Your job contains 1 sequence.
>psy13720
LYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYM
KGSNAYTPAPFGIGYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNK
LYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPT
EALFLGSVSKGKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVA
RSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLC
GGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLK
MTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQL
NVTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREKV
WKCYSKI
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy13720
(487 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
MGI|MGI:94912 - symbol:Dnmt1 "DNA methyltransferase (cyto... 1317 3.5e-137 2
ZFIN|ZDB-GENE-990714-15 - symbol:dnmt1 "DNA (cytosine-5-)... 1305 6.6e-136 2
UNIPROTKB|Q92072 - symbol:DNMT1 "DNA (cytosine-5)-methylt... 1290 6.7e-134 2
UNIPROTKB|Q24K09 - symbol:DNMT1 "DNA (cytosine-5)-methylt... 1288 1.1e-133 2
UNIPROTKB|F1S3I5 - symbol:DNMT1 "Cytosine-specific methyl... 1286 1.1e-133 2
RGD|620979 - symbol:Dnmt1 "DNA (cytosine-5-)-methyltransf... 1283 4.7e-133 2
UNIPROTKB|Q9Z330 - symbol:Dnmt1 "DNA (cytosine-5)-methylt... 1283 4.7e-133 2
UNIPROTKB|E2RHC6 - symbol:DNMT1 "Cytosine-specific methyl... 1270 8.7e-132 2
UNIPROTKB|F5GX68 - symbol:DNMT1 "Cytosine-specific methyl... 1266 2.3e-131 2
UNIPROTKB|P26358 - symbol:DNMT1 "DNA (cytosine-5)-methylt... 1266 2.3e-131 2
UNIPROTKB|D4A8Z6 - symbol:Dnmt1 "Cytosine-specific methyl... 939 1.0e-94 2
TAIR|locus:2155959 - symbol:MET1 "methyltransferase 1" sp... 506 2.5e-72 3
UNIPROTKB|Q7Y1I7 - symbol:MET1A "DNA (cytosine-5)-methylt... 509 8.5e-70 2
TAIR|locus:2122313 - symbol:AT4G08990 species:3702 "Arabi... 463 4.1e-65 2
UNIPROTKB|K7ENW7 - symbol:DNMT1 "DNA (cytosine-5)-methylt... 635 3.8e-62 1
TAIR|locus:2140892 - symbol:MEE57 "maternal effect embryo... 435 1.3e-61 2
UNIPROTKB|F1PAS9 - symbol:DNMT1 "Uncharacterized protein"... 512 4.1e-49 1
UNIPROTKB|D4A0P3 - symbol:Dnmt1 "DNA (cytosine-5)-methylt... 440 2.1e-41 2
TAIR|locus:2117104 - symbol:CMT2 "chromomethylase 2" spec... 250 3.2e-23 2
TAIR|locus:2205015 - symbol:CMT3 "chromomethylase 3" spec... 260 4.1e-22 2
TAIR|locus:2025787 - symbol:CMT1 "chromomethylase 1" spec... 250 6.8e-20 2
TIGR_CMR|SPO_1049 - symbol:SPO_1049 "DNA methylase, C-5 c... 194 2.6e-15 2
UNIPROTKB|O34939 - symbol:ydiO "Probable BsuMI modificati... 161 1.0e-08 1
UNIPROTKB|P0AED9 - symbol:dcm "DNA-cytosine methyltransfe... 148 3.4e-07 1
UNIPROTKB|Q2KFY7 - symbol:MGCH7_ch7g548 "Putative unchara... 155 1.4e-06 2
UNIPROTKB|E2RM86 - symbol:TRDMT1 "Uncharacterized protein... 134 8.6e-06 1
UNIPROTKB|O14717 - symbol:TRDMT1 "tRNA (cytosine(38)-C(5)... 133 1.1e-05 1
RGD|1306292 - symbol:Trdmt1 "tRNA aspartic acid methyltra... 131 1.8e-05 1
UNIPROTKB|Q7YS61 - symbol:TRDMT1 "tRNA (cytosine-5-)-meth... 125 8.5e-05 1
MGI|MGI:1274787 - symbol:Trdmt1 "tRNA aspartic acid methy... 122 0.00020 1
UNIPROTKB|Q9KMW8 - symbol:VC_A0198 "Site-specific DNA-met... 116 0.00081 1
TIGR_CMR|VC_A0198 - symbol:VC_A0198 "site-specific DNA-me... 116 0.00081 1
>MGI|MGI:94912 [details] [associations]
symbol:Dnmt1 "DNA methyltransferase (cytosine-5) 1"
species:10090 "Mus musculus" [GO:0000792 "heterochromatin"
evidence=IDA] [GO:0003677 "DNA binding" evidence=ISO;IDA]
[GO:0003690 "double-stranded DNA binding" evidence=ISO] [GO:0003723
"RNA binding" evidence=IDA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003886 "DNA (cytosine-5-)-methyltransferase
activity" evidence=ISO;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005657
"replication fork" evidence=IDA] [GO:0005721 "centromeric
heterochromatin" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006306 "DNA methylation" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0008152 "metabolic process" evidence=IEA]
[GO:0008168 "methyltransferase activity" evidence=IDA] [GO:0008270
"zinc ion binding" evidence=IDA] [GO:0008327 "methyl-CpG binding"
evidence=ISO;IDA] [GO:0009008 "DNA-methyltransferase activity"
evidence=ISO] [GO:0010216 "maintenance of DNA methylation"
evidence=ISO;IMP] [GO:0010424 "DNA methylation on cytosine within a
CG sequence" evidence=ISO] [GO:0010468 "regulation of gene
expression" evidence=IMP] [GO:0010628 "positive regulation of gene
expression" evidence=ISO] [GO:0016458 "gene silencing"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0019904
"protein domain specific binding" evidence=ISO] [GO:0032259
"methylation" evidence=IEA] [GO:0042127 "regulation of cell
proliferation" evidence=IGI] [GO:0042826 "histone deacetylase
binding" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045322 "unmethylated CpG binding" evidence=ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IMP;IDA] [GO:0046498 "S-adenosylhomocysteine metabolic
process" evidence=ISO] [GO:0046499 "S-adenosylmethioninamine
metabolic process" evidence=ISO] [GO:0046500 "S-adenosylmethionine
metabolic process" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=ISO] [GO:0051573 "negative regulation of
histone H3-K9 methylation" evidence=ISO] [GO:0051718 "DNA
(cytosine-5-)-methyltransferase activity, acting on CpG substrates"
evidence=ISO] [GO:0071230 "cellular response to amino acid
stimulus" evidence=IDA] [GO:0090116 "C-5 methylation of cytosine"
evidence=IDA] InterPro:IPR001025 InterPro:IPR001525
InterPro:IPR002857 InterPro:IPR010506 InterPro:IPR017198
InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426 Pfam:PF02008
Pfam:PF06464 PIRSF:PIRSF037404 PRINTS:PR00105 PROSITE:PS00094
PROSITE:PS00095 PROSITE:PS51038 PROSITE:PS51058 SMART:SM00439
MGI:MGI:94912 GO:GO:0005634 GO:GO:0005737 GO:GO:0045892
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 GO:GO:0016568
GO:GO:0003723 GO:GO:0042127 GO:GO:0010628 GO:GO:0005721
GO:GO:0071230 GO:GO:0016458 GO:GO:0005657 GO:GO:0051573
GO:GO:0051571 eggNOG:COG0270 KO:K00558 GO:GO:0003886
PANTHER:PTHR10629 GO:GO:0010216 InterPro:IPR022702 Pfam:PF12047
BRENDA:2.1.1.37 CTD:1786 GeneTree:ENSGT00390000005100
HOVERGEN:HBG051384 OMA:SENWAME OrthoDB:EOG4T1HKN GO:GO:0008327
ChiTaRS:DNMT1 EMBL:X14805 EMBL:AF175432 EMBL:AF162282 EMBL:AF175431
EMBL:AF175412 EMBL:AF175413 EMBL:AF175414 EMBL:AF244089
EMBL:AF244090 EMBL:AF175416 EMBL:AF175417 EMBL:AF175418
EMBL:AF175419 EMBL:AF175420 EMBL:AF175421 EMBL:AF175422
EMBL:AF175423 EMBL:AF234317 EMBL:AF175424 EMBL:AF175425
EMBL:AF175426 EMBL:AF234318 EMBL:AF175427 EMBL:AF175428
EMBL:AF175429 EMBL:AF175430 EMBL:BC048148 EMBL:AF036007
EMBL:AF036008 EMBL:U70051 EMBL:AK013247 IPI:IPI00474974
IPI:IPI00990173 PIR:S01845 RefSeq:NP_001186360.2
RefSeq:NP_001186361.1 RefSeq:NP_001186362.1 RefSeq:NP_034196.5
UniGene:Mm.128580 PDB:3AV4 PDB:3AV5 PDB:3AV6 PDB:3PT6 PDB:3PT9
PDB:4DA4 PDBsum:3AV4 PDBsum:3AV5 PDBsum:3AV6 PDBsum:3PT6
PDBsum:3PT9 PDBsum:4DA4 ProteinModelPortal:P13864 SMR:P13864
IntAct:P13864 STRING:P13864 REBASE:2844 PhosphoSite:P13864
PaxDb:P13864 PRIDE:P13864 Ensembl:ENSMUST00000004202
Ensembl:ENSMUST00000178110 GeneID:13433 KEGG:mmu:13433
UCSC:uc009ojo.2 UCSC:uc009ojq.2 InParanoid:P13864
EvolutionaryTrace:P13864 NextBio:283859 Bgee:P13864
CleanEx:MM_DNMT1 Genevestigator:P13864
GermOnline:ENSMUSG00000004099 Uniprot:P13864
Length = 1620
Score = 1317 (468.7 bits), Expect = 3.5e-137, Sum P(2) = 3.5e-137
Identities = 262/484 (54%), Positives = 330/484 (68%)
Query: 1 LYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYM 60
+Y + ++ G Y+L VY+ P+ F F K S V+ K+ +E LYPE YRK SDY+
Sbjct: 925 VYCSSITKNGVVYRLGDSVYLPPEAFTFNIKVASPVKRPKKDPVNETLYPEHYRKYSDYI 984
Query: 61 KGSNAYTPAPFGIGYIVAIF--KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDL 118
KGSN P P+ IG I I KKKGK V+ +D+ L + KFYRPENTHRS +Y D+
Sbjct: 985 KGSNLDAPEPYRIGRIKEIHCGKKKGK--VNEADIKLRLYKFYRPENTHRSYNGSYHTDI 1042
Query: 119 NKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNL 178
N LYWSDEE V+ SDVQG+C V ++L S +S GP RFYF EAYNSKT+ F +
Sbjct: 1043 NMLYWSDEEAVVNFSDVQGRCTVEYGEDLLESIQDYSQGGPDRFYFLEAYNSKTKNFEDP 1102
Query: 179 PTEALFLXXXXXXXXXXX----NQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGL 234
P A +Q ++P+E + + P LR L+VF+G GGLS G
Sbjct: 1103 PNHARSPGNKGKGKGKGKGKGKHQVSEPKEPEAAIKLPK----LRTLDVFSGCGGLSEGF 1158
Query: 235 DKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKG 294
++G++ + WAIE AA AF++NNPG TVF +DCN +L+ V+ EV + Q+LP+KG
Sbjct: 1159 HQAGISETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLVMAGEVTNSLGQRLPQKG 1218
Query: 295 EVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFK 354
+VEMLCGGPPCQGFSGMNRFN R YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+++
Sbjct: 1219 DVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSYR 1278
Query: 355 NSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFS 414
SMVLK+T+RCL ++GYQCTFG LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+
Sbjct: 1279 RSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFA 1338
Query: 415 PRTSQLNVTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSH 474
PR QL+V + K +VS S P+RTITVRD MSDLPEIQNG E+PY LS
Sbjct: 1339 PRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEIQNGASNSEIPYNGEPLSW 1398
Query: 475 FQRE 478
FQR+
Sbjct: 1399 FQRQ 1402
Score = 47 (21.6 bits), Expect = 3.5e-137, Sum P(2) = 3.5e-137
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 2 YYNCVSYEGEQYKLKSCVYVNPD 24
YY VS + E ++ CV V PD
Sbjct: 749 YYQKVSIDEEMLEVGDCVSVIPD 771
>ZFIN|ZDB-GENE-990714-15 [details] [associations]
symbol:dnmt1 "DNA (cytosine-5-)-methyltransferase 1"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0090116 "C-5 methylation of cytosine" evidence=IEA] [GO:0006306
"DNA methylation" evidence=IEA;IMP] [GO:0008168 "methyltransferase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003886 "DNA
(cytosine-5-)-methyltransferase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0032776 "DNA
methylation on cytosine" evidence=IMP] [GO:0035622 "intrahepatic
bile duct development" evidence=IMP] [GO:0044030 "regulation of DNA
methylation" evidence=IMP] [GO:0031017 "exocrine pancreas
development" evidence=IMP] [GO:0048565 "digestive tract
development" evidence=IMP] [GO:0010842 "retina layer formation"
evidence=IMP] [GO:0051216 "cartilage development" evidence=IMP]
[GO:0002088 "lens development in camera-type eye" evidence=IMP]
[GO:0060042 "retina morphogenesis in camera-type eye" evidence=IMP]
[GO:0051567 "histone H3-K9 methylation" evidence=IMP] [GO:0016740
"transferase activity" evidence=IEA] [GO:0032259 "methylation"
evidence=IEA] InterPro:IPR001025 InterPro:IPR001525
InterPro:IPR002857 InterPro:IPR010506 InterPro:IPR017198
InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426 Pfam:PF02008
Pfam:PF06464 PIRSF:PIRSF037404 PRINTS:PR00105 PROSITE:PS00094
PROSITE:PS00095 PROSITE:PS51038 PROSITE:PS51058 SMART:SM00439
ZFIN:ZDB-GENE-990714-15 GO:GO:0005634 GO:GO:0003677 GO:GO:0008270
GO:GO:0051216 GO:GO:0051567 GO:GO:0010842 GO:GO:0048565
GO:GO:0044030 GO:GO:0032776 GO:GO:0002088 GO:GO:0031017
GO:GO:0003886 PANTHER:PTHR10629 InterPro:IPR022702 Pfam:PF12047
GeneTree:ENSGT00390000005100 OMA:SENWAME GO:GO:0035622
EMBL:CU571160 IPI:IPI00486841 Ensembl:ENSDART00000021977
ArrayExpress:F1RCN0 Bgee:F1RCN0 Uniprot:F1RCN0
Length = 1500
Score = 1305 (464.4 bits), Expect = 6.6e-136, Sum P(2) = 6.6e-136
Identities = 257/484 (53%), Positives = 330/484 (68%)
Query: 1 LYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVE-DEELYPEAYRKLSDY 59
++Y V+Y+GEQYK+ VY+ P+ F F K S V+ + R + DE+LYPE YRK SDY
Sbjct: 801 VFYGLVNYKGEQYKVGDSVYLPPEAFNFVVKAASPVKRSHRKDDVDEDLYPEYYRKSSDY 860
Query: 60 MKGSNAYTPAPFGIGYIVAIF-KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDL 118
+KGSN P PF IG I IF K+ S++ L + KFYRPENTH+ + Y D+
Sbjct: 861 IKGSNLDAPQPFRIGRIKEIFCNKRSNGKPDTSEIKLRLYKFYRPENTHKGPKGAYHSDI 920
Query: 119 NKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNL 178
N+LYWSDEE VS+++V +C V ++L S +S++GP RFYF EAYN+KT+ F +
Sbjct: 921 NQLYWSDEEATVSMTEVLTRCRVEYAEDLVESVQDYSNKGPDRFYFLEAYNAKTKSFEDP 980
Query: 179 PTEALFLXXXXXXXXXXXNQTN---KPEE-KDEITEWPSIARPLRCLEVFAGAGGLSRGL 234
P A + P+E +D+ + P + + LR L+VF+G GGLS G
Sbjct: 981 PNHARSAVNKGKGKGKGKGKGKGKAAPQEPQDQEPQEPVVPK-LRTLDVFSGCGGLSEGF 1039
Query: 235 DKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKG 294
++G++ + WAIE AA AF++NNPG TVF +DCN +L+ V+ E + QKLP+KG
Sbjct: 1040 HQAGISETHWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLVMSGEKTNSLGQKLPQKG 1099
Query: 295 EVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFK 354
+VEMLCGGPPCQGFSGMNRFN R YS FKNSL+VSYLSYCDYYRP+FFLLENVRNFV+FK
Sbjct: 1100 DVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSYLSYCDYYRPKFFLLENVRNFVSFK 1159
Query: 355 NSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFS 414
SMVLK+T+RCL ++GYQCTFG LQAG +GV+QTRRRAI+LAAAPGE LP+YPEP VF+
Sbjct: 1160 RSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPRYPEPLHVFA 1219
Query: 415 PRTSQLNVTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSH 474
PR L+V + +K YVS YRTITVRD MSDLPEI+NG E+ Y S
Sbjct: 1220 PRACSLSVAVDEKKYVSNVTRGNGGIYRTITVRDTMSDLPEIRNGAAALEISYNGEPQSW 1279
Query: 475 FQRE 478
FQR+
Sbjct: 1280 FQRQ 1283
Score = 47 (21.6 bits), Expect = 6.6e-136, Sum P(2) = 6.6e-136
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 2 YYNCVSYEGEQYKLKSCVYVNPD 24
YY V E E ++ CV V+PD
Sbjct: 626 YYMKVRVENEVLEVGDCVSVSPD 648
>UNIPROTKB|Q92072 [details] [associations]
symbol:DNMT1 "DNA (cytosine-5)-methyltransferase 1"
species:9031 "Gallus gallus" [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003886 "DNA (cytosine-5-)-methyltransferase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001025
InterPro:IPR001525 InterPro:IPR002857 InterPro:IPR010506
InterPro:IPR017198 InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426
Pfam:PF02008 Pfam:PF06464 PIRSF:PIRSF037404 PRINTS:PR00105
PROSITE:PS00094 PROSITE:PS00095 PROSITE:PS51038 PROSITE:PS51058
SMART:SM00439 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 KO:K00558 GO:GO:0003886
PANTHER:PTHR10629 InterPro:IPR022702 Pfam:PF12047 CTD:1786
HOVERGEN:HBG051384 EMBL:D43920 IPI:IPI00588424 PIR:JC4172
RefSeq:NP_996835.1 UniGene:Gga.1206 ProteinModelPortal:Q92072
REBASE:3020 PRIDE:Q92072 GeneID:396011 KEGG:gga:396011
NextBio:20816074 Uniprot:Q92072
Length = 1537
Score = 1290 (459.2 bits), Expect = 6.7e-134, Sum P(2) = 6.7e-134
Identities = 259/485 (53%), Positives = 326/485 (67%)
Query: 1 LYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYM 60
++Y + G QY++ VY+ P+ F F KP S + K+ DE+LYPE YRK S+Y+
Sbjct: 832 MFYAMATKNGVQYRVGDSVYLLPEAFSFSMKPASPAKRPKKEAVDEDLYPEHYRKYSEYI 891
Query: 61 KGSNAYTPAPFGIGYIVAIF---KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLD 117
KGSN P P+ +G I IF + GK N +D+ L + KFYRPENTH+S++ TY D
Sbjct: 892 KGSNLDAPDPYRVGRIKEIFCHIRTNGKPN--EADIKLRIWKFYRPENTHKSMKATYHAD 949
Query: 118 LNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTN 177
+N LYWSDEE V VQG+C VV ++L S +S+ G RFYF EAYN+KT+ F +
Sbjct: 950 INLLYWSDEETTVDFCAVQGRCTVVYGEDLTESIQDYSAGGLDRFYFLEAYNAKTKSFED 1009
Query: 178 LPTEALFLXXXXXXXXXXXNQ-TNKPEEKDEITE-WPS-IARP-LRCLEVFAGAGGLSRG 233
P A + K E +E P+ + P LR L+VF+G GGLS G
Sbjct: 1010 PPNHARSSGNKGKGKGKGKGKGKGKSSTTCEQSEPEPTELKLPKLRTLDVFSGCGGLSEG 1069
Query: 234 LDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRK 293
++GV+ + WAIE AA AF++NNPG TVF +DCN +L+ V+ E + QKLP+K
Sbjct: 1070 FHQAGVSETLWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLLKLVMSGEKTNSLGQKLPQK 1129
Query: 294 GEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAF 353
G+VEMLCGGPPCQGFSGMNRFN R YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+F
Sbjct: 1130 GDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSF 1189
Query: 354 KNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVF 413
K SMVLK+T+RCL ++GYQCTFG LQAG +GV+QTRRRAIVLAAAPGE LP +PEP VF
Sbjct: 1190 KRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIVLAAAPGEKLPMFPEPLHVF 1249
Query: 414 SPRTSQLNVTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALS 473
+PR QL+V + K +VS T S P+RTITVRD MSDLPEI+NG E+ Y S
Sbjct: 1250 APRACQLSVVVDDKKFVSNITRTYSGPFRTITVRDTMSDLPEIRNGASALEISYNGEPQS 1309
Query: 474 HFQRE 478
FQR+
Sbjct: 1310 WFQRQ 1314
Score = 43 (20.2 bits), Expect = 6.7e-134, Sum P(2) = 6.7e-134
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 2 YYNCVSYEGEQYKLKSCVYVNPD 24
+Y V + E ++ CV V+PD
Sbjct: 658 FYQRVCIDSETLEVGDCVSVSPD 680
>UNIPROTKB|Q24K09 [details] [associations]
symbol:DNMT1 "DNA (cytosine-5)-methyltransferase 1"
species:9913 "Bos taurus" [GO:0003886 "DNA
(cytosine-5-)-methyltransferase activity" evidence=ISS] [GO:0010216
"maintenance of DNA methylation" evidence=ISS] [GO:0005634
"nucleus" evidence=IEA] [GO:0071230 "cellular response to amino
acid stimulus" evidence=IEA] [GO:0051573 "negative regulation of
histone H3-K9 methylation" evidence=IEA] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0042127 "regulation of cell proliferation" evidence=IEA]
[GO:0016458 "gene silencing" evidence=IEA] [GO:0010628 "positive
regulation of gene expression" evidence=IEA] [GO:0008327
"methyl-CpG binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0005657 "replication fork" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] InterPro:IPR001025 InterPro:IPR001525
InterPro:IPR002857 InterPro:IPR010506 InterPro:IPR017198
InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426 Pfam:PF02008
Pfam:PF06464 PIRSF:PIRSF037404 PRINTS:PR00105 PROSITE:PS00094
PROSITE:PS00095 PROSITE:PS51038 PROSITE:PS51058 SMART:SM00439
GO:GO:0005634 GO:GO:0045892 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 GO:GO:0003723 GO:GO:0042127
GO:GO:0010628 GO:GO:0005721 GO:GO:0071230 GO:GO:0016458
GO:GO:0005657 GO:GO:0051573 GO:GO:0051571 eggNOG:COG0270 KO:K00558
GO:GO:0003886 PANTHER:PTHR10629 GO:GO:0010216 InterPro:IPR022702
Pfam:PF12047 EMBL:AY244709 EMBL:AY173048 EMBL:BC114063
IPI:IPI00711805 RefSeq:NP_872592.2 UniGene:Bt.108052
UniGene:Bt.48560 ProteinModelPortal:Q24K09 STRING:Q24K09
REBASE:7406 PRIDE:Q24K09 Ensembl:ENSBTAT00000003549 GeneID:281119
KEGG:bta:281119 CTD:1786 GeneTree:ENSGT00390000005100
HOGENOM:HOG000082497 HOVERGEN:HBG051384 InParanoid:Q24K09
OMA:SENWAME OrthoDB:EOG4T1HKN NextBio:20805188 GO:GO:0008327
Uniprot:Q24K09
Length = 1611
Score = 1288 (458.5 bits), Expect = 1.1e-133, Sum P(2) = 1.1e-133
Identities = 259/481 (53%), Positives = 323/481 (67%)
Query: 3 YNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQN-NKRPVEDEELYPEAYRKLSDYMK 61
Y+ + G QY++ VY+ P+ F F K S V+ K PV DE LYPE YRK SDY+K
Sbjct: 920 YSLATKNGVQYRVGDGVYLPPEAFTFNIKLSSPVKRPRKEPV-DEALYPEHYRKYSDYIK 978
Query: 62 GSNAYTPAPFGIGYIVAIF-KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNK 120
GSN P P+ IG I IF KK + +D+ + V KFYRPENTH+S +Y D+N
Sbjct: 979 GSNLDAPEPYRIGRIKEIFCSKKSNGRPNETDIKIRVNKFYRPENTHKSTPASYHADINL 1038
Query: 121 LYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPT 180
LYWSDEE V VQG+C V ++L +S+ GP RFYF EAYN+K++ F + P
Sbjct: 1039 LYWSDEEAVVDFKAVQGRCTVEYGEDLPQCLQDFSAGGPDRFYFLEAYNAKSKSFEDPPN 1098
Query: 181 EALFLXXXXXXXXXXXNQTNKPE-EKDEI-TEWPSIARP-LRCLEVFAGAGGLSRGLDKS 237
A N+T E E+ TE I P LR L+VF+G GGLS G ++
Sbjct: 1099 HARSTGNKGKGKGKGKNRTKSQTCEPSELETE---IKLPKLRTLDVFSGCGGLSEGFHQA 1155
Query: 238 GVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVE 297
G++ + WAIE AA AF++NNPG TVF +DCN +L+ V+ EV + + QKLP+KG+VE
Sbjct: 1156 GISETLWAIEMWDPAAQAFRLNNPGSTVFTEDCNVLLKLVMAGEVTNSRGQKLPQKGDVE 1215
Query: 298 MLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSM 357
MLCGGPPCQGFSGMNRFN R YS FKNSL+VS+LSYCDYYRPR+FLLENVRNFV+FK SM
Sbjct: 1216 MLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPRYFLLENVRNFVSFKRSM 1275
Query: 358 VLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRT 417
VLK+T+RCL ++GYQCTFG LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR
Sbjct: 1276 VLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEPLPLFPEPLHVFAPRA 1335
Query: 418 SQLNVTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQR 477
QL+V + K +VS S P+RTITVRD MSDLPEI+NG E+ Y S FQR
Sbjct: 1336 CQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEIRNGASALEISYNGEPQSWFQR 1395
Query: 478 E 478
+
Sbjct: 1396 Q 1396
Score = 43 (20.2 bits), Expect = 1.1e-133, Sum P(2) = 1.1e-133
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 2 YYNCVSYEGEQYKLKSCVYVNPD 24
YY V + E ++ CV V PD
Sbjct: 743 YYKKVCIDSETLEVGDCVSVIPD 765
>UNIPROTKB|F1S3I5 [details] [associations]
symbol:DNMT1 "Cytosine-specific methyltransferase"
species:9823 "Sus scrofa" [GO:0071230 "cellular response to amino
acid stimulus" evidence=IEA] [GO:0051573 "negative regulation of
histone H3-K9 methylation" evidence=IEA] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0042127 "regulation of cell proliferation" evidence=IEA]
[GO:0016458 "gene silencing" evidence=IEA] [GO:0010628 "positive
regulation of gene expression" evidence=IEA] [GO:0010216
"maintenance of DNA methylation" evidence=IEA] [GO:0008327
"methyl-CpG binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0005657 "replication fork" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003886 "DNA (cytosine-5-)-methyltransferase
activity" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] InterPro:IPR001025 InterPro:IPR001525
InterPro:IPR002857 InterPro:IPR010506 InterPro:IPR017198
InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426 Pfam:PF02008
Pfam:PF06464 PIRSF:PIRSF037404 PRINTS:PR00105 PROSITE:PS00094
PROSITE:PS00095 PROSITE:PS51038 PROSITE:PS51058 SMART:SM00439
GO:GO:0005634 GO:GO:0045892 GO:GO:0008270 GO:GO:0003723
GO:GO:0042127 GO:GO:0010628 GO:GO:0005721 GO:GO:0071230
GO:GO:0016458 GO:GO:0005657 GO:GO:0051573 GO:GO:0051571
GO:GO:0003886 PANTHER:PTHR10629 GO:GO:0010216 InterPro:IPR022702
Pfam:PF12047 GeneTree:ENSGT00390000005100 OMA:SENWAME GO:GO:0008327
EMBL:CU462940 Ensembl:ENSSSCT00000014923 Uniprot:F1S3I5
Length = 1611
Score = 1286 (457.8 bits), Expect = 1.1e-133, Sum P(2) = 1.1e-133
Identities = 259/483 (53%), Positives = 326/483 (67%)
Query: 3 YNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQN-NKRPVEDEELYPEAYRKLSDYMK 61
Y+ + G QY++ VY+ P+ F F K S V+ K PV DE+LYPE YRK SDY+K
Sbjct: 919 YSSATKNGIQYRVGDGVYLPPEAFTFNIKLSSPVKRPRKEPV-DEDLYPEHYRKYSDYIK 977
Query: 62 GSNAYTPAPFGIGYIVAIF---KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDL 118
GSN P P+ IG I IF K GK N +D+ + + KFYRPENTH+S +Y D+
Sbjct: 978 GSNLDAPEPYRIGRIKEIFCTKKSNGKPN--ETDIKIRLNKFYRPENTHKSTPASYHADI 1035
Query: 119 NKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNL 178
N LYWSDEE V VQG+C V ++L +S+ GP RFYF EAYN+K++ F +
Sbjct: 1036 NLLYWSDEEAVVDFKSVQGRCTVEYGEDLPECLQDFSAGGPDRFYFLEAYNAKSKSFEDP 1095
Query: 179 PTEALFLXXXXXXXXXXXNQTNKPE-EKDEI-TEWPSIARP-LRCLEVFAGAGGLSRGLD 235
P A ++T E E+ TE I P LR L+VF+G GGLS G
Sbjct: 1096 PNHARSPGNKGKGKGKGKSRTKSQTCEPSELETE---IKLPKLRTLDVFSGCGGLSEGFH 1152
Query: 236 KSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGE 295
++G++ + WAIE AA AF++NNPG TVF +DCN +L+ V+ EV + + QKLP+KG+
Sbjct: 1153 QAGISETLWAIEMWDPAAQAFRLNNPGSTVFTEDCNVLLKLVMAGEVTNSRGQKLPQKGD 1212
Query: 296 VEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKN 355
VEMLCGGPPCQGFSGMNRFN R YS FKNSL+VS+LSYCDYYRPR+FLLENVRNFV+FK
Sbjct: 1213 VEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPRYFLLENVRNFVSFKR 1272
Query: 356 SMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSP 415
SMVLK+T+RCL ++GYQCTFG LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+P
Sbjct: 1273 SMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEQLPLFPEPLHVFAP 1332
Query: 416 RTSQLNVTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHF 475
R QL+V + K +VS S P+RTITVRD MSDLPEI+NG +E+ Y S F
Sbjct: 1333 RACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEIRNGASAQEISYNGEPQSWF 1392
Query: 476 QRE 478
QR+
Sbjct: 1393 QRQ 1395
Score = 45 (20.9 bits), Expect = 1.1e-133, Sum P(2) = 1.1e-133
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 1 LYYNCVSYEGEQYKLKSCVYVNPD 24
+YY V + E ++ CV V PD
Sbjct: 741 IYYKKVCIDSETLEVGDCVSVIPD 764
>RGD|620979 [details] [associations]
symbol:Dnmt1 "DNA (cytosine-5-)-methyltransferase 1"
species:10116 "Rattus norvegicus" [GO:0000792 "heterochromatin"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA;ISO]
[GO:0003690 "double-stranded DNA binding" evidence=IDA] [GO:0003723
"RNA binding" evidence=ISO] [GO:0003886 "DNA
(cytosine-5-)-methyltransferase activity" evidence=IEA;IGI;ISO;IDA]
[GO:0005634 "nucleus" evidence=IEA;ISO;IDA] [GO:0005657
"replication fork" evidence=ISO] [GO:0005721 "centromeric
heterochromatin" evidence=ISO] [GO:0006306 "DNA methylation"
evidence=ISO;TAS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA;ISO]
[GO:0008327 "methyl-CpG binding" evidence=ISO;IDA] [GO:0008757
"S-adenosylmethionine-dependent methyltransferase activity"
evidence=TAS] [GO:0009008 "DNA-methyltransferase activity"
evidence=ISO] [GO:0010216 "maintenance of DNA methylation"
evidence=ISO;IDA] [GO:0010424 "DNA methylation on cytosine within a
CG sequence" evidence=IDA] [GO:0010468 "regulation of gene
expression" evidence=ISO] [GO:0010628 "positive regulation of gene
expression" evidence=ISO] [GO:0016458 "gene silencing"
evidence=ISO] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IPI]
[GO:0042127 "regulation of cell proliferation" evidence=ISO]
[GO:0042826 "histone deacetylase binding" evidence=IPI] [GO:0043234
"protein complex" evidence=IDA] [GO:0045322 "unmethylated CpG
binding" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0046498
"S-adenosylhomocysteine metabolic process" evidence=IDA]
[GO:0046499 "S-adenosylmethioninamine metabolic process"
evidence=IDA] [GO:0046500 "S-adenosylmethionine metabolic process"
evidence=IDA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=ISO] [GO:0051573 "negative regulation of
histone H3-K9 methylation" evidence=ISO] [GO:0051718 "DNA
(cytosine-5-)-methyltransferase activity, acting on CpG substrates"
evidence=IDA] [GO:0071230 "cellular response to amino acid
stimulus" evidence=ISO] [GO:0090116 "C-5 methylation of cytosine"
evidence=ISO] InterPro:IPR001025 InterPro:IPR001525
InterPro:IPR002857 InterPro:IPR010506 InterPro:IPR017198
InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426 Pfam:PF02008
Pfam:PF06464 PIRSF:PIRSF037404 PRINTS:PR00105 PROSITE:PS00094
PROSITE:PS00095 PROSITE:PS51038 PROSITE:PS51058 SMART:SM00439
RGD:620979 GO:GO:0005634 GO:GO:0043234 GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 GO:GO:0016568 GO:GO:0003690
GO:GO:0046500 eggNOG:COG0270 PANTHER:PTHR10629 GO:GO:0046498
GO:GO:0010216 GO:GO:0045322 GO:GO:0010424 InterPro:IPR022702
Pfam:PF12047 GO:GO:0051718 GO:GO:0046499 HOGENOM:HOG000082497
HOVERGEN:HBG051384 GO:GO:0008327 EMBL:AB012214 EMBL:AF116344
EMBL:AF116345 EMBL:D64060 EMBL:AH007612 IPI:IPI00231930
IPI:IPI00231931 IPI:IPI00231933 IPI:IPI00231934 IPI:IPI00231935
IPI:IPI00231936 IPI:IPI00231937 IPI:IPI00231938 IPI:IPI00327802
PIR:JE0378 UniGene:Rn.6955 ProteinModelPortal:Q9Z330 IntAct:Q9Z330
STRING:Q9Z330 REBASE:3019 PhosphoSite:Q9Z330 PRIDE:Q9Z330
UCSC:RGD:620979 BioCyc:MetaCyc:MONOMER-8581 ArrayExpress:Q9Z330
Genevestigator:Q9Z330 Uniprot:Q9Z330
Length = 1622
Score = 1283 (456.7 bits), Expect = 4.7e-133, Sum P(2) = 4.7e-133
Identities = 253/475 (53%), Positives = 325/475 (68%)
Query: 1 LYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKR-PVEDEELYPEAYRKLSDY 59
+Y + ++ G Y+L VY+ P+ F F K S ++ +KR PV + + + YRK SDY
Sbjct: 925 VYCSSITKNGVVYRLGDSVYLPPEAFTFNIKMASPMKRSKRDPVNENPVPRDTYRKYSDY 984
Query: 60 MKGSNAYTPAPFGIGYIVAIF--KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLD 117
+KGSN P P+ IG I I+ KKKG K V+ +D+ + + KFYRPENTH+S++ TY D
Sbjct: 985 IKGSNLDAPEPYRIGRIKEIYCGKKKGGK-VNEADIKIRLYKFYRPENTHKSIQATYHAD 1043
Query: 118 LNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTN 177
+N LYWSDEE V SDVQG+C V ++L S +S GP RFYF EAYNSKT+ F +
Sbjct: 1044 INLLYWSDEEAVVDFSDVQGRCTVEYGEDLLESIQDYSQGGPDRFYFLEAYNSKTKSFED 1103
Query: 178 LPTEALFLXXXXXXXXXXXNQTNKPEEKDEITEWPSIARP-LRCLEVFAGAGGLSRGLDK 236
P A + KP+ + +I P LR L+VF+G GGL+ G +
Sbjct: 1104 PPNHARSPGNKGKGKGKGKGK-GKPQVSEPKEPEAAIKLPKLRTLDVFSGCGGLTEGFHQ 1162
Query: 237 SGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEV 296
+G++ + WAIE AA AF++NNPG TVF +DCN +L+ V+ EV + Q+LP+KG+V
Sbjct: 1163 AGISETLWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLLKLVMAGEVTNSLGQRLPQKGDV 1222
Query: 297 EMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNS 356
EMLCGGPPCQGFSGMNRFN R YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+F+ S
Sbjct: 1223 EMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFRRS 1282
Query: 357 MVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPR 416
MVLK+T+RCL ++GYQCTFG LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR
Sbjct: 1283 MVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPR 1342
Query: 417 TSQLNVTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENA 471
QL+V + K +VS S P+RTIT+RD MSDLPEIQNG E+ YK A
Sbjct: 1343 ACQLSVVVDDKKFVSNITRLSSGPFRTITMRDTMSDLPEIQNGASAPEISYKWRA 1397
Score = 42 (19.8 bits), Expect = 4.7e-133, Sum P(2) = 4.7e-133
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 2 YYNCVSYEGEQYKLKSCVYVNPD 24
YY VS + E ++ CV V PD
Sbjct: 750 YYWKVSIDEETLEVGDCVSVIPD 772
>UNIPROTKB|Q9Z330 [details] [associations]
symbol:Dnmt1 "DNA (cytosine-5)-methyltransferase 1"
species:10116 "Rattus norvegicus" [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001025 InterPro:IPR001525 InterPro:IPR002857
InterPro:IPR010506 InterPro:IPR017198 InterPro:IPR018117
Pfam:PF00145 Pfam:PF01426 Pfam:PF02008 Pfam:PF06464
PIRSF:PIRSF037404 PRINTS:PR00105 PROSITE:PS00094 PROSITE:PS00095
PROSITE:PS51038 PROSITE:PS51058 SMART:SM00439 RGD:620979
GO:GO:0005634 GO:GO:0043234 GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 GO:GO:0016568 GO:GO:0003690
GO:GO:0046500 eggNOG:COG0270 PANTHER:PTHR10629 GO:GO:0046498
GO:GO:0010216 GO:GO:0045322 GO:GO:0010424 InterPro:IPR022702
Pfam:PF12047 GO:GO:0051718 GO:GO:0046499 HOGENOM:HOG000082497
HOVERGEN:HBG051384 GO:GO:0008327 EMBL:AB012214 EMBL:AF116344
EMBL:AF116345 EMBL:D64060 EMBL:AH007612 IPI:IPI00231930
IPI:IPI00231931 IPI:IPI00231933 IPI:IPI00231934 IPI:IPI00231935
IPI:IPI00231936 IPI:IPI00231937 IPI:IPI00231938 IPI:IPI00327802
PIR:JE0378 UniGene:Rn.6955 ProteinModelPortal:Q9Z330 IntAct:Q9Z330
STRING:Q9Z330 REBASE:3019 PhosphoSite:Q9Z330 PRIDE:Q9Z330
UCSC:RGD:620979 BioCyc:MetaCyc:MONOMER-8581 ArrayExpress:Q9Z330
Genevestigator:Q9Z330 Uniprot:Q9Z330
Length = 1622
Score = 1283 (456.7 bits), Expect = 4.7e-133, Sum P(2) = 4.7e-133
Identities = 253/475 (53%), Positives = 325/475 (68%)
Query: 1 LYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKR-PVEDEELYPEAYRKLSDY 59
+Y + ++ G Y+L VY+ P+ F F K S ++ +KR PV + + + YRK SDY
Sbjct: 925 VYCSSITKNGVVYRLGDSVYLPPEAFTFNIKMASPMKRSKRDPVNENPVPRDTYRKYSDY 984
Query: 60 MKGSNAYTPAPFGIGYIVAIF--KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLD 117
+KGSN P P+ IG I I+ KKKG K V+ +D+ + + KFYRPENTH+S++ TY D
Sbjct: 985 IKGSNLDAPEPYRIGRIKEIYCGKKKGGK-VNEADIKIRLYKFYRPENTHKSIQATYHAD 1043
Query: 118 LNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTN 177
+N LYWSDEE V SDVQG+C V ++L S +S GP RFYF EAYNSKT+ F +
Sbjct: 1044 INLLYWSDEEAVVDFSDVQGRCTVEYGEDLLESIQDYSQGGPDRFYFLEAYNSKTKSFED 1103
Query: 178 LPTEALFLXXXXXXXXXXXNQTNKPEEKDEITEWPSIARP-LRCLEVFAGAGGLSRGLDK 236
P A + KP+ + +I P LR L+VF+G GGL+ G +
Sbjct: 1104 PPNHARSPGNKGKGKGKGKGK-GKPQVSEPKEPEAAIKLPKLRTLDVFSGCGGLTEGFHQ 1162
Query: 237 SGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEV 296
+G++ + WAIE AA AF++NNPG TVF +DCN +L+ V+ EV + Q+LP+KG+V
Sbjct: 1163 AGISETLWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLLKLVMAGEVTNSLGQRLPQKGDV 1222
Query: 297 EMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNS 356
EMLCGGPPCQGFSGMNRFN R YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+F+ S
Sbjct: 1223 EMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFRRS 1282
Query: 357 MVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPR 416
MVLK+T+RCL ++GYQCTFG LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR
Sbjct: 1283 MVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPR 1342
Query: 417 TSQLNVTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENA 471
QL+V + K +VS S P+RTIT+RD MSDLPEIQNG E+ YK A
Sbjct: 1343 ACQLSVVVDDKKFVSNITRLSSGPFRTITMRDTMSDLPEIQNGASAPEISYKWRA 1397
Score = 42 (19.8 bits), Expect = 4.7e-133, Sum P(2) = 4.7e-133
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 2 YYNCVSYEGEQYKLKSCVYVNPD 24
YY VS + E ++ CV V PD
Sbjct: 750 YYWKVSIDEETLEVGDCVSVIPD 772
>UNIPROTKB|E2RHC6 [details] [associations]
symbol:DNMT1 "Cytosine-specific methyltransferase"
species:9615 "Canis lupus familiaris" [GO:0003886 "DNA
(cytosine-5-)-methyltransferase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001025
InterPro:IPR001525 InterPro:IPR002857 InterPro:IPR010506
InterPro:IPR017198 InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426
Pfam:PF02008 Pfam:PF06464 PIRSF:PIRSF037404 PRINTS:PR00105
PROSITE:PS00094 PROSITE:PS00095 PROSITE:PS51038 PROSITE:PS51058
SMART:SM00439 GO:GO:0005634 GO:GO:0003677 GO:GO:0008270
GO:GO:0003886 PANTHER:PTHR10629 InterPro:IPR022702 Pfam:PF12047
GeneTree:ENSGT00390000005100 EMBL:AAEX03012427 EMBL:AAEX03012426
Ensembl:ENSCAFT00000028398 Uniprot:E2RHC6
Length = 1613
Score = 1270 (452.1 bits), Expect = 8.7e-132, Sum P(2) = 8.7e-132
Identities = 253/482 (52%), Positives = 321/482 (66%)
Query: 3 YNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQN-NKRPVEDEELYPEAYRKLSDYMK 61
Y+ + G QY++ VY+ P+ F F K S V+ K PV DE+LYPE YRK SDY+K
Sbjct: 922 YSSATKNGIQYRVGDGVYLLPEAFTFNIKLSSPVKRPRKEPV-DEDLYPEHYRKYSDYIK 980
Query: 62 GSNAYTPAPFGIGYIVAIF-KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNK 120
GSN P P+ IG I IF KK + +D+ + + KFYRPENTH+S +Y D+N
Sbjct: 981 GSNLDAPEPYRIGRIKEIFCTKKSNGRPNETDIKIRINKFYRPENTHKSTPASYHADINL 1040
Query: 121 LYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPT 180
LYWSDEE V VQG+C V ++L +S+ GP RFYF EAYN+K + F + P
Sbjct: 1041 LYWSDEEVVVDFKAVQGRCTVEYGEDLPGCLQDFSAGGPDRFYFLEAYNAKNKSFEDPPN 1100
Query: 181 EALFLXXXXXXXXX----XXNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDK 236
A +QT +P E + + P LR L+VF+G GGLS G +
Sbjct: 1101 HARSPGNKGKGKGKGKGKAKSQTCEPSEPETEIKLPK----LRTLDVFSGCGGLSEGFHQ 1156
Query: 237 SGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEV 296
+G++ + WAIE AA AF++NNPG TVF +DCN +L+ V+ E + + QKLP+KG+V
Sbjct: 1157 AGISETLWAIEMWDPAAQAFRLNNPGSTVFTEDCNVLLKLVMAGEATNSRGQKLPQKGDV 1216
Query: 297 EMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNS 356
EMLCGGPPCQGFSGMNRFN R YS FKNSL+VS+LSYCDYYRPR+FLLENVRNFV+FK S
Sbjct: 1217 EMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPRYFLLENVRNFVSFKRS 1276
Query: 357 MVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPR 416
MVLK+T+RCL ++GYQCTFG LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR
Sbjct: 1277 MVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPR 1336
Query: 417 TSQLNVTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQ 476
QL+V + K +VS S P+RTITVRD MSDLPE++NG E+ Y S FQ
Sbjct: 1337 ACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEVRNGASALEILYNGEPQSWFQ 1396
Query: 477 RE 478
R+
Sbjct: 1397 RQ 1398
Score = 43 (20.2 bits), Expect = 8.7e-132, Sum P(2) = 8.7e-132
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 2 YYNCVSYEGEQYKLKSCVYVNPD 24
YY V + E ++ CV V PD
Sbjct: 743 YYKKVCIDSETLEVGDCVSVIPD 765
>UNIPROTKB|F5GX68 [details] [associations]
symbol:DNMT1 "Cytosine-specific methyltransferase"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008134 "transcription
factor binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003886 "DNA (cytosine-5-)-methyltransferase
activity" evidence=IEA] InterPro:IPR001025 InterPro:IPR001525
InterPro:IPR002857 InterPro:IPR010506 InterPro:IPR017198
InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426 Pfam:PF02008
Pfam:PF06464 PIRSF:PIRSF037404 PRINTS:PR00105 PROSITE:PS00094
PROSITE:PS00095 PROSITE:PS51038 PROSITE:PS51058 SMART:SM00439
GO:GO:0005634 GO:GO:0003677 GO:GO:0008270 EMBL:AC020931
GO:GO:0003886 PANTHER:PTHR10629 InterPro:IPR022702 Pfam:PF12047
EMBL:AC010077 EMBL:AC011511 HGNC:HGNC:2976 ChiTaRS:DNMT1
IPI:IPI01011182 ProteinModelPortal:F5GX68 SMR:F5GX68 PRIDE:F5GX68
Ensembl:ENST00000540357 UCSC:uc010xld.2 ArrayExpress:F5GX68
Bgee:F5GX68 Uniprot:F5GX68
Length = 1619
Score = 1266 (450.7 bits), Expect = 2.3e-131, Sum P(2) = 2.3e-131
Identities = 257/484 (53%), Positives = 323/484 (66%)
Query: 1 LYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQN-NKRPVEDEELYPEAYRKLSDY 59
LYY+ G Y++ VY+ P+ F F K S V+ K PV DE+LYPE YRK SDY
Sbjct: 922 LYYSATK-NGILYRVGDGVYLPPEAFTFNIKLSSPVKRPRKEPV-DEDLYPEHYRKYSDY 979
Query: 60 MKGSNAYTPAPFGIGYIVAIF-KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDL 118
+KGSN P P+ IG I IF KK + +D+ + V KFYRPENTH+S +Y D+
Sbjct: 980 IKGSNLDAPEPYRIGRIKEIFCPKKSNGRPNETDIKIRVNKFYRPENTHKSTPASYHADI 1039
Query: 119 NKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNL 178
N LYWSDEE V VQG+C V ++L +S GP+RFYF EAYN+K++ F +
Sbjct: 1040 NLLYWSDEEAVVDFKAVQGRCTVEYGEDLPECVQVYSMGGPNRFYFLEAYNAKSKSFEDP 1099
Query: 179 PTEALFLXXXXXXXXXXXNQTNKPEEKD-EITEWPSIA--RP-LRCLEVFAGAGGLSRGL 234
P A KP+ + E +E P I P LR L+VF+G GGLS G
Sbjct: 1100 PNHA---RSPGNKGKGKGKGKGKPKSQACEPSE-PEIEIKLPKLRTLDVFSGCGGLSEGF 1155
Query: 235 DKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKG 294
++G++ + WAIE AA AF++NNPG TVF +DCN +L+ V+ E + + Q+LP+KG
Sbjct: 1156 HQAGISDTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILLKLVMAGETTNSRGQRLPQKG 1215
Query: 295 EVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFK 354
+VEMLCGGPPCQGFSGMNRFN R YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK
Sbjct: 1216 DVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFK 1275
Query: 355 NSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFS 414
SMVLK+T+RCL ++GYQCTFG LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+
Sbjct: 1276 RSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFA 1335
Query: 415 PRTSQLNVTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSH 474
PR QL+V + K +VS S P+RTITVRD MSDLPE++NG E+ Y S
Sbjct: 1336 PRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEVRNGASALEISYNGEPQSW 1395
Query: 475 FQRE 478
FQR+
Sbjct: 1396 FQRQ 1399
Score = 43 (20.2 bits), Expect = 2.3e-131, Sum P(2) = 2.3e-131
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 2 YYNCVSYEGEQYKLKSCVYVNPD 24
YY V + E ++ CV V PD
Sbjct: 746 YYKKVCIDAETLEVGDCVSVIPD 768
>UNIPROTKB|P26358 [details] [associations]
symbol:DNMT1 "DNA (cytosine-5)-methyltransferase 1"
species:9606 "Homo sapiens" [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005657 "replication
fork" evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008327 "methyl-CpG binding" evidence=IEA] [GO:0016458 "gene
silencing" evidence=IEA] [GO:0042127 "regulation of cell
proliferation" evidence=IEA] [GO:0071230 "cellular response to
amino acid stimulus" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010628 "positive regulation of gene expression" evidence=IMP]
[GO:0051573 "negative regulation of histone H3-K9 methylation"
evidence=IMP] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IMP] [GO:0010216 "maintenance of DNA
methylation" evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0009008 "DNA-methyltransferase activity" evidence=IDA]
[GO:0003886 "DNA (cytosine-5-)-methyltransferase activity"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0006306 "DNA
methylation" evidence=TAS] InterPro:IPR001025 InterPro:IPR001525
InterPro:IPR002857 InterPro:IPR010506 InterPro:IPR017198
InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426 Pfam:PF02008
Pfam:PF06464 PIRSF:PIRSF037404 PRINTS:PR00105 PROSITE:PS00094
PROSITE:PS00095 PROSITE:PS51038 PROSITE:PS51058 SMART:SM00439
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 GO:GO:0003723 GO:GO:0042127
GO:GO:0000122 GO:GO:0010628 GO:GO:0005721 GO:GO:0071230
GO:GO:0016458 Orphanet:36386 GO:GO:0005657 GO:GO:0051573
GO:GO:0051571 EMBL:AC020931 DrugBank:DB00928 DrugBank:DB01035
eggNOG:COG0270 KO:K00558 GO:GO:0003886 PANTHER:PTHR10629
DrugBank:DB01181 GO:GO:0010216 DrugBank:DB01262 InterPro:IPR022702
Pfam:PF12047 BRENDA:2.1.1.37 CTD:1786 HOGENOM:HOG000082497
HOVERGEN:HBG051384 OMA:SENWAME OrthoDB:EOG4T1HKN GO:GO:0008327
EMBL:X63692 EMBL:AF180682 EMBL:AC010077 EMBL:AC011511 EMBL:BC126227
EMBL:BC144093 EMBL:AH008119 IPI:IPI00031519 IPI:IPI00220918
IPI:IPI00220919 PIR:S22610 RefSeq:NP_001124295.1 RefSeq:NP_001370.1
UniGene:Hs.202672 PDB:3EPZ PDB:3PTA PDB:3SWR PDBsum:3EPZ
PDBsum:3PTA PDBsum:3SWR ProteinModelPortal:P26358 SMR:P26358
DIP:DIP-39693N IntAct:P26358 MINT:MINT-232346 STRING:P26358
REBASE:1161 PhosphoSite:P26358 DMDM:12231019 PaxDb:P26358
PRIDE:P26358 Ensembl:ENST00000340748 Ensembl:ENST00000359526
GeneID:1786 KEGG:hsa:1786 UCSC:uc002mng.3 UCSC:uc002mnh.3
GeneCards:GC19M010244 HGNC:HGNC:2976 HPA:CAB005876 HPA:HPA002694
MIM:126375 MIM:614116 neXtProt:NX_P26358 PharmGKB:PA27443
BindingDB:P26358 ChEMBL:CHEMBL1993 ChiTaRS:DNMT1 DrugBank:DB01099
EvolutionaryTrace:P26358 GenomeRNAi:1786 NextBio:7267
ArrayExpress:P26358 Bgee:P26358 CleanEx:HS_DNMT1
Genevestigator:P26358 GermOnline:ENSG00000130816 Uniprot:P26358
Length = 1616
Score = 1266 (450.7 bits), Expect = 2.3e-131, Sum P(2) = 2.3e-131
Identities = 257/484 (53%), Positives = 323/484 (66%)
Query: 1 LYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQN-NKRPVEDEELYPEAYRKLSDY 59
LYY+ G Y++ VY+ P+ F F K S V+ K PV DE+LYPE YRK SDY
Sbjct: 922 LYYSATK-NGILYRVGDGVYLPPEAFTFNIKLSSPVKRPRKEPV-DEDLYPEHYRKYSDY 979
Query: 60 MKGSNAYTPAPFGIGYIVAIF-KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDL 118
+KGSN P P+ IG I IF KK + +D+ + V KFYRPENTH+S +Y D+
Sbjct: 980 IKGSNLDAPEPYRIGRIKEIFCPKKSNGRPNETDIKIRVNKFYRPENTHKSTPASYHADI 1039
Query: 119 NKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNL 178
N LYWSDEE V VQG+C V ++L +S GP+RFYF EAYN+K++ F +
Sbjct: 1040 NLLYWSDEEAVVDFKAVQGRCTVEYGEDLPECVQVYSMGGPNRFYFLEAYNAKSKSFEDP 1099
Query: 179 PTEALFLXXXXXXXXXXXNQTNKPEEKD-EITEWPSIA--RP-LRCLEVFAGAGGLSRGL 234
P A KP+ + E +E P I P LR L+VF+G GGLS G
Sbjct: 1100 PNHA---RSPGNKGKGKGKGKGKPKSQACEPSE-PEIEIKLPKLRTLDVFSGCGGLSEGF 1155
Query: 235 DKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKG 294
++G++ + WAIE AA AF++NNPG TVF +DCN +L+ V+ E + + Q+LP+KG
Sbjct: 1156 HQAGISDTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILLKLVMAGETTNSRGQRLPQKG 1215
Query: 295 EVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFK 354
+VEMLCGGPPCQGFSGMNRFN R YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK
Sbjct: 1216 DVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFK 1275
Query: 355 NSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFS 414
SMVLK+T+RCL ++GYQCTFG LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+
Sbjct: 1276 RSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFA 1335
Query: 415 PRTSQLNVTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSH 474
PR QL+V + K +VS S P+RTITVRD MSDLPE++NG E+ Y S
Sbjct: 1336 PRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEVRNGASALEISYNGEPQSW 1395
Query: 475 FQRE 478
FQR+
Sbjct: 1396 FQRQ 1399
Score = 43 (20.2 bits), Expect = 2.3e-131, Sum P(2) = 2.3e-131
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 2 YYNCVSYEGEQYKLKSCVYVNPD 24
YY V + E ++ CV V PD
Sbjct: 746 YYKKVCIDAETLEVGDCVSVIPD 768
>UNIPROTKB|D4A8Z6 [details] [associations]
symbol:Dnmt1 "Cytosine-specific methyltransferase"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003886 "DNA (cytosine-5-)-methyltransferase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001025
InterPro:IPR001525 InterPro:IPR002857 InterPro:IPR010506
InterPro:IPR017198 InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426
Pfam:PF02008 Pfam:PF06464 PIRSF:PIRSF037404 PRINTS:PR00105
PROSITE:PS00094 PROSITE:PS00095 PROSITE:PS51038 PROSITE:PS51058
SMART:SM00439 GO:GO:0005634 GO:GO:0003677 GO:GO:0008270
GO:GO:0003886 PANTHER:PTHR10629 InterPro:IPR022702 Pfam:PF12047
IPI:IPI00327802 ProteinModelPortal:D4A8Z6
Ensembl:ENSRNOT00000061192 ArrayExpress:D4A8Z6 Uniprot:D4A8Z6
Length = 1616
Score = 939 (335.6 bits), Expect = 1.0e-94, Sum P(2) = 1.0e-94
Identities = 206/481 (42%), Positives = 281/481 (58%)
Query: 1 LYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYM 60
+Y + ++ G Y+L VY+ P+ F F K S ++ +KR +E LYPE YRK SDY+
Sbjct: 921 VYCSSITKNGVVYRLGDSVYLPPEAFTFNIKMASPMKRSKRDPVNENLYPEHYRKYSDYI 980
Query: 61 KGSNAYTPAPFGIGYIVAIF--KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDL 118
KGSN P P+ IG I I KKKG K V+ +D+ + + KFYRP T ++ Q +
Sbjct: 981 KGSNLDAPEPYRIGRIKEIHCGKKKGGK-VNEADIKIRLYKFYRPAGTGVLQTWSSQAFI 1039
Query: 119 NKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNL 178
+W +E ++ + V + S + GP +F+F EAYNSKT+ F +
Sbjct: 1040 VVGHWGTDECVLTYVASPSQTTVPFSAPILESIPA-VALGPSKFFFLEAYNSKTKSFEDP 1098
Query: 179 PTEALFLXXXXXXXXXXXNQTNKPEEKDEITEWPSIARP-LRCLEVFAGAGGLSRGLDKS 237
P A + KP+ + +I P LR L+VF+G GGL+ G ++
Sbjct: 1099 PNHARSPGNKGKGKGKGKGK-GKPQVSEPKEPEAAIKLPKLRTLDVFSGCGGLTEGFHQA 1157
Query: 238 GVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVE 297
G++ + WAIE AA AF++NNPG TVF +DCN +L+ V+ EV + Q+LP+KG+VE
Sbjct: 1158 GISETLWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLLKLVMAGEVTNSLGQRLPQKGDVE 1217
Query: 298 MLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSM 357
MLCGGPPCQGFSGMNRFN R YS FKNSL+VS+LS D ++ ++ ++ M
Sbjct: 1218 MLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSLRDREESEDIVMGSIPRESGWQGPM 1277
Query: 358 VLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRT 417
M MRC + + LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR
Sbjct: 1278 QTSMHMRCCFPVWLSVSLPLLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRA 1337
Query: 418 SQLNVTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQR 477
QL+V + K +VS S P+RTITVRD MSDLPEIQNG E+ Y S FQR
Sbjct: 1338 CQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEIQNGASAPEISYNGEPQSWFQR 1397
Query: 478 E 478
+
Sbjct: 1398 Q 1398
Score = 42 (19.8 bits), Expect = 1.0e-94, Sum P(2) = 1.0e-94
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 2 YYNCVSYEGEQYKLKSCVYVNPD 24
YY VS + E ++ CV V PD
Sbjct: 746 YYWKVSIDEETLEVGDCVSVIPD 768
>TAIR|locus:2155959 [details] [associations]
symbol:MET1 "methyltransferase 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006306 "DNA methylation" evidence=IEA;RCA] [GO:0090116 "C-5
methylation of cytosine" evidence=IEA] [GO:0010069 "zygote
asymmetric cytokinesis in embryo sac" evidence=IMP] [GO:0006349
"regulation of gene expression by genetic imprinting" evidence=IMP]
[GO:0010216 "maintenance of DNA methylation" evidence=IMP]
[GO:0010424 "DNA methylation on cytosine within a CG sequence"
evidence=IMP] [GO:0009294 "DNA mediated transformation"
evidence=IMP] [GO:0006260 "DNA replication" evidence=RCA]
[GO:0006261 "DNA-dependent DNA replication" evidence=RCA]
[GO:0006333 "chromatin assembly or disassembly" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0008283 "cell
proliferation" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0016458 "gene silencing"
evidence=RCA] [GO:0034968 "histone lysine methylation"
evidence=RCA] [GO:0051567 "histone H3-K9 methylation" evidence=RCA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0008168
"methyltransferase activity" evidence=TAS] [GO:0009910 "negative
regulation of flower development" evidence=IMP] InterPro:IPR001025
InterPro:IPR001525 InterPro:IPR017198 InterPro:IPR018117
Pfam:PF00145 Pfam:PF01426 PIRSF:PIRSF037404 PRINTS:PR00105
PROSITE:PS00094 PROSITE:PS00095 PROSITE:PS51038 SMART:SM00439
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0016568 GO:GO:0009910 GO:GO:0008168 GO:GO:0006349
EMBL:AB016872 GO:GO:0009294 eggNOG:COG0270 KO:K00558 GO:GO:0003886
PANTHER:PTHR10629 TIGRFAMs:TIGR00675 GO:GO:0010069 GO:GO:0010216
GO:GO:0010424 InterPro:IPR022702 Pfam:PF12047 EMBL:L10692
EMBL:AY699012 EMBL:AK229013 EMBL:AK230148 IPI:IPI00536256
PIR:S59604 RefSeq:NP_199727.1 UniGene:At.20294
ProteinModelPortal:P34881 SMR:P34881 STRING:P34881 REBASE:11752
PaxDb:P34881 PRIDE:P34881 EnsemblPlants:AT5G49160.1 GeneID:834975
KEGG:ath:AT5G49160 TAIR:At5g49160 HOGENOM:HOG000083447
InParanoid:P34881 OMA:IWISTEL PhylomeDB:P34881
ProtClustDB:CLSN2685944 Genevestigator:P34881 GermOnline:AT5G49160
Uniprot:P34881
Length = 1534
Score = 506 (183.2 bits), Expect = 2.5e-72, Sum P(3) = 2.5e-72
Identities = 97/213 (45%), Positives = 143/213 (67%)
Query: 268 DDCNKILQ-RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSL 326
DDC + + ++ +++K LP G+V+ + GGPPCQGFSGMNRFNQ +S + +
Sbjct: 1160 DDCVSTTEANELAAKLTEEQKSTLPLPGQVDFINGGPPCQGFSGMNRFNQSSWSKVQCEM 1219
Query: 327 IVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVS 386
I+++LS+ DY+RPR+FLLENVR FV+F ++T+ L ++GYQ FG L+AG +GVS
Sbjct: 1220 ILAFLSFADYFRPRYFLLENVRTFVSFNKGQTFQLTLASLLEMGYQVRFGILEAGAYGVS 1279
Query: 387 QTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQ-SAPYRTIT 445
Q+R+RA + AAAP EVLP++PEP VF +L +++S+ + + + T AP+R IT
Sbjct: 1280 QSRKRAFIWAAAPEEVLPEWPEPMHVFG--VPKLKISLSQGLHYAAVRSTALGAPFRPIT 1337
Query: 446 VRDVMSDLPEIQNGCKMEELPYKENALSHFQRE 478
VRD + DLP ++NG YKE A+S FQ+E
Sbjct: 1338 VRDTIGDLPSVENGDSRTNKEYKEVAVSWFQKE 1370
Score = 250 (93.1 bits), Expect = 2.5e-72, Sum P(3) = 2.5e-72
Identities = 71/230 (30%), Positives = 117/230 (50%)
Query: 57 SDYMKGSNAYTPAPFGIGYIVAIFKKKGKK-NVSASDVFLTVKKFYRPENTHRSVEFTYQ 115
+ + G N A + + ++ I K+ +K ++ + DV V++FYRPE+ S E Y
Sbjct: 933 TSFKSGRNIGLRA-YVVCQLLEIVPKESRKADLGSFDV--KVRRFYRPEDV--SAEKAYA 987
Query: 116 LDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEF 175
D+ +LY+S + + ++GKC V + ++ +S + S H F+ + +++
Sbjct: 988 SDIQELYFSQDTVVLPPGALEGKCEVRKKSDMPLSREYPIS--DHIFFCDLFFDTSKGSL 1045
Query: 176 TNLPTEALFLXXXXXXXXXXXNQTNKPEEKD---EIT---EWPSIARPLRCLEVFAGAGG 229
LP + K E + EI E P R L L++FAG GG
Sbjct: 1046 KQLPANMKPKFSTIKDDTLLRKKKGKGVESEIESEIVKPVEPPKEIR-LATLDIFAGCGG 1104
Query: 230 LSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVID 279
LS GL K+GV+ + WAIE++ A AFK N+P TVFVD+CN IL+ +++
Sbjct: 1105 LSHGLKKAGVSDAKWAIEYEEPAGQAFKQNHPESTVFVDNCNVILRAIME 1154
Score = 46 (21.3 bits), Expect = 2.5e-72, Sum P(3) = 2.5e-72
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 10 GEQYKLKSCVYVNPD 24
G +Y ++ VYVNPD
Sbjct: 908 GIEYSVEDFVYVNPD 922
>UNIPROTKB|Q7Y1I7 [details] [associations]
symbol:MET1A "DNA (cytosine-5)-methyltransferase 1A"
species:39947 "Oryza sativa Japonica Group" [GO:0010216
"maintenance of DNA methylation" evidence=ISS] [GO:0010424 "DNA
methylation on cytosine within a CG sequence" evidence=ISS]
[GO:0016458 "gene silencing" evidence=IMP] InterPro:IPR001025
InterPro:IPR001525 InterPro:IPR017198 InterPro:IPR018117
Pfam:PF00145 Pfam:PF01426 PIRSF:PIRSF037404 PRINTS:PR00105
PROSITE:PS00094 PROSITE:PS00095 PROSITE:PS51038 SMART:SM00439
GO:GO:0005634 GO:GO:0003677 GO:GO:0016458 EMBL:CM000140
eggNOG:COG0270 GO:GO:0003886 PANTHER:PTHR10629 TIGRFAMs:TIGR00675
GO:GO:0010216 EMBL:AF462029 EMBL:AB362510 EMBL:AC093713
EMBL:AK108034 ProteinModelPortal:Q7Y1I7 STRING:Q7Y1I7 REBASE:7658
Gramene:Q7Y1I7 GO:GO:0010424 InterPro:IPR022702 Pfam:PF12047
Uniprot:Q7Y1I7
Length = 1527
Score = 509 (184.2 bits), Expect = 8.5e-70, Sum P(2) = 8.5e-70
Identities = 98/215 (45%), Positives = 146/215 (67%)
Query: 268 DDC---NKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKN 324
DDC ++ +R ++ +DK + LP GEVE + GGPPCQGFSGMNRFNQ +S +
Sbjct: 1159 DDCISTSEAAERAA--KLSEDKIKNLPVPGEVEFINGGPPCQGFSGMNRFNQSPWSKVQC 1216
Query: 325 SLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFG 384
+I+++LS+ +Y+RPRFFLLENVRNFV+F ++T+ L ++GYQ FG L+AG +G
Sbjct: 1217 EMILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAYG 1276
Query: 385 VSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQS-APYRT 443
V+Q+R+RA + AAAPGE LP++PEP VF+ + +L +T+ + + K T + AP+R+
Sbjct: 1277 VAQSRKRAFIWAAAPGETLPEWPEPMHVFA--SPELKITLPDGKFYAAVKSTAAGAPFRS 1334
Query: 444 ITVRDVMSDLPEIQNGCKMEELPYKENALSHFQRE 478
ITVRD + DLP ++NG + Y +S FQ++
Sbjct: 1335 ITVRDTIGDLPAVENGAGKPTIQYGSGPVSWFQKK 1369
Score = 243 (90.6 bits), Expect = 8.5e-70, Sum P(2) = 8.5e-70
Identities = 73/270 (27%), Positives = 127/270 (47%)
Query: 26 FKFKSKPQSAVQNNKRPVEDEELY--PEAYRK---LSDYMKGSNAYTPAPFGIGYIVAIF 80
FK S+ +N + D LY PE + + Y G N P+ + +++++
Sbjct: 897 FKLLSESSFVFENITYNIHDF-LYIRPEFFSQGEGHETYKAGRNVGLK-PYAVCHLLSVH 954
Query: 81 KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCF 140
G + + + V++FYRP++ S Y D+ ++Y+S++ V + ++GKC
Sbjct: 955 GPAGSRKANPESTKVKVRRFYRPDDI--SSTKAYSSDIREVYYSEDIISVPVVMIEGKCE 1012
Query: 141 VVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLXXXXXXXXXXXNQTN 200
V +D+L ++D + H F Y+ LP + N+
Sbjct: 1013 VRLKDDLP-NSDL-PAVVEHVFCCEYLYDPANGALKQLPPNVRLVTLTRKVPASKKNK-G 1069
Query: 201 KPEEKDEI--TEWPSIARPLRCL---EVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATA 255
K E+ ++ P + CL ++FAG GGLS GL +SG++ + WAIE++ A A
Sbjct: 1070 KQICDIELGGSDKPKDGQSENCLATLDIFAGCGGLSEGLQRSGLSLTKWAIEYEEPAGDA 1129
Query: 256 FKMNNPGCTVFVDDCNKILQRVIDNEVCDD 285
F N+P VFV++CN IL+ ++D C D
Sbjct: 1130 FGENHPEAAVFVENCNVILKAIMDK--CGD 1157
>TAIR|locus:2122313 [details] [associations]
symbol:AT4G08990 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003886 "DNA
(cytosine-5-)-methyltransferase activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006306 "DNA
methylation" evidence=IEA;ISS] [GO:0090116 "C-5 methylation of
cytosine" evidence=IEA] InterPro:IPR001025 InterPro:IPR001525
InterPro:IPR017198 InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426
PIRSF:PIRSF037404 PRINTS:PR00105 PROSITE:PS00094 PROSITE:PS00095
PROSITE:PS51038 SMART:SM00439 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 EMBL:AL161513
eggNOG:COG0270 KO:K00558 GO:GO:0003886 PANTHER:PTHR10629
TIGRFAMs:TIGR00675 InterPro:IPR022702 Pfam:PF12047
HOGENOM:HOG000083447 ProtClustDB:CLSN2685944 IPI:IPI00549079
PIR:G85090 RefSeq:NP_192638.1 UniGene:At.54221 HSSP:P20589
ProteinModelPortal:Q9M0S8 SMR:Q9M0S8 STRING:Q9M0S8 REBASE:2839
PaxDb:Q9M0S8 PRIDE:Q9M0S8 EnsemblPlants:AT4G08990.1 GeneID:826477
KEGG:ath:AT4G08990 TAIR:At4g08990 InParanoid:Q9M0S8 OMA:YRISMER
PhylomeDB:Q9M0S8 ArrayExpress:Q9M0S8 Genevestigator:Q9M0S8
Uniprot:Q9M0S8
Length = 1512
Score = 463 (168.0 bits), Expect = 4.1e-65, Sum P(2) = 4.1e-65
Identities = 89/214 (41%), Positives = 140/214 (65%)
Query: 267 VDDCNKILQRV-IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNS 325
VDDC ++ + ++ +++K LP G+ + + GGPPCQGFSGMNRF+ +S +
Sbjct: 1137 VDDCVSTVEAAELVAKLDENQKSTLPLPGQADFISGGPPCQGFSGMNRFSDGSWSKVQCE 1196
Query: 326 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 385
+I+++LS+ DY+RP++FLLENV+ FV + ++TM L +IGYQ FG L+AG +GV
Sbjct: 1197 MILAFLSFADYFRPKYFLLENVKKFVTYNKGRTFQLTMASLLEIGYQVRFGILEAGTYGV 1256
Query: 386 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQ-SAPYRTI 444
SQ R+R I+ AA+P EVLP++PEP VF S+ +++ + + T + T+ AP+R+I
Sbjct: 1257 SQPRKRVIIWAASPEEVLPEWPEPMHVFDNPGSK--ISLPRGLHYDTVRNTKFGAPFRSI 1314
Query: 445 TVRDVMSDLPEIQNGCKMEELPYKENALSHFQRE 478
TVRD + DLP ++NG Y+ +S FQ++
Sbjct: 1315 TVRDTIGDLPLVENGESKINKEYRTTPVSWFQKK 1348
Score = 245 (91.3 bits), Expect = 4.1e-65, Sum P(2) = 4.1e-65
Identities = 69/215 (32%), Positives = 107/215 (49%)
Query: 77 VAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQ 136
V + ++ K + ++ V LT +FYRPE+ S E Y D+ +LY+S + + +Q
Sbjct: 930 VIVLEESRKASNASFQVKLT--RFYRPEDI--SEEKAYASDIQELYYSHDTYILPPEALQ 985
Query: 137 GKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLXXXXXXXXXXX 196
GKC V ++++ + R H F+ Y+S T P
Sbjct: 986 GKCEVRKKNDMPLC--REYPILDHIFFCEVFYDSSTGYLKQFPANMKLKFSTIKDETLLR 1043
Query: 197 NQTNKPEE---KDEITEWPS-IARPLRC--LEVFAGAGGLSRGLDKSGVARSTWAIEFDS 250
+ K E I P + + +R L++FAG GGLS GL+K+GV+ + WAIE++
Sbjct: 1044 EKKGKGVETGTSSGILMKPDEVPKEMRLATLDIFAGCGGLSHGLEKAGVSNTKWAIEYEE 1103
Query: 251 AAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDD 285
A AFK N+P TVFVD+CN IL+ ++ E C D
Sbjct: 1104 PAGHAFKQNHPEATVFVDNCNVILRAIM--EKCGD 1136
>UNIPROTKB|K7ENW7 [details] [associations]
symbol:DNMT1 "DNA (cytosine-5)-methyltransferase 1"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006306 "DNA methylation" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] InterPro:IPR001525
Pfam:PF00145 PRINTS:PR00105 EMBL:AC020931 PANTHER:PTHR10629
EMBL:AC010077 EMBL:AC011511 HGNC:HGNC:2976 Ensembl:ENST00000588913
Uniprot:K7ENW7
Length = 389
Score = 635 (228.6 bits), Expect = 3.8e-62, P = 3.8e-62
Identities = 118/174 (67%), Positives = 138/174 (79%)
Query: 305 CQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMR 364
CQGFSGMNRFN R YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+R
Sbjct: 2 CQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLR 61
Query: 365 CLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTI 424
CL ++GYQCTFG LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V +
Sbjct: 62 CLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVV 121
Query: 425 SKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQRE 478
K +VS S P+RTITVRD MSDLPE++NG E+ Y S FQR+
Sbjct: 122 DDKKFVSNITRLSSGPFRTITVRDTMSDLPEVRNGASALEISYNGEPQSWFQRQ 175
>TAIR|locus:2140892 [details] [associations]
symbol:MEE57 "maternal effect embryo arrest 57"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003886 "DNA (cytosine-5-)-methyltransferase
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006306 "DNA methylation" evidence=IEA;ISS] [GO:0090116 "C-5
methylation of cytosine" evidence=IEA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=IMP] [GO:0006333
"chromatin assembly or disassembly" evidence=RCA]
InterPro:IPR001025 InterPro:IPR001525 InterPro:IPR017198
InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426 PIRSF:PIRSF037404
PRINTS:PR00105 PROSITE:PS00094 PROSITE:PS00095 PROSITE:PS51038
SMART:SM00439 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0009793 EMBL:AL049656 EMBL:AL161537
eggNOG:COG0270 KO:K00558 GO:GO:0003886 PANTHER:PTHR10629
HSSP:O14717 TIGRFAMs:TIGR00675 InterPro:IPR022702 Pfam:PF12047
HOGENOM:HOG000083447 ProtClustDB:CLSN2685944 REBASE:2839
IPI:IPI00536439 PIR:T06663 RefSeq:NP_193097.1 UniGene:At.54310
ProteinModelPortal:Q9T0I1 SMR:Q9T0I1 STRING:Q9T0I1 PRIDE:Q9T0I1
EnsemblPlants:AT4G13610.1 GeneID:826994 KEGG:ath:AT4G13610
TAIR:At4g13610 InParanoid:Q9T0I1 OMA:ENWTISG PhylomeDB:Q9T0I1
ArrayExpress:Q9T0I1 Genevestigator:Q9T0I1 Uniprot:Q9T0I1
Length = 1404
Score = 435 (158.2 bits), Expect = 1.3e-61, Sum P(2) = 1.3e-61
Identities = 82/195 (42%), Positives = 130/195 (66%)
Query: 267 VDDCNKILQRV-IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNS 325
VDDC + + ++ +++K LP G+V+ + GGPPCQGFS +NRF+ +S +
Sbjct: 1046 VDDCISTTEAAELATKLDENQKSTLPLPGQVDFISGGPPCQGFSRLNRFSDGSWSKNQCQ 1105
Query: 326 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 385
+I+++LS+ DY+RP++FLLENV+ FV+F +T+ L ++GYQ FG L+AG +G+
Sbjct: 1106 MILAFLSFADYFRPKYFLLENVKTFVSFNEGHTFHLTVASLLEMGYQVRFGLLEAGAYGI 1165
Query: 386 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQ-SAPYRTI 444
SQ R+RA + AAAP EVLP++PEP VF+ + +S+ + + + T+ AP+R+I
Sbjct: 1166 SQPRKRAFIWAAAPNEVLPEWPEPMHVFN--NPGFKIPLSQGLHYAAVQSTKFGAPFRSI 1223
Query: 445 TVRDVMSDLPEIQNG 459
TVRD + DLP I++G
Sbjct: 1224 TVRDAIGDLPPIESG 1238
Score = 239 (89.2 bits), Expect = 1.3e-61, Sum P(2) = 1.3e-61
Identities = 63/207 (30%), Positives = 105/207 (50%)
Query: 71 FGIGYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQV 130
F + I+ I K K + + + V++FYRP++ S E Y D+ ++Y+S++ +
Sbjct: 825 FVVCQILDIVDLKEPKKGNTTSFEVKVRRFYRPDDV--SAEEAYASDIQEVYYSEDTYIL 882
Query: 131 SLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLXXXXX 190
++GKC V+ + ++ + R H ++ + Y+S LP +
Sbjct: 883 PPEAIKGKCEVMKKTDMPLC--REYPILDHVYFCDRFYDSSNGCLKKLPYNMMLKFSTIK 940
Query: 191 XXXXXXNQTNKPEEKDEIT--EWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEF 248
+ + + E P R L L++FAG GGLS GL+K+GV+ + WAIE+
Sbjct: 941 DDTLLREKKTETGSAMLLKPDEVPKGKR-LATLDIFAGCGGLSYGLEKAGVSDTKWAIEY 999
Query: 249 DSAAATAFKMNNPGCTVFVDDCNKILQ 275
+ AA AFK N+P TVFVD+CN IL+
Sbjct: 1000 EEPAAQAFKQNHPKTTVFVDNCNVILR 1026
>UNIPROTKB|F1PAS9 [details] [associations]
symbol:DNMT1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0006306 "DNA methylation" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001525
Pfam:PF00145 PRINTS:PR00105 GO:GO:0003677 GO:GO:0006306
GO:GO:0008168 PANTHER:PTHR10629 GeneTree:ENSGT00390000005100
EMBL:AAEX03010534 Ensembl:ENSCAFT00000013291 OMA:TEDCHAL
Uniprot:F1PAS9
Length = 477
Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
Identities = 133/328 (40%), Positives = 179/328 (54%)
Query: 156 SRGPHRFYFNEAYNSKTEEFTNLPTEALFLXXXXXXXXX----XXNQTNKPEEKDEITEW 211
S GP R Y EAY++K + F + P A +QT +P E + +
Sbjct: 1 SGGPDRLYCLEAYSAKNKSFEDPPNHAHSPGNKGKGKGRGKGEAKSQTCEPSEPETEIKL 60
Query: 212 PSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCN 271
P LR + F+G GG G ++G+ + WAIE AA NNPG T F +DC+
Sbjct: 61 PK----LRTSDAFSGCGGWWGG-HRAGLPETLWAIEMWDPAA-----NNPGST-FTEDCH 109
Query: 272 KILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYL 331
+ + + PR+G V MLCGGPPCQG G+NR S KN+L+VS L
Sbjct: 110 ALPKLAMAGRT---NPPACPRRGAVVMLCGGPPCQGL-GINRVTSPTCSKLKNTLVVSLL 165
Query: 332 SYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRR 391
SYCDYYRPR FLLENVRN V+F+ S VL++++ + Q T G QAG G +QT+RR
Sbjct: 166 SYCDYYRPRCFLLENVRNSVSFQRSTVLRLSVPA-SSTWLQWTPGVSQAGRCGPAQTQRR 224
Query: 392 AIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYRTITVRDVMS 451
AI+LAAAPG+ P PE VF+ R QL+V + K+ +VS S P+RTITVRD +S
Sbjct: 225 AIILAAAPGKP-PLAPELLRVFAARACQLSVVVDKR-FVSNVTGFSSGPFRTITVRDTVS 282
Query: 452 D-LPEIQNGCKMEELPYKENALSHFQRE 478
D L + ++G + Y S QR+
Sbjct: 283 DNLKKKKSGASGLGILYDGEPQSWLQRQ 310
>UNIPROTKB|D4A0P3 [details] [associations]
symbol:Dnmt1 "DNA (cytosine-5)-methyltransferase 1"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003886 "DNA (cytosine-5-)-methyltransferase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001025
InterPro:IPR001525 InterPro:IPR002857 InterPro:IPR010506
InterPro:IPR017198 InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426
Pfam:PF02008 Pfam:PF06464 PIRSF:PIRSF037404 PROSITE:PS00095
PROSITE:PS51038 PROSITE:PS51058 SMART:SM00439 GO:GO:0005634
GO:GO:0003677 GO:GO:0008270 GO:GO:0003886 PANTHER:PTHR10629
InterPro:IPR022702 Pfam:PF12047 GeneTree:ENSGT00390000005100
IPI:IPI00947847 ProteinModelPortal:D4A0P3
Ensembl:ENSRNOT00000064304 ArrayExpress:D4A0P3 Uniprot:D4A0P3
Length = 1410
Score = 440 (159.9 bits), Expect = 2.1e-41, Sum P(2) = 2.1e-41
Identities = 108/305 (35%), Positives = 160/305 (52%)
Query: 1 LYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYM 60
+Y + ++ G Y+L VY+ P+ F F K S ++ +KR +E LYPE YRK SDY+
Sbjct: 924 VYCSSITKNGVVYRLGDSVYLPPEAFTFNIKMASPMKRSKRDPVNENLYPEHYRKYSDYI 983
Query: 61 KGSNAYTPAPFGIGYIVAIF--KKKGKKNVSASDVFLTVKKFYRPE-NTHRSVEFTYQLD 117
KGSN P P+ IG I I KKKG K V+ +D+ + + KFYR TH + D
Sbjct: 984 KGSNLDAPEPYRIGRIKEIHCGKKKGGK-VNEADIKIRLYKFYRKHARTHSQMHAHSHAD 1042
Query: 118 LNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTN 177
+ + + VS ++ + + Q WSS F+F EAYNSKT+ F +
Sbjct: 1043 GSLGFEASLVCIVSFRTIKATQRIPVSETKQNWVSFWSSGSLFFFFFLEAYNSKTKSFED 1102
Query: 178 LPTEALFLXXXXXXXXXXXNQTNKPEEKDEITEWPSIARP-LRCLEVFAGAGGLSRGLDK 236
P A + KP+ + +I P LR L+VF+G GGL+ G +
Sbjct: 1103 PPNHARSPGNKGKGKGKGKGK-GKPQVSEPKEPEAAIKLPKLRTLDVFSGCGGLTEGFHQ 1161
Query: 237 SGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEV 296
+G++ + WAIE AA AF++NNPG TVF +DCN +L+ V+ EV + Q+LP+K +
Sbjct: 1162 AGISETLWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLLKLVMAGEVTNSLGQRLPQKRHI 1221
Query: 297 EMLCG 301
+ G
Sbjct: 1222 PLSPG 1226
Score = 42 (19.8 bits), Expect = 2.1e-41, Sum P(2) = 2.1e-41
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 2 YYNCVSYEGEQYKLKSCVYVNPD 24
YY VS + E ++ CV V PD
Sbjct: 749 YYWKVSIDEETLEVGDCVSVIPD 771
>TAIR|locus:2117104 [details] [associations]
symbol:CMT2 "chromomethylase 2" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0006306 "DNA methylation"
evidence=IEA;ISS] InterPro:IPR000953 InterPro:IPR001025
InterPro:IPR001525 Pfam:PF00145 Pfam:PF01426 PRINTS:PR00105
PROSITE:PS50013 PROSITE:PS51038 SMART:SM00298 SMART:SM00439
Pfam:PF00385 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0006355 GO:GO:0003677 EMBL:AL021711 EMBL:AL161549
GO:GO:0006351 GO:GO:0016568 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR023780 PROSITE:PS00598 eggNOG:COG0270 KO:K00558
GO:GO:0003886 GO:GO:0090116 InterPro:IPR025821 PANTHER:PTHR10629
EMBL:AF383171 EMBL:BX828439 IPI:IPI00539325 PIR:T05039
RefSeq:NP_193637.2 UniGene:At.32846 ProteinModelPortal:Q94F87
SMR:Q94F87 STRING:Q94F87 REBASE:3168 PaxDb:Q94F87 PRIDE:Q94F87
EnsemblPlants:AT4G19020.1 GeneID:827640 KEGG:ath:AT4G19020
TAIR:At4g19020 InParanoid:Q94F87 OMA:NGCQLRR PhylomeDB:Q94F87
Genevestigator:Q94F87 GermOnline:AT4G19020 Uniprot:Q94F87
Length = 1295
Score = 250 (93.1 bits), Expect = 3.2e-23, Sum P(2) = 3.2e-23
Identities = 58/194 (29%), Positives = 95/194 (48%)
Query: 286 KKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQ--RQYSAFKNSLIVSYLSYCDYYRPRFFL 343
K + LP G V ++CGGPPCQG SG NR + +N I+ ++ +Y +P + L
Sbjct: 896 KSKILPLPGRVGVICGGPPCQGISGYNRHRNVDSPLNDERNQQIIVFMDIVEYLKPSYVL 955
Query: 344 LENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVL 403
+ENV + + + + + L + YQ G + AG +G+SQ R R + A P + L
Sbjct: 956 MENVVDILRMDKGSLGRYALSRLVNMRYQARLGIMTAGCYGLSQFRSRVFMWGAVPNKNL 1015
Query: 404 PKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKME 463
P +P P R L + + V+ + + + ++D +SDLP + N E
Sbjct: 1016 PPFPLPTHDVIVRYG-LPLEFERNV-VAYAEGQPRKLEKALVLKDAISDLPHVSNDEDRE 1073
Query: 464 ELPYKENALSHFQR 477
+LPY+ + FQR
Sbjct: 1074 KLPYESLPKTDFQR 1087
Score = 100 (40.3 bits), Expect = 3.2e-23, Sum P(2) = 3.2e-23
Identities = 62/269 (23%), Positives = 107/269 (39%)
Query: 27 KFKSKPQSAVQNNKRPVEDEEL-YPEAYRKLSDYMKGSNAYTPAP---FGIGYIVAIFKK 82
K KS+ Q + + + V + E Y +A + G AY +G IV FK
Sbjct: 547 KSKSRGQQSEDDEDKIVANVECHYSQAKVDGHTFSLGDFAYIKGEEEETHVGQIVEFFK- 605
Query: 83 KGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVV 142
+ + + V+ FYR +T + T D +L++S ++D C +
Sbjct: 606 -----TTDGESYFRVQWFYRATDTIMERQATNH-DKRRLFYS-----TVMNDNPVDCLIS 654
Query: 143 CEDNLQISTDRWSSRGPHR--FYFNEAYNSKTEEFTNLPTEALFLXXXXXXXXXXXNQTN 200
LQ+S + +YF+ Y + F L
Sbjct: 655 KVTVLQVSPRVGLKPNSIKSDYYFDMEYCVEYSTFQTLRNPK-----TSENKLECCADVV 709
Query: 201 KPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDK----SGVARST-WAIEFDSAAATA 255
E + I + S + L L++++G GG+S GL SGV T WA++ ++AA +
Sbjct: 710 PTESTESILKKKSFSGELPVLDLYSGCGGMSTGLSLGAKISGVDVVTKWAVDQNTAACKS 769
Query: 256 FKMNNPGCTVFVDDCNKILQRVID-NEVC 283
K+N+P V D LQ + + +++C
Sbjct: 770 LKLNHPNTQVRNDAAGDFLQLLKEWDKLC 798
>TAIR|locus:2205015 [details] [associations]
symbol:CMT3 "chromomethylase 3" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0006306 "DNA methylation"
evidence=IEA;RCA;IMP] [GO:0006342 "chromatin silencing"
evidence=IGI;RCA] [GO:0010425 "DNA methylation on cytosine within a
CNG sequence" evidence=IMP] [GO:0045814 "negative regulation of
gene expression, epigenetic" evidence=IGI] [GO:0003886 "DNA
(cytosine-5-)-methyltransferase activity" evidence=IMP] [GO:0010069
"zygote asymmetric cytokinesis in embryo sac" evidence=IMP]
[GO:0051567 "histone H3-K9 methylation" evidence=IGI;RCA]
[GO:0006260 "DNA replication" evidence=RCA] [GO:0006261
"DNA-dependent DNA replication" evidence=RCA] [GO:0006270 "DNA
replication initiation" evidence=RCA] [GO:0006275 "regulation of
DNA replication" evidence=RCA] [GO:0006346 "methylation-dependent
chromatin silencing" evidence=RCA] [GO:0008283 "cell proliferation"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0016458 "gene silencing" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0031047
"gene silencing by RNA" evidence=RCA] [GO:0031048 "chromatin
silencing by small RNA" evidence=RCA] [GO:0034968 "histone lysine
methylation" evidence=RCA] [GO:0051726 "regulation of cell cycle"
evidence=RCA] InterPro:IPR000953 InterPro:IPR001025
InterPro:IPR001525 InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426
PRINTS:PR00105 PROSITE:PS00094 PROSITE:PS50013 PROSITE:PS51038
SMART:SM00298 SMART:SM00439 Pfam:PF00385 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0006351
GO:GO:0006342 GO:GO:0051567 InterPro:IPR016197 SUPFAM:SSF54160
EMBL:AC013289 InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
eggNOG:COG0270 KO:K00558 GO:GO:0003886 InterPro:IPR025821
PANTHER:PTHR10629 TIGRFAMs:TIGR00675 EMBL:AF383170 EMBL:AF364174
IPI:IPI00534552 PIR:G96719 RefSeq:NP_177135.1 UniGene:At.35376
ProteinModelPortal:Q94F88 SMR:Q94F88 STRING:Q94F88 REBASE:4853
PaxDb:Q94F88 PRIDE:Q94F88 EnsemblPlants:AT1G69770.1 GeneID:843313
KEGG:ath:AT1G69770 TAIR:At1g69770 HOGENOM:HOG000082844
InParanoid:Q94F88 OMA:EWEKLCI PhylomeDB:Q94F88
ProtClustDB:CLSN2913566 Genevestigator:Q94F88 GermOnline:AT1G69770
GO:GO:0010425 GO:GO:0010069 Uniprot:Q94F88
Length = 839
Score = 260 (96.6 bits), Expect = 4.1e-22, Sum P(2) = 4.1e-22
Identities = 59/193 (30%), Positives = 102/193 (52%)
Query: 290 LPRKGEVEMLCGGPPCQGFSGMNRFNQR--QYSAFKNSLIVSYLSYCDYYRPRFFLLENV 347
LP G V+++CGGPPCQG SG NRF KN ++ Y++ +Y +P+F L+ENV
Sbjct: 445 LPLPGGVDVVCGGPPCQGISGHNRFRNLLDPLEDQKNKQLLVYMNIVEYLKPKFVLMENV 504
Query: 348 RNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYP 407
+ + + + + L Q+ YQ G + AG +G++Q R R + A P E++P++P
Sbjct: 505 VDMLKMAKGYLARFAVGRLLQMNYQVRNGMMAAGAYGLAQFRLRFFLWGALPSEIIPQFP 564
Query: 408 EPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYRT---ITVRDVMSDLPEIQNGCKMEE 464
P R + I K+ + + + + + ++DV+SDLP + N K +E
Sbjct: 565 LPTHDLVHRGN-----IVKEFQGNIVAYDEGHTVKLADKLLLKDVISDLPAVANSEKRDE 619
Query: 465 LPYKENALSHFQR 477
+ Y ++ + FQ+
Sbjct: 620 ITYDKDPTTPFQK 632
Score = 73 (30.8 bits), Expect = 4.1e-22, Sum P(2) = 4.1e-22
Identities = 33/181 (18%), Positives = 73/181 (40%)
Query: 93 VFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTD 152
++ T + FYRP +T EF + ++++S+ ++ L ++ K ++ + + +
Sbjct: 142 LYFTARWFYRPSDTVMK-EFEILIKKKRVFFSEIQDTNELGLLEKKLNILMIPLNENTKE 200
Query: 153 RWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLXXXXXXXXXXXNQTNKPEEKDEITEWP 212
+ F+ + Y + F + E + + EI E
Sbjct: 201 TIPATENCDFFCDMNYFLPYDTFEAIQQETMMAISESSTISSDTDIREGAAAISEIGECS 260
Query: 213 SIA---RPLRCLEVFAGAGGLSRGL----DKSGVARST-WAIEFDSAAATAFKMNNPGCT 264
+ L++++G G +S GL SG+ T WA++ ++ A + + N+P
Sbjct: 261 QETEGHKKATLLDLYSGCGAMSTGLCMGAQLSGLNLVTKWAVDMNAHACKSLQHNHPETN 320
Query: 265 V 265
V
Sbjct: 321 V 321
>TAIR|locus:2025787 [details] [associations]
symbol:CMT1 "chromomethylase 1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0006306 "DNA methylation"
evidence=IEA;ISS] [GO:0009294 "DNA mediated transformation"
evidence=IMP] InterPro:IPR000953 InterPro:IPR001025
InterPro:IPR001525 Pfam:PF00145 Pfam:PF01426 PRINTS:PR00105
PROSITE:PS50013 PROSITE:PS51038 SMART:SM00298 SMART:SM00439
Pfam:PF00385 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 GO:GO:0016568
InterPro:IPR016197 SUPFAM:SSF54160 GO:GO:0009294 InterPro:IPR017984
InterPro:IPR023780 InterPro:IPR023779 PRINTS:PR00504
PROSITE:PS00598 EMBL:AC011713 EMBL:AF039364 EMBL:AF039366
EMBL:AF039367 EMBL:AF039368 EMBL:AF039369 EMBL:AF039370
EMBL:AF039371 EMBL:AF039372 EMBL:AF039373 EMBL:U53501
IPI:IPI00531370 IPI:IPI00782822 PIR:H96839 RefSeq:NP_565245.1
UniGene:At.5460 ProteinModelPortal:O49139 SMR:O49139 STRING:O49139
REBASE:3262 PaxDb:O49139 PRIDE:O49139 EnsemblPlants:AT1G80740.1
GeneID:844413 KEGG:ath:AT1G80740 TAIR:At1g80740 eggNOG:COG0270
InParanoid:O49139 KO:K00558 OMA:FPDCYKL PhylomeDB:O49139
ProtClustDB:CLSN2917515 ArrayExpress:O49139 Genevestigator:O49139
GermOnline:AT1G80740 GO:GO:0003886 GO:GO:0090116 InterPro:IPR025821
PANTHER:PTHR10629 Uniprot:O49139
Length = 791
Score = 250 (93.1 bits), Expect = 6.8e-20, Sum P(2) = 6.8e-20
Identities = 62/206 (30%), Positives = 96/206 (46%)
Query: 269 DCN-KILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRF--NQRQYSAFKNS 325
+C K+ + VID K LP G V +CGGPPCQG SG NR+ N+ KN
Sbjct: 384 NCKEKLKEYVIDGF----KSHLLPLPGTVYTVCGGPPCQGISGYNRYRNNEAPLEDQKNQ 439
Query: 326 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 385
++ +L D+ +P + L+ENV + + F + + + + YQ G + AG +G+
Sbjct: 440 QLLVFLDIIDFLKPNYVLMENVVDLLRFSKGFLARHAVASFVAMNYQTRLGMMAAGSYGL 499
Query: 386 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYRTIT 445
Q R R + AA P E LP YP P + + + K V + +T
Sbjct: 500 PQLRNRVFLWAAQPSEKLPPYPLPTHEVAKKFNTPKEF--KDLQVGRIQMEFLKLDNALT 557
Query: 446 VRDVMSDLPEIQNGCKMEELPYKENA 471
+ D +SDLP + N + + Y + A
Sbjct: 558 LADAISDLPPVTNYVANDVMDYNDAA 583
Score = 62 (26.9 bits), Expect = 6.8e-20, Sum P(2) = 6.8e-20
Identities = 14/46 (30%), Positives = 26/46 (56%)
Query: 221 LEVFAGAGGLSRGL----DKSGVARST-WAIEFDSAAATAFKMNNP 261
L++++G G +S G SGV T W+++ + A + K+N+P
Sbjct: 228 LDLYSGCGAMSTGFCMGASISGVKLITKWSVDINKFACDSLKLNHP 273
>TIGR_CMR|SPO_1049 [details] [associations]
symbol:SPO_1049 "DNA methylase, C-5 cytosine-specific
family" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003886 "DNA
(cytosine-5-)-methyltransferase activity" evidence=ISS] [GO:0006304
"DNA modification" evidence=ISS] InterPro:IPR001525 Pfam:PF00145
PRINTS:PR00105 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0003677 GO:GO:0006306 GO:GO:0008168 KO:K00558
PANTHER:PTHR10629 TIGRFAMs:TIGR00675 OMA:LLYEFAR RefSeq:YP_166300.1
ProteinModelPortal:Q5LUK5 REBASE:10710 GeneID:3194254
KEGG:sil:SPO1049 PATRIC:23375391 HOGENOM:HOG000225505
ProtClustDB:CLSK933423 Uniprot:Q5LUK5
Length = 373
Score = 194 (73.4 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 62/205 (30%), Positives = 94/205 (45%)
Query: 221 LEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKI-LQRVID 279
+++F GAGGLS GL+ +G FD+A T F+ +P + ++ ++
Sbjct: 6 IDLFCGAGGLSAGLEMAGFTVLAGNDIFDAAGKT-FEATHPRAKFIPGPIEDLTIEHLL- 63
Query: 280 NEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRP 339
EV K P GE+ +L GGPPCQ +S N +QR + +L YL D RP
Sbjct: 64 -EVTGLK----P--GELTVLAGGPPCQAYSVYN--HQRGMHDERATLFKEYLRIVDGLRP 114
Query: 340 RFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAP 399
+ ++ENV + + L +GY+ L+A +GV Q RRR + +
Sbjct: 115 EWIVMENVTGIYSIGGGEAVAAIKSELAALGYEVEEAVLRAEEYGVPQERRRVVFIGNRV 174
Query: 400 GEVLPKYPEPWTVFSPRTSQLNVTI 424
G + +PEP P S VTI
Sbjct: 175 GVPI-SHPEP--THGPGRSMPFVTI 196
Score = 66 (28.3 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 12/42 (28%), Positives = 25/42 (59%)
Query: 437 QSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQRE 478
+S P+ +T++D + DLP ++NG + Y + + +QR+
Sbjct: 189 RSMPF--VTIKDAIGDLPALENGEAKPDAAYLDGKPTSYQRQ 228
>UNIPROTKB|O34939 [details] [associations]
symbol:ydiO "Probable BsuMI modification methylase subunit
YdiO" species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0008168 "methyltransferase activity" evidence=NAS] [GO:0009307
"DNA restriction-modification system" evidence=IMP] [GO:0032776
"DNA methylation on cytosine" evidence=IMP] InterPro:IPR001525
Pfam:PF00145 PRINTS:PR00105 PROSITE:PS00094 PROSITE:PS00095
GO:GO:0003677 EMBL:AL009126 GenomeReviews:AL009126_GR GO:GO:0008168
eggNOG:COG0270 KO:K00558 GO:GO:0003886 GO:GO:0090116
PANTHER:PTHR10629 HSSP:O14717 TIGRFAMs:TIGR00675 GO:GO:0009307
EMBL:AB007637 PIR:H69787 RefSeq:NP_388487.1
ProteinModelPortal:O34939 SMR:O34939 REBASE:3612
EnsemblBacteria:EBBACT00000001239 GeneID:939892 KEGG:bsu:BSU06060
PATRIC:18972844 GenoList:BSU06060 HOGENOM:HOG000098493 OMA:LLYEFAR
ProtClustDB:CLSK2460890 BioCyc:BSUB:BSU06060-MONOMER Uniprot:O34939
Length = 427
Score = 161 (61.7 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 50/186 (26%), Positives = 97/186 (52%)
Query: 222 EVFAGAGGLSRGLDKS----GV-ARSTWAIEFDSAAATAFKMN-NPGCTVFVDDCNKILQ 275
++F+G GGLS G+ ++ G+ R ++A + + AA + ++ N +P ++ N+ ++
Sbjct: 88 DLFSGCGGLSLGVWEACRALGINPRFSFACDLNEAALSVYEKNFSPDFSL-----NESIE 142
Query: 276 RVIDNEV---CDDKKQKLPRK-GEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYL 331
+ I+ E+ ++Q++ K +++ + GPPCQG S +N +R+ +N+L++
Sbjct: 143 KHINGELGAPLTVEEQRIKDKVKKIDFILAGPPCQGHSDLNNHTRRKDP--RNALLMRVS 200
Query: 332 SYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRR 391
+ ++P L+ENV + K+ + TQ GY L A GVSQ RRR
Sbjct: 201 RVIELFQPSSVLVENVPGIIHDKSGSFKEFKNHLKTQ-GYYFDEIVLNAEKLGVSQARRR 259
Query: 392 AIVLAA 397
+ A+
Sbjct: 260 YFIFAS 265
>UNIPROTKB|P0AED9 [details] [associations]
symbol:dcm "DNA-cytosine methyltransferase" species:83333
"Escherichia coli K-12" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0090116 "C-5 methylation of cytosine" evidence=IEA;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0003886 "DNA
(cytosine-5-)-methyltransferase activity" evidence=IEA;IDA]
[GO:0009307 "DNA restriction-modification system" evidence=IEA;IDA]
[GO:0006306 "DNA methylation" evidence=IDA] InterPro:IPR001525
InterPro:IPR018117 Pfam:PF00145 PRINTS:PR00105 PROSITE:PS00094
PROSITE:PS00095 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0003677 eggNOG:COG0270 KO:K00558
GO:GO:0003886 PANTHER:PTHR10629 TIGRFAMs:TIGR00675 EMBL:X13330
EMBL:M32307 PIR:A37754 RefSeq:NP_416470.1 RefSeq:YP_490214.1
ProteinModelPortal:P0AED9 SMR:P0AED9 DIP:DIP-47858N IntAct:P0AED9
MINT:MINT-1237420 REBASE:2397 EnsemblBacteria:EBESCT00000002119
EnsemblBacteria:EBESCT00000014413 GeneID:12931871 GeneID:946479
KEGG:ecj:Y75_p1930 KEGG:eco:b1961 PATRIC:32119251 EchoBASE:EB0207
EcoGene:EG10211 HOGENOM:HOG000225506 OMA:KHRAAGN
ProtClustDB:PRK10458 BioCyc:EcoCyc:EG10211-MONOMER
BioCyc:ECOL316407:JW1944-MONOMER BioCyc:MetaCyc:EG10211-MONOMER
Genevestigator:P0AED9 GO:GO:0009307 Uniprot:P0AED9
Length = 472
Score = 148 (57.2 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 46/167 (27%), Positives = 79/167 (47%)
Query: 219 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN---PGCTVFVDDCNKIL- 274
R +++FAG GG+ RG + G + + E++ A +K N+ P F +D I
Sbjct: 88 RFIDLFAGIGGIRRGFESIG-GQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIRDITL 146
Query: 275 ---QRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFS--GMNRFNQR-QYSAF----KN 324
+ V D + +Q +P E ++L G PCQ FS G+++ N + F +
Sbjct: 147 SHKEGVSDEAAAEHIRQHIP---EHDVLLAGFPCQPFSLAGVSKKNSLGRAHGFACDTQG 203
Query: 325 SLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGY 371
+L + D RP F+LENV+N + ++ M+ L ++GY
Sbjct: 204 TLFFDVVRIIDARRPAMFVLENVKNLKSHDQGKTFRIIMQTLDELGY 250
>UNIPROTKB|Q2KFY7 [details] [associations]
symbol:MGCH7_ch7g548 "Putative uncharacterized protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001525 Pfam:PF00145
PRINTS:PR00105 GO:GO:0003677 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0006306 GO:GO:0008168 EMBL:CM000230
PANTHER:PTHR10629 ProteinModelPortal:Q2KFY7 Uniprot:Q2KFY7
Length = 877
Score = 155 (59.6 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 50/186 (26%), Positives = 82/186 (44%)
Query: 222 EVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNE 281
++F GAGG S+G +G R +A+E + AA ++ N P +F D LQR N+
Sbjct: 457 DMFCGAGGASQGARAAGF-RLGYAVEHWNHAAATYRHNFPEVNLFEGDIFDFLQR---ND 512
Query: 282 VCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRF 341
+ V++L PPCQ +S + + + + + RPR
Sbjct: 513 L-----------DFVDILHLSPPCQYWSPA-KTRPGKNDEINRAALFACGDVVQKLRPRL 560
Query: 342 FLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGE 401
F LE + + ++ T + Y +G + +GV Q RRR +++ + PGE
Sbjct: 561 FTLEQTFGILREMHRPYFNKLVQWFTTLRYSVEWGIVHLQDWGVPQPRRRLVMIGSCPGE 620
Query: 402 VLPKYP 407
VLP P
Sbjct: 621 VLPALP 626
Score = 37 (18.1 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 402 VLPKYPEPWTV 412
VLP+YPE V
Sbjct: 825 VLPQYPESMVV 835
>UNIPROTKB|E2RM86 [details] [associations]
symbol:TRDMT1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0006306 "DNA methylation" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001525
InterPro:IPR018117 Pfam:PF00145 PRINTS:PR00105 PROSITE:PS00095
GO:GO:0003677 GO:GO:0006306 GO:GO:0008168 PANTHER:PTHR10629
KO:K15336 OMA:LFYEFAR TIGRFAMs:TIGR00675 CTD:1787
GeneTree:ENSGT00390000016416 InterPro:IPR025813 PROSITE:PS51607
EMBL:AAEX03001247 RefSeq:XP_848593.1 ProteinModelPortal:E2RM86
Ensembl:ENSCAFT00000007328 GeneID:487116 KEGG:cfa:487116
NextBio:20860760 Uniprot:E2RM86
Length = 391
Score = 134 (52.2 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 54/210 (25%), Positives = 96/210 (45%)
Query: 217 PLRCLEVFAGAGGLSRGLDKSGV-ARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 275
PLR LE+++G GG+ + L +S + A+ AI+ ++ A +K N P ++L
Sbjct: 3 PLRVLELYSGIGGMHQALRESCIPAQVVAAIDVNTVANEVYKYNFPH--------TQLLA 54
Query: 276 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCD 335
+ I+ + ++ KL M+ PPCQ F+ + Q + + + ++ L+
Sbjct: 55 KTIEG-ITLEEFDKL----SFNMILMSPPCQPFTRIGL--QGDVTDPRTNSLLYILNILP 107
Query: 336 YYR--PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAI 393
+ P++ LLENV+ F S + ++ L G+Q L FG+ +R R
Sbjct: 108 RLQKLPKYVLLENVKGFEV---SSTRDLLIQTLENCGFQYQEFLLSPTSFGIPNSRLRYF 164
Query: 394 VLAAAPGEVLPKYPEPWTVFS--PRTSQLN 421
++A E LP + P V P+T N
Sbjct: 165 LIAKLQSEPLP-FQAPGQVLMEFPKTESEN 193
>UNIPROTKB|O14717 [details] [associations]
symbol:TRDMT1 "tRNA (cytosine(38)-C(5))-methyltransferase"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008033 "tRNA
processing" evidence=IEA] [GO:0001975 "response to amphetamine"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003886 "DNA
(cytosine-5-)-methyltransferase activity" evidence=TAS] [GO:0090116
"C-5 methylation of cytosine" evidence=TAS] InterPro:IPR001525
InterPro:IPR018117 Pfam:PF00145 PRINTS:PR00105 PROSITE:PS00094
PROSITE:PS00095 GO:GO:0005634 GO:GO:0003677 GO:GO:0001975
GO:GO:0003723 EMBL:CH471072 GO:GO:0008033 eggNOG:COG0270
GO:GO:0003886 PANTHER:PTHR10629 KO:K15336 OMA:LFYEFAR
TIGRFAMs:TIGR00675 EMBL:AC067747 CTD:1787 HOVERGEN:HBG051385
InterPro:IPR025813 EMBL:AF012128 EMBL:AJ223333 EMBL:AF045888
EMBL:EF444974 EMBL:AL133415 EMBL:BC047733 EMBL:AF329940
EMBL:AF329941 EMBL:AF329942 EMBL:AF329943 EMBL:AF329944
IPI:IPI00034003 IPI:IPI00219905 IPI:IPI00219906 IPI:IPI00219907
IPI:IPI00219908 IPI:IPI00221269 RefSeq:NP_004403.1
UniGene:Hs.351665 PDB:1G55 PDBsum:1G55 ProteinModelPortal:O14717
SMR:O14717 IntAct:O14717 STRING:O14717 PhosphoSite:O14717
PaxDb:O14717 PRIDE:O14717 Ensembl:ENST00000351358
Ensembl:ENST00000358282 Ensembl:ENST00000377799
Ensembl:ENST00000412821 Ensembl:ENST00000424636
Ensembl:ENST00000495022 Ensembl:ENST00000525762 GeneID:1787
KEGG:hsa:1787 UCSC:uc001iop.3 GeneCards:GC10M017098 HGNC:HGNC:2977
HPA:CAB009468 MIM:602478 neXtProt:NX_O14717 PharmGKB:PA162406922
InParanoid:O14717 PhylomeDB:O14717 BioCyc:MetaCyc:HS03011-MONOMER
ChiTaRS:TRDMT1 EvolutionaryTrace:O14717 GenomeRNAi:1787
NextBio:7271 ArrayExpress:O14717 Bgee:O14717 CleanEx:HS_TRDMT1
Genevestigator:O14717 GermOnline:ENSG00000107614 Uniprot:O14717
Length = 391
Score = 133 (51.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 50/191 (26%), Positives = 88/191 (46%)
Query: 217 PLRCLEVFAGAGGLSRGLDKSGV-ARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 275
PLR LE+++G GG+ L +S + A+ AI+ ++ A +K N P ++L
Sbjct: 3 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPH--------TQLLA 54
Query: 276 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSL-IVSYLSYC 334
+ I+ + ++ +L +M+ PPCQ F+ + R S + L I+ L
Sbjct: 55 KTIEG-ITLEEFDRL----SFDMILMSPPCQPFTRIGRQGDMTDSRTNSFLHILDILPRL 109
Query: 335 DYYRPRFFLLENVRNF-VAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAI 393
P++ LLENV+ F V+ ++++ C G+Q L G+ +R R
Sbjct: 110 QKL-PKYILLENVKGFEVSSTRDLLIQTIENC----GFQYQEFLLSPTSLGIPNSRLRYF 164
Query: 394 VLAAAPGEVLP 404
++A E LP
Sbjct: 165 LIAKLQSEPLP 175
>RGD|1306292 [details] [associations]
symbol:Trdmt1 "tRNA aspartic acid methyltransferase 1"
species:10116 "Rattus norvegicus" [GO:0001975 "response to
amphetamine" evidence=IEP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0006306 "DNA
methylation" evidence=IEA] [GO:0008033 "tRNA processing"
evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=IEA] InterPro:IPR001525 InterPro:IPR018117 Pfam:PF00145
PRINTS:PR00105 PROSITE:PS00094 PROSITE:PS00095 RGD:1306292
GO:GO:0005634 GO:GO:0003677 GO:GO:0001975 GO:GO:0003723
GO:GO:0008033 GO:GO:0006306 GO:GO:0008168 eggNOG:COG0270
PANTHER:PTHR10629 KO:K15336 TIGRFAMs:TIGR00675 HOGENOM:HOG000265038
OMA:RLMSFPE CTD:1787 GeneTree:ENSGT00390000016416
HOVERGEN:HBG051385 OrthoDB:EOG4MSCZB InterPro:IPR025813
EMBL:BC098700 IPI:IPI00363164 RefSeq:NP_001026813.1 UniGene:Rn.115
ProteinModelPortal:Q4G073 SMR:Q4G073 STRING:Q4G073 PRIDE:Q4G073
Ensembl:ENSRNOT00000038651 GeneID:291324 KEGG:rno:291324
UCSC:RGD:1306292 InParanoid:Q4G073 NextBio:632414
Genevestigator:Q4G073 GermOnline:ENSRNOG00000026132 Uniprot:Q4G073
Length = 391
Score = 131 (51.2 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 57/209 (27%), Positives = 92/209 (44%)
Query: 217 PLRCLEVFAGAGGLSRGLDKSGV-ARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 275
PLR LE+++G GG+ L +S V A AI+ + A +K N P +L
Sbjct: 3 PLRVLELYSGIGGMHHALRESRVPAHVVAAIDVSTVANEVYKHNFPH--------THLLA 54
Query: 276 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFS--GMNR-FNQRQYSAFKNSLIVSYLS 332
+ I+ + ++ KL M+ PPCQ F+ G+ + R+ ++F I+ L
Sbjct: 55 KTIEG-ISLEEFDKL----SFNMILMSPPCQPFTRIGLQGDMSDRRTNSFL--YILDILP 107
Query: 333 YCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRA 392
P++ LLENV+ F +L TM G+Q L G+ +R R
Sbjct: 108 RLQKL-PKYILLENVKGFEVSSTRGLLIQTMEAC---GFQYQEFLLSPSSLGIPNSRLRY 163
Query: 393 IVLAA---------APGEVLPKYPEPWTV 412
++A APG++L ++P TV
Sbjct: 164 FLIAKLQSEPLCFQAPGQILMEFPNSGTV 192
>UNIPROTKB|Q7YS61 [details] [associations]
symbol:TRDMT1 "tRNA (cytosine-5-)-methyltransferase"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0008033
"tRNA processing" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006306 "DNA methylation" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001525
InterPro:IPR018117 Pfam:PF00145 PRINTS:PR00105 PROSITE:PS00094
PROSITE:PS00095 GO:GO:0005634 GO:GO:0003677 GO:GO:0003723
GO:GO:0008033 GO:GO:0006306 GO:GO:0008168 eggNOG:COG0270
PANTHER:PTHR10629 KO:K15336 OMA:LFYEFAR TIGRFAMs:TIGR00675
HOGENOM:HOG000265038 EMBL:AY244708 EMBL:BT021768 IPI:IPI00708300
IPI:IPI00717277 RefSeq:NP_861528.1 UniGene:Bt.22960
ProteinModelPortal:Q7YS61 SMR:Q7YS61 STRING:Q7YS61 PRIDE:Q7YS61
Ensembl:ENSBTAT00000027378 GeneID:353353 KEGG:bta:353353 CTD:1787
GeneTree:ENSGT00390000016416 HOVERGEN:HBG051385 InParanoid:Q7YS61
OrthoDB:EOG4MSCZB NextBio:20812736 InterPro:IPR025813
Uniprot:Q7YS61
Length = 391
Score = 125 (49.1 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 55/232 (23%), Positives = 105/232 (45%)
Query: 217 PLRCLEVFAGAGGLSRGLDKSGV-ARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 275
PLR LE+++G GG+ + L +S + A+ A++ ++ A +K N P ++L
Sbjct: 3 PLRALELYSGIGGMHQALRESCIPAQVVAAVDVNTVANEVYKYNFPH--------TQLLA 54
Query: 276 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCD 335
+ I+ + ++ +L M+ PPCQ F+ + Q + + + + L
Sbjct: 55 KTIEG-ITLEEFDRL----SFNMILMSPPCQPFTRIGL--QGDVTDPRTNSFLHILDILP 107
Query: 336 YYR--PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAI 393
+ P++ LLENV+ F + S + ++ + G+Q L G+ +R R
Sbjct: 108 RLQKLPKYILLENVKGF---EMSSTRDLLIQTIENCGFQYQEFLLSPTSLGIPNSRLRYF 164
Query: 394 VLAA---------APGEVLPKYPEPWTVFSPRTSQLNV---TISKKTYVSTC 433
++A APG+VL ++P+ + P+ + +N T KKT C
Sbjct: 165 LIAKLQPEPFPFQAPGQVLMEFPKTESEHPPKYA-INAEKKTEEKKTGPKIC 215
>MGI|MGI:1274787 [details] [associations]
symbol:Trdmt1 "tRNA aspartic acid methyltransferase 1"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006306 "DNA methylation" evidence=IEA]
[GO:0008033 "tRNA processing" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0032259 "methylation" evidence=IEA]
InterPro:IPR001525 InterPro:IPR018117 Pfam:PF00145 PRINTS:PR00105
PROSITE:PS00094 PROSITE:PS00095 EMBL:AF012129 MGI:MGI:1274787
GO:GO:0005634 GO:GO:0003677 GO:GO:0001975 GO:GO:0003723
GO:GO:0008033 GO:GO:0006306 GO:GO:0008168 eggNOG:COG0270
PANTHER:PTHR10629 KO:K15336 TIGRFAMs:TIGR00675 BRENDA:2.1.1.37
HOGENOM:HOG000265038 OMA:RLMSFPE CTD:1787 HOVERGEN:HBG051385
OrthoDB:EOG4MSCZB InterPro:IPR025813 EMBL:AF045889 IPI:IPI00115186
RefSeq:NP_034197.3 UniGene:Mm.6979 ProteinModelPortal:O55055
SMR:O55055 STRING:O55055 PhosphoSite:O55055 PaxDb:O55055
PRIDE:O55055 Ensembl:ENSMUST00000124488 GeneID:13434 KEGG:mmu:13434
InParanoid:O55055 NextBio:283863 Bgee:O55055 CleanEx:MM_TRDMT1
Genevestigator:O55055 GermOnline:ENSMUSG00000026723 Uniprot:O55055
Length = 415
Score = 122 (48.0 bits), Expect = 0.00020, P = 0.00020
Identities = 54/208 (25%), Positives = 91/208 (43%)
Query: 217 PLRCLEVFAGAGGLSRGLDKSGV-ARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 275
PLR LE+++G GG+ L +S + A AI+ ++ A +K N P +L
Sbjct: 3 PLRVLELYSGIGGMHHALRESHIPAHVVAAIDVNTVANEVYKHNFPH--------THLLS 54
Query: 276 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSL-IVSYLSYC 334
+ I+ +D KL M+ PPCQ F+ + + L I+ L
Sbjct: 55 KTIEGISLEDF-DKL----SFNMILMSPPCQPFTRIGLQGDMTDPRTTSFLYILDILPRL 109
Query: 335 DYYRPRFFLLENVRNF-VAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAI 393
P++ LLENV+ F V+ ++++ C G+Q L G+ +R R
Sbjct: 110 QKL-PKYILLENVKGFEVSSTRGLLIQTIEAC----GFQYQEFLLSPSSLGIPNSRLRYF 164
Query: 394 VLAA---------APGEVLPKYPEPWTV 412
++A APG++L ++P+ TV
Sbjct: 165 LIAKLQSEPFPFQAPGQILMEFPKIVTV 192
>UNIPROTKB|Q9KMW8 [details] [associations]
symbol:VC_A0198 "Site-specific DNA-methyltransferase,
putative" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0006306 "DNA methylation" evidence=ISS]
InterPro:IPR001525 Pfam:PF00145 PRINTS:PR00105 GO:GO:0003677
EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0006306 GO:GO:0008168
KO:K00558 PANTHER:PTHR10629 TIGRFAMs:TIGR00675 PIR:H82487
RefSeq:NP_232598.1 ProteinModelPortal:Q9KMW8 REBASE:4763
GeneID:2612366 KEGG:vch:VCA0198 PATRIC:20084967 OMA:LTVEYWF
ProtClustDB:CLSK869556 Uniprot:Q9KMW8
Length = 383
Score = 116 (45.9 bits), Expect = 0.00081, P = 0.00081
Identities = 67/281 (23%), Positives = 107/281 (38%)
Query: 213 SIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNK 272
S ++P+ FAG+G L G + SG + EF A+K + +
Sbjct: 13 SPSKPI-IFSFFAGSGFLDLGFETSGFD-VRFVNEFHKPFLDAYKYSREHMGLPKPKYGH 70
Query: 273 ILQRVIDNEVCDDKKQ---KLPRKGEVEMLCG---GPPCQGFSGMNRFNQRQYSAFKNSL 326
L ID+ V +KKQ L ++ + E L G GPPC FS + N+ S +N +
Sbjct: 71 YLGS-IDDFVTGEKKQLLYDLVQEAKSEALTGFIGGPPCPDFSVAGK-NKG--SDGENGI 126
Query: 327 IVS-YLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRC-LTQIGYQCTFGTLQAGHFG 384
+ Y+ +P FFL ENV+ M+ L GY T + FG
Sbjct: 127 LTRVYIDAIVQNQPDFFLFENVKGLWKTGKHRAFYDAMKAHLEDAGYVLTDRLTNSIEFG 186
Query: 385 VSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYRTI 444
V Q R R ++ V K + + V K + W + A Y+
Sbjct: 187 VPQDRDRILMFGIHRKHVGDKLTSI-ELARDFDWEREVKFDKTKVLDKSIWPELATYKEN 245
Query: 445 TVRDVMSDLPEIQNGCKMEELPYKENALSHFQREKVWKCYS 485
++R + L + +E K + H + ++ YS
Sbjct: 246 SIRKLPKHLDNYRE-LTVEHWFQKNDVNQHLNAKHHFRPYS 285
>TIGR_CMR|VC_A0198 [details] [associations]
symbol:VC_A0198 "site-specific DNA-methyltransferase,
putative" species:686 "Vibrio cholerae O1 biovar El Tor"
[GO:0006306 "DNA methylation" evidence=ISS] InterPro:IPR001525
Pfam:PF00145 PRINTS:PR00105 GO:GO:0003677 EMBL:AE003853
GenomeReviews:AE003853_GR GO:GO:0006306 GO:GO:0008168 KO:K00558
PANTHER:PTHR10629 TIGRFAMs:TIGR00675 PIR:H82487 RefSeq:NP_232598.1
ProteinModelPortal:Q9KMW8 REBASE:4763 GeneID:2612366
KEGG:vch:VCA0198 PATRIC:20084967 OMA:LTVEYWF ProtClustDB:CLSK869556
Uniprot:Q9KMW8
Length = 383
Score = 116 (45.9 bits), Expect = 0.00081, P = 0.00081
Identities = 67/281 (23%), Positives = 107/281 (38%)
Query: 213 SIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNK 272
S ++P+ FAG+G L G + SG + EF A+K + +
Sbjct: 13 SPSKPI-IFSFFAGSGFLDLGFETSGFD-VRFVNEFHKPFLDAYKYSREHMGLPKPKYGH 70
Query: 273 ILQRVIDNEVCDDKKQ---KLPRKGEVEMLCG---GPPCQGFSGMNRFNQRQYSAFKNSL 326
L ID+ V +KKQ L ++ + E L G GPPC FS + N+ S +N +
Sbjct: 71 YLGS-IDDFVTGEKKQLLYDLVQEAKSEALTGFIGGPPCPDFSVAGK-NKG--SDGENGI 126
Query: 327 IVS-YLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRC-LTQIGYQCTFGTLQAGHFG 384
+ Y+ +P FFL ENV+ M+ L GY T + FG
Sbjct: 127 LTRVYIDAIVQNQPDFFLFENVKGLWKTGKHRAFYDAMKAHLEDAGYVLTDRLTNSIEFG 186
Query: 385 VSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYRTI 444
V Q R R ++ V K + + V K + W + A Y+
Sbjct: 187 VPQDRDRILMFGIHRKHVGDKLTSI-ELARDFDWEREVKFDKTKVLDKSIWPELATYKEN 245
Query: 445 TVRDVMSDLPEIQNGCKMEELPYKENALSHFQREKVWKCYS 485
++R + L + +E K + H + ++ YS
Sbjct: 246 SIRKLPKHLDNYRE-LTVEHWFQKNDVNQHLNAKHHFRPYS 285
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.134 0.413 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 487 476 0.00078 119 3 11 22 0.39 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 32
No. of states in DFA: 629 (67 KB)
Total size of DFA: 326 KB (2164 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 39.59u 0.09s 39.68t Elapsed: 00:00:04
Total cpu time: 39.59u 0.09s 39.68t Elapsed: 00:00:04
Start: Thu Aug 15 14:56:22 2013 End: Thu Aug 15 14:56:26 2013