RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy13734
(820 letters)
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug
metabolism, structural genomics, structural genomics
consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens}
SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Length = 481
Score = 347 bits (892), Expect = e-111
Identities = 88/323 (27%), Positives = 151/323 (46%), Gaps = 14/323 (4%)
Query: 504 QLWVEQRRFVLRQLREFGFGKRTMAQLVEEEAYQLVQLFKQEVQDGGAIIPMRDAFSVPV 563
+ WV+ RR + R FG+G+++ + EE + G + + V
Sbjct: 105 RGWVDHRRLAVNSFRYFGYGQKSFESKILEETKFFNDAIETY---KGRPFDFKQLITNAV 161
Query: 564 LNTLWSMLAGIRYSPEDKELKKIQSLLTELFANID-MVGALFSQFPILRYVAPEMSGYKS 622
N ++ G R++ ED + + + L +E L++ FP + + ++
Sbjct: 162 SNITNLIIFGERFTYEDTDFQHMIELFSENVELAASASVFLYNAFPWIGILPF--GKHQQ 219
Query: 623 FVSIHQKVWKFLRNELDNHKETFNPDEMRDIMDVYLKTLKSE--DKTDTFSESQLLAICM 680
V+ FL ++ P + +D YL + D + TFS+ L+
Sbjct: 220 LFRNAAVVYDFLSRLIEKASVNRKPQLPQHFVDAYLDEMDQGKNDPSSTFSKENLIFSVG 279
Query: 681 DMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDRLPSLNDRPHMPYLEAIT 740
++ +AG+ETT+ L + L++ L+P++Q + Q EID ++G + PS +D+ MPY EA+
Sbjct: 280 ELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSWDDKCKMPYTEAVL 339
Query: 741 YESVRVFMGRT---FSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRP 797
+E +R I H D ++GY IPK T +I N V D+++W DPEVF P
Sbjct: 340 HEVLRF---CNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHP 396
Query: 798 ERFLNDKGAIQVPDQYLPFGAGR 820
ERFL+ G + +PF GR
Sbjct: 397 ERFLDSSGYFAKKEALVPFSLGR 419
Score = 306 bits (787), Expect = 9e-96
Identities = 106/510 (20%), Positives = 178/510 (34%), Gaps = 126/510 (24%)
Query: 21 ILAYLDTKKPRNFPPGPDWIPILGSALAIQKLRNQTGYLYQACAELSKQYGPVVGLRVGK 80
+ ++P FPPGP +P +G+ + L + + + S+ YG + L +G
Sbjct: 1 MAKKTKQRRPMGFPPGPPGLPFIGNIYS---LAASSELPHVYMRKQSQVYGEIFSLDLGG 57
Query: 81 DRQVVCFGYPAIKEMLSK--EEFDGRPRGPFYETRTWGKRQGLMEGTVTAKVLSSLKRRE 138
VV GY +KE L E F RP P + T
Sbjct: 58 ISTVVLNGYDVVKECLVHQSEIFADRPCLPLFMKMTKMG--------------------- 96
Query: 139 KEDRIGESQPFRERAGIKPVTALGYKVDVLLSKAGLLVTDEQLWVEQRRFVLRQLREFGF 198
+L S+ G + WV+ RR + R FG+
Sbjct: 97 ---------------------------GLLNSRYG------RGWVDHRRLAVNSFRYFGY 123
Query: 199 GKRTMAQLVEEEAYQLVQLFKQEVQHLSLPGAIIPMRDAFSVPVLNTLWSMLAGIRYSPE 258
G+++ + EE + G + + V N ++ G R++ E
Sbjct: 124 GQKSFESKILEETKFFNDAIETYK------GRPFDFKQLITNAVSNITNLIIFGERFTYE 177
Query: 259 DKELKKIQSLLTELFANID-MVGALFSQFPILRYVAPEMSGYKSFVSIHQKVWKFLRNEL 317
D + + + L +E L++ FP + + ++ V+ FL +
Sbjct: 178 DTDFQHMIELFSENVELAASASVFLYNAFPWIGILPF--GKHQQLFRNAAVVYDFLSRLI 235
Query: 318 DNHKETFNPDEMRDIMDVYLKTLKSE--DKTDTFSESQLLAICMDMFMAGSETT-TTL-- 372
+ P + +D YL + D + TFS+ L+ ++ +AG+ETT L
Sbjct: 236 EKASVNRKPQLPQHFVDAYLDEMDQGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRW 295
Query: 373 ------------------------PSRHVNSHDMIVCFYLNRYLTSSMYTRSRRSLVQTL 408
P+ + D + + +
Sbjct: 296 AILFMALYPNIQGQVQKEIDLIMGPNGKPSWDD-----------------KCK------M 332
Query: 409 PYLEAITYESVRVFMGRT---FSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWH 465
PY EA+ +E +R I H D ++GY IPK T +I N V D+++W
Sbjct: 333 PYTEAVLHEVLRF---CNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWR 389
Query: 466 DPEVFRPERFLNDKGAIQVPDQYLPFGAGP 495
DPEVF PERFL+ G + +PF G
Sbjct: 390 DPEVFHPERFLDSSGYFAKKEALVPFSLGR 419
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1,
P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme
protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Length = 494
Score = 344 bits (886), Expect = e-110
Identities = 89/330 (26%), Positives = 148/330 (44%), Gaps = 22/330 (6%)
Query: 504 QLWVEQRRFVLRQLREFGFGKRTMAQLVEEEAYQLVQLFKQEVQDGGAIIPMRDAFSVPV 563
W RR + F G + + +++ +E L + +G +I V V
Sbjct: 101 AHWQLHRRLAMATFALFKDGDQKLEKIICQEISTLCDMLAT--HNGQSIDISFP-VFVAV 157
Query: 564 LNTLWSMLAGIRYSPEDKELKKIQSLLTELFANIDMVGALFSQFPILRYVAPEMSGYKSF 623
N + + Y D EL IQ+ + N+ +L P L+ +
Sbjct: 158 TNVISLICFNTSYKNGDPELNVIQNYNEGIIDNL-SKDSLVDLVPWLKIFPN--KTLEKL 214
Query: 624 VSIHQKVWKFLRNELDNHKETFNPDEMRDIMDVYLKTLKSEDKTD--------TFSESQL 675
S + L L+N+KE F D + +++D ++ + D + S++ +
Sbjct: 215 KSHVKIRNDLLNKILENYKEKFRSDSITNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHI 274
Query: 676 LAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDRLPSLNDRPHMPY 735
L D+F AG ETT+ + + +LL +P V+KK EID+ VG R P+++DR +
Sbjct: 275 LTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLL 334
Query: 736 LEAITYESVRVFMGRT---FSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDP 792
LEA E +R+ R IPH+A D+++ + + K T +I N + +++ WH P
Sbjct: 335 LEATIREVLRL---RPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQP 391
Query: 793 EVFRPERFLNDKGAIQV--PDQYLPFGAGR 820
+ F PERFLN G + YLPFGAG
Sbjct: 392 DQFMPERFLNPAGTQLISPSVSYLPFGAGP 421
Score = 308 bits (792), Expect = 2e-96
Identities = 104/510 (20%), Positives = 181/510 (35%), Gaps = 134/510 (26%)
Query: 28 KKPRNFPPGPDWIPILGSALAIQKLRNQTGYLYQACAELSKQYGPVVGLRVGKDRQVVCF 87
K +P +P++GS + + G+++ +L K+YGP+ +R+G V+
Sbjct: 4 KTGAKYPKSLLSLPLVGSLPFL----PRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVG 59
Query: 88 GYPAIKEMLSK--EEFDGRPRGPFYETRTWGKRQGLMEGTVTAKVLSSLKRREKEDRIGE 145
+ KE+L K ++F GRP+ + + ++
Sbjct: 60 HHQLAKEVLIKKGKDFSGRPQMATLDIASNNRK--------------------------- 92
Query: 146 SQPFRERAGIKPVTALGYKVDVLLSKAGLLVTDEQLWVEQRRFVLRQLREFGFGKRTMAQ 205
+ + +G W RR + F G + + +
Sbjct: 93 --------------------GIAFADSG------AHWQLHRRLAMATFALFKDGDQKLEK 126
Query: 206 LVEEEAYQLVQLFKQEVQHLSLPGAIIPMRDAFSVPVLNTLWSMLAGIRYSPEDKELKKI 265
++ +E L + G I + V V N + + Y D EL I
Sbjct: 127 IICQEISTLCDMLATHN------GQSIDISFPVFVAVTNVISLICFNTSYKNGDPELNVI 180
Query: 266 QSLLTELFANIDMVGALFSQFPILRYVAPEMSGYKSFVSIHQKVWKFLRNELDNHKETFN 325
Q+ + N+ +L P L+ + S + L L+N+KE F
Sbjct: 181 QNYNEGIIDNL-SKDSLVDLVPWLKIFPN--KTLEKLKSHVKIRNDLLNKILENYKEKFR 237
Query: 326 PDEMRDIMDVYLKTLKSEDKTD--------TFSESQLLAICMDMFMAGSETT-TTL---- 372
D + +++D ++ + D + S++ +L D+F AG ETT + +
Sbjct: 238 SDSITNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTL 297
Query: 373 ----------------------PSRHVNSHDMIVCFYLNRYLTSSMYTRSRRSLVQTLPY 410
SR D R+R L
Sbjct: 298 AFLLHNPQVKKKLYEEIDQNVGFSRTPTISD-----------------RNR------LLL 334
Query: 411 LEAITYESVRVFMGRT---FSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDP 467
LEA E +R+ R IPH+A D+++ + + K T +I N + +++ WH P
Sbjct: 335 LEATIREVLRL---RPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQP 391
Query: 468 EVFRPERFLNDKGAIQV--PDQYLPFGAGP 495
+ F PERFLN G + YLPFGAGP
Sbjct: 392 DQFMPERFLNPAGTQLISPSVSYLPFGAGP 421
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase;
HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Length = 479
Score = 340 bits (874), Expect = e-108
Identities = 105/342 (30%), Positives = 163/342 (47%), Gaps = 17/342 (4%)
Query: 487 QYLPFGAGPDRLLVTDE-QLWVEQRRFVLRQLREFGFGKRTMAQLVEEEAYQLVQLFKQE 545
Q L FG + + W EQRRF + LR G GK+++ Q V EEA L F
Sbjct: 86 QILGFGPRSQGVFLARYGPAWREQRRFSVSTLRNLGLGKKSLEQWVTEEAACLCAAFANH 145
Query: 546 VQDGGAIIPMRDAFSVPVLNTLWSMLAGIRYSPEDKELKKIQSLLTELFANID-MVGALF 604
G V N + S+ G R+ +D ++ L E + +
Sbjct: 146 ---SGRPFRPNGLLDKAVSNVIASLTCGRRFEYDDPRFLRLLDLAQEGLKEESGFLREVL 202
Query: 605 SQFPILRYVAPEMSGYKSFVSIHQKVWKFLRNELDNHKETFNPDEM-RDIMDVYLKTLKS 663
+ P+L ++ P + + + L L H+ T++P + RD+ + +L ++
Sbjct: 203 NAVPVLLHI-P--ALAGKVLRFQKAFLTQLDELLTEHRMTWDPAQPPRDLTEAFLAEMEK 259
Query: 664 E--DKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGR 721
+ +F++ L + D+F AG TTS +L +G L ++LHPDVQ++ Q EID V+G+
Sbjct: 260 AKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQ 319
Query: 722 DRLPSLNDRPHMPYLEAITYESVRVFMGRT---FSIPHRALRDTTLQGYFIPKDTMIIAN 778
R P + D+ HMPY A+ +E R + H RD +QG+ IPK T +I N
Sbjct: 320 VRRPEMGDQAHMPYTTAVIHEVQRF---GDIVPLGVTHMTSRDIEVQGFRIPKGTTLITN 376
Query: 779 FNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAGR 820
+ VL D+ W P F PE FL+ +G P+ +LPF AGR
Sbjct: 377 LSSVLKDEAVWEKPFRFHPEHFLDAQGHFVKPEAFLPFSAGR 418
Score = 298 bits (766), Expect = 8e-93
Identities = 111/504 (22%), Positives = 176/504 (34%), Gaps = 127/504 (25%)
Query: 28 KKPRNFPPGPDWIPILGSALAIQKLRNQTGYLYQACAELSKQYGPVVGLRVGKDRQVVCF 87
PPGP +P LG+ L + +L +++G V L++ VV
Sbjct: 6 SSKGKLPPGPLPLPGLGNLLHVD-----FQNTPYCFDQLRRRFGDVFSLQLAWTPVVVLN 60
Query: 88 GYPAIKEMLSK--EEFDGRPRGPFYETRTWGKRQGLMEGTVTAKVLSSLKRREKEDRIGE 145
G A++E L E+ RP P + +G R
Sbjct: 61 GLAAVREALVTHGEDTADRPPVPITQILGFGPRSQ------------------------- 95
Query: 146 SQPFRERAGIKPVTALGYKVDVLLSKAGLLVTDEQLWVEQRRFVLRQLREFGFGKRTMAQ 205
V L++ G W EQRRF + LR G GK+++ Q
Sbjct: 96 --------------------GVFLARYG------PAWREQRRFSVSTLRNLGLGKKSLEQ 129
Query: 206 LVEEEAYQLVQLFKQEVQHLSLPGAIIPMRDAFSVPVLNTLWSMLAGIRYSPEDKELKKI 265
V EEA L F G V N + S+ G R+ +D ++
Sbjct: 130 WVTEEAACLCAAFANHS------GRPFRPNGLLDKAVSNVIASLTCGRRFEYDDPRFLRL 183
Query: 266 QSLLTELFANID-MVGALFSQFPILRYVAPEMSGYKSFVSIHQKVWKFLRNELDNHKETF 324
L E + + + P+L ++ P + + + L L H+ T+
Sbjct: 184 LDLAQEGLKEESGFLREVLNAVPVLLHI-P--ALAGKVLRFQKAFLTQLDELLTEHRMTW 240
Query: 325 NPDEM-RDIMDVYLKTLKSE--DKTDTFSESQLLAICMDMFMAGSETT-TTL-------- 372
+P + RD+ + +L ++ + +F++ L + D+F AG TT TTL
Sbjct: 241 DPAQPPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMI 300
Query: 373 ------------------PSRHVNSHDMIVCFYLNRYLTSSMYTRSRRSLVQTLPYLEAI 414
R D ++ +PY A+
Sbjct: 301 LHPDVQRRVQQEIDDVIGQVRRPEMGD-----------------QAH------MPYTTAV 337
Query: 415 TYESVRVFMGRT---FSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFR 471
+E R + H RD +QG+ IPK T +I N + VL D+ W P F
Sbjct: 338 IHEVQRF---GDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFH 394
Query: 472 PERFLNDKGAIQVPDQYLPFGAGP 495
PE FL+ +G P+ +LPF AG
Sbjct: 395 PEHFLDAQGHFVKPEAFLPFSAGR 418
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing
enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8-
benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo
sapiens}
Length = 495
Score = 338 bits (869), Expect = e-107
Identities = 98/329 (29%), Positives = 154/329 (46%), Gaps = 16/329 (4%)
Query: 504 QLWVEQRRFVLRQLREFGFGKRT-------MAQLVEEEAYQLVQLFKQEVQDGGAIIPMR 556
+W +RR L F + + V +EA L+ QE+ G
Sbjct: 107 PVWAARRRLAQNALNTFSIASDPASSSSCYLEEHVSKEAKALISRL-QELMAGPGHFDPY 165
Query: 557 DAFSVPVLNTLWSMLAGIRYSPEDKELKKIQSLLTELFANIDMVGALFSQFPILRYVAPE 616
+ V V N + +M G + E+ + E G FPILRY+ P
Sbjct: 166 NQVVVSVANVIGAMCFGQHFPESSDEMLSLVKNTHEFV-ETASSGNPLDFFPILRYL-P- 222
Query: 617 MSGYKSFVSIHQKVWKFLRNELDNHKETFNPDEMRDIMDVYLKTLK--SEDKTDTFSESQ 674
+ F + +Q+ FL+ + H + F+ + +RDI K K + + +
Sbjct: 223 NPALQRFKAFNQRFLWFLQKTVQEHYQDFDKNSVRDITGALFKHSKKGPRASGNLIPQEK 282
Query: 675 LLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDRLPSLNDRPHMP 734
++ + D+F AG +T + ++ + +YL+ P++Q+K Q E+D V+GR+R P L+DRP +P
Sbjct: 283 IVNLVNDIFGAGFDTVTTAISWSLMYLVTKPEIQRKIQKELDTVIGRERRPRLSDRPQLP 342
Query: 735 YLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEV 794
YLEA E+ R F+IPH RDTTL G++IPK + N V D E W DP
Sbjct: 343 YLEAFILETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWEDPSE 402
Query: 795 FRPERFLNDKGAI---QVPDQYLPFGAGR 820
FRPERFL G + ++ + FG G+
Sbjct: 403 FRPERFLTADGTAINKPLSEKMMLFGMGK 431
Score = 242 bits (620), Expect = 2e-71
Identities = 86/355 (24%), Positives = 130/355 (36%), Gaps = 69/355 (19%)
Query: 180 QLWVEQRRFVLRQLREFGFGKRT-------MAQLVEEEAYQLVQLFKQEVQHLSLPGAII 232
+W +RR L F + + V +EA L+ ++ + PG
Sbjct: 107 PVWAARRRLAQNALNTFSIASDPASSSSCYLEEHVSKEAKALISRLQELMAG---PGHFD 163
Query: 233 PMRDAFSVPVLNTLWSMLAGIRYSPEDKELKKIQSLLTELFANIDMVGALFSQFPILRYV 292
P V V N + +M G + E+ + E G FPILRY+
Sbjct: 164 PYNQ-VVVSVANVIGAMCFGQHFPESSDEMLSLVKNTHEFV-ETASSGNPLDFFPILRYL 221
Query: 293 APEMSGYKSFVSIHQKVWKFLRNELDNHKETFNPDEMRDIMDVYLKTLK--SEDKTDTFS 350
P + F + +Q+ FL+ + H + F+ + +RDI K K +
Sbjct: 222 -P-NPALQRFKAFNQRFLWFLQKTVQEHYQDFDKNSVRDITGALFKHSKKGPRASGNLIP 279
Query: 351 ESQLLAICMDMFMAGSETT-TTL--------------------------PSRHVNSHDMI 383
+ +++ + D+F AG +T T + R D
Sbjct: 280 QEKIVNLVNDIFGAGFDTVTTAISWSLMYLVTKPEIQRKIQKELDTVIGRERRPRLSD-- 337
Query: 384 VCFYLNRYLTSSMYTRSRRSLVQTLPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYF 443
R + LPYLEA E+ R F+IPH RDTTL G++
Sbjct: 338 ---------------RPQ------LPYLEAFILETFRHSSFLPFTIPHSTTRDTTLNGFY 376
Query: 444 IPKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAI---QVPDQYLPFGAGP 495
IPK + N V D E W DP FRPERFL G + ++ + FG G
Sbjct: 377 IPKKCCVFVNQWQVNHDPELWEDPSEFRPERFLTADGTAINKPLSEKMMLFGMGK 431
Score = 85.3 bits (212), Expect = 2e-17
Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 10/101 (9%)
Query: 21 ILAYLDTKKPRNF--PPGPDWIPILGSALAIQKLRNQTGYLYQACAELSKQYGPVVGLRV 78
+L L + P+ PP P P+LG L + K + A + +S++YG V+ +R+
Sbjct: 3 VLKGLRPRVPKGLKSPPEPWGWPLLGHVLTLGK------NPHLALSRMSQRYGDVLQIRI 56
Query: 79 GKDRQVVCFGYPAIKEMLSK--EEFDGRPRGPFYETRTWGK 117
G +V I++ L + ++F GRP T G+
Sbjct: 57 GSTPVLVLSRLDTIRQALVRQGDDFKGRPDLYTSTLITDGQ 97
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase,
alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase;
HET: HEM BHF; 2.70A {Homo sapiens}
Length = 507
Score = 336 bits (864), Expect = e-107
Identities = 100/334 (29%), Positives = 160/334 (47%), Gaps = 22/334 (6%)
Query: 504 QLWVEQRRFVLRQLREF----GFGKRTMAQLVEEEAYQLVQLFKQEVQDGGAIIPMRDAF 559
+ W QRR +R F ++ + V EA +LV L + DG + P
Sbjct: 99 EHWKVQRRAAHSMMRNFFTRQPRSRQVLEGHVLSEARELVALLVRGSADGAFLDPRPL-T 157
Query: 560 SVPVLNTLWSMLAGIRYSPEDKELKKIQSLLTELFANIDMVGALFSQFPILRYV-APEMS 618
V V N + ++ G RYS +D E +++ S E + G+L P L+Y P +
Sbjct: 158 VVAVANVMSAVCFGCRYSHDDPEFRELLSHNEEFGRTVGA-GSLVDVMPWLQYFPNPVRT 216
Query: 619 GYKSFVSIHQKVWKFLRNELDNHKETFNPDEM-RDIMDVYL------KTLKSEDKTDTFS 671
++ F +++ F+ ++ H E+ P RD+MD ++ S
Sbjct: 217 VFREFEQLNRNFSNFILDKFLRHCESLRPGAAPRDMMDAFILSAEKKAAGDSHGGGARLD 276
Query: 672 ESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDRLPSLNDRP 731
+ A D+F A +T S +L + L +PDVQ + QAE+D+VVGRDRLP + D+P
Sbjct: 277 LENVPATITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDRLPCMGDQP 336
Query: 732 HMPYLEAITYESVRVFMGRT---FSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEF 788
++PY+ A YE++R + +IPH +T++ GY IPKDT++ N V D
Sbjct: 337 NLPYVLAFLYEAMRF---SSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLK 393
Query: 789 WHDPEVFRPERFLNDKGAI--QVPDQYLPFGAGR 820
W +PE F P RFL+ G I + + + F G+
Sbjct: 394 WPNPENFDPARFLDKDGLINKDLTSRVMIFSVGK 427
Score = 292 bits (751), Expect = 3e-90
Identities = 109/514 (21%), Positives = 178/514 (34%), Gaps = 137/514 (26%)
Query: 28 KKPRNFPPGPDWIPILGSALAIQKLRNQTGYLYQACAELSKQYGPVVGLRVGKDRQVVCF 87
+ PPGP P++G+A A+ + + + A L+++YG V +R+G VV
Sbjct: 5 TSSKGKPPGPFAWPLIGNAAAVGQ------AAHLSFARLARRYGDVFQIRLGSCPIVVLN 58
Query: 88 GYPAIKEMLSK--EEFDGRPRGPFYETRTWGKRQGLMEGTVTAKVLSSLKRREKEDRIGE 145
G AI + L + F RP + + G+
Sbjct: 59 GERAIHQALVQQGSAFADRPSFASFRVVSGGR---------------------------- 90
Query: 146 SQPFRERAGIKPVTALGYKVDVLLSKAGLLVTDEQLWVEQRRFVLRQLREF----GFGKR 201
+ + W QRR +R F ++
Sbjct: 91 --------------------SMAFGHYS------EHWKVQRRAAHSMMRNFFTRQPRSRQ 124
Query: 202 TMAQLVEEEAYQLVQLFKQEVQHLSLPGAIIPMRDAFSVPVLNTLWSMLAGIRYSPEDKE 261
+ V EA +LV L + GA + R V V N + ++ G RYS +D E
Sbjct: 125 VLEGHVLSEARELVALLVRGSAD----GAFLDPRPLTVVAVANVMSAVCFGCRYSHDDPE 180
Query: 262 LKKIQSLLTELFANIDMVGALFSQFPILRYV-APEMSGYKSFVSIHQKVWKFLRNELDNH 320
+++ S E + G+L P L+Y P + ++ F +++ F+ ++ H
Sbjct: 181 FRELLSHNEEFGRTVGA-GSLVDVMPWLQYFPNPVRTVFREFEQLNRNFSNFILDKFLRH 239
Query: 321 KETFNPDEM-RDIMDVYL------KTLKSEDKTDTFSESQLLAICMDMFMAGSETT-TTL 372
E+ P RD+MD ++ S + A D+F A +T T L
Sbjct: 240 CESLRPGAAPRDMMDAFILSAEKKAAGDSHGGGARLDLENVPATITDIFGASQDTLSTAL 299
Query: 373 --------------------------PSRHVNSHDMIVCFYLNRYLTSSMYTRSRRSLVQ 406
R D +
Sbjct: 300 QWLLLLFTRYPDVQTRVQAELDQVVGRDRLPCMGD-----------------QPN----- 337
Query: 407 TLPYLEAITYESVRVFMGRT---FSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEF 463
LPY+ A YE++R + +IPH +T++ GY IPKDT++ N V D
Sbjct: 338 -LPYVLAFLYEAMRF---SSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLK 393
Query: 464 WHDPEVFRPERFLNDKGAI--QVPDQYLPFGAGP 495
W +PE F P RFL+ G I + + + F G
Sbjct: 394 WPNPENFDPARFLDKDGLINKDLTSRVMIFSVGK 427
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase,
acetaminophen, oxidoreductase, heme, endoplasmic
reticulum, iron, membrane; HET: HEM; 2.20A {Homo
sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Length = 476
Score = 334 bits (860), Expect = e-106
Identities = 95/324 (29%), Positives = 166/324 (51%), Gaps = 16/324 (4%)
Query: 504 QLWVEQRRFVLRQLREFGFGKRTMAQLVEEEAYQLVQLFKQEVQDGGAIIPMRDAFSVPV 563
W + RRF L LR +G GK+ ++ EA+ L++ ++ G P
Sbjct: 99 PTWKDIRRFSLTTLRNYGMGKQGNESRIQREAHFLLEALRKT--QGQPFDPTFL-IGCAP 155
Query: 564 LNTLWSMLAGIRYSPEDKELKKIQSLLTELFANID-MVGALFSQFP-ILRYVAPEMSGYK 621
N + +L + D++ ++ L E F + L++ FP L Y+ P ++
Sbjct: 156 CNVIADILFRKHFDYNDEKFLRLMYLFNENFHLLSTPWLQLYNNFPSFLHYL-P--GSHR 212
Query: 622 SFVSIHQKVWKFLRNELDNHKETFNPDEMRDIMDVYLKTLKSE--DKTDTFSESQLLAIC 679
+ +V +++ + H ++ +P+ RD+ D L ++ E ++ +
Sbjct: 213 KVIKNVAEVKEYVSERVKEHHQSLDPNCPRDLTDCLLVEMEKEKHSAERLYTMDGITVTV 272
Query: 680 MDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDRLPSLNDRPHMPYLEAI 739
D+F AG+ETTS +L +G L L+ +P++++K EIDRV+G R+P++ DR MPY++A+
Sbjct: 273 ADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSRIPAIKDRQEMPYMDAV 332
Query: 740 TYESVRVFMGRT---FSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFR 796
+E R T ++PH A RDT +GY IPK T+++ + VL D + + DPE F+
Sbjct: 333 VHEIQRF---ITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFK 389
Query: 797 PERFLNDKGAIQVPDQYLPFGAGR 820
PE FLN+ G + D + PF G+
Sbjct: 390 PEHFLNENGKFKYSDYFKPFSTGK 413
Score = 242 bits (620), Expect = 9e-72
Identities = 84/357 (23%), Positives = 148/357 (41%), Gaps = 69/357 (19%)
Query: 173 GLLVTDEQLWVEQRRFVLRQLREFGFGKRTMAQLVEEEAYQLVQLFKQEVQHLSLPGAII 232
G++ + W + RRF L LR +G GK+ ++ EA+ L++ ++ G
Sbjct: 92 GIIFNNGPTWKDIRRFSLTTLRNYGMGKQGNESRIQREAHFLLEALRKTQ------GQPF 145
Query: 233 PMRDAFSVPVLNTLWSMLAGIRYSPEDKELKKIQSLLTELFANID-MVGALFSQFP-ILR 290
N + +L + D++ ++ L E F + L++ FP L
Sbjct: 146 DPTFLIGCAPCNVIADILFRKHFDYNDEKFLRLMYLFNENFHLLSTPWLQLYNNFPSFLH 205
Query: 291 YVAPEMSGYKSFVSIHQKVWKFLRNELDNHKETFNPDEMRDIMDVYLKTLKSE--DKTDT 348
Y+ P ++ + +V +++ + H ++ +P+ RD+ D L ++ E
Sbjct: 206 YL-P--GSHRKVIKNVAEVKEYVSERVKEHHQSLDPNCPRDLTDCLLVEMEKEKHSAERL 262
Query: 349 FSESQLLAICMDMFMAGSETT-TTL--------------------------PSRHVNSHD 381
++ + D+F AG+ETT TTL PSR
Sbjct: 263 YTMDGITVTVADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSRIP---- 318
Query: 382 MIVCFYLNRYLTSSMYTRSRRSLVQTLPYLEAITYESVRVFMGRT---FSIPHRALRDTT 438
++ R +PY++A+ +E R T ++PH A RDT
Sbjct: 319 -------------AIKDRQE------MPYMDAVVHEIQRF---ITLVPSNLPHEATRDTI 356
Query: 439 LQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAGP 495
+GY IPK T+++ + VL D + + DPE F+PE FLN+ G + D + PF G
Sbjct: 357 FRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHFLNENGKFKYSDYFKPFSTGK 413
Score = 80.7 bits (200), Expect = 5e-16
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
Query: 28 KKPRNFPPGPDWIPILGSALAIQKLRNQTGYLYQACAELSKQYGPVVGLRVGKDRQVVCF 87
PPGP +PI+G+ ++ + ++ L++++GPV L VG R VV
Sbjct: 6 SSKGKLPPGPFPLPIIGNLFQLE-----LKNIPKSFTRLAQRFGPVFTLYVGSQRMVVMH 60
Query: 88 GYPAIKEMLSK--EEFDGRPRGPFYET 112
GY A+KE L +EF GR P +
Sbjct: 61 GYKAVKEALLDYKDEFSGRGDLPAFHA 87
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme,
oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP:
a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A*
2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Length = 477
Score = 333 bits (856), Expect = e-106
Identities = 97/324 (29%), Positives = 162/324 (50%), Gaps = 16/324 (4%)
Query: 504 QLWVEQRRFVLRQLREFGFGKRTMAQLVEEEAYQLVQLFKQEVQDGGAIIPMRDAFSVPV 563
+ W E RRF L LR FG GKR++ V+EEA LV+ ++ P
Sbjct: 101 KKWKEIRRFSLMTLRNFGMGKRSIEDRVQEEARCLVEELRK--TKASPCDPTFI-LGCAP 157
Query: 564 LNTLWSMLAGIRYSPEDKELKKIQSLLTELFANID-MVGALFSQF-PILRYVAPEMSGYK 621
N + S++ R+ +D++ + L E + + + F PI+ Y P +
Sbjct: 158 CNVICSIIFHKRFDYKDQQFLNLMEKLNENIKILSSPWIQICNNFSPIIDYF-P--GTHN 214
Query: 622 SFVSIHQKVWKFLRNELDNHKETFNPDEMRDIMDVYLKTLKSE--DKTDTFSESQLLAIC 679
+ + ++ ++ H+E+ + + +D +D +L ++ E ++ F+ L
Sbjct: 215 KLLKNVAFMKSYILEKVKEHQESMDMNNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTA 274
Query: 680 MDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDRLPSLNDRPHMPYLEAI 739
+D+F AG+ETTS +L + L LL HP+V K Q EI+RV+GR+R P + DR HMPY +A+
Sbjct: 275 VDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAV 334
Query: 740 TYESVRVFMGRT---FSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFR 796
+E R S+PH D + Y IPK T I+ + VL D + + +PE+F
Sbjct: 335 VHEVQRY---IDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFD 391
Query: 797 PERFLNDKGAIQVPDQYLPFGAGR 820
P FL++ G + ++PF AG+
Sbjct: 392 PHHFLDEGGNFKKSKYFMPFSAGK 415
Score = 239 bits (612), Expect = 1e-70
Identities = 82/357 (22%), Positives = 146/357 (40%), Gaps = 69/357 (19%)
Query: 173 GLLVTDEQLWVEQRRFVLRQLREFGFGKRTMAQLVEEEAYQLVQLFKQEVQHLSLPGAII 232
G++ ++ + W E RRF L LR FG GKR++ V+EEA LV+ ++ +
Sbjct: 94 GIVFSNGKKWKEIRRFSLMTLRNFGMGKRSIEDRVQEEARCLVEELRKTK------ASPC 147
Query: 233 PMRDAFSVPVLNTLWSMLAGIRYSPEDKELKKIQSLLTELFANID-MVGALFSQF-PILR 290
N + S++ R+ +D++ + L E + + + F PI+
Sbjct: 148 DPTFILGCAPCNVICSIIFHKRFDYKDQQFLNLMEKLNENIKILSSPWIQICNNFSPIID 207
Query: 291 YVAPEMSGYKSFVSIHQKVWKFLRNELDNHKETFNPDEMRDIMDVYLKTLKSE--DKTDT 348
Y P + + + ++ ++ H+E+ + + +D +D +L ++ E ++
Sbjct: 208 YF-P--GTHNKLLKNVAFMKSYILEKVKEHQESMDMNNPQDFIDCFLMKMEKEKHNQPSE 264
Query: 349 FSESQLLAICMDMFMAGSETT-TTL--------------------------PSRHVNSHD 381
F+ L +D+F AG+ETT TTL +R
Sbjct: 265 FTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSP---- 320
Query: 382 MIVCFYLNRYLTSSMYTRSRRSLVQTLPYLEAITYESVRVFMGRT---FSIPHRALRDTT 438
M RS +PY +A+ +E R S+PH D
Sbjct: 321 -------------CMQDRSH------MPYTDAVVHEVQRY---IDLLPTSLPHAVTCDIK 358
Query: 439 LQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAGP 495
+ Y IPK T I+ + VL D + + +PE+F P FL++ G + ++PF AG
Sbjct: 359 FRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNFKKSKYFMPFSAGK 415
Score = 81.4 bits (202), Expect = 3e-16
Identities = 33/92 (35%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
Query: 28 KKPRNFPPGPDWIPILGSALAIQKLRNQTGYLYQACAELSKQYGPVVGLRVGKDRQVVCF 87
PPGP +P++G+ L I + ++ LSK YGPV L G VV
Sbjct: 7 SGRGKLPPGPTPLPVIGNILQIG-----IKDISKSLTNLSKVYGPVFTLYFGLKPIVVLH 61
Query: 88 GYPAIKEMLSK--EEFDGRPRGPFYETRTWGK 117
GY A+KE L EEF GR P E G
Sbjct: 62 GYEAVKEALIDLGEEFSGRGIFPLAERANRGF 93
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing
enzyme, coumarin 7-hydroxylase, nicotine oxidase,
oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB:
1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A*
2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Length = 476
Score = 331 bits (852), Expect = e-105
Identities = 98/324 (30%), Positives = 172/324 (53%), Gaps = 16/324 (4%)
Query: 504 QLWVEQRRFVLRQLREFGFGKRTMAQLVEEEAYQLVQLFKQEVQDGGAIIPMRDAFSVPV 563
+ + RRF + LR+FG GKR + + ++EEA L+ + GGA I S V
Sbjct: 100 ERAKQLRRFSIATLRDFGVGKRGIEERIQEEAGFLIDALRGT---GGANIDPTFFLSRTV 156
Query: 564 LNTLWSMLAGIRYSPEDKELKKIQSLLTELFANID-MVGALFSQFP-ILRYVAPEMSGYK 621
N + S++ G R+ +DKE + ++ +F G L+ F +++++ P +
Sbjct: 157 SNVISSIVFGDRFDYKDKEFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHL-P--GPQQ 213
Query: 622 SFVSIHQKVWKFLRNELDNHKETFNPDEMRDIMDVYLKTLKSE--DKTDTFSESQLLAIC 679
+ Q + F+ ++++++ T +P+ RD +D +L ++ E + F L+
Sbjct: 214 QAFQLLQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTT 273
Query: 680 MDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDRLPSLNDRPHMPYLEAI 739
+++F+ G+ET S +L +GFL L+ HP+V+ K EIDRV+G++R P DR MPY+EA+
Sbjct: 274 LNLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAV 333
Query: 740 TYESVRVFMGRT---FSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFR 796
+E R S+ R +DT + +F+PK T + VL D F+ +P+ F
Sbjct: 334 IHEIQRF---GDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFN 390
Query: 797 PERFLNDKGAIQVPDQYLPFGAGR 820
P+ FLN+KG + D ++PF G+
Sbjct: 391 PQHFLNEKGQFKKSDAFVPFSIGK 414
Score = 238 bits (611), Expect = 2e-70
Identities = 83/356 (23%), Positives = 156/356 (43%), Gaps = 69/356 (19%)
Query: 173 GLLVTDEQLWVEQRRFVLRQLREFGFGKRTMAQLVEEEAYQLVQLFKQEVQHLSLPGAII 232
G++ ++ + + RRF + LR+FG GKR + + ++EEA L+ + GA I
Sbjct: 93 GVVFSNGERAKQLRRFSIATLRDFGVGKRGIEERIQEEAGFLIDALRGTG------GANI 146
Query: 233 PMRDAFSVPVLNTLWSMLAGIRYSPEDKELKKIQSLLTELFANID-MVGALFSQFP-ILR 290
S V N + S++ G R+ +DKE + ++ +F G L+ F +++
Sbjct: 147 DPTFFLSRTVSNVISSIVFGDRFDYKDKEFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMK 206
Query: 291 YVAPEMSGYKSFVSIHQKVWKFLRNELDNHKETFNPDEMRDIMDVYLKTLKSE--DKTDT 348
++ P + + Q + F+ ++++++ T +P+ RD +D +L ++ E +
Sbjct: 207 HL-P--GPQQQAFQLLQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTE 263
Query: 349 FSESQLLAICMDMFMAGSETT-TTL--------------------------PSRHVNSHD 381
F L+ +++F+ G+ET TTL +R D
Sbjct: 264 FYLKNLVMTTLNLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFED 323
Query: 382 MIVCFYLNRYLTSSMYTRSRRSLVQTLPYLEAITYESVRVFMGRT---FSIPHRALRDTT 438
R++ +PY+EA+ +E R S+ R +DT
Sbjct: 324 -----------------RAK------MPYMEAVIHEIQRF---GDVIPMSLARRVKKDTK 357
Query: 439 LQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAG 494
+ +F+PK T + VL D F+ +P+ F P+ FLN+KG + D ++PF G
Sbjct: 358 FRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDAFVPFSIG 413
Score = 81.4 bits (202), Expect = 3e-16
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 28 KKPRNFPPGPDWIPILGSALAIQKLRNQTGYLYQACAELSKQYGPVVGLRVGKDRQVVCF 87
PPGP +P +G+ L + T +Y + ++S++YGPV + +G R VV
Sbjct: 6 SSKGKLPPGPTPLPFIGNYLQLN-----TEQMYNSLMKISERYGPVFTIHLGPRRVVVLC 60
Query: 88 GYPAIKEMLSK--EEFDGRPRGPFYETRTWGK 117
G+ A++E L EEF GR ++ G
Sbjct: 61 GHDAVREALVDQAEEFSGRGEQATFDWVFKGY 92
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP
LM2, cytochro monooxygenase; HET: HEM; 1.60A
{Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A*
2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A*
3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Length = 476
Score = 331 bits (852), Expect = e-105
Identities = 98/321 (30%), Positives = 171/321 (53%), Gaps = 10/321 (3%)
Query: 504 QLWVEQRRFVLRQLREFGFGKRTMAQLVEEEAYQLVQLFKQEVQDGGAIIPMRDAFSVPV 563
+ W RRF L +R+FG GKR++ + ++EEA LV+ ++ GA++ F
Sbjct: 100 ERWRALRRFSLATMRDFGMGKRSVEERIQEEARCLVEELRKS---KGALLDNTLLFHSIT 156
Query: 564 LNTLWSMLAGIRYSPEDKELKKIQSLLTELFANID-MVGALFSQFP-ILRYVAPEMSGYK 621
N + S++ G R+ +D ++ L + F+ I +F F L++ P ++
Sbjct: 157 SNIICSIVFGKRFDYKDPVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKHF-P--GTHR 213
Query: 622 SFVSIHQKVWKFLRNELDNHKETFNPDEMRDIMDVYLKTLKSE--DKTDTFSESQLLAIC 679
Q++ F+ ++ H+ T +P RD +DVYL ++ + D + F L+
Sbjct: 214 QIYRNLQEINTFIGQSVEKHRATLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTV 273
Query: 680 MDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDRLPSLNDRPHMPYLEAI 739
+ +F AG+ETTS +L +GFL +L +P V ++ Q EI++V+G R P+L+DR MPY +A+
Sbjct: 274 LSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAV 333
Query: 740 TYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPER 799
+E R+ F +PH +DT +GY IPK+T + + L D ++ P F P
Sbjct: 334 IHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGH 393
Query: 800 FLNDKGAIQVPDQYLPFGAGR 820
FL+ GA++ + ++PF G+
Sbjct: 394 FLDANGALKRNEGFMPFSLGK 414
Score = 240 bits (614), Expect = 6e-71
Identities = 87/347 (25%), Positives = 158/347 (45%), Gaps = 51/347 (14%)
Query: 173 GLLVTDEQLWVEQRRFVLRQLREFGFGKRTMAQLVEEEAYQLVQLFKQEVQHLSLPGAII 232
G++ + + W RRF L +R+FG GKR++ + ++EEA LV+ ++ GA++
Sbjct: 93 GVIFANGERWRALRRFSLATMRDFGMGKRSVEERIQEEARCLVEELRKSK------GALL 146
Query: 233 PMRDAFSVPVLNTLWSMLAGIRYSPEDKELKKIQSLLTELFANID-MVGALFSQFP-ILR 290
F N + S++ G R+ +D ++ L + F+ I +F F L+
Sbjct: 147 DNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFFQSFSLISSFSSQVFELFSGFLK 206
Query: 291 YVAPEMSGYKSFVSIHQKVWKFLRNELDNHKETFNPDEMRDIMDVYLKTLKSE--DKTDT 348
+ P ++ Q++ F+ ++ H+ T +P RD +DVYL ++ + D +
Sbjct: 207 HF-P--GTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPRDFIDVYLLRMEKDKSDPSSE 263
Query: 349 FSESQLLAICMDMFMAGSETT-TTL----------PS----------RHVNSHDMIVCFY 387
F L+ + +F AG+ETT TTL P + + SH
Sbjct: 264 FHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPP---- 319
Query: 388 LNRYLTSSMYTRSRRSLVQTLPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKD 447
++ R++ +PY +A+ +E R+ F +PH +DT +GY IPK+
Sbjct: 320 -------ALDDRAK------MPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKN 366
Query: 448 TMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAG 494
T + + L D ++ P F P FL+ GA++ + ++PF G
Sbjct: 367 TEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLG 413
Score = 81.1 bits (201), Expect = 4e-16
Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 7/92 (7%)
Query: 28 KKPRNFPPGPDWIPILGSALAIQKLRNQTGYLYQACAELSKQYGPVVGLRVGKDRQVVCF 87
PPGP +P+LG+ L + L ++ L ++YG V + +G VV
Sbjct: 6 SSKGKLPPGPSPLPVLGNLLQMD-----RKGLLRSFLRLREKYGDVFTVYLGSRPVVVLC 60
Query: 88 GYPAIKEMLSK--EEFDGRPRGPFYETRTWGK 117
G AI+E L E F GR + + G
Sbjct: 61 GTDAIREALVDQAEAFSGRGKIAVVDPIFQGY 92
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET:
HEM 3QZ; 3.00A {Bos taurus}
Length = 496
Score = 318 bits (817), Expect = e-100
Identities = 75/326 (23%), Positives = 137/326 (42%), Gaps = 25/326 (7%)
Query: 504 QLWVEQRRFVLRQLREFGFGKRTMAQLVEEEAYQLVQLFKQEVQDGGAIIPMRDAFSVPV 563
LW ++ L + +M V++ + + + Q G + ++ FS+
Sbjct: 115 LLWKAHKKLTRSALL--LGTRSSMEPWVDQLTQEFCERMRV--QAGAPVTIQKE-FSLLT 169
Query: 564 LNTLWSMLAGIRYSPEDKELKKIQSLLTELFANIDMVGALFSQFPILRYVAPEMSGYKSF 623
+ + + G + L + + + + P LR+ P G
Sbjct: 170 CSIICYLTFGNKEDTLVHAFHDCVQDLMKTWDH--WSIQILDMVPFLRFF-P-NPGLWRL 225
Query: 624 VSIHQKVWKFLRNELDNHKETFNPDEMRDIMDVYLKTL---KSEDKTDTFSESQLLAICM 680
+ + +L HKE+ + RD+ D L+ + + E+ E + +
Sbjct: 226 KQAIENRDHMVEKQLRRHKESMVAGQWRDMTDYMLQGVGRQRVEEGPGQLLEGHVHMSVV 285
Query: 681 DMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRD---RLPSLNDRPHMPYLE 737
D+F+ G+ETT+ +L + +LL HP++Q++ Q E+DR +G + DR +P L
Sbjct: 286 DLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPGASCSRVTYKDRARLPLLN 345
Query: 738 AITYESVRVFMGRT---FSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEV 794
A E +R+ R ++PHR R +++ GY IP+ ++I N G +D+ W P
Sbjct: 346 ATIAEVLRL---RPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAHLDETVWEQPHE 402
Query: 795 FRPERFLNDKGAIQVPDQYLPFGAGR 820
FRP+RFL L FG G
Sbjct: 403 FRPDRFLEPGAN----PSALAFGCGA 424
Score = 272 bits (699), Expect = 8e-83
Identities = 94/527 (17%), Positives = 170/527 (32%), Gaps = 141/527 (26%)
Query: 7 VMWFEIFLVFVIICILAYLDTKKPRNFPPGPDWIPILGSALAIQKLRNQTGYLYQACAEL 66
++ + L+ ++ L + P P++ L + L L
Sbjct: 1 MVLAGLLLLLTLLAGAHLLWGRWKLRNLHLP---PLVPGFLHLL-----QPNLPIHLLSL 52
Query: 67 SKQYGPVVGLRVGKDRQVVCFGYPAIKEMLSK--EEFDGRPRGPFYETRTWGKRQGLMEG 124
+++ GPV LR+G VV I+E + + +F GRP+ P Y+ + +
Sbjct: 53 TQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRPQIPSYKLVSQRCQ------ 106
Query: 125 TVTAKVLSSLKRREKEDRIGESQPFRERAGIKPVTALGYKVDVLLSKAGLLVTDEQLWVE 184
D+ L LW
Sbjct: 107 -----------------------------------------DISLGDYS------LLWKA 119
Query: 185 QRRFVLRQLREFGFGKRTMAQLVEEEAYQLVQLFKQEVQHLSLPGAIIPMRDAFSVPVLN 244
++ L + +M V++ + + + + GA + ++ FS+ +
Sbjct: 120 HKKLTRSALL--LGTRSSMEPWVDQLTQEFCERMRVQA------GAPVTIQKEFSLLTCS 171
Query: 245 TLWSMLAGIRYSPEDKELKKIQSLLTELFANIDMVGALFSQFPILRYVAPEMSGYKSFVS 304
+ + G + L + + + + P LR+ P G
Sbjct: 172 IICYLTFGNKEDTLVHAFHDCVQDLMKTWDH--WSIQILDMVPFLRFF-P-NPGLWRLKQ 227
Query: 305 IHQKVWKFLRNELDNHKETFNPDEMRDIMDVYLKTL---KSEDKTDTFSESQLLAICMDM 361
+ + +L HKE+ + RD+ D L+ + + E+ E + +D+
Sbjct: 228 AIENRDHMVEKQLRRHKESMVAGQWRDMTDYMLQGVGRQRVEEGPGQLLEGHVHMSVVDL 287
Query: 362 FMAGSETT-TTL-----------------------------PSRHVNSHDMIVCFYLNRY 391
F+ G+ETT +TL V D
Sbjct: 288 FIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPGASCSRVTYKD---------- 337
Query: 392 LTSSMYTRSRRSLVQTLPYLEAITYESVRVFMGRT---FSIPHRALRDTTLQGYFIPKDT 448
R+R LP L A E +R+ R ++PHR R +++ GY IP+
Sbjct: 338 -------RAR------LPLLNATIAEVLRL---RPVVPLALPHRTTRPSSIFGYDIPEGM 381
Query: 449 MIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAGP 495
++I N G +D+ W P FRP+RFL L FG G
Sbjct: 382 VVIPNLQGAHLDETVWEQPHEFRPDRFLEPGAN----PSALAFGCGA 424
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial;
mitochondrial cytochrome P450, monotopic membrane
protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus
norvegicus} PDB: 3k9y_A*
Length = 482
Score = 222 bits (567), Expect = 3e-64
Identities = 65/358 (18%), Positives = 144/358 (40%), Gaps = 20/358 (5%)
Query: 468 EVFRPERFLNDKGAIQVPDQYLPFGAGPDRLLVTDEQLWVEQRR-FVLRQLREFGFGKRT 526
++R E + I+ Y L++ + Q W R F + ++ K
Sbjct: 85 ALYRTESAHPQRLEIKPWKAYRDHRNEAYGLMILEGQEWQRVRSAFQKKLMKPVEIMK-- 142
Query: 527 MAQLVEEEAYQLVQLFKQEVQDGGAIIPMRDAFSVPVLNTLWSMLAGIRY----SPEDKE 582
+ + + E ++ + + G I + + ++ +L R+ ++E
Sbjct: 143 LDKKINEVLADFLERMDELCDERGRIPDLYSELNKWSFESICLVLYEKRFGLLQKETEEE 202
Query: 583 LKKIQSLLTELFANIDMVGALFSQFPILRYVAPEMSGYKSFVSIHQKVWKFLRNELDNHK 642
+ + + + + + + + + ++ +++ ++K ++ +DN
Sbjct: 203 ALTFITAIKTMMST--FGKMMVTPVELHKRLNTKV--WQAHTLAWDTIFKSVKPCIDNRL 258
Query: 643 ETFNPDEMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLL 702
+ ++ D + + S+ +L A ++ +A ETT+ SL + L
Sbjct: 259 QRYSQQPGADFLCDIYQQDH-------LSKKELYAAVTELQLAAVETTANSLMWILYNLS 311
Query: 703 LHPDVQKKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDT 762
+P Q++ E+ V+ ++ P D +MPYL+A ES+R+ + T
Sbjct: 312 RNPQAQRRLLQEVQSVLPDNQTPRAEDLRNMPYLKACLKESMRLT-PSVPFTTRTLDKPT 370
Query: 763 TLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAGR 820
L Y +PK T++ N + ++ + D FRPER+L + I P +LPFG G+
Sbjct: 371 VLGEYALPKGTVLTLNTQVLGSSEDNFEDSHKFRPERWLQKEKKIN-PFAHLPFGIGK 427
Score = 180 bits (459), Expect = 3e-49
Identities = 76/496 (15%), Positives = 153/496 (30%), Gaps = 118/496 (23%)
Query: 29 KPRNFPPGPDWIPILGSALAIQKLRNQTGYLYQACAELSKQYGPVVGLRVGKDRQVVCFG 88
+ PGP P+LGS L I + AE K+YG + +++G V
Sbjct: 21 RNVTDLPGPTNWPLLGSLLEIFWKGGLKK-QHDTLAEYHKKYGQIFRMKLGSFDSVHLGS 79
Query: 89 YPAIKEMLSKEE-FDGRPRGPFYETRTWGKRQGLMEGTVTAKVLSSLKRREKEDRIGESQ 147
++ + E R
Sbjct: 80 PSLLEALYRTESAHPQRL------------------------------------------ 97
Query: 148 PFRERAGIKPVTALGYKVDVLLSKAGLLVTDEQLWVEQRR-FVLRQLREFGFGKRTMAQL 206
+ D GL++ + Q W R F + ++ K + +
Sbjct: 98 ---------EIKPWKAYRDHRNEAYGLMILEGQEWQRVRSAFQKKLMKPVEIMK--LDKK 146
Query: 207 VEEEAYQLVQLFKQEVQHLSLPGAIIPMRDAFSVPVLNTLWSMLAGIRY----SPEDKEL 262
+ E ++ + G I + + ++ +L R+ ++E
Sbjct: 147 INEVLADFLERMDELCDE---RGRIPDLYSELNKWSFESICLVLYEKRFGLLQKETEEEA 203
Query: 263 KKIQSLLTELFANIDMVGALFSQFPILRYVAPEMSGYKSFVSIHQKVWKFLRNELDNHKE 322
+ + + + + + + + + ++ +++ ++K ++ +DN +
Sbjct: 204 LTFITAIKTMMST--FGKMMVTPVELHKRLNTKV--WQAHTLAWDTIFKSVKPCIDNRLQ 259
Query: 323 TFNPDEMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDM 382
++ D + + S+ +L A ++ +A ETT
Sbjct: 260 RYSQQPGADFLCDIYQQDH-------LSKKELYAAVTELQLAAVETTANS---------- 302
Query: 383 IVCFYLNRYLTSSMYTRSRRSLVQT-----------------------LPYLEAITYESV 419
L +Y SR Q +PYL+A ES+
Sbjct: 303 ---------LMWILYNLSRNPQAQRRLLQEVQSVLPDNQTPRAEDLRNMPYLKACLKESM 353
Query: 420 RVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDK 479
R+ + T L Y +PK T++ N + ++ + D FRPER+L +
Sbjct: 354 RLT-PSVPFTTRTLDKPTVLGEYALPKGTVLTLNTQVLGSSEDNFEDSHKFRPERWLQKE 412
Query: 480 GAIQVPDQYLPFGAGP 495
I P +LPFG G
Sbjct: 413 KKIN-PFAHLPFGIGK 427
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450,
cholesterol SIDE chain cleavage, structural genomics,
structural genomics consortium, SGC; HET: HEM CLR; 2.10A
{Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Length = 487
Score = 180 bits (460), Expect = 2e-49
Identities = 54/307 (17%), Positives = 112/307 (36%), Gaps = 23/307 (7%)
Query: 525 RTMAQLVEEEAYQLVQLFKQEVQ---DGGAIIPMRDAFSVPVLNTLWSMLAGIRYS---- 577
+ L++ + V + + ++ G + D ++ +++ G R
Sbjct: 125 KNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDISDDLFRFAFESITNVIFGERQGMLEE 184
Query: 578 PEDKELKKIQSLLTELFANIDMVGALFSQFPILRYVAPEMSGYKSFVS----IHQKVWKF 633
+ E ++ + ++F V L + R +K V+ I K +
Sbjct: 185 VVNPEAQRFIDAIYQMFHTS--VPMLNLPPDLFRLF--RTKTWKDHVAAWDVIFSKADIY 240
Query: 634 LRNELDNHKETFNPDEMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKS 693
+N ++ D + + L S + A +M G +TTS +
Sbjct: 241 TQNFYWELRQ--KGSVHHDYRGILYRLLGDSK----MSFEDIKANVTEMLAGGVDTTSMT 294
Query: 694 LGFGFLYLLLHPDVQKKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYESVRVFMGRTFS 753
L + + + VQ +AE+ + + +P L+A E++R+ + +
Sbjct: 295 LQWHLYEMARNLKVQDMLRAEVLAARHQAQGDMATMLQLVPLLKASIKETLRLH-PISVT 353
Query: 754 IPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQY 813
+ + D L+ Y IP T++ + + F+ DPE F P R+L+ I +
Sbjct: 354 LQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDPTRWLSKDKNIT-YFRN 412
Query: 814 LPFGAGR 820
L FG G
Sbjct: 413 LGFGWGV 419
Score = 148 bits (376), Expect = 2e-38
Identities = 69/503 (13%), Positives = 147/503 (29%), Gaps = 121/503 (24%)
Query: 27 TKKPRNFPPGPDWIPILGSALAIQKLRNQTGYLYQACAELSKQYGPVVGLRVGKDRQVVC 86
+ +P N P P L ++ ++ + ++YGP+ ++G V
Sbjct: 4 SPRPFNEIPSPGDNGWLNLYHFWRETGTHK--VHLHHVQNFQKYGPIYREKLGNVESVYV 61
Query: 87 FGYPAIKEMLSKEE--FDGRPRGPFYETRTWGKRQGLMEGTVTAKVLSSLKRREKEDRIG 144
+ + E + P+ + +R
Sbjct: 62 IDPEDVALLFKSEGPNPERFLIPPWVAYHQYYQR-------------------------- 95
Query: 145 ESQPFRERAGIKPVTALGYKVDVLLSKAGLLVTDEQLWVEQRRFVLRQLREFGFGK-RTM 203
G+L+ W + R + +++ +
Sbjct: 96 --------------------------PIGVLLKKSAAWKKDRVALNQEV--MAPEATKNF 127
Query: 204 AQLVEEEAYQLVQLFKQEVQHLSLPGAIIPMRDAFSVPVLNTLWSMLAGIRYS----PED 259
L++ + V + + ++ + D ++ +++ G R +
Sbjct: 128 LPLLDAVSRDFVSVLHRRIKKAGSGNYSGDISDDLFRFAFESITNVIFGERQGMLEEVVN 187
Query: 260 KELKKIQSLLTELFANIDMVGALFSQFPILRYVAPEMSGYKSFVS----IHQKVWKFLRN 315
E ++ + ++F V L + R +K V+ I K + +N
Sbjct: 188 PEAQRFIDAIYQMFHTS--VPMLNLPPDLFRLF--RTKTWKDHVAAWDVIFSKADIYTQN 243
Query: 316 ELDNHKETFNPDEMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTTTLPSR 375
++ D + + L S + A +M G +TT+
Sbjct: 244 FYWELRQ--KGSVHHDYRGILYRLLGDSK----MSFEDIKANVTEMLAGGVDTTSMT--- 294
Query: 376 HVNSHDMIVCFYLNRYLTSSMYTRSRRSLVQT-----------------------LPYLE 412
L +Y +R VQ +P L+
Sbjct: 295 ----------------LQWHLYEMARNLKVQDMLRAEVLAARHQAQGDMATMLQLVPLLK 338
Query: 413 AITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRP 472
A E++R+ + ++ + D L+ Y IP T++ + + F+ DPE F P
Sbjct: 339 ASIKETLRLH-PISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDP 397
Query: 473 ERFLNDKGAIQVPDQYLPFGAGP 495
R+L+ I + L FG G
Sbjct: 398 TRWLSKDKNIT-YFRNLGFGWGV 419
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase,
structural genomics, structural genomics consortium,
SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo
sapiens} PDB: 3sn5_A*
Length = 491
Score = 172 bits (438), Expect = 2e-46
Identities = 66/383 (17%), Positives = 134/383 (34%), Gaps = 50/383 (13%)
Query: 466 DPEVFRPERFLNDKGAIQVPDQYLPFGA---GPDRLLVTDEQLWVEQRRFVLRQLREFGF 522
+P + + L + A G + D ++ L+ G
Sbjct: 64 NPLSYH--KVLCHGKYFDWKKFHFATSAKAFGHRSIDPMDGNTTENINDTFIKTLQ--GH 119
Query: 523 GKRTMAQLVEEEAYQLVQ--LFKQEVQDGGAIIPMRDAFSVPVLNTLWSMLAGIRYSPED 580
++ + + E ++++ + M + + + G + D
Sbjct: 120 ALNSLTESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRVMFEAGYLTIFGRDLTRRD 179
Query: 581 KELKKIQSLLTELFANIDMVGALFSQFPILRYVAPEMSGYKSFVSIHQKVWKFLRNELDN 640
+ I + L F D V FP L P +++ + +K+ + LR+E
Sbjct: 180 TQKAHILNNLDN-FKQFDKV------FPALVAGLPI-HMFRTAHNAREKLAESLRHENLQ 231
Query: 641 HKETFNPDEMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLY 700
+E + E+ + + D TF + + + + A T + +
Sbjct: 232 KRE--SISELISLR------MFLNDTLSTFDDLEKAKTHLVVLWASQANTIPATFWSLFQ 283
Query: 701 LLLHPDVQKKAQAEIDRVV----------GRDRLPSLNDRPHMPYLEAITYESVRVFMGR 750
++ +P+ K A E+ R + G S + +P L++I ES+R+
Sbjct: 284 MIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLRLSS-- 341
Query: 751 TFSIPHRALRDTTLQ----GYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKG- 805
A D TL Y I KD +I + +D E + DP F+ +R+L++ G
Sbjct: 342 ASLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRYLDENGK 401
Query: 806 --------AIQVPDQYLPFGAGR 820
+++ Y+PFG+G
Sbjct: 402 TKTTFYCNGLKLKYYYMPFGSGA 424
Score = 138 bits (349), Expect = 8e-35
Identities = 71/498 (14%), Positives = 148/498 (29%), Gaps = 110/498 (22%)
Query: 27 TKKPRNFPPGPD-WIPILGSALAIQKLRNQTGYLYQACAELSKQYGPVVGLRVGKDRQVV 85
++ PP + IP LG AL + +L +++G V ++
Sbjct: 8 RRRQTGEPPLENGLIPYLGCALQFGANPLE--FL----RANQRKHGHVFTCKLMGKYVHF 61
Query: 86 CFGYPAIKEMLSKEEFDGRPRGPFYETRTWGKRQGLMEGTVTAKVLSSLKRREKEDRIGE 145
+ ++L + +
Sbjct: 62 ITNPLSYHKVL------------------------------------------CHGKYFD 79
Query: 146 SQPFRERAGIKPVTALGYKVDVLLSKAGLLVTDEQLWVEQRRFVLRQLREFGFGKRTMAQ 205
+ F K + D ++ L+ G ++ +
Sbjct: 80 WKKFHFATSAK-----------AFGHRSIDPMDGNTTENINDTFIKTLQ--GHALNSLTE 126
Query: 206 LVEEEAYQLVQLFKQEVQHLSLPGAIIPMRDAFSVPVLNTLWSMLAGIRYSPEDKELKKI 265
+ E ++++ + M + + + G + D + I
Sbjct: 127 SMMENLQRIMRPPVSSNSKTAAWVTEG-MYSFCYRVMFEAGYLTIFGRDLTRRDTQKAHI 185
Query: 266 QSLLTELFANIDMVGALFSQFPILRYVAPEMSGYKSFVSIHQKVWKFLRNELDNHKETFN 325
+ L F D V FP L P +++ + +K+ + LR+E +E +
Sbjct: 186 LNNLDN-FKQFDKV------FPALVAGLPI-HMFRTAHNAREKLAESLRHENLQKRE--S 235
Query: 326 PDEMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTTT--------LPSRH- 376
E+ + + D TF + + + + A T + R+
Sbjct: 236 ISELISLR------MFLNDTLSTFDDLEKAKTHLVVLWASQANTIPATFWSLFQM-IRNP 288
Query: 377 ------VNSHDMIVCFYLNRYLTSSMYTRSRRSLVQTLPYLEAITYESVRVFMGRTFSIP 430
+ + ++ + LP L++I ES+R+
Sbjct: 289 EAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLRLSS--ASLNI 346
Query: 431 HRALRDTTLQ----GYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKG------ 480
A D TL Y I KD +I + +D E + DP F+ +R+L++ G
Sbjct: 347 RTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRYLDENGKTKTTF 406
Query: 481 ---AIQVPDQYLPFGAGP 495
+++ Y+PFG+G
Sbjct: 407 YCNGLKLKYYYMPFGSGA 424
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding,
monooxygenase, NADP, oxidoreductase, protein-inhibitor
complex; HET: HEM CM6; 1.50A {Mycobacterium
tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A*
2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A*
1e9x_A* 1u13_A*
Length = 455
Score = 170 bits (434), Expect = 3e-46
Identities = 63/335 (18%), Positives = 126/335 (37%), Gaps = 31/335 (9%)
Query: 491 FGAGPDRLLVTDEQLWVEQRRFVLRQLREFGFGK---RTMAQLVEEEAYQLVQLFKQEVQ 547
FG G +V D + + A +E++ +++ + +
Sbjct: 83 FGEG----VVFDASPERRKEMLHN-----AALRGEQMKGHAATIEDQVRRMIADWGE--- 130
Query: 548 DGGAIIPMRDAFSVPVLNTLWSMLAGIRYSPEDKELKKIQSLLTELFANIDMVGALFSQF 607
I + D F+ + T + L G ++ + L EL D + +
Sbjct: 131 --AGEIDLLDFFAELTIYTSSACLIGKKFRDQLDGR--FAKLYHELERGTDPLAYVDPYL 186
Query: 608 PILRYVAPEMSGYKSFVSIHQKVWKFLRNELDNHKETFNPDEMR-DIMDVYLKTLKSEDK 666
PI ++ + + + ++ D+ D++DV + K+E
Sbjct: 187 PI--------ESFRRRDEARNGLVALVADIMNGRIANPPTDKSDRDMLDVLIAV-KAETG 237
Query: 667 TDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDRLPS 726
T FS ++ + + M AG T+S + + + L+ H D E+D + G R S
Sbjct: 238 TPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVS 297
Query: 727 LNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDK 786
+ +P LE + E++R+ + A + +QG+ I + ++ A+
Sbjct: 298 FHALRQIPQLENVLKETLRLHPP-LIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIP 356
Query: 787 EFWHDPEVFRPERFLNDKGAIQVPD-QYLPFGAGR 820
E + DP F P R+ + + ++PFGAGR
Sbjct: 357 EDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGR 391
Score = 129 bits (326), Expect = 4e-32
Identities = 63/490 (12%), Positives = 138/490 (28%), Gaps = 133/490 (27%)
Query: 34 PPGPDWIPILGSALAIQKLRNQTGYLYQACAELSKQYGPVVGLRVGKDRQVVCFGYPAIK 93
P G + G + + + G V ++ + V+ G A +
Sbjct: 7 PRVSGGHDEHGHLEEF--RTDPIGLM----QRVRDELGDVGTFQLAGKQVVLLSGSHANE 60
Query: 94 EMLSKEEFDGRPRGPFYETRTWGKRQGLMEGTVTAKVLSSLKRREKEDRIGESQPFRERA 153
+ + + ++ PF
Sbjct: 61 FF--------------------------------------FRAGDDDLDQAKAYPF---- 78
Query: 154 GIKPVTALGYKVDVLLSKAGLLVTDEQLWVEQRRFVLRQLREFGFGK---RTMAQLVEEE 210
+ P+ G +V D + + A +E++
Sbjct: 79 -MTPIFGEG------------VVFDASPERRKEMLHN-----AALRGEQMKGHAATIEDQ 120
Query: 211 AYQLVQLFKQEVQHLSLPGAIIPMRDAFSVPVLNTLWSMLAGIRYSPEDKELKKIQSLLT 270
+++ + I + D F+ + T + L G ++ + L
Sbjct: 121 VRRMIADWG--------EAGEIDLLDFFAELTIYTSSACLIGKKFRDQLDGR--FAKLYH 170
Query: 271 ELFANIDMVGALFSQFPILRYVAPEMSGYKSFVSIHQKVWKFLRNELDNHKETFNPDEMR 330
EL D + + PI ++ + + + ++ D+
Sbjct: 171 ELERGTDPLAYVDPYLPI--------ESFRRRDEARNGLVALVADIMNGRIANPPTDKSD 222
Query: 331 -DIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFYLN 389
D++DV + K+E T FS ++ + + M AG T++
Sbjct: 223 RDMLDVLIAV-KAETGTPRFSADEITGMFISMMFAGHHTSSGT----------------- 264
Query: 390 RYLTSSMYTRSRRSLVQT-----------------------LPYLEAITYESVRVFMGRT 426
+ ++ R +P LE + E++R+
Sbjct: 265 --ASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPP-L 321
Query: 427 FSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPD 486
+ A + +QG+ I + ++ A+ E + DP F P R+ + +
Sbjct: 322 IILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNR 381
Query: 487 -QYLPFGAGP 495
++PFGAG
Sbjct: 382 WTWIPFGAGR 391
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450
8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio}
PDB: 3b99_A*
Length = 475
Score = 163 bits (415), Expect = 2e-43
Identities = 48/307 (15%), Positives = 92/307 (29%), Gaps = 44/307 (14%)
Query: 537 QLVQLFKQEVQ----DGGAIIPMRDAFSVPVLNTLWSMLAGIRYS----PEDKELKKIQS 588
QL + ++ + + + N +S+L Y E+ +
Sbjct: 124 QLSNSMQNNLRLLMTPSEMGLKTSEWKKDGLFNLCYSLLFKTGYLTVFGAENNNSAALTQ 183
Query: 589 LLTELFANIDMVGALFSQFPILRYVAPEMSGYKSFVSIHQKVWKFLRNELDNHKETFNPD 648
+ E + P L K I + L L
Sbjct: 184 IYEEFRRFDKL-------LPKLARTTV----NKEEKQIASAAREKLWKWLTPSGLD-RKP 231
Query: 649 EMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQ 708
+ + Y+K L+ E + + + YLL HP+
Sbjct: 232 REQSWLGSYVKQLQDEGIDAE----MQRRAMLLQLWVTQGNAGPAAFWVMGYLLTHPEAL 287
Query: 709 KKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTL---- 764
+ + EI G L + + P +++ +E++R+ I +D +
Sbjct: 288 RAVREEIQ---GGKHLRLEERQKNTPVFDSVLWETLRLTAA--ALITRDVTQDKKICLSN 342
Query: 765 -QGYFIPKDTMIIAN-FNGVLMDKEFWHDPEVFRPERFLN---------DKGAIQVPDQY 813
Q Y + + + F MD + PE+F+ +RFLN K +V
Sbjct: 343 GQEYHLRRGDRLCVFPFISPQMDPQIHQQPEMFQFDRFLNADRTEKKDFFKNGARVKYPS 402
Query: 814 LPFGAGR 820
+P+G
Sbjct: 403 VPWGTED 409
Score = 112 bits (281), Expect = 3e-26
Identities = 43/321 (13%), Positives = 85/321 (26%), Gaps = 75/321 (23%)
Query: 213 QLVQLFKQEVQHLSLPGAI-IPMRDAFSVPVLNTLWSMLAGIRYS----PEDKELKKIQS 267
QL + ++ L P + + + + N +S+L Y E+ +
Sbjct: 124 QLSNSMQNNLRLLMTPSEMGLKTSEWKKDGLFNLCYSLLFKTGYLTVFGAENNNSAALTQ 183
Query: 268 LLTELFANIDMVGALFSQFPILRYVAPEMSGYKSFVSIHQKVWKFLRNELDNHKETFNPD 327
+ E + P L K I + L L
Sbjct: 184 IYEEFRRFDKL-------LPKLARTTV----NKEEKQIASAAREKLWKWLTPSGLD-RKP 231
Query: 328 EMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTTTLPS---------RH-- 376
+ + Y+K L+ E + P+ H
Sbjct: 232 REQSWLGSYVKQLQDEGIDAE----MQRRAMLLQLWVT--QGNAGPAAFWVMGYLLTHPE 285
Query: 377 --------VNSHDMIVCFYLNRYLTSSMYTRSRRSLVQTLPYLEAITYESVRVFMGRTFS 428
+ + + P +++ +E++R+
Sbjct: 286 ALRAVREEIQGGKHLRLE----------------ERQKNTPVFDSVLWETLRLTAA--AL 327
Query: 429 IPHRALRDTTL-----QGYFIPKDTMIIAN-FNGVLMDKEFWHDPEVFRPERFLN----- 477
I +D + Q Y + + + F MD + PE+F+ +RFLN
Sbjct: 328 ITRDVTQDKKICLSNGQEYHLRRGDRLCVFPFISPQMDPQIHQQPEMFQFDRFLNADRTE 387
Query: 478 ----DKGAIQVPDQYLPFGAG 494
K +V +P+G
Sbjct: 388 KKDFFKNGARVKYPSVPWGTE 408
Score = 46.5 bits (111), Expect = 3e-05
Identities = 17/98 (17%), Positives = 31/98 (31%), Gaps = 9/98 (9%)
Query: 15 VFVIICILAYLDTKKPRNFPPGPD-WIPILGSALAIQKLRNQTGYLYQACAELSKQYGPV 73
+ + Y + RN PP IP LG AL K + + +++G +
Sbjct: 1 MAKKTSSVLYGRRTRRRNEPPLDKGMIPWLGHALEFGKD------AAKFLTRMKEKHGDI 54
Query: 74 VGLRVGKDRQVVCFGYPAIKEMLSKEEFDGRPRGPFYE 111
+R V +LS + + +
Sbjct: 55 FTVRAAGLYITVLLDSNCYDAVLSD--VASLDQTSYAQ 90
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome
P450, endoplasmic reticulum, fatty acid biosynthesis,
heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo
sapiens} PDB: 2iag_A*
Length = 498
Score = 159 bits (405), Expect = 4e-42
Identities = 59/380 (15%), Positives = 123/380 (32%), Gaps = 45/380 (11%)
Query: 466 DPEVFRPERFLNDKGAIQVPDQYLPFGAGP--DRLLVTDEQLWVEQRRFVLRQLREFGFG 523
DP + + + + Y F D L ++ + L
Sbjct: 69 DPHSY--DAVVWEPRTRLDFHAYAIFLMERIFDVQLPHYSPSD--EKARMKLTLLHREL- 123
Query: 524 KRTMAQLVEEEAYQLVQLFKQEVQDGGAIIPMRDAFSVPVLNTLWSMLAGIRYSPEDKEL 583
+ + + + + ++ E G + + D +L + L GI P E
Sbjct: 124 -QALTEAMYTNLHAVLLGDATEAGSGWHEMGLLDFSYSFLLRAGYLTLYGIEALPRTHES 182
Query: 584 KKIQSLLTELFANIDMVGALFSQ-FPILRYVAPEMSGYKSFVSIHQKVWKFLRNELDNHK 642
+ + A++ + P L + + S+ ++WK L +
Sbjct: 183 Q---AQDRVHSADVFHTFRQLDRLLPKLARGSLSVGDKDHMCSVKSRLWKLLSPARLARR 239
Query: 643 ETFNPDEMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLL 702
++ YL L+ SE + A + + L+LL
Sbjct: 240 A-----HRSKWLESYLLHLEEMG----VSEEMQARALVLQLWATQGNMGPAAFWLLLFLL 290
Query: 703 LHPDVQKKAQAEIDRVVGRDRLPSLNDRP-------HMPYLEAITYESVRVFMGRTFSIP 755
+P+ + E++ ++ + P P L+++ ES+R+ I
Sbjct: 291 KNPEALAAVRGELESILWQAEQPVSQTTTLPQKVLDSTPVLDSVLSESLRLTAA--PFIT 348
Query: 756 HRALRDTTL-----QGYFIPKDTMI-IANFNGVLMDKEFWHDPEVFRPERFLNDKG---- 805
+ D + + + + + + + F D E + DPEVF+ RFLN G
Sbjct: 349 REVVVDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIYTDPEVFKYNRFLNPDGSEKK 408
Query: 806 -----AIQVPDQYLPFGAGR 820
++ + +P+GAG
Sbjct: 409 DFYKDGKRLKNYNMPWGAGH 428
Score = 106 bits (266), Expect = 3e-24
Identities = 49/342 (14%), Positives = 106/342 (30%), Gaps = 52/342 (15%)
Query: 184 EQRRFVLRQLREFGFGKRTMAQLVEEEAYQLVQLFKQEVQHLSLPGAIIPMRDAFSVPVL 243
+++ + R + L E L + + + + D +L
Sbjct: 109 DEKARMKL-----TLLHRELQALTEAMYTNLHAVLLGDATEAGSGWHEMGLLDFSYSFLL 163
Query: 244 NTLWSMLAGIRYSPEDKELKKIQSLLTELFANIDMVGALFSQ-FPILRYVAPEMSGYKSF 302
+ L GI P E + + A++ + P L + +
Sbjct: 164 RAGYLTLYGIEALPRTHESQ---AQDRVHSADVFHTFRQLDRLLPKLARGSLSVGDKDHM 220
Query: 303 VSIHQKVWKFLRNELDNHKETFNPDEMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMF 362
S+ ++WK L + ++ YL L+ SE +
Sbjct: 221 CSVKSRLWKLLSPARLARRA-----HRSKWLESYLLHLEEMG----VSEEMQARALVLQL 271
Query: 363 MAGSETTTTLPS-------RHVNSH-------DMIVCFYLNRYLTSSMYTRSRRSLVQTL 408
A ++ + + I+ ++ + ++ +
Sbjct: 272 WATQGNMGPAAFWLLLFLLKNPEALAAVRGELESILWQAEQPVSQTTTLPQK---VLDST 328
Query: 409 PYLEAITYESVRVFMGRTFSIPHRALRDTTL-----QGYFIPKDTMI-IANFNGVLMDKE 462
P L+++ ES+R+ I + D + + + + + + + F D E
Sbjct: 329 PVLDSVLSESLRLTAA--PFITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPE 386
Query: 463 FWHDPEVFRPERFLNDKG---------AIQVPDQYLPFGAGP 495
+ DPEVF+ RFLN G ++ + +P+GAG
Sbjct: 387 IYTDPEVFKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGH 428
Score = 51.0 bits (122), Expect = 1e-06
Identities = 18/106 (16%), Positives = 37/106 (34%), Gaps = 8/106 (7%)
Query: 14 LVFVIICILAYLDTKKPRNFPPGPDWIPILGSALAIQKLRNQTGYLYQACAELSKQYGPV 73
+ +L+ T++P P IP LG AL ++ +L + +++G +
Sbjct: 1 MAKKTSSLLSRRRTRRPGEPPLDLGSIPWLGYALDF--GKDAASFL----TRMKEKHGDI 54
Query: 74 VGLRVGKDRQVVCFGYPAIKEML--SKEEFDGRPRGPFYETRTWGK 117
+ VG V + ++ + D F R +
Sbjct: 55 FTILVGGRYVTVLLDPHSYDAVVWEPRTRLDFHAYAIFLMERIFDV 100
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1,
molecular mechanism, heme, iron, metal-binding,
monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor
A3} PDB: 3el3_A*
Length = 467
Score = 157 bits (398), Expect = 2e-41
Identities = 59/370 (15%), Positives = 122/370 (32%), Gaps = 51/370 (13%)
Query: 466 DPEVFRPERFLNDKGAIQVPDQYLPFG--AGPDRLLVTDEQLWVEQRR-----FVLRQLR 518
+PE+ + + G + + + L QRR F L +
Sbjct: 72 NPELTG--ALALNPDYHIAGPLWESLEGLLGKEGVATANGPLHRRQRRTIQPAFRLDAIP 129
Query: 519 EFGFGKRTMAQLVEEEAYQLVQLFKQEVQDGGAIIPMRDAFSVPVLNTLWSMLAGIRYSP 578
+G M + + G + + L +Y
Sbjct: 130 AYG---PIMEEEAHALTERW---------QPGKTVDATSESFRVAVRVAARCLLRGQYMD 177
Query: 579 EDKELKKIQSLLTELFANIDMVGALFSQFPILRYVAPE---MSGYKSFVSIHQKVWKFLR 635
E E L + V + ++ + + F + +
Sbjct: 178 ERAE---------RLCVALATVFRGMYRRMVVPLGPLYRLPLPANRRFNDALADLHLLVD 228
Query: 636 NELDNHKETFNPDEMRDIMDVYLKTLKSEDKT-DTFSESQLLAICMDMFMAGSETTSKSL 694
+ + + + D++ L+ ++D D E ++ + + GSET + ++
Sbjct: 229 EIIAERRA--SGQKPDDLLTALLE---AKDDNGDPIGEQEIHDQVVAILTPGSETIASTI 283
Query: 695 GFGFLYLLLHPDVQKKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYESVRV-----FMG 749
+ L HP+ + + E++ V G R + D + + + E++R+ +
Sbjct: 284 MWLLQALADHPEHADRIRDEVEAVTG-GRPVAFEDVRKLRHTGNVIVEAMRLRPAVWVLT 342
Query: 750 RTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQV 809
R RA+ ++ L GY IP II + + D + + D F P+R+L ++ A
Sbjct: 343 R------RAVAESELGGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRWLPERAANVP 396
Query: 810 PDQYLPFGAG 819
PF AG
Sbjct: 397 KYAMKPFSAG 406
Score = 120 bits (302), Expect = 8e-29
Identities = 64/502 (12%), Positives = 129/502 (25%), Gaps = 151/502 (30%)
Query: 30 PRNFPPGPDWIPILGSALAIQKLRNQTGYLYQACAELSKQYGPVVGLRVGKDRQVVCFGY 89
R P +P+LG + R+ ++ + +G VV +++G
Sbjct: 21 LREPPVAGGGVPLLGHGWRL--ARDPLAFM-----SQLRDHGDVVRIKLGPKTVYAVTNP 73
Query: 90 PAIKEMLSKEEFDGRPRGPFYETRTWGKRQGLMEGTVTAKVLSSLKRREKEDRIGESQPF 149
+ + +
Sbjct: 74 ELTGA-----------------------------------LALNPDYHIAGPLWESLEG- 97
Query: 150 RERAGIKPVTALGYKVDVLLSKAGLLVTDEQLWVEQRR-----FVLRQLREFGFGKRTMA 204
LL K G+ + L QRR F L + +G M
Sbjct: 98 ------------------LLGKEGVATANGPLHRRQRRTIQPAFRLDAIPAYG---PIME 136
Query: 205 QLVEEEAYQLVQLFKQEVQHLSLPGAIIPMRDAFSVPVLNTLWSMLAGIRYSPEDKELKK 264
+ + PG + + L +Y E E
Sbjct: 137 EEAHAL-----------TERWQ-PGKTVDATSESFRVAVRVAARCLLRGQYMDERAE--- 181
Query: 265 IQSLLTELFANIDMVGALFSQFPILRYVAPE---MSGYKSFVSIHQKVWKFLRNELDNHK 321
L + V + ++ + + F + + + +
Sbjct: 182 ------RLCVALATVFRGMYRRMVVPLGPLYRLPLPANRRFNDALADLHLLVDEIIAERR 235
Query: 322 ETFNPDEMRDIMDVYLKTLKSEDKT-DTFSESQLLAICMDMFMAGSETTTTLPSRHVNSH 380
+ + D++ L+ ++D D E ++ + + GSET +
Sbjct: 236 A--SGQKPDDLLTALLE---AKDDNGDPIGEQEIHDQVVAILTPGSETIAST-------- 282
Query: 381 DMIVCFYLNRYLTSSMYTRSRRSLVQT----------------------LPYLEAITYES 418
+ + + L + + E+
Sbjct: 283 -----------IMWLLQALADHPEHADRIRDEVEAVTGGRPVAFEDVRKLRHTGNVIVEA 331
Query: 419 VRV-----FMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPE 473
+R+ + R RA+ ++ L GY IP II + + D + + D F P+
Sbjct: 332 MRLRPAVWVLTR------RAVAESELGGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPD 385
Query: 474 RFLNDKGAIQVPDQYLPFGAGP 495
R+L ++ A PF AG
Sbjct: 386 RWLPERAANVPKYAMKPFSAGK 407
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide,
monooxygenase, metab enzyme, oxidoreductase, heme,
cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo
sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A*
Length = 456
Score = 146 bits (372), Expect = 6e-38
Identities = 72/334 (21%), Positives = 135/334 (40%), Gaps = 38/334 (11%)
Query: 498 LLVTDEQLWVEQRR-----FVLRQLREFGFGKRTMAQLVEEEAYQLVQLFKQEVQDGGAI 552
+ + + W +QRR F L + + E+A QLV++ + + DG
Sbjct: 78 VSECNYERWHKQRRVIDLAFSRSSLVS-------LMETFNEKAEQLVEILEAKA-DGQTP 129
Query: 553 IPMRDAFSVPVLNTLWSMLAGIRYSPEDKELKKIQSLLTELFANIDMVGALFSQFPILRY 612
+ M+D + ++ L G+ S L Q L++ + + G S+ + ++
Sbjct: 130 VSMQDMLTYTAMDILAKAAFGMETS----MLLGAQKPLSQAVKLM-LEGITASRNTLAKF 184
Query: 613 VAPEMSGYKSFVSIHQKVWKFLRNELDNHKETFNPDEMR--DIMDVYLKTLKSEDKTDTF 670
+ + + + + + R+ + +E E DI+ LK+E+
Sbjct: 185 LPGKRKQLREVRESIRFLRQVGRDWVQRRREALKRGEEVPADILTQ---ILKAEE--GAQ 239
Query: 671 SESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDRLPSLNDR 730
+ LL + F+AG ET++ L F + L P++ + QAE+D V+G R D
Sbjct: 240 DDEGLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLDFEDL 299
Query: 731 PHMPYLEAITYESVR-----VFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMD 785
+ YL + ES+R R +T + G +P +T ++ + +
Sbjct: 300 GRLQYLSQVLKESLRLYPPAWGTFR------LLEEETLIDGVRVPGNTPLLFSTYVMGRM 353
Query: 786 KEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAG 819
++ DP F P+RF GA + Y PF G
Sbjct: 354 DTYFEDPLTFNPDRFG--PGAPKPRFTYFPFSLG 385
Score = 90.0 bits (224), Expect = 4e-19
Identities = 77/465 (16%), Positives = 146/465 (31%), Gaps = 130/465 (27%)
Query: 65 ELSKQYGPVVGLRVGKDRQVVCFGYPAIKEMLSKEEFDGRPRGPFYET-RTWGKRQGLME 123
+ +K+YGPVV + V V+ ++K+ L ++ Y +T + +
Sbjct: 18 DWAKKYGPVVRVNVFHKTSVIVTSPESVKKFLMSTKY--NKDSKMYRALQTVFGERLFGQ 75
Query: 124 GTVTAKVLSSLKRREKEDRIGESQPFRERAGIKPVTALGYKVDVLLSKAGLLVTDEQLWV 183
G V+ + + W
Sbjct: 76 GLVS------------------------------------------------ECNYERWH 87
Query: 184 EQRR-----FVLRQLREFGFGKRTMAQLVEEEAYQLVQLFKQEVQHLSLPGAIIPMRDAF 238
+QRR F L + + E+A QLV++ + + + M+D
Sbjct: 88 KQRRVIDLAFSRSSLVS-------LMETFNEKAEQLVEILEAKAD----GQTPVSMQDML 136
Query: 239 SVPVLNTLWSMLAGIRYSPEDKELKKIQSLLTELFANIDMVGALFSQFPILRYVAPEMSG 298
+ ++ L G+ S L Q L++ + + G S+ + +++ +
Sbjct: 137 TYTAMDILAKAAFGMETS----MLLGAQKPLSQAVKLM-LEGITASRNTLAKFLPGKRKQ 191
Query: 299 YKSFVSIHQKVWKFLRNELDNHKETFNPDEMR--DIMDVYLKTLKSEDKTDTFSESQLLA 356
+ + + + R+ + +E E DI+ LK+E+ + LL
Sbjct: 192 LREVRESIRFLRQVGRDWVQRRREALKRGEEVPADILTQ---ILKAEE--GAQDDEGLLD 246
Query: 357 ICMDMFMAGSETTTTLPSRHVNSHDMIVCFYL---------------------NRYLTSS 395
+ F+AG ET+ + RYL
Sbjct: 247 NFVTFFIAGHETSANH---------LAFTVMELSRQPEIVARLQAEVDEVIGSKRYLDFE 297
Query: 396 MYTRSRRSLVQTLPYLEAITYESVR-----VFMGRTFSIPHRALRDTTLQGYFIPKDTMI 450
R L YL + ES+R R +T + G +P +T +
Sbjct: 298 DLGR--------LQYLSQVLKESLRLYPPAWGTFR------LLEEETLIDGVRVPGNTPL 343
Query: 451 IANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAGP 495
+ + + ++ DP F P+RF GA + Y PF G
Sbjct: 344 LFSTYVMGRMDTYFEDPLTFNPDRFG--PGAPKPRFTYFPFSLGH 386
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein,
alternative splicing, cholesterol biosynthesis,
endoplasmic reticulum, heme, iron; HET: HEM KLN BCD;
2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Length = 461
Score = 147 bits (372), Expect = 6e-38
Identities = 56/339 (16%), Positives = 130/339 (38%), Gaps = 44/339 (12%)
Query: 494 GPDRLLVTDEQLWVEQRRFV-----LRQLREFGFGKRTMAQLVEEEAYQLVQLFKQEVQD 548
G +++EQ++ + + ++ ++E+E + + + +
Sbjct: 92 GKGVAYDVPNPVFLEQKKMLKSGLNIAHFKQH-------VSIIEKETKEYFESWGE---- 140
Query: 549 GGAIIPMRDAFSVPVLNTLWSMLAGIRYSPE-DKELKKIQSLLTELFANIDMVGALFSQF 607
+ +A S ++ T L G + ++++ ++ + L F++ + L
Sbjct: 141 -SGEKNVFEALSELIILTASHCLHGKEIRSQLNEKVAQLYADLDGGFSHAAWL--LPGWL 197
Query: 608 PILRYVAPEMSGYKSFVSIHQKVWKFLRNELDNHKETFNPDEMRDIMDVYLKTLKSEDKT 667
P+ ++ H+++ + ++ + +++ DI+ L +D
Sbjct: 198 PL--------PSFRRRDRAHREIKDIFYKAIQKRRQ--SQEKIDDILQTLLDA-TYKDGR 246
Query: 668 DTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVG-RDRLPS 726
++ ++ + + + +AG T+S + + +L +QKK E V G +
Sbjct: 247 -PLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLPPLT 305
Query: 727 LNDRPHMPYLEAITYESVRV-----FMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNG 781
+ + L+ E++R+ M R A T+ GY IP + +
Sbjct: 306 YDQLKDLNLLDRCIKETLRLRPPIMIMMR------MARTPQTVAGYTIPPGHQVCVSPTV 359
Query: 782 VLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAGR 820
K+ W + F P+R+L D A Y+PFGAGR
Sbjct: 360 NQRLKDSWVERLDFNPDRYLQDNPASGEKFAYVPFGAGR 398
Score = 109 bits (274), Expect = 2e-25
Identities = 64/507 (12%), Positives = 145/507 (28%), Gaps = 155/507 (30%)
Query: 28 KKPRNFPPGPDWIPILGSALAIQKLRNQTGYLYQACAELSKQYGPVVGLRVGKDRQVVCF 87
++ P IP LG A+A ++ +L ++YGPV +
Sbjct: 8 AGVKSPPYIFSPIPFLGHAIAF--GKSPIEFL----ENAYEKYGPVFSFTMVGKTFTYLL 61
Query: 88 GYPAIKEMLSKEEFDGRPRGPFYE-TRTWGKRQGLMEGTVTAKVLSSLKRREKEDRIGES 146
G A + + + D + T G+
Sbjct: 62 GSDAAALLFNSKNEDLNAEDVYSRLTTPV---------------------------FGK- 93
Query: 147 QPFRERAGIKPVTALGYKVDVLLSKAGLLVTDEQLWVEQRRFV-----LRQLREFGFGKR 201
V +++EQ++ + + ++
Sbjct: 94 -------------------GVAYD------VPNPVFLEQKKMLKSGLNIAHFKQHV---S 125
Query: 202 TMAQLVEEEAYQLVQ----LFKQEVQHLSLPGAIIPMRDAFSVPVLNTLWSMLAGIRYSP 257
+ + +E + + + L + + S
Sbjct: 126 IIEKETKEYFESWGESGEKNVFEALSELII--LTA-SHCLHGKEI------------RSQ 170
Query: 258 EDKELKKIQSLLTELFANIDMVGALFSQFPILRYVAPEMSGYKSFVSIHQKVWKFLRNEL 317
++++ ++ + L F++ + L P+ ++ H+++ +
Sbjct: 171 LNEKVAQLYADLDGGFSHAAWL--LPGWLPL--------PSFRRRDRAHREIKDIFYKAI 220
Query: 318 DNHKETFNPDEMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHV 377
++ + +++ DI+ L +D ++ ++ + + + +AG T++T
Sbjct: 221 QKRRQ--SQEKIDDILQTLLDA-TYKDGR-PLTDDEVAGMLIGLLLAGQHTSSTT----- 271
Query: 378 NSHDMIVCFYLNRYLTSSMYTRSRRSLVQT------------------------LPYLEA 413
+ +R +Q L L+
Sbjct: 272 --------------SAWMGFFLARDKTLQKKCYLEQKTVCGENLPPLTYDQLKDLNLLDR 317
Query: 414 ITYESVRV-----FMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPE 468
E++R+ M R A T+ GY IP + + K+ W +
Sbjct: 318 CIKETLRLRPPIMIMMR------MARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERL 371
Query: 469 VFRPERFLNDKGAIQVPDQYLPFGAGP 495
F P+R+L D A Y+PFGAG
Sbjct: 372 DFNPDRYLQDNPASGEKFAYVPFGAGR 398
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase,
metal-binding, heme, iron; HET: HEM REA; 2.10A
{Synechocystis SP} PDB: 2ve4_A*
Length = 444
Score = 146 bits (371), Expect = 7e-38
Identities = 56/333 (16%), Positives = 118/333 (35%), Gaps = 41/333 (12%)
Query: 494 GPDRLLVTDEQLWVEQRRFVLRQLREFGFGK-RTMAQLVEEEAYQLVQLFKQEVQDGGAI 552
GP+ L ++ +R+ + + F + ++ ++ +
Sbjct: 89 GPNALATQMGEIHRSRRKILYQA---FLPRTLDSYLPKMDGIVQGYLEQWG-----KANE 140
Query: 553 IPMRDAFSVPVLNTLWSMLAGIRYSPEDKELKKIQSLLTELFANIDMVGALFSQFPILRY 612
+ + ++ G + S + ++ + LF+ PI
Sbjct: 141 VIWYPQLRRMTFDVAATLFMGEKVSQNPQLFPWFETYIQGLFS-----------LPIP-- 187
Query: 613 VAPEMSGYKSFVSIHQKVWKFLRNELDNHKETFNPDEMRDIMDVYLKTLKSEDKTDTFSE 672
P + + + L + ++ P D + + L ++ S
Sbjct: 188 -LP-NTLFGKSQRARALLLAELEKIIKARQQ--QPPSEEDALGILLAARDDNNQP--LSL 241
Query: 673 SQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDRLPSLNDRPH 732
+L + + AG ET + +L L L H D++++ + E +++ + +
Sbjct: 242 PELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNKLQL-SQELTAETLKK 300
Query: 733 MPYLEAITYESVRV-----FMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKE 787
MPYL+ + E +R+ R ++D QG+ PK ++ + D +
Sbjct: 301 MPYLDQVLQEVLRLIPPVGGGFR------ELIQDCQFQGFHFPKGWLVSYQISQTHADPD 354
Query: 788 FWHDPEVFRPERFLNDKGAIQV-PDQYLPFGAG 819
+ DPE F PERF D A P ++PFG G
Sbjct: 355 LYPDPEKFDPERFTPDGSATHNPPFAHVPFGGG 387
Score = 115 bits (291), Expect = 1e-27
Identities = 72/495 (14%), Positives = 148/495 (29%), Gaps = 127/495 (25%)
Query: 21 ILAYLDTKKPRNFPPGPDWIPILGSALAIQKLRNQTGYLYQACAELSKQYGPVVGLRVGK 80
++ PPG +P LG L N + + +Q+GP+ R+
Sbjct: 1 MITSPTNLNSLPIPPGDFGLPWLGETLN---FLNDGDFG----KKRQQQFGPIFKTRLFG 53
Query: 81 DRQVVCFGYPAIKEMLSKEEFDGRPRGPFYETRTWGKRQGLMEGTVTAKVLSSLKRREKE 140
+ G A + + + ++
Sbjct: 54 KNVIFISGALANRFL--------------------------------------FTKEQET 75
Query: 141 DRIGESQPFRERAGIKPVTALGYKVDVLLSKAGLLVTDEQLWVEQRRFVLRQLREFGFGK 200
+ R LL L ++ +R+ + + F
Sbjct: 76 FQATWPLSTRI----------------LLGPNALATQMGEIHRSRRKILYQ-----AFLP 114
Query: 201 RTMAQLVEEEAYQLVQLFKQEVQHLSLPGAIIPMRDAFSVPVLNTLWSMLAGIRYSPEDK 260
RT+ + + + + + ++ + + ++ G + S +
Sbjct: 115 RTLDSYLPK----MDGIVQGYLEQWG-KANEVIWYPQLRRMTFDVAATLFMGEKVSQNPQ 169
Query: 261 ELKKIQSLLTELFANIDMVGALFSQFPILRYVAPEMSGYKSFVSIHQKVWKFLRNELDNH 320
++ + LF+ PI P + + + L +
Sbjct: 170 LFPWFETYIQGLFS-----------LPIP---LP-NTLFGKSQRARALLLAELEKIIKAR 214
Query: 321 KETFNPDEMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTTT-------LP 373
++ P D + + L ++ S +L + + AG ET T+ L
Sbjct: 215 QQ--QPPSEEDALGILLAARDDNNQP--LSLPELKDQILLLLFAGHETLTSALSSFCLLL 270
Query: 374 SRH-------VNSHDMIVCFYLNRYLTSSMYTRSRRSLVQTLPYLEAITYESVRV----- 421
+H + + L++ LT+ + +PYL+ + E +R+
Sbjct: 271 GQHSDIRERVRQEQNKLQ---LSQELTAETLKK--------MPYLDQVLQEVLRLIPPVG 319
Query: 422 FMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGA 481
R ++D QG+ PK ++ + D + + DPE F PERF D A
Sbjct: 320 GGFR------ELIQDCQFQGFHFPKGWLVSYQISQTHADPDLYPDPEKFDPERFTPDGSA 373
Query: 482 IQV-PDQYLPFGAGP 495
P ++PFG G
Sbjct: 374 THNPPFAHVPFGGGL 388
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo
sapiens} PDB: 3eqm_A* 3s7s_A*
Length = 503
Score = 146 bits (371), Expect = 1e-37
Identities = 61/329 (18%), Positives = 121/329 (36%), Gaps = 33/329 (10%)
Query: 498 LLVTDEQLWVEQRRFVLRQLREFGFGK-RTMAQLVEEEAYQLVQLFKQEVQDGGAIIPMR 556
+ + +LW R F ++ M + E + ++ + + +
Sbjct: 133 IFNNNPELWKTTRPFFMK---ALSGPGLVRMVTVCAESLKTHLDRLEEVT-NESGYVDVL 188
Query: 557 DAFSVPVLNTLWSMLAGIRYSPEDKELKKIQSLLTELFANIDMVGALFSQFPILRYVAPE 616
+L+T ++ I +++ ++ D AL + I ++
Sbjct: 189 TLLRRVMLDTSNTLFLRIPLDE--------SAIVVKIQGYFDAWQALLIKPDIFFKISWL 240
Query: 617 MSGYKSFVSIHQKVWKFLRNELDNHKETFNPDEMRDIMDVYLKTLKSEDKTDTFSESQLL 676
YK + + + + + + + +E + + L +K + +
Sbjct: 241 ---YKKYEKSVKDLKDAIEVLIAEKRRRISTEEKLEECMDFATELILAEKRGDLTRENVN 297
Query: 677 AICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDRLPSLNDRPHMPYL 736
++M +A +T S SL F + HP+V++ EI V+G +R ++D + +
Sbjct: 298 QCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIG-ERDIKIDDIQKLKVM 356
Query: 737 EAITYESVRV-----FMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHD 791
E YES+R + R +AL D + GY + K T II N G + EF+
Sbjct: 357 ENFIYESMRYQPVVDLVMR------KALEDDVIDGYPVKKGTNIILNI-GRMHRLEFFPK 409
Query: 792 PEVFRPERFLNDKGAIQVPDQYLPFGAGR 820
P F E F + + PFG G
Sbjct: 410 PNEFTLENFAKNVP----YRYFQPFGFGP 434
Score = 124 bits (313), Expect = 4e-30
Identities = 67/520 (12%), Positives = 154/520 (29%), Gaps = 126/520 (24%)
Query: 2 ALLLSVMWFEIFLVFVIICILAYLDTKKPRNFPPGPDWIPILGSALAIQKLRNQTGYLYQ 61
+++ M V ++ + + + + PGP + +G ++ + +
Sbjct: 15 SIVPEAMPAATMPVLLLTGLFLLVWNYEGTSSIPGPGYCMGIGPLISHGRFLWMG--IGS 72
Query: 62 ACAELSKQYGPVVGLRVGKDRQVVCFGYPAIKEMLSKEEFDGRPRGPFYETRTWGKRQGL 121
AC ++ YG + + + + ++ ++ ++ +
Sbjct: 73 ACNYYNRVYGEFMRVWISGEETLIISKSSSMFHIMKHNHY-------------------- 112
Query: 122 MEGTVTAKVLSSLKRREKEDRIGESQPFRERAGIKPVTALGYKVDVLLSKAGLLVTDEQL 181
S F + G++ + K + + +L
Sbjct: 113 ------------------------SSRFGSKLGLQCIGMHE--------KGIIFNNNPEL 140
Query: 182 WVEQRRFVLRQLREFGFGK-RTMAQLVEEEAYQLVQLFKQEVQHLSLPGAIIPMRDAFSV 240
W R F ++ M + E + ++ + +
Sbjct: 141 WKTTRPFFMK---ALSGPGLVRMVTVCAESLKTHLDRLEEVTN----ESGYVDVLTLLRR 193
Query: 241 PVLNTLWSMLAGIRYSPEDKELKKIQSLLTELFANIDMVGALFSQFPILRYVAPEMSGYK 300
+L+T ++ I +++ ++ D AL + I ++ YK
Sbjct: 194 VMLDTSNTLFLRIPLDE--------SAIVVKIQGYFDAWQALLIKPDIFFKISWL---YK 242
Query: 301 SFVSIHQKVWKFLRNELDNHKETFNPDEMRDIMDVYLKTLKSEDKTDTFSESQLLAICMD 360
+ + + + + + + +E + + L +K + + ++
Sbjct: 243 KYEKSVKDLKDAIEVLIAEKRRRISTEEKLEECMDFATELILAEKRGDLTRENVNQCILE 302
Query: 361 MFMAGSETTTTLPSRHVNSHDMIVCFYL--------------------NRYLTSSMYTRS 400
M +A +T + + +L R +
Sbjct: 303 MLIAAPDTMSVS---------LFFMLFLIAKHPNVEEAIIKEIQTVIGERDIKIDD---- 349
Query: 401 RRSLVQTLPYLEAITYESVRVF-----MGRTFSIPHRALRDTTLQGYFIPKDTMIIANFN 455
+Q L +E YES+R + R +AL D + GY + K T II N
Sbjct: 350 ----IQKLKVMENFIYESMRYQPVVDLVMR------KALEDDVIDGYPVKKGTNIILNI- 398
Query: 456 GVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAGP 495
G + EF+ P F E F + + PFG GP
Sbjct: 399 GRMHRLEFFPKPNEFTLENFAKNVP----YRYFQPFGFGP 434
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme,
oxidoreductase, monooxygenase, sterol biosynthesis,
lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A
{Trypanosoma brucei} PDB: 3g1q_A* 3p99_A* 2wv2_A*
2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Length = 450
Score = 144 bits (366), Expect = 3e-37
Identities = 57/338 (16%), Positives = 113/338 (33%), Gaps = 40/338 (11%)
Query: 494 GPDRLLVTDEQLWVEQRRFVLRQLREFGFGKRTMAQLVEEEAYQLVQLFKQEVQDGGAII 553
G EQ F+ V +++ + I
Sbjct: 84 GEGVAYAAPYPRMREQLNFLA-----EELTIAKFQNFVPAIQHEVRKFMAANWDKDEGEI 138
Query: 554 PMRDAFSVPVLNTLWSMLAG--IRYSPEDKELKKIQSLLTELFANIDMVGALFSQFPILR 611
+ + S ++NT L G +R + + ++ + + + + + P+
Sbjct: 139 NLLEDCSTMIINTACQCLFGEDLRKRLDARRFAQLLAKMESSLIPAAVFLPILLKLPL-- 196
Query: 612 YVAPEMSGYKSFVSIHQKVWKFLRNELDNHKETFNPDE--MRDIMDVYLKTLKSEDKTDT 669
++ K L + KE + D++ L D T
Sbjct: 197 ------PQSARCHEARTELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSA-VYRDGT-P 248
Query: 670 FSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQK--KAQAEIDRVVGRDRLPSL 727
S ++ + + AG T+S + + L+L+ +V+ + EI+ + L
Sbjct: 249 MSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQ--LNYN 306
Query: 728 NDRPHMPYLEAITYESVRV-----FMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGV 782
N MP+ E ES+R + R + + D + Y +PK +I +
Sbjct: 307 NVMDEMPFAERCARESIRRDPPLLMLMR------KVMADVKVGSYVVPKGDIIACSPLLS 360
Query: 783 LMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAGR 820
D+E + +P + PER +GA ++ FGAG
Sbjct: 361 HHDEEAFPEPRRWDPERDEKVEGA------FIGFGAGV 392
Score = 111 bits (281), Expect = 3e-26
Identities = 65/488 (13%), Positives = 138/488 (28%), Gaps = 127/488 (26%)
Query: 34 PPGPDWIPILGSALAIQKLRNQTGYLYQACAELSKQYGPVVGLRVGKDRQVVCFGYPAIK 93
P P +PILG + ++ G++ Q C + + + + R +
Sbjct: 6 PVYPVTVPILGHIIQF--GKSPLGFM-QECKR--QLKSGIFTINIVGKRVTIVGDPHEHS 60
Query: 94 EMLSKEEFDGRPRGPFYETRTWGKRQGLMEGTVTAKVLSSLKRREKEDRIGESQPFRERA 153
R + E F
Sbjct: 61 RFFL--------------------------------------PRNEVLSPREVYSF---- 78
Query: 154 GIKPVTALGYKVDVLLSKAGLLVTDEQLWVEQRRFV-----LRQLREFGFGKRTMAQLVE 208
+ PV + EQ F+ + + + F ++
Sbjct: 79 -MVPV----------FGEGVAYAAPYPRMREQLNFLAEELTIAKFQNF-------VPAIQ 120
Query: 209 EEAYQLVQLFKQEVQHLSLPGAIIPMRDAFSVPVLNTLWSMLAG--IRYSPEDKELKKIQ 266
E + + + I + + S ++NT L G +R + + ++
Sbjct: 121 HEVRKFMA------ANWDKDEGEINLLEDCSTMIINTACQCLFGEDLRKRLDARRFAQLL 174
Query: 267 SLLTELFANIDMVGALFSQFPILRYVAPEMSGYKSFVSIHQKVWKFLRNELDNHKETFNP 326
+ + + + + P+ ++ K L + KE
Sbjct: 175 AKMESSLIPAAVFLPILLKLPL--------PQSARCHEARTELQKILSEIIIARKEEEVN 226
Query: 327 DE--MRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIV 384
+ D++ L D T S ++ + + AG T++ +
Sbjct: 227 KDSSTSDLLSGLLSA-VYRDGT-PMSLHEVCGMIVAAMFAGQHTSSITTT--------WS 276
Query: 385 CFYLNRYLTSSMYTRSRR------------SLVQTLPYLEAITYESVRV-----FMGRTF 427
+L R+ +++ +P+ E ES+R + R
Sbjct: 277 MLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDEMPFAERCARESIRRDPPLLMLMR-- 334
Query: 428 SIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQ 487
+ + D + Y +PK +I + D+E + +P + PER +GA
Sbjct: 335 ----KVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPERDEKVEGA------ 384
Query: 488 YLPFGAGP 495
++ FGAG
Sbjct: 385 FIGFGAGV 392
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic
resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus
megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A*
1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A*
2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A*
2ij3_A* 2ij4_A* 3hf2_A* ...
Length = 470
Score = 144 bits (366), Expect = 5e-37
Identities = 70/332 (21%), Positives = 124/332 (37%), Gaps = 39/332 (11%)
Query: 501 TDEQLWVEQRRFVLRQLREFGFGK-RTMAQLVEEEAYQLVQLFKQEVQDGGAIIPMRDAF 559
T E+ W + +L F + ++ + A QLVQ K E + I + +
Sbjct: 91 THEKNWKKAHN-ILLPS--FSQQAMKGYHAMMVDIAVQLVQ--KWERLNADEHIEVPEDM 145
Query: 560 SVPVLNTLWSMLAGIRYSPEDKE-----LKKIQSLLTELFANIDMVGALFSQFPILRYVA 614
+ L+T+ R++ ++ + + L E + Q A
Sbjct: 146 TRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKL--------QRANPDDPA 197
Query: 615 PEMSGYKSFVSIHQKVWKFLRNELDNHKETFNPDEMRDIMDVYLKTLKSEDKTDTFSESQ 674
+ + + F + + + + + K + ++ D++ L E + +
Sbjct: 198 YDENKRQ-FQEDIKVMNDLVDKIIADRKA--SGEQSDDLLTHMLNGKDPETG-EPLDDEN 253
Query: 675 LLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDRLPSLNDRPHMP 734
+ + +AG ETTS L F +L+ +P V +KA E RV+ D +PS +
Sbjct: 254 IRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLV-DPVPSYKQVKQLK 312
Query: 735 YLEAITYESVR-----VFMGRTFSIPHRALRDTTLQG-YFIPKDTMIIANFNGVLMDKEF 788
Y+ + E++R A DT L G Y + K ++ + DK
Sbjct: 313 YVGMVLNEALRLWPTAPAFSL------YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTI 366
Query: 789 WH-DPEVFRPERFLNDKGAIQVPDQYLPFGAG 819
W D E FRPERF N + PFG G
Sbjct: 367 WGDDVEEFRPERFENPSA--IPQHAFKPFGNG 396
Score = 99.6 bits (249), Expect = 3e-22
Identities = 72/501 (14%), Positives = 133/501 (26%), Gaps = 149/501 (29%)
Query: 35 PGPDWIPILGSALAIQKLRNQTGYLYQACAELSKQYGPVVGLRVGKDRQVVCFGYPAIKE 94
P P L + + QA +++ + G + IKE
Sbjct: 6 PQPKTFGELKNLPLLNT-----DKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKE 60
Query: 95 MLSKEEFDGRPRGPFYETRTWGKRQGLMEGTVTAKVLSSLKRREKEDRIGESQPFRERAG 154
+ FD R + +G T+
Sbjct: 61 ACDESRFDKNLSQALKFVRDF-----AGDGLFTSW------------------------- 90
Query: 155 IKPVTALGYKVDVLLSKAGLLVTDEQLWVEQRRFVLRQLREFGFGK-RTMAQLVEEEAYQ 213
T E+ W + +L F + ++ + A Q
Sbjct: 91 ----------------------THEKNWKKAHN-ILLPS--FSQQAMKGYHAMMVDIAVQ 125
Query: 214 LVQLFK-----------QEVQHLSLPGAIIPMRDAFSVPVLNTLWSMLAGIRYSPEDKE- 261
LVQ ++ +++ L+L I F+ Y +
Sbjct: 126 LVQKWERLNADEHIEVPEDMTRLTL--DTI-GLCGFNYRF---------NSFYRDQPHPF 173
Query: 262 LKKIQSLLTELFANIDMVGALFSQFPILRYVAPEMSGYKSFVSIHQKVWKFLRNELDNHK 321
+ + L E + Q A + + + F + + + + + K
Sbjct: 174 ITSMVRALDEAMNKL--------QRANPDDPAYDENKRQ-FQEDIKVMNDLVDKIIADRK 224
Query: 322 ETFNPDEMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHD 381
+ ++ D++ L E + + + + +AG ETT+ L
Sbjct: 225 A--SGEQSDDLLTHMLNGKDPETG-EPLDDENIRYQIITFLIAGHETTSGL--------- 272
Query: 382 MIVCFYL--------------------NRYLTSSMYTRSRRSLVQTLPYLEAITYESVR- 420
+ Y + + + L Y+ + E++R
Sbjct: 273 LSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQ--------LKYVGMVLNEALRL 324
Query: 421 ----VFMGRTFSIPHRALRDTTLQG-YFIPKDTMIIANFNGVLMDKEFWH-DPEVFRPER 474
A DT L G Y + K ++ + DK W D E FRPER
Sbjct: 325 WPTAPAFSL------YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPER 378
Query: 475 FLNDKGAIQVPDQYLPFGAGP 495
F N + PFG G
Sbjct: 379 FENPSA--IPQHAFKPFGNGQ 397
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid
complex, riken structural genomics/proteomics
initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus
subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Length = 417
Score = 133 bits (337), Expect = 9e-34
Identities = 45/359 (12%), Positives = 99/359 (27%), Gaps = 65/359 (18%)
Query: 468 EVFRPERFLNDKGAIQVPDQYLPFGAGPDRLLVTDEQLWVEQRRFVLRQLREFGFGKR-- 525
+ +RF P + G + + D + ++ L +
Sbjct: 57 VFYDTDRFQRQNAL---PKRVQKSLFGVNAIQGMDGSAHIHRKMLFLSLMT----PPHQK 109
Query: 526 TMAQLVEEEAYQLVQLFKQEVQDGGAIIPMRDAFSVPVLNTLWSMLAGIRYSPEDKELKK 585
+A+L+ EE V ++ + + + + ++ E+K+
Sbjct: 110 RLAELMTEEWKAAVTRWE-----KADEVVLFEEAKEILCRVACYWAGV---PLKETEVKE 161
Query: 586 IQSLLTELFANIDMVGALFSQFPILRYVAPEMSGYKSFVSIHQKVWKFLRNELDNHKETF 645
++ VG + R + +++ +++ +
Sbjct: 162 RADDFIDMVDAFGAVGPRHWKGRRAR----------------PRAEEWIEVMIEDARAGL 205
Query: 646 NPDEMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHP 705
+ + + +S++ AI + + S L F L L HP
Sbjct: 206 LKTTSGTALHEMAF---HTQEDGSQLDSRMAAIELINVLRPIVAISYFLVFSALALHEHP 262
Query: 706 DVQKKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYESVR----VFMGRTFSIPHRALRD 761
++ ++ + E E R + +D
Sbjct: 263 KYKEWLRSG-----------------NSREREMFVQEVRRYYPFGPF-----LGALVKKD 300
Query: 762 TTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAGR 820
K T ++ + G D W P+ FRPERF + +P G G
Sbjct: 301 FVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFRPERFAEREEN---LFDMIPQGGGH 356
Score = 113 bits (285), Expect = 5e-27
Identities = 49/476 (10%), Positives = 110/476 (23%), Gaps = 136/476 (28%)
Query: 35 PGPDWIPILGSALAIQKLRNQTGYLYQACAELSKQYGP-VVGLRVGKDRQVVCFGYPAIK 93
P L ++L + L+ ++ +++Y + R+ + G A K
Sbjct: 6 PHD---KSLDNSLTL--LKEGYLFI----KNRTERYNSDLFQARLLGKNFICMTGAEAAK 56
Query: 94 EMLSKEEFDGRPRGPFYETRTWGKRQGLMEGTVTAKVLSSLKRREKEDRIGESQPFRERA 153
+ F + P ++
Sbjct: 57 VFYDTDRFQRQNALPKRVQKS--------------------------------------- 77
Query: 154 GIKPVTALGYKVDVLLSKAGLLVTDEQLWVEQRRFVLRQLREFGFGKR--TMAQLVEEEA 211
L + D + ++ L + +A+L+ EE
Sbjct: 78 --------------LFGVNAIQGMDGSAHIHRKMLFLSLMT----PPHQKRLAELMTEEW 119
Query: 212 YQLVQLFKQEVQHLSLPGAIIPMRDAFSVPVLNTLWSMLAGIRYSPEDKELKKIQSLLTE 271
K V + + + + ++ E+K+ +
Sbjct: 120 -------KAAVTRWE-KADEVVLFEEAKEILCRVACYWAGV---PLKETEVKERADDFID 168
Query: 272 LFANIDMVGALFSQFPILRYVAPEMSGYKSFVSIHQKVWKFLRNELDNHKETFNPDEMRD 331
+ VG + R + +++ +++ +
Sbjct: 169 MVDAFGAVGPRHWKGRRAR----------------PRAEEWIEVMIEDARAGLLKTTSGT 212
Query: 332 IMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFYLNRY 391
+ + + +S++ AI + + + +
Sbjct: 213 ALHEMAF---HTQEDGSQLDSRMAAIELINVLRPIVAISY-------------------F 250
Query: 392 LTSSMYTRSR------RSLVQTLPYLEAITYESVR----VFMGRTFSIPHRALRDTTLQG 441
L S E E R + +D
Sbjct: 251 LVFSALALHEHPKYKEWLRSGNSREREMFVQEVRRYYPFGPF-----LGALVKKDFVWNN 305
Query: 442 YFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAGPDR 497
K T ++ + G D W P+ FRPERF + +P G G
Sbjct: 306 CEFKKGTSVLLDLYGTNHDPRLWDHPDEFRPERFAEREEN---LFDMIPQGGGHAE 358
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold,
hemoprotein, monoo cytochrome P450 reductase,
endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo
sapiens} PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A*
1tqn_A* 3ua1_A* 3tjs_A*
Length = 485
Score = 133 bits (336), Expect = 4e-33
Identities = 81/324 (25%), Positives = 140/324 (43%), Gaps = 52/324 (16%)
Query: 523 GK-RTMAQLVEEEAYQLVQLFKQEVQDGGAIIPMRD-------------AFSVPVLNTLW 568
GK + M ++ + LV+ ++E + G + ++D +F V + ++L
Sbjct: 118 GKLKEMVPIIAQYGDVLVRNLRREAETGK-PVTLKDVFGAYSMDVITSTSFGVNI-DSL- 174
Query: 569 SMLAGIRYSPEDKELKKIQSLLTELFANIDMVGALFSQFPILRYVAPEMSGYKSFVSIHQ 628
+P+D ++ + LL F +D + FP L + E+ F +
Sbjct: 175 -------NNPQDPFVENTKKLLR--FDFLDPFFLSITVFPFLIPIL-EVLNICVF---PR 221
Query: 629 KVWKFLRNELDN-------HKETFNPDEMRDIMDVYLKTLKSEDKTDTFSESQLLAICMD 681
+V FLR + + D ++ ++D + K + S+ +L+A +
Sbjct: 222 EVTNFLRKSVKRMKESRLEDTQKHRVDFLQLMID--SQNSKETESHKALSDLELVAQSII 279
Query: 682 MFMAGSETTSKSLGFGFLYLL-LHPDVQKKAQAEIDRVVGRDRLPSLNDRPHMPYLEAIT 740
AG ETTS L F +Y L HPDVQ+K Q EID V+ P+ + M YL+ +
Sbjct: 280 FIFAGYETTSSVLSFI-MYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVV 338
Query: 741 YESVR-----VFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVF 795
E++R + + R +D + G FIPK +++ + D ++W +PE F
Sbjct: 339 NETLRLFPIAMRLER------VCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKF 392
Query: 796 RPERFLNDKGAIQVPDQYLPFGAG 819
PERF P Y PFG+G
Sbjct: 393 LPERFSKKNKDNIDPYIYTPFGSG 416
Score = 88.4 bits (220), Expect = 2e-18
Identities = 68/344 (19%), Positives = 127/344 (36%), Gaps = 91/344 (26%)
Query: 199 GK-RTMAQLVEEEAYQLVQLFKQEVQHLSLPGAIIPMRD-------------AFSVPVLN 244
GK + M ++ + LV+ ++E + G + ++D +F V + +
Sbjct: 118 GKLKEMVPIIAQYGDVLVRNLRREAET----GKPVTLKDVFGAYSMDVITSTSFGVNI-D 172
Query: 245 TLWSMLAGIRYSPEDKELKKIQSLLTELFANIDMVGALFSQFPILRYVAPEMSGYKSFVS 304
+L +P+D ++ + LL F +D + FP L + E+ F
Sbjct: 173 SL--------NNPQDPFVENTKKLLR--FDFLDPFFLSITVFPFLIPIL-EVLNICVF-- 219
Query: 305 IHQKVWKFLRNELDN-------HKETFNPDEMRDIMDVYLKTLKSEDKTDTFSESQLLAI 357
++V FLR + + D ++ ++D + K + S+ +L+A
Sbjct: 220 -PREVTNFLRKSVKRMKESRLEDTQKHRVDFLQLMID--SQNSKETESHKALSDLELVAQ 276
Query: 358 CMDMFMAGSETTTTLPSRHVNSHDMIVCFYL---------------------NRYLTSSM 396
+ AG ETT+++ + Y T
Sbjct: 277 SIIFIFAGYETTSSV---------LSFIMYELATHPDVQQKLQEEIDAVLPNKAPPT--- 324
Query: 397 YTRSRRSLVQTLPYLEAITYESVR-----VFMGRTFSIPHRALRDTTLQGYFIPKDTMII 451
Y V + YL+ + E++R + + R +D + G FIPK +++
Sbjct: 325 Y-----DTVLQMEYLDMVVNETLRLFPIAMRLER------VCKKDVEINGMFIPKGVVVM 373
Query: 452 ANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAGP 495
+ D ++W +PE F PERF P Y PFG+GP
Sbjct: 374 IPSYALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPFGSGP 417
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase,
oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas
paucimobilis} PDB: 3awq_A* 3awp_A*
Length = 415
Score = 121 bits (305), Expect = 1e-29
Identities = 51/360 (14%), Positives = 98/360 (27%), Gaps = 68/360 (18%)
Query: 468 EVFRPERFLNDKGAIQVPDQYLPFGAGPDRLLVTDEQLWVEQRRFVLRQLREFGFGKR-- 525
+ RF + P G + D + +++ + + +R
Sbjct: 56 IFYDTTRFEREGAM---PVAIQKTLLGQGGVQGLDGETHRHRKQMFMGLMT----PERVR 108
Query: 526 TMAQLVEEEAYQLVQLFKQEVQDGGAIIPMRDAFSVPVLNTLWSMLAGIRYSPEDKELKK 585
+AQL E E + V + I D P+ + + E
Sbjct: 109 ALAQLFEAEWRRAVPGWT-----RKGEIVFYDELHEPLTRAVCAWAGVPLPDDE------ 157
Query: 586 IQSLLTELFANIDMVGALFSQFPILRYVAPEMSGYKSFVSIHQKVWKFLRNELDNHKETF 645
+ EL A + A S P + ++V + + ++ +
Sbjct: 158 AGNRAGELRA---LFDAAGSASPRHLW----------SRLARRRVDAWAKRIIEGIRAGS 204
Query: 646 NPDEMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHP 705
D+ D + A+ + + + + + F L
Sbjct: 205 IGSGSGTAAYA---IAWHRDRHDDLLSPHVAAVELVNVLRPTVAIAVYITFVAHALQTCS 261
Query: 706 DVQKKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYESVRV-----FMGRTFSIPHRALR 760
++ + Y E E R + RA +
Sbjct: 262 GIRAALVQQ------------------PDYAELFVQEVRRFYPFFPAVVA------RASQ 297
Query: 761 DTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAGR 820
D +G P+ ++ + G D W DP+ FRPERF ++P G G
Sbjct: 298 DFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERFRAWDED---SFNFIPQGGGD 354
Score = 109 bits (275), Expect = 9e-26
Identities = 58/468 (12%), Positives = 117/468 (25%), Gaps = 121/468 (25%)
Query: 34 PPGPDWIPILGSALAIQKLRNQTGYLYQACAELSKQYGP-VVGLRVGKDRQVVCFGYPAI 92
P P L++ L + ++ + ++ G R + G A
Sbjct: 2 PKTPH-TKGPDETLSL--LADPYRFI----SRQCQRLGANAFESRFLLKKTNCLKGAKAA 54
Query: 93 KEMLSKEEFDGRPRGPFYETRTWGKRQGLMEGTVTAKVLSSLKRREKEDRIGESQPFRER 152
+ F+ P +T
Sbjct: 55 EIFYDTTRFEREGAMPVAIQKTL------------------------------------- 77
Query: 153 AGIKPVTALGYKVDVLLSKAGLLVTDEQLWVEQRRFVLRQLREFGFGKRTMAQLVEEEAY 212
L + G+ D + +++ + + L +
Sbjct: 78 ----------------LGQGGVQGLDGETHRHRKQMFMG-----LMTPERVRALAQ---- 112
Query: 213 QLVQLFKQEVQHLSLPGAIIPMRDAFSVPVLNTLWSMLAGIRYSPEDKELKKIQSLLTEL 272
+++ V + I D P+ + + E + EL
Sbjct: 113 LFEAEWRRAVPGWT-RKGEIVFYDELHEPLTRAVCAWAGVPLPDDE------AGNRAGEL 165
Query: 273 FANIDMVGALFSQFPILRYVAPEMSGYKSFVSIHQKVWKFLRNELDNHKETFNPDEMRDI 332
A + A S P + ++V + + ++ +
Sbjct: 166 RA---LFDAAGSASPRHLW----------SRLARRRVDAWAKRIIEGIRAGSIGSGSGTA 212
Query: 333 MDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFYLNRYL 392
D+ D + A+ + + + ++ L
Sbjct: 213 AYA---IAWHRDRHDDLLSPHVAAVELVNVLRPTVAIAV------------YITFVAHAL 257
Query: 393 TSSMYTRSRRSLVQTLPYLEAITYESVRV-----FMGRTFSIPHRALRDTTLQGYFIPKD 447
+ + R +LVQ Y E E R + RA +D +G P+
Sbjct: 258 QT--CSGIRAALVQQPDYAELFVQEVRRFYPFFPAVVA------RASQDFEWEGMAFPEG 309
Query: 448 TMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAGP 495
++ + G D W DP+ FRPERF ++P G G
Sbjct: 310 RQVVLDLYGSNHDAATWADPQEFRPERFRAWDED---SFNFIPQGGGD 354
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus
thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Length = 389
Score = 109 bits (275), Expect = 8e-26
Identities = 66/373 (17%), Positives = 106/373 (28%), Gaps = 105/373 (28%)
Query: 457 VLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAGPDRLLVTDEQLWVEQRR----- 511
L+ + +R L G G LL + W E R+
Sbjct: 55 ALLAEGTTKATFQYRALSRL--------------TGRG---LLTDWGESWKEARKALKDP 97
Query: 512 FVLRQLREFGFGKRTMAQLVEEEAYQLVQLFKQEVQDGGAIIPMRDAFSVPVLNTLWSML 571
F+ + +R + M + + G + L L L
Sbjct: 98 FLPKNVRGYR---EAMEEEARAFFGEW----------RGEERDLDHEMLALSLRLLGRAL 144
Query: 572 AGIRYSPEDKELKKIQSLLTELFANIDMVGALFSQFPILRYVAPEMSGYKSFVSIHQKVW 631
G SP E L + A AL R+ +K
Sbjct: 145 FGKPLSPSLAEH--ALKALDRIMAQTRSPLALLDLAAEARF---------------RKDR 187
Query: 632 KFLRNELDNHKETFNPDEMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTS 691
L E + L + L+ + + +AG ET +
Sbjct: 188 GALYREAE--------------------ALIVHPPLSHLPRERALSEAVTLLVAGHETVA 227
Query: 692 KSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYESVR-----V 746
+L + FL L PD QK+ + + E++R
Sbjct: 228 SALTWSFLLLSHRPDWQKRVAESEEAALA------------------AFQEALRLYPPAW 269
Query: 747 FMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGA 806
+ R R R L +P T ++ + + + + D E FRPERFL ++G
Sbjct: 270 ILTR------RLERPLLLGEDRLPPGTTLVLSP--YVTQRLHFPDGEAFRPERFLEERGT 321
Query: 807 IQVPDQYLPFGAG 819
+Y PFG G
Sbjct: 322 --PSGRYFPFGLG 332
Score = 83.0 bits (206), Expect = 5e-17
Identities = 64/338 (18%), Positives = 95/338 (28%), Gaps = 97/338 (28%)
Query: 173 GLLVTDEQLWVEQRR-----FVLRQLREFGFGKRTMAQLVEEEAYQLVQLFKQEVQHLSL 227
GLL + W E R+ F+ + +R + +EEEA
Sbjct: 78 GLLTDWGESWKEARKALKDPFLPKNVR-------GYREAMEEEARAFFG---------EW 121
Query: 228 PGAIIPMRDAFSVPVLNTLWSMLAGIRYSPEDKELKKIQSLLTELFANIDMVGALFSQFP 287
G + L L L G SP E L + A AL
Sbjct: 122 RGEERDLDHEMLALSLRLLGRALFGKPLSPSLAEH--ALKALDRIMAQTRSPLALLDLAA 179
Query: 288 ILRYVAPEMSGYKSFVSIHQKVWKFLRNELDNHKETFNPDEMRDIMDVYLKTLKSEDKTD 347
R+ +K L E + L
Sbjct: 180 EARF---------------RKDRGALYREAE--------------------ALIVHPPLS 204
Query: 348 TFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFYLNRYLTSSMYTRSRRSLVQT 407
+ L+ + + +AG ET + LT S S R Q
Sbjct: 205 HLPRERALSEAVTLLVAGHETVASA-------------------LTWSFLLLSHRPDWQK 245
Query: 408 -----LPYLEAITYESVR-----VFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGV 457
A E++R + R R R L +P T ++ +
Sbjct: 246 RVAESEEAALAAFQEALRLYPPAWILTR------RLERPLLLGEDRLPPGTTLVLSP--Y 297
Query: 458 LMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAGP 495
+ + + D E FRPERFL ++G +Y PFG G
Sbjct: 298 VTQRLHFPDGEAFRPERFLEERGT--PSGRYFPFGLGQ 333
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty
acid biosynthesis, heme, iron, lipid synthesis, lyase,
metal-binding; HET: HEM; 1.80A {Parthenium argentatum}
PDB: 3dam_A* 3dbm_A*
Length = 473
Score = 106 bits (266), Expect = 2e-24
Identities = 30/200 (15%), Positives = 64/200 (32%), Gaps = 24/200 (12%)
Query: 633 FLRNELDNHKETFNPDEMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSK 692
L L D + + ++ +K + + I +
Sbjct: 227 RLPAFLIKSTYNKLYDYFQSVAT---PVMEQAEKLGVPKDEAVHNILFAVCFNTFGGVKI 283
Query: 693 SLGFGFLYL-LLHPDVQKKAQAEIDRVVGR--DRLPSLNDRPHMPYLEAITYESVR---- 745
++ L ++ + EI + D +L MP +++ YES+R
Sbjct: 284 LFPNTLKWIGLAGENLHTQLAEEIRGAIKSYGDGNVTLEAIEQMPLTKSVVYESLRIEPP 343
Query: 746 -VFMGRTFSIPHRALRDTTLQG----YFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERF 800
+A + T++ + + K M+ D + + PE + P+RF
Sbjct: 344 VPPQYG------KAKSNFTIESHDATFEVKKGEMLFGYQPFATKDPKVFDRPEEYVPDRF 397
Query: 801 LNDKGAIQVPDQYLPFGAGR 820
+ D A +Y+ + G
Sbjct: 398 VGDGEA---LLKYVWWSNGP 414
Score = 72.6 bits (178), Expect = 2e-13
Identities = 22/109 (20%), Positives = 45/109 (41%), Gaps = 18/109 (16%)
Query: 405 VQTLPYLEAITYESVR-----VFMGRTFSIPHRALRDTTLQG----YFIPKDTMIIANFN 455
++ +P +++ YES+R +A + T++ + + K M+
Sbjct: 324 IEQMPLTKSVVYESLRIEPPVPPQYG------KAKSNFTIESHDATFEVKKGEMLFGYQP 377
Query: 456 GVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAGPDRLLVTDEQ 504
D + + PE + P+RF+ D A +Y+ + GP+ T E
Sbjct: 378 FATKDPKVFDRPEEYVPDRFVGDGEA---LLKYVWWSNGPETESPTVEN 423
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid
biosynthesis, heme, iron, synthesis, lyase,
metal-binding, oxylipin biosynthesis; HET: HEM T25;
1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A*
3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Length = 495
Score = 105 bits (263), Expect = 6e-24
Identities = 43/308 (13%), Positives = 88/308 (28%), Gaps = 44/308 (14%)
Query: 525 RTMAQLVEEEAYQLVQLFKQEVQDGGAIIPMRDAFSVPVLNTLWSMLAGIRYSPEDKELK 584
+ + +L ++E+ G + N L G P D +LK
Sbjct: 153 NRIFPEFQATYSELFDSLEKELSLKGKAD-FGGSSDGTAFNFLARAFYGTN--PADTKLK 209
Query: 585 KIQSLLTELFANIDMVGALFSQFPILRYVAPEMSGYKSFVSIHQKVWKFLRNELDNHKET 644
L + LF+ P+L P + I + + K
Sbjct: 210 ADAPGLITKWV-------LFNLHPLLSIGLPRV--------IEEPLIHTFSLPPALVKSD 254
Query: 645 FNPDEMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLL-- 702
+ + + + E S + ++ A T + F ++
Sbjct: 255 YQ--RLYEFFLESAGEILVEADKLGISREEATH---NLLFATCFNTWGGMKILFPNMVKR 309
Query: 703 ---LHPDVQKKAQAEIDRVVGR-DRLPSLNDRPHMPYLEAITYESVR-----VFMGRTFS 753
V + EI V+ ++ M +++ YE +R
Sbjct: 310 IGRAGHQVHNRLAEEIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTAQYG--- 366
Query: 754 IPHRALRDTTLQ----GYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQV 809
RA +D ++ + + M+ D + + + F PERF+ ++G +
Sbjct: 367 ---RAKKDLVIESHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVGEEGEKLL 423
Query: 810 PDQYLPFG 817
G
Sbjct: 424 RHVLWSNG 431
Score = 66.5 bits (162), Expect = 1e-11
Identities = 15/97 (15%), Positives = 35/97 (36%), Gaps = 15/97 (15%)
Query: 405 VQTLPYLEAITYESVR-----VFMGRTFSIPHRALRDTTLQ----GYFIPKDTMIIANFN 455
++ + +++ YE +R RA +D ++ + + M+
Sbjct: 341 IEKMELTKSVVYECLRFEPPVTAQYG------RAKKDLVIESHDAAFKVKAGEMLYGYQP 394
Query: 456 GVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFG 492
D + + + F PERF+ ++G + G
Sbjct: 395 LATRDPKIFDRADEFVPERFVGEEGEKLLRHVLWSNG 431
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 83.7 bits (206), Expect = 1e-16
Identities = 100/668 (14%), Positives = 183/668 (27%), Gaps = 208/668 (31%)
Query: 93 KEMLSKEEFDGRPRGPFYETRT----WG-KRQGLMEGTVTAKVLSSLK----------RR 137
K +LSKEE D + T W + E V V L+ +
Sbjct: 43 KSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQ--EEMVQKFVEEVLRINYKFLMSPIKT 100
Query: 138 EKEDRIGESQPF---RERAGIKPVTALGYKVDVLLSKAGLLVTDEQLWVEQRRFVLRQLR 194
E+ ++ + R+R Y + + +K V+ Q + R L +LR
Sbjct: 101 EQRQPSMMTRMYIEQRDRL---------YNDNQVFAK--YNVSRLQP-YLKLRQALLELR 148
Query: 195 E---------FGFGKRTMAQLVEEEAYQLVQLFKQEVQHLSL-----PGAIIPMRDAFSV 240
G GK +A V Y++ ++ L+L P ++ M
Sbjct: 149 PAKNVLIDGVLGSGKTWVALDVCLS-YKVQCKMDFKIFWLNLKNCNSPETVLEM------ 201
Query: 241 PVLNTLWSMLAGIRYSPEDK------ELKKIQSLLTELFANIDMVGALFSQFPILRYVA- 293
L L + S D + IQ+ L L + L +L V
Sbjct: 202 --LQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLL----VLLNVQN 255
Query: 294 PEMSGYKSF--------VSIHQKVWKFLRNE------LDNHKETFNPDEMRDIMDVYLKT 339
+ + +F + ++V FL LD+H T PDE++
Sbjct: 256 AKA--WNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKS-------- 305
Query: 340 LKSEDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFYLNRYLTSSMYTR 399
LL +D LP + ++ + S+
Sbjct: 306 --------------LLLKYLDC------RPQDLPREVLTTNPRRL----------SIIAE 335
Query: 400 SRRSLVQTLPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYF-----IPKDTMIIANF 454
S R + T + + + + L + F P I
Sbjct: 336 SIRDGLATWDNWKHVNCDKLT----TIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTI- 390
Query: 455 NGVLMDKEFWHDPEVFRPERFLN------------DKGAIQVPDQYLPFGAGPDRLLVTD 502
+L W D +N + I +P YL L V
Sbjct: 391 --LLS--LIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYL-------ELKVKL 439
Query: 503 EQLWVEQRRFVLRQLREFGFGKRTMAQLVEEEAYQLVQLFKQEVQDGGAIIPMRDAFSVP 562
E + R V + Y + + F D P
Sbjct: 440 ENEYALHRSIV--------------------DHYNIPKTFDS------------DDLIPP 467
Query: 563 VLNTLWSM-----LAGIRYSPEDKELKK-------IQSLLTELFANIDMVGALFSQFPIL 610
L+ + L I + + ++ + + G++ + L
Sbjct: 468 YLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQL 527
Query: 611 RYVAPEMSGYKSFVSIHQKVWKFLRNE----LDNHKETFNPDEMRDIMDVYLKTLKSEDK 666
++ YK ++ + ++ L N L +E + D++ + L
Sbjct: 528 KF-------YKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIF 580
Query: 667 TDTFSESQ 674
+ + Q
Sbjct: 581 EEAHKQVQ 588
Score = 73.3 bits (179), Expect = 2e-13
Identities = 82/577 (14%), Positives = 171/577 (29%), Gaps = 151/577 (26%)
Query: 306 HQKVWKFLRNELDNH--------KETFNPD-EMRDIMDVYLKTLKSEDKTDTFSESQLLA 356
H F E ++ F + + +D+ D+ L E+ ++
Sbjct: 3 HHHHMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVS 62
Query: 357 ICMDMFMAGSETTTTLPSRHVNSHDMIVCFYLNR---YLTSSMYTRSRRSLVQTLPYLEA 413
+ +F TL S+ V L +L S + T R+ + T Y+E
Sbjct: 63 GTLRLF-------WTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQ 115
Query: 414 I--TYESVRVFMGRTFSI--PHRALRDTTLQGYFIPKDTMIIANFNG----VLMDKEFWH 465
Y +VF S P+ LR L+ P ++I G +
Sbjct: 116 RDRLYNDNQVFAKYNVSRLQPYLKLRQALLE--LRPAKNVLIDGVLGSGKTWVA------ 167
Query: 466 DPEVFRPERFLNDKGAIQVPDQ--YLPFG--AGPDRLLVTDEQLWVEQRRFVLRQLREFG 521
+V + ++ + +L P+ +L ++L + +
Sbjct: 168 -LDVCLSYKVQC-----KMDFKIFWLNLKNCNSPETVLEMLQKLLYQ----IDPNWTSRS 217
Query: 522 FGKRTMAQLVEEEAYQLVQLFKQE-----------VQDGGAIIPMRDAFSV--PVLNT-- 566
+ + +L +L K + VQ+ A +AF++ +L T
Sbjct: 218 DHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAW----NAFNLSCKILLTTR 273
Query: 567 ---LWSMLAGIRYS-----PEDKELKKIQSLLTELFANIDMVGALFSQFPILRYVAPEMS 618
+ L+ + L + L + P E+
Sbjct: 274 FKQVTDFLSAATTTHISLDHHSMTLTPDEVK--SLLLKY--LDCRPQDLP------REVL 323
Query: 619 GYKSF-VSIHQKVWKFLRNELD--NHKETFNPDEMRDIMDVYLKTLKSEDKTDTFSE--- 672
+SI + + +R+ L ++ + N D++ I++ L L+ + F
Sbjct: 324 TTNPRRLSI---IAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSV 380
Query: 673 --------SQLLAI--------CMDMFMAGSETTSKSL----GFGFLYLLLHPDVQKKAQ 712
+ LL++ + + + ++ SL + P + + +
Sbjct: 381 FPPSAHIPTILLSLIWFDVIKSDVMVVV--NKLHKYSLVEKQPKESTISI--PSIYLELK 436
Query: 713 AEIDRVVGRDRLPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKD 772
++ + +L H ++ Y + F P+ L YF
Sbjct: 437 VKL------ENEYAL----HRSIVDH--YNIPKTFDSDDLIPPY-------LDQYF---- 473
Query: 773 TMIIANFNG-----VLMDKEFWHDPEVFRPERFLNDK 804
+ G + + VF RFL K
Sbjct: 474 ----YSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQK 506
Score = 71.4 bits (174), Expect = 9e-13
Identities = 92/554 (16%), Positives = 152/554 (27%), Gaps = 182/554 (32%)
Query: 319 NHKETFNPDEM----RDIMDVYLKTLKSE-DKTDTFSESQLLAICMDMFMAGSETTTTLP 373
+H F E +DI+ V+ D D DM + L
Sbjct: 4 HHHMDFETGEHQYQYKDILSVFEDAFVDNFDCKDV----------QDM------PKSILS 47
Query: 374 SRHVNSHDMIVCFYLNRYLTSSMYTRSRRSLVQTLPYLEAITYESVRVFMGRTFSIPHRA 433
+ D I+ ++ + + R L TL + E V+ F+ I ++
Sbjct: 48 KEEI---DHII-------MSKDAVSGTLR-LFWTL---LSKQEEMVQKFVEEVLRINYKF 93
Query: 434 LRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGA 493
L P +M+ + D+ ++D +VF N
Sbjct: 94 LMSPIKTEQRQP--SMMTRMYIEQR-DR-LYNDNQVFAK---YN---------------- 130
Query: 494 GPDRLLVTDEQLWVEQRRFVLRQLRE---------FGFGKRTMAQLVEEEAYQLVQLFKQ 544
V+ Q + R L +LR G GK +A V +K
Sbjct: 131 ------VSRLQP-YLKLRQALLELRPAKNVLIDGVLGSGKTWVALDV-------CLSYKV 176
Query: 545 EVQDGGAIIPMRDAFSVPVLNTLWSMLAGIRYSPEDKELKKIQSLLTELFANIDMVGALF 604
+ + I F W + SPE L+ +Q LL ++ N +
Sbjct: 177 QCKMDFKI------F--------W-LNLKNCNSPET-VLEMLQKLLYQIDPNWT-SRSDH 219
Query: 605 SQFPILRYVAPEMSGYKSFVSIHQKVWKFLRNE--------LDN--HKETFNPDEMRDIM 654
S LR SI ++ + L+++ L N + + +N
Sbjct: 220 SSNIKLR-----------IHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNA------F 262
Query: 655 DVYLKTL-KSEDK--TDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKA 711
++ K L + K TD S + I +D T + L L Q
Sbjct: 263 NLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMT-LTPDEVKSL--LLKYLDCRPQD-- 317
Query: 712 QAEIDRVVGRDRLPSLNDRPHMPYLEAITYESVRVFMGR--------------TFSIPHR 757
LP + P +I ES+R +
Sbjct: 318 ------------LPREVLTTN-PRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLN 364
Query: 758 ALRDTTLQGYF-----IPKDTMIIANFNGVLMDKEFWHDPEVFRPERFLN---------- 802
L + F P I +L W D +N
Sbjct: 365 VLEPAEYRKMFDRLSVFPPSAHIPTI---LLS--LIWFDVIKSDVMVVVNKLHKYSLVEK 419
Query: 803 --DKGAIQVPDQYL 814
+ I +P YL
Sbjct: 420 QPKESTISIPSIYL 433
Score = 36.4 bits (83), Expect = 0.042
Identities = 42/318 (13%), Positives = 96/318 (30%), Gaps = 66/318 (20%)
Query: 66 LSKQYGPVVGLRVGKDRQVVCFGYPAIKEMLSKEEFDGRPRGPFYETRTWGKRQGLMEGT 125
L K + R + V P ++++ DG ++ K ++E +
Sbjct: 307 LLK----YLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESS 362
Query: 126 VTAKVLSSLKRREKEDRIGESQPFRERAGIKPVTALGYKVDVLLSKAGLLVTDEQLWVE- 184
+ VL + R+ DR+ F A I +L +W +
Sbjct: 363 L--NVLEPAEYRKMFDRLS---VFPPSAHIPT--------ILL----------SLIWFDV 399
Query: 185 -------------QRRFVLRQLREFGFGKRTMAQLVEEEAYQLVQLFKQEVQHLSLPGAI 231
+ V +Q +E ++ ++ + L + V H ++P
Sbjct: 400 IKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTF 459
Query: 232 IPMRDAFSVPVLNTLWSM-----LAGIRYSPEDKELKK-------IQSLLTELFANIDMV 279
D P L+ + L I + + ++ + +
Sbjct: 460 DS--DDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNAS 517
Query: 280 GALFSQFPILRYVAPEMSGYKSFVSIHQKVWKFLRNE----LDNHKETFNPDEMRDIMDV 335
G++ + L++ YK ++ + ++ L N L +E + D++ +
Sbjct: 518 GSILNTLQQLKF-------YKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRI 570
Query: 336 YLKTLKSEDKTDTFSESQ 353
L + + Q
Sbjct: 571 ALMAEDEAIFEEAHKQVQ 588
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein,
oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB:
3nc5_A* 3nc6_A* 3nc7_A*
Length = 441
Score = 72.0 bits (177), Expect = 3e-13
Identities = 39/162 (24%), Positives = 66/162 (40%), Gaps = 30/162 (18%)
Query: 664 EDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDR 723
E + S+ +LA+ +++ +A +E K+L +LL +P+ A+ R
Sbjct: 248 EYEGMALSDKDILALILNVLLAATEPADKTLALMIYHLLNNPEQMNDVLAD------RSL 301
Query: 724 LPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMII-----AN 778
+P E + Y+ + R +DT + G I KDT++ AN
Sbjct: 302 VPRAIA-------ETLRYKPPVQLIPRQ------LSQDTVVGGMEIKKDTIVFCMIGAAN 348
Query: 779 FNGVLMDKEFWHDPEVFRPER-FLNDKGAIQVPDQYLPFGAG 819
D E + P+VF R L K A ++L FG+G
Sbjct: 349 R-----DPEAFEQPDVFNIHREDLGIKSAFSGAARHLAFGSG 385
Score = 52.3 bits (126), Expect = 4e-07
Identities = 38/172 (22%), Positives = 61/172 (35%), Gaps = 52/172 (30%)
Query: 343 EDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFYLNRYLTSSMYT---- 398
E + S+ +LA+ +++ +A +E L +Y
Sbjct: 248 EYEGMALSDKDILALILNVLLAATEPADKT-------------------LALMIYHLLNN 288
Query: 399 -------RSRRSLVQTLPYL--EAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTM 449
+ RSLV P E + Y+ + R +DT + G I KDT+
Sbjct: 289 PEQMNDVLADRSLV---PRAIAETLRYKPPVQLIPRQ------LSQDTVVGGMEIKKDTI 339
Query: 450 II-----ANFNGVLMDKEFWHDPEVFRPER-FLNDKGAIQVPDQYLPFGAGP 495
+ AN D E + P+VF R L K A ++L FG+G
Sbjct: 340 VFCMIGAANR-----DPEAFEQPDVFNIHREDLGIKSAFSGAARHLAFGSGI 386
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron,
metal-binding, oxidoreductase, substrate-soaking,
cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB:
1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A*
2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A*
1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Length = 415
Score = 66.6 bits (163), Expect = 1e-11
Identities = 24/156 (15%), Positives = 47/156 (30%), Gaps = 29/156 (18%)
Query: 664 EDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDR 723
+ + + +C + + G +T L F +L P+ +++ +R
Sbjct: 228 QVNGRPITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELIER------PER 281
Query: 724 LPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVL 783
+P+ + E + S+ V GR D G + K I+
Sbjct: 282 IPAACE-------ELLRRFSL-VADGRI------LTSDYEFHGVQLKKGDQILLPQMLSG 327
Query: 784 MDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAG 819
+D+ P R + FG G
Sbjct: 328 LDERENACPMHVDFSR---------QKVSHTTFGHG 354
Score = 43.8 bits (104), Expect = 2e-04
Identities = 23/168 (13%), Positives = 38/168 (22%), Gaps = 55/168 (32%)
Query: 343 EDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFYLNRYLTSSMYT---- 398
+ + + +C + + G +T L+ SM
Sbjct: 228 QVNGRPITSDEAKRMCGLLLVGGLDTVVNF-------------------LSFSMEFLAKS 268
Query: 399 -------RSRRSLVQTLPYLEAITYESVR----VFMGRTFSIPHRALRDTTLQGYFIPKD 447
R + A E +R V GR D G + K
Sbjct: 269 PEHRQELIERPERIPA-----ACE-ELLRRFSLVADGRI------LTSDYEFHGVQLKKG 316
Query: 448 TMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAGP 495
I+ +D+ P R + FG G
Sbjct: 317 DQILLPQMLSGLDERENACPMHVDFSR---------QKVSHTTFGHGS 355
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A
{Novosphingobium aromaticivorans} PDB: 3ofu_A*
Length = 396
Score = 66.1 bits (162), Expect = 2e-11
Identities = 31/162 (19%), Positives = 54/162 (33%), Gaps = 39/162 (24%)
Query: 664 EDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDR 723
++ + +C ++ G +T + +G L+L HP+ Q+ + D
Sbjct: 213 PVGGRPWTVDEARRMCRNLLFGGLDTVAAMIGMVALHLARHPEDQRLLRER------PDL 266
Query: 724 LPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMII-----AN 778
+P+ D E + V + R A+ D G I K ++ N
Sbjct: 267 IPAAAD-------ELMRRYPT-VAVSRN------AVADVDADGVTIRKGDLVYLPSVLHN 312
Query: 779 FNGVLMDKEFWHDPEVF-RPERFLNDKGAIQVPDQYLPFGAG 819
DP F PE D+G P ++ G G
Sbjct: 313 -----------LDPASFEAPEEVRFDRGL--APIRHTTMGVG 341
Score = 45.7 bits (109), Expect = 4e-05
Identities = 25/174 (14%), Positives = 42/174 (24%), Gaps = 65/174 (37%)
Query: 343 EDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFYLNRYLTSSMYT---- 398
++ + +C ++ G +T + +
Sbjct: 213 PVGGRPWTVDEARRMCRNLLFGGLDTVAAM-------------------IGMVALHLARH 253
Query: 399 -------RSRRSLVQTLPYLEAIT----YESVRVFMGRTFSIPHRALRDTTLQGYFIPKD 447
R R L+ A V + R A+ D G I K
Sbjct: 254 PEDQRLLRERPDLIPA-----AADELMRRYPT-VAVSRN------AVADVDADGVTIRKG 301
Query: 448 TMII-----ANFNGVLMDKEFWHDPEVF-RPERFLNDKGAIQVPDQYLPFGAGP 495
++ N DP F PE D+G P ++ G G
Sbjct: 302 DLVYLPSVLHN-----------LDPASFEAPEEVRFDRGL--APIRHTTMGVGA 342
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena
oxidoreductase; HET: HEM; 2.20A {Novosphingobium
aromaticivorans} PDB: 3lxi_A*
Length = 421
Score = 66.2 bits (162), Expect = 2e-11
Identities = 26/156 (16%), Positives = 46/156 (29%), Gaps = 29/156 (18%)
Query: 664 EDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDR 723
E + + L + + + G +T LGF +YL HP+ + + E +
Sbjct: 235 EIDGKPMPDDRALGLVSLLLLGGLDTVVNFLGFMMIYLSRHPETVAEMRRE------PLK 288
Query: 724 LPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVL 783
L + E +V V R + D G + + +I+
Sbjct: 289 LQRGVE-------ELFRRFAV-VSDARY------VVSDMEFHGTMLKEGDLILLPTALHG 334
Query: 784 MDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAG 819
+D DP R + F G
Sbjct: 335 LDDRHHDDPMTVDLSR---------RDVTHSTFAQG 361
Score = 44.6 bits (106), Expect = 1e-04
Identities = 22/168 (13%), Positives = 37/168 (22%), Gaps = 55/168 (32%)
Query: 343 EDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFYLNRYLTSSMYT---- 398
E + + L + + + G +T L M
Sbjct: 235 EIDGKPMPDDRALGLVSLLLLGGLDTVVNF-------------------LGFMMIYLSRH 275
Query: 399 -------RSRRSLVQTLPYLEAITYESVR----VFMGRTFSIPHRALRDTTLQGYFIPKD 447
R +Q + E R V R + D G + +
Sbjct: 276 PETVAEMRREPLKLQR-----GVE-ELFRRFAVVSDARY------VVSDMEFHGTMLKEG 323
Query: 448 TMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAGP 495
+I+ +D DP R + F GP
Sbjct: 324 DLILLPTALHGLDDRHHDDPMTVDLSR---------RDVTHSTFAQGP 362
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase,
metal-binding, AN biosynthesis, TIE-ROD mechanism of
action; HET: HEM; 1.59A {Saccharopolyspora erythraea}
PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Length = 411
Score = 65.8 bits (161), Expect = 2e-11
Identities = 36/161 (22%), Positives = 52/161 (32%), Gaps = 36/161 (22%)
Query: 664 EDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDR 723
E + + + +AG TT+ LG L HP A + R
Sbjct: 220 EVDGRALDDEEAANFSTALLLAGHITTTVLLGNIVRTLDEHPAHWDAAAED------PGR 273
Query: 724 LPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMII-----AN 778
+P++ + E + Y M RT + T + G IP D M+ AN
Sbjct: 274 IPAIVE-------EVLRYRPPFPQMQRT------TTKATEVAGVPIPADVMVNTWVLSAN 320
Query: 779 FNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAG 819
D + DP+ F P R L FG G
Sbjct: 321 R-----DSDAHDDPDRFDPSRKSGGA-------AQLSFGHG 349
Score = 45.3 bits (108), Expect = 6e-05
Identities = 33/171 (19%), Positives = 47/171 (27%), Gaps = 58/171 (33%)
Query: 343 EDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFYLNRYLTSSMYT---- 398
E + + + +AG TTT L L + + T
Sbjct: 220 EVDGRALDDEEAANFSTALLLAGHITTTVL-------------------LGNIVRTLDEH 260
Query: 399 -------RSRRSLVQTLPYL--EAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTM 449
+P + E + Y M RT + T + G IP D M
Sbjct: 261 PAHWDAAAEDPGR---IPAIVEEVLRYRPPFPQMQRT------TTKATEVAGVPIPADVM 311
Query: 450 II-----ANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAGP 495
+ AN D + DP+ F P R L FG G
Sbjct: 312 VNTWVLSANR-----DSDAHDDPDRFDPSRKSGGA-------AQLSFGHGV 350
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM
EDO; 1.37A {Citrobacter braakii} PDB: 1t2b_A* 3bdz_A*
3be0_A*
Length = 398
Score = 65.3 bits (160), Expect = 3e-11
Identities = 24/161 (14%), Positives = 56/161 (34%), Gaps = 39/161 (24%)
Query: 664 EDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDR 723
+ ++ SE L+ + + G + T++ L F L +++++ A +
Sbjct: 211 KIDGESLSEDDLIGFFTILLLGGIDNTARFLSSVFWRLAWDIELRRRLIAH------PEL 264
Query: 724 LPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMII-----AN 778
+P+ D E + + +GR ++ T+ + + A+
Sbjct: 265 IPNAVD-------ELLRFYGP-AMVGRL------VTQEVTVGDITMKPGQTAMLWFPIAS 310
Query: 779 FNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAG 819
D+ + P+ ER P+++L G G
Sbjct: 311 R-----DRSAFDSPDNIVIER---------TPNRHLSLGHG 337
Score = 46.1 bits (110), Expect = 3e-05
Identities = 23/173 (13%), Positives = 49/173 (28%), Gaps = 65/173 (37%)
Query: 343 EDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFYLNRYLTSSMYT---- 398
+ ++ SE L+ + + G + T L+S +
Sbjct: 211 KIDGESLSEDDLIGFFTILLLGGIDNTARF-------------------LSSVFWRLAWD 251
Query: 399 -------RSRRSLVQTLPYLEAITYESVR----VFMGRTFSIPHRALRDTTLQGYFIPKD 447
+ L+ A+ E +R +GR ++ T+ +
Sbjct: 252 IELRRRLIAHPELIPN-----AVD-ELLRFYGPAMVGRL------VTQEVTVGDITMKPG 299
Query: 448 TMII-----ANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAGP 495
+ A+ D+ + P+ ER P+++L G G
Sbjct: 300 QTAMLWFPIASR-----DRSAFDSPDNIVIER---------TPNRHLSLGHGI 338
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A
{Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A*
4dnz_A*
Length = 412
Score = 64.6 bits (158), Expect = 5e-11
Identities = 30/161 (18%), Positives = 51/161 (31%), Gaps = 38/161 (23%)
Query: 664 EDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDR 723
T + + + + AG +TT + L PD + +A+
Sbjct: 230 FSDTGEITPEEAPLLVRSLLSAGLDTTVNGIAAAVYCLARFPDEFARLRAD------PSL 283
Query: 724 LPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMII-----AN 778
+ + EA+ +ES RT RD L G I + ++ AN
Sbjct: 284 ARNAFE-------EAVRFESPVQTFFRT------TTRDVELAGATIGEGEKVLMFLGSAN 330
Query: 779 FNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAG 819
D W DP+ + R ++ FG+G
Sbjct: 331 R-----DPRRWDDPDRYDITR---------KTSGHVGFGSG 357
Score = 46.5 bits (111), Expect = 3e-05
Identities = 29/173 (16%), Positives = 49/173 (28%), Gaps = 64/173 (36%)
Query: 343 EDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFYLNRYLTSSMYT---- 398
T + + + + AG +TT + +++Y
Sbjct: 230 FSDTGEITPEEAPLLVRSLLSAGLDTTVNG-------------------IAAAVYCLARF 270
Query: 399 -------RSRRSLVQTLPYLEAIT----YESVRVFMGRTFSIPHRALRDTTLQGYFIPKD 447
R+ SL + A +ES RT RD L G I +
Sbjct: 271 PDEFARLRADPSLARN-----AFEEAVRFESPVQTFFRT------TTRDVELAGATIGEG 319
Query: 448 TMII-----ANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAGP 495
++ AN D W DP+ + R ++ FG+G
Sbjct: 320 EKVLMFLGSANR-----DPRRWDDPDRYDITR---------KTSGHVGFGSGV 358
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase,
oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus}
PDB: 2rfc_A*
Length = 343
Score = 64.1 bits (157), Expect = 5e-11
Identities = 31/162 (19%), Positives = 56/162 (34%), Gaps = 43/162 (26%)
Query: 664 EDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDR 723
K + + + M + + G+ETT+ +G + +PD+ A V
Sbjct: 167 SLKNRKLTMDEKIKYIMLLIIGGNETTTNLIGNMIRVIDENPDIIDDALKNRSGFVE--- 223
Query: 724 LPSLNDRPHMPYLEAITYES-VRVFMGRTFSIPHRALRDTTLQGYFIPKDTMII-----A 777
E + Y S ++ R A D+ + I K +I A
Sbjct: 224 -------------ETLRYYSPIQFLPHRF------AAEDSYINNKKIKKGDQVIVYLGSA 264
Query: 778 NFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAG 819
N D+ F+ +P++F+ R + +L FG G
Sbjct: 265 NR-----DETFFDEPDLFKIGR----------REMHLAFGIG 291
Score = 44.5 bits (106), Expect = 9e-05
Identities = 28/166 (16%), Positives = 53/166 (31%), Gaps = 53/166 (31%)
Query: 343 EDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFYLNRYLTSSMYTRSR- 401
K + + + M + + G+ETTT L + + +
Sbjct: 167 SLKNRKLTMDEKIKYIMLLIIGGNETTTNL-------------------IGNMIRVIDEN 207
Query: 402 ----RSLVQTLPYL--EAITYES-VRVFMGRTFSIPHRALRDTTLQGYFIPKDTMII--- 451
++ E + Y S ++ R A D+ + I K +I
Sbjct: 208 PDIIDDALKNRSGFVEETLRYYSPIQFLPHRF------AAEDSYINNKKIKKGDQVIVYL 261
Query: 452 --ANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAGP 495
AN D+ F+ +P++F+ R + +L FG G
Sbjct: 262 GSANR-----DETFFDEPDLFKIGR----------REMHLAFGIGI 292
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent,
mono-oxygenases, oxidoreductase; HET: HEM; 2.00A
{Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Length = 417
Score = 64.3 bits (157), Expect = 6e-11
Identities = 24/156 (15%), Positives = 49/156 (31%), Gaps = 29/156 (18%)
Query: 664 EDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDR 723
E + + + + + + G +T L F ++L HP++ + +++ +
Sbjct: 234 EINGERIAHDKAQGLISLLLLGGLDTVVNFLSFFMIHLARHPELVAELRSD------PLK 287
Query: 724 LPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVL 783
L + E V V R +D +G F+ + MI+
Sbjct: 288 LMRGAE-------EMFRRFPV-VSEARM------VAKDQEYKGVFLKRGDMILLPTALHG 333
Query: 784 MDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAG 819
+D +P R + FG G
Sbjct: 334 LDDAANPEPWKLDFSR---------RSISHSTFGGG 360
Score = 43.1 bits (102), Expect = 3e-04
Identities = 23/168 (13%), Positives = 40/168 (23%), Gaps = 55/168 (32%)
Query: 343 EDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFYLNRYLTSSMYT---- 398
E + + + + + + G +T L+ M
Sbjct: 234 EINGERIAHDKAQGLISLLLLGGLDTVVNF-------------------LSFFMIHLARH 274
Query: 399 -------RSRRSLVQTLPYLEAITYESVR----VFMGRTFSIPHRALRDTTLQGYFIPKD 447
RS + E R V R +D +G F+ +
Sbjct: 275 PELVAELRSDPLKLMR-----GAE-EMFRRFPVVSEARM------VAKDQEYKGVFLKRG 322
Query: 448 TMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAGP 495
MI+ +D +P R + FG GP
Sbjct: 323 DMILLPTALHGLDDAANPEPWKLDFSR---------RSISHSTFGGGP 361
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 65.5 bits (159), Expect = 6e-11
Identities = 99/637 (15%), Positives = 195/637 (30%), Gaps = 254/637 (39%)
Query: 222 VQHLSLP-GAIIPMRDAFSVPVLNTLWSMLAGIRYSPEDKELKKIQSLLTELFANIDMVG 280
+ L+L G++ VP + + + ++ ++ KI TE FA D
Sbjct: 6 TRPLTLSHGSL---EHVLLVP--TASFFIASQLQ-----EQFNKILPEPTEGFAADDEPT 55
Query: 281 A---LFSQFPILRYVAPEMSGYKSFVSIHQKVWKFLRNELDNHKETFNPDEMRDIMDVYL 337
L +F L YV+ + P ++ V L
Sbjct: 56 TPAELVGKF--LGYVSSLVE----------------------------PSKVGQFDQV-L 84
Query: 338 KTLKSEDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFYLNRYLTSSMY 397
+E F E+ ++ G++ +++ L + +
Sbjct: 85 NLCLTE-----F-ENC--------YLEGND---------IHA------------LAAKLL 109
Query: 398 TRSRRSLVQTLPYLEAITYESVRVFMGRTFSIPHR-ALRDTTLQGYFIPKDTMIIANFNG 456
+ +LV+T ++ Y + R+ R F AL +G + ++A F G
Sbjct: 110 QENDTTLVKTKELIKN--YITARIMAKRPFDKKSNSALFRAVGEG-----NAQLVAIFGG 162
Query: 457 VLMDKEFWHDPEVFRPERFLNDKGAIQ-VPDQYLPFGAGPDRLLVTDEQLWVEQRRFVLR 515
Q D Y +E LR
Sbjct: 163 --------------------------QGNTDDYF------------EE----------LR 174
Query: 516 QLREFGFGKRTMAQLVEEEAYQLVQLFKQEVQ---------------DGGAIIPMRDAF- 559
L + + L++ A L +L + + + + P +D
Sbjct: 175 DL--YQTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQGLNILEWLENPSNTPDKDYLL 232
Query: 560 SVPV---LNTLWSM--------LAGIRYSPEDKELKKI--------QSLLT--------- 591
S+P+ L + + L G ++P EL+ Q L+T
Sbjct: 233 SIPISCPLIGVIQLAHYVVTAKLLG--FTPG--ELRSYLKGATGHSQGLVTAVAIAETDS 288
Query: 592 --ELFANID-MVGALF-----SQ--FPILRYVAPEMSGYKSFVSIHQKVWKFLRNELDNH 641
F ++ + LF +P + P + L + L+N+
Sbjct: 289 WESFFVSVRKAITVLFFIGVRCYEAYPNT-SLPPSI----------------LEDSLENN 331
Query: 642 KETFNPDEMRDIMDVYLKTLKSE-DKTDT-FSESQLLAICM----DMF-MAGSETTSKSL 694
+ P M I ++ + ++ +KT++ + + I + ++G +SL
Sbjct: 332 EGV--PSPMLSISNLTQEQVQDYVNKTNSHLPAGKQVEISLVNGAKNLVVSGP---PQSL 386
Query: 695 GFGFLYLLLHPDVQKKAQAEID--RVVGRDRLPSLNDR------P-HMPYLEAITYESVR 745
+G L L L + KA + +D R+ +R ++R P H L + +
Sbjct: 387 -YG-LNLTLR---KAKAPSGLDQSRIPFSERKLKFSNRFLPVASPFHSHLLVPASDLINK 441
Query: 746 VFMGRTFSIPHRALRDTTLQGYFIP-KDTMIIANFNG 781
+ S + ++ IP DT F+G
Sbjct: 442 DLVKNNVSFNAKDIQ--------IPVYDT-----FDG 465
Score = 53.5 bits (128), Expect = 3e-07
Identities = 96/605 (15%), Positives = 167/605 (27%), Gaps = 200/605 (33%)
Query: 174 LLVTDEQLWVEQRRFVLRQLREFGFGKRTMAQLVEEEAYQ--------LVQLFKQEVQHL 225
LLV + F+ QL+E F K + + E A LV F V L
Sbjct: 20 LLV-PTASF-----FIASQLQEQ-FNK-ILPEPTEGFAADDEPTTPAELVGKFLGYVSSL 71
Query: 226 SLPGAIIPMRDAFSVPVLNTLW-----SMLAGIRYSPEDKELKKIQSLLTELFANIDMVG 280
P + VLN L G D I +L +L D
Sbjct: 72 VEPSKVGQFDQ-----VLNLCLTEFENCYLEG-----ND-----IHALAAKLLQEND--T 114
Query: 281 ALFSQFPILR-YVAPEMSGYKSFVSIHQKVWKFLRNELDNHKETF-------NP----DE 328
L +++ Y+ + + F R + + + N +E
Sbjct: 115 TLVKTKELIKNYITARIMAKRPFDKKSNS--ALFRAVGEGNAQLVAIFGGQGNTDDYFEE 172
Query: 329 MRDIMDVY--------------LKTL--KSEDKTDTFSESQLLAICMDMFMAGSETTTTL 372
+RD+ Y L L + D F++ ++ + E +
Sbjct: 173 LRDLYQTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQG------LN-ILEWLENPSNT 225
Query: 373 PSRHVNSHDMIVCFYLNRYLTSSMYTRSRRS-----LVQTLPYLEAITYESVRVFMGRTF 427
P + YL S S ++Q Y+ V +
Sbjct: 226 PDKD--------------YLLSIPI-----SCPLIGVIQLAHYV---------VT-AKLL 256
Query: 428 SIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERFL-NDKGAIQVPD 486
LR L+G ++ A + W E F + + AI
Sbjct: 257 GFTPGELRS-YLKGATGHSQGLVTAVA--IAETDS-W--------ESFFVSVRKAI---- 300
Query: 487 QYLPFGAGPDRLLVTDEQLWVEQRRF--------VLRQLREFGFGKRT-MAQLVEEEAYQ 537
L F G + +L E G + M +
Sbjct: 301 TVL-FFIG-----------VRCYEAYPNTSLPPSILEDSLENNEGVPSPMLSI---SNLT 345
Query: 538 LVQLFKQEVQDGGAIIPMRDAFSVPVLNTLWSM-LAGIRYSPEDKELKKIQSLLTELFA- 595
Q+ V + +P + ++N ++ ++G P+ L + L + A
Sbjct: 346 QEQVQDY-VNKTNSHLPAGKQVEISLVNGAKNLVVSG---PPQS--LYGLNLTLRKAKAP 399
Query: 596 -NIDMVGALFSQ--------F-PILRYVAPEMSGYKSFVSIH----QKVWKFLRNELDNH 641
+D FS+ F P+ +P F H + +L +
Sbjct: 400 SGLDQSRIPFSERKLKFSNRFLPVA---SP-------F---HSHLLVPASDLINKDLVKN 446
Query: 642 KETFNPDEMRDIMDVYLKTLKSEDKTD--TFSESQLLAICMDMF-------MAGSETTSK 692
+FN +++ + VY + D +D S S I + +
Sbjct: 447 NVSFNAKDIQ--IPVY----DTFDGSDLRVLSGSISERIVDCIIRLPVKWETTTQFKATH 500
Query: 693 SLGFG 697
L FG
Sbjct: 501 ILDFG 505
Score = 30.0 bits (67), Expect = 3.9
Identities = 32/163 (19%), Positives = 51/163 (31%), Gaps = 52/163 (31%)
Query: 41 PILG-SALAIQKLRNQTGYLYQACAELSKQYGPVVGLRVGKDRQVVCFGYPAIKEMLSKE 99
P+L S L +++++ Y+ + + L + L G VV G P + L
Sbjct: 337 PMLSISNLTQEQVQD---YVNKTNSHLPAGKQVEISLVNGAKNLVVS-GPP---QSL--- 386
Query: 100 EFDGRPRGPFYETRTWGKRQGLMEGTVTAKVLSSLKRREKED--RIGESQPFRERAGIKP 157
GL L K D RI PF ER K
Sbjct: 387 -------------------YGL------NLTLRKAKAPSGLDQSRI----PFSER---KL 414
Query: 158 VTALGY-KVDV-----LLSKAGLLVTDEQLWVEQRRFVLRQLR 194
+ + V LL A L+ ++ L F + ++
Sbjct: 415 KFSNRFLPVASPFHSHLLVPASDLI-NKDLVKNNVSFNAKDIQ 456
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12;
1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Length = 418
Score = 64.2 bits (157), Expect = 6e-11
Identities = 32/156 (20%), Positives = 57/156 (36%), Gaps = 28/156 (17%)
Query: 664 EDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDR 723
E+ D +E +++A C + +AG ETT + L +L P A+ R
Sbjct: 235 EESGDQLTEDEIIATCNLLLIAGHETTVNLIANAALAMLRTPGQWAALAAD------GSR 288
Query: 724 LPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVL 783
++ + E + Y+ + R A D T+ + +PK ++
Sbjct: 289 ASAVIE-------ETMRYDPPVQLVSRY------AGDDLTIGTHTVPKGDTMLLLLAAAH 335
Query: 784 MDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAG 819
D P+ F P+R ++L FG G
Sbjct: 336 RDPTIVGAPDRFDPDR---------AQIRHLGFGKG 362
Score = 46.9 bits (112), Expect = 2e-05
Identities = 29/168 (17%), Positives = 51/168 (30%), Gaps = 54/168 (32%)
Query: 343 EDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFYLNRYLTSSMYT---- 398
E+ D +E +++A C + +AG ETT L + ++
Sbjct: 235 EESGDQLTEDEIIATCNLLLIAGHETTVNL-------------------IANAALAMLRT 275
Query: 399 -------RSRRSLVQTLPYLEAIT----YESVRVFMGRTFSIPHRALRDTTLQGYFIPKD 447
+ S I Y+ + R A D T+ + +PK
Sbjct: 276 PGQWAALAADGSRASA-----VIEETMRYDPPVQLVSRY------AGDDLTIGTHTVPKG 324
Query: 448 TMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAGP 495
++ D P+ F P+R ++L FG G
Sbjct: 325 DTMLLLLAAAHRDPTIVGAPDRFDPDR---------AQIRHLGFGKGA 363
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM;
1.60A {Mycobacterium tuberculosis}
Length = 398
Score = 63.8 bits (156), Expect = 9e-11
Identities = 29/143 (20%), Positives = 47/143 (32%), Gaps = 36/143 (25%)
Query: 664 EDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDR 723
E + S+ +L+ + + + G ETT +L G LL + D Q +
Sbjct: 209 EVDGERLSDDELVMETLLILIGGDETTRHTLSGGTEQLLRNRDQWDLLQRD------PSL 262
Query: 724 LPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMII-----AN 778
LP + E + + + M R DT G + ++ AN
Sbjct: 263 LPGAIE-------EMLRWTAPVKNMCRV------LTADTEFHGTALCAGEKMMLLFESAN 309
Query: 779 FNGVLMDKEFWHDPEVF-RPERF 800
D VF PE+F
Sbjct: 310 -----------FDEAVFCEPEKF 321
Score = 43.8 bits (104), Expect = 2e-04
Identities = 29/169 (17%), Positives = 51/169 (30%), Gaps = 56/169 (33%)
Query: 343 EDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFYLNRYLTSSMYT---- 398
E + S+ +L+ + + + G ETT L+
Sbjct: 209 EVDGERLSDDELVMETLLILIGGDETTRHT-------------------LSGGTEQLLRN 249
Query: 399 -------RSRRSLVQTLPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMII 451
+ SL+ E + + + M R DT G + ++
Sbjct: 250 RDQWDLLQRDPSLLPGAIE-EMLRWTAPVKNMCRV------LTADTEFHGTALCAGEKMM 302
Query: 452 -----ANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAGP 495
ANF D+ + +PE F +R P+ +L FG G
Sbjct: 303 LLFESANF-----DEAVFCEPEKFDVQR---------NPNSHLAFGFGT 337
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase,
heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A
{Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A*
1pkf_A*
Length = 419
Score = 63.0 bits (154), Expect = 2e-10
Identities = 34/157 (21%), Positives = 57/157 (36%), Gaps = 29/157 (18%)
Query: 664 EDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDR 723
E S +L+A+ + AG++TT + F L LL P+ + +AE
Sbjct: 233 EADGSRLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALELVKAE------PGL 286
Query: 724 LPSLNDRPHMPYLEAITYES-VRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGV 782
+ + D E + +++ +R+ R A +D G I K M+
Sbjct: 287 MRNALD-------EVLRFDNILRIGTVRF------ARQDLEYCGASIKKGEMVFLLIPSA 333
Query: 783 LMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAG 819
L D + P+VF R L +G G
Sbjct: 334 LRDGTVFSRPDVFDVRR---------DTSASLAYGRG 361
Score = 46.5 bits (111), Expect = 2e-05
Identities = 29/169 (17%), Positives = 53/169 (31%), Gaps = 55/169 (32%)
Query: 343 EDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFYLNRYLTSSMYT---- 398
E S +L+A+ + AG++TT L + ++
Sbjct: 233 EADGSRLSTKELVALVGAIIAAGTDTTIYL-------------------IAFAVLNLLRS 273
Query: 399 -------RSRRSLVQTLPYLEAIT----YES-VRVFMGRTFSIPHRALRDTTLQGYFIPK 446
++ L++ A+ +++ +R+ R A +D G I K
Sbjct: 274 PEALELVKAEPGLMRN-----ALDEVLRFDNILRIGTVRF------ARQDLEYCGASIKK 322
Query: 447 DTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAGP 495
M+ L D + P+VF R L +G GP
Sbjct: 323 GEMVFLLIPSALRDGTVFSRPDVFDVRR---------DTSASLAYGRGP 362
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase,
metal-binding, oxidoreductase, hypothetical protein;
HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB:
2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Length = 414
Score = 62.3 bits (152), Expect = 3e-10
Identities = 31/162 (19%), Positives = 48/162 (29%), Gaps = 39/162 (24%)
Query: 664 EDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDR 723
DT +LA M G++T + LG L PD ++ + +
Sbjct: 229 GADGDTAGTLSILAFTFTMVTGGNDTVTGMLGGSMPLLHRRPDQRRLLLDD------PEG 282
Query: 724 LPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMII-----AN 778
+P + E + S + RT RD T+ IP ++ AN
Sbjct: 283 IPDAVE-------ELLRLTSPVQGLART------TTRDVTIGDTTIPAGRRVLLLYGSAN 329
Query: 779 FNGVLMDKE-FWHDPEVFRPERFLNDKGAIQVPDQYLPFGAG 819
D+ + D R P L F G
Sbjct: 330 R-----DERQYGPDAAELDVTR---------CPRNILTFSHG 357
Score = 43.4 bits (103), Expect = 2e-04
Identities = 29/174 (16%), Positives = 41/174 (23%), Gaps = 65/174 (37%)
Query: 343 EDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFYLNRYLTSSMYT---- 398
DT +LA M G++T T + L SM
Sbjct: 229 GADGDTAGTLSILAFTFTMVTGGNDTVTGM-------------------LGGSMPLLHRR 269
Query: 399 -------RSRRSLVQTLPYLEAIT----YESVRVFMGRTFSIPHRALRDTTLQGYFIPKD 447
+ A+ S + RT RD T+ IP
Sbjct: 270 PDQRRLLLDDPEGIPD-----AVEELLRLTSPVQGLART------TTRDVTIGDTTIPAG 318
Query: 448 TMII-----ANFNGVLMDKE-FWHDPEVFRPERFLNDKGAIQVPDQYLPFGAGP 495
++ AN D+ + D R P L F G
Sbjct: 319 RRVLLLYGSANR-----DERQYGPDAAELDVTR---------CPRNILTFSHGA 358
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding,
oxidoreductase, omega-hydroxylation, iron, heme, fatty
acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium
tuberculosis} PDB: 2wm4_A*
Length = 435
Score = 62.0 bits (151), Expect = 3e-10
Identities = 28/144 (19%), Positives = 54/144 (37%), Gaps = 35/144 (24%)
Query: 663 SEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRD 722
+E + S ++ + + + +AG+ETT ++ G L L +P+ + + ++ D
Sbjct: 252 AEVDGERLSSREIASFFILLVVAGNETTRNAITHGVLALSRYPEQRDRWWSDFDG----- 306
Query: 723 RLPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMII-----A 777
P+ + E + + S V+M RT +D L+G + + A
Sbjct: 307 LAPTAVE-------EIVRWASPVVYMRRT------LTQDIELRGTKMAAGDKVSLWYCSA 353
Query: 778 NFNGVLMDKEFWHDPEVF-RPERF 800
N D F P F
Sbjct: 354 N-----------RDESKFADPWTF 366
Score = 42.7 bits (101), Expect = 4e-04
Identities = 25/151 (16%), Positives = 43/151 (28%), Gaps = 53/151 (35%)
Query: 342 SEDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFYLNRYLTSSMYT--- 398
+E + S ++ + + + +AG+ETT +T +
Sbjct: 252 AEVDGERLSSREIASFFILLVVAGNETTRNA-------------------ITHGVLALSR 292
Query: 399 --RSRRSLVQTLPYL------EAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMI 450
R L E + + S V+M RT +D L+G + +
Sbjct: 293 YPEQRDRWWSDFDGLAPTAVEEIVRWASPVVYMRRT------LTQDIELRGTKMAAGDKV 346
Query: 451 I-----ANFNGVLMDKEFWHDPEVF-RPERF 475
AN D F P F
Sbjct: 347 SLWYCSAN-----------RDESKFADPWTF 366
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E
oxidoreductase; HET: HEM; 2.20A {Novosphingobium
aromaticivorans}
Length = 450
Score = 62.0 bits (151), Expect = 4e-10
Identities = 34/144 (23%), Positives = 51/144 (35%), Gaps = 36/144 (25%)
Query: 663 SEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRD 722
+ + S+ + AG +TTS S L L PD+ + +A+ R+
Sbjct: 267 AVVDGEPMSDRDTAGYYIITASAGHDTTSASSAGAALALARDPDLFARVKAD------RN 320
Query: 723 RLPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMII-----A 777
LP + + EAI + + RT A DT L G I ++ A
Sbjct: 321 LLPGIVE-------EAIRWTTPVQHFMRT------AATDTELCGQKIAAGDWLMLNYVAA 367
Query: 778 NFNGVLMDKEFWHDPEVF-RPERF 800
N HDP F P +F
Sbjct: 368 N-----------HDPAQFPEPRKF 380
Score = 41.2 bits (97), Expect = 0.001
Identities = 31/171 (18%), Positives = 52/171 (30%), Gaps = 58/171 (33%)
Query: 342 SEDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFYLNRYLTSSMYT--- 398
+ + S+ + AG +TT+ +
Sbjct: 267 AVVDGEPMSDRDTAGYYIITASAGHDTTSAS-------------------SAGAALALAR 307
Query: 399 --------RSRRSLVQTLPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMI 450
++ R+L+ + EAI + + RT A DT L G I +
Sbjct: 308 DPDLFARVKADRNLLPGIVE-EAIRWTTPVQHFMRT------AATDTELCGQKIAAGDWL 360
Query: 451 I-----ANFNGVLMDKEFWHDPEVF-RPERFLNDKGAIQVPDQYLPFGAGP 495
+ AN HDP F P +F + +++L FGAG
Sbjct: 361 MLNYVAAN-----------HDPAQFPEPRKFDPTRP----ANRHLAFGAGS 396
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX,
bioremediation, electron transport; HET: HEM; 1.49A
{Rhodococcus} PDB: 2wiv_A*
Length = 394
Score = 61.1 bits (149), Expect = 5e-10
Identities = 27/155 (17%), Positives = 47/155 (30%), Gaps = 38/155 (24%)
Query: 671 SESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDRLPSLNDR 730
+ES+ +A + + G + G P+V + + ++ +
Sbjct: 219 TESEAIATILVFYAVGHMAIGYLIASGIELFARRPEVFTAFRND------ESARAAIIN- 271
Query: 731 PHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMII-----ANFNGVLMD 785
E + + ++ R D + G I + I AN
Sbjct: 272 ------EMVRMDPPQLSFLRF------PTEDVEIGGVLIEAGSPIRFMIGAAN------- 312
Query: 786 KEFWHDPEVF-RPERFLNDKGAIQVPDQYLPFGAG 819
DPEVF P+ F D + L FG G
Sbjct: 313 ----RDPEVFDDPDVF--DHTRPPAASRNLSFGLG 341
Score = 43.4 bits (103), Expect = 2e-04
Identities = 29/167 (17%), Positives = 44/167 (26%), Gaps = 64/167 (38%)
Query: 350 SESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFYLNRYLTSSMYT----------- 398
+ES+ +A + + G L + S +
Sbjct: 219 TESEAIATILVFYAVGHMAIGYL-------------------IASGIELFARRPEVFTAF 259
Query: 399 RSRRSLVQTLPYLEAIT----YESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMII--- 451
R+ S I + ++ R D + G I + I
Sbjct: 260 RNDESARAA-----IINEMVRMDPPQLSFLRF------PTEDVEIGGVLIEAGSPIRFMI 308
Query: 452 --ANFNGVLMDKEFWHDPEVF-RPERFLNDKGAIQVPDQYLPFGAGP 495
AN DPEVF P+ F D + L FG GP
Sbjct: 309 GAAN-----------RDPEVFDDPDVF--DHTRPPAASRNLSFGLGP 342
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase,
oxidoreductase; HET: HEM; 2.00A {Sphingopyxis
macrogoltabida}
Length = 426
Score = 60.7 bits (148), Expect = 8e-10
Identities = 63/366 (17%), Positives = 113/366 (30%), Gaps = 84/366 (22%)
Query: 466 DPEVFRPERFLNDKGAIQVPDQYLPFGAGPDRLLVTDEQLWVEQRRFVLRQLREFGFGKR 525
+ ++F + + G + D EQR+ V
Sbjct: 79 NHDIFSSDAGYGGIIIDDGIQKGGDGGLDLPNFIAMDRPRHDEQRKAVSP-----IVAPA 133
Query: 526 TMAQL---VEEEAYQLVQLFKQEVQDGGAIIPMRD---AFSVPV-LNTLWSMLAGIRYSP 578
+A L + E + + + G D S+ + L ++ P
Sbjct: 134 NLAALEGTIRERVSKTLD----GLPVGEEF----DWVDRVSIEITTQMLATLF-DF---P 181
Query: 579 EDKELKKIQSLLTELFANIDMVGALFSQFPILRYVAPEMSGYKSFVSIHQKVWKFLRNEL 638
+ E +K+ A G + + + E + Y L
Sbjct: 182 FE-ERRKLTRWSDVTTAAPG--GGVVESWDQRKTELLECAAY--------------FQVL 224
Query: 639 DNHKETFNPDEMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGF 698
N + +P D++ + L T + + L + + + G++TT S+ G
Sbjct: 225 WNERVNKDPGN--DLISM----LAHSPATRNMTPEEYLGNVLLLIVGGNDTTRNSMTGGV 278
Query: 699 LYLLLHPDVQKKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRA 758
L L +PD K +A + ++ E I +++ M RT A
Sbjct: 279 LALHKNPDQFAKLKAN------PALVETMVP-------EIIRWQTPLAHMRRT------A 319
Query: 759 LRDTTLQGYFIPKDTMII-----ANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQY 813
+ D+ L G I K ++ N D E PE F +R P Q+
Sbjct: 320 IADSELGGKTIRKGDKVVMWYYSGNR-----DDEVIDRPEEFIIDR--------PRPRQH 366
Query: 814 LPFGAG 819
L FG G
Sbjct: 367 LSFGFG 372
Score = 41.1 bits (97), Expect = 0.001
Identities = 32/162 (19%), Positives = 55/162 (33%), Gaps = 55/162 (33%)
Query: 350 SESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFYLNRYLTSSMYT----------- 398
+ + L + + + G++TT +T +
Sbjct: 251 TPEEYLGNVLLLIVGGNDTTRNS-------------------MTGGVLALHKNPDQFAKL 291
Query: 399 RSRRSLVQTLPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMII-----AN 453
++ +LV+T+ E I +++ M RT A+ D+ L G I K ++ N
Sbjct: 292 KANPALVETMVP-EIIRWQTPLAHMRRT------AIADSELGGKTIRKGDKVVMWYYSGN 344
Query: 454 FNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAGP 495
D E PE F +R P Q+L FG G
Sbjct: 345 R-----DDEVIDRPEEFIIDR--------PRPRQHLSFGFGI 373
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron,
metal-binding, oxidoreductase; HET: HEM; 1.35A
{Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A*
3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Length = 433
Score = 60.8 bits (148), Expect = 9e-10
Identities = 34/144 (23%), Positives = 54/144 (37%), Gaps = 38/144 (26%)
Query: 663 SEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRD 722
++ + S+ + + + +AG+ETT S+ G + HPD Q E+ + +
Sbjct: 246 ADIDGEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPD-----QWELYK---KV 297
Query: 723 RLPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMII-----A 777
R + D E + + + RT ALRD L G I K ++ A
Sbjct: 298 RPETAAD-------EIVRWATPVTAFQRT------ALRDYELSGVQIKKGQRVVMFYRSA 344
Query: 778 NFNGVLMDKEFWHDPEVF-RPERF 800
N D EVF P F
Sbjct: 345 N-----------FDEEVFQDPFTF 357
Score = 37.3 bits (87), Expect = 0.019
Identities = 28/148 (18%), Positives = 45/148 (30%), Gaps = 50/148 (33%)
Query: 342 SEDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFYLNRYLTSSMYTRSR 401
++ + S+ + + + +AG+ETT +T M +
Sbjct: 246 ADIDGEKLSDDEFGFFVVMLAVAGNETTRNS-------------------ITQGMMAFAE 286
Query: 402 -----RSLVQTLPYL---EAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMII-- 451
+ P E + + + RT ALRD L G I K ++
Sbjct: 287 HPDQWELYKKVRPETAADEIVRWATPVTAFQRT------ALRDYELSGVQIKKGQRVVMF 340
Query: 452 ---ANFNGVLMDKEFWHDPEVF-RPERF 475
AN D EVF P F
Sbjct: 341 YRSAN-----------FDEEVFQDPFTF 357
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein
complex, cytochrome P450 fold, carrier protein, 4-helix
bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus
subtilis} PDB: 3ejd_B* 3eje_B*
Length = 404
Score = 60.3 bits (147), Expect = 1e-09
Identities = 34/152 (22%), Positives = 55/152 (36%), Gaps = 28/152 (18%)
Query: 668 DTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDRLPSL 727
D +E + + C+ + +AG ETT + L LL HP+ K + D + +
Sbjct: 217 DKLTEEEAASTCILLAIAGHETTVNLISNSVLCLLQHPEQLLKLREN------PDLIGTA 270
Query: 728 NDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKE 787
+ E + YES R A D + G I + + D
Sbjct: 271 VE-------ECLRYESPTQMTARV------ASEDIDICGVTIRQGEQVYLLLGAANRDPS 317
Query: 788 FWHDPEVFRPERFLNDKGAIQVPDQYLPFGAG 819
+ +P+VF R P+ +L FG G
Sbjct: 318 IFTNPDVFDITR---------SPNPHLSFGHG 340
Score = 44.5 bits (106), Expect = 1e-04
Identities = 32/164 (19%), Positives = 52/164 (31%), Gaps = 54/164 (32%)
Query: 347 DTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFYLNRYLTSSMYT-------- 398
D +E + + C+ + +AG ETT L +++S+
Sbjct: 217 DKLTEEEAASTCILLAIAGHETTVNL-------------------ISNSVLCLLQHPEQL 257
Query: 399 ---RSRRSLVQTLPYLEAIT----YESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMII 451
R L+ T A+ YES R A D + G I + +
Sbjct: 258 LKLRENPDLIGT-----AVEECLRYESPTQMTARV------ASEDIDICGVTIRQGEQVY 306
Query: 452 ANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAGP 495
D + +P+VF R P+ +L FG G
Sbjct: 307 LLLGAANRDPSIFTNPDVFDITR---------SPNPHLSFGHGH 341
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme,
oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB:
2z3u_A* 3a1l_A*
Length = 425
Score = 60.4 bits (147), Expect = 1e-09
Identities = 29/143 (20%), Positives = 48/143 (33%), Gaps = 36/143 (25%)
Query: 664 EDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDR 723
D S ++ C+ + AG ETT+ L L L H DV + + +
Sbjct: 233 RDTGSPLSVDGIVGTCVHLLTAGHETTTNFLAKAVLTLRAHRDVLDELRTT------PES 286
Query: 724 LPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMII-----AN 778
P+ + E + Y+ + R A D L + IP+ + ++ AN
Sbjct: 287 TPAAVE-------ELMRYDPPVQAVTRW------AYEDIRLGDHDIPRGSRVVALLGSAN 333
Query: 779 FNGVLMDKEFWHDPEVF-RPERF 800
DP F P+
Sbjct: 334 -----------RDPARFPDPDVL 345
Score = 44.6 bits (106), Expect = 1e-04
Identities = 29/174 (16%), Positives = 49/174 (28%), Gaps = 66/174 (37%)
Query: 343 EDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFYLNRYLTSSMYT---- 398
D S ++ C+ + AG ETTT L ++ T
Sbjct: 233 RDTGSPLSVDGIVGTCVHLLTAGHETTTNF-------------------LAKAVLTLRAH 273
Query: 399 -------RSRRSLVQTLPYLEAIT----YESVRVFMGRTFSIPHRALRDTTLQGYFIPKD 447
R+ A+ Y+ + R A D L + IP+
Sbjct: 274 RDVLDELRTTPESTPA-----AVEELMRYDPPVQAVTRW------AYEDIRLGDHDIPRG 322
Query: 448 TMII-----ANFNGVLMDKEFWHDPEVF-RPERFLNDKGAIQVPDQYLPFGAGP 495
+ ++ AN DP F P+ + ++ + FG G
Sbjct: 323 SRVVALLGSAN-----------RDPARFPDPDVLDVHRA----AERQVGFGLGI 361
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken
structural genomics/proteomics initiative, RSGI,
structural genomics; HET: HEM; 1.50A {Sulfolobus
solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A*
1io9_A* 1io8_A*
Length = 368
Score = 59.9 bits (146), Expect = 1e-09
Identities = 29/158 (18%), Positives = 52/158 (32%), Gaps = 40/158 (25%)
Query: 667 TDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDRLPS 726
S+ + L + + +AG+ETT+ + + Q+ + +
Sbjct: 191 NSNLSDIEKLGYIILLLIAGNETTTNLISNSVIDFTRFNLWQRIRE--------ENLYLK 242
Query: 727 LNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMII-----ANFNG 781
+ EA+ Y + R L I + + AN
Sbjct: 243 AIE-------EALRYSPPVMRTVRK------TKERVKLGDQTIEEGEYVRVWIASANR-- 287
Query: 782 VLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAG 819
D+E +HD E F P+R P+ +L FG+G
Sbjct: 288 ---DEEVFHDGEKFIPDRN---------PNPHLSFGSG 313
Score = 43.0 bits (102), Expect = 3e-04
Identities = 35/163 (21%), Positives = 58/163 (35%), Gaps = 52/163 (31%)
Query: 346 TDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFYLNRYLTSSMYTRSRRSLV 405
S+ + L + + +AG+ETTT L +++S+ +R +L
Sbjct: 191 NSNLSDIEKLGYIILLLIAGNETTTNL-------------------ISNSVIDFTRFNLW 231
Query: 406 QTL--PYL------EAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMII-----A 452
Q + L EA+ Y + R L I + + A
Sbjct: 232 QRIREENLYLKAIEEALRYSPPVMRTVRK------TKERVKLGDQTIEEGEYVRVWIASA 285
Query: 453 NFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAGP 495
N D+E +HD E F P+R P+ +L FG+G
Sbjct: 286 NR-----DEEVFHDGEKFIPDRN---------PNPHLSFGSGI 314
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein,
vancomycin biosynthes carrier protein, oxidoreductase;
HET: HEM; 2.10A {Amycolatopsis balhimycina}
Length = 415
Score = 60.0 bits (146), Expect = 1e-09
Identities = 28/154 (18%), Positives = 56/154 (36%), Gaps = 38/154 (24%)
Query: 671 SESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDRLPSLNDR 730
+ +L C ++ + G+ETT ++ L P + + + ++ +
Sbjct: 240 TIDDVLLNCDNVLIGGNETTRHAITGAVHALATVPGLLTALRDG------SADVDTVVE- 292
Query: 731 PHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMII-----ANFNGVLMD 785
E + + S + + R D T+ G +P T ++ AN D
Sbjct: 293 ------EVLRWTSPAMHVLRV------TTADVTINGRDLPSGTPVVAWLPAANR-----D 335
Query: 786 KEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAG 819
+ DP+ F P R P++++ FG G
Sbjct: 336 PAEFDDPDTFLPGR---------KPNRHITFGHG 360
Score = 41.1 bits (97), Expect = 0.001
Identities = 30/162 (18%), Positives = 56/162 (34%), Gaps = 56/162 (34%)
Query: 350 SESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFYLNRYLTSSMYT----------- 398
+ +L C ++ + G+ETT +T +++
Sbjct: 240 TIDDVLLNCDNVLIGGNETTRHA-------------------ITGAVHALATVPGLLTAL 280
Query: 399 RSRRSLVQTLPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMII-----AN 453
R + V T+ E + + S + + R D T+ G +P T ++ AN
Sbjct: 281 RDGSADVDTVVE-EVLRWTSPAMHVLRV------TTADVTINGRDLPSGTPVVAWLPAAN 333
Query: 454 FNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAGP 495
D + DP+ F P R P++++ FG G
Sbjct: 334 R-----DPAEFDDPDTFLPGR---------KPNRHITFGHGM 361
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A
{Pseudomonas SP} SCOP: a.104.1.1
Length = 428
Score = 60.0 bits (146), Expect = 1e-09
Identities = 34/144 (23%), Positives = 56/144 (38%), Gaps = 36/144 (25%)
Query: 663 SEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRD 722
S+ + + + A + + AG +TTS S G + L +P+ A+++
Sbjct: 245 SKLDGNYIDDKYINAYYVAIATAGHDTTSSSSGGAIIGLSRNPEQLALAKSD------PA 298
Query: 723 RLPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMII-----A 777
+P L D EA+ + + RT AL DT ++G I + I+ A
Sbjct: 299 LIPRLVD-------EAVRWTAPVKSFMRT------ALADTEVRGQNIKRGDRIMLSYPSA 345
Query: 778 NFNGVLMDKEFWHDPEVF-RPERF 800
N D EVF P+ F
Sbjct: 346 N-----------RDEEVFSNPDEF 358
Score = 40.0 bits (94), Expect = 0.003
Identities = 33/171 (19%), Positives = 59/171 (34%), Gaps = 58/171 (33%)
Query: 342 SEDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFYLNRYLTSSMYT--- 398
S+ + + + A + + AG +TT++ ++
Sbjct: 245 SKLDGNYIDDKYINAYYVAIATAGHDTTSSS-------------------SGGAIIGLSR 285
Query: 399 --------RSRRSLVQTLPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMI 450
+S +L+ L EA+ + + RT AL DT ++G I + I
Sbjct: 286 NPEQLALAKSDPALIPRLVD-EAVRWTAPVKSFMRT------ALADTEVRGQNIKRGDRI 338
Query: 451 I-----ANFNGVLMDKEFWHDPEVF-RPERFLNDKGAIQVPDQYLPFGAGP 495
+ AN D EVF P+ F + P+++L FG G
Sbjct: 339 MLSYPSAN-----------RDEEVFSNPDEFDITRF----PNRHLGFGWGA 374
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis;
HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB:
2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Length = 417
Score = 59.2 bits (144), Expect = 3e-09
Identities = 33/156 (21%), Positives = 65/156 (41%), Gaps = 26/156 (16%)
Query: 664 EDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDR 723
D+ D+ SE +LL + + + +AG E+T+ + L+ P+++++ +
Sbjct: 233 RDQQDSLSEQELLDLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQLLDR------PEL 286
Query: 724 LPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVL 783
+PS + E + + V P A+ D TL+G I ++A+
Sbjct: 287 IPSAVE-------ELTRWVPLGVGTA----FPRYAVEDVTLRGVTIRAGEPVLASTGAAN 335
Query: 784 MDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAG 819
D+ + D + +R P+Q+L FG G
Sbjct: 336 RDQAQFPDADRIDVDR---------TPNQHLGFGHG 362
Score = 43.0 bits (102), Expect = 3e-04
Identities = 35/163 (21%), Positives = 59/163 (36%), Gaps = 42/163 (25%)
Query: 343 EDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFYLNRYLTSSMYT---- 398
D+ D+ SE +LL + + + +AG E+TTT + +Y
Sbjct: 233 RDQQDSLSEQELLDLAIGLLVAGYESTTTQ-------------------IADFVYLLMTR 273
Query: 399 RSRRSLVQTLPYL------EAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIA 452
R + P L E + + V P A+ D TL+G I ++A
Sbjct: 274 PELRRQLLDRPELIPSAVEELTRWVPLGVGTA----FPRYAVEDVTLRGVTIRAGEPVLA 329
Query: 453 NFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAGP 495
+ D+ + D + +R P+Q+L FG G
Sbjct: 330 STGAANRDQAQFPDADRIDVDR---------TPNQHLGFGHGV 363
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta
binding protein; HET: HEM; 2.47A {Micromonospora
echinospora}
Length = 397
Score = 58.8 bits (143), Expect = 3e-09
Identities = 27/139 (19%), Positives = 47/139 (33%), Gaps = 36/139 (25%)
Query: 668 DTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDRLPSL 727
S +++++ + G ET + +G L LL HPD + D L
Sbjct: 216 GLMSRNEIVSTVVTFIFTGHETVASQVGNAVLSLLAHPDQLDLLRRR------PDLLAQA 269
Query: 728 NDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMII-----ANFNGV 782
+ E + Y+ R D L+G + +D +++ AN
Sbjct: 270 VE-------ECLRYDPSVQSNTRQ------LDVDVELRGRRLRRDDVVVVLAGAAN---- 312
Query: 783 LMDKEFWHDPEVF-RPERF 800
DP + RP+ F
Sbjct: 313 -------RDPRRYDRPDDF 324
Score = 43.4 bits (103), Expect = 2e-04
Identities = 24/164 (14%), Positives = 48/164 (29%), Gaps = 54/164 (32%)
Query: 347 DTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFYLNRYLTSSMYT-------- 398
S +++++ + G ET + + +++ +
Sbjct: 216 GLMSRNEIVSTVVTFIFTGHETVASQ-------------------VGNAVLSLLAHPDQL 256
Query: 399 ---RSRRSLVQTLPYLEAIT----YESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMII 451
R R L+ A+ Y+ R D L+G + +D +++
Sbjct: 257 DLLRRRPDLLAQ-----AVEECLRYDPSVQSNTRQ------LDVDVELRGRRLRRDDVVV 305
Query: 452 ANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAGP 495
D + P+ F ER P + FGAG
Sbjct: 306 VLAGAANRDPRRYDRPDDFDIER---------DPVPSMSFGAGM 340
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR,
atomic resolutio structural genomics/proteomics
initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum}
SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A*
1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A*
1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Length = 404
Score = 58.0 bits (141), Expect = 6e-09
Identities = 34/163 (20%), Positives = 52/163 (31%), Gaps = 39/163 (23%)
Query: 664 EDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDR 723
+ K +S + I + +AG+ T + G L HPD + +A
Sbjct: 219 QVKPGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKAN------PSL 272
Query: 724 LPSLNDRPHMPYLEAITYES-VRVFMGRTFSIPHRALRDTTLQGYFIPKDTMII-----A 777
P + E Y + + + RT A D + + + II A
Sbjct: 273 APQFVE-------ELCRYHTASALAIKRT------AKEDVMIGDKLVRANEGIIASNQSA 319
Query: 778 NFNGVLMDKEFWHDPEVF-RPERFLNDKGAIQVPDQYLPFGAG 819
N D EVF P+ F + P L FG G
Sbjct: 320 N-----------RDEEVFENPDEF--NMNRKWPPQDPLGFGFG 349
Score = 42.6 bits (101), Expect = 4e-04
Identities = 29/175 (16%), Positives = 45/175 (25%), Gaps = 65/175 (37%)
Query: 343 EDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFYLNRYLTSSMYT---- 398
+ K +S + I + +AG+ T + + + T
Sbjct: 219 QVKPGNIDKSDAVQIAFLLLVAGNATMVNM-------------------IALGVATLAQH 259
Query: 399 -------RSRRSLVQT-----LPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPK 446
++ SL Y A R A D + +
Sbjct: 260 PDQLAQLKANPSLAPQFVEELCRYHTASALAIKRT-----------AKEDVMIGDKLVRA 308
Query: 447 DTMII-----ANFNGVLMDKEFWHDPEVF-RPERFLNDKGAIQVPDQYLPFGAGP 495
+ II AN D EVF P+ F + P L FG G
Sbjct: 309 NEGIIASNQSAN-----------RDEEVFENPDEF--NMNRKWPPQDPLGFGFGD 350
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450
fold, structural genomics, PSI, protein structure
initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis}
SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A*
3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Length = 396
Score = 57.6 bits (140), Expect = 8e-09
Identities = 30/162 (18%), Positives = 55/162 (33%), Gaps = 26/162 (16%)
Query: 658 LKTLKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDR 717
L L+ + S+ I + F AG +T L + L+ P
Sbjct: 206 LSRLRKDPAYSHVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRP------------ 253
Query: 718 VVGRDRLPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIA 777
L+++P + + A E +R+ + +P A D + + K +++
Sbjct: 254 ----QLRNLLHEKPEL--IPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLV 307
Query: 778 NFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAG 819
G D E + +P +R P +L FG G
Sbjct: 308 LLEGANFDPEHFPNPGSIELDR--------PNPTSHLAFGRG 341
Score = 43.0 bits (102), Expect = 3e-04
Identities = 27/170 (15%), Positives = 53/170 (31%), Gaps = 44/170 (25%)
Query: 337 LKTLKSEDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFYLNRYLTSSM 396
L L+ + S+ I + F AG +T + LT+++
Sbjct: 206 LSRLRKDPAYSHVSDELFATIGVTFFGAGVISTGSF-------------------LTTAL 246
Query: 397 YT-----------RSRRSLVQTLPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIP 445
+ + L+ + E +R+ + +P A D + +
Sbjct: 247 ISLIQRPQLRNLLHEKPELIPA-----GV-EELLRINLSFADGLPRLATADIQVGDVLVR 300
Query: 446 KDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAGP 495
K +++ G D E + +P +R P +L FG G
Sbjct: 301 KGELVLVLLEGANFDPEHFPNPGSIELDR--------PNPTSHLAFGRGQ 342
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme,
monooxygenase, macrolide, filipi metal-binding; HET:
HEM; 2.30A {Streptomyces avermitilis}
Length = 408
Score = 57.2 bits (139), Expect = 1e-08
Identities = 23/143 (16%), Positives = 48/143 (33%), Gaps = 36/143 (25%)
Query: 664 EDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDR 723
+ + +++ I + + +AG ETT ++ G L L+ HP+ +
Sbjct: 222 QLEEGDLDHDEVVMIALVLLVAGHETTVNAIALGALTLIQHPEQIDVLLRD------PGA 275
Query: 724 LPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMII-----AN 778
+ + + E + + SV + R A D + G I ++ N
Sbjct: 276 VSGVVE-------ELLRFTSVSDHIVRM------AKEDIEVGGATIKAGDAVLVSITLMN 322
Query: 779 FNGVLMDKEFWHDPEVF-RPERF 800
D + + P+ F
Sbjct: 323 -----------RDAKAYENPDIF 334
Score = 41.1 bits (97), Expect = 0.001
Identities = 23/169 (13%), Positives = 47/169 (27%), Gaps = 56/169 (33%)
Query: 343 EDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFYLNRYLTSSMYT---- 398
+ + +++ I + + +AG ETT + T
Sbjct: 222 QLEEGDLDHDEVVMIALVLLVAGHETTVNA-------------------IALGALTLIQH 262
Query: 399 RSRRSLVQTLPYL------EAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMII- 451
+ ++ P E + + SV + R A D + G I ++
Sbjct: 263 PEQIDVLLRDPGAVSGVVEELLRFTSVSDHIVRM------AKEDIEVGGATIKAGDAVLV 316
Query: 452 ----ANFNGVLMDKEFWHDPEVF-RPERFLNDKGAIQVPDQYLPFGAGP 495
N D + + P+ F + ++ FG G
Sbjct: 317 SITLMN-----------RDAKAYENPDIFDARRN----ARHHVGFGHGI 350
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A
{Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Length = 416
Score = 56.9 bits (138), Expect = 1e-08
Identities = 28/140 (20%), Positives = 44/140 (31%), Gaps = 37/140 (26%)
Query: 668 DTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDRLPSL 727
+ +L + + +AG ETT+ L HPD K + + P
Sbjct: 236 GVLDDYELRTLVATVLVAGYETTNHQLALAMYDFAQHPDQWMKIKEN------PELAPQA 289
Query: 728 NDRPHMPYLEAITYES-VRVFMGRTFSIPHRALRDTTLQGYFIPKDTMII-----ANFNG 781
+ E + + + V R A D + G IP T + A+
Sbjct: 290 VE-------EVLRWSPTLPVTATRV------AAEDFEVNGVRIPTGTPVFMCAHVAH--- 333
Query: 782 VLMDKEFWHDPEVF-RPERF 800
DP VF +RF
Sbjct: 334 --------RDPRVFADADRF 345
Score = 41.5 bits (98), Expect = 0.001
Identities = 31/171 (18%), Positives = 47/171 (27%), Gaps = 66/171 (38%)
Query: 347 DTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFYLNRYLTSSMYT-------- 398
+ +L + + +AG ETT L +MY
Sbjct: 236 GVLDDYELRTLVATVLVAGYETTNHQ-------------------LALAMYDFAQHPDQW 276
Query: 399 ---RSRRSLVQTLPYLEAIT----YES-VRVFMGRTFSIPHRALRDTTLQGYFIPKDTMI 450
+ L A+ + + V R A D + G IP T +
Sbjct: 277 MKIKENPELAPQ-----AVEEVLRWSPTLPVTATRV------AAEDFEVNGVRIPTGTPV 325
Query: 451 I-----ANFNGVLMDKEFWHDPEVF-RPERFLNDKGAIQVPDQYLPFGAGP 495
A+ DP VF +RF D + + FG GP
Sbjct: 326 FMCAHVAH-----------RDPRVFADADRF--DITV-KREAPSIAFGGGP 362
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin,
oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora
erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A*
1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Length = 404
Score = 56.1 bits (136), Expect = 2e-08
Identities = 31/143 (21%), Positives = 52/143 (36%), Gaps = 36/143 (25%)
Query: 664 EDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDR 723
+D S +L +I + + +AG E + +G G LL HPD + +
Sbjct: 220 DDDDGRLSADELTSIALVLLLAGFEASVSLIGIGTYLLLTHPDQLALVRRD------PSA 273
Query: 724 LPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMII-----AN 778
LP+ + E + Y + R A + + G IP+ + ++ AN
Sbjct: 274 LPNAVE-------EILRYIAPPETTTRF------AAEEVEIGGVAIPQYSTVLVANGAAN 320
Query: 779 FNGVLMDKEFWHDPEVF-RPERF 800
DP+ F P RF
Sbjct: 321 -----------RDPKQFPDPHRF 332
Score = 41.8 bits (99), Expect = 8e-04
Identities = 27/168 (16%), Positives = 48/168 (28%), Gaps = 54/168 (32%)
Query: 343 EDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFYLNRYLTSSMYT---- 398
+D S +L +I + + +AG E + +L + Y
Sbjct: 220 DDDDGRLSADELTSIALVLLLAGFEASVSL-------------------IGIGTYLLLTH 260
Query: 399 -------RSRRSLVQTLPYLEAIT----YESVRVFMGRTFSIPHRALRDTTLQGYFIPKD 447
R S + A+ Y + R A + + G IP+
Sbjct: 261 PDQLALVRRDPSALPN-----AVEEILRYIAPPETTTRF------AAEEVEIGGVAIPQY 309
Query: 448 TMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAGP 495
+ ++ D + + DP F R +L FG G
Sbjct: 310 STVLVANGAANRDPKQFPDPHRFDVTR---------DTRGHLSFGQGI 348
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide
monooxygenase, antibiotic biosynthesis, heme, iron,
metal-binding; HET: HEM PXI; 1.7A {Streptomyces
venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A*
2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Length = 436
Score = 55.4 bits (134), Expect = 5e-08
Identities = 33/157 (21%), Positives = 50/157 (31%), Gaps = 29/157 (18%)
Query: 664 EDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDR 723
++ + +LL + + +AG ETT + G LL HPD +A+
Sbjct: 242 DEDGSRLTSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAALRAD------MTL 295
Query: 724 LPSLNDRPHMPYLEAITYES-VRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGV 782
L + E + YE V R + L G IP ++
Sbjct: 296 LDGAVE-------EMLRYEGPVESATYRF------PVEPVDLDGTVIPAGDTVLVVLADA 342
Query: 783 LMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAG 819
E + DP F R +L FG G
Sbjct: 343 HRTPERFPDPHRFDIRR---------DTAGHLAFGHG 370
Score = 40.3 bits (95), Expect = 0.002
Identities = 28/169 (16%), Positives = 47/169 (27%), Gaps = 55/169 (32%)
Query: 343 EDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFYLNRYLTSSMYT---- 398
++ + +LL + + +AG ETT L + + MY
Sbjct: 242 DEDGSRLTSEELLGMAHILLVAGHETTVNL-------------------IANGMYALLSH 282
Query: 399 -------RSRRSLVQT-----LPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPK 446
R+ +L+ L Y + + R + L G IP
Sbjct: 283 PDQLAALRADMTLLDGAVEEMLRYEGPVESATYRF-----------PVEPVDLDGTVIPA 331
Query: 447 DTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAGP 495
++ E + DP F R +L FG G
Sbjct: 332 GDTVLVVLADAHRTPERFPDPHRFDIRR---------DTAGHLAFGHGI 371
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron,
metal-binding, monooxygenase, oxidoreductase; HET: HEM;
1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Length = 367
Score = 54.9 bits (133), Expect = 5e-08
Identities = 57/382 (14%), Positives = 114/382 (29%), Gaps = 107/382 (28%)
Query: 460 DKEFW----HD--PEVFR-PERFLNDKGAIQVPDQYLPFGAGPDRLLVTDEQLWVE---- 508
D + W ++ V +RF ++ + L G + L +
Sbjct: 17 DGKVWNLFKYEDCKMVLNDHKRFSSNLTGYNDKLEMLRSGKVFFDIPTRYTMLTSDPPLH 76
Query: 509 --QRRFVLRQLREFGFGKRTMAQ-LVEEEAYQLVQLFKQE---VQDGGAIIPMRDAFSVP 562
R F + V E +L+ +E ++ +P+
Sbjct: 77 DELRNLTAD-----AFNPSNLPVDFVREVTVKLLSELDEEFDVIESFAIPLPIL------ 125
Query: 563 VLNTLWSMLAGIRYSPEDKELKKIQSLLTELFANIDMVGALFSQFPILRYVAPEMSGYKS 622
V+ S + GI D + K++ + + +FS + E+ +
Sbjct: 126 VI----SKMLGI---NPDVK--KVKDWSDLVALRLGRADEIFS----IGRKYLELISF-- 170
Query: 623 FVSIHQKVWKFLRNELDNHKETFNPDEMRDIMDVYLKTLKSEDKTDTFSESQLLAICMDM 682
+ ELD+ K D+ + SE + + +
Sbjct: 171 -----------SKKELDSRKG--KEIV--DLT--------GKIANSNLSELEKEGYFILL 207
Query: 683 FMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDRLPSLNDRPHMPYLEAITYE 742
+AG+ETT+ +G L+ + R + EA+ +
Sbjct: 208 MIAGNETTTNLIGNAIEDFTLYN------SWDYVR---EKGALKAVE-------EALRFS 251
Query: 743 SVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMII-----ANFNGVLMDKEFWHDPEVFRP 797
+ R ++ I + ++ AN D+E + DP+ F P
Sbjct: 252 PPVMRTIRV------TKEKVKIRDQVIDEGELVRVWIASANR-----DEEVFKDPDSFIP 300
Query: 798 ERFLNDKGAIQVPDQYLPFGAG 819
+R P+ +L FG+G
Sbjct: 301 DR---------TPNPHLSFGSG 313
Score = 43.3 bits (103), Expect = 2e-04
Identities = 29/168 (17%), Positives = 57/168 (33%), Gaps = 51/168 (30%)
Query: 340 LKSEDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFYLNRYLTSSMYTR 399
L + SE + + + +AG+ETTT L + +++
Sbjct: 186 LTGKIANSNLSELEKEGYFILLMIAGNETTTNL-------------------IGNAIEDF 226
Query: 400 SR---RSLVQTLPYLEAIT----YESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMII- 451
+ V+ L+A+ + + R ++ I + ++
Sbjct: 227 TLYNSWDYVREKGALKAVEEALRFSPPVMRTIRV------TKEKVKIRDQVIDEGELVRV 280
Query: 452 ----ANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAGP 495
AN D+E + DP+ F P+R P+ +L FG+G
Sbjct: 281 WIASANR-----DEEVFKDPDSFIPDR---------TPNPHLSFGSGI 314
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding,
monooxygenase, oxidoreductase; HET: HEM; 1.50A
{Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A*
3cv9_A*
Length = 412
Score = 54.9 bits (133), Expect = 6e-08
Identities = 26/143 (18%), Positives = 48/143 (33%), Gaps = 35/143 (24%)
Query: 664 EDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDR 723
+ +L++ M + +AG ETT+ + LL HP+ +A+ R
Sbjct: 223 QLANGEIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRAD------RSL 276
Query: 724 LPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMII-----AN 778
+P + E + Y ++ + A D ++G I +I AN
Sbjct: 277 VPGAVE-------ELLRYLAI-----ADIAGGRVATADIEVEGQLIRAGEGVIVVNSIAN 324
Query: 779 FNGVLMDKEFWHDPEVF-RPERF 800
D V+ P+
Sbjct: 325 -----------RDGTVYEDPDAL 336
Score = 39.5 bits (93), Expect = 0.004
Identities = 30/164 (18%), Positives = 51/164 (31%), Gaps = 45/164 (27%)
Query: 343 EDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFYLNRYLTSSMYT---- 398
+ +L++ M + +AG ETT ++ + S+ T
Sbjct: 223 QLANGEIDREELISTAMLLLIAGHETTASM-------------------TSLSVITLLDH 263
Query: 399 -------RSRRSLVQTLPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMII 451
R+ RSLV A+ E +R + A D ++G I +I
Sbjct: 264 PEQYAALRADRSLVPG-----AV-EELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVI 317
Query: 452 ANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAGP 495
+ D + DP+ R +L FG G
Sbjct: 318 VVNSIANRDGTVYEDPDALDIHR---------SARHHLAFGFGV 352
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox
oxidoreductase; HET: HEM; 1.75A {Pseudonocardia
autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Length = 411
Score = 54.6 bits (132), Expect = 8e-08
Identities = 35/144 (24%), Positives = 55/144 (38%), Gaps = 37/144 (25%)
Query: 664 EDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDR 723
++ D S+ +L+A+ M + +AG ETT +G G L LL HPD +K +
Sbjct: 215 DEDGDRLSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHPDQRKLLAED------PSL 268
Query: 724 LPSLNDRPHMPYLEAITYES-VRVFMGRTFSIPHRALRDTTLQGYFIPKDTMII-----A 777
+ S + E + ++S V R D T G IP M++ A
Sbjct: 269 ISSAVE-------EFLRFDSPVSQAPIRF------TAEDVTYSGVTIPAGEMVMLGLAAA 315
Query: 778 NFNGVLMDKEFWHDPEVF-RPERF 800
N D + P+R
Sbjct: 316 N-----------RDADWMPEPDRL 328
Score = 39.5 bits (93), Expect = 0.003
Identities = 31/164 (18%), Positives = 54/164 (32%), Gaps = 45/164 (27%)
Query: 343 EDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFYLNRYLTSSMYT---- 398
++ D S+ +L+A+ M + +AG ETT L + + +
Sbjct: 215 DEDGDRLSQEELVAMAMLLLIAGHETTVNL-------------------IGNGVLALLTH 255
Query: 399 RSRRSLVQTLPYL------EAITYES-VRVFMGRTFSIPHRALRDTTLQGYFIPKDTMII 451
+R L+ P L E + ++S V R D T G IP M++
Sbjct: 256 PDQRKLLAEDPSLISSAVEEFLRFDSPVSQAPIRF------TAEDVTYSGVTIPAGEMVM 309
Query: 452 ANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAGP 495
D ++ +P+ R + FG G
Sbjct: 310 LGLAAANRDADWMPEPDRLDITR---------DASGGVFFGHGI 344
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin
biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A
{Amycolatopsis orientalis} SCOP: a.104.1.1
Length = 406
Score = 54.2 bits (131), Expect = 1e-07
Identities = 29/143 (20%), Positives = 49/143 (34%), Gaps = 35/143 (24%)
Query: 664 EDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDR 723
D D ++ +L +C + + G ET + +GFG L LL +P +I+ +
Sbjct: 224 RDHGDNVTDEELKGLCTALILGGVETVAGMIGFGVLALLDNPG-------QIELLFES-- 274
Query: 724 LPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMII-----AN 778
P E + E VR P A++D + G I ++ AN
Sbjct: 275 -PEK--------AERVVNELVRYLSPVQAPNPRLAIKDVVIDGQLIKAGDYVLCSILMAN 325
Query: 779 FNGVLMDKEFWHDPEVF-RPERF 800
D + P+
Sbjct: 326 -----------RDEALTPDPDVL 337
Score = 39.2 bits (92), Expect = 0.004
Identities = 23/164 (14%), Positives = 43/164 (26%), Gaps = 45/164 (27%)
Query: 343 EDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFYLNRYLTSSMYT---- 398
D D ++ +L +C + + G ET + + +
Sbjct: 224 RDHGDNVTDEELKGLCTALILGGVETVAGM-------------------IGFGVLALLDN 264
Query: 399 -------RSRRSLVQTLPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMII 451
+ + E VR P A++D + G I ++
Sbjct: 265 PGQIELLFESPEKAER-----VV-NELVRYLSPVQAPNPRLAIKDVVIDGQLIKAGDYVL 318
Query: 452 ANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAGP 495
+ D+ DP+V R + FG G
Sbjct: 319 CSILMANRDEALTPDPDVLDANR---------AAVSDVGFGHGI 353
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2,
anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A
{Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A*
2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Length = 406
Score = 53.8 bits (130), Expect = 1e-07
Identities = 28/146 (19%), Positives = 52/146 (35%), Gaps = 35/146 (23%)
Query: 661 LKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVG 720
L + D + S+ + + + + + G T+ + G F LL P++ ++ ++E
Sbjct: 218 LGAAVGRDEITLSEAVGLAVLLQIGGEAVTN-NSGQMFHLLLSRPELAERLRSE------ 270
Query: 721 RDRLPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMII---- 776
+ P D E + + + AL D ++G I +
Sbjct: 271 PEIRPRAID-------ELLRWIPH----RNAVGLSRIALEDVEIKGVRIRAGDAVYVSYL 319
Query: 777 -ANFNGVLMDKEFWHDPEVF-RPERF 800
AN DPEVF P+R
Sbjct: 320 AAN-----------RDPEVFPDPDRI 334
Score = 35.3 bits (82), Expect = 0.066
Identities = 24/166 (14%), Positives = 50/166 (30%), Gaps = 43/166 (25%)
Query: 340 LKSEDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFYLNRYLTSSMYT- 398
L + D + S+ + + + + + G E T +
Sbjct: 218 LGAAVGRDEITLSEAVGLAVLLQIGG-EAVTNN-------------------SGQMFHLL 257
Query: 399 ---RSRRSLVQTLPYL------EAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTM 449
+++ P + E + + + AL D ++G I
Sbjct: 258 LSRPELAERLRSEPEIRPRAIDELLRWIPH----RNAVGLSRIALEDVEIKGVRIRAGDA 313
Query: 450 IIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAGP 495
+ ++ D E + DP+ ER P+ ++ FG GP
Sbjct: 314 VYVSYLAANRDPEVFPDPDRIDFER---------SPNPHVSFGFGP 350
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide
antibiotics, 12- and 14- carbon macrolactone
monooxygenase, heme; HET: HEM; 1.92A {Streptomyces
coelicolor} SCOP: a.104.1.1
Length = 411
Score = 53.8 bits (130), Expect = 1e-07
Identities = 21/143 (14%), Positives = 46/143 (32%), Gaps = 34/143 (23%)
Query: 664 EDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDR 723
+ D +++++++ M AG ETT + + L HP+ + + G
Sbjct: 221 SENGDHLTDAEIVSTLQLMVAAGHETTISLIVNAVVNLSTHPEQRALVLS------GEAE 274
Query: 724 LPSLNDRPHMPYLEAITYES-VRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANF--- 779
++ + E + + + + R A D + IP +I ++
Sbjct: 275 WSAVVE-------ETLRFSTPTSHVLIRF------AAEDVPVGDRVIPAGDALIVSYGAL 321
Query: 780 NGVLMDKEFWHDPEVF--RPERF 800
D +RF
Sbjct: 322 G---------RDERAHGPTADRF 335
Score = 40.7 bits (96), Expect = 0.001
Identities = 24/170 (14%), Positives = 53/170 (31%), Gaps = 55/170 (32%)
Query: 343 EDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFYLNRYLTSSMYT---- 398
+ D +++++++ M AG ETT +L + +++
Sbjct: 221 SENGDHLTDAEIVSTLQLMVAAGHETTISL-------------------IVNAVVNLSTH 261
Query: 399 -------RSRRSLVQ-----TLPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPK 446
S + TL + ++ +R A D + IP
Sbjct: 262 PEQRALVLSGEAEWSAVVEETLRFSTPTSHVLIRF-----------AAEDVPVGDRVIPA 310
Query: 447 DTMIIANFNGVLMDKE-FWHDPEVFRPERFLNDKGAIQVPDQYLPFGAGP 495
+I ++ + D+ + F R ++++ FG GP
Sbjct: 311 GDALIVSYGALGRDERAHGPTADRFDLTR--------TSGNRHISFGHGP 352
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET:
HEM; 2.90A {Streptomyces coelicolor}
Length = 417
Score = 53.8 bits (130), Expect = 1e-07
Identities = 36/156 (23%), Positives = 54/156 (34%), Gaps = 27/156 (17%)
Query: 664 EDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDR 723
+ QLL+ AG ETT+ + L LL P++ + + + D
Sbjct: 228 HLVPGNVTTEQLLSTLGITINAGRETTTSMIALSTLLLLDRPELPAELRKD------PDL 281
Query: 724 LPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVL 783
+P+ D E + SV A D L G +P D +IA G
Sbjct: 282 MPAAVD-------ELLRVLSVA-----DSIPLRVAAEDIELSGRTVPADDGVIALLAGAN 329
Query: 784 MDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAG 819
D E + DPE R + ++ FG G
Sbjct: 330 HDPEQFDDPERVDFHR---------TDNHHVAFGYG 356
Score = 40.7 bits (96), Expect = 0.002
Identities = 34/169 (20%), Positives = 47/169 (27%), Gaps = 55/169 (32%)
Query: 343 EDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFYLNRYLTSSMYT---- 398
+ QLL+ AG ETTT++ + S
Sbjct: 228 HLVPGNVTTEQLLSTLGITINAGRETTTSM-------------------IALSTLLLLDR 268
Query: 399 -------RSRRSLVQT-----LPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPK 446
R L+ L L +RV A D L G +P
Sbjct: 269 PELPAELRKDPDLMPAAVDELLRVLSVADSIPLRV-----------AAEDIELSGRTVPA 317
Query: 447 DTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAGP 495
D +IA G D E + DPE R + ++ FG G
Sbjct: 318 DDGVIALLAGANHDPEQFDDPERVDFHR---------TDNHHVAFGYGV 357
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide,
filipi metal-binding, oxidoreductase-antibiotic complex;
HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB:
3e5j_A* 3e5k_A* 3e5l_A*
Length = 403
Score = 53.8 bits (130), Expect = 1e-07
Identities = 34/157 (21%), Positives = 54/157 (34%), Gaps = 29/157 (18%)
Query: 664 EDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDR 723
ED + L+ + +A +TT+ +G G LL PD + +
Sbjct: 216 EDPDGVVDDMFLMNAAGTLLIAAHDTTACMIGLGTALLLDSPDQLALLRED------PSL 269
Query: 724 LPSLNDRPHMPYLEAITYES-VRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGV 782
+ + + E + Y + + R A RD L G I K ++A+
Sbjct: 270 VGNAVE-------ELLRYLTIGQFGGERV------ATRDVELGGVRIAKGEQVVAHVLAA 316
Query: 783 LMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAG 819
D F +PE F R P +L FG G
Sbjct: 317 DFDPAFVEEPERFDITR---------RPAPHLAFGFG 344
Score = 39.5 bits (93), Expect = 0.004
Identities = 34/169 (20%), Positives = 47/169 (27%), Gaps = 55/169 (32%)
Query: 343 EDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFYLNRYLTSSMYT---- 398
ED + L+ + +A +TT + +
Sbjct: 216 EDPDGVVDDMFLMNAAGTLLIAAHDTTACM-------------------IGLGTALLLDS 256
Query: 399 -------RSRRSLVQT-----LPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPK 446
R SLV L YL + RV A RD L G I K
Sbjct: 257 PDQLALLREDPSLVGNAVEELLRYLTIGQFGGERV-----------ATRDVELGGVRIAK 305
Query: 447 DTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAGP 495
++A+ D F +PE F R P +L FG G
Sbjct: 306 GEQVVAHVLAADFDPAFVEEPERFDITR---------RPAPHLAFGFGA 345
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A
{Streptomyces natalensis} PDB: 2x9p_A*
Length = 404
Score = 53.4 bits (129), Expect = 2e-07
Identities = 28/153 (18%), Positives = 52/153 (33%), Gaps = 26/153 (16%)
Query: 667 TDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDRLPS 726
+E ++ + M + AG ++ + + G + L HPD + A A+ D +
Sbjct: 223 DGELTEDRVAHLAMGLLFAGLDSVASIMDNGVVLLAAHPDQRAAALAD------PDVMAR 276
Query: 727 LNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDK 786
+ E + + P A D G I +++ + D+
Sbjct: 277 AVE-------EVLRTARAGGSVL----PPRYASEDMEFGGVTIRAGDLVLFDLGLPNFDE 325
Query: 787 EFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAG 819
+ PE F R P+ +L FG G
Sbjct: 326 RAFTGPEEFDAAR---------TPNPHLTFGHG 349
Score = 37.2 bits (87), Expect = 0.022
Identities = 22/160 (13%), Positives = 47/160 (29%), Gaps = 42/160 (26%)
Query: 346 TDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFYLNRYLTSSMYT----RSR 401
+E ++ + M + AG ++ ++ + + + +
Sbjct: 223 DGELTEDRVAHLAMGLLFAGLDSVASI-------------------MDNGVVLLAAHPDQ 263
Query: 402 RSLVQTLPYL------EAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFN 455
R+ P + E + + P A D G I +++ +
Sbjct: 264 RAAALADPDVMARAVEEVLRTARAGGSVL----PPRYASEDMEFGGVTIRAGDLVLFDLG 319
Query: 456 GVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAGP 495
D+ + PE F R P+ +L FG G
Sbjct: 320 LPNFDERAFTGPEEFDAAR---------TPNPHLTFGHGI 350
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A
{Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Length = 411
Score = 53.4 bits (129), Expect = 2e-07
Identities = 25/146 (17%), Positives = 47/146 (32%), Gaps = 35/146 (23%)
Query: 661 LKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVG 720
L + E++ + + + + G T ++G LL ++ + +
Sbjct: 221 LGAAVGRGEVGETEAVGLAGPLQIGGEAVTH-NVGQMLYLLLTRRELMARMRER------ 273
Query: 721 RDRLPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMII---- 776
+ D E + + S R +G + AL D + G I +
Sbjct: 274 PGARGTALD-------ELLRWISHRTSVG----LARIALEDVEVHGTRIAAGEPVYVSYL 322
Query: 777 -ANFNGVLMDKEFWHDPEVF-RPERF 800
AN DP+VF P+R
Sbjct: 323 AAN-----------RDPDVFPDPDRI 337
Score = 34.9 bits (81), Expect = 0.090
Identities = 30/172 (17%), Positives = 54/172 (31%), Gaps = 55/172 (31%)
Query: 340 LKSEDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFYLNRYLTSSMYT- 398
L + E++ + + + + G T N + +Y
Sbjct: 221 LGAAVGRGEVGETEAVGLAGPLQIGGEAVT-------HN-------------VGQMLYLL 260
Query: 399 ---RSRRSLVQTLPYL------EAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTM 449
R + ++ P E + + S R +G + AL D + G I
Sbjct: 261 LTRRELMARMRERPGARGTALDELLRWISHRTSVG----LARIALEDVEVHGTRIAAGEP 316
Query: 450 II-----ANFNGVLMDKEFWHDPEVF-RPERFLNDKGAIQVPDQYLPFGAGP 495
+ AN DP+VF P+R D+ P+ +L +G G
Sbjct: 317 VYVSYLAAN-----------RDPDVFPDPDRIDLDRD----PNPHLAYGNGH 353
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105,
oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea
recticatena}
Length = 413
Score = 53.0 bits (128), Expect = 2e-07
Identities = 32/156 (20%), Positives = 53/156 (33%), Gaps = 27/156 (17%)
Query: 664 EDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDR 723
+ + T + L+++ + AG ETT+ + G + LL HP+ +A R
Sbjct: 224 QRQEGTLDHAGLVSLAFLLLTAGHETTANMISLGVVGLLSHPEQLTVVKAN------PGR 277
Query: 724 LPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVL 783
P + E + Y ++ A D + G I +I +
Sbjct: 278 TPMAVE-------ELLRYFTIA-----DGVTSRLATEDVEIGGVSIKAGEGVIVSMLSAN 325
Query: 784 MDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAG 819
D + DP V ER +L FG G
Sbjct: 326 WDPAVFKDPAVLDVER---------GARHHLAFGFG 352
Score = 39.9 bits (94), Expect = 0.002
Identities = 26/169 (15%), Positives = 46/169 (27%), Gaps = 55/169 (32%)
Query: 343 EDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFYLNRYLTSSMYT---- 398
+ + T + L+++ + AG ETT + ++ +
Sbjct: 224 QRQEGTLDHAGLVSLAFLLLTAGHETTANM-------------------ISLGVVGLLSH 264
Query: 399 -------RSRRSLVQT-----LPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPK 446
++ L Y + R+ A D + G I
Sbjct: 265 PEQLTVVKANPGRTPMAVEELLRYFTIADGVTSRL-----------ATEDVEIGGVSIKA 313
Query: 447 DTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAGP 495
+I + D + DP V ER +L FG GP
Sbjct: 314 GEGVIVSMLSANWDPAVFKDPAVLDVER---------GARHHLAFGFGP 353
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450
vancomycin, oxidoreductase; HET: HEM; 1.70A
{Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A*
1lgf_A*
Length = 398
Score = 51.9 bits (125), Expect = 4e-07
Identities = 28/143 (19%), Positives = 47/143 (32%), Gaps = 35/143 (24%)
Query: 664 EDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDR 723
+ D ++ +L C+ + +AG + S +G G L +L HP ++
Sbjct: 215 AEYGDDATDEELRGFCVQVMLAGDDNISGMIGLGVLAMLRHP----------------EQ 258
Query: 724 LPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMII-----AN 778
+ + + E +R P A D TL G I K +I AN
Sbjct: 259 IDAFRGDEQS--AQRAVDELIRYLTVPYSPTPRIAREDLTLAGQEIKKGDSVICSLPAAN 316
Query: 779 FNGVLMDKEFWHDPEVF-RPERF 800
DP + +R
Sbjct: 317 -----------RDPALAPDVDRL 328
Score = 36.9 bits (86), Expect = 0.026
Identities = 26/164 (15%), Positives = 45/164 (27%), Gaps = 45/164 (27%)
Query: 343 EDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFYLNRYLTSSMYT---- 398
+ D ++ +L C+ + +AG + + + + +
Sbjct: 215 AEYGDDATDEELRGFCVQVMLAGDDNISGM-------------------IGLGVLAMLRH 255
Query: 399 -------RSRRSLVQTLPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMII 451
R Q A+ E +R P A D TL G I K +I
Sbjct: 256 PEQIDAFRGDEQSAQR-----AV-DELIRYLTVPYSPTPRIAREDLTLAGQEIKKGDSVI 309
Query: 452 ANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAGP 495
+ D D + R P ++ FG G
Sbjct: 310 CSLPAANRDPALAPDVDRLDVTR---------EPIPHVAFGHGV 344
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase;
HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP:
a.104.1.1
Length = 408
Score = 50.7 bits (122), Expect = 1e-06
Identities = 33/158 (20%), Positives = 52/158 (32%), Gaps = 30/158 (18%)
Query: 664 EDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDR 723
E D S +L + M AG ETT + LL PD + G
Sbjct: 221 EGDGDRLSPEELRDTLLLMISAGYETTVNVIDQAVHTLLTRPDQLALVRK------GEVT 274
Query: 724 LPSLNDRPHMPYLEAITYES-VRVFMGRTFSIPHRALRDTTLQ-GYFIPKDTMIIANFNG 781
+ + E + +E V+ R A+ D L G I + I+A++
Sbjct: 275 WADVVE-------ETLRHEPAVKHLPLRY------AVTDIALPDGRTIARGEPILASYAA 321
Query: 782 VLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAG 819
++ D + F R ++L FG G
Sbjct: 322 ANRHPDWHEDADTFDATR---------TVKEHLAFGHG 350
Score = 36.9 bits (86), Expect = 0.025
Identities = 30/170 (17%), Positives = 51/170 (30%), Gaps = 56/170 (32%)
Query: 343 EDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFYLNRYLTSSMYT---- 398
E D S +L + M AG ETT + + +++T
Sbjct: 221 EGDGDRLSPEELRDTLLLMISAGYETTVNV-------------------IDQAVHTLLTR 261
Query: 399 -------RSRRSLVQ-----TLPYLEAITYESVRVFMGRTFSIPHRALRDTTLQ-GYFIP 445
R TL + A+ + +R A+ D L G I
Sbjct: 262 PDQLALVRKGEVTWADVVEETLRHEPAVKHLPLRY-----------AVTDIALPDGRTIA 310
Query: 446 KDTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAGP 495
+ I+A++ ++ D + F R ++L FG G
Sbjct: 311 RGEPILASYAAANRHPDWHEDADTFDATR---------TVKEHLAFGHGV 351
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin
aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes
teichomyceticus} PDB: 3o1a_A*
Length = 384
Score = 46.4 bits (111), Expect = 3e-05
Identities = 23/156 (14%), Positives = 46/156 (29%), Gaps = 32/156 (20%)
Query: 664 EDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDR 723
+ S+ +L + + +E + L L L+ HPD + + +
Sbjct: 205 REHGAEISDEELAGLAEGNLIMAAEQMAAQLAVAVLLLVTHPDQMALLREK------PEL 258
Query: 724 LPSLNDRPHMPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVL 783
+ S + E + + S+ P AL D + G I ++ +
Sbjct: 259 IDSATE-------EVLRHASI-----VEAPAPRVALADVRMAGRDIHAGDVLTCSMLATN 306
Query: 784 MDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAG 819
+ F R ++ FG G
Sbjct: 307 RA-----PGDRFDITR---------EKATHMAFGHG 328
Score = 31.8 bits (73), Expect = 0.86
Identities = 19/169 (11%), Positives = 40/169 (23%), Gaps = 60/169 (35%)
Query: 343 EDKTDTFSESQLLAICMDMFMAGSETTTTLPSRHVNSHDMIVCFYLNRYLTSSMYT---- 398
+ S+ +L + + +E L ++
Sbjct: 205 REHGAEISDEELAGLAEGNLIMAAEQMAAQ-------------------LAVAVLLLVTH 245
Query: 399 -------RSRRSLVQT-----LPYLEAITYESVRVFMGRTFSIPHRALRDTTLQGYFIPK 446
R + L+ + L + + + RV AL D + G I
Sbjct: 246 PDQMALLREKPELIDSATEEVLRHASIVEAPAPRV-----------ALADVRMAGRDIHA 294
Query: 447 DTMIIANFNGVLMDKEFWHDPEVFRPERFLNDKGAIQVPDQYLPFGAGP 495
++ + + F R ++ FG G
Sbjct: 295 GDVLTCSMLATNRA-----PGDRFDITR---------EKATHMAFGHGI 329
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase,
cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Length = 381
Score = 45.8 bits (109), Expect = 4e-05
Identities = 16/141 (11%), Positives = 36/141 (25%), Gaps = 28/141 (19%)
Query: 679 CMDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDRLPSLNDRPHMPYLEA 738
+ AG+E T+ ++ L + P + ++ + E
Sbjct: 216 ALRALFAGAEMTANTVVDAVLAVSAEPGLAERIADD------PAAAQRTVA-------EV 262
Query: 739 ITYESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPE 798
+ RT A + L + I + ++ D E + +P+ +
Sbjct: 263 LRLHPALHLERRT------ATAEVRLGEHVIGEGEEVVVVVAAANRDPEVFAEPDRLDVD 316
Query: 799 RFLNDKGAIQVPDQYLPFGAG 819
R
Sbjct: 317 R---------PDADRALSAHR 328
Score = 32.7 bits (75), Expect = 0.47
Identities = 9/80 (11%), Positives = 18/80 (22%), Gaps = 15/80 (18%)
Query: 416 YESVRVFMGRTFSIPHRALRDTTLQGYFIPKDTMIIANFNGVLMDKEFWHDPEVFRPERF 475
RT A + L + I + ++ D E + +P+ +R
Sbjct: 265 LHPALHLERRT------ATAEVRLGEHVIGEGEEVVVVVAAANRDPEVFAEPDRLDVDR- 317
Query: 476 LNDKGAIQVPDQYLPFGAGP 495
Sbjct: 318 --------PDADRALSAHRG 329
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 37.2 bits (85), Expect = 0.007
Identities = 11/25 (44%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
Query: 258 EDKELKKIQSLLTELFANIDMVGAL 282
E + LKK+Q+ L +L+A+ D AL
Sbjct: 18 EKQALKKLQASL-KLYAD-DSAPAL 40
Score = 37.2 bits (85), Expect = 0.007
Identities = 11/25 (44%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
Query: 579 EDKELKKIQSLLTELFANIDMVGAL 603
E + LKK+Q+ L +L+A+ D AL
Sbjct: 18 EKQALKKLQASL-KLYAD-DSAPAL 40
Score = 28.0 bits (61), Expect = 7.0
Identities = 8/31 (25%), Positives = 10/31 (32%), Gaps = 15/31 (48%)
Query: 219 KQEVQHL--SL----PGAIIPMRDAFSVPVL 243
KQ ++ L SL S P L
Sbjct: 19 KQALKKLQASLKLYADD---------SAPAL 40
>2ywk_A Putative RNA-binding protein 11; RRM-domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; 1.54A {Homo sapiens}
Length = 95
Score = 29.5 bits (67), Expect = 1.2
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 13/53 (24%)
Query: 65 ELSKQYGPVVGLRVGKDRQ-------VVCFGYP-----AIKEMLSKEEFDGRP 105
EL Q GP+ + + KDR+ VCF +P AI + GRP
Sbjct: 35 ELFLQAGPLTKVTICKDREGKPKSFGFVCFKHPESVSYAIALLNGI-RLYGRP 86
>2cph_A RNA binding motif protein 19; RNA recognition motif, RRM, RNP,
structural genomics, NPPSFA; NMR {Mus musculus} SCOP:
d.58.7.1
Length = 107
Score = 29.6 bits (67), Expect = 1.3
Identities = 10/55 (18%), Positives = 15/55 (27%), Gaps = 14/55 (25%)
Query: 65 ELSKQYGPVVGLRVGKDRQV---------VCFGYP-----AIKEMLSKEEFDGRP 105
EL +G + +R+ K V F A + GR
Sbjct: 34 ELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNALCHSTHLYGRR 88
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin
folding and function, myosin bindi protein, protein
binding; 2.90A {Saccharomyces cerevisiae}
Length = 778
Score = 31.3 bits (70), Expect = 1.8
Identities = 22/170 (12%), Positives = 57/170 (33%), Gaps = 16/170 (9%)
Query: 556 RDAFSVPVLNTLWSMLAGIRYSPEDKELKKIQSLLTELF-ANIDMVGALFSQFPILRYVA 614
+ F V++ + S++ + L I L+EL+ + + +F + +
Sbjct: 202 QKDFDKAVVDFMSSLIVEAEIDVGNDPLSIIVKTLSELYPSLTTLCSEIFLTKGLSKLF- 260
Query: 615 PEMSGYKSFVSIHQKVWKFL---------RNELDNH-----KETFNPDEMRDIMDVYLKT 660
+ + + +++ + L R + + + + N ++++ + L
Sbjct: 261 KKRVFEEQDLQFTKELLRLLSSACIDETMRTYITENYLQLLERSLNVEDVQIYSALVLVK 320
Query: 661 LKSEDKTDTFSESQLLAICMDMFMAGSETTSKSLGFGFLYLLLHPDVQKK 710
S K + QL I ++ + YL L V+
Sbjct: 321 TWSFTKLTCINLKQLSEIFINAISRRIVPKVEMSVEALAYLSLKASVKIM 370
>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic
vesicle, membrane, Ca structural protein; 7.94A {Bos
taurus}
Length = 190
Score = 30.1 bits (67), Expect = 1.9
Identities = 13/54 (24%), Positives = 23/54 (42%), Gaps = 4/54 (7%)
Query: 493 AGPDRLLVTDEQL--WVEQRRFVLRQLREFGFGKRTMAQLVEEEAYQLVQLFKQ 544
A DRL E + W E++R L++L K + E+ L + ++
Sbjct: 75 AQADRLTQEPESIRKWREEQRKRLQELDA--ASKVMEQEWREKAKKDLEEWNQR 126
>3ihv_A SUSD homolog; NP_813570.1, structural genomics, joint center
structural genomics, JCSG, protein structure initiative;
HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Length = 535
Score = 29.4 bits (66), Expect = 5.5
Identities = 10/53 (18%), Positives = 14/53 (26%), Gaps = 11/53 (20%)
Query: 150 RERAGIKPVTALGYKVDVLLSKAGLLVTDEQLWVEQRRFVLRQLREFGF-GKR 201
R R P + L + E + E+ E F G R
Sbjct: 427 RRRGYGNPSNTSACDLPQGLDETSFR---EAVRKERS-------YELSFEGHR 469
>3hoa_A Thermostable carboxypeptidase 1; proline-rich loop, hydrolase;
2.10A {Thermus thermophilus HB27} PDB: 1wgz_A
Length = 509
Score = 29.4 bits (65), Expect = 5.8
Identities = 20/143 (13%), Positives = 46/143 (32%), Gaps = 3/143 (2%)
Query: 620 YKSFVSIHQKVWKFLRNELDNHKETFNPDEMRDIMDVYLKTLKSEDKTDTFSESQLLAIC 679
K ++ ++ + L + + ++D Y +++ + F+E L
Sbjct: 135 LKRVYALTKEKAEVLFALPPAPGDPPYGELYDALLDGYEPGMRARELLPLFAE---LKEG 191
Query: 680 MDMFMAGSETTSKSLGFGFLYLLLHPDVQKKAQAEIDRVVGRDRLPSLNDRPHMPYLEAI 739
+ + + K L+ + Q++ E+ G D D P+ AI
Sbjct: 192 LKGLLDRILGSGKRPDTSILHRPYPVEAQRRFALELLSACGYDLEAGRLDPTAHPFEIAI 251
Query: 740 TYESVRVFMGRTFSIPHRALRDT 762
VR+ + + T
Sbjct: 252 GPGDVRITTRYYEDFFNAGIFGT 274
>1x5u_A Splicing factor 3B subunit 4 (spliceosome associated protein 49)
(SAP 49) (SF3B50)...; structure genomics,RRM
domain,splicing factor 3B; NMR {Homo sapiens} SCOP:
d.58.7.1
Length = 105
Score = 27.2 bits (61), Expect = 7.5
Identities = 18/54 (33%), Positives = 21/54 (38%), Gaps = 14/54 (25%)
Query: 65 ELSKQYGPVVGLRVGKDRQV--------VCFGYP-----AIKEMLSKEEFDGRP 105
EL Q GPVV + KDR V F AIK M + G+P
Sbjct: 34 ELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIM-DMIKLYGKP 86
>3nqp_A SUSD superfamily protein; structural genomics, joint center for
structural genomics, J protein structure initiative,
PSI-2; 1.90A {Bacteroides fragilis nctc 9343}
Length = 514
Score = 29.0 bits (65), Expect = 8.1
Identities = 9/53 (16%), Positives = 14/53 (26%), Gaps = 11/53 (20%)
Query: 150 RERAGIKPVTALGYKVDVLLSKAGLLVTDEQLWVEQRRFVLRQLREFGF-GKR 201
R+RA Y + E + +EF G+R
Sbjct: 410 RKRAYGNAWDETLYAYPETADFTTNE---LAILHE-KD------KEFIQEGQR 452
>3lqv_A PRE-mRNA branch site protein P14; cysless mutant, PRE-mRNA
splicing, adenine, mRNA processing, nucleus,
phosphoprotein, RNA-binding; HET: ADE; 2.38A {Homo
sapiens} PDB: 2f9d_A 2f9j_A 2fho_B
Length = 115
Score = 27.3 bits (61), Expect = 9.9
Identities = 11/51 (21%), Positives = 19/51 (37%), Gaps = 11/51 (21%)
Query: 65 ELSKQYGPVVGLRVGKDRQVVCFGY----------PAIKEMLSKEEFDGRP 105
++ +YGP+ +RVG + Y A+ + LS R
Sbjct: 27 DIFGKYGPIRQIRVGNTPETRGTAYVVYEDIFDAKNAV-DHLSGFNVSNRY 76
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.323 0.139 0.415
Gapped
Lambda K H
0.267 0.0762 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 12,854,009
Number of extensions: 807227
Number of successful extensions: 2306
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1967
Number of HSP's successfully gapped: 260
Length of query: 820
Length of database: 6,701,793
Length adjustment: 101
Effective length of query: 719
Effective length of database: 3,881,772
Effective search space: 2790994068
Effective search space used: 2790994068
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 61 (27.2 bits)