEVEMLCGGPPCQGFSGMNRFNQ-RQYSAFK---NSLIVSYLS-YCDYYRPRFFLLENVRNFVAFKNSMVLKMTMR 364 (487)
Q Consensus 290 ~p~~~~vd~i~ggpPCq~fS~~~~~~~-~~~~d~r---~~L~~~~l~-~v~~~~P~~~ilENV~gl~~~~~~~~~~~i~~ 364 (487)
++ .+.+|+|+..||+-..+..+.... ......+ ...+..+++ +...++|.-.++= | . ....+..++.
T Consensus 115 ~~-~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~-~---~---~~~~~~~~~~ 186 (259)
T 3lpm_A 115 IP-KERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANF-V---H---RPERLLDIID 186 (259)
T ss_dssp SC-TTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEE-E---E---CTTTHHHHHH
T ss_pred hc-cCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEE-E---E---cHHHHHHHHH
Confidence 22 357999999999866632221100 0000000 011222332 2334567543321 1 1 1123567788
Q ss_pred HHHhCCCeeEEEEEeccCCCCCCcccEEEEEEEcCC
Q psy13720 365 CLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPG 400 (487)
Q Consensus 365 ~l~~~GY~~~~~~l~a~~yGvPQ~R~R~fiia~~~~ 400 (487)
.+.+.|+.+.....-...-|.| -.|+++-+.+.+
T Consensus 187 ~l~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~k~~ 220 (259)
T 3lpm_A 187 IMRKYRLEPKRIQFVHPRSDRE--ANTVLVEGIKDG 220 (259)
T ss_dssp HHHHTTEEEEEEEEEESSTTSC--CSEEEEEEEETC
T ss_pred HHHHCCCceEEEEEeecCCCCC--cEEEEEEEEeCC
Confidence 8888898876543322222332 246666666544
No 33
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=97.58 E-value=0.00015 Score=67.02 Aligned_cols=75 Identities=21% Similarity=0.315 Sum_probs=56.7
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhC-------CCCceeccchHHHHHHhhchhhhccccc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN-------PGCTVFVDDCNKILQRVIDNEVCDDKKQ 288 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~-------p~~~~~~~di~~~~~~~~~~~~~~~~~~ 288 (487)
..-++||++||.|+++..+...|. ..+.++|+++.+++..+.|. ++..++.+|+.+++.
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~------------- 118 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQA-KKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLK------------- 118 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTC-SEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTT-------------
T ss_pred CCCeEEEcCCccCHHHHHHHHccC-CEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHH-------------
Confidence 345899999999999998777776 67899999999999888774 345667778765420
Q ss_pred cCCCCCc-ccEEEccCCC
Q psy13720 289 KLPRKGE-VEMLCGGPPC 305 (487)
Q Consensus 289 ~~p~~~~-vd~i~ggpPC 305 (487)
.++ .+. +|+|+..||.
T Consensus 119 ~~~-~~~~fD~I~~~~~~ 135 (201)
T 2ift_A 119 QPQ-NQPHFDVVFLDPPF 135 (201)
T ss_dssp SCC-SSCCEEEEEECCCS
T ss_pred hhc-cCCCCCEEEECCCC
Confidence 111 246 8999999983
No 34
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=97.54 E-value=0.00012 Score=69.12 Aligned_cols=77 Identities=17% Similarity=0.211 Sum_probs=61.6
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhC------CCCceeccchHHHHHHhhchhhhcccccc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN------PGCTVFVDDCNKILQRVIDNEVCDDKKQK 289 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~------p~~~~~~~di~~~~~~~~~~~~~~~~~~~ 289 (487)
...++||++||.|+++..+...|. .++++|+++.+++..+.|. +...++++|+.++.
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--------------- 140 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTGM--RVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA--------------- 140 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG---------------
T ss_pred CCCEEEECccccCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc---------------
Confidence 456899999999999999999884 6789999999998888774 24566777876641
Q ss_pred CCCCCcccEEEccCCCcCcccC
Q psy13720 290 LPRKGEVEMLCGGPPCQGFSGM 311 (487)
Q Consensus 290 ~p~~~~vd~i~ggpPCq~fS~~ 311 (487)
..+.+|+|+..|||...+..
T Consensus 141 --~~~~~D~v~~~~~~~~~~~~ 160 (241)
T 3gdh_A 141 --SFLKADVVFLSPPWGGPDYA 160 (241)
T ss_dssp --GGCCCSEEEECCCCSSGGGG
T ss_pred --ccCCCCEEEECCCcCCcchh
Confidence 12368999999999987753
No 35
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=97.50 E-value=0.00068 Score=69.41 Aligned_cols=81 Identities=17% Similarity=0.224 Sum_probs=61.1
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCC------CCceeccchHHHHHHhhchhhhcccccc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP------GCTVFVDDCNKILQRVIDNEVCDDKKQK 289 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p------~~~~~~~di~~~~~~~~~~~~~~~~~~~ 289 (487)
..-++||+|||.|++++-+...|. .-+.++|+++.|++..+.|.. +...+.+|+.+++.....
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g~-~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~---------- 285 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAGA-DEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQK---------- 285 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHH----------
T ss_pred CCCeEEEecCCCCHHHHHHHHCCC-CEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHh----------
Confidence 456899999999999999988886 679999999999988877642 345677888776432110
Q ss_pred CCCCCcccEEEccCCCcCcc
Q psy13720 290 LPRKGEVEMLCGGPPCQGFS 309 (487)
Q Consensus 290 ~p~~~~vd~i~ggpPCq~fS 309 (487)
..+.+|+|+.-||+-+.|
T Consensus 286 --~~~~fD~Vi~dpP~~~~~ 303 (396)
T 2as0_A 286 --KGEKFDIVVLDPPAFVQH 303 (396)
T ss_dssp --TTCCEEEEEECCCCSCSS
T ss_pred --hCCCCCEEEECCCCCCCC
Confidence 123689999999975544
No 36
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=97.49 E-value=0.00025 Score=64.49 Aligned_cols=75 Identities=23% Similarity=0.340 Sum_probs=58.4
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhC-----CCCceeccchHHHHHHhhchhhhccccccC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN-----PGCTVFVDDCNKILQRVIDNEVCDDKKQKL 290 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~-----p~~~~~~~di~~~~~~~~~~~~~~~~~~~~ 290 (487)
+.-++|||+||.|.++..+...|. ..+.++|+++.+++..+.|. ++..++++|+.+++.. +
T Consensus 44 ~~~~vLDlgcG~G~~~~~~~~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-------------~ 109 (189)
T 3p9n_A 44 TGLAVLDLYAGSGALGLEALSRGA-ASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAA-------------G 109 (189)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTC-SEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHH-------------C
T ss_pred CCCEEEEeCCCcCHHHHHHHHCCC-CeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhh-------------c
Confidence 456899999999999998777786 67899999999998888764 3456788888776421 1
Q ss_pred CCCCcccEEEccCCC
Q psy13720 291 PRKGEVEMLCGGPPC 305 (487)
Q Consensus 291 p~~~~vd~i~ggpPC 305 (487)
+ .+.+|+|+..||.
T Consensus 110 ~-~~~fD~i~~~~p~ 123 (189)
T 3p9n_A 110 T-TSPVDLVLADPPY 123 (189)
T ss_dssp C-SSCCSEEEECCCT
T ss_pred c-CCCccEEEECCCC
Confidence 1 2478999999883
No 37
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=97.49 E-value=0.00012 Score=71.65 Aligned_cols=129 Identities=18% Similarity=0.156 Sum_probs=81.3
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCC------CCceeccchHHHHHHhhchhhhcccccc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP------GCTVFVDDCNKILQRVIDNEVCDDKKQK 289 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p------~~~~~~~di~~~~~~~~~~~~~~~~~~~ 289 (487)
+.-+++|+|||.|++++-+...|. .-++|+|+|+.|++..+.|.. ...++++|..+
T Consensus 125 ~g~~VlD~~aG~G~~~i~~a~~g~-~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~----------------- 186 (278)
T 3k6r_A 125 PDELVVDMFAGIGHLSLPIAVYGK-AKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRD----------------- 186 (278)
T ss_dssp TTCEEEETTCTTTTTTHHHHHHTC-CEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTT-----------------
T ss_pred CCCEEEEecCcCcHHHHHHHHhcC-CeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHH-----------------
Confidence 456799999999999998877775 468999999999999988731 13455556433
Q ss_pred CCCCCcccEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhhcCCcEE--EEecCcchhcccchhHHHHHHHHHH
Q psy13720 290 LPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFF--LLENVRNFVAFKNSMVLKMTMRCLT 367 (487)
Q Consensus 290 ~p~~~~vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~~~P~~~--ilENV~gl~~~~~~~~~~~i~~~l~ 367 (487)
++..+.+|.|+.++|.-.. ..+...++ .++|.-+ +-+||+.-.. .......+.+...
T Consensus 187 ~~~~~~~D~Vi~~~p~~~~----------------~~l~~a~~---~lk~gG~ih~~~~~~e~~~--~~~~~e~i~~~~~ 245 (278)
T 3k6r_A 187 FPGENIADRILMGYVVRTH----------------EFIPKALS---IAKDGAIIHYHNTVPEKLM--PREPFETFKRITK 245 (278)
T ss_dssp CCCCSCEEEEEECCCSSGG----------------GGHHHHHH---HEEEEEEEEEEEEEEGGGT--TTTTHHHHHHHHH
T ss_pred hccccCCCEEEECCCCcHH----------------HHHHHHHH---HcCCCCEEEEEeeeccccc--chhHHHHHHHHHH
Confidence 2334578999999985210 12333333 3455443 3466653211 1234556666777
Q ss_pred hCCCeeEEE-EEeccCC
Q psy13720 368 QIGYQCTFG-TLQAGHF 383 (487)
Q Consensus 368 ~~GY~~~~~-~l~a~~y 383 (487)
..||.+... +-.-..|
T Consensus 246 ~~g~~v~~~~~~~Vk~y 262 (278)
T 3k6r_A 246 EYGYDVEKLNELKIKRY 262 (278)
T ss_dssp HTTCEEEEEEEEEEEEE
T ss_pred HcCCcEEEEEEEEEEeE
Confidence 899987533 2233445
No 38
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=97.48 E-value=0.00026 Score=65.43 Aligned_cols=73 Identities=23% Similarity=0.311 Sum_probs=56.8
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhC-----CCCceeccchHHHHHHhhchhhhccccccC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN-----PGCTVFVDDCNKILQRVIDNEVCDDKKQKL 290 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~-----p~~~~~~~di~~~~~~~~~~~~~~~~~~~~ 290 (487)
..-++|||+||.|.++..+...|. ..+.++|+++.+++..+.|. ++..++++|+.+++. .
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~-~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~------------~-- 118 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYA-AGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLA------------Q-- 118 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTC-SEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHS------------S--
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCC-CEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHh------------h--
Confidence 346899999999999998777786 57899999999999888775 345677788766421 0
Q ss_pred CCCCcccEEEccCC
Q psy13720 291 PRKGEVEMLCGGPP 304 (487)
Q Consensus 291 p~~~~vd~i~ggpP 304 (487)
..+.+|+|+..||
T Consensus 119 -~~~~fD~V~~~~p 131 (202)
T 2fpo_A 119 -KGTPHNIVFVDPP 131 (202)
T ss_dssp -CCCCEEEEEECCS
T ss_pred -cCCCCCEEEECCC
Confidence 1246899999988
No 39
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=97.45 E-value=0.0022 Score=57.35 Aligned_cols=140 Identities=12% Similarity=0.113 Sum_probs=87.8
Q ss_pred CCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCCCCceeccchHHHHHHhhchhhhccccccCCCCCcc
Q psy13720 217 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEV 296 (487)
Q Consensus 217 ~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p~~~~~~~di~~~~~~~~~~~~~~~~~~~~p~~~~v 296 (487)
.-++||+.||.|.++..+...| .+.++|+++.+++. .++..+.++|+.+. ++ .+.+
T Consensus 24 ~~~vLD~GcG~G~~~~~l~~~~---~v~gvD~s~~~~~~----~~~~~~~~~d~~~~----------------~~-~~~f 79 (170)
T 3q87_B 24 MKIVLDLGTSTGVITEQLRKRN---TVVSTDLNIRALES----HRGGNLVRADLLCS----------------IN-QESV 79 (170)
T ss_dssp SCEEEEETCTTCHHHHHHTTTS---EEEEEESCHHHHHT----CSSSCEEECSTTTT----------------BC-GGGC
T ss_pred CCeEEEeccCccHHHHHHHhcC---cEEEEECCHHHHhc----ccCCeEEECChhhh----------------cc-cCCC
Confidence 3489999999999999998887 68999999999987 34556666665421 11 1478
Q ss_pred cEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhhcCCcEEEEecCcchhcccchhHHHHHHHHHHhCCCeeEEE
Q psy13720 297 EMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFG 376 (487)
Q Consensus 297 d~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~~~P~~~ilENV~gl~~~~~~~~~~~i~~~l~~~GY~~~~~ 376 (487)
|+|+..||-...+..... .. ......++..+++.+ -.-.+++.++.. .....+.+.|.+.||.+...
T Consensus 80 D~i~~n~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~l--pgG~l~~~~~~~--------~~~~~l~~~l~~~gf~~~~~ 146 (170)
T 3q87_B 80 DVVVFNPPYVPDTDDPII--GG-GYLGREVIDRFVDAV--TVGMLYLLVIEA--------NRPKEVLARLEERGYGTRIL 146 (170)
T ss_dssp SEEEECCCCBTTCCCTTT--BC-CGGGCHHHHHHHHHC--CSSEEEEEEEGG--------GCHHHHHHHHHHTTCEEEEE
T ss_pred CEEEECCCCccCCccccc--cC-CcchHHHHHHHHhhC--CCCEEEEEEecC--------CCHHHHHHHHHHCCCcEEEE
Confidence 999999886554432110 00 111224566666665 122334444322 23466778888999987654
Q ss_pred EEeccCCCCCCcccEEEEEEEcC
Q psy13720 377 TLQAGHFGVSQTRRRAIVLAAAP 399 (487)
Q Consensus 377 ~l~a~~yGvPQ~R~R~fiia~~~ 399 (487)
.-.- +| .+|++.+=..+
T Consensus 147 ~~~~--~~----~e~~~~~~~~~ 163 (170)
T 3q87_B 147 KVRK--IL----GETVYIIKGEK 163 (170)
T ss_dssp EEEE--CS----SSEEEEEEEEC
T ss_pred Eeec--cC----CceEEEEEEec
Confidence 4433 22 45887765544
No 40
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=97.36 E-value=0.0027 Score=64.65 Aligned_cols=135 Identities=15% Similarity=0.143 Sum_probs=81.4
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhC-----CCCceeccchHHHHHHhhchhhhccccccC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN-----PGCTVFVDDCNKILQRVIDNEVCDDKKQKL 290 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~-----p~~~~~~~di~~~~~~~~~~~~~~~~~~~~ 290 (487)
..-++||+|||.|+++.-+...+ .-+.++|+++.|++..+.|. .+..++.+|+.+++.....
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~~--~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~----------- 275 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALGF--REVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEK----------- 275 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHHE--EEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHH-----------
T ss_pred CCCeEEEeeeccCHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHh-----------
Confidence 34579999999999999987763 57899999999998887763 3356778898876532210
Q ss_pred CCCCcccEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhhcCCc--EEEEecCcchhcccchhHHHHHHHHHHh
Q psy13720 291 PRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPR--FFLLENVRNFVAFKNSMVLKMTMRCLTQ 368 (487)
Q Consensus 291 p~~~~vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~~~P~--~~ilENV~gl~~~~~~~~~~~i~~~l~~ 368 (487)
..+.+|+|+.-||+-+.|.... ......+-.-+..+...++|. +++..|...+.. ..+...+.+.+.+
T Consensus 276 -~~~~fD~Ii~dpP~~~~~~~~~------~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~---~~~~~~i~~~~~~ 345 (382)
T 1wxx_A 276 -EGERFDLVVLDPPAFAKGKKDV------ERAYRAYKEVNLRAIKLLKEGGILATASCSHHMTE---PLFYAMVAEAAQD 345 (382)
T ss_dssp -TTCCEEEEEECCCCSCCSTTSH------HHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCH---HHHHHHHHHHHHH
T ss_pred -cCCCeeEEEECCCCCCCChhHH------HHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCH---HHHHHHHHHHHHH
Confidence 1236899999999865553221 000111111122344556775 344455443321 1233444456666
Q ss_pred CCCee
Q psy13720 369 IGYQC 373 (487)
Q Consensus 369 ~GY~~ 373 (487)
.|..+
T Consensus 346 ~g~~~ 350 (382)
T 1wxx_A 346 AHRLL 350 (382)
T ss_dssp TTCCE
T ss_pred cCCeE
Confidence 66543
No 41
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=97.30 E-value=0.00074 Score=74.41 Aligned_cols=79 Identities=18% Similarity=0.232 Sum_probs=60.4
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhC-----C--CCceeccchHHHHHHhhchhhhccccc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN-----P--GCTVFVDDCNKILQRVIDNEVCDDKKQ 288 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~-----p--~~~~~~~di~~~~~~~~~~~~~~~~~~ 288 (487)
+.-+|||||||.|++++.+...|. .-+.++|+++.|++.-+.|. . ...++++|+.+++..
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~ga-~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~------------ 605 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGGA-RSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLRE------------ 605 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHH------------
T ss_pred CCCcEEEeeechhHHHHHHHHCCC-CEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHh------------
Confidence 456899999999999999888886 67899999999999888763 1 355778898876422
Q ss_pred cCCCCCcccEEEccCCCcCccc
Q psy13720 289 KLPRKGEVEMLCGGPPCQGFSG 310 (487)
Q Consensus 289 ~~p~~~~vd~i~ggpPCq~fS~ 310 (487)
..+.+|+|+.-|||-+-|.
T Consensus 606 ---~~~~fD~Ii~DPP~f~~~~ 624 (703)
T 3v97_A 606 ---ANEQFDLIFIDPPTFSNSK 624 (703)
T ss_dssp ---CCCCEEEEEECCCSBC---
T ss_pred ---cCCCccEEEECCccccCCc
Confidence 1246999999999955443
No 42
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=97.19 E-value=0.0035 Score=65.54 Aligned_cols=83 Identities=18% Similarity=0.158 Sum_probs=61.0
Q ss_pred CCCeEeecccCchHHHHHHhhc-CCCcEEEEEcCcHHHHHHHHHhCC----CCceeccchHHHHHHhhchhhhccccccC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMNNP----GCTVFVDDCNKILQRVIDNEVCDDKKQKL 290 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~a-G~~~~~~a~e~~~~a~~t~~~N~p----~~~~~~~di~~~~~~~~~~~~~~~~~~~~ 290 (487)
..-+|||++||.||.+.-+... +-.-.++|+|+++.+++..+.|.. .+.+.++|..++... .
T Consensus 101 ~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~Da~~l~~~-------------~ 167 (464)
T 3m6w_A 101 PGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAPLAVTQAPPRALAEA-------------F 167 (464)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCCCEEECSCHHHHHHH-------------H
T ss_pred CCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCeEEEEECCHHHhhhh-------------c
Confidence 5568999999999999888643 111258999999999998887731 256677887765211 1
Q ss_pred CCCCcccEEEccCCCcCcccCCc
Q psy13720 291 PRKGEVEMLCGGPPCQGFSGMNR 313 (487)
Q Consensus 291 p~~~~vd~i~ggpPCq~fS~~~~ 313 (487)
.+.+|+|+.-+||.+.....+
T Consensus 168 --~~~FD~Il~D~PcSg~G~~rr 188 (464)
T 3m6w_A 168 --GTYFHRVLLDAPCSGEGMFRK 188 (464)
T ss_dssp --CSCEEEEEEECCCCCGGGTTT
T ss_pred --cccCCEEEECCCcCCcccccc
Confidence 236899999999988776543
No 43
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=97.14 E-value=0.00091 Score=59.75 Aligned_cols=74 Identities=23% Similarity=0.369 Sum_probs=56.2
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCC------CCceeccchHHHHHHhhchhhhcccccc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP------GCTVFVDDCNKILQRVIDNEVCDDKKQK 289 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p------~~~~~~~di~~~~~~~~~~~~~~~~~~~ 289 (487)
..-++||++||.|.++..+...|. ..++++|+++.+++..+.|.. ...++.+|+.+++..
T Consensus 31 ~~~~vLDlGcG~G~~~~~l~~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~------------- 96 (177)
T 2esr_A 31 NGGRVLDLFAGSGGLAIEAVSRGM-SAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDC------------- 96 (177)
T ss_dssp CSCEEEEETCTTCHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHH-------------
T ss_pred CCCeEEEeCCCCCHHHHHHHHcCC-CEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHh-------------
Confidence 456899999999999999888775 578999999999998887642 345667787664311
Q ss_pred CCCCCcccEEEccCCC
Q psy13720 290 LPRKGEVEMLCGGPPC 305 (487)
Q Consensus 290 ~p~~~~vd~i~ggpPC 305 (487)
. .+.+|+|+..+|.
T Consensus 97 ~--~~~fD~i~~~~~~ 110 (177)
T 2esr_A 97 L--TGRFDLVFLDPPY 110 (177)
T ss_dssp B--CSCEEEEEECCSS
T ss_pred h--cCCCCEEEECCCC
Confidence 1 1358999998874
No 44
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=97.14 E-value=0.0011 Score=58.44 Aligned_cols=77 Identities=23% Similarity=0.280 Sum_probs=58.5
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCC----CCceeccchHHHHHHhhchhhhccccccCC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP----GCTVFVDDCNKILQRVIDNEVCDDKKQKLP 291 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p----~~~~~~~di~~~~~~~~~~~~~~~~~~~~p 291 (487)
..-++||++||.|.++..+...|. + +.++|+++.+++..+.|.. +..++++|+.+.+.... .
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~-~-v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~---------~--- 106 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGW-E-AVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAK---------A--- 106 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTC-E-EEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHH---------H---
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCC-e-EEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhh---------c---
Confidence 445799999999999999999886 5 9999999999988877643 56778888877532210 0
Q ss_pred CCCcccEEEccCCCc
Q psy13720 292 RKGEVEMLCGGPPCQ 306 (487)
Q Consensus 292 ~~~~vd~i~ggpPCq 306 (487)
..+.+|+|+..+|..
T Consensus 107 ~~~~~D~i~~~~~~~ 121 (171)
T 1ws6_A 107 QGERFTVAFMAPPYA 121 (171)
T ss_dssp TTCCEEEEEECCCTT
T ss_pred cCCceEEEEECCCCc
Confidence 113689999998853
No 45
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=97.06 E-value=0.00079 Score=68.32 Aligned_cols=86 Identities=19% Similarity=0.211 Sum_probs=57.5
Q ss_pred CeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhC-----CCCceeccchHHHHHHhhch-hhhccccccCC
Q psy13720 218 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN-----PGCTVFVDDCNKILQRVIDN-EVCDDKKQKLP 291 (487)
Q Consensus 218 l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~-----p~~~~~~~di~~~~~~~~~~-~~~~~~~~~~p 291 (487)
-+++|||||.|++++-+... . .-+.++|+++.|++..+.|. .+...+.+|+.+++...... +.....+..+.
T Consensus 215 ~~vLDl~cG~G~~~l~la~~-~-~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~~ 292 (369)
T 3bt7_A 215 GDLLELYCGNGNFSLALARN-F-DRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDLK 292 (369)
T ss_dssp SEEEEESCTTSHHHHHHGGG-S-SEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSSCCCCTTGGGSCGG
T ss_pred CEEEEccCCCCHHHHHHHhc-C-CEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHhhccccccccccccc
Confidence 46999999999999988764 3 57899999999999888763 34567788888765432110 00000000000
Q ss_pred CCCcccEEEccCCCc
Q psy13720 292 RKGEVEMLCGGPPCQ 306 (487)
Q Consensus 292 ~~~~vd~i~ggpPCq 306 (487)
.+.+|+|+..||..
T Consensus 293 -~~~fD~Vv~dPPr~ 306 (369)
T 3bt7_A 293 -SYQCETIFVDPPRS 306 (369)
T ss_dssp -GCCEEEEEECCCTT
T ss_pred -cCCCCEEEECcCcc
Confidence 12689999999965
No 46
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=97.06 E-value=0.0037 Score=65.20 Aligned_cols=82 Identities=17% Similarity=0.170 Sum_probs=60.5
Q ss_pred CCCeEeecccCchHHHHHHhhc-CCCcEEEEEcCcHHHHHHHHHhC-----CCCceeccchHHHHHHhhchhhhcccccc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMNN-----PGCTVFVDDCNKILQRVIDNEVCDDKKQK 289 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~a-G~~~~~~a~e~~~~a~~t~~~N~-----p~~~~~~~di~~~~~~~~~~~~~~~~~~~ 289 (487)
..-+|||++||.||.++-+... +-.-.++|+|+++.+++..+.|. .++.+.++|...+...
T Consensus 105 ~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~------------- 171 (456)
T 3m4x_A 105 PGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPH------------- 171 (456)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHH-------------
T ss_pred CCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhh-------------
Confidence 5568999999999999887653 21136889999999999888763 3455667787765311
Q ss_pred CCCCCcccEEEccCCCcCcccCC
Q psy13720 290 LPRKGEVEMLCGGPPCQGFSGMN 312 (487)
Q Consensus 290 ~p~~~~vd~i~ggpPCq~fS~~~ 312 (487)
. .+.+|+|+.-+||.|.....
T Consensus 172 ~--~~~FD~Il~DaPCSg~G~~r 192 (456)
T 3m4x_A 172 F--SGFFDRIVVDAPCSGEGMFR 192 (456)
T ss_dssp H--TTCEEEEEEECCCCCGGGTT
T ss_pred c--cccCCEEEECCCCCCccccc
Confidence 1 23689999999998876654
No 47
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=97.04 E-value=0.0074 Score=55.15 Aligned_cols=124 Identities=13% Similarity=0.064 Sum_probs=77.5
Q ss_pred CCCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhC-----CCCceeccchHHHHHHhhchhhhcccccc
Q psy13720 215 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN-----PGCTVFVDDCNKILQRVIDNEVCDDKKQK 289 (487)
Q Consensus 215 ~~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~-----p~~~~~~~di~~~~~~~~~~~~~~~~~~~ 289 (487)
....++||+.||.|.++.-+...+-...+.++|+++.+++..+.|. +...++.+|+.+.
T Consensus 39 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~---------------- 102 (204)
T 3e05_A 39 QDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEG---------------- 102 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTT----------------
T ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhh----------------
Confidence 3567899999999999999988762246899999999998887764 2334445554221
Q ss_pred CCCCCcccEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhhcCCcEEEEecCcchhcccchhHHHHHHHHHHhC
Q psy13720 290 LPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQI 369 (487)
Q Consensus 290 ~p~~~~vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~~~P~~~ilENV~gl~~~~~~~~~~~i~~~l~~~ 369 (487)
++..+.+|+|+.+.+.. + ...++.+. .+.++|.-.++=..... .....+.+.|.+.
T Consensus 103 ~~~~~~~D~i~~~~~~~--------------~-~~~~l~~~---~~~LkpgG~l~~~~~~~------~~~~~~~~~l~~~ 158 (204)
T 3e05_A 103 LDDLPDPDRVFIGGSGG--------------M-LEEIIDAV---DRRLKSEGVIVLNAVTL------DTLTKAVEFLEDH 158 (204)
T ss_dssp CTTSCCCSEEEESCCTT--------------C-HHHHHHHH---HHHCCTTCEEEEEECBH------HHHHHHHHHHHHT
T ss_pred hhcCCCCCEEEECCCCc--------------C-HHHHHHHH---HHhcCCCeEEEEEeccc------ccHHHHHHHHHHC
Confidence 22224689998776542 1 12334433 34467754433222221 2456778888999
Q ss_pred CCeeEEEEE
Q psy13720 370 GYQCTFGTL 378 (487)
Q Consensus 370 GY~~~~~~l 378 (487)
||.+....+
T Consensus 159 g~~~~~~~~ 167 (204)
T 3e05_A 159 GYMVEVACV 167 (204)
T ss_dssp TCEEEEEEE
T ss_pred CCceeEEEE
Confidence 986554443
No 48
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=97.00 E-value=0.0013 Score=67.42 Aligned_cols=74 Identities=18% Similarity=0.135 Sum_probs=56.0
Q ss_pred CCCeEeecccCchHHHHHHhh--cCCCcEEEEEcCcHHHHHHHHHhCC-----C--CceeccchHHHHH-Hhhchhhhcc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDK--SGVARSTWAIEFDSAAATAFKMNNP-----G--CTVFVDDCNKILQ-RVIDNEVCDD 285 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~--aG~~~~~~a~e~~~~a~~t~~~N~p-----~--~~~~~~di~~~~~-~~~~~~~~~~ 285 (487)
..-++||||||.|++++-+.. .|. .-+++||+++.|++..+.|.. + ..++++|+.+++. .
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga-~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~--------- 121 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCV-EKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKE--------- 121 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCE-EEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSC---------
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCC-CEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHh---------
Confidence 346799999999999987655 354 678999999999999887731 2 5677888887642 1
Q ss_pred ccccCCCCCcccEEEccCCC
Q psy13720 286 KKQKLPRKGEVEMLCGGPPC 305 (487)
Q Consensus 286 ~~~~~p~~~~vd~i~ggpPC 305 (487)
+ .+.+|+|+.-|+|
T Consensus 122 ----~--~~~fD~V~lDP~g 135 (392)
T 3axs_A 122 ----W--GFGFDYVDLDPFG 135 (392)
T ss_dssp ----C--SSCEEEEEECCSS
T ss_pred ----h--CCCCcEEEECCCc
Confidence 1 2368999999865
No 49
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=96.99 E-value=0.0034 Score=60.82 Aligned_cols=73 Identities=19% Similarity=0.168 Sum_probs=53.0
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhC-----CCCceeccchHHHHHHhhchhhhccccccC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN-----PGCTVFVDDCNKILQRVIDNEVCDDKKQKL 290 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~-----p~~~~~~~di~~~~~~~~~~~~~~~~~~~~ 290 (487)
..-++||+|||.|+++.-+...+-...++++|+++.|++..+.|. .+...+++|+.++
T Consensus 119 ~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~----------------- 181 (272)
T 3a27_A 119 ENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDV----------------- 181 (272)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGC-----------------
T ss_pred CCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHc-----------------
Confidence 455799999999999998877632246899999999999888764 2344555565321
Q ss_pred CCCCcccEEEccCCC
Q psy13720 291 PRKGEVEMLCGGPPC 305 (487)
Q Consensus 291 p~~~~vd~i~ggpPC 305 (487)
+..+.+|+|+..||.
T Consensus 182 ~~~~~~D~Vi~d~p~ 196 (272)
T 3a27_A 182 ELKDVADRVIMGYVH 196 (272)
T ss_dssp CCTTCEEEEEECCCS
T ss_pred CccCCceEEEECCcc
Confidence 113478999999984
No 50
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=96.98 E-value=0.0037 Score=61.97 Aligned_cols=81 Identities=16% Similarity=0.183 Sum_probs=58.8
Q ss_pred CCCeEeecccCchHHHHHHhhcC-CCcEEEEEcCcHHHHHHHHHhC-----CCCceeccchHHHHHHhhchhhhcccccc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSG-VARSTWAIEFDSAAATAFKMNN-----PGCTVFVDDCNKILQRVIDNEVCDDKKQK 289 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG-~~~~~~a~e~~~~a~~t~~~N~-----p~~~~~~~di~~~~~~~~~~~~~~~~~~~ 289 (487)
..-++||++||.|+.+.-+.... -.-.++|+|+++.+++..+.|. ++..+.++|+.++. .
T Consensus 118 ~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~-------------~- 183 (315)
T 1ixk_A 118 PGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIG-------------E- 183 (315)
T ss_dssp TTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGG-------------G-
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcc-------------c-
Confidence 45689999999999998887531 1136899999999998887764 34556666765431 0
Q ss_pred CCCCCcccEEEccCCCcCcccCC
Q psy13720 290 LPRKGEVEMLCGGPPCQGFSGMN 312 (487)
Q Consensus 290 ~p~~~~vd~i~ggpPCq~fS~~~ 312 (487)
..+.+|+|+..+||.+.....
T Consensus 184 --~~~~fD~Il~d~Pcsg~g~~~ 204 (315)
T 1ixk_A 184 --LNVEFDKILLDAPCTGSGTIH 204 (315)
T ss_dssp --GCCCEEEEEEECCTTSTTTCC
T ss_pred --ccccCCEEEEeCCCCCccccc
Confidence 124699999999998877654
No 51
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=96.91 E-value=0.0021 Score=57.59 Aligned_cols=76 Identities=25% Similarity=0.309 Sum_probs=56.4
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhC------CCCceeccchHHHHHHhhchhhhcccccc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN------PGCTVFVDDCNKILQRVIDNEVCDDKKQK 289 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~------p~~~~~~~di~~~~~~~~~~~~~~~~~~~ 289 (487)
+.-++||++||.|+++..+...|. .-+.++|+++.+++..+.|. +...++.+|+.+++....
T Consensus 44 ~~~~vLD~GcG~G~~~~~~~~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~----------- 111 (187)
T 2fhp_A 44 DGGMALDLYSGSGGLAIEAVSRGM-DKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFY----------- 111 (187)
T ss_dssp SSCEEEETTCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHH-----------
T ss_pred CCCCEEEeCCccCHHHHHHHHcCC-CEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHH-----------
Confidence 456899999999999998777775 57899999999988877764 235677788876532110
Q ss_pred CCCCCcccEEEccCC
Q psy13720 290 LPRKGEVEMLCGGPP 304 (487)
Q Consensus 290 ~p~~~~vd~i~ggpP 304 (487)
. ..+.+|+|+..+|
T Consensus 112 ~-~~~~fD~i~~~~~ 125 (187)
T 2fhp_A 112 E-EKLQFDLVLLDPP 125 (187)
T ss_dssp H-TTCCEEEEEECCC
T ss_pred h-cCCCCCEEEECCC
Confidence 0 1236899999888
No 52
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=96.91 E-value=0.032 Score=51.13 Aligned_cols=75 Identities=20% Similarity=0.364 Sum_probs=56.2
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCCCCceeccchHHHHHHhhchhhhccccccCCCCCc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGE 295 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p~~~~~~~di~~~~~~~~~~~~~~~~~~~~p~~~~ 295 (487)
...++||+-||.|.++.-+...|. .+.++|+++.+++..+.+ +.......|+.++.. ...+..+.
T Consensus 52 ~~~~vLdiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~-~~~~~~~~~~~~~~~------------~~~~~~~~ 116 (227)
T 3e8s_A 52 QPERVLDLGCGEGWLLRALADRGI--EAVGVDGDRTLVDAARAA-GAGEVHLASYAQLAE------------AKVPVGKD 116 (227)
T ss_dssp CCSEEEEETCTTCHHHHHHHTTTC--EEEEEESCHHHHHHHHHT-CSSCEEECCHHHHHT------------TCSCCCCC
T ss_pred CCCEEEEeCCCCCHHHHHHHHCCC--EEEEEcCCHHHHHHHHHh-cccccchhhHHhhcc------------cccccCCC
Confidence 457899999999999999988886 578999999999988877 566677778766521 11222335
Q ss_pred ccEEEccCCC
Q psy13720 296 VEMLCGGPPC 305 (487)
Q Consensus 296 vd~i~ggpPC 305 (487)
+|+|+....-
T Consensus 117 fD~v~~~~~l 126 (227)
T 3e8s_A 117 YDLICANFAL 126 (227)
T ss_dssp EEEEEEESCC
T ss_pred ccEEEECchh
Confidence 9999876543
No 53
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=96.88 E-value=0.0059 Score=54.73 Aligned_cols=73 Identities=8% Similarity=0.049 Sum_probs=50.9
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhC-----CCCceeccchHHHHHHhhchhhhccccccC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN-----PGCTVFVDDCNKILQRVIDNEVCDDKKQKL 290 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~-----p~~~~~~~di~~~~~~~~~~~~~~~~~~~~ 290 (487)
..-++||+.||.|.++.-+...|. .++++|+++.+++.-+.|. ++..++.+|...+ ...
T Consensus 22 ~~~~vLDiGcG~G~~~~~la~~~~--~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l--------------~~~ 85 (185)
T 3mti_A 22 DESIVVDATMGNGNDTAFLAGLSK--KVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENL--------------DHY 85 (185)
T ss_dssp TTCEEEESCCTTSHHHHHHHTTSS--EEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGG--------------GGT
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCC--EEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHH--------------Hhh
Confidence 456899999999999999988764 6899999999988877664 3334444444322 011
Q ss_pred CCCCcccEEEccCCC
Q psy13720 291 PRKGEVEMLCGGPPC 305 (487)
Q Consensus 291 p~~~~vd~i~ggpPC 305 (487)
+ .+.+|+|+..++.
T Consensus 86 ~-~~~fD~v~~~~~~ 99 (185)
T 3mti_A 86 V-REPIRAAIFNLGY 99 (185)
T ss_dssp C-CSCEEEEEEEEC-
T ss_pred c-cCCcCEEEEeCCC
Confidence 2 3479999877543
No 54
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=96.87 E-value=0.015 Score=54.09 Aligned_cols=69 Identities=14% Similarity=0.177 Sum_probs=51.0
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCC----CCceeccchHHHHHHhhchhhhccccccCC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP----GCTVFVDDCNKILQRVIDNEVCDDKKQKLP 291 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p----~~~~~~~di~~~~~~~~~~~~~~~~~~~~p 291 (487)
+..++||+-||.|.++.-+...|. -+.++|+++.+++..+.+.+ .......|+.+ ++
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~~~--~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~-----------------~~ 97 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPKFK--NTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISN-----------------LN 97 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGGSS--EEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGG-----------------CC
T ss_pred CCCeEEEeCCCCCHHHHHHHHCCC--cEEEEECCHHHHHHHHHHHhhcCCCeEEEeccccc-----------------CC
Confidence 456899999999999999988885 48899999998887776643 34555555532 12
Q ss_pred CCCcccEEEccC
Q psy13720 292 RKGEVEMLCGGP 303 (487)
Q Consensus 292 ~~~~vd~i~ggp 303 (487)
..+.+|+|+...
T Consensus 98 ~~~~fD~v~~~~ 109 (246)
T 1y8c_A 98 INRKFDLITCCL 109 (246)
T ss_dssp CSCCEEEEEECT
T ss_pred ccCCceEEEEcC
Confidence 225799998654
No 55
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=96.87 E-value=0.016 Score=54.99 Aligned_cols=69 Identities=16% Similarity=0.131 Sum_probs=55.6
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCCCCceeccchHHHHHHhhchhhhccccccCCCCCc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGE 295 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p~~~~~~~di~~~~~~~~~~~~~~~~~~~~p~~~~ 295 (487)
...++||+-||.|.++.-+...|. -+.++|+++.+++.-+.+.++..++.+|+.+ ++..+.
T Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~-----------------~~~~~~ 110 (263)
T 3pfg_A 50 KAASLLDVACGTGMHLRHLADSFG--TVEGLELSADMLAIARRRNPDAVLHHGDMRD-----------------FSLGRR 110 (263)
T ss_dssp TCCEEEEETCTTSHHHHHHTTTSS--EEEEEESCHHHHHHHHHHCTTSEEEECCTTT-----------------CCCSCC
T ss_pred CCCcEEEeCCcCCHHHHHHHHcCC--eEEEEECCHHHHHHHHhhCCCCEEEECChHH-----------------CCccCC
Confidence 456899999999999999998885 5789999999999999998877777777643 222457
Q ss_pred ccEEEccC
Q psy13720 296 VEMLCGGP 303 (487)
Q Consensus 296 vd~i~ggp 303 (487)
+|+|+...
T Consensus 111 fD~v~~~~ 118 (263)
T 3pfg_A 111 FSAVTCMF 118 (263)
T ss_dssp EEEEEECT
T ss_pred cCEEEEcC
Confidence 99998654
No 56
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=96.85 E-value=0.047 Score=52.81 Aligned_cols=150 Identities=14% Similarity=0.131 Sum_probs=95.0
Q ss_pred CCCeEeecccCchHHHHHHhhc-CCCcEEEEEcCcHHHHHHHHHhC---------CCCceeccchHHHHHHhhchhhhcc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMNN---------PGCTVFVDDCNKILQRVIDNEVCDD 285 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~a-G~~~~~~a~e~~~~a~~t~~~N~---------p~~~~~~~di~~~~~~~~~~~~~~~ 285 (487)
.+.++|||.||.|+++.-+... |. .-+.++|+|+.+++.-+.|+ +...++.+|..+++..
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~-~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~--------- 144 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSV-KKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAK--------- 144 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTC-SEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHT---------
T ss_pred CCCEEEEECCchHHHHHHHHhCCCC-ceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhh---------
Confidence 3467999999999999888765 65 67899999999999888876 3455677787665321
Q ss_pred ccccCCCCCcccEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhhcCCcEEEEecCcchhcccchhHHHHHHHH
Q psy13720 286 KKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRC 365 (487)
Q Consensus 286 ~~~~~p~~~~vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~~~P~~~ilENV~gl~~~~~~~~~~~i~~~ 365 (487)
..+.+|+|+..+|.. ...... .....++.. +.+.++|.-+++=|...-. .....+..+++.
T Consensus 145 ------~~~~fD~Ii~d~~~~-~~~~~~-------l~~~~~~~~---~~~~L~pgG~lv~~~~~~~--~~~~~~~~~~~~ 205 (275)
T 1iy9_A 145 ------SENQYDVIMVDSTEP-VGPAVN-------LFTKGFYAG---IAKALKEDGIFVAQTDNPW--FTPELITNVQRD 205 (275)
T ss_dssp ------CCSCEEEEEESCSSC-CSCCCC-------CSTTHHHHH---HHHHEEEEEEEEEECCCTT--TCHHHHHHHHHH
T ss_pred ------CCCCeeEEEECCCCC-CCcchh-------hhHHHHHHH---HHHhcCCCcEEEEEcCCcc--ccHHHHHHHHHH
Confidence 124689999987752 221111 111233333 3456788876665553311 123457788888
Q ss_pred HHhCCCeeEEEEEeccCCCCCC--cccEEEEEEEcC
Q psy13720 366 LTQIGYQCTFGTLQAGHFGVSQ--TRRRAIVLAAAP 399 (487)
Q Consensus 366 l~~~GY~~~~~~l~a~~yGvPQ--~R~R~fiia~~~ 399 (487)
|.+..=.+...... +|. ...-.|++|++.
T Consensus 206 l~~~F~~v~~~~~~-----vp~~~~g~w~~~~ask~ 236 (275)
T 1iy9_A 206 VKEIFPITKLYTAN-----IPTYPSGLWTFTIGSKK 236 (275)
T ss_dssp HHTTCSEEEEEEEC-----CTTSGGGCEEEEEEESS
T ss_pred HHHhCCCeEEEEEe-----cCcccCcceEEEEeeCC
Confidence 88774444433222 344 346788888864
No 57
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=96.83 E-value=0.0098 Score=54.85 Aligned_cols=134 Identities=13% Similarity=0.122 Sum_probs=78.9
Q ss_pred CCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhC-----CCCceeccchHHHHHHhhchhhhccccccCC
Q psy13720 217 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN-----PGCTVFVDDCNKILQRVIDNEVCDDKKQKLP 291 (487)
Q Consensus 217 ~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~-----p~~~~~~~di~~~~~~~~~~~~~~~~~~~~p 291 (487)
.-++|||.||.|.++..+....-..-+.++|+++.+++..+.|. ++..++.+|+.++ ...++
T Consensus 42 ~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~-------------~~~~~ 108 (214)
T 1yzh_A 42 NPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDL-------------TDYFE 108 (214)
T ss_dssp CCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCG-------------GGTSC
T ss_pred CCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHH-------------HhhcC
Confidence 45799999999999998876632136899999999988777653 3445566665432 11122
Q ss_pred CCCcccEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhhcCCcE-EEEecCcchhcccchhHHHHHHHHHHhCC
Q psy13720 292 RKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRF-FLLENVRNFVAFKNSMVLKMTMRCLTQIG 370 (487)
Q Consensus 292 ~~~~vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~~~P~~-~ilENV~gl~~~~~~~~~~~i~~~l~~~G 370 (487)
.+.+|+|+..+|..-... .+ ..+. .....++..+ ...++|.- ++++- .....+..+++.|.+.|
T Consensus 109 -~~~~D~i~~~~~~~~~~~-~~-~~~~--~~~~~~l~~~---~~~LkpgG~l~~~~-------~~~~~~~~~~~~~~~~g 173 (214)
T 1yzh_A 109 -DGEIDRLYLNFSDPWPKK-RH-EKRR--LTYKTFLDTF---KRILPENGEIHFKT-------DNRGLFEYSLVSFSQYG 173 (214)
T ss_dssp -TTCCSEEEEESCCCCCSG-GG-GGGS--TTSHHHHHHH---HHHSCTTCEEEEEE-------SCHHHHHHHHHHHHHHT
T ss_pred -CCCCCEEEEECCCCcccc-ch-hhhc--cCCHHHHHHH---HHHcCCCcEEEEEe-------CCHHHHHHHHHHHHHCC
Confidence 346899998877432221 10 0010 0112233333 34467763 44431 12234567788888889
Q ss_pred CeeEEEEE
Q psy13720 371 YQCTFGTL 378 (487)
Q Consensus 371 Y~~~~~~l 378 (487)
|.+.....
T Consensus 174 ~~~~~~~~ 181 (214)
T 1yzh_A 174 MKLNGVWL 181 (214)
T ss_dssp CEEEEEES
T ss_pred Ceeeeccc
Confidence 98755443
No 58
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=96.83 E-value=0.013 Score=52.09 Aligned_cols=122 Identities=18% Similarity=0.251 Sum_probs=77.6
Q ss_pred CCCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhC------CCCceeccchHHHHHHhhchhhhccccc
Q psy13720 215 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN------PGCTVFVDDCNKILQRVIDNEVCDDKKQ 288 (487)
Q Consensus 215 ~~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~------p~~~~~~~di~~~~~~~~~~~~~~~~~~ 288 (487)
.+..++||+.||.|.++.-+...+ ..+.++|+++.+++..+.|. +...+...|+.+.+
T Consensus 32 ~~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-------------- 95 (192)
T 1l3i_A 32 GKNDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEAL-------------- 95 (192)
T ss_dssp CTTCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHH--------------
T ss_pred CCCCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhc--------------
Confidence 355689999999999999998877 36889999999988877653 23445666765421
Q ss_pred cCCCCCcccEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhhcCCcEEEEecCcchhcccchhHHHHHHHHHHh
Q psy13720 289 KLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQ 368 (487)
Q Consensus 289 ~~p~~~~vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~~~P~~~ilENV~gl~~~~~~~~~~~i~~~l~~ 368 (487)
+..+.+|+|+...+.. + ...++.. +.+.++|.-.++=.... ......+.+.|.+
T Consensus 96 --~~~~~~D~v~~~~~~~--------------~-~~~~l~~---~~~~l~~gG~l~~~~~~------~~~~~~~~~~l~~ 149 (192)
T 1l3i_A 96 --CKIPDIDIAVVGGSGG--------------E-LQEILRI---IKDKLKPGGRIIVTAIL------LETKFEAMECLRD 149 (192)
T ss_dssp --TTSCCEEEEEESCCTT--------------C-HHHHHHH---HHHTEEEEEEEEEEECB------HHHHHHHHHHHHH
T ss_pred --ccCCCCCEEEECCchH--------------H-HHHHHHH---HHHhcCCCcEEEEEecC------cchHHHHHHHHHH
Confidence 1113689998775531 0 1223333 33456776433322211 2345678888899
Q ss_pred CCCeeEEEEE
Q psy13720 369 IGYQCTFGTL 378 (487)
Q Consensus 369 ~GY~~~~~~l 378 (487)
.||.+....+
T Consensus 150 ~g~~~~~~~~ 159 (192)
T 1l3i_A 150 LGFDVNITEL 159 (192)
T ss_dssp TTCCCEEEEE
T ss_pred CCCceEEEEE
Confidence 9997665443
No 59
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=96.78 E-value=0.0033 Score=64.08 Aligned_cols=75 Identities=15% Similarity=0.174 Sum_probs=55.8
Q ss_pred CCCeEeecccCchHHHHHHhhc-CCCcEEEEEcCcHHHHHHHHHhC------------------C--CCceeccchHHHH
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMNN------------------P--GCTVFVDDCNKIL 274 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~a-G~~~~~~a~e~~~~a~~t~~~N~------------------p--~~~~~~~di~~~~ 274 (487)
...++||+|||.|++++.+... |- .-++++|+++.|++.-+.|. . +..++++|+.+++
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~-~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~ 125 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPA-EEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLM 125 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSC-SEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCC-CeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHH
Confidence 3567999999999999987664 53 34899999999999888763 1 1456778887764
Q ss_pred HHhhchhhhccccccCCCCCcccEEEccCCCc
Q psy13720 275 QRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQ 306 (487)
Q Consensus 275 ~~~~~~~~~~~~~~~~p~~~~vd~i~ggpPCq 306 (487)
.. . .+.+|+|+.-|||.
T Consensus 126 ~~-------------~--~~~fD~I~lDP~~~ 142 (378)
T 2dul_A 126 AE-------------R--HRYFHFIDLDPFGS 142 (378)
T ss_dssp HH-------------S--TTCEEEEEECCSSC
T ss_pred Hh-------------c--cCCCCEEEeCCCCC
Confidence 22 1 13589999999874
No 60
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=96.77 E-value=0.037 Score=54.17 Aligned_cols=152 Identities=13% Similarity=0.108 Sum_probs=89.3
Q ss_pred CCeEeecccCchHHHHHHhhc-CCCcEEEEEcCcHHHHHHHHHhC---------CCCceeccchHHHHHHhhchhhhccc
Q psy13720 217 PLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMNN---------PGCTVFVDDCNKILQRVIDNEVCDDK 286 (487)
Q Consensus 217 ~l~~ldLFsG~Gg~s~Gl~~a-G~~~~~~a~e~~~~a~~t~~~N~---------p~~~~~~~di~~~~~~~~~~~~~~~~ 286 (487)
+.++|||.||.|+++.-+... +. ..+.++|+|+.+++.-+.|+ +...++.+|..+++..
T Consensus 91 ~~~VLdiG~G~G~~~~~l~~~~~~-~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~---------- 159 (296)
T 1inl_A 91 PKKVLIIGGGDGGTLREVLKHDSV-EKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRK---------- 159 (296)
T ss_dssp CCEEEEEECTTCHHHHHHTTSTTC-SEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGG----------
T ss_pred CCEEEEEcCCcCHHHHHHHhcCCC-CEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhh----------
Confidence 458999999999999998776 54 57899999999999888776 3455667777654210
Q ss_pred cccCCCCCcccEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhhcCCcEEEEecCcchhcccchhHHHHHHHHH
Q psy13720 287 KQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCL 366 (487)
Q Consensus 287 ~~~~p~~~~vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~~~P~~~ilENV~gl~~~~~~~~~~~i~~~l 366 (487)
..+.+|+|+..+|+........ .....++.. +.+.++|.-+++=+..... .....+..+++.|
T Consensus 160 -----~~~~fD~Ii~d~~~~~~~~~~~-------l~~~~~l~~---~~~~LkpgG~lv~~~~~~~--~~~~~~~~~~~~l 222 (296)
T 1inl_A 160 -----FKNEFDVIIIDSTDPTAGQGGH-------LFTEEFYQA---CYDALKEDGVFSAETEDPF--YDIGWFKLAYRRI 222 (296)
T ss_dssp -----CSSCEEEEEEEC-----------------CCSHHHHHH---HHHHEEEEEEEEEECCCTT--TTHHHHHHHHHHH
T ss_pred -----CCCCceEEEEcCCCcccCchhh-------hhHHHHHHH---HHHhcCCCcEEEEEccCcc--cCHHHHHHHHHHH
Confidence 1246899999888742221110 011223333 3456788865554543211 1223566777777
Q ss_pred HhCCCeeEEEEEeccCCCCCCcccEEEEEEEcC
Q psy13720 367 TQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAP 399 (487)
Q Consensus 367 ~~~GY~~~~~~l~a~~yGvPQ~R~R~fiia~~~ 399 (487)
.+..=.+......--.| | ...-.|++|++.
T Consensus 223 ~~~F~~v~~~~~~vp~~--p-~g~~~f~~as~~ 252 (296)
T 1inl_A 223 SKVFPITRVYLGFMTTY--P-SGMWSYTFASKG 252 (296)
T ss_dssp HHHCSEEEEEEEECTTS--T-TSEEEEEEEESS
T ss_pred HHHCCceEEEEeecCcc--C-CCceEEEEecCC
Confidence 77644444333322222 1 456778888864
No 61
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=96.73 E-value=0.0021 Score=63.65 Aligned_cols=85 Identities=18% Similarity=0.240 Sum_probs=55.3
Q ss_pred CCCeEeecccCchHHHHHHhhc-CCCcEEEEEcCcHHHHHHHHHhC-----CCCceeccchHHHHHHhhchhhhcccccc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMNN-----PGCTVFVDDCNKILQRVIDNEVCDDKKQK 289 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~a-G~~~~~~a~e~~~~a~~t~~~N~-----p~~~~~~~di~~~~~~~~~~~~~~~~~~~ 289 (487)
..-+|||+|||.||.+.-+... +-.-.++|+|+++.+++..+.|. .++.++.+|..++. ..
T Consensus 102 ~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~-------------~~ 168 (309)
T 2b9e_A 102 PGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVS-------------PS 168 (309)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSC-------------TT
T ss_pred CCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcC-------------cc
Confidence 4568999999999999887653 21136899999999999888774 23445556654320 00
Q ss_pred CCCCCcccEEEccCCCcCcccCCc
Q psy13720 290 LPRKGEVEMLCGGPPCQGFSGMNR 313 (487)
Q Consensus 290 ~p~~~~vd~i~ggpPCq~fS~~~~ 313 (487)
.+..+.+|.|+.-+||.+.-...+
T Consensus 169 ~~~~~~fD~Vl~D~PcSg~G~~~r 192 (309)
T 2b9e_A 169 DPRYHEVHYILLDPSCSGSGMPSR 192 (309)
T ss_dssp CGGGTTEEEEEECCCCCC------
T ss_pred ccccCCCCEEEEcCCcCCCCCCcc
Confidence 111136899999999998776543
No 62
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=96.72 E-value=0.023 Score=52.12 Aligned_cols=69 Identities=17% Similarity=0.152 Sum_probs=54.4
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCC-CCceeccchHHHHHHhhchhhhccccccCCCCC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP-GCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKG 294 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p-~~~~~~~di~~~~~~~~~~~~~~~~~~~~p~~~ 294 (487)
+..++||+-||.|.++.-+...|. -+.++|+++.+++..+.+.+ +..+..+|+.+ +|..+
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~-----------------~~~~~ 105 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLAGR--TVYGIEPSREMRMIAKEKLPKEFSITEGDFLS-----------------FEVPT 105 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHTTC--EEEEECSCHHHHHHHHHHSCTTCCEESCCSSS-----------------CCCCS
T ss_pred CCCeEEEeCCCCCHHHHHHHhCCC--eEEEEeCCHHHHHHHHHhCCCceEEEeCChhh-----------------cCCCC
Confidence 567899999999999999988885 57899999999999998887 56666666532 22226
Q ss_pred cccEEEccC
Q psy13720 295 EVEMLCGGP 303 (487)
Q Consensus 295 ~vd~i~ggp 303 (487)
.+|+|+...
T Consensus 106 ~fD~v~~~~ 114 (220)
T 3hnr_A 106 SIDTIVSTY 114 (220)
T ss_dssp CCSEEEEES
T ss_pred CeEEEEECc
Confidence 799998764
No 63
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=96.71 E-value=0.016 Score=52.45 Aligned_cols=76 Identities=11% Similarity=0.065 Sum_probs=53.3
Q ss_pred CCCCeEeecccCchHHHHHHhhc-CCCcEEEEEcCcHHHHHHHHHhC------CCCceeccchHHHHHHhhchhhhcccc
Q psy13720 215 ARPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMNN------PGCTVFVDDCNKILQRVIDNEVCDDKK 287 (487)
Q Consensus 215 ~~~l~~ldLFsG~Gg~s~Gl~~a-G~~~~~~a~e~~~~a~~t~~~N~------p~~~~~~~di~~~~~~~~~~~~~~~~~ 287 (487)
++..++||+.||.|.++.-+... |-...++++|+++.+++.-+.|. +...++++|+.++.
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~------------- 87 (197)
T 3eey_A 21 KEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMD------------- 87 (197)
T ss_dssp CTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGG-------------
T ss_pred CCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHh-------------
Confidence 34568999999999999887665 21136899999999988877763 23455666654331
Q ss_pred ccCCCCCcccEEEccCCC
Q psy13720 288 QKLPRKGEVEMLCGGPPC 305 (487)
Q Consensus 288 ~~~p~~~~vd~i~ggpPC 305 (487)
... .+.+|+|+..+|-
T Consensus 88 ~~~--~~~fD~v~~~~~~ 103 (197)
T 3eey_A 88 KYI--DCPVKAVMFNLGY 103 (197)
T ss_dssp GTC--CSCEEEEEEEESB
T ss_pred hhc--cCCceEEEEcCCc
Confidence 011 2579999988766
No 64
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=96.70 E-value=0.0039 Score=58.22 Aligned_cols=115 Identities=15% Similarity=0.123 Sum_probs=76.0
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCCCCceeccchHHHHHHhhchhhhccccccCCCCCc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGE 295 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p~~~~~~~di~~~~~~~~~~~~~~~~~~~~p~~~~ 295 (487)
...++||+.||.|.++.-+...|. .+.++|+++.+++..+.|.++..+.++|+.+. ..++..+.
T Consensus 48 ~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~--------------~~~~~~~~ 111 (226)
T 3m33_A 48 PQTRVLEAGCGHGPDAARFGPQAA--RWAAYDFSPELLKLARANAPHADVYEWNGKGE--------------LPAGLGAP 111 (226)
T ss_dssp TTCEEEEESCTTSHHHHHHGGGSS--EEEEEESCHHHHHHHHHHCTTSEEEECCSCSS--------------CCTTCCCC
T ss_pred CCCeEEEeCCCCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHhCCCceEEEcchhhc--------------cCCcCCCC
Confidence 557899999999999999998885 67899999999999999988777777775311 01111357
Q ss_pred ccEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhhcCCcEEEEecCcchhcccchhHHHHHHHHHHhCCCeeE
Q psy13720 296 VEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCT 374 (487)
Q Consensus 296 vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~~~P~~~ilENV~gl~~~~~~~~~~~i~~~l~~~GY~~~ 374 (487)
+|+|+..+ . . ..++.+ +.+.++|.-.+++ +.+.. ....+.+.|.+.|+.+.
T Consensus 112 fD~v~~~~--------~---------~-~~~l~~---~~~~LkpgG~l~~-~~~~~------~~~~~~~~l~~~Gf~~~ 162 (226)
T 3m33_A 112 FGLIVSRR--------G---------P-TSVILR---LPELAAPDAHFLY-VGPRL------NVPEVPERLAAVGWDIV 162 (226)
T ss_dssp EEEEEEES--------C---------C-SGGGGG---HHHHEEEEEEEEE-EESSS------CCTHHHHHHHHTTCEEE
T ss_pred EEEEEeCC--------C---------H-HHHHHH---HHHHcCCCcEEEE-eCCcC------CHHHHHHHHHHCCCeEE
Confidence 99998651 0 0 112222 2345678777771 11111 23456677777887653
No 65
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=96.67 E-value=0.0092 Score=60.48 Aligned_cols=126 Identities=12% Similarity=0.095 Sum_probs=77.5
Q ss_pred CCCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCC------CCceeccchHHHHHHhhchhhhccccc
Q psy13720 215 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP------GCTVFVDDCNKILQRVIDNEVCDDKKQ 288 (487)
Q Consensus 215 ~~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p------~~~~~~~di~~~~~~~~~~~~~~~~~~ 288 (487)
...-++||++||.|++..-+...|....++++|+++.+++.-+.|.. ...+..+|+.++.
T Consensus 216 ~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~-------------- 281 (373)
T 3tm4_A 216 LDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLS-------------- 281 (373)
T ss_dssp CCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGG--------------
T ss_pred CCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCC--------------
Confidence 35668999999999999988877642268999999999998887742 3345566654320
Q ss_pred cCCCCCcccEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhh-cCCcEEEEecCcchhcccchhHHHHHHHHHH
Q psy13720 289 KLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDY-YRPRFFLLENVRNFVAFKNSMVLKMTMRCLT 367 (487)
Q Consensus 289 ~~p~~~~vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~-~~P~~~ilENV~gl~~~~~~~~~~~i~~~l~ 367 (487)
. ..+.+|+|+..||.--.. + .......|+..+++.+.. +.+..+++-. . ...+.+.+.
T Consensus 282 -~-~~~~fD~Ii~npPyg~r~--~------~~~~~~~ly~~~~~~l~r~l~g~~~~i~~--------~---~~~~~~~~~ 340 (373)
T 3tm4_A 282 -Q-YVDSVDFAISNLPYGLKI--G------KKSMIPDLYMKFFNELAKVLEKRGVFITT--------E---KKAIEEAIA 340 (373)
T ss_dssp -G-TCSCEEEEEEECCCC--------------CCHHHHHHHHHHHHHHHEEEEEEEEES--------C---HHHHHHHHH
T ss_pred -c-ccCCcCEEEECCCCCccc--C------cchhHHHHHHHHHHHHHHHcCCeEEEEEC--------C---HHHHHHHHH
Confidence 1 124799999999952211 1 011123455555555544 3455555532 1 123445667
Q ss_pred hCCCeeEE
Q psy13720 368 QIGYQCTF 375 (487)
Q Consensus 368 ~~GY~~~~ 375 (487)
+.|+.+..
T Consensus 341 ~~G~~~~~ 348 (373)
T 3tm4_A 341 ENGFEIIH 348 (373)
T ss_dssp HTTEEEEE
T ss_pred HcCCEEEE
Confidence 78988654
No 66
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=96.66 E-value=0.0091 Score=61.82 Aligned_cols=119 Identities=18% Similarity=0.209 Sum_probs=75.6
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhC-----CCCceeccchHHHHHHhhchhhhccccccC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN-----PGCTVFVDDCNKILQRVIDNEVCDDKKQKL 290 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~-----p~~~~~~~di~~~~~~~~~~~~~~~~~~~~ 290 (487)
..-++|||+||.|.+++-+...+ .-+.++|+++.|++.-+.|. .+...+.+|+.+.+ ..+
T Consensus 286 ~~~~VLDlgcG~G~~~~~la~~~--~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l-------------~~~ 350 (433)
T 1uwv_A 286 PEDRVLDLFCGMGNFTLPLATQA--ASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDV-------------TKQ 350 (433)
T ss_dssp TTCEEEEESCTTTTTHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCC-------------SSS
T ss_pred CCCEEEECCCCCCHHHHHHHhhC--CEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHh-------------hhh
Confidence 44689999999999999998775 46899999999998887764 23445566654321 001
Q ss_pred C-CCCcccEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhhcCCcEEEEecCcchhcccchhHHHHHHHHHHhC
Q psy13720 291 P-RKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQI 369 (487)
Q Consensus 291 p-~~~~vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~~~P~~~ilENV~gl~~~~~~~~~~~i~~~l~~~ 369 (487)
| ..+.+|+|+.-||..+.. ++++.+...+|..++.= + .+...+..-+..|.+.
T Consensus 351 ~~~~~~fD~Vv~dPPr~g~~-------------------~~~~~l~~~~p~~ivyv------s-c~p~tlard~~~l~~~ 404 (433)
T 1uwv_A 351 PWAKNGFDKVLLDPARAGAA-------------------GVMQQIIKLEPIRIVYV------S-CNPATLARDSEALLKA 404 (433)
T ss_dssp GGGTTCCSEEEECCCTTCCH-------------------HHHHHHHHHCCSEEEEE------E-SCHHHHHHHHHHHHHT
T ss_pred hhhcCCCCEEEECCCCccHH-------------------HHHHHHHhcCCCeEEEE------E-CChHHHHhhHHHHHHC
Confidence 1 123689999999953211 12233445678765531 1 1112333445667778
Q ss_pred CCeeEE
Q psy13720 370 GYQCTF 375 (487)
Q Consensus 370 GY~~~~ 375 (487)
||++..
T Consensus 405 Gy~~~~ 410 (433)
T 1uwv_A 405 GYTIAR 410 (433)
T ss_dssp TCEEEE
T ss_pred CcEEEE
Confidence 999865
No 67
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=96.65 E-value=0.027 Score=51.01 Aligned_cols=145 Identities=14% Similarity=0.015 Sum_probs=91.9
Q ss_pred CCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCCCCceeccchHHHHHHhhchhhhccccccCCCCCcc
Q psy13720 217 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEV 296 (487)
Q Consensus 217 ~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p~~~~~~~di~~~~~~~~~~~~~~~~~~~~p~~~~v 296 (487)
..++||+.||.|.++.-+...|. -+.++|+++.+++.-+.+.++.....+|+.++ .++ .+.+
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~---------------~~~-~~~f 103 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGH--QIEGLEPATRLVELARQTHPSVTFHHGTITDL---------------SDS-PKRW 103 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTC--CEEEECCCHHHHHHHHHHCTTSEEECCCGGGG---------------GGS-CCCE
T ss_pred CCeEEEecCCCCHHHHHHHhcCC--eEEEEeCCHHHHHHHHHhCCCCeEEeCccccc---------------ccC-CCCe
Confidence 67899999999999999988886 57899999999999999988888888887543 011 2578
Q ss_pred cEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhhcCCcEEEEecCcchhc---c------cchhHHHHHHHHHH
Q psy13720 297 EMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVA---F------KNSMVLKMTMRCLT 367 (487)
Q Consensus 297 d~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~~~P~~~ilENV~gl~~---~------~~~~~~~~i~~~l~ 367 (487)
|+|+....-..++ ..+ ...++.++ .+.++|.-.++=.+..-.. . ........+.+.|.
T Consensus 104 D~v~~~~~l~~~~---------~~~-~~~~l~~~---~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 170 (203)
T 3h2b_A 104 AGLLAWYSLIHMG---------PGE-LPDALVAL---RMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALE 170 (203)
T ss_dssp EEEEEESSSTTCC---------TTT-HHHHHHHH---HHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHH
T ss_pred EEEEehhhHhcCC---------HHH-HHHHHHHH---HHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHH
Confidence 9998753221111 011 22334443 3456775433322211110 0 01123577888899
Q ss_pred hCCCeeEEEEEeccCCCCCCcccEEEEEEEcC
Q psy13720 368 QIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAP 399 (487)
Q Consensus 368 ~~GY~~~~~~l~a~~yGvPQ~R~R~fiia~~~ 399 (487)
+.|+.+........ |...+++..+.
T Consensus 171 ~~Gf~~~~~~~~~~-------~p~~~l~~~~~ 195 (203)
T 3h2b_A 171 TAGFQVTSSHWDPR-------FPHAYLTAEAS 195 (203)
T ss_dssp HTTEEEEEEEECTT-------SSEEEEEEEEC
T ss_pred HCCCcEEEEEecCC-------Ccchhhhhhhh
Confidence 99998765543332 66777777654
No 68
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=96.64 E-value=0.046 Score=49.90 Aligned_cols=148 Identities=11% Similarity=-0.018 Sum_probs=86.3
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCCCCceeccchHHHHHHhhchhhhccccccCCCCCc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGE 295 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p~~~~~~~di~~~~~~~~~~~~~~~~~~~~p~~~~ 295 (487)
+..++||+-||.|.++.-+...|. .+.++|+++.+++..+.+. +......|+.. ++..+.
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~-~~~~~~~d~~~-----------------~~~~~~ 102 (211)
T 3e23_A 43 AGAKILELGCGAGYQAEAMLAAGF--DVDATDGSPELAAEASRRL-GRPVRTMLFHQ-----------------LDAIDA 102 (211)
T ss_dssp TTCEEEESSCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHH-TSCCEECCGGG-----------------CCCCSC
T ss_pred CCCcEEEECCCCCHHHHHHHHcCC--eEEEECCCHHHHHHHHHhc-CCceEEeeecc-----------------CCCCCc
Confidence 456899999999999999988886 5789999999998888775 34455555432 223457
Q ss_pred ccEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhhcCCcEEEEecCcchhcc--------cchhHHHHHHHHHH
Q psy13720 296 VEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAF--------KNSMVLKMTMRCLT 367 (487)
Q Consensus 296 vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~~~P~~~ilENV~gl~~~--------~~~~~~~~i~~~l~ 367 (487)
+|+|+.......+. .+....++.++. +.++|.-.++=.++..... ........+.+.|.
T Consensus 103 fD~v~~~~~l~~~~----------~~~~~~~l~~~~---~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 169 (211)
T 3e23_A 103 YDAVWAHACLLHVP----------RDELADVLKLIW---RALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYA 169 (211)
T ss_dssp EEEEEECSCGGGSC----------HHHHHHHHHHHH---HHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHH
T ss_pred EEEEEecCchhhcC----------HHHHHHHHHHHH---HhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHH
Confidence 99998754321111 011223444433 4456754333222221110 01123567888889
Q ss_pred hCC-CeeEEEE-EeccCCCCCCcccEEEEEEE
Q psy13720 368 QIG-YQCTFGT-LQAGHFGVSQTRRRAIVLAA 397 (487)
Q Consensus 368 ~~G-Y~~~~~~-l~a~~yGvPQ~R~R~fiia~ 397 (487)
+.| +.+.... .....|+- ..+..++++..
T Consensus 170 ~aG~f~~~~~~~~~~~~~~~-~~~~wl~~~~~ 200 (211)
T 3e23_A 170 EAGTWASVAVESSEGKGFDQ-ELAQFLHVSVR 200 (211)
T ss_dssp HHCCCSEEEEEEEEEECTTS-CEEEEEEEEEE
T ss_pred hCCCcEEEEEEeccCCCCCC-CCceEEEEEEe
Confidence 999 9865443 44444431 22334444443
No 69
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=96.64 E-value=0.002 Score=64.44 Aligned_cols=68 Identities=19% Similarity=0.219 Sum_probs=51.7
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhC------CCCceeccchHHHHHHhhchhhhcccccc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN------PGCTVFVDDCNKILQRVIDNEVCDDKKQK 289 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~------p~~~~~~~di~~~~~~~~~~~~~~~~~~~ 289 (487)
..-++||+|||.|++++- .. |. ..++++|+++.|++..+.|. ....++++|+.++
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a~-~~-~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~---------------- 255 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-CK-NA-KKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREV---------------- 255 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-TT-TS-SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGC----------------
T ss_pred CCCEEEEccCccCHHHHh-cc-CC-CEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHh----------------
Confidence 445799999999999988 55 54 57899999999999888773 2344556665432
Q ss_pred CCCCCcccEEEccCCC
Q psy13720 290 LPRKGEVEMLCGGPPC 305 (487)
Q Consensus 290 ~p~~~~vd~i~ggpPC 305 (487)
. +.+|+|+..||.
T Consensus 256 -~--~~fD~Vi~dpP~ 268 (336)
T 2yx1_A 256 -D--VKGNRVIMNLPK 268 (336)
T ss_dssp -C--CCEEEEEECCTT
T ss_pred -c--CCCcEEEECCcH
Confidence 1 478999999884
No 70
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=96.62 E-value=0.018 Score=53.01 Aligned_cols=116 Identities=14% Similarity=0.013 Sum_probs=74.0
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhC-----C-CCceeccchHHHHHHhhchhhhcccccc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN-----P-GCTVFVDDCNKILQRVIDNEVCDDKKQK 289 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~-----p-~~~~~~~di~~~~~~~~~~~~~~~~~~~ 289 (487)
..-++||+.||.|.++.-+...|. .++++|+++.+++.-+.|. + +..++.+|+.+.
T Consensus 55 ~~~~vLDlGcG~G~~~~~la~~~~--~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~---------------- 116 (204)
T 3njr_A 55 RGELLWDIGGGSGSVSVEWCLAGG--RAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAA---------------- 116 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGG----------------
T ss_pred CCCEEEEecCCCCHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhh----------------
Confidence 456899999999999998887764 6899999999998877663 3 345566665431
Q ss_pred CCCCCcccEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhhcCCcEE-EEecCcchhcccchhHHHHHHHHHHh
Q psy13720 290 LPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFF-LLENVRNFVAFKNSMVLKMTMRCLTQ 368 (487)
Q Consensus 290 ~p~~~~vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~~~P~~~-ilENV~gl~~~~~~~~~~~i~~~l~~ 368 (487)
++..+.+|+|+.+.. . + .. ++.+. .+.++|.-. ++..+ . ...+..+++.|.+
T Consensus 117 ~~~~~~~D~v~~~~~---~------------~-~~-~l~~~---~~~LkpgG~lv~~~~-~------~~~~~~~~~~l~~ 169 (204)
T 3njr_A 117 LADLPLPEAVFIGGG---G------------S-QA-LYDRL---WEWLAPGTRIVANAV-T------LESETLLTQLHAR 169 (204)
T ss_dssp GTTSCCCSEEEECSC---C------------C-HH-HHHHH---HHHSCTTCEEEEEEC-S------HHHHHHHHHHHHH
T ss_pred cccCCCCCEEEECCc---c------------c-HH-HHHHH---HHhcCCCcEEEEEec-C------cccHHHHHHHHHh
Confidence 111235888885431 0 1 11 34443 344677543 33322 1 1346677888888
Q ss_pred CCCeeEEE
Q psy13720 369 IGYQCTFG 376 (487)
Q Consensus 369 ~GY~~~~~ 376 (487)
.||.+...
T Consensus 170 ~g~~i~~i 177 (204)
T 3njr_A 170 HGGQLLRI 177 (204)
T ss_dssp HCSEEEEE
T ss_pred CCCcEEEE
Confidence 99876544
No 71
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=96.62 E-value=0.014 Score=61.27 Aligned_cols=82 Identities=16% Similarity=0.209 Sum_probs=59.3
Q ss_pred CCCeEeecccCchHHHHHHhhc-CCCcEEEEEcCcHHHHHHHHHhC-----CCCceeccchHHHHHHhhchhhhcccccc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMNN-----PGCTVFVDDCNKILQRVIDNEVCDDKKQK 289 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~a-G~~~~~~a~e~~~~a~~t~~~N~-----p~~~~~~~di~~~~~~~~~~~~~~~~~~~ 289 (487)
..-+|||++||.||.+.-+... +-.-.++|+|+++.+++..+.|. +++.+.++|...+.. .
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~-------------~ 183 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGA-------------A 183 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHH-------------H
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhh-------------h
Confidence 4568999999999999887653 21136899999999999888774 344566667654311 0
Q ss_pred CCCCCcccEEEccCCCcCcccCC
Q psy13720 290 LPRKGEVEMLCGGPPCQGFSGMN 312 (487)
Q Consensus 290 ~p~~~~vd~i~ggpPCq~fS~~~ 312 (487)
. .+.+|+|+.-+||.+.....
T Consensus 184 ~--~~~fD~Il~D~PcSg~G~~~ 204 (479)
T 2frx_A 184 V--PEMFDAILLDAPCSGEGVVR 204 (479)
T ss_dssp S--TTCEEEEEEECCCCCGGGGG
T ss_pred c--cccCCEEEECCCcCCccccc
Confidence 1 24699999999998876543
No 72
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=96.60 E-value=0.005 Score=56.26 Aligned_cols=116 Identities=15% Similarity=0.155 Sum_probs=75.3
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCC-----CCceeccchHHHHHHhhchhhhccccccC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP-----GCTVFVDDCNKILQRVIDNEVCDDKKQKL 290 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p-----~~~~~~~di~~~~~~~~~~~~~~~~~~~~ 290 (487)
+..++||+.||.|.++.-+...|. ..+.++|+++.+++.-+.|.. +..+..+|+.+.
T Consensus 60 ~~~~vLDiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~----------------- 121 (205)
T 3grz_A 60 KPLTVADVGTGSGILAIAAHKLGA-KSVLATDISDESMTAAEENAALNGIYDIALQKTSLLAD----------------- 121 (205)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTT-----------------
T ss_pred CCCEEEEECCCCCHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHcCCCceEEEecccccc-----------------
Confidence 456899999999999999988886 578999999998887776632 244555554221
Q ss_pred CCCCcccEEEccCCCcCcccCCccCCcccccchhHHHHHHH-HHhhhcCCcEEEE--ecCcchhcccchhHHHHHHHHHH
Q psy13720 291 PRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYL-SYCDYYRPRFFLL--ENVRNFVAFKNSMVLKMTMRCLT 367 (487)
Q Consensus 291 p~~~~vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l-~~v~~~~P~~~il--ENV~gl~~~~~~~~~~~i~~~l~ 367 (487)
..+.+|+|+..++.+. +..++ .+.+.++|.-.++ +... .....+.+.|.
T Consensus 122 -~~~~fD~i~~~~~~~~-------------------~~~~l~~~~~~L~~gG~l~~~~~~~--------~~~~~~~~~~~ 173 (205)
T 3grz_A 122 -VDGKFDLIVANILAEI-------------------LLDLIPQLDSHLNEDGQVIFSGIDY--------LQLPKIEQALA 173 (205)
T ss_dssp -CCSCEEEEEEESCHHH-------------------HHHHGGGSGGGEEEEEEEEEEEEEG--------GGHHHHHHHHH
T ss_pred -CCCCceEEEECCcHHH-------------------HHHHHHHHHHhcCCCCEEEEEecCc--------ccHHHHHHHHH
Confidence 1257999998765311 12222 2334457754333 2221 13567778888
Q ss_pred hCCCeeEEEE
Q psy13720 368 QIGYQCTFGT 377 (487)
Q Consensus 368 ~~GY~~~~~~ 377 (487)
+.||.+....
T Consensus 174 ~~Gf~~~~~~ 183 (205)
T 3grz_A 174 ENSFQIDLKM 183 (205)
T ss_dssp HTTEEEEEEE
T ss_pred HcCCceEEee
Confidence 9999876543
No 73
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=96.56 E-value=0.0033 Score=61.36 Aligned_cols=76 Identities=17% Similarity=0.172 Sum_probs=55.6
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCC-----C-CceeccchHHHHHHhhchhhhcccccc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP-----G-CTVFVDDCNKILQRVIDNEVCDDKKQK 289 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p-----~-~~~~~~di~~~~~~~~~~~~~~~~~~~ 289 (487)
...++||++||.|.++..+...+. ..++++|+++.|++.-+.|.. + ..++.+|+.+.
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~~~-~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~---------------- 185 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKFSD-AIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP---------------- 185 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHHSS-CEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG----------------
T ss_pred CCCEEEEEeCchhHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhh----------------
Confidence 345799999999999998877622 368899999999998887742 1 34555565321
Q ss_pred CCCCCcc---cEEEccCCCcCccc
Q psy13720 290 LPRKGEV---EMLCGGPPCQGFSG 310 (487)
Q Consensus 290 ~p~~~~v---d~i~ggpPCq~fS~ 310 (487)
++ +.+ |+|+..|||-+.+.
T Consensus 186 ~~--~~f~~~D~IvsnPPyi~~~~ 207 (284)
T 1nv8_A 186 FK--EKFASIEMILSNPPYVKSSA 207 (284)
T ss_dssp GG--GGTTTCCEEEECCCCBCGGG
T ss_pred cc--cccCCCCEEEEcCCCCCccc
Confidence 11 245 99999999988765
No 74
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=96.55 E-value=0.0043 Score=64.21 Aligned_cols=70 Identities=16% Similarity=0.219 Sum_probs=51.9
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCC----CCceeccchHHHHHHhhchhhhccccccCC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP----GCTVFVDDCNKILQRVIDNEVCDDKKQKLP 291 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p----~~~~~~~di~~~~~~~~~~~~~~~~~~~~p 291 (487)
..-++||||||.|.+++-+...+. -+.++|+++.|++..+.|.. +...+.+|+.++ ++
T Consensus 290 ~~~~VLDlgcG~G~~sl~la~~~~--~V~gvD~s~~ai~~A~~n~~~ngl~v~~~~~d~~~~----------------~~ 351 (425)
T 2jjq_A 290 EGEKILDMYSGVGTFGIYLAKRGF--NVKGFDSNEFAIEMARRNVEINNVDAEFEVASDREV----------------SV 351 (425)
T ss_dssp CSSEEEEETCTTTHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHTCCEEEEECCTTTC----------------CC
T ss_pred CCCEEEEeeccchHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHHcCCcEEEEECChHHc----------------Cc
Confidence 456899999999999999987763 68999999999988877642 134455554321 12
Q ss_pred CCCcccEEEccCCC
Q psy13720 292 RKGEVEMLCGGPPC 305 (487)
Q Consensus 292 ~~~~vd~i~ggpPC 305 (487)
. .+|+|+.-||.
T Consensus 352 ~--~fD~Vv~dPPr 363 (425)
T 2jjq_A 352 K--GFDTVIVDPPR 363 (425)
T ss_dssp T--TCSEEEECCCT
T ss_pred c--CCCEEEEcCCc
Confidence 1 68999999995
No 75
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=96.52 E-value=0.011 Score=61.44 Aligned_cols=83 Identities=14% Similarity=0.191 Sum_probs=57.9
Q ss_pred CCCeEeecccCchHHHHHHhhc--CCCcEEEEEcCcHHHHHHHHHhC-----CCCceeccchHHHHHHhhchhhhccccc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKS--GVARSTWAIEFDSAAATAFKMNN-----PGCTVFVDDCNKILQRVIDNEVCDDKKQ 288 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~a--G~~~~~~a~e~~~~a~~t~~~N~-----p~~~~~~~di~~~~~~~~~~~~~~~~~~ 288 (487)
..-++||++||.||.+.-+... +- -.++|+|+++.+++..+.|. ++..+.++|..++ ..
T Consensus 259 ~g~~VLDlgaG~G~~t~~la~~~~~~-~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~-------------~~ 324 (450)
T 2yxl_A 259 PGETVVDLAAAPGGKTTHLAELMKNK-GKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKA-------------PE 324 (450)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHTTTC-SEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCC-------------SS
T ss_pred CcCEEEEeCCCccHHHHHHHHHcCCC-CEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhc-------------ch
Confidence 4568999999999999888653 31 36899999999998887773 2334445554321 00
Q ss_pred cCCCCCcccEEEccCCCcCcccCCc
Q psy13720 289 KLPRKGEVEMLCGGPPCQGFSGMNR 313 (487)
Q Consensus 289 ~~p~~~~vd~i~ggpPCq~fS~~~~ 313 (487)
.++ .+.+|+|+.-+||.+.....+
T Consensus 325 ~~~-~~~fD~Vl~D~Pcsg~g~~~~ 348 (450)
T 2yxl_A 325 IIG-EEVADKVLLDAPCTSSGTIGK 348 (450)
T ss_dssp SSC-SSCEEEEEEECCCCCGGGTTT
T ss_pred hhc-cCCCCEEEEcCCCCCCeeecc
Confidence 111 146999999999998876654
No 76
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=96.48 E-value=0.0097 Score=61.50 Aligned_cols=84 Identities=17% Similarity=0.143 Sum_probs=59.1
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCC----CCceeccchHHHHHHhhchhhhccccccCC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP----GCTVFVDDCNKILQRVIDNEVCDDKKQKLP 291 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p----~~~~~~~di~~~~~~~~~~~~~~~~~~~~p 291 (487)
+.-++||++||.||.+.-+...+-.-.++|+|+++.+++..+.|.. ...++++|...+.. .++
T Consensus 246 ~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~-------------~~~ 312 (429)
T 1sqg_A 246 NGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQ-------------WCG 312 (429)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHH-------------HHT
T ss_pred CcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchh-------------hcc
Confidence 4568999999999999988765421368999999998887777632 34455556543210 011
Q ss_pred CCCcccEEEccCCCcCcccCCc
Q psy13720 292 RKGEVEMLCGGPPCQGFSGMNR 313 (487)
Q Consensus 292 ~~~~vd~i~ggpPCq~fS~~~~ 313 (487)
.+.+|+|+.-+||.+.....+
T Consensus 313 -~~~fD~Vl~D~Pcsg~g~~~~ 333 (429)
T 1sqg_A 313 -EQQFDRILLDAPCSATGVIRR 333 (429)
T ss_dssp -TCCEEEEEEECCCCCGGGTTT
T ss_pred -cCCCCEEEEeCCCCcccccCC
Confidence 246999999999998876554
No 77
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=96.46 E-value=0.029 Score=52.26 Aligned_cols=149 Identities=8% Similarity=-0.018 Sum_probs=93.0
Q ss_pred CCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCCC------CceeccchHHHHHHhhchhhhccccccC
Q psy13720 217 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPG------CTVFVDDCNKILQRVIDNEVCDDKKQKL 290 (487)
Q Consensus 217 ~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p~------~~~~~~di~~~~~~~~~~~~~~~~~~~~ 290 (487)
+.++||+-||.|.++.-|...|. -+.++|+++.+++..+.+.+. ..+..+|+.+ +
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-----------------~ 127 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMASPER--FVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFT-----------------W 127 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCBTTE--EEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTT-----------------C
T ss_pred CCCEEEeCCCCCHHHHHHHhCCC--eEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhc-----------------C
Confidence 34899999999999999988775 588999999999988887654 2344444322 2
Q ss_pred CCCCcccEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhhcCCcE--EEEecCcchhc--ccchhHHHHHHHHH
Q psy13720 291 PRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRF--FLLENVRNFVA--FKNSMVLKMTMRCL 366 (487)
Q Consensus 291 p~~~~vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~~~P~~--~ilENV~gl~~--~~~~~~~~~i~~~l 366 (487)
+..+.+|+|+.......+.. +....++.++. +.++|.- ++++....-.. .........+.+.|
T Consensus 128 ~~~~~fD~v~~~~~l~~~~~----------~~~~~~l~~~~---~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l 194 (235)
T 3lcc_A 128 RPTELFDLIFDYVFFCAIEP----------EMRPAWAKSMY---ELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVL 194 (235)
T ss_dssp CCSSCEEEEEEESSTTTSCG----------GGHHHHHHHHH---HHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHH
T ss_pred CCCCCeeEEEEChhhhcCCH----------HHHHHHHHHHH---HHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHH
Confidence 23347999986543322211 11223444433 4456744 33332221100 00112346788888
Q ss_pred HhCCCeeEEEEEeccCCCCCCcccEEEEEEE
Q psy13720 367 TQIGYQCTFGTLQAGHFGVSQTRRRAIVLAA 397 (487)
Q Consensus 367 ~~~GY~~~~~~l~a~~yGvPQ~R~R~fiia~ 397 (487)
.+.|+.+.............+.++++...+.
T Consensus 195 ~~~Gf~~~~~~~~~~~~~~~~g~e~~~~~~~ 225 (235)
T 3lcc_A 195 VPIGFKAVSVEENPHAIPTRKGKEKLGRWKK 225 (235)
T ss_dssp GGGTEEEEEEEECTTCCTTTTTSCEEEEEEE
T ss_pred HHcCCeEEEEEecCCccccccCHHHHhhhhh
Confidence 9999998777776777777777888776654
No 78
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=96.45 E-value=0.0023 Score=58.46 Aligned_cols=84 Identities=15% Similarity=0.136 Sum_probs=47.0
Q ss_pred CCCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCCC----CceeccchHHHHHHhhchhhhccccccC
Q psy13720 215 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPG----CTVFVDDCNKILQRVIDNEVCDDKKQKL 290 (487)
Q Consensus 215 ~~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p~----~~~~~~di~~~~~~~~~~~~~~~~~~~~ 290 (487)
.+..++||+.||.|.++.-+...+-...+.++|+++.+++.-+.|... ..++.+|+.+.+.... .
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~----------~- 97 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIEWLIERA----------E- 97 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------CCHHHHHHHHHHHH----------H-
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHhhhhhhh----------h-
Confidence 356789999999999999988874223689999999999888877653 4455556554321100 0
Q ss_pred CCCCcccEEEccCCCcCccc
Q psy13720 291 PRKGEVEMLCGGPPCQGFSG 310 (487)
Q Consensus 291 p~~~~vd~i~ggpPCq~fS~ 310 (487)
..+.+|+|+..||+-..+.
T Consensus 98 -~~~~fD~i~~npp~~~~~~ 116 (215)
T 4dzr_A 98 -RGRPWHAIVSNPPYIPTGE 116 (215)
T ss_dssp -TTCCBSEEEECCCCCC---
T ss_pred -ccCcccEEEECCCCCCCcc
Confidence 1247999999999865543
No 79
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=96.40 E-value=0.016 Score=57.87 Aligned_cols=156 Identities=12% Similarity=0.117 Sum_probs=83.1
Q ss_pred CCCeEeecccCchHHHHHHhhcCC-----CcEEEEEcCcHHHHHHHHHhCC----CCceeccchHHHHHHhhchhhhccc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGV-----ARSTWAIEFDSAAATAFKMNNP----GCTVFVDDCNKILQRVIDNEVCDDK 286 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~-----~~~~~a~e~~~~a~~t~~~N~p----~~~~~~~di~~~~~~~~~~~~~~~~ 286 (487)
...+++|++||.|++...+....- ...++++|+++.+++.-+.|.. ...++++|.. .
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l------------~-- 195 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGL------------A-- 195 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCTT------------S--
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEECCCC------------C--
Confidence 457899999999999888755431 1368999999999988877631 2334444421 1
Q ss_pred cccCCCCCcccEEEccCCCcCcccC---CccCCc---ccccchhHHHHHHHHHhhhcCCc-EEEEecCcchhcccchhHH
Q psy13720 287 KQKLPRKGEVEMLCGGPPCQGFSGM---NRFNQR---QYSAFKNSLIVSYLSYCDYYRPR-FFLLENVRNFVAFKNSMVL 359 (487)
Q Consensus 287 ~~~~p~~~~vd~i~ggpPCq~fS~~---~~~~~~---~~~d~r~~L~~~~l~~v~~~~P~-~~ilENV~gl~~~~~~~~~ 359 (487)
.. ..+.+|+|++-||...++.. .++... +..+....++. .+++.++|. .+++..-.++++... .
T Consensus 196 --~~-~~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~---~~~~~Lk~gG~~~~v~p~~~~~~~~---~ 266 (344)
T 2f8l_A 196 --NL-LVDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIE---QGMRYTKPGGYLFFLVPDAMFGTSD---F 266 (344)
T ss_dssp --CC-CCCCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHH---HHHHTEEEEEEEEEEEEGGGGGSTT---H
T ss_pred --cc-ccCCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHH---HHHHHhCCCCEEEEEECchhcCCch---H
Confidence 11 13479999999997332211 011000 11111112233 344556675 233333334554332 3
Q ss_pred HHHHHHHHhCCCeeEEEEEeccCCCCCCcccEEEE
Q psy13720 360 KMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIV 394 (487)
Q Consensus 360 ~~i~~~l~~~GY~~~~~~l~a~~yGvPQ~R~R~fi 394 (487)
..+.+.|.+.|+.....-+-..-|+-.....-+++
T Consensus 267 ~~ir~~l~~~~~~~~ii~lp~~~F~~~~~~~~i~v 301 (344)
T 2f8l_A 267 AKVDKFIKKNGHIEGIIKLPETLFKSEQARKSILI 301 (344)
T ss_dssp HHHHHHHHHHEEEEEEEECCGGGSCC-CCCEEEEE
T ss_pred HHHHHHHHhCCeEEEeeeCChhhccCCCCceEEEE
Confidence 55666666767644333344444554333333333
No 80
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=96.38 E-value=0.0047 Score=59.31 Aligned_cols=84 Identities=17% Similarity=0.111 Sum_probs=56.9
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCCC---------CceeccchHHHHHHhhchhhhccc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPG---------CTVFVDDCNKILQRVIDNEVCDDK 286 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p~---------~~~~~~di~~~~~~~~~~~~~~~~ 286 (487)
...++|||+||.|.+++-+...+-...+.++|+++.+++.-+.|... ..++++|+.+++....
T Consensus 36 ~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~-------- 107 (260)
T 2ozv_A 36 RACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARV-------- 107 (260)
T ss_dssp SCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHH--------
T ss_pred CCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhh--------
Confidence 45689999999999999887764224689999999999999988654 3456666654321100
Q ss_pred cccCCCCCcccEEEccCCCcCc
Q psy13720 287 KQKLPRKGEVEMLCGGPPCQGF 308 (487)
Q Consensus 287 ~~~~p~~~~vd~i~ggpPCq~f 308 (487)
...++ .+.+|+|+..||.-..
T Consensus 108 ~~~~~-~~~fD~Vv~nPPy~~~ 128 (260)
T 2ozv_A 108 EAGLP-DEHFHHVIMNPPYNDA 128 (260)
T ss_dssp HTTCC-TTCEEEEEECCCC---
T ss_pred hhccC-CCCcCEEEECCCCcCC
Confidence 01122 3479999999998654
No 81
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=96.37 E-value=0.005 Score=59.41 Aligned_cols=77 Identities=18% Similarity=0.245 Sum_probs=56.0
Q ss_pred CCCeEeecccCchHHHHHHhhc-CCCcEEEEEcCcHHHHHHHHHhC-----CCCceeccchHHHHHHhhchhhhcccccc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMNN-----PGCTVFVDDCNKILQRVIDNEVCDDKKQK 289 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~a-G~~~~~~a~e~~~~a~~t~~~N~-----p~~~~~~~di~~~~~~~~~~~~~~~~~~~ 289 (487)
...++||+.||.|.++.-+... +. ..++++|+++.+++.-+.|. ++..++.+|+.+.
T Consensus 109 ~~~~vLDlG~GsG~~~~~la~~~~~-~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~---------------- 171 (276)
T 2b3t_A 109 QPCRILDLGTGTGAIALALASERPD-CEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSA---------------- 171 (276)
T ss_dssp SCCEEEEETCTTSHHHHHHHHHCTT-SEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGG----------------
T ss_pred CCCEEEEecCCccHHHHHHHHhCCC-CEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhh----------------
Confidence 4568999999999999888743 22 36899999999999888774 2344555554321
Q ss_pred CCCCCcccEEEccCCCcCccc
Q psy13720 290 LPRKGEVEMLCGGPPCQGFSG 310 (487)
Q Consensus 290 ~p~~~~vd~i~ggpPCq~fS~ 310 (487)
++ .+.+|+|+..|||.+.+.
T Consensus 172 ~~-~~~fD~Iv~npPy~~~~~ 191 (276)
T 2b3t_A 172 LA-GQQFAMIVSNPPYIDEQD 191 (276)
T ss_dssp GT-TCCEEEEEECCCCBCTTC
T ss_pred cc-cCCccEEEECCCCCCccc
Confidence 11 347999999999987653
No 82
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=96.33 E-value=0.02 Score=58.48 Aligned_cols=154 Identities=14% Similarity=0.136 Sum_probs=85.0
Q ss_pred CCeEeecccCchHHHHHHhhc--CCCcEEEEEcCcHHHHHHHHHhCCCCceeccchHHHHHHhhchhhhccccccCCCCC
Q psy13720 217 PLRCLEVFAGAGGLSRGLDKS--GVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKG 294 (487)
Q Consensus 217 ~l~~ldLFsG~Gg~s~Gl~~a--G~~~~~~a~e~~~~a~~t~~~N~p~~~~~~~di~~~~~~~~~~~~~~~~~~~~p~~~ 294 (487)
..++||+.||.|++...+.+. +. ..+.++|+++.|++.- ++..++++|+.+. +..+
T Consensus 40 ~~~vLD~gcGtG~~~~~~~~~~~~~-~~i~gvDi~~~~~~~a----~~~~~~~~D~~~~-----------------~~~~ 97 (421)
T 2ih2_A 40 GGRVLEPACAHGPFLRAFREAHGTA-YRFVGVEIDPKALDLP----PWAEGILADFLLW-----------------EPGE 97 (421)
T ss_dssp TCEEEEETCTTCHHHHHHHHHHCSC-SEEEEEESCTTTCCCC----TTEEEEESCGGGC-----------------CCSS
T ss_pred CCEEEECCCCChHHHHHHHHHhCCC-CeEEEEECCHHHHHhC----CCCcEEeCChhhc-----------------CccC
Confidence 448999999999999988763 22 4789999999887543 3445566665321 1234
Q ss_pred cccEEEccCCCcCcccCCccC----Ccc---------cccchhHHHHHHHH-HhhhcCCcEEE-EecCcchhcccchhHH
Q psy13720 295 EVEMLCGGPPCQGFSGMNRFN----QRQ---------YSAFKNSLIVSYLS-YCDYYRPRFFL-LENVRNFVAFKNSMVL 359 (487)
Q Consensus 295 ~vd~i~ggpPCq~fS~~~~~~----~~~---------~~d~r~~L~~~~l~-~v~~~~P~~~i-lENV~gl~~~~~~~~~ 359 (487)
.+|+|++-||.-..+..++.. ... ..+.+..++..++. +.+.++|.-.+ +.--.+++... ..
T Consensus 98 ~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~~l~~~---~~ 174 (421)
T 2ih2_A 98 AFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVLE---DF 174 (421)
T ss_dssp CEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGGGGTCG---GG
T ss_pred CCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChHHhcCc---cH
Confidence 799999999997765422100 000 00001123333333 34455665322 22222333222 23
Q ss_pred HHHHHHHHhCCCeeEEEEEeccCC-CCCCcccEEEEEEEcC
Q psy13720 360 KMTMRCLTQIGYQCTFGTLQAGHF-GVSQTRRRAIVLAAAP 399 (487)
Q Consensus 360 ~~i~~~l~~~GY~~~~~~l~a~~y-GvPQ~R~R~fiia~~~ 399 (487)
..+.+.|.+.|+ .....+. .-| |+++ .+++++..+.
T Consensus 175 ~~lr~~l~~~~~-~~i~~l~-~~F~~~~~--~~~il~~~k~ 211 (421)
T 2ih2_A 175 ALLREFLAREGK-TSVYYLG-EVFPQKKV--SAVVIRFQKS 211 (421)
T ss_dssp HHHHHHHHHHSE-EEEEEEE-SCSTTCCC--CEEEEEEESS
T ss_pred HHHHHHHHhcCC-eEEEECC-CCCCCCCc--cEEEEEEEeC
Confidence 556666777777 4444455 334 3333 4566666553
No 83
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=96.27 E-value=0.068 Score=49.33 Aligned_cols=132 Identities=13% Similarity=0.137 Sum_probs=78.0
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHh-----CCCCceeccchHHHHHHhhchhhhccccccC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMN-----NPGCTVFVDDCNKILQRVIDNEVCDDKKQKL 290 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N-----~p~~~~~~~di~~~~~~~~~~~~~~~~~~~~ 290 (487)
..-++||+.||.|.++..+....-..-+.++|+++.+++.-+.| .++..++.+|+.++.. .+
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~-------------~~ 104 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTD-------------VF 104 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHH-------------HC
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHh-------------hc
Confidence 34579999999999999987652113688999999998877665 2455667778765421 12
Q ss_pred CCCCcccEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhhcCCcE-EEEecCcchhcccchhHHHHHHHHHHhC
Q psy13720 291 PRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRF-FLLENVRNFVAFKNSMVLKMTMRCLTQI 369 (487)
Q Consensus 291 p~~~~vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~~~P~~-~ilENV~gl~~~~~~~~~~~i~~~l~~~ 369 (487)
+ .+.+|.|+..+|+.-...... .+.. ....++.++. ..++|.- ++++ ......+..++..|.+.
T Consensus 105 ~-~~~~d~v~~~~~~p~~~~~~~--~~rl--~~~~~l~~~~---~~LkpgG~l~~~-------td~~~~~~~~~~~~~~~ 169 (213)
T 2fca_A 105 E-PGEVKRVYLNFSDPWPKKRHE--KRRL--TYSHFLKKYE---EVMGKGGSIHFK-------TDNRGLFEYSLKSFSEY 169 (213)
T ss_dssp C-TTSCCEEEEESCCCCCSGGGG--GGST--TSHHHHHHHH---HHHTTSCEEEEE-------ESCHHHHHHHHHHHHHH
T ss_pred C-cCCcCEEEEECCCCCcCcccc--cccc--CcHHHHHHHH---HHcCCCCEEEEE-------eCCHHHHHHHHHHHHHC
Confidence 2 246888887766532221110 0100 1123344333 3457763 3333 12223456778888888
Q ss_pred CCeeEE
Q psy13720 370 GYQCTF 375 (487)
Q Consensus 370 GY~~~~ 375 (487)
||....
T Consensus 170 g~~~~~ 175 (213)
T 2fca_A 170 GLLLTY 175 (213)
T ss_dssp TCEEEE
T ss_pred CCcccc
Confidence 987654
No 84
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=96.23 E-value=0.034 Score=51.60 Aligned_cols=147 Identities=14% Similarity=0.140 Sum_probs=90.2
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCCC---CceeccchHHHHHHhhchhhhccccccCCC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPG---CTVFVDDCNKILQRVIDNEVCDDKKQKLPR 292 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p~---~~~~~~di~~~~~~~~~~~~~~~~~~~~p~ 292 (487)
+..++||+-||.|.++.-+....-...+.++|+++.+++..+.+.+. .....+|+.+ ++.
T Consensus 44 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~-----------------~~~ 106 (234)
T 3dtn_A 44 ENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSK-----------------YDF 106 (234)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTT-----------------CCC
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhc-----------------cCC
Confidence 56789999999999999998873113688999999999988888753 3344455432 222
Q ss_pred CCcccEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhhcCCc--EEEEecCcchhcc-----------------
Q psy13720 293 KGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPR--FFLLENVRNFVAF----------------- 353 (487)
Q Consensus 293 ~~~vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~~~P~--~~ilENV~gl~~~----------------- 353 (487)
.+.+|+|+.......++ ...+..++.++. +.++|. +++.+.+.+-...
T Consensus 107 ~~~fD~v~~~~~l~~~~----------~~~~~~~l~~~~---~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (234)
T 3dtn_A 107 EEKYDMVVSALSIHHLE----------DEDKKELYKRSY---SILKESGIFINADLVHGETAFIENLNKTIWRQYVENSG 173 (234)
T ss_dssp CSCEEEEEEESCGGGSC----------HHHHHHHHHHHH---HHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHHHTSS
T ss_pred CCCceEEEEeCccccCC----------HHHHHHHHHHHH---HhcCCCcEEEEEEecCCCChhhhhHHHHHHHHHHHhcC
Confidence 36899998765432221 111223444443 445664 4455544321000
Q ss_pred ---------------cchhHHHHHHHHHHhCCCeeEEEEEeccCCCCCCcccEEEEEEEcCC
Q psy13720 354 ---------------KNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPG 400 (487)
Q Consensus 354 ---------------~~~~~~~~i~~~l~~~GY~~~~~~l~a~~yGvPQ~R~R~fiia~~~~ 400 (487)
........+.+.|++.|+..-........|| .++|.+++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v~~~~~~~~~~--------~~~~~~~~ 227 (234)
T 3dtn_A 174 LTEEEIAAGYERSKLDKDIEMNQQLNWLKEAGFRDVSCIYKYYQFA--------VMFGRKTE 227 (234)
T ss_dssp CCHHHHHTTC----CCCCCBHHHHHHHHHHTTCEEEEEEEEETTEE--------EEEEECC-
T ss_pred CCHHHHHHHHHhcccccccCHHHHHHHHHHcCCCceeeeeeeccee--------EEEEEecc
Confidence 0001235667789999999888888777775 45566554
No 85
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=96.18 E-value=0.18 Score=49.84 Aligned_cols=151 Identities=15% Similarity=0.204 Sum_probs=90.6
Q ss_pred CCCeEeecccCchHHHHHHhhc-CCCcEEEEEcCcHHHHHHHHHhCCC---------CceeccchHHHHHHhhchhhhcc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMNNPG---------CTVFVDDCNKILQRVIDNEVCDD 285 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~a-G~~~~~~a~e~~~~a~~t~~~N~p~---------~~~~~~di~~~~~~~~~~~~~~~ 285 (487)
.+.++||+.||.|+++..+... +. ..+.++|+|+.+++.-+.|++. ..++.+|..+.+..
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~-~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~--------- 185 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSV-ENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLEN--------- 185 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTC-CEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHH---------
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCC-CEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhh---------
Confidence 3468999999999999988765 43 5789999999999999888753 34566777654311
Q ss_pred ccccCCCCCcccEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhhcCCcEEE-EecCcchhcccchhHHHHHHH
Q psy13720 286 KKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFL-LENVRNFVAFKNSMVLKMTMR 364 (487)
Q Consensus 286 ~~~~~p~~~~vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~~~P~~~i-lENV~gl~~~~~~~~~~~i~~ 364 (487)
..+.+|+|+..++.. + +. . .......++.. +.+.++|.-++ ++...... ....+..+++
T Consensus 186 ------~~~~fDvIi~d~~~p-~---~~---~-~~l~~~~~l~~---~~~~LkpgG~lv~~~~~~~~---~~~~~~~~~~ 245 (321)
T 2pt6_A 186 ------VTNTYDVIIVDSSDP-I---GP---A-ETLFNQNFYEK---IYNALKPNGYCVAQCESLWI---HVGTIKNMIG 245 (321)
T ss_dssp ------CCSCEEEEEEECCCS-S---SG---G-GGGSSHHHHHH---HHHHEEEEEEEEEEECCTTT---CHHHHHHHHH
T ss_pred ------cCCCceEEEECCcCC-C---Cc---c-hhhhHHHHHHH---HHHhcCCCcEEEEEcCCccc---CHHHHHHHHH
Confidence 123689999876532 1 11 0 00011222332 33556787544 44333322 2345777888
Q ss_pred HHHhCCCeeEEEEEeccCCCCCCcccEEEEEEEcC
Q psy13720 365 CLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAP 399 (487)
Q Consensus 365 ~l~~~GY~~~~~~l~a~~yGvPQ~R~R~fiia~~~ 399 (487)
.|.+..-.+......--.|. .-.-.|++|++.
T Consensus 246 ~l~~~F~~v~~~~~~vp~~~---~g~w~f~~as~~ 277 (321)
T 2pt6_A 246 YAKKLFKKVEYANISIPTYP---CGCIGILCCSKT 277 (321)
T ss_dssp HHHTTCSEEEEEEEECTTSG---GGEEEEEEEESS
T ss_pred HHHHHCCCeEEEEEEecccc---CceEEEEEeeCC
Confidence 88877555544433322231 124568888754
No 86
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=96.17 E-value=0.082 Score=49.53 Aligned_cols=149 Identities=13% Similarity=0.071 Sum_probs=86.5
Q ss_pred CCCeEeecccCchHHHHHHhh--cCCCcEEEEEcCcHHHHHHHHHhC-----CCCceeccchHHHHHHhhchhhhccccc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDK--SGVARSTWAIEFDSAAATAFKMNN-----PGCTVFVDDCNKILQRVIDNEVCDDKKQ 288 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~--aG~~~~~~a~e~~~~a~~t~~~N~-----p~~~~~~~di~~~~~~~~~~~~~~~~~~ 288 (487)
..-++||+.||.|.++.-+.. .+. .+.++|+++.+++..+.|. ++..++++|+.++..
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~------------- 134 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFPHL--HVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQ------------- 134 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCTTC--EEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTT-------------
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCC--EEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcc-------------
Confidence 456899999999988888764 343 5889999998887776642 345677778765410
Q ss_pred cCCCCCcccEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhhcCCcEE-EEecCcchhcccchhHHHHHHHHHH
Q psy13720 289 KLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFF-LLENVRNFVAFKNSMVLKMTMRCLT 367 (487)
Q Consensus 289 ~~p~~~~vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~~~P~~~-ilENV~gl~~~~~~~~~~~i~~~l~ 367 (487)
.....+.+|+|+... + .+ ...++.. +...++|.-. ++. .|. .....+..+.+.+.
T Consensus 135 ~~~~~~~fD~V~~~~----~-----------~~-~~~~l~~---~~~~LkpgG~l~~~--~g~---~~~~~~~~~~~~l~ 190 (240)
T 1xdz_A 135 RKDVRESYDIVTARA----V-----------AR-LSVLSEL---CLPLVKKNGLFVAL--KAA---SAEEELNAGKKAIT 190 (240)
T ss_dssp CTTTTTCEEEEEEEC----C-----------SC-HHHHHHH---HGGGEEEEEEEEEE--ECC----CHHHHHHHHHHHH
T ss_pred cccccCCccEEEEec----c-----------CC-HHHHHHH---HHHhcCCCCEEEEE--eCC---CchHHHHHHHHHHH
Confidence 000124789998522 1 11 1222222 2355677543 332 111 11234566778888
Q ss_pred hCCCeeEEEEEeccCCCCCC-cccEEEEEEEcCCCCCCCCC
Q psy13720 368 QIGYQCTFGTLQAGHFGVSQ-TRRRAIVLAAAPGEVLPKYP 407 (487)
Q Consensus 368 ~~GY~~~~~~l~a~~yGvPQ-~R~R~fiia~~~~~~~p~~P 407 (487)
..|+.+.... .|.+|. .-.|.+++..+.......+|
T Consensus 191 ~~g~~~~~~~----~~~~~~~~~~~~l~~~~k~~~~~~~~p 227 (240)
T 1xdz_A 191 TLGGELENIH----SFKLPIEESDRNIMVIRKIKNTPKKYP 227 (240)
T ss_dssp HTTEEEEEEE----EEECTTTCCEEEEEEEEECSCCCTTCS
T ss_pred HcCCeEeEEE----EEecCCCCCceEEEEEEecCCCCCCCC
Confidence 9999764332 122443 24577777776654444455
No 87
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=96.11 E-value=0.073 Score=49.69 Aligned_cols=132 Identities=11% Similarity=0.041 Sum_probs=78.5
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCCCC-----ceeccchHHHHHHhhchhhhccccccC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGC-----TVFVDDCNKILQRVIDNEVCDDKKQKL 290 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p~~-----~~~~~di~~~~~~~~~~~~~~~~~~~~ 290 (487)
+..++||+-||.|.++.-+...+. ..+.++|+++.+++..+.+.... ..+..|+.++ .+
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~---------------~~ 142 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLF-REVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDF---------------TP 142 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTC-SEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGC---------------CC
T ss_pred CCCEEEEECCCCCHHHHHHHHhcC-CEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhc---------------CC
Confidence 467899999999999999887775 57899999999999888887542 2334443221 11
Q ss_pred CCCCcccEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhhcCCc--EEEEecCcch---hcccc---hhHHHHH
Q psy13720 291 PRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPR--FFLLENVRNF---VAFKN---SMVLKMT 362 (487)
Q Consensus 291 p~~~~vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~~~P~--~~ilENV~gl---~~~~~---~~~~~~i 362 (487)
..+.+|+|+....- ... .+.....++.++ .+.++|. +++.+++..- ..... ......+
T Consensus 143 -~~~~fD~v~~~~~l------~~~----~~~~~~~~l~~~---~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (241)
T 2ex4_A 143 -EPDSYDVIWIQWVI------GHL----TDQHLAEFLRRC---KGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVV 208 (241)
T ss_dssp -CSSCEEEEEEESCG------GGS----CHHHHHHHHHHH---HHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHH
T ss_pred -CCCCEEEEEEcchh------hhC----CHHHHHHHHHHH---HHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHH
Confidence 23468999855211 110 001112333333 3445664 4555665431 00000 1135678
Q ss_pred HHHHHhCCCeeEEEE
Q psy13720 363 MRCLTQIGYQCTFGT 377 (487)
Q Consensus 363 ~~~l~~~GY~~~~~~ 377 (487)
.+.|.+.|+.+....
T Consensus 209 ~~~l~~aGf~~~~~~ 223 (241)
T 2ex4_A 209 RRIICSAGLSLLAEE 223 (241)
T ss_dssp HHHHHHTTCCEEEEE
T ss_pred HHHHHHcCCeEEEee
Confidence 888899999865543
No 88
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=96.06 E-value=0.15 Score=47.25 Aligned_cols=68 Identities=12% Similarity=0.075 Sum_probs=48.5
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhC----CCCceeccchHHHHHHhhchhhhccccccCC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN----PGCTVFVDDCNKILQRVIDNEVCDDKKQKLP 291 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~----p~~~~~~~di~~~~~~~~~~~~~~~~~~~~p 291 (487)
...++||+.||.|.++.-+... . .+.++|+++.+++.-+.+. +.......|+.+ ++
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~-~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~-----------------~~ 92 (243)
T 3d2l_A 33 PGKRIADIGCGTGTATLLLADH-Y--EVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRE-----------------LE 92 (243)
T ss_dssp TTCEEEEESCTTCHHHHHHTTT-S--EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGG-----------------CC
T ss_pred CCCeEEEecCCCCHHHHHHhhC-C--eEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhh-----------------cC
Confidence 3468999999999999988776 3 6889999999888776653 344555555432 12
Q ss_pred CCCcccEEEccC
Q psy13720 292 RKGEVEMLCGGP 303 (487)
Q Consensus 292 ~~~~vd~i~ggp 303 (487)
..+.+|+|+...
T Consensus 93 ~~~~fD~v~~~~ 104 (243)
T 3d2l_A 93 LPEPVDAITILC 104 (243)
T ss_dssp CSSCEEEEEECT
T ss_pred CCCCcCEEEEeC
Confidence 235789998643
No 89
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=96.02 E-value=0.0057 Score=61.38 Aligned_cols=74 Identities=16% Similarity=0.205 Sum_probs=53.5
Q ss_pred CCCeEeecccCchHHHHHHhhcC-CCcEEEEEcCcHHHHHHHHHhCC-----CCceeccchHHHHHHhhchhhhcccccc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSG-VARSTWAIEFDSAAATAFKMNNP-----GCTVFVDDCNKILQRVIDNEVCDDKKQK 289 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG-~~~~~~a~e~~~~a~~t~~~N~p-----~~~~~~~di~~~~~~~~~~~~~~~~~~~ 289 (487)
..-++||+|||.|++..-+...+ -...++++|+++.+++.-+.|.. ...+.++|+.++.
T Consensus 203 ~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~--------------- 267 (354)
T 3tma_A 203 PGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLP--------------- 267 (354)
T ss_dssp TTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGG---------------
T ss_pred CCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCc---------------
Confidence 45679999999999988776643 11357899999999998888743 3455666665431
Q ss_pred CCCCCcccEEEccCCC
Q psy13720 290 LPRKGEVEMLCGGPPC 305 (487)
Q Consensus 290 ~p~~~~vd~i~ggpPC 305 (487)
+..+.+|+|+.-||+
T Consensus 268 -~~~~~~D~Ii~npPy 282 (354)
T 3tma_A 268 -RFFPEVDRILANPPH 282 (354)
T ss_dssp -GTCCCCSEEEECCCS
T ss_pred -cccCCCCEEEECCCC
Confidence 012357999999998
No 90
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=96.02 E-value=0.0057 Score=62.81 Aligned_cols=75 Identities=16% Similarity=0.181 Sum_probs=55.9
Q ss_pred CCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCC-------CCceeccchHHHHHHhhchhhhcccccc
Q psy13720 217 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP-------GCTVFVDDCNKILQRVIDNEVCDDKKQK 289 (487)
Q Consensus 217 ~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p-------~~~~~~~di~~~~~~~~~~~~~~~~~~~ 289 (487)
.-+++||+||.|+.+..|...|. .+.++|+++.+++.-+.|.. +..++++|+.+++...
T Consensus 94 g~~VLDLgcG~G~~al~LA~~g~--~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~------------ 159 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSKAS--QGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLI------------ 159 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHH------------
T ss_pred CCEEEEeCCCchHHHHHHHhcCC--EEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhc------------
Confidence 56899999999999999988774 68999999999998888742 2456777776543210
Q ss_pred CCCCCcccEEEccCCCcC
Q psy13720 290 LPRKGEVEMLCGGPPCQG 307 (487)
Q Consensus 290 ~p~~~~vd~i~ggpPCq~ 307 (487)
..+.+|+|+.-||=.+
T Consensus 160 --~~~~fDvV~lDPPrr~ 175 (410)
T 3ll7_A 160 --KTFHPDYIYVDPARRS 175 (410)
T ss_dssp --HHHCCSEEEECCEEC-
T ss_pred --cCCCceEEEECCCCcC
Confidence 0125899999999544
No 91
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=96.01 E-value=0.1 Score=48.58 Aligned_cols=147 Identities=12% Similarity=0.080 Sum_probs=81.6
Q ss_pred CCCeEeecccCchHHHHHHhhc-CCCcEEEEEcCcHHHHHHHHHhCC---CCceeccchHHHHHHhhchhhhccccccCC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMNNP---GCTVFVDDCNKILQRVIDNEVCDDKKQKLP 291 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~a-G~~~~~~a~e~~~~a~~t~~~N~p---~~~~~~~di~~~~~~~~~~~~~~~~~~~~p 291 (487)
...++||+.||.|.++.-+... |- ..++++|+++.+++..+.|.. +...+.+|+... . ..++
T Consensus 74 ~~~~VLDlGcG~G~~~~~la~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~------------~-~~~~ 139 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVADIADK-GIVYAIEYAPRIMRELLDACAERENIIPILGDANKP------------Q-EYAN 139 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHHHHTTT-SEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCG------------G-GGTT
T ss_pred CCCEEEEEcccCCHHHHHHHHHcCC-cEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCc------------c-cccc
Confidence 5568999999999999888765 52 578999999999988777643 333445554321 0 0012
Q ss_pred CCCcccEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhhcCCcE-EEEecCcc--hhcc-cchhHHHHHHHHHH
Q psy13720 292 RKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRF-FLLENVRN--FVAF-KNSMVLKMTMRCLT 367 (487)
Q Consensus 292 ~~~~vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~~~P~~-~ilENV~g--l~~~-~~~~~~~~i~~~l~ 367 (487)
..+.+|+|+..+| . . +....++.+ +...++|.- +++. +.. .-.. ....++..-+..|.
T Consensus 140 ~~~~~D~v~~~~~-------~----~---~~~~~~l~~---~~~~LkpgG~l~i~-~~~~~~~~~~~~~~~~~~~l~~l~ 201 (230)
T 1fbn_A 140 IVEKVDVIYEDVA-------Q----P---NQAEILIKN---AKWFLKKGGYGMIA-IKARSIDVTKDPKEIFKEQKEILE 201 (230)
T ss_dssp TSCCEEEEEECCC-------S----T---THHHHHHHH---HHHHEEEEEEEEEE-EEGGGTCSSSCHHHHHHHHHHHHH
T ss_pred cCccEEEEEEecC-------C----h---hHHHHHHHH---HHHhCCCCcEEEEE-EecCCCCCCCCHHHhhHHHHHHHH
Confidence 2257899982211 0 0 001122333 334567753 3332 211 0000 01123333344778
Q ss_pred hCCCeeEEEEEeccCCCCCCcccEEEEEEEcC
Q psy13720 368 QIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAP 399 (487)
Q Consensus 368 ~~GY~~~~~~l~a~~yGvPQ~R~R~fiia~~~ 399 (487)
+.||.+.... + . -|..+...+++|.++
T Consensus 202 ~~Gf~~~~~~-~---~-~~~~~~~~~v~~~k~ 228 (230)
T 1fbn_A 202 AGGFKIVDEV-D---I-EPFEKDHVMFVGIWE 228 (230)
T ss_dssp HHTEEEEEEE-E---C-TTTSTTEEEEEEEEC
T ss_pred HCCCEEEEEE-c---c-CCCccceEEEEEEeC
Confidence 8899764433 2 2 345678889998764
No 92
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=96.01 E-value=0.13 Score=50.36 Aligned_cols=153 Identities=12% Similarity=0.201 Sum_probs=91.1
Q ss_pred CCCeEeecccCchHHHHHHhhc-CCCcEEEEEcCcHHHHHHHHHhC---------CCCceeccchHHHHHHhhchhhhcc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMNN---------PGCTVFVDDCNKILQRVIDNEVCDD 285 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~a-G~~~~~~a~e~~~~a~~t~~~N~---------p~~~~~~~di~~~~~~~~~~~~~~~ 285 (487)
...+|||+-||.|+++.-+... +. ..+.++|+|+.+++.-+.++ +...++.+|+.+++..
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~-~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~--------- 164 (304)
T 3bwc_A 95 KPERVLIIGGGDGGVLREVLRHGTV-EHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQ--------- 164 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHHTCTTC-CEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHS---------
T ss_pred CCCeEEEEcCCCCHHHHHHHhCCCC-CEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHh---------
Confidence 4468999999999999988765 33 57899999999999888776 3456777887765311
Q ss_pred ccccCCCCCcccEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhhcCCcEEEEecCcchhcccchhHHHHHHHH
Q psy13720 286 KKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRC 365 (487)
Q Consensus 286 ~~~~~p~~~~vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~~~P~~~ilENV~gl~~~~~~~~~~~i~~~ 365 (487)
. ..+.+|+|+..++-.. .... ......++. .+.+.++|.-+++=+.... +........+.+.
T Consensus 165 ----~-~~~~fDvIi~d~~~~~-~~~~-------~l~~~~~l~---~~~~~LkpgG~lv~~~~~~--~~~~~~~~~~~~~ 226 (304)
T 3bwc_A 165 ----T-PDNTYDVVIIDTTDPA-GPAS-------KLFGEAFYK---DVLRILKPDGICCNQGESI--WLDLELIEKMSRF 226 (304)
T ss_dssp ----S-CTTCEEEEEEECC-----------------CCHHHHH---HHHHHEEEEEEEEEEECCT--TTCHHHHHHHHHH
T ss_pred ----c-cCCceeEEEECCCCcc-ccch-------hhhHHHHHH---HHHHhcCCCcEEEEecCCc--ccchHHHHHHHHH
Confidence 0 1246899998655321 1100 000112333 2345568876555443321 1123456788889
Q ss_pred HHhCCCee-EEEEEeccCCCCCCcccEEEEEEEcC
Q psy13720 366 LTQIGYQC-TFGTLQAGHFGVSQTRRRAIVLAAAP 399 (487)
Q Consensus 366 l~~~GY~~-~~~~l~a~~yGvPQ~R~R~fiia~~~ 399 (487)
|.+.|+.. .......-.| ..-...|++|++.
T Consensus 227 l~~~GF~~v~~~~~~vP~y---p~g~w~f~~as~~ 258 (304)
T 3bwc_A 227 IRETGFASVQYALMHVPTY---PCGSIGTLVCSKK 258 (304)
T ss_dssp HHHHTCSEEEEEECCCTTS---TTSCCEEEEEESS
T ss_pred HHhCCCCcEEEEEeecccc---cCcceEEEEEeCC
Confidence 99999863 3332322223 0234668888864
No 93
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=95.99 E-value=0.14 Score=47.35 Aligned_cols=76 Identities=12% Similarity=0.071 Sum_probs=50.2
Q ss_pred CCCeEeecccCchHHHHHHhhc-CCCcEEEEEcCcHHHHHHHHHhC---CCCceeccchHHHHHHhhchhhhccccccCC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMNN---PGCTVFVDDCNKILQRVIDNEVCDDKKQKLP 291 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~a-G~~~~~~a~e~~~~a~~t~~~N~---p~~~~~~~di~~~~~~~~~~~~~~~~~~~~p 291 (487)
..-++||+.||.|.++.-+... |-...+.++|+++.+++..+.|. ++...+.+|+.+.. ...+
T Consensus 73 ~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~-------------~~~~ 139 (227)
T 1g8a_A 73 PGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPE-------------EYRA 139 (227)
T ss_dssp TTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGG-------------GGTT
T ss_pred CCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcc-------------hhhc
Confidence 4568999999999999988754 32136799999998777665553 34455666654310 0011
Q ss_pred CCCcccEEEccCC
Q psy13720 292 RKGEVEMLCGGPP 304 (487)
Q Consensus 292 ~~~~vd~i~ggpP 304 (487)
..+.+|+|+..+|
T Consensus 140 ~~~~~D~v~~~~~ 152 (227)
T 1g8a_A 140 LVPKVDVIFEDVA 152 (227)
T ss_dssp TCCCEEEEEECCC
T ss_pred ccCCceEEEECCC
Confidence 1246899997665
No 94
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=95.94 E-value=0.048 Score=55.08 Aligned_cols=131 Identities=11% Similarity=0.008 Sum_probs=79.9
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCC-----CCceeccchHHHHHHhhchhhhccccccC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP-----GCTVFVDDCNKILQRVIDNEVCDDKKQKL 290 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p-----~~~~~~~di~~~~~~~~~~~~~~~~~~~~ 290 (487)
..-++||++ |.|.++..+...|....+.++|+++.+++.-+.|.. +..++.+|+.+ .+
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~----------------~l 234 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRK----------------PL 234 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTS----------------CC
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhh----------------hc
Confidence 346899999 999999999887742478999999999988887742 33445555432 12
Q ss_pred CC--CCcccEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhhcCCc--EEEEecCcchhcccchhHHHHHHHHH
Q psy13720 291 PR--KGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPR--FFLLENVRNFVAFKNSMVLKMTMRCL 366 (487)
Q Consensus 291 p~--~~~vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~~~P~--~~ilENV~gl~~~~~~~~~~~i~~~l 366 (487)
|. .+.+|+|+..|||... .+ ..++. ++.+.++|. .++++-..- ......+..+.+.+
T Consensus 235 ~~~~~~~fD~Vi~~~p~~~~-----------~~--~~~l~---~~~~~LkpgG~~~~~~~~~~---~~~~~~~~~~~~~l 295 (373)
T 2qm3_A 235 PDYALHKFDTFITDPPETLE-----------AI--RAFVG---RGIATLKGPRCAGYFGITRR---ESSLDKWREIQKLL 295 (373)
T ss_dssp CTTTSSCBSEEEECCCSSHH-----------HH--HHHHH---HHHHTBCSTTCEEEEEECTT---TCCHHHHHHHHHHH
T ss_pred hhhccCCccEEEECCCCchH-----------HH--HHHHH---HHHHHcccCCeEEEEEEecC---cCCHHHHHHHHHHH
Confidence 21 2479999999997432 01 22233 234566773 446664330 01111224555666
Q ss_pred H-hCCCeeEEEEEeccC
Q psy13720 367 T-QIGYQCTFGTLQAGH 382 (487)
Q Consensus 367 ~-~~GY~~~~~~l~a~~ 382 (487)
. ++|+.+....-+...
T Consensus 296 ~~~~g~~~~~~~~~~~~ 312 (373)
T 2qm3_A 296 LNEFNVVITDIIRNFNE 312 (373)
T ss_dssp HHTSCCEEEEEEEEEEE
T ss_pred HHhcCcchhhhhhhhhh
Confidence 6 789877554444333
No 95
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=95.92 E-value=0.063 Score=50.29 Aligned_cols=148 Identities=14% Similarity=0.036 Sum_probs=86.6
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCCC---CceeccchHHHHHHhhchhhhccccccCCC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPG---CTVFVDDCNKILQRVIDNEVCDDKKQKLPR 292 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p~---~~~~~~di~~~~~~~~~~~~~~~~~~~~p~ 292 (487)
...++||+-||.|.++..+...|. ..+.++|+++.+++..+.+... ......|+.++ .+ .
T Consensus 93 ~~~~vLDiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~---------------~~-~ 155 (254)
T 1xtp_A 93 GTSRALDCGAGIGRITKNLLTKLY-ATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETA---------------TL-P 155 (254)
T ss_dssp CCSEEEEETCTTTHHHHHTHHHHC-SEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGC---------------CC-C
T ss_pred CCCEEEEECCCcCHHHHHHHHhhc-CEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHC---------------CC-C
Confidence 567899999999999999888775 5789999999999988888743 33444554321 11 1
Q ss_pred CCcccEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhhcCCc--EEEEecCcchhcc----c---chhHHHHHH
Q psy13720 293 KGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPR--FFLLENVRNFVAF----K---NSMVLKMTM 363 (487)
Q Consensus 293 ~~~vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~~~P~--~~ilENV~gl~~~----~---~~~~~~~i~ 363 (487)
.+.+|+|+....-..++ .+....++.++ .+.++|. +++.+|+..-... . .......+.
T Consensus 156 ~~~fD~v~~~~~l~~~~----------~~~~~~~l~~~---~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (254)
T 1xtp_A 156 PNTYDLIVIQWTAIYLT----------DADFVKFFKHC---QQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYK 222 (254)
T ss_dssp SSCEEEEEEESCGGGSC----------HHHHHHHHHHH---HHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHH
T ss_pred CCCeEEEEEcchhhhCC----------HHHHHHHHHHH---HHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHH
Confidence 34789998643211110 01122334443 3445664 5566654321100 0 011346778
Q ss_pred HHHHhCCCeeEEEEEeccCCCCCCcccEEEEEE
Q psy13720 364 RCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLA 396 (487)
Q Consensus 364 ~~l~~~GY~~~~~~l~a~~yGvPQ~R~R~fiia 396 (487)
+.|.+.|+.+...... -+.|...-.+.+++
T Consensus 223 ~~l~~aGf~~~~~~~~---~~~~~~~~~~~~~~ 252 (254)
T 1xtp_A 223 RLFNESGVRVVKEAFQ---EEWPTDLFPLKMYA 252 (254)
T ss_dssp HHHHHHTCCEEEEEEC---TTCCTTSCCEEEEE
T ss_pred HHHHHCCCEEEEeeec---CCCCchhheEEEEE
Confidence 8888899987554332 23455555555544
No 96
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=95.90 E-value=0.0053 Score=60.32 Aligned_cols=71 Identities=20% Similarity=0.183 Sum_probs=50.3
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhC-----CCCceeccchHHHHHHhhchhhhccccccC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN-----PGCTVFVDDCNKILQRVIDNEVCDDKKQKL 290 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~-----p~~~~~~~di~~~~~~~~~~~~~~~~~~~~ 290 (487)
..-++||+.||.|.++..+...|. -+.|+|+++.+++..+.|. ++..++.+|+.+ +
T Consensus 42 ~~~~VLDiG~G~G~lt~~La~~~~--~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~-----------------~ 102 (299)
T 2h1r_A 42 SSDIVLEIGCGTGNLTVKLLPLAK--KVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIK-----------------T 102 (299)
T ss_dssp TTCEEEEECCTTSTTHHHHTTTSS--EEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCS-----------------S
T ss_pred CcCEEEEEcCcCcHHHHHHHhcCC--EEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhh-----------------C
Confidence 456899999999999999988764 6899999999988877764 233344444321 1
Q ss_pred CCCCcccEEEccCCCc
Q psy13720 291 PRKGEVEMLCGGPPCQ 306 (487)
Q Consensus 291 p~~~~vd~i~ggpPCq 306 (487)
+ .+.+|+|++.+|++
T Consensus 103 ~-~~~~D~Vv~n~py~ 117 (299)
T 2h1r_A 103 V-FPKFDVCTANIPYK 117 (299)
T ss_dssp C-CCCCSEEEEECCGG
T ss_pred C-cccCCEEEEcCCcc
Confidence 2 13689999999965
No 97
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=95.88 E-value=0.059 Score=50.30 Aligned_cols=71 Identities=15% Similarity=0.188 Sum_probs=53.3
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhC----CCCceeccchHHHHHHhhchhhhccccccCC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN----PGCTVFVDDCNKILQRVIDNEVCDDKKQKLP 291 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~----p~~~~~~~di~~~~~~~~~~~~~~~~~~~~p 291 (487)
...++||+-||.|.++.-+...+. ..++++|+++.+++.-+.+. ++...+.+|+.+++. .++
T Consensus 60 ~~~~vLDiGcGtG~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~-------------~~~ 125 (236)
T 1zx0_A 60 KGGRVLEVGFGMAIAASKVQEAPI-DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAP-------------TLP 125 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHHTSCE-EEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGG-------------GSC
T ss_pred CCCeEEEEeccCCHHHHHHHhcCC-CeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhc-------------ccC
Confidence 567899999999999999977675 57899999999988887765 334566777765421 122
Q ss_pred CCCcccEEEc
Q psy13720 292 RKGEVEMLCG 301 (487)
Q Consensus 292 ~~~~vd~i~g 301 (487)
.+.+|+|+.
T Consensus 126 -~~~fD~V~~ 134 (236)
T 1zx0_A 126 -DGHFDGILY 134 (236)
T ss_dssp -TTCEEEEEE
T ss_pred -CCceEEEEE
Confidence 247999987
No 98
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=95.85 E-value=0.01 Score=57.65 Aligned_cols=75 Identities=12% Similarity=0.066 Sum_probs=57.9
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCC---CCceeccchHHHHHHhhchhhhccccccCCC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP---GCTVFVDDCNKILQRVIDNEVCDDKKQKLPR 292 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p---~~~~~~~di~~~~~~~~~~~~~~~~~~~~p~ 292 (487)
..-.++|||+|.|.++.-+-. |. +-+..+|.++.++++.+.|.. .+.++..|....+... .|.
T Consensus 91 n~~~~LDlfaGSGaLgiEaLS-~~-d~~vfvE~~~~a~~~L~~Nl~~~~~~~V~~~D~~~~L~~l------------~~~ 156 (283)
T 2oo3_A 91 NLNSTLSYYPGSPYFAINQLR-SQ-DRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNAL------------LPP 156 (283)
T ss_dssp SSSSSCCEEECHHHHHHHHSC-TT-SEEEEECCSHHHHHHHTTSCCTTSCEEEECSCHHHHHHHH------------CSC
T ss_pred cCCCceeEeCCcHHHHHHHcC-CC-CeEEEEeCCHHHHHHHHHHhCcCCcEEEEeCcHHHHHHHh------------cCC
Confidence 345689999999999877766 54 678999999999999999983 4567888877654321 233
Q ss_pred CCcccEEEccCC
Q psy13720 293 KGEVEMLCGGPP 304 (487)
Q Consensus 293 ~~~vd~i~ggpP 304 (487)
....|+|+.-||
T Consensus 157 ~~~fdLVfiDPP 168 (283)
T 2oo3_A 157 PEKRGLIFIDPS 168 (283)
T ss_dssp TTSCEEEEECCC
T ss_pred CCCccEEEECCC
Confidence 335899999999
No 99
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=95.83 E-value=0.0092 Score=60.78 Aligned_cols=73 Identities=21% Similarity=0.345 Sum_probs=55.4
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCC----CCceeccchHHHHHHhhchhhhccccccCC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP----GCTVFVDDCNKILQRVIDNEVCDDKKQKLP 291 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p----~~~~~~~di~~~~~~~~~~~~~~~~~~~~p 291 (487)
+..++|||.||.|.++.-+...|. -+.++|+++.+++.-+.|.. +..++..|+.+. .+
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~g~--~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~----------------~~ 294 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARMGA--EVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEA----------------LT 294 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHTTC--EEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTT----------------SC
T ss_pred CCCEEEEEeeeCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhc----------------cc
Confidence 456899999999999999988885 67899999999888777642 345556665432 11
Q ss_pred CCCcccEEEccCCCc
Q psy13720 292 RKGEVEMLCGGPPCQ 306 (487)
Q Consensus 292 ~~~~vd~i~ggpPCq 306 (487)
..+.+|+|+..||..
T Consensus 295 ~~~~fD~Ii~npp~~ 309 (381)
T 3dmg_A 295 EEARFDIIVTNPPFH 309 (381)
T ss_dssp TTCCEEEEEECCCCC
T ss_pred cCCCeEEEEECCchh
Confidence 235799999999974
No 100
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=95.79 E-value=0.067 Score=49.81 Aligned_cols=148 Identities=11% Similarity=0.100 Sum_probs=80.7
Q ss_pred CCCCeEeecccCchHHHHHHhhc-CCCcEEEEEcCcHHHHHHHHHh---CCCCceeccchHHHHHHhhchhhhccccccC
Q psy13720 215 ARPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMN---NPGCTVFVDDCNKILQRVIDNEVCDDKKQKL 290 (487)
Q Consensus 215 ~~~l~~ldLFsG~Gg~s~Gl~~a-G~~~~~~a~e~~~~a~~t~~~N---~p~~~~~~~di~~~~~~~~~~~~~~~~~~~~ 290 (487)
+..-++||+.||.|+++.-+... |-...++++|+++.+++....+ .++...+.+|+.+.. .+
T Consensus 76 ~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~--------------~~ 141 (233)
T 2ipx_A 76 KPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPH--------------KY 141 (233)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGG--------------GG
T ss_pred CCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChh--------------hh
Confidence 34568999999999999988765 3113689999998754433332 255556666654320 01
Q ss_pred C-CCCcccEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhhcCCcEEEEecCcch-hcc--cchhHHHHHHHHH
Q psy13720 291 P-RKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNF-VAF--KNSMVLKMTMRCL 366 (487)
Q Consensus 291 p-~~~~vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~~~P~~~ilENV~gl-~~~--~~~~~~~~i~~~l 366 (487)
+ ..+.+|+|+..+| . .+....++.+ +...++|.-.++=-+..- ... .....+..-++.|
T Consensus 142 ~~~~~~~D~V~~~~~-------~-------~~~~~~~~~~---~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l 204 (233)
T 2ipx_A 142 RMLIAMVDVIFADVA-------Q-------PDQTRIVALN---AHTFLRNGGHFVISIKANCIDSTASAEAVFASEVKKM 204 (233)
T ss_dssp GGGCCCEEEEEECCC-------C-------TTHHHHHHHH---HHHHEEEEEEEEEEEEHHHHCSSSCHHHHHHHHHHTT
T ss_pred cccCCcEEEEEEcCC-------C-------ccHHHHHHHH---HHHHcCCCeEEEEEEcccccccCCCHHHHHHHHHHHH
Confidence 1 1246899998665 1 0111222332 455677764332222220 000 0011233336778
Q ss_pred HhCCCeeEEEEEeccCCCCCCcccEEEEEEEc
Q psy13720 367 TQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAA 398 (487)
Q Consensus 367 ~~~GY~~~~~~l~a~~yGvPQ~R~R~fiia~~ 398 (487)
.+.||.+...+ .. .|-.+...+++|..
T Consensus 205 ~~~Gf~~~~~~-~~----~~~~~~~~~v~~~~ 231 (233)
T 2ipx_A 205 QQENMKPQEQL-TL----EPYERDHAVVVGVY 231 (233)
T ss_dssp GGGTEEEEEEE-EC----TTTSSSEEEEEEEE
T ss_pred HHCCCceEEEE-ec----CCccCCcEEEEEEe
Confidence 88899876532 11 23345677777764
No 101
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=95.79 E-value=0.009 Score=57.51 Aligned_cols=71 Identities=14% Similarity=0.114 Sum_probs=49.2
Q ss_pred CeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhC--------------CCCceeccchHHHHHHhhchhhh
Q psy13720 218 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN--------------PGCTVFVDDCNKILQRVIDNEVC 283 (487)
Q Consensus 218 l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~--------------p~~~~~~~di~~~~~~~~~~~~~ 283 (487)
-++||+|||.|..++-+...|. + +.++|+++..++..+.|. ....++++|..+++.
T Consensus 90 ~~VLDl~~G~G~dal~lA~~g~-~-V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~-------- 159 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASVGC-R-VRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALT-------- 159 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHHTC-C-EEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHST--------
T ss_pred CEEEEcCCcCCHHHHHHHHcCC-E-EEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHH--------
Confidence 6899999999999999888886 4 899999996544443331 123455566555421
Q ss_pred ccccccCCCCCcccEEEccCCC
Q psy13720 284 DDKKQKLPRKGEVEMLCGGPPC 305 (487)
Q Consensus 284 ~~~~~~~p~~~~vd~i~ggpPC 305 (487)
.++ +.+|+|+.-||=
T Consensus 160 -----~~~--~~fDvV~lDP~y 174 (258)
T 2oyr_A 160 -----DIT--PRPQVVYLDPMF 174 (258)
T ss_dssp -----TCS--SCCSEEEECCCC
T ss_pred -----hCc--ccCCEEEEcCCC
Confidence 122 258999999885
No 102
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=95.78 E-value=0.036 Score=52.84 Aligned_cols=119 Identities=14% Similarity=0.168 Sum_probs=76.2
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCC----CCceeccchHHHHHHhhchhhhccccccCC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP----GCTVFVDDCNKILQRVIDNEVCDDKKQKLP 291 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p----~~~~~~~di~~~~~~~~~~~~~~~~~~~~p 291 (487)
+..++||+.||.|.++..+...|. .+.++|+++.+++.-+.|.. ...+..+|+.+. ++
T Consensus 120 ~~~~VLDiGcG~G~l~~~la~~g~--~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~----------------~~ 181 (254)
T 2nxc_A 120 PGDKVLDLGTGSGVLAIAAEKLGG--KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAA----------------LP 181 (254)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC--EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHH----------------GG
T ss_pred CCCEEEEecCCCcHHHHHHHHhCC--eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhc----------------Cc
Confidence 456899999999999999988885 68899999998888777632 244555665432 11
Q ss_pred CCCcccEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhhcCCcEEEEecCcchhcccchhHHHHHHHHHHhCCC
Q psy13720 292 RKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGY 371 (487)
Q Consensus 292 ~~~~vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~~~P~~~ilENV~gl~~~~~~~~~~~i~~~l~~~GY 371 (487)
.+.+|+|++.++.. ....++.. +.+.++|.-.++= .++.. .....+.+.|.+.|+
T Consensus 182 -~~~fD~Vv~n~~~~---------------~~~~~l~~---~~~~LkpgG~lil--s~~~~----~~~~~v~~~l~~~Gf 236 (254)
T 2nxc_A 182 -FGPFDLLVANLYAE---------------LHAALAPR---YREALVPGGRALL--TGILK----DRAPLVREAMAGAGF 236 (254)
T ss_dssp -GCCEEEEEEECCHH---------------HHHHHHHH---HHHHEEEEEEEEE--EEEEG----GGHHHHHHHHHHTTC
T ss_pred -CCCCCEEEECCcHH---------------HHHHHHHH---HHHHcCCCCEEEE--Eeecc----CCHHHHHHHHHHCCC
Confidence 23689998765421 01123333 3445677643331 12222 235677888889999
Q ss_pred eeEEEE
Q psy13720 372 QCTFGT 377 (487)
Q Consensus 372 ~~~~~~ 377 (487)
.+....
T Consensus 237 ~~~~~~ 242 (254)
T 2nxc_A 237 RPLEEA 242 (254)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 876543
No 103
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=95.75 E-value=0.021 Score=53.95 Aligned_cols=81 Identities=16% Similarity=0.162 Sum_probs=53.6
Q ss_pred CCCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHh-------------CCCCceeccchHHHHHHhhchh
Q psy13720 215 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMN-------------NPGCTVFVDDCNKILQRVIDNE 281 (487)
Q Consensus 215 ~~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N-------------~p~~~~~~~di~~~~~~~~~~~ 281 (487)
+...++||++||.|+++..+...+-..-+.++|+++.+++..+.| .++..++.+|+.+.+
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l------- 120 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFL------- 120 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCG-------
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHH-------
Confidence 355689999999999999998876323689999999988766543 234455666654321
Q ss_pred hhccccccCCCCCcccEEEccCCCcCc
Q psy13720 282 VCDDKKQKLPRKGEVEMLCGGPPCQGF 308 (487)
Q Consensus 282 ~~~~~~~~~p~~~~vd~i~ggpPCq~f 308 (487)
...++ .+.+|.|+.-.|...+
T Consensus 121 -----~~~~~-~~~~d~v~~~~p~p~~ 141 (246)
T 2vdv_E 121 -----PNFFE-KGQLSKMFFCFPDPHF 141 (246)
T ss_dssp -----GGTSC-TTCEEEEEEESCCCC-
T ss_pred -----HHhcc-ccccCEEEEECCCccc
Confidence 11122 3567888777666443
No 104
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=95.75 E-value=0.017 Score=58.25 Aligned_cols=79 Identities=16% Similarity=0.108 Sum_probs=55.6
Q ss_pred CCCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCC-----------CCceeccchHHHHHHhhchhhh
Q psy13720 215 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP-----------GCTVFVDDCNKILQRVIDNEVC 283 (487)
Q Consensus 215 ~~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p-----------~~~~~~~di~~~~~~~~~~~~~ 283 (487)
++.-+|||+|||.||=++-+.+.+-...++|+|+++..++..+.|.. .+.+.+.|...+.
T Consensus 147 ~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~--------- 217 (359)
T 4fzv_A 147 QPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWG--------- 217 (359)
T ss_dssp CTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHH---------
T ss_pred CCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcc---------
Confidence 34568999999999999888776643468899999999988877641 2233444443321
Q ss_pred ccccccCCCCCcccEEEccCCCcCc
Q psy13720 284 DDKKQKLPRKGEVEMLCGGPPCQGF 308 (487)
Q Consensus 284 ~~~~~~~p~~~~vd~i~ggpPCq~f 308 (487)
.. ..+.+|.|..-+||.|-
T Consensus 218 ----~~--~~~~fD~VLlDaPCSg~ 236 (359)
T 4fzv_A 218 ----EL--EGDTYDRVLVDVPCTTD 236 (359)
T ss_dssp ----HH--STTCEEEEEEECCCCCH
T ss_pred ----hh--ccccCCEEEECCccCCC
Confidence 00 13479999999999873
No 105
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=95.74 E-value=0.019 Score=54.57 Aligned_cols=54 Identities=19% Similarity=0.093 Sum_probs=44.2
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCC---CCceeccchH
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP---GCTVFVDDCN 271 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p---~~~~~~~di~ 271 (487)
..-++||+.||.|.++..+...|. -+.++|+|+.+++..+.|.. +..++++|+.
T Consensus 30 ~~~~VLDiG~G~G~lt~~l~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~D~~ 86 (244)
T 1qam_A 30 EHDNIFEIGSGKGHFTLELVQRCN--FVTAIEIDHKLCKTTENKLVDHDNFQVLNKDIL 86 (244)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHSS--EEEEECSCHHHHHHHHHHTTTCCSEEEECCCGG
T ss_pred CCCEEEEEeCCchHHHHHHHHcCC--eEEEEECCHHHHHHHHHhhccCCCeEEEEChHH
Confidence 456899999999999999988873 68899999999999888863 4456666654
No 106
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=95.68 E-value=0.026 Score=55.55 Aligned_cols=80 Identities=15% Similarity=0.079 Sum_probs=55.5
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCC----CCceeccchHHHHHHhhchhhhccccccCC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP----GCTVFVDDCNKILQRVIDNEVCDDKKQKLP 291 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p----~~~~~~~di~~~~~~~~~~~~~~~~~~~~p 291 (487)
..-++||++||.||.+..+...+-...++++|+|+.|++.-+.|.. ...++.+|..++.... .. +
T Consensus 26 ~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~~~l------~~----~- 94 (301)
T 1m6y_A 26 DEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLL------KT----L- 94 (301)
T ss_dssp TTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHH------HH----T-
T ss_pred CCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHHHHH------Hh----c-
Confidence 4458999999999999998765211368999999999998887752 3456677766542111 00 0
Q ss_pred CCCcccEEEccCCCc
Q psy13720 292 RKGEVEMLCGGPPCQ 306 (487)
Q Consensus 292 ~~~~vd~i~ggpPCq 306 (487)
..+.+|.|+.-+||.
T Consensus 95 g~~~~D~Vl~D~gvS 109 (301)
T 1m6y_A 95 GIEKVDGILMDLGVS 109 (301)
T ss_dssp TCSCEEEEEEECSCC
T ss_pred CCCCCCEEEEcCccc
Confidence 013689999888874
No 107
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=95.62 E-value=0.032 Score=53.58 Aligned_cols=117 Identities=15% Similarity=0.117 Sum_probs=72.3
Q ss_pred CCCCeEeecccCchHHHHHHhhc-CCCcEEEEEcCcHHHHHHHHHhCC------CCceeccchHHHHHHhhchhhhcccc
Q psy13720 215 ARPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMNNP------GCTVFVDDCNKILQRVIDNEVCDDKK 287 (487)
Q Consensus 215 ~~~l~~ldLFsG~Gg~s~Gl~~a-G~~~~~~a~e~~~~a~~t~~~N~p------~~~~~~~di~~~~~~~~~~~~~~~~~ 287 (487)
....++||+.||.|.++.-+... |-...++++|+++.+++.-+.|.. ...+..+|+.+.
T Consensus 111 ~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-------------- 176 (277)
T 1o54_A 111 KEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG-------------- 176 (277)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC--------------
T ss_pred CCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc--------------
Confidence 35568999999999999988776 421368999999999988887742 233444443221
Q ss_pred ccCCCCCcccEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhhcCCcEEEEecCcchhcccchhHHHHHHHHHH
Q psy13720 288 QKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLT 367 (487)
Q Consensus 288 ~~~p~~~~vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~~~P~~~ilENV~gl~~~~~~~~~~~i~~~l~ 367 (487)
++ .+.+|+|+..+|+. ..++.... +.++|.-.++=.++.. ..+..+++.|.
T Consensus 177 --~~-~~~~D~V~~~~~~~-----------------~~~l~~~~---~~L~pgG~l~~~~~~~------~~~~~~~~~l~ 227 (277)
T 1o54_A 177 --FD-EKDVDALFLDVPDP-----------------WNYIDKCW---EALKGGGRFATVCPTT------NQVQETLKKLQ 227 (277)
T ss_dssp --CS-CCSEEEEEECCSCG-----------------GGTHHHHH---HHEEEEEEEEEEESSH------HHHHHHHHHHH
T ss_pred --cc-CCccCEEEECCcCH-----------------HHHHHHHH---HHcCCCCEEEEEeCCH------HHHHHHHHHHH
Confidence 22 24699999876642 12333333 3456754332212211 23456777788
Q ss_pred hCCCeeE
Q psy13720 368 QIGYQCT 374 (487)
Q Consensus 368 ~~GY~~~ 374 (487)
+.||...
T Consensus 228 ~~gf~~~ 234 (277)
T 1o54_A 228 ELPFIRI 234 (277)
T ss_dssp HSSEEEE
T ss_pred HCCCcee
Confidence 8898643
No 108
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=95.61 E-value=0.02 Score=54.98 Aligned_cols=76 Identities=14% Similarity=0.178 Sum_probs=55.3
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcH-------HHHHHHHHhC-----CC-CceeccchHHHHHHhhchhh
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDS-------AAATAFKMNN-----PG-CTVFVDDCNKILQRVIDNEV 282 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~-------~a~~t~~~N~-----p~-~~~~~~di~~~~~~~~~~~~ 282 (487)
..-++||++||.|.++.-+...|. .+.++|+++ .+++..+.|. .+ ..++++|..+++......
T Consensus 83 ~~~~VLDlgcG~G~~a~~lA~~g~--~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~-- 158 (258)
T 2r6z_A 83 AHPTVWDATAGLGRDSFVLASLGL--TVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKT-- 158 (258)
T ss_dssp GCCCEEETTCTTCHHHHHHHHTTC--CEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHH--
T ss_pred CcCeEEEeeCccCHHHHHHHHhCC--EEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhcc--
Confidence 346799999999999999888875 478999999 8888777653 12 567788887764321100
Q ss_pred hccccccCCCCCcccEEEccCCC
Q psy13720 283 CDDKKQKLPRKGEVEMLCGGPPC 305 (487)
Q Consensus 283 ~~~~~~~~p~~~~vd~i~ggpPC 305 (487)
.+.+|+|+.-||=
T Consensus 159 ----------~~~fD~V~~dP~~ 171 (258)
T 2r6z_A 159 ----------QGKPDIVYLDPMY 171 (258)
T ss_dssp ----------HCCCSEEEECCCC
T ss_pred ----------CCCccEEEECCCC
Confidence 0257999988764
No 109
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=95.60 E-value=0.02 Score=52.15 Aligned_cols=74 Identities=16% Similarity=0.162 Sum_probs=54.4
Q ss_pred CCCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCC---CCceeccchHHHHHHhhchhhhccccccCC
Q psy13720 215 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP---GCTVFVDDCNKILQRVIDNEVCDDKKQKLP 291 (487)
Q Consensus 215 ~~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p---~~~~~~~di~~~~~~~~~~~~~~~~~~~~p 291 (487)
....++||+.||.|.++.-+...|. ..+.++|+++.+++..+.+.. ...+..+|+.++ .++
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~~-~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~---------------~~~ 104 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGGF-PNVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKL---------------DFP 104 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTTC-CCEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSC---------------CSC
T ss_pred CCCCeEEEECCCCcHHHHHHHHcCC-CcEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcC---------------CCC
Confidence 3566899999999999999998886 478999999999998888864 344455554321 111
Q ss_pred CCCcccEEEccCCC
Q psy13720 292 RKGEVEMLCGGPPC 305 (487)
Q Consensus 292 ~~~~vd~i~ggpPC 305 (487)
.+.+|+|+...+.
T Consensus 105 -~~~fD~v~~~~~~ 117 (215)
T 2pxx_A 105 -SASFDVVLEKGTL 117 (215)
T ss_dssp -SSCEEEEEEESHH
T ss_pred -CCcccEEEECcch
Confidence 3479999876654
No 110
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=95.60 E-value=0.072 Score=48.81 Aligned_cols=46 Identities=13% Similarity=0.109 Sum_probs=38.9
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP 261 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p 261 (487)
...++||+-||.|.++.-+...+....+.++|+++.+++..+.+..
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~ 74 (217)
T 3jwh_A 29 NARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLD 74 (217)
T ss_dssp TCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHH
Confidence 4568999999999999999887643478999999999998888754
No 111
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=95.56 E-value=0.025 Score=53.44 Aligned_cols=45 Identities=22% Similarity=0.154 Sum_probs=36.3
Q ss_pred CCCeEeecccCchHHHHHHhhc--CCCcEEEEEcCcHHHHHHHHHhC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKS--GVARSTWAIEFDSAAATAFKMNN 260 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~a--G~~~~~~a~e~~~~a~~t~~~N~ 260 (487)
...++||++||.|.++.-+... +-...++++|+++.+++.-+.|.
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~ 97 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNL 97 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHH
Confidence 4678999999999999888765 11136899999999999888764
No 112
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=95.55 E-value=0.067 Score=51.37 Aligned_cols=127 Identities=14% Similarity=0.032 Sum_probs=75.6
Q ss_pred CCCCeEeecccCchHHHHHHhhc-CCCcEEEEEcCcHHHHHHHHHhC------CCCceeccchHHHHHHhhchhhhcccc
Q psy13720 215 ARPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMNN------PGCTVFVDDCNKILQRVIDNEVCDDKK 287 (487)
Q Consensus 215 ~~~l~~ldLFsG~Gg~s~Gl~~a-G~~~~~~a~e~~~~a~~t~~~N~------p~~~~~~~di~~~~~~~~~~~~~~~~~ 287 (487)
....++||+.||.|+++.-+... +-...+.++|+++.+++..+.|. ++..+..+|+.+
T Consensus 109 ~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~--------------- 173 (275)
T 1yb2_A 109 RPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD--------------- 173 (275)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT---------------
T ss_pred CCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhc---------------
Confidence 45678999999999999988776 21136889999999988777764 223344444321
Q ss_pred ccCCCCCcccEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhhcCCcEEEEecCcchhcccchhHHHHHHHHHH
Q psy13720 288 QKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLT 367 (487)
Q Consensus 288 ~~~p~~~~vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~~~P~~~ilENV~gl~~~~~~~~~~~i~~~l~ 367 (487)
.++ .+.+|+|+..+|- . ..++.+. .+.++|.-.++=.++.. .....+++.|.
T Consensus 174 -~~~-~~~fD~Vi~~~~~----------------~-~~~l~~~---~~~LkpgG~l~i~~~~~------~~~~~~~~~l~ 225 (275)
T 1yb2_A 174 -FIS-DQMYDAVIADIPD----------------P-WNHVQKI---ASMMKPGSVATFYLPNF------DQSEKTVLSLS 225 (275)
T ss_dssp -CCC-SCCEEEEEECCSC----------------G-GGSHHHH---HHTEEEEEEEEEEESSH------HHHHHHHHHSG
T ss_pred -cCc-CCCccEEEEcCcC----------------H-HHHHHHH---HHHcCCCCEEEEEeCCH------HHHHHHHHHHH
Confidence 122 2468999875441 1 1233333 34467754333222221 23466778888
Q ss_pred hCCCeeEEEE-EeccCCC
Q psy13720 368 QIGYQCTFGT-LQAGHFG 384 (487)
Q Consensus 368 ~~GY~~~~~~-l~a~~yG 384 (487)
+.||...... .....|.
T Consensus 226 ~~Gf~~~~~~~~~~~~~~ 243 (275)
T 1yb2_A 226 ASGMHHLETVELMKRRIL 243 (275)
T ss_dssp GGTEEEEEEEEEEECCCC
T ss_pred HCCCeEEEEEEEecceeE
Confidence 8999754332 3333444
No 113
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=95.51 E-value=0.48 Score=45.72 Aligned_cols=153 Identities=14% Similarity=0.190 Sum_probs=91.7
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCCC---------CceeccchHHHHHHhhchhhhccc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPG---------CTVFVDDCNKILQRVIDNEVCDDK 286 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p~---------~~~~~~di~~~~~~~~~~~~~~~~ 286 (487)
.+.++|||-||.|+++.-+....-...+.++|+|+.+++.-+.+++. ..++.+|..+++..
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~---------- 147 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLEN---------- 147 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHH----------
T ss_pred CCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHh----------
Confidence 34589999999999999887653125789999999999998888753 35667777665321
Q ss_pred cccCCCCCcccEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhhcCCcEEEEecCcchhcccchhHHHHHHHHH
Q psy13720 287 KQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCL 366 (487)
Q Consensus 287 ~~~~p~~~~vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~~~P~~~ilENV~gl~~~~~~~~~~~i~~~l 366 (487)
..+.+|+|+..++.. +... ........+. .+.+.++|.-+++=|..... .....+..+++.|
T Consensus 148 -----~~~~fD~Ii~d~~~~-~~~~-------~~l~~~~~l~---~~~~~L~pgG~lv~~~~~~~--~~~~~~~~~~~~l 209 (283)
T 2i7c_A 148 -----VTNTYDVIIVDSSDP-IGPA-------ETLFNQNFYE---KIYNALKPNGYCVAQCESLW--IHVGTIKNMIGYA 209 (283)
T ss_dssp -----CCSCEEEEEEECCCT-TTGG-------GGGSSHHHHH---HHHHHEEEEEEEEEECCCTT--TCHHHHHHHHHHH
T ss_pred -----CCCCceEEEEcCCCC-CCcc-------hhhhHHHHHH---HHHHhcCCCcEEEEECCCcc--cCHHHHHHHHHHH
Confidence 124689999865432 1110 0000112222 23455689887776654322 1234567777888
Q ss_pred HhCCCeeEEEEEeccCCCCCCcccEEEEEEEcC
Q psy13720 367 TQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAP 399 (487)
Q Consensus 367 ~~~GY~~~~~~l~a~~yGvPQ~R~R~fiia~~~ 399 (487)
.+.--.+......--.|.. -.-.|++|++.
T Consensus 210 ~~~F~~v~~~~~~vP~y~~---g~~g~~~~s~~ 239 (283)
T 2i7c_A 210 KKLFKKVEYANISIPTYPC---GCIGILCCSKT 239 (283)
T ss_dssp HTTCSEEEEEEEECTTSGG---GEEEEEEEESS
T ss_pred HHHCCceEEEEEEcCCcCC---CcEEEEEEeCC
Confidence 7764444443333333311 22458888765
No 114
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=95.51 E-value=0.046 Score=50.86 Aligned_cols=78 Identities=19% Similarity=0.197 Sum_probs=56.0
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHh-----CCCCceeccchHHHHHHhhchhhhccccccC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMN-----NPGCTVFVDDCNKILQRVIDNEVCDDKKQKL 290 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N-----~p~~~~~~~di~~~~~~~~~~~~~~~~~~~~ 290 (487)
..-++||+.||.|.++..+...+-...++++|+++.+++..+.| ..+..++.+|+.+++... +
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~------------~ 101 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKM------------I 101 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHH------------S
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHH------------c
Confidence 34579999999999999987664323688999999988766654 245667888988764321 2
Q ss_pred CCCCcccEEEccCCCc
Q psy13720 291 PRKGEVEMLCGGPPCQ 306 (487)
Q Consensus 291 p~~~~vd~i~ggpPCq 306 (487)
+ .+.+|.|+.-+|..
T Consensus 102 ~-~~~~d~v~~~~~~p 116 (218)
T 3dxy_A 102 P-DNSLRMVQLFFPDP 116 (218)
T ss_dssp C-TTCEEEEEEESCCC
T ss_pred C-CCChheEEEeCCCC
Confidence 2 34789888876654
No 115
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=95.49 E-value=0.13 Score=48.82 Aligned_cols=150 Identities=13% Similarity=0.079 Sum_probs=85.8
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhC-----CCCceeccchHHHHHHhhchhhhccccccC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN-----PGCTVFVDDCNKILQRVIDNEVCDDKKQKL 290 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~-----p~~~~~~~di~~~~~~~~~~~~~~~~~~~~ 290 (487)
...++||+.||.|..++-+....-...+.++|+++.+++..+.|. .+..++++|+.++.. . .
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~------------~-~ 146 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAR------------E-A 146 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTT------------S-T
T ss_pred CCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhc------------c-c
Confidence 456899999999988887765521136899999999998887763 345677778766510 0 0
Q ss_pred CCCCcccEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhhcCCcE--EEEecCcchhcccchhHHHHHHHHHHh
Q psy13720 291 PRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRF--FLLENVRNFVAFKNSMVLKMTMRCLTQ 368 (487)
Q Consensus 291 p~~~~vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~~~P~~--~ilENV~gl~~~~~~~~~~~i~~~l~~ 368 (487)
...+.+|+|+.. .+ .+ ...++... ...++|.- +++.... ...-+..+...+..
T Consensus 147 ~~~~~fD~I~s~----a~-----------~~-~~~ll~~~---~~~LkpgG~l~~~~g~~------~~~e~~~~~~~l~~ 201 (249)
T 3g89_A 147 GHREAYARAVAR----AV-----------AP-LCVLSELL---LPFLEVGGAAVAMKGPR------VEEELAPLPPALER 201 (249)
T ss_dssp TTTTCEEEEEEE----SS-----------CC-HHHHHHHH---GGGEEEEEEEEEEECSC------CHHHHTTHHHHHHH
T ss_pred ccCCCceEEEEC----Cc-----------CC-HHHHHHHH---HHHcCCCeEEEEEeCCC------cHHHHHHHHHHHHH
Confidence 012479999852 11 11 12233322 24456654 4444321 11234556667777
Q ss_pred CCCeeEEEEEeccCCCCCC-cccEEEEEEEcCCCCCCCCC
Q psy13720 369 IGYQCTFGTLQAGHFGVSQ-TRRRAIVLAAAPGEVLPKYP 407 (487)
Q Consensus 369 ~GY~~~~~~l~a~~yGvPQ-~R~R~fiia~~~~~~~p~~P 407 (487)
+|+.+... ..+.+|. .-.|.+++..+.......+|
T Consensus 202 ~G~~~~~~----~~~~~p~~~~~R~l~~~~k~~~t~~~yP 237 (249)
T 3g89_A 202 LGGRLGEV----LALQLPLSGEARHLVVLEKTAPTPPAYP 237 (249)
T ss_dssp HTEEEEEE----EEEECTTTCCEEEEEEEEECSCCCTTCS
T ss_pred cCCeEEEE----EEeeCCCCCCcEEEEEEEeCCCCCCCCC
Confidence 88876443 2335554 24577776665443333343
No 116
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=95.46 E-value=0.018 Score=54.44 Aligned_cols=80 Identities=18% Similarity=0.079 Sum_probs=52.2
Q ss_pred CCCeEeecccCchHHHHHHhhc--CCCcEEEEEcCcHHHHHHHHHhCC-----C-CceeccchHHHHHHhhchhhhcccc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKS--GVARSTWAIEFDSAAATAFKMNNP-----G-CTVFVDDCNKILQRVIDNEVCDDKK 287 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~a--G~~~~~~a~e~~~~a~~t~~~N~p-----~-~~~~~~di~~~~~~~~~~~~~~~~~ 287 (487)
...++||++||.|+++.-+... +. .+.++|+++.+++.-+.|.. + ..++++|+.+. ..
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~------------~~ 130 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGW--YFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTL------------LM 130 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCC--EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCS------------ST
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCC--eEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhh------------hh
Confidence 4568999999999988777554 43 68899999999888776631 1 34455554321 00
Q ss_pred ccCCC--CCcccEEEccCCCcCcc
Q psy13720 288 QKLPR--KGEVEMLCGGPPCQGFS 309 (487)
Q Consensus 288 ~~~p~--~~~vd~i~ggpPCq~fS 309 (487)
..++. .+.+|+|+..||+-...
T Consensus 131 ~~~~~~~~~~fD~i~~npp~~~~~ 154 (254)
T 2h00_A 131 DALKEESEIIYDFCMCNPPFFANQ 154 (254)
T ss_dssp TTSTTCCSCCBSEEEECCCCC---
T ss_pred hhhhcccCCcccEEEECCCCccCc
Confidence 11221 14699999999987554
No 117
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=95.45 E-value=0.032 Score=56.19 Aligned_cols=77 Identities=18% Similarity=0.232 Sum_probs=59.5
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCCC-------------CceeccchHHHHHHhhchhh
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPG-------------CTVFVDDCNKILQRVIDNEV 282 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p~-------------~~~~~~di~~~~~~~~~~~~ 282 (487)
.+-+||+|++|.|++..-+...+. +-+.+||+|+.+++.-+.|++. ..++.+|...+++....
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~-~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~--- 263 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAK--- 263 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHH---
T ss_pred CCCEEEEEECChhHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhc---
Confidence 567899999999999988777775 6789999999999999999862 45677888877643210
Q ss_pred hccccccCCCCCcccEEEccCCC
Q psy13720 283 CDDKKQKLPRKGEVEMLCGGPPC 305 (487)
Q Consensus 283 ~~~~~~~~p~~~~vd~i~ggpPC 305 (487)
..+.+|+|+.-+|=
T Consensus 264 ---------~~~~fDvII~D~~d 277 (364)
T 2qfm_A 264 ---------EGREFDYVINDLTA 277 (364)
T ss_dssp ---------HTCCEEEEEEECCS
T ss_pred ---------cCCCceEEEECCCC
Confidence 01368999998764
No 118
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=95.45 E-value=0.097 Score=49.12 Aligned_cols=71 Identities=11% Similarity=0.072 Sum_probs=54.1
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCC--CCceeccchHHHHHHhhchhhhccccccCCCC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP--GCTVFVDDCNKILQRVIDNEVCDDKKQKLPRK 293 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p--~~~~~~~di~~~~~~~~~~~~~~~~~~~~p~~ 293 (487)
...++||+-||.|.++.-+...|. ..+.++|+++.+++..+.+.. ......+|+.++ .++ .
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~---------------~~~-~ 106 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHGA-KKVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDI---------------AIE-P 106 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGC---------------CCC-T
T ss_pred CCCEEEEECCCCCHHHHHHHHcCC-CEEEEEECCHHHHHHHHHhhccCCeEEEEcchhhC---------------CCC-C
Confidence 567899999999999999999886 578999999999998888864 344555565321 111 3
Q ss_pred CcccEEEccC
Q psy13720 294 GEVEMLCGGP 303 (487)
Q Consensus 294 ~~vd~i~ggp 303 (487)
+.+|+|+...
T Consensus 107 ~~fD~v~~~~ 116 (253)
T 3g5l_A 107 DAYNVVLSSL 116 (253)
T ss_dssp TCEEEEEEES
T ss_pred CCeEEEEEch
Confidence 5799998754
No 119
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=95.44 E-value=0.19 Score=46.14 Aligned_cols=46 Identities=22% Similarity=0.242 Sum_probs=39.7
Q ss_pred CCCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCCC
Q psy13720 215 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPG 262 (487)
Q Consensus 215 ~~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p~ 262 (487)
+...++||+.||.|.++.-+...|. -+.++|+++.+++..+.+...
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~ 74 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASKGY--SVTGIDINSEAIRLAETAARS 74 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHTTC
T ss_pred CCCCeEEEECCCCCHHHHHHHhCCC--eEEEEECCHHHHHHHHHHHHh
Confidence 3567899999999999999988886 578999999999988887654
No 120
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=95.41 E-value=0.15 Score=46.46 Aligned_cols=131 Identities=15% Similarity=0.084 Sum_probs=76.7
Q ss_pred CCCCeEeecccCchHHHHHHhhcC-CCcEEEEEcCcHHHHHHHHHhC-----CCCceeccchHHHHHHhhchhhhccccc
Q psy13720 215 ARPLRCLEVFAGAGGLSRGLDKSG-VARSTWAIEFDSAAATAFKMNN-----PGCTVFVDDCNKILQRVIDNEVCDDKKQ 288 (487)
Q Consensus 215 ~~~l~~ldLFsG~Gg~s~Gl~~aG-~~~~~~a~e~~~~a~~t~~~N~-----p~~~~~~~di~~~~~~~~~~~~~~~~~~ 288 (487)
....++||+-||.|.++.-+...+ -...+.++|+++.+++..+.+. ++..+..+|+.++
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~--------------- 100 (219)
T 3dh0_A 36 KEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKI--------------- 100 (219)
T ss_dssp CTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBC---------------
T ss_pred CCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccC---------------
Confidence 356789999999999999987765 2136899999999888776653 3344555554321
Q ss_pred cCCCCCcccEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhhcCCc--EEEEecCcchhcc----cchhHHHHH
Q psy13720 289 KLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPR--FFLLENVRNFVAF----KNSMVLKMT 362 (487)
Q Consensus 289 ~~p~~~~vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~~~P~--~~ilENV~gl~~~----~~~~~~~~i 362 (487)
.++ .+.+|+|+....-..+ .+ ...++.++. +.++|. +++.+-...-... ........+
T Consensus 101 ~~~-~~~fD~v~~~~~l~~~-----------~~-~~~~l~~~~---~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~ 164 (219)
T 3dh0_A 101 PLP-DNTVDFIFMAFTFHEL-----------SE-PLKFLEELK---RVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEV 164 (219)
T ss_dssp SSC-SSCEEEEEEESCGGGC-----------SS-HHHHHHHHH---HHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHH
T ss_pred CCC-CCCeeEEEeehhhhhc-----------CC-HHHHHHHHH---HHhCCCeEEEEEEecccccccCCchhcccCHHHH
Confidence 111 3468999865332211 11 123444443 445674 3444432221100 011234678
Q ss_pred HHHHHhCCCeeEEE
Q psy13720 363 MRCLTQIGYQCTFG 376 (487)
Q Consensus 363 ~~~l~~~GY~~~~~ 376 (487)
.+.|.+.|+.+...
T Consensus 165 ~~~l~~~Gf~~~~~ 178 (219)
T 3dh0_A 165 GLILEDAGIRVGRV 178 (219)
T ss_dssp HHHHHHTTCEEEEE
T ss_pred HHHHHHCCCEEEEE
Confidence 88899999986543
No 121
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=95.41 E-value=0.011 Score=57.36 Aligned_cols=72 Identities=22% Similarity=0.232 Sum_probs=54.5
Q ss_pred CCCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCCC--CceeccchHHHHHHhhchhhhccccccCCC
Q psy13720 215 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPG--CTVFVDDCNKILQRVIDNEVCDDKKQKLPR 292 (487)
Q Consensus 215 ~~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p~--~~~~~~di~~~~~~~~~~~~~~~~~~~~p~ 292 (487)
... ++||+-||.|.++..|...|. -+.|+|+|+..++..+.++++ ..++++|+.++ . ++.
T Consensus 46 ~~~-~VLEIG~G~G~lt~~L~~~~~--~V~avEid~~~~~~l~~~~~~~~v~vi~~D~l~~------------~---~~~ 107 (271)
T 3fut_A 46 FTG-PVFEVGPGLGALTRALLEAGA--EVTAIEKDLRLRPVLEETLSGLPVRLVFQDALLY------------P---WEE 107 (271)
T ss_dssp CCS-CEEEECCTTSHHHHHHHHTTC--CEEEEESCGGGHHHHHHHTTTSSEEEEESCGGGS------------C---GGG
T ss_pred CCC-eEEEEeCchHHHHHHHHHcCC--EEEEEECCHHHHHHHHHhcCCCCEEEEECChhhC------------C---hhh
Confidence 355 899999999999999998884 588999999999999988764 45666776432 0 111
Q ss_pred CCcccEEEccCC
Q psy13720 293 KGEVEMLCGGPP 304 (487)
Q Consensus 293 ~~~vd~i~ggpP 304 (487)
....|.|+|.+|
T Consensus 108 ~~~~~~iv~NlP 119 (271)
T 3fut_A 108 VPQGSLLVANLP 119 (271)
T ss_dssp SCTTEEEEEEEC
T ss_pred ccCccEEEecCc
Confidence 114688999888
No 122
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=95.41 E-value=0.074 Score=48.76 Aligned_cols=46 Identities=13% Similarity=0.070 Sum_probs=38.7
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP 261 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p 261 (487)
...++||+-||.|.++.-+...+-...+.++|+++.+++..+.+..
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~ 74 (219)
T 3jwg_A 29 NAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLK 74 (219)
T ss_dssp TCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHT
T ss_pred CCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHH
Confidence 4568999999999999999887642478999999999998887754
No 123
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=95.39 E-value=0.021 Score=58.31 Aligned_cols=73 Identities=14% Similarity=0.101 Sum_probs=50.4
Q ss_pred CCCeEeecccCchHHHHHHhhcCCC--------------------------------------cEEEEEcCcHHHHHHHH
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVA--------------------------------------RSTWAIEFDSAAATAFK 257 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~--------------------------------------~~~~a~e~~~~a~~t~~ 257 (487)
..-+++|+|||.|++..-+...+.. -.++++|+|+.+++.-+
T Consensus 201 ~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~Ar 280 (393)
T 3k0b_A 201 PDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIAK 280 (393)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHH
T ss_pred CCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHHH
Confidence 4567999999999987655443220 13899999999999888
Q ss_pred HhCC------CCceeccchHHHHHHhhchhhhccccccCCCCCcccEEEccCCC
Q psy13720 258 MNNP------GCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPC 305 (487)
Q Consensus 258 ~N~p------~~~~~~~di~~~~~~~~~~~~~~~~~~~~p~~~~vd~i~ggpPC 305 (487)
.|.. ...+..+|+.+ ++..+.+|+|+.-||-
T Consensus 281 ~Na~~~gl~~~I~~~~~D~~~-----------------~~~~~~fD~Iv~NPPY 317 (393)
T 3k0b_A 281 QNAVEAGLGDLITFRQLQVAD-----------------FQTEDEYGVVVANPPY 317 (393)
T ss_dssp HHHHHTTCTTCSEEEECCGGG-----------------CCCCCCSCEEEECCCC
T ss_pred HHHHHcCCCCceEEEECChHh-----------------CCCCCCCCEEEECCCC
Confidence 8742 13344555432 2223479999999994
No 124
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=95.38 E-value=0.043 Score=51.73 Aligned_cols=115 Identities=14% Similarity=0.071 Sum_probs=73.5
Q ss_pred CCCCeEeecccCchHHHHHHhhc-CCCcEEEEEcCcHHHHHHHHHhC-----CC-CceeccchHHHHHHhhchhhhcccc
Q psy13720 215 ARPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMNN-----PG-CTVFVDDCNKILQRVIDNEVCDDKK 287 (487)
Q Consensus 215 ~~~l~~ldLFsG~Gg~s~Gl~~a-G~~~~~~a~e~~~~a~~t~~~N~-----p~-~~~~~~di~~~~~~~~~~~~~~~~~ 287 (487)
.+.-++||+.||.|+++..+... |-...+.++|+++.+++.-+.|. ++ ..+..+|+.+
T Consensus 92 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--------------- 156 (255)
T 3mb5_A 92 SPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYE--------------- 156 (255)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGG---------------
T ss_pred CCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhh---------------
Confidence 35668999999999999998877 42146899999999888777763 23 4455556532
Q ss_pred ccCCCCCcccEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhhcCCcEEEEecCcchhcccchhHHHHHHHHHH
Q psy13720 288 QKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLT 367 (487)
Q Consensus 288 ~~~p~~~~vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~~~P~~~ilENV~gl~~~~~~~~~~~i~~~l~ 367 (487)
.++ .+.+|+|+..+|+. ..++.++. +.++|.-.++=.++.. .....+.+.|.
T Consensus 157 -~~~-~~~~D~v~~~~~~~-----------------~~~l~~~~---~~L~~gG~l~~~~~~~------~~~~~~~~~l~ 208 (255)
T 3mb5_A 157 -GIE-EENVDHVILDLPQP-----------------ERVVEHAA---KALKPGGFFVAYTPCS------NQVMRLHEKLR 208 (255)
T ss_dssp -CCC-CCSEEEEEECSSCG-----------------GGGHHHHH---HHEEEEEEEEEEESSH------HHHHHHHHHHH
T ss_pred -ccC-CCCcCEEEECCCCH-----------------HHHHHHHH---HHcCCCCEEEEEECCH------HHHHHHHHHHH
Confidence 122 24699999876632 12344433 4456754443222222 23566778888
Q ss_pred hCC--Ce
Q psy13720 368 QIG--YQ 372 (487)
Q Consensus 368 ~~G--Y~ 372 (487)
+.| |.
T Consensus 209 ~~g~~f~ 215 (255)
T 3mb5_A 209 EFKDYFM 215 (255)
T ss_dssp HTGGGBS
T ss_pred HcCCCcc
Confidence 888 64
No 125
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=95.36 E-value=0.17 Score=49.36 Aligned_cols=152 Identities=13% Similarity=0.106 Sum_probs=87.9
Q ss_pred CCCeEeecccCchHHHHHHhhc-CCCcEEEEEcCcHHHHHHHHHhCC----------CCceeccchHHHHHHhhchhhhc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMNNP----------GCTVFVDDCNKILQRVIDNEVCD 284 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~a-G~~~~~~a~e~~~~a~~t~~~N~p----------~~~~~~~di~~~~~~~~~~~~~~ 284 (487)
.+-+||||.||.|+++.-+... +. .-+.++|+|+.+++.-+.|++ ...++.+|..+++.
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~-~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~--------- 152 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNV-ESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVN--------- 152 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTC-CEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC------------
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCC-CEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHh---------
Confidence 3458999999999999888765 44 678999999999998887653 34566666543321
Q ss_pred cccccCCCCCcccEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhhcCCcEEEEecCcchhcccchhHHHHHHH
Q psy13720 285 DKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMR 364 (487)
Q Consensus 285 ~~~~~~p~~~~vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~~~P~~~ilENV~gl~~~~~~~~~~~i~~ 364 (487)
. ..+.+|+|+.-+|.. +.... ......++. .+.+.++|.-+++=|..... .....+..+++
T Consensus 153 ---~---~~~~fDvIi~D~~~p-~~~~~-------~l~~~~f~~---~~~~~LkpgG~lv~~~~s~~--~~~~~~~~~~~ 213 (294)
T 3adn_A 153 ---Q---TSQTFDVIISDCTDP-IGPGE-------SLFTSAFYE---GCKRCLNPGGIFVAQNGVCF--LQQEEAIDSHR 213 (294)
T ss_dssp ---C---CCCCEEEEEECC------------------CCHHHHH---HHHHTEEEEEEEEEEEEECS--SCCHHHHHHHH
T ss_pred ---h---cCCCccEEEECCCCc-cCcch-------hccHHHHHH---HHHHhcCCCCEEEEecCCcc--cchHHHHHHHH
Confidence 0 134799999866532 11110 001112222 33456789887776654322 12245677777
Q ss_pred HHHhCCCeeEEEEEeccCCCCCCcccEEEEEEEcC
Q psy13720 365 CLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAP 399 (487)
Q Consensus 365 ~l~~~GY~~~~~~l~a~~yGvPQ~R~R~fiia~~~ 399 (487)
.|.+..-.+......--.| | .-.-.|++|++.
T Consensus 214 ~l~~~F~~v~~~~~~vp~~--p-~g~~~f~~as~~ 245 (294)
T 3adn_A 214 KLSHYFSDVGFYQAAIPTY--Y-GGIMTFAWATDN 245 (294)
T ss_dssp HHHHHCSEEEEEEEECTTS--S-SSEEEEEEEESC
T ss_pred HHHHHCCCeEEEEEEeccc--C-CCceEEEEEeCC
Confidence 7776644444433332223 0 134678888864
No 126
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=95.36 E-value=0.016 Score=55.57 Aligned_cols=55 Identities=16% Similarity=0.181 Sum_probs=45.0
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhC---CCCceeccchHH
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN---PGCTVFVDDCNK 272 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~---p~~~~~~~di~~ 272 (487)
..-++||+.||.|.++..|...|. -+.|+|+|+.+++..+.++ ++..++.+|+.+
T Consensus 29 ~~~~VLEIG~G~G~lt~~La~~~~--~V~avEid~~~~~~~~~~~~~~~~v~~i~~D~~~ 86 (255)
T 3tqs_A 29 KTDTLVEIGPGRGALTDYLLTECD--NLALVEIDRDLVAFLQKKYNQQKNITIYQNDALQ 86 (255)
T ss_dssp TTCEEEEECCTTTTTHHHHTTTSS--EEEEEECCHHHHHHHHHHHTTCTTEEEEESCTTT
T ss_pred CcCEEEEEcccccHHHHHHHHhCC--EEEEEECCHHHHHHHHHHHhhCCCcEEEEcchHh
Confidence 456899999999999999988873 6899999999999988876 345566777654
No 127
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=95.31 E-value=0.024 Score=55.01 Aligned_cols=149 Identities=11% Similarity=0.101 Sum_probs=88.1
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhC---------------CCCceeccchHHHHHHhhch
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN---------------PGCTVFVDDCNKILQRVIDN 280 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~---------------p~~~~~~~di~~~~~~~~~~ 280 (487)
...++|||.||.|+++.-+...|. ..+.++|+|+.+++.-+.|+ +...++.+|..+++..
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~-~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~---- 149 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQHDV-DEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN---- 149 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSCC-SEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH----
T ss_pred CCCeEEEEcCCcCHHHHHHHhCCC-CEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcc----
Confidence 345799999999999999877765 67899999999999888776 2234566676554311
Q ss_pred hhhccccccCCCCCcccEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhhcCCcEEEEecCcchhcccchhHHH
Q psy13720 281 EVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLK 360 (487)
Q Consensus 281 ~~~~~~~~~~p~~~~vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~~~P~~~ilENV~gl~~~~~~~~~~ 360 (487)
.+.+|+|+..+|+. ++... ......++.. +.+.++|.-+++=|..... .....+.
T Consensus 150 ------------~~~fD~Ii~d~~~~-~~~~~-------~l~~~~~l~~---~~~~L~pgG~lv~~~~~~~--~~~~~~~ 204 (281)
T 1mjf_A 150 ------------NRGFDVIIADSTDP-VGPAK-------VLFSEEFYRY---VYDALNNPGIYVTQAGSVY--LFTDELI 204 (281)
T ss_dssp ------------CCCEEEEEEECCCC-C------------TTSHHHHHH---HHHHEEEEEEEEEEEEETT--TSHHHHH
T ss_pred ------------cCCeeEEEECCCCC-CCcch-------hhhHHHHHHH---HHHhcCCCcEEEEEcCCcc--cCHHHHH
Confidence 13689999888863 22110 0001223333 3355688866655533221 1234566
Q ss_pred HHHHHHHhCCCeeEEEEEeccCCCCCCc-ccEEEEEEEcC
Q psy13720 361 MTMRCLTQIGYQCTFGTLQAGHFGVSQT-RRRAIVLAAAP 399 (487)
Q Consensus 361 ~i~~~l~~~GY~~~~~~l~a~~yGvPQ~-R~R~fiia~~~ 399 (487)
.+.+.+.+..=.+...... +|.- ..-.|++|++.
T Consensus 205 ~~~~~l~~~f~~v~~~~~~-----vP~~~g~~~~~~as~~ 239 (281)
T 1mjf_A 205 SAYKEMKKVFDRVYYYSFP-----VIGYASPWAFLVGVKG 239 (281)
T ss_dssp HHHHHHHHHCSEEEEEEEC-----CTTSSSSEEEEEEEES
T ss_pred HHHHHHHHHCCceEEEEEe-----cCCCCceEEEEEeeCC
Confidence 6777776552223222211 3332 44678888764
No 128
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=95.25 E-value=0.014 Score=56.79 Aligned_cols=72 Identities=24% Similarity=0.213 Sum_probs=53.7
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCC------CCceeccchHHHHHHhhchhhhcccccc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP------GCTVFVDDCNKILQRVIDNEVCDDKKQK 289 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p------~~~~~~~di~~~~~~~~~~~~~~~~~~~ 289 (487)
..-++||+-||.|.++..+...|. -+.++|+|+.+++..+.+.. ...++.+|+.++ .
T Consensus 28 ~~~~VLDiG~G~G~lt~~L~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~---------------~ 90 (285)
T 1zq9_A 28 PTDVVLEVGPGTGNMTVKLLEKAK--KVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKT---------------D 90 (285)
T ss_dssp TTCEEEEECCTTSTTHHHHHHHSS--EEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTS---------------C
T ss_pred CCCEEEEEcCcccHHHHHHHhhCC--EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecc---------------c
Confidence 456899999999999999988874 58899999999988887753 233444554321 1
Q ss_pred CCCCCcccEEEccCCCcC
Q psy13720 290 LPRKGEVEMLCGGPPCQG 307 (487)
Q Consensus 290 ~p~~~~vd~i~ggpPCq~ 307 (487)
++ .+|+|++.+|++.
T Consensus 91 ~~---~fD~vv~nlpy~~ 105 (285)
T 1zq9_A 91 LP---FFDTCVANLPYQI 105 (285)
T ss_dssp CC---CCSEEEEECCGGG
T ss_pred ch---hhcEEEEecCccc
Confidence 22 5899999999754
No 129
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=95.23 E-value=0.028 Score=54.12 Aligned_cols=72 Identities=13% Similarity=0.124 Sum_probs=53.8
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCC----CCceeccchHHHHHHhhchhhhccccccCC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP----GCTVFVDDCNKILQRVIDNEVCDDKKQKLP 291 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p----~~~~~~~di~~~~~~~~~~~~~~~~~~~~p 291 (487)
...++||+.||.|.++.-+...|. -+.++|+++.+++..+.+.. ...++.+|+.++ +
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~g~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~-----------------~ 180 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLLGY--DVTSWDHNENSIAFLNETKEKENLNISTALYDINAA-----------------N 180 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGC-----------------C
T ss_pred CCCcEEEECCCCCHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccc-----------------c
Confidence 567899999999999999999886 57899999998887776542 344555555421 2
Q ss_pred CCCcccEEEccCCCc
Q psy13720 292 RKGEVEMLCGGPPCQ 306 (487)
Q Consensus 292 ~~~~vd~i~ggpPCq 306 (487)
..+.+|+|+...+..
T Consensus 181 ~~~~fD~i~~~~~~~ 195 (286)
T 3m70_A 181 IQENYDFIVSTVVFM 195 (286)
T ss_dssp CCSCEEEEEECSSGG
T ss_pred ccCCccEEEEccchh
Confidence 245799999877543
No 130
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=95.13 E-value=0.018 Score=58.71 Aligned_cols=72 Identities=14% Similarity=0.223 Sum_probs=49.8
Q ss_pred CCCeEeecccCchHHHHHHhhcCCC--------------------------------------cEEEEEcCcHHHHHHHH
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVA--------------------------------------RSTWAIEFDSAAATAFK 257 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~--------------------------------------~~~~a~e~~~~a~~t~~ 257 (487)
..-+++|+|||.|++...+.+.+.. ..++++|+|+.+++.-+
T Consensus 195 ~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~Ar 274 (385)
T 3ldu_A 195 AGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIAR 274 (385)
T ss_dssp TTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHHH
T ss_pred CCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHHH
Confidence 4578999999999988766443210 24899999999999888
Q ss_pred HhCC------CCceeccchHHHHHHhhchhhhccccccCCCCCcccEEEccCC
Q psy13720 258 MNNP------GCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPP 304 (487)
Q Consensus 258 ~N~p------~~~~~~~di~~~~~~~~~~~~~~~~~~~~p~~~~vd~i~ggpP 304 (487)
.|.. ...+.++|+.+ ++..+.+|+|+.-||
T Consensus 275 ~Na~~~gl~~~i~~~~~D~~~-----------------l~~~~~~D~Iv~NPP 310 (385)
T 3ldu_A 275 ENAEIAGVDEYIEFNVGDATQ-----------------FKSEDEFGFIITNPP 310 (385)
T ss_dssp HHHHHHTCGGGEEEEECCGGG-----------------CCCSCBSCEEEECCC
T ss_pred HHHHHcCCCCceEEEECChhh-----------------cCcCCCCcEEEECCC
Confidence 7742 12233444332 223357899999999
No 131
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=95.03 E-value=0.028 Score=52.13 Aligned_cols=73 Identities=8% Similarity=0.004 Sum_probs=53.7
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCCC---CceeccchHHHHHHhhchhhhccccccCCC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPG---CTVFVDDCNKILQRVIDNEVCDDKKQKLPR 292 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p~---~~~~~~di~~~~~~~~~~~~~~~~~~~~p~ 292 (487)
...++||+.||.|.++.-+...| ..+.++|+++.+++..+.+... ..+..+|+.+ .++.
T Consensus 70 ~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~----------------~~~~ 131 (231)
T 1vbf_A 70 KGQKVLEIGTGIGYYTALIAEIV--DKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTL----------------GYEE 131 (231)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGG----------------CCGG
T ss_pred CCCEEEEEcCCCCHHHHHHHHHc--CEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCccc----------------cccc
Confidence 45689999999999999998887 3688999999999988887653 3445555432 1122
Q ss_pred CCcccEEEccCCCc
Q psy13720 293 KGEVEMLCGGPPCQ 306 (487)
Q Consensus 293 ~~~vd~i~ggpPCq 306 (487)
.+.+|+|+...++.
T Consensus 132 ~~~fD~v~~~~~~~ 145 (231)
T 1vbf_A 132 EKPYDRVVVWATAP 145 (231)
T ss_dssp GCCEEEEEESSBBS
T ss_pred CCCccEEEECCcHH
Confidence 34689999876654
No 132
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=94.95 E-value=0.039 Score=49.03 Aligned_cols=71 Identities=18% Similarity=0.143 Sum_probs=51.1
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCC-----C--CceeccchHHHHHHhhchhhhccccc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP-----G--CTVFVDDCNKILQRVIDNEVCDDKKQ 288 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p-----~--~~~~~~di~~~~~~~~~~~~~~~~~~ 288 (487)
...++||+.||.|.++.-+...+. .+.++|+++.+++..+.|.. + ..+...|+.+.
T Consensus 52 ~~~~vLdiG~G~G~~~~~~~~~~~--~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~--------------- 114 (194)
T 1dus_A 52 KDDDILDLGCGYGVIGIALADEVK--STTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYEN--------------- 114 (194)
T ss_dssp TTCEEEEETCTTSHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTT---------------
T ss_pred CCCeEEEeCCCCCHHHHHHHHcCC--eEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcc---------------
Confidence 456899999999999999888753 68999999999888776642 2 34444454321
Q ss_pred cCCCCCcccEEEccCCC
Q psy13720 289 KLPRKGEVEMLCGGPPC 305 (487)
Q Consensus 289 ~~p~~~~vd~i~ggpPC 305 (487)
++ .+.+|+|+..+|-
T Consensus 115 -~~-~~~~D~v~~~~~~ 129 (194)
T 1dus_A 115 -VK-DRKYNKIITNPPI 129 (194)
T ss_dssp -CT-TSCEEEEEECCCS
T ss_pred -cc-cCCceEEEECCCc
Confidence 11 3479999987764
No 133
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=94.95 E-value=0.017 Score=58.69 Aligned_cols=74 Identities=11% Similarity=0.153 Sum_probs=51.7
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCCC--------CceeccchHHHHHHhhchhhhcccc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPG--------CTVFVDDCNKILQRVIDNEVCDDKK 287 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p~--------~~~~~~di~~~~~~~~~~~~~~~~~ 287 (487)
..-+++||+||.|.++.-+...+-...+.++|+++.+++.-+.|... ..++.+|+.+
T Consensus 222 ~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~--------------- 286 (375)
T 4dcm_A 222 LEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS--------------- 286 (375)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT---------------
T ss_pred CCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc---------------
Confidence 34789999999999999998874214689999999999888776532 1113333211
Q ss_pred ccCCCCCcccEEEccCCCc
Q psy13720 288 QKLPRKGEVEMLCGGPPCQ 306 (487)
Q Consensus 288 ~~~p~~~~vd~i~ggpPCq 306 (487)
.++ .+.+|+|+..||..
T Consensus 287 -~~~-~~~fD~Ii~nppfh 303 (375)
T 4dcm_A 287 -GVE-PFRFNAVLCNPPFH 303 (375)
T ss_dssp -TCC-TTCEEEEEECCCC-
T ss_pred -cCC-CCCeeEEEECCCcc
Confidence 122 35799999999963
No 134
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=94.95 E-value=0.03 Score=57.01 Aligned_cols=73 Identities=12% Similarity=0.139 Sum_probs=50.0
Q ss_pred CCCeEeecccCchHHHHHHhhcCCC--------------------------------------cEEEEEcCcHHHHHHHH
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVA--------------------------------------RSTWAIEFDSAAATAFK 257 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~--------------------------------------~~~~a~e~~~~a~~t~~ 257 (487)
..-.++|.|||.|++..-..+.+.. -.++++|+|+.|++.-+
T Consensus 194 ~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~Ar 273 (384)
T 3ldg_A 194 PDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIAR 273 (384)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHH
T ss_pred CCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHHH
Confidence 4567999999999987655432220 13899999999999988
Q ss_pred HhCC-----C-CceeccchHHHHHHhhchhhhccccccCCCCCcccEEEccCCC
Q psy13720 258 MNNP-----G-CTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPC 305 (487)
Q Consensus 258 ~N~p-----~-~~~~~~di~~~~~~~~~~~~~~~~~~~~p~~~~vd~i~ggpPC 305 (487)
.|.. + ..+.++|+.+ ++..+.+|+|+.-||-
T Consensus 274 ~Na~~~gl~~~I~~~~~D~~~-----------------l~~~~~fD~Iv~NPPY 310 (384)
T 3ldg_A 274 KNAREVGLEDVVKLKQMRLQD-----------------FKTNKINGVLISNPPY 310 (384)
T ss_dssp HHHHHTTCTTTEEEEECCGGG-----------------CCCCCCSCEEEECCCC
T ss_pred HHHHHcCCCCceEEEECChHH-----------------CCccCCcCEEEECCch
Confidence 8742 1 2344445432 2223479999999995
No 135
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=94.93 E-value=0.042 Score=50.13 Aligned_cols=73 Identities=11% Similarity=-0.035 Sum_probs=52.2
Q ss_pred CCCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhC-----CCCceeccchHHHHHHhhchhhhcccccc
Q psy13720 215 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN-----PGCTVFVDDCNKILQRVIDNEVCDDKKQK 289 (487)
Q Consensus 215 ~~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~-----p~~~~~~~di~~~~~~~~~~~~~~~~~~~ 289 (487)
++..++||+.||.|.++.-+...|. .++++|+++.+++.-+.|. ++..+..+|+.+.
T Consensus 76 ~~~~~vLdiG~G~G~~~~~la~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~---------------- 137 (210)
T 3lbf_A 76 TPQSRVLEIGTGSGYQTAILAHLVQ--HVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQG---------------- 137 (210)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHSS--EEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC----------------
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCC--EEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccC----------------
Confidence 3567899999999999999888763 6899999999888777663 2344555554321
Q ss_pred CCCCCcccEEEccCCC
Q psy13720 290 LPRKGEVEMLCGGPPC 305 (487)
Q Consensus 290 ~p~~~~vd~i~ggpPC 305 (487)
.+..+.+|+|+....+
T Consensus 138 ~~~~~~~D~i~~~~~~ 153 (210)
T 3lbf_A 138 WQARAPFDAIIVTAAP 153 (210)
T ss_dssp CGGGCCEEEEEESSBC
T ss_pred CccCCCccEEEEccch
Confidence 1123478999887544
No 136
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=94.89 E-value=0.042 Score=50.52 Aligned_cols=70 Identities=14% Similarity=0.209 Sum_probs=52.0
Q ss_pred CCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhC----CCCceeccchHHHHHHhhchhhhccccccCCC
Q psy13720 217 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN----PGCTVFVDDCNKILQRVIDNEVCDDKKQKLPR 292 (487)
Q Consensus 217 ~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~----p~~~~~~~di~~~~~~~~~~~~~~~~~~~~p~ 292 (487)
..++||+.||.|.++.-+...|. .+.++|+++.+++..+.+. ++..+..+|+.++ .++
T Consensus 39 ~~~vLDlG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~---------------~~~- 100 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLLEDYGF--EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKL---------------SFE- 100 (227)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSC---------------CSC-
T ss_pred CCeEEEEeccCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcC---------------CCC-
Confidence 56899999999999999988885 6789999999888776654 4555666665321 111
Q ss_pred CCcccEEEccCC
Q psy13720 293 KGEVEMLCGGPP 304 (487)
Q Consensus 293 ~~~vd~i~ggpP 304 (487)
.+.+|+|+..++
T Consensus 101 ~~~~D~v~~~~~ 112 (227)
T 1ve3_A 101 DKTFDYVIFIDS 112 (227)
T ss_dssp TTCEEEEEEESC
T ss_pred CCcEEEEEEcCc
Confidence 347999987765
No 137
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=94.85 E-value=0.061 Score=50.92 Aligned_cols=101 Identities=16% Similarity=0.111 Sum_probs=66.5
Q ss_pred CCCCeEeecccCchHHHHHHhhc---CCCcEEEEEcCcHHHHHHHHHhC-----C-CCceeccchHHHHHHhhchhhhcc
Q psy13720 215 ARPLRCLEVFAGAGGLSRGLDKS---GVARSTWAIEFDSAAATAFKMNN-----P-GCTVFVDDCNKILQRVIDNEVCDD 285 (487)
Q Consensus 215 ~~~l~~ldLFsG~Gg~s~Gl~~a---G~~~~~~a~e~~~~a~~t~~~N~-----p-~~~~~~~di~~~~~~~~~~~~~~~ 285 (487)
.+..++||+.||.|+.+.-+..+ + ..+.++|+++.+++.-+.|+ . ...+..+|+.+.+..
T Consensus 62 ~~~~~VLdiG~G~G~~~~~la~~~~~~--~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~--------- 130 (248)
T 3tfw_A 62 TQAKRILEIGTLGGYSTIWMARELPAD--GQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLES--------- 130 (248)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTSCTT--CEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHT---------
T ss_pred cCCCEEEEecCCchHHHHHHHHhCCCC--CEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHh---------
Confidence 35678999999999999998776 4 36899999999888777664 1 355677887765321
Q ss_pred ccccCCCCCcccEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhhcCCc-EEEEecCc
Q psy13720 286 KKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPR-FFLLENVR 348 (487)
Q Consensus 286 ~~~~~p~~~~vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~~~P~-~~ilENV~ 348 (487)
++..+.+|+|+...++.. ...++.. +.+.++|. ++++.||-
T Consensus 131 ----~~~~~~fD~V~~d~~~~~---------------~~~~l~~---~~~~LkpGG~lv~~~~~ 172 (248)
T 3tfw_A 131 ----LGECPAFDLIFIDADKPN---------------NPHYLRW---ALRYSRPGTLIIGDNVV 172 (248)
T ss_dssp ----CCSCCCCSEEEECSCGGG---------------HHHHHHH---HHHTCCTTCEEEEECCS
T ss_pred ----cCCCCCeEEEEECCchHH---------------HHHHHHH---HHHhcCCCeEEEEeCCC
Confidence 122347899987543111 0112332 34556775 67788884
No 138
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=94.73 E-value=0.018 Score=56.43 Aligned_cols=72 Identities=21% Similarity=0.239 Sum_probs=53.9
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhC---CCCceeccchHHHHHHhhchhhhccccccCCC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN---PGCTVFVDDCNKILQRVIDNEVCDDKKQKLPR 292 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~---p~~~~~~~di~~~~~~~~~~~~~~~~~~~~p~ 292 (487)
..-++||+-||.|.++..|...+. -+.|+|+|+..++..+.++ ++..++++|+.++ .++
T Consensus 50 ~~~~VLEIG~G~G~lT~~La~~~~--~V~aVEid~~li~~a~~~~~~~~~v~vi~gD~l~~---------------~~~- 111 (295)
T 3gru_A 50 KDDVVLEIGLGKGILTEELAKNAK--KVYVIEIDKSLEPYANKLKELYNNIEIIWGDALKV---------------DLN- 111 (295)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHSS--EEEEEESCGGGHHHHHHHHHHCSSEEEEESCTTTS---------------CGG-
T ss_pred CcCEEEEECCCchHHHHHHHhcCC--EEEEEECCHHHHHHHHHHhccCCCeEEEECchhhC---------------Ccc-
Confidence 456899999999999999988763 6789999998888777764 5666777776532 011
Q ss_pred CCcccEEEccCCC
Q psy13720 293 KGEVEMLCGGPPC 305 (487)
Q Consensus 293 ~~~vd~i~ggpPC 305 (487)
...+|+|++.+|-
T Consensus 112 ~~~fD~Iv~NlPy 124 (295)
T 3gru_A 112 KLDFNKVVANLPY 124 (295)
T ss_dssp GSCCSEEEEECCG
T ss_pred cCCccEEEEeCcc
Confidence 1247899988873
No 139
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=94.71 E-value=0.15 Score=46.93 Aligned_cols=102 Identities=16% Similarity=0.073 Sum_probs=66.4
Q ss_pred CCCeEeecccCchHHHHHHhhc---CCCcEEEEEcCcHHHHHHHHHhCC------CCceeccchHHHHHHhhchhhhccc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKS---GVARSTWAIEFDSAAATAFKMNNP------GCTVFVDDCNKILQRVIDNEVCDDK 286 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~a---G~~~~~~a~e~~~~a~~t~~~N~p------~~~~~~~di~~~~~~~~~~~~~~~~ 286 (487)
+..++||+.||.|+.+.-+..+ |. .+.++|+++.+++.-+.|+. ...++.+|+.+.+.....
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~------- 128 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLARGLSSGG--RVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIEN------- 128 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCSSC--EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHH-------
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCC--EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHh-------
Confidence 5678999999999999998876 53 68999999998887776642 255677888765432210
Q ss_pred cccCCCCCcccEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhhcCCc-EEEEecCc
Q psy13720 287 KQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPR-FFLLENVR 348 (487)
Q Consensus 287 ~~~~p~~~~vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~~~P~-~~ilENV~ 348 (487)
. ..+.+|+|+...++.. ...++.. +.+.++|. .+++.|+.
T Consensus 129 --~--~~~~fD~v~~d~~~~~---------------~~~~l~~---~~~~L~pgG~lv~~~~~ 169 (223)
T 3duw_A 129 --E--KYEPFDFIFIDADKQN---------------NPAYFEW---ALKLSRPGTVIIGDNVV 169 (223)
T ss_dssp --T--TCCCCSEEEECSCGGG---------------HHHHHHH---HHHTCCTTCEEEEESCS
T ss_pred --c--CCCCcCEEEEcCCcHH---------------HHHHHHH---HHHhcCCCcEEEEeCCC
Confidence 0 0135899987655320 0122333 33556775 67778874
No 140
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=94.59 E-value=0.11 Score=48.72 Aligned_cols=117 Identities=15% Similarity=0.125 Sum_probs=72.8
Q ss_pred CCCCeEeecccCchHHHHHHhhc-CCCcEEEEEcCcHHHHHHHHHhC------CCCceeccchHHHHHHhhchhhhcccc
Q psy13720 215 ARPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMNN------PGCTVFVDDCNKILQRVIDNEVCDDKK 287 (487)
Q Consensus 215 ~~~l~~ldLFsG~Gg~s~Gl~~a-G~~~~~~a~e~~~~a~~t~~~N~------p~~~~~~~di~~~~~~~~~~~~~~~~~ 287 (487)
...-++||+.||.|.++.-+... |-...+.++|+++.+++..+.|. +...+..+|+.+.
T Consensus 95 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~-------------- 160 (258)
T 2pwy_A 95 APGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEA-------------- 160 (258)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGC--------------
T ss_pred CCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhc--------------
Confidence 35568999999999999998876 41146899999999888777663 2334455554321
Q ss_pred ccCCCCCcccEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhhcCCcEEEEecCcchhcccchhHHHHHHHHHH
Q psy13720 288 QKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLT 367 (487)
Q Consensus 288 ~~~p~~~~vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~~~P~~~ilENV~gl~~~~~~~~~~~i~~~l~ 367 (487)
.++ .+.+|+|+..+|.. ..++.+.. +.++|.-.++=.++.. ..+..++..|.
T Consensus 161 -~~~-~~~~D~v~~~~~~~-----------------~~~l~~~~---~~L~~gG~l~~~~~~~------~~~~~~~~~l~ 212 (258)
T 2pwy_A 161 -ELE-EAAYDGVALDLMEP-----------------WKVLEKAA---LALKPDRFLVAYLPNI------TQVLELVRAAE 212 (258)
T ss_dssp -CCC-TTCEEEEEEESSCG-----------------GGGHHHHH---HHEEEEEEEEEEESCH------HHHHHHHHHHT
T ss_pred -CCC-CCCcCEEEECCcCH-----------------HHHHHHHH---HhCCCCCEEEEEeCCH------HHHHHHHHHHH
Confidence 122 24689998755421 12344433 4456754333222221 23567788888
Q ss_pred hCCCee
Q psy13720 368 QIGYQC 373 (487)
Q Consensus 368 ~~GY~~ 373 (487)
+.||..
T Consensus 213 ~~gf~~ 218 (258)
T 2pwy_A 213 AHPFRL 218 (258)
T ss_dssp TTTEEE
T ss_pred HCCCce
Confidence 899874
No 141
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=94.55 E-value=0.085 Score=53.33 Aligned_cols=69 Identities=22% Similarity=0.238 Sum_probs=49.5
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhC----C-C-CceeccchHHHHHHhhchhhhcccccc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN----P-G-CTVFVDDCNKILQRVIDNEVCDDKKQK 289 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~----p-~-~~~~~~di~~~~~~~~~~~~~~~~~~~ 289 (487)
+..++|||.||.|.++.-+..+|. .-+.++|++ .+++..+.+. - + ..++.+|+.++ .
T Consensus 63 ~~~~VLDlGcGtG~ls~~la~~g~-~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---------------~ 125 (376)
T 3r0q_C 63 EGKTVLDVGTGSGILAIWSAQAGA-RKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDI---------------S 125 (376)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTTC-SEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGC---------------C
T ss_pred CCCEEEEeccCcCHHHHHHHhcCC-CEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhc---------------C
Confidence 567899999999999999999996 688999999 6555444432 1 1 45566665432 1
Q ss_pred CCCCCcccEEEccC
Q psy13720 290 LPRKGEVEMLCGGP 303 (487)
Q Consensus 290 ~p~~~~vd~i~ggp 303 (487)
+| +.+|+|+..+
T Consensus 126 ~~--~~~D~Iv~~~ 137 (376)
T 3r0q_C 126 LP--EKVDVIISEW 137 (376)
T ss_dssp CS--SCEEEEEECC
T ss_pred cC--CcceEEEEcC
Confidence 22 6899999754
No 142
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=94.50 E-value=0.033 Score=53.13 Aligned_cols=55 Identities=24% Similarity=0.312 Sum_probs=44.0
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCCC--CceeccchHH
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPG--CTVFVDDCNK 272 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p~--~~~~~~di~~ 272 (487)
..-++||+.||.|.++.-+...|. .-+.|+|+|+.+++..+.| +. ..++++|+.+
T Consensus 31 ~~~~VLDiG~G~G~lt~~L~~~~~-~~v~avEid~~~~~~~~~~-~~~~v~~i~~D~~~ 87 (249)
T 3ftd_A 31 EGNTVVEVGGGTGNLTKVLLQHPL-KKLYVIELDREMVENLKSI-GDERLEVINEDASK 87 (249)
T ss_dssp TTCEEEEEESCHHHHHHHHTTSCC-SEEEEECCCHHHHHHHTTS-CCTTEEEECSCTTT
T ss_pred CcCEEEEEcCchHHHHHHHHHcCC-CeEEEEECCHHHHHHHHhc-cCCCeEEEEcchhh
Confidence 456799999999999999988874 5789999999999988877 32 3456666543
No 143
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=94.50 E-value=0.31 Score=42.56 Aligned_cols=120 Identities=9% Similarity=-0.002 Sum_probs=69.9
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCCC-----CceeccchHHHHHHhhchhhhccccccC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPG-----CTVFVDDCNKILQRVIDNEVCDDKKQKL 290 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p~-----~~~~~~di~~~~~~~~~~~~~~~~~~~~ 290 (487)
...++||+.||.|.++.-+....-...+.++|+++.+++.-+.|... ...+.+|..+ .+
T Consensus 25 ~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~----------------~~ 88 (178)
T 3hm2_A 25 PHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRIAVQQGAPR----------------AF 88 (178)
T ss_dssp TTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTG----------------GG
T ss_pred CCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHh----------------hh
Confidence 55689999999999999887662114678999999988887766321 1134444321 11
Q ss_pred CCC-CcccEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhhcCCcEEEEecCcchhcccchhHHHHHHHHHHhC
Q psy13720 291 PRK-GEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQI 369 (487)
Q Consensus 291 p~~-~~vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~~~P~~~ilENV~gl~~~~~~~~~~~i~~~l~~~ 369 (487)
+.. +.+|+|+.+.+... ..++.++ .+.++|.-.++=+.... .....+...+...
T Consensus 89 ~~~~~~~D~i~~~~~~~~----------------~~~l~~~---~~~L~~gG~l~~~~~~~------~~~~~~~~~~~~~ 143 (178)
T 3hm2_A 89 DDVPDNPDVIFIGGGLTA----------------PGVFAAA---WKRLPVGGRLVANAVTV------ESEQMLWALRKQF 143 (178)
T ss_dssp GGCCSCCSEEEECC-TTC----------------TTHHHHH---HHTCCTTCEEEEEECSH------HHHHHHHHHHHHH
T ss_pred hccCCCCCEEEECCcccH----------------HHHHHHH---HHhcCCCCEEEEEeecc------ccHHHHHHHHHHc
Confidence 211 47899985544311 1234443 34567754443222111 2345666777778
Q ss_pred CCeeEEE
Q psy13720 370 GYQCTFG 376 (487)
Q Consensus 370 GY~~~~~ 376 (487)
|+.+...
T Consensus 144 ~~~~~~~ 150 (178)
T 3hm2_A 144 GGTISSF 150 (178)
T ss_dssp CCEEEEE
T ss_pred CCeeEEE
Confidence 8776543
No 144
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=94.45 E-value=0.41 Score=45.06 Aligned_cols=150 Identities=13% Similarity=0.059 Sum_probs=86.6
Q ss_pred CcCCCCeEeecccCchHHHHHHhhc-CCCcEEEEEcCcHHHHHHHHHhCCC---CceeccchHHHHHHhhchhhhccccc
Q psy13720 213 SIARPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMNNPG---CTVFVDDCNKILQRVIDNEVCDDKKQ 288 (487)
Q Consensus 213 ~~~~~l~~ldLFsG~Gg~s~Gl~~a-G~~~~~~a~e~~~~a~~t~~~N~p~---~~~~~~di~~~~~~~~~~~~~~~~~~ 288 (487)
.+++.-++|||-||.|.++.-+... |-.-.++|+|+++..++..+.+... ...+.+|..... .
T Consensus 74 ~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~-------------~ 140 (233)
T 4df3_A 74 PVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPE-------------K 140 (233)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGG-------------G
T ss_pred CCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCcc-------------c
Confidence 4567789999999999999888753 4323689999999999888877533 334444443210 0
Q ss_pred cCCCCCcccEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhhcCCcE--EEEecCcchhc-ccchhHHHHHHHH
Q psy13720 289 KLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRF--FLLENVRNFVA-FKNSMVLKMTMRC 365 (487)
Q Consensus 289 ~~p~~~~vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~~~P~~--~ilENV~gl~~-~~~~~~~~~i~~~ 365 (487)
.....+.+|+|+.-.+.. .+ ....+.+ +...++|.- ++.......-. ......++..++.
T Consensus 141 ~~~~~~~vDvVf~d~~~~-------------~~-~~~~l~~---~~r~LKpGG~lvI~ik~r~~d~~~p~~~~~~~ev~~ 203 (233)
T 4df3_A 141 YRHLVEGVDGLYADVAQP-------------EQ-AAIVVRN---ARFFLRDGGYMLMAIKARSIDVTTEPSEVYKREIKT 203 (233)
T ss_dssp GTTTCCCEEEEEECCCCT-------------TH-HHHHHHH---HHHHEEEEEEEEEEEECCHHHHHTCCCHHHHHHHHH
T ss_pred cccccceEEEEEEeccCC-------------hh-HHHHHHH---HHHhccCCCEEEEEEecccCCCCCChHHHHHHHHHH
Confidence 011234789887544321 11 1122333 345567753 33333332221 1223467788899
Q ss_pred HHhCCCeeEEEEEeccCCCCCCcccEEEEEEE
Q psy13720 366 LTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAA 397 (487)
Q Consensus 366 l~~~GY~~~~~~l~a~~yGvPQ~R~R~fiia~ 397 (487)
|.+.||.+...+ +- .|-.|.-+.++|.
T Consensus 204 L~~~GF~l~e~i-~L----~pf~~~H~lv~~~ 230 (233)
T 4df3_A 204 LMDGGLEIKDVV-HL----DPFDRDHAMIYAV 230 (233)
T ss_dssp HHHTTCCEEEEE-EC----TTTSTTEEEEEEC
T ss_pred HHHCCCEEEEEE-cc----CCCCCceEEEEEE
Confidence 999999875543 22 2333455666653
No 145
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=94.42 E-value=0.1 Score=51.21 Aligned_cols=153 Identities=14% Similarity=0.097 Sum_probs=83.9
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCC---------CCceeccchHHHHHHhhchhhhccc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP---------GCTVFVDDCNKILQRVIDNEVCDDK 286 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p---------~~~~~~~di~~~~~~~~~~~~~~~~ 286 (487)
..-++|||.||.|+++.-+...+-...+.++|+|+.+++.-+.|++ ...++.+|..+++..
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~---------- 164 (304)
T 2o07_A 95 NPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQ---------- 164 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHT----------
T ss_pred CCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhh----------
Confidence 3458999999999999998766322578999999999988887753 345677787665321
Q ss_pred cccCCCCCcccEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhhcCCcEEEEecCcchhcccchhHHHHHHHHH
Q psy13720 287 KQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCL 366 (487)
Q Consensus 287 ~~~~p~~~~vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~~~P~~~ilENV~gl~~~~~~~~~~~i~~~l 366 (487)
..+.+|+|+..+|... .... ......++.. +.+.++|.-+++=|..... ......+.+.+.+
T Consensus 165 -----~~~~fD~Ii~d~~~~~-~~~~-------~l~~~~~l~~---~~~~LkpgG~lv~~~~~~~--~~~~~~~~~~~~l 226 (304)
T 2o07_A 165 -----NQDAFDVIITDSSDPM-GPAE-------SLFKESYYQL---MKTALKEDGVLCCQGECQW--LHLDLIKEMRQFC 226 (304)
T ss_dssp -----CSSCEEEEEEECC-------------------CHHHHH---HHHHEEEEEEEEEEEECTT--TCHHHHHHHHHHH
T ss_pred -----CCCCceEEEECCCCCC-Ccch-------hhhHHHHHHH---HHhccCCCeEEEEecCCcc--cchHHHHHHHHHH
Confidence 1246899998766321 1100 0111123333 3455688865553332211 1223445555555
Q ss_pred HhCCCeeEEEEEeccCCCCCCcccEEEEEEEcC
Q psy13720 367 TQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAP 399 (487)
Q Consensus 367 ~~~GY~~~~~~l~a~~yGvPQ~R~R~fiia~~~ 399 (487)
.+.-=.+......--.|. .-.--|++|++.
T Consensus 227 ~~~f~~v~~~~~~vP~~~---~g~~g~~~as~~ 256 (304)
T 2o07_A 227 QSLFPVVAYAYCTIPTYP---SGQIGFMLCSKN 256 (304)
T ss_dssp HHHCSEEEEEEEECTTSG---GGEEEEEEEESS
T ss_pred HHhCCCceeEEEEecccc---CcceEEEEEeCC
Confidence 543223333322222231 124557787754
No 146
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=94.39 E-value=0.069 Score=49.43 Aligned_cols=54 Identities=20% Similarity=0.185 Sum_probs=45.9
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCCCCceeccchH
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCN 271 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p~~~~~~~di~ 271 (487)
+..++||+-||.|.++.-+...|. .+.++|+++.+++..+.+.++.....+|+.
T Consensus 40 ~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~ 93 (239)
T 3bxo_A 40 EASSLLDVACGTGTHLEHFTKEFG--DTAGLELSEDMLTHARKRLPDATLHQGDMR 93 (239)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHHS--EEEEEESCHHHHHHHHHHCTTCEEEECCTT
T ss_pred CCCeEEEecccCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhCCCCEEEECCHH
Confidence 456899999999999999988874 678999999999999988877777777654
No 147
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=94.37 E-value=0.51 Score=44.38 Aligned_cols=150 Identities=12% Similarity=0.110 Sum_probs=83.9
Q ss_pred cCCCCeEeecccCchHHHHHHhhc-CCCcEEEEEcCcHHHHHHHH---HhCCCCceeccchHHHHHHhhchhhhcccccc
Q psy13720 214 IARPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFK---MNNPGCTVFVDDCNKILQRVIDNEVCDDKKQK 289 (487)
Q Consensus 214 ~~~~l~~ldLFsG~Gg~s~Gl~~a-G~~~~~~a~e~~~~a~~t~~---~N~p~~~~~~~di~~~~~~~~~~~~~~~~~~~ 289 (487)
+++.-++|||.||.|+++.-+... |-.-.++|+|+++..++.+. ...++...+.+|+.... ....
T Consensus 74 l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~-----------~~~~ 142 (232)
T 3id6_C 74 IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQ-----------SYKS 142 (232)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGG-----------GTTT
T ss_pred CCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccch-----------hhhc
Confidence 346678999999999998777542 31126899999997654332 22345556666754210 0011
Q ss_pred CCCCCcccEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhh-hcCCcEEEEecCc--chh-cccchhHHHHHHHH
Q psy13720 290 LPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCD-YYRPRFFLLENVR--NFV-AFKNSMVLKMTMRC 365 (487)
Q Consensus 290 ~p~~~~vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~-~~~P~~~ilENV~--gl~-~~~~~~~~~~i~~~ 365 (487)
+ .+.+|+|+...+- .+....|. ..+. .++|.-.++=-++ -+- +......+...+..
T Consensus 143 ~--~~~~D~I~~d~a~--------------~~~~~il~----~~~~~~LkpGG~lvisik~~~~d~t~~~~e~~~~~~~~ 202 (232)
T 3id6_C 143 V--VENVDVLYVDIAQ--------------PDQTDIAI----YNAKFFLKVNGDMLLVIKARSIDVTKDPKEIYKTEVEK 202 (232)
T ss_dssp T--CCCEEEEEECCCC--------------TTHHHHHH----HHHHHHEEEEEEEEEEEC-------CCSSSSTTHHHHH
T ss_pred c--ccceEEEEecCCC--------------hhHHHHHH----HHHHHhCCCCeEEEEEEccCCcccCCCHHHHHHHHHHH
Confidence 1 2478998865431 11111122 2223 5677543331121 110 11122456778888
Q ss_pred HHhCCCeeEEEEEeccCCCCCCcccEEEEEEEcC
Q psy13720 366 LTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAP 399 (487)
Q Consensus 366 l~~~GY~~~~~~l~a~~yGvPQ~R~R~fiia~~~ 399 (487)
|.+.||.+...+ +- -|..|.-++++|.++
T Consensus 203 L~~~gf~~~~~~-~l----~p~~~~h~~v~~~~~ 231 (232)
T 3id6_C 203 LENSNFETIQII-NL----DPYDKDHAIVLSKYK 231 (232)
T ss_dssp HHHTTEEEEEEE-EC----TTTCSSCEEEEEEEC
T ss_pred HHHCCCEEEEEe-cc----CCCcCceEEEEEEeC
Confidence 888998876554 22 477788888888754
No 148
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=94.29 E-value=0.07 Score=49.24 Aligned_cols=74 Identities=15% Similarity=0.152 Sum_probs=50.7
Q ss_pred CCCeEeecccCchHHHHHHhhc-CCCcEEEEEcCcHHHHHHHHHhCC----------CCceeccchHHHHHHhhchhhhc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMNNP----------GCTVFVDDCNKILQRVIDNEVCD 284 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~a-G~~~~~~a~e~~~~a~~t~~~N~p----------~~~~~~~di~~~~~~~~~~~~~~ 284 (487)
...++||+.||.|+++.-+... |....+.++|+++.+++..+.|.. +..+...|+...
T Consensus 77 ~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~----------- 145 (226)
T 1i1n_A 77 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMG----------- 145 (226)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGC-----------
T ss_pred CCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccC-----------
Confidence 5568999999999999888654 431268999999998887766532 233444443211
Q ss_pred cccccCCCCCcccEEEccCCC
Q psy13720 285 DKKQKLPRKGEVEMLCGGPPC 305 (487)
Q Consensus 285 ~~~~~~p~~~~vd~i~ggpPC 305 (487)
.+..+.+|+|+...+|
T Consensus 146 -----~~~~~~fD~i~~~~~~ 161 (226)
T 1i1n_A 146 -----YAEEAPYDAIHVGAAA 161 (226)
T ss_dssp -----CGGGCCEEEEEECSBB
T ss_pred -----cccCCCcCEEEECCch
Confidence 1123468999988888
No 149
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=94.22 E-value=0.062 Score=51.24 Aligned_cols=43 Identities=14% Similarity=0.158 Sum_probs=37.6
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN 260 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~ 260 (487)
...++||+-||.|..+.-|...|+ -|.++|+++.+++..+.++
T Consensus 68 ~~~~vLD~GCG~G~~~~~La~~G~--~V~gvD~S~~~i~~a~~~~ 110 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFADRGH--TVVGVEISEIGIREFFAEQ 110 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHHHTTC--EEEEECSCHHHHHHHHHHT
T ss_pred CCCeEEEeCCCCcHHHHHHHHCCC--eEEEEECCHHHHHHHHHhc
Confidence 557899999999999999999997 5889999999999876654
No 150
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=94.18 E-value=0.067 Score=50.81 Aligned_cols=75 Identities=19% Similarity=0.241 Sum_probs=54.0
Q ss_pred cCCCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhC------CCCceeccchHHHHHHhhchhhhcccc
Q psy13720 214 IARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN------PGCTVFVDDCNKILQRVIDNEVCDDKK 287 (487)
Q Consensus 214 ~~~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~------p~~~~~~~di~~~~~~~~~~~~~~~~~ 287 (487)
+++..++||+-||.|.++.-+...+. ..+.++|+++.+++..+.+. +...+..+|+.+
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--------------- 107 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGHVT-GQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDD--------------- 107 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTTCS-SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTS---------------
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhccC-CEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhh---------------
Confidence 34667899999999999999988764 47899999999888777654 224455555432
Q ss_pred ccCC-CCCcccEEEccCCCc
Q psy13720 288 QKLP-RKGEVEMLCGGPPCQ 306 (487)
Q Consensus 288 ~~~p-~~~~vd~i~ggpPCq 306 (487)
+| ..+.+|+|+......
T Consensus 108 --~~~~~~~fD~i~~~~~~~ 125 (267)
T 3kkz_A 108 --LPFRNEELDLIWSEGAIY 125 (267)
T ss_dssp --CCCCTTCEEEEEESSCGG
T ss_pred --CCCCCCCEEEEEEcCCce
Confidence 22 235799999766543
No 151
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=94.09 E-value=0.14 Score=50.34 Aligned_cols=154 Identities=14% Similarity=0.086 Sum_probs=89.8
Q ss_pred CCCeEeecccCchHHHHHHhhc-CCCcEEEEEcCcHHHHHHHHHhCC----------CCceeccchHHHHHHhhchhhhc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMNNP----------GCTVFVDDCNKILQRVIDNEVCD 284 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~a-G~~~~~~a~e~~~~a~~t~~~N~p----------~~~~~~~di~~~~~~~~~~~~~~ 284 (487)
.+.++|||-||.|+++.-+... +. .-+.++|+|+.+++.-+.|++ ...++.+|+.+++..
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~-~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~-------- 147 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTV-EKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLER-------- 147 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTC-CEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHH--------
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCC-CEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHh--------
Confidence 3458999999999999988765 33 578999999999888777653 345677887765321
Q ss_pred cccccCCCCCcccEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhhcCCcEEEEecCcchhcccchhHHHHHHH
Q psy13720 285 DKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMR 364 (487)
Q Consensus 285 ~~~~~~p~~~~vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~~~P~~~ilENV~gl~~~~~~~~~~~i~~ 364 (487)
..+.+|+|+..++... ...+ .........++. .+.+.++|.-+++=|...... .....+..+.+
T Consensus 148 -------~~~~fD~Ii~d~~~~~-~~~~----~~~~l~~~~~l~---~~~~~LkpgG~lv~~~~~~~~-~~~~~~~~~~~ 211 (314)
T 1uir_A 148 -------TEERYDVVIIDLTDPV-GEDN----PARLLYTVEFYR---LVKAHLNPGGVMGMQTGMILL-THHRVHPVVHR 211 (314)
T ss_dssp -------CCCCEEEEEEECCCCB-STTC----GGGGGSSHHHHH---HHHHTEEEEEEEEEEEEEECC----CHHHHHHH
T ss_pred -------cCCCccEEEECCCCcc-cccC----cchhccHHHHHH---HHHHhcCCCcEEEEEccCccc-cCHHHHHHHHH
Confidence 1246899998766422 1001 000000112222 234556888666655432210 12245677888
Q ss_pred HHHhCCCeeEEEEEeccCCCCCC-cccEEEEEEEcC
Q psy13720 365 CLTQIGYQCTFGTLQAGHFGVSQ-TRRRAIVLAAAP 399 (487)
Q Consensus 365 ~l~~~GY~~~~~~l~a~~yGvPQ-~R~R~fiia~~~ 399 (487)
.|.+..=.+...... +|. .-...|++|++.
T Consensus 212 ~l~~~F~~v~~~~~~-----vP~~~g~~~~~~as~~ 242 (314)
T 1uir_A 212 TVREAFRYVRSYKNH-----IPGFFLNFGFLLASDA 242 (314)
T ss_dssp HHHTTCSEEEEEEEE-----EGGGTEEEEEEEEESS
T ss_pred HHHHHCCceEEEEEe-----cCCCCCeEEEEEEECC
Confidence 887764444332221 222 235678888764
No 152
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=94.04 E-value=0.29 Score=44.88 Aligned_cols=77 Identities=6% Similarity=0.042 Sum_probs=53.1
Q ss_pred CCCeEeecccCchHHHHHHhhc---CCCcEEEEEcCcHHHHHHHHHhC------CCCceeccchHHHHHHhhchhhhccc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKS---GVARSTWAIEFDSAAATAFKMNN------PGCTVFVDDCNKILQRVIDNEVCDDK 286 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~a---G~~~~~~a~e~~~~a~~t~~~N~------p~~~~~~~di~~~~~~~~~~~~~~~~ 286 (487)
+..++||+.||.|..+.-+... + ..++++|+++.+++..+.|+ ....++.+|+.+.+.....
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~------- 134 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPKD--GTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIH------- 134 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCTT--CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHT-------
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCCC--CEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhh-------
Confidence 4568999999999999998775 4 36899999999888777664 1255677888665432110
Q ss_pred cccCCCCCcccEEEccCC
Q psy13720 287 KQKLPRKGEVEMLCGGPP 304 (487)
Q Consensus 287 ~~~~p~~~~vd~i~ggpP 304 (487)
. ...+.+|+|+..++
T Consensus 135 --~-~~~~~fD~v~~~~~ 149 (225)
T 3tr6_A 135 --A-GQAWQYDLIYIDAD 149 (225)
T ss_dssp --T-TCTTCEEEEEECSC
T ss_pred --c-cCCCCccEEEECCC
Confidence 0 01147899985443
No 153
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=94.02 E-value=0.073 Score=48.61 Aligned_cols=68 Identities=12% Similarity=0.027 Sum_probs=52.2
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCCC---CceeccchHHHHHHhhchhhhccccccCCC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPG---CTVFVDDCNKILQRVIDNEVCDDKKQKLPR 292 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p~---~~~~~~di~~~~~~~~~~~~~~~~~~~~p~ 292 (487)
+..++||+-||.|.++.-+...|. -+.++|+++.+++..+.+... ..++.+|+.+ ++.
T Consensus 51 ~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~-----------------~~~ 111 (216)
T 3ofk_A 51 AVSNGLEIGCAAGAFTEKLAPHCK--RLTVIDVMPRAIGRACQRTKRWSHISWAATDILQ-----------------FST 111 (216)
T ss_dssp SEEEEEEECCTTSHHHHHHGGGEE--EEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTT-----------------CCC
T ss_pred CCCcEEEEcCCCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHhcccCCCeEEEEcchhh-----------------CCC
Confidence 457899999999999999988874 688999999999998888754 3445555432 223
Q ss_pred CCcccEEEcc
Q psy13720 293 KGEVEMLCGG 302 (487)
Q Consensus 293 ~~~vd~i~gg 302 (487)
.+.+|+|+..
T Consensus 112 ~~~fD~v~~~ 121 (216)
T 3ofk_A 112 AELFDLIVVA 121 (216)
T ss_dssp SCCEEEEEEE
T ss_pred CCCccEEEEc
Confidence 4579999875
No 154
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=93.92 E-value=0.099 Score=48.96 Aligned_cols=54 Identities=13% Similarity=0.165 Sum_probs=41.9
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCC----CCceeccchH
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP----GCTVFVDDCN 271 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p----~~~~~~~di~ 271 (487)
+..++||+.||.|.++.-+...|. .+.++|+++.+++..+.+.. ......+|+.
T Consensus 41 ~~~~vLDlGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~ 98 (252)
T 1wzn_A 41 EVRRVLDLACGTGIPTLELAERGY--EVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVL 98 (252)
T ss_dssp CCCEEEEETCTTCHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGG
T ss_pred CCCEEEEeCCCCCHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHHhcCCceEEEECChh
Confidence 446899999999999999988886 57899999998887776532 3445555553
No 155
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=93.92 E-value=0.11 Score=48.78 Aligned_cols=70 Identities=14% Similarity=0.081 Sum_probs=53.9
Q ss_pred CCCeEeecccCchHHHHHHhhc--CCCcEEEEEcCcHHHHHHHHHhCCCCceeccchHHHHHHhhchhhhccccccCCCC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKS--GVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRK 293 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~a--G~~~~~~a~e~~~~a~~t~~~N~p~~~~~~~di~~~~~~~~~~~~~~~~~~~~p~~ 293 (487)
...++||+-||.|.++.-+... +. .+.++|+++.+++..+.+.++.....+|+.+ ++..
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~~~~~--~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~-----------------~~~~ 93 (259)
T 2p35_A 33 RVLNGYDLGCGPGNSTELLTDRYGVN--VITGIDSDDDMLEKAADRLPNTNFGKADLAT-----------------WKPA 93 (259)
T ss_dssp CCSSEEEETCTTTHHHHHHHHHHCTT--SEEEEESCHHHHHHHHHHSTTSEEEECCTTT-----------------CCCS
T ss_pred CCCEEEEecCcCCHHHHHHHHhCCCC--EEEEEECCHHHHHHHHHhCCCcEEEECChhh-----------------cCcc
Confidence 5568999999999999988776 54 5789999999999988887777777666542 2223
Q ss_pred CcccEEEccCC
Q psy13720 294 GEVEMLCGGPP 304 (487)
Q Consensus 294 ~~vd~i~ggpP 304 (487)
+.+|+|+....
T Consensus 94 ~~fD~v~~~~~ 104 (259)
T 2p35_A 94 QKADLLYANAV 104 (259)
T ss_dssp SCEEEEEEESC
T ss_pred CCcCEEEEeCc
Confidence 57999987543
No 156
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=93.89 E-value=0.098 Score=48.83 Aligned_cols=57 Identities=14% Similarity=0.001 Sum_probs=43.2
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCC------CCceeccchHH
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP------GCTVFVDDCNK 272 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p------~~~~~~~di~~ 272 (487)
+..++||+.||.|..+..+..++-...+.++|+++.+++.-+.|+. ...++.+|+.+
T Consensus 71 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 133 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALE 133 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGG
T ss_pred CCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHH
Confidence 5678999999999999999874322468999999998887776641 34566677654
No 157
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=93.85 E-value=0.27 Score=47.03 Aligned_cols=43 Identities=9% Similarity=0.109 Sum_probs=34.5
Q ss_pred CCCCeEeecccCchHHHHHHhhc----CCCcEEEEEcCcHHHHHHHHHh
Q psy13720 215 ARPLRCLEVFAGAGGLSRGLDKS----GVARSTWAIEFDSAAATAFKMN 259 (487)
Q Consensus 215 ~~~l~~ldLFsG~Gg~s~Gl~~a----G~~~~~~a~e~~~~a~~t~~~N 259 (487)
++.-++|||-||.|.++.-+... |+ -+.++|+++..++.-+.+
T Consensus 69 ~~~~~vLDlGcGtG~~~~~la~~~~~~~~--~v~gvD~s~~ml~~A~~~ 115 (261)
T 4gek_A 69 QPGTQVYDLGCSLGAATLSVRRNIHHDNC--KIIAIDNSPAMIERCRRH 115 (261)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTCCSSSC--EEEEEESCHHHHHHHHHH
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhcCCCCC--EEEEEECCHHHHHHHHHH
Confidence 35668999999999999888653 43 478999999988876665
No 158
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=93.84 E-value=0.13 Score=47.70 Aligned_cols=72 Identities=15% Similarity=0.224 Sum_probs=53.0
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCCC--CceeccchHHHHHHhhchhhhccccccCCCC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPG--CTVFVDDCNKILQRVIDNEVCDDKKQKLPRK 293 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p~--~~~~~~di~~~~~~~~~~~~~~~~~~~~p~~ 293 (487)
...++||+-||.|.++.-+...|. ..+.++|+++.+++..+.+... ......|+..+ .+ ..
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~---------------~~-~~ 105 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAHEHGA-SYVLGLDLSEKMLARARAAGPDTGITYERADLDKL---------------HL-PQ 105 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGC---------------CC-CT
T ss_pred CCCEEEEEcCcCCHHHHHHHHCCC-CeEEEEcCCHHHHHHHHHhcccCCceEEEcChhhc---------------cC-CC
Confidence 456899999999999999988886 5789999999999998888754 33444454321 11 13
Q ss_pred CcccEEEccCC
Q psy13720 294 GEVEMLCGGPP 304 (487)
Q Consensus 294 ~~vd~i~ggpP 304 (487)
+.+|+|+....
T Consensus 106 ~~fD~v~~~~~ 116 (243)
T 3bkw_A 106 DSFDLAYSSLA 116 (243)
T ss_dssp TCEEEEEEESC
T ss_pred CCceEEEEecc
Confidence 57899987543
No 159
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=93.75 E-value=0.19 Score=50.10 Aligned_cols=75 Identities=17% Similarity=0.248 Sum_probs=54.7
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCC---------CCceeccchHHHHHHhhchhhhccc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP---------GCTVFVDDCNKILQRVIDNEVCDDK 286 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p---------~~~~~~~di~~~~~~~~~~~~~~~~ 286 (487)
...++|||-||.|+++.-+....-...+.++|+++.+++.-+.|++ ...++.+|+.+++..
T Consensus 120 ~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~---------- 189 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKN---------- 189 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHT----------
T ss_pred CCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHh----------
Confidence 4568999999999999998765212578999999999998887763 355677787665321
Q ss_pred cccCCCCCcccEEEccCC
Q psy13720 287 KQKLPRKGEVEMLCGGPP 304 (487)
Q Consensus 287 ~~~~p~~~~vd~i~ggpP 304 (487)
++ .+.+|+|+..++
T Consensus 190 ---~~-~~~fDlIi~d~~ 203 (334)
T 1xj5_A 190 ---AA-EGSYDAVIVDSS 203 (334)
T ss_dssp ---SC-TTCEEEEEECCC
T ss_pred ---cc-CCCccEEEECCC
Confidence 11 246899997654
No 160
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=93.74 E-value=0.062 Score=51.60 Aligned_cols=45 Identities=13% Similarity=0.292 Sum_probs=38.3
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP 261 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p 261 (487)
+..++||+.||.|.++.-+...|. ..+.++|+++.+++..+.+.+
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~~~-~~v~gvD~s~~~~~~a~~~~~ 108 (298)
T 1ri5_A 64 RGDSVLDLGCGKGGDLLKYERAGI-GEYYGVDIAEVSINDARVRAR 108 (298)
T ss_dssp TTCEEEEETCTTTTTHHHHHHHTC-SEEEEEESCHHHHHHHHHHHH
T ss_pred CCCeEEEECCCCCHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHH
Confidence 566899999999999988888885 578999999999888777653
No 161
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=93.74 E-value=0.16 Score=48.44 Aligned_cols=69 Identities=14% Similarity=0.186 Sum_probs=54.3
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCCCCceeccchHHHHHHhhchhhhccccccCCCCCc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGE 295 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p~~~~~~~di~~~~~~~~~~~~~~~~~~~~p~~~~ 295 (487)
...++||+-||.|.++.-+...|. .+.++|+++.+++..+.+.++.....+|+.. +|..+.
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~-----------------~~~~~~ 117 (279)
T 3ccf_A 57 PGEFILDLGCGTGQLTEKIAQSGA--EVLGTDNAATMIEKARQNYPHLHFDVADARN-----------------FRVDKP 117 (279)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHCTTSCEEECCTTT-----------------CCCSSC
T ss_pred CCCEEEEecCCCCHHHHHHHhCCC--eEEEEECCHHHHHHHHhhCCCCEEEECChhh-----------------CCcCCC
Confidence 456899999999999999988774 6789999999999888888777777766543 222357
Q ss_pred ccEEEccC
Q psy13720 296 VEMLCGGP 303 (487)
Q Consensus 296 vd~i~ggp 303 (487)
+|+|+...
T Consensus 118 fD~v~~~~ 125 (279)
T 3ccf_A 118 LDAVFSNA 125 (279)
T ss_dssp EEEEEEES
T ss_pred cCEEEEcc
Confidence 99998654
No 162
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=93.71 E-value=0.12 Score=49.71 Aligned_cols=47 Identities=11% Similarity=-0.033 Sum_probs=40.9
Q ss_pred CCCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCCCC
Q psy13720 215 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGC 263 (487)
Q Consensus 215 ~~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p~~ 263 (487)
.+..++|||.||.|.++.-|...|. -+.++|+++.+++..+.|....
T Consensus 44 ~~g~~VLDlGcGtG~~a~~La~~g~--~V~gvD~S~~ml~~Ar~~~~~~ 90 (261)
T 3iv6_A 44 VPGSTVAVIGASTRFLIEKALERGA--SVTVFDFSQRMCDDLAEALADR 90 (261)
T ss_dssp CTTCEEEEECTTCHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHTSSS
T ss_pred CCcCEEEEEeCcchHHHHHHHhcCC--EEEEEECCHHHHHHHHHHHHhc
Confidence 3567899999999999999988885 5789999999999999887654
No 163
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=93.69 E-value=0.21 Score=43.24 Aligned_cols=80 Identities=13% Similarity=0.123 Sum_probs=51.0
Q ss_pred CCCeEeecccCchHHHHHHhhc-CCCcEEEEEcCcHHHHHHHHHhCCCCceeccchHHHHHHhhchhhhccccccCCCCC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKG 294 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~a-G~~~~~~a~e~~~~a~~t~~~N~p~~~~~~~di~~~~~~~~~~~~~~~~~~~~p~~~ 294 (487)
+..++||+.||.|+++.-+... |-...+.++|+++ .++. ++......|+.+.... .++ ...++ .+
T Consensus 22 ~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~-----~~~~~~~~d~~~~~~~---~~~----~~~~~-~~ 87 (180)
T 1ej0_A 22 PGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI-----VGVDFLQGDFRDELVM---KAL----LERVG-DS 87 (180)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC-----TTEEEEESCTTSHHHH---HHH----HHHHT-TC
T ss_pred CCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc-----CcEEEEEcccccchhh---hhh----hccCC-CC
Confidence 4568999999999999988766 4213688999998 5432 4455666676543100 000 00011 24
Q ss_pred cccEEEccCCCcCcc
Q psy13720 295 EVEMLCGGPPCQGFS 309 (487)
Q Consensus 295 ~vd~i~ggpPCq~fS 309 (487)
.+|+|+..+|+..+.
T Consensus 88 ~~D~i~~~~~~~~~~ 102 (180)
T 1ej0_A 88 KVQVVMSDMAPNMSG 102 (180)
T ss_dssp CEEEEEECCCCCCCS
T ss_pred ceeEEEECCCccccC
Confidence 799999999887554
No 164
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=93.56 E-value=0.093 Score=48.70 Aligned_cols=69 Identities=14% Similarity=0.209 Sum_probs=50.7
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhC--CCCceeccchHHHHHHhhchhhhccccccCCCC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN--PGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRK 293 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~--p~~~~~~~di~~~~~~~~~~~~~~~~~~~~p~~ 293 (487)
+..++||+-||.|.++.-+...|. -+.++|+++.+++..+.+. ++...+.+|+.++ .++ .
T Consensus 53 ~~~~vLDiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~---------------~~~-~ 114 (242)
T 3l8d_A 53 KEAEVLDVGCGDGYGTYKLSRTGY--KAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSL---------------PFE-N 114 (242)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBC---------------SSC-T
T ss_pred CCCeEEEEcCCCCHHHHHHHHcCC--eEEEEECCHHHHHHHHhhcccCCceEEEcchhcC---------------CCC-C
Confidence 556899999999999999999886 5789999999999888774 2334445554321 111 3
Q ss_pred CcccEEEcc
Q psy13720 294 GEVEMLCGG 302 (487)
Q Consensus 294 ~~vd~i~gg 302 (487)
+.+|+|+..
T Consensus 115 ~~fD~v~~~ 123 (242)
T 3l8d_A 115 EQFEAIMAI 123 (242)
T ss_dssp TCEEEEEEE
T ss_pred CCccEEEEc
Confidence 579999864
No 165
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=93.55 E-value=0.13 Score=46.00 Aligned_cols=70 Identities=17% Similarity=0.135 Sum_probs=50.4
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhC-----CCCceeccchHHHHHHhhchhhhccccccC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN-----PGCTVFVDDCNKILQRVIDNEVCDDKKQKL 290 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~-----p~~~~~~~di~~~~~~~~~~~~~~~~~~~~ 290 (487)
+.-++||+.||.|.++.-+...|. .+.++|+++.+++..+.+. ++......|+.+ +
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~-----------------~ 92 (199)
T 2xvm_A 32 KPGKTLDLGCGNGRNSLYLAANGY--DVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNN-----------------L 92 (199)
T ss_dssp CSCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGG-----------------C
T ss_pred CCCeEEEEcCCCCHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhh-----------------C
Confidence 345899999999999999988885 5789999999888776653 234445555432 1
Q ss_pred CCCCcccEEEccCC
Q psy13720 291 PRKGEVEMLCGGPP 304 (487)
Q Consensus 291 p~~~~vd~i~ggpP 304 (487)
+..+.+|+|+....
T Consensus 93 ~~~~~~D~v~~~~~ 106 (199)
T 2xvm_A 93 TFDRQYDFILSTVV 106 (199)
T ss_dssp CCCCCEEEEEEESC
T ss_pred CCCCCceEEEEcch
Confidence 22457899986643
No 166
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=93.53 E-value=0.24 Score=48.87 Aligned_cols=148 Identities=20% Similarity=0.193 Sum_probs=83.3
Q ss_pred CCCeEeecccCchHHHHHHhhc-CCCcEEEEEcCcHHHHHHHHHhCCC---------CceeccchHHHHHHhhchhhhcc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMNNPG---------CTVFVDDCNKILQRVIDNEVCDD 285 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~a-G~~~~~~a~e~~~~a~~t~~~N~p~---------~~~~~~di~~~~~~~~~~~~~~~ 285 (487)
.+.++|||-||.|+++.-+... +. ..+.++|+|+.+++.-+.|++. ..++.+|..+++..
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~-~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~--------- 177 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESV-EKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKN--------- 177 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTC-CEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHH---------
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCC-CEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHh---------
Confidence 3458999999999999988765 33 5789999999999998888753 34566777654321
Q ss_pred ccccCCCCCcccEEEccCCCcCcccCCccCCcccccchhHHH-HHHH-HHhhhcCCcEEEEecCcchhcccchhHHHHHH
Q psy13720 286 KKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLI-VSYL-SYCDYYRPRFFLLENVRNFVAFKNSMVLKMTM 363 (487)
Q Consensus 286 ~~~~~p~~~~vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~-~~~l-~~v~~~~P~~~ilENV~gl~~~~~~~~~~~i~ 363 (487)
..+.+|+|+..++.. +... ..|+ .+++ .+.+.++|.-+++=|..... .....+..+.
T Consensus 178 ------~~~~fD~Ii~d~~~~-~~~~------------~~l~t~~~l~~~~~~LkpgG~lv~~~~~~~--~~~~~~~~~~ 236 (314)
T 2b2c_A 178 ------HKNEFDVIITDSSDP-VGPA------------ESLFGQSYYELLRDALKEDGILSSQGESVW--LHLPLIAHLV 236 (314)
T ss_dssp ------CTTCEEEEEECCC--------------------------HHHHHHHHEEEEEEEEEECCCTT--TCHHHHHHHH
T ss_pred ------cCCCceEEEEcCCCC-CCcc------------hhhhHHHHHHHHHhhcCCCeEEEEECCCcc--cCHHHHHHHH
Confidence 124689999866531 1110 1122 2222 23455688765554432211 1223456666
Q ss_pred HHHHhCCCeeEEEEEeccCCCCCCcc--cEEEEEEEcC
Q psy13720 364 RCLTQIGYQCTFGTLQAGHFGVSQTR--RRAIVLAAAP 399 (487)
Q Consensus 364 ~~l~~~GY~~~~~~l~a~~yGvPQ~R--~R~fiia~~~ 399 (487)
+.+.+.-=.+...... +|.-- .--|++|++.
T Consensus 237 ~~l~~vF~~v~~~~~~-----iP~~~~g~~g~~~ask~ 269 (314)
T 2b2c_A 237 AFNRKIFPAVTYAQSI-----VSTYPSGSMGYLICAKN 269 (314)
T ss_dssp HHHHHHCSEEEEEEEE-----CTTSGGGEEEEEEEESS
T ss_pred HHHHHHCCcceEEEEE-----ecCcCCCceEEEEEeCC
Confidence 6666553233332222 23221 2247777754
No 167
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=93.46 E-value=1.4 Score=40.33 Aligned_cols=74 Identities=14% Similarity=0.064 Sum_probs=45.0
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHH---HhCCCCceeccchHHHHHHhhchhhhccccccCCC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFK---MNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPR 292 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~---~N~p~~~~~~~di~~~~~~~~~~~~~~~~~~~~p~ 292 (487)
+.-++|||-||.|.++.-+...+-...++|+|+++.+++... ...++...+.+|+... ....+.
T Consensus 57 ~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~-------------~~~~~~ 123 (210)
T 1nt2_A 57 GDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKP-------------WKYSGI 123 (210)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCG-------------GGTTTT
T ss_pred CCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCc-------------hhhccc
Confidence 456899999999999887765421236899999998654322 2233444444554321 000122
Q ss_pred CCcccEEEcc
Q psy13720 293 KGEVEMLCGG 302 (487)
Q Consensus 293 ~~~vd~i~gg 302 (487)
.+.+|+|+..
T Consensus 124 ~~~fD~V~~~ 133 (210)
T 1nt2_A 124 VEKVDLIYQD 133 (210)
T ss_dssp CCCEEEEEEC
T ss_pred ccceeEEEEe
Confidence 3579999865
No 168
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=93.43 E-value=0.18 Score=46.91 Aligned_cols=69 Identities=14% Similarity=0.200 Sum_probs=52.9
Q ss_pred CCCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCCCCceeccchHHHHHHhhchhhhccccccCCCCC
Q psy13720 215 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKG 294 (487)
Q Consensus 215 ~~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p~~~~~~~di~~~~~~~~~~~~~~~~~~~~p~~~ 294 (487)
+...++||+-||.|.++.-+...|. + +.++|+++.+++..+.+ ......|+.+++. .++ .+
T Consensus 40 ~~~~~vLDiGcG~G~~~~~l~~~~~-~-v~gvD~s~~~~~~a~~~---~~~~~~d~~~~~~-------------~~~-~~ 100 (240)
T 3dli_A 40 KGCRRVLDIGCGRGEFLELCKEEGI-E-SIGVDINEDMIKFCEGK---FNVVKSDAIEYLK-------------SLP-DK 100 (240)
T ss_dssp TTCSCEEEETCTTTHHHHHHHHHTC-C-EEEECSCHHHHHHHHTT---SEEECSCHHHHHH-------------TSC-TT
T ss_pred cCCCeEEEEeCCCCHHHHHHHhCCC-c-EEEEECCHHHHHHHHhh---cceeeccHHHHhh-------------hcC-CC
Confidence 3557899999999999999988886 4 68999999999887776 5667778766531 122 25
Q ss_pred cccEEEcc
Q psy13720 295 EVEMLCGG 302 (487)
Q Consensus 295 ~vd~i~gg 302 (487)
.+|+|+..
T Consensus 101 ~fD~i~~~ 108 (240)
T 3dli_A 101 YLDGVMIS 108 (240)
T ss_dssp CBSEEEEE
T ss_pred CeeEEEEC
Confidence 78999864
No 169
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=93.39 E-value=0.13 Score=46.71 Aligned_cols=67 Identities=18% Similarity=0.033 Sum_probs=50.2
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCCCCceeccchHHHHHHhhchhhhccccccCCCCCc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGE 295 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p~~~~~~~di~~~~~~~~~~~~~~~~~~~~p~~~~ 295 (487)
...++||+-||.|.++.-+ |+ ..+.++|+++.+++..+.+.++.....+|+.++ .+ ..+.
T Consensus 36 ~~~~vLdiG~G~G~~~~~l---~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~---------------~~-~~~~ 95 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL---PY-PQKVGVEPSEAMLAVGRRRAPEATWVRAWGEAL---------------PF-PGES 95 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC---CC-SEEEEECCCHHHHHHHHHHCTTSEEECCCTTSC---------------CS-CSSC
T ss_pred CCCeEEEECCCCCHhHHhC---CC-CeEEEEeCCHHHHHHHHHhCCCcEEEEcccccC---------------CC-CCCc
Confidence 4568999999999988777 65 468999999999999888876666666665321 11 1347
Q ss_pred ccEEEcc
Q psy13720 296 VEMLCGG 302 (487)
Q Consensus 296 vd~i~gg 302 (487)
+|+|+..
T Consensus 96 fD~v~~~ 102 (211)
T 2gs9_A 96 FDVVLLF 102 (211)
T ss_dssp EEEEEEE
T ss_pred EEEEEEc
Confidence 8999865
No 170
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=93.38 E-value=0.68 Score=47.73 Aligned_cols=77 Identities=13% Similarity=0.117 Sum_probs=52.5
Q ss_pred CCCeEeecccCchHHHHHHhhc--------------CCCcEEEEEcCcHHHHHHHHHhC---C----CCceeccchHHHH
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKS--------------GVARSTWAIEFDSAAATAFKMNN---P----GCTVFVDDCNKIL 274 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~a--------------G~~~~~~a~e~~~~a~~t~~~N~---p----~~~~~~~di~~~~ 274 (487)
...+++|.+||.|++...+... .- ..++++|+++.+++.-+.|. . ...+.++|...
T Consensus 171 ~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~-~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~-- 247 (445)
T 2okc_A 171 MGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRD-KALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLE-- 247 (445)
T ss_dssp TTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHH-TTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTT--
T ss_pred CCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcC-eEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCC--
Confidence 4568999999999998876532 11 35899999999988777662 1 23344444311
Q ss_pred HHhhchhhhccccccCCCCCcccEEEccCCCcCccc
Q psy13720 275 QRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSG 310 (487)
Q Consensus 275 ~~~~~~~~~~~~~~~~p~~~~vd~i~ggpPCq~fS~ 310 (487)
.+..+.+|+|++-||..+...
T Consensus 248 ---------------~~~~~~fD~Iv~NPPf~~~~~ 268 (445)
T 2okc_A 248 ---------------KEPSTLVDVILANPPFGTRPA 268 (445)
T ss_dssp ---------------SCCSSCEEEEEECCCSSCCCT
T ss_pred ---------------CcccCCcCEEEECCCCCCccc
Confidence 122237999999999876654
No 171
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=93.30 E-value=0.15 Score=47.23 Aligned_cols=77 Identities=14% Similarity=0.073 Sum_probs=52.0
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCC------CCceeccchHHHHHHhhchhhhcccccc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP------GCTVFVDDCNKILQRVIDNEVCDDKKQK 289 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p------~~~~~~~di~~~~~~~~~~~~~~~~~~~ 289 (487)
+..++||+.||.|.++.-+....-...+.++|+++.+++.-+.|+. ...+..+|+.+.+..
T Consensus 54 ~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~------------- 120 (233)
T 2gpy_A 54 APARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEK------------- 120 (233)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHH-------------
T ss_pred CCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHh-------------
Confidence 4568999999999999888776211368899999998887777641 244556665442211
Q ss_pred CCCCCcccEEEccCCC
Q psy13720 290 LPRKGEVEMLCGGPPC 305 (487)
Q Consensus 290 ~p~~~~vd~i~ggpPC 305 (487)
.+..+.+|+|+...+|
T Consensus 121 ~~~~~~fD~I~~~~~~ 136 (233)
T 2gpy_A 121 LELYPLFDVLFIDAAK 136 (233)
T ss_dssp HTTSCCEEEEEEEGGG
T ss_pred cccCCCccEEEECCCH
Confidence 0012468999876665
No 172
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=93.29 E-value=0.1 Score=51.25 Aligned_cols=77 Identities=13% Similarity=0.096 Sum_probs=53.6
Q ss_pred CCCeEeecccCchHHHHHHhhcCC-CcEEEEEcCcHHHHHHHHHhC-----CCCceeccchHHHHHHhhchhhhcccccc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGV-ARSTWAIEFDSAAATAFKMNN-----PGCTVFVDDCNKILQRVIDNEVCDDKKQK 289 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~-~~~~~a~e~~~~a~~t~~~N~-----p~~~~~~~di~~~~~~~~~~~~~~~~~~~ 289 (487)
+..++||+.||.|.++.-+...+. ...+.++|+++.+++.-+.|. ++..+..+|+.+.
T Consensus 75 ~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~---------------- 138 (317)
T 1dl5_A 75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYG---------------- 138 (317)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC----------------
T ss_pred CcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhc----------------
Confidence 456899999999999988877653 124899999999888777663 3344555554321
Q ss_pred CCCCCcccEEEccCCCcCc
Q psy13720 290 LPRKGEVEMLCGGPPCQGF 308 (487)
Q Consensus 290 ~p~~~~vd~i~ggpPCq~f 308 (487)
++..+.+|+|+...++..+
T Consensus 139 ~~~~~~fD~Iv~~~~~~~~ 157 (317)
T 1dl5_A 139 VPEFSPYDVIFVTVGVDEV 157 (317)
T ss_dssp CGGGCCEEEEEECSBBSCC
T ss_pred cccCCCeEEEEEcCCHHHH
Confidence 1123468999988877544
No 173
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=93.28 E-value=0.15 Score=47.16 Aligned_cols=68 Identities=15% Similarity=0.049 Sum_probs=51.8
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCC-CCceeccchHHHHHHhhchhhhccccccCCCCC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP-GCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKG 294 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p-~~~~~~~di~~~~~~~~~~~~~~~~~~~~p~~~ 294 (487)
...++||+-||.|.++.-+...|. .+.++|+++.+++.-+.+.+ +.....+|+.++ +..+
T Consensus 42 ~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~-----------------~~~~ 102 (250)
T 2p7i_A 42 RPGNLLELGSFKGDFTSRLQEHFN--DITCVEASEEAISHAQGRLKDGITYIHSRFEDA-----------------QLPR 102 (250)
T ss_dssp CSSCEEEESCTTSHHHHHHTTTCS--CEEEEESCHHHHHHHHHHSCSCEEEEESCGGGC-----------------CCSS
T ss_pred CCCcEEEECCCCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHc-----------------CcCC
Confidence 445799999999999999988885 47899999999999888876 444555555321 2235
Q ss_pred cccEEEcc
Q psy13720 295 EVEMLCGG 302 (487)
Q Consensus 295 ~vd~i~gg 302 (487)
.+|+|+..
T Consensus 103 ~fD~v~~~ 110 (250)
T 2p7i_A 103 RYDNIVLT 110 (250)
T ss_dssp CEEEEEEE
T ss_pred cccEEEEh
Confidence 78999865
No 174
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=93.21 E-value=0.18 Score=46.47 Aligned_cols=79 Identities=9% Similarity=0.005 Sum_probs=53.5
Q ss_pred CCCeEeecccCchHHHHHHhhcCC-CcEEEEEcCcHHHHHHHHHhC------CCCceeccchHHHHHHhhchhhhccccc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGV-ARSTWAIEFDSAAATAFKMNN------PGCTVFVDDCNKILQRVIDNEVCDDKKQ 288 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~-~~~~~a~e~~~~a~~t~~~N~------p~~~~~~~di~~~~~~~~~~~~~~~~~~ 288 (487)
..-++||+.||.|.++.-+..+.- ...+.++|+++.+++.-+.|+ ....++.+|+.+.+..... .
T Consensus 69 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~--------~ 140 (229)
T 2avd_A 69 QAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLA--------A 140 (229)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHH--------T
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHh--------c
Confidence 456899999999999998877510 136899999998888777654 2345677787665432210 0
Q ss_pred cCCCCCcccEEEccCC
Q psy13720 289 KLPRKGEVEMLCGGPP 304 (487)
Q Consensus 289 ~~p~~~~vd~i~ggpP 304 (487)
. ..+.+|+|+..++
T Consensus 141 ~--~~~~~D~v~~d~~ 154 (229)
T 2avd_A 141 G--EAGTFDVAVVDAD 154 (229)
T ss_dssp T--CTTCEEEEEECSC
T ss_pred C--CCCCccEEEECCC
Confidence 0 0136899987655
No 175
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=93.20 E-value=0.13 Score=47.89 Aligned_cols=43 Identities=23% Similarity=0.268 Sum_probs=36.0
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN 260 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~ 260 (487)
..-++||+.||.|.++.-+...+ ..+.++|+++.+++.-+.|.
T Consensus 91 ~~~~vldiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~ 133 (248)
T 2yvl_A 91 KEKRVLEFGTGSGALLAVLSEVA--GEVWTFEAVEEFYKTAQKNL 133 (248)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHS--SEEEEECSCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCccHHHHHHHHhC--CEEEEEecCHHHHHHHHHHH
Confidence 45689999999999998887775 36899999999988877764
No 176
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=93.17 E-value=0.098 Score=48.25 Aligned_cols=79 Identities=11% Similarity=0.046 Sum_probs=51.4
Q ss_pred CCCeEeecccCchHHHHHHhhcCC-----CcEEEEEcCcHHHHHHHHHhC----------CCCceeccchHHHHHHhhch
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGV-----ARSTWAIEFDSAAATAFKMNN----------PGCTVFVDDCNKILQRVIDN 280 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~-----~~~~~a~e~~~~a~~t~~~N~----------p~~~~~~~di~~~~~~~~~~ 280 (487)
+..++||+.||.|.++.-+...+. ...+.++|+++.+++.-+.|. +...+..+|+.......
T Consensus 80 ~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~--- 156 (227)
T 2pbf_A 80 PGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEE--- 156 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHH---
T ss_pred CCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhccccc---
Confidence 456899999999999988876531 126899999999888777663 33445555654310000
Q ss_pred hhhccccccCCCCCcccEEEccCCCc
Q psy13720 281 EVCDDKKQKLPRKGEVEMLCGGPPCQ 306 (487)
Q Consensus 281 ~~~~~~~~~~p~~~~vd~i~ggpPCq 306 (487)
.+..+.+|+|+.+.++.
T Consensus 157 ---------~~~~~~fD~I~~~~~~~ 173 (227)
T 2pbf_A 157 ---------KKELGLFDAIHVGASAS 173 (227)
T ss_dssp ---------HHHHCCEEEEEECSBBS
T ss_pred ---------CccCCCcCEEEECCchH
Confidence 01123689998877664
No 177
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=93.17 E-value=0.15 Score=44.50 Aligned_cols=53 Identities=13% Similarity=0.097 Sum_probs=45.1
Q ss_pred CCCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCCCCceeccc
Q psy13720 215 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDD 269 (487)
Q Consensus 215 ~~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p~~~~~~~d 269 (487)
.+..++||+-||.|.++.-+...+. .+.++|+++.+++..+.+.++.....+|
T Consensus 16 ~~~~~vLDiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~v~~~~~d 68 (170)
T 3i9f_A 16 GKKGVIVDYGCGNGFYCKYLLEFAT--KLYCIDINVIALKEVKEKFDSVITLSDP 68 (170)
T ss_dssp SCCEEEEEETCTTCTTHHHHHTTEE--EEEEECSCHHHHHHHHHHCTTSEEESSG
T ss_pred CCCCeEEEECCCCCHHHHHHHhhcC--eEEEEeCCHHHHHHHHHhCCCcEEEeCC
Confidence 4567899999999999999988873 7899999999999998887777666666
No 178
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=93.16 E-value=0.14 Score=54.64 Aligned_cols=59 Identities=22% Similarity=0.374 Sum_probs=46.5
Q ss_pred CCCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHh---CC--CCceeccchHHHHH
Q psy13720 215 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMN---NP--GCTVFVDDCNKILQ 275 (487)
Q Consensus 215 ~~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N---~p--~~~~~~~di~~~~~ 275 (487)
+++++|||+=||.|-++..|.+.|. .|.++|..+.+++.-+.. .+ +....+.++.++..
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~~ga--~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~ 128 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLASKGA--TIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIA 128 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHH
T ss_pred CCCCeEEEECCCCcHHHHHHHhCCC--EEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhh
Confidence 5789999999999999999999997 478999999988765543 22 23456778877643
No 179
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=93.16 E-value=0.55 Score=43.97 Aligned_cols=130 Identities=12% Similarity=0.056 Sum_probs=70.6
Q ss_pred CCCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHh-----------CCCCceeccchHHHHHHhhchhhh
Q psy13720 215 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMN-----------NPGCTVFVDDCNKILQRVIDNEVC 283 (487)
Q Consensus 215 ~~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N-----------~p~~~~~~~di~~~~~~~~~~~~~ 283 (487)
....++|||-||.|.++..+....-...+.++|+++.+++.-+.+ .++..++.+|+.+.+.
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~-------- 116 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLP-------- 116 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHH--------
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhh--------
Confidence 356789999999999999987653213689999999887654422 2345566667654211
Q ss_pred ccccccCCCCCcccEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhhcCCcEEEEecCcchhcccchhHHHHHH
Q psy13720 284 DDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTM 363 (487)
Q Consensus 284 ~~~~~~~p~~~~vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~~~P~~~ilENV~gl~~~~~~~~~~~i~ 363 (487)
..++ .+.+|.|+..+|..-+..... ++.. ....++.++. ..++|.-.++ +..........++
T Consensus 117 ----~~~~-~~~~D~v~~~~~dp~~k~~h~--krr~--~~~~~l~~~~---~~LkpGG~l~------~~td~~~~~~~~~ 178 (235)
T 3ckk_A 117 ----NFFY-KGQLTKMFFLFPDPHFKRTKH--KWRI--ISPTLLAEYA---YVLRVGGLVY------TITDVLELHDWMC 178 (235)
T ss_dssp ----HHCC-TTCEEEEEEESCC-------------C--CCHHHHHHHH---HHEEEEEEEE------EEESCHHHHHHHH
T ss_pred ----hhCC-CcCeeEEEEeCCCchhhhhhh--hhhh--hhHHHHHHHH---HHCCCCCEEE------EEeCCHHHHHHHH
Confidence 1122 357898887776544332111 1110 1123444443 4456764332 1112223456677
Q ss_pred HHHHhCC
Q psy13720 364 RCLTQIG 370 (487)
Q Consensus 364 ~~l~~~G 370 (487)
+.|.+.|
T Consensus 179 ~~l~~~~ 185 (235)
T 3ckk_A 179 THFEEHP 185 (235)
T ss_dssp HHHHTST
T ss_pred HHHHHCC
Confidence 7777665
No 180
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=93.11 E-value=0.11 Score=46.94 Aligned_cols=146 Identities=12% Similarity=0.049 Sum_probs=81.2
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhC----CCCceeccchHHHHHHhhchhhhccccccCC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN----PGCTVFVDDCNKILQRVIDNEVCDDKKQKLP 291 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~----p~~~~~~~di~~~~~~~~~~~~~~~~~~~~p 291 (487)
.. ++||+-||.|.++.-+...|. .+.++|+++.+++.-+.+. ....+...|+.++ .++
T Consensus 30 ~~-~vLdiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~---------------~~~ 91 (202)
T 2kw5_A 30 QG-KILCLAEGEGRNACFLASLGY--EVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADF---------------DIV 91 (202)
T ss_dssp SS-EEEECCCSCTHHHHHHHTTTC--EEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTB---------------SCC
T ss_pred CC-CEEEECCCCCHhHHHHHhCCC--eEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhc---------------CCC
Confidence 44 999999999999999988886 6889999999888776653 2334445554321 112
Q ss_pred CCCcccEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhhcCCcEEE--EecCcchhcc-c-------chhHHHH
Q psy13720 292 RKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFL--LENVRNFVAF-K-------NSMVLKM 361 (487)
Q Consensus 292 ~~~~vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~~~P~~~i--lENV~gl~~~-~-------~~~~~~~ 361 (487)
.+.+|+|+... + .. ...+ ...++.+ +.+.++|.-.+ ......-... . .......
T Consensus 92 -~~~fD~v~~~~-~-------~~---~~~~-~~~~l~~---~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (202)
T 2kw5_A 92 -ADAWEGIVSIF-C-------HL---PSSL-RQQLYPK---VYQGLKPGGVFILEGFAPEQLQYNTGGPKDLDLLPKLET 155 (202)
T ss_dssp -TTTCSEEEEEC-C-------CC---CHHH-HHHHHHH---HHTTCCSSEEEEEEEECTTTGGGTSCCSSSGGGCCCHHH
T ss_pred -cCCccEEEEEh-h-------cC---CHHH-HHHHHHH---HHHhcCCCcEEEEEEeccccccCCCCCCCcceeecCHHH
Confidence 35789998632 1 10 0011 1223333 34556786433 2222211110 0 0112345
Q ss_pred HHHHHHhCCCeeEEEE--EeccCCCCCCcccEEEEEEE
Q psy13720 362 TMRCLTQIGYQCTFGT--LQAGHFGVSQTRRRAIVLAA 397 (487)
Q Consensus 362 i~~~l~~~GY~~~~~~--l~a~~yGvPQ~R~R~fiia~ 397 (487)
+.+.|. |+.+.... -....-|.++.-.+.+|-+.
T Consensus 156 l~~~l~--Gf~v~~~~~~~~~~~~g~~~~~~~~~i~~~ 191 (202)
T 2kw5_A 156 LQSELP--SLNWLIANNLERNLDEGAYHQGKAALIQLL 191 (202)
T ss_dssp HHHHCS--SSCEEEEEEEEEECSCSSSSCCEEEEEEEE
T ss_pred HHHHhc--CceEEEEEEEEeecCCCCCcccHHHHHHHH
Confidence 555555 98765432 22244577777667766554
No 181
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=93.10 E-value=0.16 Score=46.88 Aligned_cols=105 Identities=17% Similarity=0.188 Sum_probs=65.5
Q ss_pred CCCeEeecccCchHHHHHHhhc---CCCcEEEEEcCcHHHHHHHHHhCC------CCceeccchHHHHHHhhchhhhccc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKS---GVARSTWAIEFDSAAATAFKMNNP------GCTVFVDDCNKILQRVIDNEVCDDK 286 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~a---G~~~~~~a~e~~~~a~~t~~~N~p------~~~~~~~di~~~~~~~~~~~~~~~~ 286 (487)
+.-++|||.||.|..+.-+..+ | ..++++|+++.+++.-+.|.. ...++.+|..+++...
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~--------- 126 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLLQPG--ARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQL--------- 126 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTSCTT--CEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGT---------
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCC--CEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHH---------
Confidence 5568999999999999998764 3 368899999998888777632 2456777876643211
Q ss_pred cccCCCCCcccEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhhcCCc-EEEEecCc
Q psy13720 287 KQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPR-FFLLENVR 348 (487)
Q Consensus 287 ~~~~p~~~~vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~~~P~-~~ilENV~ 348 (487)
.... ..+.+|+|+...++..+ .. ...+++.+..++|. .+++.|+.
T Consensus 127 ~~~~-~~~~fD~V~~d~~~~~~--------------~~--~~~~~~~~~~LkpgG~lv~~~~~ 172 (221)
T 3u81_A 127 KKKY-DVDTLDMVFLDHWKDRY--------------LP--DTLLLEKCGLLRKGTVLLADNVI 172 (221)
T ss_dssp TTTS-CCCCCSEEEECSCGGGH--------------HH--HHHHHHHTTCCCTTCEEEESCCC
T ss_pred HHhc-CCCceEEEEEcCCcccc--------------hH--HHHHHHhccccCCCeEEEEeCCC
Confidence 0000 12468999865432111 00 12333334667885 56677775
No 182
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=93.09 E-value=0.15 Score=46.26 Aligned_cols=68 Identities=12% Similarity=0.008 Sum_probs=50.3
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhC-CCCceeccchHHHHHHhhchhhhccccccCCCCC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN-PGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKG 294 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~-p~~~~~~~di~~~~~~~~~~~~~~~~~~~~p~~~ 294 (487)
...++||+-||.|.++.-+...|. -+.++|+++.+++..+.+. ++.....+|+.+ +...+
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~-----------------~~~~~ 106 (218)
T 3ou2_A 46 IRGDVLELASGTGYWTRHLSGLAD--RVTALDGSAEMIAEAGRHGLDNVEFRQQDLFD-----------------WTPDR 106 (218)
T ss_dssp SCSEEEEESCTTSHHHHHHHHHSS--EEEEEESCHHHHHHHGGGCCTTEEEEECCTTS-----------------CCCSS
T ss_pred CCCeEEEECCCCCHHHHHHHhcCC--eEEEEeCCHHHHHHHHhcCCCCeEEEeccccc-----------------CCCCC
Confidence 445899999999999999988885 5789999999998877643 444555555432 11245
Q ss_pred cccEEEcc
Q psy13720 295 EVEMLCGG 302 (487)
Q Consensus 295 ~vd~i~gg 302 (487)
.+|+|+..
T Consensus 107 ~~D~v~~~ 114 (218)
T 3ou2_A 107 QWDAVFFA 114 (218)
T ss_dssp CEEEEEEE
T ss_pred ceeEEEEe
Confidence 79999864
No 183
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=92.97 E-value=0.095 Score=49.19 Aligned_cols=73 Identities=14% Similarity=0.184 Sum_probs=51.9
Q ss_pred cCCCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCCC------CceeccchHHHHHHhhchhhhcccc
Q psy13720 214 IARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPG------CTVFVDDCNKILQRVIDNEVCDDKK 287 (487)
Q Consensus 214 ~~~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p~------~~~~~~di~~~~~~~~~~~~~~~~~ 287 (487)
++...++||+-||.|.++.-+...+. ..+.++|+++.+++..+.+... ..+.++|+.+
T Consensus 44 ~~~~~~vLDiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--------------- 107 (257)
T 3f4k_A 44 LTDDAKIADIGCGTGGQTLFLADYVK-GQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDN--------------- 107 (257)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHCC-SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTS---------------
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHhCC-CeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhh---------------
Confidence 34556899999999999999988764 3789999999988877766421 3344555422
Q ss_pred ccCC-CCCcccEEEccCC
Q psy13720 288 QKLP-RKGEVEMLCGGPP 304 (487)
Q Consensus 288 ~~~p-~~~~vd~i~ggpP 304 (487)
+| ..+.+|+|+....
T Consensus 108 --~~~~~~~fD~v~~~~~ 123 (257)
T 3f4k_A 108 --LPFQNEELDLIWSEGA 123 (257)
T ss_dssp --CSSCTTCEEEEEEESC
T ss_pred --CCCCCCCEEEEEecCh
Confidence 22 1357999987643
No 184
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=92.95 E-value=0.16 Score=47.21 Aligned_cols=72 Identities=10% Similarity=0.091 Sum_probs=50.0
Q ss_pred CCeEeecccCchHHHHHHhhc-CCCcEEEEEcCcHHHHHHHHHhCC-------CCceeccchHHHHHHhhchhhhccccc
Q psy13720 217 PLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMNNP-------GCTVFVDDCNKILQRVIDNEVCDDKKQ 288 (487)
Q Consensus 217 ~l~~ldLFsG~Gg~s~Gl~~a-G~~~~~~a~e~~~~a~~t~~~N~p-------~~~~~~~di~~~~~~~~~~~~~~~~~~ 288 (487)
..++||+.||.|..+..+..+ +-...+.++|+++..++.-+.|+. ...++.+|..+++.
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~------------- 123 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMS------------- 123 (221)
T ss_dssp CCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGG-------------
T ss_pred CCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHH-------------
Confidence 448999999999999988764 111367899999998887777642 34566777665531
Q ss_pred cCCCCCcccEEEcc
Q psy13720 289 KLPRKGEVEMLCGG 302 (487)
Q Consensus 289 ~~p~~~~vd~i~gg 302 (487)
.++ .+.+|+|+..
T Consensus 124 ~~~-~~~fD~V~~d 136 (221)
T 3dr5_A 124 RLA-NDSYQLVFGQ 136 (221)
T ss_dssp GSC-TTCEEEEEEC
T ss_pred Hhc-CCCcCeEEEc
Confidence 111 3479999764
No 185
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=92.92 E-value=0.11 Score=50.67 Aligned_cols=43 Identities=21% Similarity=0.122 Sum_probs=37.0
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN 260 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~ 260 (487)
..-+|||+|||.|.....+...|. -++++|+++.+++.-+.|.
T Consensus 235 ~~~~vlD~f~GsGt~~~~a~~~g~--~~~g~e~~~~~~~~a~~r~ 277 (297)
T 2zig_A 235 VGDVVLDPFAGTGTTLIAAARWGR--RALGVELVPRYAQLAKERF 277 (297)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTTC--EEEEEESCHHHHHHHHHHH
T ss_pred CCCEEEECCCCCCHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHH
Confidence 345799999999999999999995 5789999999998877664
No 186
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=92.86 E-value=0.13 Score=49.22 Aligned_cols=71 Identities=11% Similarity=0.120 Sum_probs=51.6
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhC------CCCceeccchHHHHHHhhchhhhcccccc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN------PGCTVFVDDCNKILQRVIDNEVCDDKKQK 289 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~------p~~~~~~~di~~~~~~~~~~~~~~~~~~~ 289 (487)
...++||+-||.|.++.-+...|. .+.++|+++.+++..+.+. +...++.+|+.++. .
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--------------~ 131 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAERGH--QVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVA--------------S 131 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTG--------------G
T ss_pred CCCEEEEeCCcchHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhh--------------h
Confidence 357899999999999999988886 5789999999988877764 23345566654321 0
Q ss_pred CCCCCcccEEEccC
Q psy13720 290 LPRKGEVEMLCGGP 303 (487)
Q Consensus 290 ~p~~~~vd~i~ggp 303 (487)
+ ..+.+|+|+...
T Consensus 132 ~-~~~~fD~v~~~~ 144 (285)
T 4htf_A 132 H-LETPVDLILFHA 144 (285)
T ss_dssp G-CSSCEEEEEEES
T ss_pred h-cCCCceEEEECc
Confidence 1 235799998653
No 187
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=92.81 E-value=0.19 Score=50.15 Aligned_cols=70 Identities=21% Similarity=0.266 Sum_probs=47.8
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHh----C--CCCceeccchHHHHHHhhchhhhcccccc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMN----N--PGCTVFVDDCNKILQRVIDNEVCDDKKQK 289 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N----~--p~~~~~~~di~~~~~~~~~~~~~~~~~~~ 289 (487)
+..++||+-||.|.++.-+..+|. ..+.++|+++.+ +..+.+ . +...++.+|+.+
T Consensus 50 ~~~~VLDiGcGtG~ls~~la~~g~-~~V~~vD~s~~~-~~a~~~~~~~~l~~~v~~~~~d~~~----------------- 110 (348)
T 2y1w_A 50 KDKIVLDVGCGSGILSFFAAQAGA-RKIYAVEASTMA-QHAEVLVKSNNLTDRIVVIPGKVEE----------------- 110 (348)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC-SEEEEEECSTHH-HHHHHHHHHTTCTTTEEEEESCTTT-----------------
T ss_pred CcCEEEEcCCCccHHHHHHHhCCC-CEEEEECCHHHH-HHHHHHHHHcCCCCcEEEEEcchhh-----------------
Confidence 456899999999999999988886 678999999743 333332 1 234455555432
Q ss_pred CCCCCcccEEEccCC
Q psy13720 290 LPRKGEVEMLCGGPP 304 (487)
Q Consensus 290 ~p~~~~vd~i~ggpP 304 (487)
++.++.+|+|+..++
T Consensus 111 ~~~~~~~D~Ivs~~~ 125 (348)
T 2y1w_A 111 VSLPEQVDIIISEPM 125 (348)
T ss_dssp CCCSSCEEEEEECCC
T ss_pred CCCCCceeEEEEeCc
Confidence 122357999998765
No 188
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=92.78 E-value=0.18 Score=47.29 Aligned_cols=71 Identities=14% Similarity=0.208 Sum_probs=51.9
Q ss_pred CCCCeEeecccCchHHHHHHhhc-CCCcEEEEEcCcHHHHHHHHHhCC---CCceeccchHHHHHHhhchhhhccccccC
Q psy13720 215 ARPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMNNP---GCTVFVDDCNKILQRVIDNEVCDDKKQKL 290 (487)
Q Consensus 215 ~~~l~~ldLFsG~Gg~s~Gl~~a-G~~~~~~a~e~~~~a~~t~~~N~p---~~~~~~~di~~~~~~~~~~~~~~~~~~~~ 290 (487)
++..++||+-||.|.++.-+... |. .+.++|+++.+++..+.+.. ......+|+.++ .+
T Consensus 54 ~~~~~vLdiG~G~G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~---------------~~ 116 (266)
T 3ujc_A 54 NENSKVLDIGSGLGGGCMYINEKYGA--HTHGIDICSNIVNMANERVSGNNKIIFEANDILTK---------------EF 116 (266)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCC--EEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTC---------------CC
T ss_pred CCCCEEEEECCCCCHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccC---------------CC
Confidence 45678999999999999998876 64 68899999999999888773 334455554321 11
Q ss_pred CCCCcccEEEccC
Q psy13720 291 PRKGEVEMLCGGP 303 (487)
Q Consensus 291 p~~~~vd~i~ggp 303 (487)
+ .+.+|+|+...
T Consensus 117 ~-~~~fD~v~~~~ 128 (266)
T 3ujc_A 117 P-ENNFDLIYSRD 128 (266)
T ss_dssp C-TTCEEEEEEES
T ss_pred C-CCcEEEEeHHH
Confidence 1 35799998643
No 189
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=92.78 E-value=0.21 Score=47.47 Aligned_cols=74 Identities=11% Similarity=0.086 Sum_probs=52.0
Q ss_pred CCCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhC-----CCCceeccchHHHHHHhhchhhhcccccc
Q psy13720 215 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN-----PGCTVFVDDCNKILQRVIDNEVCDDKKQK 289 (487)
Q Consensus 215 ~~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~-----p~~~~~~~di~~~~~~~~~~~~~~~~~~~ 289 (487)
.+..++||+-||.|.++.-+...+-...+.++|+++.+++..+.+. ++......|+.++ .
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~---------------~ 100 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSL---------------P 100 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGC---------------C
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccC---------------C
Confidence 4667899999999999999987742136889999998888776653 3444555565431 1
Q ss_pred CCCCCcccEEEccCC
Q psy13720 290 LPRKGEVEMLCGGPP 304 (487)
Q Consensus 290 ~p~~~~vd~i~ggpP 304 (487)
+ ..+.+|+|+....
T Consensus 101 ~-~~~~fD~v~~~~~ 114 (276)
T 3mgg_A 101 F-EDSSFDHIFVCFV 114 (276)
T ss_dssp S-CTTCEEEEEEESC
T ss_pred C-CCCCeeEEEEech
Confidence 1 2357999987543
No 190
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=92.76 E-value=0.15 Score=49.35 Aligned_cols=56 Identities=5% Similarity=0.081 Sum_probs=43.4
Q ss_pred CCCeEeecccCchHHHHHHhh--cCCCcEEEEEcCcHHHHHHHHHh-------CCCCceeccchHH
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDK--SGVARSTWAIEFDSAAATAFKMN-------NPGCTVFVDDCNK 272 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~--aG~~~~~~a~e~~~~a~~t~~~N-------~p~~~~~~~di~~ 272 (487)
+..++||+-||.|.++.-+.. .+. ..+.++|+++.+++..+.+ .+......+|+.+
T Consensus 36 ~~~~vLDiGcG~G~~~~~la~~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~ 100 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMAQELKPF-EQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDD 100 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHHHHSSCC-SEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTC
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCC-CEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHh
Confidence 567899999999999999885 343 4789999999988877765 4455666677653
No 191
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=92.72 E-value=0.14 Score=50.94 Aligned_cols=70 Identities=17% Similarity=0.154 Sum_probs=48.6
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhC------CCCceeccchHHHHHHhhchhhhcccccc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN------PGCTVFVDDCNKILQRVIDNEVCDDKKQK 289 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~------p~~~~~~~di~~~~~~~~~~~~~~~~~~~ 289 (487)
+.-++||+-||.|.++.-+..+|. .-+.|+|+++ +++..+.|. +...++.+|+.++ .
T Consensus 64 ~~~~VLDiGcGtG~ls~~la~~g~-~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~---------------~ 126 (340)
T 2fyt_A 64 KDKVVLDVGCGTGILSMFAAKAGA-KKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEV---------------H 126 (340)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC-SEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTS---------------C
T ss_pred CCCEEEEeeccCcHHHHHHHHcCC-CEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHh---------------c
Confidence 456899999999999999998886 6789999996 555544442 2344555554321 1
Q ss_pred CCCCCcccEEEccC
Q psy13720 290 LPRKGEVEMLCGGP 303 (487)
Q Consensus 290 ~p~~~~vd~i~ggp 303 (487)
+| .+.+|+|+..+
T Consensus 127 ~~-~~~~D~Ivs~~ 139 (340)
T 2fyt_A 127 LP-VEKVDVIISEW 139 (340)
T ss_dssp CS-CSCEEEEEECC
T ss_pred CC-CCcEEEEEEcC
Confidence 22 24799998754
No 192
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=92.62 E-value=0.18 Score=47.34 Aligned_cols=70 Identities=20% Similarity=0.191 Sum_probs=51.3
Q ss_pred CCCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhC----CCCceeccchHHHHHHhhchhhhccccccC
Q psy13720 215 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN----PGCTVFVDDCNKILQRVIDNEVCDDKKQKL 290 (487)
Q Consensus 215 ~~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~----p~~~~~~~di~~~~~~~~~~~~~~~~~~~~ 290 (487)
....++||+-||.|.++.-+...|. .+.++|+++.+++..+.+. ++.....+|+.+ +
T Consensus 38 ~~~~~vLDiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~-----------------~ 98 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIALPLIARGY--RYIALDADAAMLEVFRQKIAGVDRKVQVVQADARA-----------------I 98 (263)
T ss_dssp SSCCEEEEETCTTSTTHHHHHTTTC--EEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTS-----------------C
T ss_pred CCCCEEEEeCCcCCHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhhccCCceEEEEccccc-----------------C
Confidence 3566899999999999999988875 5889999999999888774 344444555422 2
Q ss_pred C-CCCcccEEEccC
Q psy13720 291 P-RKGEVEMLCGGP 303 (487)
Q Consensus 291 p-~~~~vd~i~ggp 303 (487)
| ..+.+|+|+...
T Consensus 99 ~~~~~~fD~v~~~~ 112 (263)
T 2yqz_A 99 PLPDESVHGVIVVH 112 (263)
T ss_dssp CSCTTCEEEEEEES
T ss_pred CCCCCCeeEEEECC
Confidence 2 134789998753
No 193
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=92.47 E-value=0.22 Score=49.77 Aligned_cols=71 Identities=21% Similarity=0.219 Sum_probs=49.3
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHh----C-CC-CceeccchHHHHHHhhchhhhcccccc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMN----N-PG-CTVFVDDCNKILQRVIDNEVCDDKKQK 289 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N----~-p~-~~~~~~di~~~~~~~~~~~~~~~~~~~ 289 (487)
+..++||+.||.|.++.-+..+|. .-++++|+++ +++..+.+ . ++ ..++.+|+.++ .
T Consensus 66 ~~~~VLDvGcG~G~~~~~la~~g~-~~v~gvD~s~-~l~~a~~~~~~~~~~~~v~~~~~d~~~~---------------~ 128 (349)
T 3q7e_A 66 KDKVVLDVGSGTGILCMFAAKAGA-RKVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEV---------------E 128 (349)
T ss_dssp TTCEEEEESCTTSHHHHHHHHTTC-SEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTC---------------C
T ss_pred CCCEEEEEeccchHHHHHHHHCCC-CEEEEECcHH-HHHHHHHHHHHcCCCCcEEEEECcHHHc---------------c
Confidence 556899999999999999999986 6789999995 44444433 2 22 34555565432 1
Q ss_pred CCCCCcccEEEccCC
Q psy13720 290 LPRKGEVEMLCGGPP 304 (487)
Q Consensus 290 ~p~~~~vd~i~ggpP 304 (487)
+| .+.+|+|+..+.
T Consensus 129 ~~-~~~fD~Iis~~~ 142 (349)
T 3q7e_A 129 LP-VEKVDIIISEWM 142 (349)
T ss_dssp CS-SSCEEEEEECCC
T ss_pred CC-CCceEEEEEccc
Confidence 22 357999998654
No 194
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=92.46 E-value=0.73 Score=43.03 Aligned_cols=46 Identities=2% Similarity=-0.125 Sum_probs=38.2
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCCC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPG 262 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p~ 262 (487)
...++||+-||.|.++.-+...|. ..+.++|+++.+++..+.+...
T Consensus 56 ~~~~vLDlGcG~G~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~ 101 (265)
T 2i62_A 56 KGELLIDIGSGPTIYQLLSACESF-TEIIVSDYTDQNLWELQKWLKK 101 (265)
T ss_dssp CEEEEEEESCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCccHHHHHHhhccc-CeEEEecCCHHHHHHHHHHHhc
Confidence 456899999999999888887786 5789999999998887766543
No 195
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=92.44 E-value=0.17 Score=52.96 Aligned_cols=70 Identities=20% Similarity=0.237 Sum_probs=48.2
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhC------CCCceeccchHHHHHHhhchhhhcccccc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN------PGCTVFVDDCNKILQRVIDNEVCDDKKQK 289 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~------p~~~~~~~di~~~~~~~~~~~~~~~~~~~ 289 (487)
+..++||+.||.|.++.-+...|. .-+.|+|+++ +++..+.|. ....++.+|+.+
T Consensus 158 ~~~~VLDiGcGtG~la~~la~~~~-~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~----------------- 218 (480)
T 3b3j_A 158 KDKIVLDVGCGSGILSFFAAQAGA-RKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEE----------------- 218 (480)
T ss_dssp TTCEEEEESCSTTHHHHHHHHTTC-SEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTT-----------------
T ss_pred CCCEEEEecCcccHHHHHHHHcCC-CEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhh-----------------
Confidence 456899999999999999888886 5789999998 554444432 223445555432
Q ss_pred CCCCCcccEEEccCC
Q psy13720 290 LPRKGEVEMLCGGPP 304 (487)
Q Consensus 290 ~p~~~~vd~i~ggpP 304 (487)
++.++.+|+|+..++
T Consensus 219 ~~~~~~fD~Ivs~~~ 233 (480)
T 3b3j_A 219 VSLPEQVDIIISEPM 233 (480)
T ss_dssp CCCSSCEEEEECCCC
T ss_pred CccCCCeEEEEEeCc
Confidence 122357999998665
No 196
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=92.36 E-value=0.19 Score=46.87 Aligned_cols=70 Identities=11% Similarity=0.088 Sum_probs=50.3
Q ss_pred CCCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhC-----CCCceeccchHHHHHHhhchhhhcccccc
Q psy13720 215 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN-----PGCTVFVDDCNKILQRVIDNEVCDDKKQK 289 (487)
Q Consensus 215 ~~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~-----p~~~~~~~di~~~~~~~~~~~~~~~~~~~ 289 (487)
++..++||+-||.|.++.-+...+. .+.++|+++.+++..+.+. ++..+..+|+..
T Consensus 20 ~~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~----------------- 80 (239)
T 1xxl_A 20 RAEHRVLDIGAGAGHTALAFSPYVQ--ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAES----------------- 80 (239)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTB-----------------
T ss_pred CCCCEEEEEccCcCHHHHHHHHhCC--EEEEEECCHHHHHHHHHHHHHcCCCCeEEEeccccc-----------------
Confidence 4567899999999999999988874 6889999999888766553 334445555421
Q ss_pred CCC-CCcccEEEccC
Q psy13720 290 LPR-KGEVEMLCGGP 303 (487)
Q Consensus 290 ~p~-~~~vd~i~ggp 303 (487)
+|. .+.+|+|+...
T Consensus 81 ~~~~~~~fD~v~~~~ 95 (239)
T 1xxl_A 81 LPFPDDSFDIITCRY 95 (239)
T ss_dssp CCSCTTCEEEEEEES
T ss_pred CCCCCCcEEEEEECC
Confidence 222 25789998653
No 197
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=92.28 E-value=0.26 Score=46.97 Aligned_cols=116 Identities=20% Similarity=0.156 Sum_probs=69.8
Q ss_pred CCCCeEeecccCchHHHHHHhhc-CCCcEEEEEcCcHHHHHHHHHhC--------CCCceeccchHHHHHHhhchhhhcc
Q psy13720 215 ARPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMNN--------PGCTVFVDDCNKILQRVIDNEVCDD 285 (487)
Q Consensus 215 ~~~l~~ldLFsG~Gg~s~Gl~~a-G~~~~~~a~e~~~~a~~t~~~N~--------p~~~~~~~di~~~~~~~~~~~~~~~ 285 (487)
...-++||+.||.|.++.-+... |-...++++|+++.+++..+.|. +...+..+|+.+.
T Consensus 98 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~------------ 165 (280)
T 1i9g_A 98 FPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADS------------ 165 (280)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGC------------
T ss_pred CCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhc------------
Confidence 35568999999999999988764 31136899999999888777663 2334455554321
Q ss_pred ccccCCCCCcccEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhhcCCcEEEEecCcchhcccchhHHHHHHHH
Q psy13720 286 KKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRC 365 (487)
Q Consensus 286 ~~~~~p~~~~vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~~~P~~~ilENV~gl~~~~~~~~~~~i~~~ 365 (487)
.++ .+.+|+|+..+|. +. .++.++ .+.++|.-.++=.++.. ..+..++..
T Consensus 166 ---~~~-~~~~D~v~~~~~~----------------~~-~~l~~~---~~~L~pgG~l~~~~~~~------~~~~~~~~~ 215 (280)
T 1i9g_A 166 ---ELP-DGSVDRAVLDMLA----------------PW-EVLDAV---SRLLVAGGVLMVYVATV------TQLSRIVEA 215 (280)
T ss_dssp ---CCC-TTCEEEEEEESSC----------------GG-GGHHHH---HHHEEEEEEEEEEESSH------HHHHHHHHH
T ss_pred ---CCC-CCceeEEEECCcC----------------HH-HHHHHH---HHhCCCCCEEEEEeCCH------HHHHHHHHH
Confidence 111 3468999875441 11 233333 34456765444333332 234556666
Q ss_pred HHh-CCCe
Q psy13720 366 LTQ-IGYQ 372 (487)
Q Consensus 366 l~~-~GY~ 372 (487)
|.+ .||.
T Consensus 216 l~~~~~f~ 223 (280)
T 1i9g_A 216 LRAKQCWT 223 (280)
T ss_dssp HHHHSSBC
T ss_pred HHhcCCcC
Confidence 666 6765
No 198
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=92.26 E-value=0.11 Score=50.36 Aligned_cols=56 Identities=18% Similarity=0.139 Sum_probs=44.7
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCc---EEEEEcCcHHHHHHHHHhC-CCCceeccchHH
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVAR---STWAIEFDSAAATAFKMNN-PGCTVFVDDCNK 272 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~---~~~a~e~~~~a~~t~~~N~-p~~~~~~~di~~ 272 (487)
..-++||+-||.|.++..|...+. . .+.|+|+|+..++..+.++ ++..++++|+.+
T Consensus 42 ~~~~VLEIG~G~G~lt~~La~~~~-~~~~~V~avDid~~~l~~a~~~~~~~v~~i~~D~~~ 101 (279)
T 3uzu_A 42 RGERMVEIGPGLGALTGPVIARLA-TPGSPLHAVELDRDLIGRLEQRFGELLELHAGDALT 101 (279)
T ss_dssp TTCEEEEECCTTSTTHHHHHHHHC-BTTBCEEEEECCHHHHHHHHHHHGGGEEEEESCGGG
T ss_pred CcCEEEEEccccHHHHHHHHHhCC-CcCCeEEEEECCHHHHHHHHHhcCCCcEEEECChhc
Confidence 456899999999999999988764 3 2899999999999888773 445667777654
No 199
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=92.24 E-value=1.5 Score=46.57 Aligned_cols=80 Identities=15% Similarity=0.182 Sum_probs=52.2
Q ss_pred CCCeEeecccCchHHHHHHhhc----C--------------CCcEEEEEcCcHHHHHHHHHhC---C--C-----Cceec
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKS----G--------------VARSTWAIEFDSAAATAFKMNN---P--G-----CTVFV 267 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~a----G--------------~~~~~~a~e~~~~a~~t~~~N~---p--~-----~~~~~ 267 (487)
...+++|.+||.||+...+... + ....++++|+++.+++.-+.|. . . ..+.+
T Consensus 169 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~~ 248 (541)
T 2ar0_A 169 PREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIRL 248 (541)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEEE
T ss_pred CCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeEe
Confidence 4568999999999998776431 1 0125899999999998877662 1 1 23444
Q ss_pred cchHHHHHHhhchhhhccccccCCCCCcccEEEccCCCcCccc
Q psy13720 268 DDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSG 310 (487)
Q Consensus 268 ~di~~~~~~~~~~~~~~~~~~~~p~~~~vd~i~ggpPCq~fS~ 310 (487)
+|.-.. ... ..+.+|+|++-||.-+...
T Consensus 249 gDtL~~------------~~~---~~~~fD~Vv~NPPf~~~~~ 276 (541)
T 2ar0_A 249 GNTLGS------------DGE---NLPKAHIVATNPPFGSAAG 276 (541)
T ss_dssp SCTTSH------------HHH---TSCCEEEEEECCCCTTCSS
T ss_pred CCCccc------------ccc---cccCCeEEEECCCcccccc
Confidence 443211 000 1246999999999876654
No 200
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=92.23 E-value=0.1 Score=51.63 Aligned_cols=46 Identities=26% Similarity=0.224 Sum_probs=37.4
Q ss_pred CCCCeEeecccCchHHHHHHhhc-CCCcEEEEEcCcHHHHHHHHHhC
Q psy13720 215 ARPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMNN 260 (487)
Q Consensus 215 ~~~l~~ldLFsG~Gg~s~Gl~~a-G~~~~~~a~e~~~~a~~t~~~N~ 260 (487)
.+..++||+.||.|.++.-+... |-...++++|+++.+++..+.|.
T Consensus 104 ~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~ 150 (336)
T 2b25_A 104 NPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNY 150 (336)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHH
Confidence 35568999999999999998776 53246899999999988877764
No 201
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=92.11 E-value=0.16 Score=46.30 Aligned_cols=75 Identities=13% Similarity=0.003 Sum_probs=50.8
Q ss_pred CCCeEeecccCchHHHHHHhhcC-CCcEEEEEcCcHHHHHHHHHhC-----CCCceeccchHHHHHHhhchhhhcccccc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSG-VARSTWAIEFDSAAATAFKMNN-----PGCTVFVDDCNKILQRVIDNEVCDDKKQK 289 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG-~~~~~~a~e~~~~a~~t~~~N~-----p~~~~~~~di~~~~~~~~~~~~~~~~~~~ 289 (487)
+..++||+-||.|.++.-+...+ -...+.++|+++.+++.-+.+. ++..+..+|+.. .
T Consensus 77 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~----------------~ 140 (215)
T 2yxe_A 77 PGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTL----------------G 140 (215)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGG----------------C
T ss_pred CCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCccc----------------C
Confidence 55689999999999998887654 1136889999999888776653 233444445421 1
Q ss_pred CCCCCcccEEEccCCCc
Q psy13720 290 LPRKGEVEMLCGGPPCQ 306 (487)
Q Consensus 290 ~p~~~~vd~i~ggpPCq 306 (487)
++..+.+|+|+...++.
T Consensus 141 ~~~~~~fD~v~~~~~~~ 157 (215)
T 2yxe_A 141 YEPLAPYDRIYTTAAGP 157 (215)
T ss_dssp CGGGCCEEEEEESSBBS
T ss_pred CCCCCCeeEEEECCchH
Confidence 12234689999876654
No 202
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=92.11 E-value=0.14 Score=52.42 Aligned_cols=105 Identities=9% Similarity=0.089 Sum_probs=66.3
Q ss_pred cCCCCeEeecccCchHHHHHHh-hcCCCcEEEEEcCcHHHHHHHHHh--------------CCCCceeccchHHHHHHhh
Q psy13720 214 IARPLRCLEVFAGAGGLSRGLD-KSGVARSTWAIEFDSAAATAFKMN--------------NPGCTVFVDDCNKILQRVI 278 (487)
Q Consensus 214 ~~~~l~~ldLFsG~Gg~s~Gl~-~aG~~~~~~a~e~~~~a~~t~~~N--------------~p~~~~~~~di~~~~~~~~ 278 (487)
++..-+++||-||.|.+...+. ..|. .-++++|+++.+++.-+.| .....++++|+.++.-.
T Consensus 171 l~~gd~VLDLGCGtG~l~l~lA~~~g~-~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp~~-- 247 (438)
T 3uwp_A 171 MTDDDLFVDLGSGVGQVVLQVAAATNC-KHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEEWR-- 247 (438)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHCCC-SEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHHHH--
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHCCC-CEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCccc--
Confidence 3566789999999999998875 4576 5689999999877655543 13456677777554100
Q ss_pred chhhhccccccCCCCCcccEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhhcCC--cEEEEecCcc
Q psy13720 279 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRP--RFFLLENVRN 349 (487)
Q Consensus 279 ~~~~~~~~~~~~p~~~~vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~~~P--~~~ilENV~g 349 (487)
..+ +.+|+|+..++| |. .+.+.. +. ++...++| +++++|.+..
T Consensus 248 ---------d~~---~~aDVVf~Nn~~--F~----------pdl~~a-L~---Ei~RvLKPGGrIVssE~f~p 292 (438)
T 3uwp_A 248 ---------ERI---ANTSVIFVNNFA--FG----------PEVDHQ-LK---ERFANMKEGGRIVSSKPFAP 292 (438)
T ss_dssp ---------HHH---HTCSEEEECCTT--CC----------HHHHHH-HH---HHHTTSCTTCEEEESSCSSC
T ss_pred ---------ccc---CCccEEEEcccc--cC----------chHHHH-HH---HHHHcCCCCcEEEEeecccC
Confidence 001 257999988776 32 111222 23 34456777 5677776653
No 203
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=92.07 E-value=0.2 Score=48.73 Aligned_cols=71 Identities=18% Similarity=0.099 Sum_probs=49.9
Q ss_pred CCCCeEeecccCchHHHHHHh--hcCCCcEEEEEcCcHHHHHHHHHhCCC------CceeccchHHHHHHhhchhhhccc
Q psy13720 215 ARPLRCLEVFAGAGGLSRGLD--KSGVARSTWAIEFDSAAATAFKMNNPG------CTVFVDDCNKILQRVIDNEVCDDK 286 (487)
Q Consensus 215 ~~~l~~ldLFsG~Gg~s~Gl~--~aG~~~~~~a~e~~~~a~~t~~~N~p~------~~~~~~di~~~~~~~~~~~~~~~~ 286 (487)
+...++||+.||.|.++..+. ...- ..+.++|+++.+++..+.|... ..++.+|+.+
T Consensus 117 ~~~~~vLDiGcG~G~~~~~la~~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-------------- 181 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLALDYSACPG-VQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWK-------------- 181 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTSCCTTCTT-CEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGG--------------
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCC-CeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhc--------------
Confidence 456789999999999998873 2222 3689999999999988887653 2344555432
Q ss_pred cccCCCCCcccEEEccC
Q psy13720 287 KQKLPRKGEVEMLCGGP 303 (487)
Q Consensus 287 ~~~~p~~~~vd~i~ggp 303 (487)
+|..+.+|+|+...
T Consensus 182 ---~~~~~~fD~v~~~~ 195 (305)
T 3ocj_A 182 ---LDTREGYDLLTSNG 195 (305)
T ss_dssp ---CCCCSCEEEEECCS
T ss_pred ---CCccCCeEEEEECC
Confidence 22236899998644
No 204
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=92.01 E-value=0.2 Score=49.49 Aligned_cols=71 Identities=20% Similarity=0.187 Sum_probs=48.1
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhC-----C-CCceeccchHHHHHHhhchhhhcccccc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN-----P-GCTVFVDDCNKILQRVIDNEVCDDKKQK 289 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~-----p-~~~~~~~di~~~~~~~~~~~~~~~~~~~ 289 (487)
+..++||+.||.|.++.-+..+|. .-++|+|+++ +++..+.+. . ...++.+|+.++ .
T Consensus 38 ~~~~VLDiGcGtG~ls~~la~~g~-~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~---------------~ 100 (328)
T 1g6q_1 38 KDKIVLDVGCGTGILSMFAAKHGA-KHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLEDV---------------H 100 (328)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTCC-SEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTS---------------C
T ss_pred CCCEEEEecCccHHHHHHHHHCCC-CEEEEEChHH-HHHHHHHHHHHcCCCCCEEEEECchhhc---------------c
Confidence 456899999999999999998886 6789999994 444444432 1 234455554321 1
Q ss_pred CCCCCcccEEEccCC
Q psy13720 290 LPRKGEVEMLCGGPP 304 (487)
Q Consensus 290 ~p~~~~vd~i~ggpP 304 (487)
+| .+.+|+|+..++
T Consensus 101 ~~-~~~~D~Ivs~~~ 114 (328)
T 1g6q_1 101 LP-FPKVDIIISEWM 114 (328)
T ss_dssp CS-SSCEEEEEECCC
T ss_pred CC-CCcccEEEEeCc
Confidence 22 247999998765
No 205
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=91.98 E-value=0.28 Score=44.63 Aligned_cols=56 Identities=16% Similarity=0.044 Sum_probs=42.3
Q ss_pred CCCeEeecccCchHHHHHHhhc---CCCcEEEEEcCcHHHHHHHHHhCC------CCceeccchHHH
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKS---GVARSTWAIEFDSAAATAFKMNNP------GCTVFVDDCNKI 273 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~a---G~~~~~~a~e~~~~a~~t~~~N~p------~~~~~~~di~~~ 273 (487)
...++||+.||.|..+..+..+ + ..+.++|+++.+++.-+.|+. ...++.+|..++
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 120 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISIS--SRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGI 120 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTT--CEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHH
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCC--CEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHH
Confidence 4568999999999999998765 4 367899999999888776642 234556666543
No 206
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=91.91 E-value=0.31 Score=46.03 Aligned_cols=52 Identities=17% Similarity=0.200 Sum_probs=41.8
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCCCCceeccch
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDC 270 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p~~~~~~~di 270 (487)
...++||+-||.|.++.-+...|. .+.++|+++.+++..+.+... .....|+
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~~-~~~~~d~ 105 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQERGF--EVVLVDPSKEMLEVAREKGVK-NVVEAKA 105 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTTTC--EEEEEESCHHHHHHHHHHTCS-CEEECCT
T ss_pred CCCeEEEeCCCcCHHHHHHHHcCC--eEEEEeCCHHHHHHHHhhcCC-CEEECcH
Confidence 456899999999999999988885 578999999999988887653 2444454
No 207
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=91.83 E-value=0.64 Score=44.81 Aligned_cols=44 Identities=14% Similarity=0.065 Sum_probs=36.8
Q ss_pred CCCCeEeecccCchHHHHHHhhc-CCCcEEEEEcCcHHHHHHHHHhC
Q psy13720 215 ARPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMNN 260 (487)
Q Consensus 215 ~~~l~~ldLFsG~Gg~s~Gl~~a-G~~~~~~a~e~~~~a~~t~~~N~ 260 (487)
++..++||+-||.|+++.-+... |. .+.++|+++.+++.-+.+.
T Consensus 71 ~~~~~vLDiGcG~G~~~~~la~~~~~--~v~gvD~s~~~~~~a~~~~ 115 (302)
T 3hem_A 71 EPGMTLLDIGCGWGSTMRHAVAEYDV--NVIGLTLSENQYAHDKAMF 115 (302)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCC--EEEEEECCHHHHHHHHHHH
T ss_pred CCcCEEEEeeccCcHHHHHHHHhCCC--EEEEEECCHHHHHHHHHHH
Confidence 45678999999999999998877 74 5889999999888777664
No 208
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=91.69 E-value=0.47 Score=46.84 Aligned_cols=124 Identities=11% Similarity=0.075 Sum_probs=78.3
Q ss_pred CCCeEeecccCchHHHHHHhh--cCCCcEEEEEcCcHHHHHHHHHhCC-----CCceeccchHHHHHHhhchhhhccccc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDK--SGVARSTWAIEFDSAAATAFKMNNP-----GCTVFVDDCNKILQRVIDNEVCDDKKQ 288 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~--aG~~~~~~a~e~~~~a~~t~~~N~p-----~~~~~~~di~~~~~~~~~~~~~~~~~~ 288 (487)
++++||+|-||.|+++.-+.. .+. -+.+||+|+..++.-+.+++ ...++.+|..+++..
T Consensus 89 ~~~rVLdIG~G~G~la~~la~~~p~~--~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~------------ 154 (317)
T 3gjy_A 89 SKLRITHLGGGACTMARYFADVYPQS--RNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAES------------ 154 (317)
T ss_dssp GGCEEEEESCGGGHHHHHHHHHSTTC--EEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHT------------
T ss_pred CCCEEEEEECCcCHHHHHHHHHCCCc--EEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhh------------
Confidence 357899999999999998876 354 46899999999999888875 345778888776421
Q ss_pred cCCCCCcccEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhhcCCcEEEEecCcchhcccchhHHHHHHHHHHh
Q psy13720 289 KLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQ 368 (487)
Q Consensus 289 ~~p~~~~vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~~~P~~~ilENV~gl~~~~~~~~~~~i~~~l~~ 368 (487)
++ .+.+|+|+...+... +. .........+.. +.+.++|.-+++=|+..- .....+..+++.|.+
T Consensus 155 -~~-~~~fDvIi~D~~~~~----~~----~~~L~t~efl~~---~~r~LkpgGvlv~~~~~~---~~~~~~~~~~~tL~~ 218 (317)
T 3gjy_A 155 -FT-PASRDVIIRDVFAGA----IT----PQNFTTVEFFEH---CHRGLAPGGLYVANCGDH---SDLRGAKSELAGMME 218 (317)
T ss_dssp -CC-TTCEEEEEECCSTTS----CC----CGGGSBHHHHHH---HHHHEEEEEEEEEEEEEC---TTCHHHHHHHHHHHH
T ss_pred -cc-CCCCCEEEECCCCcc----cc----chhhhHHHHHHH---HHHhcCCCcEEEEEecCC---cchHHHHHHHHHHHH
Confidence 11 246899987643321 10 000111122222 335678998888777532 222345666777665
Q ss_pred C
Q psy13720 369 I 369 (487)
Q Consensus 369 ~ 369 (487)
.
T Consensus 219 v 219 (317)
T 3gjy_A 219 V 219 (317)
T ss_dssp H
T ss_pred H
Confidence 3
No 209
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=91.65 E-value=0.15 Score=50.71 Aligned_cols=72 Identities=22% Similarity=0.258 Sum_probs=50.5
Q ss_pred CCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhC----CCCceeccchHHHHHHhhchhhhccccccCCC
Q psy13720 217 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN----PGCTVFVDDCNKILQRVIDNEVCDDKKQKLPR 292 (487)
Q Consensus 217 ~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~----p~~~~~~~di~~~~~~~~~~~~~~~~~~~~p~ 292 (487)
.-++|||.||.|.++.-+...+-...+.++|+++.+++.-+.|. ....++.+|+.+ .+
T Consensus 197 ~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~-----------------~~- 258 (343)
T 2pjd_A 197 KGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFS-----------------EV- 258 (343)
T ss_dssp CSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTT-----------------TC-
T ss_pred CCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEccccc-----------------cc-
Confidence 34799999999999999887763125789999999888776654 222333344321 11
Q ss_pred CCcccEEEccCCCc
Q psy13720 293 KGEVEMLCGGPPCQ 306 (487)
Q Consensus 293 ~~~vd~i~ggpPCq 306 (487)
.+.+|+|+..+|..
T Consensus 259 ~~~fD~Iv~~~~~~ 272 (343)
T 2pjd_A 259 KGRFDMIISNPPFH 272 (343)
T ss_dssp CSCEEEEEECCCCC
T ss_pred cCCeeEEEECCCcc
Confidence 34799999998853
No 210
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=91.64 E-value=0.24 Score=47.75 Aligned_cols=44 Identities=23% Similarity=0.157 Sum_probs=38.2
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcC-cHHHHHHHHHhC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEF-DSAAATAFKMNN 260 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~-~~~a~~t~~~N~ 260 (487)
...++|||.||.|.++..+...|. ..++++|+ ++.+++..+.|.
T Consensus 79 ~~~~vLDlG~G~G~~~~~~a~~~~-~~v~~~D~s~~~~~~~a~~n~ 123 (281)
T 3bzb_A 79 AGKTVCELGAGAGLVSIVAFLAGA-DQVVATDYPDPEILNSLESNI 123 (281)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTTC-SEEEEEECSCHHHHHHHHHHH
T ss_pred CCCeEEEecccccHHHHHHHHcCC-CEEEEEeCCCHHHHHHHHHHH
Confidence 445899999999999999988885 57899999 899998887775
No 211
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=91.57 E-value=0.27 Score=47.12 Aligned_cols=42 Identities=21% Similarity=0.113 Sum_probs=36.6
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHh
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMN 259 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N 259 (487)
...++||+-||.|.++.-|...|. .+.++|+++.+++.-+.|
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~ 98 (293)
T 3thr_A 57 GCHRVLDVACGTGVDSIMLVEEGF--SVTSVDASDKMLKYALKE 98 (293)
T ss_dssp TCCEEEETTCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHH
T ss_pred CCCEEEEecCCCCHHHHHHHHCCC--eEEEEECCHHHHHHHHHh
Confidence 456899999999999999999986 678999999998877654
No 212
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=91.55 E-value=0.31 Score=44.00 Aligned_cols=42 Identities=12% Similarity=-0.042 Sum_probs=34.5
Q ss_pred CCeEeecccCchHHHHHHhhc-CCCcEEEEEcCcHHHHHHHHHh
Q psy13720 217 PLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMN 259 (487)
Q Consensus 217 ~l~~ldLFsG~Gg~s~Gl~~a-G~~~~~~a~e~~~~a~~t~~~N 259 (487)
..++||+.||.|.++.-+... +. ..+.++|+++.+++..+.|
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~~~~-~~v~~vD~s~~~~~~a~~~ 108 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIVRPE-AHFTLLDSLGKRVRFLRQV 108 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHCTT-SEEEEEESCHHHHHHHHHH
T ss_pred CCeEEEECCCCCHHHHHHHHHCCC-CEEEEEeCCHHHHHHHHHH
Confidence 458999999999999888765 22 3688999999998887765
No 213
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=91.55 E-value=0.16 Score=46.93 Aligned_cols=75 Identities=19% Similarity=0.163 Sum_probs=49.9
Q ss_pred CCCeEeecccCchHHHHHHhh-cCC-----CcEEEEEcCcHHHHHHHHHhC----------CCCceeccchHHHHHHhhc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDK-SGV-----ARSTWAIEFDSAAATAFKMNN----------PGCTVFVDDCNKILQRVID 279 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~-aG~-----~~~~~a~e~~~~a~~t~~~N~----------p~~~~~~~di~~~~~~~~~ 279 (487)
+..++||+.||.|.++.-+.. .|. ...+.++|+++.+++.-+.|. ++..+..+|+..
T Consensus 84 ~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~------- 156 (227)
T 1r18_A 84 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRK------- 156 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGG-------
T ss_pred CCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCccc-------
Confidence 456899999999999888765 331 026899999999888776653 233344444321
Q ss_pred hhhhccccccCCCCCcccEEEccCCCc
Q psy13720 280 NEVCDDKKQKLPRKGEVEMLCGGPPCQ 306 (487)
Q Consensus 280 ~~~~~~~~~~~p~~~~vd~i~ggpPCq 306 (487)
.++..+.+|+|+.+.++.
T Consensus 157 ---------~~~~~~~fD~I~~~~~~~ 174 (227)
T 1r18_A 157 ---------GYPPNAPYNAIHVGAAAP 174 (227)
T ss_dssp ---------CCGGGCSEEEEEECSCBS
T ss_pred ---------CCCcCCCccEEEECCchH
Confidence 122224689998887764
No 214
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=91.51 E-value=0.3 Score=49.44 Aligned_cols=67 Identities=25% Similarity=0.364 Sum_probs=46.7
Q ss_pred CCeEeecccCchHHHHHHhhcCCCcEEEEEcCcH---HHHHHHHHhCC-C-CceeccchHHHHHHhhchhhhccccccCC
Q psy13720 217 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDS---AAATAFKMNNP-G-CTVFVDDCNKILQRVIDNEVCDDKKQKLP 291 (487)
Q Consensus 217 ~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~---~a~~t~~~N~p-~-~~~~~~di~~~~~~~~~~~~~~~~~~~~p 291 (487)
.-+|||+-||.|-+|+=..++|. +-|+|||.++ .|.+..+.|.- + ..++.+|+.++ .+|
T Consensus 84 ~k~VLDvG~GtGiLs~~Aa~aGA-~~V~ave~s~~~~~a~~~~~~n~~~~~i~~i~~~~~~~---------------~lp 147 (376)
T 4hc4_A 84 GKTVLDVGAGTGILSIFCAQAGA-RRVYAVEASAIWQQAREVVRFNGLEDRVHVLPGPVETV---------------ELP 147 (376)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTC-SEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTC---------------CCS
T ss_pred CCEEEEeCCCccHHHHHHHHhCC-CEEEEEeChHHHHHHHHHHHHcCCCceEEEEeeeeeee---------------cCC
Confidence 34699999999999998889996 7899999985 34444455532 2 34555555432 233
Q ss_pred CCCcccEEEc
Q psy13720 292 RKGEVEMLCG 301 (487)
Q Consensus 292 ~~~~vd~i~g 301 (487)
..+|+|+.
T Consensus 148 --e~~Dvivs 155 (376)
T 4hc4_A 148 --EQVDAIVS 155 (376)
T ss_dssp --SCEEEEEC
T ss_pred --ccccEEEe
Confidence 47999985
No 215
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=91.49 E-value=0.13 Score=49.82 Aligned_cols=41 Identities=27% Similarity=0.323 Sum_probs=36.2
Q ss_pred eEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCC
Q psy13720 219 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP 261 (487)
Q Consensus 219 ~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p 261 (487)
++|||-||.|.++.-|...|. -+.++|+++.+++..+.+..
T Consensus 85 ~vLDlGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~ 125 (299)
T 3g2m_A 85 PVLELAAGMGRLTFPFLDLGW--EVTALELSTSVLAAFRKRLA 125 (299)
T ss_dssp CEEEETCTTTTTHHHHHTTTC--CEEEEESCHHHHHHHHHHHH
T ss_pred cEEEEeccCCHHHHHHHHcCC--eEEEEECCHHHHHHHHHHHh
Confidence 899999999999999998886 47899999999988887654
No 216
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=91.48 E-value=0.2 Score=46.66 Aligned_cols=57 Identities=12% Similarity=0.035 Sum_probs=46.7
Q ss_pred CCCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCC--CCceeccchHHH
Q psy13720 215 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP--GCTVFVDDCNKI 273 (487)
Q Consensus 215 ~~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p--~~~~~~~di~~~ 273 (487)
....++||+-||.|.++.-|...|. .+.++|+++.+++..+.+.+ +....++|+.++
T Consensus 55 ~~~~~vLD~GcG~G~~~~~la~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~ 113 (245)
T 3ggd_A 55 NPELPLIDFACGNGTQTKFLSQFFP--RVIGLDVSKSALEIAAKENTAANISYRLLDGLVP 113 (245)
T ss_dssp CTTSCEEEETCTTSHHHHHHHHHSS--CEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCH
T ss_pred CCCCeEEEEcCCCCHHHHHHHHhCC--CEEEEECCHHHHHHHHHhCcccCceEEECccccc
Confidence 4567899999999999999988886 57899999999999888875 345667777654
No 217
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=91.36 E-value=0.22 Score=47.49 Aligned_cols=43 Identities=14% Similarity=0.113 Sum_probs=36.8
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN 260 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~ 260 (487)
..-.|||+|||.|.........|- -..++|+++.+++.-+.|.
T Consensus 212 ~~~~vlD~f~GsGtt~~~a~~~gr--~~ig~e~~~~~~~~~~~r~ 254 (260)
T 1g60_A 212 PNDLVLDCFMGSGTTAIVAKKLGR--NFIGCDMNAEYVNQANFVL 254 (260)
T ss_dssp TTCEEEESSCTTCHHHHHHHHTTC--EEEEEESCHHHHHHHHHHH
T ss_pred CCCEEEECCCCCCHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHH
Confidence 445799999999999999999994 6789999999998877664
No 218
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=91.27 E-value=0.34 Score=45.78 Aligned_cols=101 Identities=17% Similarity=0.153 Sum_probs=66.6
Q ss_pred CCCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCCCCceeccchHHHHHHhhchhhhccccccCCCCC
Q psy13720 215 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKG 294 (487)
Q Consensus 215 ~~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p~~~~~~~di~~~~~~~~~~~~~~~~~~~~p~~~ 294 (487)
....++||+-||.|.++.-+...|. .+.++|+++..++.-+.+. +.....+|+.++ .++ .+
T Consensus 33 ~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~-~~~~~~~d~~~~---------------~~~-~~ 93 (261)
T 3ege_A 33 PKGSVIADIGAGTGGYSVALANQGL--FVYAVEPSIVMRQQAVVHP-QVEWFTGYAENL---------------ALP-DK 93 (261)
T ss_dssp CTTCEEEEETCTTSHHHHHHHTTTC--EEEEECSCHHHHHSSCCCT-TEEEECCCTTSC---------------CSC-TT
T ss_pred CCCCEEEEEcCcccHHHHHHHhCCC--EEEEEeCCHHHHHHHHhcc-CCEEEECchhhC---------------CCC-CC
Confidence 3567899999999999999988775 5789999998776544433 445555554321 111 35
Q ss_pred cccEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhhcCCcEEEEecCc
Q psy13720 295 EVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVR 348 (487)
Q Consensus 295 ~vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~~~P~~~ilENV~ 348 (487)
.+|+|+.......+ .+ ...++.++.++++ .-.+++++-.+
T Consensus 94 ~fD~v~~~~~l~~~-----------~~-~~~~l~~~~~~Lk--gG~~~~~~~~~ 133 (261)
T 3ege_A 94 SVDGVISILAIHHF-----------SH-LEKSFQEMQRIIR--DGTIVLLTFDI 133 (261)
T ss_dssp CBSEEEEESCGGGC-----------SS-HHHHHHHHHHHBC--SSCEEEEEECG
T ss_pred CEeEEEEcchHhhc-----------cC-HHHHHHHHHHHhC--CcEEEEEEcCC
Confidence 79999876543222 11 2356777777776 55677776543
No 219
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=91.25 E-value=0.19 Score=46.82 Aligned_cols=73 Identities=18% Similarity=0.143 Sum_probs=49.5
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhC-----CCCceeccchHHHHHHhhchhhhccccccC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN-----PGCTVFVDDCNKILQRVIDNEVCDDKKQKL 290 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~-----p~~~~~~~di~~~~~~~~~~~~~~~~~~~~ 290 (487)
..-++||+.||.|.++.-+...+- ..+.++|+++.+++.-+.|. ++..+..+|+. ..+
T Consensus 91 ~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~----------------~~~ 153 (235)
T 1jg1_A 91 PGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGS----------------KGF 153 (235)
T ss_dssp TTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGG----------------GCC
T ss_pred CCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcc----------------cCC
Confidence 456899999999999988877652 35789999999888777664 23334444531 112
Q ss_pred CCCCcccEEEccCCC
Q psy13720 291 PRKGEVEMLCGGPPC 305 (487)
Q Consensus 291 p~~~~vd~i~ggpPC 305 (487)
+..+.+|+|+...++
T Consensus 154 ~~~~~fD~Ii~~~~~ 168 (235)
T 1jg1_A 154 PPKAPYDVIIVTAGA 168 (235)
T ss_dssp GGGCCEEEEEECSBB
T ss_pred CCCCCccEEEECCcH
Confidence 222358999877654
No 220
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=91.25 E-value=0.31 Score=44.36 Aligned_cols=42 Identities=19% Similarity=0.148 Sum_probs=37.0
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHh
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMN 259 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N 259 (487)
...++||+-||.|..+.-|...|+ .+.++|+++.+++..+.+
T Consensus 22 ~~~~vLD~GCG~G~~~~~la~~g~--~V~gvD~S~~~l~~a~~~ 63 (203)
T 1pjz_A 22 PGARVLVPLCGKSQDMSWLSGQGY--HVVGAELSEAAVERYFTE 63 (203)
T ss_dssp TTCEEEETTTCCSHHHHHHHHHCC--EEEEEEECHHHHHHHHHH
T ss_pred CCCEEEEeCCCCcHhHHHHHHCCC--eEEEEeCCHHHHHHHHHH
Confidence 556899999999999999988896 588999999999987765
No 221
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=91.09 E-value=0.26 Score=48.01 Aligned_cols=44 Identities=14% Similarity=0.070 Sum_probs=36.8
Q ss_pred cCCCCeEeecccCchHHHHHHhhc-CCCcEEEEEcCcHHHHHHHHHh
Q psy13720 214 IARPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMN 259 (487)
Q Consensus 214 ~~~~l~~ldLFsG~Gg~s~Gl~~a-G~~~~~~a~e~~~~a~~t~~~N 259 (487)
++..-++||+.||.|.++.-+... |. .+.++|+++.+++..+.|
T Consensus 115 ~~~~~~vLDiGcG~G~~~~~la~~~~~--~v~gvD~s~~~~~~a~~~ 159 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGGSMVMAHRRFGS--RVEGVTLSAAQADFGNRR 159 (312)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCC--EEEEEESCHHHHHHHHHH
T ss_pred CCCCCEEEEecCCCCHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHH
Confidence 345678999999999999998876 75 578999999988877765
No 222
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=90.96 E-value=0.25 Score=44.60 Aligned_cols=69 Identities=19% Similarity=0.290 Sum_probs=48.4
Q ss_pred eEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhC------CCCceeccchHHHHHHhhchhhhccccccCCC
Q psy13720 219 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN------PGCTVFVDDCNKILQRVIDNEVCDDKKQKLPR 292 (487)
Q Consensus 219 ~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~------p~~~~~~~di~~~~~~~~~~~~~~~~~~~~p~ 292 (487)
++||+-||.|.++.-+....- ..+.++|+++.+++..+.+. +......+|+.++ .++
T Consensus 46 ~vLdiG~G~G~~~~~l~~~~~-~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~---------------~~~- 108 (219)
T 3dlc_A 46 TCIDIGSGPGALSIALAKQSD-FSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNI---------------PIE- 108 (219)
T ss_dssp EEEEETCTTSHHHHHHHHHSE-EEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBC---------------SSC-
T ss_pred EEEEECCCCCHHHHHHHHcCC-CeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHC---------------CCC-
Confidence 899999999999999887621 36889999999888777763 2334455554321 122
Q ss_pred CCcccEEEccCC
Q psy13720 293 KGEVEMLCGGPP 304 (487)
Q Consensus 293 ~~~vd~i~ggpP 304 (487)
.+.+|+|+....
T Consensus 109 ~~~~D~v~~~~~ 120 (219)
T 3dlc_A 109 DNYADLIVSRGS 120 (219)
T ss_dssp TTCEEEEEEESC
T ss_pred cccccEEEECch
Confidence 357999987654
No 223
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=90.90 E-value=0.26 Score=47.26 Aligned_cols=70 Identities=11% Similarity=0.090 Sum_probs=50.5
Q ss_pred CCCCeEeecccCchHHHHHHhhc---CCCcEEEEEcCcHHHHHHHHHhCC----CCceeccchHHHHHHhhchhhhcccc
Q psy13720 215 ARPLRCLEVFAGAGGLSRGLDKS---GVARSTWAIEFDSAAATAFKMNNP----GCTVFVDDCNKILQRVIDNEVCDDKK 287 (487)
Q Consensus 215 ~~~l~~ldLFsG~Gg~s~Gl~~a---G~~~~~~a~e~~~~a~~t~~~N~p----~~~~~~~di~~~~~~~~~~~~~~~~~ 287 (487)
.+..++||+-||.|.++.-+... |. .+.++|+++.+++..+.+.. +.....+|+.+
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~--------------- 83 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGYLGLVLMPLLPEGS--KYTGIDSGETLLAEARELFRLLPYDSEFLEGDATE--------------- 83 (284)
T ss_dssp CSCCEEEEETCTTTHHHHHHTTTSCTTC--EEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTT---------------
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCC--EEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhh---------------
Confidence 46678999999999999998776 43 57899999999887777643 23344555432
Q ss_pred ccCCCCCcccEEEccC
Q psy13720 288 QKLPRKGEVEMLCGGP 303 (487)
Q Consensus 288 ~~~p~~~~vd~i~ggp 303 (487)
+|..+.+|+|+...
T Consensus 84 --~~~~~~fD~v~~~~ 97 (284)
T 3gu3_A 84 --IELNDKYDIAICHA 97 (284)
T ss_dssp --CCCSSCEEEEEEES
T ss_pred --cCcCCCeeEEEECC
Confidence 23345799998754
No 224
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=90.77 E-value=0.38 Score=52.77 Aligned_cols=101 Identities=16% Similarity=0.090 Sum_probs=60.6
Q ss_pred CCCeEeecccCchHHHHHHhhc------CCC------------------------------------cEEEEEcCcHHHH
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKS------GVA------------------------------------RSTWAIEFDSAAA 253 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~a------G~~------------------------------------~~~~a~e~~~~a~ 253 (487)
..-+++|.|||.|++....... |+. ..++++|+|+.|+
T Consensus 190 ~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~av 269 (703)
T 3v97_A 190 PGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVI 269 (703)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHHH
T ss_pred CCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHHH
Confidence 4567999999999987654432 110 2589999999999
Q ss_pred HHHHHhCCC------CceeccchHHHHHHhhchhhhccccccCCC-CCcccEEEccCCCcCcccCCccCCcccccchhHH
Q psy13720 254 TAFKMNNPG------CTVFVDDCNKILQRVIDNEVCDDKKQKLPR-KGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSL 326 (487)
Q Consensus 254 ~t~~~N~p~------~~~~~~di~~~~~~~~~~~~~~~~~~~~p~-~~~vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L 326 (487)
+.-+.|.-. ..+..+|+.++ ..|. .+.+|+|+.-||= |.+ -+....-..|
T Consensus 270 ~~A~~N~~~agv~~~i~~~~~D~~~~---------------~~~~~~~~~d~Iv~NPPY------G~R--lg~~~~l~~l 326 (703)
T 3v97_A 270 QRARTNARLAGIGELITFEVKDVAQL---------------TNPLPKGPYGTVLSNPPY------GER--LDSEPALIAL 326 (703)
T ss_dssp HHHHHHHHHTTCGGGEEEEECCGGGC---------------CCSCTTCCCCEEEECCCC------CC-----CCHHHHHH
T ss_pred HHHHHHHHHcCCCCceEEEECChhhC---------------ccccccCCCCEEEeCCCc------ccc--ccchhHHHHH
Confidence 988887421 12333443221 1122 2278999999994 110 0111223456
Q ss_pred HHHHHHHhhhcCC
Q psy13720 327 IVSYLSYCDYYRP 339 (487)
Q Consensus 327 ~~~~l~~v~~~~P 339 (487)
+..+.++++...|
T Consensus 327 y~~l~~~lk~~~~ 339 (703)
T 3v97_A 327 HSLLGRIMKNQFG 339 (703)
T ss_dssp HHHHHHHHHHHCT
T ss_pred HHHHHHHHHhhCC
Confidence 7777777776544
No 225
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=90.55 E-value=0.022 Score=53.93 Aligned_cols=54 Identities=22% Similarity=0.147 Sum_probs=40.7
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCC---CCceeccchH
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP---GCTVFVDDCN 271 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p---~~~~~~~di~ 271 (487)
..-++||+.||.|+++.-+...|. -+.++|+++.+++..+.|.. +..++++|+.
T Consensus 29 ~~~~VLDiG~G~G~~~~~l~~~~~--~v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~~ 85 (245)
T 1yub_A 29 ETDTVYEIGTGKGHLTTKLAKISK--QVTSIELDSHLFNLSSEKLKLNTRVTLIHQDIL 85 (245)
T ss_dssp SSEEEEECSCCCSSCSHHHHHHSS--EEEESSSSCSSSSSSSCTTTTCSEEEECCSCCT
T ss_pred CCCEEEEEeCCCCHHHHHHHHhCC--eEEEEECCHHHHHHHHHHhccCCceEEEECChh
Confidence 456899999999999999988873 68899999988776666542 3344555543
No 226
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=90.51 E-value=0.71 Score=42.88 Aligned_cols=59 Identities=8% Similarity=-0.075 Sum_probs=43.6
Q ss_pred CCCeEeecccCchHHHHHHhhcCC-CcEEEEEcCcHHHHHHHHHhCC------CCceeccchHHHH
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGV-ARSTWAIEFDSAAATAFKMNNP------GCTVFVDDCNKIL 274 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~-~~~~~a~e~~~~a~~t~~~N~p------~~~~~~~di~~~~ 274 (487)
+..++||+.||.|.++.-+....- ...+.++|+++.+++.-+.|+. ...+..+|+.+.+
T Consensus 60 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~ 125 (239)
T 2hnk_A 60 GAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETL 125 (239)
T ss_dssp TCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHH
T ss_pred CcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHH
Confidence 566899999999999998876521 1368899999998887776641 2456677876654
No 227
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=90.21 E-value=0.44 Score=44.48 Aligned_cols=44 Identities=18% Similarity=0.242 Sum_probs=35.8
Q ss_pred CCCCeEeecccCchHHHHHHhhc-CCCcEEEEEcCcHHHHHHHHHhC
Q psy13720 215 ARPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMNN 260 (487)
Q Consensus 215 ~~~l~~ldLFsG~Gg~s~Gl~~a-G~~~~~~a~e~~~~a~~t~~~N~ 260 (487)
.+..++||+-||.|.++.-+... |. .+.++|+++.+++..+.+.
T Consensus 35 ~~~~~VLDiGcG~G~~~~~la~~~~~--~v~gvD~s~~~l~~a~~~~ 79 (256)
T 1nkv_A 35 KPGTRILDLGSGSGEMLCTWARDHGI--TGTGIDMSSLFTAQAKRRA 79 (256)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHTCC--EEEEEESCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCHHHHHHHHhcCC--eEEEEeCCHHHHHHHHHHH
Confidence 45678999999999999888765 64 5699999999888777653
No 228
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=90.10 E-value=0.42 Score=45.15 Aligned_cols=54 Identities=17% Similarity=0.311 Sum_probs=44.0
Q ss_pred CCCeEeecccCchHHHHHHhhc--CCCcEEEEEcCcHHHHHHHHHhCCCCceeccchH
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKS--GVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCN 271 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~a--G~~~~~~a~e~~~~a~~t~~~N~p~~~~~~~di~ 271 (487)
...++||+-||.|.++.-+... |. .+.++|+++.+++.-+.+.++.....+|+.
T Consensus 85 ~~~~vLdiG~G~G~~~~~l~~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~ 140 (269)
T 1p91_A 85 KATAVLDIGCGEGYYTHAFADALPEI--TTFGLDVSKVAIKAAAKRYPQVTFCVASSH 140 (269)
T ss_dssp TCCEEEEETCTTSTTHHHHHHTCTTS--EEEEEESCHHHHHHHHHHCTTSEEEECCTT
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCC--eEEEEeCCHHHHHHHHHhCCCcEEEEcchh
Confidence 4568999999999999888776 53 688999999999998888877666666643
No 229
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=90.06 E-value=0.25 Score=48.10 Aligned_cols=44 Identities=14% Similarity=0.199 Sum_probs=35.7
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN 260 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~ 260 (487)
...++||+-||.|+++.-+...+. ..+.++|+++.+++.-+.+.
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~ 77 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGRI-NKLVCTDIADVSVKQCQQRY 77 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTTC-SEEEEEESCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCcHHHHHHHhcCC-CEEEEEeCCHHHHHHHHHHH
Confidence 456899999999999998887664 57899999999887766553
No 230
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=89.92 E-value=0.61 Score=42.37 Aligned_cols=51 Identities=22% Similarity=0.205 Sum_probs=40.8
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCCCCceeccch
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDC 270 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p~~~~~~~di 270 (487)
...++||+-||.|.++.-+...|. .+.++|+++.+++.-+.+.. .+...|+
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~~~--~~~~~D~~~~~~~~~~~~~~--~~~~~d~ 82 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAIKENGT--RVSGIEAFPEAAEQAKEKLD--HVVLGDI 82 (230)
T ss_dssp TCSEEEEETCTTSHHHHHHHTTTC--EEEEEESSHHHHHHHHTTSS--EEEESCT
T ss_pred CCCcEEEeCCCCCHHHHHHHhcCC--eEEEEeCCHHHHHHHHHhCC--cEEEcch
Confidence 567899999999999999988874 68899999999988777653 3444554
No 231
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=89.89 E-value=0.54 Score=44.10 Aligned_cols=70 Identities=10% Similarity=0.103 Sum_probs=49.8
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhC-----CCCceeccchHHHHHHhhchhhhccccccC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN-----PGCTVFVDDCNKILQRVIDNEVCDDKKQKL 290 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~-----p~~~~~~~di~~~~~~~~~~~~~~~~~~~~ 290 (487)
...++||+-||.|.++.-+...+. .+.++|+++..++.-+.+. ++.....+|+.+ +
T Consensus 37 ~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~-----------------l 97 (260)
T 1vl5_A 37 GNEEVLDVATGGGHVANAFAPFVK--KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQ-----------------M 97 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-C-----------------C
T ss_pred CCCEEEEEeCCCCHHHHHHHHhCC--EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHh-----------------C
Confidence 566899999999999999988874 6889999998887766552 344445555432 2
Q ss_pred CC-CCcccEEEccCC
Q psy13720 291 PR-KGEVEMLCGGPP 304 (487)
Q Consensus 291 p~-~~~vd~i~ggpP 304 (487)
|. .+.+|+|+....
T Consensus 98 ~~~~~~fD~V~~~~~ 112 (260)
T 1vl5_A 98 PFTDERFHIVTCRIA 112 (260)
T ss_dssp CSCTTCEEEEEEESC
T ss_pred CCCCCCEEEEEEhhh
Confidence 22 257999986543
No 232
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=89.68 E-value=0.27 Score=54.32 Aligned_cols=45 Identities=18% Similarity=0.248 Sum_probs=34.4
Q ss_pred CCCeEeecccCchHHHHHHhhcC--C-CcEEEEEcCcHHHHHHH--HHhC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSG--V-ARSTWAIEFDSAAATAF--KMNN 260 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG--~-~~~~~a~e~~~~a~~t~--~~N~ 260 (487)
...+++|.+||.|++...+.... . ...++++|+++.|++.- +.|.
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL 370 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGL 370 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHT
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHH
Confidence 46799999999999988876432 1 13588999999988876 5553
No 233
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=89.67 E-value=0.43 Score=44.70 Aligned_cols=45 Identities=20% Similarity=0.022 Sum_probs=38.6
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN 260 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~ 260 (487)
+.-+++|+.||.|-++..+...|-...++|+|+++.|++.-+.|.
T Consensus 15 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~ 59 (225)
T 3kr9_A 15 QGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNV 59 (225)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH
Confidence 446899999999999999988875357899999999999888773
No 234
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=89.37 E-value=0.47 Score=44.57 Aligned_cols=45 Identities=20% Similarity=-0.008 Sum_probs=38.9
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN 260 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~ 260 (487)
+.-+++|+.||.|-++..+...|-...++|+|+++.|++.-+.|.
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~ 65 (230)
T 3lec_A 21 KGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNV 65 (230)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHH
T ss_pred CCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH
Confidence 456899999999999999988875357899999999999888773
No 235
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=89.37 E-value=0.22 Score=45.11 Aligned_cols=50 Identities=16% Similarity=0.197 Sum_probs=39.0
Q ss_pred CCCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCCCCceeccchHH
Q psy13720 215 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNK 272 (487)
Q Consensus 215 ~~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p~~~~~~~di~~ 272 (487)
++..+||||.||.|+++.-+.+.+. .++|+|+++.+ ..++...+.+|+.+
T Consensus 24 ~~g~~VLDlG~G~G~~s~~la~~~~--~V~gvD~~~~~------~~~~v~~~~~D~~~ 73 (191)
T 3dou_A 24 RKGDAVIEIGSSPGGWTQVLNSLAR--KIISIDLQEME------EIAGVRFIRCDIFK 73 (191)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTTCS--EEEEEESSCCC------CCTTCEEEECCTTS
T ss_pred CCCCEEEEEeecCCHHHHHHHHcCC--cEEEEeccccc------cCCCeEEEEccccC
Confidence 3567899999999999999987753 68899999752 34567777888754
No 236
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=89.31 E-value=0.52 Score=44.42 Aligned_cols=57 Identities=7% Similarity=-0.132 Sum_probs=43.5
Q ss_pred CCCeEeecccCchHHHHHHhhc---CCCcEEEEEcCcHHHHHHHHHhCC------CCceeccchHHHH
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKS---GVARSTWAIEFDSAAATAFKMNNP------GCTVFVDDCNKIL 274 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~a---G~~~~~~a~e~~~~a~~t~~~N~p------~~~~~~~di~~~~ 274 (487)
..-++||+.||.|..+.-+..+ |. .+.++|+++.+++.-+.|+. ...++.+|..+++
T Consensus 79 ~~~~VLeiG~G~G~~~~~la~~~~~~~--~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l 144 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLATALAIPEDG--KILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVL 144 (247)
T ss_dssp TCCEEEEECCGGGHHHHHHHHHSCTTC--EEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHH
T ss_pred CcCEEEEeCCCcCHHHHHHHHhCCCCC--EEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHH
Confidence 4568999999999999988765 43 68899999998887776642 2346677876654
No 237
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=89.31 E-value=0.46 Score=45.10 Aligned_cols=45 Identities=13% Similarity=-0.085 Sum_probs=38.8
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN 260 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~ 260 (487)
+.-+++|+.||.|-++..+...|-...++|+|+++.|++.-+.|.
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~ 65 (244)
T 3gnl_A 21 KNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQV 65 (244)
T ss_dssp SSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHH
T ss_pred CCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH
Confidence 456899999999999999988875357899999999999888873
No 238
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=89.24 E-value=0.6 Score=43.62 Aligned_cols=77 Identities=16% Similarity=-0.002 Sum_probs=52.6
Q ss_pred CCCeEeecccCchHHHHHHhhc---CCCcEEEEEcCcHHHHHHHHHhCC------CCceeccchHHHHHHhhchhhhccc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKS---GVARSTWAIEFDSAAATAFKMNNP------GCTVFVDDCNKILQRVIDNEVCDDK 286 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~a---G~~~~~~a~e~~~~a~~t~~~N~p------~~~~~~~di~~~~~~~~~~~~~~~~ 286 (487)
+.-++||+.||.|+.+.-+..+ + ..+.++|+++..++.-+.|+. ...++.+|..+++.....
T Consensus 70 ~~~~VLeiG~G~G~~~~~la~~~~~~--~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~------- 140 (237)
T 3c3y_A 70 NAKKTIEVGVFTGYSLLLTALSIPDD--GKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQ------- 140 (237)
T ss_dssp TCCEEEEECCTTSHHHHHHHHHSCTT--CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHH-------
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCC--CEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHh-------
Confidence 4568999999999999888765 4 368899999998888777652 244667787765432110
Q ss_pred cccCCCCCcccEEEccC
Q psy13720 287 KQKLPRKGEVEMLCGGP 303 (487)
Q Consensus 287 ~~~~p~~~~vd~i~ggp 303 (487)
... ..+.+|+|+...
T Consensus 141 -~~~-~~~~fD~I~~d~ 155 (237)
T 3c3y_A 141 -GQE-SEGSYDFGFVDA 155 (237)
T ss_dssp -STT-CTTCEEEEEECS
T ss_pred -ccC-CCCCcCEEEECC
Confidence 000 124689998654
No 239
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=89.04 E-value=0.55 Score=43.61 Aligned_cols=59 Identities=14% Similarity=-0.043 Sum_probs=42.9
Q ss_pred CCCeEeecccCchHHHHHHhhcCC-CcEEEEEcCcHHHHHHHHHhC------CCCceeccchHHHH
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGV-ARSTWAIEFDSAAATAFKMNN------PGCTVFVDDCNKIL 274 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~-~~~~~a~e~~~~a~~t~~~N~------p~~~~~~~di~~~~ 274 (487)
..-++||+-||.|..+.-+..+-- ...+.++|+++.+++.-+.|+ +...+..+|..+.+
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l 137 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATL 137 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHH
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHH
Confidence 456899999999999998876511 126899999999888777664 12456677776543
No 240
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=88.75 E-value=0.49 Score=50.24 Aligned_cols=77 Identities=14% Similarity=0.185 Sum_probs=50.1
Q ss_pred CCCeEeecccCchHHHHHHhhc----CCCcEEEEEcCcHHHHHHHHHhC--CC-----CceeccchHHHHHHhhchhhhc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKS----GVARSTWAIEFDSAAATAFKMNN--PG-----CTVFVDDCNKILQRVIDNEVCD 284 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~a----G~~~~~~a~e~~~~a~~t~~~N~--p~-----~~~~~~di~~~~~~~~~~~~~~ 284 (487)
...+++|.+||.|||-..+... +- ..++++|+++.+...-+.|. .+ ..+.++|. ..
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~-~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDt------------L~ 287 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQT-VVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADT------------LD 287 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTT-CEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCT------------TT
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccC-ceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecce------------ec
Confidence 5678999999999987766432 22 47899999999998877762 11 12333332 11
Q ss_pred cccccCCCCCcccEEEccCCCc
Q psy13720 285 DKKQKLPRKGEVEMLCGGPPCQ 306 (487)
Q Consensus 285 ~~~~~~p~~~~vd~i~ggpPCq 306 (487)
..-... ..+.+|+|++-||=.
T Consensus 288 ~d~p~~-~~~~fD~IvaNPPf~ 308 (542)
T 3lkd_A 288 EDWPTQ-EPTNFDGVLMNPPYS 308 (542)
T ss_dssp SCSCCS-SCCCBSEEEECCCTT
T ss_pred cccccc-ccccccEEEecCCcC
Confidence 100001 135799999999975
No 241
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=88.49 E-value=0.54 Score=45.10 Aligned_cols=43 Identities=26% Similarity=0.280 Sum_probs=35.6
Q ss_pred CCCCeEeecccCchHHHHHHhhc-CCCcEEEEEcCcHHHHHHHHHh
Q psy13720 215 ARPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMN 259 (487)
Q Consensus 215 ~~~l~~ldLFsG~Gg~s~Gl~~a-G~~~~~~a~e~~~~a~~t~~~N 259 (487)
....++||+-||.|.++.-+... |. .+.++|+++.+++.-+.+
T Consensus 81 ~~~~~vLDiGcG~G~~~~~l~~~~~~--~v~gvD~s~~~~~~a~~~ 124 (297)
T 2o57_A 81 QRQAKGLDLGAGYGGAARFLVRKFGV--SIDCLNIAPVQNKRNEEY 124 (297)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCC--EEEEEESCHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCC--EEEEEeCCHHHHHHHHHH
Confidence 45678999999999999988776 75 578999999988776654
No 242
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=87.81 E-value=0.89 Score=44.11 Aligned_cols=44 Identities=11% Similarity=0.086 Sum_probs=36.6
Q ss_pred CCCCeEeecccCchHHHHHHhhc-CCCcEEEEEcCcHHHHHHHHHhC
Q psy13720 215 ARPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMNN 260 (487)
Q Consensus 215 ~~~l~~ldLFsG~Gg~s~Gl~~a-G~~~~~~a~e~~~~a~~t~~~N~ 260 (487)
.+..++||+-||.|+++.-+... |. .+.++|+++.+++.-+.+.
T Consensus 89 ~~~~~vLDiGcG~G~~~~~la~~~~~--~v~gvD~s~~~~~~a~~~~ 133 (318)
T 2fk8_A 89 KPGMTLLDIGCGWGTTMRRAVERFDV--NVIGLTLSKNQHARCEQVL 133 (318)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCC--EEEEEESCHHHHHHHHHHH
T ss_pred CCcCEEEEEcccchHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHH
Confidence 35668999999999999888776 75 6789999999888777664
No 243
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=87.70 E-value=1.2 Score=42.40 Aligned_cols=44 Identities=16% Similarity=0.080 Sum_probs=35.9
Q ss_pred CCCCeEeecccCchHHHHHHh-hcCCCcEEEEEcCcHHHHHHHHHhC
Q psy13720 215 ARPLRCLEVFAGAGGLSRGLD-KSGVARSTWAIEFDSAAATAFKMNN 260 (487)
Q Consensus 215 ~~~l~~ldLFsG~Gg~s~Gl~-~aG~~~~~~a~e~~~~a~~t~~~N~ 260 (487)
++..++||+-||.|+++.-+. ..|. .+.++|+++.+++.-+.+.
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~~~--~v~gvd~s~~~~~~a~~~~ 107 (287)
T 1kpg_A 63 QPGMTLLDVGCGWGATMMRAVEKYDV--NVVGLTLSKNQANHVQQLV 107 (287)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCC--EEEEEESCHHHHHHHHHHH
T ss_pred CCcCEEEEECCcccHHHHHHHHHcCC--EEEEEECCHHHHHHHHHHH
Confidence 456789999999999998886 5575 6789999999888777653
No 244
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=87.39 E-value=0.83 Score=40.99 Aligned_cols=70 Identities=14% Similarity=0.066 Sum_probs=46.4
Q ss_pred CCCeEeecccCchHHHH-HHhhcCCCcEEEEEcCcHHHHHHHHHh----CCCCceeccchHHHHHHhhchhhhccccccC
Q psy13720 216 RPLRCLEVFAGAGGLSR-GLDKSGVARSTWAIEFDSAAATAFKMN----NPGCTVFVDDCNKILQRVIDNEVCDDKKQKL 290 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~-Gl~~aG~~~~~~a~e~~~~a~~t~~~N----~p~~~~~~~di~~~~~~~~~~~~~~~~~~~~ 290 (487)
...++||+-||.|.++. -+...|. .+.++|+++.+++..+.+ .+......+|+.++ .+
T Consensus 23 ~~~~vLDiGcG~G~~~~~~~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~---------------~~ 85 (209)
T 2p8j_A 23 LDKTVLDCGAGGDLPPLSIFVEDGY--KTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKL---------------PF 85 (209)
T ss_dssp SCSEEEEESCCSSSCTHHHHHHTTC--EEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSC---------------CS
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCC--EEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhC---------------CC
Confidence 45689999999988743 4455675 578999999988876654 24455555554321 11
Q ss_pred CCCCcccEEEccC
Q psy13720 291 PRKGEVEMLCGGP 303 (487)
Q Consensus 291 p~~~~vd~i~ggp 303 (487)
+ .+.+|+|+...
T Consensus 86 ~-~~~fD~v~~~~ 97 (209)
T 2p8j_A 86 K-DESMSFVYSYG 97 (209)
T ss_dssp C-TTCEEEEEECS
T ss_pred C-CCceeEEEEcC
Confidence 1 34789998653
No 245
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=87.36 E-value=0.32 Score=46.36 Aligned_cols=67 Identities=21% Similarity=0.195 Sum_probs=48.1
Q ss_pred CCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCCCCceeccchHHHHHHhhchhhhccccccCCCCCcc
Q psy13720 217 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEV 296 (487)
Q Consensus 217 ~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p~~~~~~~di~~~~~~~~~~~~~~~~~~~~p~~~~v 296 (487)
+-++|||=||.|.++..|...|. -+.++|+++..++.-+ .+++.....+|..++ .++ .+.+
T Consensus 40 ~~~vLDvGcGtG~~~~~l~~~~~--~v~gvD~s~~ml~~a~-~~~~v~~~~~~~e~~---------------~~~-~~sf 100 (257)
T 4hg2_A 40 RGDALDCGCGSGQASLGLAEFFE--RVHAVDPGEAQIRQAL-RHPRVTYAVAPAEDT---------------GLP-PASV 100 (257)
T ss_dssp SSEEEEESCTTTTTHHHHHTTCS--EEEEEESCHHHHHTCC-CCTTEEEEECCTTCC---------------CCC-SSCE
T ss_pred CCCEEEEcCCCCHHHHHHHHhCC--EEEEEeCcHHhhhhhh-hcCCceeehhhhhhh---------------ccc-CCcc
Confidence 34799999999999999998885 5789999998876533 455655555554321 122 3579
Q ss_pred cEEEcc
Q psy13720 297 EMLCGG 302 (487)
Q Consensus 297 d~i~gg 302 (487)
|+|+.+
T Consensus 101 D~v~~~ 106 (257)
T 4hg2_A 101 DVAIAA 106 (257)
T ss_dssp EEEEEC
T ss_pred cEEEEe
Confidence 999863
No 246
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=87.14 E-value=0.63 Score=51.68 Aligned_cols=43 Identities=9% Similarity=0.090 Sum_probs=36.2
Q ss_pred CCCeEeecccCchHHHHHHhhcC-CCcEEEEEcCcHHHHHHHHH
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSG-VARSTWAIEFDSAAATAFKM 258 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG-~~~~~~a~e~~~~a~~t~~~ 258 (487)
...++|||-||.|.++..|...| -..-++++|+++.+++.-+.
T Consensus 721 ~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~ARe 764 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAK 764 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHH
Confidence 56789999999999999998877 11368999999999887765
No 247
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=86.87 E-value=0.21 Score=47.04 Aligned_cols=79 Identities=6% Similarity=-0.002 Sum_probs=50.8
Q ss_pred CCCeEeecccCchHHHHHHhhcC-CCcEEEEEcCcHHHHHHHHHhC------CCCceeccchHHHHHHhhchhhhccccc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSG-VARSTWAIEFDSAAATAFKMNN------PGCTVFVDDCNKILQRVIDNEVCDDKKQ 288 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG-~~~~~~a~e~~~~a~~t~~~N~------p~~~~~~~di~~~~~~~~~~~~~~~~~~ 288 (487)
+.-++||+.||.|..++-+..+- -.-.+.++|+++.+++.-+.|+ ....++.+|..+++...... +
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~------~- 132 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNE------G- 132 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHH------H-
T ss_pred CcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhc------c-
Confidence 45689999999999999887641 0136899999987655444332 24567788887764322100 0
Q ss_pred cCCCCCcccEEEccCC
Q psy13720 289 KLPRKGEVEMLCGGPP 304 (487)
Q Consensus 289 ~~p~~~~vd~i~ggpP 304 (487)
..+.+|+|+...+
T Consensus 133 ---~~~~fD~V~~d~~ 145 (242)
T 3r3h_A 133 ---GEHQFDFIFIDAD 145 (242)
T ss_dssp ---CSSCEEEEEEESC
T ss_pred ---CCCCEeEEEEcCC
Confidence 0246899986543
No 248
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=86.70 E-value=0.67 Score=41.46 Aligned_cols=50 Identities=10% Similarity=0.043 Sum_probs=35.9
Q ss_pred CCCeEeecccCchHHHHHHhhc-C--CCcEEEEEcCcHHHHHHHHHhCCCCceeccchHH
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKS-G--VARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNK 272 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~a-G--~~~~~~a~e~~~~a~~t~~~N~p~~~~~~~di~~ 272 (487)
+..++|||.||.|+++.-+... + - ..++|+|+++.+ ..++.....+|+.+
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~~~~~~~~-~~v~gvD~s~~~------~~~~v~~~~~d~~~ 74 (201)
T 2plw_A 22 KNKIILDIGCYPGSWCQVILERTKNYK-NKIIGIDKKIMD------PIPNVYFIQGEIGK 74 (201)
T ss_dssp TTEEEEEESCTTCHHHHHHHHHTTTSC-EEEEEEESSCCC------CCTTCEEEECCTTT
T ss_pred CCCEEEEeCCCCCHHHHHHHHHcCCCC-ceEEEEeCCccC------CCCCceEEEccccc
Confidence 4568999999999999988654 2 2 368999999842 23455566666643
No 249
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=86.36 E-value=0.61 Score=44.58 Aligned_cols=135 Identities=8% Similarity=-0.093 Sum_probs=79.4
Q ss_pred CCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCCC---------CceeccchHHHHHHhhchhhhcccc
Q psy13720 217 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPG---------CTVFVDDCNKILQRVIDNEVCDDKK 287 (487)
Q Consensus 217 ~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p~---------~~~~~~di~~~~~~~~~~~~~~~~~ 287 (487)
+-++||+-||.|+++.-+...| ..+.++|+|+..++.-+.+++. ..++.+|..
T Consensus 73 ~~~VL~iG~G~G~~~~~ll~~~--~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~---------------- 134 (262)
T 2cmg_A 73 LKEVLIVDGFDLELAHQLFKYD--THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLD---------------- 134 (262)
T ss_dssp CCEEEEESSCCHHHHHHHTTSS--CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGG----------------
T ss_pred CCEEEEEeCCcCHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHH----------------
Confidence 4589999999999998877665 5788999999999887777643 122222221
Q ss_pred ccCCCCCcccEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhhcCCcEEEEecCcchhcccchhHHHHHHHHHH
Q psy13720 288 QKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLT 367 (487)
Q Consensus 288 ~~~p~~~~vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~~~P~~~ilENV~gl~~~~~~~~~~~i~~~l~ 367 (487)
... +.+|+|+...+ ++.. .+ -.+.+.++|.-+++=+...... ....+..+.+.+.
T Consensus 135 -~~~--~~fD~Ii~d~~----------------dp~~-~~---~~~~~~L~pgG~lv~~~~~~~~--~~~~~~~~~~~l~ 189 (262)
T 2cmg_A 135 -LDI--KKYDLIFCLQE----------------PDIH-RI---DGLKRMLKEDGVFISVAKHPLL--EHVSMQNALKNMG 189 (262)
T ss_dssp -SCC--CCEEEEEESSC----------------CCHH-HH---HHHHTTEEEEEEEEEEEECTTT--CHHHHHHHHHHHH
T ss_pred -HHH--hhCCEEEECCC----------------ChHH-HH---HHHHHhcCCCcEEEEEcCCccc--CHHHHHHHHHHHH
Confidence 111 47899987521 1111 22 2445667898766654322111 1234666777776
Q ss_pred hCCCeeEEEEEeccCCCCCCcccEEEEEEEcC
Q psy13720 368 QIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAP 399 (487)
Q Consensus 368 ~~GY~~~~~~l~a~~yGvPQ~R~R~fiia~~~ 399 (487)
+.-=.+. + ..--+|-.-...|++|++.
T Consensus 190 ~~F~~~~---~--~~~~vP~~g~~~~~~as~~ 216 (262)
T 2cmg_A 190 GVFSVAM---P--FVAPLRILSNKGYIYASFK 216 (262)
T ss_dssp TTCSEEE---E--ECCTTCTTCCEEEEEEESS
T ss_pred HhCCceE---E--EEEccCCCcccEEEEeeCC
Confidence 5421111 1 1122455445668888764
No 250
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=86.32 E-value=1.1 Score=44.22 Aligned_cols=47 Identities=9% Similarity=0.050 Sum_probs=39.1
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCCCCc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCT 264 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p~~~ 264 (487)
+.=.|||.|||.|.......+.|- -..++|+++.+++.-+.+...+.
T Consensus 252 ~~~~VlDpF~GsGtt~~aa~~~gr--~~ig~e~~~~~~~~~~~r~~~~~ 298 (323)
T 1boo_A 252 PDDLVVDIFGGSNTTGLVAERESR--KWISFEMKPEYVAASAFRFLDNN 298 (323)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTC--EEEEEESCHHHHHHHHGGGSCSC
T ss_pred CCCEEEECCCCCCHHHHHHHHcCC--CEEEEeCCHHHHHHHHHHHHhcc
Confidence 345699999999999999999994 57799999999998888765443
No 251
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=86.31 E-value=12 Score=39.37 Aligned_cols=41 Identities=24% Similarity=0.258 Sum_probs=31.4
Q ss_pred eEeecccCchHHHHHHhh--------cC-------CCcEEEEEcCcHHHHHHHHHh
Q psy13720 219 RCLEVFAGAGGLSRGLDK--------SG-------VARSTWAIEFDSAAATAFKMN 259 (487)
Q Consensus 219 ~~ldLFsG~Gg~s~Gl~~--------aG-------~~~~~~a~e~~~~a~~t~~~N 259 (487)
+++|.+||.|||-..+.. .+ ....++++|+++.++..-+.|
T Consensus 247 ~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~N 302 (544)
T 3khk_A 247 RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMN 302 (544)
T ss_dssp EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHH
T ss_pred eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHH
Confidence 899999999999776521 11 013689999999999887776
No 252
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=85.91 E-value=1.2 Score=40.62 Aligned_cols=46 Identities=13% Similarity=-0.074 Sum_probs=37.8
Q ss_pred CCCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhC
Q psy13720 215 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN 260 (487)
Q Consensus 215 ~~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~ 260 (487)
...-++|||=||.|.+++.+....-.-.++|+|+|+.+++.-+.|.
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~ 93 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSII 93 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHH
T ss_pred CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHH
Confidence 3566899999999999999866521138999999999999988875
No 253
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=85.36 E-value=5.5 Score=38.57 Aligned_cols=42 Identities=17% Similarity=0.354 Sum_probs=33.7
Q ss_pred CCCCeEeecccCchHHHHHHhhc--CCCcEEEEEcCcHHHHHHHHHh
Q psy13720 215 ARPLRCLEVFAGAGGLSRGLDKS--GVARSTWAIEFDSAAATAFKMN 259 (487)
Q Consensus 215 ~~~l~~ldLFsG~Gg~s~Gl~~a--G~~~~~~a~e~~~~a~~t~~~N 259 (487)
....+++|+-||.|.++..+... +. .+.++|++ .+++.-+.+
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~--~~~~~D~~-~~~~~a~~~ 207 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNA--EIFGVDWA-SVLEVAKEN 207 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTC--EEEEEECH-HHHHHHHHH
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCC--eEEEEecH-HHHHHHHHH
Confidence 35679999999999999988776 43 57899999 777766655
No 254
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=85.22 E-value=0.34 Score=44.17 Aligned_cols=40 Identities=18% Similarity=0.154 Sum_probs=32.2
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHH
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATA 255 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t 255 (487)
...++||+-||.|.++.-+...+-...+.++|+++.+++.
T Consensus 27 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~ 66 (218)
T 3mq2_A 27 YDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEK 66 (218)
T ss_dssp SSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHH
T ss_pred CCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHH
Confidence 5678999999999999999877311468999999986554
No 255
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=85.16 E-value=0.39 Score=44.98 Aligned_cols=46 Identities=13% Similarity=0.289 Sum_probs=38.3
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCCC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPG 262 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p~ 262 (487)
...++|||-||.|+++.-+.+.|. ..++|+|+++.+++.-+.+.+.
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~g~-~~V~gvDis~~ml~~a~~~~~~ 82 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQNGA-KLVYALDVGTNQLAWKIRSDER 82 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC-SEEEEECSSCCCCCHHHHTCTT
T ss_pred CCCEEEEEccCCCHHHHHHHhcCC-CEEEEEcCCHHHHHHHHHhCcc
Confidence 456899999999999999988886 5789999999887765666654
No 256
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=84.78 E-value=0.89 Score=43.17 Aligned_cols=54 Identities=17% Similarity=0.145 Sum_probs=42.0
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCc-EEEEEcCcHHHHHHHHHhCC---CCceeccchHH
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVAR-STWAIEFDSAAATAFKMNNP---GCTVFVDDCNK 272 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~-~~~a~e~~~~a~~t~~~N~p---~~~~~~~di~~ 272 (487)
..-++||+=||.|.++. +.. +. + .+.|+|+|+..++..+.+.. +..++++|+.+
T Consensus 21 ~~~~VLEIG~G~G~lt~-l~~-~~-~~~v~avEid~~~~~~a~~~~~~~~~v~~i~~D~~~ 78 (252)
T 1qyr_A 21 KGQAMVEIGPGLAALTE-PVG-ER-LDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMT 78 (252)
T ss_dssp TTCCEEEECCTTTTTHH-HHH-TT-CSCEEEECCCHHHHHHHHTCTTTGGGEEEECSCGGG
T ss_pred CcCEEEEECCCCcHHHH-hhh-CC-CCeEEEEECCHHHHHHHHHHhccCCceEEEECchhh
Confidence 44579999999999999 865 32 2 27899999999999888764 45567777654
No 257
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=84.43 E-value=1.9 Score=40.39 Aligned_cols=43 Identities=19% Similarity=0.158 Sum_probs=35.0
Q ss_pred CCCCeEeecccCchHHHHHHhhc-CCCcEEEEEcCcHHHHHHHHHh
Q psy13720 215 ARPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMN 259 (487)
Q Consensus 215 ~~~l~~ldLFsG~Gg~s~Gl~~a-G~~~~~~a~e~~~~a~~t~~~N 259 (487)
....++||+-||.|.++.-+... |. .+.++|+++.+++..+.+
T Consensus 60 ~~~~~vLDiGcG~G~~~~~l~~~~~~--~v~gvD~s~~~~~~a~~~ 103 (273)
T 3bus_A 60 RSGDRVLDVGCGIGKPAVRLATARDV--RVTGISISRPQVNQANAR 103 (273)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHSCC--EEEEEESCHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHhcCC--EEEEEeCCHHHHHHHHHH
Confidence 35678999999999999888764 53 688999999988776655
No 258
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=84.07 E-value=2.6 Score=40.65 Aligned_cols=54 Identities=20% Similarity=0.234 Sum_probs=41.8
Q ss_pred CCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCC--CCceeccchHHH
Q psy13720 217 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP--GCTVFVDDCNKI 273 (487)
Q Consensus 217 ~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p--~~~~~~~di~~~ 273 (487)
.-.++|.-||.||-|..+-..+. .++|+|.|+.|++.-+. .. ....+.++..++
T Consensus 23 gg~~VD~T~G~GGHS~~il~~~g--~VigiD~Dp~Ai~~A~~-L~~~rv~lv~~~f~~l 78 (285)
T 1wg8_A 23 GGVYVDATLGGAGHARGILERGG--RVIGLDQDPEAVARAKG-LHLPGLTVVQGNFRHL 78 (285)
T ss_dssp TCEEEETTCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHH-TCCTTEEEEESCGGGH
T ss_pred CCEEEEeCCCCcHHHHHHHHCCC--EEEEEeCCHHHHHHHHh-hccCCEEEEECCcchH
Confidence 34799999999999999987753 68999999999987766 53 345566666554
No 259
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=83.53 E-value=1.3 Score=43.09 Aligned_cols=43 Identities=14% Similarity=-0.011 Sum_probs=33.7
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHh
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMN 259 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N 259 (487)
...++|||-||.|+...-+...|. ..+.++|+++.+++.-+..
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~-~~v~GiD~S~~~l~~A~~~ 90 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEI-ALLVATDPDADAIARGNER 90 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTC-SEEEEEESCHHHHHHHHHH
T ss_pred CCCeEEEEecCCcHhHHHHHhcCC-CeEEEEECCHHHHHHHHHH
Confidence 356899999999986666666665 4689999999988876654
No 260
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=83.31 E-value=6.2 Score=35.36 Aligned_cols=124 Identities=14% Similarity=0.135 Sum_probs=72.2
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCCCCceeccchHHHHHHhhchhhhccccccCCCCCc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGE 295 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p~~~~~~~di~~~~~~~~~~~~~~~~~~~~p~~~~ 295 (487)
...++||+-||.|.++.-+ +. .+.++|+++. ...+...|+.++ .++ .+.
T Consensus 67 ~~~~vLDiG~G~G~~~~~l---~~--~v~~~D~s~~----------~~~~~~~d~~~~---------------~~~-~~~ 115 (215)
T 2zfu_A 67 ASLVVADFGCGDCRLASSI---RN--PVHCFDLASL----------DPRVTVCDMAQV---------------PLE-DES 115 (215)
T ss_dssp TTSCEEEETCTTCHHHHHC---CS--CEEEEESSCS----------STTEEESCTTSC---------------SCC-TTC
T ss_pred CCCeEEEECCcCCHHHHHh---hc--cEEEEeCCCC----------CceEEEeccccC---------------CCC-CCC
Confidence 4568999999999987766 32 4789999977 234455554321 111 346
Q ss_pred ccEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhhcCCc--EEEEecCcchhcccchhHHHHHHHHHHhCCCee
Q psy13720 296 VEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPR--FFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQC 373 (487)
Q Consensus 296 vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~~~P~--~~ilENV~gl~~~~~~~~~~~i~~~l~~~GY~~ 373 (487)
+|+|+....-. ..+ ...++.++. +.++|. +++.|-...+. ....+...|.+.|+.+
T Consensus 116 fD~v~~~~~l~------------~~~-~~~~l~~~~---~~L~~gG~l~i~~~~~~~~------~~~~~~~~l~~~Gf~~ 173 (215)
T 2zfu_A 116 VDVAVFCLSLM------------GTN-IRDFLEEAN---RVLKPGGLLKVAEVSSRFE------DVRTFLRAVTKLGFKI 173 (215)
T ss_dssp EEEEEEESCCC------------SSC-HHHHHHHHH---HHEEEEEEEEEEECGGGCS------CHHHHHHHHHHTTEEE
T ss_pred EeEEEEehhcc------------ccC-HHHHHHHHH---HhCCCCeEEEEEEcCCCCC------CHHHHHHHHHHCCCEE
Confidence 89998643321 011 123444443 445674 45555443221 3467788888999987
Q ss_pred EEEEEeccCCCCCCcccEEEEEEEcCC
Q psy13720 374 TFGTLQAGHFGVSQTRRRAIVLAAAPG 400 (487)
Q Consensus 374 ~~~~l~a~~yGvPQ~R~R~fiia~~~~ 400 (487)
........ ..+++++.+.+
T Consensus 174 ~~~~~~~~--------~~~~~~~~k~~ 192 (215)
T 2zfu_A 174 VSKDLTNS--------HFFLFDFQKTG 192 (215)
T ss_dssp EEEECCST--------TCEEEEEEECS
T ss_pred EEEecCCC--------eEEEEEEEecC
Confidence 66433222 23667777654
No 261
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=83.00 E-value=1.7 Score=43.64 Aligned_cols=79 Identities=9% Similarity=0.080 Sum_probs=52.6
Q ss_pred CCCCeEeecccCchHHHHHHhhc-CCCcEEEEEcCcHHHHHHHHHhC-------------CCCceeccchHHHHHHhhch
Q psy13720 215 ARPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMNN-------------PGCTVFVDDCNKILQRVIDN 280 (487)
Q Consensus 215 ~~~l~~ldLFsG~Gg~s~Gl~~a-G~~~~~~a~e~~~~a~~t~~~N~-------------p~~~~~~~di~~~~~~~~~~ 280 (487)
.+..++|||-||.|.++.-+... |-.-.+.++|+++.+++.-+.|. ++.....+|+.++.
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~------ 155 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLA------ 155 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGG------
T ss_pred CCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhh------
Confidence 46679999999999999888654 11136889999999998887763 45556666665431
Q ss_pred hhhccccccCCCCCcccEEEccC
Q psy13720 281 EVCDDKKQKLPRKGEVEMLCGGP 303 (487)
Q Consensus 281 ~~~~~~~~~~p~~~~vd~i~ggp 303 (487)
......++ .+.+|+|+...
T Consensus 156 ---~~~~~~~~-~~~fD~V~~~~ 174 (383)
T 4fsd_A 156 ---TAEPEGVP-DSSVDIVISNC 174 (383)
T ss_dssp ---GCBSCCCC-TTCEEEEEEES
T ss_pred ---hcccCCCC-CCCEEEEEEcc
Confidence 00000122 35799998753
No 262
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=82.99 E-value=1.8 Score=40.14 Aligned_cols=57 Identities=16% Similarity=0.201 Sum_probs=43.2
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCCC----CceeccchHHH
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPG----CTVFVDDCNKI 273 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p~----~~~~~~di~~~ 273 (487)
...+|||+=||.|..+.-+...+. .-+.++|+++..++..+.+... ..++.+|..++
T Consensus 60 ~G~rVLdiG~G~G~~~~~~~~~~~-~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~ 120 (236)
T 3orh_A 60 KGGRVLEVGFGMAIAASKVQEAPI-DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDV 120 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHTTSCE-EEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHH
T ss_pred CCCeEEEECCCccHHHHHHHHhCC-cEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhh
Confidence 567899999999999988877664 5678999999998888776532 33455666554
No 263
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=82.44 E-value=0.15 Score=49.01 Aligned_cols=34 Identities=15% Similarity=0.088 Sum_probs=28.1
Q ss_pred CCCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHH
Q psy13720 215 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSA 251 (487)
Q Consensus 215 ~~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~ 251 (487)
++..++|||-||.||++.-+.+.| .+.|+|+++.
T Consensus 73 ~~g~~VLDlGcGtG~~s~~la~~~---~V~gvD~s~m 106 (265)
T 2oxt_A 73 ELTGRVVDLGCGRGGWSYYAASRP---HVMDVRAYTL 106 (265)
T ss_dssp CCCEEEEEESCTTSHHHHHHHTST---TEEEEEEECC
T ss_pred CCCCEEEEeCcCCCHHHHHHHHcC---cEEEEECchh
Confidence 356789999999999999887763 4789999974
No 264
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=82.26 E-value=1.1 Score=40.71 Aligned_cols=46 Identities=20% Similarity=0.194 Sum_probs=36.1
Q ss_pred CCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCCCCceeccch
Q psy13720 217 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDC 270 (487)
Q Consensus 217 ~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p~~~~~~~di 270 (487)
..++||+-||.|.++..+... .++|+++.+++..+.+ +..+...|+
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~------~~vD~s~~~~~~a~~~--~~~~~~~d~ 93 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK------IGVEPSERMAEIARKR--GVFVLKGTA 93 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC------EEEESCHHHHHHHHHT--TCEEEECBT
T ss_pred CCcEEEeCCCCCHHHHHHHHH------hccCCCHHHHHHHHhc--CCEEEEccc
Confidence 457999999999998877543 8999999999988877 445555554
No 265
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=82.03 E-value=0.25 Score=47.77 Aligned_cols=34 Identities=9% Similarity=-0.008 Sum_probs=28.1
Q ss_pred CCCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHH
Q psy13720 215 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSA 251 (487)
Q Consensus 215 ~~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~ 251 (487)
++..++|||-||.|+++.-+.+.| .+.|+|+++.
T Consensus 81 ~~g~~VLDlGcGtG~~s~~la~~~---~V~gVD~s~m 114 (276)
T 2wa2_A 81 ELKGTVVDLGCGRGSWSYYAASQP---NVREVKAYTL 114 (276)
T ss_dssp CCCEEEEEESCTTCHHHHHHHTST---TEEEEEEECC
T ss_pred CCCCEEEEeccCCCHHHHHHHHcC---CEEEEECchh
Confidence 356689999999999999887764 3789999973
No 266
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=81.67 E-value=2.1 Score=44.02 Aligned_cols=42 Identities=12% Similarity=0.135 Sum_probs=34.5
Q ss_pred cCCCCeEeecccCchHHHHHHhh-cCCCcEEEEEcCcHHHHHHH
Q psy13720 214 IARPLRCLEVFAGAGGLSRGLDK-SGVARSTWAIEFDSAAATAF 256 (487)
Q Consensus 214 ~~~~l~~ldLFsG~Gg~s~Gl~~-aG~~~~~~a~e~~~~a~~t~ 256 (487)
++..-+||||-||.|.++..+.. .|. ..++++|+++.+++.-
T Consensus 240 l~~g~~VLDLGCGsG~la~~LA~~~g~-~~V~GVDis~~~l~~A 282 (433)
T 1u2z_A 240 LKKGDTFMDLGSGVGNCVVQAALECGC-ALSFGCEIMDDASDLT 282 (433)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCC-SEEEEEECCHHHHHHH
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHCCC-CEEEEEeCCHHHHHHH
Confidence 34667899999999999998876 465 5789999999987655
No 267
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=80.98 E-value=1.6 Score=42.92 Aligned_cols=45 Identities=16% Similarity=0.074 Sum_probs=35.6
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcH---HHHHHHHHhCCC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDS---AAATAFKMNNPG 262 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~---~a~~t~~~N~p~ 262 (487)
..-.|||.|||.|.........|- -.+++|+++ ..++.-+.+...
T Consensus 242 ~~~~vlDpF~GsGtt~~aa~~~~r--~~ig~e~~~~~~~~~~~~~~Rl~~ 289 (319)
T 1eg2_A 242 PGSTVLDFFAGSGVTARVAIQEGR--NSICTDAAPVFKEYYQKQLTFLQD 289 (319)
T ss_dssp TTCEEEETTCTTCHHHHHHHHHTC--EEEEEESSTHHHHHHHHHHHHC--
T ss_pred CCCEEEecCCCCCHHHHHHHHcCC--cEEEEECCccHHHHHHHHHHHHHH
Confidence 344699999999999999999994 578999999 777776666543
No 268
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=80.85 E-value=19 Score=35.23 Aligned_cols=44 Identities=16% Similarity=0.140 Sum_probs=33.2
Q ss_pred CCCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHh
Q psy13720 215 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMN 259 (487)
Q Consensus 215 ~~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N 259 (487)
+..-++||+-||.|.++..+....-.-.+.++|+ +.+++.-+.+
T Consensus 189 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~ 232 (359)
T 1x19_A 189 DGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNEN 232 (359)
T ss_dssp TTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHH
T ss_pred CCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHH
Confidence 3567899999999999999877631125679999 8777766654
No 269
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=79.73 E-value=5.1 Score=38.76 Aligned_cols=66 Identities=8% Similarity=0.088 Sum_probs=43.2
Q ss_pred cCCCCeEeeccc------CchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCCCCce-eccchHHHHHHhhchhhhccc
Q psy13720 214 IARPLRCLEVFA------GAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTV-FVDDCNKILQRVIDNEVCDDK 286 (487)
Q Consensus 214 ~~~~l~~ldLFs------G~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p~~~~-~~~di~~~~~~~~~~~~~~~~ 286 (487)
+++..+||||.| |.|+ ....+..|-.-.+.++|+++. .++..+ +.+|+.++
T Consensus 61 l~~g~~VLDLGcGsg~~~GpGs-~~~a~~~~~~~~V~gvDis~~--------v~~v~~~i~gD~~~~------------- 118 (290)
T 2xyq_A 61 VPYNMRVIHFGAGSDKGVAPGT-AVLRQWLPTGTLLVDSDLNDF--------VSDADSTLIGDCATV------------- 118 (290)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH-HHHHHHSCTTCEEEEEESSCC--------BCSSSEEEESCGGGC-------------
T ss_pred CCCCCEEEEeCCCCCCCCCcHH-HHHHHHcCCCCEEEEEECCCC--------CCCCEEEEECccccC-------------
Confidence 345678999999 5577 444555542136889999987 145667 77776432
Q ss_pred cccCCCCCcccEEEccCCC
Q psy13720 287 KQKLPRKGEVEMLCGGPPC 305 (487)
Q Consensus 287 ~~~~p~~~~vd~i~ggpPC 305 (487)
+..+.+|+|+..+++
T Consensus 119 ----~~~~~fD~Vvsn~~~ 133 (290)
T 2xyq_A 119 ----HTANKWDLIISDMYD 133 (290)
T ss_dssp ----CCSSCEEEEEECCCC
T ss_pred ----CccCcccEEEEcCCc
Confidence 112479999987543
No 270
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=78.96 E-value=2.6 Score=40.44 Aligned_cols=45 Identities=18% Similarity=0.197 Sum_probs=37.2
Q ss_pred CCCeEeecccCchHHHHHHhhc-CCCcEEEEEcCcHHHHHHHHHhCC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMNNP 261 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~a-G~~~~~~a~e~~~~a~~t~~~N~p 261 (487)
...++||+-||.|.++..+... +. ..+.++|+++.+++.-+.|..
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~-~~v~gvDis~~~i~~A~~~~~ 91 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGP-SRMVGLDIDSRLIHSARQNIR 91 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCC-SEEEEEESCHHHHHHHHHTC-
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCC-CEEEEECCCHHHHHHHHHHHH
Confidence 4668999999999999998776 33 478899999999998888754
No 271
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=78.93 E-value=2.5 Score=41.16 Aligned_cols=56 Identities=20% Similarity=0.172 Sum_probs=38.8
Q ss_pred cCCCCeEeecccCchHHHH-HHhh-cCCCcEEEEEcCcHHHHHHHHHhCC-----CCceeccchH
Q psy13720 214 IARPLRCLEVFAGAGGLSR-GLDK-SGVARSTWAIEFDSAAATAFKMNNP-----GCTVFVDDCN 271 (487)
Q Consensus 214 ~~~~l~~ldLFsG~Gg~s~-Gl~~-aG~~~~~~a~e~~~~a~~t~~~N~p-----~~~~~~~di~ 271 (487)
+++.-+|||+=||.||++. -+.. .|. .+.++|+++.+++.-+.|.. +..+.++|..
T Consensus 120 l~~g~rVLDIGcG~G~~ta~~lA~~~ga--~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~ 182 (298)
T 3fpf_A 120 FRRGERAVFIGGGPLPLTGILLSHVYGM--RVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDET 182 (298)
T ss_dssp CCTTCEEEEECCCSSCHHHHHHHHTTCC--EEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGG
T ss_pred CCCcCEEEEECCCccHHHHHHHHHccCC--EEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchh
Confidence 4567789999999988763 3333 464 58899999998887776632 2344555543
No 272
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=73.82 E-value=2.3 Score=40.79 Aligned_cols=45 Identities=13% Similarity=0.019 Sum_probs=38.4
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN 260 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~ 260 (487)
.+-++|||=||.|=+++.+....-...++|+|+|+.+++.-+.|.
T Consensus 132 ~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l 176 (281)
T 3lcv_B 132 RPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEAL 176 (281)
T ss_dssp CCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHH
T ss_pred CCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHH
Confidence 466899999999999999877633468999999999999988875
No 273
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=72.81 E-value=1.7 Score=42.22 Aligned_cols=47 Identities=11% Similarity=0.220 Sum_probs=36.8
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCCCC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGC 263 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p~~ 263 (487)
...++||+=||.|+++.-+.+.|. ..++|+|+++..++.-.++.+..
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~ga-~~V~aVDvs~~mL~~a~r~~~rv 131 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQNGA-KLVYAVDVGTNQLVWKLRQDDRV 131 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC-SEEEEECSSSSCSCHHHHTCTTE
T ss_pred cccEEEecCCCccHHHHHHHhCCC-CEEEEEECCHHHHHHHHHhCccc
Confidence 456899999999999999888886 67999999987665533455543
No 274
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=72.32 E-value=5.1 Score=39.95 Aligned_cols=57 Identities=16% Similarity=0.133 Sum_probs=44.8
Q ss_pred CCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHh--CCCCceeccchHHH
Q psy13720 217 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMN--NPGCTVFVDDCNKI 273 (487)
Q Consensus 217 ~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N--~p~~~~~~~di~~~ 273 (487)
.-+|||+-.|.|+++..|...+-.+-+.|+|+|+.-+..++.. .++..++.+|+-++
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~~~~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKFEGSPLQILKRDPYDW 117 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHTTTSSCEEECSCTTCH
T ss_pred CCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhccCCCEEEEECCccch
Confidence 4789999999999999998752114589999999988888764 35567888888543
No 275
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=72.04 E-value=2.9 Score=36.94 Aligned_cols=51 Identities=20% Similarity=0.169 Sum_probs=36.4
Q ss_pred CCCeEeecccCchHHHHHHhhc-CCC--------cEEEEEcCcHHHHHHHHHhCCCCcee-ccchHH
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKS-GVA--------RSTWAIEFDSAAATAFKMNNPGCTVF-VDDCNK 272 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~a-G~~--------~~~~a~e~~~~a~~t~~~N~p~~~~~-~~di~~ 272 (487)
...++|||.||.|+++.-+... |.. ..++++|+++.+ ..+.+..+ .+|+..
T Consensus 22 ~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~------~~~~~~~~~~~d~~~ 82 (196)
T 2nyu_A 22 PGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF------PLEGATFLCPADVTD 82 (196)
T ss_dssp TTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC------CCTTCEEECSCCTTS
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc------cCCCCeEEEeccCCC
Confidence 4568999999999999988765 421 358899999842 23455566 677643
No 276
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=71.76 E-value=2.1 Score=40.38 Aligned_cols=43 Identities=5% Similarity=-0.058 Sum_probs=35.9
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHh
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMN 259 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N 259 (487)
+..++|||=||.|.++.-+...|+ ..+.|+|+++.+++..+.+
T Consensus 55 ~g~~vLDiGCG~G~~~~~~~~~~~-~~v~g~D~s~~~l~~a~~~ 97 (263)
T 2a14_A 55 QGDTLIDIGSGPTIYQVLAACDSF-QDITLSDFTDRNREELEKW 97 (263)
T ss_dssp CEEEEEESSCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHH
T ss_pred CCceEEEeCCCccHHHHHHHHhhh-cceeeccccHHHHHHHHHH
Confidence 557899999999988777767786 6789999999999987764
No 277
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=71.19 E-value=3.2 Score=41.70 Aligned_cols=143 Identities=15% Similarity=0.111 Sum_probs=82.2
Q ss_pred cCCCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCCCCceeccchHHHHHHhhchhhhccccccCCCC
Q psy13720 214 IARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRK 293 (487)
Q Consensus 214 ~~~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p~~~~~~~di~~~~~~~~~~~~~~~~~~~~p~~ 293 (487)
+++..++|||=|+.||++.=+.+-|. .|+|||+-+-+- -...+|++.++.+|...+ .|..
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~rg~--~V~aVD~~~l~~--~l~~~~~V~~~~~d~~~~----------------~~~~ 268 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKRNM--WVYSVDNGPMAQ--SLMDTGQVTWLREDGFKF----------------RPTR 268 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHTTC--EEEEECSSCCCH--HHHTTTCEEEECSCTTTC----------------CCCS
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHCCC--EEEEEEhhhcCh--hhccCCCeEEEeCccccc----------------cCCC
Confidence 45788999999999999999988885 589999764322 223567777776664321 2334
Q ss_pred CcccEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhhcCCcEEEEecCcchhcccc---hhHHHHHHHHHHhCC
Q psy13720 294 GEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKN---SMVLKMTMRCLTQIG 370 (487)
Q Consensus 294 ~~vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~~~P~~~ilENV~gl~~~~~---~~~~~~i~~~l~~~G 370 (487)
+.+|+|+----| .+ ..+..-..+++.....+-+|+ |++=.+.... ...+..+...|...|
T Consensus 269 ~~~D~vvsDm~~---------------~p-~~~~~l~~~wl~~~~~~~aI~-~lKL~mk~~~~~l~~~~~~i~~~l~~~g 331 (375)
T 4auk_A 269 SNISWMVCDMVE---------------KP-AKVAALMAQWLVNGWCRETIF-NLKLPMKKRYEEVSHNLAYIQAQLDEHG 331 (375)
T ss_dssp SCEEEEEECCSS---------------CH-HHHHHHHHHHHHTTSCSEEEE-EEECCSSSHHHHHHHHHHHHHHHHHHTT
T ss_pred CCcCEEEEcCCC---------------Ch-HHhHHHHHHHHhccccceEEE-EEEecccchHHHHHHHHHHHHHHHHhcC
Confidence 579988642111 11 122334445666666655443 4442111111 123455666777888
Q ss_pred CeeEEEEEeccCCCCCCcccEEEEEEEc
Q psy13720 371 YQCTFGTLQAGHFGVSQTRRRAIVLAAA 398 (487)
Q Consensus 371 Y~~~~~~l~a~~yGvPQ~R~R~fiia~~ 398 (487)
+..... +.+ +-..|+=+-+...|
T Consensus 332 ~~~~l~---akh--L~hdReEiTV~~rk 354 (375)
T 4auk_A 332 INAQIQ---ARQ--LYHDREEVTVHVRR 354 (375)
T ss_dssp CCEEEE---EEC--CTTCSSEEEEEEEE
T ss_pred cchhhe---ehh--hccCCcEEEEEEEe
Confidence 865433 322 22467766666554
No 278
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=70.60 E-value=6.4 Score=37.24 Aligned_cols=42 Identities=19% Similarity=0.337 Sum_probs=36.3
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN 260 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~ 260 (487)
.+-+||||=||.|=+++.+. +- ..++|+|||+.+++..+.|.
T Consensus 105 ~p~~VLDlGCG~gpLal~~~--~~-~~y~a~DId~~~i~~ar~~~ 146 (253)
T 3frh_A 105 TPRRVLDIACGLNPLALYER--GI-ASVWGCDIHQGLGDVITPFA 146 (253)
T ss_dssp CCSEEEEETCTTTHHHHHHT--TC-SEEEEEESBHHHHHHHHHHH
T ss_pred CCCeEEEecCCccHHHHHhc--cC-CeEEEEeCCHHHHHHHHHHH
Confidence 56689999999999999988 43 58999999999999888773
No 279
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=67.22 E-value=6.4 Score=41.43 Aligned_cols=43 Identities=21% Similarity=0.135 Sum_probs=30.7
Q ss_pred CCeEeecccCchHHHHHHhh----cCC---------CcEEEEEcCcHHHHHHHHHh
Q psy13720 217 PLRCLEVFAGAGGLSRGLDK----SGV---------ARSTWAIEFDSAAATAFKMN 259 (487)
Q Consensus 217 ~l~~ldLFsG~Gg~s~Gl~~----aG~---------~~~~~a~e~~~~a~~t~~~N 259 (487)
.-+|+|-+||.|||-..... .+- ...++++|+++.+...-+.|
T Consensus 218 ~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mN 273 (530)
T 3ufb_A 218 GESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMN 273 (530)
T ss_dssp TCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHH
T ss_pred CCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHH
Confidence 34799999999999765421 110 12589999999988776655
No 280
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=67.10 E-value=1.5 Score=40.92 Aligned_cols=56 Identities=20% Similarity=0.220 Sum_probs=38.3
Q ss_pred CCCeEeecccCchHHHHHHhhc----CCCcEEEEEcCcHHHHHHHHHhCCCCceeccchH
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKS----GVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCN 271 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~a----G~~~~~~a~e~~~~a~~t~~~N~p~~~~~~~di~ 271 (487)
+.-++||+-||.|+.+.-|... +-...++++|+++.+++.-+...++..++.+|+.
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~~~~v~~~~gD~~ 140 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASDMENITLHQGDCS 140 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGGCTTEEEEECCSS
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhccCCceEEEECcch
Confidence 3458999999999999988765 2113689999999875543322334556666654
No 281
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=64.81 E-value=3.4 Score=38.10 Aligned_cols=38 Identities=11% Similarity=-0.079 Sum_probs=28.2
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHH
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAA 253 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~ 253 (487)
..-++||+-||.|.++.-+....-...+.++|+++.+.
T Consensus 24 ~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~m 61 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENL 61 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGG
T ss_pred CCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHH
Confidence 44579999999999999887432223688999994443
No 282
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=63.25 E-value=7.2 Score=42.48 Aligned_cols=57 Identities=14% Similarity=0.169 Sum_probs=41.1
Q ss_pred CCeEeecccCchHHHHH-H---hhcC---------CCcEEEEEcCcHHHHHHHHHh----CCC-CceeccchHHH
Q psy13720 217 PLRCLEVFAGAGGLSRG-L---DKSG---------VARSTWAIEFDSAAATAFKMN----NPG-CTVFVDDCNKI 273 (487)
Q Consensus 217 ~l~~ldLFsG~Gg~s~G-l---~~aG---------~~~~~~a~e~~~~a~~t~~~N----~p~-~~~~~~di~~~ 273 (487)
...|+|+=||-|-|+.- | +.|| ...-++|||.++.|..+.+.. +.+ ..++.+|++++
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev 484 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSL 484 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhc
Confidence 45799999999999752 2 2234 223789999999888776642 434 67888898876
No 283
>2dpm_A M.dpnii 1, protein (adenine-specific methyltransferase dpnii 1); DNA adenine methyltransferase, methylase; HET: SAM; 1.80A {Streptococcus pneumoniae} SCOP: c.66.1.28
Probab=60.69 E-value=7.5 Score=37.43 Aligned_cols=37 Identities=22% Similarity=0.386 Sum_probs=31.0
Q ss_pred CeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHH
Q psy13720 218 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKM 258 (487)
Q Consensus 218 l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~ 258 (487)
-+.+|.|+|+|+....+.. ..++.+|+|+.-+..|+.
T Consensus 37 ~~yvEpF~GggaV~~~~~~----~~~i~ND~n~~Lin~y~~ 73 (284)
T 2dpm_A 37 NRYFEPFVGGGALFFDLAP----KDAVINDFNAELINCYQQ 73 (284)
T ss_dssp SCEEETTCTTCHHHHHHCC----SEEEEEESCHHHHHHHHH
T ss_pred CEEEeecCCccHHHHhhhc----cceeeeecchHHHHHHHH
Confidence 3699999999999877642 468899999999999964
No 284
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=59.38 E-value=4.5 Score=43.58 Aligned_cols=69 Identities=17% Similarity=0.207 Sum_probs=44.5
Q ss_pred CCCeEeecccCchHHHHHHhhcCC---Cc-EEEEEcCcHHHHHHHHH---h-CCC-CceeccchHHHHHHhhchhhhccc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGV---AR-STWAIEFDSAAATAFKM---N-NPG-CTVFVDDCNKILQRVIDNEVCDDK 286 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~---~~-~~~a~e~~~~a~~t~~~---N-~p~-~~~~~~di~~~~~~~~~~~~~~~~ 286 (487)
+...|+|+=||.|-|+.-.-+||- .+ -|+|||.++.|..+.+. | +.+ ..++.+|++++
T Consensus 357 ~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A~~a~~~v~~N~~~dkVtVI~gd~eev------------- 423 (637)
T 4gqb_A 357 NVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREW------------- 423 (637)
T ss_dssp CEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHHHHHHHHHHHHTTGGGEEEEESCTTTC-------------
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHHHHhccCCCeEEEEeCcceec-------------
Confidence 345789999999988654444332 13 38999999988877653 3 222 34666666543
Q ss_pred cccCCCCCcccEEEc
Q psy13720 287 KQKLPRKGEVEMLCG 301 (487)
Q Consensus 287 ~~~~p~~~~vd~i~g 301 (487)
.+| ..||||+-
T Consensus 424 --~LP--EKVDIIVS 434 (637)
T 4gqb_A 424 --VAP--EKADIIVS 434 (637)
T ss_dssp --CCS--SCEEEEEC
T ss_pred --cCC--cccCEEEE
Confidence 244 47999873
No 285
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=57.45 E-value=1.6e+02 Score=29.41 Aligned_cols=157 Identities=13% Similarity=0.057 Sum_probs=92.0
Q ss_pred CCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCCC-------------CceeccchHHHHHHhhchhhh
Q psy13720 217 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPG-------------CTVFVDDCNKILQRVIDNEVC 283 (487)
Q Consensus 217 ~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p~-------------~~~~~~di~~~~~~~~~~~~~ 283 (487)
+-+||=+=.|.||...-+..-.. +.+..||+|+..++.-+..+|. ..++.+|...+++....
T Consensus 206 pkrVLIIGgGdG~~~revlkh~~-~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~---- 280 (381)
T 3c6k_A 206 GKDVLILGGGDGGILCEIVKLKP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAK---- 280 (381)
T ss_dssp TCEEEEEECTTCHHHHHHHTTCC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHH----
T ss_pred CCeEEEECCCcHHHHHHHHhcCC-ceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhh----
Confidence 34688777788887766655555 6788999999999888776653 34667888877654311
Q ss_pred ccccccCCCCCcccEEEccCCCcCcccCCccCCcccccchhHHH-HHHHHHh-hhcCCcEEEEecCcchhcccchhHHHH
Q psy13720 284 DDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLI-VSYLSYC-DYYRPRFFLLENVRNFVAFKNSMVLKM 361 (487)
Q Consensus 284 ~~~~~~~p~~~~vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~-~~~l~~v-~~~~P~~~ilENV~gl~~~~~~~~~~~ 361 (487)
..+.+|+|+.-.+=.+.|.... ..-..|+ .+|++.+ +.++|.-+++-+...... ...+..
T Consensus 281 --------~~~~yDvIIvDl~D~~~s~~p~-------g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~s~~~---~~~~~~ 342 (381)
T 3c6k_A 281 --------EGREFDYVINDLTAVPISTSPE-------EDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNL---TEALSL 342 (381)
T ss_dssp --------HTCCEEEEEEECCSSCCCCC-----------CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTC---HHHHHH
T ss_pred --------ccCceeEEEECCCCCcccCccc-------CcchHHHHHHHHHHHHHhcCCCCEEEEecCCCcc---hhHHHH
Confidence 1135899987655333332110 0112333 4555544 456899888755332211 235677
Q ss_pred HHHHHHhCCCeeEEEEEeccCCCCCCc-ccEEEEEEEcC
Q psy13720 362 TMRCLTQIGYQCTFGTLQAGHFGVSQT-RRRAIVLAAAP 399 (487)
Q Consensus 362 i~~~l~~~GY~~~~~~l~a~~yGvPQ~-R~R~fiia~~~ 399 (487)
+.+.|.+..-.+.....-+. ||.- =...|++|+++
T Consensus 343 i~~tl~~vF~~v~~~~~~~~---VPSy~~~W~F~~aSK~ 378 (381)
T 3c6k_A 343 YEEQLGRLYCPVEFSKEIVC---VPSYLELWVFYTVWKK 378 (381)
T ss_dssp HHHHHTTSSSCEEEEEEEEC---CGGGSSCEEEEEEEEC
T ss_pred HHHHHHHhCCcceEeeEEEE---ecCCCCceeeeEEECC
Confidence 78888877544543221111 3321 24678888864
No 286
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=55.77 E-value=12 Score=35.67 Aligned_cols=44 Identities=16% Similarity=0.255 Sum_probs=32.8
Q ss_pred CCCeEeecccCchH----HHHHHhhc-CC---CcEEEEEcCcHHHHHHHHHh
Q psy13720 216 RPLRCLEVFAGAGG----LSRGLDKS-GV---ARSTWAIEFDSAAATAFKMN 259 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg----~s~Gl~~a-G~---~~~~~a~e~~~~a~~t~~~N 259 (487)
+.++++|+-||.|- ++.-|... |- .--+.|+|+++.+++.-+.+
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~ 156 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSG 156 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHT
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhc
Confidence 46899999999997 44444433 31 02589999999999988876
No 287
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=55.51 E-value=6.9 Score=36.53 Aligned_cols=37 Identities=27% Similarity=0.309 Sum_probs=29.4
Q ss_pred CCCCeEeecccCchHHHHHHhhc-CCCcEEEEEcCcHH
Q psy13720 215 ARPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSA 251 (487)
Q Consensus 215 ~~~l~~ldLFsG~Gg~s~Gl~~a-G~~~~~~a~e~~~~ 251 (487)
++..++||+-||.|.++.-+... |-...+.++|+++.
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~ 79 (275)
T 3bkx_A 42 KPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASP 79 (275)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCT
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCcc
Confidence 35678999999999999988776 42136899999975
No 288
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=55.19 E-value=7.8 Score=36.67 Aligned_cols=44 Identities=7% Similarity=-0.120 Sum_probs=32.4
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN 260 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~ 260 (487)
...++|||=||.|.++.-+...+. .-+.++|+++.+++..+.+.
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~~~-~~v~gvD~s~~~l~~a~~~~ 114 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACSHF-EDITMTDFLEVNRQELGRWL 114 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGGGC-SEEEEECSCHHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhccCC-CeEEEeCCCHHHHHHHHHHH
Confidence 456899999999985543333233 46899999999998777654
No 289
>2g1p_A DNA adenine methylase; DAM methylation, GATC recognition, base flipping, bacterial factor, transferase-DNA complex; HET: DNA SAH; 1.89A {Escherichia coli} PDB: 2ore_D*
Probab=53.98 E-value=9.1 Score=36.66 Aligned_cols=37 Identities=19% Similarity=0.266 Sum_probs=30.0
Q ss_pred CeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHH
Q psy13720 218 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKM 258 (487)
Q Consensus 218 l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~ 258 (487)
-+.+|.|+|+|+....+. . +.++.+|+|+.-+..|+.
T Consensus 29 ~~yvEpF~Ggg~V~~~~~---~-~~~i~ND~n~~lin~y~~ 65 (278)
T 2g1p_A 29 ECLVEPFVGAGSVFLNTD---F-SRYILADINSDLISLYNI 65 (278)
T ss_dssp SEEEETTCTTCHHHHTCC---C-SEEEEEESCHHHHHHHHH
T ss_pred CeEEeeccCccHHHHhhc---c-cceEEEeccHHHHHHHHH
Confidence 479999999998866543 2 467899999999988875
No 290
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=53.57 E-value=14 Score=37.02 Aligned_cols=43 Identities=19% Similarity=0.186 Sum_probs=37.3
Q ss_pred CCCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHh
Q psy13720 215 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMN 259 (487)
Q Consensus 215 ~~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N 259 (487)
+...++||+=||.|.+..-|...|. .+.++|+++.+++.-+.+
T Consensus 106 ~~~~~VLDiGcG~G~~~~~l~~~g~--~v~gvD~s~~~~~~a~~~ 148 (416)
T 4e2x_A 106 GPDPFIVEIGCNDGIMLRTIQEAGV--RHLGFEPSSGVAAKAREK 148 (416)
T ss_dssp SSSCEEEEETCTTTTTHHHHHHTTC--EEEEECCCHHHHHHHHTT
T ss_pred CCCCEEEEecCCCCHHHHHHHHcCC--cEEEECCCHHHHHHHHHc
Confidence 3567899999999999999999886 578999999998877766
No 291
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=51.88 E-value=9.5 Score=36.98 Aligned_cols=31 Identities=13% Similarity=0.074 Sum_probs=25.6
Q ss_pred CCCCeEeecccCchHHHHHHhhcCCCcEEEEEcC
Q psy13720 215 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEF 248 (487)
Q Consensus 215 ~~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~ 248 (487)
++..+||||.||.||++.-+.+.| .+.++|+
T Consensus 81 ~~g~~VLDlGcG~G~~s~~la~~~---~V~gvD~ 111 (305)
T 2p41_A 81 TPEGKVVDLGCGRGGWSYYCGGLK---NVREVKG 111 (305)
T ss_dssp CCCEEEEEETCTTSHHHHHHHTST---TEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHhcC---CEEEEec
Confidence 345799999999999999887774 3678998
No 292
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=47.91 E-value=25 Score=34.44 Aligned_cols=45 Identities=16% Similarity=0.155 Sum_probs=34.8
Q ss_pred CCCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhC
Q psy13720 215 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN 260 (487)
Q Consensus 215 ~~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~ 260 (487)
+...+++|+-||.|.++..+....-.-.+.++|+ +.+++.-+.+.
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~ 225 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRF 225 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHH
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHH
Confidence 3567899999999999999877642125789999 88887766653
No 293
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=47.66 E-value=16 Score=35.28 Aligned_cols=42 Identities=12% Similarity=0.137 Sum_probs=32.0
Q ss_pred CeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhC
Q psy13720 218 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN 260 (487)
Q Consensus 218 l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~ 260 (487)
.+++|+-||.|.++..+....-.-.+.++|+ +.+++.-+.+.
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~ 210 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNL 210 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHT
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHH
Confidence 7899999999999999876521125689999 87776666654
No 294
>1yf3_A DNA adenine methylase; T4DAM, methyltransferase, transferase-DNA complex; HET: DNA SAH; 2.29A {Enterobacteria phage T4} SCOP: c.66.1.28 PDB: 1yfj_A* 1yfl_A* 1q0s_A* 1q0t_A*
Probab=44.70 E-value=9.9 Score=35.97 Aligned_cols=38 Identities=16% Similarity=0.197 Sum_probs=31.1
Q ss_pred CeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhC
Q psy13720 218 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN 260 (487)
Q Consensus 218 l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~ 260 (487)
-+.+|.|+|+|++...+. . + ++.+|+|+.....|+.--
T Consensus 26 ~~yvEpF~GggaV~~~~~---~-~-~viNDin~~li~~~~~i~ 63 (259)
T 1yf3_A 26 NRFVDLFCGGLSVSLNVN---G-P-VLANDIQEPIIEMYKRLI 63 (259)
T ss_dssp SEEEETTCTTCTTGGGSC---S-S-EEEECSCHHHHHHHHHHT
T ss_pred CeEEEecCCccHHHHhcc---c-c-EEEecCChHHHHHHHHHH
Confidence 479999999998876553 2 5 889999999999998654
No 295
>2lci_A Protein OR36; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=44.28 E-value=50 Score=25.98 Aligned_cols=48 Identities=21% Similarity=0.227 Sum_probs=38.8
Q ss_pred hHHHHHHHHHhhhcCCcEEEEecCcchhcccchhHHHHHHHHHHhCCCeeEEEE
Q psy13720 324 NSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGT 377 (487)
Q Consensus 324 ~~L~~~~l~~v~~~~P~~~ilENV~gl~~~~~~~~~~~i~~~l~~~GY~~~~~~ 377 (487)
..|+.+++.++..+.-++|++ +......-+..+.+.+++.||.++-..
T Consensus 61 kqllkemlelisklgykvfll------lqdqdeneleefkrkiesqgyevrkvt 108 (134)
T 2lci_A 61 KQLLKEMLELISKLGYKVFLL------LQDQDENELEEFKRKIESQGYEVRKVT 108 (134)
T ss_dssp HHHHHHHHHHHHHHTCCEEEE------EECSCHHHHHHHHHHHHTTTCEEEEEC
T ss_pred HHHHHHHHHHHHHhCceeEEE------eecCchhHHHHHHHHHHhCCeeeeecC
Confidence 368899999999999999987 444555667888889999999987643
No 296
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=43.93 E-value=23 Score=34.53 Aligned_cols=44 Identities=16% Similarity=0.260 Sum_probs=33.2
Q ss_pred CCCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHh
Q psy13720 215 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMN 259 (487)
Q Consensus 215 ~~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N 259 (487)
+...++||+-||.|.++..+...+-.-.+.++|+ +.+++.-+.|
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~ 225 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSY 225 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHH
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHH
Confidence 3567899999999999999877653235678888 7777766655
No 297
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=43.36 E-value=22 Score=33.63 Aligned_cols=53 Identities=15% Similarity=0.151 Sum_probs=38.8
Q ss_pred CeEeecccCc---hHHHHHHhhc--CCCcEEEEEcCcHHHHHHHHHhC---CCCceeccchHH
Q psy13720 218 LRCLEVFAGA---GGLSRGLDKS--GVARSTWAIEFDSAAATAFKMNN---PGCTVFVDDCNK 272 (487)
Q Consensus 218 l~~ldLFsG~---Gg~s~Gl~~a--G~~~~~~a~e~~~~a~~t~~~N~---p~~~~~~~di~~ 272 (487)
-++|||=||. |.++.-+... |. -+.++|+++..++.-+.+. +.+..+.+|+.+
T Consensus 79 ~~vLDlGcG~pt~G~~~~~~~~~~p~~--~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~ 139 (274)
T 2qe6_A 79 SQFLDLGSGLPTVQNTHEVAQSVNPDA--RVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRD 139 (274)
T ss_dssp CEEEEETCCSCCSSCHHHHHHHHCTTC--EEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTC
T ss_pred CEEEEECCCCCCCChHHHHHHHhCCCC--EEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCC
Confidence 5799999999 9776655543 43 5789999999888776654 345567777754
No 298
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=43.27 E-value=33 Score=33.87 Aligned_cols=57 Identities=19% Similarity=0.142 Sum_probs=39.3
Q ss_pred CCCeEeecccCchHHHHHHhhc-CCCcEEEEEcCcHHHHHHHHHhCC--CCceeccchHHH
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMNNP--GCTVFVDDCNKI 273 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~a-G~~~~~~a~e~~~~a~~t~~~N~p--~~~~~~~di~~~ 273 (487)
+.-.++|.-+|.||-|..+-.. |-.-.++|+|.|+.|++.-+ +.. ....+.++-.++
T Consensus 57 pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL~~~Rv~lv~~nF~~l 116 (347)
T 3tka_A 57 PDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TIDDPRFSIIHGPFSAL 116 (347)
T ss_dssp TTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TCCCTTEEEEESCGGGH
T ss_pred CCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hhcCCcEEEEeCCHHHH
Confidence 4457999999999999998654 32235899999999998654 321 223455554444
No 299
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=43.12 E-value=83 Score=30.73 Aligned_cols=61 Identities=23% Similarity=0.183 Sum_probs=39.0
Q ss_pred CCcCCCCeEeecccCchHH---HHHHhhcCCCcEEEEEcCcHHHHHHHHHhCCCCceeccchHHHH
Q psy13720 212 PSIARPLRCLEVFAGAGGL---SRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKIL 274 (487)
Q Consensus 212 ~~~~~~l~~ldLFsG~Gg~---s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p~~~~~~~di~~~~ 274 (487)
+.|..++++.=+=+|..+. ...+...|+ +++..+|.++..++.+...++....+ .|..+++
T Consensus 21 ~~Mm~~irvgiiG~G~~~~~~~~~~~~~~~~-~lvav~d~~~~~a~~~a~~~~~~~~~-~~~~~ll 84 (361)
T 3u3x_A 21 QSMMDELRFAAVGLNHNHIYGQVNCLLRAGA-RLAGFHEKDDALAAEFSAVYADARRI-ATAEEIL 84 (361)
T ss_dssp -----CCEEEEECCCSTTHHHHHHHHHHTTC-EEEEEECSCHHHHHHHHHHSSSCCEE-SCHHHHH
T ss_pred hhhccCcEEEEECcCHHHHHHHHHHhhcCCc-EEEEEEcCCHHHHHHHHHHcCCCccc-CCHHHHh
Confidence 3455678876555554332 233455787 89999999999999888888654444 5777765
No 300
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=41.17 E-value=33 Score=33.62 Aligned_cols=45 Identities=9% Similarity=0.136 Sum_probs=34.5
Q ss_pred CCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCC
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP 261 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p 261 (487)
..-++||+=||.|.++..+....-.-.+.++|+ +..++.-+.+..
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ 223 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTA 223 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHT
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHH
Confidence 456899999999999999977432125789999 888777776643
No 301
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=39.77 E-value=15 Score=31.91 Aligned_cols=37 Identities=24% Similarity=0.117 Sum_probs=31.6
Q ss_pred CCCeEeecccCch-HHHHHHhh-cCCCcEEEEEcCcHHHHH
Q psy13720 216 RPLRCLEVFAGAG-GLSRGLDK-SGVARSTWAIEFDSAAAT 254 (487)
Q Consensus 216 ~~l~~ldLFsG~G-g~s~Gl~~-aG~~~~~~a~e~~~~a~~ 254 (487)
.+-++||+=||-| -.+.-|.. .|+ -+.|+|+++.|++
T Consensus 35 ~~~rVlEVG~G~g~~vA~~La~~~g~--~V~atDInp~Av~ 73 (153)
T 2k4m_A 35 PGTRVVEVGAGRFLYVSDYIRKHSKV--DLVLTDIKPSHGG 73 (153)
T ss_dssp SSSEEEEETCTTCCHHHHHHHHHSCC--EEEEECSSCSSTT
T ss_pred CCCcEEEEccCCChHHHHHHHHhCCC--eEEEEECCccccc
Confidence 3568999999999 58888886 997 4789999999887
No 302
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=37.95 E-value=56 Score=32.01 Aligned_cols=129 Identities=10% Similarity=0.102 Sum_probs=73.8
Q ss_pred CCCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCC------CCceeccchHHHHHHhhchhhhccccc
Q psy13720 215 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP------GCTVFVDDCNKILQRVIDNEVCDDKKQ 288 (487)
Q Consensus 215 ~~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p------~~~~~~~di~~~~~~~~~~~~~~~~~~ 288 (487)
+...+++|+=||.|.++..+....-.-.+.++|+ +..++.-+.+.. ......+|+. .
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~----------------~ 263 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFF----------------E 263 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT----------------T
T ss_pred ccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCC----------------C
Confidence 3567899999999999999977632125688999 887776665532 2233333331 1
Q ss_pred cCCCCCcccEEEccCCCcCcccCCccCCcccccch-hHHHHHHHHHhhhcCC--cEEEEecCcchhcc------------
Q psy13720 289 KLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFK-NSLIVSYLSYCDYYRP--RFFLLENVRNFVAF------------ 353 (487)
Q Consensus 289 ~~p~~~~vd~i~ggpPCq~fS~~~~~~~~~~~d~r-~~L~~~~l~~v~~~~P--~~~ilENV~gl~~~------------ 353 (487)
.+|. .+|+|+...-...++ +.. ..++.+ +.+.++| .++++|.+..-...
T Consensus 264 ~~p~--~~D~v~~~~vlh~~~-----------d~~~~~~L~~---~~~~L~pgG~l~i~e~~~~~~~~~~~~~~d~~~~~ 327 (369)
T 3gwz_A 264 TIPD--GADVYLIKHVLHDWD-----------DDDVVRILRR---IATAMKPDSRLLVIDNLIDERPAASTLFVDLLLLV 327 (369)
T ss_dssp CCCS--SCSEEEEESCGGGSC-----------HHHHHHHHHH---HHTTCCTTCEEEEEEEBCCSSCCHHHHHHHHHHHH
T ss_pred CCCC--CceEEEhhhhhccCC-----------HHHHHHHHHH---HHHHcCCCCEEEEEEeccCCCCCCchhHhhHHHHh
Confidence 2332 688887654432221 211 133333 3345566 57777876432100
Q ss_pred ---cchhHHHHHHHHHHhCCCeeEEE
Q psy13720 354 ---KNSMVLKMTMRCLTQIGYQCTFG 376 (487)
Q Consensus 354 ---~~~~~~~~i~~~l~~~GY~~~~~ 376 (487)
........+.+.|++.|+.+...
T Consensus 328 ~~~g~~~t~~e~~~ll~~aGf~~~~~ 353 (369)
T 3gwz_A 328 LVGGAERSESEFAALLEKSGLRVERS 353 (369)
T ss_dssp HHSCCCBCHHHHHHHHHTTTEEEEEE
T ss_pred hcCCccCCHHHHHHHHHHCCCeEEEE
Confidence 00122456777788889876544
No 303
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=37.87 E-value=21 Score=34.30 Aligned_cols=38 Identities=16% Similarity=0.189 Sum_probs=28.1
Q ss_pred CcCCCCeEeecccCchHHHH-HHhhcCCCcEEEEEcCcHH
Q psy13720 213 SIARPLRCLEVFAGAGGLSR-GLDKSGVARSTWAIEFDSA 251 (487)
Q Consensus 213 ~~~~~l~~ldLFsG~Gg~s~-Gl~~aG~~~~~~a~e~~~~ 251 (487)
.++...+||||.||.||++. .....|. .-+.++|+...
T Consensus 87 ~Lk~~~~VLDLGaAPGGWsQvAa~~~gv-~sV~GvdvG~d 125 (282)
T 3gcz_A 87 YVKPTGIVVDLGCGRGGWSYYAASLKNV-KKVMAFTLGVQ 125 (282)
T ss_dssp SCCCCEEEEEETCTTCHHHHHHHTSTTE-EEEEEECCCCT
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHhcCC-CeeeeEEeccC
Confidence 34566689999999999998 5556675 45668888643
No 304
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=37.35 E-value=42 Score=33.45 Aligned_cols=60 Identities=13% Similarity=0.163 Sum_probs=38.3
Q ss_pred CCCcCCCCeEeecccCchHHHH----HHhhc---------CCCcEEEEEcCcHHHHHHHHHhCCCCceeccchHHHH
Q psy13720 211 WPSIARPLRCLEVFAGAGGLSR----GLDKS---------GVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKIL 274 (487)
Q Consensus 211 ~~~~~~~l~~ldLFsG~Gg~s~----Gl~~a---------G~~~~~~a~e~~~~a~~t~~~N~p~~~~~~~di~~~~ 274 (487)
...|+.+|++.=+ |+|.++. ++... ++ +++..+|.++..++.+...++....+ .|..+++
T Consensus 20 ~~~Ms~klrvgiI--G~G~ig~~h~~~~~~~~~~~~~~~~~~-elvav~d~~~~~a~~~a~~~~~~~~y-~d~~~ll 92 (412)
T 4gqa_A 20 FQSMSARLNIGLI--GSGFMGQAHADAYRRAAMFYPDLPKRP-HLYALADQDQAMAERHAAKLGAEKAY-GDWRELV 92 (412)
T ss_dssp -----CEEEEEEE--CCSHHHHHHHHHHHHHHHHCTTSSSEE-EEEEEECSSHHHHHHHHHHHTCSEEE-SSHHHHH
T ss_pred cccccccceEEEE--cCcHHHHHHHHHHHhccccccccCCCe-EEEEEEcCCHHHHHHHHHHcCCCeEE-CCHHHHh
Confidence 3467778888655 6666543 33332 33 78999999999999988888654444 5777775
No 305
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=34.07 E-value=26 Score=33.53 Aligned_cols=36 Identities=14% Similarity=0.198 Sum_probs=25.7
Q ss_pred CcCCCCeEeecccCchHHHH-HHhhcCCCcEEEEEcCc
Q psy13720 213 SIARPLRCLEVFAGAGGLSR-GLDKSGVARSTWAIEFD 249 (487)
Q Consensus 213 ~~~~~l~~ldLFsG~Gg~s~-Gl~~aG~~~~~~a~e~~ 249 (487)
.++...+||||.||.||++. .+...|. .-+.++|+-
T Consensus 71 ~l~~~~~VLDLGaAPGGWSQvAa~~~~~-~~v~g~dVG 107 (277)
T 3evf_A 71 YVKLEGRVIDLGCGRGGWCYYAAAQKEV-SGVKGFTLG 107 (277)
T ss_dssp SSCCCEEEEEETCTTCHHHHHHHTSTTE-EEEEEECCC
T ss_pred CCCCCCEEEEecCCCCHHHHHHHHhcCC-CcceeEEEe
Confidence 34456689999999999998 4555564 445566665
No 306
>1x87_A Urocanase protein; structural genomics, protein STR initiative, MCSG, PSI, midwest center for structural genomi; HET: MSE NAD; 2.40A {Geobacillus stearothermophilus} SCOP: e.51.1.1
Probab=33.87 E-value=57 Score=33.63 Aligned_cols=53 Identities=23% Similarity=0.262 Sum_probs=35.6
Q ss_pred ecccCchHHH----HHHhhcCCCcEEEEEcCcHHHHHHHHHhCCCCceeccchHHHHHHh
Q psy13720 222 EVFAGAGGLS----RGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 277 (487)
Q Consensus 222 dLFsG~Gg~s----~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p~~~~~~~di~~~~~~~ 277 (487)
=|=||.|||+ ++...+|. +..++|+|+.+++.-. ...-......|+.+.+..+
T Consensus 165 ~lTaGLGGMgGAQplA~~mag~--v~i~~Evd~~ri~~R~-~~gyld~~~~~ldeal~~~ 221 (551)
T 1x87_A 165 TLTAGLGGMGGAQPLAVTMNGG--VCLAIEVDPARIQRRI-DTNYLDTMTDSLDAALEMA 221 (551)
T ss_dssp EEEECCSTTGGGHHHHHHHTTC--EEEEEESCHHHHHHHH-HTTSCSEEESCHHHHHHHH
T ss_pred EEEecCCccchhhHHHHHHcCc--eEEEEEECHHHHHHHH-hCCCceeEcCCHHHHHHHH
Confidence 3557888876 66778896 6789999999998733 3223444556666655443
No 307
>1uwk_A Urocanate hydratase; hydrolase, urocanase, imidazolonepropionate, histidine metabolism, lyase; HET: NAD URO; 1.19A {Pseudomonas putida} SCOP: e.51.1.1 PDB: 1w1u_A* 1uwl_A* 2v7g_A*
Probab=33.77 E-value=55 Score=33.81 Aligned_cols=52 Identities=19% Similarity=0.180 Sum_probs=35.0
Q ss_pred ecccCchHHH----HHHhhcCCCcEEEEEcCcHHHHHHHHHhCCCCceeccchHHHHHH
Q psy13720 222 EVFAGAGGLS----RGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQR 276 (487)
Q Consensus 222 dLFsG~Gg~s----~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p~~~~~~~di~~~~~~ 276 (487)
=|=||.|||+ ++...+|. +..++|+|+.+++.-. ...-......|+.+.+..
T Consensus 170 ~lTaGLGGMgGAQplA~~mag~--v~i~~Evd~~ri~~R~-~~gyld~~~~~ldeal~~ 225 (557)
T 1uwk_A 170 VLTAGLGGMGGAQPLAATLAGA--CSLNIESQQSRIDFRL-ETRYVDEQATDLDDALVR 225 (557)
T ss_dssp EEEECCSTTTTHHHHHHHHTTC--EEEEEESCHHHHHHHH-HTTSCCEECSSHHHHHHH
T ss_pred EEEecCCccchhhHHHHHHcCc--eEEEEEECHHHHHHHH-hCCCceeEcCCHHHHHHH
Confidence 3557888876 66778886 6789999999998733 322234455666655544
No 308
>2fkn_A Urocanate hydratase; rossman fold, lyase; HET: NAD; 2.20A {Bacillus subtilis}
Probab=33.63 E-value=55 Score=33.75 Aligned_cols=53 Identities=17% Similarity=0.182 Sum_probs=35.7
Q ss_pred ecccCchHHH----HHHhhcCCCcEEEEEcCcHHHHHHHHHhCCCCceeccchHHHHHHh
Q psy13720 222 EVFAGAGGLS----RGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 277 (487)
Q Consensus 222 dLFsG~Gg~s----~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p~~~~~~~di~~~~~~~ 277 (487)
=|=||.|||+ ++...+|. +..++|+|+.+++.-. ...-......|+.+.+..+
T Consensus 166 ~lTaGLGGMgGAQplA~~mag~--v~i~~Evd~~ri~~R~-~~gyld~~~~~ldeal~~~ 222 (552)
T 2fkn_A 166 TLTAGLGGMGGAQPLSVTMNEG--VVIAVEVDEKRIDKRI-ETKYCDRKTASIEEALAWA 222 (552)
T ss_dssp EEEECCSTTTTHHHHHHHHTTC--EEEEEESCHHHHHHHH-HTTSCSEEESCHHHHHHHH
T ss_pred EEEecCCccchhhHHHHHHcCc--eEEEEEECHHHHHHHH-hCCcceeEcCCHHHHHHHH
Confidence 3557888876 66778886 6789999999998733 3223445556766655443
No 309
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=32.75 E-value=23 Score=34.34 Aligned_cols=42 Identities=7% Similarity=0.069 Sum_probs=30.5
Q ss_pred CCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHh
Q psy13720 217 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMN 259 (487)
Q Consensus 217 ~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N 259 (487)
..+++|+-||.|.++..+....-.-.+.++|+ +..++.-+.+
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~ 221 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKT 221 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHH
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHH
Confidence 67899999999999999877632125678899 5555544443
No 310
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=31.02 E-value=16 Score=34.21 Aligned_cols=40 Identities=18% Similarity=0.285 Sum_probs=29.1
Q ss_pred HHHHhhcCCCcEEEEEcCcHHHHHHHHHhCCCCceeccchHH
Q psy13720 231 SRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNK 272 (487)
Q Consensus 231 s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p~~~~~~~di~~ 272 (487)
...|...|. + +..+|.++...+......++...+..|+.+
T Consensus 19 a~~la~~Ga-~-V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~ 58 (247)
T 3ged_A 19 CLDFLEAGD-K-VCFIDIDEKRSADFAKERPNLFYFHGDVAD 58 (247)
T ss_dssp HHHHHHTTC-E-EEEEESCHHHHHHHHTTCTTEEEEECCTTS
T ss_pred HHHHHHCCC-E-EEEEeCCHHHHHHHHHhcCCEEEEEecCCC
Confidence 455677897 3 567899998888777777776667777654
No 311
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=30.25 E-value=77 Score=30.57 Aligned_cols=56 Identities=14% Similarity=0.101 Sum_probs=37.3
Q ss_pred CCCCeEeecccCchHHHH-----HHhhc-CCCcEEEEEcCcHHHHHHHHHhCCCCceeccchHHHH
Q psy13720 215 ARPLRCLEVFAGAGGLSR-----GLDKS-GVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKIL 274 (487)
Q Consensus 215 ~~~l~~ldLFsG~Gg~s~-----Gl~~a-G~~~~~~a~e~~~~a~~t~~~N~p~~~~~~~di~~~~ 274 (487)
++.+|+.=+ |+|.++. .+... ++ +++..+|.++..++.+...++-...+ .|..+++
T Consensus 21 ~~mirigiI--G~G~ig~~~~~~~~~~~~~~-~lvav~d~~~~~a~~~a~~~g~~~~y-~d~~ell 82 (350)
T 4had_A 21 QSMLRFGII--STAKIGRDNVVPAIQDAENC-VVTAIASRDLTRAREMADRFSVPHAF-GSYEEML 82 (350)
T ss_dssp -CCEEEEEE--SCCHHHHHTHHHHHHHCSSE-EEEEEECSSHHHHHHHHHHHTCSEEE-SSHHHHH
T ss_pred cCccEEEEE--cChHHHHHHHHHHHHhCCCe-EEEEEECCCHHHHHHHHHHcCCCeee-CCHHHHh
Confidence 355676644 7776653 34444 54 88999999999988888777543333 5777775
No 312
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=30.01 E-value=18 Score=36.83 Aligned_cols=54 Identities=20% Similarity=0.212 Sum_probs=38.0
Q ss_pred CCCeEeecccC------chHHHHHHhhcCC-CcEEEEEcCcHHHHHHHHHhCCCCceeccchHHH
Q psy13720 216 RPLRCLEVFAG------AGGLSRGLDKSGV-ARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKI 273 (487)
Q Consensus 216 ~~l~~ldLFsG------~Gg~s~Gl~~aG~-~~~~~a~e~~~~a~~t~~~N~p~~~~~~~di~~~ 273 (487)
+..++|||=|| .||.++-+...-+ .-.+.++|+++... .+.++...+.+|+.++
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~----~~~~rI~fv~GDa~dl 276 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH----VDELRIRTIQGDQNDA 276 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG----GCBTTEEEEECCTTCH
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh----hcCCCcEEEEeccccc
Confidence 56799999999 5777777654311 12678999999863 3456677788887654
No 313
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=29.51 E-value=2.5e+02 Score=23.46 Aligned_cols=120 Identities=13% Similarity=0.086 Sum_probs=64.1
Q ss_pred CCCCeEeecccCchHHHHHHhhcCCCcEEEEEcCcHHHHHHHHHhCCC-CceeccchHHHHHHhhchhhhccccccCCCC
Q psy13720 215 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPG-CTVFVDDCNKILQRVIDNEVCDDKKQKLPRK 293 (487)
Q Consensus 215 ~~~l~~ldLFsG~Gg~s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p~-~~~~~~di~~~~~~~~~~~~~~~~~~~~p~~ 293 (487)
+..-++||+-||. . ++|+++..++..+.+.+. .....+|+.++. ...++ .
T Consensus 11 ~~g~~vL~~~~g~-----------v-----~vD~s~~ml~~a~~~~~~~~~~~~~d~~~~~------------~~~~~-~ 61 (176)
T 2ld4_A 11 SAGQFVAVVWDKS-----------S-----PVEALKGLVDKLQALTGNEGRVSVENIKQLL------------QSAHK-E 61 (176)
T ss_dssp CTTSEEEEEECTT-----------S-----CHHHHHHHHHHHHHHTTTTSEEEEEEGGGGG------------GGCCC-S
T ss_pred CCCCEEEEecCCc-----------e-----eeeCCHHHHHHHHHhcccCcEEEEechhcCc------------cccCC-C
Confidence 4566799997763 1 288999888887777643 445566665430 00011 3
Q ss_pred CcccEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhhcCCcE-EEEecCcchhc---ccchhHHHHHHHHHHhC
Q psy13720 294 GEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRF-FLLENVRNFVA---FKNSMVLKMTMRCLTQI 369 (487)
Q Consensus 294 ~~vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~~~P~~-~ilENV~gl~~---~~~~~~~~~i~~~l~~~ 369 (487)
+.+|+|+...-.+.++ .+. ..++.++. +.++|.- +++.+. .... .........+.+.|.+.
T Consensus 62 ~~fD~V~~~~~l~~~~----------~~~-~~~l~~~~---r~LkpgG~l~~~~~-~~~~~~~~~~~~~~~~~~~~l~~a 126 (176)
T 2ld4_A 62 SSFDIILSGLVPGSTT----------LHS-AEILAEIA---RILRPGGCLFLKEP-VETAVDNNSKVKTASKLCSALTLS 126 (176)
T ss_dssp SCEEEEEECCSTTCCC----------CCC-HHHHHHHH---HHEEEEEEEEEEEE-EESSSCSSSSSCCHHHHHHHHHHT
T ss_pred CCEeEEEECChhhhcc----------cCH-HHHHHHHH---HHCCCCEEEEEEcc-cccccccccccCCHHHHHHHHHHC
Confidence 4799998653222110 111 33455544 4457753 333322 1110 00112357888999999
Q ss_pred CCeeEEEEEe
Q psy13720 370 GYQCTFGTLQ 379 (487)
Q Consensus 370 GY~~~~~~l~ 379 (487)
|+ +....+.
T Consensus 127 Gf-i~~~~~~ 135 (176)
T 2ld4_A 127 GL-VEVKELQ 135 (176)
T ss_dssp TC-EEEEEEE
T ss_pred CC-cEeecCc
Confidence 99 6644443
No 314
>1gtf_A Trp RNA-binding attenuation protein (trap); RNA binding protein-RNA complex, transcription attenuation, RNA-binding protein, Trp RNA; HET: TRP; 1.75A {Bacillus stearothermophilus} SCOP: b.82.5.1 PDB: 1c9s_A* 1gtn_A* 1qaw_A* 1utd_A* 1utf_A* 1utv_A* 2zp8_A* 3aqd_A 2zcz_A* 2zp9_A* 2zd0_A* 2ext_A* 2exs_A* 1wap_A*
Probab=27.87 E-value=71 Score=23.45 Aligned_cols=49 Identities=20% Similarity=0.299 Sum_probs=40.3
Q ss_pred EEEEeeeccccCCCCccccccCCCceEEecccceeecccceeeeeEEEeec
Q psy13720 95 LTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCED 145 (487)
Q Consensus 95 v~v~wfyRp~dt~~~~~~~~~~d~reLF~S~~~d~vp~~~I~GKC~V~~~~ 145 (487)
|.|--+-|..|| ...+...-|..|+....-.+-.+.-.|+||+.|...-
T Consensus 17 V~viGLTRG~dT--kFhHtEKLDkGEVmiaQFTehTSAiKiRGka~i~t~~ 65 (74)
T 1gtf_A 17 VNVIGLTRGADT--RFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRH 65 (74)
T ss_dssp EEEEEEECSSSC--CEEEEEEECTTCEEEEECCSSEEEEEEESSEEEEETT
T ss_pred eEEEEeccCCcc--cccchhhcCCCcEEEEEeccceeeEEEeccEEEEeec
Confidence 777789999999 4445556899999999888888888999999998653
No 315
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=25.96 E-value=4.3e+02 Score=25.09 Aligned_cols=152 Identities=11% Similarity=0.084 Sum_probs=87.8
Q ss_pred CCCeEeecccCchHHHHHHhh-cCCCcEEEEEcCcHHHHHHHHHhC----------CCCceeccchHHHHHHhhchhhhc
Q psy13720 216 RPLRCLEVFAGAGGLSRGLDK-SGVARSTWAIEFDSAAATAFKMNN----------PGCTVFVDDCNKILQRVIDNEVCD 284 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl~~-aG~~~~~~a~e~~~~a~~t~~~N~----------p~~~~~~~di~~~~~~~~~~~~~~ 284 (487)
.+-+||=|=.|.||...-+.. .+. +-+..||+|+..++.-+..+ |...++.+|...+++.
T Consensus 83 ~pk~VLIiGgGdG~~~revlk~~~v-~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~-------- 153 (294)
T 3o4f_A 83 HAKHVLIIGGGDGAMLREVTRHKNV-ESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQ-------- 153 (294)
T ss_dssp CCCEEEEESCTTSHHHHHHHTCTTC-CEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSC--------
T ss_pred CCCeEEEECCCchHHHHHHHHcCCc-ceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhh--------
Confidence 344678777788877766544 455 67889999999887766544 4455666676544211
Q ss_pred cccccCCCCCcccEEEccCCCcCcccCCccCCcccccchhHHHHHHHHHhhhcCCcEEEEecCcchhcccchhHHHHHHH
Q psy13720 285 DKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMR 364 (487)
Q Consensus 285 ~~~~~~p~~~~vd~i~ggpPCq~fS~~~~~~~~~~~d~r~~L~~~~l~~v~~~~P~~~ilENV~gl~~~~~~~~~~~i~~ 364 (487)
....+|+|+.-.+-.. +.+.. ......+. .+-+.++|.-+++=+...... ....+..+++
T Consensus 154 -------~~~~yDvIi~D~~dp~-~~~~~-------L~t~eFy~---~~~~~L~p~Gv~v~q~~sp~~--~~~~~~~~~~ 213 (294)
T 3o4f_A 154 -------TSQTFDVIISDCTDPI-GPGES-------LFTSAFYE---GCKRCLNPGGIFVAQNGVCFL--QQEEAIDSHR 213 (294)
T ss_dssp -------SSCCEEEEEESCCCCC-CTTCC-------SSCCHHHH---HHHHTEEEEEEEEEEEEESSS--CCHHHHHHHH
T ss_pred -------ccccCCEEEEeCCCcC-CCchh-------hcCHHHHH---HHHHHhCCCCEEEEecCCccc--ChHHHHHHHH
Confidence 1246899987765321 11111 11111222 233567899988877655432 2245667777
Q ss_pred HHHhCCCeeEEEEEeccCCCCCCcccEEEEEEEcC
Q psy13720 365 CLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAP 399 (487)
Q Consensus 365 ~l~~~GY~~~~~~l~a~~yGvPQ~R~R~fiia~~~ 399 (487)
.|.+..-.+......---|- .=...|++|++.
T Consensus 214 ~l~~~F~~v~~~~~~vPty~---~g~w~f~~as~~ 245 (294)
T 3o4f_A 214 KLSHYFSDVGFYQAAIPTYY---GGIMTFAWATDN 245 (294)
T ss_dssp HHHHHCSEEEEEEECCTTSS---SSCEEEEEEESC
T ss_pred HHHhhCCceeeeeeeeccCC---CcceeheeEECC
Confidence 77776555554443333331 134678888864
No 316
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=25.96 E-value=71 Score=31.04 Aligned_cols=57 Identities=18% Similarity=0.154 Sum_probs=35.4
Q ss_pred CcCCCCeEeecccCchHHHH----HHhh--------cCCCcEEEEEcCcHHHHHHHHHhCCCCceeccchHHHH
Q psy13720 213 SIARPLRCLEVFAGAGGLSR----GLDK--------SGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKIL 274 (487)
Q Consensus 213 ~~~~~l~~ldLFsG~Gg~s~----Gl~~--------aG~~~~~~a~e~~~~a~~t~~~N~p~~~~~~~di~~~~ 274 (487)
.| +++++.=+ |+|.++. ++.. .++ +++..+|.++..++.+...++-... ..|..+++
T Consensus 22 ~M-kkirvgiI--G~G~ig~~H~~a~~~~~~~~~~~~~~-~lvav~d~~~~~a~~~a~~~g~~~~-y~d~~ell 90 (393)
T 4fb5_A 22 SM-KPLGIGLI--GTGYMGKCHALAWNAVKTVFGDVERP-RLVHLAEANAGLAEARAGEFGFEKA-TADWRALI 90 (393)
T ss_dssp ---CCCEEEEE--CCSHHHHHHHHHHTTHHHHHCSSCCC-EEEEEECC--TTHHHHHHHHTCSEE-ESCHHHHH
T ss_pred CC-CCccEEEE--cCCHHHHHHHHHHHhhhhhhccCCCc-EEEEEECCCHHHHHHHHHHhCCCee-cCCHHHHh
Confidence 45 77888654 6776653 2221 244 8899999999988888887754333 36777775
No 317
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=24.84 E-value=49 Score=31.11 Aligned_cols=38 Identities=16% Similarity=0.126 Sum_probs=31.8
Q ss_pred CcCCCCeEeecccCchHHHH-HHhhcCCCcEEEEEcCcHH
Q psy13720 213 SIARPLRCLEVFAGAGGLSR-GLDKSGVARSTWAIEFDSA 251 (487)
Q Consensus 213 ~~~~~l~~ldLFsG~Gg~s~-Gl~~aG~~~~~~a~e~~~~ 251 (487)
.++...+++||=|+.||+|. ...+.|. .-|.|+|+-..
T Consensus 75 ~l~~g~~VvDLGaapGGWSq~~a~~~g~-~~V~avdvG~~ 113 (267)
T 3p8z_A 75 MVIPEGRVIDLGCGRGGWSYYCAGLKKV-TEVRGYTKGGP 113 (267)
T ss_dssp SSCCCEEEEEESCTTSHHHHHHHTSTTE-EEEEEECCCST
T ss_pred CCCCCCEEEEcCCCCCcHHHHHHHhcCC-CEEEEEecCCC
Confidence 44567799999999999998 7778886 78899999754
No 318
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=24.18 E-value=82 Score=29.46 Aligned_cols=43 Identities=19% Similarity=0.288 Sum_probs=30.4
Q ss_pred CCCeEeecccCchHHHHHH----hh--cCCCc-EEEEEcCcHHHHHHHHHh
Q psy13720 216 RPLRCLEVFAGAGGLSRGL----DK--SGVAR-STWAIEFDSAAATAFKMN 259 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~Gl----~~--aG~~~-~~~a~e~~~~a~~t~~~N 259 (487)
+..+|||+=||.|.++.-+ .. .+. . .+.++|.++..++..+.+
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~-~v~~~~vD~S~~ml~~a~~~ 101 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGV-CINNEVVEPSAEQIAKYKEL 101 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTC-EEEEEEECSCHHHHHHHHHH
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCc-eeeEEEEeCCHHHHHHHHHH
Confidence 4578999999999876532 11 232 2 248999999988877665
No 319
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=23.97 E-value=1.3e+02 Score=28.73 Aligned_cols=57 Identities=14% Similarity=0.188 Sum_probs=36.1
Q ss_pred CCCeEeecccCchHH---HHHHhhcCCCcEEEEEcCcHHHHHHHHHhCCCCceeccchHHHH
Q psy13720 216 RPLRCLEVFAGAGGL---SRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKIL 274 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~---s~Gl~~aG~~~~~~a~e~~~~a~~t~~~N~p~~~~~~~di~~~~ 274 (487)
+++++.=+=+|..|. ...+...|+ +++..+|.++..++.+...++....+ .|..+++
T Consensus 3 ~~~rvgiiG~G~~~~~~~~~~l~~~~~-~lvav~d~~~~~~~~~a~~~~~~~~~-~~~~~ll 62 (336)
T 2p2s_A 3 KKIRFAAIGLAHNHIYDMCQQLIDAGA-ELAGVFESDSDNRAKFTSLFPSVPFA-ASAEQLI 62 (336)
T ss_dssp -CCEEEEECCSSTHHHHHHHHHHHTTC-EEEEEECSCTTSCHHHHHHSTTCCBC-SCHHHHH
T ss_pred CccEEEEECCChHHHHHhhhhhcCCCc-EEEEEeCCCHHHHHHHHHhcCCCccc-CCHHHHh
Confidence 355665443343332 234445687 88999999998888888877655443 5777765
No 320
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=23.35 E-value=88 Score=30.32 Aligned_cols=56 Identities=14% Similarity=-0.043 Sum_probs=35.8
Q ss_pred CCCeEeecccCchHHHHH----Hhhc-C------CCcEEEEEcCcHHHHHHHHHhCCCCceeccchHHHH
Q psy13720 216 RPLRCLEVFAGAGGLSRG----LDKS-G------VARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKIL 274 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~G----l~~a-G------~~~~~~a~e~~~~a~~t~~~N~p~~~~~~~di~~~~ 274 (487)
.++++.=+ |+|.++.. +... + ..+++..+|.++..++.+...++-..++ .|..+++
T Consensus 5 ~klrvgiI--G~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~a~~~a~~~g~~~~~-~d~~~ll 71 (390)
T 4h3v_A 5 TNLGIGLI--GYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEAVRAAAGKLGWSTTE-TDWRTLL 71 (390)
T ss_dssp CEEEEEEE--CHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHHHHHHHHHHTCSEEE-SCHHHHT
T ss_pred CcCcEEEE--cCCHHHHHHHHHHHhCccccccccCceEEEEEcCCHHHHHHHHHHcCCCccc-CCHHHHh
Confidence 45666543 88876543 2221 1 1278899999999999888877544333 5776663
No 321
>2a7y_A Hypothetical protein RV2302/MT2359; anti-parallel beta sheet, structural genomics, PSI, protein structure initiative; NMR {Mycobacterium tuberculosis} SCOP: b.34.6.3
Probab=21.74 E-value=74 Score=24.45 Aligned_cols=27 Identities=11% Similarity=-0.038 Sum_probs=20.0
Q ss_pred CCCCceEEEEEEEEecCCCCCCCCCceEEEEEee
Q psy13720 67 TPAPFGIGYIVAIFKKKGKKNVSASDVFLTVKKF 100 (487)
Q Consensus 67 ~~~P~~IgrI~~i~~~~~~~~~~~~~~~v~v~wf 100 (487)
.++|-..|.|+++.-. .+..-+.|+|+
T Consensus 19 vg~~~R~GeIvEV~g~-------dG~PPY~VRw~ 45 (83)
T 2a7y_A 19 TERHDQHAEIIEVRSA-------DGSPPYVVRWL 45 (83)
T ss_dssp TSCCEEEEEEEECSCS-------SSCSCEEEEET
T ss_pred CCCCCcEEEEEEEECC-------CCCCCEEEEec
Confidence 5778899999997432 25566789995
No 322
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=21.39 E-value=1.6e+02 Score=28.29 Aligned_cols=48 Identities=13% Similarity=0.122 Sum_probs=32.1
Q ss_pred ccCchHHHHH----Hhhc-CCCcEEEEEcCcHHHHHHHHHhCCCCceeccchHHHH
Q psy13720 224 FAGAGGLSRG----LDKS-GVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKIL 274 (487)
Q Consensus 224 FsG~Gg~s~G----l~~a-G~~~~~~a~e~~~~a~~t~~~N~p~~~~~~~di~~~~ 274 (487)
+-|+|.++.. |... |+ +++..+|.++..++.+...++ .. ...|..+++
T Consensus 9 iiG~G~~g~~~~~~l~~~~~~-~l~av~d~~~~~~~~~a~~~g-~~-~~~~~~~~l 61 (344)
T 3euw_A 9 LFGAGRIGHVHAANIAANPDL-ELVVIADPFIEGAQRLAEANG-AE-AVASPDEVF 61 (344)
T ss_dssp EECCSHHHHHHHHHHHHCTTE-EEEEEECSSHHHHHHHHHTTT-CE-EESSHHHHT
T ss_pred EECCcHHHHHHHHHHHhCCCc-EEEEEECCCHHHHHHHHHHcC-Cc-eeCCHHHHh
Confidence 4567765443 4443 65 788899999999888887775 33 335666654
No 323
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=20.98 E-value=1.9e+02 Score=23.65 Aligned_cols=36 Identities=14% Similarity=0.131 Sum_probs=25.7
Q ss_pred ccCchHHHHHHh----hcCCCcEEEEEcCcHHHHHHHHHhCC
Q psy13720 224 FAGAGGLSRGLD----KSGVARSTWAIEFDSAAATAFKMNNP 261 (487)
Q Consensus 224 FsG~Gg~s~Gl~----~aG~~~~~~a~e~~~~a~~t~~~N~p 261 (487)
+-|+|++...+- ..|+ + +..+|.++..++.+...+.
T Consensus 26 iiG~G~iG~~~a~~l~~~g~-~-v~v~~r~~~~~~~~a~~~~ 65 (144)
T 3oj0_A 26 LVGNGMLASEIAPYFSYPQY-K-VTVAGRNIDHVRAFAEKYE 65 (144)
T ss_dssp EECCSHHHHHHGGGCCTTTC-E-EEEEESCHHHHHHHHHHHT
T ss_pred EECCCHHHHHHHHHHHhCCC-E-EEEEcCCHHHHHHHHHHhC
Confidence 458888876653 3576 6 7889999888777766554
No 324
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=20.97 E-value=1.6e+02 Score=27.61 Aligned_cols=54 Identities=11% Similarity=0.105 Sum_probs=35.5
Q ss_pred CCCeEeecccCchHHHHH-----Hhh-cCCCcEEEEEcCcHHHHHHHHHhCCCCceeccchHHHH
Q psy13720 216 RPLRCLEVFAGAGGLSRG-----LDK-SGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKIL 274 (487)
Q Consensus 216 ~~l~~ldLFsG~Gg~s~G-----l~~-aG~~~~~~a~e~~~~a~~t~~~N~p~~~~~~~di~~~~ 274 (487)
+++++. +-|+|.++.. +.. .|+ +++..+|.++..++.+...++- .. ..|..+++
T Consensus 5 ~~~~ig--iIG~G~~g~~~~~~~l~~~~~~-~l~av~d~~~~~~~~~a~~~~~-~~-~~~~~~ll 64 (308)
T 3uuw_A 5 KNIKMG--MIGLGSIAQKAYLPILTKSERF-EFVGAFTPNKVKREKICSDYRI-MP-FDSIESLA 64 (308)
T ss_dssp CCCEEE--EECCSHHHHHHTHHHHTSCSSS-EEEEEECSCHHHHHHHHHHHTC-CB-CSCHHHHH
T ss_pred ccCcEE--EEecCHHHHHHHHHHHHhCCCe-EEEEEECCCHHHHHHHHHHcCC-CC-cCCHHHHH
Confidence 456665 5577776654 333 355 7888999999988887766542 22 45666665
No 325
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=20.89 E-value=52 Score=31.90 Aligned_cols=38 Identities=11% Similarity=0.104 Sum_probs=31.2
Q ss_pred CcCCCCeEeecccCchHHHH-HHhhcCCCcEEEEEcCcHH
Q psy13720 213 SIARPLRCLEVFAGAGGLSR-GLDKSGVARSTWAIEFDSA 251 (487)
Q Consensus 213 ~~~~~l~~ldLFsG~Gg~s~-Gl~~aG~~~~~~a~e~~~~ 251 (487)
.++...+++||=|+.||++. ...+.|. .-|.|+|+-..
T Consensus 91 ~l~~~~~VlDLGaapGGwsq~~~~~~gv-~~V~avdvG~~ 129 (321)
T 3lkz_A 91 FLEPVGKVIDLGCGRGGWCYYMATQKRV-QEVRGYTKGGP 129 (321)
T ss_dssp SCCCCEEEEEETCTTCHHHHHHTTCTTE-EEEEEECCCST
T ss_pred CCCCCCEEEEeCCCCCcHHHHHHhhcCC-CEEEEEEcCCC
Confidence 44566699999999999998 7777886 68899999754
No 326
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=20.30 E-value=1.8e+02 Score=27.83 Aligned_cols=49 Identities=18% Similarity=0.293 Sum_probs=32.7
Q ss_pred ccCchHHHH----HHh-h-cCCCcEEEEEcCcHHHHHHHHHhCC-CCceeccchHHHH
Q psy13720 224 FAGAGGLSR----GLD-K-SGVARSTWAIEFDSAAATAFKMNNP-GCTVFVDDCNKIL 274 (487)
Q Consensus 224 FsG~Gg~s~----Gl~-~-aG~~~~~~a~e~~~~a~~t~~~N~p-~~~~~~~di~~~~ 274 (487)
+-|+|.++. ++. . .|+ +++..+|.++..++.+...++ ... ...|..+++
T Consensus 7 iIG~G~~g~~~~~~l~~~~~~~-~l~av~d~~~~~~~~~~~~~g~~~~-~~~~~~~ll 62 (344)
T 3mz0_A 7 VIGTGAIGKEHINRITNKLSGA-EIVAVTDVNQEAAQKVVEQYQLNAT-VYPNDDSLL 62 (344)
T ss_dssp EECCSHHHHHHHHHHHHTCSSE-EEEEEECSSHHHHHHHHHHTTCCCE-EESSHHHHH
T ss_pred EECccHHHHHHHHHHHhhCCCc-EEEEEEcCCHHHHHHHHHHhCCCCe-eeCCHHHHh
Confidence 457776543 344 3 465 788899999999888887775 233 345777665
Done!