BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13734
(820 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 111/356 (31%), Positives = 187/356 (52%), Gaps = 28/356 (7%)
Query: 476 LNDKGAIQVPDQYLPFGAGPDRLLVTDEQLWVEQRRFVLRQLREFGFGKRTMAQLVEEEA 535
+ +G I + D PF G + + W RRF + +R+FG GKR++ + ++EEA
Sbjct: 76 FSGRGKIAMVD---PFFRGYGVIFANGNR-WKVLRRFSVTTMRDFGMGKRSVEERIQEEA 131
Query: 536 YQLVQLFKQEVQDGGAIIPMRDAFSVPVLNTLWSMLAGIRYSPEDKELKKIQSLLTELFA 595
L++ ++ GA++ F N + S++ G R+ +D+E K+ +L + F+
Sbjct: 132 QCLIEELRK---SKGALMDPTFLFQSITANIICSIVFGKRFHYQDQEFLKMLNLFYQTFS 188
Query: 596 NIDMV-GALFSQFPILRYVAPEMSGY-KSFVSIHQKVWK-------FLRNELDNHKETFN 646
I V G LF F SG+ K F H++V+K ++ + ++ H+ET +
Sbjct: 189 LISSVFGQLFELF----------SGFLKHFPGAHRQVYKNLQEINAYIGHSVEKHRETLD 238
Query: 647 PDEMRDIMDVYLKTLKSE--DKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLH 704
P RD++D YL ++ E + FS L + +F AG+ETTS +L +GFL +L +
Sbjct: 239 PSAPRDLIDTYLLHMEKEKSNAHSEFSHQNLNLNTLSLFFAGTETTSTTLRYGFLLMLKY 298
Query: 705 PDVQKKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTL 764
P V ++ EI++V+G R P L+DR MPY EA+ YE R +PH + T+
Sbjct: 299 PHVAERVYREIEQVIGPHRPPELHDRAKMPYTEAVIYEIQRFSDLLPMGVPHIVTQHTSF 358
Query: 765 QGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAGR 820
+GY IPKDT + + L D ++ P+ F P+ FL+ GA++ + ++PF G+
Sbjct: 359 RGYIIPKDTEVFLILSTALHDPHYFEKPDAFNPDHFLDANGALKKTEAFIPFSLGK 414
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 167/351 (47%), Gaps = 43/351 (12%)
Query: 165 VDVLLSKAGLLVTDEQLWVEQRRFVLRQLREFGFGKRTMAQLVEEEAYQLVQLFKQEVQH 224
VD G++ + W RRF + +R+FG GKR++ + ++EEA L++ ++
Sbjct: 85 VDPFFRGYGVIFANGNRWKVLRRFSVTTMRDFGMGKRSVEERIQEEAQCLIEELRKS--- 141
Query: 225 LSLPGAIIPMRDAFSVPVLNTLWSMLAGIRYSPEDKELKKIQSLLTELFANIDMV-GALF 283
GA++ F N + S++ G R+ +D+E K+ +L + F+ I V G LF
Sbjct: 142 ---KGALMDPTFLFQSITANIICSIVFGKRFHYQDQEFLKMLNLFYQTFSLISSVFGQLF 198
Query: 284 SQFPILRYVAPEMSGY-KSFVSIHQKVWK-------FLRNELDNHKETFNPDEMRDIMDV 335
F SG+ K F H++V+K ++ + ++ H+ET +P RD++D
Sbjct: 199 ELF----------SGFLKHFPGAHRQVYKNLQEINAYIGHSVEKHRETLDPSAPRDLIDT 248
Query: 336 YLKTLKSE--DKTDTFSESQLLAICMDMFMAGSETTTT---------LPSRHVNSHDMI- 383
YL ++ E + FS L + +F AG+ETT+T L HV
Sbjct: 249 YLLHMEKEKSNAHSEFSHQNLNLNTLSLFFAGTETTSTTLRYGFLLMLKYPHVAERVYRE 308
Query: 384 VCFYLNRYLTSSMYTRSRRSLVQTLPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYF 443
+ + + ++ R++ +PY EA+ YE R +PH + T+ +GY
Sbjct: 309 IEQVIGPHRPPELHDRAK------MPYTEAVIYEIQRFSDLLPMGVPHIVTQHTSFRGYI 362
Query: 444 IPKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAG 494
IPKDT + + L D ++ P+ F P+ FL+ GA++ + ++PF G
Sbjct: 363 IPKDTEVFLILSTALHDPHYFEKPDAFNPDHFLDANGALKKTEAFIPFSLG 413
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/324 (32%), Positives = 177/324 (54%), Gaps = 13/324 (4%)
Query: 501 TDEQLWVEQRRFVLRQLREFGFGKRTMAQLVEEEAYQLVQLFKQEVQDGGAIIPMRDAFS 560
++ + W E RRF L LR FG GKR++ ++EEA LV+ ++ + P
Sbjct: 97 SNAKTWKEMRRFSLMTLRNFGMGKRSIEDRIQEEARCLVEELRK--TNASPCDPTFILGC 154
Query: 561 VPVLNTLWSMLAGIRYSPEDKELKKIQSLLTELFANIDMVGA----LFSQFPILRYVAPE 616
P N + S++ R+ +D+E K L+ L N++++G +++ FP L P
Sbjct: 155 APC-NVICSVIFHNRFDYKDEEFLK---LMESLHENVELLGTPWLQVYNNFPALLDYFPG 210
Query: 617 MSGYKSFVSIHQKVWKFLRNELDNHKETFNPDEMRDIMDVYLKTLKSEDKTDTFSESQLL 676
+ +K+ + + F+ ++ H++ + + RD +D +L ++ E+ + ES ++
Sbjct: 211 I--HKTLLKNADYIKNFIMEKVKEHQKLLDVNNPRDFIDCFLIKMEQENNLEFTLESLVI 268
Query: 677 AICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDRLPSLNDRPHMPYL 736
A+ D+F AG+ETTS +L + L LL HP+V + Q EI+RV+GR R P + DR MPY
Sbjct: 269 AVS-DLFGAGTETTSTTLRYSLLLLLKHPEVAARVQEEIERVIGRHRSPCMQDRSRMPYT 327
Query: 737 EAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFR 796
+A+ +E R ++PH RD + YFIPK T II + VL D++ + +P+VF
Sbjct: 328 DAVIHEIQRFIDLLPTNLPHAVTRDVRFRNYFIPKGTDIITSLTSVLHDEKAFPNPKVFD 387
Query: 797 PERFLNDKGAIQVPDQYLPFGAGR 820
P FL++ G + D ++PF AG+
Sbjct: 388 PGHFLDESGNFKKSDYFMPFSAGK 411
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 133/511 (26%), Positives = 223/511 (43%), Gaps = 97/511 (18%)
Query: 27 TKKPRNFPPGPDWIPILGSALAIQKLRNQTGYLYQACAELSKQYGPVVGLRVGKDRQVVC 86
T PPGP PI+G+ L I + ++ + S+ YGPV + +G VV
Sbjct: 5 TSSKGKLPPGPTPFPIIGNILQID-----AKDISKSLTKFSECYGPVFTVYLGMKPTVVL 59
Query: 87 FGYPAIKEMLSK--EEFDGRPRGPFYETRTWGKRQGLMEGTVTAKVLSSLKRREKEDRIG 144
GY A+KE L EEF G RG
Sbjct: 60 HGYEAVKEALVDLGEEFAG--RG------------------------------------- 80
Query: 145 ESQPFRERAGIKPVTALGYKVDVLLSKA-GLLVTDEQLWVEQRRFVLRQLREFGFGKRTM 203
S P E+ +SK G+ ++ + W E RRF L LR FG GKR++
Sbjct: 81 -SVPILEK----------------VSKGLGIAFSNAKTWKEMRRFSLMTLRNFGMGKRSI 123
Query: 204 AQLVEEEAYQLVQLFKQEVQHLSLPGAIIPMRDAFSVPVLNTLWSMLAGIRYSPEDKELK 263
++EEA LV+ ++ P I+ N + S++ R+ +D+E
Sbjct: 124 EDRIQEEARCLVEELRKTNASPCDPTFIL------GCAPCNVICSVIFHNRFDYKDEEFL 177
Query: 264 KIQSLLTELFANIDMVGA----LFSQFPILRYVAPEMSGYKSFVSIHQKVWKFLRNELDN 319
K L+ L N++++G +++ FP L P + +K+ + + F+ ++
Sbjct: 178 K---LMESLHENVELLGTPWLQVYNNFPALLDYFPGI--HKTLLKNADYIKNFIMEKVKE 232
Query: 320 HKETFNPDEMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTTTL---PSRH 376
H++ + + RD +D +L ++ E+ + ES ++A+ D+F AG+ETT+T
Sbjct: 233 HQKLLDVNNPRDFIDCFLIKMEQENNLEFTLESLVIAVS-DLFGAGTETTSTTLRYSLLL 291
Query: 377 VNSHDMIVCFY-------LNRYLTSSMYTRSRRSLVQTLPYLEAITYESVRVFMGRTFSI 429
+ H + + R+ + M RSR +PY +A+ +E R ++
Sbjct: 292 LLKHPEVAARVQEEIERVIGRHRSPCMQDRSR------MPYTDAVIHEIQRFIDLLPTNL 345
Query: 430 PHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYL 489
PH RD + YFIPK T II + VL D++ + +P+VF P FL++ G + D ++
Sbjct: 346 PHAVTRDVRFRNYFIPKGTDIITSLTSVLHDEKAFPNPKVFDPGHFLDESGNFKKSDYFM 405
Query: 490 PFGAGPDRLLVTDEQLWVEQRRFVLRQLREF 520
PF AG R+ V + +E F+ L+ F
Sbjct: 406 PFSAG-KRMCVGEGLARMELFLFLTSILQNF 435
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 99/316 (31%), Positives = 173/316 (54%), Gaps = 12/316 (3%)
Query: 510 RRFVLRQLREFGFGKRTMAQLVEEEAYQLVQLFKQEVQDGGAIIPMRDAFSVPVLNTLWS 569
RRF + LR+FG GKR + + ++EEA L+ + GGA I S V N + S
Sbjct: 106 RRFSIATLRDFGVGKRGIEERIQEEAGFLIDALRGT---GGANIDPTFFLSRTVSNVISS 162
Query: 570 MLAGIRYSPEDKELKKIQSLLTELFA-NIDMVGALFSQFP-ILRYV-APEMSGYKSFVSI 626
++ G R+ +DKE + ++ +F G L+ F +++++ P+ ++ +
Sbjct: 163 IVFGDRFDYKDKEFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQ----L 218
Query: 627 HQKVWKFLRNELDNHKETFNPDEMRDIMDVYLKTLKSEDKTDT--FSESQLLAICMDMFM 684
Q + F+ ++++++ T +P+ RD +D +L ++ E+K F L+ +++F+
Sbjct: 219 LQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFI 278
Query: 685 AGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYESV 744
G+ET S +L +GFL L+ HP+V+ K EIDRV+G++R P DR MPY+EA+ +E
Sbjct: 279 GGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQ 338
Query: 745 RVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDK 804
R S+ R +DT + +F+PK T + VL D F+ +P+ F P+ FLN+K
Sbjct: 339 RFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEK 398
Query: 805 GAIQVPDQYLPFGAGR 820
G + D ++PF G+
Sbjct: 399 GQFKKSDAFVPFSIGK 414
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 115/489 (23%), Positives = 210/489 (42%), Gaps = 101/489 (20%)
Query: 27 TKKPRNFPPGPDWIPILGSALAIQKLRNQTGYLYQACAELSKQYGPVVGLRVGKDRQVVC 86
T PPGP +P +G+ L + T +Y + ++S++YGPV + +G R VV
Sbjct: 5 TSSKGKLPPGPTPLPFIGNYLQLN-----TEQMYNSLMKISERYGPVFTIHLGPRRVVVL 59
Query: 87 FGYPAIKEML--SKEEFDGRPRGPFYETRTWGKRQGLMEGTVTAKVLSSLKRREKEDRIG 144
G+ A++E L EEF GR G
Sbjct: 60 CGHDAVREALVDQAEEFSGR---------------------------------------G 80
Query: 145 ESQPFRERAGIKPVTALGYKVDVLLSKAGLLVTDEQLWVEQRRFVLRQLREFGFGKRTMA 204
E F D + G++ ++ + + RRF + LR+FG GKR +
Sbjct: 81 EQATF----------------DWVFKGYGVVFSNGERAKQLRRFSIATLRDFGVGKRGIE 124
Query: 205 QLVEEEAYQLVQLFKQEVQHLSLPGAIIPMRDAFSVPVLNTLWSMLAGIRYSPEDKELKK 264
+ ++EEA L+ + GA I S V N + S++ G R+ +DKE
Sbjct: 125 ERIQEEAGFLIDALR------GTGGANIDPTFFLSRTVSNVISSIVFGDRFDYKDKEFLS 178
Query: 265 IQSLLTELFA-NIDMVGALFSQFP-ILRYV-APEMSGYKSFVSIHQKVWKFLRNELDNHK 321
+ ++ +F G L+ F +++++ P+ ++ + Q + F+ ++++++
Sbjct: 179 LLRMMLGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQ----LLQGLEDFIAKKVEHNQ 234
Query: 322 ETFNPDEMRDIMDVYLKTLKSEDKTDT--FSESQLLAICMDMFMAGSETTTTL------- 372
T +P+ RD +D +L ++ E+K F L+ +++F+ G+ET +T
Sbjct: 235 RTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFIGGTETVSTTLRYGFLL 294
Query: 373 ----PSRHVNSHDMIVCFYLNRYLTSSMYTRSRRSLVQ---TLPYLEAITYESVRVFMGR 425
P H+ I + ++R+ + +PY+EA+ +E R
Sbjct: 295 LMKHPEVEAKVHEEI----------DRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVI 344
Query: 426 TFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVP 485
S+ R +DT + +F+PK T + VL D F+ +P+ F P+ FLN+KG +
Sbjct: 345 PMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKS 404
Query: 486 DQYLPFGAG 494
D ++PF G
Sbjct: 405 DAFVPFSIG 413
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 172 bits (437), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 99/316 (31%), Positives = 171/316 (54%), Gaps = 12/316 (3%)
Query: 510 RRFVLRQLREFGFGKRTMAQLVEEEAYQLVQLFKQEVQDGGAIIPMRDAFSVPVLNTLWS 569
RRF + LR+FG GKR + + ++EEA L+ + GGA I S V N + S
Sbjct: 106 RRFSIATLRDFGVGKRGIEERIQEEAGFLIDALRGT---GGANIDPTFFLSRTVSNVISS 162
Query: 570 MLAGIRYSPEDKELKKIQSLLTELFANIDM-VGALFSQFP-ILRYV-APEMSGYKSFVSI 626
++ G R+ +DKE + ++ +F G L+ F +++++ P+ ++
Sbjct: 163 IVFGDRFDYKDKEFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQCL--- 219
Query: 627 HQKVWKFLRNELDNHKETFNPDEMRDIMDVYLKTLKSEDKTDT--FSESQLLAICMDMFM 684
Q + F+ ++++++ T +P+ RD +D +L ++ E+K F L+ + +F+
Sbjct: 220 -QGLEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQLFI 278
Query: 685 AGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYESV 744
G+ET S +L +GFL L+ HP+V+ K EIDRV+G++R P DR MPY+EA+ +E
Sbjct: 279 GGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQ 338
Query: 745 RVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDK 804
R S+ R +DT + +F+PK T + VL D F+ +P+ F P+ FLN+K
Sbjct: 339 RFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEK 398
Query: 805 GAIQVPDQYLPFGAGR 820
G + D ++PF G+
Sbjct: 399 GQFKKSDAFVPFSIGK 414
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 115/489 (23%), Positives = 208/489 (42%), Gaps = 101/489 (20%)
Query: 27 TKKPRNFPPGPDWIPILGSALAIQKLRNQTGYLYQACAELSKQYGPVVGLRVGKDRQVVC 86
T PPGP +P +G+ L + T +Y + ++S++YGPV + +G R VV
Sbjct: 5 TSSKGKLPPGPTPLPFIGNYLQLN-----TEQMYNSLMKISERYGPVFTIHLGPRRVVVL 59
Query: 87 FGYPAIKEML--SKEEFDGRPRGPFYETRTWGKRQGLMEGTVTAKVLSSLKRREKEDRIG 144
G+ A++E L EEF GR G
Sbjct: 60 CGHDAVREALVDQAEEFSGR---------------------------------------G 80
Query: 145 ESQPFRERAGIKPVTALGYKVDVLLSKAGLLVTDEQLWVEQRRFVLRQLREFGFGKRTMA 204
E F D + G++ ++ + + RRF + LR+FG GKR +
Sbjct: 81 EQATF----------------DWVFKGYGVVFSNGERAKQLRRFSIATLRDFGVGKRGIE 124
Query: 205 QLVEEEAYQLVQLFKQEVQHLSLPGAIIPMRDAFSVPVLNTLWSMLAGIRYSPEDKELKK 264
+ ++EEA L+ + GA I S V N + S++ G R+ +DKE
Sbjct: 125 ERIQEEAGFLIDALR------GTGGANIDPTFFLSRTVSNVISSIVFGDRFDYKDKEFLS 178
Query: 265 IQSLLTELFANIDM-VGALFSQFP-ILRYV-APEMSGYKSFVSIHQKVWKFLRNELDNHK 321
+ ++ +F G L+ F +++++ P+ ++ Q + F+ ++++++
Sbjct: 179 LLRMMLGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQCL----QGLEDFIAKKVEHNQ 234
Query: 322 ETFNPDEMRDIMDVYLKTLKSEDKTDT--FSESQLLAICMDMFMAGSETTTTL------- 372
T +P+ RD +D +L ++ E+K F L+ + +F+ G+ET +T
Sbjct: 235 RTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQLFIGGTETVSTTLRYGFLL 294
Query: 373 ----PSRHVNSHDMIVCFYLNRYLTSSMYTRSRRSLVQ---TLPYLEAITYESVRVFMGR 425
P H+ I + ++R+ + +PY+EA+ +E R
Sbjct: 295 LMKHPEVEAKVHEEI----------DRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVI 344
Query: 426 TFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVP 485
S+ R +DT + +F+PK T + VL D F+ +P+ F P+ FLN+KG +
Sbjct: 345 PMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKS 404
Query: 486 DQYLPFGAG 494
D ++PF G
Sbjct: 405 DAFVPFSIG 413
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 172 bits (436), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 99/316 (31%), Positives = 172/316 (54%), Gaps = 12/316 (3%)
Query: 510 RRFVLRQLREFGFGKRTMAQLVEEEAYQLVQLFKQEVQDGGAIIPMRDAFSVPVLNTLWS 569
RRF + LR+FG GKR + + ++EEA L+ + GGA I S V N + S
Sbjct: 106 RRFSIATLRDFGVGKRGIEERIQEEAGFLIDALRGT---GGANIDPTFFLSRTVSNVISS 162
Query: 570 MLAGIRYSPEDKELKKIQSLLTELFA-NIDMVGALFSQFP-ILRYV-APEMSGYKSFVSI 626
++ G R+ +DKE + ++ +F G L+ F +++++ P+ ++ +
Sbjct: 163 IVFGDRFDYKDKEFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQ----L 218
Query: 627 HQKVWKFLRNELDNHKETFNPDEMRDIMDVYLKTLKSEDKTDT--FSESQLLAICMDMFM 684
Q + F+ ++++++ T +P+ RD +D +L ++ E+K F L+ + +F+
Sbjct: 219 LQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQLFI 278
Query: 685 AGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYESV 744
G+ET S +L +GFL L+ HP+V+ K EIDRV+G++R P DR MPY+EA+ +E
Sbjct: 279 GGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQ 338
Query: 745 RVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDK 804
R S+ R +DT + +F+PK T + VL D F+ +P+ F P+ FLN+K
Sbjct: 339 RFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEK 398
Query: 805 GAIQVPDQYLPFGAGR 820
G + D ++PF G+
Sbjct: 399 GQFKKSDAFVPFSIGK 414
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 115/489 (23%), Positives = 209/489 (42%), Gaps = 101/489 (20%)
Query: 27 TKKPRNFPPGPDWIPILGSALAIQKLRNQTGYLYQACAELSKQYGPVVGLRVGKDRQVVC 86
T PPGP +P +G+ L + T +Y + ++S++YGPV + +G R VV
Sbjct: 5 TSSKGKLPPGPTPLPFIGNYLQLN-----TEQMYNSLMKISERYGPVFTIHLGPRRVVVL 59
Query: 87 FGYPAIKEML--SKEEFDGRPRGPFYETRTWGKRQGLMEGTVTAKVLSSLKRREKEDRIG 144
G+ A++E L EEF GR G
Sbjct: 60 CGHDAVREALVDQAEEFSGR---------------------------------------G 80
Query: 145 ESQPFRERAGIKPVTALGYKVDVLLSKAGLLVTDEQLWVEQRRFVLRQLREFGFGKRTMA 204
E F D + G++ ++ + + RRF + LR+FG GKR +
Sbjct: 81 EQATF----------------DWVFKGYGVVFSNGERAKQLRRFSIATLRDFGVGKRGIE 124
Query: 205 QLVEEEAYQLVQLFKQEVQHLSLPGAIIPMRDAFSVPVLNTLWSMLAGIRYSPEDKELKK 264
+ ++EEA L+ + GA I S V N + S++ G R+ +DKE
Sbjct: 125 ERIQEEAGFLIDALR------GTGGANIDPTFFLSRTVSNVISSIVFGDRFDYKDKEFLS 178
Query: 265 IQSLLTELFA-NIDMVGALFSQFP-ILRYV-APEMSGYKSFVSIHQKVWKFLRNELDNHK 321
+ ++ +F G L+ F +++++ P+ ++ + Q + F+ ++++++
Sbjct: 179 LLRMMLGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQ----LLQGLEDFIAKKVEHNQ 234
Query: 322 ETFNPDEMRDIMDVYLKTLKSEDKTDT--FSESQLLAICMDMFMAGSETTTTL------- 372
T +P+ RD +D +L ++ E+K F L+ + +F+ G+ET +T
Sbjct: 235 RTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQLFIGGTETVSTTLRYGFLL 294
Query: 373 ----PSRHVNSHDMIVCFYLNRYLTSSMYTRSRRSLVQ---TLPYLEAITYESVRVFMGR 425
P H+ I + ++R+ + +PY+EA+ +E R
Sbjct: 295 LMKHPEVEAKVHEEI----------DRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVI 344
Query: 426 TFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVP 485
S+ R +DT + +F+PK T + VL D F+ +P+ F P+ FLN+KG +
Sbjct: 345 PMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKS 404
Query: 486 DQYLPFGAG 494
D ++PF G
Sbjct: 405 DAFVPFSIG 413
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 172 bits (435), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 99/316 (31%), Positives = 172/316 (54%), Gaps = 12/316 (3%)
Query: 510 RRFVLRQLREFGFGKRTMAQLVEEEAYQLVQLFKQEVQDGGAIIPMRDAFSVPVLNTLWS 569
RRF + LR+FG GKR + + ++EEA L+ + GGA I S V N + S
Sbjct: 106 RRFSIATLRDFGVGKRGIEERIQEEAGFLIDALRGT---GGANIDPTFFLSRTVSNVISS 162
Query: 570 MLAGIRYSPEDKELKKIQSLLTELFANIDM-VGALFSQFP-ILRYV-APEMSGYKSFVSI 626
++ G R+ +DKE + ++ +F G L+ F +++++ P+ ++ +
Sbjct: 163 IVFGDRFDYKDKEFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQ----L 218
Query: 627 HQKVWKFLRNELDNHKETFNPDEMRDIMDVYLKTLKSEDKTDT--FSESQLLAICMDMFM 684
Q + F+ ++++++ T +P+ RD +D +L ++ E+K F L+ + +F+
Sbjct: 219 LQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQLFV 278
Query: 685 AGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYESV 744
G+ET S +L +GFL L+ HP+V+ K EIDRV+G++R P DR MPY+EA+ +E
Sbjct: 279 GGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQ 338
Query: 745 RVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDK 804
R S+ R +DT + +F+PK T + VL D F+ +P+ F P+ FLN+K
Sbjct: 339 RFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEK 398
Query: 805 GAIQVPDQYLPFGAGR 820
G + D ++PF G+
Sbjct: 399 GQFKKSDAFVPFSIGK 414
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 115/489 (23%), Positives = 209/489 (42%), Gaps = 101/489 (20%)
Query: 27 TKKPRNFPPGPDWIPILGSALAIQKLRNQTGYLYQACAELSKQYGPVVGLRVGKDRQVVC 86
T PPGP +P +G+ L + T +Y + ++S++YGPV + +G R VV
Sbjct: 5 TSSKGKLPPGPTPLPFIGNYLQLN-----TEQMYNSLMKISERYGPVFTIHLGPRRVVVL 59
Query: 87 FGYPAIKEML--SKEEFDGRPRGPFYETRTWGKRQGLMEGTVTAKVLSSLKRREKEDRIG 144
G+ A++E L EEF GR G
Sbjct: 60 CGHDAVREALVDQAEEFSGR---------------------------------------G 80
Query: 145 ESQPFRERAGIKPVTALGYKVDVLLSKAGLLVTDEQLWVEQRRFVLRQLREFGFGKRTMA 204
E F D + G++ ++ + + RRF + LR+FG GKR +
Sbjct: 81 EQATF----------------DWVFKGYGVVFSNGERAKQLRRFSIATLRDFGVGKRGIE 124
Query: 205 QLVEEEAYQLVQLFKQEVQHLSLPGAIIPMRDAFSVPVLNTLWSMLAGIRYSPEDKELKK 264
+ ++EEA L+ + GA I S V N + S++ G R+ +DKE
Sbjct: 125 ERIQEEAGFLIDALR------GTGGANIDPTFFLSRTVSNVISSIVFGDRFDYKDKEFLS 178
Query: 265 IQSLLTELFANIDM-VGALFSQFP-ILRYV-APEMSGYKSFVSIHQKVWKFLRNELDNHK 321
+ ++ +F G L+ F +++++ P+ ++ + Q + F+ ++++++
Sbjct: 179 LLRMMLGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQ----LLQGLEDFIAKKVEHNQ 234
Query: 322 ETFNPDEMRDIMDVYLKTLKSEDKTDT--FSESQLLAICMDMFMAGSETTTTL------- 372
T +P+ RD +D +L ++ E+K F L+ + +F+ G+ET +T
Sbjct: 235 RTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQLFVGGTETVSTTLRYGFLL 294
Query: 373 ----PSRHVNSHDMIVCFYLNRYLTSSMYTRSRRSLVQ---TLPYLEAITYESVRVFMGR 425
P H+ I + ++R+ + +PY+EA+ +E R
Sbjct: 295 LMKHPEVEAKVHEEI----------DRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVI 344
Query: 426 TFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVP 485
S+ R +DT + +F+PK T + VL D F+ +P+ F P+ FLN+KG +
Sbjct: 345 PMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKS 404
Query: 486 DQYLPFGAG 494
D ++PF G
Sbjct: 405 DAFVPFSIG 413
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 100/316 (31%), Positives = 172/316 (54%), Gaps = 12/316 (3%)
Query: 510 RRFVLRQLREFGFGKRTMAQLVEEEAYQLVQLFKQEVQDGGAIIPMRDAFSVPVLNTLWS 569
RRF + LR+FG GKR + + ++EEA L+ + GGA I S V N + S
Sbjct: 106 RRFSIATLRDFGVGKRGIEERIQEEAGFLIDALRGT---GGANIDPTFFLSRTVSNVISS 162
Query: 570 MLAGIRYSPEDKE-LKKIQSLLTELFANIDMVGALFSQFP-ILRYV-APEMSGYKSFVSI 626
++ G R+ +DKE L ++ +L G L+ F +++++ P+ ++ +
Sbjct: 163 IVFGDRFDYKDKEFLSLLRMMLGSFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQ----L 218
Query: 627 HQKVWKFLRNELDNHKETFNPDEMRDIMDVYLKTLKSEDKTDT--FSESQLLAICMDMFM 684
Q + F+ ++++++ T +P+ RD +D +L ++ E+K F L+ +++F
Sbjct: 219 LQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFF 278
Query: 685 AGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYESV 744
AG+ET S +L +GFL L+ HP+V+ K EIDRV+G++R P DR MPY+EA+ +E
Sbjct: 279 AGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQ 338
Query: 745 RVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDK 804
R + R +DT + +F+PK T + VL D F+ +P+ F P+ FLN+K
Sbjct: 339 RFGDVIPMGLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEK 398
Query: 805 GAIQVPDQYLPFGAGR 820
G + D ++PF G+
Sbjct: 399 GQFKKSDAFVPFSIGK 414
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 116/489 (23%), Positives = 209/489 (42%), Gaps = 101/489 (20%)
Query: 27 TKKPRNFPPGPDWIPILGSALAIQKLRNQTGYLYQACAELSKQYGPVVGLRVGKDRQVVC 86
T PPGP +P +G+ L + T +Y + ++S++YGPV + +G R VV
Sbjct: 5 TSSKGKLPPGPTPLPFIGNYLQLN-----TEQMYNSLMKISERYGPVFTIHLGPRRVVVL 59
Query: 87 FGYPAIKEML--SKEEFDGRPRGPFYETRTWGKRQGLMEGTVTAKVLSSLKRREKEDRIG 144
G+ A++E L EEF GR G
Sbjct: 60 CGHDAVREALVDQAEEFSGR---------------------------------------G 80
Query: 145 ESQPFRERAGIKPVTALGYKVDVLLSKAGLLVTDEQLWVEQRRFVLRQLREFGFGKRTMA 204
E F D + G++ ++ + + RRF + LR+FG GKR +
Sbjct: 81 EQATF----------------DWVFKGYGVVFSNGERAKQLRRFSIATLRDFGVGKRGIE 124
Query: 205 QLVEEEAYQLVQLFKQEVQHLSLPGAIIPMRDAFSVPVLNTLWSMLAGIRYSPEDKE-LK 263
+ ++EEA L+ + GA I S V N + S++ G R+ +DKE L
Sbjct: 125 ERIQEEAGFLIDALR------GTGGANIDPTFFLSRTVSNVISSIVFGDRFDYKDKEFLS 178
Query: 264 KIQSLLTELFANIDMVGALFSQFP-ILRYV-APEMSGYKSFVSIHQKVWKFLRNELDNHK 321
++ +L G L+ F +++++ P+ ++ + Q + F+ ++++++
Sbjct: 179 LLRMMLGSFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQ----LLQGLEDFIAKKVEHNQ 234
Query: 322 ETFNPDEMRDIMDVYLKTLKSEDKTDT--FSESQLLAICMDMFMAGSETTTTL------- 372
T +P+ RD +D +L ++ E+K F L+ +++F AG+ET +T
Sbjct: 235 RTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFFAGTETVSTTLRYGFLL 294
Query: 373 ----PSRHVNSHDMIVCFYLNRYLTSSMYTRSRRSLVQ---TLPYLEAITYESVRVFMGR 425
P H+ I + ++R+ + +PY+EA+ +E R
Sbjct: 295 LMKHPEVEAKVHEEI----------DRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVI 344
Query: 426 TFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVP 485
+ R +DT + +F+PK T + VL D F+ +P+ F P+ FLN+KG +
Sbjct: 345 PMGLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKS 404
Query: 486 DQYLPFGAG 494
D ++PF G
Sbjct: 405 DAFVPFSIG 413
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/319 (32%), Positives = 161/319 (50%), Gaps = 10/319 (3%)
Query: 506 WVEQRRFVLRQLREFGFGKRTMAQLVEEEAYQLVQLFKQEVQDGGAIIPMRDAFSVPVLN 565
W EQRRF + LR G GK+++ Q V EEA L F G P V N
Sbjct: 106 WREQRRFSVSTLRNLGLGKKSLEQWVTEEAACLCAAFAN--HSGRPFRP-NGLLDKAVSN 162
Query: 566 TLWSMLAGIRYSPEDKELKKIQSLLTE-LFANIDMVGALFSQFPILRYVAPEMSGYKSFV 624
+ S+ G R+ +D ++ L E L + + + P+L ++ P ++G +
Sbjct: 163 VIASLTCGRRFEYDDPRFLRLLDLAQEGLKEESGFLREVLNAVPVLLHI-PALAG--KVL 219
Query: 625 SIHQKVWKFLRNELDNHKETFNPDEM-RDIMDVYLKTLKSE--DKTDTFSESQLLAICMD 681
+ L L H+ T++P + RD+ + +L ++ + +F++ L + D
Sbjct: 220 RFQKAFLTQLDELLTEHRMTWDPAQPPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVAD 279
Query: 682 MFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITY 741
+F AG TTS +L +G L ++LHPDVQ++ Q EID V+G+ R P + D+ HMPY A+ +
Sbjct: 280 LFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEMGDQAHMPYTTAVIH 339
Query: 742 ESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERFL 801
E R + H RD +QG+ IPK T +I N + VL D+ W P F PE FL
Sbjct: 340 EVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFL 399
Query: 802 NDKGAIQVPDQYLPFGAGR 820
+ +G P+ +LPF AGR
Sbjct: 400 DAQGHFVKPEAFLPFSAGR 418
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 143/323 (44%), Gaps = 21/323 (6%)
Query: 182 WVEQRRFVLRQLREFGFGKRTMAQLVEEEAYQLVQLFKQEVQHLSLPGAIIPMRDAFSVP 241
W EQRRF + LR G GK+++ Q V EEA L F P ++
Sbjct: 106 WREQRRFSVSTLRNLGLGKKSLEQWVTEEAACLCAAFANHSGRPFRPNGLL------DKA 159
Query: 242 VLNTLWSMLAGIRYSPEDKELKKIQSLLTE-LFANIDMVGALFSQFPILRYVAPEMSGYK 300
V N + S+ G R+ +D ++ L E L + + + P+L ++ P ++G
Sbjct: 160 VSNVIASLTCGRRFEYDDPRFLRLLDLAQEGLKEESGFLREVLNAVPVLLHI-PALAG-- 216
Query: 301 SFVSIHQKVWKFLRNELDNHKETFNPDEM-RDIMDVYLKTLKSE--DKTDTFSESQLLAI 357
+ + L L H+ T++P + RD+ + +L ++ + +F++ L +
Sbjct: 217 KVLRFQKAFLTQLDELLTEHRMTWDPAQPPRDLTEAFLAEMEKAKGNPESSFNDENLRIV 276
Query: 358 CMDMFMAGSETTTTLPSRHVNSHDMIVCFYLNRYLTSSM------YTRSRRSLVQTLPYL 411
D+F AG TT+T + + MI+ + R + + R +PY
Sbjct: 277 VADLFSAGMVTTSTTLAWGLLL--MILHPDVQRRVQQEIDDVIGQVRRPEMGDQAHMPYT 334
Query: 412 EAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFR 471
A+ +E R + H RD +QG+ IPK T +I N + VL D+ W P F
Sbjct: 335 TAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFH 394
Query: 472 PERFLNDKGAIQVPDQYLPFGAG 494
PE FL+ +G P+ +LPF AG
Sbjct: 395 PEHFLDAQGHFVKPEAFLPFSAG 417
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/351 (30%), Positives = 182/351 (51%), Gaps = 18/351 (5%)
Query: 476 LNDKGAIQVPDQYLPFGAGPDRLLVTDEQLWVEQRRFVLRQLREFGFGKRTMAQLVEEEA 535
+ +G I V D P G + E+ W RRF L +R+FG GKR++ + ++EEA
Sbjct: 76 FSGRGKIAVVD---PIFQGYGVIFANGER-WRALRRFSLATMRDFGMGKRSVEERIQEEA 131
Query: 536 YQLVQLFKQEVQDGGAIIPMRDAFSVPVLNTLWSMLAGIRYSPEDKELKKIQSLLTELFA 595
LV+ ++ GA++ F N + S++ G R+ +D ++ L + F+
Sbjct: 132 RCLVEELRKS---KGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFFQSFS 188
Query: 596 NIDM----VGALFSQFPILRYVAPEMSGYKSFVSIHQKVWKFLRNELDNHKETFNPDEMR 651
I V LFS F L+Y ++ Q++ F+ ++ H+ T +P R
Sbjct: 189 LISSFSSQVFELFSGF--LKYFP---GTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPR 243
Query: 652 DIMDVYLKTLKSE--DKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQK 709
D +DVYL ++ + D + F L+ + +F AG+ETTS +L +GFL +L +P V +
Sbjct: 244 DFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTE 303
Query: 710 KAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFI 769
+ Q EI++V+G R P+L+DR MPY +A+ +E R+ F +PH +DT +GY I
Sbjct: 304 RVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVI 363
Query: 770 PKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAGR 820
PK+T + + L D ++ P F P FL+ GA++ + ++PF G+
Sbjct: 364 PKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGK 414
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 113/484 (23%), Positives = 202/484 (41%), Gaps = 91/484 (18%)
Query: 27 TKKPRNFPPGPDWIPILGSALAIQKLRNQTGYLYQACAELSKQYGPVVGLRVGKDRQVVC 86
T PPGP +P+LG+ L + + L ++ L ++YG V + +G VV
Sbjct: 5 TSSKGKLPPGPSPLPVLGNLLQMDR-----KGLLRSFLRLREKYGDVFTVYLGSRPVVVL 59
Query: 87 FGYPAIKEMLSKEEFDGRPRGPFYETRTWGKRQGLMEGTVTAKVLSSLKRREKEDRIGES 146
G AI+E L + ++
Sbjct: 60 CGTDAIREAL----------------------------------------------VDQA 73
Query: 147 QPFRERAGIKPVTALGYKVDVLLSKAGLLVTDEQLWVEQRRFVLRQLREFGFGKRTMAQL 206
+ F R I VD + G++ + + W RRF L +R+FG GKR++ +
Sbjct: 74 EAFSGRGKIA-------VVDPIFQGYGVIFANGERWRALRRFSLATMRDFGMGKRSVEER 126
Query: 207 VEEEAYQLVQLFKQEVQHLSLPGAIIPMRDAFSVPVLNTLWSMLAGIRYSPEDKELKKIQ 266
++EEA LV+ ++ GA++ F N + S++ G R+ +D ++
Sbjct: 127 IQEEARCLVEELRKS------KGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLL 180
Query: 267 SL----LTELFANIDMVGALFSQFPILRYVAPEMSGYKSFVSIHQKVWKFLRNELDNHKE 322
L + + + V LFS F L+Y ++ Q++ F+ ++ H+
Sbjct: 181 DLFFQSFSLISSFSSQVFELFSGF--LKYFP---GTHRQIYRNLQEINTFIGQSVEKHRA 235
Query: 323 TFNPDEMRDIMDVYLKTLKSE--DKTDTFSESQLLAICMDMFMAGSETTTT--------- 371
T +P RD +DVYL ++ + D + F L+ + +F AG+ETT+T
Sbjct: 236 TLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLM 295
Query: 372 LPSRHVNSH-DMIVCFYLNRYLTSSMYTRSRRSLVQTLPYLEAITYESVRVFMGRTFSIP 430
L HV + + + ++ R++ +PY +A+ +E R+ F +P
Sbjct: 296 LKYPHVTERVQKEIEQVIGSHRPPALDDRAK------MPYTDAVIHEIQRLGDLIPFGVP 349
Query: 431 HRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLP 490
H +DT +GY IPK+T + + L D ++ P F P FL+ GA++ + ++P
Sbjct: 350 HTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEGFMP 409
Query: 491 FGAG 494
F G
Sbjct: 410 FSLG 413
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/358 (30%), Positives = 182/358 (50%), Gaps = 32/358 (8%)
Query: 476 LNDKGAIQVPDQYLPFGAGPDRLLVTDEQLWVEQRRFVLRQLREFGFGKRTMAQLVEEEA 535
+ +G I V D P G + E+ W RRF L +R+FG GKR++ + ++EEA
Sbjct: 76 FSGRGKIAVVD---PIFQGYGVIFANGER-WRALRRFSLATMRDFGMGKRSVEERIQEEA 131
Query: 536 YQLVQLFKQEVQDGGAIIPMRDAFSVPVLNTLWSMLAGIRYSPEDKELKKIQSLLTELFA 595
LV+ ++ GA++ F N + S++ G R+ +D ++ L + F+
Sbjct: 132 RCLVEELRKS---KGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFFQSFS 188
Query: 596 NID----MVGALFSQFPILRYVAPEMSGYKSFVSIHQKVWK-------FLRNELDNHKET 644
I V LFS F K F H+++++ F+ ++ H+ T
Sbjct: 189 LISSFSSQVFELFSGF------------LKHFPGTHRQIYRNLQEINTFIGQSVEKHRAT 236
Query: 645 FNPDEMRDIMDVYLKTLKSE--DKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLL 702
+P RD +DVYL ++ + D + F L+ + +F AG+ETTS +L +GFL +L
Sbjct: 237 LDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLML 296
Query: 703 LHPDVQKKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDT 762
+P V ++ Q EI++V+G R P+L+DR MPY +A+ +E R+ F +PH +DT
Sbjct: 297 KYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDT 356
Query: 763 TLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAGR 820
+GY IPK+T + + L D ++ P F P FL+ GA++ + ++PF G+
Sbjct: 357 QFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGK 414
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 113/491 (23%), Positives = 202/491 (41%), Gaps = 105/491 (21%)
Query: 27 TKKPRNFPPGPDWIPILGSALAIQKLRNQTGYLYQACAELSKQYGPVVGLRVGKDRQVVC 86
T PPGP +P+LG+ L + + L ++ L ++YG V + +G VV
Sbjct: 5 TSSKGKLPPGPSPLPVLGNLLQMDR-----KGLLRSFLRLREKYGDVFTVYLGSRPVVVL 59
Query: 87 FGYPAIKEMLSKEEFDGRPRGPFYETRTWGKRQGLMEGTVTAKVLSSLKRREKEDRIGES 146
G AI+E L + ++
Sbjct: 60 CGTDAIREAL----------------------------------------------VDQA 73
Query: 147 QPFRERAGIKPVTALGYKVDVLLSKAGLLVTDEQLWVEQRRFVLRQLREFGFGKRTMAQL 206
+ F R I VD + G++ + + W RRF L +R+FG GKR++ +
Sbjct: 74 EAFSGRGKIA-------VVDPIFQGYGVIFANGERWRALRRFSLATMRDFGMGKRSVEER 126
Query: 207 VEEEAYQLVQLFKQEVQHLSLPGAIIPMRDAFSVPVLNTLWSMLAGIRYSPEDKELKKIQ 266
++EEA LV+ ++ GA++ F N + S++ G R+ +D ++
Sbjct: 127 IQEEARCLVEELRKS------KGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLL 180
Query: 267 SL----LTELFANIDMVGALFSQFPILRYVAPEMSGYKSFVSIHQKVWK-------FLRN 315
L + + + V LFS F K F H+++++ F+
Sbjct: 181 DLFFQSFSLISSFSSQVFELFSGF------------LKHFPGTHRQIYRNLQEINTFIGQ 228
Query: 316 ELDNHKETFNPDEMRDIMDVYLKTLKSE--DKTDTFSESQLLAICMDMFMAGSETTTT-- 371
++ H+ T +P RD +DVYL ++ + D + F L+ + +F AG+ETT+T
Sbjct: 229 SVEKHRATLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTL 288
Query: 372 -------LPSRHVNSH-DMIVCFYLNRYLTSSMYTRSRRSLVQTLPYLEAITYESVRVFM 423
L HV + + + ++ R++ +PY +A+ +E R+
Sbjct: 289 RYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAK------MPYTDAVIHEIQRLGD 342
Query: 424 GRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQ 483
F +PH +DT +GY IPK+T + + L D ++ P F P FL+ GA++
Sbjct: 343 LIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALK 402
Query: 484 VPDQYLPFGAG 494
+ ++PF G
Sbjct: 403 RNEGFMPFSLG 413
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/351 (30%), Positives = 182/351 (51%), Gaps = 18/351 (5%)
Query: 476 LNDKGAIQVPDQYLPFGAGPDRLLVTDEQLWVEQRRFVLRQLREFGFGKRTMAQLVEEEA 535
+ +G I V D P G + E+ W RRF L +R+FG GKR++ + ++EEA
Sbjct: 76 FSGRGKIAVVD---PIFQGYGVIFANGER-WRALRRFSLATMRDFGMGKRSVEERIQEEA 131
Query: 536 YQLVQLFKQEVQDGGAIIPMRDAFSVPVLNTLWSMLAGIRYSPEDKELKKIQSLLTELFA 595
LV+ ++ GA++ F N + S++ G R+ +D ++ L + F+
Sbjct: 132 RCLVEELRKS---KGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFFQSFS 188
Query: 596 NIDM----VGALFSQFPILRYVAPEMSGYKSFVSIHQKVWKFLRNELDNHKETFNPDEMR 651
I V LFS F L+Y ++ Q++ F+ ++ H+ T +P R
Sbjct: 189 LISSFSSQVFELFSGF--LKYFP---GTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPR 243
Query: 652 DIMDVYLKTLKSE--DKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQK 709
D +DVYL ++ + D + F L+ + +F AG+ETTS +L +GFL +L +P V +
Sbjct: 244 DFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFAAGTETTSTTLRYGFLLMLKYPHVTE 303
Query: 710 KAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFI 769
+ Q EI++V+G R P+L+DR MPY +A+ +E R+ F +PH +DT +GY I
Sbjct: 304 RVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVI 363
Query: 770 PKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAGR 820
PK+T + + L D ++ P F P FL+ GA++ + ++PF G+
Sbjct: 364 PKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGK 414
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 113/484 (23%), Positives = 202/484 (41%), Gaps = 91/484 (18%)
Query: 27 TKKPRNFPPGPDWIPILGSALAIQKLRNQTGYLYQACAELSKQYGPVVGLRVGKDRQVVC 86
T PPGP +P+LG+ L + + L ++ L ++YG V + +G VV
Sbjct: 5 TSSKGKLPPGPSPLPVLGNLLQMDR-----KGLLRSFLRLREKYGDVFTVYLGSRPVVVL 59
Query: 87 FGYPAIKEMLSKEEFDGRPRGPFYETRTWGKRQGLMEGTVTAKVLSSLKRREKEDRIGES 146
G AI+E L + ++
Sbjct: 60 CGTDAIREAL----------------------------------------------VDQA 73
Query: 147 QPFRERAGIKPVTALGYKVDVLLSKAGLLVTDEQLWVEQRRFVLRQLREFGFGKRTMAQL 206
+ F R I VD + G++ + + W RRF L +R+FG GKR++ +
Sbjct: 74 EAFSGRGKIA-------VVDPIFQGYGVIFANGERWRALRRFSLATMRDFGMGKRSVEER 126
Query: 207 VEEEAYQLVQLFKQEVQHLSLPGAIIPMRDAFSVPVLNTLWSMLAGIRYSPEDKELKKIQ 266
++EEA LV+ ++ GA++ F N + S++ G R+ +D ++
Sbjct: 127 IQEEARCLVEELRKS------KGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLL 180
Query: 267 SL----LTELFANIDMVGALFSQFPILRYVAPEMSGYKSFVSIHQKVWKFLRNELDNHKE 322
L + + + V LFS F L+Y ++ Q++ F+ ++ H+
Sbjct: 181 DLFFQSFSLISSFSSQVFELFSGF--LKYFP---GTHRQIYRNLQEINTFIGQSVEKHRA 235
Query: 323 TFNPDEMRDIMDVYLKTLKSE--DKTDTFSESQLLAICMDMFMAGSETTTT--------- 371
T +P RD +DVYL ++ + D + F L+ + +F AG+ETT+T
Sbjct: 236 TLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFAAGTETTSTTLRYGFLLM 295
Query: 372 LPSRHVNSH-DMIVCFYLNRYLTSSMYTRSRRSLVQTLPYLEAITYESVRVFMGRTFSIP 430
L HV + + + ++ R++ +PY +A+ +E R+ F +P
Sbjct: 296 LKYPHVTERVQKEIEQVIGSHRPPALDDRAK------MPYTDAVIHEIQRLGDLIPFGVP 349
Query: 431 HRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLP 490
H +DT +GY IPK+T + + L D ++ P F P FL+ GA++ + ++P
Sbjct: 350 HTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEGFMP 409
Query: 491 FGAG 494
F G
Sbjct: 410 FSLG 413
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/351 (30%), Positives = 182/351 (51%), Gaps = 18/351 (5%)
Query: 476 LNDKGAIQVPDQYLPFGAGPDRLLVTDEQLWVEQRRFVLRQLREFGFGKRTMAQLVEEEA 535
+ +G I V D P G + E+ W RRF L +R+FG GKR++ + ++EEA
Sbjct: 76 FSGRGKIAVVD---PIFQGYGVIFANGER-WRALRRFSLATMRDFGMGKRSVEERIQEEA 131
Query: 536 YQLVQLFKQEVQDGGAIIPMRDAFSVPVLNTLWSMLAGIRYSPEDKELKKIQSLLTELFA 595
LV+ ++ GA++ F N + S++ G R+ +D ++ L + F+
Sbjct: 132 RCLVEELRKS---KGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFFQSFS 188
Query: 596 NID----MVGALFSQFPILRYVAPEMSGYKSFVSIHQKVWKFLRNELDNHKETFNPDEMR 651
I V LFS F L+Y ++ Q++ F+ ++ H+ T +P R
Sbjct: 189 LISSFSSQVFELFSGF--LKYFP---GTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPR 243
Query: 652 DIMDVYLKTLKSE--DKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQK 709
D +DVYL ++ + D + F L+ + +F AG+ETTS +L +GFL +L +P V +
Sbjct: 244 DFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTE 303
Query: 710 KAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFI 769
+ Q EI++V+G R P+L+DR MPY +A+ +E R+ F +PH +DT +GY I
Sbjct: 304 RVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVI 363
Query: 770 PKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAGR 820
PK+T + + L D ++ P F P FL+ GA++ + ++PF G+
Sbjct: 364 PKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGK 414
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 113/484 (23%), Positives = 202/484 (41%), Gaps = 91/484 (18%)
Query: 27 TKKPRNFPPGPDWIPILGSALAIQKLRNQTGYLYQACAELSKQYGPVVGLRVGKDRQVVC 86
T PPGP +P+LG+ L + + L ++ L ++YG V + +G VV
Sbjct: 5 TSSKGKLPPGPSPLPVLGNLLQMDR-----KGLLRSFLRLREKYGDVFTVYLGSRPVVVL 59
Query: 87 FGYPAIKEMLSKEEFDGRPRGPFYETRTWGKRQGLMEGTVTAKVLSSLKRREKEDRIGES 146
G AI+E L + ++
Sbjct: 60 CGTDAIREAL----------------------------------------------VDQA 73
Query: 147 QPFRERAGIKPVTALGYKVDVLLSKAGLLVTDEQLWVEQRRFVLRQLREFGFGKRTMAQL 206
+ F R I VD + G++ + + W RRF L +R+FG GKR++ +
Sbjct: 74 EAFSGRGKIA-------VVDPIFQGYGVIFANGERWRALRRFSLATMRDFGMGKRSVEER 126
Query: 207 VEEEAYQLVQLFKQEVQHLSLPGAIIPMRDAFSVPVLNTLWSMLAGIRYSPEDKELKKIQ 266
++EEA LV+ ++ GA++ F N + S++ G R+ +D ++
Sbjct: 127 IQEEARCLVEELRKS------KGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLL 180
Query: 267 SL----LTELFANIDMVGALFSQFPILRYVAPEMSGYKSFVSIHQKVWKFLRNELDNHKE 322
L + + + V LFS F L+Y ++ Q++ F+ ++ H+
Sbjct: 181 DLFFQSFSLISSFSSQVFELFSGF--LKYFP---GTHRQIYRNLQEINTFIGQSVEKHRA 235
Query: 323 TFNPDEMRDIMDVYLKTLKSE--DKTDTFSESQLLAICMDMFMAGSETTTT--------- 371
T +P RD +DVYL ++ + D + F L+ + +F AG+ETT+T
Sbjct: 236 TLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLM 295
Query: 372 LPSRHVNSH-DMIVCFYLNRYLTSSMYTRSRRSLVQTLPYLEAITYESVRVFMGRTFSIP 430
L HV + + + ++ R++ +PY +A+ +E R+ F +P
Sbjct: 296 LKYPHVTERVQKEIEQVIGSHRPPALDDRAK------MPYTDAVIHEIQRLGDLIPFGVP 349
Query: 431 HRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLP 490
H +DT +GY IPK+T + + L D ++ P F P FL+ GA++ + ++P
Sbjct: 350 HTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEGFMP 409
Query: 491 FGAG 494
F G
Sbjct: 410 FSLG 413
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 170 bits (431), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 108/351 (30%), Positives = 182/351 (51%), Gaps = 18/351 (5%)
Query: 476 LNDKGAIQVPDQYLPFGAGPDRLLVTDEQLWVEQRRFVLRQLREFGFGKRTMAQLVEEEA 535
+ +G I V D P G + E+ W RRF L +R+FG GKR++ + ++EEA
Sbjct: 76 FSGRGKIAVVD---PIFQGYGVIFANGER-WRALRRFSLATMRDFGMGKRSVEERIQEEA 131
Query: 536 YQLVQLFKQEVQDGGAIIPMRDAFSVPVLNTLWSMLAGIRYSPEDKELKKIQSLLTELFA 595
LV+ ++ GA++ F N + S++ G R+ +D ++ L + F+
Sbjct: 132 RCLVEELRKS---KGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFFQSFS 188
Query: 596 NID----MVGALFSQFPILRYVAPEMSGYKSFVSIHQKVWKFLRNELDNHKETFNPDEMR 651
I V LFS F L+Y ++ Q++ F+ ++ H+ T +P R
Sbjct: 189 LISSFSSQVFELFSGF--LKYFP---GTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPR 243
Query: 652 DIMDVYLKTLKSE--DKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQK 709
D +DVYL ++ + D + F L+ + +F AG+ETTS +L +GFL +L +P V +
Sbjct: 244 DFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTE 303
Query: 710 KAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFI 769
+ Q EI++V+G R P+L+DR MPY +A+ +E R+ F +PH +DT +GY I
Sbjct: 304 RVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVI 363
Query: 770 PKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAGR 820
PK+T + + L D ++ P F P FL+ GA++ + ++PF G+
Sbjct: 364 PKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGK 414
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 113/484 (23%), Positives = 202/484 (41%), Gaps = 91/484 (18%)
Query: 27 TKKPRNFPPGPDWIPILGSALAIQKLRNQTGYLYQACAELSKQYGPVVGLRVGKDRQVVC 86
T PPGP +P+LG+ L + + L ++ L ++YG V + +G VV
Sbjct: 5 TSSKGKLPPGPSPLPVLGNLLQMDR-----KGLLRSFLRLREKYGDVFTVYLGSRPVVVL 59
Query: 87 FGYPAIKEMLSKEEFDGRPRGPFYETRTWGKRQGLMEGTVTAKVLSSLKRREKEDRIGES 146
G AI+E L + ++
Sbjct: 60 CGTDAIREAL----------------------------------------------VDQA 73
Query: 147 QPFRERAGIKPVTALGYKVDVLLSKAGLLVTDEQLWVEQRRFVLRQLREFGFGKRTMAQL 206
+ F R I VD + G++ + + W RRF L +R+FG GKR++ +
Sbjct: 74 EAFSGRGKIA-------VVDPIFQGYGVIFANGERWRALRRFSLATMRDFGMGKRSVEER 126
Query: 207 VEEEAYQLVQLFKQEVQHLSLPGAIIPMRDAFSVPVLNTLWSMLAGIRYSPEDKELKKIQ 266
++EEA LV+ ++ GA++ F N + S++ G R+ +D ++
Sbjct: 127 IQEEARCLVEELRKS------KGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLL 180
Query: 267 SL----LTELFANIDMVGALFSQFPILRYVAPEMSGYKSFVSIHQKVWKFLRNELDNHKE 322
L + + + V LFS F L+Y ++ Q++ F+ ++ H+
Sbjct: 181 DLFFQSFSLISSFSSQVFELFSGF--LKYFP---GTHRQIYRNLQEINTFIGQSVEKHRA 235
Query: 323 TFNPDEMRDIMDVYLKTLKSE--DKTDTFSESQLLAICMDMFMAGSETTTT--------- 371
T +P RD +DVYL ++ + D + F L+ + +F AG+ETT+T
Sbjct: 236 TLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLM 295
Query: 372 LPSRHVNSH-DMIVCFYLNRYLTSSMYTRSRRSLVQTLPYLEAITYESVRVFMGRTFSIP 430
L HV + + + ++ R++ +PY +A+ +E R+ F +P
Sbjct: 296 LKYPHVTERVQKEIEQVIGSHRPPALDDRAK------MPYTDAVIHEIQRLGDLIPFGVP 349
Query: 431 HRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLP 490
H +DT +GY IPK+T + + L D ++ P F P FL+ GA++ + ++P
Sbjct: 350 HTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEGFMP 409
Query: 491 FGAG 494
F G
Sbjct: 410 FSLG 413
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 104/319 (32%), Positives = 161/319 (50%), Gaps = 10/319 (3%)
Query: 506 WVEQRRFVLRQLREFGFGKRTMAQLVEEEAYQLVQLFKQEVQDGGAIIPMRDAFSVPVLN 565
W EQRRF + LR G GK+++ Q V EEA L F G P V N
Sbjct: 106 WREQRRFSVSTLRNLGLGKKSLEQWVTEEAACLCAAFAN--HSGRPFRP-NGLLDKAVSN 162
Query: 566 TLWSMLAGIRYSPEDKELKKIQSLLTE-LFANIDMVGALFSQFPILRYVAPEMSGYKSFV 624
+ S+ G R+ +D ++ L E L + + + P+ R++ P ++G +
Sbjct: 163 VIASLTCGRRFEYDDPRFLRLLDLAQEGLKEESGFLREVLNAVPVDRHI-PALAG--KVL 219
Query: 625 SIHQKVWKFLRNELDNHKETFNPDEM-RDIMDVYLKTLKSE--DKTDTFSESQLLAICMD 681
+ L L H+ T++P + RD+ + +L ++ + +F++ L + D
Sbjct: 220 RFQKAFLTQLDELLTEHRMTWDPAQPPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVAD 279
Query: 682 MFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITY 741
+F AG TTS +L +G L ++LHPDVQ++ Q EID V+G+ R P + D+ HMPY A+ +
Sbjct: 280 LFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEMGDQAHMPYTTAVIH 339
Query: 742 ESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERFL 801
E R + H RD +QG+ IPK T +I N + VL D+ W P F PE FL
Sbjct: 340 EVQRFGDIVPLGMTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFL 399
Query: 802 NDKGAIQVPDQYLPFGAGR 820
+ +G P+ +LPF AGR
Sbjct: 400 DAQGHFVKPEAFLPFSAGR 418
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 143/323 (44%), Gaps = 21/323 (6%)
Query: 182 WVEQRRFVLRQLREFGFGKRTMAQLVEEEAYQLVQLFKQEVQHLSLPGAIIPMRDAFSVP 241
W EQRRF + LR G GK+++ Q V EEA L F P ++
Sbjct: 106 WREQRRFSVSTLRNLGLGKKSLEQWVTEEAACLCAAFANHSGRPFRPNGLL------DKA 159
Query: 242 VLNTLWSMLAGIRYSPEDKELKKIQSLLTE-LFANIDMVGALFSQFPILRYVAPEMSGYK 300
V N + S+ G R+ +D ++ L E L + + + P+ R++ P ++G
Sbjct: 160 VSNVIASLTCGRRFEYDDPRFLRLLDLAQEGLKEESGFLREVLNAVPVDRHI-PALAG-- 216
Query: 301 SFVSIHQKVWKFLRNELDNHKETFNPDEM-RDIMDVYLKTLKSE--DKTDTFSESQLLAI 357
+ + L L H+ T++P + RD+ + +L ++ + +F++ L +
Sbjct: 217 KVLRFQKAFLTQLDELLTEHRMTWDPAQPPRDLTEAFLAEMEKAKGNPESSFNDENLRIV 276
Query: 358 CMDMFMAGSETTTTLPSRHVNSHDMIVCFYLNRYLTSSM------YTRSRRSLVQTLPYL 411
D+F AG TT+T + + MI+ + R + + R +PY
Sbjct: 277 VADLFSAGMVTTSTTLAWGLLL--MILHPDVQRRVQQEIDDVIGQVRRPEMGDQAHMPYT 334
Query: 412 EAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFR 471
A+ +E R + H RD +QG+ IPK T +I N + VL D+ W P F
Sbjct: 335 TAVIHEVQRFGDIVPLGMTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFH 394
Query: 472 PERFLNDKGAIQVPDQYLPFGAG 494
PE FL+ +G P+ +LPF AG
Sbjct: 395 PEHFLDAQGHFVKPEAFLPFSAG 417
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 170 bits (430), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 97/334 (29%), Positives = 172/334 (51%), Gaps = 9/334 (2%)
Query: 491 FGAGPDR-LLVTDEQLWVEQRRFVLRQLREFGFGKRTMAQLVEEEAYQLVQLFKQEVQDG 549
F A DR ++ + W + RRF L LR +G GK+ ++ EA+ L++ ++ G
Sbjct: 85 FHAHRDRGIIFNNGPTWKDIRRFSLTTLRNYGMGKQGNESRIQREAHFLLEALRK--TQG 142
Query: 550 GAIIPMRDAFSVPVLNTLWSMLAGIRYSPEDKELKKIQSLLTELFANIDMVG-ALFSQFP 608
P P N + +L + D++ ++ L E F + L++ FP
Sbjct: 143 QPFDPTFLIGCAPC-NVIADILFRKHFDYNDEKFLRLMYLFNENFHLLSTPWLQLYNNFP 201
Query: 609 ILRYVAPEMSGYKSFVSIHQKVWKFLRNELDNHKETFNPDEMRDIMDVYLKTLKSEDKTD 668
+ P ++ + +V +++ + H ++ +P+ RD+ D L ++ E +
Sbjct: 202 SFLHYLP--GSHRKVIKNVAEVKEYVSERVKEHHQSLDPNCPRDLTDCLLVEMEKEKHSA 259
Query: 669 T--FSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDRLPS 726
++ + D+F AG+ETTS +L +G L L+ +P++++K EIDRV+G R+P+
Sbjct: 260 ERLYTMDGITVTVADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSRIPA 319
Query: 727 LNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDK 786
+ DR MPY++A+ +E R ++PH A RDT +GY IPK T+++ + VL D
Sbjct: 320 IKDRQEMPYMDAVVHEIQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDN 379
Query: 787 EFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAGR 820
+ + DPE F+PE FLN+ G + D + PF G+
Sbjct: 380 QEFPDPEKFKPEHFLNENGKFKYSDYFKPFSTGK 413
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 151/336 (44%), Gaps = 29/336 (8%)
Query: 173 GLLVTDEQLWVEQRRFVLRQLREFGFGKRTMAQLVEEEAYQLVQLFKQEVQHLSLPGAII 232
G++ + W + RRF L LR +G GK+ ++ EA+ L++ ++ P +I
Sbjct: 92 GIIFNNGPTWKDIRRFSLTTLRNYGMGKQGNESRIQREAHFLLEALRKTQGQPFDPTFLI 151
Query: 233 PMRDAFSVPVLNTLWSMLAGIRYSPEDKELKKIQSLLTELFANIDMVG-ALFSQFPILRY 291
N + +L + D++ ++ L E F + L++ FP +
Sbjct: 152 ------GCAPCNVIADILFRKHFDYNDEKFLRLMYLFNENFHLLSTPWLQLYNNFPSFLH 205
Query: 292 VAPEMSGYKSFVSIHQKVWKFLRNELDNHKETFNPDEMRDIMDVYLKTLKSEDKTDT--F 349
P ++ + +V +++ + H ++ +P+ RD+ D L ++ E + +
Sbjct: 206 YLP--GSHRKVIKNVAEVKEYVSERVKEHHQSLDPNCPRDLTDCLLVEMEKEKHSAERLY 263
Query: 350 SESQLLAICMDMFMAGSETTTT-----------LPSRHVNSHDMIVCFYLNRYLTSSMYT 398
+ + D+F AG+ETT+T P H+ I +R + S
Sbjct: 264 TMDGITVTVADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEI-----DRVIGPSRIP 318
Query: 399 RSRRSLVQTLPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVL 458
+ Q +PY++A+ +E R ++PH A RDT +GY IPK T+++ + VL
Sbjct: 319 AIKDR--QEMPYMDAVVHEIQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVL 376
Query: 459 MDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAG 494
D + + DPE F+PE FLN+ G + D + PF G
Sbjct: 377 YDNQEFPDPEKFKPEHFLNENGKFKYSDYFKPFSTG 412
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 33 FPPGPDWIPILGSALAIQKLRNQTGYLYQACAELSKQYGPVVGLRVGKDRQVVCFGYPAI 92
PPGP +PI+G+ ++ L+N + ++ L++++GPV L VG R VV GY A+
Sbjct: 11 LPPGPFPLPIIGNLFQLE-LKN----IPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAV 65
Query: 93 KEML--SKEEFDGRPRGP-FYETRTWG 116
KE L K+EF GR P F+ R G
Sbjct: 66 KEALLDYKDEFSGRGDLPAFHAHRDRG 92
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 101/316 (31%), Positives = 167/316 (52%), Gaps = 12/316 (3%)
Query: 510 RRFVLRQLREFGFGKRTMAQLVEEEAYQLVQLFKQEVQDGGAIIPMRDAFSVPVLNTLWS 569
RRF + LR FG GKR + + ++EEA L+ + GA I S V N + S
Sbjct: 106 RRFSIATLRGFGVGKRGIEERIQEEAGFLIDALRG---THGANIDPTFFLSRTVSNVISS 162
Query: 570 MLAGIRYSPEDKE-LKKIQSLLTELFANIDMVGALFSQFP-ILRYV-APEMSGYKSFVSI 626
++ G R+ EDKE L ++ +L G L+ F +++++ P+ +K
Sbjct: 163 IVFGDRFDYEDKEFLSLLRMMLGSFQFTATSTGQLYEMFSSVMKHLPGPQQQAFKEL--- 219
Query: 627 HQKVWKFLRNELDNHKETFNPDEMRDIMDVYLKTLKSEDKTDT--FSESQLLAICMDMFM 684
Q + F+ ++++++ T +P+ RD +D +L ++ E+K F L+ +++F
Sbjct: 220 -QGLEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFF 278
Query: 685 AGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYESV 744
AG+ET S +L +GFL L+ HP+V+ K EIDRV+G++R P DR MPY EA+ +E
Sbjct: 279 AGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYTEAVIHEIQ 338
Query: 745 RVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDK 804
R + HR +DT + +F+PK T + VL D F+ +P F P+ FL+ K
Sbjct: 339 RFGDMLPMGLAHRVNKDTKFRDFFLPKGTEVFPMLGSVLRDPRFFSNPRDFNPQHFLDKK 398
Query: 805 GAIQVPDQYLPFGAGR 820
G + D ++PF G+
Sbjct: 399 GQFKKSDAFVPFSIGK 414
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 119/482 (24%), Positives = 203/482 (42%), Gaps = 101/482 (20%)
Query: 34 PPGPDWIPILGSALAIQKLRNQTGYLYQACAELSKQYGPVVGLRVGKDRQVVCFGYPAIK 93
PPGP +P +G+ L + T +Y + ++S++YGPV + +G R VV G+ A+K
Sbjct: 12 PPGPTPLPFIGNYLQLN-----TEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVK 66
Query: 94 EML--SKEEFDGRPRGPFYETRTWGKRQGLMEGTVTAKVLSSLKRREKEDRIGESQPFRE 151
E L EEF GR GE F
Sbjct: 67 EALVDQAEEFSGR---------------------------------------GEQATF-- 85
Query: 152 RAGIKPVTALGYKVDVLLSKAGLLVTDEQLWVEQRRFVLRQLREFGFGKRTMAQLVEEEA 211
D L G+ ++ + + RRF + LR FG GKR + + ++EEA
Sbjct: 86 --------------DWLFKGYGVAFSNGERAKQLRRFSIATLRGFGVGKRGIEERIQEEA 131
Query: 212 YQLVQLFKQEVQHLSLPGAIIPMRDAFSVPVLNTLWSMLAGIRYSPEDKE-LKKIQSLLT 270
L+ + GA I S V N + S++ G R+ EDKE L ++ +L
Sbjct: 132 GFLIDALR------GTHGANIDPTFFLSRTVSNVISSIVFGDRFDYEDKEFLSLLRMMLG 185
Query: 271 ELFANIDMVGALFSQFP-ILRYV-APEMSGYKSFVSIHQKVWKFLRNELDNHKETFNPDE 328
G L+ F +++++ P+ +K Q + F+ ++++++ T +P+
Sbjct: 186 SFQFTATSTGQLYEMFSSVMKHLPGPQQQAFKEL----QGLEDFIAKKVEHNQRTLDPNS 241
Query: 329 MRDIMDVYLKTLKSEDKTDT--FSESQLLAICMDMFMAGSETTTTL-----------PSR 375
RD +D +L ++ E+K F L+ +++F AG+ET +T P
Sbjct: 242 PRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFFAGTETVSTTLRYGFLLLMKHPEV 301
Query: 376 HVNSHDMIVCFYLNRYLTSSMYTRSRRSLVQ---TLPYLEAITYESVRVFMGRTFSIPHR 432
H+ I + ++R+ + +PY EA+ +E R + HR
Sbjct: 302 EAKVHEEI----------DRVIGKNRQPKFEDRAKMPYTEAVIHEIQRFGDMLPMGLAHR 351
Query: 433 ALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFG 492
+DT + +F+PK T + VL D F+ +P F P+ FL+ KG + D ++PF
Sbjct: 352 VNKDTKFRDFFLPKGTEVFPMLGSVLRDPRFFSNPRDFNPQHFLDKKGQFKKSDAFVPFS 411
Query: 493 AG 494
G
Sbjct: 412 IG 413
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 104/335 (31%), Positives = 167/335 (49%), Gaps = 26/335 (7%)
Query: 498 LLVTDEQLWVEQRRFVLRQLREFGFGKRTMAQLVEEEAYQLVQLFKQEVQDGGAIIPMRD 557
++ ++ + W E RRF L LR FG GKR++ V+EEA+ LV+ ++ P
Sbjct: 94 IISSNGKRWKEIRRFSLTTLRNFGMGKRSIEDRVQEEAHCLVEELRKTKAS-----PCDP 148
Query: 558 AF--SVPVLNTLWSMLAGIRYSPEDKELKKIQSLLTELFANIDMVG-ALFSQFPILRYVA 614
F N + S++ R+ +D+ + E F ++ + + FP+L
Sbjct: 149 TFILGCAPCNVICSVVFQKRFDYKDQNFLTLMKRFNENFRILNSPWIQVCNNFPLL---- 204
Query: 615 PEMSGYKSFVSIHQKVWK-------FLRNELDNHKETFNPDEMRDIMDVYLKTLKSE--D 665
F H KV K ++R ++ H+ + + + RD +D +L ++ E +
Sbjct: 205 -----IDCFPGTHNKVLKNVALTRSYIREKVKEHQASLDVNNPRDFIDCFLIKMEQEKDN 259
Query: 666 KTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDRLP 725
+ F+ L+ D+F+AG+ETTS +L +G L LL HP+V K Q EID V+GR R P
Sbjct: 260 QKSEFNIENLVGTVADLFVAGTETTSTTLRYGLLLLLKHPEVTAKVQEEIDHVIGRHRSP 319
Query: 726 SLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMD 785
+ DR HMPY +A+ +E R +PH DT + Y IPK T I+A VL D
Sbjct: 320 CMQDRSHMPYTDAVVHEIQRYSDLVPTGVPHAVTTDTKFRNYLIPKGTTIMALLTSVLHD 379
Query: 786 KEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAGR 820
+ + +P +F P FL+ G + D ++PF AG+
Sbjct: 380 DKEFPNPNIFDPGHFLDKNGNFKKSDYFMPFSAGK 414
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 122/484 (25%), Positives = 197/484 (40%), Gaps = 103/484 (21%)
Query: 33 FPPGPDWIPILGSALAIQKLRNQTGYLYQACAELSKQYGPVVGLRVGKDRQVVCFGYPAI 92
PPGP +PI+G+ L I + ++ SK YGPV + G + VV GY A+
Sbjct: 11 LPPGPTPLPIIGNMLQID-----VKDICKSFTNFSKVYGPVFTVYFGMNPIVVFHGYEAV 65
Query: 93 KEML--SKEEFDGRPRGPFYETRTWGKRQGLMEGTVTAKVLSSLKRREKEDRIGESQPFR 150
KE L + EEF GR P + T G ++SS +R
Sbjct: 66 KEALIDNGEEFSGRGNSPISQRITKG-----------LGIISSNGKR------------- 101
Query: 151 ERAGIKPVTALGYKVDVLLSKAGLLVTDEQLWVEQRRFVLRQLREFGFGKRTMAQLVEEE 210
W E RRF L LR FG GKR++ V+EE
Sbjct: 102 -------------------------------WKEIRRFSLTTLRNFGMGKRSIEDRVQEE 130
Query: 211 AYQLVQLFKQEVQHLSLPGAIIPMRDAFSVPVLNTLWSMLAGIRYSPEDKELKKIQSLLT 270
A+ LV+ ++ P I+ N + S++ R+ +D+ +
Sbjct: 131 AHCLVEELRKTKASPCDPTFIL------GCAPCNVICSVVFQKRFDYKDQNFLTLMKRFN 184
Query: 271 ELFANIDMVG-ALFSQFPILRYVAPEMSGYKSFVSIHQKVWK-------FLRNELDNHKE 322
E F ++ + + FP+L F H KV K ++R ++ H+
Sbjct: 185 ENFRILNSPWIQVCNNFPLL---------IDCFPGTHNKVLKNVALTRSYIREKVKEHQA 235
Query: 323 TFNPDEMRDIMDVYLKTLKSE--DKTDTFSESQLLAICMDMFMAGSETTTTL-------P 373
+ + + RD +D +L ++ E ++ F+ L+ D+F+AG+ETT+T
Sbjct: 236 SLDVNNPRDFIDCFLIKMEQEKDNQKSEFNIENLVGTVADLFVAGTETTSTTLRYGLLLL 295
Query: 374 SRHVNSHDMI---VCFYLNRYLTSSMYTRSRRSLVQTLPYLEAITYESVRVFMGRTFSIP 430
+H + + + R+ + M RS +PY +A+ +E R +P
Sbjct: 296 LKHPEVTAKVQEEIDHVIGRHRSPCMQDRSH------MPYTDAVVHEIQRYSDLVPTGVP 349
Query: 431 HRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLP 490
H DT + Y IPK T I+A VL D + + +P +F P FL+ G + D ++P
Sbjct: 350 HAVTTDTKFRNYLIPKGTTIMALLTSVLHDDKEFPNPNIFDPGHFLDKNGNFKKSDYFMP 409
Query: 491 FGAG 494
F AG
Sbjct: 410 FSAG 413
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 162 bits (409), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 168/330 (50%), Gaps = 19/330 (5%)
Query: 505 LWVEQRRFVLRQLREFGFGKRT-------MAQLVEEEAYQLVQLFKQEVQDGGAIIPMRD 557
+W +RR L+ F + + V +EA L+ ++ + G P R
Sbjct: 103 VWAARRRLAQNGLKSFSIASDPASSTSCYLEEHVSKEAEVLISTLQELMAGPGHFNPYRY 162
Query: 558 AFSVPVLNTLWSMLAGIRYSPEDKELKKIQSLLTELFANIDMVGALFSQFPILRYVA-PE 616
V V N + ++ G RY +EL L F + G PILRY+ P
Sbjct: 163 VV-VSVTNVICAICFGRRYDHNHQELLS-LVNLNNNFGEVVGSGNPADFIPILRYLPNPS 220
Query: 617 MSGYKSFVSIHQKVWKFLRNELDNHKETFNPDEMRDIMDVYLKTLK----SEDKTDTFSE 672
++ +K +++K + F++ + H +TF +RDI D ++ + E+ S+
Sbjct: 221 LNAFKD---LNEKFYSFMQKMVKEHYKTFEKGHIRDITDSLIEHCQEKQLDENANVQLSD 277
Query: 673 SQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDRLPSLNDRPH 732
+++ I +D+F AG +T + ++ + +YL+++P VQ+K Q E+D V+GR R P L+DR H
Sbjct: 278 EKIINIVLDLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIGRSRRPRLSDRSH 337
Query: 733 MPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDP 792
+PY+EA E+ R F+IPH RDT+L+G++IPK + N + D++ W +P
Sbjct: 338 LPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKGFYIPKGRCVFVNQWQINHDQKLWVNP 397
Query: 793 EVFRPERFLNDKGAIQ--VPDQYLPFGAGR 820
F PERFL GAI + ++ + FG G+
Sbjct: 398 SEFLPERFLTPDGAIDKVLSEKVIIFGMGK 427
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 126/485 (25%), Positives = 210/485 (43%), Gaps = 85/485 (17%)
Query: 34 PPGPDWIPILGSALAIQKLRNQTGYLYQACAELSKQYGPVVGLRVGKDRQVVCFGYPAIK 93
PPGP P++G L + K + A + +S+QYG V+ +R+G VV G I+
Sbjct: 13 PPGPWGWPLIGHMLTLGK------NPHLALSRMSQQYGDVLQIRIGSTPVVVLSGLDTIR 66
Query: 94 EMLSKE--EFDGRPRGPFYETRTWGKRQGLMEGTVTAKVLSSLKRREKEDRIGESQPFRE 151
+ L ++ +F GRP T ++S+ G+S F
Sbjct: 67 QALVRQGDDFKGRP------------------DLYTFTLISN----------GQSMSFSP 98
Query: 152 RAGIKPVTALGYKVDVLLSKAGLLVTDEQLWVEQRRFVLRQLREFGFGK---RTMAQLVE 208
+G PV W +RR L+ F + + +E
Sbjct: 99 DSG--PV-----------------------WAARRRLAQNGLKSFSIASDPASSTSCYLE 133
Query: 209 EEAYQLVQLFKQEVQHL-SLPGAIIPMRDAFSVPVLNTLWSMLAGIRYSPEDKELKKIQS 267
E + ++ +Q L + PG P R V V N + ++ G RY +EL
Sbjct: 134 EHVSKEAEVLISTLQELMAGPGHFNPYRYVV-VSVTNVICAICFGRRYDHNHQELLS-LV 191
Query: 268 LLTELFANIDMVGALFSQFPILRYVA-PEMSGYKSFVSIHQKVWKFLRNELDNHKETFNP 326
L F + G PILRY+ P ++ +K +++K + F++ + H +TF
Sbjct: 192 NLNNNFGEVVGSGNPADFIPILRYLPNPSLNAFKD---LNEKFYSFMQKMVKEHYKTFEK 248
Query: 327 DEMRDIMDVYLKTLK----SEDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDM 382
+RDI D ++ + E+ S+ +++ I +D+F AG +T TT S + +
Sbjct: 249 GHIRDITDSLIEHCQEKQLDENANVQLSDEKIINIVLDLFGAGFDTVTTAISWSLMY--L 306
Query: 383 IVCFYLNRYLTSSMYT---RSRR---SLVQTLPYLEAITYESVRVFMGRTFSIPHRALRD 436
++ + R + + T RSRR S LPY+EA E+ R F+IPH RD
Sbjct: 307 VMNPRVQRKIQEELDTVIGRSRRPRLSDRSHLPYMEAFILETFRHSSFVPFTIPHSTTRD 366
Query: 437 TTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQ--VPDQYLPFGAG 494
T+L+G++IPK + N + D++ W +P F PERFL GAI + ++ + FG G
Sbjct: 367 TSLKGFYIPKGRCVFVNQWQINHDQKLWVNPSEFLPERFLTPDGAIDKVLSEKVIIFGMG 426
Query: 495 PDRLL 499
+ +
Sbjct: 427 KRKCI 431
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 162 bits (409), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 112/358 (31%), Positives = 173/358 (48%), Gaps = 35/358 (9%)
Query: 491 FGAGPD---RLLVTDEQ----------LWVEQRRFVLRQLREFGFGKRT-------MAQL 530
F PD L+TD Q +W +RR L F + +
Sbjct: 81 FKGRPDLYTSTLITDGQSLTFSTDSGPVWAARRRLAQNALNTFSIASDPASSSSCYLEEH 140
Query: 531 VEEEAYQLVQLFKQEVQDGGAIIPMRDAFSVPVLNTLWSMLAGIRYSPE--DKELKKIQS 588
V +EA L+ ++ + G P V V N + +M G + PE D+ L +++
Sbjct: 141 VSKEAKALISRLQELMAGPGHFDPYNQVV-VSVANVIGAMCFGQHF-PESSDEMLSLVKN 198
Query: 589 LLTELFANIDMVGALFSQFPILRYVA-PEMSGYKSFVSIHQKVWKFLRNELDNHKETFNP 647
T F G FPILRY+ P + +K+F +Q+ FL+ + H + F+
Sbjct: 199 --THEFVETASSGNPLDFFPILRYLPNPALQRFKAF---NQRFLWFLQKTVQEHYQDFDK 253
Query: 648 DEMRDIMDVYLKTLKSEDKT--DTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHP 705
+ +RDI K K + + + +++ + D+F AG +T + ++ + +YL+ P
Sbjct: 254 NSVRDITGALFKHSKKGPRASGNLIPQEKIVNLVNDIFGAGFDTVTTAISWSLMYLVTKP 313
Query: 706 DVQKKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQ 765
++Q+K Q E+D V+GR+R P L+DRP +PYLEA E+ R F+IPH RDTTL
Sbjct: 314 EIQRKIQKELDTVIGRERRPRLSDRPQLPYLEAFILETFRHSSFLPFTIPHSTTRDTTLN 373
Query: 766 GYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKG-AIQVP--DQYLPFGAGR 820
G++IPK + N V D E W DP FRPERFL G AI P ++ + FG G+
Sbjct: 374 GFYIPKKCCVFVNQWQVNHDPELWEDPSEFRPERFLTADGTAINKPLSEKMMLFGMGK 431
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 131/503 (26%), Positives = 208/503 (41%), Gaps = 90/503 (17%)
Query: 19 ICILAYLDTKKPRNF--PPGPDWIPILGSALAIQKLRNQTGYLYQACAELSKQYGPVVGL 76
+ +L L + P+ PP P P+LG L + K + A + +S++YG V+ +
Sbjct: 1 MAVLKGLRPRVPKGLKSPPEPWGWPLLGHVLTLGK------NPHLALSRMSQRYGDVLQI 54
Query: 77 RVGKDRQVVCFGYPAIKEMLSKE--EFDGRPRGPFYETRTWGKRQGLMEGTVTAKVLSSL 134
R+G +V I++ L ++ +F GRP T+ +++
Sbjct: 55 RIGSTPVLVLSRLDTIRQALVRQGDDFKGRP------------------DLYTSTLITD- 95
Query: 135 KRREKEDRIGESQPFRERAGIKPVTALGYKVDVLLSKAGLLVTDEQLWVEQRRFVLRQLR 194
G+S F +G PV W +RR L
Sbjct: 96 ---------GQSLTFSTDSG--PV-----------------------WAARRRLAQNALN 121
Query: 195 EFGFGK---RTMAQLVEEEAYQLVQLFKQEVQHL-SLPGAIIPMRDAFSVPVLNTLWSML 250
F + + +EE + + +Q L + PG P V V N + +M
Sbjct: 122 TFSIASDPASSSSCYLEEHVSKEAKALISRLQELMAGPGHFDPYNQVV-VSVANVIGAMC 180
Query: 251 AGIRYSPE--DKELKKIQSLLTELFANIDMVGALFSQFPILRYVA-PEMSGYKSFVSIHQ 307
G + PE D+ L +++ T F G FPILRY+ P + +K+F +Q
Sbjct: 181 FGQHF-PESSDEMLSLVKN--THEFVETASSGNPLDFFPILRYLPNPALQRFKAF---NQ 234
Query: 308 KVWKFLRNELDNHKETFNPDEMRDIMDVYLKTLKSEDKT--DTFSESQLLAICMDMFMAG 365
+ FL+ + H + F+ + +RDI K K + + + +++ + D+F AG
Sbjct: 235 RFLWFLQKTVQEHYQDFDKNSVRDITGALFKHSKKGPRASGNLIPQEKIVNLVNDIFGAG 294
Query: 366 SETTTTLPSRHVNSHDMIVCFYLNRYLTSSMYT------RSRRSLVQTLPYLEAITYESV 419
+T TT S + ++ + R + + T R R S LPYLEA E+
Sbjct: 295 FDTVTTAISWSLMY--LVTKPEIQRKIQKELDTVIGRERRPRLSDRPQLPYLEAFILETF 352
Query: 420 RVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDK 479
R F+IPH RDTTL G++IPK + N V D E W DP FRPERFL
Sbjct: 353 RHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWEDPSEFRPERFLTAD 412
Query: 480 G-AIQVP--DQYLPFGAGPDRLL 499
G AI P ++ + FG G R +
Sbjct: 413 GTAINKPLSEKMMLFGMGKRRCI 435
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/336 (30%), Positives = 172/336 (51%), Gaps = 28/336 (8%)
Query: 498 LLVTDEQLWVEQRRFVLRQLREFGFGKRTMAQLVEEEAYQLVQLFKQEVQDGGAIIPMRD 557
++ ++ + W E RRF L LR FG GKR++ V+EEA LV+ ++ P
Sbjct: 93 IVFSNGKKWKEIRRFSLMTLRNFGMGKRSIEDRVQEEARCLVEELRK--TKASPCDPTFI 150
Query: 558 AFSVPVLNTLWSMLAGIRYSPEDKELKKIQSLLTELFANIDMVGA----LFSQFPILRYV 613
P N + S++ R+ +D++ + L E NI+++ + +++ FP L
Sbjct: 151 LGCAPC-NVICSIIFHKRFDYKDQQFLNLMEKLNE---NIEILSSPWIQVYNNFPAL--- 203
Query: 614 APEMSGYKSFVSIHQKVWK-------FLRNELDNHKETFNPDEMRDIMDVYLKTLKSE-- 664
F H K+ K ++ ++ H+E+ + + +D +D +L ++ E
Sbjct: 204 ------LDYFPGTHNKLLKNVAFMKSYILEKVKEHQESMDMNNPQDFIDCFLMKMEKEKH 257
Query: 665 DKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDRL 724
++ F+ L +D+F AG+ETTS +L + L LL HP+V K Q EI+RV+GR+R
Sbjct: 258 NQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRS 317
Query: 725 PSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLM 784
P + DR HMPY +A+ +E R S+PH D + Y IPK T I+ + VL
Sbjct: 318 PCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLH 377
Query: 785 DKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAGR 820
D + + +PE+F P FL++ G + ++PF AG+
Sbjct: 378 DNKEFPNPEMFDPHHFLDEGGNFKKSKYFMPFSAGK 413
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 130/514 (25%), Positives = 213/514 (41%), Gaps = 110/514 (21%)
Query: 34 PPGPDWIPILGSALAIQKLRNQTGYLYQACAELSKQYGPVVGLRVGKDRQVVCFGYPAIK 93
PPGP +P++G+ L I + ++ LSK YGPV L G VV GY A+K
Sbjct: 11 PPGPTPLPVIGNILQIG-----IKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVK 65
Query: 94 EMLSK--EEFDGRPRGPFYETRTWGKRQGLMEGTVTAKVLSSLKRREKEDRIGESQPFRE 151
E L EEF GR G F P E
Sbjct: 66 EALIDLGEEFSGR--GIF--------------------------------------PLAE 85
Query: 152 RAGIKPVTALGYKVDVLLSKAGLLVTDEQLWVEQRRFVLRQLREFGFGKRTMAQLVEEEA 211
RA G+ G++ ++ + W E RRF L LR FG GKR++ V+EEA
Sbjct: 86 RAN------RGF---------GIVFSNGKKWKEIRRFSLMTLRNFGMGKRSIEDRVQEEA 130
Query: 212 YQLVQLFKQEVQHLSLPGAIIPMRDAFSVPVLNTLWSMLAGIRYSPEDKELKKIQSLLTE 271
LV+ ++ P I+ N + S++ R+ +D++ + L E
Sbjct: 131 RCLVEELRKTKASPCDPTFIL------GCAPCNVICSIIFHKRFDYKDQQFLNLMEKLNE 184
Query: 272 LFANIDMVGA----LFSQFPILRYVAPEMSGYKSFVSIHQKVWK-------FLRNELDNH 320
NI+++ + +++ FP L F H K+ K ++ ++ H
Sbjct: 185 ---NIEILSSPWIQVYNNFPAL---------LDYFPGTHNKLLKNVAFMKSYILEKVKEH 232
Query: 321 KETFNPDEMRDIMDVYLKTLKSE--DKTDTFSESQLLAICMDMFMAGSETTTTL---PSR 375
+E+ + + +D +D +L ++ E ++ F+ L +D+F AG+ETT+T
Sbjct: 233 QESMDMNNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALL 292
Query: 376 HVNSHDMIVC-------FYLNRYLTSSMYTRSRRSLVQTLPYLEAITYESVRVFMGRTFS 428
+ H + + R + M RS +PY +A+ +E R S
Sbjct: 293 LLLKHPEVTAKVQEEIERVIGRNRSPCMQDRSH------MPYTDAVVHEVQRYIDLLPTS 346
Query: 429 IPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQY 488
+PH D + Y IPK T I+ + VL D + + +PE+F P FL++ G + +
Sbjct: 347 LPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNFKKSKYF 406
Query: 489 LPFGAGPDRLLVTDEQLWVEQRRFVLRQLREFGF 522
+PF AG R+ V + +E F+ L+ F
Sbjct: 407 MPFSAG-KRICVGEALAGMELFLFLTSILQNFNL 439
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 103/337 (30%), Positives = 173/337 (51%), Gaps = 30/337 (8%)
Query: 498 LLVTDEQLWVEQRRFVLRQLREFGFGKRTMAQLVEEEAYQLVQLFKQEVQDGGAIIPMRD 557
++ ++ + W E RRF L LR FG GKR++ V+EEA LV+ ++ P
Sbjct: 95 IVFSNGKKWKEIRRFSLMTLRNFGMGKRSIEDRVQEEARCLVEELRK--TKASPCDPTFI 152
Query: 558 AFSVPVLNTLWSMLAGIRYSPEDKELKKIQSLLTELFANIDMVGALFSQF-----PILRY 612
P N + S++ R+ +D++ +L+ +L NI ++ + + Q PI+ Y
Sbjct: 153 LGCAPC-NVICSIIFHKRFDYKDQQF---LNLMEKLNENIKILSSPWIQICNNFSPIIDY 208
Query: 613 VAPEMSGYKSFVSIHQKVWK-------FLRNELDNHKETFNPDEMRDIMDVYLKTLKSE- 664
F H K+ K ++ ++ H+E+ + + +D +D +L ++ E
Sbjct: 209 ----------FPGTHNKLLKNVAFMKSYILEKVKEHQESMDMNNPQDFIDCFLMKMEKEK 258
Query: 665 -DKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDR 723
++ F+ L +D+F AG+ETTS +L + L LL HP+V K Q EI+RV+GR+R
Sbjct: 259 HNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNR 318
Query: 724 LPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVL 783
P + DR HMPY +A+ +E R S+PH D + Y IPK T I+ + VL
Sbjct: 319 SPCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVL 378
Query: 784 MDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAGR 820
D + + +PE+F P FL++ G + ++PF AG+
Sbjct: 379 HDNKEFPNPEMFDPHHFLDEGGNFKKSKYFMPFSAGK 415
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 131/516 (25%), Positives = 214/516 (41%), Gaps = 112/516 (21%)
Query: 33 FPPGPDWIPILGSALAIQKLRNQTGYLYQACAELSKQYGPVVGLRVGKDRQVVCFGYPAI 92
PPGP +P++G+ L I + ++ LSK YGPV L G VV GY A+
Sbjct: 12 LPPGPTPLPVIGNILQIG-----IKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAV 66
Query: 93 KEMLSK--EEFDGRPRGPFYETRTWGKRQGLMEGTVTAKVLSSLKRREKEDRIGESQPFR 150
KE L EEF GR G F P
Sbjct: 67 KEALIDLGEEFSGR--GIF--------------------------------------PLA 86
Query: 151 ERAGIKPVTALGYKVDVLLSKAGLLVTDEQLWVEQRRFVLRQLREFGFGKRTMAQLVEEE 210
ERA G+ G++ ++ + W E RRF L LR FG GKR++ V+EE
Sbjct: 87 ERAN------RGF---------GIVFSNGKKWKEIRRFSLMTLRNFGMGKRSIEDRVQEE 131
Query: 211 AYQLVQLFKQEVQHLSLPGAIIPMRDAFSVPVLNTLWSMLAGIRYSPEDKELKKIQSLLT 270
A LV+ ++ P I+ N + S++ R+ +D++ +L+
Sbjct: 132 ARCLVEELRKTKASPCDPTFIL------GCAPCNVICSIIFHKRFDYKDQQF---LNLME 182
Query: 271 ELFANIDMVGALFSQF-----PILRYVAPEMSGYKSFVSIHQKVWK-------FLRNELD 318
+L NI ++ + + Q PI+ Y F H K+ K ++ ++
Sbjct: 183 KLNENIKILSSPWIQICNNFSPIIDY----------FPGTHNKLLKNVAFMKSYILEKVK 232
Query: 319 NHKETFNPDEMRDIMDVYLKTLKSE--DKTDTFSESQLLAICMDMFMAGSETTTTL---P 373
H+E+ + + +D +D +L ++ E ++ F+ L +D+F AG+ETT+T
Sbjct: 233 EHQESMDMNNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYA 292
Query: 374 SRHVNSHDMIVC-------FYLNRYLTSSMYTRSRRSLVQTLPYLEAITYESVRVFMGRT 426
+ H + + R + M RS +PY +A+ +E R
Sbjct: 293 LLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDRSH------MPYTDAVVHEVQRYIDLLP 346
Query: 427 FSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPD 486
S+PH D + Y IPK T I+ + VL D + + +PE+F P FL++ G +
Sbjct: 347 TSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNFKKSK 406
Query: 487 QYLPFGAGPDRLLVTDEQLWVEQRRFVLRQLREFGF 522
++PF AG R+ V + +E F+ L+ F
Sbjct: 407 YFMPFSAG-KRICVGEALAGMELFLFLTSILQNFNL 441
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 159 bits (403), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 106/337 (31%), Positives = 172/337 (51%), Gaps = 30/337 (8%)
Query: 498 LLVTDEQLWVEQRRFVLRQLREFGFGKRTMAQLVEEEAYQLVQLFKQEVQDGGAIIPMRD 557
++ ++ + W E RRF L LR FG GKR++ V+EEA LV+ ++ P
Sbjct: 95 IVFSNGKRWKEIRRFSLMTLRNFGMGKRSIEDRVQEEARCLVEELRK--TKASPCDPTFI 152
Query: 558 AFSVPVLNTLWSMLAGIRYSPEDKELKKIQSLLTELFANIDMVGA----LFSQFP-ILRY 612
P N + S++ R+ +D++ +L+ +L NI +V + + FP I+ Y
Sbjct: 153 LGCAPC-NVICSIIFQKRFDYKDQQF---LNLMEKLNENIRIVSTPWIQICNNFPTIIDY 208
Query: 613 VAPEMSGYKSFVSIHQKVWKFLR-------NELDNHKETFNPDEMRDIMDVYLKTLKSE- 664
F H K+ K L ++ H+E+ + + RD +D +L ++ E
Sbjct: 209 ----------FPGTHNKLLKNLAFMESDILEKVKEHQESMDINNPRDFIDCFLIKMEKEK 258
Query: 665 -DKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDR 723
++ F+ L+ D+ AG+ETTS +L + L LL HP+V K Q EI+RVVGR+R
Sbjct: 259 QNQQSEFTIENLVITAADLLGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVVGRNR 318
Query: 724 LPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVL 783
P + DR HMPY +A+ +E R S+PH D + Y IPK T I+ + VL
Sbjct: 319 SPCMQDRGHMPYTDAVVHEVQRYIDLIPTSLPHAVTCDVKFRNYLIPKGTTILTSLTSVL 378
Query: 784 MDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAGR 820
D + + +PE+F P FL++ G + + ++PF AG+
Sbjct: 379 HDNKEFPNPEMFDPRHFLDEGGNFKKSNYFMPFSAGK 415
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 126/484 (26%), Positives = 203/484 (41%), Gaps = 103/484 (21%)
Query: 33 FPPGPDWIPILGSALAIQKLRNQTGYLYQACAELSKQYGPVVGLRVGKDRQVVCFGYPAI 92
PPGP +P++G+ L I + ++ LSK YGPV L G +R VV GY +
Sbjct: 12 LPPGPTPLPVIGNILQID-----IKDVSKSLTNLSKIYGPVFTLYFGLERMVVLHGYEVV 66
Query: 93 KEMLSK--EEFDGRPRGPFYETRTWGKRQGLMEGTVTAKVLSSLKRREKEDRIGESQPFR 150
KE L EEF GR G F P
Sbjct: 67 KEALIDLGEEFSGR--GHF--------------------------------------PLA 86
Query: 151 ERAGIKPVTALGYKVDVLLSKAGLLVTDEQLWVEQRRFVLRQLREFGFGKRTMAQLVEEE 210
ERA G+ G++ ++ + W E RRF L LR FG GKR++ V+EE
Sbjct: 87 ERAN------RGF---------GIVFSNGKRWKEIRRFSLMTLRNFGMGKRSIEDRVQEE 131
Query: 211 AYQLVQLFKQEVQHLSLPGAIIPMRDAFSVPVLNTLWSMLAGIRYSPEDKELKKIQSLLT 270
A LV+ ++ P I+ N + S++ R+ +D++ +L+
Sbjct: 132 ARCLVEELRKTKASPCDPTFIL------GCAPCNVICSIIFQKRFDYKDQQF---LNLME 182
Query: 271 ELFANIDMVGA----LFSQFP-ILRYVAPEMSGYKSFVSIHQKVWKFLR-------NELD 318
+L NI +V + + FP I+ Y F H K+ K L ++
Sbjct: 183 KLNENIRIVSTPWIQICNNFPTIIDY----------FPGTHNKLLKNLAFMESDILEKVK 232
Query: 319 NHKETFNPDEMRDIMDVYLKTLKSE--DKTDTFSESQLLAICMDMFMAGSETTTTL---P 373
H+E+ + + RD +D +L ++ E ++ F+ L+ D+ AG+ETT+T
Sbjct: 233 EHQESMDINNPRDFIDCFLIKMEKEKQNQQSEFTIENLVITAADLLGAGTETTSTTLRYA 292
Query: 374 SRHVNSHDMIVCFYLNRYLTSSMYTRSRRSLVQT---LPYLEAITYESVRVFMGRTFSIP 430
+ H + + R+R +Q +PY +A+ +E R S+P
Sbjct: 293 LLLLLKHPEVTAKVQEE--IERVVGRNRSPCMQDRGHMPYTDAVVHEVQRYIDLIPTSLP 350
Query: 431 HRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLP 490
H D + Y IPK T I+ + VL D + + +PE+F P FL++ G + + ++P
Sbjct: 351 HAVTCDVKFRNYLIPKGTTILTSLTSVLHDNKEFPNPEMFDPRHFLDEGGNFKKSNYFMP 410
Query: 491 FGAG 494
F AG
Sbjct: 411 FSAG 414
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/315 (32%), Positives = 158/315 (50%), Gaps = 14/315 (4%)
Query: 506 WVEQRRFVLRQLREFGFGKRTMAQLVE----EEAYQLVQLFKQEVQDGGAIIPMRDAFSV 561
W QRR +R F + Q++E EA +LV L + DG + P R V
Sbjct: 101 WKVQRRAAHSMMRNFFTRQPRSRQVLEGHVLSEARELVALLVRGSADGAFLDP-RPLTVV 159
Query: 562 PVLNTLWSMLAGIRYSPEDKELKKIQSLLTELFANIDMVGALFSQFPILRYVA-PEMSGY 620
V N + ++ G RYS +D E +++ S E F G+L P L+Y P + +
Sbjct: 160 AVANVMSAVCFGCRYSHDDPEFRELLSH-NEEFGRTVGAGSLVDVMPWLQYFPNPVRTVF 218
Query: 621 KSFVSIHQKVWKFLRNELDNHKETFNPDEM-RDIMDVYLKTLKSEDKTDTFSESQLL--- 676
+ F +++ F+ ++ H E+ P RD+MD ++ + + + D+ L
Sbjct: 219 REFEQLNRNFSNFILDKFLRHCESLRPGAAPRDMMDAFILSAEKKAAGDSHGGGARLDLE 278
Query: 677 ---AICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDRLPSLNDRPHM 733
A D+F A +T S +L + L +PDVQ + QAE+D+VVGRDRLP + D+P++
Sbjct: 279 NVPATITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDRLPCMGDQPNL 338
Query: 734 PYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPE 793
PY+ A YE++R +IPH +T++ GY IPKDT++ N V D W +PE
Sbjct: 339 PYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKWPNPE 398
Query: 794 VFRPERFLNDKGAIQ 808
F P RFL+ G I
Sbjct: 399 NFDPARFLDKDGLIN 413
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 118/474 (24%), Positives = 187/474 (39%), Gaps = 95/474 (20%)
Query: 34 PPGPDWIPILGSALAIQKLRNQTGYLYQACAELSKQYGPVVGLRVGKDRQVVCFGYPAIK 93
PPGP P++G+A A+ Q +L + A L+++YG V +R+G VV G AI
Sbjct: 11 PPGPFAWPLIGNAAAV----GQAAHL--SFARLARRYGDVFQIRLGSCPIVVLNGERAIH 64
Query: 94 EMLSKE--EFDGRPRGPFYETRTWGKRQGLMEGTVTAKVLSSLKRREKEDRIGESQPFRE 151
+ L ++ F RP + + G+ + KV +RR +
Sbjct: 65 QALVQQGSAFADRPSFASFRVVSGGRSMAFGHYSEHWKV----QRRAAHSMM-------- 112
Query: 152 RAGIKPVTALGYKVDVLLSKAGLLVTDEQLWVEQRRFVLRQLREFGFGKRTMAQLVEEEA 211
R F RQ R ++ + V EA
Sbjct: 113 ----------------------------------RNFFTRQPRS----RQVLEGHVLSEA 134
Query: 212 YQLVQLFKQEVQHLSLPGAIIPMRDAFSVPVLNTLWSMLAGIRYSPEDKELKKIQSLLTE 271
+LV L + S GA + R V V N + ++ G RYS +D E +++ S E
Sbjct: 135 RELVALLVRG----SADGAFLDPRPLTVVAVANVMSAVCFGCRYSHDDPEFRELLS-HNE 189
Query: 272 LFANIDMVGALFSQFPILRYVA-PEMSGYKSFVSIHQKVWKFLRNELDNHKETFNPDEM- 329
F G+L P L+Y P + ++ F +++ F+ ++ H E+ P
Sbjct: 190 EFGRTVGAGSLVDVMPWLQYFPNPVRTVFREFEQLNRNFSNFILDKFLRHCESLRPGAAP 249
Query: 330 RDIMDVYLKTLKSEDKTDTFSESQLL------AICMDMFMAGSETTTTLPSRHVNSHDMI 383
RD+MD ++ + + + D+ L A D+F A +T +T
Sbjct: 250 RDMMDAFILSAEKKAAGDSHGGGARLDLENVPATITDIFGASQDTLSTAL--------QW 301
Query: 384 VCFYLNRYLTSSMYTRSRRSLVQ--------------TLPYLEAITYESVRVFMGRTFSI 429
+ RY + TR + L Q LPY+ A YE++R +I
Sbjct: 302 LLLLFTRY--PDVQTRVQAELDQVVGRDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTI 359
Query: 430 PHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQ 483
PH +T++ GY IPKDT++ N V D W +PE F P RFL+ G I
Sbjct: 360 PHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKWPNPENFDPARFLDKDGLIN 413
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 158/322 (49%), Gaps = 16/322 (4%)
Query: 506 WVEQRRFVLRQLREFGFGKRTMAQLVEEEAYQLVQLFKQEVQD-GGAIIPMRDAFSVPVL 564
WV+ RR + R FG+G+++ + EE + F ++ G + + V
Sbjct: 107 WVDHRRLAVNSFRYFGYGQKSFESKILEET----KFFNDAIETYKGRPFDFKQLITNAVS 162
Query: 565 NTLWSMLAGIRYSPEDKELKKIQSLLTELFANIDMVGA----LFSQFPILRYVAPEMSGY 620
N ++ G R++ ED + + + L +E N+++ + L++ FP + + +
Sbjct: 163 NITNLIIFGERFTYEDTDFQHMIELFSE---NVELAASASVFLYNAFPWIGILP--FGKH 217
Query: 621 KSFVSIHQKVWKFLRNELDNHKETFNPDEMRDIMDVYLKTLK--SEDKTDTFSESQLLAI 678
+ V+ FL ++ P + +D YL + D + TFS+ L+
Sbjct: 218 QQLFRNAAVVYDFLSRLIEKASVNRKPQLPQHFVDAYLDEMDQGKNDPSSTFSKENLIFS 277
Query: 679 CMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDRLPSLNDRPHMPYLEA 738
++ +AG+ETT+ L + L++ L+P++Q + Q EID ++G + PS +D+ MPY EA
Sbjct: 278 VGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSWDDKCKMPYTEA 337
Query: 739 ITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPE 798
+ +E +R I H D ++GY IPK T +I N V D+++W DPEVF PE
Sbjct: 338 VLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPE 397
Query: 799 RFLNDKGAIQVPDQYLPFGAGR 820
RFL+ G + +PF GR
Sbjct: 398 RFLDSSGYFAKKEALVPFSLGR 419
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 176/400 (44%), Gaps = 40/400 (10%)
Query: 111 ETRTWGKRQGLMEGTVTAKVLSSLKRREKEDRIGESQPFRERAGIKPVTALGYKVDVLLS 170
+++ +G+ L G ++ VL+ KE + +S+ F +R P L K ++
Sbjct: 43 QSQVYGEIFSLDLGGISTVVLNGYDVV-KECLVHQSEIFADR----PCLPLFMK----MT 93
Query: 171 KAGLLVTDE--QLWVEQRRFVLRQLREFGFGKRTMAQLVEEEAYQLVQLFKQEVQHLSLP 228
K G L+ + WV+ RR + R FG+G+++ + EE + F ++ +
Sbjct: 94 KMGGLLNSRYGRGWVDHRRLAVNSFRYFGYGQKSFESKILEET----KFFNDAIE--TYK 147
Query: 229 GAIIPMRDAFSVPVLNTLWSMLAGIRYSPEDKELKKIQSLLTELFANIDMVGA----LFS 284
G + + V N ++ G R++ ED + + + L +E N+++ + L++
Sbjct: 148 GRPFDFKQLITNAVSNITNLIIFGERFTYEDTDFQHMIELFSE---NVELAASASVFLYN 204
Query: 285 QFPILRYVAPEMSGYKSFVSIHQKVWKFLRNELDNHKETFNPDEMRDIMDVYLKTLK--S 342
FP + + ++ V+ FL ++ P + +D YL +
Sbjct: 205 AFPWIGILP--FGKHQQLFRNAAVVYDFLSRLIEKASVNRKPQLPQHFVDAYLDEMDQGK 262
Query: 343 EDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFYLN------RYLTSSM 396
D + TFS+ L+ ++ +AG+ETTT + + + + Y N + + M
Sbjct: 263 NDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAI----LFMALYPNIQGQVQKEIDLIM 318
Query: 397 YTRSRRSLVQT--LPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANF 454
+ S +PY EA+ +E +R I H D ++GY IPK T +I N
Sbjct: 319 GPNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNL 378
Query: 455 NGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAG 494
V D+++W DPEVF PERFL+ G + +PF G
Sbjct: 379 YSVHFDEKYWRDPEVFHPERFLDSSGYFAKKEALVPFSLG 418
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 158/322 (49%), Gaps = 16/322 (4%)
Query: 506 WVEQRRFVLRQLREFGFGKRTMAQLVEEEAYQLVQLFKQEVQD-GGAIIPMRDAFSVPVL 564
WV+ RR + R FG+G+++ + EE + F ++ G + + V
Sbjct: 107 WVDHRRLAVNSFRYFGYGQKSFESKILEET----KFFNDAIETYKGRPFDFKQLITNAVS 162
Query: 565 NTLWSMLAGIRYSPEDKELKKIQSLLTELFANIDMVGA----LFSQFPILRYVAPEMSGY 620
N ++ G R++ ED + + + L +E N+++ + L++ FP + + +
Sbjct: 163 NITNLIIFGERFTYEDTDFQHMIELFSE---NVELAASASVFLYNAFPWIGILP--FGKH 217
Query: 621 KSFVSIHQKVWKFLRNELDNHKETFNPDEMRDIMDVYLKTLK--SEDKTDTFSESQLLAI 678
+ V+ FL ++ P + +D YL + D + TFS+ L+
Sbjct: 218 QQLFRNAAVVYDFLSRLIEKASVNRKPQLPQHFVDAYLDEMDQGKNDPSSTFSKENLIFS 277
Query: 679 CMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDRLPSLNDRPHMPYLEA 738
++ +AG+ETT+ L + L++ L+P++Q + Q EID ++G + PS +D+ MPY EA
Sbjct: 278 VGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSWDDKCKMPYTEA 337
Query: 739 ITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPE 798
+ +E +R I H D ++GY IPK T +I N V D+++W DPEVF PE
Sbjct: 338 VLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPE 397
Query: 799 RFLNDKGAIQVPDQYLPFGAGR 820
RFL+ G + +PF GR
Sbjct: 398 RFLDSSGYFAKKEALVPFSLGR 419
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 176/400 (44%), Gaps = 40/400 (10%)
Query: 111 ETRTWGKRQGLMEGTVTAKVLSSLKRREKEDRIGESQPFRERAGIKPVTALGYKVDVLLS 170
+++ +G+ L G ++ VL+ KE + +S+ F +R P L K ++
Sbjct: 43 QSQVYGEIFSLDLGGISTVVLNGYDVV-KECLVHQSEIFADR----PCLPLFMK----MT 93
Query: 171 KAGLLVTDE--QLWVEQRRFVLRQLREFGFGKRTMAQLVEEEAYQLVQLFKQEVQHLSLP 228
K G L+ + WV+ RR + R FG+G+++ + EE + F ++ +
Sbjct: 94 KMGGLLNSRYGRGWVDHRRLAVNSFRYFGYGQKSFESKILEET----KFFNDAIE--TYK 147
Query: 229 GAIIPMRDAFSVPVLNTLWSMLAGIRYSPEDKELKKIQSLLTELFANIDMVGA----LFS 284
G + + V N ++ G R++ ED + + + L +E N+++ + L++
Sbjct: 148 GRPFDFKQLITNAVSNITNLIIFGERFTYEDTDFQHMIELFSE---NVELAASASVFLYN 204
Query: 285 QFPILRYVAPEMSGYKSFVSIHQKVWKFLRNELDNHKETFNPDEMRDIMDVYLKTLK--S 342
FP + + ++ V+ FL ++ P + +D YL +
Sbjct: 205 AFPWIGILP--FGKHQQLFRNAAVVYDFLSRLIEKASVNRKPQLPQHFVDAYLDEMDQGK 262
Query: 343 EDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFYLN------RYLTSSM 396
D + TFS+ L+ ++ +AG+ETTT + + + + Y N + + M
Sbjct: 263 NDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAI----LFMALYPNIQGQVQKEIDLIM 318
Query: 397 YTRSRRSLVQT--LPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANF 454
+ S +PY EA+ +E +R I H D ++GY IPK T +I N
Sbjct: 319 GPNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNL 378
Query: 455 NGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAG 494
V D+++W DPEVF PERFL+ G + +PF G
Sbjct: 379 YSVHFDEKYWRDPEVFHPERFLDSSGYFAKKEALVPFSLG 418
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 151/325 (46%), Gaps = 18/325 (5%)
Query: 506 WVEQRRFVLRQLREFGFGKRTMAQLVEEEAYQLVQLFKQEVQDGGAIIPMRDAFSVPVLN 565
W RR + F G + + +++ +E L + G I + V V N
Sbjct: 103 WQLHRRLAMATFALFKDGDQKLEKIICQEISTLCDMLATH---NGQSIDISFPVFVAVTN 159
Query: 566 TLWSMLAGIRYSPEDKELKKIQSLLTELFANIDMVGALFSQFPILR-YVAPEMSGYKSFV 624
+ + Y D EL IQ+ + N+ +L P L+ + + KS V
Sbjct: 160 VISLICFNTSYKNGDPELNVIQNYNEGIIDNLSK-DSLVDLVPWLKIFPNKTLEKLKSHV 218
Query: 625 SIHQKVWKFLRNELDNHKETFNPDEMRDIMDVYLKTLKSEDK--------TDTFSESQLL 676
I + L L+N+KE F D + +++D ++ + D ++ S++ +L
Sbjct: 219 KIRNDL---LNKILENYKEKFRSDSITNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHIL 275
Query: 677 AICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDRLPSLNDRPHMPYL 736
D+F AG ETT+ + + +LL +P V+KK EID+ VG R P+++DR + L
Sbjct: 276 TTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLL 335
Query: 737 EAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFR 796
EA E +R+ IPH+A D+++ + + K T +I N + +++ WH P+ F
Sbjct: 336 EATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQFM 395
Query: 797 PERFLNDKGA--IQVPDQYLPFGAG 819
PERFLN G I YLPFGAG
Sbjct: 396 PERFLNPAGTQLISPSVSYLPFGAG 420
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 140/336 (41%), Gaps = 39/336 (11%)
Query: 182 WVEQRRFVLRQLREFGFGKRTMAQLVEEEAYQLVQLFKQEVQHLSLPGAIIPMRDAFSVP 241
W RR + F G + + +++ +E L + G I + V
Sbjct: 103 WQLHRRLAMATFALFKDGDQKLEKIICQEISTLCDMLATH------NGQSIDISFPVFVA 156
Query: 242 VLNTLWSMLAGIRYSPEDKELKKIQSLLTELFANIDMVGALFSQFPILR-YVAPEMSGYK 300
V N + + Y D EL IQ+ + N+ +L P L+ + + K
Sbjct: 157 VTNVISLICFNTSYKNGDPELNVIQNYNEGIIDNLSK-DSLVDLVPWLKIFPNKTLEKLK 215
Query: 301 SFVSIHQKVWKFLRNELDNHKETFNPDEMRDIMDVYLKTLKSEDK--------TDTFSES 352
S V I + L L+N+KE F D + +++D ++ + D ++ S++
Sbjct: 216 SHVKIRNDL---LNKILENYKEKFRSDSITNMLDTLMQAKMNSDNGNAGPDQDSELLSDN 272
Query: 353 QLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFYL-NRYLTSSMYTR-------SRRSL 404
+L D+F AG ETTT++ + F L N + +Y SR
Sbjct: 273 HILTTIGDIFGAGVETTTSVVK-------WTLAFLLHNPQVKKKLYEEIDQNVGFSRTPT 325
Query: 405 V---QTLPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDK 461
+ L LEA E +R+ IPH+A D+++ + + K T +I N + ++
Sbjct: 326 ISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNE 385
Query: 462 EFWHDPEVFRPERFLNDKGA--IQVPDQYLPFGAGP 495
+ WH P+ F PERFLN G I YLPFGAGP
Sbjct: 386 KEWHQPDQFMPERFLNPAGTQLISPSVSYLPFGAGP 421
Score = 37.4 bits (85), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 57 GYLYQACAELSKQYGPVVGLRVGKDRQVVCFGYPAIKEMLSK--EEFDGRPR 106
G+++ +L K+YGP+ +R+G V+ + KE+L K ++F GRP+
Sbjct: 29 GHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQ 80
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 138/291 (47%), Gaps = 17/291 (5%)
Query: 537 QLVQLFKQEVQ-DGGAIIPMRDAFSVPVLNTLWSMLAGIRYSPEDKELKKIQSLLTELFA 595
QL Q F + ++ GA + ++ FS+ + + + G + ED + + +L
Sbjct: 142 QLTQEFCERMRVQAGAPVTIQKEFSLLTCSIICYLTFGNK---EDTLVHAFHDCVQDLMK 198
Query: 596 NIDMVG-ALFSQFPILRYVAPEMSGYKSFVSIHQKVWKFLRNELDNHKETFNPDEMRDIM 654
D + P LR+ P ++ +I + + +L HKE+ + RD+
Sbjct: 199 TWDHWSIQILDMVPFLRFF-PNPGLWRLKQAIENRD-HMVEKQLRRHKESMVAGQWRDMT 256
Query: 655 DVYLKTL---KSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKA 711
D L+ + + E+ E + +D+F+ G+ETT+ +L + +LL HP++Q++
Sbjct: 257 DYMLQGVGRQRVEEGPGQLLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRL 316
Query: 712 QAEIDRVVGRDRLPS---LNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYF 768
Q E+DR +G S DR +P L A E +R+ ++PHR R +++ GY
Sbjct: 317 QEELDRELGPGASCSRVTYKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIFGYD 376
Query: 769 IPKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAG 819
IP+ ++I N G +D+ W P FRP+RFL + GA L FG G
Sbjct: 377 IPEGMVVIPNLQGAHLDETVWEQPHEFRPDRFL-EPGA---NPSALAFGCG 423
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 103/445 (23%), Positives = 182/445 (40%), Gaps = 89/445 (20%)
Query: 66 LSKQYGPVVGLRVGKDRQVVCFGYPAIKEMLSKE--EFDGRPRGPFYETRTWGKRQGLME 123
L+++ GPV LR+G VV I+E + ++ +F GRP+ P Y+
Sbjct: 52 LTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRPQIPSYKL----------- 100
Query: 124 GTVTAKVLSSLKRREKEDRIGESQPFRERAGIKPVTALGYKVDVLLSKAGLLVTDEQLWV 183
+ +R ++ +G+ +L +K L+++ LL+
Sbjct: 101 ----------VSQRCQDISLGD-------------YSLLWKAHKKLTRSALLL------- 130
Query: 184 EQRRFVLRQLREFGFGKRTMAQLVEEEAYQLVQLFKQEVQHLSLPGAIIPMRDAFSVPVL 243
G R+ +E QL Q F + ++ + GA + ++ FS+
Sbjct: 131 ---------------GTRSS---MEPWVDQLTQEFCERMRVQA--GAPVTIQKEFSLLTC 170
Query: 244 NTLWSMLAGIRYSPEDKELKKIQSLLTELFANIDMVG-ALFSQFPILRYVAPEMSGYKSF 302
+ + + G + ED + + +L D + P LR+ P ++
Sbjct: 171 SIICYLTFGNK---EDTLVHAFHDCVQDLMKTWDHWSIQILDMVPFLRFF-PNPGLWRLK 226
Query: 303 VSIHQKVWKFLRNELDNHKETFNPDEMRDIMDVYLKTL---KSEDKTDTFSESQLLAICM 359
+I + + +L HKE+ + RD+ D L+ + + E+ E + +
Sbjct: 227 QAIENRD-HMVEKQLRRHKESMVAGQWRDMTDYMLQGVGRQRVEEGPGQLLEGHVHMSVV 285
Query: 360 DMFMAGSETTTTLPSRHVN---SHDMI---VCFYLNRYL----TSSMYTRSRRSLVQTLP 409
D+F+ G+ETT + S V H I + L+R L + S T R+ LP
Sbjct: 286 DLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPGASCSRVTYKDRA---RLP 342
Query: 410 YLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEV 469
L A E +R+ ++PHR R +++ GY IP+ ++I N G +D+ W P
Sbjct: 343 LLNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAHLDETVWEQPHE 402
Query: 470 FRPERFLNDKGAIQVPDQYLPFGAG 494
FRP+RFL + GA L FG G
Sbjct: 403 FRPDRFL-EPGA---NPSALAFGCG 423
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 150/340 (44%), Gaps = 21/340 (6%)
Query: 490 PFGAGPDRLLVTDEQLWVEQRRFVLRQLREFGFGK-RTMAQLVEEEAYQLVQLFKQEVQD 548
P G + + +++ W R + F GK + M ++ + LV+ ++E +
Sbjct: 90 PVGFMKSAISIAEDEEWKRLRSLLSPT---FTSGKLKEMVPIIAQYGDVLVRNLRREAET 146
Query: 549 GGAIIPMRDAFSVPVLNTLWSMLAGIRY----SPEDKELKKIQSLLTELFANIDMVGALF 604
G + ++D F ++ + S G+ +P+D ++ + LL D + F
Sbjct: 147 GKPVT-LKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKLL-----RFDFLDPFF 200
Query: 605 SQFPILRYVAPEMSGYKSFVSIHQKVWKFLRNELDNHKETFNPDEMRDIMDVYLKTLKSE 664
+ ++ P + V ++V FLR + KE+ D + +D + S+
Sbjct: 201 LSITVFPFLIPILEVLNICV-FPREVTNFLRKSVKRMKESRLEDTQKHRVDFLQLMIDSQ 259
Query: 665 DKTDT-----FSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVV 719
+ +T S+ +L+A + AG ETTS L F L HPDVQ+K Q EID V+
Sbjct: 260 NSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVL 319
Query: 720 GRDRLPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANF 779
P+ + M YL+ + E++R+F + +D + G FIPK +++
Sbjct: 320 PNKAPPTYDTVLQMEYLDMVVNETLRLF-PIAMRLERVCKKDVEINGMFIPKGVVVMIPS 378
Query: 780 NGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAG 819
+ D ++W +PE F PERF P Y PFG+G
Sbjct: 379 YALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPFGSG 418
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/367 (21%), Positives = 158/367 (43%), Gaps = 31/367 (8%)
Query: 171 KAGLLVTDEQLWVEQRRFVLRQLREFGFGK-RTMAQLVEEEAYQLVQLFKQEVQHLSLPG 229
K+ + + +++ W R + F GK + M ++ + LV+ ++E + G
Sbjct: 95 KSAISIAEDEEWKRLRSLLSPT---FTSGKLKEMVPIIAQYGDVLVRNLRREAET----G 147
Query: 230 AIIPMRDAFSVPVLNTLWSMLAGIRY----SPEDKELKKIQSLLTELFANIDMVGALFSQ 285
+ ++D F ++ + S G+ +P+D ++ + LL D + F
Sbjct: 148 KPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKLL-----RFDFLDPFFLS 202
Query: 286 FPILRYVAPEMSGYKSFVSIHQKVWKFLRNELDNHKETFNPDEMRDIMDVYLKTLKSEDK 345
+ ++ P + V ++V FLR + KE+ D + +D + S++
Sbjct: 203 ITVFPFLIPILEVLNICV-FPREVTNFLRKSVKRMKESRLEDTQKHRVDFLQLMIDSQNS 261
Query: 346 TDT-----FSESQLLAICMDMFMAGSETTTTLPS---RHVNSHDMIVCFYLNRYLTSSMY 397
+T S+ +L+A + AG ETT+++ S + +H V L + + +
Sbjct: 262 KETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHP-DVQQKLQEEIDAVLP 320
Query: 398 TRSRRS--LVQTLPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFN 455
++ + V + YL+ + E++R+F + +D + G FIPK +++
Sbjct: 321 NKAPPTYDTVLQMEYLDMVVNETLRLF-PIAMRLERVCKKDVEINGMFIPKGVVVMIPSY 379
Query: 456 GVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAGPDRLLVTDEQLWVEQRRFVLR 515
+ D ++W +PE F PERF P Y PFG+GP R + + + ++R
Sbjct: 380 ALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPFGSGP-RNCIGMRFALMNMKLALIR 438
Query: 516 QLREFGF 522
L+ F F
Sbjct: 439 VLQNFSF 445
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 47/116 (40%), Gaps = 25/116 (21%)
Query: 35 PGPDWIPILGSALAIQKLRNQTGYLYQAC---AELSKQYGPVVGLRVGKDRQVVCFGYPA 91
PGP +P LG+ L+ K G+ C E K+YG V G G+ +
Sbjct: 19 PGPTPLPFLGNILSYHK-----GF----CMFDMECHKKYGKVWGFYDGQQPVLAITDPDM 69
Query: 92 IKEMLSKEEF----DGRPRGP---------FYETRTWGKRQGLMEGTVTAKVLSSL 134
IK +L KE + + RP GP E W + + L+ T T+ L +
Sbjct: 70 IKTVLVKECYSVFTNRRPFGPVGFMKSAISIAEDEEWKRLRSLLSPTFTSGKLKEM 125
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 150/340 (44%), Gaps = 21/340 (6%)
Query: 490 PFGAGPDRLLVTDEQLWVEQRRFVLRQLREFGFGK-RTMAQLVEEEAYQLVQLFKQEVQD 548
P G + + +++ W R + F GK + M ++ + LV+ ++E +
Sbjct: 89 PVGFMKSAISIAEDEEWKRLRSLLSPT---FTSGKLKEMVPIIAQYGDVLVRNLRREAET 145
Query: 549 GGAIIPMRDAFSVPVLNTLWSMLAGIRY----SPEDKELKKIQSLLTELFANIDMVGALF 604
G + ++D F ++ + S G+ +P+D ++ + LL D + F
Sbjct: 146 GKPVT-LKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKLL-----RFDFLDPFF 199
Query: 605 SQFPILRYVAPEMSGYKSFVSIHQKVWKFLRNELDNHKETFNPDEMRDIMDVYLKTLKSE 664
+ ++ P + V ++V FLR + KE+ D + +D + S+
Sbjct: 200 LSITVFPFLIPILEVLNICV-FPREVTNFLRKSVKRMKESRLEDTQKHRVDFLQLMIDSQ 258
Query: 665 DKTDT-----FSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVV 719
+ +T S+ +L+A + AG ETTS L F L HPDVQ+K Q EID V+
Sbjct: 259 NSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVL 318
Query: 720 GRDRLPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANF 779
P+ + M YL+ + E++R+F + +D + G FIPK +++
Sbjct: 319 PNKAPPTYDTVLQMEYLDMVVNETLRLF-PIAMRLERVCKKDVEINGMFIPKGVVVMIPS 377
Query: 780 NGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAG 819
+ D ++W +PE F PERF P Y PFG+G
Sbjct: 378 YALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPFGSG 417
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/367 (21%), Positives = 158/367 (43%), Gaps = 31/367 (8%)
Query: 171 KAGLLVTDEQLWVEQRRFVLRQLREFGFGK-RTMAQLVEEEAYQLVQLFKQEVQHLSLPG 229
K+ + + +++ W R + F GK + M ++ + LV+ ++E + G
Sbjct: 94 KSAISIAEDEEWKRLRSLLSPT---FTSGKLKEMVPIIAQYGDVLVRNLRREAET----G 146
Query: 230 AIIPMRDAFSVPVLNTLWSMLAGIRY----SPEDKELKKIQSLLTELFANIDMVGALFSQ 285
+ ++D F ++ + S G+ +P+D ++ + LL D + F
Sbjct: 147 KPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKLL-----RFDFLDPFFLS 201
Query: 286 FPILRYVAPEMSGYKSFVSIHQKVWKFLRNELDNHKETFNPDEMRDIMDVYLKTLKSEDK 345
+ ++ P + V ++V FLR + KE+ D + +D + S++
Sbjct: 202 ITVFPFLIPILEVLNICV-FPREVTNFLRKSVKRMKESRLEDTQKHRVDFLQLMIDSQNS 260
Query: 346 TDT-----FSESQLLAICMDMFMAGSETTTTLPS---RHVNSHDMIVCFYLNRYLTSSMY 397
+T S+ +L+A + AG ETT+++ S + +H V L + + +
Sbjct: 261 KETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHP-DVQQKLQEEIDAVLP 319
Query: 398 TRSRRS--LVQTLPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFN 455
++ + V + YL+ + E++R+F + +D + G FIPK +++
Sbjct: 320 NKAPPTYDTVLQMEYLDMVVNETLRLF-PIAMRLERVCKKDVEINGMFIPKGVVVMIPSY 378
Query: 456 GVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAGPDRLLVTDEQLWVEQRRFVLR 515
+ D ++W +PE F PERF P Y PFG+GP R + + + ++R
Sbjct: 379 ALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPFGSGP-RNCIGMRFALMNMKLALIR 437
Query: 516 QLREFGF 522
L+ F F
Sbjct: 438 VLQNFSF 444
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 47/116 (40%), Gaps = 25/116 (21%)
Query: 35 PGPDWIPILGSALAIQKLRNQTGYLYQAC---AELSKQYGPVVGLRVGKDRQVVCFGYPA 91
PGP +P LG+ L+ K G+ C E K+YG V G G+ +
Sbjct: 18 PGPTPLPFLGNILSYHK-----GF----CMFDMECHKKYGKVWGFYDGQQPVLAITDPDM 68
Query: 92 IKEMLSKEEF----DGRPRGP---------FYETRTWGKRQGLMEGTVTAKVLSSL 134
IK +L KE + + RP GP E W + + L+ T T+ L +
Sbjct: 69 IKTVLVKECYSVFTNRRPFGPVGFMKSAISIAEDEEWKRLRSLLSPTFTSGKLKEM 124
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 150/340 (44%), Gaps = 21/340 (6%)
Query: 490 PFGAGPDRLLVTDEQLWVEQRRFVLRQLREFGFGK-RTMAQLVEEEAYQLVQLFKQEVQD 548
P G + + +++ W R + F GK + M ++ + LV+ ++E +
Sbjct: 88 PVGFMKSAISIAEDEEWKRLRSLLSPT---FTSGKLKEMVPIIAQYGDVLVRNLRREAET 144
Query: 549 GGAIIPMRDAFSVPVLNTLWSMLAGIRY----SPEDKELKKIQSLLTELFANIDMVGALF 604
G + ++D F ++ + S G+ +P+D ++ + LL D + F
Sbjct: 145 GKPVT-LKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKLL-----RFDFLDPFF 198
Query: 605 SQFPILRYVAPEMSGYKSFVSIHQKVWKFLRNELDNHKETFNPDEMRDIMDVYLKTLKSE 664
+ ++ P + V ++V FLR + KE+ D + +D + S+
Sbjct: 199 LSITVFPFLIPILEVLNICV-FPREVTNFLRKSVKRMKESRLEDTQKHRVDFLQLMIDSQ 257
Query: 665 DKTDT-----FSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVV 719
+ +T S+ +L+A + AG ETTS L F L HPDVQ+K Q EID V+
Sbjct: 258 NSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVL 317
Query: 720 GRDRLPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANF 779
P+ + M YL+ + E++R+F + +D + G FIPK +++
Sbjct: 318 PNKAPPTYDTVLQMEYLDMVVNETLRLF-PIAMRLERVCKKDVEINGMFIPKGVVVMIPS 376
Query: 780 NGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAG 819
+ D ++W +PE F PERF P Y PFG+G
Sbjct: 377 YALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPFGSG 416
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/367 (21%), Positives = 158/367 (43%), Gaps = 31/367 (8%)
Query: 171 KAGLLVTDEQLWVEQRRFVLRQLREFGFGK-RTMAQLVEEEAYQLVQLFKQEVQHLSLPG 229
K+ + + +++ W R + F GK + M ++ + LV+ ++E + G
Sbjct: 93 KSAISIAEDEEWKRLRSLLSPT---FTSGKLKEMVPIIAQYGDVLVRNLRREAET----G 145
Query: 230 AIIPMRDAFSVPVLNTLWSMLAGIRY----SPEDKELKKIQSLLTELFANIDMVGALFSQ 285
+ ++D F ++ + S G+ +P+D ++ + LL D + F
Sbjct: 146 KPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKLL-----RFDFLDPFFLS 200
Query: 286 FPILRYVAPEMSGYKSFVSIHQKVWKFLRNELDNHKETFNPDEMRDIMDVYLKTLKSEDK 345
+ ++ P + V ++V FLR + KE+ D + +D + S++
Sbjct: 201 ITVFPFLIPILEVLNICV-FPREVTNFLRKSVKRMKESRLEDTQKHRVDFLQLMIDSQNS 259
Query: 346 TDT-----FSESQLLAICMDMFMAGSETTTTLPS---RHVNSHDMIVCFYLNRYLTSSMY 397
+T S+ +L+A + AG ETT+++ S + +H V L + + +
Sbjct: 260 KETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHP-DVQQKLQEEIDAVLP 318
Query: 398 TRSRRS--LVQTLPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFN 455
++ + V + YL+ + E++R+F + +D + G FIPK +++
Sbjct: 319 NKAPPTYDTVLQMEYLDMVVNETLRLF-PIAMRLERVCKKDVEINGMFIPKGVVVMIPSY 377
Query: 456 GVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAGPDRLLVTDEQLWVEQRRFVLR 515
+ D ++W +PE F PERF P Y PFG+GP R + + + ++R
Sbjct: 378 ALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPFGSGP-RNCIGMRFALMNMKLALIR 436
Query: 516 QLREFGF 522
L+ F F
Sbjct: 437 VLQNFSF 443
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 47/116 (40%), Gaps = 25/116 (21%)
Query: 35 PGPDWIPILGSALAIQKLRNQTGYLYQAC---AELSKQYGPVVGLRVGKDRQVVCFGYPA 91
PGP +P LG+ L+ K G+ C E K+YG V G G+ +
Sbjct: 17 PGPTPLPFLGNILSYHK-----GF----CMFDMECHKKYGKVWGFYDGQQPVLAITDPDM 67
Query: 92 IKEMLSKEEF----DGRPRGP---------FYETRTWGKRQGLMEGTVTAKVLSSL 134
IK +L KE + + RP GP E W + + L+ T T+ L +
Sbjct: 68 IKTVLVKECYSVFTNRRPFGPVGFMKSAISIAEDEEWKRLRSLLSPTFTSGKLKEM 123
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 96/197 (48%), Gaps = 21/197 (10%)
Query: 630 VWKFLRNELDNHKETFNPDEMRDIM-DVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSE 688
++K ++ +DN + ++ D + D+Y + D S+ +L A ++ +A E
Sbjct: 246 IFKSVKPCIDNRLQRYSQQPGADFLCDIY--------QQDHLSKKELYAAVTELQLAAVE 297
Query: 689 TTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYESVRV-- 746
TT+ SL + L +P Q++ E+ V+ ++ P D +MPYL+A ES+R+
Sbjct: 298 TTANSLMWILYNLSRNPQAQRRLLQEVQSVLPDNQTPRAEDLRNMPYLKACLKESMRLTP 357
Query: 747 ---FMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERFLND 803
F RT P T L Y +PK T++ N + ++ + D FRPER+L
Sbjct: 358 SVPFTTRTLDKP------TVLGEYALPKGTVLTLNTQVLGSSEDNFEDSHKFRPERWLQK 411
Query: 804 KGAIQVPDQYLPFGAGR 820
+ I P +LPFG G+
Sbjct: 412 EKKIN-PFAHLPFGIGK 427
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 91/210 (43%), Gaps = 53/210 (25%)
Query: 309 VWKFLRNELDNHKETFNPDEMRDIM-DVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSE 367
++K ++ +DN + ++ D + D+Y + D S+ +L A ++ +A E
Sbjct: 246 IFKSVKPCIDNRLQRYSQQPGADFLCDIY--------QQDHLSKKELYAAVTELQLAAVE 297
Query: 368 TTTTLPSRHVNSHDMIVCFYLNRYLTSSMYTRSRRSLVQ------------------TLP 409
TT NS M + + L+R +++R L+Q +P
Sbjct: 298 TT-------ANSL-MWILYNLSRN------PQAQRRLLQEVQSVLPDNQTPRAEDLRNMP 343
Query: 410 YLEAITYESVRV-----FMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFW 464
YL+A ES+R+ F RT P T L Y +PK T++ N + ++ +
Sbjct: 344 YLKACLKESMRLTPSVPFTTRTLDKP------TVLGEYALPKGTVLTLNTQVLGSSEDNF 397
Query: 465 HDPEVFRPERFLNDKGAIQVPDQYLPFGAG 494
D FRPER+L + I P +LPFG G
Sbjct: 398 EDSHKFRPERWLQKEKKIN-PFAHLPFGIG 426
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 14/112 (12%)
Query: 35 PGPDWIPILGSALAI---QKLRNQTGYLYQACAELSKQYGPVVGLRVGKDRQVVCFGYPA 91
PGP P+LGS L I L+ Q + AE K+YG + +++G V G P+
Sbjct: 27 PGPTNWPLLGSLLEIFWKGGLKKQ----HDTLAEYHKKYGQIFRMKLG-SFDSVHLGSPS 81
Query: 92 IKEMLSKEE------FDGRPRGPFYETRTWGKRQGLMEGTVTAKVLSSLKRR 137
+ E L + E + +P + + R ++EG +V S+ +++
Sbjct: 82 LLEALYRTESAHPQRLEIKPWKAYRDHRNEAYGLMILEGQEWQRVRSAFQKK 133
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 138/322 (42%), Gaps = 30/322 (9%)
Query: 506 WVEQRRFVLRQLREFGFGKRTMAQLVE---EEAYQLVQLFKQEVQDGGAIIPMRDAFSVP 562
W +QRR + + F + ++ L+E E+A QLV++ + + DG + M+D +
Sbjct: 86 WHKQRRVI-----DLAFSRSSLVSLMETFNEKAEQLVEILEAKA-DGQTPVSMQDMLTYT 139
Query: 563 VLNTLWSMLAGIRYSPEDKELKKIQSLLTELFANIDMVGALFSQF-PILRYVAPEMSGYK 621
++ L G+ S K + + + I ++F P R E+
Sbjct: 140 AMDILAKAAFGMETSMLLGAQKPLSQAVKLMLEGITASRNTLAKFLPGKRKQLREVRESI 199
Query: 622 SFVSIHQKVWKFLRNELDNHKETFNPDEMRDIMDVYLKTLKSEDKTDTFSESQLLAICMD 681
F+ + W R E E D + + LK+E+ + LL +
Sbjct: 200 RFLRQVGRDWVQRRREALKRGEEVPAD-------ILTQILKAEEGAQ--DDEGLLDNFVT 250
Query: 682 MFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITY 741
F+AG ET++ L F + L P++ + QAE+D V+G R D + YL +
Sbjct: 251 FFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLDFEDLGRLQYLSQVLK 310
Query: 742 ESVRVF--MGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDK--EFWHDPEVFRP 797
ES+R++ TF + +T + G +P +T ++ F+ +M + ++ DP F P
Sbjct: 311 ESLRLYPPAWGTFRLLE---EETLIDGVRVPGNTPLL--FSTYVMGRMDTYFEDPLTFNP 365
Query: 798 ERFLNDKGAIQVPDQYLPFGAG 819
+RF GA + Y PF G
Sbjct: 366 DRF--GPGAPKPRFTYFPFSLG 385
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 79/176 (44%), Gaps = 9/176 (5%)
Query: 647 PDEMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPD 706
P D + + L +D S +L + + AG ET + +L L L H D
Sbjct: 218 PPSEEDALGILLAA--RDDNNQPLSLPELKDQILLLLFAGHETLTSALSSFCLLLGQHSD 275
Query: 707 VQKKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYESVRVF--MGRTFSIPHRALRDTTL 764
++++ + E +++ L + + MPYL+ + E +R+ +G F ++D
Sbjct: 276 IRERVRQEQNKLQLSQELTAETLK-KMPYLDQVLQEVLRLIPPVGGGF---RELIQDCQF 331
Query: 765 QGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPD-QYLPFGAG 819
QG+ PK ++ + D + + DPE F PERF D A P ++PFG G
Sbjct: 332 QGFHFPKGWLVSYQISQTHADPDLYPDPEKFDPERFTPDGSATHNPPFAHVPFGGG 387
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 84/209 (40%), Gaps = 28/209 (13%)
Query: 326 PDEMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVC 385
P D + + L +D S +L + + AG ET T+ S C
Sbjct: 218 PPSEEDALGILLAA--RDDNNQPLSLPELKDQILLLLFAGHETLTSALSS--------FC 267
Query: 386 FYLNRYLTSSMYTRSRRSLVQ-----------TLPYLEAITYESVRVF--MGRTFSIPHR 432
L ++ R ++ +Q +PYL+ + E +R+ +G F
Sbjct: 268 LLLGQHSDIRERVRQEQNKLQLSQELTAETLKKMPYLDQVLQEVLRLIPPVGGGF---RE 324
Query: 433 ALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPD-QYLPF 491
++D QG+ PK ++ + D + + DPE F PERF D A P ++PF
Sbjct: 325 LIQDCQFQGFHFPKGWLVSYQISQTHADPDLYPDPEKFDPERFTPDGSATHNPPFAHVPF 384
Query: 492 GAGPDRLLVTDEQLWVEQRRFVLRQLREF 520
G G R + E +E + F R +++F
Sbjct: 385 GGG-LRECLGKEFARLEMKLFATRLIQQF 412
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 84/173 (48%), Gaps = 10/173 (5%)
Query: 648 DEMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDV 707
+++ + MD + + +E + D E+ I ++M +A +T S SL F + HP+V
Sbjct: 270 EKLEECMDFATELILAEKRGDLTRENVNQCI-LEMLIAAPDTMSVSLFFMLFLIAKHPNV 328
Query: 708 QKKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGY 767
++ EI V+G +R ++D + +E YES+R + + +AL D + GY
Sbjct: 329 EEAIIKEIQTVIG-ERDIKIDDIQKLKVMENFIYESMR-YQPVVDLVMRKALEDDVIDGY 386
Query: 768 FIPKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYL-PFGAG 819
+ K T II N G + EF+ P F E F A VP +Y PFG G
Sbjct: 387 PVKKGTNIILNI-GRMHRLEFFPKPNEFTLENF-----AKNVPYRYFQPFGFG 433
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 80/175 (45%), Gaps = 8/175 (4%)
Query: 649 EMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQ 708
E D + ++ K + + + + + +AG ETTS L F +L+ +P V
Sbjct: 228 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVL 287
Query: 709 KKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYESVRVF-MGRTFSIPHRALRDTTLQG- 766
+KA E RV+ D +PS + Y+ + E++R++ FS+ A DT L G
Sbjct: 288 QKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL--YAKEDTVLGGE 344
Query: 767 YFIPKDTMIIANFNGVLMDKEFWHDP-EVFRPERFLNDKGAIQVPDQYLPFGAGR 820
Y + K ++ + DK W D E FRPERF N Q + PFG G+
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ--HAFKPFGNGQ 397
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 90/226 (39%), Gaps = 29/226 (12%)
Query: 328 EMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFY 387
E D + ++ K + + + + + +AG ETT+ L S ++
Sbjct: 228 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLS--------FALYF 279
Query: 388 L--NRYLTSSMYTRSRRSLVQTLP---------YLEAITYESVRVF-MGRTFSIPHRALR 435
L N ++ + R LV +P Y+ + E++R++ FS+ A
Sbjct: 280 LVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL--YAKE 337
Query: 436 DTTLQG-YFIPKDTMIIANFNGVLMDKEFWHDP-EVFRPERFLNDKGAIQVPDQYLPFGA 493
DT L G Y + K ++ + DK W D E FRPERF N Q + PFG
Sbjct: 338 DTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ--HAFKPFGN 395
Query: 494 GPDRLLVTDEQLWVEQRRFVL-RQLREFGFGKRTMAQLVEEEAYQL 538
G + +Q + + VL L+ F F T +L +E L
Sbjct: 396 G--QRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 80/175 (45%), Gaps = 8/175 (4%)
Query: 649 EMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQ 708
E D + ++ K + + + + + +AG ETTS L F +L+ +P V
Sbjct: 229 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVL 288
Query: 709 KKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYESVRVF-MGRTFSIPHRALRDTTLQG- 766
+KA E RV+ D +PS + Y+ + E++R++ FS+ A DT L G
Sbjct: 289 QKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL--YAKEDTVLGGE 345
Query: 767 YFIPKDTMIIANFNGVLMDKEFWHDP-EVFRPERFLNDKGAIQVPDQYLPFGAGR 820
Y + K ++ + DK W D E FRPERF N Q + PFG G+
Sbjct: 346 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ--HAFKPFGNGQ 398
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 90/226 (39%), Gaps = 29/226 (12%)
Query: 328 EMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFY 387
E D + ++ K + + + + + +AG ETT+ L S ++
Sbjct: 229 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLS--------FALYF 280
Query: 388 L--NRYLTSSMYTRSRRSLVQTLP---------YLEAITYESVRVF-MGRTFSIPHRALR 435
L N ++ + R LV +P Y+ + E++R++ FS+ A
Sbjct: 281 LVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL--YAKE 338
Query: 436 DTTLQG-YFIPKDTMIIANFNGVLMDKEFWHDP-EVFRPERFLNDKGAIQVPDQYLPFGA 493
DT L G Y + K ++ + DK W D E FRPERF N Q + PFG
Sbjct: 339 DTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ--HAFKPFGN 396
Query: 494 GPDRLLVTDEQLWVEQRRFVL-RQLREFGFGKRTMAQLVEEEAYQL 538
G + +Q + + VL L+ F F T +L +E L
Sbjct: 397 G--QRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 440
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 69/141 (48%), Gaps = 8/141 (5%)
Query: 683 FMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYE 742
+AG ETTS L F +L+ +P V +KA E RV+ D +PS + Y+ + E
Sbjct: 268 LIAGHETTSGLLSFTLYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNE 326
Query: 743 SVRVF-MGRTFSIPHRALRDTTLQG-YFIPKDTMIIANFNGVLMDKEFWHDP-EVFRPER 799
++R++ FS+ A DT L G Y + K I+ + DK W D E FRPER
Sbjct: 327 ALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDEIMVLIPQLHRDKTIWGDDVEEFRPER 384
Query: 800 FLNDKGAIQVPDQYLPFGAGR 820
F N Q + PFG G+
Sbjct: 385 FENPSAIPQ--HAFKPFGNGQ 403
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 79/192 (41%), Gaps = 29/192 (15%)
Query: 362 FMAGSETTTTLPSRHVNSHDMIVCFYL--NRYLTSSMYTRSRRSLVQTLP---------Y 410
+AG ETT+ L S ++L N ++ + R LV +P Y
Sbjct: 268 LIAGHETTSGLLS--------FTLYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKY 319
Query: 411 LEAITYESVRVF-MGRTFSIPHRALRDTTLQG-YFIPKDTMIIANFNGVLMDKEFWHDP- 467
+ + E++R++ FS+ A DT L G Y + K I+ + DK W D
Sbjct: 320 VGMVLNEALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDEIMVLIPQLHRDKTIWGDDV 377
Query: 468 EVFRPERFLNDKGAIQVPDQYLPFGAGPDRLLVTDEQLWVEQRRFVL-RQLREFGFGKRT 526
E FRPERF N Q + PFG G + +Q + + VL L+ F F T
Sbjct: 378 EEFRPERFENPSAIPQ--HAFKPFGNG--QRACIGQQFALHEATLVLGMMLKHFDFEDHT 433
Query: 527 MAQLVEEEAYQL 538
+L +E L
Sbjct: 434 NYELDIKETLTL 445
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 80/175 (45%), Gaps = 8/175 (4%)
Query: 649 EMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQ 708
E D + ++ K + + + + + +AG ETTS L F +L+ +P V
Sbjct: 228 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVL 287
Query: 709 KKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYESVRVF-MGRTFSIPHRALRDTTLQG- 766
+KA E RV+ D +PS + Y+ + E++R++ FS+ A DT L G
Sbjct: 288 QKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL--YAKEDTVLGGE 344
Query: 767 YFIPKDTMIIANFNGVLMDKEFWHDP-EVFRPERFLNDKGAIQVPDQYLPFGAGR 820
Y + K ++ + DK W D E FRPERF N Q + PFG G+
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ--HAFKPFGNGQ 397
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 90/226 (39%), Gaps = 29/226 (12%)
Query: 328 EMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFY 387
E D + ++ K + + + + + +AG ETT+ L S ++
Sbjct: 228 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLS--------FALYF 279
Query: 388 L--NRYLTSSMYTRSRRSLVQTLP---------YLEAITYESVRVF-MGRTFSIPHRALR 435
L N ++ + R LV +P Y+ + E++R++ FS+ A
Sbjct: 280 LVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL--YAKE 337
Query: 436 DTTLQG-YFIPKDTMIIANFNGVLMDKEFWHDP-EVFRPERFLNDKGAIQVPDQYLPFGA 493
DT L G Y + K ++ + DK W D E FRPERF N Q + PFG
Sbjct: 338 DTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ--HAFKPFGN 395
Query: 494 GPDRLLVTDEQLWVEQRRFVL-RQLREFGFGKRTMAQLVEEEAYQL 538
G + +Q + + VL L+ F F T +L +E L
Sbjct: 396 G--QRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 79/175 (45%), Gaps = 8/175 (4%)
Query: 649 EMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQ 708
E D + ++ K + + + + + AG E TS L F +L+ +P V
Sbjct: 229 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVL 288
Query: 709 KKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYESVRVF-MGRTFSIPHRALRDTTLQG- 766
+KA E RV+ D +PS + Y+ + E++R++ G FS+ A DT L G
Sbjct: 289 QKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTGPAFSL--YAKEDTVLGGE 345
Query: 767 YFIPKDTMIIANFNGVLMDKEFWHDP-EVFRPERFLNDKGAIQVPDQYLPFGAGR 820
Y + K ++ + DK W D E FRPERF N Q + PFG G+
Sbjct: 346 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ--HAFKPFGNGQ 398
Score = 37.7 bits (86), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 59/130 (45%), Gaps = 10/130 (7%)
Query: 405 VQTLPYLEAITYESVRVF-MGRTFSIPHRALRDTTLQG-YFIPKDTMIIANFNGVLMDKE 462
V+ L Y+ + E++R++ G FS+ A DT L G Y + K ++ + DK
Sbjct: 309 VKQLKYVGMVLNEALRLWPTGPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 366
Query: 463 FWHDP-EVFRPERFLNDKGAIQVPDQYLPFGAGPDRLLVTDEQLWVEQRRFVL-RQLREF 520
W D E FRPERF N Q + PFG G + +Q + + VL L+ F
Sbjct: 367 IWGDDVEEFRPERFENPSAIPQ--HAFKPFGNG--QRACIGQQFALHEATLVLGMMLKHF 422
Query: 521 GFGKRTMAQL 530
F T +L
Sbjct: 423 DFEDHTNYEL 432
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 80/175 (45%), Gaps = 8/175 (4%)
Query: 649 EMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQ 708
E D + ++ K + + + + + +AG ETTS L F +L+ +P V
Sbjct: 228 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVL 287
Query: 709 KKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYESVRVF-MGRTFSIPHRALRDTTLQG- 766
+KA E RV+ D +PS + Y+ + E++R++ FS+ A DT L G
Sbjct: 288 QKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL--YAKEDTVLGGE 344
Query: 767 YFIPKDTMIIANFNGVLMDKEFWHDP-EVFRPERFLNDKGAIQVPDQYLPFGAGR 820
Y + K ++ + DK W D E FRPERF N Q + PFG G+
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ--HAFKPFGNGQ 397
Score = 37.0 bits (84), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 90/226 (39%), Gaps = 29/226 (12%)
Query: 328 EMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFY 387
E D + ++ K + + + + + +AG ETT+ L S ++
Sbjct: 228 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLS--------FALYF 279
Query: 388 L--NRYLTSSMYTRSRRSLVQTLP---------YLEAITYESVRVF-MGRTFSIPHRALR 435
L N ++ + R LV +P Y+ + E++R++ FS+ A
Sbjct: 280 LVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL--YAKE 337
Query: 436 DTTLQG-YFIPKDTMIIANFNGVLMDKEFWHDP-EVFRPERFLNDKGAIQVPDQYLPFGA 493
DT L G Y + K ++ + DK W D E FRPERF N Q + PFG
Sbjct: 338 DTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ--HAFKPFGN 395
Query: 494 GPDRLLVTDEQLWVEQRRFVL-RQLREFGFGKRTMAQLVEEEAYQL 538
G + +Q + + VL L+ F F T +L +E L
Sbjct: 396 G--QRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 80/175 (45%), Gaps = 8/175 (4%)
Query: 649 EMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQ 708
E D + ++ K + + + + + +AG ETTS L F +L+ +P V
Sbjct: 231 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVL 290
Query: 709 KKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYESVRVF-MGRTFSIPHRALRDTTLQG- 766
+KA E RV+ D +PS + Y+ + E++R++ FS+ A DT L G
Sbjct: 291 QKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL--YAKEDTVLGGE 347
Query: 767 YFIPKDTMIIANFNGVLMDKEFWHDP-EVFRPERFLNDKGAIQVPDQYLPFGAGR 820
Y + K ++ + DK W D E FRPERF N Q + PFG G+
Sbjct: 348 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ--HAFKPFGNGQ 400
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 90/226 (39%), Gaps = 29/226 (12%)
Query: 328 EMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFY 387
E D + ++ K + + + + + +AG ETT+ L S ++
Sbjct: 231 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLS--------FALYF 282
Query: 388 L--NRYLTSSMYTRSRRSLVQTLP---------YLEAITYESVRVF-MGRTFSIPHRALR 435
L N ++ + R LV +P Y+ + E++R++ FS+ A
Sbjct: 283 LVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL--YAKE 340
Query: 436 DTTLQG-YFIPKDTMIIANFNGVLMDKEFWHDP-EVFRPERFLNDKGAIQVPDQYLPFGA 493
DT L G Y + K ++ + DK W D E FRPERF N Q + PFG
Sbjct: 341 DTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ--HAFKPFGN 398
Query: 494 GPDRLLVTDEQLWVEQRRFVL-RQLREFGFGKRTMAQLVEEEAYQL 538
G + +Q + + VL L+ F F T +L +E L
Sbjct: 399 G--QRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 442
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 69/141 (48%), Gaps = 8/141 (5%)
Query: 683 FMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYE 742
+AG ETTS L F +L+ +P V +KA E RV+ D +PS + Y+ + E
Sbjct: 262 LIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNE 320
Query: 743 SVRVF-MGRTFSIPHRALRDTTLQG-YFIPKDTMIIANFNGVLMDKEFWHDP-EVFRPER 799
++R++ FS+ A DT L G Y + K ++ + DK W D E FRPER
Sbjct: 321 ALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPER 378
Query: 800 FLNDKGAIQVPDQYLPFGAGR 820
F N Q + PFG G+
Sbjct: 379 FENPSAIPQ--HAFKPFGNGQ 397
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 79/192 (41%), Gaps = 29/192 (15%)
Query: 362 FMAGSETTTTLPSRHVNSHDMIVCFYL--NRYLTSSMYTRSRRSLVQTLP---------Y 410
+AG ETT+ L S ++L N ++ + R LV +P Y
Sbjct: 262 LIAGHETTSGLLS--------FALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKY 313
Query: 411 LEAITYESVRVF-MGRTFSIPHRALRDTTLQG-YFIPKDTMIIANFNGVLMDKEFWHDP- 467
+ + E++R++ FS+ A DT L G Y + K ++ + DK W D
Sbjct: 314 VGMVLNEALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDV 371
Query: 468 EVFRPERFLNDKGAIQVPDQYLPFGAGPDRLLVTDEQLWVEQRRFVL-RQLREFGFGKRT 526
E FRPERF N Q + PFG G + +Q + + VL L+ F F T
Sbjct: 372 EEFRPERFENPSAIPQ--HAFKPFGNG--QRACIGQQFALHEATLVLGMMLKHFDFEDHT 427
Query: 527 MAQLVEEEAYQL 538
+L +E L
Sbjct: 428 NYELDIKETLTL 439
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 80/175 (45%), Gaps = 8/175 (4%)
Query: 649 EMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQ 708
E D + ++ K + + + + + +AG ETTS L F +L+ +P V
Sbjct: 228 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVL 287
Query: 709 KKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYESVRVF-MGRTFSIPHRALRDTTLQG- 766
+KA E RV+ D +PS + Y+ + E++R++ FS+ A DT L G
Sbjct: 288 QKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL--YAKEDTVLGGE 344
Query: 767 YFIPKDTMIIANFNGVLMDKEFWHDP-EVFRPERFLNDKGAIQVPDQYLPFGAGR 820
Y + K ++ + DK W D E FRPERF N Q + PFG G+
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ--HAFKPFGNGQ 397
Score = 37.0 bits (84), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 90/226 (39%), Gaps = 29/226 (12%)
Query: 328 EMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFY 387
E D + ++ K + + + + + +AG ETT+ L S ++
Sbjct: 228 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLS--------FALYF 279
Query: 388 L--NRYLTSSMYTRSRRSLVQTLP---------YLEAITYESVRVF-MGRTFSIPHRALR 435
L N ++ + R LV +P Y+ + E++R++ FS+ A
Sbjct: 280 LVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL--YAKE 337
Query: 436 DTTLQG-YFIPKDTMIIANFNGVLMDKEFWHDP-EVFRPERFLNDKGAIQVPDQYLPFGA 493
DT L G Y + K ++ + DK W D E FRPERF N Q + PFG
Sbjct: 338 DTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ--HAFKPFGN 395
Query: 494 GPDRLLVTDEQLWVEQRRFVL-RQLREFGFGKRTMAQLVEEEAYQL 538
G + +Q + + VL L+ F F T +L +E L
Sbjct: 396 G--QRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 79/175 (45%), Gaps = 8/175 (4%)
Query: 649 EMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQ 708
E D + ++ K + + + + + AG E TS L F +L+ +P V
Sbjct: 228 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVL 287
Query: 709 KKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYESVRVF-MGRTFSIPHRALRDTTLQG- 766
+KA E RV+ D +PS + Y+ + E++R++ G FS+ A DT L G
Sbjct: 288 QKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTGPAFSL--YAKEDTVLGGE 344
Query: 767 YFIPKDTMIIANFNGVLMDKEFWHDP-EVFRPERFLNDKGAIQVPDQYLPFGAGR 820
Y + K ++ + DK W D E FRPERF N Q + PFG G+
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ--HAFKPFGNGQ 397
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 59/130 (45%), Gaps = 10/130 (7%)
Query: 405 VQTLPYLEAITYESVRVF-MGRTFSIPHRALRDTTLQG-YFIPKDTMIIANFNGVLMDKE 462
V+ L Y+ + E++R++ G FS+ A DT L G Y + K ++ + DK
Sbjct: 308 VKQLKYVGMVLNEALRLWPTGPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 365
Query: 463 FWHDP-EVFRPERFLNDKGAIQVPDQYLPFGAGPDRLLVTDEQLWVEQRRFVL-RQLREF 520
W D E FRPERF N Q + PFG G + +Q + + VL L+ F
Sbjct: 366 IWGDDVEEFRPERFENPSAIPQ--HAFKPFGNG--QRACIGQQFALHEATLVLGMMLKHF 421
Query: 521 GFGKRTMAQL 530
F T +L
Sbjct: 422 DFEDHTNYEL 431
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 80/175 (45%), Gaps = 8/175 (4%)
Query: 649 EMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQ 708
E D + ++ K + + + + + +AG ETTS L F +L+ +P V
Sbjct: 228 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVL 287
Query: 709 KKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYESVRVF-MGRTFSIPHRALRDTTLQG- 766
+KA E RV+ D +PS + Y+ + E++R++ FS+ A DT L G
Sbjct: 288 QKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL--YAKEDTVLGGE 344
Query: 767 YFIPKDTMIIANFNGVLMDKEFWHDP-EVFRPERFLNDKGAIQVPDQYLPFGAGR 820
Y + K ++ + DK W D E FRPERF N Q + PFG G+
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ--HAFKPFGNGQ 397
Score = 37.0 bits (84), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 90/226 (39%), Gaps = 29/226 (12%)
Query: 328 EMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFY 387
E D + ++ K + + + + + +AG ETT+ L S ++
Sbjct: 228 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLS--------FALYF 279
Query: 388 L--NRYLTSSMYTRSRRSLVQTLP---------YLEAITYESVRVF-MGRTFSIPHRALR 435
L N ++ + R LV +P Y+ + E++R++ FS+ A
Sbjct: 280 LVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL--YAKE 337
Query: 436 DTTLQG-YFIPKDTMIIANFNGVLMDKEFWHDP-EVFRPERFLNDKGAIQVPDQYLPFGA 493
DT L G Y + K ++ + DK W D E FRPERF N Q + PFG
Sbjct: 338 DTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ--HAFKPFGN 395
Query: 494 GPDRLLVTDEQLWVEQRRFVL-RQLREFGFGKRTMAQLVEEEAYQL 538
G + +Q + + VL L+ F F T +L +E L
Sbjct: 396 G--QRACEGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 69/141 (48%), Gaps = 8/141 (5%)
Query: 683 FMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYE 742
+AG ETTS L F +L+ +P V +KA E RV+ D +PS + Y+ + E
Sbjct: 262 LIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNE 320
Query: 743 SVRVF-MGRTFSIPHRALRDTTLQG-YFIPKDTMIIANFNGVLMDKEFWHDP-EVFRPER 799
++R++ FS+ A DT L G Y + K ++ + DK W D E FRPER
Sbjct: 321 ALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPER 378
Query: 800 FLNDKGAIQVPDQYLPFGAGR 820
F N Q + PFG G+
Sbjct: 379 FENPSAIPQ--HAFKPFGNGQ 397
Score = 37.0 bits (84), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 79/192 (41%), Gaps = 29/192 (15%)
Query: 362 FMAGSETTTTLPSRHVNSHDMIVCFYL--NRYLTSSMYTRSRRSLVQTLP---------Y 410
+AG ETT+ L S ++L N ++ + R LV +P Y
Sbjct: 262 LIAGHETTSGLLS--------FALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKY 313
Query: 411 LEAITYESVRVF-MGRTFSIPHRALRDTTLQG-YFIPKDTMIIANFNGVLMDKEFWHDP- 467
+ + E++R++ FS+ A DT L G Y + K ++ + DK W D
Sbjct: 314 VGMVLNEALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDV 371
Query: 468 EVFRPERFLNDKGAIQVPDQYLPFGAGPDRLLVTDEQLWVEQRRFVL-RQLREFGFGKRT 526
E FRPERF N Q + PFG G + +Q + + VL L+ F F T
Sbjct: 372 EEFRPERFENPSAIPQ--HAFKPFGNG--QRACIGQQFALHEATLVLGMMLKHFDFEDHT 427
Query: 527 MAQLVEEEAYQL 538
+L +E L
Sbjct: 428 NYELDIKETLTL 439
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 80/175 (45%), Gaps = 8/175 (4%)
Query: 649 EMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQ 708
E D + ++ K + + + + + +AG ETTS L F +L+ +P V
Sbjct: 229 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVL 288
Query: 709 KKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYESVRVF-MGRTFSIPHRALRDTTLQG- 766
+KA E RV+ D +PS + Y+ + E++R++ FS+ A DT L G
Sbjct: 289 QKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL--YAKEDTVLGGE 345
Query: 767 YFIPKDTMIIANFNGVLMDKEFWHDP-EVFRPERFLNDKGAIQVPDQYLPFGAGR 820
Y + K ++ + DK W D E FRPERF N Q + PFG G+
Sbjct: 346 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ--HAFKPFGNGQ 398
Score = 37.0 bits (84), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 90/226 (39%), Gaps = 29/226 (12%)
Query: 328 EMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFY 387
E D + ++ K + + + + + +AG ETT+ L S ++
Sbjct: 229 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLS--------FALYF 280
Query: 388 L--NRYLTSSMYTRSRRSLVQTLP---------YLEAITYESVRVF-MGRTFSIPHRALR 435
L N ++ + R LV +P Y+ + E++R++ FS+ A
Sbjct: 281 LVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL--YAKE 338
Query: 436 DTTLQG-YFIPKDTMIIANFNGVLMDKEFWHDP-EVFRPERFLNDKGAIQVPDQYLPFGA 493
DT L G Y + K ++ + DK W D E FRPERF N Q + PFG
Sbjct: 339 DTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ--HAFKPFGN 396
Query: 494 GPDRLLVTDEQLWVEQRRFVL-RQLREFGFGKRTMAQLVEEEAYQL 538
G + +Q + + VL L+ F F T +L +E L
Sbjct: 397 G--QRACPGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 440
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 80/175 (45%), Gaps = 8/175 (4%)
Query: 649 EMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQ 708
E D + ++ K + + + + + +AG ETTS L F +L+ +P V
Sbjct: 228 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVL 287
Query: 709 KKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYESVRVF-MGRTFSIPHRALRDTTLQG- 766
+KA E RV+ D +PS + Y+ + E++R++ FS+ A DT L G
Sbjct: 288 QKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL--YAKEDTVLGGE 344
Query: 767 YFIPKDTMIIANFNGVLMDKEFWHDP-EVFRPERFLNDKGAIQVPDQYLPFGAGR 820
Y + K ++ + DK W D E FRPERF N Q + PFG G+
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ--HAFKPFGNGQ 397
Score = 36.6 bits (83), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 90/226 (39%), Gaps = 29/226 (12%)
Query: 328 EMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFY 387
E D + ++ K + + + + + +AG ETT+ L S ++
Sbjct: 228 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLS--------FALYF 279
Query: 388 L--NRYLTSSMYTRSRRSLVQTLP---------YLEAITYESVRVF-MGRTFSIPHRALR 435
L N ++ + R LV +P Y+ + E++R++ FS+ A
Sbjct: 280 LVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL--YAKE 337
Query: 436 DTTLQG-YFIPKDTMIIANFNGVLMDKEFWHDP-EVFRPERFLNDKGAIQVPDQYLPFGA 493
DT L G Y + K ++ + DK W D E FRPERF N Q + PFG
Sbjct: 338 DTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ--HAFKPFGN 395
Query: 494 GPDRLLVTDEQLWVEQRRFVL-RQLREFGFGKRTMAQLVEEEAYQL 538
G + +Q + + VL L+ F F T +L +E L
Sbjct: 396 G--QRACIGKQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 80/175 (45%), Gaps = 8/175 (4%)
Query: 649 EMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQ 708
E D + ++ K + + + + + +AG ETTS L F +L+ +P V
Sbjct: 228 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVL 287
Query: 709 KKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYESVRVF-MGRTFSIPHRALRDTTLQG- 766
+KA E RV+ D +PS + Y+ + E++R++ FS+ A DT L G
Sbjct: 288 QKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL--YAKEDTVLGGE 344
Query: 767 YFIPKDTMIIANFNGVLMDKEFWHDP-EVFRPERFLNDKGAIQVPDQYLPFGAGR 820
Y + K ++ + DK W D E FRPERF N Q + PFG G+
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ--HAFKPFGNGQ 397
Score = 37.0 bits (84), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 90/226 (39%), Gaps = 29/226 (12%)
Query: 328 EMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFY 387
E D + ++ K + + + + + +AG ETT+ L S ++
Sbjct: 228 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLS--------FALYF 279
Query: 388 L--NRYLTSSMYTRSRRSLVQTLP---------YLEAITYESVRVF-MGRTFSIPHRALR 435
L N ++ + R LV +P Y+ + E++R++ FS+ A
Sbjct: 280 LVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL--YAKE 337
Query: 436 DTTLQG-YFIPKDTMIIANFNGVLMDKEFWHDP-EVFRPERFLNDKGAIQVPDQYLPFGA 493
DT L G Y + K ++ + DK W D E FRPERF N Q + PFG
Sbjct: 338 DTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ--HAFKPFGN 395
Query: 494 GPDRLLVTDEQLWVEQRRFVL-RQLREFGFGKRTMAQLVEEEAYQL 538
G + +Q + + VL L+ F F T +L +E L
Sbjct: 396 G--QRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 69/141 (48%), Gaps = 8/141 (5%)
Query: 683 FMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYE 742
+AG ETTS L F +L+ +P V +KA E RV+ D +PS + Y+ + E
Sbjct: 262 LIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNE 320
Query: 743 SVRVF-MGRTFSIPHRALRDTTLQG-YFIPKDTMIIANFNGVLMDKEFWHDP-EVFRPER 799
++R++ FS+ A DT L G Y + K ++ + DK W D E FRPER
Sbjct: 321 ALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPER 378
Query: 800 FLNDKGAIQVPDQYLPFGAGR 820
F N Q + PFG G+
Sbjct: 379 FENPSAIPQ--HAFKPFGNGQ 397
Score = 37.0 bits (84), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 79/192 (41%), Gaps = 29/192 (15%)
Query: 362 FMAGSETTTTLPSRHVNSHDMIVCFYL--NRYLTSSMYTRSRRSLVQTLP---------Y 410
+AG ETT+ L S ++L N ++ + R LV +P Y
Sbjct: 262 LIAGHETTSGLLS--------FALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKY 313
Query: 411 LEAITYESVRVF-MGRTFSIPHRALRDTTLQG-YFIPKDTMIIANFNGVLMDKEFWHDP- 467
+ + E++R++ FS+ A DT L G Y + K ++ + DK W D
Sbjct: 314 VGMVLNEALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDV 371
Query: 468 EVFRPERFLNDKGAIQVPDQYLPFGAGPDRLLVTDEQLWVEQRRFVL-RQLREFGFGKRT 526
E FRPERF N Q + PFG G + +Q + + VL L+ F F T
Sbjct: 372 EEFRPERFENPSAIPQ--HAFKPFGNG--QRACIGQQFALHEATLVLGMMLKHFDFEDHT 427
Query: 527 MAQLVEEEAYQL 538
+L +E L
Sbjct: 428 NYELDIKETLTL 439
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 80/175 (45%), Gaps = 8/175 (4%)
Query: 649 EMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQ 708
E D + ++ K + + + + + +AG ETTS L F +L+ +P V
Sbjct: 229 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVL 288
Query: 709 KKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYESVRVF-MGRTFSIPHRALRDTTLQG- 766
+KA E RV+ D +PS + Y+ + E++R++ FS+ A DT L G
Sbjct: 289 QKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL--YAKEDTVLGGE 345
Query: 767 YFIPKDTMIIANFNGVLMDKEFWHDP-EVFRPERFLNDKGAIQVPDQYLPFGAGR 820
Y + K ++ + DK W D E FRPERF N Q + PFG G+
Sbjct: 346 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ--HAFKPFGNGQ 398
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 90/226 (39%), Gaps = 29/226 (12%)
Query: 328 EMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFY 387
E D + ++ K + + + + + +AG ETT+ L S ++
Sbjct: 229 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLS--------FALYF 280
Query: 388 L--NRYLTSSMYTRSRRSLVQTLP---------YLEAITYESVRVF-MGRTFSIPHRALR 435
L N ++ + R LV +P Y+ + E++R++ FS+ A
Sbjct: 281 LVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL--YAKE 338
Query: 436 DTTLQG-YFIPKDTMIIANFNGVLMDKEFWHDP-EVFRPERFLNDKGAIQVPDQYLPFGA 493
DT L G Y + K ++ + DK W D E FRPERF N Q + PFG
Sbjct: 339 DTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ--HAFKPFGN 396
Query: 494 GPDRLLVTDEQLWVEQRRFVL-RQLREFGFGKRTMAQLVEEEAYQL 538
G + +Q + + VL L+ F F T +L +E L
Sbjct: 397 G--QRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 440
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 80/175 (45%), Gaps = 8/175 (4%)
Query: 649 EMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQ 708
E D + ++ K + + + + + +AG ETTS L F +L+ +P V
Sbjct: 231 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVL 290
Query: 709 KKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYESVRVF-MGRTFSIPHRALRDTTLQG- 766
+KA E RV+ D +PS + Y+ + E++R++ FS+ A DT L G
Sbjct: 291 QKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTSPAFSL--YAKEDTVLGGE 347
Query: 767 YFIPKDTMIIANFNGVLMDKEFWHDP-EVFRPERFLNDKGAIQVPDQYLPFGAGR 820
Y + K ++ + DK W D E FRPERF N Q + PFG G+
Sbjct: 348 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ--HAFKPFGNGQ 400
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 90/226 (39%), Gaps = 29/226 (12%)
Query: 328 EMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFY 387
E D + ++ K + + + + + +AG ETT+ L S ++
Sbjct: 231 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLS--------FALYF 282
Query: 388 L--NRYLTSSMYTRSRRSLVQTLP---------YLEAITYESVRVF-MGRTFSIPHRALR 435
L N ++ + R LV +P Y+ + E++R++ FS+ A
Sbjct: 283 LVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTSPAFSL--YAKE 340
Query: 436 DTTLQG-YFIPKDTMIIANFNGVLMDKEFWHDP-EVFRPERFLNDKGAIQVPDQYLPFGA 493
DT L G Y + K ++ + DK W D E FRPERF N Q + PFG
Sbjct: 341 DTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ--HAFKPFGN 398
Query: 494 GPDRLLVTDEQLWVEQRRFVL-RQLREFGFGKRTMAQLVEEEAYQL 538
G + +Q + + VL L+ F F T +L +E L
Sbjct: 399 G--QRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 442
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 69/141 (48%), Gaps = 8/141 (5%)
Query: 683 FMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYE 742
+AG ETTS L F +L+ +P V +KA E RV+ D +PS + Y+ + E
Sbjct: 263 LIAGHETTSGLLTFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNE 321
Query: 743 SVRVF-MGRTFSIPHRALRDTTLQG-YFIPKDTMIIANFNGVLMDKEFWHDP-EVFRPER 799
++R++ FS+ A DT L G Y + K ++ + DK W D E FRPER
Sbjct: 322 ALRIWPTAPAFSL--YAKEDTMLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPER 379
Query: 800 FLNDKGAIQVPDQYLPFGAGR 820
F N Q + PFG G+
Sbjct: 380 FENPSAIPQ--HAFKPFGNGQ 398
Score = 37.7 bits (86), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 79/192 (41%), Gaps = 29/192 (15%)
Query: 362 FMAGSETTTTLPSRHVNSHDMIVCFYL--NRYLTSSMYTRSRRSLVQTLP---------Y 410
+AG ETT+ L + ++L N ++ + R LV +P Y
Sbjct: 263 LIAGHETTSGLLT--------FALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKY 314
Query: 411 LEAITYESVRVF-MGRTFSIPHRALRDTTLQG-YFIPKDTMIIANFNGVLMDKEFWHDP- 467
+ + E++R++ FS+ A DT L G Y + K ++ + DK W D
Sbjct: 315 VGMVLNEALRIWPTAPAFSL--YAKEDTMLGGEYPLEKGDELMVLIPQLHRDKTVWGDDV 372
Query: 468 EVFRPERFLNDKGAIQVPDQYLPFGAGPDRLLVTDEQLWVEQRRFVL-RQLREFGFGKRT 526
E FRPERF N Q + PFG G + +Q + + VL L+ F F T
Sbjct: 373 EEFRPERFENPSAIPQ--HAFKPFGNG--QRACIGQQFALHEATLVLGMMLKHFDFEDHT 428
Query: 527 MAQLVEEEAYQL 538
+L EE L
Sbjct: 429 NYELDIEETLTL 440
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 80/175 (45%), Gaps = 8/175 (4%)
Query: 649 EMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQ 708
E D + ++ K + + + + + +AG ETTS L F +L+ +P V
Sbjct: 229 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVL 288
Query: 709 KKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYESVRVF-MGRTFSIPHRALRDTTLQG- 766
+KA E RV+ D +PS + Y+ + E++R++ FS+ A DT L G
Sbjct: 289 QKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPPFSL--YAKEDTVLGGE 345
Query: 767 YFIPKDTMIIANFNGVLMDKEFWHDP-EVFRPERFLNDKGAIQVPDQYLPFGAGR 820
Y + K ++ + DK W D E FRPERF N Q + PFG G+
Sbjct: 346 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ--HAFKPFGNGQ 398
Score = 36.6 bits (83), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 90/226 (39%), Gaps = 29/226 (12%)
Query: 328 EMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFY 387
E D + ++ K + + + + + +AG ETT+ L S ++
Sbjct: 229 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLS--------FALYF 280
Query: 388 L--NRYLTSSMYTRSRRSLVQTLP---------YLEAITYESVRVF-MGRTFSIPHRALR 435
L N ++ + R LV +P Y+ + E++R++ FS+ A
Sbjct: 281 LVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPPFSL--YAKE 338
Query: 436 DTTLQG-YFIPKDTMIIANFNGVLMDKEFWHDP-EVFRPERFLNDKGAIQVPDQYLPFGA 493
DT L G Y + K ++ + DK W D E FRPERF N Q + PFG
Sbjct: 339 DTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ--HAFKPFGN 396
Query: 494 GPDRLLVTDEQLWVEQRRFVL-RQLREFGFGKRTMAQLVEEEAYQL 538
G + +Q + + VL L+ F F T +L +E L
Sbjct: 397 G--QRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 440
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 8/141 (5%)
Query: 683 FMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYE 742
+AG ETTS L F +L+ +P V +K E RV+ D +PS + Y+ + E
Sbjct: 262 LIAGHETTSGLLSFALYFLVKNPHVLQKVAEEATRVL-VDPVPSYKQVKQLKYVGMVLNE 320
Query: 743 SVRVF-MGRTFSIPHRALRDTTLQG-YFIPKDTMIIANFNGVLMDKEFWHDP-EVFRPER 799
++R++ FS+ A DT L G Y + K ++ + DK W D E FRPER
Sbjct: 321 ALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDEVMVLIPQLHRDKTIWGDDVEEFRPER 378
Query: 800 FLNDKGAIQVPDQYLPFGAGR 820
F N Q + PFG G+
Sbjct: 379 FENPSAIPQ--HAFKPFGNGQ 397
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 80/192 (41%), Gaps = 29/192 (15%)
Query: 362 FMAGSETTTTLPSRHVNSHDMIVCFYL--NRYLTSSMYTRSRRSLVQTLP---------Y 410
+AG ETT+ L S ++L N ++ + + R LV +P Y
Sbjct: 262 LIAGHETTSGLLS--------FALYFLVKNPHVLQKVAEEATRVLVDPVPSYKQVKQLKY 313
Query: 411 LEAITYESVRVF-MGRTFSIPHRALRDTTLQG-YFIPKDTMIIANFNGVLMDKEFWHDP- 467
+ + E++R++ FS+ A DT L G Y + K ++ + DK W D
Sbjct: 314 VGMVLNEALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDEVMVLIPQLHRDKTIWGDDV 371
Query: 468 EVFRPERFLNDKGAIQVPDQYLPFGAGPDRLLVTDEQLWVEQRRFVL-RQLREFGFGKRT 526
E FRPERF N Q + PFG G + +Q + + VL L+ F F T
Sbjct: 372 EEFRPERFENPSAIPQ--HAFKPFGNG--QRACIGQQFALHEATLVLGMMLKHFDFEDHT 427
Query: 527 MAQLVEEEAYQL 538
+L +E L
Sbjct: 428 NYELDIKETLTL 439
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 69/141 (48%), Gaps = 8/141 (5%)
Query: 683 FMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYE 742
+AG E+TS L F +L+ +P V +KA E RV+ D +PS + Y+ + E
Sbjct: 263 LIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNE 321
Query: 743 SVRVF-MGRTFSIPHRALRDTTLQG-YFIPKDTMIIANFNGVLMDKEFWHDP-EVFRPER 799
++R++ FS+ A DT L G Y + K ++ + DK W D E FRPER
Sbjct: 322 ALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPER 379
Query: 800 FLNDKGAIQVPDQYLPFGAGR 820
F N Q + PFG G+
Sbjct: 380 FENPSAIPQ--HAFKPFGNGQ 398
Score = 35.8 bits (81), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 76/184 (41%), Gaps = 29/184 (15%)
Query: 362 FMAGSETTTTLPSRHVNSHDMIVCFYL--NRYLTSSMYTRSRRSLVQTLP---------Y 410
+AG E+T+ L S ++L N ++ + R LV +P Y
Sbjct: 263 LIAGHESTSGLLS--------FALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKY 314
Query: 411 LEAITYESVRVF-MGRTFSIPHRALRDTTLQG-YFIPKDTMIIANFNGVLMDKEFWHDP- 467
+ + E++R++ FS+ A DT L G Y + K ++ + DK W D
Sbjct: 315 VGMVLNEALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDV 372
Query: 468 EVFRPERFLNDKGAIQVPDQYLPFGAGPDRLLVTDEQLWVEQRRFVL-RQLREFGFGKRT 526
E FRPERF N Q + PFG G + +Q + + VL L+ F F T
Sbjct: 373 EEFRPERFENPSAIPQ--HAFKPFGNG--QRACIGQQFALHEATLVLGMMLKHFDFEDHT 428
Query: 527 MAQL 530
+L
Sbjct: 429 NYEL 432
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 80/175 (45%), Gaps = 8/175 (4%)
Query: 649 EMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQ 708
E D + ++ K + + + + + +AG E+TS L F +L+ +P V
Sbjct: 228 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVL 287
Query: 709 KKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYESVRVF-MGRTFSIPHRALRDTTLQG- 766
+KA E RV+ D +PS + Y+ + E++R++ FS+ A DT L G
Sbjct: 288 QKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL--YAKEDTVLGGE 344
Query: 767 YFIPKDTMIIANFNGVLMDKEFWHDP-EVFRPERFLNDKGAIQVPDQYLPFGAGR 820
Y + K ++ + DK W D E FRPERF N Q + PFG G+
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ--HAFKPFGNGQ 397
Score = 36.2 bits (82), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 93/233 (39%), Gaps = 33/233 (14%)
Query: 328 EMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFY 387
E D + ++ K + + + + + +AG E+T+ L S ++
Sbjct: 228 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHESTSGLLS--------FALYF 279
Query: 388 L--NRYLTSSMYTRSRRSLVQTLP---------YLEAITYESVRVF-MGRTFSIPHRALR 435
L N ++ + R LV +P Y+ + E++R++ FS+ A
Sbjct: 280 LVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL--YAKE 337
Query: 436 DTTLQG-YFIPKDTMIIANFNGVLMDKEFWHDP-EVFRPERFLNDKGAIQVPDQYLPFGA 493
DT L G Y + K ++ + DK W D E FRPERF N Q + PFG
Sbjct: 338 DTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ--HAFKPFGN 395
Query: 494 GPDRLLVTDEQLWVEQRRFVL-RQLREFGFGKRTMAQLVEEEAYQLVQLFKQE 545
G + +Q + + VL L+ F F T +L +E QL K E
Sbjct: 396 G--QRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKE----TQLLKPE 442
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 69/141 (48%), Gaps = 8/141 (5%)
Query: 683 FMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYE 742
+AG ETTS L F +L+ +P V +KA E RV+ D +PS + Y+ + E
Sbjct: 262 LIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNE 320
Query: 743 SVRVF-MGRTFSIPHRALRDTTLQG-YFIPKDTMIIANFNGVLMDKEFWHDP-EVFRPER 799
++R++ FS+ A DT L G Y + K ++ + DK W D E FRPER
Sbjct: 321 ALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPER 378
Query: 800 FLNDKGAIQVPDQYLPFGAGR 820
F N Q + P+G G+
Sbjct: 379 FENPSAIPQ--HAFKPYGNGQ 397
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 79/192 (41%), Gaps = 29/192 (15%)
Query: 362 FMAGSETTTTLPSRHVNSHDMIVCFYL--NRYLTSSMYTRSRRSLVQTLP---------Y 410
+AG ETT+ L S ++L N ++ + R LV +P Y
Sbjct: 262 LIAGHETTSGLLS--------FALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKY 313
Query: 411 LEAITYESVRVF-MGRTFSIPHRALRDTTLQG-YFIPKDTMIIANFNGVLMDKEFWHDP- 467
+ + E++R++ FS+ A DT L G Y + K ++ + DK W D
Sbjct: 314 VGMVLNEALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDV 371
Query: 468 EVFRPERFLNDKGAIQVPDQYLPFGAGPDRLLVTDEQLWVEQRRFVL-RQLREFGFGKRT 526
E FRPERF N Q + P+G G + +Q + + VL L+ F F T
Sbjct: 372 EEFRPERFENPSAIPQ--HAFKPYGNG--QRACIGQQFALHEATLVLGMMLKHFDFEDHT 427
Query: 527 MAQLVEEEAYQL 538
+L +E L
Sbjct: 428 NYELDIKETLTL 439
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 80/175 (45%), Gaps = 8/175 (4%)
Query: 649 EMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQ 708
E D + ++ K + + + + + +AG E+TS L F +L+ +P V
Sbjct: 228 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVL 287
Query: 709 KKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYESVRVF-MGRTFSIPHRALRDTTLQG- 766
+KA E RV+ D +PS + Y+ + E++R++ FS+ A DT L G
Sbjct: 288 QKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL--YAKEDTVLGGE 344
Query: 767 YFIPKDTMIIANFNGVLMDKEFWHDP-EVFRPERFLNDKGAIQVPDQYLPFGAGR 820
Y + K ++ + DK W D E FRPERF N Q + PFG G+
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ--HAFKPFGNGQ 397
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 87/218 (39%), Gaps = 29/218 (13%)
Query: 328 EMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFY 387
E D + ++ K + + + + + +AG E+T+ L S ++
Sbjct: 228 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHESTSGLLS--------FALYF 279
Query: 388 L--NRYLTSSMYTRSRRSLVQTLP---------YLEAITYESVRVF-MGRTFSIPHRALR 435
L N ++ + R LV +P Y+ + E++R++ FS+ A
Sbjct: 280 LVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL--YAKE 337
Query: 436 DTTLQG-YFIPKDTMIIANFNGVLMDKEFWHDP-EVFRPERFLNDKGAIQVPDQYLPFGA 493
DT L G Y + K ++ + DK W D E FRPERF N Q + PFG
Sbjct: 338 DTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ--HAFKPFGN 395
Query: 494 GPDRLLVTDEQLWVEQRRFVL-RQLREFGFGKRTMAQL 530
G + +Q + + VL L+ F F T +L
Sbjct: 396 G--QRACIGQQFALHEATLVLGMMLKHFDFEDHTNYEL 431
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 79/175 (45%), Gaps = 8/175 (4%)
Query: 649 EMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQ 708
E D + ++ K + + + + + + G ETTS L F +L+ +P V
Sbjct: 228 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLICGHETTSGLLSFALYFLVKNPHVL 287
Query: 709 KKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYESVRVF-MGRTFSIPHRALRDTTLQG- 766
+KA E RV+ D +PS + Y+ + E++R++ FS+ A DT L G
Sbjct: 288 QKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL--YAKEDTVLGGE 344
Query: 767 YFIPKDTMIIANFNGVLMDKEFWHDP-EVFRPERFLNDKGAIQVPDQYLPFGAGR 820
Y + K ++ + DK W D E FRPERF N Q + PFG G+
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ--HAFKPFGNGQ 397
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 89/226 (39%), Gaps = 29/226 (12%)
Query: 328 EMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFY 387
E D + ++ K + + + + + + G ETT+ L S ++
Sbjct: 228 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLICGHETTSGLLS--------FALYF 279
Query: 388 L--NRYLTSSMYTRSRRSLVQTLP---------YLEAITYESVRVF-MGRTFSIPHRALR 435
L N ++ + R LV +P Y+ + E++R++ FS+ A
Sbjct: 280 LVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL--YAKE 337
Query: 436 DTTLQG-YFIPKDTMIIANFNGVLMDKEFWHDP-EVFRPERFLNDKGAIQVPDQYLPFGA 493
DT L G Y + K ++ + DK W D E FRPERF N Q + PFG
Sbjct: 338 DTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ--HAFKPFGN 395
Query: 494 GPDRLLVTDEQLWVEQRRFVL-RQLREFGFGKRTMAQLVEEEAYQL 538
G + +Q + + VL L+ F F T +L +E L
Sbjct: 396 G--QRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 80/175 (45%), Gaps = 8/175 (4%)
Query: 649 EMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQ 708
E D + ++ K + + + + + +AG ETTS L F +L+ +P V
Sbjct: 231 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVL 290
Query: 709 KKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYESVRVF-MGRTFSIPHRALRDTTLQG- 766
+KA E RV+ D +PS + Y+ + E++R++ FS+ A DT L G
Sbjct: 291 QKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTVPAFSL--YAKEDTVLGGE 347
Query: 767 YFIPKDTMIIANFNGVLMDKEFWHDP-EVFRPERFLNDKGAIQVPDQYLPFGAGR 820
Y + K ++ + DK W D E FRPERF N Q + PFG G+
Sbjct: 348 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ--HAFKPFGNGQ 400
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 90/226 (39%), Gaps = 29/226 (12%)
Query: 328 EMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFY 387
E D + ++ K + + + + + +AG ETT+ L S ++
Sbjct: 231 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLS--------FALYF 282
Query: 388 L--NRYLTSSMYTRSRRSLVQTLP---------YLEAITYESVRVF-MGRTFSIPHRALR 435
L N ++ + R LV +P Y+ + E++R++ FS+ A
Sbjct: 283 LVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTVPAFSL--YAKE 340
Query: 436 DTTLQG-YFIPKDTMIIANFNGVLMDKEFWHDP-EVFRPERFLNDKGAIQVPDQYLPFGA 493
DT L G Y + K ++ + DK W D E FRPERF N Q + PFG
Sbjct: 341 DTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ--HAFKPFGN 398
Query: 494 GPDRLLVTDEQLWVEQRRFVL-RQLREFGFGKRTMAQLVEEEAYQL 538
G + +Q + + VL L+ F F T +L +E L
Sbjct: 399 G--QRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 442
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 79/175 (45%), Gaps = 8/175 (4%)
Query: 649 EMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQ 708
E D + ++ K + + + + + +AG E TS L F +L+ +P V
Sbjct: 228 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHENTSGLLSFALYFLVKNPHVL 287
Query: 709 KKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYESVRVF-MGRTFSIPHRALRDTTLQG- 766
+KA E RV+ D +PS + Y+ + E++R++ FS+ A DT L G
Sbjct: 288 QKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL--YAKEDTVLGGE 344
Query: 767 YFIPKDTMIIANFNGVLMDKEFWHDP-EVFRPERFLNDKGAIQVPDQYLPFGAGR 820
Y + K ++ + DK W D E FRPERF N Q + PFG G+
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ--HAFKPFGNGQ 397
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 89/226 (39%), Gaps = 29/226 (12%)
Query: 328 EMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFY 387
E D + ++ K + + + + + +AG E T+ L S ++
Sbjct: 228 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHENTSGLLS--------FALYF 279
Query: 388 L--NRYLTSSMYTRSRRSLVQTLP---------YLEAITYESVRVF-MGRTFSIPHRALR 435
L N ++ + R LV +P Y+ + E++R++ FS+ A
Sbjct: 280 LVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL--YAKE 337
Query: 436 DTTLQG-YFIPKDTMIIANFNGVLMDKEFWHDP-EVFRPERFLNDKGAIQVPDQYLPFGA 493
DT L G Y + K ++ + DK W D E FRPERF N Q + PFG
Sbjct: 338 DTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ--HAFKPFGN 395
Query: 494 GPDRLLVTDEQLWVEQRRFVL-RQLREFGFGKRTMAQLVEEEAYQL 538
G + +Q + + VL L+ F F T +L +E L
Sbjct: 396 G--QRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 79/175 (45%), Gaps = 8/175 (4%)
Query: 649 EMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQ 708
E D + ++ K + + + + + +AG E TS L F +L+ +P V
Sbjct: 228 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVL 287
Query: 709 KKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYESVRVF-MGRTFSIPHRALRDTTLQG- 766
+KA E RV+ D +PS + Y+ + E++R++ FS+ A DT L G
Sbjct: 288 QKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL--YAKEDTVLGGE 344
Query: 767 YFIPKDTMIIANFNGVLMDKEFWHDP-EVFRPERFLNDKGAIQVPDQYLPFGAGR 820
Y + K ++ + DK W D E FRPERF N Q + PFG G+
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ--HAFKPFGNGQ 397
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 89/226 (39%), Gaps = 29/226 (12%)
Query: 328 EMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFY 387
E D + ++ K + + + + + +AG E T+ L S ++
Sbjct: 228 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEATSGLLS--------FALYF 279
Query: 388 L--NRYLTSSMYTRSRRSLVQTLP---------YLEAITYESVRVF-MGRTFSIPHRALR 435
L N ++ + R LV +P Y+ + E++R++ FS+ A
Sbjct: 280 LVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL--YAKE 337
Query: 436 DTTLQG-YFIPKDTMIIANFNGVLMDKEFWHDP-EVFRPERFLNDKGAIQVPDQYLPFGA 493
DT L G Y + K ++ + DK W D E FRPERF N Q + PFG
Sbjct: 338 DTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ--HAFKPFGN 395
Query: 494 GPDRLLVTDEQLWVEQRRFVL-RQLREFGFGKRTMAQLVEEEAYQL 538
G + +Q + + VL L+ F F T +L +E L
Sbjct: 396 G--QRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 8/141 (5%)
Query: 683 FMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYE 742
+AG E TS L F +L+ +P V +KA E RV+ D +PS + Y+ + E
Sbjct: 262 LIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNE 320
Query: 743 SVRVF-MGRTFSIPHRALRDTTLQG-YFIPKDTMIIANFNGVLMDKEFWHDP-EVFRPER 799
++R++ FS+ A DT L G Y + K ++ + DK W D E FRPER
Sbjct: 321 ALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPER 378
Query: 800 FLNDKGAIQVPDQYLPFGAGR 820
F N Q + PFG G+
Sbjct: 379 FENPSAIPQ--HAFKPFGNGQ 397
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 78/192 (40%), Gaps = 29/192 (15%)
Query: 362 FMAGSETTTTLPSRHVNSHDMIVCFYL--NRYLTSSMYTRSRRSLVQTLP---------Y 410
+AG E T+ L S ++L N ++ + R LV +P Y
Sbjct: 262 LIAGHEATSGLLS--------FALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKY 313
Query: 411 LEAITYESVRVF-MGRTFSIPHRALRDTTLQG-YFIPKDTMIIANFNGVLMDKEFWHDP- 467
+ + E++R++ FS+ A DT L G Y + K ++ + DK W D
Sbjct: 314 VGMVLNEALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDV 371
Query: 468 EVFRPERFLNDKGAIQVPDQYLPFGAGPDRLLVTDEQLWVEQRRFVL-RQLREFGFGKRT 526
E FRPERF N Q + PFG G + +Q + + VL L+ F F T
Sbjct: 372 EEFRPERFENPSAIPQ--HAFKPFGNG--QRACIGQQFALHEATLVLGMMLKHFDFEDHT 427
Query: 527 MAQLVEEEAYQL 538
+L +E L
Sbjct: 428 NYELDIKETLTL 439
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 8/141 (5%)
Query: 683 FMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYE 742
+AG E TS L F +L+ +P V +KA E RV+ D +PS + Y+ + E
Sbjct: 262 LIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNE 320
Query: 743 SVRVF-MGRTFSIPHRALRDTTLQG-YFIPKDTMIIANFNGVLMDKEFWHDP-EVFRPER 799
++R++ FS+ A DT L G Y + K ++ + DK W D E FRPER
Sbjct: 321 ALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPER 378
Query: 800 FLNDKGAIQVPDQYLPFGAGR 820
F N Q + PFG G+
Sbjct: 379 FENPSAIPQ--HAFKPFGNGQ 397
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 78/192 (40%), Gaps = 29/192 (15%)
Query: 362 FMAGSETTTTLPSRHVNSHDMIVCFYL--NRYLTSSMYTRSRRSLVQTLP---------Y 410
+AG E T+ L S ++L N ++ + R LV +P Y
Sbjct: 262 LIAGHEATSGLLS--------FALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKY 313
Query: 411 LEAITYESVRVF-MGRTFSIPHRALRDTTLQG-YFIPKDTMIIANFNGVLMDKEFWHDP- 467
+ + E++R++ FS+ A DT L G Y + K ++ + DK W D
Sbjct: 314 VGMVLNEALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDV 371
Query: 468 EVFRPERFLNDKGAIQVPDQYLPFGAGPDRLLVTDEQLWVEQRRFVL-RQLREFGFGKRT 526
E FRPERF N Q + PFG G + +Q + + VL L+ F F T
Sbjct: 372 EEFRPERFENPSAIPQ--HAFKPFGNG--QRACIGQQFALHEATLVLGMMLKHFDFEDHT 427
Query: 527 MAQLVEEEAYQL 538
+L +E L
Sbjct: 428 NYELDIKETLTL 439
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 79/175 (45%), Gaps = 8/175 (4%)
Query: 649 EMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQ 708
E D + ++ K + + + + + + G ETTS L F +L+ +P V
Sbjct: 228 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIKGHETTSGLLSFALYFLVKNPHVL 287
Query: 709 KKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYESVRVF-MGRTFSIPHRALRDTTLQG- 766
+KA E RV+ D +PS + Y+ + E++R++ FS+ A DT L G
Sbjct: 288 QKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL--YAKEDTVLGGE 344
Query: 767 YFIPKDTMIIANFNGVLMDKEFWHDP-EVFRPERFLNDKGAIQVPDQYLPFGAGR 820
Y + K ++ + DK W D E FRPERF N Q + PFG G+
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ--HAFKPFGNGQ 397
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 61/138 (44%), Gaps = 10/138 (7%)
Query: 405 VQTLPYLEAITYESVRVF-MGRTFSIPHRALRDTTLQG-YFIPKDTMIIANFNGVLMDKE 462
V+ L Y+ + E++R++ FS+ A DT L G Y + K ++ + DK
Sbjct: 308 VKQLKYVGMVLNEALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 365
Query: 463 FWHDP-EVFRPERFLNDKGAIQVPDQYLPFGAGPDRLLVTDEQLWVEQRRFVL-RQLREF 520
W D E FRPERF N Q + PFG G + +Q + + VL L+ F
Sbjct: 366 IWGDDVEEFRPERFENPSAIPQ--HAFKPFGNG--QRACIGQQFALHEATLVLGMMLKHF 421
Query: 521 GFGKRTMAQLVEEEAYQL 538
F T +L +E L
Sbjct: 422 DFEDHTNYELDIKETLTL 439
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 80/175 (45%), Gaps = 8/175 (4%)
Query: 649 EMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQ 708
E D + ++ K + + + + + +AG ETTS L F +L+ +P V
Sbjct: 228 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVL 287
Query: 709 KKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYESVRVF-MGRTFSIPHRALRDTTLQG- 766
+KA E RV+ D +PS + Y+ + E++R++ FS+ A DT L G
Sbjct: 288 QKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL--YAKEDTVLGGE 344
Query: 767 YFIPKDTMIIANFNGVLMDKEFWHDP-EVFRPERFLNDKGAIQVPDQYLPFGAGR 820
Y + K ++ + DK W D E FRPERF N Q + P+G G+
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ--HAFKPWGNGQ 397
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 90/226 (39%), Gaps = 29/226 (12%)
Query: 328 EMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFY 387
E D + ++ K + + + + + +AG ETT+ L S ++
Sbjct: 228 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLS--------FALYF 279
Query: 388 L--NRYLTSSMYTRSRRSLVQTLP---------YLEAITYESVRVF-MGRTFSIPHRALR 435
L N ++ + R LV +P Y+ + E++R++ FS+ A
Sbjct: 280 LVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL--YAKE 337
Query: 436 DTTLQG-YFIPKDTMIIANFNGVLMDKEFWHDP-EVFRPERFLNDKGAIQVPDQYLPFGA 493
DT L G Y + K ++ + DK W D E FRPERF N Q + P+G
Sbjct: 338 DTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ--HAFKPWGN 395
Query: 494 GPDRLLVTDEQLWVEQRRFVL-RQLREFGFGKRTMAQLVEEEAYQL 538
G + +Q + + VL L+ F F T +L +E L
Sbjct: 396 G--QRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 79/175 (45%), Gaps = 8/175 (4%)
Query: 649 EMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQ 708
E D + ++ K + + + + + + G ETTS L F +L+ +P V
Sbjct: 228 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIQGHETTSGLLSFALYFLVKNPHVL 287
Query: 709 KKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYESVRVF-MGRTFSIPHRALRDTTLQG- 766
+KA E RV+ D +PS + Y+ + E++R++ FS+ A DT L G
Sbjct: 288 QKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL--YAKEDTVLGGE 344
Query: 767 YFIPKDTMIIANFNGVLMDKEFWHDP-EVFRPERFLNDKGAIQVPDQYLPFGAGR 820
Y + K ++ + DK W D E FRPERF N Q + PFG G+
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ--HAFKPFGNGQ 397
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 61/138 (44%), Gaps = 10/138 (7%)
Query: 405 VQTLPYLEAITYESVRVF-MGRTFSIPHRALRDTTLQG-YFIPKDTMIIANFNGVLMDKE 462
V+ L Y+ + E++R++ FS+ A DT L G Y + K ++ + DK
Sbjct: 308 VKQLKYVGMVLNEALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 365
Query: 463 FWHDP-EVFRPERFLNDKGAIQVPDQYLPFGAGPDRLLVTDEQLWVEQRRFVL-RQLREF 520
W D E FRPERF N Q + PFG G + +Q + + VL L+ F
Sbjct: 366 IWGDDVEEFRPERFENPSAIPQ--HAFKPFGNG--QRACIGQQFALHEATLVLGMMLKHF 421
Query: 521 GFGKRTMAQLVEEEAYQL 538
F T +L +E L
Sbjct: 422 DFEDHTNYELDIKETLTL 439
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 79/175 (45%), Gaps = 8/175 (4%)
Query: 649 EMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQ 708
E D + ++ K + + + + + + G ETTS L F +L+ +P V
Sbjct: 228 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIEGHETTSGLLSFALYFLVKNPHVL 287
Query: 709 KKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYESVRVF-MGRTFSIPHRALRDTTLQG- 766
+KA E RV+ D +PS + Y+ + E++R++ FS+ A DT L G
Sbjct: 288 QKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL--YAKEDTVLGGE 344
Query: 767 YFIPKDTMIIANFNGVLMDKEFWHDP-EVFRPERFLNDKGAIQVPDQYLPFGAGR 820
Y + K ++ + DK W D E FRPERF N Q + PFG G+
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ--HAFKPFGNGQ 397
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 61/138 (44%), Gaps = 10/138 (7%)
Query: 405 VQTLPYLEAITYESVRVF-MGRTFSIPHRALRDTTLQG-YFIPKDTMIIANFNGVLMDKE 462
V+ L Y+ + E++R++ FS+ A DT L G Y + K ++ + DK
Sbjct: 308 VKQLKYVGMVLNEALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 365
Query: 463 FWHDP-EVFRPERFLNDKGAIQVPDQYLPFGAGPDRLLVTDEQLWVEQRRFVL-RQLREF 520
W D E FRPERF N Q + PFG G + +Q + + VL L+ F
Sbjct: 366 IWGDDVEEFRPERFENPSAIPQ--HAFKPFGNG--QRACIGQQFALHEATLVLGMMLKHF 421
Query: 521 GFGKRTMAQLVEEEAYQL 538
F T +L +E L
Sbjct: 422 DFEDHTNYELDIKETLTL 439
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 79/175 (45%), Gaps = 8/175 (4%)
Query: 649 EMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQ 708
E D + ++ K + + + + + + G ETTS L F +L+ +P V
Sbjct: 228 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIHGHETTSGLLSFALYFLVKNPHVL 287
Query: 709 KKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYESVRVF-MGRTFSIPHRALRDTTLQG- 766
+KA E RV+ D +PS + Y+ + E++R++ FS+ A DT L G
Sbjct: 288 QKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL--YAKEDTVLGGE 344
Query: 767 YFIPKDTMIIANFNGVLMDKEFWHDP-EVFRPERFLNDKGAIQVPDQYLPFGAGR 820
Y + K ++ + DK W D E FRPERF N Q + PFG G+
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ--HAFKPFGNGQ 397
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 61/138 (44%), Gaps = 10/138 (7%)
Query: 405 VQTLPYLEAITYESVRVF-MGRTFSIPHRALRDTTLQG-YFIPKDTMIIANFNGVLMDKE 462
V+ L Y+ + E++R++ FS+ A DT L G Y + K ++ + DK
Sbjct: 308 VKQLKYVGMVLNEALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 365
Query: 463 FWHDP-EVFRPERFLNDKGAIQVPDQYLPFGAGPDRLLVTDEQLWVEQRRFVL-RQLREF 520
W D E FRPERF N Q + PFG G + +Q + + VL L+ F
Sbjct: 366 IWGDDVEEFRPERFENPSAIPQ--HAFKPFGNG--QRACIGQQFALHEATLVLGMMLKHF 421
Query: 521 GFGKRTMAQLVEEEAYQL 538
F T +L +E L
Sbjct: 422 DFEDHTNYELDIKETLTL 439
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 79/175 (45%), Gaps = 8/175 (4%)
Query: 649 EMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQ 708
E D + ++ K + + + + + + G ETTS L F +L+ +P V
Sbjct: 228 EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIMGHETTSGLLSFALYFLVKNPHVL 287
Query: 709 KKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYESVRVF-MGRTFSIPHRALRDTTLQG- 766
+KA E RV+ D +PS + Y+ + E++R++ FS+ A DT L G
Sbjct: 288 QKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL--YAKEDTVLGGE 344
Query: 767 YFIPKDTMIIANFNGVLMDKEFWHDP-EVFRPERFLNDKGAIQVPDQYLPFGAGR 820
Y + K ++ + DK W D E FRPERF N Q + PFG G+
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ--HAFKPFGNGQ 397
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 61/138 (44%), Gaps = 10/138 (7%)
Query: 405 VQTLPYLEAITYESVRVF-MGRTFSIPHRALRDTTLQG-YFIPKDTMIIANFNGVLMDKE 462
V+ L Y+ + E++R++ FS+ A DT L G Y + K ++ + DK
Sbjct: 308 VKQLKYVGMVLNEALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 365
Query: 463 FWHDP-EVFRPERFLNDKGAIQVPDQYLPFGAGPDRLLVTDEQLWVEQRRFVL-RQLREF 520
W D E FRPERF N Q + PFG G + +Q + + VL L+ F
Sbjct: 366 IWGDDVEEFRPERFENPSAIPQ--HAFKPFGNG--QRACIGQQFALHEATLVLGMMLKHF 421
Query: 521 GFGKRTMAQLVEEEAYQL 538
F T +L +E L
Sbjct: 422 DFEDHTNYELDIKETLTL 439
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 8/141 (5%)
Query: 683 FMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYE 742
+AG ETTS L F +L+ +P V +KA E RV+ D +PS + Y+ + E
Sbjct: 262 LIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNE 320
Query: 743 SVRVF-MGRTFSIPHRALRDTTLQG-YFIPKDTMIIANFNGVLMDKEFWHDP-EVFRPER 799
++R++ FS+ A DT L G Y + K ++ + DK W D E FRPER
Sbjct: 321 ALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPER 378
Query: 800 FLNDKGAIQVPDQYLPFGAGR 820
F N Q + P G G+
Sbjct: 379 FENPSAIPQ--HAFKPHGNGQ 397
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 78/192 (40%), Gaps = 29/192 (15%)
Query: 362 FMAGSETTTTLPSRHVNSHDMIVCFYL--NRYLTSSMYTRSRRSLVQTLP---------Y 410
+AG ETT+ L S ++L N ++ + R LV +P Y
Sbjct: 262 LIAGHETTSGLLS--------FALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKY 313
Query: 411 LEAITYESVRVF-MGRTFSIPHRALRDTTLQG-YFIPKDTMIIANFNGVLMDKEFWHDP- 467
+ + E++R++ FS+ A DT L G Y + K ++ + DK W D
Sbjct: 314 VGMVLNEALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDV 371
Query: 468 EVFRPERFLNDKGAIQVPDQYLPFGAGPDRLLVTDEQLWVEQRRFVL-RQLREFGFGKRT 526
E FRPERF N Q + P G G + +Q + + VL L+ F F T
Sbjct: 372 EEFRPERFENPSAIPQ--HAFKPHGNG--QRACIGQQFALHEATLVLGMMLKHFDFEDHT 427
Query: 527 MAQLVEEEAYQL 538
+L +E L
Sbjct: 428 NYELDIKETLTL 439
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 8/141 (5%)
Query: 683 FMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYE 742
+AG ETTS L F +L+ +P V +KA E RV+ D +PS + Y+ + E
Sbjct: 262 LIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNE 320
Query: 743 SVRVF-MGRTFSIPHRALRDTTLQG-YFIPKDTMIIANFNGVLMDKEFWHDP-EVFRPER 799
++R++ FS+ A DT L G Y + K ++ + DK W D E FRPER
Sbjct: 321 ALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPER 378
Query: 800 FLNDKGAIQVPDQYLPFGAGR 820
F N Q + P G G+
Sbjct: 379 FENPSAIPQ--HAFKPAGNGQ 397
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 78/192 (40%), Gaps = 29/192 (15%)
Query: 362 FMAGSETTTTLPSRHVNSHDMIVCFYL--NRYLTSSMYTRSRRSLVQTLP---------Y 410
+AG ETT+ L S ++L N ++ + R LV +P Y
Sbjct: 262 LIAGHETTSGLLS--------FALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKY 313
Query: 411 LEAITYESVRVF-MGRTFSIPHRALRDTTLQG-YFIPKDTMIIANFNGVLMDKEFWHDP- 467
+ + E++R++ FS+ A DT L G Y + K ++ + DK W D
Sbjct: 314 VGMVLNEALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDV 371
Query: 468 EVFRPERFLNDKGAIQVPDQYLPFGAGPDRLLVTDEQLWVEQRRFVL-RQLREFGFGKRT 526
E FRPERF N Q + P G G + +Q + + VL L+ F F T
Sbjct: 372 EEFRPERFENPSAIPQ--HAFKPAGNG--QRACIGQQFALHEATLVLGMMLKHFDFEDHT 427
Query: 527 MAQLVEEEAYQL 538
+L +E L
Sbjct: 428 NYELDIKETLTL 439
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 94/226 (41%), Gaps = 9/226 (3%)
Query: 599 MVGALFSQFPILRYVAPEMSGYKSFVSIHQKVWKFLRNELDNH-KETFNPDEMRDIMDVY 657
MV AL LR P+ Y Q+ K + + +D + E D + +
Sbjct: 177 MVRALDEAMNKLRRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTH 236
Query: 658 LKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDR 717
+ K + + + + + AG E TS L F +L+ +P +KA E R
Sbjct: 237 MLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHELQKAAEEAAR 296
Query: 718 VVGRDRLPSLNDRPHMPYLEAITYESVRVF-MGRTFSIPHRALRDTTLQG-YFIPKDTMI 775
V+ D +PS + Y+ + E++R++ FS+ A DT L G Y + K +
Sbjct: 297 VL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDEL 353
Query: 776 IANFNGVLMDKEFWHDP-EVFRPERFLNDKGAIQVPDQYLPFGAGR 820
+ + DK W D E FRPERF N Q + PFG G+
Sbjct: 354 MVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ--HAFKPFGNGQ 397
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 61/138 (44%), Gaps = 10/138 (7%)
Query: 405 VQTLPYLEAITYESVRVF-MGRTFSIPHRALRDTTLQG-YFIPKDTMIIANFNGVLMDKE 462
V+ L Y+ + E++R++ FS+ A DT L G Y + K ++ + DK
Sbjct: 308 VKQLKYVGMVLNEALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 365
Query: 463 FWHDP-EVFRPERFLNDKGAIQVPDQYLPFGAGPDRLLVTDEQLWVEQRRFVL-RQLREF 520
W D E FRPERF N Q + PFG G + +Q + + VL L+ F
Sbjct: 366 IWGDDVEEFRPERFENPSAIPQ--HAFKPFGNG--QRACIGQQFALHEATLVLGMMLKHF 421
Query: 521 GFGKRTMAQLVEEEAYQL 538
F T +L +E L
Sbjct: 422 DFEDHTNYELDIKETLTL 439
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 82/183 (44%), Gaps = 27/183 (14%)
Query: 651 RDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKK 710
RD++DV L +K+E T FS ++ + + M AG T+S + + + L+ H D
Sbjct: 223 RDMLDV-LIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAA 281
Query: 711 AQAEIDRVVGRDRLPSLNDRPHMPYLEAITYESVR-----VFMGRTFSIPHRALRDTTLQ 765
E+D + G R S + +P LE + E++R + + R A + +Q
Sbjct: 282 VIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRV------AKGEFEVQ 335
Query: 766 GYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQ--------YLPFG 817
G+ I + ++ A+ E + DP F P R+ + P Q ++PFG
Sbjct: 336 GHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARY-------EQPRQEDLLNRWTWIPFG 388
Query: 818 AGR 820
AGR
Sbjct: 389 AGR 391
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 94/226 (41%), Gaps = 9/226 (3%)
Query: 599 MVGALFSQFPILRYVAPEMSGYKSFVSIHQKVWKFLRNELDNH-KETFNPDEMRDIMDVY 657
MV AL LR P+ Y Q+ K + + +D + E D + +
Sbjct: 178 MVRALDEAMNKLRRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTH 237
Query: 658 LKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDR 717
+ K + + + + + AG E TS L F +L+ +P +KA E R
Sbjct: 238 MLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHELQKAAEEAAR 297
Query: 718 VVGRDRLPSLNDRPHMPYLEAITYESVRVF-MGRTFSIPHRALRDTTLQG-YFIPKDTMI 775
V+ D +PS + Y+ + E++R++ FS+ A DT L G Y + K +
Sbjct: 298 VL-VDPVPSHKQVKQLKYVGMVLNEALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDEL 354
Query: 776 IANFNGVLMDKEFWHDP-EVFRPERFLNDKGAIQVPDQYLPFGAGR 820
+ + DK W D E FRPERF N Q + PFG G+
Sbjct: 355 MVLIPQLHRDKTVWGDDVEEFRPERFENPSAIPQ--HAFKPFGNGQ 398
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 61/138 (44%), Gaps = 10/138 (7%)
Query: 405 VQTLPYLEAITYESVRVF-MGRTFSIPHRALRDTTLQG-YFIPKDTMIIANFNGVLMDKE 462
V+ L Y+ + E++R++ FS+ A DT L G Y + K ++ + DK
Sbjct: 309 VKQLKYVGMVLNEALRLWPTAPAFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 366
Query: 463 FWHDP-EVFRPERFLNDKGAIQVPDQYLPFGAGPDRLLVTDEQLWVEQRRFVL-RQLREF 520
W D E FRPERF N Q + PFG G + +Q + + VL L+ F
Sbjct: 367 VWGDDVEEFRPERFENPSAIPQ--HAFKPFGNG--QRACIGQQFALHEATLVLGMMLKHF 422
Query: 521 GFGKRTMAQLVEEEAYQL 538
F T +L +E L
Sbjct: 423 DFEDHTNYELDIKETLTL 440
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 82/183 (44%), Gaps = 27/183 (14%)
Query: 651 RDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKK 710
RD++DV L +K+E T FS ++ + + M AG T+S + + + L+ H D
Sbjct: 223 RDMLDV-LIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAA 281
Query: 711 AQAEIDRVVGRDRLPSLNDRPHMPYLEAITYESVR-----VFMGRTFSIPHRALRDTTLQ 765
E+D + G R S + +P LE + E++R + + R A + +Q
Sbjct: 282 VIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRV------AKGEFEVQ 335
Query: 766 GYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQ--------YLPFG 817
G+ I + ++ A+ E + DP F P R+ + P Q ++PFG
Sbjct: 336 GHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARY-------EQPRQEDLLNRWTWIPFG 388
Query: 818 AGR 820
AGR
Sbjct: 389 AGR 391
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 82/183 (44%), Gaps = 27/183 (14%)
Query: 651 RDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKK 710
RD++DV L +K+E T FS ++ + + M AG T+S + + + L+ H D
Sbjct: 223 RDMLDV-LIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAA 281
Query: 711 AQAEIDRVVGRDRLPSLNDRPHMPYLEAITYESVR-----VFMGRTFSIPHRALRDTTLQ 765
E+D + G R S + +P LE + E++R + + R A + +Q
Sbjct: 282 VIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRV------AKGEFEVQ 335
Query: 766 GYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQ--------YLPFG 817
G+ I + ++ A+ E + DP F P R+ + P Q ++PFG
Sbjct: 336 GHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARY-------EQPRQEDLLNRWTWIPFG 388
Query: 818 AGR 820
AGR
Sbjct: 389 AGR 391
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 82/183 (44%), Gaps = 27/183 (14%)
Query: 651 RDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKK 710
RD++DV L +K+E T FS ++ + + M AG T+S + + + L+ H D
Sbjct: 223 RDMLDV-LIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAA 281
Query: 711 AQAEIDRVVGRDRLPSLNDRPHMPYLEAITYESVR-----VFMGRTFSIPHRALRDTTLQ 765
E+D + G R S + +P LE + E++R + + R A + +Q
Sbjct: 282 VIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRV------AKGEFEVQ 335
Query: 766 GYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQ--------YLPFG 817
G+ I + ++ A+ E + DP F P R+ + P Q ++PFG
Sbjct: 336 GHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARY-------EQPRQEDLLNRWTWIPFG 388
Query: 818 AGR 820
AGR
Sbjct: 389 AGR 391
>pdb|4AW3|A Chain A, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
pdb|4AW3|B Chain B, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
Length = 417
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 79/167 (47%), Gaps = 30/167 (17%)
Query: 655 DVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLL-HPDVQKKAQA 713
D+ +++ D+ D+ SE +LL + + + +AG E+T+ + F+YLL+ P+++++
Sbjct: 224 DLVSALVQARDQQDSLSEQELLDLAIGLLVAGYESTTTQIA-DFVYLLMTRPELRRQ--- 279
Query: 714 EIDRVVGRDRLPSLNDRPHMPYLEAITYESVR-VFMGRTFSIPHRALRDTTLQGYFIPKD 772
L DRP + + + E R V +G ++P A+ D TL+G I
Sbjct: 280 -------------LLDRPEL--IPSAVEELTRWVPLGVGTAVPRYAVEDVTLRGVTIRAG 324
Query: 773 TMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAG 819
++A+ D+ + D + +R P+Q+L FG G
Sbjct: 325 EPVLASTGAANRDQAQFPDADRIDVDR---------TPNQHLGFGHG 362
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 73/164 (44%), Gaps = 28/164 (17%)
Query: 334 DVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFYLNRYLT 393
D+ +++ D+ D+ SE +LL + + + +AG E+TTT I F YL
Sbjct: 224 DLVSALVQARDQQDSLSEQELLDLAIGLLVAGYESTTT----------QIADFV---YL- 269
Query: 394 SSMYTRS--RRSLVQTLPYLEAITYESVR-VFMGRTFSIPHRALRDTTLQGYFIPKDTMI 450
+ TR RR L+ + + E R V +G ++P A+ D TL+G I +
Sbjct: 270 --LMTRPELRRQLLDRPELIPSAVEELTRWVPLGVGTAVPRYAVEDVTLRGVTIRAGEPV 327
Query: 451 IANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAG 494
+A+ D+ + D + +R P+Q+L FG G
Sbjct: 328 LASTGAANRDQAQFPDADRIDVDR---------TPNQHLGFGHG 362
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 75/158 (47%), Gaps = 4/158 (2%)
Query: 664 EDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDR 723
+D D E ++ + + GSET + ++ + L HP+ + + E++ V G R
Sbjct: 253 DDNGDPIGEQEIHDQVVAILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVTG-GR 311
Query: 724 LPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVL 783
+ D + + + E++R+ + + RA+ ++ L GY IP II + +
Sbjct: 312 PVAFEDVRKLRHTGNVIVEAMRLRPA-VWVLTRRAVAESELGGYRIPAGADIIYSPYAIQ 370
Query: 784 MDKEFWHDPEVFRPERFLNDKGAIQVPDQYL-PFGAGR 820
D + + D F P+R+L ++ A VP + PF AG+
Sbjct: 371 RDPKSYDDNLEFDPDRWLPERAA-NVPKYAMKPFSAGK 407
Score = 33.1 bits (74), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 432 RALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYL-P 490
RA+ ++ L GY IP II + + D + + D F P+R+L ++ A VP + P
Sbjct: 344 RAVAESELGGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRWLPERAA-NVPKYAMKP 402
Query: 491 FGAG 494
F AG
Sbjct: 403 FSAG 406
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 81/195 (41%), Gaps = 31/195 (15%)
Query: 651 RDIMDVYLKTLK----SEDKTDT---------------FSESQLLAICMDMFMAGSETTS 691
R+I D++ K ++ S++K D ++ ++ + + + +AG T+S
Sbjct: 210 REIKDIFYKAIQKRRQSQEKIDDILQTLLDATYKDGRPLTDDEVAGMLIGLLLAGQHTSS 269
Query: 692 KSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDRLPSLNDR-PHMPYLEAITYESVRV---- 746
+ + +L +QKK E V G + P D+ + L+ E++R+
Sbjct: 270 TTSAWMGFFLARDKTLQKKCYLEQKTVCGENLPPLTYDQLKDLNLLDRCIKETLRLRPPI 329
Query: 747 -FMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKG 805
M R P T+ GY IP + + K+ W + F P+R+L D
Sbjct: 330 MIMMRMARTPQ------TVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQDNP 383
Query: 806 AIQVPDQYLPFGAGR 820
A Y+PFGAGR
Sbjct: 384 ASGEKFAYVPFGAGR 398
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 82/209 (39%), Gaps = 55/209 (26%)
Query: 330 RDIMDVYLKTLK----SEDKTDT---------------FSESQLLAICMDMFMAGSETTT 370
R+I D++ K ++ S++K D ++ ++ + + + +AG T++
Sbjct: 210 REIKDIFYKAIQKRRQSQEKIDDILQTLLDATYKDGRPLTDDEVAGMLIGLLLAGQHTSS 269
Query: 371 TLPSRHVNSHDMIVCFYLNR--YLTSSMYTRSRRSLVQTLPYLEAITYESVRVFMGRTFS 428
T + + F+L R L Y + + LP +TY+ ++ +
Sbjct: 270 TTSA--------WMGFFLARDKTLQKKCYLEQKTVCGENLP---PLTYDQLK-----DLN 313
Query: 429 IPHRALRDT------------------TLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVF 470
+ R +++T T+ GY IP + + K+ W + F
Sbjct: 314 LLDRCIKETLRLRPPIMIMMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDF 373
Query: 471 RPERFLNDKGAIQVPDQYLPFGAGPDRLL 499
P+R+L D A Y+PFGAG R +
Sbjct: 374 NPDRYLQDNPASGEKFAYVPFGAGRHRCI 402
>pdb|3ZSN|A Chain A, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|B Chain B, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|C Chain C, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
Length = 417
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 78/167 (46%), Gaps = 30/167 (17%)
Query: 655 DVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLL-HPDVQKKAQA 713
D+ +++ D+ D+ SE +LL + + + +AG E+T+ + F+YLL+ P+++++
Sbjct: 224 DLVSALVQARDQQDSLSEQELLDLAIGLLVAGYESTTTQIA-DFVYLLMTRPELRRQ--- 279
Query: 714 EIDRVVGRDRLPSLNDRPHMPYLEAITYESVR-VFMGRTFSIPHRALRDTTLQGYFIPKD 772
L DRP + + + E R V +G + P A+ D TL+G I
Sbjct: 280 -------------LLDRPEL--IPSAVEELTRWVPLGVGTAAPRYAVEDVTLRGVTIRAG 324
Query: 773 TMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAG 819
++A+ D+ + D + +R P+Q+L FG G
Sbjct: 325 EPVLASTGAANRDQAQFPDADRIDVDR---------TPNQHLGFGHG 362
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 72/164 (43%), Gaps = 28/164 (17%)
Query: 334 DVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFYLNRYLT 393
D+ +++ D+ D+ SE +LL + + + +AG E+TTT I F YL
Sbjct: 224 DLVSALVQARDQQDSLSEQELLDLAIGLLVAGYESTTT----------QIADFV---YL- 269
Query: 394 SSMYTRS--RRSLVQTLPYLEAITYESVR-VFMGRTFSIPHRALRDTTLQGYFIPKDTMI 450
+ TR RR L+ + + E R V +G + P A+ D TL+G I +
Sbjct: 270 --LMTRPELRRQLLDRPELIPSAVEELTRWVPLGVGTAAPRYAVEDVTLRGVTIRAGEPV 327
Query: 451 IANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAG 494
+A+ D+ + D + +R P+Q+L FG G
Sbjct: 328 LASTGAANRDQAQFPDADRIDVDR---------TPNQHLGFGHG 362
>pdb|2Y46|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|C Chain C, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y5N|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5N|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5Z|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|B Chain B, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|C Chain C, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y98|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In P21212 Space Group
pdb|2YGX|A Chain A, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|B Chain B, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|C Chain C, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|D Chain D, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YCA|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In P21212 Space Group
Length = 417
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 78/167 (46%), Gaps = 30/167 (17%)
Query: 655 DVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLL-HPDVQKKAQA 713
D+ +++ D+ D+ SE +LL + + + +AG E+T+ + F+YLL+ P+++++
Sbjct: 224 DLVSALVQARDQQDSLSEQELLDLAIGLLVAGYESTTTQIA-DFVYLLMTRPELRRQ--- 279
Query: 714 EIDRVVGRDRLPSLNDRPHMPYLEAITYESVR-VFMGRTFSIPHRALRDTTLQGYFIPKD 772
L DRP + + + E R V +G + P A+ D TL+G I
Sbjct: 280 -------------LLDRPEL--IPSAVEELTRWVPLGVGTAFPRYAVEDVTLRGVTIRAG 324
Query: 773 TMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAG 819
++A+ D+ + D + +R P+Q+L FG G
Sbjct: 325 EPVLASTGAANRDQAQFPDADRIDVDR---------TPNQHLGFGHG 362
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 72/164 (43%), Gaps = 28/164 (17%)
Query: 334 DVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFYLNRYLT 393
D+ +++ D+ D+ SE +LL + + + +AG E+TTT I F YL
Sbjct: 224 DLVSALVQARDQQDSLSEQELLDLAIGLLVAGYESTTT----------QIADFV---YL- 269
Query: 394 SSMYTRS--RRSLVQTLPYLEAITYESVR-VFMGRTFSIPHRALRDTTLQGYFIPKDTMI 450
+ TR RR L+ + + E R V +G + P A+ D TL+G I +
Sbjct: 270 --LMTRPELRRQLLDRPELIPSAVEELTRWVPLGVGTAFPRYAVEDVTLRGVTIRAGEPV 327
Query: 451 IANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAG 494
+A+ D+ + D + +R P+Q+L FG G
Sbjct: 328 LASTGAANRDQAQFPDADRIDVDR---------TPNQHLGFGHG 362
>pdb|3A4G|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Trigonal Crystal Form)
pdb|3A4H|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Orthorhombic Crystal Form)
Length = 411
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 58/142 (40%), Gaps = 22/142 (15%)
Query: 655 DVYLKTL--KSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQ 712
D L +L S++ D S+ +L+A+ M + +AG ETT +G G L LL HPD Q+K
Sbjct: 204 DALLSSLLAVSDEDGDRLSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHPD-QRKLL 262
Query: 713 AEIDRVVGRDRLPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHR-ALRDTTLQGYFIPK 771
AE P L + E F P R D T G IP
Sbjct: 263 AED------------------PSLISSAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPA 304
Query: 772 DTMIIANFNGVLMDKEFWHDPE 793
M++ D ++ +P+
Sbjct: 305 GEMVMLGLAAANRDADWMPEPD 326
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 53/138 (38%), Gaps = 18/138 (13%)
Query: 334 DVYLKTL--KSEDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFYLNRY 391
D L +L S++ D S+ +L+A+ M + +AG ETT L +
Sbjct: 204 DALLSSLLAVSDEDGDRLSQEELVAMAMLLLIAGHETTVNL---------------IGNG 248
Query: 392 LTSSMYTRSRRSLVQTLPYLEAITYESVRVFMGRTFSIPHR-ALRDTTLQGYFIPKDTMI 450
+ + + +R L+ P L + E F P R D T G IP M+
Sbjct: 249 VLALLTHPDQRKLLAEDPSLISSAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMV 308
Query: 451 IANFNGVLMDKEFWHDPE 468
+ D ++ +P+
Sbjct: 309 MLGLAAANRDADWMPEPD 326
>pdb|3NC3|A Chain A, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC3|B Chain B, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC5|A Chain A, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC5|B Chain B, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC6|A Chain A, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC6|B Chain B, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC7|A Chain A, Cyp134a1 2-Phenylimidazole Bound Structure
pdb|3NC7|B Chain B, Cyp134a1 2-Phenylimidazole Bound Structure
Length = 441
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 68/158 (43%), Gaps = 20/158 (12%)
Query: 663 SEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRD 722
SE + S+ +LA+ +++ +A +E K+L +LL +P+
Sbjct: 247 SEYEGMALSDKDILALILNVLLAATEPADKTLALMIYHLLNNPEQMNDV----------- 295
Query: 723 RLPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGV 782
L DR +P A E++R + IP + +DT + G I KDT++
Sbjct: 296 ----LADRSLVPRAIA---ETLR-YKPPVQLIPRQLSQDTVVGGMEIKKDTIVFCMIGAA 347
Query: 783 LMDKEFWHDPEVFRPERF-LNDKGAIQVPDQYLPFGAG 819
D E + P+VF R L K A ++L FG+G
Sbjct: 348 NRDPEAFEQPDVFNIHREDLGIKSAFSGAARHLAFGSG 385
Score = 37.0 bits (84), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 67/158 (42%), Gaps = 24/158 (15%)
Query: 342 SEDKTDTFSESQLLAICMDMFMAGSE---TTTTLPSRHV-NSHDMIVCFYLNRYLTSSMY 397
SE + S+ +LA+ +++ +A +E T L H+ N+ + + +R L
Sbjct: 247 SEYEGMALSDKDILALILNVLLAATEPADKTLALMIYHLLNNPEQMNDVLADRSLVP--- 303
Query: 398 TRSRRSLVQTLPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGV 457
R++ +TL Y + IP + +DT + G I KDT++
Sbjct: 304 ----RAIAETLRYKPPVQL------------IPRQLSQDTVVGGMEIKKDTIVFCMIGAA 347
Query: 458 LMDKEFWHDPEVFRPERF-LNDKGAIQVPDQYLPFGAG 494
D E + P+VF R L K A ++L FG+G
Sbjct: 348 NRDPEAFEQPDVFNIHREDLGIKSAFSGAARHLAFGSG 385
>pdb|3AWP|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g
Length = 415
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 71/176 (40%), Gaps = 30/176 (17%)
Query: 328 EMRDIMDV-------YLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSH 380
E+R + D +L + + + D +++ + I +GS T + H + H
Sbjct: 164 ELRALFDAAGSASPRHLWSRLARRRVDAWAKRIIEGIRAGSIGSGSGTAAYAIAWHRDRH 223
Query: 381 D-------------------MIVCFYLNRYLTSSMYTRS--RRSLVQTLPYLEAITYESV 419
D + + Y+ ++ ++ T S R +LVQ Y E E V
Sbjct: 224 DDLLSPHVAAVELVNVLRPTVAIAVYIT-FVAHALQTCSGIRAALVQQPDYAELFVQE-V 281
Query: 420 RVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERF 475
R F ++ RA +D +G P+ ++ + G D W DP+ FRPERF
Sbjct: 282 RRFYPFGPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERF 337
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%)
Query: 742 ESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERF 800
+ VR F ++ RA +D +G P+ ++ + G D W DP+ FRPERF
Sbjct: 279 QEVRRFYPFGPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERF 337
>pdb|3A4Z|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A50|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A51|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
Length = 411
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 57/142 (40%), Gaps = 22/142 (15%)
Query: 655 DVYLKTL--KSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQ 712
D L +L S+ D S+ +L+A+ M + +AG ETT +G G L LL HPD Q+K
Sbjct: 204 DALLSSLLAVSDMDGDRLSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHPD-QRKLL 262
Query: 713 AEIDRVVGRDRLPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHR-ALRDTTLQGYFIPK 771
AE P L + E F P R D T G IP
Sbjct: 263 AED------------------PSLISSAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPA 304
Query: 772 DTMIIANFNGVLMDKEFWHDPE 793
M++ D ++ +P+
Sbjct: 305 GEMVMLGLAAANRDADWMPEPD 326
Score = 30.4 bits (67), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 52/138 (37%), Gaps = 18/138 (13%)
Query: 334 DVYLKTL--KSEDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFYLNRY 391
D L +L S+ D S+ +L+A+ M + +AG ETT L +
Sbjct: 204 DALLSSLLAVSDMDGDRLSQEELVAMAMLLLIAGHETTVNL---------------IGNG 248
Query: 392 LTSSMYTRSRRSLVQTLPYLEAITYESVRVFMGRTFSIPHR-ALRDTTLQGYFIPKDTMI 450
+ + + +R L+ P L + E F P R D T G IP M+
Sbjct: 249 VLALLTHPDQRKLLAEDPSLISSAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMV 308
Query: 451 IANFNGVLMDKEFWHDPE 468
+ D ++ +P+
Sbjct: 309 MLGLAAANRDADWMPEPD 326
>pdb|3VM4|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) In Complex With
(R)-Ibuprophen
Length = 407
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 71/176 (40%), Gaps = 30/176 (17%)
Query: 328 EMRDIMDV-------YLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSH 380
E+R + D +L + + + D +++ + I +GS T + H + H
Sbjct: 156 ELRALFDAAGSASPRHLWSRLARRRVDAWAKRIIEGIRAGSIGSGSGTAAYAIAWHRDRH 215
Query: 381 D-------------------MIVCFYLNRYLTSSMYTRS--RRSLVQTLPYLEAITYESV 419
D + + Y+ ++ ++ T S R +LVQ Y E E V
Sbjct: 216 DDLLSPHVAAVELVNVLRPTVAIAVYIT-FVAHALQTCSGIRAALVQQPDYAELFVQE-V 273
Query: 420 RVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERF 475
R F ++ RA +D +G P+ ++ + G D W DP+ FRPERF
Sbjct: 274 RRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERF 329
Score = 37.0 bits (84), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%)
Query: 742 ESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERF 800
+ VR F ++ RA +D +G P+ ++ + G D W DP+ FRPERF
Sbjct: 271 QEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERF 329
>pdb|3VNO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant R241e
Length = 407
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 71/176 (40%), Gaps = 30/176 (17%)
Query: 328 EMRDIMDV-------YLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSH 380
E+R + D +L + + + D +++ + I +GS T + H + H
Sbjct: 156 ELRALFDAAGSASPRHLWSRLARRRVDAWAKRIIEGIRAGSIGSGSGTAAYAIAWHRDRH 215
Query: 381 D-------------------MIVCFYLNRYLTSSMYTRS--RRSLVQTLPYLEAITYESV 419
D + + Y+ ++ ++ T S R +LVQ Y E E V
Sbjct: 216 DDLLSPHVAAVELVNVLEPTVAIAVYIT-FVAHALQTCSGIRAALVQQPDYAELFVQE-V 273
Query: 420 RVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERF 475
R F ++ RA +D +G P+ ++ + G D W DP+ FRPERF
Sbjct: 274 RRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERF 329
Score = 37.0 bits (84), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%)
Query: 742 ESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERF 800
+ VR F ++ RA +D +G P+ ++ + G D W DP+ FRPERF
Sbjct: 271 QEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERF 329
>pdb|3AWQ|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f
Length = 415
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 71/176 (40%), Gaps = 30/176 (17%)
Query: 328 EMRDIMDV-------YLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSH 380
E+R + D +L + + + D +++ + I +GS T + H + H
Sbjct: 164 ELRALFDAAGSASPRHLWSRLARRRVDAWAKRIIEGIRAGSIGSGSGTAAYAIAWHRDRH 223
Query: 381 D-------------------MIVCFYLNRYLTSSMYTRS--RRSLVQTLPYLEAITYESV 419
D + + Y+ ++ ++ T S R +LVQ Y E E V
Sbjct: 224 DDLLSPHVAAVELVNVLRPTVAIAVYIT-FVAHALQTCSGIRAALVQQPDYAELFVQE-V 281
Query: 420 RVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERF 475
R F ++ RA +D +G P+ ++ + G D W DP+ FRPERF
Sbjct: 282 RRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERF 337
Score = 37.0 bits (84), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%)
Query: 742 ESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERF 800
+ VR F ++ RA +D +G P+ ++ + G D W DP+ FRPERF
Sbjct: 279 QEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERF 337
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 96/235 (40%), Gaps = 27/235 (11%)
Query: 276 IDMVGALFSQFPILRYVAPEMSGYKSFVSI----HQKVWKFLRNELDNHKETFNPD---- 327
ID V +F L V PE+ Y+ F + H W + N+ + + E F D
Sbjct: 196 IDAVYKMFHTSVPLLNVPPEL--YRLFRTKTWRDHVAAWDTIFNKAEKYTEIFYQDLRRK 253
Query: 328 -EMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCF 386
E R+ + LKSE + A +M G TT+ H+ ++M
Sbjct: 254 TEFRNYPGILYCLLKSE----KMLLEDVKANITEMLAGGVNTTSMTLQWHL--YEMARSL 307
Query: 387 YLNRYLTSSMYTRSRRS------LVQTLPYLEAITYESVRVFMGRTFSIPHRALRDTTLQ 440
+ L + R++ ++Q +P L+A E++R+ + ++ D LQ
Sbjct: 308 NVQEMLREEVLNARRQAEGDISKMLQMVPLLKASIKETLRLH-PISVTLQRYPESDLVLQ 366
Query: 441 GYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERFLN-DKGAIQVPDQYLPFGAG 494
Y IP T++ + D F+ P+ F P R+L+ DK I + L FG G
Sbjct: 367 DYLIPAKTLVQVAIYAMGRDPAFFSSPDKFDPTRWLSKDKDLIHFRN--LGFGWG 419
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 96/237 (40%), Gaps = 27/237 (11%)
Query: 597 IDMVGALFSQFPILRYVAPEMSGYKSFVSI----HQKVWKFLRNELDNHKETFNPD---- 648
ID V +F L V PE+ Y+ F + H W + N+ + + E F D
Sbjct: 196 IDAVYKMFHTSVPLLNVPPEL--YRLFRTKTWRDHVAAWDTIFNKAEKYTEIFYQDLRRK 253
Query: 649 -EMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDV 707
E R+ + LKSE + A +M G TTS +L + + +V
Sbjct: 254 TEFRNYPGILYCLLKSE----KMLLEDVKANITEMLAGGVNTTSMTLQWHLYEMARSLNV 309
Query: 708 QKKAQAEIDRVVGRDRLPSLNDRPHM----PYLEAITYESVRVFMGRTFSIPHRALRDTT 763
Q+ + E V R + D M P L+A E++R+ + ++ D
Sbjct: 310 QEMLREE----VLNARRQAEGDISKMLQMVPLLKASIKETLRLH-PISVTLQRYPESDLV 364
Query: 764 LQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERFLN-DKGAIQVPDQYLPFGAG 819
LQ Y IP T++ + D F+ P+ F P R+L+ DK I + L FG G
Sbjct: 365 LQDYLIPAKTLVQVAIYAMGRDPAFFSSPDKFDPTRWLSKDKDLIHFRN--LGFGWG 419
>pdb|3AWM|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With Palmitic
Acid
Length = 415
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 71/176 (40%), Gaps = 30/176 (17%)
Query: 328 EMRDIMDV-------YLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSH 380
E+R + D +L + + + D +++ + I +GS T + H + H
Sbjct: 164 ELRALFDAAGSASPRHLWSRLARRRVDAWAKRIIEGIRAGSIGSGSGTAAYAIAWHRDRH 223
Query: 381 D-------------------MIVCFYLNRYLTSSMYTRS--RRSLVQTLPYLEAITYESV 419
D + + Y+ ++ ++ T S R +LVQ Y E E V
Sbjct: 224 DDLLSPHVAAVELVNVLRPTVAIAVYIT-FVAHALQTCSGIRAALVQQPDYAELFVQE-V 281
Query: 420 RVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERF 475
R F ++ RA +D +G P+ ++ + G D W DP+ FRPERF
Sbjct: 282 RRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERF 337
Score = 37.0 bits (84), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%)
Query: 742 ESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERF 800
+ VR F ++ RA +D +G P+ ++ + G D W DP+ FRPERF
Sbjct: 279 QEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERF 337
>pdb|3VOO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant A245e
Length = 407
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 71/176 (40%), Gaps = 30/176 (17%)
Query: 328 EMRDIMDV-------YLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSH 380
E+R + D +L + + + D +++ + I +GS T + H + H
Sbjct: 156 ELRALFDAAGSASPRHLWSRLARRRVDAWAKRIIEGIRAGSIGSGSGTAAYAIAWHRDRH 215
Query: 381 DMI-------------------VCFYLNRYLTSSMYTRS--RRSLVQTLPYLEAITYESV 419
D + + Y+ ++ ++ T S R +LVQ Y E E V
Sbjct: 216 DDLLSPHVAAVELVNVLRPTVEIAVYIT-FVAHALQTCSGIRAALVQQPDYAELFVQE-V 273
Query: 420 RVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERF 475
R F ++ RA +D +G P+ ++ + G D W DP+ FRPERF
Sbjct: 274 RRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERF 329
Score = 37.0 bits (84), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%)
Query: 742 ESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERF 800
+ VR F ++ RA +D +G P+ ++ + G D W DP+ FRPERF
Sbjct: 271 QEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERF 329
>pdb|1UED|A Chain A, Crystal Structure Of Oxyc A Cytochrome P450 Implicated In
An Oxidative C-C Coupling Reaction During Vancomycin
Biosynthesis.
pdb|1UED|B Chain B, Crystal Structure Of Oxyc A Cytochrome P450 Implicated In
An Oxidative C-C Coupling Reaction During Vancomycin
Biosynthesis
Length = 406
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 52/135 (38%), Gaps = 18/135 (13%)
Query: 665 DKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDRL 724
D D ++ +L +C + + G ET + +GFG L LL +P Q E+
Sbjct: 225 DHGDNVTDEELKGLCTALILGGVETVAGMIGFGVLALLDNP-----GQIEL--------- 270
Query: 725 PSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLM 784
L + P E + E VR P A++D + G I ++ +
Sbjct: 271 --LFESPEKA--ERVVNELVRYLSPVQAPNPRLAIKDVVIDGQLIKAGDYVLCSILMANR 326
Query: 785 DKEFWHDPEVFRPER 799
D+ DP+V R
Sbjct: 327 DEALTPDPDVLDANR 341
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 76/179 (42%), Gaps = 25/179 (13%)
Query: 664 EDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVV-GRD 722
D TF + + + + A T + + ++ +P+ K A E+ R +
Sbjct: 247 NDTLSTFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAG 306
Query: 723 RLPSLNDRP---------HMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQ----GYFI 769
+ SL P +P L++I ES+R+ + +I A D TL Y I
Sbjct: 307 QKVSLEGNPICLSQAELNDLPVLDSIIKESLRL-SSASLNI-RTAKEDFTLHLEDGSYNI 364
Query: 770 PKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKG---------AIQVPDQYLPFGAG 819
KD +I + +D E + DP F+ +R+L++ G +++ Y+PFG+G
Sbjct: 365 RKDDIIALYPQLMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSG 423
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 19/116 (16%)
Query: 405 VQTLPYLEAITYESVRVFMGRTFSIPHRALRDTTLQ----GYFIPKDTMIIANFNGVLMD 460
+ LP L++I ES+R+ + +I A D TL Y I KD +I + +D
Sbjct: 323 LNDLPVLDSIIKESLRL-SSASLNI-RTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLD 380
Query: 461 KEFWHDPEVFRPERFLNDKG---------AIQVPDQYLPFGAG----PDRLLVTDE 503
E + DP F+ +R+L++ G +++ Y+PFG+G P RL E
Sbjct: 381 PEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHE 436
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 76/179 (42%), Gaps = 25/179 (13%)
Query: 664 EDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVV-GRD 722
D TF + + + + A T + + ++ +P+ K A E+ R +
Sbjct: 247 NDTLSTFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAG 306
Query: 723 RLPSLNDRP---------HMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQ----GYFI 769
+ SL P +P L++I ES+R+ + +I A D TL Y I
Sbjct: 307 QKVSLEGNPICLSQAELNDLPVLDSIIKESLRL-SSASLNI-RTAKEDFTLHLEDGSYNI 364
Query: 770 PKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKG---------AIQVPDQYLPFGAG 819
KD +I + +D E + DP F+ +R+L++ G +++ Y+PFG+G
Sbjct: 365 RKDDIIALYPQLMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSG 423
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 19/116 (16%)
Query: 405 VQTLPYLEAITYESVRVFMGRTFSIPHRALRDTTLQ----GYFIPKDTMIIANFNGVLMD 460
+ LP L++I ES+R+ + +I A D TL Y I KD +I + +D
Sbjct: 323 LNDLPVLDSIIKESLRL-SSASLNI-RTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLD 380
Query: 461 KEFWHDPEVFRPERFLNDKG---------AIQVPDQYLPFGAG----PDRLLVTDE 503
E + DP F+ +R+L++ G +++ Y+PFG+G P RL E
Sbjct: 381 PEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHE 436
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 23/144 (15%)
Query: 676 LAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDRLPSLNDRPHMPY 735
L+ + + +AG ET + +L + FL L PD QK+ + +
Sbjct: 212 LSEAVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAAL---------------- 255
Query: 736 LEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVF 795
A E++R++ + + R R L +P T ++ + + + + D E F
Sbjct: 256 --AAFQEALRLYPP-AWILTRRLERPLLLGEDRLPPGTTLV--LSPYVTQRLHFPDGEAF 310
Query: 796 RPERFLNDKGAIQVPDQYLPFGAG 819
RPERFL ++G +Y PFG G
Sbjct: 311 RPERFLEERGTPS--GRYFPFGLG 332
Score = 33.5 bits (75), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 5/50 (10%)
Query: 445 PKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAG 494
P T++++ + + + + D E FRPERFL ++G +Y PFG G
Sbjct: 288 PGTTLVLSPY---VTQRLHFPDGEAFRPERFLEERGTPS--GRYFPFGLG 332
>pdb|3TYW|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|C Chain C, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|D Chain D, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|4FXB|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
pdb|4FXB|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
Length = 417
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 49/121 (40%), Gaps = 20/121 (16%)
Query: 674 QLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDRLPSLNDRPHM 733
QLL+ AG ETT+ + L LL P++ + + + D
Sbjct: 238 QLLSTLGITINAGRETTTSMIALSTLLLLDRPELPAELRKDPD----------------- 280
Query: 734 PYLEAITYESVRVFMGRTFSIPHR-ALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDP 792
+ A E +RV + SIP R A D L G +P D +IA G D E + DP
Sbjct: 281 -LMPAAVDELLRV-LSVADSIPLRVAAEDIELSGRTVPADDGVIALLAGANHDPEQFDDP 338
Query: 793 E 793
E
Sbjct: 339 E 339
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 61/144 (42%), Gaps = 23/144 (15%)
Query: 676 LAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDRLPSLNDRPHMPY 735
L+ + + +AG ET + +L + FL L PD QK+ + + +
Sbjct: 212 LSEAVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAAL-------------AAF 258
Query: 736 LEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVF 795
EA+ + R P D QG T++++ + + + ++ + E F
Sbjct: 259 QEALRLYPPAWILTRRLERPLLLGEDRLPQG-----TTLVLSPY---VTQRLYFPEGEAF 310
Query: 796 RPERFLNDKGAIQVPDQYLPFGAG 819
+PERFL ++G +Y PFG G
Sbjct: 311 QPERFLAERGTPS--GRYFPFGLG 332
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Query: 444 IPKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAG 494
+P+ T ++ + + + ++ + E F+PERFL ++G +Y PFG G
Sbjct: 286 LPQGTTLV--LSPYVTQRLYFPEGEAFQPERFLAERGTPS--GRYFPFGLG 332
>pdb|2X5W|A Chain A, X-Ray Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125 In Complex With Substrate Cholest-4-En-3-One
Length = 440
Score = 37.0 bits (84), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 58/141 (41%), Gaps = 21/141 (14%)
Query: 655 DVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAE 714
D+ + ++++ + S+ + + + +AG+ETT S+ G + HPD Q E
Sbjct: 245 DIVTQLIQADIDGEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPD-----QWE 299
Query: 715 IDRVVGRDRLPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTM 774
+ + V RP E + + + RT ALRD L G I K
Sbjct: 300 LYKKV----------RPETAADEIVRWATPVTAFQRT------ALRDYELSGVQIKKGQR 343
Query: 775 IIANFNGVLMDKEFWHDPEVF 795
++ + D+E + DP F
Sbjct: 344 VVMFYRSANFDEEVFQDPFTF 364
>pdb|2XN8|A Chain A, X-Ray Structure Of The Substrate-Free Mycobacterium
Tuberculosis Cytochrome P450 Cyp125
Length = 423
Score = 37.0 bits (84), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 58/141 (41%), Gaps = 21/141 (14%)
Query: 655 DVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAE 714
D+ + ++++ + S+ + + + +AG+ETT S+ G + HPD Q E
Sbjct: 228 DIVTQLIQADIDGEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPD-----QWE 282
Query: 715 IDRVVGRDRLPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTM 774
+ + V RP E + + + RT ALRD L G I K
Sbjct: 283 LYKKV----------RPETAADEIVRWATPVTAFQRT------ALRDYELSGVQIKKGQR 326
Query: 775 IIANFNGVLMDKEFWHDPEVF 795
++ + D+E + DP F
Sbjct: 327 VVMFYRSANFDEEVFQDPFTF 347
>pdb|3IVY|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125, P212121 Crystal Form
pdb|3IW0|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125, C2221 Crystal Form
pdb|3IW1|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125 In Complex With Androstenedione
pdb|3IW2|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125 In Complex With Econazole
Length = 433
Score = 37.0 bits (84), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 58/141 (41%), Gaps = 21/141 (14%)
Query: 655 DVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAE 714
D+ + ++++ + S+ + + + +AG+ETT S+ G + HPD Q E
Sbjct: 238 DIVTQLIQADIDGEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPD-----QWE 292
Query: 715 IDRVVGRDRLPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTM 774
+ + V RP E + + + RT ALRD L G I K
Sbjct: 293 LYKKV----------RPETAADEIVRWATPVTAFQRT------ALRDYELSGVQIKKGQR 336
Query: 775 IIANFNGVLMDKEFWHDPEVF 795
++ + D+E + DP F
Sbjct: 337 VVMFYRSANFDEEVFQDPFTF 357
>pdb|2XC3|A Chain A, X-Ray Structure Of Mycobacterium Tuberculosis Cyp125 Bound
To The Reverse Type I Inhibitor
Length = 424
Score = 37.0 bits (84), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 58/141 (41%), Gaps = 21/141 (14%)
Query: 655 DVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAE 714
D+ + ++++ + S+ + + + +AG+ETT S+ G + HPD Q E
Sbjct: 229 DIVTQLIQADIDGEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPD-----QWE 283
Query: 715 IDRVVGRDRLPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTM 774
+ + V RP E + + + RT ALRD L G I K
Sbjct: 284 LYKKV----------RPETAADEIVRWATPVTAFQRT------ALRDYELSGVQIKKGQR 327
Query: 775 IIANFNGVLMDKEFWHDPEVF 795
++ + D+E + DP F
Sbjct: 328 VVMFYRSANFDEEVFQDPFTF 348
>pdb|2X5L|A Chain A, X-Ray Structure Of The Substrate-Free Mycobacterium
Tuberculosis Cytochrome P450 Cyp125, Alternative Crystal
Form
Length = 431
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 58/141 (41%), Gaps = 21/141 (14%)
Query: 655 DVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAE 714
D+ + ++++ + S+ + + + +AG+ETT S+ G + HPD Q E
Sbjct: 236 DIVTQLIQADIDGEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPD-----QWE 290
Query: 715 IDRVVGRDRLPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTM 774
+ + V RP E + + + RT ALRD L G I K
Sbjct: 291 LYKKV----------RPETAADEIVRWATPVTAFQRT------ALRDYELSGVQIKKGQR 334
Query: 775 IIANFNGVLMDKEFWHDPEVF 795
++ + D+E + DP F
Sbjct: 335 VVMFYRSANFDEEVFQDPFTF 355
>pdb|4APY|A Chain A, Ethylene Glycol-bound Form Of P450 Cyp125a3 From
Mycobacterium Smegmatis
Length = 433
Score = 36.6 bits (83), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 69/173 (39%), Gaps = 35/173 (20%)
Query: 646 NPDEMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHP 705
NP E D+ K ++++ + S+ + + + +AG+ETT S+ G + +P
Sbjct: 217 NPTE-----DIVTKLIEADIDGEKLSDDEFGFFVVMLAVAGNETTRNSITHGMIAFAQNP 271
Query: 706 DVQKKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQ 765
D Q E+ + +RP E + + + RT AL D L
Sbjct: 272 D-----QWELYK----------KERPETAADEIVRWATPVSAFQRT------ALEDVELG 310
Query: 766 GYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGA 818
G I K ++ ++ D+E + DP F ++ P+ ++ FG
Sbjct: 311 GVQIKKGQRVVMSYRSANFDEEVFEDPHTF---------NILRSPNPHVGFGG 354
Score = 29.3 bits (64), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 66/169 (39%), Gaps = 31/169 (18%)
Query: 325 NPDEMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIV 384
NP E D+ K ++++ + S+ + + + +AG+ETT R+ +H MI
Sbjct: 217 NPTE-----DIVTKLIEADIDGEKLSDDEFGFFVVMLAVAGNETT-----RNSITHGMIA 266
Query: 385 CFYLNRYLTSSMYTRSRRSLVQTLPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFI 444
+ +Y + R E E VR + + AL D L G I
Sbjct: 267 --FAQNPDQWELYKKERP---------ETAADEIVR-WATPVSAFQRTALEDVELGGVQI 314
Query: 445 PKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGA 493
K ++ ++ D+E + DP F ++ P+ ++ FG
Sbjct: 315 KKGQRVVMSYRSANFDEEVFEDPHTF---------NILRSPNPHVGFGG 354
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 36.6 bits (83), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 58/131 (44%), Gaps = 1/131 (0%)
Query: 677 AICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDRLPSLNDRPHMPYL 736
A +M G +TTS +L + + + VQ +AE+ + + +P L
Sbjct: 278 ANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDMATMLQLVPLL 337
Query: 737 EAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFR 796
+A E++R+ + ++ + D L+ Y IP T++ + + F+ DPE F
Sbjct: 338 KASIKETLRLH-PISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFD 396
Query: 797 PERFLNDKGAI 807
P R+L+ I
Sbjct: 397 PTRWLSKDKNI 407
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 403 SLVQTLPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKE 462
+++Q +P L+A E++R+ + ++ + D L+ Y IP T++ + +
Sbjct: 329 TMLQLVPLLKASIKETLRLH-PISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPT 387
Query: 463 FWHDPEVFRPERFLNDKGAI 482
F+ DPE F P R+L+ I
Sbjct: 388 FFFDPENFDPTRWLSKDKNI 407
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 58/131 (44%), Gaps = 1/131 (0%)
Query: 677 AICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDRLPSLNDRPHMPYL 736
A +M G +TTS +L + + + VQ +AE+ + + +P L
Sbjct: 275 ANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDMATMLQLVPLL 334
Query: 737 EAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFR 796
+A E++R+ + ++ + D L+ Y IP T++ + + F+ DPE F
Sbjct: 335 KASIKETLRLH-PISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFD 393
Query: 797 PERFLNDKGAI 807
P R+L+ I
Sbjct: 394 PTRWLSKDKNI 404
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 403 SLVQTLPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKE 462
+++Q +P L+A E++R+ + ++ + D L+ Y IP T++ + +
Sbjct: 326 TMLQLVPLLKASIKETLRLH-PISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPT 384
Query: 463 FWHDPEVFRPERFLNDKGAI 482
F+ DPE F P R+L+ I
Sbjct: 385 FFFDPENFDPTRWLSKDKNI 404
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 75/189 (39%), Gaps = 39/189 (20%)
Query: 633 FLRNELDNHKETFNPDEMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSK 692
+LR +D + T D M ++ V E+ D +E +++A C + +AG ETT
Sbjct: 211 YLRALIDERRRTPGEDLMSGLVAV-------EESGDQLTEDEIIATCNLLLIAGHETTVN 263
Query: 693 SLGFGFLYLLLHPDVQKKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYESVRVFMGRTF 752
+ L +L P A+ R A+ E++R +
Sbjct: 264 LIANAALAMLRTPGQWAALAADGSRA------------------SAVIEETMR-YDPPVQ 304
Query: 753 SIPHRALRDTTLQGYFIPK-DTMIIANFNGVLMDKEFWHDPEVF-RPERFLNDKGAIQVP 810
+ A D T+ + +PK DTM+ L+ DP + P+RF D+ I
Sbjct: 305 LVSRYAGDDLTIGTHTVPKGDTML-------LLLAAAHRDPTIVGAPDRFDPDRAQI--- 354
Query: 811 DQYLPFGAG 819
++L FG G
Sbjct: 355 -RHLGFGKG 362
Score = 33.1 bits (74), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 74/185 (40%), Gaps = 35/185 (18%)
Query: 312 FLRNELDNHKETFNPDEMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTTT 371
+LR +D + T D M ++ V E+ D +E +++A C + +AG ETT
Sbjct: 211 YLRALIDERRRTPGEDLMSGLVAV-------EESGDQLTEDEIIATCNLLLIAGHETTVN 263
Query: 372 LPSRHVNSHDMIVCFYLNRYLTSSMYTRSRRSLVQTLPYLEAITYESVRVFMGRTFSIPH 431
L I L T + +L A+ E++R + +
Sbjct: 264 L----------IANAALAMLRTPGQWA----ALAADGSRASAVIEETMR-YDPPVQLVSR 308
Query: 432 RALRDTTLQGYFIPK-DTMIIANFNGVLMDKEFWHDPEVF-RPERFLNDKGAIQVPDQYL 489
A D T+ + +PK DTM+ L+ DP + P+RF D+ I ++L
Sbjct: 309 YAGDDLTIGTHTVPKGDTML-------LLLAAAHRDPTIVGAPDRFDPDRAQI----RHL 357
Query: 490 PFGAG 494
FG G
Sbjct: 358 GFGKG 362
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 69/156 (44%), Gaps = 21/156 (13%)
Query: 671 SESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQA---EIDRVVGRDRLPSL 727
S ++ + + AG T+S + + L+L+ HP K +A EI+ + ++
Sbjct: 250 SLHEVCGMIVAAMFAGQHTSSITTTWSMLHLM-HPANVKHLEALRKEIEEFPAQLNYNNV 308
Query: 728 NDRPHMPYLEAITYESVR----VFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVL 783
D MP+ E ES+R + M + + + D + Y +PK +I +
Sbjct: 309 MDE--MPFAERCARESIRRDPPLLM-----LMRKVMADVKVGSYVVPKGDIIACSPLLSH 361
Query: 784 MDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAG 819
D+E + +P + PER +GA ++ FGAG
Sbjct: 362 HDEEAFPEPRRWDPERDEKVEGA------FIGFGAG 391
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 69/156 (44%), Gaps = 21/156 (13%)
Query: 671 SESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQA---EIDRVVGRDRLPSL 727
S ++ + + AG T+S + + L+L+ HP K +A EI+ + ++
Sbjct: 251 SLHEVCGMIVAAMFAGQHTSSITTTWSMLHLM-HPANVKHLEALRKEIEEFPAQLNYNNV 309
Query: 728 NDRPHMPYLEAITYESVR----VFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVL 783
D MP+ E ES+R + M + + + D + Y +PK +I +
Sbjct: 310 MDE--MPFAERCARESIRRDPPLLM-----LMRKVMADVKVGSYVVPKGDIIACSPLLSH 362
Query: 784 MDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAG 819
D+E + +P + PER +GA ++ FGAG
Sbjct: 363 HDEEAFPEPRRWDPERDEKVEGA------FIGFGAG 392
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 69/156 (44%), Gaps = 21/156 (13%)
Query: 671 SESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQA---EIDRVVGRDRLPSL 727
S ++ + + AG T+S + + L+L+ HP K +A EI+ + ++
Sbjct: 263 SLHEVCGMIVAAMFAGQHTSSITTTWSMLHLM-HPANVKHLEALRKEIEEFPAQLNYNNV 321
Query: 728 NDRPHMPYLEAITYESVR----VFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVL 783
D MP+ E ES+R + M + + + D + Y +PK +I +
Sbjct: 322 MDE--MPFAERCARESIRRDPPLLM-----LMRKVMADVKVGSYVVPKGDIIACSPLLSH 374
Query: 784 MDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAG 819
D+E + +P + PER +GA ++ FGAG
Sbjct: 375 HDEEAFPEPRRWDPERDEKVEGA------FIGFGAG 404
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 69/156 (44%), Gaps = 21/156 (13%)
Query: 671 SESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQA---EIDRVVGRDRLPSL 727
S ++ + + AG T+S + + L+L+ HP K +A EI+ + ++
Sbjct: 250 SLHEVCGMIVAAMFAGQHTSSITTTWSMLHLM-HPANVKHLEALRKEIEEFPAQLNYNNV 308
Query: 728 NDRPHMPYLEAITYESVR----VFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVL 783
D MP+ E ES+R + M + + + D + Y +PK +I +
Sbjct: 309 MDE--MPFAERCARESIRRDPPLLM-----LMRKVMADVKVGSYVVPKGDIIACSPLLSH 361
Query: 784 MDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAG 819
D+E + +P + PER +GA ++ FGAG
Sbjct: 362 HDEEAFPEPRRWDPERDEKVEGA------FIGFGAG 391
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 69/156 (44%), Gaps = 21/156 (13%)
Query: 671 SESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQA---EIDRVVGRDRLPSL 727
S ++ + + AG T+S + + L+L+ HP K +A EI+ + ++
Sbjct: 249 SLHEVCGMIVAAMFAGQHTSSITTTWSMLHLM-HPANVKHLEALRKEIEEFPAQLNYNNV 307
Query: 728 NDRPHMPYLEAITYESVR----VFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVL 783
D MP+ E ES+R + M + + + D + Y +PK +I +
Sbjct: 308 MDE--MPFAERCARESIRRDPPLLM-----LMRKVMADVKVGSYVVPKGDIIACSPLLSH 360
Query: 784 MDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAG 819
D+E + +P + PER +GA ++ FGAG
Sbjct: 361 HDEEAFPEPRRWDPERDEKVEGA------FIGFGAG 390
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 69/156 (44%), Gaps = 21/156 (13%)
Query: 671 SESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQA---EIDRVVGRDRLPSL 727
S ++ + + AG T+S + + L+L+ HP K +A EI+ + ++
Sbjct: 263 SLHEVCGMIVAAMFAGQHTSSITTTWSMLHLM-HPANVKHLEALRKEIEEFPAQLNYNNV 321
Query: 728 NDRPHMPYLEAITYESVR----VFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVL 783
D MP+ E ES+R + M + + + D + Y +PK +I +
Sbjct: 322 MDE--MPFAERCARESIRRDPPLLM-----LMRKVMADVKVGSYVVPKGDIIACSPLLSH 374
Query: 784 MDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAG 819
D+E + +P + PER +GA ++ FGAG
Sbjct: 375 HDEEAFPEPRRWDPERDEKVEGA------FIGFGAG 404
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 68/153 (44%), Gaps = 15/153 (9%)
Query: 671 SESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQK---KAQAEIDRVVGRDRLPSL 727
S ++ + + AG T++ + + L+L+ HP +K K EID + ++
Sbjct: 263 SLHEVCGMIVAAMFAGQHTSTITTSWSMLHLM-HPKNKKWLDKLHKEIDEFPAQLNYDNV 321
Query: 728 NDRPHMPYLEAITYESVRVFMGRTFSIPHRALR-DTTLQGYFIPKDTMIIANFNGVLMDK 786
D MP+ E ES+R + R ++ + + Y +PK +I + D+
Sbjct: 322 MDE--MPFAERCVRESIR--RDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDE 377
Query: 787 EFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAG 819
E + +P ++ PER GA ++ FGAG
Sbjct: 378 EAFPNPRLWDPERDEKVDGA------FIGFGAG 404
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 68/153 (44%), Gaps = 15/153 (9%)
Query: 671 SESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQK---KAQAEIDRVVGRDRLPSL 727
S ++ + + AG T++ + + L+L+ HP +K K EID + ++
Sbjct: 248 SLHEVCGMIVAAMFAGQHTSTITTSWSMLHLM-HPKNKKWLDKLHKEIDEFPAQLNYDNV 306
Query: 728 NDRPHMPYLEAITYESVRVFMGRTFSIPHRALR-DTTLQGYFIPKDTMIIANFNGVLMDK 786
D MP+ E ES+R + R ++ + + Y +PK +I + D+
Sbjct: 307 MDE--MPFAERCVRESIR--RDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDE 362
Query: 787 EFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAG 819
E + +P ++ PER GA ++ FGAG
Sbjct: 363 EAFPNPRLWDPERDEKVDGA------FIGFGAG 389
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 68/154 (44%), Gaps = 15/154 (9%)
Query: 670 FSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQK---KAQAEIDRVVGRDRLPS 726
S ++ + + AG T++ + + L+L+ HP +K K EID + +
Sbjct: 253 MSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLM-HPKNKKWLDKLHKEIDEFPAQLNYDN 311
Query: 727 LNDRPHMPYLEAITYESVRVFMGRTFSIPHRALR-DTTLQGYFIPKDTMIIANFNGVLMD 785
+ D MP+ E ES+R + R ++ + + Y +PK +I + D
Sbjct: 312 VMDE--MPFAERCVRESIR--RDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHD 367
Query: 786 KEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAG 819
+E + +P ++ PER GA ++ FGAG
Sbjct: 368 EEAFPNPRLWDPERDEKVDGA------FIGFGAG 395
>pdb|3RWL|A Chain A, Structure Of P450pyr Hydroxylase
Length = 426
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 73/178 (41%), Gaps = 31/178 (17%)
Query: 642 KETFNPDEMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYL 701
E N D D++ + L T + + L + + + G++TT S+ G L L
Sbjct: 226 NERVNKDPGNDLISM----LAHSPATRNMTPEEYLGNVLLLIVGGNDTTRNSMTGGVLAL 281
Query: 702 LLHPDVQKKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRD 761
+PD K +A P+L + +P E I +++ M RT A+ D
Sbjct: 282 HKNPDQFAKLKAN----------PALVE-TMVP--EIIRWQTPLAHMRRT------AIAD 322
Query: 762 TTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAG 819
+ L G I K ++ + D E + RPE F+ D+ P Q+L FG G
Sbjct: 323 SELGGKTIRKGDKVVMWYYSGNRDDEV-----IDRPEEFIIDR---PRPRQHLSFGFG 372
>pdb|1LFK|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
pdb|1LG9|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
pdb|1LGF|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
Length = 398
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 30/59 (50%), Gaps = 7/59 (11%)
Query: 668 DTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDV-------QKKAQAEIDRVV 719
D ++ +L C+ + +AG + S +G G L +L HP+ ++ AQ +D ++
Sbjct: 219 DDATDEELRGFCVQVMLAGDDNISGMIGLGVLAMLRHPEQIDAFRGDEQSAQRAVDELI 277
>pdb|2YOO|A Chain A, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|B Chain B, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|C Chain C, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|D Chain D, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|3ZBY|A Chain A, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|B Chain B, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|C Chain C, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|D Chain D, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|E Chain E, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|F Chain F, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
Length = 407
Score = 33.9 bits (76), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 64/165 (38%), Gaps = 28/165 (16%)
Query: 655 DVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAE 714
D++ + SE + S+ +++ + + + G ETT +L G LL H D A+
Sbjct: 203 DLFSVLVNSEVEGQRMSDDEIVFETLLILIGGDETTRHTLSGGTEQLLRHRDQWDALVAD 262
Query: 715 IDRVVGRDRLPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTM 774
+D + G E + + S M RT + DT G +
Sbjct: 263 VDLLPG-------------AIEEMLRWTSPVKNMCRTLTA------DTVFHGTELRAGEK 303
Query: 775 IIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAG 819
I+ F D+ + DP+ FR +R P+ ++ FG G
Sbjct: 304 IMLMFESANFDESVFGDPDNFRIDRN---------PNSHVAFGFG 339
>pdb|3B6H|A Chain A, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
pdb|3B6H|B Chain B, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
Length = 498
Score = 33.9 bits (76), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 65/145 (44%), Gaps = 30/145 (20%)
Query: 395 SMYTRSRRSLVQTLPYLEAITYESVRV----FMGRT----FSIPHRALRDTTLQGYFIPK 446
S T + ++ + P L+++ ES+R+ F+ R ++P R+ L+
Sbjct: 315 SQTTTLPQKVLDSTPVLDSVLSESLRLTAAPFITREVVVDLAMPMADGREFNLRR----G 370
Query: 447 DTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGA---------IQVPDQYLPFGAGPDR 497
D +++ F D E + DPEVF+ RFLN G+ ++ + +P+GAG +
Sbjct: 371 DRLLLFPFLSPQRDPEIYTDPEVFKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGHNH 430
Query: 498 LLVTDEQLWVEQRRFVLRQLREFGF 522
L R + + +++F F
Sbjct: 431 CL---------GRSYAVNSIKQFVF 446
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 21/104 (20%)
Query: 734 PYLEAITYESVRV----FMGRT----FSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMD 785
P L+++ ES+R+ F+ R ++P R+ L+ D +++ F D
Sbjct: 329 PVLDSVLSESLRLTAAPFITREVVVDLAMPMADGREFNLRR----GDRLLLFPFLSPQRD 384
Query: 786 KEFWHDPEVFRPERFLNDKGA---------IQVPDQYLPFGAGR 820
E + DPEVF+ RFLN G+ ++ + +P+GAG
Sbjct: 385 PEIYTDPEVFKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGH 428
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 33.9 bits (76), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 59/160 (36%), Gaps = 29/160 (18%)
Query: 661 LKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVG 720
LK +K D +E + + C+ + +AG ETT + L LL HP+ K + D ++G
Sbjct: 211 LKGREK-DKLTEEEAASTCILLAIAGHETTVNLISNSVLCLLQHPEQLLKLRENPD-LIG 268
Query: 721 RDRLPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFN 780
E + YES R S D + G I + +
Sbjct: 269 ------------TAVEECLRYESPTQMTARVAS------EDIDICGVTIRQGEQVYLLLG 310
Query: 781 GVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAGR 820
D + +P+VF R P+ +L FG G
Sbjct: 311 AANRDPSIFTNPDVFDITR---------SPNPHLSFGHGH 341
Score = 30.0 bits (66), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 60/155 (38%), Gaps = 25/155 (16%)
Query: 340 LKSEDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFYLNRYLTSSMYTR 399
LK +K D +E + + C+ + +AG ETT L S + ++C L ++ + R
Sbjct: 211 LKGREK-DKLTEEEAASTCILLAIAGHETTVNLIS------NSVLC--LLQHPEQLLKLR 261
Query: 400 SRRSLVQTLPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLM 459
L+ T E + YES R S D + G I + +
Sbjct: 262 ENPDLIGT-AVEECLRYESPTQMTARVAS------EDIDICGVTIRQGEQVYLLLGAANR 314
Query: 460 DKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAG 494
D + +P+VF R P+ +L FG G
Sbjct: 315 DPSIFTNPDVFDITR---------SPNPHLSFGHG 340
>pdb|2IAG|A Chain A, Crystal Structure Of Human Prostacyclin Synthase
pdb|2IAG|B Chain B, Crystal Structure Of Human Prostacyclin Synthase
Length = 482
Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 63/138 (45%), Gaps = 30/138 (21%)
Query: 402 RSLVQTLPYLEAITYESVRV----FMGRT----FSIPHRALRDTTLQGYFIPKDTMIIAN 453
+ ++ + P L+++ ES+R+ F+ R ++P R+ L+ D +++
Sbjct: 310 QKVLDSTPVLDSVLSESLRLTAAPFITREVVVDLAMPMADGREFNLRR----GDRLLLFP 365
Query: 454 FNGVLMDKEFWHDPEVFRPERFLNDKGA---------IQVPDQYLPFGAGPDRLLVTDEQ 504
F D E + DPEVF+ RFLN G+ ++ + +P+GAG + L
Sbjct: 366 FLSPQRDPEIYTDPEVFKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCL----- 420
Query: 505 LWVEQRRFVLRQLREFGF 522
R + + +++F F
Sbjct: 421 ----GRSYAVNSIKQFVF 434
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 21/104 (20%)
Query: 734 PYLEAITYESVRV----FMGRT----FSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMD 785
P L+++ ES+R+ F+ R ++P R+ L+ D +++ F D
Sbjct: 317 PVLDSVLSESLRLTAAPFITREVVVDLAMPMADGREFNLRR----GDRLLLFPFLSPQRD 372
Query: 786 KEFWHDPEVFRPERFLNDKGA---------IQVPDQYLPFGAGR 820
E + DPEVF+ RFLN G+ ++ + +P+GAG
Sbjct: 373 PEIYTDPEVFKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGH 416
>pdb|1Z8Q|A Chain A, Ferrous Dioxygen Complex Of The A245t Cytochrome P450eryf
Length = 404
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 664 EDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPD 706
+D S +L +I + + +AG ET+ +G G LL HPD
Sbjct: 220 DDDDGRLSADELTSIALVLLLAGFETSVSLIGIGTYLLLTHPD 262
>pdb|2WHW|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WHW|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
Length = 436
Score = 32.7 bits (73), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 652 DIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKA 711
D++ ++T S++ + +LL + + +AG ETT + G LL HPD
Sbjct: 232 DLLSALVRT--SDEDGSRLTSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAAL 289
Query: 712 QAEI 715
+A++
Sbjct: 290 RADM 293
>pdb|2VZ7|A Chain A, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZ7|B Chain B, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZM|A Chain A, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
pdb|2VZM|B Chain B, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
Length = 436
Score = 32.7 bits (73), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 652 DIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKA 711
D++ ++T S++ + +LL + + +AG ETT + G LL HPD
Sbjct: 232 DLLSALVRT--SDEDGSRLTSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAAL 289
Query: 712 QAEI 715
+A++
Sbjct: 290 RADM 293
>pdb|2BVJ|A Chain A, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2BVJ|B Chain B, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2C6H|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C6H|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C7X|A Chain A, Crystal Structure Of Narbomycin-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
Length = 436
Score = 32.7 bits (73), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 652 DIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKA 711
D++ ++T S++ + +LL + + +AG ETT + G LL HPD
Sbjct: 232 DLLSALVRT--SDEDGSRLTSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAAL 289
Query: 712 QAEI 715
+A++
Sbjct: 290 RADM 293
>pdb|2Z36|A Chain A, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
pdb|2Z36|B Chain B, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
Length = 413
Score = 32.3 bits (72), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 13/52 (25%), Positives = 28/52 (53%)
Query: 655 DVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPD 706
D++ + + + + T + L+++ + AG ETT+ + G + LL HP+
Sbjct: 215 DLFSRQIARQRQEGTLDHAGLVSLAFLLLTAGHETTANMISLGVVGLLSHPE 266
>pdb|1PKF|A Chain A, Crystal Structure Of Epothilone D-Bound Cytochrome
P450epok
Length = 419
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Query: 621 KSFVSIHQKVWKFLRNELDNHKETFNPDEMRDIMDVYLKTLKSEDKTDTFSESQLLAICM 680
K+ V+ + L LD + NP E DV L++E S +L+A+
Sbjct: 196 KTLVASVTEGLALLHGVLDERRR--NPLEN----DVLTMLLQAEADGSRLSTKELVALVG 249
Query: 681 DMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAE 714
+ AG++TT + F L LL P+ + +AE
Sbjct: 250 AIIAAGTDTTIYLIAFAVLNLLRSPEALELVKAE 283
>pdb|1JIP|A Chain A, P450eryf(A245s)KETOCONAZOLE
Length = 403
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 664 EDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPD 706
+D S +L +I + + +AG E++ +G G LL HPD
Sbjct: 219 DDDDGRLSADELTSIALVLLLAGFESSVSLIGIGTYLLLTHPD 261
>pdb|1Q5D|A Chain A, Epothilone B-Bound Cytochrome P450epok
pdb|1Q5E|A Chain A, Substrate-Free Cytochrome P450epok
Length = 419
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Query: 621 KSFVSIHQKVWKFLRNELDNHKETFNPDEMRDIMDVYLKTLKSEDKTDTFSESQLLAICM 680
K+ V+ + L LD + NP E DV L++E S +L+A+
Sbjct: 196 KTLVASVTEGLALLHGVLDERRR--NPLEN----DVLTMLLQAEADGSRLSTKELVALVG 249
Query: 681 DMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAE 714
+ AG++TT + F L LL P+ + +AE
Sbjct: 250 AIIAAGTDTTIYLIAFAVLNLLRSPEALELVKAE 283
>pdb|3E5L|A Chain A, Crystal Structure Of Cyp105p1 H72a Mutant
Length = 403
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 60/168 (35%), Gaps = 33/168 (19%)
Query: 655 DVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAE 714
D+ + +ED + L+ + +A +TT+ +G G LL PD
Sbjct: 207 DLISALITTEDPDGVVDDMFLMNAAGTLLIAAHDTTACMIGLGTALLLDSPD-------- 258
Query: 715 IDRVVGRDRLPSLNDRPHM---PYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPK 771
+L L + P + E + Y ++ F G A RD L G I K
Sbjct: 259 --------QLALLREDPSLVGNAVEELLRYLTIGQFGGERV-----ATRDVELGGVRIAK 305
Query: 772 DTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAG 819
++A+ D F +PE F R P +L FG G
Sbjct: 306 GEQVVAHVLAADFDPAFVEEPERFDITRR---------PAPHLAFGFG 344
>pdb|1Z8P|A Chain A, Ferrous Dioxygen Complex Of The A245s Cytochrome P450eryf
Length = 404
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 664 EDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPD 706
+D S +L +I + + +AG E++ +G G LL HPD
Sbjct: 220 DDDDGRLSADELTSIALVLLLAGFESSVSLIGIGTYLLLTHPD 262
>pdb|3E5J|A Chain A, Crystal Structure Of Cyp105p1 Wild-type Ligand-free Form
pdb|3E5K|A Chain A, Crystal Structure Of Cyp105p1 Wild-Type 4-Phenylimidazole
Complex
Length = 403
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 60/168 (35%), Gaps = 33/168 (19%)
Query: 655 DVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAE 714
D+ + +ED + L+ + +A +TT+ +G G LL PD
Sbjct: 207 DLISALITTEDPDGVVDDMFLMNAAGTLLIAAHDTTACMIGLGTALLLDSPD-------- 258
Query: 715 IDRVVGRDRLPSLNDRPHM---PYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPK 771
+L L + P + E + Y ++ F G A RD L G I K
Sbjct: 259 --------QLALLREDPSLVGNAVEELLRYLTIGQFGGERV-----ATRDVELGGVRIAK 305
Query: 772 DTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAG 819
++A+ D F +PE F R P +L FG G
Sbjct: 306 GEQVVAHVLAADFDPAFVEEPERFDITRR---------PAPHLAFGFG 344
>pdb|3ABA|A Chain A, Crystal Structure Of Cyp105p1 In Complex With Filipin I
Length = 403
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 60/168 (35%), Gaps = 33/168 (19%)
Query: 655 DVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAE 714
D+ + +ED + L+ + +A +TT+ +G G LL PD
Sbjct: 207 DLISALITTEDPDGVVDDMFLMNAAGTLLIAAHDTTACMIGLGTALLLDSPD-------- 258
Query: 715 IDRVVGRDRLPSLNDRPHM---PYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPK 771
+L L + P + E + Y ++ F G A RD L G I K
Sbjct: 259 --------QLALLREDPSLVGNAVEELLRYLTIGQFGGERV-----ATRDVELGGVRIAK 305
Query: 772 DTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAG 819
++A+ D F +PE F R P +L FG G
Sbjct: 306 GEQVVAHVLAADFDPAFVEEPERFDITRR---------PAPHLAFGFG 344
>pdb|3B98|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B98|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B99|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
pdb|3B99|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
Length = 475
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 81/183 (44%), Gaps = 18/183 (9%)
Query: 625 SIHQKVWKFLRNELDNHKETFNPDEMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFM 684
+ +K+WK+L + K P E + + Y+K L+ E +E Q A+ + +++
Sbjct: 213 AAREKLWKWLTPSGLDRK----PRE-QSWLGSYVKQLQDEG---IDAEMQRRAMLLQLWV 264
Query: 685 AGSETTSKSLGFGFL-YLLLHPDVQKKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYES 743
++ + F + YLL HP+ + + EI G L + + P +++ +E+
Sbjct: 265 --TQGNAGPAAFWVMGYLLTHPEALRAVREEIQ---GGKHLRLEERQKNTPVFDSVLWET 319
Query: 744 VRV----FMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPER 799
+R+ + R + + + + D + + F MD + PE+F+ +R
Sbjct: 320 LRLTAAALITRDVTQDKKICLSNGQEYHLRRGDRLCVFPFISPQMDPQIHQQPEMFQFDR 379
Query: 800 FLN 802
FLN
Sbjct: 380 FLN 382
>pdb|1Z8O|A Chain A, Ferrous Dioxygen Complex Of The Wild-Type Cytochrome
P450eryf
Length = 404
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 664 EDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPD 706
+D S +L +I + + +AG E + +G G LL HPD
Sbjct: 220 DDDDGRLSADELTSIALVLLLAGFEASVSLIGIGTYLLLTHPD 262
>pdb|1JIO|A Chain A, P450eryf/6deb
Length = 403
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 664 EDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPD 706
+D S +L +I + + +AG E + +G G LL HPD
Sbjct: 219 DDDDGRLSADELTSIALVLLLAGFEASVSLIGIGTYLLLTHPD 261
>pdb|1IO8|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO8|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 65/149 (43%), Gaps = 30/149 (20%)
Query: 348 TFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFYLNRYLTSSMYTRS-RRSLVQ 406
S+ + L + + +AG+ETTT L S V D R ++Y ++ +L
Sbjct: 193 NLSDIEKLGYIILLLIAGNETTTNLISNSV--IDFTRFNLWQRIREENLYLKAIEEALRY 250
Query: 407 TLPYLEAITYESVRVFMGRTFSIPHRALRDTTL-QGYFIPKDTMIIANFNGVLMDKEFWH 465
+ P + + RV +G D T+ +G ++ + IA+ N D+E +H
Sbjct: 251 SPPVMRTVRKTKERVKLG-----------DQTIEEGEYV---RVWIASAN---RDEEVFH 293
Query: 466 DPEVFRPERFLNDKGAIQVPDQYLPFGAG 494
D E F P+R P+ +L FG+G
Sbjct: 294 DGEKFIPDRN---------PNPHLSFGSG 313
>pdb|1F4T|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4T|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4U|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1F4U|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1IO9|A Chain A, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO9|B Chain B, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 65/149 (43%), Gaps = 30/149 (20%)
Query: 348 TFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFYLNRYLTSSMYTRS-RRSLVQ 406
S+ + L + + +AG+ETTT L S V D R ++Y ++ +L
Sbjct: 193 NLSDIEKLGYIILLLIAGNETTTNLISNSV--IDFTRFNLWQRIREENLYLKAIEEALRY 250
Query: 407 TLPYLEAITYESVRVFMGRTFSIPHRALRDTTL-QGYFIPKDTMIIANFNGVLMDKEFWH 465
+ P + + RV +G D T+ +G ++ + IA+ N D+E +H
Sbjct: 251 SPPVMRTVRKTKERVKLG-----------DQTIEEGEYV---RVWIASAN---RDEEVFH 293
Query: 466 DPEVFRPERFLNDKGAIQVPDQYLPFGAG 494
D E F P+R P+ +L FG+G
Sbjct: 294 DGEKFIPDR---------NPNPHLSFGSG 313
>pdb|1EGY|A Chain A, Cytochrome P450eryf With 9-Aminophenanthrene Bound
pdb|1EUP|A Chain A, X-Ray Crystal Structure Of Cytochrome P450eryf With
Androstendione Bound
pdb|1JIN|A Chain A, P450eryfKETOCONAZOLE
pdb|1OXA|A Chain A, Cytochrome P450 (Donor:o2 Oxidoreductase)
Length = 403
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 664 EDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPD 706
+D S +L +I + + +AG E + +G G LL HPD
Sbjct: 219 DDDDGRLSADELTSIALVLLLAGFEASVSLIGIGTYLLLTHPD 261
>pdb|1XQD|A Chain A, Crystal Structure Of P450nor Complexed With 3-
Pyridinealdehyde Adenine Dinucleotide
Length = 403
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 53/145 (36%), Gaps = 18/145 (12%)
Query: 655 DVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAE 714
D+ K + K +S + I + +AG+ T + G L HPD + +A
Sbjct: 209 DIISKLCTEQVKPGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKAN 268
Query: 715 IDRVVGRDRLPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTM 774
PSL + ++E E R +I A D + + +
Sbjct: 269 ----------PSLAPQ----FVE----ELCRYHTASALAIKRTAKEDVMIGDKLVRANEG 310
Query: 775 IIANFNGVLMDKEFWHDPEVFRPER 799
IIA+ D+E + +P+ F R
Sbjct: 311 IIASNQSANRDEEVFENPDEFNMNR 335
>pdb|1ULW|A Chain A, Crystal Structure Of P450nor Ser73gly/ser75gly Mutant
Length = 402
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 53/145 (36%), Gaps = 18/145 (12%)
Query: 655 DVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAE 714
D+ K + K +S + I + +AG+ T + G L HPD + +A
Sbjct: 208 DIISKLCTEQVKPGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKAN 267
Query: 715 IDRVVGRDRLPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTM 774
PSL + ++E E R +I A D + + +
Sbjct: 268 ----------PSLAPQ----FVE----ELCRYHTASALAIKRTAKEDVMIGDKLVRANEG 309
Query: 775 IIANFNGVLMDKEFWHDPEVFRPER 799
IIA+ D+E + +P+ F R
Sbjct: 310 IIASNQSANRDEEVFENPDEFNMNR 334
>pdb|2Z3T|A Chain A, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|B Chain B, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|C Chain C, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|D Chain D, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3U|A Chain A, Crystal Structure Of Chromopyrrolic Acid Bound Cytochrome
P450 Stap (Cyp245a1)
pdb|3A1L|A Chain A, Crystal Structure Of 11,11'-Dichlorochromopyrrolic Acid
Bound Cytochrome P450 Stap (Cyp245a1)
Length = 425
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/145 (20%), Positives = 54/145 (37%), Gaps = 39/145 (26%)
Query: 661 LKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDV-------QKKAQA 713
+++ D S ++ C+ + AG ETT+ L L L H DV + A
Sbjct: 230 VRARDTGSPLSVDGIVGTCVHLLTAGHETTTNFLAKAVLTLRAHRDVLDELRTTPESTPA 289
Query: 714 EIDRVVGRDRLPSLNDRPHMPYLEAIT---YESVRVFMGRTFSIPHRALRDTTLQGYFIP 770
++ ++ D P ++A+T YE +R L + IP
Sbjct: 290 AVEELMRYD-----------PPVQAVTRWAYEDIR------------------LGDHDIP 320
Query: 771 KDTMIIANFNGVLMDKEFWHDPEVF 795
+ + ++A D + DP+V
Sbjct: 321 RGSRVVALLGSANRDPARFPDPDVL 345
>pdb|1EHE|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
pdb|1GEI|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1GED|A Chain A, A Positive Charge Route For The Access Of Nadh To Heme
Formed In The Distal Heme Pocket Of Cytochrome P450nor
pdb|1GEJ|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum
pdb|2ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum Complex With Carbon Monoxide
Length = 403
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 53/145 (36%), Gaps = 18/145 (12%)
Query: 655 DVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAE 714
D+ K + K +S + I + +AG+ T + G L HPD + +A
Sbjct: 209 DIISKLCTEQVKPGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKAN 268
Query: 715 IDRVVGRDRLPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTM 774
PSL + ++E E R +I A D + + +
Sbjct: 269 ----------PSLAPQ----FVE----ELCRYHTASALAIKRTAKEDVMIGDKLVRANEG 310
Query: 775 IIANFNGVLMDKEFWHDPEVFRPER 799
IIA+ D+E + +P+ F R
Sbjct: 311 IIASNQSANRDEEVFENPDEFNMNR 335
>pdb|1CL6|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Its Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 53/145 (36%), Gaps = 18/145 (12%)
Query: 655 DVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAE 714
D+ K + K +S + I + +AG+ T + G L HPD + +A
Sbjct: 208 DIISKLCTEQVKPGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKAN 267
Query: 715 IDRVVGRDRLPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTM 774
PSL + ++E E R +I A D + + +
Sbjct: 268 ----------PSLAPQ----FVE----ELCRYHTASALAIKRTAKEDVMIGDKLVRANEG 309
Query: 775 IIANFNGVLMDKEFWHDPEVFRPER 799
IIA+ D+E + +P+ F R
Sbjct: 310 IIASNQSANRDEEVFENPDEFNMNR 334
>pdb|1JFB|A Chain A, X-Ray Structure Of Nitric Oxide Reductase (Cytochrome
P450nor) In The Ferric Resting State At Atomic
Resolution
pdb|1JFC|A Chain A, X-ray Structure Of Nitric Oxide Reductase (cytochrome
P450nor) In The Ferrous Co State At Atomic Resolution
Length = 404
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 53/145 (36%), Gaps = 18/145 (12%)
Query: 655 DVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAE 714
D+ K + K +S + I + +AG+ T + G L HPD + +A
Sbjct: 210 DIISKLCTEQVKPGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKAN 269
Query: 715 IDRVVGRDRLPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTM 774
PSL + ++E E R +I A D + + +
Sbjct: 270 ----------PSLAPQ----FVE----ELCRYHTASALAIKRTAKEDVMIGDKLVRANEG 311
Query: 775 IIANFNGVLMDKEFWHDPEVFRPER 799
IIA+ D+E + +P+ F R
Sbjct: 312 IIASNQSANRDEEVFENPDEFNMNR 336
>pdb|1EHF|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 53/145 (36%), Gaps = 18/145 (12%)
Query: 655 DVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAE 714
D+ K + K +S + I + +AG+ T + G L HPD + +A
Sbjct: 209 DIISKLCTEQVKPGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKAN 268
Query: 715 IDRVVGRDRLPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTM 774
PSL + ++E E R +I A D + + +
Sbjct: 269 ----------PSLAPQ----FVE----ELCRYHTATALAIKRTAKEDVMIGDKLVRANEG 310
Query: 775 IIANFNGVLMDKEFWHDPEVFRPER 799
IIA+ D+E + +P+ F R
Sbjct: 311 IIASNQSANRDEEVFENPDEFNMNR 335
>pdb|1CMJ|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 53/145 (36%), Gaps = 18/145 (12%)
Query: 655 DVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAE 714
D+ K + K +S + I + +AG+ T + G L HPD + +A
Sbjct: 208 DIISKLCTEQVKPGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKAN 267
Query: 715 IDRVVGRDRLPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTM 774
PSL + ++E E R +I A D + + +
Sbjct: 268 ----------PSLAPQ----FVE----ELCRYHTATALAIKRTAKEDVMIGDKLVRANEG 309
Query: 775 IIANFNGVLMDKEFWHDPEVFRPER 799
IIA+ D+E + +P+ F R
Sbjct: 310 IIASNQSANRDEEVFENPDEFNMNR 334
>pdb|1EHG|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 30.8 bits (68), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 53/145 (36%), Gaps = 18/145 (12%)
Query: 655 DVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAE 714
D+ K + K +S + I + +AG+ T + G L HPD + +A
Sbjct: 209 DIISKLCTEQVKPGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKAN 268
Query: 715 IDRVVGRDRLPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTM 774
PSL + ++E E R +I A D + + +
Sbjct: 269 ----------PSLAPQ----FVE----ELCRYHTAVALAIKRTAKEDVMIGDKLVRANEG 310
Query: 775 IIANFNGVLMDKEFWHDPEVFRPER 799
IIA+ D+E + +P+ F R
Sbjct: 311 IIASNQSANRDEEVFENPDEFNMNR 335
>pdb|1CMN|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 30.8 bits (68), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 53/145 (36%), Gaps = 18/145 (12%)
Query: 655 DVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAE 714
D+ K + K +S + I + +AG+ T + G L HPD + +A
Sbjct: 208 DIISKLCTEQVKPGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKAN 267
Query: 715 IDRVVGRDRLPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTM 774
PSL + ++E E R +I A D + + +
Sbjct: 268 ----------PSLAPQ----FVE----ELCRYHTAVALAIKRTAKEDVMIGDKLVRANEG 309
Query: 775 IIANFNGVLMDKEFWHDPEVFRPER 799
IIA+ D+E + +P+ F R
Sbjct: 310 IIASNQSANRDEEVFENPDEFNMNR 334
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|B Chain B, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|C Chain C, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|2ZQX|A Chain A, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|B Chain B, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|C Chain C, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQJ|A Chain A, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|B Chain B, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|C Chain C, Substrate-Free Form Of Cytochrome P450bsbeta
Length = 417
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 16/30 (53%)
Query: 446 KDTMIIANFNGVLMDKEFWHDPEVFRPERF 475
K T ++ + G D W P+ FRPERF
Sbjct: 310 KGTSVLLDLYGTNHDPRLWDHPDEFRPERF 339
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 16/30 (53%)
Query: 771 KDTMIIANFNGVLMDKEFWHDPEVFRPERF 800
K T ++ + G D W P+ FRPERF
Sbjct: 310 KGTSVLLDLYGTNHDPRLWDHPDEFRPERF 339
>pdb|2BSZ|A Chain A, Structure Of Mesorhizobium Loti Arylamine N-
Acetyltransferase 1
pdb|2BSZ|B Chain B, Structure Of Mesorhizobium Loti Arylamine N-
Acetyltransferase 1
Length = 278
Score = 30.0 bits (66), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
Query: 386 FYLNRYLTSSMYTRSRRSLVQTLPYL-----EAITYESVRVFMGRTFSIPHRALRDTTLQ 440
F L+ YL YT R + + TL L +AI +E++ F+GR + AL+D +
Sbjct: 7 FDLDAYLARIGYTGPRNASLDTLKALHFAHPQAIPFENIDPFLGRPVRLDLAALQDKIVL 66
Query: 441 G 441
G
Sbjct: 67 G 67
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.139 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,988,901
Number of Sequences: 62578
Number of extensions: 1011410
Number of successful extensions: 2761
Number of sequences better than 100.0: 156
Number of HSP's better than 100.0 without gapping: 100
Number of HSP's successfully gapped in prelim test: 56
Number of HSP's that attempted gapping in prelim test: 2301
Number of HSP's gapped (non-prelim): 350
length of query: 820
length of database: 14,973,337
effective HSP length: 107
effective length of query: 713
effective length of database: 8,277,491
effective search space: 5901851083
effective search space used: 5901851083
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 56 (26.2 bits)