BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13735
(792 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 215 bits (547), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 121/355 (34%), Positives = 196/355 (55%), Gaps = 41/355 (11%)
Query: 1 KDVVKELRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTI--- 57
KD + ++R + A D+++ + I +G FG++ LV K + + MK + + +M
Sbjct: 60 KDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSA 119
Query: 58 ----ERDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKAR 113
ERDIM + P++V LFY+FQD ++Y +MEY+ GGD V L+ N + E AR
Sbjct: 120 FFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD---VPEKWAR 176
Query: 114 FYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVG 173
FY E+ A+ +H +G++HRD+KPDNMLL +GHLKL DFG+ +++K G ++ VG
Sbjct: 177 FYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVG 236
Query: 174 TPEYVAPEVLEWMEGNHGSDGYTG-SCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILA 232
TP+Y++PEVL+ + G DGY G CD WS+GV YE+L G TPF ++L TYS I+
Sbjct: 237 TPDYISPEVLK----SQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM- 291
Query: 233 CDTEDTVSFPSSIRLSTAMVNFVQSLVQKLDARL---NMDQVLGHPVF--------DCLD 281
+ +++++FP +S N + + + + RL ++++ H F D
Sbjct: 292 -NHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQWAWETLRD 350
Query: 282 SDPPCIPPPSQE---NKF----HKKDKRKASPSLKAFQKEGRYLDSALPLIGISY 329
+ P +P S + + F K + + P KAF + + LP +G +Y
Sbjct: 351 TVAPVVPDLSSDIDTSNFDDLEEDKGEEETFPIPKAF------VGNQLPFVGFTY 399
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 215 bits (547), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 191/347 (55%), Gaps = 29/347 (8%)
Query: 3 VVKELRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTI----- 57
+VK++R + A D+D+ + I +G FG++ LV K S + MK + + +M
Sbjct: 63 IVKKIRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFF 122
Query: 58 --ERDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFY 115
ERDIM + P++V LF +FQD ++Y +MEY+ GGD V L+ N + E A+FY
Sbjct: 123 WEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYD---VPEKWAKFY 179
Query: 116 IYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTP 175
E+ A+ +H +G +HRD+KPDNMLL GHLKL DFG+ ++D+ G + VGTP
Sbjct: 180 TAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTP 239
Query: 176 EYVAPEVLEWMEGNHGSDGYTG-SCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACD 234
+Y++PEVL+ + G DGY G CD WS+GV +E+L G TPF ++L TYS I+ D
Sbjct: 240 DYISPEVLK----SQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIM--D 293
Query: 235 TEDTVSFPSSIRLSTAMVNFVQSLVQKLDARL---NMDQVLGHPVF--------DCLDSD 283
++++ FP +S N + + + + RL ++++ HP F + ++
Sbjct: 294 HKNSLCFPEDAEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKNDQWNWDNIRETA 353
Query: 284 PPCIPPPSQE-NKFHKKDKRKASPSLKAFQKEGRYLDSALPLIGISY 329
P +P S + + + D ++ F ++ + LP IG +Y
Sbjct: 354 APVVPELSSDIDSSNFDDIEDDKGDVETFPIPKAFVGNQLPFIGFTY 400
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 214 bits (546), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 121/355 (34%), Positives = 196/355 (55%), Gaps = 41/355 (11%)
Query: 1 KDVVKELRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTI--- 57
KD + ++R + A D+++ + I +G FG++ LV K + + MK + + +M
Sbjct: 55 KDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSA 114
Query: 58 ----ERDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKAR 113
ERDIM + P++V LFY+FQD ++Y +MEY+ GGD V L+ N + E AR
Sbjct: 115 FFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD---VPEKWAR 171
Query: 114 FYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVG 173
FY E+ A+ +H +G++HRD+KPDNMLL +GHLKL DFG+ +++K G ++ VG
Sbjct: 172 FYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVG 231
Query: 174 TPEYVAPEVLEWMEGNHGSDGYTG-SCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILA 232
TP+Y++PEVL+ + G DGY G CD WS+GV YE+L G TPF ++L TYS I+
Sbjct: 232 TPDYISPEVLK----SQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM- 286
Query: 233 CDTEDTVSFPSSIRLSTAMVNFVQSLVQKLDARL---NMDQVLGHPVF--------DCLD 281
+ +++++FP +S N + + + + RL ++++ H F D
Sbjct: 287 -NHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQWAWETLRD 345
Query: 282 SDPPCIPPPSQE---NKF----HKKDKRKASPSLKAFQKEGRYLDSALPLIGISY 329
+ P +P S + + F K + + P KAF + + LP +G +Y
Sbjct: 346 TVAPVVPDLSSDIDTSNFDDLEEDKGEEETFPIPKAF------VGNQLPFVGFTY 394
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 214 bits (546), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 121/355 (34%), Positives = 196/355 (55%), Gaps = 41/355 (11%)
Query: 1 KDVVKELRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTI--- 57
KD + ++R + A D+++ + I +G FG++ LV K + + MK + + +M
Sbjct: 60 KDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSA 119
Query: 58 ----ERDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKAR 113
ERDIM + P++V LFY+FQD ++Y +MEY+ GGD V L+ N + E AR
Sbjct: 120 FFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD---VPEKWAR 176
Query: 114 FYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVG 173
FY E+ A+ +H +G++HRD+KPDNMLL +GHLKL DFG+ +++K G ++ VG
Sbjct: 177 FYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVG 236
Query: 174 TPEYVAPEVLEWMEGNHGSDGYTG-SCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILA 232
TP+Y++PEVL+ + G DGY G CD WS+GV YE+L G TPF ++L TYS I+
Sbjct: 237 TPDYISPEVLK----SQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM- 291
Query: 233 CDTEDTVSFPSSIRLSTAMVNFVQSLVQKLDARL---NMDQVLGHPVF--------DCLD 281
+ +++++FP +S N + + + + RL ++++ H F D
Sbjct: 292 -NHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQWAWETLRD 350
Query: 282 SDPPCIPPPSQE---NKF----HKKDKRKASPSLKAFQKEGRYLDSALPLIGISY 329
+ P +P S + + F K + + P KAF + + LP +G +Y
Sbjct: 351 TVAPVVPDLSSDIDTSNFDDLEEDKGEEETFPIPKAF------VGNQLPFVGFTY 399
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 125/350 (35%), Positives = 191/350 (54%), Gaps = 28/350 (8%)
Query: 3 VVKELRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIE---- 58
+VKE++ + DF+I + I +G FG++ +V+ K + + MK + + +M E
Sbjct: 81 LVKEMQ---LHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACF 137
Query: 59 ---RDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFY 115
RD++V C +I L Y+FQD NH+Y +M+Y GGD +TLL ++ L E ARFY
Sbjct: 138 REERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLL-SKFEDKLPEDMARFY 196
Query: 116 IYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTP 175
I E+ A+ +H L YVHRDIKPDN+LL GH++L DFGS +++ +G ++S V VGTP
Sbjct: 197 IGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTP 256
Query: 176 EYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDT 235
+Y++PE+L+ ME G Y CD WS+GV YE+L G TPF E+L TY I+ +
Sbjct: 257 DYISPEILQAMEDGMGK--YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM--NH 312
Query: 236 EDTVSFPSSIR-LSTAMVNFVQSLVQKLDARLNMDQV---LGHPVFDCLDS------DPP 285
E+ FPS + +S + +Q L+ + RL + + H F+ L+ + P
Sbjct: 313 EERFQFPSHVTDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGLNWENIRNLEAP 372
Query: 286 CIP---PPSQENKFHKKDKRKASPSLKAFQKEGRYLDSALPLIGISYTGE 332
IP PS + F D + + + LP IG ++T E
Sbjct: 373 YIPDVSSPSDTSNFDVDDDVLRNTEILPPGSHTGFSGLHLPFIGFTFTTE 422
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 123/352 (34%), Positives = 190/352 (53%), Gaps = 25/352 (7%)
Query: 1 KDVVKELRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIE-- 58
K + +++ + DF+I + I +G FG++ +V+ K + + MK + + +M E
Sbjct: 60 KPFTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETA 119
Query: 59 -----RDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKAR 113
RD++V C +I L Y+FQD NH+Y +M+Y GGD +TLL ++ L E AR
Sbjct: 120 CFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLL-SKFEDKLPEDMAR 178
Query: 114 FYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVG 173
FYI E+ A+ +H L YVHRDIKPDN+LL GH++L DFGS +++ +G ++S V VG
Sbjct: 179 FYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVG 238
Query: 174 TPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILAC 233
TP+Y++PE+L+ ME G Y CD WS+GV YE+L G TPF E+L TY I+
Sbjct: 239 TPDYISPEILQAMEDGMGK--YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM-- 294
Query: 234 DTEDTVSFPSSIR-LSTAMVNFVQSLVQKLDARLNMDQV---LGHPVFDCLDS------D 283
+ E+ FPS + +S + +Q L+ + RL + + H F+ L+ +
Sbjct: 295 NHEERFQFPSHVTDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGLNWENIRNLE 354
Query: 284 PPCIP---PPSQENKFHKKDKRKASPSLKAFQKEGRYLDSALPLIGISYTGE 332
P IP PS + F D + + + LP IG ++T E
Sbjct: 355 APYIPDVSSPSDTSNFDVDDDVLRNTEILPPGSHTGFSGLHLPFIGFTFTTE 406
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 125/379 (32%), Positives = 202/379 (53%), Gaps = 37/379 (9%)
Query: 1 KDVVKELRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIE-- 58
K +++Q + DF+I + I +G FG++ +V+ K + F MK + + +M E
Sbjct: 60 KPFTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETA 119
Query: 59 -----RDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKAR 113
RD++V +I L Y+FQD N++Y +M+Y GGD +TLL ++ L E AR
Sbjct: 120 CFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLL-SKFEDRLPEEMAR 178
Query: 114 FYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVG 173
FY+ E+ A+ +H L YVHRDIKPDN+L+ GH++L DFGS ++ ++G ++S V VG
Sbjct: 179 FYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVG 238
Query: 174 TPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILAC 233
TP+Y++PE+L+ MEG G Y CD WS+GV YE+L G TPF E+L TY I+
Sbjct: 239 TPDYISPEILQAMEGGKGR--YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM-- 294
Query: 234 DTEDTVSFPSSIR-LSTAMVNFVQSLVQKLDARLNMDQV---LGHPVFDCLDSD------ 283
+ ++ FP+ + +S + ++ L+ + RL + + HP F +D D
Sbjct: 295 NHKERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGIDWDNIRNCE 354
Query: 284 PPCIP---PPSQENKFH------KKDKRKASPSLKAFQKEGRYLDSALPLIGISYTGEPM 334
P IP P+ + F K + P+ AF LP +G +YT +
Sbjct: 355 APYIPEVSSPTDTSNFDVDDDCLKNSETMPPPTHTAFSGH------HLPFVGFTYTSSCV 408
Query: 335 GANTNTSSDSTLPPSSEDM 353
++ + + P S+E++
Sbjct: 409 LSDRSCLRVTAGPTSAENL 427
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 118/353 (33%), Positives = 183/353 (51%), Gaps = 28/353 (7%)
Query: 3 VVKELRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIE---- 58
+V L++ + DF+I + I +G F ++ +V+ KQ+ + MK + + M E
Sbjct: 49 IVVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCF 108
Query: 59 ---RDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFY 115
RD++V +I L ++FQD N++Y +MEY GGD +TLL +E ARFY
Sbjct: 109 REERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAE-MARFY 167
Query: 116 IYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTP 175
+ E+ A+ +H LGYVHRDIKPDN+LL GH++L DFGS ++ +G ++S+V VGTP
Sbjct: 168 LAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTP 227
Query: 176 EYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDT 235
+Y++PE+L+ + G G+ Y CD W++GV +YE+ G TPF ++ TY I+
Sbjct: 228 DYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIV--HY 285
Query: 236 EDTVSFP-SSIRLSTAMVNFVQSLVQKLDARL---NMDQVLGHPVFDCLDSDP--PCIPP 289
++ +S P + +F+Q L+ + RL HP F LD D +PP
Sbjct: 286 KEHLSLPLVDEGVPEEARDFIQRLLCPPETRLGRGGAGDFRTHPFFFGLDWDGLRDSVPP 345
Query: 290 --PSQENKFHKKDKRKASPSLKAFQ----------KEGRYLDSALPLIGISYT 330
P E + L A +EG L LP +G SY+
Sbjct: 346 FTPDFEGATDTCNFDLVEDGLTAMVSGGGETLSDIREGAPLGVHLPFVGYSYS 398
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/238 (37%), Positives = 140/238 (58%), Gaps = 22/238 (9%)
Query: 4 VKELRQKNVSASDFDIKRFIQQGNFGDIYLVEE------KQSHNTFVMKKV---LREKMP 54
VKE +K S F++ + + QG+FG ++LV++ +Q + V+KK +R+++
Sbjct: 14 VKEGHEK-ADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVR 72
Query: 55 NTIERDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARF 114
+ERDI+V+ P+IV L Y+FQ +Y I++++ GGD T L + +E +F
Sbjct: 73 TKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV--MFTEEDVKF 130
Query: 115 YIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFG-SATQVDKNGRIKSIVPVG 173
Y+ ELA A+ +LH LG ++RD+KP+N+LL GH+KLTDFG S +D + S G
Sbjct: 131 YLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF--CG 188
Query: 174 TPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSIL 231
T EY+APEV+ G+T S D WS GV+ +E+LTG+ PF + T + IL
Sbjct: 189 TVEYMAPEVVN-------RRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMIL 239
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/238 (37%), Positives = 140/238 (58%), Gaps = 22/238 (9%)
Query: 4 VKELRQKNVSASDFDIKRFIQQGNFGDIYLVEE------KQSHNTFVMKKV---LREKMP 54
VKE +K S F++ + + QG+FG ++LV++ +Q + V+KK +R+++
Sbjct: 15 VKEGHEK-ADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVR 73
Query: 55 NTIERDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARF 114
+ERDI+V+ P+IV L Y+FQ +Y I++++ GGD T L + +E +F
Sbjct: 74 TKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV--MFTEEDVKF 131
Query: 115 YIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFG-SATQVDKNGRIKSIVPVG 173
Y+ ELA A+ +LH LG ++RD+KP+N+LL GH+KLTDFG S +D + S G
Sbjct: 132 YLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF--CG 189
Query: 174 TPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSIL 231
T EY+APEV+ G+T S D WS GV+ +E+LTG+ PF + T + IL
Sbjct: 190 TVEYMAPEVVN-------RRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMIL 240
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/238 (37%), Positives = 140/238 (58%), Gaps = 22/238 (9%)
Query: 4 VKELRQKNVSASDFDIKRFIQQGNFGDIYLVEE------KQSHNTFVMKKV---LREKMP 54
VKE +K S F++ + + QG+FG ++LV++ +Q + V+KK +R+++
Sbjct: 14 VKEGHEK-ADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVR 72
Query: 55 NTIERDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARF 114
+ERDI+V+ P+IV L Y+FQ +Y I++++ GGD T L + +E +F
Sbjct: 73 TKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV--MFTEEDVKF 130
Query: 115 YIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFG-SATQVDKNGRIKSIVPVG 173
Y+ ELA A+ +LH LG ++RD+KP+N+LL GH+KLTDFG S +D + S G
Sbjct: 131 YLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF--CG 188
Query: 174 TPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSIL 231
T EY+APEV+ G+T S D WS GV+ +E+LTG+ PF + T + IL
Sbjct: 189 TVEYMAPEVVN-------RRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMIL 239
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 79/214 (36%), Positives = 125/214 (58%), Gaps = 21/214 (9%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEE---KQSHNTFVMKKV------LREKMPNTIERDIMVKS 65
S F++ + + QG+FG ++LV + S + + MK + +R+++ +ERDI+
Sbjct: 28 SHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADV 87
Query: 66 KCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQY 125
P++V L Y+FQ +Y I++++ GGD T L + +E +FY+ ELA + +
Sbjct: 88 NHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALGLDH 145
Query: 126 LHGLGYVHRDIKPDNMLLSATGHLKLTDFG-SATQVDKNGRIKSIVPVGTPEYVAPEVLE 184
LH LG ++RD+KP+N+LL GH+KLTDFG S +D + S GT EY+APEV+
Sbjct: 146 LHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSF--CGTVEYMAPEVVN 203
Query: 185 WMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
G++ S D WS GV+ +E+LTGS PF
Sbjct: 204 -------RQGHSHSADWWSYGVLMFEMLTGSLPF 230
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 145 bits (367), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 81/229 (35%), Positives = 128/229 (55%), Gaps = 23/229 (10%)
Query: 17 FDIKRFIQQGNFGDIYLVEEKQSHNT---FVMKKVLREKM---------PNTIERDIMVK 64
F++ R + +G +G ++ V + NT F MK VL++ M ER+I+ +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMK-VLKKAMIVRNAKDTAHTKAERNILEE 77
Query: 65 SKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQ 124
K P+IV+L Y+FQ +Y I+EY++GG+ LE + G E A FY+ E++ A+
Sbjct: 78 VKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLERE--GIFMEDTACFYLAEISMALG 135
Query: 125 YLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLE 184
+LH G ++RD+KP+N++L+ GH+KLTDFG + +G + GT EY+APE+L
Sbjct: 136 HLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTF-CGTIEYMAPEILM 194
Query: 185 WMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILAC 233
G+ + D WS+G + Y++LTG+ PF E T IL C
Sbjct: 195 -------RSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKC 236
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 81/229 (35%), Positives = 128/229 (55%), Gaps = 23/229 (10%)
Query: 17 FDIKRFIQQGNFGDIYLVEEKQSHNT---FVMKKVLREKM---------PNTIERDIMVK 64
F++ R + +G +G ++ V + NT F MK VL++ M ER+I+ +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMK-VLKKAMIVRNAKDTAHTKAERNILEE 77
Query: 65 SKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQ 124
K P+IV+L Y+FQ +Y I+EY++GG+ LE + G E A FY+ E++ A+
Sbjct: 78 VKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLERE--GIFMEDTACFYLAEISMALG 135
Query: 125 YLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLE 184
+LH G ++RD+KP+N++L+ GH+KLTDFG + +G + GT EY+APE+L
Sbjct: 136 HLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXF-CGTIEYMAPEILM 194
Query: 185 WMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILAC 233
G+ + D WS+G + Y++LTG+ PF E T IL C
Sbjct: 195 -------RSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKC 236
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/259 (33%), Positives = 145/259 (55%), Gaps = 26/259 (10%)
Query: 9 QKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK-----KVLREK-MPNTI-ERDI 61
Q FD + + G+FG + LV+ K+S N + MK KV++ K + +T+ E+ I
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQ 121
+ P++V L +SF+D +++Y +MEYV GG+ + L G SE ARFY ++
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVL 152
Query: 122 AVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPE 181
+YLH L ++RD+KP+N+L+ G++++TDFG A +V GR + GTPEY+APE
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWXL--AGTPEYLAPE 208
Query: 182 VLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSF 241
++ S GY + D W++GV+ YE+ G PF + Y I++ V F
Sbjct: 209 IIL-------SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG----KVRF 257
Query: 242 PSSIRLSTAMVNFVQSLVQ 260
PS S+ + + +++L+Q
Sbjct: 258 PS--HFSSDLKDLLRNLLQ 274
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/259 (33%), Positives = 145/259 (55%), Gaps = 26/259 (10%)
Query: 9 QKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK-----KVLREK-MPNTI-ERDI 61
Q FD + + G+FG + LV+ K+S N + MK KV++ K + +T+ E+ I
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQ 121
+ P++V L +SF+D +++Y +MEYV GG+ + L G SE ARFY ++
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVL 152
Query: 122 AVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPE 181
+YLH L ++RD+KP+N+L+ G++++TDFG A +V GR + GTPEY+APE
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWXL--CGTPEYLAPE 208
Query: 182 VLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSF 241
++ S GY + D W++GV+ YE+ G PF + Y I++ V F
Sbjct: 209 IIL-------SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS----GKVRF 257
Query: 242 PSSIRLSTAMVNFVQSLVQ 260
PS S+ + + +++L+Q
Sbjct: 258 PS--HFSSDLKDLLRNLLQ 274
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/259 (33%), Positives = 145/259 (55%), Gaps = 26/259 (10%)
Query: 9 QKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK-----KVLREK-MPNTI-ERDI 61
Q FD + + G+FG + LV+ K+S N + MK KV++ K + +T+ E+ I
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQ 121
+ P++V L +SF+D +++Y +MEYV GG+ + L G SE ARFY ++
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVL 152
Query: 122 AVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPE 181
+YLH L ++RD+KP+N+L+ G++++TDFG A +V GR + GTPEY+APE
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWXL--CGTPEYLAPE 208
Query: 182 VLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSF 241
++ S GY + D W++GV+ YE+ G PF + Y I++ V F
Sbjct: 209 IIL-------SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS----GKVRF 257
Query: 242 PSSIRLSTAMVNFVQSLVQ 260
PS S+ + + +++L+Q
Sbjct: 258 PS--HFSSDLKDLLRNLLQ 274
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/259 (33%), Positives = 145/259 (55%), Gaps = 26/259 (10%)
Query: 9 QKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK-----KVLREK-MPNTI-ERDI 61
Q FD + + G+FG + LV+ K+S N + MK KV++ K + +T+ E+ I
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQ 121
+ P++V L +SF+D +++Y +MEYV GG+ + L G SE ARFY ++
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVL 152
Query: 122 AVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPE 181
+YLH L ++RD+KP+N+L+ G++++TDFG A +V GR + GTPEY+APE
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWXL--CGTPEYLAPE 208
Query: 182 VLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSF 241
++ S GY + D W++GV+ YE+ G PF + Y I++ V F
Sbjct: 209 IIL-------SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS----GKVRF 257
Query: 242 PSSIRLSTAMVNFVQSLVQ 260
PS S+ + + +++L+Q
Sbjct: 258 PS--HFSSDLKDLLRNLLQ 274
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/259 (33%), Positives = 145/259 (55%), Gaps = 26/259 (10%)
Query: 9 QKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK-----KVLREK-MPNTI-ERDI 61
Q FD + + G+FG + LV+ K+S N + MK KV++ K + +T+ E+ I
Sbjct: 36 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 95
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQ 121
+ P++V L +SF+D +++Y +MEYV GG+ + L G SE ARFY ++
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVL 153
Query: 122 AVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPE 181
+YLH L ++RD+KP+N+L+ G++++TDFG A +V GR + GTPEY+APE
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWXL--CGTPEYLAPE 209
Query: 182 VLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSF 241
++ S GY + D W++GV+ YE+ G PF + Y I++ V F
Sbjct: 210 IIL-------SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS----GKVRF 258
Query: 242 PSSIRLSTAMVNFVQSLVQ 260
PS S+ + + +++L+Q
Sbjct: 259 PS--HFSSDLKDLLRNLLQ 275
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/259 (33%), Positives = 145/259 (55%), Gaps = 26/259 (10%)
Query: 9 QKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK-----KVLREK-MPNTI-ERDI 61
Q FD + + G+FG + LV+ K+S N + MK KV++ K + +T+ E+ I
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQ 121
+ P++V L +SF+D +++Y +MEYV GG+ + L G SE ARFY ++
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVL 152
Query: 122 AVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPE 181
+YLH L ++RD+KP+N+L+ G++++TDFG A +V GR + GTPEY+APE
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWXL--XGTPEYLAPE 208
Query: 182 VLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSF 241
++ S GY + D W++GV+ YE+ G PF + Y I++ V F
Sbjct: 209 IIL-------SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG----KVRF 257
Query: 242 PSSIRLSTAMVNFVQSLVQ 260
PS S+ + + +++L+Q
Sbjct: 258 PS--HFSSDLKDLLRNLLQ 274
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/259 (33%), Positives = 145/259 (55%), Gaps = 26/259 (10%)
Query: 9 QKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK-----KVLREK-MPNTI-ERDI 61
Q FD + + G+FG + LV+ K+S N + MK KV++ K + +T+ E+ I
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQ 121
+ P++V L +SF+D +++Y +MEYV GG+ + L G SE ARFY ++
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVL 152
Query: 122 AVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPE 181
+YLH L ++RD+KP+N+L+ G++++TDFG A +V GR + GTPEY+APE
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWXL--CGTPEYLAPE 208
Query: 182 VLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSF 241
++ S GY + D W++GV+ YE+ G PF + Y I++ V F
Sbjct: 209 IIL-------SKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVS----GKVRF 257
Query: 242 PSSIRLSTAMVNFVQSLVQ 260
PS S+ + + +++L+Q
Sbjct: 258 PS--HFSSDLKDLLRNLLQ 274
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/259 (33%), Positives = 145/259 (55%), Gaps = 26/259 (10%)
Query: 9 QKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK-----KVLREK-MPNTI-ERDI 61
Q FD + + G+FG + LV+ K+S N + MK KV++ K + +T+ E+ I
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQ 121
+ P++V L +SF+D +++Y +MEYV GG+ + L G SE ARFY ++
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVL 152
Query: 122 AVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPE 181
+YLH L ++RD+KP+N+L+ G++++TDFG A +V GR + GTPEY+APE
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWXL--CGTPEYLAPE 208
Query: 182 VLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSF 241
++ S GY + D W++GV+ YE+ G PF + Y I++ V F
Sbjct: 209 IIL-------SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS----GKVRF 257
Query: 242 PSSIRLSTAMVNFVQSLVQ 260
PS S+ + + +++L+Q
Sbjct: 258 PS--HFSSDLKDLLRNLLQ 274
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/242 (35%), Positives = 140/242 (57%), Gaps = 26/242 (10%)
Query: 26 GNFGDIYLVEEKQSHNTFVMK-----KVLREK-MPNTI-ERDIMVKSKCPYIVNLFYSFQ 78
G+FG + LV+ K++ N F MK KV++ K + +T+ E+ I+ P++V L YSF+
Sbjct: 52 GSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFK 111
Query: 79 DMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKP 138
D +++Y +MEYV GG+ + L G SE ARFY ++ +YLH L ++RD+KP
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKP 169
Query: 139 DNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGS 198
+N+L+ G++++TDFG A +V GR + GTPEY+APE++ S GY +
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRV--KGRTWXL--CGTPEYLAPEIIL-------SKGYNKA 218
Query: 199 CDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRLSTAMVNFVQSL 258
D W++GV+ YE+ G PF + Y I++ V FPS S+ + + +++L
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS----GKVRFPS--HFSSDLKDLLRNL 272
Query: 259 VQ 260
+Q
Sbjct: 273 LQ 274
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 86/242 (35%), Positives = 140/242 (57%), Gaps = 26/242 (10%)
Query: 26 GNFGDIYLVEEKQSHNTFVMK-----KVLREK-MPNTI-ERDIMVKSKCPYIVNLFYSFQ 78
G+FG + LV+ K++ N F MK KV++ K + +T+ E+ I+ P++V L YSF+
Sbjct: 52 GSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFK 111
Query: 79 DMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKP 138
D +++Y +MEYV GG+ + L G SE ARFY ++ +YLH L ++RD+KP
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKP 169
Query: 139 DNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGS 198
+N+L+ G++++TDFG A +V GR + GTPEY+APE++ S GY +
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRV--KGRTWXL--CGTPEYLAPEIIL-------SKGYNKA 218
Query: 199 CDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRLSTAMVNFVQSL 258
D W++GV+ YE+ G PF + Y I++ V FPS S+ + + +++L
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS----GKVRFPS--HFSSDLKDLLRNL 272
Query: 259 VQ 260
+Q
Sbjct: 273 LQ 274
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 86/242 (35%), Positives = 140/242 (57%), Gaps = 26/242 (10%)
Query: 26 GNFGDIYLVEEKQSHNTFVMK-----KVLREK-MPNTI-ERDIMVKSKCPYIVNLFYSFQ 78
G+FG + LV+ K++ N F MK KV++ K + +T+ E+ I+ P++V L YSF+
Sbjct: 52 GSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFK 111
Query: 79 DMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKP 138
D +++Y +MEYV GG+ + L G SE ARFY ++ +YLH L ++RD+KP
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKP 169
Query: 139 DNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGS 198
+N+L+ G++++TDFG A +V GR + GTPEY+APE++ S GY +
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRV--KGRTWXL--CGTPEYLAPEIIL-------SKGYNKA 218
Query: 199 CDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRLSTAMVNFVQSL 258
D W++GV+ YE+ G PF + Y I++ V FPS S+ + + +++L
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS----GKVRFPS--HFSSDLKDLLRNL 272
Query: 259 VQ 260
+Q
Sbjct: 273 LQ 274
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 145/259 (55%), Gaps = 26/259 (10%)
Query: 9 QKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK-----KVLREK-MPNTI-ERDI 61
Q FD + + G+FG + LV+ K+S N + MK KV++ K + +T+ E+ I
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQ 121
+ P++V L +SF+D +++Y +MEYV GG+ + L G +E ARFY ++
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFAEPHARFYAAQIVL 152
Query: 122 AVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPE 181
+YLH L ++RD+KP+N+L+ G++++TDFG A +V GR + GTPEY+APE
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWXL--CGTPEYLAPE 208
Query: 182 VLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSF 241
++ S GY + D W++GV+ YE+ G PF + Y I++ V F
Sbjct: 209 IIL-------SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS----GKVRF 257
Query: 242 PSSIRLSTAMVNFVQSLVQ 260
PS S+ + + +++L+Q
Sbjct: 258 PS--HFSSDLKDLLRNLLQ 274
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 145/259 (55%), Gaps = 26/259 (10%)
Query: 9 QKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK-----KVLREK-MPNTI-ERDI 61
Q FD + + G+FG + LV+ K+S N + MK KV++ K + +T+ E+ I
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQ 121
+ P++V L +SF+D +++Y +MEYV GG+ + L G SE ARFY ++
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVL 152
Query: 122 AVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPE 181
+YLH L ++RD+KP+N+++ G++++TDFG A +V GR + GTPEY+APE
Sbjct: 153 TFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRV--KGRTWXL--CGTPEYLAPE 208
Query: 182 VLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSF 241
++ S GY + D W++GV+ YE+ G PF + Y I++ V F
Sbjct: 209 III-------SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS----GKVRF 257
Query: 242 PSSIRLSTAMVNFVQSLVQ 260
PS S+ + + +++L+Q
Sbjct: 258 PS--HFSSDLKDLLRNLLQ 274
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 143 bits (360), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 145/259 (55%), Gaps = 26/259 (10%)
Query: 9 QKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK-----KVLREK-MPNTI-ERDI 61
Q FD + + G+FG + LV+ K+S N + MK KV++ K + +T+ E+ I
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQ 121
+ P++V L +SF+D +++Y +MEYV GG+ + L G SE ARFY ++
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVL 152
Query: 122 AVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPE 181
+YLH L ++RD+KP+N+L+ G++++TDFG A +V GR + GTPEY+APE
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWXL--CGTPEYLAPE 208
Query: 182 VLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSF 241
++ S GY + D W++GV+ Y++ G PF + Y I++ V F
Sbjct: 209 IIL-------SKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVS----GKVRF 257
Query: 242 PSSIRLSTAMVNFVQSLVQ 260
PS S+ + + +++L+Q
Sbjct: 258 PS--HFSSDLKDLLRNLLQ 274
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 88/259 (33%), Positives = 145/259 (55%), Gaps = 26/259 (10%)
Query: 9 QKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK-----KVLREK-MPNTI-ERDI 61
Q FD + + G+FG + LV+ K+S N + MK KV++ K + +T+ E+ I
Sbjct: 22 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 81
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQ 121
+ P++V L +SF+D +++Y +MEYV GG+ + L G SE ARFY ++
Sbjct: 82 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVL 139
Query: 122 AVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPE 181
+YLH L ++RD+KP+N+L+ G++++TDFG A +V GR + GTPEY+APE
Sbjct: 140 TFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRV--KGRTWXL--CGTPEYLAPE 195
Query: 182 VLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSF 241
++ S GY + D W++GV+ YE+ G PF + Y I++ V F
Sbjct: 196 IIL-------SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS----GKVRF 244
Query: 242 PSSIRLSTAMVNFVQSLVQ 260
PS S+ + + +++L+Q
Sbjct: 245 PS--HFSSDLKDLLRNLLQ 261
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 144/259 (55%), Gaps = 26/259 (10%)
Query: 9 QKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK-----KVLREK-MPNTI-ERDI 61
Q FD + + G+FG + LV+ K+S N + MK KV++ K + +T+ E+ I
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQ 121
+ P++V L +SF+D +++Y +MEYV GG+ + L G E ARFY ++
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFXEPHARFYAAQIVL 152
Query: 122 AVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPE 181
+YLH L ++RD+KP+N+L+ G++++TDFG A +V GR + GTPEY+APE
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWXL--CGTPEYLAPE 208
Query: 182 VLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSF 241
++ S GY + D W++GV+ YE+ G PF + Y I++ V F
Sbjct: 209 IIL-------SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS----GKVRF 257
Query: 242 PSSIRLSTAMVNFVQSLVQ 260
PS S+ + + +++L+Q
Sbjct: 258 PS--HFSSDLKDLLRNLLQ 274
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 144/259 (55%), Gaps = 26/259 (10%)
Query: 9 QKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK-----KVLREK-MPNTI-ERDI 61
Q FD + + G+FG + LV+ K+S N + MK KV++ K + +T+ E+ I
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQ 121
+ P++V L +SF+D +++Y +MEYV GG+ + L G E ARFY ++
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFXEPHARFYAAQIVL 152
Query: 122 AVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPE 181
+YLH L ++RD+KP+N+L+ G++++TDFG A +V GR + GTPEY+APE
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWXL--CGTPEYLAPE 208
Query: 182 VLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSF 241
++ S GY + D W++GV+ YE+ G PF + Y I++ V F
Sbjct: 209 IIL-------SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS----GKVRF 257
Query: 242 PSSIRLSTAMVNFVQSLVQ 260
PS S+ + + +++L+Q
Sbjct: 258 PS--HFSSDLKDLLRNLLQ 274
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 142 bits (358), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 144/259 (55%), Gaps = 26/259 (10%)
Query: 9 QKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK-----KVLREK-MPNTI-ERDI 61
Q FD + + G+FG + LV+ K+S N + MK KV++ K + +T+ E+ I
Sbjct: 30 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 89
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQ 121
+ P++V L +SF+D +++Y +MEYV GG+ + L G E ARFY ++
Sbjct: 90 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFXEPHARFYAAQIVL 147
Query: 122 AVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPE 181
+YLH L ++RD+KP+N+L+ G++++TDFG A +V GR + GTPEY+APE
Sbjct: 148 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWXL--CGTPEYLAPE 203
Query: 182 VLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSF 241
++ S GY + D W++GV+ YE+ G PF + Y I++ V F
Sbjct: 204 IIL-------SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS----GKVRF 252
Query: 242 PSSIRLSTAMVNFVQSLVQ 260
PS S+ + + +++L+Q
Sbjct: 253 PS--HFSSDLKDLLRNLLQ 269
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 144/259 (55%), Gaps = 26/259 (10%)
Query: 9 QKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK-----KVLREK-MPNTI-ERDI 61
Q FD + + G+FG + LV+ K+S N + MK KV++ K + +T+ E+ I
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQ 121
+ P++V L +SF+D +++Y +MEYV GG+ + L G E ARFY ++
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFXEPHARFYAAQIVL 152
Query: 122 AVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPE 181
+YLH L ++RD+KP+N+L+ G++++TDFG A +V GR + GTPEY+APE
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWXL--CGTPEYLAPE 208
Query: 182 VLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSF 241
++ S GY + D W++GV+ YE+ G PF + Y I++ V F
Sbjct: 209 IIL-------SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS----GKVRF 257
Query: 242 PSSIRLSTAMVNFVQSLVQ 260
PS S+ + + +++L+Q
Sbjct: 258 PS--HFSSDLKDLLRNLLQ 274
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 144/259 (55%), Gaps = 26/259 (10%)
Query: 9 QKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK-----KVLREK-MPNTI-ERDI 61
Q FD + + G+FG + LV+ K+S N + MK KV++ K + +T+ E+ I
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQ 121
+ P++V L +SF+D +++Y +MEYV GG+ + L G SE ARFY ++
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVL 152
Query: 122 AVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPE 181
+YLH L ++RD+KP+N+L+ G++++TDFG A +V GR + GTPEY+AP
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWXL--CGTPEYLAPA 208
Query: 182 VLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSF 241
++ S GY + D W++GV+ YE+ G PF + Y I++ V F
Sbjct: 209 IIL-------SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS----GKVRF 257
Query: 242 PSSIRLSTAMVNFVQSLVQ 260
PS S+ + + +++L+Q
Sbjct: 258 PS--HFSSDLKDLLRNLLQ 274
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 144/259 (55%), Gaps = 26/259 (10%)
Query: 9 QKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK-----KVLREK-MPNTI-ERDI 61
Q FD + + G+FG + LV+ K+S N + MK KV++ K + +T+ E+ I
Sbjct: 56 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 115
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQ 121
+ P++V L +SF+D +++Y +MEYV GG+ + L G E ARFY ++
Sbjct: 116 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFXEPHARFYAAQIVL 173
Query: 122 AVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPE 181
+YLH L ++RD+KP+N+L+ G++++TDFG A +V GR + GTPEY+APE
Sbjct: 174 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWXL--CGTPEYLAPE 229
Query: 182 VLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSF 241
++ S GY + D W++GV+ YE+ G PF + Y I++ V F
Sbjct: 230 IIL-------SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS----GKVRF 278
Query: 242 PSSIRLSTAMVNFVQSLVQ 260
PS S+ + + +++L+Q
Sbjct: 279 PS--HFSSDLKDLLRNLLQ 295
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/259 (33%), Positives = 144/259 (55%), Gaps = 26/259 (10%)
Query: 9 QKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK-----KVLREK-MPNTI-ERDI 61
Q FD + + G+FG + LV+ K+S N + MK KV++ K + +T+ E+ I
Sbjct: 56 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 115
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQ 121
+ P++V L +SF+D +++Y +MEYV GG+ + L G SE ARFY ++
Sbjct: 116 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVL 173
Query: 122 AVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPE 181
+YLH L ++RD+KP+N+L+ G++++TDFG A +V + + GTPEY+APE
Sbjct: 174 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGATWTLCGTPEYLAPE 229
Query: 182 VLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSF 241
++ S GY + D W++GV+ YE+ G PF + Y I++ V F
Sbjct: 230 IIL-------SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS----GKVRF 278
Query: 242 PSSIRLSTAMVNFVQSLVQ 260
PS S+ + + +++L+Q
Sbjct: 279 PS--HFSSDLKDLLRNLLQ 295
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 157/309 (50%), Gaps = 34/309 (11%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK-----KVLREKMPNTI--ERDIMVKS-K 66
SDF + I +G+FG + L K + +K +L++K I ER++++K+ K
Sbjct: 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVK 97
Query: 67 CPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYL 126
P++V L +SFQ + +YF+++Y+ GG+ L+ + +L E +ARFY E+A A+ YL
Sbjct: 98 HPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRE-RCFL-EPRARFYAAEIASALGYL 155
Query: 127 HGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQ-VDKNGRIKSIVPVGTPEYVAPEVLEW 185
H L V+RD+KP+N+LL + GH+ LTDFG + ++ N + GTPEY+APEVL
Sbjct: 156 HSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTF--CGTPEYLAPEVLH- 212
Query: 186 MEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSI 245
Y + D W +G V YE+L G PF Y +IL + + +S
Sbjct: 213 ------KQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNSA 266
Query: 246 RLSTAMVNFVQSLVQK-----LDARLNMDQVLGHPVFDCLDSDPPC---IPPPSQENKFH 297
R + ++ L+QK L A+ + ++ H F ++ D I PP N
Sbjct: 267 R------HLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLINWDDLINKKITPPFNPNVSG 320
Query: 298 KKDKRKASP 306
D R P
Sbjct: 321 PNDLRHFDP 329
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/242 (34%), Positives = 140/242 (57%), Gaps = 26/242 (10%)
Query: 26 GNFGDIYLVEEKQSHNTFVMK-----KVLREK-MPNTI-ERDIMVKSKCPYIVNLFYSFQ 78
G+FG + LV+ K++ N + MK KV++ K + +T+ E+ I+ P++V L +SF+
Sbjct: 53 GSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 112
Query: 79 DMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKP 138
D +++Y +MEYV GG+ + L G SE ARFY ++ +YLH L ++RD+KP
Sbjct: 113 DNSNLYMVMEYVPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKP 170
Query: 139 DNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGS 198
+N+L+ G++++TDFG A +V GR + GTPEY+APE++ S GY +
Sbjct: 171 ENLLIDQQGYIQVTDFGFAKRV--KGRTWXL--CGTPEYLAPEIIL-------SKGYNKA 219
Query: 199 CDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRLSTAMVNFVQSL 258
D W++GV+ YE+ G PF + Y I++ V FPS S+ + + +++L
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS----GKVRFPS--HFSSDLKDLLRNL 273
Query: 259 VQ 260
+Q
Sbjct: 274 LQ 275
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/242 (34%), Positives = 140/242 (57%), Gaps = 26/242 (10%)
Query: 26 GNFGDIYLVEEKQSHNTFVMK-----KVLREK-MPNTI-ERDIMVKSKCPYIVNLFYSFQ 78
G+FG + LV+ K++ N + MK KV++ K + +T+ E+ I+ P++V L +SF+
Sbjct: 53 GSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 112
Query: 79 DMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKP 138
D +++Y +MEYV GG+ + L G SE ARFY ++ +YLH L ++RD+KP
Sbjct: 113 DNSNLYMVMEYVPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKP 170
Query: 139 DNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGS 198
+N+L+ G++++TDFG A +V GR + GTPEY+APE++ S GY +
Sbjct: 171 ENLLIDQQGYIQVTDFGFAKRV--KGRTWXL--CGTPEYLAPEIIL-------SKGYNKA 219
Query: 199 CDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRLSTAMVNFVQSL 258
D W++GV+ YE+ G PF + Y I++ V FPS S+ + + +++L
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS----GKVRFPS--HFSSDLKDLLRNL 273
Query: 259 VQ 260
+Q
Sbjct: 274 LQ 275
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 144/259 (55%), Gaps = 26/259 (10%)
Query: 9 QKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK-----KVLREK-MPNTI-ERDI 61
Q FD + + G+FG + LV+ K+S N + MK KV++ K + +T+ E+ I
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQ 121
+ P++V L +SF+D +++Y +MEYV GG+ + L G SE ARFY ++
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVL 152
Query: 122 AVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPE 181
+YLH L ++RD+KP+N+L+ G++++TDFG A +V GR + GTPE +APE
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWXL--CGTPEALAPE 208
Query: 182 VLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSF 241
++ S GY + D W++GV+ YE+ G PF + Y I++ V F
Sbjct: 209 IIL-------SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS----GKVRF 257
Query: 242 PSSIRLSTAMVNFVQSLVQ 260
PS S+ + + +++L+Q
Sbjct: 258 PS--HFSSDLKDLLRNLLQ 274
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/242 (34%), Positives = 140/242 (57%), Gaps = 26/242 (10%)
Query: 26 GNFGDIYLVEEKQSHNTFVMK-----KVLREK-MPNTI-ERDIMVKSKCPYIVNLFYSFQ 78
G+FG + LV+ K++ N + MK KV++ K + +T+ E+ I+ P++V L +SF+
Sbjct: 53 GSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 112
Query: 79 DMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKP 138
D +++Y +MEYV GG+ + L G SE ARFY ++ +YLH L ++RD+KP
Sbjct: 113 DNSNLYMVMEYVPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKP 170
Query: 139 DNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGS 198
+N+L+ G++++TDFG A +V GR + GTPEY+APE++ S GY +
Sbjct: 171 ENLLIDQQGYIQVTDFGFAKRV--KGRTWXL--CGTPEYLAPEIIL-------SKGYNKA 219
Query: 199 CDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRLSTAMVNFVQSL 258
D W++GV+ YE+ G PF + Y I++ V FPS S+ + + +++L
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS----GKVRFPS--HFSSDLKDLLRNL 273
Query: 259 VQ 260
+Q
Sbjct: 274 LQ 275
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/242 (34%), Positives = 140/242 (57%), Gaps = 26/242 (10%)
Query: 26 GNFGDIYLVEEKQSHNTFVMK-----KVLREK-MPNTI-ERDIMVKSKCPYIVNLFYSFQ 78
G+FG + LV+ K++ N + MK KV++ K + +T+ E+ I+ P++V L +SF+
Sbjct: 73 GSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 132
Query: 79 DMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKP 138
D +++Y +MEYV GG+ + L G SE ARFY ++ +YLH L ++RD+KP
Sbjct: 133 DNSNLYMVMEYVPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKP 190
Query: 139 DNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGS 198
+N+L+ G++++TDFG A +V GR + GTPEY+APE++ S GY +
Sbjct: 191 ENLLIDQQGYIQVTDFGFAKRV--KGRTWXL--CGTPEYLAPEIIL-------SKGYNKA 239
Query: 199 CDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRLSTAMVNFVQSL 258
D W++GV+ YE+ G PF + Y I++ V FPS S+ + + +++L
Sbjct: 240 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS----GKVRFPS--HFSSDLKDLLRNL 293
Query: 259 VQ 260
+Q
Sbjct: 294 LQ 295
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/242 (34%), Positives = 140/242 (57%), Gaps = 26/242 (10%)
Query: 26 GNFGDIYLVEEKQSHNTFVMK-----KVLREK-MPNTI-ERDIMVKSKCPYIVNLFYSFQ 78
G+FG + LV+ K++ N + MK KV++ K + +T+ E+ I+ P++V L +SF+
Sbjct: 45 GSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 104
Query: 79 DMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKP 138
D +++Y +MEYV GG+ + L G SE ARFY ++ +YLH L ++RD+KP
Sbjct: 105 DNSNLYMVMEYVPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKP 162
Query: 139 DNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGS 198
+N+L+ G++++TDFG A +V GR + GTPEY+APE++ S GY +
Sbjct: 163 ENLLIDQQGYIQVTDFGFAKRV--KGRTWXL--CGTPEYLAPEIIL-------SKGYNKA 211
Query: 199 CDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRLSTAMVNFVQSL 258
D W++GV+ YE+ G PF + Y I++ V FPS S+ + + +++L
Sbjct: 212 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS----GKVRFPS--HFSSDLKDLLRNL 265
Query: 259 VQ 260
+Q
Sbjct: 266 LQ 267
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 139/242 (57%), Gaps = 26/242 (10%)
Query: 26 GNFGDIYLVEEKQSHNTFVMK-----KVLREK-MPNTI-ERDIMVKSKCPYIVNLFYSFQ 78
G+FG + LV+ K++ N + MK KV++ K + +T+ E+ I+ P++V L +SF+
Sbjct: 53 GSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 112
Query: 79 DMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKP 138
D +++Y +MEY GG+ + L G SE ARFY ++ +YLH L ++RD+KP
Sbjct: 113 DNSNLYMVMEYAPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKP 170
Query: 139 DNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGS 198
+N+++ G++K+TDFG A +V GR + GTPEY+APE++ S GY +
Sbjct: 171 ENLMIDQQGYIKVTDFGFAKRV--KGRTWXL--CGTPEYLAPEIIL-------SKGYNKA 219
Query: 199 CDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRLSTAMVNFVQSL 258
D W++GV+ YE+ G PF + Y I++ V FPS S+ + + +++L
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS----GKVRFPS--HFSSDLKDLLRNL 273
Query: 259 VQ 260
+Q
Sbjct: 274 LQ 275
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 84/245 (34%), Positives = 139/245 (56%), Gaps = 26/245 (10%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMK-----KVLREK-MPNTI-ERDIMVKSKCPYIVNLFY 75
I G+FG + LV+ ++ N + MK KV++ K + +T+ E+ I+ P++V L +
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
SF+D +++Y +MEY+ GGD + L G SE ARFY ++ +YLH L ++RD
Sbjct: 109 SFKDNSNLYMVMEYMPGGDMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGY 195
+KP+N+L+ G++K+ DFG A +V GR + GTPEY+APE++ S GY
Sbjct: 167 LKPENLLIDQQGYIKVADFGFAKRV--KGRTWXL--CGTPEYLAPEIIL-------SKGY 215
Query: 196 TGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRLSTAMVNFV 255
+ D W++GV+ YE+ G PF + Y I++ V FPS S+ + + +
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS----GKVRFPS--HFSSDLKDLL 269
Query: 256 QSLVQ 260
++L+Q
Sbjct: 270 RNLLQ 274
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 84/245 (34%), Positives = 139/245 (56%), Gaps = 26/245 (10%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMK-----KVLREK-MPNTI-ERDIMVKSKCPYIVNLFY 75
I G+FG + LV+ ++ N + MK KV++ K + +T+ E+ I+ P++V L +
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
SF+D +++Y +MEY+ GGD + L G SE ARFY ++ +YLH L ++RD
Sbjct: 109 SFKDNSNLYMVMEYMPGGDMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGY 195
+KP+N+L+ G++K+ DFG A +V GR + GTPEY+APE++ S GY
Sbjct: 167 LKPENLLIDQQGYIKVADFGFAKRV--KGRTWXL--CGTPEYLAPEIIL-------SKGY 215
Query: 196 TGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRLSTAMVNFV 255
+ D W++GV+ YE+ G PF + Y I++ V FPS S+ + + +
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS----GKVRFPS--HFSSDLKDLL 269
Query: 256 QSLVQ 260
++L+Q
Sbjct: 270 RNLLQ 274
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 98/315 (31%), Positives = 155/315 (49%), Gaps = 48/315 (15%)
Query: 11 NVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMV------- 63
++ DFD+ R I +G++ + LV K++ + MK V +E + + + D +
Sbjct: 16 SLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFE 75
Query: 64 -KSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQA 122
S P++V L FQ + ++F++EYV GGD + ++ Q L E ARFY E++ A
Sbjct: 76 QASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK--LPEEHARFYSAEISLA 133
Query: 123 VQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV 182
+ YLH G ++RD+K DN+LL + GH+KLTD+G + + G S GTP Y+APE+
Sbjct: 134 LNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXF-CGTPNYIAPEI 192
Query: 183 LEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNY---------ETLDMTYSSILAC 233
L G D Y S D W++GV+ +E++ G +PF+ T D + IL
Sbjct: 193 L------RGED-YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVIL-- 243
Query: 234 DTEDTVSFPSSIRLSTAMVNFVQSLVQK-------LDARLNMDQVLGHPVFDCLDSD--- 283
E + P S+ + A V ++S + K + + GHP F +D D
Sbjct: 244 --EKQIRIPRSMSVKAASV--LKSFLNKDPKERLGCLPQTGFADIQGHPFFRNVDWDMME 299
Query: 284 -----PPCIPPPSQE 293
PP P S E
Sbjct: 300 QKQVVPPFKPNISGE 314
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 155/315 (49%), Gaps = 48/315 (15%)
Query: 11 NVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMV------- 63
++ DFD+ R I +G++ + LV K++ + M+ V +E + + + D +
Sbjct: 48 SLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFE 107
Query: 64 -KSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQA 122
S P++V L FQ + ++F++EYV GGD + ++ Q L E ARFY E++ A
Sbjct: 108 QASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK--LPEEHARFYSAEISLA 165
Query: 123 VQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV 182
+ YLH G ++RD+K DN+LL + GH+KLTD+G + + G S GTP Y+APE+
Sbjct: 166 LNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTF-CGTPNYIAPEI 224
Query: 183 LEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNY---------ETLDMTYSSILAC 233
L G D Y S D W++GV+ +E++ G +PF+ T D + IL
Sbjct: 225 L------RGED-YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVIL-- 275
Query: 234 DTEDTVSFPSSIRLSTAMVNFVQSLVQK-------LDARLNMDQVLGHPVFDCLDSD--- 283
E + P S+ + A V ++S + K + + GHP F +D D
Sbjct: 276 --EKQIRIPRSLSVKAASV--LKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMME 331
Query: 284 -----PPCIPPPSQE 293
PP P S E
Sbjct: 332 QKQVVPPFKPNISGE 346
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 140/242 (57%), Gaps = 26/242 (10%)
Query: 26 GNFGDIYLVEEKQSHNTFVMK-----KVLREK-MPNTI-ERDIMVKSKCPYIVNLFYSFQ 78
G+FG + LV+ ++ N + MK KV++ K + +T+ E+ I+ P++V L +SF+
Sbjct: 53 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 112
Query: 79 DMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKP 138
D +++Y +MEYV GG+ + L G SE ARFY ++ +YLH L ++RD+KP
Sbjct: 113 DNSNLYMVMEYVPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKP 170
Query: 139 DNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGS 198
+N+L+ G++++TDFG A +V GR ++ GTPEY+APE++ S GY +
Sbjct: 171 ENLLIDQQGYIQVTDFGFAKRV--KGRTWTL--CGTPEYLAPEIIL-------SKGYNKA 219
Query: 199 CDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRLSTAMVNFVQSL 258
D W++GV+ YE+ G PF + Y I++ V FPS S+ + + +++L
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS----GKVRFPS--HFSSDLKDLLRNL 273
Query: 259 VQ 260
+Q
Sbjct: 274 LQ 275
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 98/315 (31%), Positives = 155/315 (49%), Gaps = 48/315 (15%)
Query: 11 NVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMV------- 63
++ DFD+ R I +G++ + LV K++ + MK V +E + + + D +
Sbjct: 1 SLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFE 60
Query: 64 -KSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQA 122
S P++V L FQ + ++F++EYV GGD + ++ Q L E ARFY E++ A
Sbjct: 61 QASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK--LPEEHARFYSAEISLA 118
Query: 123 VQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV 182
+ YLH G ++RD+K DN+LL + GH+KLTD+G + + G S GTP Y+APE+
Sbjct: 119 LNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXF-CGTPNYIAPEI 177
Query: 183 LEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNY---------ETLDMTYSSILAC 233
L G D Y S D W++GV+ +E++ G +PF+ T D + IL
Sbjct: 178 LR------GED-YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVIL-- 228
Query: 234 DTEDTVSFPSSIRLSTAMVNFVQSLVQK-------LDARLNMDQVLGHPVFDCLDSD--- 283
E + P S+ + A V ++S + K + + GHP F +D D
Sbjct: 229 --EKQIRIPRSLSVKAASV--LKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMME 284
Query: 284 -----PPCIPPPSQE 293
PP P S E
Sbjct: 285 QKQVVPPFKPNISGE 299
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 84/245 (34%), Positives = 139/245 (56%), Gaps = 26/245 (10%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMK-----KVLREK-MPNTI-ERDIMVKSKCPYIVNLFY 75
I G+FG + LV+ ++ N + MK KV++ K + +T+ E+ I+ P++V L +
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
SF+D +++Y +MEYV GG+ + L G SE ARFY ++ +YLH L ++RD
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGY 195
+KP+N+L+ G++K+ DFG A +V GR + GTPEY+APE++ S GY
Sbjct: 167 LKPENLLIDQQGYIKVADFGFAKRV--KGRTWXL--CGTPEYLAPEIIL-------SKGY 215
Query: 196 TGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRLSTAMVNFV 255
+ D W++GV+ YE+ G PF + Y I++ V FPS S+ + + +
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS----GKVRFPS--HFSSDLKDLL 269
Query: 256 QSLVQ 260
++L+Q
Sbjct: 270 RNLLQ 274
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 139/242 (57%), Gaps = 26/242 (10%)
Query: 26 GNFGDIYLVEEKQSHNTFVMK-----KVLREK-MPNTI-ERDIMVKSKCPYIVNLFYSFQ 78
G+FG + LV+ ++ N + MK KV++ K + +T+ E+ I+ P++V L +SF+
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 79 DMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKP 138
D +++Y +MEYV GG+ + L G SE ARFY ++ +YLH L ++RD+KP
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKP 169
Query: 139 DNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGS 198
+N+L+ G++++TDFG A +V GR + GTPEY+APE++ S GY +
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRV--KGRTWXL--CGTPEYLAPEIIL-------SKGYNKA 218
Query: 199 CDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRLSTAMVNFVQSL 258
D W++GV+ YE+ G PF + Y I++ V FPS S+ + + +++L
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS----GKVRFPS--HFSSDLKDLLRNL 272
Query: 259 VQ 260
+Q
Sbjct: 273 LQ 274
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 139/242 (57%), Gaps = 26/242 (10%)
Query: 26 GNFGDIYLVEEKQSHNTFVMK-----KVLREK-MPNTI-ERDIMVKSKCPYIVNLFYSFQ 78
G+FG + LV+ K++ N + MK KV++ K + +T+ E+ I+ P++V L +SF+
Sbjct: 45 GSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 104
Query: 79 DMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKP 138
D +++Y +MEYV GG+ + L G E ARFY ++ +YLH L ++RD+KP
Sbjct: 105 DNSNLYMVMEYVPGGEMFSHLRRI--GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKP 162
Query: 139 DNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGS 198
+N+L+ G++++TDFG A +V GR + GTPEY+APE++ S GY +
Sbjct: 163 ENLLIDQQGYIQVTDFGFAKRV--KGRTWXL--CGTPEYLAPEIIL-------SKGYNKA 211
Query: 199 CDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRLSTAMVNFVQSL 258
D W++GV+ YE+ G PF + Y I++ V FPS S+ + + +++L
Sbjct: 212 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS----GKVRFPS--HFSSDLKDLLRNL 265
Query: 259 VQ 260
+Q
Sbjct: 266 LQ 267
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 139/242 (57%), Gaps = 26/242 (10%)
Query: 26 GNFGDIYLVEEKQSHNTFVMK-----KVLREK-MPNTI-ERDIMVKSKCPYIVNLFYSFQ 78
G+FG + LV+ ++ N + MK KV++ K + +T+ E+ I+ P++V L +SF+
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 79 DMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKP 138
D +++Y +MEYV GG+ + L G SE ARFY ++ +YLH L ++RD+KP
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKP 169
Query: 139 DNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGS 198
+N+L+ G++++TDFG A +V GR + GTPEY+APE++ S GY +
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRV--KGRTWXL--CGTPEYLAPEIIL-------SKGYNKA 218
Query: 199 CDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRLSTAMVNFVQSL 258
D W++GV+ YE+ G PF + Y I++ V FPS S+ + + +++L
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS----GKVRFPS--HFSSDLKDLLRNL 272
Query: 259 VQ 260
+Q
Sbjct: 273 LQ 274
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 139/242 (57%), Gaps = 26/242 (10%)
Query: 26 GNFGDIYLVEEKQSHNTFVMK-----KVLREK-MPNTI-ERDIMVKSKCPYIVNLFYSFQ 78
G+FG + LV+ ++ N + MK KV++ K + +T+ E+ I+ P++V L +SF+
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 79 DMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKP 138
D +++Y +MEYV GG+ + L G SE ARFY ++ +YLH L ++RD+KP
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKP 169
Query: 139 DNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGS 198
+N+L+ G++++TDFG A +V GR + GTPEY+APE++ S GY +
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRV--KGRTWXL--CGTPEYLAPEIIL-------SKGYNKA 218
Query: 199 CDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRLSTAMVNFVQSL 258
D W++GV+ YE+ G PF + Y I++ V FPS S+ + + +++L
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS----GKVRFPS--HFSSDLKDLLRNL 272
Query: 259 VQ 260
+Q
Sbjct: 273 LQ 274
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 139/242 (57%), Gaps = 26/242 (10%)
Query: 26 GNFGDIYLVEEKQSHNTFVMK-----KVLREK-MPNTI-ERDIMVKSKCPYIVNLFYSFQ 78
G+FG + LV+ ++ N + MK KV++ K + +T+ E+ I+ P++V L +SF+
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 79 DMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKP 138
D +++Y +MEYV GG+ + L G SE ARFY ++ +YLH L ++RD+KP
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKP 169
Query: 139 DNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGS 198
+N+L+ G++++TDFG A +V GR + GTPEY+APE++ S GY +
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRV--KGRTWXL--CGTPEYLAPEIIL-------SKGYNKA 218
Query: 199 CDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRLSTAMVNFVQSL 258
D W++GV+ YE+ G PF + Y I++ V FPS S+ + + +++L
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS----GKVRFPS--HFSSDLKDLLRNL 272
Query: 259 VQ 260
+Q
Sbjct: 273 LQ 274
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 139/242 (57%), Gaps = 26/242 (10%)
Query: 26 GNFGDIYLVEEKQSHNTFVMK-----KVLREK-MPNTI-ERDIMVKSKCPYIVNLFYSFQ 78
G+FG + LV+ ++ N + MK KV++ K + +T+ E+ I+ P++V L +SF+
Sbjct: 53 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 112
Query: 79 DMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKP 138
D +++Y +MEYV GG+ + L G SE ARFY ++ +YLH L ++RD+KP
Sbjct: 113 DNSNLYMVMEYVPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKP 170
Query: 139 DNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGS 198
+N+L+ G++++TDFG A +V GR + GTPEY+APE++ S GY +
Sbjct: 171 ENLLIDQQGYIQVTDFGFAKRV--KGRTWXL--CGTPEYLAPEIIL-------SKGYNKA 219
Query: 199 CDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRLSTAMVNFVQSL 258
D W++GV+ YE+ G PF + Y I++ V FPS S+ + + +++L
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS----GKVRFPS--HFSSDLKDLLRNL 273
Query: 259 VQ 260
+Q
Sbjct: 274 LQ 275
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 131/241 (54%), Gaps = 21/241 (8%)
Query: 12 VSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKK------VLREKMPNTI-ERDIMVK 64
V+ +DFD + + +G FG + LV EK + + MK + ++++ +T+ E ++
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 65 SKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQ 124
++ P++ L Y+FQ + + F+MEY GG+ L + +E +ARFY E+ A++
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER--VFTEERARFYGAEIVSALE 119
Query: 125 YLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLE 184
YLH V+RDIK +N++L GH+K+TDFG + +G GTPEY+APEVLE
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXF-CGTPEYLAPEVLE 178
Query: 185 WMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSS 244
+ Y + D W +GVV YE++ G PF + + + IL + + FP +
Sbjct: 179 -------DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM----EEIRFPRT 227
Query: 245 I 245
+
Sbjct: 228 L 228
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 140/242 (57%), Gaps = 26/242 (10%)
Query: 26 GNFGDIYLVEEKQSHNTFVMK-----KVLREK-MPNTI-ERDIMVKSKCPYIVNLFYSFQ 78
G+FG + LV+ ++ N + MK KV++ K + +T+ E+ I+ P++V L +SF+
Sbjct: 38 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 97
Query: 79 DMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKP 138
D +++Y +MEYV GG+ + L G SE ARFY ++ +YLH L ++RD+KP
Sbjct: 98 DNSNLYMVMEYVPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKP 155
Query: 139 DNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGS 198
+N+L+ G++++TDFG A +V GR ++ GTPEY+APE++ S GY +
Sbjct: 156 ENLLIDQQGYIQVTDFGFAKRV--KGRTWTL--CGTPEYLAPEIIL-------SKGYNKA 204
Query: 199 CDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRLSTAMVNFVQSL 258
D W++GV+ YE+ G PF + Y I++ V FPS S+ + + +++L
Sbjct: 205 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS----GKVRFPS--HFSSDLKDLLRNL 258
Query: 259 VQ 260
+Q
Sbjct: 259 LQ 260
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/244 (31%), Positives = 132/244 (54%), Gaps = 21/244 (8%)
Query: 9 QKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKK------VLREKMPNTI-ERDI 61
+ V+ +DFD + + +G FG + LV EK + + MK + ++++ +T+ E +
Sbjct: 2 RAKVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRV 61
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQ 121
+ ++ P++ L Y+FQ + + F+MEY GG+ L + +E +ARFY E+
Sbjct: 62 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER--VFTEERARFYGAEIVS 119
Query: 122 AVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPE 181
A++YLH V+RDIK +N++L GH+K+TDFG + +G GTPEY+APE
Sbjct: 120 ALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTF-CGTPEYLAPE 178
Query: 182 VLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSF 241
VLE + Y + D W +GVV YE++ G PF + + + IL + + F
Sbjct: 179 VLE-------DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM----EEIRF 227
Query: 242 PSSI 245
P ++
Sbjct: 228 PRTL 231
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 131/241 (54%), Gaps = 21/241 (8%)
Query: 12 VSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKK------VLREKMPNTI-ERDIMVK 64
V+ +DFD + + +G FG + LV EK + + MK + ++++ +T+ E ++
Sbjct: 7 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 66
Query: 65 SKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQ 124
++ P++ L Y+FQ + + F+MEY GG+ L + +E +ARFY E+ A++
Sbjct: 67 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER--VFTEERARFYGAEIVSALE 124
Query: 125 YLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLE 184
YLH V+RDIK +N++L GH+K+TDFG + +G GTPEY+APEVLE
Sbjct: 125 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXF-CGTPEYLAPEVLE 183
Query: 185 WMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSS 244
+ Y + D W +GVV YE++ G PF + + + IL + + FP +
Sbjct: 184 -------DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM----EEIRFPRT 232
Query: 245 I 245
+
Sbjct: 233 L 233
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/314 (31%), Positives = 154/314 (49%), Gaps = 48/314 (15%)
Query: 12 VSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMV-------- 63
+ DFD+ R I +G++ + LV K++ + MK V +E + + + D +
Sbjct: 6 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 65
Query: 64 KSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAV 123
S P++V L FQ + ++F++EYV GGD + ++ Q L E ARFY E++ A+
Sbjct: 66 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK--LPEEHARFYSAEISLAL 123
Query: 124 QYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVL 183
YLH G ++RD+K DN+LL + GH+KLTD+G + + G S GTP Y+APE+L
Sbjct: 124 NYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXF-CGTPNYIAPEIL 182
Query: 184 EWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNY---------ETLDMTYSSILACD 234
G D Y S D W++GV+ +E++ G +PF+ T D + IL
Sbjct: 183 R------GED-YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVIL--- 232
Query: 235 TEDTVSFPSSIRLSTAMVNFVQSLVQK-------LDARLNMDQVLGHPVFDCLDSD---- 283
E + P S+ + A V ++S + K + + GHP F +D D
Sbjct: 233 -EKQIRIPRSLSVKAASV--LKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQ 289
Query: 284 ----PPCIPPPSQE 293
PP P S E
Sbjct: 290 KQVVPPFKPNISGE 303
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 131/241 (54%), Gaps = 21/241 (8%)
Query: 12 VSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKK------VLREKMPNTI-ERDIMVK 64
V+ +DFD + + +G FG + LV EK + + MK + ++++ +T+ E ++
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 65 SKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQ 124
++ P++ L Y+FQ + + F+MEY GG+ L + +E +ARFY E+ A++
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER--VFTEERARFYGAEIVSALE 119
Query: 125 YLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLE 184
YLH V+RDIK +N++L GH+K+TDFG + +G GTPEY+APEVLE
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXF-CGTPEYLAPEVLE 178
Query: 185 WMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSS 244
+ Y + D W +GVV YE++ G PF + + + IL + + FP +
Sbjct: 179 -------DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM----EEIRFPRT 227
Query: 245 I 245
+
Sbjct: 228 L 228
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/259 (32%), Positives = 142/259 (54%), Gaps = 26/259 (10%)
Query: 9 QKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK-----KVLREK-MPNTI-ERDI 61
Q F+ R + G+FG + LV+ K++ N + MK KV++ K + +T+ E+ I
Sbjct: 36 QNTAHLDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 95
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQ 121
P++V L +SF+D +++Y ++EY GG+ + L G SE ARFY ++
Sbjct: 96 QQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRI--GRFSEPHARFYAAQIVL 153
Query: 122 AVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPE 181
+YLH L ++RD+KP+N+L+ G++K+ DFG A +V GR + GTPEY+APE
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV--KGRTWXL--CGTPEYLAPE 209
Query: 182 VLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSF 241
++ S GY + D W++GV+ YE+ G PF + Y I++ V F
Sbjct: 210 IIL-------SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS----GKVRF 258
Query: 242 PSSIRLSTAMVNFVQSLVQ 260
PS S+ + + +++L+Q
Sbjct: 259 PS--HFSSDLKDLLRNLLQ 275
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 131/241 (54%), Gaps = 21/241 (8%)
Query: 12 VSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKK------VLREKMPNTI-ERDIMVK 64
V+ +DFD + + +G FG + LV EK + + MK + ++++ +T+ E ++
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 65 SKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQ 124
++ P++ L Y+FQ + + F+MEY GG+ L + +E +ARFY E+ A++
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALE 119
Query: 125 YLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLE 184
YLH V+RDIK +N++L GH+K+TDFG + +G GTPEY+APEVLE
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTF-CGTPEYLAPEVLE 178
Query: 185 WMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSS 244
+ Y + D W +GVV YE++ G PF + + + IL + + FP +
Sbjct: 179 -------DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM----EEIRFPRT 227
Query: 245 I 245
+
Sbjct: 228 L 228
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 138/242 (57%), Gaps = 26/242 (10%)
Query: 26 GNFGDIYLVEEKQSHNTFVMK-----KVLREK-MPNTI-ERDIMVKSKCPYIVNLFYSFQ 78
G+FG + LV+ ++ N + MK KV++ K + +T+ E+ I+ P++V L +SF+
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 79 DMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKP 138
D +++Y +MEY GG+ + L G SE ARFY ++ +YLH L ++RD+KP
Sbjct: 112 DNSNLYMVMEYAPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKP 169
Query: 139 DNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGS 198
+N+++ G++K+TDFG A +V GR + GTPEY+APE++ S GY +
Sbjct: 170 ENLMIDQQGYIKVTDFGFAKRV--KGRTWXL--CGTPEYLAPEIIL-------SKGYNKA 218
Query: 199 CDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRLSTAMVNFVQSL 258
D W++GV+ YE+ G PF + Y I++ V FPS S+ + + +++L
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS----GKVRFPS--HFSSDLKDLLRNL 272
Query: 259 VQ 260
+Q
Sbjct: 273 LQ 274
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 131/241 (54%), Gaps = 21/241 (8%)
Query: 12 VSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKK------VLREKMPNTI-ERDIMVK 64
V+ +DFD + + +G FG + LV EK + + MK + ++++ +T+ E ++
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 65 SKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQ 124
++ P++ L Y+FQ + + F+MEY GG+ L + +E +ARFY E+ A++
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER--VFTEERARFYGAEIVSALE 119
Query: 125 YLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLE 184
YLH V+RDIK +N++L GH+K+TDFG + +G GTPEY+APEVLE
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTF-CGTPEYLAPEVLE 178
Query: 185 WMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSS 244
+ Y + D W +GVV YE++ G PF + + + IL + + FP +
Sbjct: 179 -------DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM----EEIRFPRT 227
Query: 245 I 245
+
Sbjct: 228 L 228
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 138/242 (57%), Gaps = 26/242 (10%)
Query: 26 GNFGDIYLVEEKQSHNTFVMK-----KVLREK-MPNTI-ERDIMVKSKCPYIVNLFYSFQ 78
G+FG + LV+ ++ N + MK KV++ K + +T+ E+ I+ P++V L +SF+
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 79 DMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKP 138
D +++Y +MEY GG+ + L G SE ARFY ++ +YLH L ++RD+KP
Sbjct: 112 DNSNLYMVMEYAPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKP 169
Query: 139 DNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGS 198
+N+++ G++K+TDFG A +V GR + GTPEY+APE++ S GY +
Sbjct: 170 ENLMIDQQGYIKVTDFGLAKRV--KGRTWXL--CGTPEYLAPEIIL-------SKGYNKA 218
Query: 199 CDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRLSTAMVNFVQSL 258
D W++GV+ YE+ G PF + Y I++ V FPS S+ + + +++L
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS----GKVRFPS--HFSSDLKDLLRNL 272
Query: 259 VQ 260
+Q
Sbjct: 273 LQ 274
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 131/241 (54%), Gaps = 21/241 (8%)
Query: 12 VSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKK------VLREKMPNTI-ERDIMVK 64
V+ +DFD + + +G FG + LV EK + + MK + ++++ +T+ E ++
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 65 SKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQ 124
++ P++ L Y+FQ + + F+MEY GG+ L + +E +ARFY E+ A++
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALE 119
Query: 125 YLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLE 184
YLH V+RDIK +N++L GH+K+TDFG + +G GTPEY+APEVLE
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXF-CGTPEYLAPEVLE 178
Query: 185 WMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSS 244
+ Y + D W +GVV YE++ G PF + + + IL + + FP +
Sbjct: 179 -------DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM----EEIRFPRT 227
Query: 245 I 245
+
Sbjct: 228 L 228
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 138/242 (57%), Gaps = 26/242 (10%)
Query: 26 GNFGDIYLVEEKQSHNTFVMK-----KVLREK-MPNTI-ERDIMVKSKCPYIVNLFYSFQ 78
G+FG + LV+ ++ N + MK KV++ K + +T+ E+ I+ P++V L +SF+
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 79 DMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKP 138
D +++Y +MEYV GG+ + L G E ARFY ++ +YLH L ++RD+KP
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRI--GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKP 169
Query: 139 DNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGS 198
+N+L+ G++++TDFG A +V GR + GTPEY+APE++ S GY +
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRV--KGRTWXL--CGTPEYLAPEIIL-------SKGYNKA 218
Query: 199 CDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRLSTAMVNFVQSL 258
D W++GV+ YE+ G PF + Y I++ V FPS S+ + + +++L
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS----GKVRFPS--HFSSDLKDLLRNL 272
Query: 259 VQ 260
+Q
Sbjct: 273 LQ 274
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 138/242 (57%), Gaps = 26/242 (10%)
Query: 26 GNFGDIYLVEEKQSHNTFVMK-----KVLREK-MPNTI-ERDIMVKSKCPYIVNLFYSFQ 78
G+FG + LV+ ++ N + MK KV++ K + +T+ E+ I+ P++V L +SF+
Sbjct: 53 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 112
Query: 79 DMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKP 138
D +++Y +MEYV GG+ + L G E ARFY ++ +YLH L ++RD+KP
Sbjct: 113 DNSNLYMVMEYVPGGEMFSHLRRI--GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKP 170
Query: 139 DNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGS 198
+N+L+ G++++TDFG A +V GR + GTPEY+APE++ S GY +
Sbjct: 171 ENLLIDQQGYIQVTDFGFAKRV--KGRTWXL--CGTPEYLAPEIIL-------SKGYNKA 219
Query: 199 CDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRLSTAMVNFVQSL 258
D W++GV+ YE+ G PF + Y I++ V FPS S+ + + +++L
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS----GKVRFPS--HFSSDLKDLLRNL 273
Query: 259 VQ 260
+Q
Sbjct: 274 LQ 275
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 138/242 (57%), Gaps = 26/242 (10%)
Query: 26 GNFGDIYLVEEKQSHNTFVMK-----KVLREK-MPNTI-ERDIMVKSKCPYIVNLFYSFQ 78
G+FG + LV+ ++ N + MK KV++ K + +T+ E+ I+ P++V L +SF+
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 79 DMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKP 138
D +++Y +MEYV GG+ + L G E ARFY ++ +YLH L ++RD+KP
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRI--GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKP 169
Query: 139 DNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGS 198
+N+L+ G++++TDFG A +V GR + GTPEY+APE++ S GY +
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRV--KGRTWXL--CGTPEYLAPEIIL-------SKGYNKA 218
Query: 199 CDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRLSTAMVNFVQSL 258
D W++GV+ YE+ G PF + Y I++ V FPS S+ + + +++L
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS----GKVRFPS--HFSSDLKDLLRNL 272
Query: 259 VQ 260
+Q
Sbjct: 273 LQ 274
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 142/260 (54%), Gaps = 24/260 (9%)
Query: 11 NVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERD---------- 60
+V+ F+I R I +G+FG + +V++ + + MK + ++K +ER+
Sbjct: 11 DVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQK---CVERNEVRNVFKELQ 67
Query: 61 IMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELA 120
IM + P++VNL+YSFQD ++ +++ + GGD L+ H E + +I EL
Sbjct: 68 IMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVH--FKEETVKLFICELV 125
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAP 180
A+ YL +HRD+KPDN+LL GH+ +TDF A + + +I ++ GT Y+AP
Sbjct: 126 MALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTM--AGTKPYMAP 183
Query: 181 EVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVS 240
E+ +G GY+ + D WS+GV +YELL G P++ + + + +T V+
Sbjct: 184 EMFSSRKGA----GYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETT-VVT 238
Query: 241 FPSSIRLSTAMVNFVQSLVQ 260
+PS+ S MV+ ++ L++
Sbjct: 239 YPSA--WSQEMVSLLKKLLE 256
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 138/242 (57%), Gaps = 26/242 (10%)
Query: 26 GNFGDIYLVEEKQSHNTFVMK-----KVLREK-MPNTI-ERDIMVKSKCPYIVNLFYSFQ 78
G+FG + LV+ ++ N + MK KV++ K + +T+ E+ I+ P++V L +SF+
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 79 DMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKP 138
D +++Y +MEY GG+ + L G SE ARFY ++ +YLH L ++RD+KP
Sbjct: 112 DNSNLYMVMEYAPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKP 169
Query: 139 DNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGS 198
+N+++ G++++TDFG A +V GR + GTPEY+APE++ S GY +
Sbjct: 170 ENLMIDQQGYIQVTDFGFAKRV--KGRTWXL--CGTPEYLAPEIIL-------SKGYNKA 218
Query: 199 CDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRLSTAMVNFVQSL 258
D W++GV+ YE+ G PF + Y I++ V FPS S+ + + +++L
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS----GKVRFPS--HFSSDLKDLLRNL 272
Query: 259 VQ 260
+Q
Sbjct: 273 LQ 274
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 132/242 (54%), Gaps = 22/242 (9%)
Query: 12 VSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKK------VLREKMPNTI-ERDIMVK 64
V+ ++F+ + + +G FG + LV+EK + + MK V ++++ +T+ E ++
Sbjct: 148 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 207
Query: 65 SKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQ 124
S+ P++ L YSFQ + + F+MEY GG+ L + SE +ARFY E+ A+
Sbjct: 208 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER--VFSEDRARFYGAEIVSALD 265
Query: 125 YLHG-LGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVL 183
YLH V+RD+K +N++L GH+K+TDFG + K+G GTPEY+APEVL
Sbjct: 266 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTF-CGTPEYLAPEVL 324
Query: 184 EWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPS 243
E + Y + D W +GVV YE++ G PF + + + IL + + FP
Sbjct: 325 E-------DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM----EEIRFPR 373
Query: 244 SI 245
++
Sbjct: 374 TL 375
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 138/242 (57%), Gaps = 26/242 (10%)
Query: 26 GNFGDIYLVEEKQSHNTFVMK-----KVLREK-MPNTI-ERDIMVKSKCPYIVNLFYSFQ 78
G+FG + LV+ ++ N + MK KV++ K + +T+ E+ I+ P++V L +SF+
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 79 DMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKP 138
D +++Y +MEY GG+ + L G SE ARFY ++ +YLH L ++RD+KP
Sbjct: 112 DNSNLYMVMEYAPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKP 169
Query: 139 DNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGS 198
+N+++ G++++TDFG A +V GR + GTPEY+APE++ S GY +
Sbjct: 170 ENLMIDQQGYIQVTDFGLAKRV--KGRTWXL--CGTPEYLAPEIIL-------SKGYNKA 218
Query: 199 CDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRLSTAMVNFVQSL 258
D W++GV+ YE+ G PF + Y I++ V FPS S+ + + +++L
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS----GKVRFPS--HFSSDLKDLLRNL 272
Query: 259 VQ 260
+Q
Sbjct: 273 LQ 274
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 137/242 (56%), Gaps = 26/242 (10%)
Query: 26 GNFGDIYLVEEKQSHNTFVMK-----KVLREK-MPNTI-ERDIMVKSKCPYIVNLFYSFQ 78
G+FG + LV+ ++ N + MK KV++ K + +T+ E+ I+ P++V L +SF+
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 79 DMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKP 138
D +++Y +MEY GG+ + L G E ARFY ++ +YLH L ++RD+KP
Sbjct: 112 DNSNLYMVMEYAPGGEMFSHLRRI--GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKP 169
Query: 139 DNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGS 198
+N+++ G++K+TDFG A +V GR + GTPEY+APE++ S GY +
Sbjct: 170 ENLMIDQQGYIKVTDFGFAKRV--KGRTWXL--CGTPEYLAPEIIL-------SKGYNKA 218
Query: 199 CDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRLSTAMVNFVQSL 258
D W++GV+ YE+ G PF + Y I++ V FPS S+ + + +++L
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS----GKVRFPS--HFSSDLKDLLRNL 272
Query: 259 VQ 260
+Q
Sbjct: 273 LQ 274
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 135 bits (341), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 132/242 (54%), Gaps = 22/242 (9%)
Query: 12 VSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKK------VLREKMPNTI-ERDIMVK 64
V+ ++F+ + + +G FG + LV+EK + + MK V ++++ +T+ E ++
Sbjct: 145 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 204
Query: 65 SKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQ 124
S+ P++ L YSFQ + + F+MEY GG+ L + SE +ARFY E+ A+
Sbjct: 205 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER--VFSEDRARFYGAEIVSALD 262
Query: 125 YLHG-LGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVL 183
YLH V+RD+K +N++L GH+K+TDFG + K+G GTPEY+APEVL
Sbjct: 263 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTF-CGTPEYLAPEVL 321
Query: 184 EWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPS 243
E + Y + D W +GVV YE++ G PF + + + IL + + FP
Sbjct: 322 E-------DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM----EEIRFPR 370
Query: 244 SI 245
++
Sbjct: 371 TL 372
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 137/242 (56%), Gaps = 26/242 (10%)
Query: 26 GNFGDIYLVEEKQSHNTFVMK-----KVLREK-MPNTI-ERDIMVKSKCPYIVNLFYSFQ 78
G+FG + LV+ ++ N + MK KV++ K + +T+ E+ I+ P++ L +SF+
Sbjct: 53 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFK 112
Query: 79 DMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKP 138
D +++Y +MEY GG+ + L G SE ARFY ++ +YLH L ++RD+KP
Sbjct: 113 DNSNLYMVMEYAPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKP 170
Query: 139 DNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGS 198
+N+++ G++K+TDFG A +V GR + GTPEY+APE++ S GY +
Sbjct: 171 ENLMIDQQGYIKVTDFGFAKRV--KGRTWXL--CGTPEYLAPEIIL-------SKGYNKA 219
Query: 199 CDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRLSTAMVNFVQSL 258
D W++GV+ YE+ G PF + Y I++ V FPS S+ + + +++L
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS----GKVRFPS--HFSSDLKDLLRNL 273
Query: 259 VQ 260
+Q
Sbjct: 274 LQ 275
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 137/242 (56%), Gaps = 26/242 (10%)
Query: 26 GNFGDIYLVEEKQSHNTFVMK-----KVLREK-MPNTI-ERDIMVKSKCPYIVNLFYSFQ 78
G+FG + LV+ ++ N + MK KV++ K + +T+ E+ I+ P++ L +SF+
Sbjct: 53 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFK 112
Query: 79 DMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKP 138
D +++Y +MEY GG+ + L G SE ARFY ++ +YLH L ++RD+KP
Sbjct: 113 DNSNLYMVMEYAPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKP 170
Query: 139 DNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGS 198
+N+++ G++K+TDFG A +V GR + GTPEY+APE++ S GY +
Sbjct: 171 ENLMIDQQGYIKVTDFGFAKRV--KGRTWXL--CGTPEYLAPEIIL-------SKGYNKA 219
Query: 199 CDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRLSTAMVNFVQSL 258
D W++GV+ YE+ G PF + Y I++ V FPS S+ + + +++L
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS----GKVRFPS--HFSSDLKDLLRNL 273
Query: 259 VQ 260
+Q
Sbjct: 274 LQ 275
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 129/243 (53%), Gaps = 22/243 (9%)
Query: 12 VSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPN--------TIERDIMV 63
+ +F+ R + +G+FG + L K++ + + +K + ++ + T +R + +
Sbjct: 20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSL 79
Query: 64 KSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAV 123
P++ LF FQ + ++F+ME+V GGD + Q E++ARFY E+ A+
Sbjct: 80 ARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDL--MFHIQKSRRFDEARARFYAAEIISAL 137
Query: 124 QYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVL 183
+LH G ++RD+K DN+LL GH KL DFG + NG + + GTP+Y+APE+L
Sbjct: 138 MFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNG-VTTATFCGTPDYIAPEIL 196
Query: 184 EWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPS 243
+ M Y + D W++GV+ YE+L G PF E D + +IL D V +P+
Sbjct: 197 QEML-------YGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAIL----NDEVVYPT 245
Query: 244 SIR 246
+
Sbjct: 246 WLH 248
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 135 bits (340), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 134/230 (58%), Gaps = 18/230 (7%)
Query: 9 QKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREK--MPNTIE------RD 60
Q + DF++ + + +G+FG ++L E K+++ F +K + ++ M + +E R
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 61 IMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELA 120
+ + + P++ ++F +FQ +++F+MEY+ GGD + +++ H + S+A FY E+
Sbjct: 72 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSC-HKF-DLSRATFYAAEII 129
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAP 180
+Q+LH G V+RD+K DN+LL GH+K+ DFG + + G K+ GTP+Y+AP
Sbjct: 130 LGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKE-NMLGDAKTNEFCGTPDYIAP 188
Query: 181 EVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSI 230
E+L + NH S D WS GV+ YE+L G +PF+ + + + SI
Sbjct: 189 EILLGQKYNH-------SVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI 231
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 133/230 (57%), Gaps = 18/230 (7%)
Query: 9 QKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREK--MPNTIE------RD 60
Q + DF + + + +G+FG ++L E K+++ F +K + ++ M + +E R
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 61 IMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELA 120
+ + + P++ ++F +FQ +++F+MEY+ GGD + +++ H + S+A FY E+
Sbjct: 71 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSC-HKF-DLSRATFYAAEII 128
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAP 180
+Q+LH G V+RD+K DN+LL GH+K+ DFG + + G K+ GTP+Y+AP
Sbjct: 129 LGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKE-NMLGDAKTNXFCGTPDYIAP 187
Query: 181 EVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSI 230
E+L + NH S D WS GV+ YE+L G +PF+ + + + SI
Sbjct: 188 EILLGQKYNH-------SVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI 230
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 136/242 (56%), Gaps = 26/242 (10%)
Query: 26 GNFGDIYLVEEKQSHNTFVMK-----KVLREK-MPNTI-ERDIMVKSKCPYIVNLFYSFQ 78
G+FG + LV+ ++ N + MK KV++ K + +T+ E+ I+ P++ L +SF+
Sbjct: 53 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFK 112
Query: 79 DMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKP 138
D +++Y +MEY GG+ + L G E ARFY ++ +YLH L ++RD+KP
Sbjct: 113 DNSNLYMVMEYAPGGEMFSHLRRI--GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKP 170
Query: 139 DNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGS 198
+N+++ G++K+TDFG A +V GR + GTPEY+APE++ S GY +
Sbjct: 171 ENLMIDQQGYIKVTDFGFAKRV--KGRTWXL--CGTPEYLAPEIIL-------SKGYNKA 219
Query: 199 CDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRLSTAMVNFVQSL 258
D W++GV+ YE+ G PF + Y I++ V FPS S+ + + +++L
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS----GKVRFPS--HFSSDLKDLLRNL 273
Query: 259 VQ 260
+Q
Sbjct: 274 LQ 275
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 138/287 (48%), Gaps = 26/287 (9%)
Query: 6 ELRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP-----NTIERD 60
E +++ + DF+I R + +G FG++YL EKQS +K + + ++ + + R+
Sbjct: 16 ESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 75
Query: 61 IMVKS--KCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYE 118
+ ++S + P I+ L+ F D VY I+EY G E Q E + YI E
Sbjct: 76 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLG--TVYRELQKLSKFDEQRTATYITE 133
Query: 119 LAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYV 178
LA A+ Y H +HRDIKP+N+LL + G LK+ DFG + + R GT +Y+
Sbjct: 134 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL---CGTLDYL 190
Query: 179 APEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDT 238
PE++E + DLWS+GV+ YE L G PF T TY I +
Sbjct: 191 PPEMIE-------GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI----SRVE 239
Query: 239 VSFPSSIRLSTAMVNFVQSLVQKLDA-RLNMDQVLGHPVFDCLDSDP 284
+FP + + + + L++ + R + +VL HP S P
Sbjct: 240 FTFPDFV--TEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 284
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 132/242 (54%), Gaps = 22/242 (9%)
Query: 12 VSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKK------VLREKMPNTI-ERDIMVK 64
V+ ++F+ + + +G FG + LV+EK + + MK V ++++ +T+ E ++
Sbjct: 6 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 65
Query: 65 SKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQ 124
S+ P++ L YSFQ + + F+MEY GG+ L + SE +ARFY E+ A+
Sbjct: 66 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER--VFSEDRARFYGAEIVSALD 123
Query: 125 YLHG-LGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVL 183
YLH V+RD+K +N++L GH+K+TDFG + K+G GTPEY+APEVL
Sbjct: 124 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXF-CGTPEYLAPEVL 182
Query: 184 EWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPS 243
E + Y + D W +GVV YE++ G PF + + + IL + + FP
Sbjct: 183 E-------DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM----EEIRFPR 231
Query: 244 SI 245
++
Sbjct: 232 TL 233
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 134/255 (52%), Gaps = 24/255 (9%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKM-------PNTIERDIM-VKSK 66
+DF+ + +G+FG + L E K + + +K + ++ + +E+ ++ + K
Sbjct: 341 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGK 400
Query: 67 CPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYL 126
P++ L FQ M+ +YF+MEYV GGD + ++ G E A FY E+A + +L
Sbjct: 401 PPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQV--GRFKEPHAVFYAAEIAIGLFFL 458
Query: 127 HGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWM 186
G ++RD+K DN++L + GH+K+ DFG + +G + + GTP+Y+APE++ +
Sbjct: 459 QSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG-VTTKXFCGTPDYIAPEIIAYQ 517
Query: 187 EGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIR 246
Y S D W+ GV+ YE+L G PF E D + SI+ E V++P S
Sbjct: 518 P-------YGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIM----EHNVAYPKS-- 564
Query: 247 LSTAMVNFVQSLVQK 261
+S V + L+ K
Sbjct: 565 MSKEAVAICKGLMTK 579
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 139/287 (48%), Gaps = 26/287 (9%)
Query: 6 ELRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP-----NTIERD 60
E +++ + DF+I R + +G FG++YL EKQS +K + + ++ + + R+
Sbjct: 4 ESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 63
Query: 61 IMVKS--KCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYE 118
+ ++S + P I+ L+ F D VY I+EY G+ E Q E + YI E
Sbjct: 64 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYK--ELQKLSKFDEQRTATYITE 121
Query: 119 LAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYV 178
LA A+ Y H +HRDIKP+N+LL + G LK+ DFG + + R GT +Y+
Sbjct: 122 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL---CGTLDYL 178
Query: 179 APEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDT 238
PE++E + DLWS+GV+ YE L G PF T TY I +
Sbjct: 179 PPEMIE-------GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI----SRVE 227
Query: 239 VSFPSSIRLSTAMVNFVQSLVQKLDA-RLNMDQVLGHPVFDCLDSDP 284
+FP + + + + L++ + R + +VL HP S P
Sbjct: 228 FTFPDFV--TEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 272
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 141/262 (53%), Gaps = 24/262 (9%)
Query: 12 VSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKM-------PNTIERDIM-V 63
V +DF+ + +G+FG + L + K + + +K + ++ + +E+ ++ +
Sbjct: 16 VKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLAL 75
Query: 64 KSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAV 123
K P++ L FQ ++ +YF+MEYV GGD + ++ G E +A FY E++ +
Sbjct: 76 LDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQV--GKFKEPQAVFYAAEISIGL 133
Query: 124 QYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVL 183
+LH G ++RD+K DN++L + GH+K+ DFG + +G + + GTP+Y+APE++
Sbjct: 134 FFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDG-VTTREFCGTPDYIAPEII 192
Query: 184 EWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPS 243
+ Y S D W+ GV+ YE+L G PF+ E D + SI+ E VS+P
Sbjct: 193 AYQP-------YGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIM----EHNVSYPK 241
Query: 244 SIRLSTAMVNFVQSLVQKLDAR 265
S LS V+ + L+ K A+
Sbjct: 242 S--LSKEAVSICKGLMTKHPAK 261
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 132/242 (54%), Gaps = 22/242 (9%)
Query: 12 VSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKK------VLREKMPNTI-ERDIMVK 64
V+ ++F+ + + +G FG + LV+EK + + MK V ++++ +T+ E ++
Sbjct: 7 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 66
Query: 65 SKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQ 124
S+ P++ L YSFQ + + F+MEY GG+ L + SE +ARFY E+ A+
Sbjct: 67 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER--VFSEDRARFYGAEIVSALD 124
Query: 125 YLHG-LGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVL 183
YLH V+RD+K +N++L GH+K+TDFG + K+G GTPEY+APEVL
Sbjct: 125 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXF-CGTPEYLAPEVL 183
Query: 184 EWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPS 243
E + Y + D W +GVV YE++ G PF + + + IL + + FP
Sbjct: 184 E-------DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM----EEIRFPR 232
Query: 244 SI 245
++
Sbjct: 233 TL 234
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 132/242 (54%), Gaps = 22/242 (9%)
Query: 12 VSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKK------VLREKMPNTI-ERDIMVK 64
V+ ++F+ + + +G FG + LV+EK + + MK V ++++ +T+ E ++
Sbjct: 5 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 64
Query: 65 SKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQ 124
S+ P++ L YSFQ + + F+MEY GG+ L + SE +ARFY E+ A+
Sbjct: 65 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER--VFSEDRARFYGAEIVSALD 122
Query: 125 YLHG-LGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVL 183
YLH V+RD+K +N++L GH+K+TDFG + K+G GTPEY+APEVL
Sbjct: 123 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXF-CGTPEYLAPEVL 181
Query: 184 EWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPS 243
E + Y + D W +GVV YE++ G PF + + + IL + + FP
Sbjct: 182 E-------DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM----EEIRFPR 230
Query: 244 SI 245
++
Sbjct: 231 TL 232
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 78/228 (34%), Positives = 125/228 (54%), Gaps = 24/228 (10%)
Query: 13 SASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTI--------ERDIMVK 64
S DF I R + G+FG ++L+ + + + MK VL++++ + ER ++
Sbjct: 4 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMK-VLKKEIVVRLKQVEHTNDERLMLSI 62
Query: 65 SKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQ 124
P+I+ ++ +FQD ++ IM+Y+ GG+ +LL A+FY E+ A++
Sbjct: 63 VTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQR--FPNPVAKFYAAEVCLALE 120
Query: 125 YLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLE 184
YLH ++RD+KP+N+LL GH+K+TDFG A V + GTP+Y+APEV+
Sbjct: 121 YLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD----VTYXLCGTPDYIAPEVVS 176
Query: 185 WMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDM-TYSSIL 231
+ Y S D WS G++ YE+L G TPF Y++ M TY IL
Sbjct: 177 -------TKPYNKSIDWWSFGILIYEMLAGYTPF-YDSNTMKTYEKIL 216
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 138/287 (48%), Gaps = 26/287 (9%)
Query: 6 ELRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP-----NTIERD 60
E +++ + DF+I R + +G FG++YL EKQS +K + + ++ + + R+
Sbjct: 25 ESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 84
Query: 61 IMVKS--KCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYE 118
+ ++S + P I+ L+ F D VY I+EY G E Q E + YI E
Sbjct: 85 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLG--TVYRELQKLSKFDEQRTATYITE 142
Query: 119 LAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYV 178
LA A+ Y H +HRDIKP+N+LL + G LK+ DFG + + R GT +Y+
Sbjct: 143 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL---CGTLDYL 199
Query: 179 APEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDT 238
PE++E + DLWS+GV+ YE L G PF T TY I +
Sbjct: 200 PPEMIE-------GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI----SRVE 248
Query: 239 VSFPSSIRLSTAMVNFVQSLVQKLDA-RLNMDQVLGHPVFDCLDSDP 284
+FP + + + + L++ + R + +VL HP S P
Sbjct: 249 FTFPDFV--TEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 293
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 139/287 (48%), Gaps = 26/287 (9%)
Query: 6 ELRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP-----NTIERD 60
E +++ + DF+I R + +G FG++YL EKQS +K + + ++ + + R+
Sbjct: 4 ESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 63
Query: 61 IMVKS--KCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYE 118
+ ++S + P I+ L+ F D VY I+EY G+ E Q E + YI E
Sbjct: 64 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYK--ELQKLSKFDEQRTATYITE 121
Query: 119 LAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYV 178
LA A+ Y H +HRDIKP+N+LL + G LK+ DFG + + R GT +Y+
Sbjct: 122 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXL---XGTLDYL 178
Query: 179 APEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDT 238
PE++E + DLWS+GV+ YE L G PF T TY I +
Sbjct: 179 PPEMIE-------GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI----SRVE 227
Query: 239 VSFPSSIRLSTAMVNFVQSLVQKLDA-RLNMDQVLGHPVFDCLDSDP 284
+FP + + + + L++ + R + +VL HP S P
Sbjct: 228 FTFPDFV--TEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 272
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 136/284 (47%), Gaps = 26/284 (9%)
Query: 9 QKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP-----NTIERDIMV 63
++ + DFDI R + +G FG++YL E+QS +K + + ++ + + R++ +
Sbjct: 6 KRQWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEI 65
Query: 64 KS--KCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQ 121
+S + P I+ L+ F D VY I+EY G E Q E + YI ELA
Sbjct: 66 QSHLRHPNILRLYGYFHDATRVYLILEYAPLG--TVYRELQKLSRFDEQRTATYITELAN 123
Query: 122 AVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPE 181
A+ Y H +HRDIKP+N+LL + G LK+ DFG + + R GT +Y+ PE
Sbjct: 124 ALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTL---CGTLDYLPPE 180
Query: 182 VLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSF 241
++E + DLWS+GV+ YE L G PF T TY I + +F
Sbjct: 181 MIE-------GRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRI----SRVEFTF 229
Query: 242 PSSIRLSTAMVNFVQSLVQK-LDARLNMDQVLGHPVFDCLDSDP 284
P + + + + L++ RL + +VL HP S P
Sbjct: 230 PDFV--TEGARDLISRLLKHNASQRLTLAEVLEHPWIKANSSKP 271
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 138/287 (48%), Gaps = 26/287 (9%)
Query: 6 ELRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP-----NTIERD 60
E +++ + DF+I R + +G FG++YL EKQS +K + + ++ + + R+
Sbjct: 25 ESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 84
Query: 61 IMVKS--KCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYE 118
+ ++S + P I+ L+ F D VY I+EY G E Q E + YI E
Sbjct: 85 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLG--TVYRELQKLSKFDEQRTATYITE 142
Query: 119 LAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYV 178
LA A+ Y H +HRDIKP+N+LL + G LK+ DFG + + R GT +Y+
Sbjct: 143 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDL---CGTLDYL 199
Query: 179 APEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDT 238
PE++E + DLWS+GV+ YE L G PF T TY I +
Sbjct: 200 PPEMIE-------GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI----SRVE 248
Query: 239 VSFPSSIRLSTAMVNFVQSLVQKLDA-RLNMDQVLGHPVFDCLDSDP 284
+FP + + + + L++ + R + +VL HP S P
Sbjct: 249 FTFPDFV--TEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 293
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 138/287 (48%), Gaps = 26/287 (9%)
Query: 6 ELRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP-----NTIERD 60
E +++ + DF+I R + +G FG++YL EKQS +K + + ++ + + R+
Sbjct: 2 ESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 61
Query: 61 IMVKS--KCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYE 118
+ ++S + P I+ L+ F D VY I+EY G E Q E + YI E
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLG--TVYRELQKLSKFDEQRTATYITE 119
Query: 119 LAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYV 178
LA A+ Y H +HRDIKP+N+LL + G LK+ DFG + + R GT +Y+
Sbjct: 120 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL---CGTLDYL 176
Query: 179 APEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDT 238
PE++E + DLWS+GV+ YE L G PF T TY I +
Sbjct: 177 PPEMIE-------GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI----SRVE 225
Query: 239 VSFPSSIRLSTAMVNFVQSLVQKLDA-RLNMDQVLGHPVFDCLDSDP 284
+FP + + + + L++ + R + +VL HP S P
Sbjct: 226 FTFPDFV--TEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 270
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 137/287 (47%), Gaps = 26/287 (9%)
Query: 6 ELRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP-----NTIERD 60
E +++ + DF+I R + +G FG++YL EKQS +K + + ++ + + R+
Sbjct: 4 ESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 63
Query: 61 IMVKS--KCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYE 118
+ ++S + P I+ L+ F D VY I+EY G E Q E + YI E
Sbjct: 64 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLG--TVYRELQKLSKFDEQRTATYITE 121
Query: 119 LAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYV 178
LA A+ Y H +HRDIKP+N+LL + G LK+ DFG + + R GT +Y+
Sbjct: 122 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL---CGTLDYL 178
Query: 179 APEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDT 238
PE +E + DLWS+GV+ YE L G PF T TY I +
Sbjct: 179 PPEXIE-------GRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI----SRVE 227
Query: 239 VSFPSSIRLSTAMVNFVQSLVQKLDA-RLNMDQVLGHPVFDCLDSDP 284
+FP + + + + L++ + R + +VL HP S P
Sbjct: 228 FTFPDFV--TEGARDLISRLLKHNPSQRPXLREVLEHPWITANSSKP 272
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 138/287 (48%), Gaps = 26/287 (9%)
Query: 6 ELRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP-----NTIERD 60
E +++ + DF+I R + +G FG++YL EKQS +K + + ++ + + R+
Sbjct: 4 ESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 63
Query: 61 IMVKS--KCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYE 118
+ ++S + P I+ L+ F D VY I+EY G E Q E + YI E
Sbjct: 64 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLG--TVYRELQKLSKFDEQRTATYITE 121
Query: 119 LAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYV 178
LA A+ Y H +HRDIKP+N+LL + G LK+ DFG + + R GT +Y+
Sbjct: 122 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL---CGTLDYL 178
Query: 179 APEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDT 238
PE++E + DLWS+GV+ YE L G PF T TY I +
Sbjct: 179 PPEMIE-------GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI----SRVE 227
Query: 239 VSFPSSIRLSTAMVNFVQSLVQKLDA-RLNMDQVLGHPVFDCLDSDP 284
+FP + + + + L++ + R + +VL HP S P
Sbjct: 228 FTFPDFV--TEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 272
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 136/284 (47%), Gaps = 26/284 (9%)
Query: 9 QKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP-----NTIERDIMV 63
++ + DFDI R + +G FG++YL E+QS +K + + ++ + + R++ +
Sbjct: 6 KRQWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEI 65
Query: 64 KS--KCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQ 121
+S + P I+ L+ F D VY I+EY G E Q E + YI ELA
Sbjct: 66 QSHLRHPNILRLYGYFHDATRVYLILEYAPLG--TVYRELQKLSRFDEQRTATYITELAN 123
Query: 122 AVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPE 181
A+ Y H +HRDIKP+N+LL + G LK+ DFG + + R GT +Y+ PE
Sbjct: 124 ALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTL---CGTLDYLPPE 180
Query: 182 VLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSF 241
++E + DLWS+GV+ YE L G PF T TY I + +F
Sbjct: 181 MIE-------GRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRI----SRVEFTF 229
Query: 242 PSSIRLSTAMVNFVQSLVQK-LDARLNMDQVLGHPVFDCLDSDP 284
P + + + + L++ RL + +VL HP S P
Sbjct: 230 PDFV--TEGARDLISRLLKHNASQRLTLAEVLEHPWIKANSSKP 271
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 138/287 (48%), Gaps = 26/287 (9%)
Query: 6 ELRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP-----NTIERD 60
E +++ + DF+I R + +G FG++YL EKQS +K + + ++ + + R+
Sbjct: 1 ESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 60
Query: 61 IMVKS--KCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYE 118
+ ++S + P I+ L+ F D VY I+EY G E Q E + YI E
Sbjct: 61 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLG--TVYRELQKLSKFDEQRTATYITE 118
Query: 119 LAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYV 178
LA A+ Y H +HRDIKP+N+LL + G LK+ DFG + + R GT +Y+
Sbjct: 119 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXL---CGTLDYL 175
Query: 179 APEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDT 238
PE++E + DLWS+GV+ YE L G PF T TY I +
Sbjct: 176 PPEMIE-------GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI----SRVE 224
Query: 239 VSFPSSIRLSTAMVNFVQSLVQKLDA-RLNMDQVLGHPVFDCLDSDP 284
+FP + + + + L++ + R + +VL HP S P
Sbjct: 225 FTFPDFV--TEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 269
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 142/283 (50%), Gaps = 30/283 (10%)
Query: 3 VVKELRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK-KVL------REKMPN 55
+ E+ ++ + DFDI R + +G FG++YL EKQ N F+M KVL +E + +
Sbjct: 2 ALAEMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQ--NKFIMALKVLFKSQLEKEGVEH 59
Query: 56 TIERDIMVKS--KCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKAR 113
+ R+I ++S + P I+ ++ F D +Y ++E+ G+ E Q HG E ++
Sbjct: 60 QLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYK--ELQKHGRFDEQRSA 117
Query: 114 FYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVG 173
++ ELA A+ Y H +HRDIKP+N+L+ G LK+ DFG + ++ G
Sbjct: 118 TFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS---LRRRXMCG 174
Query: 174 TPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILAC 233
T +Y+ PE++E + DLW GV+ YE L G PF+ + T+ I+
Sbjct: 175 TLDYLPPEMIE-------GKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV 227
Query: 234 DTEDTVSFPSSIRLSTAMVNFVQSLVQ-KLDARLNMDQVLGHP 275
D + FP LS + + L++ RL + V+ HP
Sbjct: 228 D----LKFPPF--LSDGSKDLISKLLRYHPPQRLPLKGVMEHP 264
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 142/283 (50%), Gaps = 30/283 (10%)
Query: 3 VVKELRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK-KVL------REKMPN 55
+ E+ ++ + DFDI R + +G FG++YL EKQ N F+M KVL +E + +
Sbjct: 3 ALAEMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQ--NKFIMALKVLFKSQLEKEGVEH 60
Query: 56 TIERDIMVKS--KCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKAR 113
+ R+I ++S + P I+ ++ F D +Y ++E+ G+ E Q HG E ++
Sbjct: 61 QLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYK--ELQKHGRFDEQRSA 118
Query: 114 FYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVG 173
++ ELA A+ Y H +HRDIKP+N+L+ G LK+ DFG + ++ G
Sbjct: 119 TFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS---LRRRXMCG 175
Query: 174 TPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILAC 233
T +Y+ PE++E + DLW GV+ YE L G PF+ + T+ I+
Sbjct: 176 TLDYLPPEMIE-------GKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV 228
Query: 234 DTEDTVSFPSSIRLSTAMVNFVQSLVQ-KLDARLNMDQVLGHP 275
D + FP LS + + L++ RL + V+ HP
Sbjct: 229 D----LKFPPF--LSDGSKDLISKLLRYHPPQRLPLKGVMEHP 265
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 134/255 (52%), Gaps = 24/255 (9%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKM-------PNTIERDIM-VKSK 66
+DF+ + +G+FG + L E K + + +K + ++ + +E+ ++ + K
Sbjct: 20 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGK 79
Query: 67 CPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYL 126
P++ L FQ M+ +YF+MEYV GGD + + Q G E A FY E+A + +L
Sbjct: 80 PPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHI--QQVGRFKEPHAVFYAAEIAIGLFFL 137
Query: 127 HGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWM 186
G ++RD+K DN++L + GH+K+ DFG + +G + + GTP+Y+APE++ +
Sbjct: 138 QSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG-VTTKXFCGTPDYIAPEIIAYQ 196
Query: 187 EGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIR 246
Y S D W+ GV+ YE+L G PF E D + SI+ E V++P S
Sbjct: 197 P-------YGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIM----EHNVAYPKS-- 243
Query: 247 LSTAMVNFVQSLVQK 261
+S V + L+ K
Sbjct: 244 MSKEAVAICKGLMTK 258
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 142/283 (50%), Gaps = 30/283 (10%)
Query: 3 VVKELRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK-KVL------REKMPN 55
+ E+ ++ + DFDI R + +G FG++YL EKQ N F+M KVL +E + +
Sbjct: 2 ALAEMPKRKFTIDDFDIVRPLGKGKFGNVYLAREKQ--NKFIMALKVLFKSQLEKEGVEH 59
Query: 56 TIERDIMVKS--KCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKAR 113
+ R+I ++S + P I+ ++ F D +Y ++E+ G+ E Q HG E ++
Sbjct: 60 QLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYK--ELQKHGRFDEQRSA 117
Query: 114 FYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVG 173
++ ELA A+ Y H +HRDIKP+N+L+ G LK+ DFG + ++ G
Sbjct: 118 TFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS---LRRRXMCG 174
Query: 174 TPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILAC 233
T +Y+ PE++E + DLW GV+ YE L G PF+ + T+ I+
Sbjct: 175 TLDYLPPEMIE-------GKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV 227
Query: 234 DTEDTVSFPSSIRLSTAMVNFVQSLVQ-KLDARLNMDQVLGHP 275
D + FP LS + + L++ RL + V+ HP
Sbjct: 228 D----LKFPPF--LSDGSKDLISKLLRYHPPQRLPLKGVMEHP 264
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 137/285 (48%), Gaps = 26/285 (9%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP-----NTIERDIM 62
+++ + DF+I R + +G FG++YL EKQS +K + + ++ + + R++
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 63 VKS--KCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELA 120
++S + P I+ L+ F D VY I+EY G E Q E + YI ELA
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLG--TVYRELQKLSKFDEQRTATYITELA 119
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAP 180
A+ Y H +HRDIKP+N+LL + G LK+ DFG + + R GT +Y+ P
Sbjct: 120 NALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDL---CGTLDYLPP 176
Query: 181 EVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVS 240
E++E + DLWS+GV+ YE L G PF T TY I + +
Sbjct: 177 EMIE-------GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI----SRVEFT 225
Query: 241 FPSSIRLSTAMVNFVQSLVQKLDA-RLNMDQVLGHPVFDCLDSDP 284
FP + + + + L++ + R + +VL HP S P
Sbjct: 226 FPDFV--TEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 268
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 137/285 (48%), Gaps = 26/285 (9%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP-----NTIERDIM 62
+++ + DF+I R + +G FG++YL EKQS +K + + ++ + + R++
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 63 VKS--KCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELA 120
++S + P I+ L+ F D VY I+EY G E Q E + YI ELA
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLG--TVYRELQKLSKFDEQRTATYITELA 119
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAP 180
A+ Y H +HRDIKP+N+LL + G LK+ DFG + + R GT +Y+ P
Sbjct: 120 NALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTL---SGTLDYLPP 176
Query: 181 EVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVS 240
E++E + DLWS+GV+ YE L G PF T TY I + +
Sbjct: 177 EMIE-------GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI----SRVEFT 225
Query: 241 FPSSIRLSTAMVNFVQSLVQKLDA-RLNMDQVLGHPVFDCLDSDP 284
FP + + + + L++ + R + +VL HP S P
Sbjct: 226 FPDFV--TEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 268
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 137/285 (48%), Gaps = 26/285 (9%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP-----NTIERDIM 62
+++ + DF+I R + +G FG++YL EKQS +K + + ++ + + R++
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 63 VKS--KCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELA 120
++S + P I+ L+ F D VY I+EY G E Q E + YI ELA
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLG--TVYRELQKLSKFDEQRTATYITELA 123
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAP 180
A+ Y H +HRDIKP+N+LL + G LK+ DFG + + R GT +Y+ P
Sbjct: 124 NALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDL---CGTLDYLPP 180
Query: 181 EVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVS 240
E++E + DLWS+GV+ YE L G PF T TY I + +
Sbjct: 181 EMIE-------GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI----SRVEFT 229
Query: 241 FPSSIRLSTAMVNFVQSLVQKLDA-RLNMDQVLGHPVFDCLDSDP 284
FP + + + + L++ + R + +VL HP S P
Sbjct: 230 FPDFV--TEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 272
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 134/277 (48%), Gaps = 26/277 (9%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP-----NTIERDIMVKS--KCP 68
DF+I R + +G FG++YL EKQS +K + + ++ + + R++ ++S + P
Sbjct: 9 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 68
Query: 69 YIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHG 128
I+ L+ F D VY I+EY G E Q E + YI ELA A+ Y H
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLG--TVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 129 LGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEG 188
+HRDIKP+N+LL + G LK+ DFG + + R + GT +Y+ PE++E
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTEL---CGTLDYLPPEMIE---- 179
Query: 189 NHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRLS 248
+ DLWS+GV+ YE L G PF T TY I + +FP + +
Sbjct: 180 ---GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI----SRVEFTFPDFV--T 230
Query: 249 TAMVNFVQSLVQKLDA-RLNMDQVLGHPVFDCLDSDP 284
+ + L++ + R + +VL HP S P
Sbjct: 231 EGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 267
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 137/285 (48%), Gaps = 26/285 (9%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP-----NTIERDIM 62
+++ + DF+I R + +G FG++YL EKQS +K + + ++ + + R++
Sbjct: 1 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 63 VKS--KCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELA 120
++S + P I+ L+ F D VY I+EY G E Q E + YI ELA
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLG--TVYRELQKLSKFDEQRTATYITELA 118
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAP 180
A+ Y H +HRDIKP+N+LL + G LK+ DFG + + R GT +Y+ P
Sbjct: 119 NALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDL---CGTLDYLPP 175
Query: 181 EVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVS 240
E++E + DLWS+GV+ YE L G PF T TY I + +
Sbjct: 176 EMIE-------GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI----SRVEFT 224
Query: 241 FPSSIRLSTAMVNFVQSLVQKLDA-RLNMDQVLGHPVFDCLDSDP 284
FP + + + + L++ + R + +VL HP S P
Sbjct: 225 FPDFV--TEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 267
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 138/287 (48%), Gaps = 26/287 (9%)
Query: 6 ELRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP-----NTIERD 60
E +++ + DF+I R + +G FG++YL EKQS +K + + ++ + + R+
Sbjct: 1 ESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 60
Query: 61 IMVKS--KCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYE 118
+ ++S + P I+ L+ F D VY I+EY G E Q E + YI E
Sbjct: 61 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLG--TVYRELQKLSKFDEQRTATYITE 118
Query: 119 LAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYV 178
LA A+ Y H +HRDIKP+N+LL + G LK+ +FG + + R GT +Y+
Sbjct: 119 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTL---CGTLDYL 175
Query: 179 APEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDT 238
PE++E + DLWS+GV+ YE L G PF T TY I +
Sbjct: 176 PPEMIE-------GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI----SRVE 224
Query: 239 VSFPSSIRLSTAMVNFVQSLVQKLDA-RLNMDQVLGHPVFDCLDSDP 284
+FP + + + + L++ + R + +VL HP S P
Sbjct: 225 FTFPDFV--TEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 269
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 133/277 (48%), Gaps = 26/277 (9%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP-----NTIERDIMVKS--KCP 68
DF+I R + +G FG++YL EKQS +K + + ++ + + R++ ++S + P
Sbjct: 9 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 68
Query: 69 YIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHG 128
I+ L+ F D VY I+EY G E Q E + YI ELA A+ Y H
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLG--TVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 129 LGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEG 188
+HRDIKP+N+LL + G LK+ DFG + + R GT +Y+ PE++E
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDL---CGTLDYLPPEMIE---- 179
Query: 189 NHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRLS 248
+ DLWS+GV+ YE L G PF T TY I + +FP + +
Sbjct: 180 ---GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI----SRVEFTFPDFV--T 230
Query: 249 TAMVNFVQSLVQKLDA-RLNMDQVLGHPVFDCLDSDP 284
+ + L++ + R + +VL HP S P
Sbjct: 231 EGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 267
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 133/277 (48%), Gaps = 26/277 (9%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP-----NTIERDIMVKS--KCP 68
DF+I R + +G FG++YL EKQS +K + + ++ + + R++ ++S + P
Sbjct: 9 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 68
Query: 69 YIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHG 128
I+ L+ F D VY I+EY G E Q E + YI ELA A+ Y H
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLG--TVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 129 LGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEG 188
+HRDIKP+N+LL + G LK+ DFG + + R GT +Y+ PE++E
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL---CGTLDYLPPEMIE---- 179
Query: 189 NHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRLS 248
+ DLWS+GV+ YE L G PF T TY I + +FP + +
Sbjct: 180 ---GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI----SRVEFTFPDFV--T 230
Query: 249 TAMVNFVQSLVQKLDA-RLNMDQVLGHPVFDCLDSDP 284
+ + L++ + R + +VL HP S P
Sbjct: 231 EGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 267
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 133/277 (48%), Gaps = 26/277 (9%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP-----NTIERDIMVKS--KCP 68
DF+I R + +G FG++YL EKQS +K + + ++ + + R++ ++S + P
Sbjct: 12 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 71
Query: 69 YIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHG 128
I+ L+ F D VY I+EY G E Q E + YI ELA A+ Y H
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLG--TVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 129 LGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEG 188
+HRDIKP+N+LL + G LK+ DFG + + R GT +Y+ PE++E
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAAL---CGTLDYLPPEMIE---- 182
Query: 189 NHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRLS 248
+ DLWS+GV+ YE L G PF T TY I + +FP + +
Sbjct: 183 ---GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI----SRVEFTFPDFV--T 233
Query: 249 TAMVNFVQSLVQKLDA-RLNMDQVLGHPVFDCLDSDP 284
+ + L++ + R + +VL HP S P
Sbjct: 234 EGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 270
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 137/285 (48%), Gaps = 26/285 (9%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP-----NTIERDIM 62
+++ + DF+I R + +G FG++YL EKQS +K + + ++ + + R++
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 63 VKS--KCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELA 120
++S + P I+ L+ F D VY I+EY G E Q E + YI ELA
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLG--TVYRELQKLSKFDEQRTATYITELA 119
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAP 180
A+ Y H +HRDIKP+N+LL + G LK+ DFG + + R GT +Y+ P
Sbjct: 120 NALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTL---CGTLDYLPP 176
Query: 181 EVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVS 240
E++E + DLWS+GV+ YE L G PF T TY I + +
Sbjct: 177 EMIE-------GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI----SRVEFT 225
Query: 241 FPSSIRLSTAMVNFVQSLVQKLDA-RLNMDQVLGHPVFDCLDSDP 284
FP + + + + L++ + R + +VL HP S P
Sbjct: 226 FPDFV--TEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 268
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 136/284 (47%), Gaps = 26/284 (9%)
Query: 9 QKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP-----NTIERDIMV 63
++ + DF+I R + +G FG++YL EKQS +K + + ++ + + R++ +
Sbjct: 2 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 64 KS--KCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQ 121
+S + P I+ L+ F D VY I+EY G E Q E + YI ELA
Sbjct: 62 QSHLRHPNILRLYGYFHDATRVYLILEYAPLG--TVYRELQKLSKFDEQRTATYITELAN 119
Query: 122 AVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPE 181
A+ Y H +HRDIKP+N+LL + G LK+ DFG + + R GT +Y+ PE
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAAL---CGTLDYLPPE 176
Query: 182 VLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSF 241
++E + DLWS+GV+ YE L G PF T TY I + +F
Sbjct: 177 MIE-------GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI----SRVEFTF 225
Query: 242 PSSIRLSTAMVNFVQSLVQKLDA-RLNMDQVLGHPVFDCLDSDP 284
P + + + + L++ + R + +VL HP S P
Sbjct: 226 PDFV--TEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 267
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 117/232 (50%), Gaps = 19/232 (8%)
Query: 6 ELRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP-----NTIERD 60
E +++ + DF+I R + +G FG++YL EKQS +K + + ++ + + R+
Sbjct: 2 ESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 61
Query: 61 IMVKS--KCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYE 118
+ ++S + P I+ L+ F D VY I+EY G E Q E + YI E
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLG--TVYRELQKLSKFDEQRTATYITE 119
Query: 119 LAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYV 178
LA A+ Y H +HRDIKP+N+LL + G LK+ DFG + + R GT +Y+
Sbjct: 120 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL---CGTLDYL 176
Query: 179 APEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSI 230
PE++E + DLWS+GV+ YE L G PF T TY I
Sbjct: 177 PPEMIE-------GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 221
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 136/284 (47%), Gaps = 26/284 (9%)
Query: 9 QKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP-----NTIERDIMV 63
++ + DF+I R + +G FG++YL EKQS +K + + ++ + + R++ +
Sbjct: 1 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 60
Query: 64 KS--KCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQ 121
+S + P I+ L+ F D VY I+EY G E Q E + YI ELA
Sbjct: 61 QSHLRHPNILRLYGYFHDATRVYLILEYAPLG--TVYRELQKLSKFDEQRTATYITELAN 118
Query: 122 AVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPE 181
A+ Y H +HRDIKP+N+LL + G LK+ DFG + + R GT +Y+ PE
Sbjct: 119 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL---CGTLDYLPPE 175
Query: 182 VLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSF 241
++E + DLWS+GV+ YE L G PF T TY I + +F
Sbjct: 176 MIE-------GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI----SRVEFTF 224
Query: 242 PSSIRLSTAMVNFVQSLVQKLDA-RLNMDQVLGHPVFDCLDSDP 284
P + + + + L++ + R + +VL HP S P
Sbjct: 225 PDFV--TEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 266
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 117/232 (50%), Gaps = 19/232 (8%)
Query: 6 ELRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP-----NTIERD 60
E +++ + DF+I R + +G FG++YL EKQS +K + + ++ + + R+
Sbjct: 2 ESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 61
Query: 61 IMVKS--KCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYE 118
+ ++S + P I+ L+ F D VY I+EY G E Q E + YI E
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLG--TVYRELQKLSKFDEQRTATYITE 119
Query: 119 LAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYV 178
LA A+ Y H +HRDIKP+N+LL + G LK+ DFG + + R GT +Y+
Sbjct: 120 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXL---CGTLDYL 176
Query: 179 APEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSI 230
PE++E + DLWS+GV+ YE L G PF T TY I
Sbjct: 177 PPEMIE-------GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 221
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 136/284 (47%), Gaps = 26/284 (9%)
Query: 9 QKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP-----NTIERDIMV 63
++ + DF+I R + +G FG++YL EKQS +K + + ++ + + R++ +
Sbjct: 2 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 64 KS--KCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQ 121
+S + P I+ L+ F D VY I+EY G E Q E + YI ELA
Sbjct: 62 QSHLRHPNILRLYGYFHDATRVYLILEYAPLG--TVYRELQKLSKFDEQRTATYITELAN 119
Query: 122 AVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPE 181
A+ Y H +HRDIKP+N+LL + G LK+ DFG + + R GT +Y+ PE
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXL---CGTLDYLPPE 176
Query: 182 VLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSF 241
++E + DLWS+GV+ YE L G PF T TY I + +F
Sbjct: 177 MIE-------GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI----SRVEFTF 225
Query: 242 PSSIRLSTAMVNFVQSLVQKLDA-RLNMDQVLGHPVFDCLDSDP 284
P + + + + L++ + R + +VL HP S P
Sbjct: 226 PDFV--TEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 267
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 136/284 (47%), Gaps = 26/284 (9%)
Query: 9 QKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP-----NTIERDIMV 63
++ + DF+I R + +G FG++YL EKQS +K + + ++ + + R++ +
Sbjct: 2 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 64 KS--KCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQ 121
+S + P I+ L+ F D VY I+EY G E Q E + YI ELA
Sbjct: 62 QSHLRHPNILRLYGYFHDATRVYLILEYAPLG--TVYRELQKLSKFDEQRTATYITELAN 119
Query: 122 AVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPE 181
A+ Y H +HRDIKP+N+LL + G LK+ DFG + + R GT +Y+ PE
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXL---CGTLDYLPPE 176
Query: 182 VLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSF 241
++E + DLWS+GV+ YE L G PF T TY I + +F
Sbjct: 177 MIE-------GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI----SRVEFTF 225
Query: 242 PSSIRLSTAMVNFVQSLVQKLDA-RLNMDQVLGHPVFDCLDSDP 284
P + + + + L++ + R + +VL HP S P
Sbjct: 226 PDFV--TEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 267
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 143/281 (50%), Gaps = 36/281 (12%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK-----KVLRE-KMPN-TIERDIMVKSKCP 68
DF + + +G+F + L E + + +K +++E K+P T ERD+M + P
Sbjct: 34 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 93
Query: 69 YIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHG 128
+ V L+++FQD +YF + Y G+ + + G E+ RFY E+ A++YLHG
Sbjct: 94 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHG 151
Query: 129 LGYVHRDIKPDNMLLSATGHLKLTDFGSATQV---DKNGRIKSIVPVGTPEYVAPEVLEW 185
G +HRD+KP+N+LL+ H+++TDFG+A + K R S VGT +YV+PE+L
Sbjct: 152 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSF--VGTAQYVSPELLT- 208
Query: 186 MEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSI 245
S DLW++G + Y+L+ G PF + + I+ + + F
Sbjct: 209 ------EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKA 262
Query: 246 RLSTAMVNFVQSLVQKLDA--RLNMDQVLG------HPVFD 278
R + V+ L+ LDA RL +++ G HP F+
Sbjct: 263 R------DLVEKLLV-LDATKRLGCEEMEGYGPLKAHPFFE 296
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 143/281 (50%), Gaps = 36/281 (12%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK-----KVLRE-KMPN-TIERDIMVKSKCP 68
DF + + +G+F + L E + + +K +++E K+P T ERD+M + P
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 69 YIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHG 128
+ V L+++FQD +YF + Y G+ + + G E+ RFY E+ A++YLHG
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHG 150
Query: 129 LGYVHRDIKPDNMLLSATGHLKLTDFGSATQV---DKNGRIKSIVPVGTPEYVAPEVLEW 185
G +HRD+KP+N+LL+ H+++TDFG+A + K R VGT +YV+PE+L
Sbjct: 151 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF--VGTAQYVSPELLT- 207
Query: 186 MEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSI 245
S DLW++G + Y+L+ G PF + ++ I+ + + F
Sbjct: 208 ------EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKA 261
Query: 246 RLSTAMVNFVQSLVQKLDA--RLNMDQVLG------HPVFD 278
R + V+ L+ LDA RL +++ G HP F+
Sbjct: 262 R------DLVEKLLV-LDATKRLGCEEMEGYGPLKAHPFFE 295
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 143/281 (50%), Gaps = 36/281 (12%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK-----KVLRE-KMPN-TIERDIMVKSKCP 68
DF + + +G+F + L E + + +K +++E K+P T ERD+M + P
Sbjct: 36 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 95
Query: 69 YIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHG 128
+ V L+++FQD +YF + Y G+ + + G E+ RFY E+ A++YLHG
Sbjct: 96 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHG 153
Query: 129 LGYVHRDIKPDNMLLSATGHLKLTDFGSATQV---DKNGRIKSIVPVGTPEYVAPEVLEW 185
G +HRD+KP+N+LL+ H+++TDFG+A + K R VGT +YV+PE+L
Sbjct: 154 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF--VGTAQYVSPELLT- 210
Query: 186 MEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSI 245
S DLW++G + Y+L+ G PF + + I+ + + +F
Sbjct: 211 ------EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPAAFFPKA 264
Query: 246 RLSTAMVNFVQSLVQKLDA--RLNMDQVLG------HPVFD 278
R + V+ L+ LDA RL +++ G HP F+
Sbjct: 265 R------DLVEKLLV-LDATKRLGCEEMEGYGPLKAHPFFE 298
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 136/284 (47%), Gaps = 26/284 (9%)
Query: 9 QKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP-----NTIERDIMV 63
++ + DF+I R + +G FG++YL EKQS +K + + ++ + + R++ +
Sbjct: 6 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 65
Query: 64 KS--KCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQ 121
+S + P I+ L+ F D VY I+EY G E Q E + YI ELA
Sbjct: 66 QSHLRHPNILRLYGYFHDATRVYLILEYAPLG--TVYRELQKLSKFDEQRTATYITELAN 123
Query: 122 AVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPE 181
A+ Y H +HRDIKP+N+LL + G LK+ DFG + + R GT +Y+ PE
Sbjct: 124 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL---CGTLDYLPPE 180
Query: 182 VLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSF 241
++E + DLWS+GV+ YE L G PF T TY I + +F
Sbjct: 181 MIE-------GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI----SRVEFTF 229
Query: 242 PSSIRLSTAMVNFVQSLVQKLDA-RLNMDQVLGHPVFDCLDSDP 284
P + + + + L++ + R + +VL HP S P
Sbjct: 230 PDFV--TEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 271
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 144/283 (50%), Gaps = 36/283 (12%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK-----KVLRE-KMPN-TIERDIMVKSKCP 68
DF + + +G+F + L E + + +K +++E K+P T ERD+M + P
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 69 YIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHG 128
+ V L+++FQD +YF + Y G+ + + G E+ RFY E+ A++YLHG
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHG 150
Query: 129 LGYVHRDIKPDNMLLSATGHLKLTDFGSATQV---DKNGRIKSIVPVGTPEYVAPEVLEW 185
G +HRD+KP+N+LL+ H+++TDFG+A + K R VGT +YV+PE+L
Sbjct: 151 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF--VGTAQYVSPELLT- 207
Query: 186 MEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSI 245
S DLW++G + Y+L+ G PF + ++ I+ + + F
Sbjct: 208 ------EKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKA 261
Query: 246 RLSTAMVNFVQSLVQKLDA--RLNMDQVLG------HPVFDCL 280
R + V+ L+ LDA RL +++ G HP F+ +
Sbjct: 262 R------DLVEKLLV-LDATKRLGCEEMEGYGPLKAHPFFESV 297
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 138/287 (48%), Gaps = 26/287 (9%)
Query: 6 ELRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP-----NTIERD 60
E +++ + DF+I R + +G FG++YL EKQS +K + + ++ + + R+
Sbjct: 2 ESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 61
Query: 61 IMVKS--KCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYE 118
+ ++S + P I+ L+ F D VY I+EY G E Q E + YI E
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLG--TVYRELQKLSKFDEQRTATYITE 119
Query: 119 LAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYV 178
LA A+ Y H +HRDIKP+N+LL + G LK+ +FG + + R GT +Y+
Sbjct: 120 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTL---CGTLDYL 176
Query: 179 APEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDT 238
PE++E + DLWS+GV+ YE L G PF T TY I +
Sbjct: 177 PPEMIE-------GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI----SRVE 225
Query: 239 VSFPSSIRLSTAMVNFVQSLVQKLDA-RLNMDQVLGHPVFDCLDSDP 284
+FP + + + + L++ + R + +VL HP S P
Sbjct: 226 FTFPDFV--TEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 270
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 143/281 (50%), Gaps = 36/281 (12%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK-----KVLRE-KMPN-TIERDIMVKSKCP 68
DF + + +G+F + L E + + +K +++E K+P T ERD+M + P
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 69 YIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHG 128
+ V L+++FQD +YF + Y G+ + + G E+ RFY E+ A++YLHG
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHG 148
Query: 129 LGYVHRDIKPDNMLLSATGHLKLTDFGSATQV---DKNGRIKSIVPVGTPEYVAPEVLEW 185
G +HRD+KP+N+LL+ H+++TDFG+A + K R + VGT +YV+PE+L
Sbjct: 149 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAF--VGTAQYVSPELLT- 205
Query: 186 MEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSI 245
S DLW++G + Y+L+ G PF + + I+ + + F
Sbjct: 206 ------EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKA 259
Query: 246 RLSTAMVNFVQSLVQKLDA--RLNMDQVLG------HPVFD 278
R + V+ L+ LDA RL +++ G HP F+
Sbjct: 260 R------DLVEKLLV-LDATKRLGCEEMEGYGPLKAHPFFE 293
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 143/281 (50%), Gaps = 36/281 (12%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK-----KVLRE-KMPN-TIERDIMVKSKCP 68
DF + + +G+F + L E + + +K +++E K+P T ERD+M + P
Sbjct: 30 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 89
Query: 69 YIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHG 128
+ V L+++FQD +YF + Y G+ + + G E+ RFY E+ A++YLHG
Sbjct: 90 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHG 147
Query: 129 LGYVHRDIKPDNMLLSATGHLKLTDFGSATQV---DKNGRIKSIVPVGTPEYVAPEVLEW 185
G +HRD+KP+N+LL+ H+++TDFG+A + K R S VGT +YV+PE+L
Sbjct: 148 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSF--VGTAQYVSPELLT- 204
Query: 186 MEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSI 245
S DLW++G + Y+L+ G PF + + I+ + + F
Sbjct: 205 ------EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKA 258
Query: 246 RLSTAMVNFVQSLVQKLDA--RLNMDQVLG------HPVFD 278
R + V+ L+ LDA RL +++ G HP F+
Sbjct: 259 R------DLVEKLLV-LDATKRLGCEEMEGYGPLKAHPFFE 292
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 142/281 (50%), Gaps = 36/281 (12%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK-----KVLRE-KMPN-TIERDIMVKSKCP 68
DF + + +G+F + L E + + +K +++E K+P T ERD+M + P
Sbjct: 8 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 67
Query: 69 YIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHG 128
+ V L+++FQD +YF + Y G+ + + G E+ RFY E+ A++YLHG
Sbjct: 68 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHG 125
Query: 129 LGYVHRDIKPDNMLLSATGHLKLTDFGSATQV---DKNGRIKSIVPVGTPEYVAPEVLEW 185
G +HRD+KP+N+LL+ H+++TDFG+A + K R VGT +YV+PE+L
Sbjct: 126 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF--VGTAQYVSPELLT- 182
Query: 186 MEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSI 245
S DLW++G + Y+L+ G PF + + I+ + + F
Sbjct: 183 ------EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKA 236
Query: 246 RLSTAMVNFVQSLVQKLDA--RLNMDQVLG------HPVFD 278
R + V+ L+ LDA RL +++ G HP F+
Sbjct: 237 R------DLVEKLLV-LDATKRLGCEEMEGYGPLKAHPFFE 270
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 142/281 (50%), Gaps = 36/281 (12%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK-----KVLRE-KMPN-TIERDIMVKSKCP 68
DF + + +G+F + L E + + +K +++E K+P T ERD+M + P
Sbjct: 10 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 69
Query: 69 YIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHG 128
+ V L+++FQD +YF + Y G+ + + G E+ RFY E+ A++YLHG
Sbjct: 70 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHG 127
Query: 129 LGYVHRDIKPDNMLLSATGHLKLTDFGSATQV---DKNGRIKSIVPVGTPEYVAPEVLEW 185
G +HRD+KP+N+LL+ H+++TDFG+A + K R VGT +YV+PE+L
Sbjct: 128 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF--VGTAQYVSPELLT- 184
Query: 186 MEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSI 245
S DLW++G + Y+L+ G PF + + I+ + + F
Sbjct: 185 ------EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKA 238
Query: 246 RLSTAMVNFVQSLVQKLDA--RLNMDQVLG------HPVFD 278
R + V+ L+ LDA RL +++ G HP F+
Sbjct: 239 R------DLVEKLLV-LDATKRLGCEEMEGYGPLKAHPFFE 272
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 142/281 (50%), Gaps = 36/281 (12%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK-----KVLRE-KMPN-TIERDIMVKSKCP 68
DF + + +G+F + L E + + +K +++E K+P T ERD+M + P
Sbjct: 9 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 68
Query: 69 YIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHG 128
+ V L+++FQD +YF + Y G+ + + G E+ RFY E+ A++YLHG
Sbjct: 69 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHG 126
Query: 129 LGYVHRDIKPDNMLLSATGHLKLTDFGSATQV---DKNGRIKSIVPVGTPEYVAPEVLEW 185
G +HRD+KP+N+LL+ H+++TDFG+A + K R VGT +YV+PE+L
Sbjct: 127 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF--VGTAQYVSPELLT- 183
Query: 186 MEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSI 245
S DLW++G + Y+L+ G PF + + I+ + + F
Sbjct: 184 ------EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKA 237
Query: 246 RLSTAMVNFVQSLVQKLDA--RLNMDQVLG------HPVFD 278
R + V+ L+ LDA RL +++ G HP F+
Sbjct: 238 R------DLVEKLLV-LDATKRLGCEEMEGYGPLKAHPFFE 271
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 142/281 (50%), Gaps = 36/281 (12%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK-----KVLRE-KMPN-TIERDIMVKSKCP 68
DF + + +G+F + L E + + +K +++E K+P T ERD+M + P
Sbjct: 11 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 70
Query: 69 YIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHG 128
+ V L+++FQD +YF + Y G+ + + G E+ RFY E+ A++YLHG
Sbjct: 71 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHG 128
Query: 129 LGYVHRDIKPDNMLLSATGHLKLTDFGSATQV---DKNGRIKSIVPVGTPEYVAPEVLEW 185
G +HRD+KP+N+LL+ H+++TDFG+A + K R VGT +YV+PE+L
Sbjct: 129 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF--VGTAQYVSPELLT- 185
Query: 186 MEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSI 245
S DLW++G + Y+L+ G PF + + I+ + + F
Sbjct: 186 ------EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKA 239
Query: 246 RLSTAMVNFVQSLVQKLDA--RLNMDQVLG------HPVFD 278
R + V+ L+ LDA RL +++ G HP F+
Sbjct: 240 R------DLVEKLLV-LDATKRLGCEEMEGYGPLKAHPFFE 273
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 143/281 (50%), Gaps = 36/281 (12%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK-----KVLRE-KMPN-TIERDIMVKSKCP 68
DF + + +G+F + L E + + +K +++E K+P T ERD+M + P
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 69 YIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHG 128
+ V L+++FQD +YF + Y G + + G E+ RFY E+ A++YLHG
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKI--GSFDETCTRFYTAEIVSALEYLHG 150
Query: 129 LGYVHRDIKPDNMLLSATGHLKLTDFGSATQV---DKNGRIKSIVPVGTPEYVAPEVLEW 185
G +HRD+KP+N+LL+ H+++TDFG+A + K R S VGT +YV+PE+L
Sbjct: 151 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSF--VGTAQYVSPELLT- 207
Query: 186 MEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSI 245
+ S DLW++G + Y+L+ G PF + + I+ + + F
Sbjct: 208 ------EKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKA 261
Query: 246 RLSTAMVNFVQSLVQKLDA--RLNMDQVLG------HPVFD 278
R + V+ L+ LDA RL +++ G HP F+
Sbjct: 262 R------DLVEKLLV-LDATKRLGCEEMEGYGPLKAHPFFE 295
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 142/281 (50%), Gaps = 36/281 (12%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK-----KVLRE-KMPN-TIERDIMVKSKCP 68
DF + + +G+F + L E + + +K +++E K+P T ERD+M + P
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 69 YIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHG 128
+ V L+++FQD +YF + Y G+ + + G E+ RFY E+ A++YLHG
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHG 150
Query: 129 LGYVHRDIKPDNMLLSATGHLKLTDFGSATQV---DKNGRIKSIVPVGTPEYVAPEVLEW 185
G +HRD+KP+N+LL+ H+++TDFG+A + K R VGT +YV+PE+L
Sbjct: 151 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF--VGTAQYVSPELLT- 207
Query: 186 MEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSI 245
S DLW++G + Y+L+ G PF + + I+ + + F
Sbjct: 208 ------EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKA 261
Query: 246 RLSTAMVNFVQSLVQKLDA--RLNMDQVLG------HPVFD 278
R + V+ L+ LDA RL +++ G HP F+
Sbjct: 262 R------DLVEKLLV-LDATKRLGCEEMEGYGPLKAHPFFE 295
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 142/281 (50%), Gaps = 36/281 (12%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK-----KVLRE-KMPN-TIERDIMVKSKCP 68
DF + + +G+F + L E + + +K +++E K+P T ERD+M + P
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 69 YIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHG 128
+ V L+++FQD +YF + Y G+ + + G E+ RFY E+ A++YLHG
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHG 150
Query: 129 LGYVHRDIKPDNMLLSATGHLKLTDFGSATQV---DKNGRIKSIVPVGTPEYVAPEVLEW 185
G +HRD+KP+N+LL+ H+++TDFG+A + K R VGT +YV+PE+L
Sbjct: 151 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF--VGTAQYVSPELLT- 207
Query: 186 MEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSI 245
S DLW++G + Y+L+ G PF + + I+ + + F
Sbjct: 208 ------EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKA 261
Query: 246 RLSTAMVNFVQSLVQKLDA--RLNMDQVLG------HPVFD 278
R + V+ L+ LDA RL +++ G HP F+
Sbjct: 262 R------DLVEKLLV-LDATKRLGCEEMEGYGPLKAHPFFE 295
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 136/286 (47%), Gaps = 26/286 (9%)
Query: 7 LRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP-----NTIERDI 61
L + + DF+I R + +G FG++YL EKQS +K + + ++ + + R++
Sbjct: 3 LGSRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 62
Query: 62 MVKS--KCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYEL 119
++S + P I+ L+ F D VY I+EY G E Q E + YI EL
Sbjct: 63 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLG--TVYRELQKLSKFDEQRTATYITEL 120
Query: 120 AQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVA 179
A A+ Y H +HRDIKP+N+LL + G LK+ DFG + + R GT +Y+
Sbjct: 121 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDL---CGTLDYLP 177
Query: 180 PEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTV 239
PE++E + DLWS+GV+ YE L G PF T TY I +
Sbjct: 178 PEMIE-------GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI----SRVEF 226
Query: 240 SFPSSIRLSTAMVNFVQSLVQKLDA-RLNMDQVLGHPVFDCLDSDP 284
+FP + + + + L++ + R + +VL HP S P
Sbjct: 227 TFPDFV--TEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 270
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 142/281 (50%), Gaps = 36/281 (12%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK-----KVLRE-KMPN-TIERDIMVKSKCP 68
DF + + +G+F + L E + + +K +++E K+P T ERD+M + P
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 69 YIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHG 128
+ V L+++FQD +YF + Y G+ + + G E+ RFY E+ A++YLHG
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHG 148
Query: 129 LGYVHRDIKPDNMLLSATGHLKLTDFGSATQV---DKNGRIKSIVPVGTPEYVAPEVLEW 185
G +HRD+KP+N+LL+ H+++TDFG+A + K R VGT +YV+PE+L
Sbjct: 149 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF--VGTAQYVSPELLT- 205
Query: 186 MEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSI 245
S DLW++G + Y+L+ G PF + + I+ + + F
Sbjct: 206 ------EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKA 259
Query: 246 RLSTAMVNFVQSLVQKLDA--RLNMDQVLG------HPVFD 278
R + V+ L+ LDA RL +++ G HP F+
Sbjct: 260 R------DLVEKLLV-LDATKRLGCEEMEGYGPLKAHPFFE 293
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 142/281 (50%), Gaps = 36/281 (12%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK-----KVLRE-KMPN-TIERDIMVKSKCP 68
DF + + +G+F + L E + + +K +++E K+P T ERD+M + P
Sbjct: 34 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 93
Query: 69 YIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHG 128
+ V L+++FQD +YF + Y G+ + + G E+ RFY E+ A++YLHG
Sbjct: 94 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHG 151
Query: 129 LGYVHRDIKPDNMLLSATGHLKLTDFGSATQV---DKNGRIKSIVPVGTPEYVAPEVLEW 185
G +HRD+KP+N+LL+ H+++TDFG+A + K R VGT +YV+PE+L
Sbjct: 152 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF--VGTAQYVSPELLT- 208
Query: 186 MEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSI 245
S DLW++G + Y+L+ G PF + + I+ + + F
Sbjct: 209 ------EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKA 262
Query: 246 RLSTAMVNFVQSLVQKLDA--RLNMDQVLG------HPVFD 278
R + V+ L+ LDA RL +++ G HP F+
Sbjct: 263 R------DLVEKLLV-LDATKRLGCEEMEGYGPLKAHPFFE 296
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 142/281 (50%), Gaps = 36/281 (12%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK-----KVLRE-KMPN-TIERDIMVKSKCP 68
DF + + +G+F + L E + + +K +++E K+P T ERD+M + P
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 69 YIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHG 128
+ V L+++FQD +YF + Y G+ + + G E+ RFY E+ A++YLHG
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHG 148
Query: 129 LGYVHRDIKPDNMLLSATGHLKLTDFGSATQV---DKNGRIKSIVPVGTPEYVAPEVLEW 185
G +HRD+KP+N+LL+ H+++TDFG+A + K R VGT +YV+PE+L
Sbjct: 149 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF--VGTAQYVSPELLT- 205
Query: 186 MEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSI 245
S DLW++G + Y+L+ G PF + + I+ + + F
Sbjct: 206 ------EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKA 259
Query: 246 RLSTAMVNFVQSLVQKLDA--RLNMDQVLG------HPVFD 278
R + V+ L+ LDA RL +++ G HP F+
Sbjct: 260 R------DLVEKLLV-LDATKRLGCEEMEGYGPLKAHPFFE 293
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/269 (32%), Positives = 140/269 (52%), Gaps = 24/269 (8%)
Query: 17 FDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPN---TIERDIMV--KSKCPYIV 71
+D + + G F ++ L E+K++ +K + +E + ++E +I V K K P IV
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 72 NLFYSFQDMNHVYFIMEYVTGGD-FVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLG 130
L ++ H+Y IM+ V+GG+ F ++E G+ +E A I+++ AV+YLH LG
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVEK---GFYTERDASRLIFQVLDAVKYLHDLG 136
Query: 131 YVHRDIKPDNML---LSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWME 187
VHRD+KP+N+L L + ++DFG + D + + GTP YVAPEVL
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLST--ACGTPGYVAPEVL---- 190
Query: 188 GNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRL 247
Y+ + D WSIGV++Y LL G PF E + IL + E P +
Sbjct: 191 ---AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYE--FDSPYWDDI 245
Query: 248 STAMVNFVQSLVQK-LDARLNMDQVLGHP 275
S + +F++ L++K + R +Q L HP
Sbjct: 246 SDSAKDFIRHLMEKDPEKRFTCEQALQHP 274
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 142/281 (50%), Gaps = 36/281 (12%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK-----KVLRE-KMPN-TIERDIMVKSKCP 68
DF + + +G+F + L E + + +K +++E K+P T ERD+M + P
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 69 YIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHG 128
+ V L+++FQD +YF + Y G+ + + G E+ RFY E+ A++YLHG
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHG 150
Query: 129 LGYVHRDIKPDNMLLSATGHLKLTDFGSATQV---DKNGRIKSIVPVGTPEYVAPEVLEW 185
G +HRD+KP+N+LL+ H+++TDFG+A + K R VGT +YV+PE+L
Sbjct: 151 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF--VGTAQYVSPELLT- 207
Query: 186 MEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSI 245
S DLW++G + Y+L+ G PF + + I+ + + F
Sbjct: 208 ------EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKA 261
Query: 246 RLSTAMVNFVQSLVQKLDA--RLNMDQVLG------HPVFD 278
R + V+ L+ LDA RL +++ G HP F+
Sbjct: 262 R------DLVEKLLV-LDATKRLGCEEMEGYGPLKAHPFFE 295
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 142/281 (50%), Gaps = 36/281 (12%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK-----KVLRE-KMPN-TIERDIMVKSKCP 68
DF + + +G+F + L E + + +K +++E K+P T ERD+M + P
Sbjct: 15 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 74
Query: 69 YIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHG 128
+ V L+++FQD +YF + Y G+ + + G E+ RFY E+ A++YLHG
Sbjct: 75 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHG 132
Query: 129 LGYVHRDIKPDNMLLSATGHLKLTDFGSATQV---DKNGRIKSIVPVGTPEYVAPEVLEW 185
G +HRD+KP+N+LL+ H+++TDFG+A + K R VGT +YV+PE+L
Sbjct: 133 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF--VGTAQYVSPELLT- 189
Query: 186 MEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSI 245
S DLW++G + Y+L+ G PF + + I+ + + F
Sbjct: 190 ------EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKA 243
Query: 246 RLSTAMVNFVQSLVQKLDA--RLNMDQVLG------HPVFD 278
R + V+ L+ LDA RL +++ G HP F+
Sbjct: 244 R------DLVEKLLV-LDATKRLGCEEMEGYGPLKAHPFFE 277
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 87/269 (32%), Positives = 140/269 (52%), Gaps = 24/269 (8%)
Query: 17 FDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPN---TIERDIMV--KSKCPYIV 71
+D + + G F ++ L E+K++ +K + +E + ++E +I V K K P IV
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 72 NLFYSFQDMNHVYFIMEYVTGGD-FVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLG 130
L ++ H+Y IM+ V+GG+ F ++E G+ +E A I+++ AV+YLH LG
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVEK---GFYTERDASRLIFQVLDAVKYLHDLG 136
Query: 131 YVHRDIKPDNML---LSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWME 187
VHRD+KP+N+L L + ++DFG + D + + GTP YVAPEVL
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLST--ACGTPGYVAPEVL---- 190
Query: 188 GNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRL 247
Y+ + D WSIGV++Y LL G PF E + IL + E P +
Sbjct: 191 ---AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYE--FDSPYWDDI 245
Query: 248 STAMVNFVQSLVQK-LDARLNMDQVLGHP 275
S + +F++ L++K + R +Q L HP
Sbjct: 246 SDSAKDFIRHLMEKDPEKRFTCEQALQHP 274
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 141/281 (50%), Gaps = 36/281 (12%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK-----KVLRE-KMPN-TIERDIMVKSKCP 68
DF + + +G+F + L E + + +K +++E K+P T ERD+M + P
Sbjct: 38 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 97
Query: 69 YIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHG 128
+ V L++ FQD +YF + Y G+ + + G E+ RFY E+ A++YLHG
Sbjct: 98 FFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHG 155
Query: 129 LGYVHRDIKPDNMLLSATGHLKLTDFGSATQV---DKNGRIKSIVPVGTPEYVAPEVLEW 185
G +HRD+KP+N+LL+ H+++TDFG+A + K R VGT +YV+PE+L
Sbjct: 156 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF--VGTAQYVSPELLT- 212
Query: 186 MEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSI 245
S DLW++G + Y+L+ G PF + + I+ + + F
Sbjct: 213 ------EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKA 266
Query: 246 RLSTAMVNFVQSLVQKLDA--RLNMDQVLG------HPVFD 278
R + V+ L+ LDA RL +++ G HP F+
Sbjct: 267 R------DLVEKLLV-LDATKRLGCEEMEGYGPLKAHPFFE 300
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 131/238 (55%), Gaps = 26/238 (10%)
Query: 3 VVKELRQKN-------VSASDFDIKRFIQQGNFGDIYLVEEKQSHNTF------VMKKV- 48
V ELR N V +F++ + + G +G ++LV + H+T V+KK
Sbjct: 35 VKHELRTANLTGHAEKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKAT 94
Query: 49 LREKMPNT----IERDIMVKSK-CPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQP 103
+ +K T ER ++ + P++V L Y+FQ ++ I++Y+ GG+ T L +
Sbjct: 95 IVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRE 154
Query: 104 HGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKN 163
+E + + Y+ E+ A+++LH LG ++RDIK +N+LL + GH+ LTDFG + + +
Sbjct: 155 R--FTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVAD 212
Query: 164 GRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYE 221
++ GT EY+AP+++ G G+ + D WS+GV+ YELLTG++PF +
Sbjct: 213 ETERAYDFCGTIEYMAPDIVRG-----GDSGHDKAVDWWSLGVLMYELLTGASPFTVD 265
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 149/315 (47%), Gaps = 52/315 (16%)
Query: 11 NVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK----KVLREKMPNTIERD--IMVK 64
+++ +DF + R I +G FG++Y + + + MK K ++ K T+ + IM+
Sbjct: 184 HLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLS 243
Query: 65 ----SKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELA 120
CP+IV + Y+F + + FI++ + GGD L HG SE+ RFY E+
Sbjct: 244 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQ--HGVFSEADMRFYAAEII 301
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAP 180
++++H V+RD+KP N+LL GH++++D G A K K VGT Y+AP
Sbjct: 302 LGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK---KPHASVGTHGYMAP 358
Query: 181 EVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFN-------YETLDMTYSSILAC 233
EVL+ Y S D +S+G + ++LL G +PF +E MT +
Sbjct: 359 EVLQ------KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM---- 408
Query: 234 DTEDTVSFPSSIRLSTAMVNFVQSLVQK-LDARLNM-----DQVLGHPVFDCLD------ 281
V P S S + + ++ L+Q+ ++ RL +V P F LD
Sbjct: 409 ----AVELPDS--FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFL 462
Query: 282 --SDPPCIPPPSQEN 294
PP IPP + N
Sbjct: 463 QKYPPPLIPPRGEVN 477
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 142/281 (50%), Gaps = 36/281 (12%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK-----KVLRE-KMPN-TIERDIMVKSKCP 68
DF + + +G+F + L E + + +K +++E K+P T ERD+M + P
Sbjct: 30 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 89
Query: 69 YIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHG 128
+ V L+++FQD +YF + Y G+ + + G E+ RFY E+ A++YLHG
Sbjct: 90 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHG 147
Query: 129 LGYVHRDIKPDNMLLSATGHLKLTDFGSATQV---DKNGRIKSIVPVGTPEYVAPEVLEW 185
G +HRD+KP+N+LL+ H+++TDFG+A + K R VGT +YV+PE+L
Sbjct: 148 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF--VGTAQYVSPELLT- 204
Query: 186 MEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSI 245
S DLW++G + Y+L+ G PF + + I+ + + F
Sbjct: 205 ------EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKA 258
Query: 246 RLSTAMVNFVQSLVQKLDA--RLNMDQVLG------HPVFD 278
R + V+ L+ LDA RL +++ G HP F+
Sbjct: 259 R------DLVEKLLV-LDATKRLGCEEMEGYGPLKAHPFFE 292
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 149/315 (47%), Gaps = 52/315 (16%)
Query: 11 NVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK----KVLREKMPNTIERD--IMVK 64
+++ +DF + R I +G FG++Y + + + MK K ++ K T+ + IM+
Sbjct: 185 HLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLS 244
Query: 65 ----SKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELA 120
CP+IV + Y+F + + FI++ + GGD L HG SE+ RFY E+
Sbjct: 245 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQ--HGVFSEADMRFYAAEII 302
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAP 180
++++H V+RD+KP N+LL GH++++D G A K K VGT Y+AP
Sbjct: 303 LGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK---KPHASVGTHGYMAP 359
Query: 181 EVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFN-------YETLDMTYSSILAC 233
EVL+ Y S D +S+G + ++LL G +PF +E MT +
Sbjct: 360 EVLQ------KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM---- 409
Query: 234 DTEDTVSFPSSIRLSTAMVNFVQSLVQK-LDARLNM-----DQVLGHPVFDCLD------ 281
V P S S + + ++ L+Q+ ++ RL +V P F LD
Sbjct: 410 ----AVELPDS--FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFL 463
Query: 282 --SDPPCIPPPSQEN 294
PP IPP + N
Sbjct: 464 QKYPPPLIPPRGEVN 478
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 135/284 (47%), Gaps = 26/284 (9%)
Query: 9 QKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP-----NTIERDIMV 63
++ + DF+I R + +G FG++YL EK S +K + + ++ + + R++ +
Sbjct: 2 KRQWALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 64 KS--KCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQ 121
+S + P I+ L+ F D VY I+EY G E Q E + YI ELA
Sbjct: 62 QSHLRHPNILRLYGYFHDSTRVYLILEYAPLG--TVYRELQKLSKFDEQRTATYITELAN 119
Query: 122 AVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPE 181
A+ Y H +HRDIKP+N+LL + G LK+ DFG + + R GT +Y+ PE
Sbjct: 120 ALSYCHSKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAAL---CGTLDYLPPE 176
Query: 182 VLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSF 241
++E + DLWS+GV+ YE L G PF T TY I + +F
Sbjct: 177 MIE-------GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRI----SRVEFTF 225
Query: 242 PSSIRLSTAMVNFVQSLVQKLDA-RLNMDQVLGHPVFDCLDSDP 284
P + + + + L++ + R + +VL HP S P
Sbjct: 226 PDFV--TEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 267
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 149/315 (47%), Gaps = 52/315 (16%)
Query: 11 NVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK----KVLREKMPNTIERD--IMVK 64
+++ +DF + R I +G FG++Y + + + MK K ++ K T+ + IM+
Sbjct: 185 HLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLS 244
Query: 65 ----SKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELA 120
CP+IV + Y+F + + FI++ + GGD L HG SE+ RFY E+
Sbjct: 245 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQ--HGVFSEADMRFYAAEII 302
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAP 180
++++H V+RD+KP N+LL GH++++D G A K K VGT Y+AP
Sbjct: 303 LGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK---KPHASVGTHGYMAP 359
Query: 181 EVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFN-------YETLDMTYSSILAC 233
EVL+ Y S D +S+G + ++LL G +PF +E MT +
Sbjct: 360 EVLQ------KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM---- 409
Query: 234 DTEDTVSFPSSIRLSTAMVNFVQSLVQK-LDARLNM-----DQVLGHPVFDCLD------ 281
V P S S + + ++ L+Q+ ++ RL +V P F LD
Sbjct: 410 ----AVELPDS--FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFL 463
Query: 282 --SDPPCIPPPSQEN 294
PP IPP + N
Sbjct: 464 QKYPPPLIPPRGEVN 478
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 149/315 (47%), Gaps = 52/315 (16%)
Query: 11 NVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK----KVLREKMPNTIERD--IMVK 64
+++ +DF + R I +G FG++Y + + + MK K ++ K T+ + IM+
Sbjct: 185 HLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLS 244
Query: 65 ----SKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELA 120
CP+IV + Y+F + + FI++ + GGD L HG SE+ RFY E+
Sbjct: 245 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQ--HGVFSEADMRFYAAEII 302
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAP 180
++++H V+RD+KP N+LL GH++++D G A K K VGT Y+AP
Sbjct: 303 LGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK---KPHASVGTHGYMAP 359
Query: 181 EVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFN-------YETLDMTYSSILAC 233
EVL+ Y S D +S+G + ++LL G +PF +E MT +
Sbjct: 360 EVLQ------KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM---- 409
Query: 234 DTEDTVSFPSSIRLSTAMVNFVQSLVQK-LDARLNM-----DQVLGHPVFDCLD------ 281
V P S S + + ++ L+Q+ ++ RL +V P F LD
Sbjct: 410 ----AVELPDS--FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFL 463
Query: 282 --SDPPCIPPPSQEN 294
PP IPP + N
Sbjct: 464 QKYPPPLIPPRGEVN 478
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 87/269 (32%), Positives = 140/269 (52%), Gaps = 24/269 (8%)
Query: 17 FDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPN---TIERDIMV--KSKCPYIV 71
+D + + G F ++ L E+K++ +K + +E + ++E +I V K K P IV
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 72 NLFYSFQDMNHVYFIMEYVTGGD-FVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLG 130
L ++ H+Y IM+ V+GG+ F ++E G+ +E A I+++ AV+YLH LG
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVEK---GFYTERDASRLIFQVLDAVKYLHDLG 136
Query: 131 YVHRDIKPDNML---LSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWME 187
VHRD+KP+N+L L + ++DFG + D + + GTP YVAPEVL
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLST--ACGTPGYVAPEVL---- 190
Query: 188 GNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRL 247
Y+ + D WSIGV++Y LL G PF E + IL + E P +
Sbjct: 191 ---AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYE--FDSPYWDDI 245
Query: 248 STAMVNFVQSLVQK-LDARLNMDQVLGHP 275
S + +F++ L++K + R +Q L HP
Sbjct: 246 SDSAKDFIRHLMEKDPEKRFTCEQALQHP 274
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 141/281 (50%), Gaps = 36/281 (12%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK-----KVLRE-KMPN-TIERDIMVKSKCP 68
DF + + +G+F L E + + +K +++E K+P T ERD+M + P
Sbjct: 31 DFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 69 YIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHG 128
+ V L+++FQD +YF + Y G+ + + G E+ RFY E+ A++YLHG
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHG 148
Query: 129 LGYVHRDIKPDNMLLSATGHLKLTDFGSATQV---DKNGRIKSIVPVGTPEYVAPEVLEW 185
G +HRD+KP+N+LL+ H+++TDFG+A + K R VGT +YV+PE+L
Sbjct: 149 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF--VGTAQYVSPELLT- 205
Query: 186 MEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSI 245
S DLW++G + Y+L+ G PF + + I+ + + F
Sbjct: 206 ------EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKA 259
Query: 246 RLSTAMVNFVQSLVQKLDA--RLNMDQVLG------HPVFD 278
R + V+ L+ LDA RL +++ G HP F+
Sbjct: 260 R------DLVEKLLV-LDATKRLGCEEMEGYGPLKAHPFFE 293
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 111/222 (50%), Gaps = 19/222 (8%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP-----NTIERDIMVKS--KCP 68
DF+I R + +G FG++YL EKQ +K + + ++ + + R++ ++S + P
Sbjct: 6 DFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 65
Query: 69 YIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHG 128
I+ L+ F D VY I+EY G E Q E + YI ELA A+ Y H
Sbjct: 66 NILRLYGYFHDATRVYLILEYAPLG--TVYRELQKLSKFDEQRTATYITELANALSYCHS 123
Query: 129 LGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEG 188
+HRDIKP+N+LL + G LK+ DFG + + R GT +Y+ PE++E
Sbjct: 124 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL---CGTLDYLPPEMIE---- 176
Query: 189 NHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSI 230
+ DLWS+GV+ YE L G PF T TY I
Sbjct: 177 ---GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 215
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/274 (32%), Positives = 141/274 (51%), Gaps = 26/274 (9%)
Query: 10 KNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLR-----EKMPNTIERDIMVK 64
++ + DF+I R + +G FG++YL EK+SH +K + + E + + + R+I ++
Sbjct: 18 RHFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQ 77
Query: 65 SKC--PYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQA 122
+ P I+ L+ F D +Y I+EY G+ E Q E + + ELA A
Sbjct: 78 AHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYK--ELQKSCTFDEQRTATIMEELADA 135
Query: 123 VQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV 182
+ Y HG +HRDIKP+N+LL G LK+ DFG + R K++ GT +Y+ PE+
Sbjct: 136 LMYCHGKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRR-KTM--CGTLDYLPPEM 192
Query: 183 LEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFP 242
+E N DLW IGV+ YELL G+ PF + + TY I+ D + FP
Sbjct: 193 IEGRMHNE-------KVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVD----LKFP 241
Query: 243 SSIRLSTAMVNFVQSLVQKLDA-RLNMDQVLGHP 275
+S+ T + + L++ + RL + QV HP
Sbjct: 242 ASV--PTGAQDLISKLLRHNPSERLPLAQVSAHP 273
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/269 (32%), Positives = 143/269 (53%), Gaps = 24/269 (8%)
Query: 17 FDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPN---TIERDIMV--KSKCPYIV 71
+D + + G F ++ L E+K++ +K + ++ + ++E +I V K K P IV
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 72 NLFYSFQDMNHVYFIMEYVTGGD-FVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLG 130
L ++ H+Y IM+ V+GG+ F ++E G+ +E A I+++ AV+YLH LG
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVEK---GFYTERDASRLIFQVLDAVKYLHDLG 136
Query: 131 YVHRDIKPDNML---LSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWME 187
VHRD+KP+N+L L + ++DFG ++++ G + S GTP YVAPEVL
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFG-LSKMEDPGSVLSTA-CGTPGYVAPEVL---- 190
Query: 188 GNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRL 247
Y+ + D WSIGV++Y LL G PF E + IL + E P +
Sbjct: 191 ---AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYE--FDSPYWDDI 245
Query: 248 STAMVNFVQSLVQK-LDARLNMDQVLGHP 275
S + +F++ L++K + R +Q L HP
Sbjct: 246 SDSAKDFIRHLMEKDPEKRFTCEQALQHP 274
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 143/267 (53%), Gaps = 21/267 (7%)
Query: 17 FDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVL--REKMPNTIERDIMVKS--KCPYIVN 72
+DI + G FG ++ V E+ + N F K V+ E T+ ++I S + P +VN
Sbjct: 53 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVN 112
Query: 73 LFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYV 132
L +F+D N + I E+++GG+ + ++ H +SE +A Y+ ++ + + ++H YV
Sbjct: 113 LHDAFEDDNEMVMIYEFMSGGELFEKVADE-HNKMSEDEAVEYMRQVCKGLCHMHENNYV 171
Query: 133 HRDIKPDNMLLSA--TGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNH 190
H D+KP+N++ + + LKL DFG +D +K V GT E+ APEV E +
Sbjct: 172 HLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK--VTTGTAEFAAPEVAEGKPVGY 229
Query: 191 GSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTE-DTVSFPSSIRLST 249
YT D+WS+GV+SY LL+G +PF E D T ++ +CD D +F +S
Sbjct: 230 ----YT---DMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSG---ISE 279
Query: 250 AMVNFVQS-LVQKLDARLNMDQVLGHP 275
+F++ L+ + R+ + Q L HP
Sbjct: 280 DGKDFIRKLLLADPNTRMTIHQALEHP 306
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 142/269 (52%), Gaps = 24/269 (8%)
Query: 17 FDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP---NTIERDIMVKSKCPY--IV 71
F+ K + G F ++ L EEK + F +K + ++ + ++IE +I V K + IV
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIV 83
Query: 72 NLFYSFQDMNHVYFIMEYVTGGD-FVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLG 130
L ++ NH+Y +M+ V+GG+ F ++E G+ +E A I ++ AV YLH +G
Sbjct: 84 ALEDIYESPNHLYLVMQLVSGGELFDRIVEK---GFYTEKDASTLIRQVLDAVYYLHRMG 140
Query: 131 YVHRDIKPDNMLLSAT---GHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWME 187
VHRD+KP+N+L + + ++DFG ++++ G + S GTP YVAPEVL
Sbjct: 141 IVHRDLKPENLLYYSQDEESKIMISDFG-LSKMEGKGDVMS-TACGTPGYVAPEVL---- 194
Query: 188 GNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRL 247
Y+ + D WSIGV++Y LL G PF E + IL + E P +
Sbjct: 195 ---AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYE--FDSPYWDDI 249
Query: 248 STAMVNFVQSLVQK-LDARLNMDQVLGHP 275
S + +F+++L++K + R +Q HP
Sbjct: 250 SDSAKDFIRNLMEKDPNKRYTCEQAARHP 278
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 143/267 (53%), Gaps = 21/267 (7%)
Query: 17 FDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVL--REKMPNTIERDIMVKS--KCPYIVN 72
+DI + G FG ++ V E+ + N F K V+ E T+ ++I S + P +VN
Sbjct: 159 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVN 218
Query: 73 LFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYV 132
L +F+D N + I E+++GG+ + ++ H +SE +A Y+ ++ + + ++H YV
Sbjct: 219 LHDAFEDDNEMVMIYEFMSGGELFEKVADE-HNKMSEDEAVEYMRQVCKGLCHMHENNYV 277
Query: 133 HRDIKPDNMLLSA--TGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNH 190
H D+KP+N++ + + LKL DFG +D +K V GT E+ APEV E +
Sbjct: 278 HLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK--VTTGTAEFAAPEVAEGKPVGY 335
Query: 191 GSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTE-DTVSFPSSIRLST 249
YT D+WS+GV+SY LL+G +PF E D T ++ +CD D +F +S
Sbjct: 336 ----YT---DMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSG---ISE 385
Query: 250 AMVNFVQS-LVQKLDARLNMDQVLGHP 275
+F++ L+ + R+ + Q L HP
Sbjct: 386 DGKDFIRKLLLADPNTRMTIHQALEHP 412
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 139/268 (51%), Gaps = 23/268 (8%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKM--PNTIER-----DIMVKSKCP 68
DF + + +G+F +Y E + +K + ++ M ++R I + K P
Sbjct: 12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHP 71
Query: 69 YIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHG 128
I+ L+ F+D N+VY ++E G+ L+N+ + SE++AR +++++ + YLH
Sbjct: 72 SILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPF-SENEARHFMHQIITGMLYLHS 130
Query: 129 LGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEG 188
G +HRD+ N+LL+ ++K+ DFG ATQ+ K K GTP Y++PE+
Sbjct: 131 HGILHRDLTLSNLLLTRNMNIKIADFGLATQL-KMPHEKHYTLCGTPNYISPEIAT--RS 187
Query: 189 NHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRLS 248
HG + D+WS+G + Y LL G PF+ +T+ T + ++ D E PS LS
Sbjct: 188 AHGLES-----DVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYE----MPSF--LS 236
Query: 249 TAMVNFVQSLVQKLDA-RLNMDQVLGHP 275
+ + L+++ A RL++ VL HP
Sbjct: 237 IEAKDLIHQLLRRNPADRLSLSSVLDHP 264
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 118/222 (53%), Gaps = 20/222 (9%)
Query: 16 DFDIK-RFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMVKSKC---PYIV 71
D D+K + + +G+F K+S+ F +K ++ ++M +++I C P IV
Sbjct: 11 DLDLKDKPLGEGSFSICRKCVHKKSNQAFAVK-IISKRMEANTQKEITALKLCEGHPNIV 69
Query: 72 NLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGY 131
L F D H + +ME + GG+ ++ + H SE++A + + +L AV ++H +G
Sbjct: 70 KLHEVFHDQLHTFLVMELLNGGELFERIKKKKH--FSETEASYIMRKLVSAVSHMHDVGV 127
Query: 132 VHRDIKPDNMLLSATG---HLKLTDFGSA-TQVDKNGRIKSIVPVGTPEYVAPEVLEWME 187
VHRD+KP+N+L + +K+ DFG A + N +K+ P T Y APE+L
Sbjct: 128 VHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKT--PCFTLHYAAPELLN--- 182
Query: 188 GNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSS 229
+GY SCDLWS+GV+ Y +L+G PF +T +S
Sbjct: 183 ----QNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTS 220
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 140/275 (50%), Gaps = 32/275 (11%)
Query: 17 FDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP----NTIERDIMVKSKCPY--I 70
F + G F +++LV+++ + F +K + +K P +++E +I V K + I
Sbjct: 11 FIFMEVLGSGAFSEVFLVKQRLTGKLFALKCI--KKSPAFRDSSLENEIAVLKKIKHENI 68
Query: 71 VNLFYSFQDMNHVYFIMEYVTGGD-FVTLLENQPHGYLSESKARFYIYELAQAVQYLHGL 129
V L ++ H Y +M+ V+GG+ F +LE G +E A I ++ AV+YLH
Sbjct: 69 VTLEDIYESTTHYYLVMQLVSGGELFDRILER---GVYTEKDASLVIQQVLSAVKYLHEN 125
Query: 130 GYVHRDIKPDNMLLSA---TGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWM 186
G VHRD+KP+N+L + +TDFG +++++NG + + GTP YVAPEVL
Sbjct: 126 GIVHRDLKPENLLYLTPEENSKIMITDFG-LSKMEQNGIMST--ACGTPGYVAPEVL--- 179
Query: 187 EGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIR 246
Y+ + D WSIGV++Y LL G PF ET + I E F S
Sbjct: 180 ----AQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKI----KEGYYEFESPFW 231
Query: 247 --LSTAMVNFVQSLVQK-LDARLNMDQVLGHPVFD 278
+S + +F+ L++K + R ++ L HP D
Sbjct: 232 DDISESAKDFICHLLEKDPNERYTCEKALSHPWID 266
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 114/199 (57%), Gaps = 16/199 (8%)
Query: 67 CPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYL 126
CP ++NL +++ + + I+EY GG+ +L + +SE+ I ++ + V YL
Sbjct: 88 CPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYL 147
Query: 127 HGLGYVHRDIKPDNMLLSAT---GHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVL 183
H VH D+KP N+LLS+ G +K+ DFG + ++ ++ I +GTPEY+APE+L
Sbjct: 148 HQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREI--MGTPEYLAPEIL 205
Query: 184 EWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDT-VSFP 242
+ D T + D+W+IG+++Y LLT ++PF E TY +I + + + +F
Sbjct: 206 NY-------DPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFS 258
Query: 243 SSIRLSTAMVNFVQSLVQK 261
S +L+T +F+QSL+ K
Sbjct: 259 SVSQLAT---DFIQSLLVK 274
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 126/223 (56%), Gaps = 18/223 (8%)
Query: 3 VVKELRQKNVSASD-FDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDI 61
+V++L + ++ +D +++K I G++ K ++ F +K + + K T E +I
Sbjct: 9 IVQQLHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEI 68
Query: 62 MVK-SKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELA 120
+++ + P I+ L + D +VY + E + GG+ + + Q + SE +A ++ +
Sbjct: 69 LLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQK--FFSEREASAVLFTIT 126
Query: 121 QAVQYLHGLGYVHRDIKPDNML-LSATGH---LKLTDFGSATQV-DKNGRIKSIVPVGTP 175
+ V+YLH G VHRD+KP N+L + +G+ +++ DFG A Q+ +NG + + P T
Sbjct: 127 KTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLL--MTPCYTA 184
Query: 176 EYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
+VAPEVLE GY +CD+WS+GV+ Y +LTG TPF
Sbjct: 185 NFVAPEVLE-------RQGYDAACDIWSLGVLLYTMLTGYTPF 220
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 130/265 (49%), Gaps = 21/265 (7%)
Query: 17 FDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMVKSKC--PYIVNLF 74
FD+ + +G++G +Y K++ +K+V E I ++I + +C P++V +
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYY 90
Query: 75 YSFQDMNHVYFIMEYVTGGDF--VTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYV 132
S+ ++ +MEY G + L N+ L+E + + + ++YLH + +
Sbjct: 91 GSYFKNTDLWIVMEYCGAGSVSDIIRLRNK---TLTEDEIATILQSTLKGLEYLHFMRKI 147
Query: 133 HRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGS 192
HRDIK N+LL+ GH KL DFG A Q+ ++ V +GTP ++APEV++ +
Sbjct: 148 HRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXV-IGTPFWMAPEVIQEI------ 200
Query: 193 DGYTGSCDLWSIGVVSYELLTGSTPFNYETLDM-TYSSILACDTEDTVSFPSSIRLSTAM 251
GY D+WS+G+ + E+ G P+ D+ +I T +F S
Sbjct: 201 -GYNCVADIWSLGITAIEMAEGKPPYA----DIHPMRAIFMIPTNPPPTFRKPELWSDNF 255
Query: 252 VNFV-QSLVQKLDARLNMDQVLGHP 275
+FV Q LV+ + R Q+L HP
Sbjct: 256 TDFVKQCLVKSPEQRATATQLLQHP 280
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 124/233 (53%), Gaps = 20/233 (8%)
Query: 57 IERDIMVKSKC--PYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARF 114
IER++ + + P I+ L +++ V I+E V+GG+ L + LSE +A
Sbjct: 62 IEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATS 119
Query: 115 YIYELAQAVQYLHGLGYVHRDIKPDNMLL----SATGHLKLTDFGSATQVDKNGRIKSIV 170
+I ++ V YLH H D+KP+N++L H+KL DFG A +++ K+I
Sbjct: 120 FIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF 179
Query: 171 PVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSI 230
GTPE+VAPE++ N+ G D+WSIGV++Y LL+G++PF +T T ++I
Sbjct: 180 --GTPEFVAPEIV-----NYEPLGL--EADMWSIGVITYILLSGASPFLGDTKQETLANI 230
Query: 231 LACDTEDTVSFPSSIRLSTAMVNFVQS-LVQKLDARLNMDQVLGHPVFDCLDS 282
A + F S + S +F++ LV++ RL + + L HP +D+
Sbjct: 231 TAVSYDFDEEFFS--QTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDT 281
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 124/223 (55%), Gaps = 18/223 (8%)
Query: 3 VVKELRQKNVSASD-FDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDI 61
+V++L + ++ +D +++K I G++ K ++ F +K + + K T E +I
Sbjct: 9 IVQQLHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEI 68
Query: 62 MVK-SKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELA 120
+++ + P I+ L + D +VY + E GG+ + + Q + SE +A ++ +
Sbjct: 69 LLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQK--FFSEREASAVLFTIT 126
Query: 121 QAVQYLHGLGYVHRDIKPDNML-LSATGH---LKLTDFGSATQV-DKNGRIKSIVPVGTP 175
+ V+YLH G VHRD+KP N+L + +G+ +++ DFG A Q+ +NG + + P T
Sbjct: 127 KTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXT--PCYTA 184
Query: 176 EYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
+VAPEVLE GY +CD+WS+GV+ Y LTG TPF
Sbjct: 185 NFVAPEVLE-------RQGYDAACDIWSLGVLLYTXLTGYTPF 220
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 117/221 (52%), Gaps = 23/221 (10%)
Query: 9 QKNVSASDFDI-KRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMV---K 64
+KN D+ + + + G G + + K++ F +K + + P R++ +
Sbjct: 55 KKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALK--MLQDCPKA-RREVELHWRA 111
Query: 65 SKCPYIVNLFYSFQDM----NHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELA 120
S+CP+IV + ++++ + +ME + GG+ + ++++ +E +A + +
Sbjct: 112 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 171
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSA---TGHLKLTDFGSATQVDKNGRIKSIVPVGTPEY 177
+A+QYLH + HRD+KP+N+L ++ LKLTDFG A + + + + P TP Y
Sbjct: 172 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT--PCYTPYY 229
Query: 178 VAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
VAPEVL G + Y SCD+WS+GV+ Y LL G PF
Sbjct: 230 VAPEVL-------GPEKYDKSCDMWSLGVIMYILLCGYPPF 263
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 117/221 (52%), Gaps = 23/221 (10%)
Query: 9 QKNVSASDFDI-KRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMVK--- 64
+KN D+ + + + G G + + K++ F +K + + P R++ +
Sbjct: 61 KKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALK--MLQDCPKA-RREVELHWRA 117
Query: 65 SKCPYIVNLFYSFQDM----NHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELA 120
S+CP+IV + ++++ + +ME + GG+ + ++++ +E +A + +
Sbjct: 118 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 177
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSA---TGHLKLTDFGSATQVDKNGRIKSIVPVGTPEY 177
+A+QYLH + HRD+KP+N+L ++ LKLTDFG A + + + + P TP Y
Sbjct: 178 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT--PCYTPYY 235
Query: 178 VAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
VAPEVL G + Y SCD+WS+GV+ Y LL G PF
Sbjct: 236 VAPEVL-------GPEKYDKSCDMWSLGVIMYILLCGYPPF 269
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 117/221 (52%), Gaps = 23/221 (10%)
Query: 9 QKNVSASDFDI-KRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMVK--- 64
+KN D+ + + + G G + + K++ F +K + + P R++ +
Sbjct: 11 KKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALK--MLQDCPKA-RREVELHWRA 67
Query: 65 SKCPYIVNLFYSFQDM----NHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELA 120
S+CP+IV + ++++ + +ME + GG+ + ++++ +E +A + +
Sbjct: 68 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 127
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSA---TGHLKLTDFGSATQVDKNGRIKSIVPVGTPEY 177
+A+QYLH + HRD+KP+N+L ++ LKLTDFG A + + + + P TP Y
Sbjct: 128 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT--PCYTPYY 185
Query: 178 VAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
VAPEVL G + Y SCD+WS+GV+ Y LL G PF
Sbjct: 186 VAPEVL-------GPEKYDKSCDMWSLGVIMYILLCGYPPF 219
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 117/221 (52%), Gaps = 23/221 (10%)
Query: 9 QKNVSASDFDI-KRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMV---K 64
+KN D+ + + + G G + + K++ F +K + + P R++ +
Sbjct: 9 KKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALK--MLQDCPKA-RREVELHWRA 65
Query: 65 SKCPYIVNLFYSFQDM----NHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELA 120
S+CP+IV + ++++ + +ME + GG+ + ++++ +E +A + +
Sbjct: 66 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 125
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSA---TGHLKLTDFGSATQVDKNGRIKSIVPVGTPEY 177
+A+QYLH + HRD+KP+N+L ++ LKLTDFG A + + + + P TP Y
Sbjct: 126 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT--PCYTPYY 183
Query: 178 VAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
VAPEVL G + Y SCD+WS+GV+ Y LL G PF
Sbjct: 184 VAPEVL-------GPEKYDKSCDMWSLGVIMYILLCGYPPF 217
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 114/213 (53%), Gaps = 10/213 (4%)
Query: 68 PYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLH 127
P+I+ L S++ + ++ + + + G+ L + LSE + R + L +AV +LH
Sbjct: 160 PHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEK--VALSEKETRSIMRSLLEAVSFLH 217
Query: 128 GLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEW-M 186
VHRD+KP+N+LL ++L+DFG + ++ +++ + GTP Y+APE+L+ M
Sbjct: 218 ANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLREL--CGTPGYLAPEILKCSM 275
Query: 187 EGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIR 246
+ H GY DLW+ GV+ + LL GS PF + + I+ + + S P
Sbjct: 276 DETH--PGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIM--EGQYQFSSPEWDD 331
Query: 247 LSTAMVNFVQSLVQ-KLDARLNMDQVLGHPVFD 278
S+ + + + L+Q +ARL +Q L HP F+
Sbjct: 332 RSSTVKDLISRLLQVDPEARLTAEQALQHPFFE 364
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 118/216 (54%), Gaps = 17/216 (7%)
Query: 9 QKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMVK-SKC 67
Q V + + +K I G++ + K ++ + +K + + K + E +I+++ +
Sbjct: 21 QSMVFSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQH 80
Query: 68 PYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLH 127
P I+ L + D HVY + E + GG+ + + Q + SE +A F ++ + + V+YLH
Sbjct: 81 PNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQK--FFSEREASFVLHTIGKTVEYLH 138
Query: 128 GLGYVHRDIKPDNML-LSATGH---LKLTDFGSATQV-DKNGRIKSIVPVGTPEYVAPEV 182
G VHRD+KP N+L + +G+ L++ DFG A Q+ +NG + + P T +VAPEV
Sbjct: 139 SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLL--MTPCYTANFVAPEV 196
Query: 183 LEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
L+ GY CD+WS+G++ Y +L G TPF
Sbjct: 197 LK-------RQGYDEGCDIWSLGILLYTMLAGYTPF 225
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 117/221 (52%), Gaps = 23/221 (10%)
Query: 9 QKNVSASDFDI-KRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMV---K 64
+KN D+ + + + G G + + K++ F +K + + P R++ +
Sbjct: 10 KKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALK--MLQDCPKA-RREVELHWRA 66
Query: 65 SKCPYIVNLFYSFQDM----NHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELA 120
S+CP+IV + ++++ + +ME + GG+ + ++++ +E +A + +
Sbjct: 67 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 126
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSA---TGHLKLTDFGSATQVDKNGRIKSIVPVGTPEY 177
+A+QYLH + HRD+KP+N+L ++ LKLTDFG A + + + + P TP Y
Sbjct: 127 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT--PCYTPYY 184
Query: 178 VAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
VAPEVL G + Y SCD+WS+GV+ Y LL G PF
Sbjct: 185 VAPEVL-------GPEKYDKSCDMWSLGVIMYILLCGYPPF 218
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 117/221 (52%), Gaps = 23/221 (10%)
Query: 9 QKNVSASDFDI-KRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMVK--- 64
+KN D+ + + + G G + + K++ F +K + + P R++ +
Sbjct: 11 KKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALK--MLQDCPKA-RREVELHWRA 67
Query: 65 SKCPYIVNLFYSFQDM----NHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELA 120
S+CP+IV + ++++ + +ME + GG+ + ++++ +E +A + +
Sbjct: 68 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 127
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSA---TGHLKLTDFGSATQVDKNGRIKSIVPVGTPEY 177
+A+QYLH + HRD+KP+N+L ++ LKLTDFG A + + + + P TP Y
Sbjct: 128 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT--PCYTPYY 185
Query: 178 VAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
VAPEVL G + Y SCD+WS+GV+ Y LL G PF
Sbjct: 186 VAPEVL-------GPEKYDKSCDMWSLGVIMYILLCGYPPF 219
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 117/221 (52%), Gaps = 23/221 (10%)
Query: 9 QKNVSASDFDI-KRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMV---K 64
+KN D+ + + + G G + + K++ F +K + + P R++ +
Sbjct: 16 KKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALK--MLQDCPKA-RREVELHWRA 72
Query: 65 SKCPYIVNLFYSFQDM----NHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELA 120
S+CP+IV + ++++ + +ME + GG+ + ++++ +E +A + +
Sbjct: 73 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 132
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSA---TGHLKLTDFGSATQVDKNGRIKSIVPVGTPEY 177
+A+QYLH + HRD+KP+N+L ++ LKLTDFG A + + + + P TP Y
Sbjct: 133 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT--PCYTPYY 190
Query: 178 VAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
VAPEVL G + Y SCD+WS+GV+ Y LL G PF
Sbjct: 191 VAPEVL-------GPEKYDKSCDMWSLGVIMYILLCGYPPF 224
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 117/221 (52%), Gaps = 23/221 (10%)
Query: 9 QKNVSASDFDI-KRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMV---K 64
+KN D+ + + + G G + + K++ F +K + + P R++ +
Sbjct: 15 KKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALK--MLQDCPKA-RREVELHWRA 71
Query: 65 SKCPYIVNLFYSFQDM----NHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELA 120
S+CP+IV + ++++ + +ME + GG+ + ++++ +E +A + +
Sbjct: 72 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 131
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSA---TGHLKLTDFGSATQVDKNGRIKSIVPVGTPEY 177
+A+QYLH + HRD+KP+N+L ++ LKLTDFG A + + + + P TP Y
Sbjct: 132 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT--PCYTPYY 189
Query: 178 VAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
VAPEVL G + Y SCD+WS+GV+ Y LL G PF
Sbjct: 190 VAPEVL-------GPEKYDKSCDMWSLGVIMYILLCGYPPF 223
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 117/213 (54%), Gaps = 17/213 (7%)
Query: 12 VSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMVK-SKCPYI 70
V + + +K I G++ + K ++ + +K + + K + E +I+++ + P I
Sbjct: 24 VFSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNI 83
Query: 71 VNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLG 130
+ L + D HVY + E + GG+ + + Q + SE +A F ++ + + V+YLH G
Sbjct: 84 ITLKDVYDDGKHVYLVTELMRGGELLDKILRQK--FFSEREASFVLHTIGKTVEYLHSQG 141
Query: 131 YVHRDIKPDNML-LSATGH---LKLTDFGSATQV-DKNGRIKSIVPVGTPEYVAPEVLEW 185
VHRD+KP N+L + +G+ L++ DFG A Q+ +NG + + P T +VAPEVL+
Sbjct: 142 VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLL--MTPCYTANFVAPEVLK- 198
Query: 186 MEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
GY CD+WS+G++ Y +L G TPF
Sbjct: 199 ------RQGYDEGCDIWSLGILLYTMLAGYTPF 225
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 117/221 (52%), Gaps = 23/221 (10%)
Query: 9 QKNVSASDFDI-KRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMV---K 64
+KN D+ + + + G G + + K++ F +K + + P R++ +
Sbjct: 17 KKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALK--MLQDCPKA-RREVELHWRA 73
Query: 65 SKCPYIVNLFYSFQDM----NHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELA 120
S+CP+IV + ++++ + +ME + GG+ + ++++ +E +A + +
Sbjct: 74 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 133
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSA---TGHLKLTDFGSATQVDKNGRIKSIVPVGTPEY 177
+A+QYLH + HRD+KP+N+L ++ LKLTDFG A + + + + P TP Y
Sbjct: 134 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT--PCYTPYY 191
Query: 178 VAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
VAPEVL G + Y SCD+WS+GV+ Y LL G PF
Sbjct: 192 VAPEVL-------GPEKYDKSCDMWSLGVIMYILLCGYPPF 225
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 116/221 (52%), Gaps = 23/221 (10%)
Query: 9 QKNVSASDFDI-KRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMV---K 64
+KN D+ + + + G G + + K++ F +K + + P R++ +
Sbjct: 9 KKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALK--MLQDCPKA-RREVELHWRA 65
Query: 65 SKCPYIVNLFYSFQDM----NHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELA 120
S+CP+IV + ++++ + +ME + GG+ + ++++ +E +A + +
Sbjct: 66 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 125
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSA---TGHLKLTDFGSATQVDKNGRIKSIVPVGTPEY 177
+A+QYLH + HRD+KP+N+L ++ LKLTDFG A + + + P TP Y
Sbjct: 126 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTE--PCYTPYY 183
Query: 178 VAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
VAPEVL G + Y SCD+WS+GV+ Y LL G PF
Sbjct: 184 VAPEVL-------GPEKYDKSCDMWSLGVIMYILLCGYPPF 217
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 117/221 (52%), Gaps = 23/221 (10%)
Query: 9 QKNVSASDFDI-KRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMV---K 64
+KN D+ + + + G G + + K++ F +K + + P R++ +
Sbjct: 25 KKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALK--MLQDCPKA-RREVELHWRA 81
Query: 65 SKCPYIVNLFYSFQDM----NHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELA 120
S+CP+IV + ++++ + +ME + GG+ + ++++ +E +A + +
Sbjct: 82 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 141
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSA---TGHLKLTDFGSATQVDKNGRIKSIVPVGTPEY 177
+A+QYLH + HRD+KP+N+L ++ LKLTDFG A + + + + P TP Y
Sbjct: 142 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT--PCYTPYY 199
Query: 178 VAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
VAPEVL G + Y SCD+WS+GV+ Y LL G PF
Sbjct: 200 VAPEVL-------GPEKYDKSCDMWSLGVIMYILLCGYPPF 233
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 111/216 (51%), Gaps = 18/216 (8%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKM-PNTIER-----DIMVKSKCP 68
++ + + I +GNF + L + +K + + ++ P ++++ IM P
Sbjct: 12 GNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHP 71
Query: 69 YIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHG 128
IV LF + +Y IMEY +GG+ L HG + E +AR ++ AVQY H
Sbjct: 72 NIVKLFEVIETEKTLYLIMEYASGGEVFDYL--VAHGRMKEKEARSKFRQIVSAVQYCHQ 129
Query: 129 LGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEG 188
VHRD+K +N+LL A ++K+ DFG + + G++ + G+P Y APE+ +
Sbjct: 130 KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTF--CGSPPYAAPELFQ---- 183
Query: 189 NHGSDGYTGS-CDLWSIGVVSYELLTGSTPFNYETL 223
Y G D+WS+GV+ Y L++GS PF+ + L
Sbjct: 184 ---GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL 216
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 150/324 (46%), Gaps = 42/324 (12%)
Query: 14 ASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPN----TIERDIMVKSKC-- 67
A ++I + +G+FG++ +++ + + +K + + N TI R++ + K
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 68 PYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLH 127
P I+ LF +D + Y + E TGG+ + + SE A I ++ + Y+H
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR--FSEHDAARIIKQVFSGITYMH 138
Query: 128 GLGYVHRDIKPDNMLLSAT---GHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLE 184
VHRD+KP+N+LL + +K+ DFG +T +N ++K +GT Y+APEVL
Sbjct: 139 KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKD--RIGTAYYIAPEVL- 195
Query: 185 WMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF----NYETLDMTYSSILACDTEDTVS 240
G+ Y CD+WS GV+ Y LL+G+ PF Y+ L + A D +
Sbjct: 196 -----RGT--YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRT 248
Query: 241 FPSSIR-LSTAMVNFVQSLVQKLDARLNMDQVLGHPVFDCLDSDPPCIPP-PSQENKFHK 298
+ L M+ F SL R+ Q L HP S+ P I PS E+
Sbjct: 249 ISDDAKDLIRKMLTFHPSL------RITATQCLEHPWIQKYSSETPTISDLPSLES---- 298
Query: 299 KDKRKASPSLKAFQKEGRYLDSAL 322
A +++ FQ E + +AL
Sbjct: 299 -----AMTNIRQFQAEKKLAQAAL 317
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 113/210 (53%), Gaps = 22/210 (10%)
Query: 20 KRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMVKS-------KCPYIVN 72
+R + +G+FG++ L ++K + +K + + ++ +++ +++ P I+
Sbjct: 31 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMK 90
Query: 73 LFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYV 132
L+ F+D + Y + E TGG+ + ++ SE A I ++ + Y+H V
Sbjct: 91 LYEFFEDKGYFYLVGEVYTGGELFDEIISRKR--FSEVDAARIIRQVLSGITYMHKNKIV 148
Query: 133 HRDIKPDNMLL---SATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGN 189
HRD+KP+N+LL S ++++ DFG +T + + ++K +GT Y+APEVL
Sbjct: 149 HRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKD--KIGTAYYIAPEVL------ 200
Query: 190 HGSDGYTGSCDLWSIGVVSYELLTGSTPFN 219
HG+ Y CD+WS GV+ Y LL+G PFN
Sbjct: 201 HGT--YDEKCDVWSTGVILYILLSGCPPFN 228
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 110/216 (50%), Gaps = 18/216 (8%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKM-PNTIER-----DIMVKSKCP 68
++ + + I +GNF + L + +K + + ++ P ++++ IM P
Sbjct: 15 GNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHP 74
Query: 69 YIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHG 128
IV LF + +Y IMEY +GG+ L HG + E +AR ++ AVQY H
Sbjct: 75 NIVKLFEVIETEKTLYLIMEYASGGEVFDYL--VAHGRMKEKEARSKFRQIVSAVQYCHQ 132
Query: 129 LGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEG 188
VHRD+K +N+LL A ++K+ DFG + + G++ + G P Y APE+ +
Sbjct: 133 KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAF--CGAPPYAAPELFQ---- 186
Query: 189 NHGSDGYTGS-CDLWSIGVVSYELLTGSTPFNYETL 223
Y G D+WS+GV+ Y L++GS PF+ + L
Sbjct: 187 ---GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL 219
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 135/272 (49%), Gaps = 32/272 (11%)
Query: 17 FDIKRFIQQGNFGDIYLVEEKQSHNTF---VMKKVLREKMPNTIERDIMVKSKCPYIVNL 73
F+++ + +G +Y ++K + + V+KK + +K+ T E ++++ P I+ L
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRT-EIGVLLRLSHPNIIKL 113
Query: 74 FYSFQDMNHVYFIMEYVTGGD-FVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYV 132
F+ + ++E VTGG+ F ++E GY SE A + ++ +AV YLH G V
Sbjct: 114 KEIFETPTEISLVLELVTGGELFDRIVEK---GYYSERDAADAVKQILEAVAYLHENGIV 170
Query: 133 HRDIKPDNMLLSAT---GHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGN 189
HRD+KP+N+L + LK+ DFG + V+ +K++ GTP Y APE+L
Sbjct: 171 HRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTV--CGTPGYCAPEILR----- 223
Query: 190 HGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLD-MTYSSILACDTEDTVSFPSSIRLS 248
Y D+WS+G+++Y LL G PF E D + IL C+ + + L+
Sbjct: 224 --GCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLN 281
Query: 249 TAMVNFVQSLVQKLDA-----RLNMDQVLGHP 275
+ LV+KL RL Q L HP
Sbjct: 282 A------KDLVRKLIVLDPKKRLTTFQALQHP 307
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 113/210 (53%), Gaps = 22/210 (10%)
Query: 20 KRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMVKS-------KCPYIVN 72
+R + +G+FG++ L ++K + +K + + ++ +++ +++ P I+
Sbjct: 54 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMK 113
Query: 73 LFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYV 132
L+ F+D + Y + E TGG+ + ++ SE A I ++ + Y+H V
Sbjct: 114 LYEFFEDKGYFYLVGEVYTGGELFDEIISRKR--FSEVDAARIIRQVLSGITYMHKNKIV 171
Query: 133 HRDIKPDNMLL---SATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGN 189
HRD+KP+N+LL S ++++ DFG +T + + ++K +GT Y+APEVL
Sbjct: 172 HRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKD--KIGTAYYIAPEVL------ 223
Query: 190 HGSDGYTGSCDLWSIGVVSYELLTGSTPFN 219
HG+ Y CD+WS GV+ Y LL+G PFN
Sbjct: 224 HGT--YDEKCDVWSTGVILYILLSGCPPFN 251
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 107/208 (51%), Gaps = 17/208 (8%)
Query: 17 FDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLR-EKMPNTIERDIMVKS--KCPYIVNL 73
+++ + I GNFG L+ +KQS+ +K + R EK+ ++R+I+ + P IV
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSLRHPNIVRF 80
Query: 74 FYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVH 133
H+ +MEY +GG+ + N G SE +ARF+ +L V Y H + H
Sbjct: 81 KEVILTPTHLAIVMEYASGGELFERICNA--GRFSEDEARFFFQQLISGVSYCHAMQVCH 138
Query: 134 RDIKPDNMLL--SATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHG 191
RD+K +N LL S LK+ DFG + + + KS VGTP Y+APEVL E
Sbjct: 139 RDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLLKKE---- 192
Query: 192 SDGYTGS-CDLWSIGVVSYELLTGSTPF 218
Y G D+WS GV Y +L G+ PF
Sbjct: 193 ---YDGKVADVWSCGVTLYVMLVGAYPF 217
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 113/210 (53%), Gaps = 22/210 (10%)
Query: 20 KRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMVKS-------KCPYIVN 72
+R + +G+FG++ L ++K + +K + + ++ +++ +++ P I+
Sbjct: 55 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMK 114
Query: 73 LFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYV 132
L+ F+D + Y + E TGG+ + ++ SE A I ++ + Y+H V
Sbjct: 115 LYEFFEDKGYFYLVGEVYTGGELFDEIISRKR--FSEVDAARIIRQVLSGITYMHKNKIV 172
Query: 133 HRDIKPDNMLL---SATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGN 189
HRD+KP+N+LL S ++++ DFG +T + + ++K +GT Y+APEVL
Sbjct: 173 HRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKD--KIGTAYYIAPEVL------ 224
Query: 190 HGSDGYTGSCDLWSIGVVSYELLTGSTPFN 219
HG+ Y CD+WS GV+ Y LL+G PFN
Sbjct: 225 HGT--YDEKCDVWSTGVILYILLSGCPPFN 252
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 133/258 (51%), Gaps = 22/258 (8%)
Query: 57 IERDIMVKSKCPY--IVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARF 114
IER++ + + + ++ L +++ V I+E V+GG+ L + LSE +A
Sbjct: 62 IEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATS 119
Query: 115 YIYELAQAVQYLHGLGYVHRDIKPDNMLL----SATGHLKLTDFGSATQVDKNGRIKSIV 170
+I ++ V YLH H D+KP+N++L H+KL DFG A +++ K+I
Sbjct: 120 FIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF 179
Query: 171 PVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSI 230
GTPE+VAPE++ N+ G D+WSIGV++Y LL+G++PF +T T ++I
Sbjct: 180 --GTPEFVAPEIV-----NYEPLGL--EADMWSIGVITYILLSGASPFLGDTKQETLANI 230
Query: 231 LACDTEDTVSFPSSIRLSTAMVNFVQS-LVQKLDARLNMDQVLGHPVFDCLDSDPPCIPP 289
A + F S + S +F++ LV++ RL + + L HP +D+ +
Sbjct: 231 TAVSYDFDEEFFS--QTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRR 288
Query: 290 PSQEN--KFHKKDKRKAS 305
S N F K+ R+ S
Sbjct: 289 ESVVNLENFRKQYVRRRS 306
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 107/208 (51%), Gaps = 17/208 (8%)
Query: 17 FDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLR-EKMPNTIERDIMVKS--KCPYIVNL 73
+++ + I GNFG L+ +KQS+ +K + R EK+ ++R+I+ + P IV
Sbjct: 20 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRF 79
Query: 74 FYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVH 133
H+ +MEY +GG+ + N G SE +ARF+ +L V Y H + H
Sbjct: 80 KEVILTPTHLAIVMEYASGGELFERICNA--GRFSEDEARFFFQQLISGVSYCHAMQVCH 137
Query: 134 RDIKPDNMLL--SATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHG 191
RD+K +N LL S LK+ DFG + + + KS VGTP Y+APEVL E
Sbjct: 138 RDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLLKKE---- 191
Query: 192 SDGYTGS-CDLWSIGVVSYELLTGSTPF 218
Y G D+WS GV Y +L G+ PF
Sbjct: 192 ---YDGKVADVWSCGVTLYVMLVGAYPF 216
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 114/221 (51%), Gaps = 23/221 (10%)
Query: 9 QKNVSASDFDI-KRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMVK--- 64
+KN D+ + + + G G + + K++ F +K + + P R++ +
Sbjct: 55 KKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKXL--QDCPKA-RREVELHWRA 111
Query: 65 SKCPYIVNLFYSFQDM----NHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELA 120
S+CP+IV + ++++ + + E + GG+ + ++++ +E +A +
Sbjct: 112 SQCPHIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIG 171
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSA---TGHLKLTDFGSATQVDKNGRIKSIVPVGTPEY 177
+A+QYLH + HRD+KP+N+L ++ LKLTDFG A + + + + P TP Y
Sbjct: 172 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT--PCYTPYY 229
Query: 178 VAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
VAPEVL G + Y SCD WS+GV+ Y LL G PF
Sbjct: 230 VAPEVL-------GPEKYDKSCDXWSLGVIXYILLCGYPPF 263
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 124/233 (53%), Gaps = 20/233 (8%)
Query: 57 IERDIMVKSKCPY--IVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARF 114
IER++ + + + ++ L +++ V I+E V+GG+ L + LSE +A
Sbjct: 62 IEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATS 119
Query: 115 YIYELAQAVQYLHGLGYVHRDIKPDNMLL----SATGHLKLTDFGSATQVDKNGRIKSIV 170
+I ++ V YLH H D+KP+N++L H+KL DFG A +++ K+I
Sbjct: 120 FIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF 179
Query: 171 PVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSI 230
GTPE+VAPE++ N+ G D+WSIGV++Y LL+G++PF +T T ++I
Sbjct: 180 --GTPEFVAPEIV-----NYEPLGL--EADMWSIGVITYILLSGASPFLGDTKQETLANI 230
Query: 231 LACDTEDTVSFPSSIRLSTAMVNFVQS-LVQKLDARLNMDQVLGHPVFDCLDS 282
A + F S + S +F++ LV++ RL + + L HP +D+
Sbjct: 231 TAVSYDFDEEFFS--QTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDN 281
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 107/200 (53%), Gaps = 16/200 (8%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKV---LREKMPNTIERDIMVKSKC--PYIVNLFYSF 77
I +G+FG+++ + ++ +K + E I+++I V S+C PY+ + S+
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 74
Query: 78 QDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIK 137
++ IMEY+ GG + LLE P L E++ + E+ + + YLH +HRDIK
Sbjct: 75 LKDTKLWIIMEYLGGGSALDLLEPGP---LDETQIATILREILKGLDYLHSEKKIHRDIK 131
Query: 138 PDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTG 197
N+LLS G +KL DFG A Q+ + +IK VGTP ++APEV++ Y
Sbjct: 132 AANVLLSEHGEVKLADFGVAGQLT-DTQIKRNTFVGTPFWMAPEVIK-------QSAYDS 183
Query: 198 SCDLWSIGVVSYELLTGSTP 217
D+WS+G+ + EL G P
Sbjct: 184 KADIWSLGITAIELARGEPP 203
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 107/200 (53%), Gaps = 16/200 (8%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKV---LREKMPNTIERDIMVKSKC--PYIVNLFYSF 77
I +G+FG+++ + ++ +K + E I+++I V S+C PY+ + S+
Sbjct: 30 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 89
Query: 78 QDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIK 137
++ IMEY+ GG + LLE P L E++ + E+ + + YLH +HRDIK
Sbjct: 90 LKDTKLWIIMEYLGGGSALDLLEPGP---LDETQIATILREILKGLDYLHSEKKIHRDIK 146
Query: 138 PDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTG 197
N+LLS G +KL DFG A Q+ + +IK VGTP ++APEV++ Y
Sbjct: 147 AANVLLSEHGEVKLADFGVAGQL-TDTQIKRNXFVGTPFWMAPEVIK-------QSAYDS 198
Query: 198 SCDLWSIGVVSYELLTGSTP 217
D+WS+G+ + EL G P
Sbjct: 199 KADIWSLGITAIELARGEPP 218
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 107/208 (51%), Gaps = 17/208 (8%)
Query: 17 FDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLR-EKMPNTIERDIMVKS--KCPYIVNL 73
+++ + I GNFG L+ +KQ++ +K + R EK+ ++R+I+ + P IV
Sbjct: 21 YELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRF 80
Query: 74 FYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVH 133
H+ +MEY +GG+ + N G SE +ARF+ +L V Y H + H
Sbjct: 81 KEVILTPTHLAIVMEYASGGELFERICNA--GRFSEDEARFFFQQLISGVSYAHAMQVAH 138
Query: 134 RDIKPDNMLL--SATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHG 191
RD+K +N LL S LK+ DFG + + + KS VGTP Y+APEVL E
Sbjct: 139 RDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSA--VGTPAYIAPEVLLKKE---- 192
Query: 192 SDGYTGS-CDLWSIGVVSYELLTGSTPF 218
Y G D+WS GV Y +L G+ PF
Sbjct: 193 ---YDGKVADVWSCGVTLYVMLVGAYPF 217
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 107/200 (53%), Gaps = 16/200 (8%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKV---LREKMPNTIERDIMVKSKC--PYIVNLFYSF 77
I +G+FG+++ + ++ +K + E I+++I V S+C PY+ + S+
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 74
Query: 78 QDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIK 137
++ IMEY+ GG + LLE P L E++ + E+ + + YLH +HRDIK
Sbjct: 75 LKDTKLWIIMEYLGGGSALDLLEPGP---LDETQIATILREILKGLDYLHSEKKIHRDIK 131
Query: 138 PDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTG 197
N+LLS G +KL DFG A Q+ + +IK VGTP ++APEV++ Y
Sbjct: 132 AANVLLSEHGEVKLADFGVAGQLT-DTQIKRNXFVGTPFWMAPEVIK-------QSAYDS 183
Query: 198 SCDLWSIGVVSYELLTGSTP 217
D+WS+G+ + EL G P
Sbjct: 184 KADIWSLGITAIELARGEPP 203
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 111/218 (50%), Gaps = 20/218 (9%)
Query: 17 FDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVL--REKMP-NTIERDIMVKSKC--PYIV 71
F KR + G FGD++LVEE+ S V+K + R ++P IE +I V P I+
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNII 83
Query: 72 NLFYSFQDMNHVYFIMEYVTGGDFV-TLLENQPHG-YLSESKARFYIYELAQAVQYLHGL 129
+F F+D +++Y +ME GG+ + ++ Q G LSE + ++ A+ Y H
Sbjct: 84 KIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ 143
Query: 130 GYVHRDIKPDNMLLSATGH---LKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWM 186
VH+D+KP+N+L T +K+ DFG A + S GT Y+APEV +
Sbjct: 144 HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH--STNAAGTALYMAPEVFK-- 199
Query: 187 EGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLD 224
T CD+WS GVV Y LLTG PF +L+
Sbjct: 200 ------RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLE 231
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 117/220 (53%), Gaps = 26/220 (11%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERD------------IMV 63
++ + + + G G++ L E+++ +K + + K R+ I+
Sbjct: 10 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 69
Query: 64 KSKCPYIVNLFYSFQDMNHVYFIMEYVTGGD-FVTLLENQPHGYLSESKARFYIYELAQA 122
K P I+ + +F D Y ++E + GG+ F ++ N+ L E+ + Y Y++ A
Sbjct: 70 KLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVGNK---RLKEATCKLYFYQMLLA 125
Query: 123 VQYLHGLGYVHRDIKPDNMLLSAT---GHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVA 179
VQYLH G +HRD+KP+N+LLS+ +K+TDFG + + + ++++ GTP Y+A
Sbjct: 126 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL--CGTPTYLA 183
Query: 180 PEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFN 219
PEVL + G+ GY + D WS+GV+ + L+G PF+
Sbjct: 184 PEVLV----SVGTAGYNRAVDCWSLGVILFICLSGYPPFS 219
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 117/220 (53%), Gaps = 26/220 (11%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERD------------IMV 63
++ + + + G G++ L E+++ +K + + K R+ I+
Sbjct: 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 70
Query: 64 KSKCPYIVNLFYSFQDMNHVYFIMEYVTGGD-FVTLLENQPHGYLSESKARFYIYELAQA 122
K P I+ + +F D Y ++E + GG+ F ++ N+ L E+ + Y Y++ A
Sbjct: 71 KLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVGNK---RLKEATCKLYFYQMLLA 126
Query: 123 VQYLHGLGYVHRDIKPDNMLLSAT---GHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVA 179
VQYLH G +HRD+KP+N+LLS+ +K+TDFG + + + ++++ GTP Y+A
Sbjct: 127 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL--CGTPTYLA 184
Query: 180 PEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFN 219
PEVL + G+ GY + D WS+GV+ + L+G PF+
Sbjct: 185 PEVLV----SVGTAGYNRAVDCWSLGVILFICLSGYPPFS 220
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 117/220 (53%), Gaps = 26/220 (11%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERD------------IMV 63
++ + + + G G++ L E+++ +K + + K R+ I+
Sbjct: 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 70
Query: 64 KSKCPYIVNLFYSFQDMNHVYFIMEYVTGGD-FVTLLENQPHGYLSESKARFYIYELAQA 122
K P I+ + +F D Y ++E + GG+ F ++ N+ L E+ + Y Y++ A
Sbjct: 71 KLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVGNK---RLKEATCKLYFYQMLLA 126
Query: 123 VQYLHGLGYVHRDIKPDNMLLSAT---GHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVA 179
VQYLH G +HRD+KP+N+LLS+ +K+TDFG + + + ++++ GTP Y+A
Sbjct: 127 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL--CGTPTYLA 184
Query: 180 PEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFN 219
PEVL + G+ GY + D WS+GV+ + L+G PF+
Sbjct: 185 PEVLV----SVGTAGYNRAVDCWSLGVILFICLSGYPPFS 220
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 110/217 (50%), Gaps = 17/217 (7%)
Query: 21 RFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKM--PNTIER---DIMVKSKC--PYIVNL 73
RF+ +G F Y + + + F K V + + P+ E+ +I + P++V
Sbjct: 48 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF 107
Query: 74 FYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVH 133
F+D + VY ++E + L + + ++E +AR+++ + Q VQYLH +H
Sbjct: 108 HGFFEDDDFVYVVLEICRRRSLLELHKRR--KAVTEPEARYFMRQTIQGVQYLHNNRVIH 165
Query: 134 RDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSD 193
RD+K N+ L+ +K+ DFG AT+++ +G K + GTP Y+APEVL
Sbjct: 166 RDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTL-CGTPNYIAPEVL-------CKK 217
Query: 194 GYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSI 230
G++ D+WS+G + Y LL G PF L TY I
Sbjct: 218 GHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRI 254
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 110/217 (50%), Gaps = 17/217 (7%)
Query: 21 RFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKM--PNTIER---DIMVKSKC--PYIVNL 73
RF+ +G F Y + + + F K V + + P+ E+ +I + P++V
Sbjct: 48 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF 107
Query: 74 FYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVH 133
F+D + VY ++E + L + + ++E +AR+++ + Q VQYLH +H
Sbjct: 108 HGFFEDDDFVYVVLEICRRRSLLELHKRR--KAVTEPEARYFMRQTIQGVQYLHNNRVIH 165
Query: 134 RDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSD 193
RD+K N+ L+ +K+ DFG AT+++ +G K + GTP Y+APEVL
Sbjct: 166 RDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXL-CGTPNYIAPEVL-------CKK 217
Query: 194 GYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSI 230
G++ D+WS+G + Y LL G PF L TY I
Sbjct: 218 GHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRI 254
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 117/220 (53%), Gaps = 26/220 (11%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERD------------IMV 63
++ + + + G G++ L E+++ +K + + K R+ I+
Sbjct: 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 70
Query: 64 KSKCPYIVNLFYSFQDMNHVYFIMEYVTGGD-FVTLLENQPHGYLSESKARFYIYELAQA 122
K P I+ + +F D Y ++E + GG+ F ++ N+ L E+ + Y Y++ A
Sbjct: 71 KLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVGNK---RLKEATCKLYFYQMLLA 126
Query: 123 VQYLHGLGYVHRDIKPDNMLLSAT---GHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVA 179
VQYLH G +HRD+KP+N+LLS+ +K+TDFG + + + ++++ GTP Y+A
Sbjct: 127 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL--CGTPTYLA 184
Query: 180 PEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFN 219
PEVL + G+ GY + D WS+GV+ + L+G PF+
Sbjct: 185 PEVLV----SVGTAGYNRAVDCWSLGVILFICLSGYPPFS 220
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 107/200 (53%), Gaps = 16/200 (8%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKV---LREKMPNTIERDIMVKSKC--PYIVNLFYSF 77
I +G+FG+++ + ++ +K + E I+++I V S+C PY+ + S+
Sbjct: 35 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 94
Query: 78 QDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIK 137
++ IMEY+ GG + LLE P L E++ + E+ + + YLH +HRDIK
Sbjct: 95 LKDTKLWIIMEYLGGGSALDLLEPGP---LDETQIATILREILKGLDYLHSEKKIHRDIK 151
Query: 138 PDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTG 197
N+LLS G +KL DFG A Q+ + +IK VGTP ++APEV++ Y
Sbjct: 152 AANVLLSEHGEVKLADFGVAGQL-TDTQIKRNTFVGTPFWMAPEVIK-------QSAYDS 203
Query: 198 SCDLWSIGVVSYELLTGSTP 217
D+WS+G+ + EL G P
Sbjct: 204 KADIWSLGITAIELARGEPP 223
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 126/265 (47%), Gaps = 36/265 (13%)
Query: 22 FIQQGNFGDIYLVEEKQSHNTFVMKKVL---------REKMPNTIERDIMVKSKCPYIVN 72
F+ +G F + + + + F K V REKM ++E I ++V
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKM--SMEISIHRSLAHQHVVG 103
Query: 73 LFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYV 132
F+D + V+ ++E + L + + L+E +AR+Y+ ++ QYLH +
Sbjct: 104 FHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVI 161
Query: 133 HRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGS 192
HRD+K N+ L+ +K+ DFG AT+V+ +G K ++ GTP Y+APEVL
Sbjct: 162 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVL-CGTPNYIAPEVLS-------K 213
Query: 193 DGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRLSTAMV 252
G++ D+WSIG + Y LL G PF L TY I ++ S P I A
Sbjct: 214 KGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRI----KKNEYSIPKHINPVAA-- 267
Query: 253 NFVQSLVQKL-----DARLNMDQVL 272
SL+QK+ AR ++++L
Sbjct: 268 ----SLIQKMLQTDPTARPTINELL 288
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 126/265 (47%), Gaps = 36/265 (13%)
Query: 22 FIQQGNFGDIYLVEEKQSHNTFVMKKVL---------REKMPNTIERDIMVKSKCPYIVN 72
F+ +G F + + + + F K V REKM ++E I ++V
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKM--SMEISIHRSLAHQHVVG 105
Query: 73 LFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYV 132
F+D + V+ ++E + L + + L+E +AR+Y+ ++ QYLH +
Sbjct: 106 FHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVI 163
Query: 133 HRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGS 192
HRD+K N+ L+ +K+ DFG AT+V+ +G K ++ GTP Y+APEVL
Sbjct: 164 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVL-CGTPNYIAPEVLS-------K 215
Query: 193 DGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRLSTAMV 252
G++ D+WSIG + Y LL G PF L TY I ++ S P I A
Sbjct: 216 KGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRI----KKNEYSIPKHINPVAA-- 269
Query: 253 NFVQSLVQKL-----DARLNMDQVL 272
SL+QK+ AR ++++L
Sbjct: 270 ----SLIQKMLQTDPTARPTINELL 290
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 132/258 (51%), Gaps = 22/258 (8%)
Query: 57 IERDIMVKSKCPY--IVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARF 114
IER++ + + + ++ L +++ V I+E V+GG+ L + LSE +A
Sbjct: 62 IEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATS 119
Query: 115 YIYELAQAVQYLHGLGYVHRDIKPDNMLL----SATGHLKLTDFGSATQVDKNGRIKSIV 170
+I ++ V YLH H D+KP+N++L H+KL DFG A +++ K+I
Sbjct: 120 FIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF 179
Query: 171 PVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSI 230
GTPE+VAPE++ N+ G D+WSIGV++Y LL+G++PF +T T ++I
Sbjct: 180 --GTPEFVAPEIV-----NYEPLGL--EADMWSIGVITYILLSGASPFLGDTKQETLANI 230
Query: 231 LACDTE-DTVSFPSSIRLSTAMVNFVQSLVQKLDARLNMDQVLGHPVFDCLDSDPPCIPP 289
+ + D F + L+ + + LV++ RL + + L HP +D+ +
Sbjct: 231 TSVSYDFDEEFFSHTSELAKDFIR--KLLVKETRKRLTIQEALRHPWITPVDNQQAMVRR 288
Query: 290 PSQEN--KFHKKDKRKAS 305
S N F K+ R+ S
Sbjct: 289 ESVVNLENFRKQYVRRRS 306
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 105/200 (52%), Gaps = 16/200 (8%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKV---LREKMPNTIERDIMVKSKC--PYIVNLFYSF 77
I +G+FG++Y + + +K + E I+++I V S+C PYI F S+
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSY 86
Query: 78 QDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIK 137
++ IMEY+ GG + LL+ P L E+ + E+ + + YLH +HRDIK
Sbjct: 87 LKSTKLWIIMEYLGGGSALDLLKPGP---LEETYIATILREILKGLDYLHSERKIHRDIK 143
Query: 138 PDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTG 197
N+LLS G +KL DFG A Q+ + +IK VGTP ++APEV++ Y
Sbjct: 144 AANVLLSEQGDVKLADFGVAGQL-TDTQIKRNXFVGTPFWMAPEVIK-------QSAYDF 195
Query: 198 SCDLWSIGVVSYELLTGSTP 217
D+WS+G+ + EL G P
Sbjct: 196 KADIWSLGITAIELAKGEPP 215
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 113/210 (53%), Gaps = 22/210 (10%)
Query: 20 KRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMVKS-------KCPYIVN 72
+R + +G+FG++ L ++K + +K + + ++ +++ +++ P I+
Sbjct: 37 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMK 96
Query: 73 LFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYV 132
L+ F+D + Y + E TGG+ + ++ SE A I ++ + Y+H V
Sbjct: 97 LYEFFEDKGYFYLVGEVYTGGELFDEIISRKR--FSEVDAARIIRQVLSGITYMHKNKIV 154
Query: 133 HRDIKPDNMLL---SATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGN 189
HRD+KP+N+LL S ++++ DFG +T + + ++K +GT Y+APEVL
Sbjct: 155 HRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKD--KIGTAYYIAPEVL------ 206
Query: 190 HGSDGYTGSCDLWSIGVVSYELLTGSTPFN 219
HG+ Y CD+WS GV+ Y LL+G PFN
Sbjct: 207 HGT--YDEKCDVWSTGVILYILLSGCPPFN 234
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 117/220 (53%), Gaps = 26/220 (11%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERD------------IMV 63
++ + + + G G++ L E+++ +K + + K R+ I+
Sbjct: 17 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 76
Query: 64 KSKCPYIVNLFYSFQDMNHVYFIMEYVTGGD-FVTLLENQPHGYLSESKARFYIYELAQA 122
K P I+ + +F D Y ++E + GG+ F ++ N+ L E+ + Y Y++ A
Sbjct: 77 KLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVGNK---RLKEATCKLYFYQMLLA 132
Query: 123 VQYLHGLGYVHRDIKPDNMLLSAT---GHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVA 179
VQYLH G +HRD+KP+N+LLS+ +K+TDFG + + + ++++ GTP Y+A
Sbjct: 133 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL--CGTPTYLA 190
Query: 180 PEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFN 219
PEVL + G+ GY + D WS+GV+ + L+G PF+
Sbjct: 191 PEVLV----SVGTAGYNRAVDCWSLGVILFICLSGYPPFS 226
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 110/210 (52%), Gaps = 22/210 (10%)
Query: 20 KRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMVKS-------KCPYIVN 72
+R + +G+FG++ L ++K + +K + + ++ +++ +++ P I
Sbjct: 31 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXK 90
Query: 73 LFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYV 132
L+ F+D + Y + E TGG+ + ++ SE A I ++ + Y H V
Sbjct: 91 LYEFFEDKGYFYLVGEVYTGGELFDEIISRKR--FSEVDAARIIRQVLSGITYXHKNKIV 148
Query: 133 HRDIKPDNMLL---SATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGN 189
HRD+KP+N+LL S ++++ DFG +T + + + K +GT Y+APEVL
Sbjct: 149 HRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKD--KIGTAYYIAPEVL------ 200
Query: 190 HGSDGYTGSCDLWSIGVVSYELLTGSTPFN 219
HG+ Y CD+WS GV+ Y LL+G PFN
Sbjct: 201 HGT--YDEKCDVWSTGVILYILLSGCPPFN 228
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 123/233 (52%), Gaps = 20/233 (8%)
Query: 57 IERDIMVKSKCPY--IVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARF 114
IER++ + + + ++ L +++ V I+E V+GG+ L + LSE +A
Sbjct: 62 IEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATS 119
Query: 115 YIYELAQAVQYLHGLGYVHRDIKPDNMLL----SATGHLKLTDFGSATQVDKNGRIKSIV 170
+I ++ V YLH H D+KP+N++L H+KL DFG A +++ K+I
Sbjct: 120 FIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF 179
Query: 171 PVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSI 230
GTPE+VAPE++ N+ G D+WSIGV++Y LL+G++PF +T T ++I
Sbjct: 180 --GTPEFVAPEIV-----NYEPLGL--EADMWSIGVITYILLSGASPFLGDTKQETLANI 230
Query: 231 LACDTE-DTVSFPSSIRLSTAMVNFVQSLVQKLDARLNMDQVLGHPVFDCLDS 282
+ + D F + L+ + + LV++ RL + + L HP +D+
Sbjct: 231 TSVSYDFDEEFFSHTSELAKDFIR--KLLVKETRKRLTIQEALRHPWITPVDN 281
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 110/217 (50%), Gaps = 17/217 (7%)
Query: 21 RFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKM--PNTIER---DIMVKSKC--PYIVNL 73
RF+ +G F Y + + + F K V + + P+ E+ +I + P++V
Sbjct: 48 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF 107
Query: 74 FYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVH 133
F+D + VY ++E + L + + ++E +AR+++ + Q VQYLH +H
Sbjct: 108 HGFFEDDDFVYVVLEICRRRSLLELHKRR--KAVTEPEARYFMRQTIQGVQYLHNNRVIH 165
Query: 134 RDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSD 193
RD+K N+ L+ +K+ DFG AT+++ +G K + GTP Y+APEVL
Sbjct: 166 RDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDL-CGTPNYIAPEVL-------CKK 217
Query: 194 GYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSI 230
G++ D+WS+G + Y LL G PF L TY I
Sbjct: 218 GHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRI 254
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 126/265 (47%), Gaps = 36/265 (13%)
Query: 22 FIQQGNFGDIYLVEEKQSHNTFVMKKVL---------REKMPNTIERDIMVKSKCPYIVN 72
F+ +G F + + + + F K V REKM ++E I ++V
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKM--SMEISIHRSLAHQHVVG 79
Query: 73 LFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYV 132
F+D + V+ ++E + L + + L+E +AR+Y+ ++ QYLH +
Sbjct: 80 FHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVI 137
Query: 133 HRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGS 192
HRD+K N+ L+ +K+ DFG AT+V+ +G K ++ GTP Y+APEVL
Sbjct: 138 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVL-CGTPNYIAPEVLS-------K 189
Query: 193 DGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRLSTAMV 252
G++ D+WSIG + Y LL G PF L TY I ++ S P I A
Sbjct: 190 KGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRI----KKNEYSIPKHINPVAA-- 243
Query: 253 NFVQSLVQKL-----DARLNMDQVL 272
SL+QK+ AR ++++L
Sbjct: 244 ----SLIQKMLQTDPTARPTINELL 264
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 123/233 (52%), Gaps = 20/233 (8%)
Query: 57 IERDIMVKSKCPY--IVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARF 114
IER++ + + + ++ L +++ V I+E V+GG+ L + LSE +A
Sbjct: 62 IEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATS 119
Query: 115 YIYELAQAVQYLHGLGYVHRDIKPDNMLL----SATGHLKLTDFGSATQVDKNGRIKSIV 170
+I ++ V YLH H D+KP+N++L H+KL DFG A +++ K+I
Sbjct: 120 FIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF 179
Query: 171 PVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSI 230
GTPE+VAPE++ N+ G D+WSIGV++Y LL+G++PF +T T ++I
Sbjct: 180 --GTPEFVAPEIV-----NYEPLGL--EADMWSIGVITYILLSGASPFLGDTKQETLANI 230
Query: 231 LACDTE-DTVSFPSSIRLSTAMVNFVQSLVQKLDARLNMDQVLGHPVFDCLDS 282
+ + D F + L+ + + LV++ RL + + L HP +D+
Sbjct: 231 TSVSYDFDEEFFSHTSELAKDFIR--KLLVKETRKRLTIQEALRHPWITPVDN 281
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 115/223 (51%), Gaps = 11/223 (4%)
Query: 58 ERDIMVK-SKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYI 116
E DI+ K S P I+ L +++ + + + + G+ L + LSE + R +
Sbjct: 73 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT--LSEKETRKIM 130
Query: 117 YELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPE 176
L + + LH L VHRD+KP+N+LL ++KLTDFG + Q+D +++S+ GTP
Sbjct: 131 RALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSV--CGTPS 188
Query: 177 YVAPEVLEW-MEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDT 235
Y+APE++E M NH GY D+WS GV+ Y LL GS PF + + I++ +
Sbjct: 189 YLAPEIIECSMNDNH--PGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNY 246
Query: 236 EDTVSFPSSIRLSTAMVNFV-QSLVQKLDARLNMDQVLGHPVF 277
+ P S + + V + LV + R ++ L HP F
Sbjct: 247 Q--FGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFF 287
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 110/217 (50%), Gaps = 17/217 (7%)
Query: 21 RFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKM--PNTIER---DIMVKSKC--PYIVNL 73
RF+ +G F Y + + + F K V + + P+ E+ +I + P++V
Sbjct: 32 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF 91
Query: 74 FYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVH 133
F+D + VY ++E + L + + ++E +AR+++ + Q VQYLH +H
Sbjct: 92 HGFFEDDDFVYVVLEICRRRSLLELHKRR--KAVTEPEARYFMRQTIQGVQYLHNNRVIH 149
Query: 134 RDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSD 193
RD+K N+ L+ +K+ DFG AT+++ +G K + GTP Y+APEVL
Sbjct: 150 RDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDL-CGTPNYIAPEVL-------CKK 201
Query: 194 GYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSI 230
G++ D+WS+G + Y LL G PF L TY I
Sbjct: 202 GHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRI 238
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 122/268 (45%), Gaps = 18/268 (6%)
Query: 17 FDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLR-EKMPNTIERDIMVKS--KCPYIVNL 73
+D + I GNFG L+ +K + +K + R + ++R+I+ + P IV
Sbjct: 22 YDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRF 81
Query: 74 FYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVH 133
H+ IMEY +GG+ + N G SE +ARF+ +L V Y H + H
Sbjct: 82 KEVILTPTHLAIIMEYASGGELYERICNA--GRFSEDEARFFFQQLLSGVSYCHSMQICH 139
Query: 134 RDIKPDNMLL--SATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHG 191
RD+K +N LL S LK+ DFG + + + KS VGTP Y+APEVL E
Sbjct: 140 RDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLLRQE---- 193
Query: 192 SDGYTGS-CDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRLSTA 250
Y G D+WS GV Y +L G+ PF Y + S P IR+S
Sbjct: 194 ---YDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPE 250
Query: 251 MVNFVQSL-VQKLDARLNMDQVLGHPVF 277
+ + + V R+++ ++ H F
Sbjct: 251 CCHLISRIFVADPATRISIPEIKTHSWF 278
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 106/208 (50%), Gaps = 17/208 (8%)
Query: 17 FDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLR-EKMPNTIERDIMVKS--KCPYIVNL 73
+++ + I GNFG L+ +KQS+ +K + R EK+ ++R+I+ + P IV
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRF 80
Query: 74 FYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVH 133
H+ +MEY +GG+ + N G SE +ARF+ +L V Y H + H
Sbjct: 81 KEVILTPTHLAIVMEYASGGELFERICNA--GRFSEDEARFFFQQLISGVSYCHAMQVCH 138
Query: 134 RDIKPDNMLL--SATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHG 191
RD+K +N LL S LK+ FG + + + KS VGTP Y+APEVL E
Sbjct: 139 RDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKST--VGTPAYIAPEVLLKKE---- 192
Query: 192 SDGYTGS-CDLWSIGVVSYELLTGSTPF 218
Y G D+WS GV Y +L G+ PF
Sbjct: 193 ---YDGKVADVWSCGVTLYVMLVGAYPF 217
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 140/284 (49%), Gaps = 29/284 (10%)
Query: 7 LRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNT--------IE 58
RQ+NV +D + G F + EK + + K + + + ++ IE
Sbjct: 4 FRQENVD-DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE 62
Query: 59 RDIMVKSKC--PYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYI 116
R++ + + P ++ L +++ V I+E V GG+ L + L+E +A ++
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFL 120
Query: 117 YELAQAVQYLHGLGYVHRDIKPDNMLL----SATGHLKLTDFGSATQVDKNGRIKSIVPV 172
++ V YLH L H D+KP+N++L +K+ DFG A ++D K+I
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-- 178
Query: 173 GTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILA 232
GTPE+VAPE++ N+ G D+WSIGV++Y LL+G++PF +T T +++ A
Sbjct: 179 GTPEFVAPEIV-----NYEPLGL--EADMWSIGVITYILLSGASPFLGDTKQETLANVSA 231
Query: 233 CDTEDTVSFPSSIRLSTAMVNFVQS-LVQKLDARLNMDQVLGHP 275
+ E + S+ S +F++ LV+ R+ + L HP
Sbjct: 232 VNYEFEDEYFSNT--SALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/269 (31%), Positives = 130/269 (48%), Gaps = 32/269 (11%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNT----IERDIMVKSKCPYIVNLFYSFQ 78
I +G++G++ + +K + KK+ + + + E +IM P I+ L+ +F+
Sbjct: 34 IGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFE 93
Query: 79 DMNHVYFIMEYVTGGDFVTLLENQPHG-YLSESKARFYIYELAQAVQYLHGLGYVHRDIK 137
D +Y +ME TGG+ L E H ES A + ++ AV Y H L HRD+K
Sbjct: 94 DNTDIYLVMELCTGGE---LFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLK 150
Query: 138 PDNMLL---SATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDG 194
P+N L S LKL DFG A + +++ VGTP YV+P+VL EG +G +
Sbjct: 151 PENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRT--KVGTPYYVSPQVL---EGLYGPE- 204
Query: 195 YTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRLSTAMVNF 254
CD WS GV+ Y LL G PF+ T ++ E T +FP L+ +
Sbjct: 205 ----CDEWSAGVMMYVLLCGYPPFSAP----TDXEVMLKIREGTFTFPEKDWLNVSPQ-- 254
Query: 255 VQSLVQKL-----DARLNMDQVLGHPVFD 278
+SL+++L R+ Q L H F+
Sbjct: 255 AESLIRRLLTKSPKQRITSLQALEHEWFE 283
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 89/161 (55%), Gaps = 17/161 (10%)
Query: 65 SKCPYIVNLFYSFQDMNH----VYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELA 120
S P+IV + +++M+H + IME + GG+ + ++ + +E +A + ++
Sbjct: 60 SGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIG 119
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSAT---GHLKLTDFGSATQVDKNGRIKSIVPVGTPEY 177
A+Q+LH HRD+KP+N+L ++ LKLTDFG A + +N P TP Y
Sbjct: 120 TAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNAL---QTPCYTPYY 176
Query: 178 VAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
VAPEVL G + Y SCD+WS+GV+ Y LL G PF
Sbjct: 177 VAPEVL-------GPEKYDKSCDMWSLGVIMYILLCGFPPF 210
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/269 (31%), Positives = 130/269 (48%), Gaps = 32/269 (11%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNT----IERDIMVKSKCPYIVNLFYSFQ 78
I +G++G++ + +K + KK+ + + + E +IM P I+ L+ +F+
Sbjct: 17 IGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFE 76
Query: 79 DMNHVYFIMEYVTGGDFVTLLENQPHG-YLSESKARFYIYELAQAVQYLHGLGYVHRDIK 137
D +Y +ME TGG+ L E H ES A + ++ AV Y H L HRD+K
Sbjct: 77 DNTDIYLVMELCTGGE---LFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLK 133
Query: 138 PDNMLL---SATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDG 194
P+N L S LKL DFG A + +++ VGTP YV+P+VL EG +G +
Sbjct: 134 PENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRT--KVGTPYYVSPQVL---EGLYGPE- 187
Query: 195 YTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRLSTAMVNF 254
CD WS GV+ Y LL G PF+ T ++ E T +FP L+ +
Sbjct: 188 ----CDEWSAGVMMYVLLCGYPPFSAP----TDXEVMLKIREGTFTFPEKDWLNVSPQ-- 237
Query: 255 VQSLVQKL-----DARLNMDQVLGHPVFD 278
+SL+++L R+ Q L H F+
Sbjct: 238 AESLIRRLLTKSPKQRITSLQALEHEWFE 266
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 110/216 (50%), Gaps = 18/216 (8%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKM-PNTIER-----DIMVKSKCP 68
++ +++ I +GNF + L + +K + + ++ P ++++ IM P
Sbjct: 15 GNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHP 74
Query: 69 YIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHG 128
IV LF + +Y +MEY +GG+ L HG + E +AR ++ AVQY H
Sbjct: 75 NIVKLFEVIETEKTLYLVMEYASGGEVFDYL--VAHGRMKEKEARAKFRQIVSAVQYCHQ 132
Query: 129 LGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEG 188
VHRD+K +N+LL ++K+ DFG + + ++ + G+P Y APE+ +
Sbjct: 133 KYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTF--CGSPPYAAPELFQ---- 186
Query: 189 NHGSDGYTGS-CDLWSIGVVSYELLTGSTPFNYETL 223
Y G D+WS+GV+ Y L++GS PF+ + L
Sbjct: 187 ---GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL 219
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 125/265 (47%), Gaps = 36/265 (13%)
Query: 22 FIQQGNFGDIYLVEEKQSHNTFVMKKVL---------REKMPNTIERDIMVKSKCPYIVN 72
F+ +G F + + + + F K V REKM ++E I ++V
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKM--SMEISIHRSLAHQHVVG 85
Query: 73 LFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYV 132
F+D + V+ ++E + L + + L+E +AR+Y+ ++ QYLH +
Sbjct: 86 FHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVI 143
Query: 133 HRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGS 192
HRD+K N+ L+ +K+ DFG AT+V+ +G K + GTP Y+APEVL
Sbjct: 144 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTL-CGTPNYIAPEVLS-------K 195
Query: 193 DGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRLSTAMV 252
G++ D+WSIG + Y LL G PF L TY I ++ S P I A
Sbjct: 196 KGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRI----KKNEYSIPKHINPVAA-- 249
Query: 253 NFVQSLVQKL-----DARLNMDQVL 272
SL+QK+ AR ++++L
Sbjct: 250 ----SLIQKMLQTDPTARPTINELL 270
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 151/300 (50%), Gaps = 27/300 (9%)
Query: 17 FDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIER-------DIMVKSKCPY 69
+DI + G FG ++ EK + FV K + P +++ IM + P
Sbjct: 53 YDILEELGSGAFGVVHRCVEKATGRVFVAKFI---NTPYPLDKYTVKNEISIMNQLHHPK 109
Query: 70 IVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGL 129
++NL +F+D + I+E+++GG+ + + + +SE++ Y+ + + ++++H
Sbjct: 110 LINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYK-MSEAEVINYMRQACEGLKHMHEH 168
Query: 130 GYVHRDIKPDNMLLSA--TGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWME 187
VH DIKP+N++ +K+ DFG AT+++ + +K V T E+ APE+++
Sbjct: 169 SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVK--VTTATAEFAAPEIVD--- 223
Query: 188 GNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTE-DTVSFPSSIR 246
YT D+W+IGV+ Y LL+G +PF E T ++ CD E D +F S
Sbjct: 224 -REPVGFYT---DMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSS--- 276
Query: 247 LSTAMVNFVQSLVQK-LDARLNMDQVLGHPVFDCLDSDPPCIPPPSQENKFHKKDKRKAS 305
+S +F+++L+QK RL + L HP S+ P S+ NK +K K K +
Sbjct: 277 VSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHSNLTSRIPSSRYNKIRQKIKEKYA 336
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 118/222 (53%), Gaps = 18/222 (8%)
Query: 58 ERDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIY 117
E +I+ + + P I+ L F++ V I+E V+GG+ L + L+E +A ++
Sbjct: 58 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES--LTEDEATQFLK 115
Query: 118 ELAQAVQYLHGLGYVHRDIKPDNMLL----SATGHLKLTDFGSATQVDKNGRIKSIVPVG 173
++ V YLH H D+KP+N++L +KL DFG A +++ K+I G
Sbjct: 116 QILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF--G 173
Query: 174 TPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILAC 233
TPE+VAPE++ N+ G D+WSIGV++Y LL+G++PF ET T ++I A
Sbjct: 174 TPEFVAPEIV-----NYEPLGL--EADMWSIGVITYILLSGASPFLGETKQETLTNISAV 226
Query: 234 DTE-DTVSFPSSIRLSTAMVNFVQSLVQKLDARLNMDQVLGH 274
+ + D F ++ L+ + + LV+ R+ + Q L H
Sbjct: 227 NYDFDEEYFSNTSELAKDFIR--RLLVKDPKRRMTIAQSLEH 266
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 89/161 (55%), Gaps = 17/161 (10%)
Query: 65 SKCPYIVNLFYSFQDMNH----VYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELA 120
S P+IV + +++M+H + IME + GG+ + ++ + +E +A + ++
Sbjct: 79 SGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIG 138
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSAT---GHLKLTDFGSATQVDKNGRIKSIVPVGTPEY 177
A+Q+LH HRD+KP+N+L ++ LKLTDFG A + +N P TP Y
Sbjct: 139 TAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNAL---QTPCYTPYY 195
Query: 178 VAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
VAPEVL G + Y SCD+WS+GV+ Y LL G PF
Sbjct: 196 VAPEVL-------GPEKYDKSCDMWSLGVIMYILLCGFPPF 229
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 118/221 (53%), Gaps = 16/221 (7%)
Query: 5 KELRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTI------- 57
K L ++ V+ + F R + +G FG++ + + + + KK+ ++++
Sbjct: 174 KWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALN 233
Query: 58 ERDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIY 117
E+ I+ K ++V+L Y+++ + + ++ + GGD + + E++A FY
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAA 293
Query: 118 ELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEY 177
E+ ++ LH V+RD+KP+N+LL GH++++D G A V + IK VGT Y
Sbjct: 294 EICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR--VGTVGY 351
Query: 178 VAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
+APEV++ ++ YT S D W++G + YE++ G +PF
Sbjct: 352 MAPEVVK-------NERYTFSPDWWALGCLLYEMIAGQSPF 385
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 140/284 (49%), Gaps = 29/284 (10%)
Query: 7 LRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNT--------IE 58
RQ+NV +D + G F + EK + + K + + + ++ IE
Sbjct: 4 FRQENVD-DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE 62
Query: 59 RDIMVKSKC--PYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYI 116
R++ + + P ++ L +++ V I+E V GG+ L + L+E +A ++
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFL 120
Query: 117 YELAQAVQYLHGLGYVHRDIKPDNMLL----SATGHLKLTDFGSATQVDKNGRIKSIVPV 172
++ V YLH L H D+KP+N++L +K+ DFG A ++D K+I
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-- 178
Query: 173 GTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILA 232
GTPE+VAPE++ N+ G D+WSIGV++Y LL+G++PF +T T +++ A
Sbjct: 179 GTPEFVAPEIV-----NYEPLGL--EADMWSIGVITYILLSGASPFLGDTKQETLANVSA 231
Query: 233 CDTEDTVSFPSSIRLSTAMVNFVQS-LVQKLDARLNMDQVLGHP 275
+ E + S+ S +F++ LV+ R+ + L HP
Sbjct: 232 VNYEFEDEYFSNT--SALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 118/221 (53%), Gaps = 16/221 (7%)
Query: 5 KELRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTI------- 57
K L ++ V+ + F R + +G FG++ + + + + KK+ ++++
Sbjct: 174 KWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALN 233
Query: 58 ERDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIY 117
E+ I+ K ++V+L Y+++ + + ++ + GGD + + E++A FY
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAA 293
Query: 118 ELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEY 177
E+ ++ LH V+RD+KP+N+LL GH++++D G A V + IK VGT Y
Sbjct: 294 EICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR--VGTVGY 351
Query: 178 VAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
+APEV++ ++ YT S D W++G + YE++ G +PF
Sbjct: 352 MAPEVVK-------NERYTFSPDWWALGCLLYEMIAGQSPF 385
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 125/265 (47%), Gaps = 36/265 (13%)
Query: 22 FIQQGNFGDIYLVEEKQSHNTFVMKKVL---------REKMPNTIERDIMVKSKCPYIVN 72
F+ +G F + + + + F K V REKM ++E I ++V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKM--SMEISIHRSLAHQHVVG 81
Query: 73 LFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYV 132
F+D + V+ ++E + L + + L+E +AR+Y+ ++ QYLH +
Sbjct: 82 FHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVI 139
Query: 133 HRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGS 192
HRD+K N+ L+ +K+ DFG AT+V+ +G K + GTP Y+APEVL
Sbjct: 140 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTL-CGTPNYIAPEVLS-------K 191
Query: 193 DGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRLSTAMV 252
G++ D+WSIG + Y LL G PF L TY I ++ S P I A
Sbjct: 192 KGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRI----KKNEYSIPKHINPVAA-- 245
Query: 253 NFVQSLVQKL-----DARLNMDQVL 272
SL+QK+ AR ++++L
Sbjct: 246 ----SLIQKMLQTDPTARPTINELL 266
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 140/284 (49%), Gaps = 29/284 (10%)
Query: 7 LRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNT--------IE 58
RQ+NV +D + G F + EK + + K + + + ++ IE
Sbjct: 4 FRQENVD-DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE 62
Query: 59 RDIMVKSKC--PYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYI 116
R++ + + P ++ L +++ V I+E V GG+ L + L+E +A ++
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFL 120
Query: 117 YELAQAVQYLHGLGYVHRDIKPDNMLL----SATGHLKLTDFGSATQVDKNGRIKSIVPV 172
++ V YLH L H D+KP+N++L +K+ DFG A ++D K+I
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-- 178
Query: 173 GTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILA 232
GTPE+VAPE++ N+ G D+WSIGV++Y LL+G++PF +T T +++ A
Sbjct: 179 GTPEFVAPEIV-----NYEPLGL--EADMWSIGVITYILLSGASPFLGDTKQETLANVSA 231
Query: 233 CDTEDTVSFPSSIRLSTAMVNFVQS-LVQKLDARLNMDQVLGHP 275
+ E + S+ S +F++ LV+ R+ + L HP
Sbjct: 232 VNYEFEDEYFSNT--SALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 140/284 (49%), Gaps = 29/284 (10%)
Query: 7 LRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNT--------IE 58
RQ+NV +D + G F + EK + + K + + + ++ IE
Sbjct: 4 FRQENVDDY-YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE 62
Query: 59 RDIMVKSKC--PYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYI 116
R++ + + P ++ L +++ V I+E V GG+ L + L+E +A ++
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFL 120
Query: 117 YELAQAVQYLHGLGYVHRDIKPDNMLL----SATGHLKLTDFGSATQVDKNGRIKSIVPV 172
++ V YLH L H D+KP+N++L +K+ DFG A ++D K+I
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-- 178
Query: 173 GTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILA 232
GTPE+VAPE++ N+ G D+WSIGV++Y LL+G++PF +T T +++ A
Sbjct: 179 GTPEFVAPEIV-----NYEPLGL--EADMWSIGVITYILLSGASPFLGDTKQETLANVSA 231
Query: 233 CDTEDTVSFPSSIRLSTAMVNFVQS-LVQKLDARLNMDQVLGHP 275
+ E + S+ S +F++ LV+ R+ + L HP
Sbjct: 232 VNYEFEDEYFSNT--SALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 142/287 (49%), Gaps = 34/287 (11%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKV-LREKMPNTI---ERDIMVKSKCPYIVNLFYSFQ 78
I +G+ G + + EK + +KK+ LR++ + E IM +V+++ S+
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 79 DMNHVYFIMEYVTGG---DFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
+ ++ +ME++ GG D VT H ++E + + +A+ YLH G +HRD
Sbjct: 113 VGDELWVVMEFLEGGALTDIVT------HTRMNEEQIATVCLSVLRALSYLHNQGVIHRD 166
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGY 195
IK D++LL++ G +KL+DFG QV K + + VGTP ++APEV+ + Y
Sbjct: 167 IKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXL-VGTPYWMAPEVISRLP-------Y 218
Query: 196 TGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSI----RLSTAM 251
D+WS+G++ E++ G P+ E I D S P + ++S+ +
Sbjct: 219 GTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRI-----RD--SLPPRVKDLHKVSSVL 271
Query: 252 VNFVQ-SLVQKLDARLNMDQVLGHPVFDCLDSDPPCIPPPSQENKFH 297
F+ LV++ R ++LGHP F L P CI P ++ + H
Sbjct: 272 RGFLDLMLVREPSQRATAQELLGHP-FLKLAGPPSCIVPLMRQYRHH 317
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 112/227 (49%), Gaps = 32/227 (14%)
Query: 11 NVSASDFDIKRFIQQGNFGDIYL-------------VEEKQSHNTFVMKKVLREKMPNTI 57
++ ++ + + I +GNF + L + +K N+ ++K+ RE
Sbjct: 3 DLHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREV----- 57
Query: 58 ERDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIY 117
IM P IV LF + +Y +MEY +GG+ L HG++ E +AR
Sbjct: 58 --RIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL--VAHGWMKEKEARAKFR 113
Query: 118 ELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEY 177
++ AVQY H VHRD+K +N+LL A ++K+ DFG + + ++ + G+P Y
Sbjct: 114 QIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTF--CGSPPY 171
Query: 178 VAPEVLEWMEGNHGSDGYTGS-CDLWSIGVVSYELLTGSTPFNYETL 223
APE+ + Y G D+WS+GV+ Y L++GS PF+ + L
Sbjct: 172 AAPELFQ-------GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL 211
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 125/265 (47%), Gaps = 36/265 (13%)
Query: 22 FIQQGNFGDIYLVEEKQSHNTFVMKKVL---------REKMPNTIERDIMVKSKCPYIVN 72
F+ +G F + + + + F K V REKM ++E I ++V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKM--SMEISIHRSLAHQHVVG 81
Query: 73 LFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYV 132
F+D + V+ ++E + L + + L+E +AR+Y+ ++ QYLH +
Sbjct: 82 FHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVI 139
Query: 133 HRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGS 192
HRD+K N+ L+ +K+ DFG AT+V+ +G K + GTP Y+APEVL
Sbjct: 140 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTL-CGTPNYIAPEVLS-------K 191
Query: 193 DGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRLSTAMV 252
G++ D+WSIG + Y LL G PF L TY I ++ S P I A
Sbjct: 192 KGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRI----KKNEYSIPKHINPVAA-- 245
Query: 253 NFVQSLVQKL-----DARLNMDQVL 272
SL+QK+ AR ++++L
Sbjct: 246 ----SLIQKMLQTDPTARPTINELL 266
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 140/284 (49%), Gaps = 29/284 (10%)
Query: 7 LRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNT--------IE 58
RQ+NV +D + G F + EK + + K + + + ++ IE
Sbjct: 3 FRQENVDDY-YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE 61
Query: 59 RDIMVKSKC--PYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYI 116
R++ + + P ++ L +++ V I+E V GG+ L + L+E +A ++
Sbjct: 62 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFL 119
Query: 117 YELAQAVQYLHGLGYVHRDIKPDNMLL----SATGHLKLTDFGSATQVDKNGRIKSIVPV 172
++ V YLH L H D+KP+N++L +K+ DFG A ++D K+I
Sbjct: 120 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-- 177
Query: 173 GTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILA 232
GTPE+VAPE++ N+ G D+WSIGV++Y LL+G++PF +T T +++ A
Sbjct: 178 GTPEFVAPEIV-----NYEPLGL--EADMWSIGVITYILLSGASPFLGDTKQETLANVSA 230
Query: 233 CDTEDTVSFPSSIRLSTAMVNFVQS-LVQKLDARLNMDQVLGHP 275
+ E + S+ S +F++ LV+ R+ + L HP
Sbjct: 231 VNYEFEDEYFSNT--SALAKDFIRRLLVKDPKKRMTIQDSLQHP 272
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 98/166 (59%), Gaps = 14/166 (8%)
Query: 58 ERDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGD-FVTLLENQPHGYLSESKARFYI 116
E +I+ K P I+ + +F D Y ++E + GG+ F ++ N+ L E+ + Y
Sbjct: 190 EIEILKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVGNK---RLKEATCKLYF 245
Query: 117 YELAQAVQYLHGLGYVHRDIKPDNMLLSAT---GHLKLTDFGSATQVDKNGRIKSIVPVG 173
Y++ AVQYLH G +HRD+KP+N+LLS+ +K+TDFG + + + ++++ G
Sbjct: 246 YQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL--CG 303
Query: 174 TPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFN 219
TP Y+APEVL + G+ GY + D WS+GV+ + L+G PF+
Sbjct: 304 TPTYLAPEVLV----SVGTAGYNRAVDCWSLGVILFICLSGYPPFS 345
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 118/222 (53%), Gaps = 18/222 (8%)
Query: 58 ERDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIY 117
E +I+ + + P I+ L F++ V I+E V+GG+ L + L+E +A ++
Sbjct: 65 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES--LTEDEATQFLK 122
Query: 118 ELAQAVQYLHGLGYVHRDIKPDNMLL----SATGHLKLTDFGSATQVDKNGRIKSIVPVG 173
++ V YLH H D+KP+N++L +KL DFG A +++ K+I G
Sbjct: 123 QILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF--G 180
Query: 174 TPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILAC 233
TPE+VAPE++ N+ G D+WSIGV++Y LL+G++PF ET T ++I A
Sbjct: 181 TPEFVAPEIV-----NYEPLGL--EADMWSIGVITYILLSGASPFLGETKQETLTNISAV 233
Query: 234 DTE-DTVSFPSSIRLSTAMVNFVQSLVQKLDARLNMDQVLGH 274
+ + D F ++ L+ + + LV+ R+ + Q L H
Sbjct: 234 NYDFDEEYFSNTSELAKDFIR--RLLVKDPKRRMXIAQSLEH 273
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 140/284 (49%), Gaps = 29/284 (10%)
Query: 7 LRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNT--------IE 58
RQ+NV +D + G F + EK + + K + + + ++ IE
Sbjct: 4 FRQENVDDY-YDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE 62
Query: 59 RDIMVKSKC--PYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYI 116
R++ + + P ++ L +++ V I+E V GG+ L + L+E +A ++
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFL 120
Query: 117 YELAQAVQYLHGLGYVHRDIKPDNMLL----SATGHLKLTDFGSATQVDKNGRIKSIVPV 172
++ V YLH L H D+KP+N++L +K+ DFG A ++D K+I
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-- 178
Query: 173 GTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILA 232
GTPE+VAPE++ N+ G D+WSIGV++Y LL+G++PF +T T +++ A
Sbjct: 179 GTPEFVAPEIV-----NYEPLGL--EADMWSIGVITYILLSGASPFLGDTKQETLANVSA 231
Query: 233 CDTEDTVSFPSSIRLSTAMVNFVQS-LVQKLDARLNMDQVLGHP 275
+ E + S+ S +F++ LV+ R+ + L HP
Sbjct: 232 VNYEFEDEYFSNT--SALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 98/166 (59%), Gaps = 14/166 (8%)
Query: 58 ERDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGD-FVTLLENQPHGYLSESKARFYI 116
E +I+ K P I+ + +F D Y ++E + GG+ F ++ N+ L E+ + Y
Sbjct: 204 EIEILKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVGNK---RLKEATCKLYF 259
Query: 117 YELAQAVQYLHGLGYVHRDIKPDNMLLSAT---GHLKLTDFGSATQVDKNGRIKSIVPVG 173
Y++ AVQYLH G +HRD+KP+N+LLS+ +K+TDFG + + + ++++ G
Sbjct: 260 YQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL--CG 317
Query: 174 TPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFN 219
TP Y+APEVL + G+ GY + D WS+GV+ + L+G PF+
Sbjct: 318 TPTYLAPEVLV----SVGTAGYNRAVDCWSLGVILFICLSGYPPFS 359
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 140/284 (49%), Gaps = 29/284 (10%)
Query: 7 LRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNT--------IE 58
RQ+NV +D + G F + EK + + K + + + ++ IE
Sbjct: 4 FRQENVDDY-YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE 62
Query: 59 RDIMVKSKC--PYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYI 116
R++ + + P ++ L +++ V I+E V GG+ L + L+E +A ++
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFL 120
Query: 117 YELAQAVQYLHGLGYVHRDIKPDNMLL----SATGHLKLTDFGSATQVDKNGRIKSIVPV 172
++ V YLH L H D+KP+N++L +K+ DFG A ++D K+I
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-- 178
Query: 173 GTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILA 232
GTPE+VAPE++ N+ G D+WSIGV++Y LL+G++PF +T T +++ A
Sbjct: 179 GTPEFVAPEIV-----NYEPLGL--EADMWSIGVITYILLSGASPFLGDTKQETLANVSA 231
Query: 233 CDTEDTVSFPSSIRLSTAMVNFVQS-LVQKLDARLNMDQVLGHP 275
+ E + S+ S +F++ LV+ R+ + L HP
Sbjct: 232 VNYEFEDEYFSNT--SALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 140/284 (49%), Gaps = 29/284 (10%)
Query: 7 LRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNT--------IE 58
RQ+NV +D + G F + EK + + K + + + ++ IE
Sbjct: 3 FRQENVDDY-YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE 61
Query: 59 RDIMVKSKC--PYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYI 116
R++ + + P ++ L +++ V I+E V GG+ L + L+E +A ++
Sbjct: 62 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFL 119
Query: 117 YELAQAVQYLHGLGYVHRDIKPDNMLL----SATGHLKLTDFGSATQVDKNGRIKSIVPV 172
++ V YLH L H D+KP+N++L +K+ DFG A ++D K+I
Sbjct: 120 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-- 177
Query: 173 GTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILA 232
GTPE+VAPE++ N+ G D+WSIGV++Y LL+G++PF +T T +++ A
Sbjct: 178 GTPEFVAPEIV-----NYEPLGL--EADMWSIGVITYILLSGASPFLGDTKQETLANVSA 230
Query: 233 CDTEDTVSFPSSIRLSTAMVNFVQS-LVQKLDARLNMDQVLGHP 275
+ E + S+ S +F++ LV+ R+ + L HP
Sbjct: 231 VNYEFEDEYFSNT--SALAKDFIRRLLVKDPKKRMTIQDSLQHP 272
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 140/284 (49%), Gaps = 29/284 (10%)
Query: 7 LRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNT--------IE 58
RQ+NV +D + G F + EK + + K + + + ++ IE
Sbjct: 4 FRQENVDDY-YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE 62
Query: 59 RDIMVKSKC--PYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYI 116
R++ + + P ++ L +++ V I+E V GG+ L + L+E +A ++
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFL 120
Query: 117 YELAQAVQYLHGLGYVHRDIKPDNMLL----SATGHLKLTDFGSATQVDKNGRIKSIVPV 172
++ V YLH L H D+KP+N++L +K+ DFG A ++D K+I
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-- 178
Query: 173 GTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILA 232
GTPE+VAPE++ N+ G D+WSIGV++Y LL+G++PF +T T +++ A
Sbjct: 179 GTPEFVAPEIV-----NYEPLGL--EADMWSIGVITYILLSGASPFLGDTKQETLANVSA 231
Query: 233 CDTEDTVSFPSSIRLSTAMVNFVQS-LVQKLDARLNMDQVLGHP 275
+ E + S+ S +F++ LV+ R+ + L HP
Sbjct: 232 VNYEFEDEYFSNT--SALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 114/223 (51%), Gaps = 11/223 (4%)
Query: 58 ERDIMVK-SKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYI 116
E DI+ K S P I+ L +++ + + + + G+ L + LSE + R +
Sbjct: 60 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT--LSEKETRKIM 117
Query: 117 YELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPE 176
L + + LH L VHRD+KP+N+LL ++KLTDFG + Q+D +++ + GTP
Sbjct: 118 RALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREV--CGTPS 175
Query: 177 YVAPEVLEW-MEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDT 235
Y+APE++E M NH GY D+WS GV+ Y LL GS PF + + I++ +
Sbjct: 176 YLAPEIIECSMNDNH--PGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNY 233
Query: 236 EDTVSFPSSIRLSTAMVNFV-QSLVQKLDARLNMDQVLGHPVF 277
+ P S + + V + LV + R ++ L HP F
Sbjct: 234 Q--FGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFF 274
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 114/223 (51%), Gaps = 11/223 (4%)
Query: 58 ERDIMVK-SKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYI 116
E DI+ K S P I+ L +++ + + + + G+ L + LSE + R +
Sbjct: 73 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT--LSEKETRKIM 130
Query: 117 YELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPE 176
L + + LH L VHRD+KP+N+LL ++KLTDFG + Q+D +++ + GTP
Sbjct: 131 RALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREV--CGTPS 188
Query: 177 YVAPEVLEW-MEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDT 235
Y+APE++E M NH GY D+WS GV+ Y LL GS PF + + I++ +
Sbjct: 189 YLAPEIIECSMNDNH--PGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNY 246
Query: 236 EDTVSFPSSIRLSTAMVNFV-QSLVQKLDARLNMDQVLGHPVF 277
+ P S + + V + LV + R ++ L HP F
Sbjct: 247 Q--FGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFF 287
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 112/210 (53%), Gaps = 14/210 (6%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREK---MPNTIERDIMVKSKCPY--I 70
D+D+ + + +G +G++ L + + +K V ++ P I+++I + + + +
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENV 67
Query: 71 VNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLG 130
V + ++ N Y +EY +GG+ +E P + E A+ + ++L V YLHG+G
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 131 YVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPV-GTPEYVAPEVLEWMEGN 189
HRDIKP+N+LL +LK++DFG AT N R + + + GT YVAPE+L+ E
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE-- 183
Query: 190 HGSDGYTGSCDLWSIGVVSYELLTGSTPFN 219
+ D+WS G+V +L G P++
Sbjct: 184 ----FHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 111/210 (52%), Gaps = 14/210 (6%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREK---MPNTIERDIMVKSKCPY--I 70
D+D+ + + +G +G++ L + + +K V ++ P I+++I + + +
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 71 VNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLG 130
V + ++ N Y +EY +GG+ +E P + E A+ + ++L V YLHG+G
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 131 YVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPV-GTPEYVAPEVLEWMEGN 189
HRDIKP+N+LL +LK++DFG AT N R + + + GT YVAPE+L+ E
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE-- 182
Query: 190 HGSDGYTGSCDLWSIGVVSYELLTGSTPFN 219
+ D+WS G+V +L G P++
Sbjct: 183 ----FHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 119/220 (54%), Gaps = 18/220 (8%)
Query: 26 GNFGDIYLVEEKQSHNTFVMKKVLREKMPNT--IERDIMVKSKCPY--IVNLFYSFQDMN 81
G FG ++ EE + K + M + ++ +I V ++ + ++ L+ +F+ N
Sbjct: 100 GRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKN 159
Query: 82 HVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNM 141
+ +MEYV GG+ + ++ + L+E ++ ++ + ++++H + +H D+KP+N+
Sbjct: 160 DIVLVMEYVDGGELFDRIIDESYN-LTELDTILFMKQICEGIRHMHQMYILHLDLKPENI 218
Query: 142 LLSA--TGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSC 199
L +K+ DFG A + ++K V GTPE++APEV+ + D +
Sbjct: 219 LCVNRDAKQIKIIDFGLARRYKPREKLK--VNFGTPEFLAPEVVNY-------DFVSFPT 269
Query: 200 DLWSIGVVSYELLTGSTPFNYETLDMTYSSILAC--DTED 237
D+WS+GV++Y LL+G +PF + T ++ILAC D ED
Sbjct: 270 DMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLED 309
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 118/222 (53%), Gaps = 18/222 (8%)
Query: 58 ERDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIY 117
E +I+ + + P I+ L F++ V I+E V+GG+ L + L+E +A ++
Sbjct: 79 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES--LTEDEATQFLK 136
Query: 118 ELAQAVQYLHGLGYVHRDIKPDNMLL----SATGHLKLTDFGSATQVDKNGRIKSIVPVG 173
++ V YLH H D+KP+N++L +KL DFG A +++ K+I G
Sbjct: 137 QILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF--G 194
Query: 174 TPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILAC 233
TPE+VAPE++ N+ G D+WSIGV++Y LL+G++PF ET T ++I A
Sbjct: 195 TPEFVAPEIV-----NYEPLGL--EADMWSIGVITYILLSGASPFLGETKQETLTNISAV 247
Query: 234 DTE-DTVSFPSSIRLSTAMVNFVQSLVQKLDARLNMDQVLGH 274
+ + D F ++ L+ + + LV+ R+ + Q L H
Sbjct: 248 NYDFDEEYFSNTSELAKDFIR--RLLVKDPKRRMXIAQSLEH 287
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 111/210 (52%), Gaps = 14/210 (6%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREK---MPNTIERDIMVKSKCPY--I 70
D+D+ + + +G +G++ L + + +K V ++ P I+++I + + +
Sbjct: 6 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 65
Query: 71 VNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLG 130
V + ++ N Y +EY +GG+ +E P + E A+ + ++L V YLHG+G
Sbjct: 66 VKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIG 123
Query: 131 YVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPV-GTPEYVAPEVLEWMEGN 189
HRDIKP+N+LL +LK++DFG AT N R + + + GT YVAPE+L+ E
Sbjct: 124 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE-- 181
Query: 190 HGSDGYTGSCDLWSIGVVSYELLTGSTPFN 219
+ D+WS G+V +L G P++
Sbjct: 182 ----FHAEPVDVWSCGIVLTAMLAGELPWD 207
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 105/208 (50%), Gaps = 17/208 (8%)
Query: 17 FDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLR-EKMPNTIERDIMVKS--KCPYIVNL 73
+++ + I GNFG L+ +KQS+ +K + R EK+ ++R+I+ + P IV
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRF 80
Query: 74 FYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVH 133
H+ +MEY +GG+ + N G SE +ARF+ +L V Y H + H
Sbjct: 81 KEVILTPTHLAIVMEYASGGELFERICNA--GRFSEDEARFFFQQLISGVSYCHAMQVCH 138
Query: 134 RDIKPDNMLL--SATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHG 191
RD+K +N LL S LK+ FG + + + K VGTP Y+APEVL E
Sbjct: 139 RDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDT--VGTPAYIAPEVLLKKE---- 192
Query: 192 SDGYTGS-CDLWSIGVVSYELLTGSTPF 218
Y G D+WS GV Y +L G+ PF
Sbjct: 193 ---YDGKVADVWSCGVTLYVMLVGAYPF 217
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 111/210 (52%), Gaps = 14/210 (6%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREK---MPNTIERDIMVKSKCPY--I 70
D+D+ + + +G +G++ L + + +K V ++ P I+++I + + +
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 71 VNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLG 130
V + ++ N Y +EY +GG+ +E P + E A+ + ++L V YLHG+G
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 131 YVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPV-GTPEYVAPEVLEWMEGN 189
HRDIKP+N+LL +LK++DFG AT N R + + + GT YVAPE+L+ E
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE-- 182
Query: 190 HGSDGYTGSCDLWSIGVVSYELLTGSTPFN 219
+ D+WS G+V +L G P++
Sbjct: 183 ----FHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 111/210 (52%), Gaps = 14/210 (6%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREK---MPNTIERDIMVKSKCPY--I 70
D+D+ + + +G +G++ L + + +K V ++ P I+++I + + +
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 71 VNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLG 130
V + ++ N Y +EY +GG+ +E P + E A+ + ++L V YLHG+G
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 131 YVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPV-GTPEYVAPEVLEWMEGN 189
HRDIKP+N+LL +LK++DFG AT N R + + + GT YVAPE+L+ E
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE-- 182
Query: 190 HGSDGYTGSCDLWSIGVVSYELLTGSTPFN 219
+ D+WS G+V +L G P++
Sbjct: 183 ----FHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 140/284 (49%), Gaps = 29/284 (10%)
Query: 7 LRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNT--------IE 58
RQ+NV +D + G F + EK + + K + + + ++ IE
Sbjct: 4 FRQENVDDY-YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE 62
Query: 59 RDIMVKSKC--PYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYI 116
R++ + + P ++ L +++ V I+E V GG+ L + L+E +A ++
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFL 120
Query: 117 YELAQAVQYLHGLGYVHRDIKPDNMLL----SATGHLKLTDFGSATQVDKNGRIKSIVPV 172
++ V YLH L H D+KP+N++L +K+ DFG A ++D K+I
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-- 178
Query: 173 GTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILA 232
GTPE+VAPE++ N+ G D+WSIGV++Y LL+G++PF +T T +++ A
Sbjct: 179 GTPEFVAPEIV-----NYEPLGL--EADMWSIGVITYILLSGASPFLGDTKQETLANVSA 231
Query: 233 CDTEDTVSFPSSIRLSTAMVNFVQS-LVQKLDARLNMDQVLGHP 275
+ E + S+ S +F++ LV+ R+ + L HP
Sbjct: 232 VNYEFEDEYFSNT--SALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 111/210 (52%), Gaps = 14/210 (6%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREK---MPNTIERDIMVKSKCPY--I 70
D+D+ + + +G +G++ L + + +K V ++ P I+++I + + +
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 71 VNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLG 130
V + ++ N Y +EY +GG+ +E P + E A+ + ++L V YLHG+G
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 131 YVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPV-GTPEYVAPEVLEWMEGN 189
HRDIKP+N+LL +LK++DFG AT N R + + + GT YVAPE+L+ E
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE-- 183
Query: 190 HGSDGYTGSCDLWSIGVVSYELLTGSTPFN 219
+ D+WS G+V +L G P++
Sbjct: 184 ----FHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 111/210 (52%), Gaps = 14/210 (6%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREK---MPNTIERDIMVKSKCPY--I 70
D+D+ + + +G +G++ L + + +K V ++ P I+++I + + +
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENV 66
Query: 71 VNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLG 130
V + ++ N Y +EY +GG+ +E P + E A+ + ++L V YLHG+G
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 131 YVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPV-GTPEYVAPEVLEWMEGN 189
HRDIKP+N+LL +LK++DFG AT N R + + + GT YVAPE+L+ E
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE-- 182
Query: 190 HGSDGYTGSCDLWSIGVVSYELLTGSTPFN 219
+ D+WS G+V +L G P++
Sbjct: 183 ----FHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 111/210 (52%), Gaps = 14/210 (6%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREK---MPNTIERDIMVKSKCPY--I 70
D+D+ + + +G +G++ L + + +K V ++ P I+++I + + +
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 71 VNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLG 130
V + ++ N Y +EY +GG+ +E P + E A+ + ++L V YLHG+G
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 131 YVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPV-GTPEYVAPEVLEWMEGN 189
HRDIKP+N+LL +LK++DFG AT N R + + + GT YVAPE+L+ E
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE-- 182
Query: 190 HGSDGYTGSCDLWSIGVVSYELLTGSTPFN 219
+ D+WS G+V +L G P++
Sbjct: 183 ----FHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 111/210 (52%), Gaps = 14/210 (6%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREK---MPNTIERDIMVKSKCPY--I 70
D+D+ + + +G +G++ L + + +K V ++ P I+++I + + +
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENV 66
Query: 71 VNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLG 130
V + ++ N Y +EY +GG+ +E P + E A+ + ++L V YLHG+G
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 131 YVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPV-GTPEYVAPEVLEWMEGN 189
HRDIKP+N+LL +LK++DFG AT N R + + + GT YVAPE+L+ E
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE-- 182
Query: 190 HGSDGYTGSCDLWSIGVVSYELLTGSTPFN 219
+ D+WS G+V +L G P++
Sbjct: 183 ----FHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 111/210 (52%), Gaps = 14/210 (6%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREK---MPNTIERDIMVKSKCPY--I 70
D+D+ + + +G +G++ L + + +K V ++ P I+++I + + +
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 71 VNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLG 130
V + ++ N Y +EY +GG+ +E P + E A+ + ++L V YLHG+G
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 131 YVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPV-GTPEYVAPEVLEWMEGN 189
HRDIKP+N+LL +LK++DFG AT N R + + + GT YVAPE+L+ E
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE-- 183
Query: 190 HGSDGYTGSCDLWSIGVVSYELLTGSTPFN 219
+ D+WS G+V +L G P++
Sbjct: 184 ----FHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 140/284 (49%), Gaps = 29/284 (10%)
Query: 7 LRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNT--------IE 58
RQ+NV +D + G F + EK + + K + + + ++ IE
Sbjct: 4 FRQENVDDY-YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE 62
Query: 59 RDIMVKSKC--PYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYI 116
R++ + + P ++ L +++ V I+E V GG+ L + L+E +A ++
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFL 120
Query: 117 YELAQAVQYLHGLGYVHRDIKPDNMLL----SATGHLKLTDFGSATQVDKNGRIKSIVPV 172
++ V YLH L H D+KP+N++L +K+ DFG A ++D K+I
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-- 178
Query: 173 GTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILA 232
GTPE+VAPE++ N+ G D+WSIGV++Y LL+G++PF +T T +++ A
Sbjct: 179 GTPEFVAPEIV-----NYEPLGL--EADMWSIGVITYILLSGASPFLGDTKQETLANVSA 231
Query: 233 CDTEDTVSFPSSIRLSTAMVNFVQS-LVQKLDARLNMDQVLGHP 275
+ E + S+ S +F++ LV+ R+ + L HP
Sbjct: 232 VNYEFEDEYFSNT--SALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 109/223 (48%), Gaps = 32/223 (14%)
Query: 15 SDFDIKRFIQQGNFGDIYL-------------VEEKQSHNTFVMKKVLREKMPNTIERDI 61
++ + + I +GNF + L + +K N+ ++K+ RE I
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREV-------RI 66
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQ 121
M P IV LF + +Y +MEY +GG+ L HG + E +AR ++
Sbjct: 67 MKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL--VAHGRMKEKEARAKFRQIVS 124
Query: 122 AVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPE 181
AVQY H VHRD+K +N+LL A ++K+ DFG + + ++ + G+P Y APE
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTF--CGSPPYAAPE 182
Query: 182 VLEWMEGNHGSDGYTGS-CDLWSIGVVSYELLTGSTPFNYETL 223
+ + Y G D+WS+GV+ Y L++GS PF+ + L
Sbjct: 183 LFQ-------GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL 218
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 111/210 (52%), Gaps = 14/210 (6%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREK---MPNTIERDIMVKSKCPY--I 70
D+D+ + + +G +G++ L + + +K V ++ P I+++I + + +
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 71 VNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLG 130
V + ++ N Y +EY +GG+ +E P + E A+ + ++L V YLHG+G
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 131 YVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPV-GTPEYVAPEVLEWMEGN 189
HRDIKP+N+LL +LK++DFG AT N R + + + GT YVAPE+L+ E
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE-- 183
Query: 190 HGSDGYTGSCDLWSIGVVSYELLTGSTPFN 219
+ D+WS G+V +L G P++
Sbjct: 184 ----FHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 111/210 (52%), Gaps = 14/210 (6%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREK---MPNTIERDIMVKSKCPY--I 70
D+D+ + + +G +G++ L + + +K V ++ P I+++I + + +
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 71 VNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLG 130
V + ++ N Y +EY +GG+ +E P + E A+ + ++L V YLHG+G
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 131 YVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPV-GTPEYVAPEVLEWMEGN 189
HRDIKP+N+LL +LK++DFG AT N R + + + GT YVAPE+L+ E
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE-- 183
Query: 190 HGSDGYTGSCDLWSIGVVSYELLTGSTPFN 219
+ D+WS G+V +L G P++
Sbjct: 184 ----FHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 111/210 (52%), Gaps = 14/210 (6%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREK---MPNTIERDIMVKSKCPY--I 70
D+D+ + + +G +G++ L + + +K V ++ P I+++I + + +
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 71 VNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLG 130
V + ++ N Y +EY +GG+ +E P + E A+ + ++L V YLHG+G
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 131 YVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPV-GTPEYVAPEVLEWMEGN 189
HRDIKP+N+LL +LK++DFG AT N R + + + GT YVAPE+L+ E
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE-- 183
Query: 190 HGSDGYTGSCDLWSIGVVSYELLTGSTPFN 219
+ D+WS G+V +L G P++
Sbjct: 184 ----FHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 109/223 (48%), Gaps = 32/223 (14%)
Query: 15 SDFDIKRFIQQGNFGDIYL-------------VEEKQSHNTFVMKKVLREKMPNTIERDI 61
++ + + I +GNF + L + +K N+ ++K+ RE I
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREV-------RI 66
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQ 121
M P IV LF + +Y +MEY +GG+ L HG + E +AR ++
Sbjct: 67 MKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL--VAHGRMKEKEARAKFRQIVS 124
Query: 122 AVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPE 181
AVQY H VHRD+K +N+LL A ++K+ DFG + + ++ + G+P Y APE
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTF--CGSPPYAAPE 182
Query: 182 VLEWMEGNHGSDGYTGS-CDLWSIGVVSYELLTGSTPFNYETL 223
+ + Y G D+WS+GV+ Y L++GS PF+ + L
Sbjct: 183 LFQ-------GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL 218
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 111/210 (52%), Gaps = 14/210 (6%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREK---MPNTIERDIMVKSKCPY--I 70
D+D+ + + +G +G++ L + + +K V ++ P I+++I + + +
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENV 67
Query: 71 VNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLG 130
V + ++ N Y +EY +GG+ +E P + E A+ + ++L V YLHG+G
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 131 YVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPV-GTPEYVAPEVLEWMEGN 189
HRDIKP+N+LL +LK++DFG AT N R + + + GT YVAPE+L+ E
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE-- 183
Query: 190 HGSDGYTGSCDLWSIGVVSYELLTGSTPFN 219
+ D+WS G+V +L G P++
Sbjct: 184 ----FHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 111/210 (52%), Gaps = 14/210 (6%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREK---MPNTIERDIMVKSKCPY--I 70
D+D+ + + +G +G++ L + + +K V ++ P I+++I + + +
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 71 VNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLG 130
V + ++ N Y +EY +GG+ +E P + E A+ + ++L V YLHG+G
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 131 YVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPV-GTPEYVAPEVLEWMEGN 189
HRDIKP+N+LL +LK++DFG AT N R + + + GT YVAPE+L+ E
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE-- 182
Query: 190 HGSDGYTGSCDLWSIGVVSYELLTGSTPFN 219
+ D+WS G+V +L G P++
Sbjct: 183 ----FHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 140/284 (49%), Gaps = 29/284 (10%)
Query: 7 LRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNT--------IE 58
RQ+NV +D + G F + EK + + K + + + ++ IE
Sbjct: 4 FRQENVDDY-YDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE 62
Query: 59 RDIMVKSKC--PYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYI 116
R++ + + P ++ L +++ V I+E V GG+ L + L+E +A ++
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFL 120
Query: 117 YELAQAVQYLHGLGYVHRDIKPDNMLL----SATGHLKLTDFGSATQVDKNGRIKSIVPV 172
++ V YLH L H D+KP+N++L +K+ DFG A ++D K+I
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-- 178
Query: 173 GTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILA 232
GTPE+VAPE++ N+ G D+WSIGV++Y LL+G++PF +T T +++ A
Sbjct: 179 GTPEFVAPEIV-----NYEPLGL--EADMWSIGVITYILLSGASPFLGDTKQETLANVSA 231
Query: 233 CDTEDTVSFPSSIRLSTAMVNFVQS-LVQKLDARLNMDQVLGHP 275
+ E + S+ S +F++ LV+ R+ + L HP
Sbjct: 232 VNYEFEDEYFSNT--SALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 109/223 (48%), Gaps = 32/223 (14%)
Query: 15 SDFDIKRFIQQGNFGDIYL-------------VEEKQSHNTFVMKKVLREKMPNTIERDI 61
++ + + I +GNF + L + +K N+ ++K+ RE I
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREV-------RI 66
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQ 121
M P IV LF + +Y +MEY +GG+ L HG + E +AR ++
Sbjct: 67 MKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL--VAHGRMKEKEARAKFRQIVS 124
Query: 122 AVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPE 181
AVQY H VHRD+K +N+LL A ++K+ DFG + + ++ + G+P Y APE
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTF--CGSPPYAAPE 182
Query: 182 VLEWMEGNHGSDGYTGS-CDLWSIGVVSYELLTGSTPFNYETL 223
+ + Y G D+WS+GV+ Y L++GS PF+ + L
Sbjct: 183 LFQ-------GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL 218
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 111/210 (52%), Gaps = 14/210 (6%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREK---MPNTIERDIMVKSKCPY--I 70
D+D+ + + +G +G++ L + + +K V ++ P I+++I + + +
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 71 VNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLG 130
V + ++ N Y +EY +GG+ +E P + E A+ + ++L V YLHG+G
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 131 YVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPV-GTPEYVAPEVLEWMEGN 189
HRDIKP+N+LL +LK++DFG AT N R + + + GT YVAPE+L+ E
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE-- 182
Query: 190 HGSDGYTGSCDLWSIGVVSYELLTGSTPFN 219
+ D+WS G+V +L G P++
Sbjct: 183 ----FHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 108/223 (48%), Gaps = 32/223 (14%)
Query: 15 SDFDIKRFIQQGNFGDIYL-------------VEEKQSHNTFVMKKVLREKMPNTIERDI 61
++ + + I +GNF + L + +K N+ ++K+ RE I
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREV-------RI 66
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQ 121
M P IV LF + +Y +MEY +GG+ L HG + E +AR ++
Sbjct: 67 MKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL--VAHGRMKEKEARAKFRQIVS 124
Query: 122 AVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPE 181
AVQY H VHRD+K +N+LL A ++K+ DFG + + ++ + G P Y APE
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAF--CGAPPYAAPE 182
Query: 182 VLEWMEGNHGSDGYTGS-CDLWSIGVVSYELLTGSTPFNYETL 223
+ + Y G D+WS+GV+ Y L++GS PF+ + L
Sbjct: 183 LFQ-------GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL 218
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 111/210 (52%), Gaps = 14/210 (6%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREK---MPNTIERDIMVKSKCPY--I 70
D+D+ + + +G +G++ L + + +K V ++ P I+++I + + +
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 71 VNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLG 130
V + ++ N Y +EY +GG+ +E P + E A+ + ++L V YLHG+G
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 131 YVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPV-GTPEYVAPEVLEWMEGN 189
HRDIKP+N+LL +LK++DFG AT N R + + + GT YVAPE+L+ E
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE-- 182
Query: 190 HGSDGYTGSCDLWSIGVVSYELLTGSTPFN 219
+ D+WS G+V +L G P++
Sbjct: 183 ----FHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 111/210 (52%), Gaps = 14/210 (6%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREK---MPNTIERDIMVKSKCPY--I 70
D+D+ + + +G +G++ L + + +K V ++ P I+++I + + +
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 71 VNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLG 130
V + ++ N Y +EY +GG+ +E P + E A+ + ++L V YLHG+G
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 131 YVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPV-GTPEYVAPEVLEWMEGN 189
HRDIKP+N+LL +LK++DFG AT N R + + + GT YVAPE+L+ E
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE-- 182
Query: 190 HGSDGYTGSCDLWSIGVVSYELLTGSTPFN 219
+ D+WS G+V +L G P++
Sbjct: 183 ----FHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 17/204 (8%)
Query: 21 RF--IQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPN--TIERDIMV--KSKCPYIVNLF 74
RF I QG G +Y + + ++++ ++ P I +I+V ++K P IVN
Sbjct: 24 RFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYL 83
Query: 75 YSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHR 134
S+ + ++ +MEY+ GG ++ + E + E QA+++LH +HR
Sbjct: 84 DSYLVGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHR 140
Query: 135 DIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDG 194
DIK DN+LL G +KLTDFG Q+ +S + VGTP ++APEV+
Sbjct: 141 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXM-VGTPYWMAPEVVT-------RKA 192
Query: 195 YTGSCDLWSIGVVSYELLTGSTPF 218
Y D+WS+G+++ E++ G P+
Sbjct: 193 YGPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 139/284 (48%), Gaps = 29/284 (10%)
Query: 7 LRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNT--------IE 58
RQ+NV +D + G F + EK + + K + + + ++ IE
Sbjct: 4 FRQENVD-DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE 62
Query: 59 RDIMVKSKC--PYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYI 116
R++ + + P ++ L +++ V I+E V GG+ L + L+E +A ++
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFL 120
Query: 117 YELAQAVQYLHGLGYVHRDIKPDNMLL----SATGHLKLTDFGSATQVDKNGRIKSIVPV 172
++ V YLH L H D+KP+N++L +K+ DFG A ++D K+I
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-- 178
Query: 173 GTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILA 232
GTP +VAPE++ N+ G D+WSIGV++Y LL+G++PF +T T +++ A
Sbjct: 179 GTPAFVAPEIV-----NYEPLGL--EADMWSIGVITYILLSGASPFLGDTKQETLANVSA 231
Query: 233 CDTEDTVSFPSSIRLSTAMVNFVQS-LVQKLDARLNMDQVLGHP 275
+ E + S+ S +F++ LV+ R+ + L HP
Sbjct: 232 VNYEFEDEYFSNT--SALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 133/268 (49%), Gaps = 18/268 (6%)
Query: 26 GNFGDIYLVEEKQSHNTFVMKKVLREKMPN-----TIERDIMVKSKCPYIVNLFYSFQDM 80
G+FG +Y + K++ + KV+ K +E DI+ P IV L +F
Sbjct: 21 GDFGKVYKAQNKET-SVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYE 79
Query: 81 NHVYFIMEYVTGG--DFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKP 138
N+++ ++E+ GG D V L +P L+ES+ + + A+ YLH +HRD+K
Sbjct: 80 NNLWILIEFCAGGAVDAVMLELERP---LTESQIQVVCKQTLDALNYLHDNKIIHRDLKA 136
Query: 139 DNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGS 198
N+L + G +KL DFG + + + + +GTP ++APEV+ M Y
Sbjct: 137 GNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVV--MCETSKDRPYDYK 194
Query: 199 CDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRLSTAMVNFVQSL 258
D+WS+G+ E+ P ++E M +A T++ PS R S+ +F++
Sbjct: 195 ADVWSLGITLIEMAEIEPP-HHELNPMRVLLKIAKSEPPTLAQPS--RWSSNFKDFLKKC 251
Query: 259 VQK-LDARLNMDQVLGHPVFDCLDSDPP 285
++K +DAR Q+L HP F +DS+ P
Sbjct: 252 LEKNVDARWTTSQLLQHP-FVTVDSNKP 278
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 17/204 (8%)
Query: 21 RF--IQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPN--TIERDIMV--KSKCPYIVNLF 74
RF I QG G +Y + + ++++ ++ P I +I+V ++K P IVN
Sbjct: 24 RFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYL 83
Query: 75 YSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHR 134
S+ + ++ +MEY+ GG ++ + E + E QA+++LH +HR
Sbjct: 84 DSYLVGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHR 140
Query: 135 DIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDG 194
DIK DN+LL G +KLTDFG Q+ +S + VGTP ++APEV+
Sbjct: 141 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM-VGTPYWMAPEVVT-------RKA 192
Query: 195 YTGSCDLWSIGVVSYELLTGSTPF 218
Y D+WS+G+++ E++ G P+
Sbjct: 193 YGPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 104/212 (49%), Gaps = 23/212 (10%)
Query: 69 YIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHG 128
+I L++ + N ++ ++EY GG+ + +Q LSE + R ++ AV Y+H
Sbjct: 69 HICQLYHVLETANKIFMVLEYCPGGELFDYIISQDR--LSEEETRVVFRQIVSAVAYVHS 126
Query: 129 LGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEG 188
GY HRD+KP+N+L LKL DFG + N G+ Y APE+++
Sbjct: 127 QGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQ---- 182
Query: 189 NHGSDGYTGS-CDLWSIGVVSYELLTGSTPFNYETLDMTYSSIL--ACDTEDTVSFPSSI 245
Y GS D+WS+G++ Y L+ G PF+ + + Y I+ D +S PSSI
Sbjct: 183 ---GKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWLS-PSSI 238
Query: 246 RLSTAMVNFVQSLVQKLDA--RLNMDQVLGHP 275
L M+ ++D R++M +L HP
Sbjct: 239 LLLQQML--------QVDPKKRISMKNLLNHP 262
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 111/210 (52%), Gaps = 14/210 (6%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREK---MPNTIERDIMVKSKCPY--I 70
D+D+ + + +G +G++ L + + +K V ++ P I+++I + + +
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 71 VNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLG 130
V + ++ N Y +EY +GG+ +E P + E A+ + ++L V YLHG+G
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 131 YVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPV-GTPEYVAPEVLEWMEGN 189
HRDIKP+N+LL +LK++DFG AT N R + + + GT YVAPE+L+ E
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE-- 182
Query: 190 HGSDGYTGSCDLWSIGVVSYELLTGSTPFN 219
+ D+WS G+V +L G P++
Sbjct: 183 ----FHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 17/204 (8%)
Query: 21 RF--IQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPN--TIERDIMV--KSKCPYIVNLF 74
RF I QG G +Y + + ++++ ++ P I +I+V ++K P IVN
Sbjct: 25 RFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYL 84
Query: 75 YSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHR 134
S+ + ++ +MEY+ GG ++ + E + E QA+++LH +HR
Sbjct: 85 DSYLVGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHR 141
Query: 135 DIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDG 194
DIK DN+LL G +KLTDFG Q+ +S + VGTP ++APEV+
Sbjct: 142 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXM-VGTPYWMAPEVVT-------RKA 193
Query: 195 YTGSCDLWSIGVVSYELLTGSTPF 218
Y D+WS+G+++ E++ G P+
Sbjct: 194 YGPKVDIWSLGIMAIEMIEGEPPY 217
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 111/210 (52%), Gaps = 14/210 (6%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREK---MPNTIERDIMVKSKCPY--I 70
D+D+ + + +G +G++ L + + +K V ++ P I+++I + + +
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 71 VNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLG 130
V + ++ N Y +EY +GG+ +E P + E A+ + ++L V YLHG+G
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 131 YVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPV-GTPEYVAPEVLEWMEGN 189
HRDIKP+N+LL +LK++DFG AT N R + + + GT YVAPE+L+ E
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE-- 183
Query: 190 HGSDGYTGSCDLWSIGVVSYELLTGSTPFN 219
+ D+WS G+V +L G P++
Sbjct: 184 ----FHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 108/223 (48%), Gaps = 32/223 (14%)
Query: 15 SDFDIKRFIQQGNFGDIYL-------------VEEKQSHNTFVMKKVLREKMPNTIERDI 61
++ + + I +GNF + L + +K N+ ++K+ RE I
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREV-------RI 66
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQ 121
M P IV LF + +Y +MEY +GG+ L HG + E +AR ++
Sbjct: 67 MKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL--VAHGRMKEKEARAKFRQIVS 124
Query: 122 AVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPE 181
AVQY H VHRD+K +N+LL A ++K+ DFG + + ++ G+P Y APE
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEF--CGSPPYAAPE 182
Query: 182 VLEWMEGNHGSDGYTGS-CDLWSIGVVSYELLTGSTPFNYETL 223
+ + Y G D+WS+GV+ Y L++GS PF+ + L
Sbjct: 183 LFQ-------GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL 218
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 141/286 (49%), Gaps = 22/286 (7%)
Query: 10 KNVSASDF-DIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPN-----TIERDIMV 63
++++ DF +I + G FG +Y + K++ + KV+ K +E DI+
Sbjct: 31 RDLNPEDFWEIIGELGDGAFGKVYKAQNKET-SVLAAAKVIDTKSEEELEDYMVEIDILA 89
Query: 64 KSKCPYIVNLFYSFQDMNHVYFIMEYVTGG--DFVTLLENQPHGYLSESKARFYIYELAQ 121
P IV L +F N+++ ++E+ GG D V L +P L+ES+ + +
Sbjct: 90 SCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP---LTESQIQVVCKQTLD 146
Query: 122 AVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFG-SATQVDKNGRIKSIVPVGTPEYVAP 180
A+ YLH +HRD+K N+L + G +KL DFG SA R S +GTP ++AP
Sbjct: 147 ALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSF--IGTPYWMAP 204
Query: 181 EVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVS 240
EV+ M Y D+WS+G+ E+ P ++E M +A T++
Sbjct: 205 EVV--MCETSKDRPYDYKADVWSLGITLIEMAEIEPP-HHELNPMRVLLKIAKSEPPTLA 261
Query: 241 FPSSIRLSTAMVNFVQSLVQK-LDARLNMDQVLGHPVFDCLDSDPP 285
PS R S+ +F++ ++K +DAR Q+L HP F +DS+ P
Sbjct: 262 QPS--RWSSNFKDFLKKCLEKNVDARWTTSQLLQHP-FVTVDSNKP 304
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 139/284 (48%), Gaps = 29/284 (10%)
Query: 7 LRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNT--------IE 58
RQ+NV +D + G F + EK + + K + + + ++ IE
Sbjct: 4 FRQENVDDY-YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE 62
Query: 59 RDIMVKSKC--PYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYI 116
R++ + + P ++ L +++ V I E V GG+ L + L+E +A ++
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKES--LTEEEATEFL 120
Query: 117 YELAQAVQYLHGLGYVHRDIKPDNMLL----SATGHLKLTDFGSATQVDKNGRIKSIVPV 172
++ V YLH L H D+KP+N++L +K+ DFG A ++D K+I
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-- 178
Query: 173 GTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILA 232
GTPE+VAPE++ N+ G D+WSIGV++Y LL+G++PF +T T +++ A
Sbjct: 179 GTPEFVAPEIV-----NYEPLGL--EADMWSIGVITYILLSGASPFLGDTKQETLANVSA 231
Query: 233 CDTEDTVSFPSSIRLSTAMVNFVQS-LVQKLDARLNMDQVLGHP 275
+ E + S+ S +F++ LV+ R+ + L HP
Sbjct: 232 VNYEFEDEYFSNT--SALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 141/286 (49%), Gaps = 22/286 (7%)
Query: 10 KNVSASDF-DIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPN-----TIERDIMV 63
++++ DF +I + G FG +Y + K++ + KV+ K +E DI+
Sbjct: 31 RDLNPEDFWEIIGELGDGAFGKVYKAQNKET-SVLAAAKVIDTKSEEELEDYMVEIDILA 89
Query: 64 KSKCPYIVNLFYSFQDMNHVYFIMEYVTGG--DFVTLLENQPHGYLSESKARFYIYELAQ 121
P IV L +F N+++ ++E+ GG D V L +P L+ES+ + +
Sbjct: 90 SCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP---LTESQIQVVCKQTLD 146
Query: 122 AVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFG-SATQVDKNGRIKSIVPVGTPEYVAP 180
A+ YLH +HRD+K N+L + G +KL DFG SA R S +GTP ++AP
Sbjct: 147 ALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSF--IGTPYWMAP 204
Query: 181 EVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVS 240
EV+ M Y D+WS+G+ E+ P ++E M +A T++
Sbjct: 205 EVV--MCETSKDRPYDYKADVWSLGITLIEMAEIEPP-HHELNPMRVLLKIAKSEPPTLA 261
Query: 241 FPSSIRLSTAMVNFVQSLVQK-LDARLNMDQVLGHPVFDCLDSDPP 285
PS R S+ +F++ ++K +DAR Q+L HP F +DS+ P
Sbjct: 262 QPS--RWSSNFKDFLKKCLEKNVDARWTTSQLLQHP-FVTVDSNKP 304
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 110/210 (52%), Gaps = 14/210 (6%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREK---MPNTIERDIMVKSKCPY--I 70
D+D+ + + +G G++ L + + +K V ++ P I+++I + + +
Sbjct: 7 DWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 71 VNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLG 130
V + ++ N Y +EY +GG+ +E P + E A+ + ++L V YLHG+G
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 131 YVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPV-GTPEYVAPEVLEWMEGN 189
HRDIKP+N+LL +LK++DFG AT N R + + + GT YVAPE+L+ E
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE-- 182
Query: 190 HGSDGYTGSCDLWSIGVVSYELLTGSTPFN 219
+ D+WS G+V +L G P++
Sbjct: 183 ----FHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 142/287 (49%), Gaps = 24/287 (8%)
Query: 10 KNVSASDF-DIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPN-----TIERDIMV 63
++++ DF +I + G FG +Y + K++ + KV+ K +E DI+
Sbjct: 31 RDLNPEDFWEIIGELGDGAFGKVYKAQNKET-SVLAAAKVIDTKSEEELEDYMVEIDILA 89
Query: 64 KSKCPYIVNLFYSFQDMNHVYFIMEYVTGG--DFVTLLENQPHGYLSESKARFYIYELAQ 121
P IV L +F N+++ ++E+ GG D V L +P L+ES+ + +
Sbjct: 90 SCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP---LTESQIQVVCKQTLD 146
Query: 122 AVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRI--KSIVPVGTPEYVA 179
A+ YLH +HRD+K N+L + G +KL DFG + KN R + +GTP ++A
Sbjct: 147 ALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSA---KNTRXIQRRDXFIGTPYWMA 203
Query: 180 PEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTV 239
PEV+ M Y D+WS+G+ E+ P ++E M +A T+
Sbjct: 204 PEVV--MCETSKDRPYDYKADVWSLGITLIEMAEIEPP-HHELNPMRVLLKIAKSEPPTL 260
Query: 240 SFPSSIRLSTAMVNFVQSLVQK-LDARLNMDQVLGHPVFDCLDSDPP 285
+ PS R S+ +F++ ++K +DAR Q+L HP F +DS+ P
Sbjct: 261 AQPS--RWSSNFKDFLKKCLEKNVDARWTTSQLLQHP-FVTVDSNKP 304
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 17/204 (8%)
Query: 21 RF--IQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPN--TIERDIMV--KSKCPYIVNLF 74
RF I QG G +Y + + ++++ ++ P I +I+V ++K P IVN
Sbjct: 24 RFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYL 83
Query: 75 YSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHR 134
S+ + ++ +MEY+ GG ++ + E + E QA+++LH +HR
Sbjct: 84 DSYLVGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHR 140
Query: 135 DIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDG 194
DIK DN+LL G +KLTDFG Q+ +S + VGTP ++APEV+
Sbjct: 141 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEM-VGTPYWMAPEVVT-------RKA 192
Query: 195 YTGSCDLWSIGVVSYELLTGSTPF 218
Y D+WS+G+++ E++ G P+
Sbjct: 193 YGPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 116/227 (51%), Gaps = 22/227 (9%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP----NTIERD--IMVKSKCPY 69
++D+K + +G F + K + F K + +K+ +ER+ I K + P
Sbjct: 30 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPN 89
Query: 70 IVNLFYSFQDMNHVYFIMEYVTGGD-FVTLLENQPHGYLSESKARFYIYELAQAVQYLHG 128
IV L S Q+ + Y + + VTGG+ F ++ + + SE+ A I ++ +++ Y H
Sbjct: 90 IVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE---FYSEADASHCIQQILESIAYCHS 146
Query: 129 LGYVHRDIKPDNMLLSA---TGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEW 185
G VHR++KP+N+LL++ +KL DFG A +V+ + GTP Y++PEVL+
Sbjct: 147 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF--AGTPGYLSPEVLK- 203
Query: 186 MEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILA 232
D Y+ D+W+ GV+ Y LL G PF E Y+ I A
Sbjct: 204 ------KDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKA 244
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 129/276 (46%), Gaps = 32/276 (11%)
Query: 14 ASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPN----TIERDIMVKSKC-- 67
A ++I + +G+FG++ +++ + + +K + + N TI R++ + K
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 68 PYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLH 127
P I+ LF +D + Y + E TGG+ + + SE A I ++ + Y+H
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR--FSEHDAARIIKQVFSGITYMH 138
Query: 128 GLGYVHRDIKPDNMLLSAT---GHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLE 184
VHRD+KP+N+LL + +K+ DFG +T +N ++K +GT Y+APEVL
Sbjct: 139 KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKD--RIGTAYYIAPEVLR 196
Query: 185 WMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF----NYETLDMTYSSILACDTEDTVS 240
Y CD+WS GV+ Y LL+G+ PF Y+ L + A D +
Sbjct: 197 --------GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRT 248
Query: 241 FPSSIR-LSTAMVNFVQSLVQKLDARLNMDQVLGHP 275
+ L M+ F SL R+ Q L HP
Sbjct: 249 ISDDAKDLIRKMLTFHPSL------RITATQCLEHP 278
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 115/226 (50%), Gaps = 25/226 (11%)
Query: 11 NVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIE---RDIMVKSKC 67
+++ D++++ I G + +K++ EK +++ ++I S+C
Sbjct: 11 SINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQC 70
Query: 68 --PYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLEN------QPHGYLSESKARFYIYEL 119
P IV+ + SF + ++ +M+ ++GG + ++++ G L ES + E+
Sbjct: 71 HHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREV 130
Query: 120 AQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRI------KSIVPVG 173
+ ++YLH G +HRD+K N+LL G +++ DFG + + G I K+ VG
Sbjct: 131 LEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTF--VG 188
Query: 174 TPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFN 219
TP ++APEV+E + GY D+WS G+ + EL TG+ P++
Sbjct: 189 TPCWMAPEVMEQVR------GYDFKADIWSFGITAIELATGAAPYH 228
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 124/252 (49%), Gaps = 28/252 (11%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKV---LREKMPNTIERDIMVKSKC--PYIVNLFYSF 77
I +G+FG+++ + ++ +K + E I+++I V S+C Y+ + S+
Sbjct: 31 IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYGSY 90
Query: 78 QDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIK 137
+ ++ IMEY+ GG + LL P E + + E+ + + YLH +HRDIK
Sbjct: 91 LKGSKLWIIMEYLGGGSALDLLRAGP---FDEFQIATMLKEILKGLDYLHSEKKIHRDIK 147
Query: 138 PDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTG 197
N+LLS G +KL DFG A Q+ + +IK VGTP ++APEV++ Y
Sbjct: 148 AANVLLSEQGDVKLADFGVAGQL-TDTQIKRNTFVGTPFWMAPEVIQ-------QSAYDS 199
Query: 198 SCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRLSTAMVNFVQS 257
D+WS+G+ + EL G P + DM +L ++ T + +F +S
Sbjct: 200 KADIWSLGITAIELAKGEPPNS----DMHPMRVLFLIPKNNP--------PTLVGDFTKS 247
Query: 258 LVQKLDARLNMD 269
+ +DA LN D
Sbjct: 248 FKEFIDACLNKD 259
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 105/204 (51%), Gaps = 17/204 (8%)
Query: 21 RF--IQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPN--TIERDIMV--KSKCPYIVNLF 74
RF I QG G +Y + + ++++ ++ P I +I+V ++K P IVN
Sbjct: 25 RFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYL 84
Query: 75 YSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHR 134
S+ + ++ +MEY+ GG ++ + E + E QA+++LH +HR
Sbjct: 85 DSYLVGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHR 141
Query: 135 DIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDG 194
+IK DN+LL G +KLTDFG Q+ +S + VGTP ++APEV+
Sbjct: 142 NIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM-VGTPYWMAPEVVT-------RKA 193
Query: 195 YTGSCDLWSIGVVSYELLTGSTPF 218
Y D+WS+G+++ E++ G P+
Sbjct: 194 YGPKVDIWSLGIMAIEMIEGEPPY 217
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 129/276 (46%), Gaps = 32/276 (11%)
Query: 14 ASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPN----TIERDIMVKSKC-- 67
A ++I + +G+FG++ +++ + + +K + + N TI R++ + K
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 68 PYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLH 127
P I+ LF +D + Y + E TGG+ + + SE A I ++ + Y+H
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR--FSEHDAARIIKQVFSGITYMH 138
Query: 128 GLGYVHRDIKPDNMLLSAT---GHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLE 184
VHRD+KP+N+LL + +K+ DFG +T +N ++K +GT Y+APEVL
Sbjct: 139 KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKD--RIGTAYYIAPEVLR 196
Query: 185 WMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF----NYETLDMTYSSILACDTEDTVS 240
Y CD+WS GV+ Y LL+G+ PF Y+ L + A D +
Sbjct: 197 --------GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRT 248
Query: 241 FPSSIR-LSTAMVNFVQSLVQKLDARLNMDQVLGHP 275
+ L M+ F SL R+ Q L HP
Sbjct: 249 ISDDAKDLIRKMLTFHPSL------RITATQCLEHP 278
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 115/231 (49%), Gaps = 33/231 (14%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLR---------------EK 52
++ + S F +++ + G +G++ L +EK H+ +K + + EK
Sbjct: 30 KEGKIGESYFKVRK-LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEK 88
Query: 53 MPNTIERDI-MVKS-KCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSES 110
I +I ++KS P I+ LF F+D + Y + E+ GG+ + N+ E
Sbjct: 89 FHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK--FDEC 146
Query: 111 KARFYIYELAQAVQYLHGLGYVHRDIKPDNMLL---SATGHLKLTDFGSATQVDKNGRIK 167
A + ++ + YLH VHRDIKP+N+LL ++ ++K+ DFG ++ K+ +++
Sbjct: 147 DAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLR 206
Query: 168 SIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
+GT Y+APEVL+ Y CD+WS GV+ Y LL G PF
Sbjct: 207 D--RLGTAYYIAPEVLK--------KKYNEKCDVWSCGVIMYILLCGYPPF 247
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 138/274 (50%), Gaps = 29/274 (10%)
Query: 21 RFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPN-------TIERDIMVKSKCPYIVNL 73
R + +G FG+++ + K + + KK+ ++++ +E+ I+ K +IV+L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 74 FYSFQDMNHVYFIMEYVTGGDF----VTLLENQPHGYLSESKARFYIYELAQAVQYLHGL 129
Y+F+ + +M + GGD + E+ P E +A FY ++ +++LH
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPG--FQEPRAIFYTAQIVSGLEHLHQR 308
Query: 130 GYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGN 189
++RD+KP+N+LL G+++++D G A ++ K G+ K+ GTP ++APE+L E
Sbjct: 309 NIIYRDLKPENVLLDDDGNVRISDLGLAVEL-KAGQTKTKGYAGTPGFMAPELLLGEE-- 365
Query: 190 HGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRLST 249
Y S D +++GV YE++ PF + + E V++P + S
Sbjct: 366 -----YDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPD--KFSP 418
Query: 250 AMVNFVQSLVQK-LDARLNM-----DQVLGHPVF 277
A +F ++L+QK + RL D + HP+F
Sbjct: 419 ASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLF 452
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 138/274 (50%), Gaps = 29/274 (10%)
Query: 21 RFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPN-------TIERDIMVKSKCPYIVNL 73
R + +G FG+++ + K + + KK+ ++++ +E+ I+ K +IV+L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 74 FYSFQDMNHVYFIMEYVTGGDF----VTLLENQPHGYLSESKARFYIYELAQAVQYLHGL 129
Y+F+ + +M + GGD + E+ P E +A FY ++ +++LH
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPG--FQEPRAIFYTAQIVSGLEHLHQR 308
Query: 130 GYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGN 189
++RD+KP+N+LL G+++++D G A ++ K G+ K+ GTP ++APE+L E
Sbjct: 309 NIIYRDLKPENVLLDDDGNVRISDLGLAVEL-KAGQTKTKGYAGTPGFMAPELLLGEE-- 365
Query: 190 HGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRLST 249
Y S D +++GV YE++ PF + + E V++P + S
Sbjct: 366 -----YDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPD--KFSP 418
Query: 250 AMVNFVQSLVQK-LDARLNM-----DQVLGHPVF 277
A +F ++L+QK + RL D + HP+F
Sbjct: 419 ASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLF 452
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 138/274 (50%), Gaps = 29/274 (10%)
Query: 21 RFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPN-------TIERDIMVKSKCPYIVNL 73
R + +G FG+++ + K + + KK+ ++++ +E+ I+ K +IV+L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 74 FYSFQDMNHVYFIMEYVTGGDF----VTLLENQPHGYLSESKARFYIYELAQAVQYLHGL 129
Y+F+ + +M + GGD + E+ P E +A FY ++ +++LH
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPG--FQEPRAIFYTAQIVSGLEHLHQR 308
Query: 130 GYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGN 189
++RD+KP+N+LL G+++++D G A ++ K G+ K+ GTP ++APE+L E
Sbjct: 309 NIIYRDLKPENVLLDDDGNVRISDLGLAVEL-KAGQTKTKGYAGTPGFMAPELLLGEE-- 365
Query: 190 HGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRLST 249
Y S D +++GV YE++ PF + + E V++P + S
Sbjct: 366 -----YDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPD--KFSP 418
Query: 250 AMVNFVQSLVQK-LDARLNM-----DQVLGHPVF 277
A +F ++L+QK + RL D + HP+F
Sbjct: 419 ASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLF 452
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 116/227 (51%), Gaps = 22/227 (9%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP----NTIERD--IMVKSKCPY 69
++D+K + +G F + K + F K + +K+ +ER+ I K + P
Sbjct: 6 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPN 65
Query: 70 IVNLFYSFQDMNHVYFIMEYVTGGD-FVTLLENQPHGYLSESKARFYIYELAQAVQYLHG 128
IV L S Q+ + Y + + VTGG+ F ++ + + SE+ A I ++ +++ Y H
Sbjct: 66 IVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE---FYSEADASHCIQQILESIAYCHS 122
Query: 129 LGYVHRDIKPDNMLLSA---TGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEW 185
G VHR++KP+N+LL++ +KL DFG A +V+ + GTP Y++PEVL+
Sbjct: 123 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF--AGTPGYLSPEVLK- 179
Query: 186 MEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILA 232
D Y+ D+W+ GV+ Y LL G PF E Y+ I A
Sbjct: 180 ------KDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKA 220
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 116/227 (51%), Gaps = 22/227 (9%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP----NTIERD--IMVKSKCPY 69
++D+K + +G F + K + F K + +K+ +ER+ I K + P
Sbjct: 7 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPN 66
Query: 70 IVNLFYSFQDMNHVYFIMEYVTGGD-FVTLLENQPHGYLSESKARFYIYELAQAVQYLHG 128
IV L S Q+ + Y + + VTGG+ F ++ + + SE+ A I ++ +++ Y H
Sbjct: 67 IVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE---FYSEADASHCIQQILESIAYCHS 123
Query: 129 LGYVHRDIKPDNMLLSA---TGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEW 185
G VHR++KP+N+LL++ +KL DFG A +V+ + GTP Y++PEVL+
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF--AGTPGYLSPEVLK- 180
Query: 186 MEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILA 232
D Y+ D+W+ GV+ Y LL G PF E Y+ I A
Sbjct: 181 ------KDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKA 221
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 138/274 (50%), Gaps = 29/274 (10%)
Query: 21 RFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPN-------TIERDIMVKSKCPYIVNL 73
R + +G FG+++ + K + + KK+ ++++ +E+ I+ K +IV+L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 74 FYSFQDMNHVYFIMEYVTGGDF----VTLLENQPHGYLSESKARFYIYELAQAVQYLHGL 129
Y+F+ + +M + GGD + E+ P E +A FY ++ +++LH
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPG--FQEPRAIFYTAQIVSGLEHLHQR 308
Query: 130 GYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGN 189
++RD+KP+N+LL G+++++D G A ++ K G+ K+ GTP ++APE+L E
Sbjct: 309 NIIYRDLKPENVLLDDDGNVRISDLGLAVEL-KAGQTKTKGYAGTPGFMAPELLLGEE-- 365
Query: 190 HGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRLST 249
Y S D +++GV YE++ PF + + E V++P + S
Sbjct: 366 -----YDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPD--KFSP 418
Query: 250 AMVNFVQSLVQK-LDARLNM-----DQVLGHPVF 277
A +F ++L+QK + RL D + HP+F
Sbjct: 419 ASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLF 452
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 115/226 (50%), Gaps = 25/226 (11%)
Query: 11 NVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIE---RDIMVKSKC 67
+++ D++++ I G + +K++ EK +++ ++I S+C
Sbjct: 6 SINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQC 65
Query: 68 --PYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLEN------QPHGYLSESKARFYIYEL 119
P IV+ + SF + ++ +M+ ++GG + ++++ G L ES + E+
Sbjct: 66 HHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREV 125
Query: 120 AQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRI------KSIVPVG 173
+ ++YLH G +HRD+K N+LL G +++ DFG + + G I K+ VG
Sbjct: 126 LEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTF--VG 183
Query: 174 TPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFN 219
TP ++APEV+E + GY D+WS G+ + EL TG+ P++
Sbjct: 184 TPCWMAPEVMEQVR------GYDFKADIWSFGITAIELATGAAPYH 223
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 92/182 (50%), Gaps = 19/182 (10%)
Query: 66 KCPYIVNLFYSFQDMNHVYFIMEYVTGGD-FVTLLENQPHGYLSESKARFYIYELAQAVQ 124
K P IV L S + H Y I + VTGG+ F ++ + Y SE+ A I ++ +AV
Sbjct: 79 KHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVARE---YYSEADASHCIQQILEAVL 135
Query: 125 YLHGLGYVHRDIKPDNMLLSA---TGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPE 181
+ H +G VHRD+KP+N+LL++ +KL DFG A +V+ + GTP Y++PE
Sbjct: 136 HCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ-AWFGFAGTPGYLSPE 194
Query: 182 VLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSF 241
VL D Y DLW+ GV+ Y LL G PF E Y I A F
Sbjct: 195 VLR-------KDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKA----GAYDF 243
Query: 242 PS 243
PS
Sbjct: 244 PS 245
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 116/227 (51%), Gaps = 22/227 (9%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP----NTIERD--IMVKSKCPY 69
++D+K + +G F + K + F K + +K+ +ER+ I K + P
Sbjct: 7 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPN 66
Query: 70 IVNLFYSFQDMNHVYFIMEYVTGGD-FVTLLENQPHGYLSESKARFYIYELAQAVQYLHG 128
IV L S Q+ + Y + + VTGG+ F ++ + + SE+ A I ++ +++ Y H
Sbjct: 67 IVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE---FYSEADASHCIQQILESIAYCHS 123
Query: 129 LGYVHRDIKPDNMLLSA---TGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEW 185
G VHR++KP+N+LL++ +KL DFG A +V+ + GTP Y++PEVL+
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF--AGTPGYLSPEVLK- 180
Query: 186 MEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILA 232
D Y+ D+W+ GV+ Y LL G PF E Y+ I A
Sbjct: 181 ------KDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKA 221
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 113/222 (50%), Gaps = 17/222 (7%)
Query: 58 ERDIMVKSKCPYIVNLFYSFQDMN--HVYFIMEYVTGGDFVTLLENQPHGYLSESKARFY 115
E I+ K P +V L D N H+Y + E V G + + +P LSE +ARFY
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKP---LSEDQARFY 142
Query: 116 IYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTP 175
+L + ++YLH +HRDIKP N+L+ GH+K+ DFG + + + + S VGTP
Sbjct: 143 FQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNT-VGTP 201
Query: 176 EYVAPEVLEWMEGNHGSDGYTG-SCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACD 234
++APE L + ++G + D+W++GV Y + G PF E + +S I
Sbjct: 202 AFMAPESL-----SETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKI---- 252
Query: 235 TEDTVSFPSSIRLSTAMVNFVQSLVQK-LDARLNMDQVLGHP 275
+ FP ++ + + + ++ K ++R+ + ++ HP
Sbjct: 253 KSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHP 294
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 139/279 (49%), Gaps = 28/279 (10%)
Query: 5 KELRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTI----ERD 60
KEL +K + A D + +G FG ++ E S T+ M K ++ K + + E
Sbjct: 1 KELYEKYMIAED------LGRGEFGIVHRCVETSSKKTY-MAKFVKVKGTDQVLVKKEIS 53
Query: 61 IMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELA 120
I+ ++ I++L SF+ M + I E+++G D + N L+E + Y++++
Sbjct: 54 ILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERI-NTSAFELNEREIVSYVHQVC 112
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSA--TGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYV 178
+A+Q+LH H DI+P+N++ + +K+ +FG A Q+ + + PEY
Sbjct: 113 EALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFT--APEYY 170
Query: 179 APEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACD-TED 237
APEV H D + + D+WS+G + Y LL+G PF ET +I+ + T D
Sbjct: 171 APEV-------HQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFD 223
Query: 238 TVSFPSSIRLSTAMVNFV-QSLVQKLDARLNMDQVLGHP 275
+F +S ++FV + LV++ +R+ + L HP
Sbjct: 224 EEAFKE---ISIEAMDFVDRLLVKERKSRMTASEALQHP 259
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 107/213 (50%), Gaps = 19/213 (8%)
Query: 26 GNFGDIYLVEEKQSHNTFVMKKVLREKM-----PNTIERDI--MVKSKCPYIVNLFYSFQ 78
G FG + + E + + + +K + R+K+ I+R+I + + P+I+ L+
Sbjct: 22 GTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVIS 81
Query: 79 DMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKP 138
+ +MEYV+GG+ + HG + E +AR ++ AV Y H VHRD+KP
Sbjct: 82 TPTDFFMVMEYVSGGELFDYICK--HGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKP 139
Query: 139 DNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGS 198
+N+LL A + K+ DFG + + +++ G+P Y APEV+ Y G
Sbjct: 140 ENVLLDAHMNAKIADFGLSNMMSDGEFLRT--SCGSPNYAAPEVIS-------GRLYAGP 190
Query: 199 -CDLWSIGVVSYELLTGSTPFNYETLDMTYSSI 230
D+WS GV+ Y LL G+ PF+ E + + I
Sbjct: 191 EVDIWSCGVILYALLCGTLPFDDEHVPTLFKKI 223
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 108/216 (50%), Gaps = 18/216 (8%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNT----IERDIMVKSKC--P 68
++ + + I +GNF + L + +K + + ++ ++ + R++ + P
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHP 73
Query: 69 YIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHG 128
IV LF + +Y + EY +GG+ L HG E +AR ++ AVQY H
Sbjct: 74 NIVKLFEVIETEKTLYLVXEYASGGEVFDYL--VAHGRXKEKEARAKFRQIVSAVQYCHQ 131
Query: 129 LGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEG 188
VHRD+K +N+LL A ++K+ DFG + + ++ + G P Y APE+ + +
Sbjct: 132 KFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAF--CGAPPYAAPELFQGKK- 188
Query: 189 NHGSDGYTGS-CDLWSIGVVSYELLTGSTPFNYETL 223
Y G D+WS+GV+ Y L++GS PF+ + L
Sbjct: 189 ------YDGPEVDVWSLGVILYTLVSGSLPFDGQNL 218
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 92/182 (50%), Gaps = 19/182 (10%)
Query: 66 KCPYIVNLFYSFQDMNHVYFIMEYVTGGD-FVTLLENQPHGYLSESKARFYIYELAQAVQ 124
K P IV L S + H Y I + VTGG+ F ++ + Y SE+ A I ++ +AV
Sbjct: 68 KHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVARE---YYSEADASHCIQQILEAVL 124
Query: 125 YLHGLGYVHRDIKPDNMLLSA---TGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPE 181
+ H +G VHR++KP+N+LL++ +KL DFG A +V+ + GTP Y++PE
Sbjct: 125 HCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ-AWFGFAGTPGYLSPE 183
Query: 182 VLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSF 241
VL D Y DLW+ GV+ Y LL G PF E Y I A F
Sbjct: 184 VLR-------KDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKA----GAYDF 232
Query: 242 PS 243
PS
Sbjct: 233 PS 234
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 106/213 (49%), Gaps = 19/213 (8%)
Query: 26 GNFGDIYLVEEKQSHNTFVMKKVLREKM-----PNTIERDI--MVKSKCPYIVNLFYSFQ 78
G FG + + E + + + +K + R+K+ I+R+I + + P+I+ L+
Sbjct: 22 GTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVIS 81
Query: 79 DMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKP 138
+ +MEYV+GG+ + HG + E +AR ++ AV Y H VHRD+KP
Sbjct: 82 TPTDFFMVMEYVSGGELFDYICK--HGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKP 139
Query: 139 DNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGS 198
+N+LL A + K+ DFG + + ++ G+P Y APEV+ Y G
Sbjct: 140 ENVLLDAHMNAKIADFGLSNMMSDGEFLRD--SCGSPNYAAPEVIS-------GRLYAGP 190
Query: 199 -CDLWSIGVVSYELLTGSTPFNYETLDMTYSSI 230
D+WS GV+ Y LL G+ PF+ E + + I
Sbjct: 191 EVDIWSCGVILYALLCGTLPFDDEHVPTLFKKI 223
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 97/171 (56%), Gaps = 14/171 (8%)
Query: 66 KCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVT-LLENQPHGYL-SESKARFYIYELAQAV 123
K P+IV L ++ +Y + E++ G D +++ G++ SE+ A Y+ ++ +A+
Sbjct: 84 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEAL 143
Query: 124 QYLHGLGYVHRDIKPDNMLLSA---TGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAP 180
+Y H +HRD+KP+N+LL++ + +KL DFG A Q+ ++G + VGTP ++AP
Sbjct: 144 RYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAG-GRVGTPHFMAP 202
Query: 181 EVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSIL 231
EV++ + Y D+W GV+ + LL+G PF Y T + + I+
Sbjct: 203 EVVK-------REPYGKPVDVWGCGVILFILLSGCLPF-YGTKERLFEGII 245
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 123/244 (50%), Gaps = 27/244 (11%)
Query: 26 GNFGDIYLVEEKQSHNTFVMKKVLREKM-----PNTIERDI--MVKSKCPYIVNLFYSFQ 78
G FG + + + + + + +K + R+K+ I R+I + + P+I+ L+
Sbjct: 27 GTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVIS 86
Query: 79 DMNHVYFIMEYVTGGD-FVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIK 137
+ ++ +MEYV+GG+ F + +N G L E ++R ++ V Y H VHRD+K
Sbjct: 87 TPSDIFMVMEYVSGGELFDYICKN---GRLDEKESRRLFQQILSGVDYCHRHMVVHRDLK 143
Query: 138 PDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTG 197
P+N+LL A + K+ DFG + + ++ G+P Y APEV+ Y G
Sbjct: 144 PENVLLDAHMNAKIADFGLSNMMSDGEFLRX--SCGSPNYAAPEVI-------SGRLYAG 194
Query: 198 S-CDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRLSTAMVNFVQ 256
D+WS GV+ Y LL G+ PF+ + + + I CD F + L+ ++++ ++
Sbjct: 195 PEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKI--CDG----IFYTPQYLNPSVISLLK 248
Query: 257 SLVQ 260
++Q
Sbjct: 249 HMLQ 252
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 101/208 (48%), Gaps = 24/208 (11%)
Query: 26 GNFGDIYLVEEKQSHNTFVMKKVLREKMPNTI-------ERDIMVKSKCPYIVNLFYSFQ 78
G +G++ L ++K + +K + + + T E ++ + P I+ L+ F+
Sbjct: 15 GAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFE 74
Query: 79 DMNHVYFIMEYVTGGD-FVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIK 137
D + Y +ME GG+ F ++ Q SE A + ++ YLH VHRD+K
Sbjct: 75 DKRNYYLVMEVYRGGELFDEIILRQK---FSEVDAAVIMKQVLSGTTYLHKHNIVHRDLK 131
Query: 138 PDNMLL---SATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDG 194
P+N+LL S +K+ DFG + + G++K +GT Y+APEVL
Sbjct: 132 PENLLLESKSRDALIKIVDFGLSAHFEVGGKMKE--RLGTAYYIAPEVLR--------KK 181
Query: 195 YTGSCDLWSIGVVSYELLTGSTPFNYET 222
Y CD+WS GV+ Y LL G PF +T
Sbjct: 182 YDEKCDVWSCGVILYILLCGYPPFGGQT 209
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 109/219 (49%), Gaps = 19/219 (8%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMVKSKC 67
R + VS +D + I G+FG +Y + S +KKVL++K E IM K
Sbjct: 16 RPQEVSYTD---TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDH 72
Query: 68 PYIVNLFYSF------QDMNHVYFIMEYVTGGDF-VTLLENQPHGYLSESKARFYIYELA 120
IV L Y F +D+ ++ +++YV + V ++ L + Y+Y+L
Sbjct: 73 CNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSA-TGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVA 179
+++ Y+H G HRDIKP N+LL T LKL DFGSA Q+ + ++ + + Y A
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRYYRA 190
Query: 180 PEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
PE++ G+ YT S D+WS G V ELL G F
Sbjct: 191 PELI------FGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 101/215 (46%), Gaps = 27/215 (12%)
Query: 84 YFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLL 143
Y + E + GG ++ + + H +E +A + ++A A+ +LH G HRD+KP+N+L
Sbjct: 87 YLVFEKMRGGSILSHIHKRRH--FNELEASVVVQDVASALDFLHNKGIAHRDLKPENILC 144
Query: 144 ---SATGHLKLTDFGSATQVDKNGRIKSI------VPVGTPEYVAPEVLEWMEGNHGSDG 194
+ +K+ DFG + + NG I P G+ EY+APEV+E + +
Sbjct: 145 EHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAF--SEEASI 202
Query: 195 YTGSCDLWSIGVVSYELLTGSTPF-NYETLDMTYSSILACDT----------EDTVSFPS 243
Y CDLWS+GV+ Y LL+G PF D + AC E FP
Sbjct: 203 YDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPD 262
Query: 244 S--IRLSTAMVNFVQS-LVQKLDARLNMDQVLGHP 275
+S A + + LV+ RL+ QVL HP
Sbjct: 263 KDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHP 297
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 100/207 (48%), Gaps = 23/207 (11%)
Query: 26 GNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMVKSKC------PYIVNLFYSFQD 79
G +G++ L +K +H +K + + + + ++ + P I+ L+ F+D
Sbjct: 48 GAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFED 107
Query: 80 MNHVYFIMEYVTGGDFVTLLENQPHGY-LSESKARFYIYELAQAVQYLHGLGYVHRDIKP 138
+ Y +ME GG+ L + H +E A I ++ V YLH VHRD+KP
Sbjct: 108 KRNYYLVMECYKGGE---LFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKP 164
Query: 139 DNMLLSAT---GHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGY 195
+N+LL + +K+ DFG + + ++K +GT Y+APEVL Y
Sbjct: 165 ENLLLESKEKDALIKIVDFGLSAVFENQKKMKE--RLGTAYYIAPEVLR--------KKY 214
Query: 196 TGSCDLWSIGVVSYELLTGSTPFNYET 222
CD+WSIGV+ + LL G PF +T
Sbjct: 215 DEKCDVWSIGVILFILLAGYPPFGGQT 241
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 104/229 (45%), Gaps = 27/229 (11%)
Query: 70 IVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGL 129
I+ L F+D Y + E + GG + ++ Q H +E +A + ++A A+ +LH
Sbjct: 73 ILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKH--FNEREASRVVRDVAAALDFLHTK 130
Query: 130 GYVHRDIKPDNMLLSA---TGHLKLTDFGSATQVDKNGRIKSI------VPVGTPEYVAP 180
G HRD+KP+N+L + +K+ DF + + N I P G+ EY+AP
Sbjct: 131 GIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAP 190
Query: 181 EVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF-NYETLDMTYSSILACDT---- 235
EV+E + Y CDLWS+GVV Y +L+G PF + D + C
Sbjct: 191 EVVEVFTDQ--ATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNK 248
Query: 236 ------EDTVSFPSS--IRLSTAMVNFVQS-LVQKLDARLNMDQVLGHP 275
E FP +S+ + + LV+ RL+ QVL HP
Sbjct: 249 LFESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHP 297
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 24/211 (11%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTI-------ERDIMVKSKCPYIVNLFY 75
+ G +G++ L ++K + +K + + + T E ++ + P I+ L+
Sbjct: 29 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 88
Query: 76 SFQDMNHVYFIMEYVTGGD-FVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHR 134
F+D + Y +ME GG+ F ++ Q SE A + ++ YLH VHR
Sbjct: 89 FFEDKRNYYLVMEVYRGGELFDEIILRQK---FSEVDAAVIMKQVLSGTTYLHKHNIVHR 145
Query: 135 DIKPDNMLL---SATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHG 191
D+KP+N+LL S +K+ DFG + + G++K +GT Y+APEVL
Sbjct: 146 DLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKE--RLGTAYYIAPEVLR------- 196
Query: 192 SDGYTGSCDLWSIGVVSYELLTGSTPFNYET 222
Y CD+WS GV+ Y LL G PF +T
Sbjct: 197 -KKYDEKCDVWSCGVILYILLCGYPPFGGQT 226
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 108/219 (49%), Gaps = 19/219 (8%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMVKSKC 67
R + VS +D + I G+FG +Y + S +KKVL++K E IM K
Sbjct: 50 RPQEVSYTD---TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDH 106
Query: 68 PYIVNLFYSF------QDMNHVYFIMEYVTGGDF-VTLLENQPHGYLSESKARFYIYELA 120
IV L Y F +D ++ +++YV + V ++ L + Y+Y+L
Sbjct: 107 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 166
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSA-TGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVA 179
+++ Y+H G HRDIKP N+LL T LKL DFGSA Q+ + ++ + + Y A
Sbjct: 167 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRYYRA 224
Query: 180 PEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
PE++ G+ YT S D+WS G V ELL G F
Sbjct: 225 PELI------FGATDYTSSIDVWSAGCVLAELLLGQPIF 257
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 108/219 (49%), Gaps = 19/219 (8%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMVKSKC 67
R + VS +D + I G+FG +Y + S +KKVL++K E IM K
Sbjct: 28 RPQEVSYTD---TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDH 84
Query: 68 PYIVNLFYSF------QDMNHVYFIMEYVTGGDF-VTLLENQPHGYLSESKARFYIYELA 120
IV L Y F +D ++ +++YV + V ++ L + Y+Y+L
Sbjct: 85 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 144
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSA-TGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVA 179
+++ Y+H G HRDIKP N+LL T LKL DFGSA Q+ + ++ + + Y A
Sbjct: 145 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRYYRA 202
Query: 180 PEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
PE++ G+ YT S D+WS G V ELL G F
Sbjct: 203 PELI------FGATDYTSSIDVWSAGCVLAELLLGQPIF 235
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 108/219 (49%), Gaps = 19/219 (8%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMVKSKC 67
R + VS +D + I G+FG +Y + S +KKVL++K E IM K
Sbjct: 35 RPQEVSYTD---TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDH 91
Query: 68 PYIVNLFYSF------QDMNHVYFIMEYVTGGDF-VTLLENQPHGYLSESKARFYIYELA 120
IV L Y F +D ++ +++YV + V ++ L + Y+Y+L
Sbjct: 92 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 151
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSA-TGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVA 179
+++ Y+H G HRDIKP N+LL T LKL DFGSA Q+ + ++ + + Y A
Sbjct: 152 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRYYRA 209
Query: 180 PEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
PE++ G+ YT S D+WS G V ELL G F
Sbjct: 210 PELI------FGATDYTSSIDVWSAGCVLAELLLGQPIF 242
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 100/198 (50%), Gaps = 16/198 (8%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERD-------IMVKSKCPYIVNLFY 75
I +G+FG LV+ + +V+K++ +M ++ ER+ ++ K P IV
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRM-SSKEREESRREVAVLANMKHPNIVQYRE 90
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
SF++ +Y +M+Y GGD + Q E + + ++ A++++H +HRD
Sbjct: 91 SFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRD 150
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGY 195
IK N+ L+ G ++L DFG A ++ + +GTP Y++PE+ E + Y
Sbjct: 151 IKSQNIFLTKDGTVQLGDFGIARVLNSTVELARAC-IGTPYYLSPEICE-------NKPY 202
Query: 196 TGSCDLWSIGVVSYELLT 213
D+W++G V YEL T
Sbjct: 203 NNKSDIWALGCVLYELCT 220
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 108/219 (49%), Gaps = 19/219 (8%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMVKSKC 67
R + VS +D + I G+FG +Y + S +KKVL++K E IM K
Sbjct: 24 RPQEVSYTD---TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDH 80
Query: 68 PYIVNLFYSF------QDMNHVYFIMEYVTGGDF-VTLLENQPHGYLSESKARFYIYELA 120
IV L Y F +D ++ +++YV + V ++ L + Y+Y+L
Sbjct: 81 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 140
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSA-TGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVA 179
+++ Y+H G HRDIKP N+LL T LKL DFGSA Q+ + ++ + + Y A
Sbjct: 141 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRYYRA 198
Query: 180 PEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
PE++ G+ YT S D+WS G V ELL G F
Sbjct: 199 PELI------FGATDYTSSIDVWSAGCVLAELLLGQPIF 231
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 107/219 (48%), Gaps = 19/219 (8%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMVKSKC 67
R + VS +D + I G+FG +Y + S +KKVL+ K E IM K
Sbjct: 16 RPQEVSYTD---TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLDH 72
Query: 68 PYIVNLFYSF------QDMNHVYFIMEYVTGGDF-VTLLENQPHGYLSESKARFYIYELA 120
IV L Y F +D ++ +++YV + V ++ L + Y+Y+L
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSA-TGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVA 179
+++ Y+H G HRDIKP N+LL T LKL DFGSA Q+ + ++ + + Y A
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRYYRA 190
Query: 180 PEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
PE++ G+ YT S D+WS G V ELL G F
Sbjct: 191 PELI------FGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 108/219 (49%), Gaps = 19/219 (8%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMVKSKC 67
R + VS +D + I G+FG +Y + S +KKVL++K E IM K
Sbjct: 17 RPQEVSYTD---TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDH 73
Query: 68 PYIVNLFYSF------QDMNHVYFIMEYVTGGDF-VTLLENQPHGYLSESKARFYIYELA 120
IV L Y F +D ++ +++YV + V ++ L + Y+Y+L
Sbjct: 74 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 133
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSA-TGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVA 179
+++ Y+H G HRDIKP N+LL T LKL DFGSA Q+ + ++ + + Y A
Sbjct: 134 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRYYRA 191
Query: 180 PEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
PE++ G+ YT S D+WS G V ELL G F
Sbjct: 192 PELI------FGATDYTSSIDVWSAGCVLAELLLGQPIF 224
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 108/219 (49%), Gaps = 19/219 (8%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMVKSKC 67
R + VS +D + I G+FG +Y + S +KKVL++K E IM K
Sbjct: 28 RPQEVSYTD---TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDH 84
Query: 68 PYIVNLFYSF------QDMNHVYFIMEYVTGGDF-VTLLENQPHGYLSESKARFYIYELA 120
IV L Y F +D ++ +++YV + V ++ L + Y+Y+L
Sbjct: 85 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 144
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSA-TGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVA 179
+++ Y+H G HRDIKP N+LL T LKL DFGSA Q+ + ++ + + Y A
Sbjct: 145 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRYYRA 202
Query: 180 PEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
PE++ G+ YT S D+WS G V ELL G F
Sbjct: 203 PELI------FGATDYTSSIDVWSAGCVLAELLLGQPIF 235
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 108/219 (49%), Gaps = 19/219 (8%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMVKSKC 67
R + VS +D + I G+FG +Y + S +KKVL++K E IM K
Sbjct: 16 RPQEVSYTD---TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDH 72
Query: 68 PYIVNLFYSF------QDMNHVYFIMEYVTGGDF-VTLLENQPHGYLSESKARFYIYELA 120
IV L Y F +D ++ +++YV + V ++ L + Y+Y+L
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSA-TGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVA 179
+++ Y+H G HRDIKP N+LL T LKL DFGSA Q+ + ++ + + Y A
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRYYRA 190
Query: 180 PEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
PE++ G+ YT S D+WS G V ELL G F
Sbjct: 191 PELI------FGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 108/219 (49%), Gaps = 19/219 (8%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMVKSKC 67
R + VS +D + I G+FG +Y + S +KKVL++K E IM K
Sbjct: 16 RPQEVSYTD---TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDH 72
Query: 68 PYIVNLFYSF------QDMNHVYFIMEYVTGGDF-VTLLENQPHGYLSESKARFYIYELA 120
IV L Y F +D ++ +++YV + V ++ L + Y+Y+L
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSA-TGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVA 179
+++ Y+H G HRDIKP N+LL T LKL DFGSA Q+ + ++ + + Y A
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRYYRA 190
Query: 180 PEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
PE++ G+ YT S D+WS G V ELL G F
Sbjct: 191 PELI------FGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 103/217 (47%), Gaps = 22/217 (10%)
Query: 66 KCPYIVNLFYSFQDMNHVYFIMEYVTGGD-FVTLLENQPHGYLSESKARFYIYELAQAVQ 124
K P IV L S + Y + + VTGG+ F ++ + Y SE+ A I+++ ++V
Sbjct: 88 KHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE---YYSEADASHCIHQILESVN 144
Query: 125 YLHGLGYVHRDIKPDNMLLSA---TGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPE 181
++H VHRD+KP+N+LL++ +KL DFG A +V + GTP Y++PE
Sbjct: 145 HIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQ-AWFGFAGTPGYLSPE 203
Query: 182 VLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSF 241
VL D Y D+W+ GV+ Y LL G PF E Y I A F
Sbjct: 204 VLR-------KDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKA----GAYDF 252
Query: 242 PSS--IRLSTAMVNFV-QSLVQKLDARLNMDQVLGHP 275
PS ++ N + Q L R+ DQ L HP
Sbjct: 253 PSPEWDTVTPEAKNLINQMLTINPAKRITADQALKHP 289
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 111/225 (49%), Gaps = 20/225 (8%)
Query: 17 FDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLRE-----KMPNTIERDI--MVKSKCPY 69
+ I+ + +G+FG + L ++ +K + R+ M +ER+I + + P+
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPH 70
Query: 70 IVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGL 129
I+ L+ + ++EY G F ++E + ++E + R + ++ A++Y H
Sbjct: 71 IIKLYDVITTPTDIVMVIEYAGGELFDYIVEKK---RMTEDEGRRFFQQIICAIEYCHRH 127
Query: 130 GYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGN 189
VHRD+KP+N+LL ++K+ DFG + + +K+ G+P Y APEV+
Sbjct: 128 KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKT--SCGSPNYAAPEVIN----- 180
Query: 190 HGSDGYTGS-CDLWSIGVVSYELLTGSTPFNYETLDMTYSSILAC 233
Y G D+WS G+V Y +L G PF+ E + + + +C
Sbjct: 181 --GKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSC 223
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 108/219 (49%), Gaps = 19/219 (8%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMVKSKC 67
R + VS +D + I G+FG +Y + S +KKVL++K E IM K
Sbjct: 50 RPQEVSYTD---TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDH 106
Query: 68 PYIVNLFYSF------QDMNHVYFIMEYVTGGDF-VTLLENQPHGYLSESKARFYIYELA 120
IV L Y F +D ++ +++YV + V ++ L + Y+Y+L
Sbjct: 107 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 166
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSA-TGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVA 179
+++ Y+H G HRDIKP N+LL T LKL DFGSA Q+ + ++ + + Y A
Sbjct: 167 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRYYRA 224
Query: 180 PEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
PE++ G+ YT S D+WS G V ELL G F
Sbjct: 225 PELI------FGATDYTSSIDVWSAGCVLAELLLGQPIF 257
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 108/219 (49%), Gaps = 19/219 (8%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMVKSKC 67
R + VS +D + I G+FG +Y + S +KKVL++K E IM K
Sbjct: 29 RPQEVSYTD---TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDH 85
Query: 68 PYIVNLFYSF------QDMNHVYFIMEYVTGGDF-VTLLENQPHGYLSESKARFYIYELA 120
IV L Y F +D ++ +++YV + V ++ L + Y+Y+L
Sbjct: 86 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 145
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSA-TGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVA 179
+++ Y+H G HRDIKP N+LL T LKL DFGSA Q+ + ++ + + Y A
Sbjct: 146 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRYYRA 203
Query: 180 PEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
PE++ G+ YT S D+WS G V ELL G F
Sbjct: 204 PELI------FGATDYTSSIDVWSAGCVLAELLLGQPIF 236
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 108/219 (49%), Gaps = 19/219 (8%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMVKSKC 67
R + VS +D + I G+FG +Y + S +KKVL++K E IM K
Sbjct: 44 RPQEVSYTD---TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDH 100
Query: 68 PYIVNLFYSF------QDMNHVYFIMEYVTGGDF-VTLLENQPHGYLSESKARFYIYELA 120
IV L Y F +D ++ +++YV + V ++ L + Y+Y+L
Sbjct: 101 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 160
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSA-TGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVA 179
+++ Y+H G HRDIKP N+LL T LKL DFGSA Q+ + ++ + + Y A
Sbjct: 161 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRYYRA 218
Query: 180 PEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
PE++ G+ YT S D+WS G V ELL G F
Sbjct: 219 PELI------FGATDYTSSIDVWSAGCVLAELLLGQPIF 251
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 108/219 (49%), Gaps = 19/219 (8%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMVKSKC 67
R + VS +D + I G+FG +Y + S +KKVL++K E IM K
Sbjct: 21 RPQEVSYTD---TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDH 77
Query: 68 PYIVNLFYSF------QDMNHVYFIMEYVTGGDF-VTLLENQPHGYLSESKARFYIYELA 120
IV L Y F +D ++ +++YV + V ++ L + Y+Y+L
Sbjct: 78 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 137
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSA-TGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVA 179
+++ Y+H G HRDIKP N+LL T LKL DFGSA Q+ + ++ + + Y A
Sbjct: 138 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRYYRA 195
Query: 180 PEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
PE++ G+ YT S D+WS G V ELL G F
Sbjct: 196 PELI------FGATDYTSSIDVWSAGCVLAELLLGQPIF 228
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 108/219 (49%), Gaps = 19/219 (8%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMVKSKC 67
R + VS +D + I G+FG +Y + S +KKVL++K E IM K
Sbjct: 52 RPQEVSYTD---TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDH 108
Query: 68 PYIVNLFYSF------QDMNHVYFIMEYVTGGDF-VTLLENQPHGYLSESKARFYIYELA 120
IV L Y F +D ++ +++YV + V ++ L + Y+Y+L
Sbjct: 109 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 168
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSA-TGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVA 179
+++ Y+H G HRDIKP N+LL T LKL DFGSA Q+ + ++ + + Y A
Sbjct: 169 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRYYRA 226
Query: 180 PEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
PE++ G+ YT S D+WS G V ELL G F
Sbjct: 227 PELI------FGATDYTSSIDVWSAGCVLAELLLGQPIF 259
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 108/219 (49%), Gaps = 19/219 (8%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMVKSKC 67
R + VS +D + I G+FG +Y + S +KKVL++K E IM K
Sbjct: 20 RPQEVSYTD---TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDH 76
Query: 68 PYIVNLFYSF------QDMNHVYFIMEYVTGGDF-VTLLENQPHGYLSESKARFYIYELA 120
IV L Y F +D ++ +++YV + V ++ L + Y+Y+L
Sbjct: 77 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 136
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSA-TGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVA 179
+++ Y+H G HRDIKP N+LL T LKL DFGSA Q+ + ++ + + Y A
Sbjct: 137 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRYYRA 194
Query: 180 PEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
PE++ G+ YT S D+WS G V ELL G F
Sbjct: 195 PELI------FGATDYTSSIDVWSAGCVLAELLLGQPIF 227
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 108/219 (49%), Gaps = 19/219 (8%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMVKSKC 67
R + VS +D + I G+FG +Y + S +KKVL++K E IM K
Sbjct: 54 RPQEVSYTD---TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDH 110
Query: 68 PYIVNLFYSF------QDMNHVYFIMEYVTGGDF-VTLLENQPHGYLSESKARFYIYELA 120
IV L Y F +D ++ +++YV + V ++ L + Y+Y+L
Sbjct: 111 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 170
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSA-TGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVA 179
+++ Y+H G HRDIKP N+LL T LKL DFGSA Q+ + ++ + + Y A
Sbjct: 171 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRYYRA 228
Query: 180 PEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
PE++ G+ YT S D+WS G V ELL G F
Sbjct: 229 PELI------FGATDYTSSIDVWSAGCVLAELLLGQPIF 261
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 108/219 (49%), Gaps = 19/219 (8%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMVKSKC 67
R + VS +D + I G+FG +Y + S +KKVL++K E IM K
Sbjct: 16 RPQEVSYTD---TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDH 72
Query: 68 PYIVNLFYSF------QDMNHVYFIMEYVTGGDF-VTLLENQPHGYLSESKARFYIYELA 120
IV L Y F +D ++ +++YV + V ++ L + Y+Y+L
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSA-TGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVA 179
+++ Y+H G HRDIKP N+LL T LKL DFGSA Q+ + ++ + + Y A
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRYYRA 190
Query: 180 PEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
PE++ G+ YT S D+WS G V ELL G F
Sbjct: 191 PELI------FGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 89/182 (48%), Gaps = 19/182 (10%)
Query: 66 KCPYIVNLFYSFQDMNHVYFIMEYVTGGD-FVTLLENQPHGYLSESKARFYIYELAQAVQ 124
K P IV L S + Y + + VTGG+ F ++ + Y SE+ A I ++ ++V
Sbjct: 61 KHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE---YYSEADASHCIQQILESVN 117
Query: 125 YLHGLGYVHRDIKPDNMLL---SATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPE 181
+ H G VHRD+KP+N+LL S +KL DFG A +V + + GTP Y++PE
Sbjct: 118 HCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQ-AWFGFAGTPGYLSPE 176
Query: 182 VLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSF 241
VL D Y D+W+ GV+ Y LL G PF E Y I A F
Sbjct: 177 VLR-------KDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKA----GAYDF 225
Query: 242 PS 243
PS
Sbjct: 226 PS 227
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 105/201 (52%), Gaps = 17/201 (8%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKV-LREKMPNTI---ERDIMVKSKCPYIVNLFYSFQ 78
I +G+ G + + + S +KK+ LR++ + E IM + +V ++ S+
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 79 DMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKP 138
+ ++ +ME++ GG ++ H ++E + + QA+ LH G +HRDIK
Sbjct: 219 VGDELWVVMEFLEGGALTDIVT---HTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKS 275
Query: 139 DNMLLSATGHLKLTDFGSATQVDKN-GRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTG 197
D++LL+ G +KL+DFG QV K R K + VGTP ++APE++ + Y
Sbjct: 276 DSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL--VGTPYWMAPELISRLP-------YGP 326
Query: 198 SCDLWSIGVVSYELLTGSTPF 218
D+WS+G++ E++ G P+
Sbjct: 327 EVDIWSLGIMVIEMVDGEPPY 347
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 108/219 (49%), Gaps = 19/219 (8%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMVKSKC 67
R + VS +D + I G+FG +Y + S +KKVL++K E IM K
Sbjct: 95 RPQEVSYTD---TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDH 151
Query: 68 PYIVNLFYSF------QDMNHVYFIMEYVTGGDF-VTLLENQPHGYLSESKARFYIYELA 120
IV L Y F +D ++ +++YV + V ++ L + Y+Y+L
Sbjct: 152 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 211
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSA-TGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVA 179
+++ Y+H G HRDIKP N+LL T LKL DFGSA Q+ + ++ + + Y A
Sbjct: 212 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRYYRA 269
Query: 180 PEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
PE++ G+ YT S D+WS G V ELL G F
Sbjct: 270 PELI------FGATDYTSSIDVWSAGCVLAELLLGQPIF 302
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 89/178 (50%), Gaps = 19/178 (10%)
Query: 70 IVNLFYSFQDMNHVYFIMEYVTGGD-FVTLLENQPHGYLSESKARFYIYELAQAVQYLHG 128
IV L S + Y + + VTGG+ F ++ + Y SE+ A I ++ +AV + H
Sbjct: 65 IVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE---YYSEADASHCIQQILEAVLHCHQ 121
Query: 129 LGYVHRDIKPDNMLLSA---TGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEW 185
+G VHRD+KP+N+LL++ +KL DFG A +V + + GTP Y++PEVL
Sbjct: 122 MGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQ-AWFGFAGTPGYLSPEVLR- 179
Query: 186 MEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPS 243
+ Y D+W+ GV+ Y LL G PF E Y I A FPS
Sbjct: 180 ------KEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKA----GAYDFPS 227
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 100/215 (46%), Gaps = 27/215 (12%)
Query: 84 YFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLL 143
Y + E + GG ++ + + H +E +A + ++A A+ +LH G HRD+KP+N+L
Sbjct: 87 YLVFEKMRGGSILSHIHKRRH--FNELEASVVVQDVASALDFLHNKGIAHRDLKPENILC 144
Query: 144 ---SATGHLKLTDFGSATQVDKNGRIKSI------VPVGTPEYVAPEVLEWMEGNHGSDG 194
+ +K+ DF + + NG I P G+ EY+APEV+E + +
Sbjct: 145 EHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAF--SEEASI 202
Query: 195 YTGSCDLWSIGVVSYELLTGSTPFNYET-LDMTYSSILACDT----------EDTVSFPS 243
Y CDLWS+GV+ Y LL+G PF D + AC E FP
Sbjct: 203 YDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPD 262
Query: 244 S--IRLSTAMVNFVQS-LVQKLDARLNMDQVLGHP 275
+S A + + LV+ RL+ QVL HP
Sbjct: 263 KDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHP 297
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 81 NHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDN 140
+ ++ +ME+ G L++N L E + E+ + + +LH +HRDIK N
Sbjct: 100 DQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQN 159
Query: 141 MLLSATGHLKLTDFGSATQVDKN-GRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSC 199
+LL+ +KL DFG + Q+D+ GR + +GTP ++APEV+ E + Y
Sbjct: 160 VLLTENAEVKLVDFGVSAQLDRTVGRRNTF--IGTPYWMAPEVIACDENPDAT--YDFKS 215
Query: 200 DLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRLSTAMVNFVQS-L 258
DLWS+G+ + E+ G+ P DM L + S + S +F++S L
Sbjct: 216 DLWSLGITAIEMAEGAPPL----CDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCL 271
Query: 259 VQKLDARLNMDQVLGHPVF 277
V+ R +Q++ HP
Sbjct: 272 VKNHSQRPATEQLMKHPFI 290
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 107/219 (48%), Gaps = 19/219 (8%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMVKSKC 67
R + VS +D + I G+FG +Y + S +KKVL+ K E IM K
Sbjct: 16 RPQEVSYTD---TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLDH 72
Query: 68 PYIVNLFYSF------QDMNHVYFIMEYVTGGDF-VTLLENQPHGYLSESKARFYIYELA 120
IV L Y F +D ++ +++YV + V ++ L + Y+Y+L
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSA-TGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVA 179
+++ Y+H G HRDIKP N+LL T LKL DFGSA Q+ + ++ + + Y A
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRYYRA 190
Query: 180 PEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
PE++ G+ YT S D+WS G V ELL G F
Sbjct: 191 PELI------FGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 89/182 (48%), Gaps = 19/182 (10%)
Query: 66 KCPYIVNLFYSFQDMNHVYFIMEYVTGGD-FVTLLENQPHGYLSESKARFYIYELAQAVQ 124
K P IV L S + Y + + VTGG+ F ++ + Y SE+ A I ++ ++V
Sbjct: 61 KHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE---YYSEADASHCIQQILESVN 117
Query: 125 YLHGLGYVHRDIKPDNMLL---SATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPE 181
+ H G VHRD+KP+N+LL S +KL DFG A +V + + GTP Y++PE
Sbjct: 118 HCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQ-AWFGFAGTPGYLSPE 176
Query: 182 VLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSF 241
VL D Y D+W+ GV+ Y LL G PF E Y I A F
Sbjct: 177 VLR-------KDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKA----GAYDF 225
Query: 242 PS 243
PS
Sbjct: 226 PS 227
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 107/219 (48%), Gaps = 19/219 (8%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMVKSKC 67
R + VS +D + I G+FG +Y + S +KKVL+ K E IM K
Sbjct: 16 RPQEVSYTD---TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLDH 72
Query: 68 PYIVNLFYSF------QDMNHVYFIMEYVTGGDF-VTLLENQPHGYLSESKARFYIYELA 120
IV L Y F +D ++ +++YV + V ++ L + Y+Y+L
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSA-TGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVA 179
+++ Y+H G HRDIKP N+LL T LKL DFGSA Q+ + ++ + + Y A
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRYYRA 190
Query: 180 PEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
PE++ G+ YT S D+WS G V ELL G F
Sbjct: 191 PELI------FGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 103/200 (51%), Gaps = 15/200 (7%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKV-LREKMPNTI---ERDIMVKSKCPYIVNLFYSFQ 78
I +G+ G + L EK S +K + LR++ + E IM + +V ++ S+
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 79 DMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKP 138
++ +ME++ GG ++ L+E + + QA+ YLH G +HRDIK
Sbjct: 113 VGEELWVLMEFLQGGALTDIVSQV---RLNEEQIATVCEAVLQALAYLHAQGVIHRDIKS 169
Query: 139 DNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGS 198
D++LL+ G +KL+DFG Q+ K+ + + VGTP ++APEV+ Y
Sbjct: 170 DSILLTLDGRVKLSDFGFCAQISKDVPKRKXL-VGTPYWMAPEVIS-------RSLYATE 221
Query: 199 CDLWSIGVVSYELLTGSTPF 218
D+WS+G++ E++ G P+
Sbjct: 222 VDIWSLGIMVIEMVDGEPPY 241
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 113/224 (50%), Gaps = 20/224 (8%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK----KVL-REKMPNTIERDI--MVKSKC 67
++ I + + +G+FG + L + +K KVL + M IER+I + +
Sbjct: 14 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH 73
Query: 68 PYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLH 127
P+I+ L+ + + + ++EY F +++ +SE +AR + ++ AV+Y H
Sbjct: 74 PHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK---MSEQEARRFFQQIISAVEYCH 130
Query: 128 GLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWME 187
VHRD+KP+N+LL ++K+ DFG + + +K+ G+P Y APEV+
Sbjct: 131 RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKT--SCGSPNYAAPEVIS--- 185
Query: 188 GNHGSDGYTGS-CDLWSIGVVSYELLTGSTPFNYETLDMTYSSI 230
Y G D+WS GV+ Y +L PF+ E++ + + +I
Sbjct: 186 ----GKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNI 225
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 84/153 (54%), Gaps = 19/153 (12%)
Query: 70 IVNLFYSFQDMNHVYFIMEYVTGG---DFVTLLENQPHGYLSESKARFYIYELAQAVQYL 126
+V ++ S+ + ++ +ME++ GG D VT H ++E + + QA+ L
Sbjct: 88 VVEMYNSYLVGDELWVVMEFLEGGALTDIVT------HTRMNEEQIAAVCLAVLQALSVL 141
Query: 127 HGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKN-GRIKSIVPVGTPEYVAPEVLEW 185
H G +HRDIK D++LL+ G +KL+DFG QV K R K + VGTP ++APE++
Sbjct: 142 HAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL--VGTPYWMAPELISR 199
Query: 186 MEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
+ Y D+WS+G++ E++ G P+
Sbjct: 200 LP-------YGPEVDIWSLGIMVIEMVDGEPPY 225
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 94/171 (54%), Gaps = 14/171 (8%)
Query: 66 KCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVT-LLENQPHGYL-SESKARFYIYELAQAV 123
K P+IV L ++ +Y + E++ G D +++ G++ SE+ A Y+ ++ +A+
Sbjct: 86 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEAL 145
Query: 124 QYLHGLGYVHRDIKPDNMLLSA---TGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAP 180
+Y H +HRD+KP +LL++ + +KL FG A Q+ ++G + VGTP ++AP
Sbjct: 146 RYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAG-GRVGTPHFMAP 204
Query: 181 EVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSIL 231
EV++ + Y D+W GV+ + LL+G PF Y T + + I+
Sbjct: 205 EVVK-------REPYGKPVDVWGCGVILFILLSGCLPF-YGTKERLFEGII 247
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 84/153 (54%), Gaps = 19/153 (12%)
Query: 70 IVNLFYSFQDMNHVYFIMEYVTGG---DFVTLLENQPHGYLSESKARFYIYELAQAVQYL 126
+V ++ S+ + ++ +ME++ GG D VT H ++E + + QA+ L
Sbjct: 90 VVEMYNSYLVGDELWVVMEFLEGGALTDIVT------HTRMNEEQIAAVCLAVLQALSVL 143
Query: 127 HGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKN-GRIKSIVPVGTPEYVAPEVLEW 185
H G +HRDIK D++LL+ G +KL+DFG QV K R K + VGTP ++APE++
Sbjct: 144 HAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL--VGTPYWMAPELISR 201
Query: 186 MEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
+ Y D+WS+G++ E++ G P+
Sbjct: 202 LP-------YGPEVDIWSLGIMVIEMVDGEPPY 227
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 113/224 (50%), Gaps = 20/224 (8%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK----KVL-REKMPNTIERDI--MVKSKC 67
++ I + + +G+FG + L + +K KVL + M IER+I + +
Sbjct: 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH 72
Query: 68 PYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLH 127
P+I+ L+ + + + ++EY F +++ +SE +AR + ++ AV+Y H
Sbjct: 73 PHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK---MSEQEARRFFQQIISAVEYCH 129
Query: 128 GLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWME 187
VHRD+KP+N+LL ++K+ DFG + + +K+ G+P Y APEV+
Sbjct: 130 RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKT--SCGSPNYAAPEVIS--- 184
Query: 188 GNHGSDGYTGS-CDLWSIGVVSYELLTGSTPFNYETLDMTYSSI 230
Y G D+WS GV+ Y +L PF+ E++ + + +I
Sbjct: 185 ----GKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNI 224
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 84/153 (54%), Gaps = 19/153 (12%)
Query: 70 IVNLFYSFQDMNHVYFIMEYVTGG---DFVTLLENQPHGYLSESKARFYIYELAQAVQYL 126
+V ++ S+ + ++ +ME++ GG D VT H ++E + + QA+ L
Sbjct: 133 VVEMYNSYLVGDELWVVMEFLEGGALTDIVT------HTRMNEEQIAAVCLAVLQALSVL 186
Query: 127 HGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKN-GRIKSIVPVGTPEYVAPEVLEW 185
H G +HRDIK D++LL+ G +KL+DFG QV K R K + VGTP ++APE++
Sbjct: 187 HAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL--VGTPYWMAPELISR 244
Query: 186 MEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
+ Y D+WS+G++ E++ G P+
Sbjct: 245 LP-------YGPEVDIWSLGIMVIEMVDGEPPY 270
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 94/171 (54%), Gaps = 14/171 (8%)
Query: 66 KCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVT-LLENQPHGYL-SESKARFYIYELAQAV 123
K P+IV L ++ +Y + E++ G D +++ G++ SE+ A Y+ ++ +A+
Sbjct: 84 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEAL 143
Query: 124 QYLHGLGYVHRDIKPDNMLLSA---TGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAP 180
+Y H +HRD+KP +LL++ + +KL FG A Q+ ++G + VGTP ++AP
Sbjct: 144 RYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAG-GRVGTPHFMAP 202
Query: 181 EVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSIL 231
EV++ + Y D+W GV+ + LL+G PF Y T + + I+
Sbjct: 203 EVVK-------REPYGKPVDVWGCGVILFILLSGCLPF-YGTKERLFEGII 245
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 77/144 (53%), Gaps = 16/144 (11%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
+ D Y +M ++ G D L++ H L E + +F +Y++ + ++Y+H G +HRD
Sbjct: 98 TLDDFTDFYLVMPFM-GTDLGKLMK---HEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRD 153
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV-LEWMEGNHGSDG 194
+KP N+ ++ LK+ DFG A Q D + V T Y APEV L WM
Sbjct: 154 LKPGNLAVNEDCELKILDFGLARQADS----EMXGXVVTRWYRAPEVILNWMR------- 202
Query: 195 YTGSCDLWSIGVVSYELLTGSTPF 218
YT + D+WS+G + E++TG T F
Sbjct: 203 YTQTVDIWSVGCIMAEMITGKTLF 226
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 113/224 (50%), Gaps = 20/224 (8%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK----KVL-REKMPNTIERDI--MVKSKC 67
++ I + + +G+FG + L + +K KVL + M IER+I + +
Sbjct: 4 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH 63
Query: 68 PYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLH 127
P+I+ L+ + + + ++EY F +++ +SE +AR + ++ AV+Y H
Sbjct: 64 PHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK---MSEQEARRFFQQIISAVEYCH 120
Query: 128 GLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWME 187
VHRD+KP+N+LL ++K+ DFG + + +K+ G+P Y APEV+
Sbjct: 121 RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKT--SCGSPNYAAPEVIS--- 175
Query: 188 GNHGSDGYTGS-CDLWSIGVVSYELLTGSTPFNYETLDMTYSSI 230
Y G D+WS GV+ Y +L PF+ E++ + + +I
Sbjct: 176 ----GKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNI 215
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 84/153 (54%), Gaps = 19/153 (12%)
Query: 70 IVNLFYSFQDMNHVYFIMEYVTGG---DFVTLLENQPHGYLSESKARFYIYELAQAVQYL 126
+V ++ S+ + ++ +ME++ GG D VT H ++E + + QA+ L
Sbjct: 79 VVEMYNSYLVGDELWVVMEFLEGGALTDIVT------HTRMNEEQIAAVCLAVLQALSVL 132
Query: 127 HGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKN-GRIKSIVPVGTPEYVAPEVLEW 185
H G +HRDIK D++LL+ G +KL+DFG QV K R K + VGTP ++APE++
Sbjct: 133 HAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL--VGTPYWMAPELISR 190
Query: 186 MEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
+ Y D+WS+G++ E++ G P+
Sbjct: 191 LP-------YGPEVDIWSLGIMVIEMVDGEPPY 216
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 113/224 (50%), Gaps = 20/224 (8%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK----KVL-REKMPNTIERDI--MVKSKC 67
++ I + + +G+FG + L + +K KVL + M IER+I + +
Sbjct: 8 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH 67
Query: 68 PYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLH 127
P+I+ L+ + + + ++EY F +++ +SE +AR + ++ AV+Y H
Sbjct: 68 PHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK---MSEQEARRFFQQIISAVEYCH 124
Query: 128 GLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWME 187
VHRD+KP+N+LL ++K+ DFG + + +K+ G+P Y APEV+
Sbjct: 125 RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKT--SCGSPNYAAPEVIS--- 179
Query: 188 GNHGSDGYTGS-CDLWSIGVVSYELLTGSTPFNYETLDMTYSSI 230
Y G D+WS GV+ Y +L PF+ E++ + + +I
Sbjct: 180 ----GKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNI 219
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 104/207 (50%), Gaps = 25/207 (12%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMVKSKCPYIVNLFYSFQDMNH 82
+ +G+FG+++ +E+KQ+ +KKV R ++ E P IV L+ + ++
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKV-RLEVFRAEELMACAGLTSPRIVPLYGAVREGPW 159
Query: 83 VYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNML 142
V ME + GG L++ Q G L E +A +Y+ + + ++YLH +H D+K DN+L
Sbjct: 160 VNIFMELLEGGSLGQLVKEQ--GCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVL 217
Query: 143 LSATG-HLKLTDFGSATQVDKNGRIKSI-----VPVGTPEYVAPEVLEWMEGNHGSDGYT 196
LS+ G H L DFG A + +G KS+ +P GT ++APEV+
Sbjct: 218 LSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIP-GTETHMAPEVV-----------LG 265
Query: 197 GSC----DLWSIGVVSYELLTGSTPFN 219
SC D+WS + +L G P+
Sbjct: 266 RSCDAKVDVWSSCCMMLHMLNGCHPWT 292
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 84/153 (54%), Gaps = 19/153 (12%)
Query: 70 IVNLFYSFQDMNHVYFIMEYVTGG---DFVTLLENQPHGYLSESKARFYIYELAQAVQYL 126
+V ++ S+ + ++ +ME++ GG D VT H ++E + + QA+ L
Sbjct: 83 VVEMYNSYLVGDELWVVMEFLEGGALTDIVT------HTRMNEEQIAAVCLAVLQALSVL 136
Query: 127 HGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKN-GRIKSIVPVGTPEYVAPEVLEW 185
H G +HRDIK D++LL+ G +KL+DFG QV K R K + VGTP ++APE++
Sbjct: 137 HAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL--VGTPYWMAPELISR 194
Query: 186 MEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
+ Y D+WS+G++ E++ G P+
Sbjct: 195 LP-------YGPEVDIWSLGIMVIEMVDGEPPY 220
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 83/157 (52%), Gaps = 20/157 (12%)
Query: 70 IVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYL--SESKARFYIYELAQAVQYLH 127
IV SF + + ME V GG LL ++ G L +E FY ++ + ++YLH
Sbjct: 81 IVQYLGSFSENGFIKIFMEQVPGGSLSALLRSK-WGPLKDNEQTIGFYTKQILEGLKYLH 139
Query: 128 GLGYVHRDIKPDNMLLSA-TGHLKLTDFGSATQVDKNGRIKSIVPV-----GTPEYVAPE 181
VHRDIK DN+L++ +G LK++DFG++ R+ I P GT +Y+APE
Sbjct: 140 DNQIVHRDIKGDNVLINTYSGVLKISDFGTSK------RLAGINPCTETFTGTLQYMAPE 193
Query: 182 VLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
++ + G GY + D+WS+G E+ TG PF
Sbjct: 194 II-----DKGPRGYGKAADIWSLGCTIIEMATGKPPF 225
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 101/205 (49%), Gaps = 18/205 (8%)
Query: 26 GNFGDIYLVEEKQSHNTFVMKKVL-----REKMPNTIERDIMVKSKCPY--IVNLFYSFQ 78
G +YL E+ + +K + +E+ ER++ S+ + IV++ +
Sbjct: 22 GGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDE 81
Query: 79 DMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKP 138
+ + Y +MEY+ G +E+ HG LS A + ++ +++ H + VHRDIKP
Sbjct: 82 EDDCYYLVMEYIEGPTLSEYIES--HGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKP 139
Query: 139 DNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGS 198
N+L+ + LK+ DFG A + + ++ +GT +Y +PE T
Sbjct: 140 QNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPE--------QAKGEATDE 191
Query: 199 C-DLWSIGVVSYELLTGSTPFNYET 222
C D++SIG+V YE+L G PFN ET
Sbjct: 192 CTDIYSIGIVLYEMLVGEPPFNGET 216
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 109/215 (50%), Gaps = 27/215 (12%)
Query: 21 RFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMVKSKCPYIVNL---FYSF 77
+ I G+FG ++ + +S + +KKVL++K E IM K P +V+L FYS
Sbjct: 46 KVIGNGSFGVVFQAKLVES-DEVAIKKVLQDKRFKNRELQIMRIVKHPNVVDLKAFFYSN 104
Query: 78 QDMNHVYF---IMEYV------TGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHG 128
D F ++EYV + L + P + + Y+Y+L +++ Y+H
Sbjct: 105 GDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLI-----KLYMYQLLRSLAYIHS 159
Query: 129 LGYVHRDIKPDNMLL-SATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWME 187
+G HRDIKP N+LL +G LKL DFGSA ++ G ++ + + Y APE++
Sbjct: 160 IGICHRDIKPQNLLLDPPSGVLKLIDFGSA-KILIAGE-PNVSXICSRYYRAPELI---- 213
Query: 188 GNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYET 222
G+ YT + D+WS G V EL+ G F E+
Sbjct: 214 --FGATNYTTNIDIWSTGCVMAELMQGQPLFPGES 246
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 85/157 (54%), Gaps = 18/157 (11%)
Query: 68 PYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLEN-QPHGYLSESKARFYIYELAQAVQYL 126
P IV L+ + +N V +MEY GG +L +P Y + + A + + +Q V YL
Sbjct: 61 PNIVKLYGAC--LNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYL 118
Query: 127 HGL---GYVHRDIKPDNMLLSATGH-LKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV 182
H + +HRD+KP N+LL A G LK+ DFG+A + + G+ ++APEV
Sbjct: 119 HSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK----GSAAWMAPEV 174
Query: 183 LEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFN 219
E GS+ Y+ CD++S G++ +E++T PF+
Sbjct: 175 FE------GSN-YSEKCDVFSWGIILWEVITRRKPFD 204
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 85/157 (54%), Gaps = 18/157 (11%)
Query: 68 PYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLEN-QPHGYLSESKARFYIYELAQAVQYL 126
P IV L+ + +N V +MEY GG +L +P Y + + A + + +Q V YL
Sbjct: 62 PNIVKLYGAC--LNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYL 119
Query: 127 HGL---GYVHRDIKPDNMLLSATGH-LKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV 182
H + +HRD+KP N+LL A G LK+ DFG+A + + G+ ++APEV
Sbjct: 120 HSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK----GSAAWMAPEV 175
Query: 183 LEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFN 219
E GS+ Y+ CD++S G++ +E++T PF+
Sbjct: 176 FE------GSN-YSEKCDVFSWGIILWEVITRRKPFD 205
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 103/207 (49%), Gaps = 25/207 (12%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMVKSKCPYIVNLFYSFQDMNH 82
+ +G+FG+++ +E+KQ+ +KKV R ++ E P IV L+ + ++
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKV-RLEVFRAEELMACAGLTSPRIVPLYGAVREGPW 140
Query: 83 VYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNML 142
V ME + GG L++ Q G L E +A +Y+ + + ++YLH +H D+K DN+L
Sbjct: 141 VNIFMELLEGGSLGQLVKEQ--GCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVL 198
Query: 143 LSATG-HLKLTDFGSATQVDKNGRIKSI-----VPVGTPEYVAPEVLEWMEGNHGSDGYT 196
LS+ G H L DFG A + +G K + +P GT ++APEV+
Sbjct: 199 LSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIP-GTETHMAPEVV-----------LG 246
Query: 197 GSC----DLWSIGVVSYELLTGSTPFN 219
SC D+WS + +L G P+
Sbjct: 247 RSCDAKVDVWSSCCMMLHMLNGCHPWT 273
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 131/312 (41%), Gaps = 60/312 (19%)
Query: 17 FDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKV----LREKMPNTIER-----DIMVKSKC 67
+ +K I QG++G + + E Q+ +K + +R+ P +ER +M K
Sbjct: 28 YHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHH 87
Query: 68 PYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLE--------------------------- 100
P I L+ ++D ++ +ME GG + L
Sbjct: 88 PNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNE 147
Query: 101 ----NQPHGYL-------SESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSA--TG 147
HG+ E + ++ A+ YLH G HRDIKP+N L S +
Sbjct: 148 EAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSF 207
Query: 148 HLKLTDFGSATQVDK--NGRIKSIVP-VGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSI 204
+KL DFG + + K NG + GTP +VAPEVL N ++ Y CD WS
Sbjct: 208 EIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVL-----NTTNESYGPKCDAWSA 262
Query: 205 GVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRLSTAMVNFVQSLVQK-LD 263
GV+ + LL G+ PF T S +L + + P+ LS + + +L+ + +D
Sbjct: 263 GVLLHLLLMGAVPFPGVNDADTISQVL--NKKLCFENPNYNVLSPLARDLLSNLLNRNVD 320
Query: 264 ARLNMDQVLGHP 275
R + + L HP
Sbjct: 321 ERFDAMRALQHP 332
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 83/157 (52%), Gaps = 20/157 (12%)
Query: 70 IVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYL--SESKARFYIYELAQAVQYLH 127
IV SF + + ME V GG LL ++ G L +E FY ++ + ++YLH
Sbjct: 67 IVQYLGSFSENGFIKIFMEQVPGGSLSALLRSK-WGPLKDNEQTIGFYTKQILEGLKYLH 125
Query: 128 GLGYVHRDIKPDNMLLSA-TGHLKLTDFGSATQVDKNGRIKSIVPV-----GTPEYVAPE 181
VHRDIK DN+L++ +G LK++DFG++ R+ I P GT +Y+APE
Sbjct: 126 DNQIVHRDIKGDNVLINTYSGVLKISDFGTSK------RLAGINPCTETFTGTLQYMAPE 179
Query: 182 VLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
+++ G GY + D+WS+G E+ TG PF
Sbjct: 180 IID-----KGPRGYGKAADIWSLGCTIIEMATGKPPF 211
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 77/143 (53%), Gaps = 11/143 (7%)
Query: 84 YFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLL 143
Y +MEYV G ++ + G ++ +A I + QA+ + H G +HRD+KP N+++
Sbjct: 92 YIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMI 149
Query: 144 SATGHLKLTDFGSATQVDKNGR--IKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDL 201
SAT +K+ DFG A + +G ++ +GT +Y++PE D D+
Sbjct: 150 SATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR-------GDSVDARSDV 202
Query: 202 WSIGVVSYELLTGSTPFNYETLD 224
+S+G V YE+LTG PF ++ D
Sbjct: 203 YSLGCVLYEVLTGEPPFTGDSPD 225
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 116/268 (43%), Gaps = 26/268 (9%)
Query: 4 VKELRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVL------REKMPNTI 57
V EL K+ F R I G+FG +Y + ++ +KK+ EK + I
Sbjct: 4 VAELFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDII 63
Query: 58 -ERDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTL-LENQPHGYLSESKARFY 115
E + K + P + + + + +MEY G L + +P L E +
Sbjct: 64 KEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKP---LQEVEIAAV 120
Query: 116 IYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTP 175
+ Q + YLH +HRD+K N+LLS G +KL DFGSA+ + VGTP
Sbjct: 121 THGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXF-----VGTP 175
Query: 176 EYVAPEVLEWM-EGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACD 234
++APEV+ M EG Y G D+WS+G+ EL P +M S L
Sbjct: 176 YWMAPEVILAMDEGQ-----YDGKVDVWSLGITCIELAERKPPL----FNMNAMSALYHI 226
Query: 235 TEDTVSFPSSIRLSTAMVNFVQSLVQKL 262
++ S S NFV S +QK+
Sbjct: 227 AQNESPALQSGHWSEYFRNFVDSCLQKI 254
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 116/268 (43%), Gaps = 26/268 (9%)
Query: 4 VKELRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVL------REKMPNTI 57
V EL K+ F R I G+FG +Y + ++ +KK+ EK + I
Sbjct: 43 VAELFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDII 102
Query: 58 -ERDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTL-LENQPHGYLSESKARFY 115
E + K + P + + + + +MEY G L + +P L E +
Sbjct: 103 KEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKP---LQEVEIAAV 159
Query: 116 IYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTP 175
+ Q + YLH +HRD+K N+LLS G +KL DFGSA+ + VGTP
Sbjct: 160 THGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXF-----VGTP 214
Query: 176 EYVAPEVLEWM-EGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACD 234
++APEV+ M EG Y G D+WS+G+ EL P +M S L
Sbjct: 215 YWMAPEVILAMDEGQ-----YDGKVDVWSLGITCIELAERKPPL----FNMNAMSALYHI 265
Query: 235 TEDTVSFPSSIRLSTAMVNFVQSLVQKL 262
++ S S NFV S +QK+
Sbjct: 266 AQNESPALQSGHWSEYFRNFVDSCLQKI 293
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 76/141 (53%), Gaps = 11/141 (7%)
Query: 84 YFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLL 143
Y +MEYV G ++ + G ++ +A I + QA+ + H G +HRD+KP N+L+
Sbjct: 92 YIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANILI 149
Query: 144 SATGHLKLTDFGSATQVDKNGR--IKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDL 201
SAT +K+ DFG A + +G ++ +GT +Y++PE D D+
Sbjct: 150 SATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQAR-------GDSVDARSDV 202
Query: 202 WSIGVVSYELLTGSTPFNYET 222
+S+G V YE+LTG PF ++
Sbjct: 203 YSLGCVLYEVLTGEPPFTGDS 223
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 129/284 (45%), Gaps = 46/284 (16%)
Query: 17 FDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIE-----RDIMVKSKCP--- 68
+++ + + +G +G ++ ++++ +KK+ + N+ + R+IM+ ++
Sbjct: 11 YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIF-DAFQNSTDAQRTFREIMILTELSGHE 69
Query: 69 YIVNLFYSFQDMNH--VYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYL 126
IVNL + N VY + +Y+ + N L ++ +Y+L + ++YL
Sbjct: 70 NIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRAN----ILEPVHKQYVVYQLIKVIKYL 125
Query: 127 HGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVP--------------- 171
H G +HRD+KP N+LL+A H+K+ DFG + R+ + +P
Sbjct: 126 HSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQP 185
Query: 172 -----VGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMT 226
V T Y APE+L GS YT D+WS+G + E+L G F +
Sbjct: 186 ILTDYVATRWYRAPEILL------GSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQ 239
Query: 227 YSSILACDTEDTVSFPSSIRLSTAMVNFVQSLVQKLDARLNMDQ 270
I+ + FPS+ + + F +++++ L ++ + Q
Sbjct: 240 LERIIG-----VIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQ 278
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 90/176 (51%), Gaps = 21/176 (11%)
Query: 45 MKKVLREKMPNTIERDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPH 104
+K +LR + N I + ++++ + + M VY + ++ G D LL+ Q
Sbjct: 92 IKILLRFRHENIIGINDIIRAP---------TIEQMKDVYLV-THLMGADLYKLLKTQ-- 139
Query: 105 GYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNG 164
+LS +++Y++ + ++Y+H +HRD+KP N+LL+ T LK+ DFG A D +
Sbjct: 140 -HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDH 198
Query: 165 RIKSIVP--VGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
+ V T Y APE++ S GYT S D+WS+G + E+L+ F
Sbjct: 199 DHTGFLTEYVATRWYRAPEIML------NSKGYTKSIDIWSVGCILAEMLSNRPIF 248
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 77/144 (53%), Gaps = 16/144 (11%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
S +D + VY + + G D ++++Q LS+ +F +Y+L + ++Y+H G +HRD
Sbjct: 101 SIEDFSEVYLVTT-LMGADLNNIVKSQA---LSDEHVQFLVYQLLRGLKYIHSAGIIHRD 156
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV-LEWMEGNHGSDG 194
+KP N+ ++ L++ DFG A Q D+ + V T Y APE+ L WM
Sbjct: 157 LKPSNVAVNEDSELRILDFGLARQADE----EMTGYVATRWYRAPEIMLNWMH------- 205
Query: 195 YTGSCDLWSIGVVSYELLTGSTPF 218
Y + D+WS+G + ELL G F
Sbjct: 206 YNQTVDIWSVGCIMAELLQGKALF 229
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 125/264 (47%), Gaps = 14/264 (5%)
Query: 26 GNFGDIYLVEEKQSHNTFVMKKVLREKMPN-----TIERDIMVKSKCPYIVNLFYSFQDM 80
G FG +Y + K++ KV+ K +E +I+ PYIV L ++
Sbjct: 30 GAFGKVYKAKNKET-GALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHD 88
Query: 81 NHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDN 140
++ ++E+ GG ++ G L+E + + ++ +A+ +LH +HRD+K N
Sbjct: 89 GKLWIMIEFCPGGAVDAIMLELDRG-LTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGN 147
Query: 141 MLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCD 200
+L++ G ++L DFG + + K + + +GTP ++APEV+ M Y D
Sbjct: 148 VLMTLEGDIRLADFGVSAKNLKTLQKRDSF-IGTPYWMAPEVV--MCETMKDTPYDYKAD 204
Query: 201 LWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRLSTAMVNFVQ-SLV 259
+WS+G+ E+ P ++E M +A T+ PS + S +F++ +L
Sbjct: 205 IWSLGITLIEMAQIEPP-HHELNPMRVLLKIAKSDPPTLLTPS--KWSVEFRDFLKIALD 261
Query: 260 QKLDARLNMDQVLGHPVFDCLDSD 283
+ + R + Q+L HP + S+
Sbjct: 262 KNPETRPSAAQLLEHPFVSSITSN 285
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 74/137 (54%), Gaps = 11/137 (8%)
Query: 84 YFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLL 143
Y +MEYV G ++ + G ++ +A I + QA+ + H G +HRD+KP N+++
Sbjct: 92 YIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMI 149
Query: 144 SATGHLKLTDFGSATQVDKNGR--IKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDL 201
SAT +K+ DFG A + +G ++ +GT +Y++PE D D+
Sbjct: 150 SATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR-------GDSVDARSDV 202
Query: 202 WSIGVVSYELLTGSTPF 218
+S+G V YE+LTG PF
Sbjct: 203 YSLGCVLYEVLTGEPPF 219
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 76/141 (53%), Gaps = 11/141 (7%)
Query: 84 YFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLL 143
Y +MEYV G ++ + G ++ +A I + QA+ + H G +HRD+KP N+++
Sbjct: 92 YIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMI 149
Query: 144 SATGHLKLTDFGSATQVDKNGR--IKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDL 201
SAT +K+ DFG A + +G ++ +GT +Y++PE D D+
Sbjct: 150 SATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR-------GDSVDARSDV 202
Query: 202 WSIGVVSYELLTGSTPFNYET 222
+S+G V YE+LTG PF ++
Sbjct: 203 YSLGCVLYEVLTGEPPFTGDS 223
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 74/137 (54%), Gaps = 11/137 (8%)
Query: 84 YFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLL 143
Y +MEYV G ++ + G ++ +A I + QA+ + H G +HRD+KP N+++
Sbjct: 92 YIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMI 149
Query: 144 SATGHLKLTDFGSATQVDKNGR--IKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDL 201
SAT +K+ DFG A + +G ++ +GT +Y++PE D D+
Sbjct: 150 SATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR-------GDSVDARSDV 202
Query: 202 WSIGVVSYELLTGSTPF 218
+S+G V YE+LTG PF
Sbjct: 203 YSLGCVLYEVLTGEPPF 219
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 103/221 (46%), Gaps = 44/221 (19%)
Query: 9 QKNVSASDFDI-KRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMV---K 64
+KN D+ + + + G G + + K++ F +K + + P R++ +
Sbjct: 11 KKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALK--MLQDCPKA-RREVELHWRA 67
Query: 65 SKCPYIVNLFYSFQDM----NHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELA 120
S+CP+IV + ++++ + +ME + GG+ + ++++ +E +A + +
Sbjct: 68 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 127
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSA---TGHLKLTDFGSATQVDKNGRIKSIVPVGTPEY 177
+A+QYLH + HRD+KP+N+L ++ LKLTDFG A +
Sbjct: 128 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT---------------- 171
Query: 178 VAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
+ Y SCD+WS+GV+ Y LL G PF
Sbjct: 172 --------------GEKYDKSCDMWSLGVIMYILLCGYPPF 198
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 16/144 (11%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
S +D + VY + + G D +++ Q LS+ +F +Y+L + ++Y+H G +HRD
Sbjct: 101 SIEDFSEVYLVTT-LMGADLNNIVKCQA---LSDEHVQFLVYQLLRGLKYIHSAGIIHRD 156
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV-LEWMEGNHGSDG 194
+KP N+ ++ L++ DFG A Q D+ + V T Y APE+ L WM
Sbjct: 157 LKPSNVAVNEDSELRILDFGLARQADE----EMTGYVATRWYRAPEIMLNWMH------- 205
Query: 195 YTGSCDLWSIGVVSYELLTGSTPF 218
Y + D+WS+G + ELL G F
Sbjct: 206 YNQTVDIWSVGCIMAELLQGKALF 229
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 114/249 (45%), Gaps = 21/249 (8%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVLR-----EKMPNTIERDIMVKSK-CPYIVNLFYS 76
+ G G ++ + +++ + +K++ R E ++ D+++KS CPYIV F +
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGT 92
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYL---HGLGYVH 133
F V+ ME + G L+ + G + E + +A+ YL HG+ +H
Sbjct: 93 FITNTDVFIAMELM--GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGV--IH 148
Query: 134 RDIKPDNMLLSATGHLKLTDFG-SATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGS 192
RD+KP N+LL G +KL DFG S VD + +S G Y+APE ++ +
Sbjct: 149 RDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRS---AGCAAYMAPERID--PPDPTK 203
Query: 193 DGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRLSTAMV 252
Y D+WS+G+ EL TG P Y+ + + E+ P + S
Sbjct: 204 PDYDIRADVWSLGISLVELATGQFP--YKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQ 261
Query: 253 NFVQSLVQK 261
+FV+ + K
Sbjct: 262 SFVKDCLTK 270
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 125/264 (47%), Gaps = 14/264 (5%)
Query: 26 GNFGDIYLVEEKQSHNTFVMKKVLREKMPN-----TIERDIMVKSKCPYIVNLFYSFQDM 80
G FG +Y + K++ KV+ K +E +I+ PYIV L ++
Sbjct: 22 GAFGKVYKAKNKET-GALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHD 80
Query: 81 NHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDN 140
++ ++E+ GG ++ G L+E + + ++ +A+ +LH +HRD+K N
Sbjct: 81 GKLWIMIEFCPGGAVDAIMLELDRG-LTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGN 139
Query: 141 MLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCD 200
+L++ G ++L DFG + + K + + +GTP ++APEV+ M Y D
Sbjct: 140 VLMTLEGDIRLADFGVSAKNLKTLQKRDSF-IGTPYWMAPEVV--MCETMKDTPYDYKAD 196
Query: 201 LWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRLSTAMVNFVQ-SLV 259
+WS+G+ E+ P ++E M +A T+ PS + S +F++ +L
Sbjct: 197 IWSLGITLIEMAQIEPP-HHELNPMRVLLKIAKSDPPTLLTPS--KWSVEFRDFLKIALD 253
Query: 260 QKLDARLNMDQVLGHPVFDCLDSD 283
+ + R + Q+L HP + S+
Sbjct: 254 KNPETRPSAAQLLEHPFVSSITSN 277
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 101/203 (49%), Gaps = 18/203 (8%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVLR-----EKMPNTIERDIMVKSKC--PYIVNLFY 75
+ +G +G +Y + K S V K +R E +P+T R+I + + P IV+L
Sbjct: 29 VGEGTYGVVY--KAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
+ + E++ D +L+ G L +S+ + Y+Y+L + V + H +HRD
Sbjct: 87 VIHSERCLTLVFEFMEK-DLKKVLDENKTG-LQDSQIKIYLYQLLRGVAHCHQHRILHRD 144
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGY 195
+KP N+L+++ G LKL DFG A R V T Y AP+VL GS Y
Sbjct: 145 LKPQNLLINSDGALKLADFGLARAFGIPVR-SYTHEVVTLWYRAPDVL------MGSKKY 197
Query: 196 TGSCDLWSIGVVSYELLTGSTPF 218
+ S D+WSIG + E++TG F
Sbjct: 198 STSVDIWSIGCIFAEMITGKPLF 220
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 16/144 (11%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
S +D + VY + + G D +++ Q LS+ +F +Y+L + ++Y+H G +HRD
Sbjct: 93 SIEDFSEVYLVTT-LMGADLNNIVKCQA---LSDEHVQFLVYQLLRGLKYIHSAGIIHRD 148
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV-LEWMEGNHGSDG 194
+KP N+ ++ L++ DFG A Q D+ + V T Y APE+ L WM
Sbjct: 149 LKPSNVAVNEDCELRILDFGLARQADE----EMTGYVATRWYRAPEIMLNWMH------- 197
Query: 195 YTGSCDLWSIGVVSYELLTGSTPF 218
Y + D+WS+G + ELL G F
Sbjct: 198 YNQTVDIWSVGCIMAELLQGKALF 221
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 16/144 (11%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
S ++ N VY + ++ G D +++ Q L++ +F IY++ + ++Y+H +HRD
Sbjct: 95 SLEEFNDVYLV-THLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRD 150
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV-LEWMEGNHGSDG 194
+KP N+ ++ LK+ DFG A D + V T Y APE+ L WM
Sbjct: 151 LKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH------- 199
Query: 195 YTGSCDLWSIGVVSYELLTGSTPF 218
Y + D+WS+G + ELLTG T F
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 16/144 (11%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
S ++ N VY + ++ G D +++ Q L++ +F IY++ + ++Y+H +HRD
Sbjct: 95 SLEEFNDVYLV-THLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRD 150
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV-LEWMEGNHGSDG 194
+KP N+ ++ LK+ DFG A D + V T Y APE+ L WM
Sbjct: 151 LKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH------- 199
Query: 195 YTGSCDLWSIGVVSYELLTGSTPF 218
Y + D+WS+G + ELLTG T F
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 101/203 (49%), Gaps = 18/203 (8%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVLR-----EKMPNTIERDIMVKSKC--PYIVNLFY 75
+ +G +G +Y + K S V K +R E +P+T R+I + + P IV+L
Sbjct: 29 VGEGTYGVVY--KAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
+ + E++ D +L+ G L +S+ + Y+Y+L + V + H +HRD
Sbjct: 87 VIHSERCLTLVFEFMEK-DLKKVLDENKTG-LQDSQIKIYLYQLLRGVAHCHQHRILHRD 144
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGY 195
+KP N+L+++ G LKL DFG A R V T Y AP+VL GS Y
Sbjct: 145 LKPQNLLINSDGALKLADFGLARAFGIPVR-SYTHEVVTLWYRAPDVL------MGSKKY 197
Query: 196 TGSCDLWSIGVVSYELLTGSTPF 218
+ S D+WSIG + E++TG F
Sbjct: 198 STSVDIWSIGCIFAEMITGKPLF 220
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 125/271 (46%), Gaps = 29/271 (10%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP---NTIERDIMVKSKC--PYI 70
DF+ + GN G ++ V K S K + E P N I R++ V +C PYI
Sbjct: 26 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 85
Query: 71 VNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYL---H 127
V + +F + ME++ GG +L+ G + E + + + YL H
Sbjct: 86 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKH 143
Query: 128 GLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVP--VGTPEYVAPEVLEW 185
+ +HRD+KP N+L+++ G +KL DFG + Q+ I S+ VGT Y++PE L
Sbjct: 144 KI--MHRDVKPSNILVNSRGEIKLCDFGVSGQL-----IDSMANSFVGTRSYMSPERL-- 194
Query: 186 MEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSIL-ACDTEDTVSFPSS 244
+G H Y+ D+WS+G+ E+ G P + M +L E PS
Sbjct: 195 -QGTH----YSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPSG 249
Query: 245 IRLSTAMVNFV-QSLVQKLDARLNMDQVLGH 274
+ S +FV + L++ R ++ Q++ H
Sbjct: 250 V-FSLEFQDFVNKCLIKNPAERADLKQLMVH 279
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 16/144 (11%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
S ++ N VY + ++ G D +++ Q L++ +F IY++ + ++Y+H +HRD
Sbjct: 95 SLEEFNDVYLV-THLMGADLNNIVKXQK---LTDDHVQFLIYQILRGLKYIHSADIIHRD 150
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV-LEWMEGNHGSDG 194
+KP N+ ++ LK+ DFG A D + V T Y APE+ L WM
Sbjct: 151 LKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH------- 199
Query: 195 YTGSCDLWSIGVVSYELLTGSTPF 218
Y + D+WS+G + ELLTG T F
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 16/144 (11%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
S ++ N VY + ++ G D +++ Q L++ +F IY++ + ++Y+H +HRD
Sbjct: 95 SLEEFNDVYLV-THLMGADLNNIVKXQK---LTDDHVQFLIYQILRGLKYIHSADIIHRD 150
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV-LEWMEGNHGSDG 194
+KP N+ ++ LK+ DFG A D + V T Y APE+ L WM
Sbjct: 151 LKPSNLAVNEDXELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH------- 199
Query: 195 YTGSCDLWSIGVVSYELLTGSTPF 218
Y + D+WS+G + ELLTG T F
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 74/137 (54%), Gaps = 11/137 (8%)
Query: 84 YFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLL 143
Y +MEYV G ++ + G ++ +A I + QA+ + H G +HRD+KP N+++
Sbjct: 109 YIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMI 166
Query: 144 SATGHLKLTDFGSATQVDKNGR--IKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDL 201
SAT +K+ DFG A + +G ++ +GT +Y++PE D D+
Sbjct: 167 SATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR-------GDSVDARSDV 219
Query: 202 WSIGVVSYELLTGSTPF 218
+S+G V YE+LTG PF
Sbjct: 220 YSLGCVLYEVLTGEPPF 236
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 16/144 (11%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
S ++ N VY + ++ G D +++ Q L++ +F IY++ + ++Y+H +HRD
Sbjct: 101 SLEEFNDVYLV-THLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRD 156
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV-LEWMEGNHGSDG 194
+KP N+ ++ LK+ DFG A D + V T Y APE+ L WM
Sbjct: 157 LKPSNLAVNEDSELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH------- 205
Query: 195 YTGSCDLWSIGVVSYELLTGSTPF 218
Y + D+WS+G + ELLTG T F
Sbjct: 206 YNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 16/144 (11%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
S ++ N VY + ++ G D +++ Q L++ +F IY++ + ++Y+H +HRD
Sbjct: 95 SLEEFNDVYLV-THLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRD 150
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV-LEWMEGNHGSDG 194
+KP N+ ++ LK+ DFG A D + V T Y APE+ L WM
Sbjct: 151 LKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH------- 199
Query: 195 YTGSCDLWSIGVVSYELLTGSTPF 218
Y + D+WS+G + ELLTG T F
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 16/144 (11%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
S ++ N VY + ++ G D +++ Q L++ +F IY++ + ++Y+H +HRD
Sbjct: 97 SLEEFNDVYLV-THLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRD 152
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV-LEWMEGNHGSDG 194
+KP N+ ++ LK+ DFG A D + V T Y APE+ L WM
Sbjct: 153 LKPSNLAVNEDSELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH------- 201
Query: 195 YTGSCDLWSIGVVSYELLTGSTPF 218
Y + D+WS+G + ELLTG T F
Sbjct: 202 YNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 16/144 (11%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
S ++ N VY + ++ G D +++ Q L++ +F IY++ + ++Y+H +HRD
Sbjct: 95 SLEEFNDVYLV-THLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRD 150
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV-LEWMEGNHGSDG 194
+KP N+ ++ LK+ DFG A D + V T Y APE+ L WM
Sbjct: 151 LKPSNLAVNEDCELKILDFGLARHTDD----EMTGXVATRWYRAPEIMLNWMH------- 199
Query: 195 YTGSCDLWSIGVVSYELLTGSTPF 218
Y + D+WS+G + ELLTG T F
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 112/239 (46%), Gaps = 20/239 (8%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKV-------LREKMPNTIERDIMVKSKC 67
++F I++ I +G F ++Y +KKV + + E D++ +
Sbjct: 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH 91
Query: 68 PYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLEN--QPHGYLSESKARFYIYELAQAVQY 125
P ++ + SF + N + ++E GD ++++ + + E Y +L A+++
Sbjct: 92 PNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEH 151
Query: 126 LHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQV-DKNGRIKSIVPVGTPEYVAPEVLE 184
+H +HRDIKP N+ ++ATG +KL D G K S+ VGTP Y++PE +
Sbjct: 152 MHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSL--VGTPYYMSPERIH 209
Query: 185 WMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPS 243
+GY D+WS+G + YE+ +PF + +++ YS + D PS
Sbjct: 210 -------ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL-YSLCKKIEQCDYPPLPS 260
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 16/144 (11%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
S ++ N VY + ++ G D +++ Q L++ +F IY++ + ++Y+H +HRD
Sbjct: 95 SLEEFNDVYLV-THLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRD 150
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV-LEWMEGNHGSDG 194
+KP N+ ++ LK+ DFG A D + V T Y APE+ L WM
Sbjct: 151 LKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH------- 199
Query: 195 YTGSCDLWSIGVVSYELLTGSTPF 218
Y + D+WS+G + ELLTG T F
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 16/144 (11%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
S ++ N VY + ++ G D +++ Q L++ +F IY++ + ++Y+H +HRD
Sbjct: 95 SLEEFNDVYLV-THLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRD 150
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV-LEWMEGNHGSDG 194
+KP N+ ++ LK+ DFG A D + V T Y APE+ L WM
Sbjct: 151 LKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH------- 199
Query: 195 YTGSCDLWSIGVVSYELLTGSTPF 218
Y + D+WS+G + ELLTG T F
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 16/144 (11%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
S ++ N VY + ++ G D +++ Q L++ +F IY++ + ++Y+H +HRD
Sbjct: 115 SLEEFNDVYLV-THLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRD 170
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV-LEWMEGNHGSDG 194
+KP N+ ++ LK+ DFG A D + V T Y APE+ L WM
Sbjct: 171 LKPSNLAVNEDCELKILDFGLARHTDD----EMXGXVATRWYRAPEIMLNWMH------- 219
Query: 195 YTGSCDLWSIGVVSYELLTGSTPF 218
Y + D+WS+G + ELLTG T F
Sbjct: 220 YNQTVDIWSVGCIMAELLTGRTLF 243
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 16/144 (11%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
S ++ N VY + ++ G D +++ Q L++ +F IY++ + ++Y+H +HRD
Sbjct: 102 SLEEFNDVYLV-THLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRD 157
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV-LEWMEGNHGSDG 194
+KP N+ ++ LK+ DFG A D + V T Y APE+ L WM
Sbjct: 158 LKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH------- 206
Query: 195 YTGSCDLWSIGVVSYELLTGSTPF 218
Y + D+WS+G + ELLTG T F
Sbjct: 207 YNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 16/144 (11%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
S ++ N VY + ++ G D +++ Q L++ +F IY++ + ++Y+H +HRD
Sbjct: 100 SLEEFNDVYLV-THLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRD 155
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV-LEWMEGNHGSDG 194
+KP N+ ++ LK+ DFG A D + V T Y APE+ L WM
Sbjct: 156 LKPSNLAVNEDXELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH------- 204
Query: 195 YTGSCDLWSIGVVSYELLTGSTPF 218
Y + D+WS+G + ELLTG T F
Sbjct: 205 YNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 16/144 (11%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
S ++ N VY + ++ G D +++ Q L++ +F IY++ + ++Y+H +HRD
Sbjct: 100 SLEEFNDVYLV-THLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRD 155
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV-LEWMEGNHGSDG 194
+KP N+ ++ LK+ DFG A D + V T Y APE+ L WM
Sbjct: 156 LKPSNLAVNEDXELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH------- 204
Query: 195 YTGSCDLWSIGVVSYELLTGSTPF 218
Y + D+WS+G + ELLTG T F
Sbjct: 205 YNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 16/144 (11%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
S ++ N VY + ++ G D +++ Q L++ +F IY++ + ++Y+H +HRD
Sbjct: 97 SLEEFNDVYLV-THLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRD 152
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV-LEWMEGNHGSDG 194
+KP N+ ++ LK+ DFG A D + V T Y APE+ L WM
Sbjct: 153 LKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH------- 201
Query: 195 YTGSCDLWSIGVVSYELLTGSTPF 218
Y + D+WS+G + ELLTG T F
Sbjct: 202 YNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 16/144 (11%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
S ++ N VY + ++ G D +++ Q L++ +F IY++ + ++Y+H +HRD
Sbjct: 100 SLEEFNDVYLV-THLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRD 155
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV-LEWMEGNHGSDG 194
+KP N+ ++ LK+ DFG A D + V T Y APE+ L WM
Sbjct: 156 LKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH------- 204
Query: 195 YTGSCDLWSIGVVSYELLTGSTPF 218
Y + D+WS+G + ELLTG T F
Sbjct: 205 YNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 16/144 (11%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
S ++ N VY + ++ G D +++ Q L++ +F IY++ + ++Y+H +HRD
Sbjct: 94 SLEEFNDVYLV-THLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRD 149
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV-LEWMEGNHGSDG 194
+KP N+ ++ LK+ DFG A D + V T Y APE+ L WM
Sbjct: 150 LKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH------- 198
Query: 195 YTGSCDLWSIGVVSYELLTGSTPF 218
Y + D+WS+G + ELLTG T F
Sbjct: 199 YNQTVDIWSVGCIMAELLTGRTLF 222
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 16/144 (11%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
S ++ N VY + ++ G D +++ Q L++ +F IY++ + ++Y+H +HRD
Sbjct: 101 SLEEFNDVYLV-THLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRD 156
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV-LEWMEGNHGSDG 194
+KP N+ ++ LK+ DFG A D + V T Y APE+ L WM
Sbjct: 157 LKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH------- 205
Query: 195 YTGSCDLWSIGVVSYELLTGSTPF 218
Y + D+WS+G + ELLTG T F
Sbjct: 206 YNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 16/144 (11%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
S ++ N VY + ++ G D +++ Q L++ +F IY++ + ++Y+H +HRD
Sbjct: 107 SLEEFNDVYLV-THLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRD 162
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV-LEWMEGNHGSDG 194
+KP N+ ++ LK+ DFG A D + V T Y APE+ L WM
Sbjct: 163 LKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH------- 211
Query: 195 YTGSCDLWSIGVVSYELLTGSTPF 218
Y + D+WS+G + ELLTG T F
Sbjct: 212 YNQTVDIWSVGCIMAELLTGRTLF 235
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 16/144 (11%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
S ++ N VY + ++ G D +++ Q L++ +F IY++ + ++Y+H +HRD
Sbjct: 101 SLEEFNDVYLV-THLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRD 156
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV-LEWMEGNHGSDG 194
+KP N+ ++ LK+ DFG A D + V T Y APE+ L WM
Sbjct: 157 LKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH------- 205
Query: 195 YTGSCDLWSIGVVSYELLTGSTPF 218
Y + D+WS+G + ELLTG T F
Sbjct: 206 YNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 16/144 (11%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
S ++ N VY + ++ G D +++ Q L++ +F IY++ + ++Y+H +HRD
Sbjct: 106 SLEEFNDVYLV-THLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRD 161
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV-LEWMEGNHGSDG 194
+KP N+ ++ LK+ DFG A D + V T Y APE+ L WM
Sbjct: 162 LKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH------- 210
Query: 195 YTGSCDLWSIGVVSYELLTGSTPF 218
Y + D+WS+G + ELLTG T F
Sbjct: 211 YNQTVDIWSVGCIMAELLTGRTLF 234
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 16/144 (11%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
S ++ N VY + ++ G D +++ Q L++ +F IY++ + ++Y+H +HRD
Sbjct: 107 SLEEFNDVYLV-THLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRD 162
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV-LEWMEGNHGSDG 194
+KP N+ ++ LK+ DFG A D + V T Y APE+ L WM
Sbjct: 163 LKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH------- 211
Query: 195 YTGSCDLWSIGVVSYELLTGSTPF 218
Y + D+WS+G + ELLTG T F
Sbjct: 212 YNQTVDIWSVGCIMAELLTGRTLF 235
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 16/144 (11%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
S ++ N VY + ++ G D +++ Q L++ +F IY++ + ++Y+H +HRD
Sbjct: 101 SLEEFNDVYLV-THLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRD 156
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV-LEWMEGNHGSDG 194
+KP N+ ++ LK+ DFG A D + V T Y APE+ L WM
Sbjct: 157 LKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH------- 205
Query: 195 YTGSCDLWSIGVVSYELLTGSTPF 218
Y + D+WS+G + ELLTG T F
Sbjct: 206 YNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 16/144 (11%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
S ++ N VY + ++ G D +++ Q L++ +F IY++ + ++Y+H +HRD
Sbjct: 107 SLEEFNDVYLV-THLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRD 162
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV-LEWMEGNHGSDG 194
+KP N+ ++ LK+ DFG A D + V T Y APE+ L WM
Sbjct: 163 LKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH------- 211
Query: 195 YTGSCDLWSIGVVSYELLTGSTPF 218
Y + D+WS+G + ELLTG T F
Sbjct: 212 YNQTVDIWSVGCIMAELLTGRTLF 235
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 16/144 (11%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
S ++ N VY + ++ G D +++ Q L++ +F IY++ + ++Y+H +HRD
Sbjct: 95 SLEEFNDVYLV-THLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRD 150
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV-LEWMEGNHGSDG 194
+KP N+ ++ LK+ DFG A D + V T Y APE+ L WM
Sbjct: 151 LKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH------- 199
Query: 195 YTGSCDLWSIGVVSYELLTGSTPF 218
Y + D+WS+G + ELLTG T F
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 16/144 (11%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
S ++ N VY + ++ G D +++ Q L++ +F IY++ + ++Y+H +HRD
Sbjct: 95 SLEEFNDVYLV-THLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRD 150
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV-LEWMEGNHGSDG 194
+KP N+ ++ LK+ DFG A D + V T Y APE+ L WM
Sbjct: 151 LKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH------- 199
Query: 195 YTGSCDLWSIGVVSYELLTGSTPF 218
Y + D+WS+G + ELLTG T F
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 16/144 (11%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
S ++ N VY + ++ G D +++ Q L++ +F IY++ + ++Y+H +HRD
Sbjct: 105 SLEEFNDVYLV-THLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRD 160
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV-LEWMEGNHGSDG 194
+KP N+ ++ LK+ DFG A D + V T Y APE+ L WM
Sbjct: 161 LKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH------- 209
Query: 195 YTGSCDLWSIGVVSYELLTGSTPF 218
Y + D+WS+G + ELLTG T F
Sbjct: 210 YNQTVDIWSVGCIMAELLTGRTLF 233
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 16/144 (11%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
S ++ N VY + ++ G D +++ Q L++ +F IY++ + ++Y+H +HRD
Sbjct: 97 SLEEFNDVYLV-THLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRD 152
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV-LEWMEGNHGSDG 194
+KP N+ ++ LK+ DFG A D + V T Y APE+ L WM
Sbjct: 153 LKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH------- 201
Query: 195 YTGSCDLWSIGVVSYELLTGSTPF 218
Y + D+WS+G + ELLTG T F
Sbjct: 202 YNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 16/144 (11%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
S ++ N VY + ++ G D +++ Q L++ +F IY++ + ++Y+H +HRD
Sbjct: 106 SLEEFNDVYLV-THLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRD 161
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV-LEWMEGNHGSDG 194
+KP N+ ++ LK+ DFG A D + V T Y APE+ L WM
Sbjct: 162 LKPSNLAVNEDXELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH------- 210
Query: 195 YTGSCDLWSIGVVSYELLTGSTPF 218
Y + D+WS+G + ELLTG T F
Sbjct: 211 YNQTVDIWSVGCIMAELLTGRTLF 234
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 16/144 (11%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
S ++ N VY + ++ G D +++ Q L++ +F IY++ + ++Y+H +HRD
Sbjct: 95 SLEEFNDVYLV-THLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRD 150
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV-LEWMEGNHGSDG 194
+KP N+ ++ LK+ DFG A D + V T Y APE+ L WM
Sbjct: 151 LKPSNLAVNEDCELKILDFGLARHTDD----EMAGFVATRWYRAPEIMLNWMH------- 199
Query: 195 YTGSCDLWSIGVVSYELLTGSTPF 218
Y + D+WS+G + ELLTG T F
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 16/144 (11%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
S ++ N VY + ++ G D +++ Q L++ +F IY++ + ++Y+H +HRD
Sbjct: 95 SLEEFNDVYLV-THLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRD 150
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV-LEWMEGNHGSDG 194
+KP N+ ++ LK+ DFG A D + V T Y APE+ L WM
Sbjct: 151 LKPSNLAVNEDCELKILDFGLARHTDD----EMAGFVATRWYRAPEIMLNWMH------- 199
Query: 195 YTGSCDLWSIGVVSYELLTGSTPF 218
Y + D+WS+G + ELLTG T F
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 16/144 (11%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
S ++ N VY + ++ G D +++ Q L++ +F IY++ + ++Y+H +HRD
Sbjct: 97 SLEEFNDVYLV-THLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRD 152
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV-LEWMEGNHGSDG 194
+KP N+ ++ LK+ DFG A D + V T Y APE+ L WM
Sbjct: 153 LKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH------- 201
Query: 195 YTGSCDLWSIGVVSYELLTGSTPF 218
Y + D+WS+G + ELLTG T F
Sbjct: 202 YNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 76/144 (52%), Gaps = 16/144 (11%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
S ++ N VY + ++ G D ++++Q L++ +F IY++ + ++Y+H +HRD
Sbjct: 95 SLEEFNDVYLV-THLMGADLNNIVKSQK---LTDDHVQFLIYQILRGLKYIHSADIIHRD 150
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV-LEWMEGNHGSDG 194
+KP N+ ++ LK+ DFG D + V T Y APE+ L WM
Sbjct: 151 LKPSNLAVNEDSELKILDFGLCRHTDD----EMTGYVATRWYRAPEIMLNWMH------- 199
Query: 195 YTGSCDLWSIGVVSYELLTGSTPF 218
Y + D+WS+G + ELLTG T F
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 16/144 (11%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
S ++ N VY + ++ G D +++ Q L++ +F IY++ + ++Y+H +HRD
Sbjct: 118 SLEEFNDVYLV-THLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRD 173
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV-LEWMEGNHGSDG 194
+KP N+ ++ LK+ DFG A D + V T Y APE+ L WM
Sbjct: 174 LKPSNLAVNEDCELKILDFGLARHTDD----EMXGYVATRWYRAPEIMLNWMH------- 222
Query: 195 YTGSCDLWSIGVVSYELLTGSTPF 218
Y + D+WS+G + ELLTG T F
Sbjct: 223 YNQTVDIWSVGCIMAELLTGRTLF 246
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 16/144 (11%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
S ++ N VY + ++ G D +++ Q L++ +F IY++ + ++Y+H +HRD
Sbjct: 118 SLEEFNDVYLV-THLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRD 173
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV-LEWMEGNHGSDG 194
+KP N+ ++ LK+ DFG A D + V T Y APE+ L WM
Sbjct: 174 LKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH------- 222
Query: 195 YTGSCDLWSIGVVSYELLTGSTPF 218
Y + D+WS+G + ELLTG T F
Sbjct: 223 YNQTVDIWSVGCIMAELLTGRTLF 246
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 16/144 (11%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
S ++ N VY + ++ G D +++ Q L++ +F IY++ + ++Y+H +HRD
Sbjct: 100 SLEEFNDVYLV-THLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRD 155
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV-LEWMEGNHGSDG 194
+KP N+ ++ LK+ DFG A D + V T Y APE+ L WM
Sbjct: 156 LKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH------- 204
Query: 195 YTGSCDLWSIGVVSYELLTGSTPF 218
Y + D+WS+G + ELLTG T F
Sbjct: 205 YNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 16/144 (11%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
S ++ N VY + ++ G D +++ Q L++ +F IY++ + ++Y+H +HRD
Sbjct: 95 SLEEFNDVYLV-THLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRD 150
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV-LEWMEGNHGSDG 194
+KP N+ ++ LK+ DFG A D + V T Y APE+ L WM
Sbjct: 151 LKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH------- 199
Query: 195 YTGSCDLWSIGVVSYELLTGSTPF 218
Y + D+WS+G + ELLTG T F
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 16/144 (11%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
S ++ N VY + ++ G D +++ Q L++ +F IY++ + ++Y+H +HRD
Sbjct: 92 SLEEFNDVYLV-THLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRD 147
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV-LEWMEGNHGSDG 194
+KP N+ ++ LK+ DFG A D + V T Y APE+ L WM
Sbjct: 148 LKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH------- 196
Query: 195 YTGSCDLWSIGVVSYELLTGSTPF 218
Y + D+WS+G + ELLTG T F
Sbjct: 197 YNQTVDIWSVGCIMAELLTGRTLF 220
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 16/144 (11%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
S ++ N VY + ++ G D +++ Q L++ +F IY++ + ++Y+H +HRD
Sbjct: 115 SLEEFNDVYLV-THLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRD 170
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV-LEWMEGNHGSDG 194
+KP N+ ++ LK+ DFG A D + V T Y APE+ L WM
Sbjct: 171 LKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH------- 219
Query: 195 YTGSCDLWSIGVVSYELLTGSTPF 218
Y + D+WS+G + ELLTG T F
Sbjct: 220 YNQTVDIWSVGCIMAELLTGRTLF 243
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 16/144 (11%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
S ++ N VY + ++ G D +++ Q L++ +F IY++ + ++Y+H +HRD
Sbjct: 114 SLEEFNDVYLV-THLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRD 169
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV-LEWMEGNHGSDG 194
+KP N+ ++ LK+ DFG A D + V T Y APE+ L WM
Sbjct: 170 LKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH------- 218
Query: 195 YTGSCDLWSIGVVSYELLTGSTPF 218
Y + D+WS+G + ELLTG T F
Sbjct: 219 YNQTVDIWSVGCIMAELLTGRTLF 242
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 16/144 (11%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
S ++ N VY + ++ G D +++ Q L++ +F IY++ + ++Y+H +HRD
Sbjct: 115 SLEEFNDVYLV-THLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRD 170
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV-LEWMEGNHGSDG 194
+KP N+ ++ LK+ DFG A D + V T Y APE+ L WM
Sbjct: 171 LKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH------- 219
Query: 195 YTGSCDLWSIGVVSYELLTGSTPF 218
Y + D+WS+G + ELLTG T F
Sbjct: 220 YNQTVDIWSVGCIMAELLTGRTLF 243
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 16/144 (11%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
S ++ N VY + ++ G D +++ Q L++ +F IY++ + ++Y+H +HRD
Sbjct: 92 SLEEFNDVYLV-THLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRD 147
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV-LEWMEGNHGSDG 194
+KP N+ ++ LK+ DFG A D + V T Y APE+ L WM
Sbjct: 148 LKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH------- 196
Query: 195 YTGSCDLWSIGVVSYELLTGSTPF 218
Y + D+WS+G + ELLTG T F
Sbjct: 197 YNQTVDIWSVGCIMAELLTGRTLF 220
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 16/144 (11%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
S ++ N VY + ++ G D +++ Q L++ +F IY++ + ++Y+H +HRD
Sbjct: 114 SLEEFNDVYLV-THLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRD 169
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV-LEWMEGNHGSDG 194
+KP N+ ++ LK+ DFG A D + V T Y APE+ L WM
Sbjct: 170 LKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH------- 218
Query: 195 YTGSCDLWSIGVVSYELLTGSTPF 218
Y + D+WS+G + ELLTG T F
Sbjct: 219 YNQTVDIWSVGCIMAELLTGRTLF 242
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 16/144 (11%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
S ++ N VY + ++ G D +++ Q L++ +F IY++ + ++Y+H +HRD
Sbjct: 91 SLEEFNDVYLV-THLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRD 146
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV-LEWMEGNHGSDG 194
+KP N+ ++ LK+ DFG A D + V T Y APE+ L WM
Sbjct: 147 LKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH------- 195
Query: 195 YTGSCDLWSIGVVSYELLTGSTPF 218
Y + D+WS+G + ELLTG T F
Sbjct: 196 YNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 16/144 (11%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
S ++ N VY + ++ G D +++ Q L++ +F IY++ + ++Y+H +HRD
Sbjct: 124 SLEEFNDVYLV-THLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRD 179
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV-LEWMEGNHGSDG 194
+KP N+ ++ LK+ DFG A D + V T Y APE+ L WM
Sbjct: 180 LKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH------- 228
Query: 195 YTGSCDLWSIGVVSYELLTGSTPF 218
Y + D+WS+G + ELLTG T F
Sbjct: 229 YNMTVDIWSVGCIMAELLTGRTLF 252
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 96/191 (50%), Gaps = 33/191 (17%)
Query: 115 YIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGH-LKLTDFGSATQVDKNGRIKSIVPVG 173
YIY+L +AV ++H LG HRDIKP N+L+++ + LKL DFGSA ++ + S+ +
Sbjct: 146 YIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE--PSVAXIC 203
Query: 174 TPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYET-LD--MTYSSI 230
+ Y APE++ G+ YT S DLWSIG V EL+ G F+ ET +D + I
Sbjct: 204 SRFYRAPELML------GATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQI 257
Query: 231 LACDTEDT----------VSFPS-----------SIRLSTAMVNFVQSLVQKLDARLNMD 269
+ T++ V FP+ S A+ Q L + D R+N
Sbjct: 258 MGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPY 317
Query: 270 QVLGHPVFDCL 280
+ + HP FD L
Sbjct: 318 EAMAHPFFDHL 328
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 16/144 (11%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
S ++ N VY + ++ G D +++ Q L++ +F IY++ + ++Y+H +HRD
Sbjct: 91 SLEEFNDVYLV-THLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRD 146
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV-LEWMEGNHGSDG 194
+KP N+ ++ LK+ DFG A D + V T Y APE+ L WM
Sbjct: 147 LKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH------- 195
Query: 195 YTGSCDLWSIGVVSYELLTGSTPF 218
Y + D+WS+G + ELLTG T F
Sbjct: 196 YNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 119/259 (45%), Gaps = 41/259 (15%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVLREKM--------PN----TIERDIMVKSKCPYI 70
+ G FG ++ +K+ + V+K + +EK+ P T+E I+ + + I
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANI 91
Query: 71 VNLFYSFQDMNHVYFIME-YVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGL 129
+ + F++ +ME + +G D ++ P L E A + +L AV YL
Sbjct: 92 IKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPR--LDEPLASYIFRQLVSAVGYLRLK 149
Query: 130 GYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGN 189
+HRDIK +N++++ +KL DFGSA +++ + GT EY APEVL GN
Sbjct: 150 DIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTF--CGTIEYCAPEVL---MGN 204
Query: 190 HGSDGYTGS-CDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTV--SFPSSIR 246
Y G ++WS+GV Y L+ PF C+ E+TV +
Sbjct: 205 P----YRGPELEMWSLGVTLYTLVFEENPF--------------CELEETVEAAIHPPYL 246
Query: 247 LSTAMVNFVQSLVQKLDAR 265
+S +++ V L+Q + R
Sbjct: 247 VSKELMSLVSGLLQPVPER 265
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 16/144 (11%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
S ++ N VY + ++ G D +++ Q L++ +F IY++ + ++Y+H +HRD
Sbjct: 91 SLEEFNDVYLV-THLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRD 146
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV-LEWMEGNHGSDG 194
+KP N+ ++ LK+ DFG A D + V T Y APE+ L WM
Sbjct: 147 LKPSNLAVNEDCELKILDFGLARHTDD----EMAGFVATRWYRAPEIMLNWMH------- 195
Query: 195 YTGSCDLWSIGVVSYELLTGSTPF 218
Y + D+WS+G + ELLTG T F
Sbjct: 196 YNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 16/144 (11%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
S ++ N VY + ++ G D +++ Q L++ +F IY++ + ++Y+H +HRD
Sbjct: 93 SLEEFNDVYLV-THLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRD 148
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV-LEWMEGNHGSDG 194
+KP N+ ++ LK+ DFG A D + V T Y APE+ L WM
Sbjct: 149 LKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH------- 197
Query: 195 YTGSCDLWSIGVVSYELLTGSTPF 218
Y + D+WS+G + ELLTG T F
Sbjct: 198 YNQTVDIWSVGCIMAELLTGRTLF 221
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 100/223 (44%), Gaps = 28/223 (12%)
Query: 13 SASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIER-----DIMVKSKC 67
+ +++K + G FG + + + +K+ +E P ER IM K
Sbjct: 13 TCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNH 72
Query: 68 PYIVNL------FYSFQDMNHVYFIMEYVTGGD---FVTLLENQPHGYLSESKARFYIYE 118
P +V+ + MEY GGD ++ EN L E R + +
Sbjct: 73 PNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFEN--CCGLKEGPIRTLLSD 130
Query: 119 LAQAVQYLHGLGYVHRDIKPDNMLLSATGHL---KLTDFGSATQVDKNGRIKSIVPVGTP 175
++ A++YLH +HRD+KP+N++L K+ D G A ++D+ VGT
Sbjct: 131 ISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEF--VGTL 188
Query: 176 EYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
+Y+APE+LE YT + D WS G +++E +TG PF
Sbjct: 189 QYLAPELLE-------QKKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 100/223 (44%), Gaps = 28/223 (12%)
Query: 13 SASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIER-----DIMVKSKC 67
+ +++K + G FG + + + +K+ +E P ER IM K
Sbjct: 12 TCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNH 71
Query: 68 PYIVNL------FYSFQDMNHVYFIMEYVTGGD---FVTLLENQPHGYLSESKARFYIYE 118
P +V+ + MEY GGD ++ EN L E R + +
Sbjct: 72 PNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFEN--CCGLKEGPIRTLLSD 129
Query: 119 LAQAVQYLHGLGYVHRDIKPDNMLLSATGHL---KLTDFGSATQVDKNGRIKSIVPVGTP 175
++ A++YLH +HRD+KP+N++L K+ D G A ++D+ VGT
Sbjct: 130 ISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEF--VGTL 187
Query: 176 EYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
+Y+APE+LE YT + D WS G +++E +TG PF
Sbjct: 188 QYLAPELLE-------QKKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 105/228 (46%), Gaps = 15/228 (6%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVL----REKMPNTIERDIMVKSKC--PYIVNLFYS 76
I +G +G +Y K + +KK+ E +P+T R+I + + P IV L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
N +Y + E+V D T ++ + + Y+++L Q + + H +HRD+
Sbjct: 70 IHTENKLYLVFEHVHQ-DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 128
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYT 196
KP N+L++ G +KL DFG A R + V T Y APE+L G Y+
Sbjct: 129 KPQNLLINTEGAIKLADFGLARAFGVPVRTYT-HEVVTLWYRAPEILL------GCKYYS 181
Query: 197 GSCDLWSIGVVSYELLTGSTPFNYET-LDMTYSSILACDTEDTVSFPS 243
+ D+WS+G + E++T F ++ +D + T D V +P
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 229
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 102/213 (47%), Gaps = 26/213 (12%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP---NTIERDIMVKSKC--PYI 70
DF+ + GN G ++ V K S K + E P N I R++ V +C PYI
Sbjct: 69 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 128
Query: 71 VNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYL---H 127
V + +F + ME++ GG +L+ G + E + + + YL H
Sbjct: 129 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKH 186
Query: 128 GLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVP--VGTPEYVAPEVLEW 185
+ +HRD+KP N+L+++ G +KL DFG + Q+ I S+ VGT Y++PE L
Sbjct: 187 KI--MHRDVKPSNILVNSRGEIKLCDFGVSGQL-----IDSMANSFVGTRSYMSPERL-- 237
Query: 186 MEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
+G H Y+ D+WS+G+ E+ G P
Sbjct: 238 -QGTH----YSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 107/221 (48%), Gaps = 30/221 (13%)
Query: 11 NVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP-----NTIERDIMVKS 65
N+S SDF +K + +G +G + K + +KK+ P E I+
Sbjct: 8 NIS-SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHF 66
Query: 66 KCPYIVNLFY-----SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELA 120
K I+ +F SF++ N VY I E + D ++ Q LS+ +++IY+
Sbjct: 67 KHENIITIFNIQRPDSFENFNEVYIIQE-LMQTDLHRVISTQ---MLSDDHIQYFIYQTL 122
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKN--------GRIKSIVP- 171
+AV+ LHG +HRD+KP N+L+++ LK+ DFG A +D++ G+ +V
Sbjct: 123 RAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEF 182
Query: 172 VGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELL 212
V T Y APEV+ S Y+ + D+WS G + EL
Sbjct: 183 VATRWYRAPEVML------TSAKYSRAMDVWSCGCILAELF 217
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 77/146 (52%), Gaps = 20/146 (13%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
S ++ N VY + ++ G D +++ Q L++ +F IY++ + ++Y+H +HRD
Sbjct: 102 SLEEFNDVYLV-THLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRD 157
Query: 136 IKPDNMLLSATGHLKLTDFGSA--TQVDKNGRIKSIVPVGTPEYVAPEV-LEWMEGNHGS 192
+KP N+ ++ LK+ DFG A T + G V T Y APE+ L WM
Sbjct: 158 LKPSNLAVNEDCELKILDFGLARHTADEMTGY------VATRWYRAPEIMLNWMH----- 206
Query: 193 DGYTGSCDLWSIGVVSYELLTGSTPF 218
Y + D+WS+G + ELLTG T F
Sbjct: 207 --YNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 76/144 (52%), Gaps = 16/144 (11%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
S ++ N VY + ++ G D +++ Q L++ +F IY++ + ++Y+H +HRD
Sbjct: 95 SLEEFNDVYLV-THLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRD 150
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV-LEWMEGNHGSDG 194
+KP N+ ++ LK+ D+G A D + V T Y APE+ L WM
Sbjct: 151 LKPSNLAVNEDCELKILDYGLARHTDD----EMTGYVATRWYRAPEIMLNWMH------- 199
Query: 195 YTGSCDLWSIGVVSYELLTGSTPF 218
Y + D+WS+G + ELLTG T F
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 107/221 (48%), Gaps = 32/221 (14%)
Query: 17 FDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMVKSKC---PYIVNL 73
F ++R QG FG + L +EK + + +KKV+++ E IM P IV L
Sbjct: 25 FQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQL 84
Query: 74 ---FYSF--QDMNHVYF--IMEYVTGGDFVTLLENQPHGYLSESKA------RFYIYELA 120
FY+ +D +Y +MEYV L Y A + ++++L
Sbjct: 85 QSYFYTLGERDRRDIYLNVVMEYVP-----DTLHRCCRNYYRRQVAPPPILIKVFLFQLI 139
Query: 121 QAVQYLH--GLGYVHRDIKPDNMLLS-ATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEY 177
+++ LH + HRDIKP N+L++ A G LKL DFGSA ++ + ++ + + Y
Sbjct: 140 RSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSE--PNVAYICSRYY 197
Query: 178 VAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
APE++ G+ YT + D+WS+G + E++ G F
Sbjct: 198 RAPELI------FGNQHYTTAVDIWSVGCIFAEMMLGEPIF 232
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 77/146 (52%), Gaps = 20/146 (13%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
S ++ N VY + ++ G D +++ Q L++ +F IY++ + ++Y+H +HRD
Sbjct: 102 SLEEFNDVYLV-THLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRD 157
Query: 136 IKPDNMLLSATGHLKLTDFGSA--TQVDKNGRIKSIVPVGTPEYVAPEV-LEWMEGNHGS 192
+KP N+ ++ LK+ DFG A T + G V T Y APE+ L WM
Sbjct: 158 LKPSNLAVNEDCELKILDFGLARHTADEMTGY------VATRWYRAPEIMLNWMH----- 206
Query: 193 DGYTGSCDLWSIGVVSYELLTGSTPF 218
Y + D+WS+G + ELLTG T F
Sbjct: 207 --YNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 77/146 (52%), Gaps = 20/146 (13%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
S ++ N VY + ++ G D +++ Q L++ +F IY++ + ++Y+H +HRD
Sbjct: 102 SLEEFNDVYLV-THLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRD 157
Query: 136 IKPDNMLLSATGHLKLTDFGSA--TQVDKNGRIKSIVPVGTPEYVAPEV-LEWMEGNHGS 192
+KP N+ ++ LK+ DFG A T + G V T Y APE+ L WM
Sbjct: 158 LKPSNLAVNEDCELKILDFGLARHTADEMTGY------VATRWYRAPEIMLNWMH----- 206
Query: 193 DGYTGSCDLWSIGVVSYELLTGSTPF 218
Y + D+WS+G + ELLTG T F
Sbjct: 207 --YNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 100/203 (49%), Gaps = 17/203 (8%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMVKSKCPYIVNLFYSFQDMNH 82
+ +G+FG+++ +++KQ+ +KKV R ++ E P IV L+ + ++
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKV-RLEVFRVEELVACAGLSSPRIVPLYGAVREGPW 140
Query: 83 VYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNML 142
V ME + GG L++ G L E +A +Y+ + + ++YLH +H D+K DN+L
Sbjct: 141 VNIFMELLEGGSLGQLIKQM--GCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVL 198
Query: 143 LSATG-HLKLTDFGSATQVDKNGRIKSI-----VPVGTPEYVAPEVLEWMEGNHGSDGYT 196
LS+ G L DFG A + +G KS+ +P GT ++APEV+
Sbjct: 199 LSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIP-GTETHMAPEVVM-------GKPCD 250
Query: 197 GSCDLWSIGVVSYELLTGSTPFN 219
D+WS + +L G P+
Sbjct: 251 AKVDIWSSCCMMLHMLNGCHPWT 273
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 103/216 (47%), Gaps = 20/216 (9%)
Query: 11 NVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP-----NTIERDIMVKS 65
N+S SDF +K + +G +G + K + +KK+ P E I+
Sbjct: 8 NIS-SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHF 66
Query: 66 KCPYIVNLFY-----SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELA 120
K I+ +F SF++ N VY I E + D ++ Q LS+ +++IY+
Sbjct: 67 KHENIITIFNIQRPDSFENFNEVYIIQE-LMQTDLHRVISTQ---MLSDDHIQYFIYQTL 122
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPV----GTPE 176
+AV+ LHG +HRD+KP N+L+++ LK+ DFG A +D++ S P G E
Sbjct: 123 RAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNS-EPTGQQSGMTE 181
Query: 177 YVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELL 212
YVA E S Y+ + D+WS G + EL
Sbjct: 182 YVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 102/213 (47%), Gaps = 26/213 (12%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP---NTIERDIMVKSKC--PYI 70
DF+ + GN G ++ V K S K + E P N I R++ V +C PYI
Sbjct: 34 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 93
Query: 71 VNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYL---H 127
V + +F + ME++ GG +L+ G + E + + + YL H
Sbjct: 94 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKH 151
Query: 128 GLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVP--VGTPEYVAPEVLEW 185
+ +HRD+KP N+L+++ G +KL DFG + Q+ I S+ VGT Y++PE L
Sbjct: 152 KI--MHRDVKPSNILVNSRGEIKLCDFGVSGQL-----IDSMANSFVGTRSYMSPERL-- 202
Query: 186 MEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
+G H Y+ D+WS+G+ E+ G P
Sbjct: 203 -QGTH----YSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 100/203 (49%), Gaps = 17/203 (8%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMVKSKCPYIVNLFYSFQDMNH 82
+ +G+FG+++ +++KQ+ +KKV R ++ E P IV L+ + ++
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKV-RLEVFRVEELVACAGLSSPRIVPLYGAVREGPW 124
Query: 83 VYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNML 142
V ME + GG L++ G L E +A +Y+ + + ++YLH +H D+K DN+L
Sbjct: 125 VNIFMELLEGGSLGQLIKQM--GCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVL 182
Query: 143 LSATG-HLKLTDFGSATQVDKNGRIKSI-----VPVGTPEYVAPEVLEWMEGNHGSDGYT 196
LS+ G L DFG A + +G KS+ +P GT ++APEV+
Sbjct: 183 LSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIP-GTETHMAPEVVM-------GKPCD 234
Query: 197 GSCDLWSIGVVSYELLTGSTPFN 219
D+WS + +L G P+
Sbjct: 235 AKVDIWSSCCMMLHMLNGCHPWT 257
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 88/208 (42%), Gaps = 45/208 (21%)
Query: 107 LSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDK--NG 164
SE K ++ +Y++ + ++Y+H G VHRD+KP N+ ++ LK+ DFG A D G
Sbjct: 123 FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTG 182
Query: 165 RIKSIVPVGTPEYVAPEV-LEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETL 223
V T Y APEV L WM Y + D+WS+G + E+LTG T F +
Sbjct: 183 Y------VVTRWYRAPEVILSWMH-------YNQTVDIWSVGCIMAEMLTGKTLFKGKDY 229
Query: 224 DMTYSSILACDTEDTVSFPSSIRLSTAMVNFVQSLVQK---------------------- 261
+ IL F + A +++QSL Q
Sbjct: 230 LDQLTQILKVTGVPGTEFVQKLN-DKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEK 288
Query: 262 -----LDARLNMDQVLGHPVFDCLDSDP 284
+D RL Q L HP F+ DP
Sbjct: 289 MLELDVDKRLTAAQALTHPFFEPF-RDP 315
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 89/176 (50%), Gaps = 21/176 (11%)
Query: 45 MKKVLREKMPNTIERDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPH 104
+K +LR + N I + ++++ + + M VY + + + D LL+ Q
Sbjct: 72 IKILLRFRHENIIGINDIIRAP---------TIEQMKDVYIVQD-LMETDLYKLLKTQ-- 119
Query: 105 GYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNG 164
+LS +++Y++ + ++Y+H +HRD+KP N+LL+ T LK+ DFG A D +
Sbjct: 120 -HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 178
Query: 165 RIKSIVP--VGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
+ V T Y APE++ S GYT S D+WS+G + E+L+ F
Sbjct: 179 DHTGFLTEYVATRWYRAPEIML------NSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 89/176 (50%), Gaps = 21/176 (11%)
Query: 45 MKKVLREKMPNTIERDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPH 104
+K +LR + N I + ++++ + + M VY + + + D LL+ Q
Sbjct: 76 IKILLRFRHENIIGINDIIRAP---------TIEQMKDVYIVQD-LMETDLYKLLKTQ-- 123
Query: 105 GYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNG 164
+LS +++Y++ + ++Y+H +HRD+KP N+LL+ T LK+ DFG A D +
Sbjct: 124 -HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 182
Query: 165 RIKSIV--PVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
+ V T Y APE++ S GYT S D+WS+G + E+L+ F
Sbjct: 183 DHTGFLXEXVATRWYRAPEIML------NSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 89/176 (50%), Gaps = 21/176 (11%)
Query: 45 MKKVLREKMPNTIERDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPH 104
+K +LR + N I + ++++ + + M VY + + + D LL+ Q
Sbjct: 77 IKILLRFRHENIIGINDIIRAP---------TIEQMKDVYIVQD-LMETDLYKLLKTQ-- 124
Query: 105 GYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNG 164
+LS +++Y++ + ++Y+H +HRD+KP N+LL+ T LK+ DFG A D +
Sbjct: 125 -HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 183
Query: 165 RIKSIV--PVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
+ V T Y APE++ S GYT S D+WS+G + E+L+ F
Sbjct: 184 DHTGFLXEXVATRWYRAPEIML------NSKGYTKSIDIWSVGCILAEMLSNRPIF 233
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 89/176 (50%), Gaps = 21/176 (11%)
Query: 45 MKKVLREKMPNTIERDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPH 104
+K +LR + N I + ++++ + + M VY + + + D LL+ Q
Sbjct: 76 IKILLRFRHENIIGINDIIRAP---------TIEQMKDVYIVQD-LMETDLYKLLKTQ-- 123
Query: 105 GYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNG 164
+LS +++Y++ + ++Y+H +HRD+KP N+LL+ T LK+ DFG A D +
Sbjct: 124 -HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 182
Query: 165 RIKSIVP--VGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
+ V T Y APE++ S GYT S D+WS+G + E+L+ F
Sbjct: 183 DHTGFLTEYVATRWYRAPEIML------NSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 89/176 (50%), Gaps = 21/176 (11%)
Query: 45 MKKVLREKMPNTIERDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPH 104
+K +LR + N I + ++++ + + M VY + + + D LL+ Q
Sbjct: 70 IKILLRFRHENIIGINDIIRAP---------TIEQMKDVYIVQD-LMETDLYKLLKTQ-- 117
Query: 105 GYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNG 164
+LS +++Y++ + ++Y+H +HRD+KP N+LL+ T LK+ DFG A D +
Sbjct: 118 -HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 176
Query: 165 RIKSIVP--VGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
+ V T Y APE++ S GYT S D+WS+G + E+L+ F
Sbjct: 177 DHTGFLTEYVATRWYRAPEIML------NSKGYTKSIDIWSVGCILAEMLSNRPIF 226
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 89/176 (50%), Gaps = 21/176 (11%)
Query: 45 MKKVLREKMPNTIERDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPH 104
+K +LR + N I + ++++ + + M VY + + + D LL+ Q
Sbjct: 77 IKILLRFRHENIIGINDIIRAP---------TIEQMKDVYIVQD-LMETDLYKLLKTQ-- 124
Query: 105 GYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNG 164
+LS +++Y++ + ++Y+H +HRD+KP N+LL+ T LK+ DFG A D +
Sbjct: 125 -HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 183
Query: 165 RIKSIVP--VGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
+ V T Y APE++ S GYT S D+WS+G + E+L+ F
Sbjct: 184 DHTGFLTEYVATRWYRAPEIML------NSKGYTKSIDIWSVGCILAEMLSNRPIF 233
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 89/176 (50%), Gaps = 21/176 (11%)
Query: 45 MKKVLREKMPNTIERDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPH 104
+K +LR + N I + ++++ + + M VY + + + D LL+ Q
Sbjct: 78 IKILLRFRHENIIGINDIIRAP---------TIEQMKDVYIVQD-LMETDLYKLLKTQ-- 125
Query: 105 GYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNG 164
+LS +++Y++ + ++Y+H +HRD+KP N+LL+ T LK+ DFG A D +
Sbjct: 126 -HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 184
Query: 165 RIKSIVP--VGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
+ V T Y APE++ S GYT S D+WS+G + E+L+ F
Sbjct: 185 DHTGFLTEYVATRWYRAPEIML------NSKGYTKSIDIWSVGCILAEMLSNRPIF 234
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 89/176 (50%), Gaps = 21/176 (11%)
Query: 45 MKKVLREKMPNTIERDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPH 104
+K +LR + N I + ++++ + + M VY + + + D LL+ Q
Sbjct: 69 IKILLRFRHENIIGINDIIRAP---------TIEQMKDVYIVQD-LMETDLYKLLKTQ-- 116
Query: 105 GYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNG 164
+LS +++Y++ + ++Y+H +HRD+KP N+LL+ T LK+ DFG A D +
Sbjct: 117 -HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 175
Query: 165 RIKSIVP--VGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
+ V T Y APE++ S GYT S D+WS+G + E+L+ F
Sbjct: 176 DHTGFLTEYVATRWYRAPEIML------NSKGYTKSIDIWSVGCILAEMLSNRPIF 225
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 89/176 (50%), Gaps = 21/176 (11%)
Query: 45 MKKVLREKMPNTIERDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPH 104
+K +LR + N I + ++++ + + M VY + + + D LL+ Q
Sbjct: 76 IKILLRFRHENIIGINDIIRAP---------TIEQMKDVYIVQD-LMETDLYKLLKTQ-- 123
Query: 105 GYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNG 164
+LS +++Y++ + ++Y+H +HRD+KP N+LL+ T LK+ DFG A D +
Sbjct: 124 -HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 182
Query: 165 RIKSIVP--VGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
+ V T Y APE++ S GYT S D+WS+G + E+L+ F
Sbjct: 183 DHTGFLTEYVATRWYRAPEIML------NSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 105/222 (47%), Gaps = 32/222 (14%)
Query: 11 NVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP-----NTIERDIMVKS 65
N+S SDF +K + +G +G + K + +KK+ P E I+
Sbjct: 8 NIS-SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHF 66
Query: 66 KCPYIVNLFY-----SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELA 120
K I+ +F SF++ N VY I E + D ++ Q LS+ +++IY+
Sbjct: 67 KHENIITIFNIQRPDSFENFNEVYIIQE-LMQTDLHRVISTQ---MLSDDHIQYFIYQTL 122
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVG------- 173
+AV+ LHG +HRD+KP N+L+++ LK+ DFG A +D++ S P G
Sbjct: 123 RAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNS-EPTGQQSGMTE 181
Query: 174 ---TPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELL 212
T Y APEV+ S Y+ + D+WS G + EL
Sbjct: 182 XVATRWYRAPEVML------TSAKYSRAMDVWSCGCILAELF 217
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 89/176 (50%), Gaps = 21/176 (11%)
Query: 45 MKKVLREKMPNTIERDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPH 104
+K +LR + N I + ++++ + + M VY + + + D LL+ Q
Sbjct: 70 IKILLRFRHENIIGINDIIRAP---------TIEQMKDVYIVQD-LMETDLYKLLKTQ-- 117
Query: 105 GYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNG 164
+LS +++Y++ + ++Y+H +HRD+KP N+LL+ T LK+ DFG A D +
Sbjct: 118 -HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 176
Query: 165 RIKSIVP--VGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
+ V T Y APE++ S GYT S D+WS+G + E+L+ F
Sbjct: 177 DHTGFLTEYVATRWYRAPEIML------NSKGYTKSIDIWSVGCILAEMLSNRPIF 226
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 89/176 (50%), Gaps = 21/176 (11%)
Query: 45 MKKVLREKMPNTIERDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPH 104
+K +LR + N I + ++++ + + M VY + + + D LL+ Q
Sbjct: 72 IKILLRFRHENIIGINDIIRAP---------TIEQMKDVYIVQD-LMETDLYKLLKTQ-- 119
Query: 105 GYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNG 164
+LS +++Y++ + ++Y+H +HRD+KP N+LL+ T LK+ DFG A D +
Sbjct: 120 -HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDH 178
Query: 165 RIKSIVP--VGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
+ V T Y APE++ S GYT S D+WS+G + E+L+ F
Sbjct: 179 DHTGFLTEYVATRWYRAPEIML------NSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 89/176 (50%), Gaps = 21/176 (11%)
Query: 45 MKKVLREKMPNTIERDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPH 104
+K +LR + N I + ++++ + + M VY + + + D LL+ Q
Sbjct: 80 IKILLRFRHENIIGINDIIRAP---------TIEQMKDVYIVQD-LMETDLYKLLKTQ-- 127
Query: 105 GYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNG 164
+LS +++Y++ + ++Y+H +HRD+KP N+LL+ T LK+ DFG A D +
Sbjct: 128 -HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 186
Query: 165 RIKSIVP--VGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
+ V T Y APE++ S GYT S D+WS+G + E+L+ F
Sbjct: 187 DHTGFLTEYVATRWYRAPEIML------NSKGYTKSIDIWSVGCILAEMLSNRPIF 236
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 89/176 (50%), Gaps = 21/176 (11%)
Query: 45 MKKVLREKMPNTIERDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPH 104
+K +LR + N I + ++++ + + M VY + + + D LL+ Q
Sbjct: 72 IKILLRFRHENIIGINDIIRAP---------TIEQMKDVYIVQD-LMETDLYKLLKTQ-- 119
Query: 105 GYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNG 164
+LS +++Y++ + ++Y+H +HRD+KP N+LL+ T LK+ DFG A D +
Sbjct: 120 -HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 178
Query: 165 RIKSIVP--VGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
+ V T Y APE++ S GYT S D+WS+G + E+L+ F
Sbjct: 179 DHTGFLTEYVATRWYRAPEIML------NSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 89/176 (50%), Gaps = 21/176 (11%)
Query: 45 MKKVLREKMPNTIERDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPH 104
+K +LR + N I + ++++ + + M VY + + + D LL+ Q
Sbjct: 72 IKILLRFRHENIIGINDIIRAP---------TIEQMKDVYIVQD-LMETDLYKLLKTQ-- 119
Query: 105 GYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNG 164
+LS +++Y++ + ++Y+H +HRD+KP N+LL+ T LK+ DFG A D +
Sbjct: 120 -HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDH 178
Query: 165 RIKSIVP--VGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
+ V T Y APE++ S GYT S D+WS+G + E+L+ F
Sbjct: 179 DHTGFLTEYVATRWYRAPEIML------NSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 89/176 (50%), Gaps = 21/176 (11%)
Query: 45 MKKVLREKMPNTIERDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPH 104
+K +LR + N I + ++++ + + M VY + + + D LL+ Q
Sbjct: 76 IKILLRFRHENIIGINDIIRAP---------TIEQMKDVYIVQD-LMETDLYKLLKTQ-- 123
Query: 105 GYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNG 164
+LS +++Y++ + ++Y+H +HRD+KP N+LL+ T LK+ DFG A D +
Sbjct: 124 -HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDH 182
Query: 165 RIKSIVP--VGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
+ V T Y APE++ S GYT S D+WS+G + E+L+ F
Sbjct: 183 DHTGFLTEYVATRWYRAPEIML------NSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 89/176 (50%), Gaps = 21/176 (11%)
Query: 45 MKKVLREKMPNTIERDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPH 104
+K +LR + N I + ++++ + + M VY + + + D LL+ Q
Sbjct: 74 IKILLRFRHENIIGINDIIRAP---------TIEQMKDVYIVQD-LMETDLYKLLKTQ-- 121
Query: 105 GYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNG 164
+LS +++Y++ + ++Y+H +HRD+KP N+LL+ T LK+ DFG A D +
Sbjct: 122 -HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 180
Query: 165 RIKSIVP--VGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
+ V T Y APE++ S GYT S D+WS+G + E+L+ F
Sbjct: 181 DHTGFLTEYVATRWYRAPEIML------NSKGYTKSIDIWSVGCILAEMLSNRPIF 230
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 104/222 (46%), Gaps = 39/222 (17%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTI------ERDIMVKSKCPY 69
D + I +GNFG+++ ++ NT V K RE +P + E I+ + P
Sbjct: 115 DLVLGEQIGRGNFGEVF-SGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPN 173
Query: 70 IVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAV------ 123
IV L +Y +ME V GGDF+T L + AR + L Q V
Sbjct: 174 IVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTE--------GARLRVKTLLQMVGDAAAG 225
Query: 124 -QYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQ-----VDKNGRIKSIVPVGTPEY 177
+YL +HRD+ N L++ LK++DFG + + +G ++ VPV ++
Sbjct: 226 MEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQ-VPV---KW 281
Query: 178 VAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
APE L N+G Y+ D+WS G++ +E + G++P+
Sbjct: 282 TAPEAL-----NYGR--YSSESDVWSFGILLWETFSLGASPY 316
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 89/176 (50%), Gaps = 21/176 (11%)
Query: 45 MKKVLREKMPNTIERDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPH 104
+K +LR + N I + ++++ + + M VY + + + D LL+ Q
Sbjct: 76 IKILLRFRHENIIGINDIIRAP---------TIEQMKDVYIVQD-LMETDLYKLLKTQ-- 123
Query: 105 GYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNG 164
+LS +++Y++ + ++Y+H +HRD+KP N+LL+ T LK+ DFG A D +
Sbjct: 124 -HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDH 182
Query: 165 RIKSIVP--VGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
+ V T Y APE++ S GYT S D+WS+G + E+L+ F
Sbjct: 183 DHTGFLTEYVATRWYRAPEIML------NSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 88/208 (42%), Gaps = 45/208 (21%)
Query: 107 LSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDK--NG 164
SE K ++ +Y++ + ++Y+H G VHRD+KP N+ ++ LK+ DFG A D G
Sbjct: 141 FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTG 200
Query: 165 RIKSIVPVGTPEYVAPEV-LEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETL 223
V T Y APEV L WM Y + D+WS+G + E+LTG T F +
Sbjct: 201 Y------VVTRWYRAPEVILSWMH-------YNQTVDIWSVGCIMAEMLTGKTLFKGKDY 247
Query: 224 DMTYSSILACDTEDTVSFPSSIRLSTAMVNFVQSLVQK---------------------- 261
+ IL F + A +++QSL Q
Sbjct: 248 LDQLTQILKVTGVPGTEFVQKLN-DKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEK 306
Query: 262 -----LDARLNMDQVLGHPVFDCLDSDP 284
+D RL Q L HP F+ DP
Sbjct: 307 MLELDVDKRLTAAQALTHPFFEPF-RDP 333
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 100/203 (49%), Gaps = 17/203 (8%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMVKSKCPYIVNLFYSFQDMNH 82
+ +G+FG+++ +++KQ+ +KKV R ++ E P IV L+ + ++
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKV-RLEVFRVEELVACAGLSSPRIVPLYGAVREGPW 138
Query: 83 VYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNML 142
V ME + GG L++ G L E +A +Y+ + + ++YLH +H D+K DN+L
Sbjct: 139 VNIFMELLEGGSLGQLIKQM--GCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVL 196
Query: 143 LSATG-HLKLTDFGSATQVDKNGRIKSI-----VPVGTPEYVAPEVLEWMEGNHGSDGYT 196
LS+ G L DFG A + +G KS+ +P GT ++APEV+
Sbjct: 197 LSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIP-GTETHMAPEVVM-------GKPCD 248
Query: 197 GSCDLWSIGVVSYELLTGSTPFN 219
D+WS + +L G P+
Sbjct: 249 AKVDIWSSCCMMLHMLNGCHPWT 271
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 101/220 (45%), Gaps = 40/220 (18%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP---NTIERDIMVKSKC--PYI 70
DF+ + GN G + V+ + S K + E P N I R++ V +C PYI
Sbjct: 17 DFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 76
Query: 71 VNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQ---PHGYLSESKARFYIYELAQAVQYLH 127
V + +F + ME++ GG +L+ P L + ++ L
Sbjct: 77 VGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKV-----------SIAVLR 125
Query: 128 GLGYV-------HRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVP--VGTPEYV 178
GL Y+ HRD+KP N+L+++ G +KL DFG + Q+ I S+ VGT Y+
Sbjct: 126 GLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-----IDSMANSFVGTRSYM 180
Query: 179 APEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
APE L +G H Y+ D+WS+G+ EL G P
Sbjct: 181 APERL---QGTH----YSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 89/176 (50%), Gaps = 21/176 (11%)
Query: 45 MKKVLREKMPNTIERDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPH 104
+K +LR + N I + ++++ + + M VY + + + D LL+ Q
Sbjct: 76 IKILLRFRHENIIGINDIIRAP---------TIEQMKDVYIVQD-LMETDLYKLLKCQ-- 123
Query: 105 GYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNG 164
+LS +++Y++ + ++Y+H +HRD+KP N+LL+ T LK+ DFG A D +
Sbjct: 124 -HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 182
Query: 165 RIKSIVP--VGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
+ V T Y APE++ S GYT S D+WS+G + E+L+ F
Sbjct: 183 DHTGFLTEYVATRWYRAPEIML------NSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 89/176 (50%), Gaps = 21/176 (11%)
Query: 45 MKKVLREKMPNTIERDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPH 104
+K +LR + N I + ++++ + + M VY + + + D LL+ Q
Sbjct: 72 IKILLRFRHENIIGINDIIRAP---------TIEQMKDVYIVQD-LMETDLYKLLKTQ-- 119
Query: 105 GYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNG 164
+LS +++Y++ + ++Y+H +HRD+KP N+LL+ T LK+ DFG A D +
Sbjct: 120 -HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDH 178
Query: 165 RIKSIVP--VGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
+ V T Y APE++ S GYT S D+WS+G + E+L+ F
Sbjct: 179 DHTGFLTEYVATRWYRAPEIML------NSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 104/222 (46%), Gaps = 39/222 (17%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTI------ERDIMVKSKCPY 69
D + I +GNFG+++ ++ NT V K RE +P + E I+ + P
Sbjct: 115 DLVLGEQIGRGNFGEVF-SGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPN 173
Query: 70 IVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAV------ 123
IV L +Y +ME V GGDF+T L + AR + L Q V
Sbjct: 174 IVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTE--------GARLRVKTLLQMVGDAAAG 225
Query: 124 -QYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQ-----VDKNGRIKSIVPVGTPEY 177
+YL +HRD+ N L++ LK++DFG + + +G ++ VPV ++
Sbjct: 226 MEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQ-VPV---KW 281
Query: 178 VAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
APE L N+G Y+ D+WS G++ +E + G++P+
Sbjct: 282 TAPEAL-----NYGR--YSSESDVWSFGILLWETFSLGASPY 316
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 75/144 (52%), Gaps = 16/144 (11%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
S ++ N VY + ++ G D +++ Q L++ +F IY++ + ++Y+H +HRD
Sbjct: 95 SLEEFNDVYLV-THLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRD 150
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV-LEWMEGNHGSDG 194
+KP N+ ++ LK+ FG A D + V T Y APE+ L WM
Sbjct: 151 LKPSNLAVNEDCELKILGFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH------- 199
Query: 195 YTGSCDLWSIGVVSYELLTGSTPF 218
Y + D+WS+G + ELLTG T F
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 104/228 (45%), Gaps = 15/228 (6%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVL----REKMPNTIERDIMVKSKC--PYIVNLFYS 76
I +G +G +Y K + +KK+ E +P+T R+I + + P IV L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
N +Y + E++ D T ++ + + Y+++L Q + + H +HRD+
Sbjct: 74 IHTENKLYLVFEFLHQ-DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 132
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYT 196
KP N+L++ G +KL DFG A R V T Y APE+L G Y+
Sbjct: 133 KPQNLLINTEGAIKLADFGLARAFGVPVRTYX-HEVVTLWYRAPEILL------GCKYYS 185
Query: 197 GSCDLWSIGVVSYELLTGSTPFNYET-LDMTYSSILACDTEDTVSFPS 243
+ D+WS+G + E++T F ++ +D + T D V +P
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 233
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 89/176 (50%), Gaps = 21/176 (11%)
Query: 45 MKKVLREKMPNTIERDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPH 104
+K +LR + N I + ++++ + + M VY + + + D LL+ Q
Sbjct: 92 IKILLRFRHENIIGINDIIRAP---------TIEQMKDVYIVQD-LMETDLYKLLKTQ-- 139
Query: 105 GYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNG 164
+LS +++Y++ + ++Y+H +HRD+KP N+LL+ T LK+ DFG A D +
Sbjct: 140 -HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 198
Query: 165 RIKSIVP--VGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
+ V T Y APE++ S GYT S D+WS+G + E+L+ F
Sbjct: 199 DHTGFLTEYVATRWYRAPEIML------NSKGYTKSIDIWSVGCILAEMLSNRPIF 248
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 75/146 (51%), Gaps = 20/146 (13%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
S ++ N VY + ++ G D +++ L++ +F IY++ + ++Y+H +HRD
Sbjct: 91 SLEEFNDVYLV-THLMGADLNNIVKC---AKLTDDHVQFLIYQILRGLKYIHSADIIHRD 146
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDK--NGRIKSIVPVGTPEYVAPEV-LEWMEGNHGS 192
+KP N+ ++ LK+ DFG A D G V T Y APE+ L WM
Sbjct: 147 LKPSNLAVNEDCELKILDFGLARHTDDEMTGY------VATRWYRAPEIMLNWMH----- 195
Query: 193 DGYTGSCDLWSIGVVSYELLTGSTPF 218
Y + D+WS+G + ELLTG T F
Sbjct: 196 --YNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 76/145 (52%), Gaps = 12/145 (8%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
+ + M VY + + + D LL+ Q +LS +++Y++ + ++Y+H +HRD
Sbjct: 96 TIEQMKDVYIVQD-LMETDLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRD 151
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVP--VGTPEYVAPEVLEWMEGNHGSD 193
+KP N+LL+ T LK+ DFG A D + + V T Y APE++ S
Sbjct: 152 LKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML------NSK 205
Query: 194 GYTGSCDLWSIGVVSYELLTGSTPF 218
GYT S D+WS+G + E+L+ F
Sbjct: 206 GYTKSIDIWSVGCILAEMLSNRPIF 230
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 105/228 (46%), Gaps = 15/228 (6%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVL----REKMPNTIERDIMVKSKC--PYIVNLFYS 76
I +G +G +Y K + +KK+ E +P+T R+I + + P IV L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
N +Y + E+++ D ++ + + Y+++L Q + + H +HRD+
Sbjct: 72 IHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 130
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYT 196
KP+N+L++ G +KL DFG A R V T Y APE+L G Y+
Sbjct: 131 KPENLLINTEGAIKLADFGLARAFGVPVRTYX-HEVVTLWYRAPEILL------GCKYYS 183
Query: 197 GSCDLWSIGVVSYELLTGSTPFNYET-LDMTYSSILACDTEDTVSFPS 243
+ D+WS+G + E++T F ++ +D + T D V +P
Sbjct: 184 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 231
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 76/145 (52%), Gaps = 12/145 (8%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
+ + M VY + + + D LL+ Q +LS +++Y++ + ++Y+H +HRD
Sbjct: 96 TIEQMKDVYIVQD-LMETDLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRD 151
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVP--VGTPEYVAPEVLEWMEGNHGSD 193
+KP N+LL+ T LK+ DFG A D + + V T Y APE++ S
Sbjct: 152 LKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML------NSK 205
Query: 194 GYTGSCDLWSIGVVSYELLTGSTPF 218
GYT S D+WS+G + E+L+ F
Sbjct: 206 GYTKSIDIWSVGCILAEMLSNRPIF 230
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 76/143 (53%), Gaps = 14/143 (9%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
S ++ N VY + ++ G D +++ Q L++ +F IY++ + ++Y+H +HRD
Sbjct: 95 SLEEFNDVYLV-THLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRD 150
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGY 195
+KP N+ ++ LK+ DFG A D + V T Y APE++ + H Y
Sbjct: 151 LKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIM--LNAMH----Y 200
Query: 196 TGSCDLWSIGVVSYELLTGSTPF 218
+ D+WS+G + ELLTG T F
Sbjct: 201 NQTVDIWSVGCIMAELLTGRTLF 223
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 105/228 (46%), Gaps = 15/228 (6%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVL----REKMPNTIERDIMVKSKC--PYIVNLFYS 76
I +G +G +Y K + +KK+ E +P+T R+I + + P IV L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
N +Y + E+++ D ++ + + Y+++L Q + + H +HRD+
Sbjct: 74 IHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 132
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYT 196
KP+N+L++ G +KL DFG A R V T Y APE+L G Y+
Sbjct: 133 KPENLLINTEGAIKLADFGLARAFGVPVRTYX-HEVVTLWYRAPEILL------GCKYYS 185
Query: 197 GSCDLWSIGVVSYELLTGSTPFNYET-LDMTYSSILACDTEDTVSFPS 243
+ D+WS+G + E++T F ++ +D + T D V +P
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 233
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 102/213 (47%), Gaps = 26/213 (12%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP---NTIERDIMVKSKC--PYI 70
DF+ + GN G ++ V K S K + E P N I R++ V +C PYI
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 71 VNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYL---H 127
V + +F + ME++ GG +L+ G + E + + + YL H
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKH 124
Query: 128 GLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVP--VGTPEYVAPEVLEW 185
+ +HRD+KP N+L+++ G +KL DFG + Q+ I S+ VGT Y++PE L
Sbjct: 125 KI--MHRDVKPSNILVNSRGEIKLCDFGVSGQL-----IDSMANSFVGTRSYMSPERL-- 175
Query: 186 MEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
+G H Y+ D+WS+G+ E+ G P
Sbjct: 176 -QGTH----YSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 102/213 (47%), Gaps = 26/213 (12%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP---NTIERDIMVKSKC--PYI 70
DF+ + GN G ++ V K S K + E P N I R++ V +C PYI
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 71 VNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYL---H 127
V + +F + ME++ GG +L+ G + E + + + YL H
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKH 124
Query: 128 GLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVP--VGTPEYVAPEVLEW 185
+ +HRD+KP N+L+++ G +KL DFG + Q+ I S+ VGT Y++PE L
Sbjct: 125 KI--MHRDVKPSNILVNSRGEIKLCDFGVSGQL-----IDSMANSFVGTRSYMSPERL-- 175
Query: 186 MEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
+G H Y+ D+WS+G+ E+ G P
Sbjct: 176 -QGTH----YSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 75/144 (52%), Gaps = 16/144 (11%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
S ++ N VY + ++ G D +++ Q L++ +F IY++ + ++Y+H +HRD
Sbjct: 95 SLEEFNDVYLV-THLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRD 150
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV-LEWMEGNHGSDG 194
+KP N+ ++ LK+ D G A D + V T Y APE+ L WM
Sbjct: 151 LKPSNLAVNEDCELKILDAGLARHTDD----EMTGYVATRWYRAPEIMLNWMH------- 199
Query: 195 YTGSCDLWSIGVVSYELLTGSTPF 218
Y + D+WS+G + ELLTG T F
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 102/213 (47%), Gaps = 26/213 (12%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP---NTIERDIMVKSKC--PYI 70
DF+ + GN G ++ V K S K + E P N I R++ V +C PYI
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 71 VNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYL---H 127
V + +F + ME++ GG +L+ G + E + + + YL H
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKH 124
Query: 128 GLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVP--VGTPEYVAPEVLEW 185
+ +HRD+KP N+L+++ G +KL DFG + Q+ I S+ VGT Y++PE L
Sbjct: 125 KI--MHRDVKPSNILVNSRGEIKLCDFGVSGQL-----IDSMANSFVGTRSYMSPERL-- 175
Query: 186 MEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
+G H Y+ D+WS+G+ E+ G P
Sbjct: 176 -QGTH----YSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 104/228 (45%), Gaps = 15/228 (6%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVL----REKMPNTIERDIMVKSKC--PYIVNLFYS 76
I +G +G +Y K + +KK+ E +P+T R+I + + P IV L
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 74
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
N +Y + E++ D ++ + + Y+++L Q + + H +HRD+
Sbjct: 75 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 133
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYT 196
KP N+L++ G +KL DFG A R + V T Y APE+L G Y+
Sbjct: 134 KPQNLLINTEGAIKLADFGLARAFGVPVRTYT-HEVVTLWYRAPEILL------GCKYYS 186
Query: 197 GSCDLWSIGVVSYELLTGSTPFNYET-LDMTYSSILACDTEDTVSFPS 243
+ D+WS+G + E++T F ++ +D + T D V +P
Sbjct: 187 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 234
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 83/167 (49%), Gaps = 18/167 (10%)
Query: 70 IVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGL 129
+V++ Y+ ++ +Y +MEY G +L++ P +A Y +L ++YLH
Sbjct: 71 LVDVLYN-EEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQ 128
Query: 130 GYVHRDIKPDNMLLSATGHLKLTDFGSATQV-----DKNGRIKSIVPVGTPEYVAPEVLE 184
G VH+DIKP N+LL+ G LK++ G A + D R G+P + PE+
Sbjct: 129 GIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQ----GSPAFQPPEI-- 182
Query: 185 WMEGNHGSDGYTG-SCDLWSIGVVSYELLTGSTPFNYETLDMTYSSI 230
+G D ++G D+WS GV Y + TG PF + + + +I
Sbjct: 183 ----ANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENI 225
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 75/144 (52%), Gaps = 16/144 (11%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
S ++ N VY + ++ G D +++ Q L++ +F IY++ + ++Y+H +HRD
Sbjct: 95 SLEEFNDVYLV-THLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRD 150
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV-LEWMEGNHGSDG 194
+KP N+ ++ LK+ DF A D + V T Y APE+ L WM
Sbjct: 151 LKPSNLAVNEDCELKILDFYLARHTDD----EMTGYVATRWYRAPEIMLNWMH------- 199
Query: 195 YTGSCDLWSIGVVSYELLTGSTPF 218
Y + D+WS+G + ELLTG T F
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 102/213 (47%), Gaps = 26/213 (12%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP---NTIERDIMVKSKC--PYI 70
DF+ + GN G ++ V K S K + E P N I R++ V +C PYI
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 71 VNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYL---H 127
V + +F + ME++ GG +L+ G + E + + + YL H
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKH 124
Query: 128 GLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVP--VGTPEYVAPEVLEW 185
+ +HRD+KP N+L+++ G +KL DFG + Q+ I S+ VGT Y++PE L
Sbjct: 125 KI--MHRDVKPSNILVNSRGEIKLCDFGVSGQL-----IDSMANSFVGTRSYMSPERL-- 175
Query: 186 MEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
+G H Y+ D+WS+G+ E+ G P
Sbjct: 176 -QGTH----YSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 102/213 (47%), Gaps = 26/213 (12%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP---NTIERDIMVKSKC--PYI 70
DF+ + GN G ++ V K S K + E P N I R++ V +C PYI
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 71 VNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYL---H 127
V + +F + ME++ GG +L+ G + E + + + YL H
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKH 124
Query: 128 GLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVP--VGTPEYVAPEVLEW 185
+ +HRD+KP N+L+++ G +KL DFG + Q+ I S+ VGT Y++PE L
Sbjct: 125 KI--MHRDVKPSNILVNSRGEIKLCDFGVSGQL-----IDSMANSFVGTRSYMSPERL-- 175
Query: 186 MEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
+G H Y+ D+WS+G+ E+ G P
Sbjct: 176 -QGTH----YSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 75/144 (52%), Gaps = 16/144 (11%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
S ++ N VY + ++ G D +++ Q L++ +F IY++ + ++Y+H +HRD
Sbjct: 95 SLEEFNDVYLV-THLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRD 150
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV-LEWMEGNHGSDG 194
+KP N+ ++ LK+ D G A D + V T Y APE+ L WM
Sbjct: 151 LKPSNLAVNEDCELKILDRGLARHTDD----EMTGYVATRWYRAPEIMLNWMH------- 199
Query: 195 YTGSCDLWSIGVVSYELLTGSTPF 218
Y + D+WS+G + ELLTG T F
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 75/144 (52%), Gaps = 16/144 (11%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
S ++ N VY + ++ G D +++ Q L++ +F IY++ + ++Y+H +HRD
Sbjct: 95 SLEEFNDVYLV-THLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRD 150
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV-LEWMEGNHGSDG 194
+KP N+ ++ LK+ D G A D + V T Y APE+ L WM
Sbjct: 151 LKPSNLAVNEDCELKILDGGLARHTDD----EMTGYVATRWYRAPEIMLNWMH------- 199
Query: 195 YTGSCDLWSIGVVSYELLTGSTPF 218
Y + D+WS+G + ELLTG T F
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 104/228 (45%), Gaps = 15/228 (6%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVL----REKMPNTIERDIMVKSKC--PYIVNLFYS 76
I +G +G +Y K + +KK+ E +P+T R+I + + P IV L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
N +Y + E++ D ++ + + Y+++L Q + + H +HRD+
Sbjct: 71 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 129
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYT 196
KP N+L++ G +KL DFG A R + V T Y APE+L G Y+
Sbjct: 130 KPQNLLINTEGAIKLADFGLARAFGVPVRTYT-HEVVTLWYRAPEILL------GCKYYS 182
Query: 197 GSCDLWSIGVVSYELLTGSTPFNYET-LDMTYSSILACDTEDTVSFPS 243
+ D+WS+G + E++T F ++ +D + T D V +P
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 230
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 104/228 (45%), Gaps = 15/228 (6%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVL----REKMPNTIERDIMVKSKC--PYIVNLFYS 76
I +G +G +Y K + +KK+ E +P+T R+I + + P IV L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
N +Y + E++ D ++ + + Y+++L Q + + H +HRD+
Sbjct: 70 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 128
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYT 196
KP N+L++ G +KL DFG A R + V T Y APE+L G Y+
Sbjct: 129 KPQNLLINTEGAIKLADFGLARAFGVPVRTYT-HEVVTLWYRAPEILL------GCKYYS 181
Query: 197 GSCDLWSIGVVSYELLTGSTPFNYET-LDMTYSSILACDTEDTVSFPS 243
+ D+WS+G + E++T F ++ +D + T D V +P
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 229
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 126/273 (46%), Gaps = 37/273 (13%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP---NTIERDIMVKSKC--PYI 70
DF+ + GN G ++ V K S K + E P N I R++ V +C PYI
Sbjct: 10 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 69
Query: 71 VNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYL---H 127
V + +F + ME++ GG +L+ G + E + + + YL H
Sbjct: 70 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKH 127
Query: 128 GLGYVHRDIKPDNMLLSATGHLKLTDFGSATQ-VDKNGRIKSIVPVGTPEYVAPEVLEWM 186
+ +HRD+KP N+L+++ G +KL DFG + Q +D+ VGT Y++PE L
Sbjct: 128 KI--MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEF----VGTRSYMSPERL--- 178
Query: 187 EGNHGSDGYTGSCDLWSIGVVSYELLTGSTP----FNYETLDMTYSSILACDTEDTVSFP 242
+G H Y+ D+WS+G+ E+ G P +E LD + E P
Sbjct: 179 QGTH----YSVQSDIWSMGLSLVEMAVGRYPRPPMAIFELLDYIVN-------EPPPKLP 227
Query: 243 SSIRLSTAMVNFV-QSLVQKLDARLNMDQVLGH 274
S++ S +FV + L++ R ++ Q++ H
Sbjct: 228 SAV-FSLEFQDFVNKCLIKNPAERADLKQLMVH 259
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 100/220 (45%), Gaps = 23/220 (10%)
Query: 14 ASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKV------LREKMPNTIERDIMVKSKC 67
A D+++ I G++G + K V K++ EK E +++ + K
Sbjct: 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKH 64
Query: 68 PYIVNLFYSFQDMNH--VYFIMEYVTGGDFVTLLE--NQPHGYLSESKARFYIYELAQAV 123
P IV + D + +Y +MEY GGD +++ + YL E + +L A+
Sbjct: 65 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL 124
Query: 124 QYLH-----GLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYV 178
+ H G +HRD+KP N+ L ++KL DFG A ++ + VGTP Y+
Sbjct: 125 KECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTF-VGTPYYM 183
Query: 179 APEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
+PE + M N S D+WS+G + YEL PF
Sbjct: 184 SPEQMNRMSYNEKS-------DIWSLGCLLYELCALMPPF 216
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 104/228 (45%), Gaps = 15/228 (6%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVL----REKMPNTIERDIMVKSKC--PYIVNLFYS 76
I +G +G +Y K + +KK+ E +P+T R+I + + P IV L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
N +Y + E++ D ++ + + Y+++L Q + + H +HRD+
Sbjct: 71 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHRVLHRDL 129
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYT 196
KP N+L++ G +KL DFG A R + V T Y APE+L G Y+
Sbjct: 130 KPQNLLINTEGAIKLADFGLARAFGVPVRTYT-HEVVTLWYRAPEILL------GCKYYS 182
Query: 197 GSCDLWSIGVVSYELLTGSTPFNYET-LDMTYSSILACDTEDTVSFPS 243
+ D+WS+G + E++T F ++ +D + T D V +P
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 230
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 104/228 (45%), Gaps = 15/228 (6%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVL----REKMPNTIERDIMVKSKC--PYIVNLFYS 76
I +G +G +Y K + +KK+ E +P+T R+I + + P IV L
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
N +Y + E+++ D ++ + + Y+++L Q + + H +HRD+
Sbjct: 73 IHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 131
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYT 196
KP N+L++ G +KL DFG A R V T Y APE+L G Y+
Sbjct: 132 KPQNLLINTEGAIKLADFGLARAFGVPVRTYX-HEVVTLWYRAPEILL------GCKYYS 184
Query: 197 GSCDLWSIGVVSYELLTGSTPFNYET-LDMTYSSILACDTEDTVSFPS 243
+ D+WS+G + E++T F ++ +D + T D V +P
Sbjct: 185 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 232
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 100/220 (45%), Gaps = 23/220 (10%)
Query: 14 ASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKV------LREKMPNTIERDIMVKSKC 67
A D+++ I G++G + K V K++ EK E +++ + K
Sbjct: 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKH 64
Query: 68 PYIVNLFYSFQDMNH--VYFIMEYVTGGDFVTLLE--NQPHGYLSESKARFYIYELAQAV 123
P IV + D + +Y +MEY GGD +++ + YL E + +L A+
Sbjct: 65 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL 124
Query: 124 QYLH-----GLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYV 178
+ H G +HRD+KP N+ L ++KL DFG A ++ + VGTP Y+
Sbjct: 125 KECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAF-VGTPYYM 183
Query: 179 APEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
+PE + M N S D+WS+G + YEL PF
Sbjct: 184 SPEQMNRMSYNEKS-------DIWSLGCLLYELCALMPPF 216
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 104/228 (45%), Gaps = 15/228 (6%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVL----REKMPNTIERDIMVKSKC--PYIVNLFYS 76
I +G +G +Y K + +KK+ E +P+T R+I + + P IV L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
N +Y + E++ D ++ + + Y+++L Q + + H +HRD+
Sbjct: 71 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 129
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYT 196
KP N+L++ G +KL DFG A R + V T Y APE+L G Y+
Sbjct: 130 KPQNLLINTEGAIKLADFGLARAFGVPVRTYT-HEVVTLWYRAPEILL------GXKYYS 182
Query: 197 GSCDLWSIGVVSYELLTGSTPFNYET-LDMTYSSILACDTEDTVSFPS 243
+ D+WS+G + E++T F ++ +D + T D V +P
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 230
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 104/228 (45%), Gaps = 15/228 (6%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVL----REKMPNTIERDIMVKSKC--PYIVNLFYS 76
I +G +G +Y K + +KK+ E +P+T R+I + + P IV L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
N +Y + E++ D ++ + + Y+++L Q + + H +HRD+
Sbjct: 72 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 130
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYT 196
KP N+L++ G +KL DFG A R + V T Y APE+L G Y+
Sbjct: 131 KPQNLLINTEGAIKLADFGLARAFGVPVRTYT-HEVVTLWYRAPEILL------GCKYYS 183
Query: 197 GSCDLWSIGVVSYELLTGSTPFNYET-LDMTYSSILACDTEDTVSFPS 243
+ D+WS+G + E++T F ++ +D + T D V +P
Sbjct: 184 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 231
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 104/228 (45%), Gaps = 15/228 (6%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVL----REKMPNTIERDIMVKSKC--PYIVNLFYS 76
I +G +G +Y K + +KK+ E +P+T R+I + + P IV L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
N +Y + E++ D ++ + + Y+++L Q + + H +HRD+
Sbjct: 70 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 128
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYT 196
KP N+L++ G +KL DFG A R + V T Y APE+L G Y+
Sbjct: 129 KPQNLLINTEGAIKLADFGLARAFGVPVRTYT-HEVVTLWYRAPEILL------GCKYYS 181
Query: 197 GSCDLWSIGVVSYELLTGSTPFNYET-LDMTYSSILACDTEDTVSFPS 243
+ D+WS+G + E++T F ++ +D + T D V +P
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 229
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 98/202 (48%), Gaps = 16/202 (7%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVLREK----MPNTIERDIMVKSKCPY--IVNLFYS 76
I +G +G +Y + TF +KK+ EK +P+T R+I + + + IV L+
Sbjct: 10 IGEGTYGVVYKAQNNYG-ETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
+ + E++ D LL+ G L A+ ++ +L + Y H +HRD+
Sbjct: 69 IHTKKRLVLVFEHLDQ-DLKKLLD-VCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDL 126
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYT 196
KP N+L++ G LK+ DFG A R K V T Y AP+VL GS Y+
Sbjct: 127 KPQNLLINREGELKIADFGLARAFGIPVR-KYTHEVVTLWYRAPDVL------MGSKKYS 179
Query: 197 GSCDLWSIGVVSYELLTGSTPF 218
+ D+WS+G + E++ G+ F
Sbjct: 180 TTIDIWSVGCIFAEMVNGAPLF 201
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 104/228 (45%), Gaps = 15/228 (6%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVL----REKMPNTIERDIMVKSKC--PYIVNLFYS 76
I +G +G +Y K + +KK+ E +P+T R+I + + P IV L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
N +Y + E+++ D ++ + + Y+++L Q + + H +HRD+
Sbjct: 74 IHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 132
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYT 196
KP N+L++ G +KL DFG A R V T Y APE+L G Y+
Sbjct: 133 KPQNLLINTEGAIKLADFGLARAFGVPVRTYX-HEVVTLWYRAPEILL------GCKYYS 185
Query: 197 GSCDLWSIGVVSYELLTGSTPFNYET-LDMTYSSILACDTEDTVSFPS 243
+ D+WS+G + E++T F ++ +D + T D V +P
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 233
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 104/228 (45%), Gaps = 15/228 (6%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVL----REKMPNTIERDIMVKSKC--PYIVNLFYS 76
I +G +G +Y K + +KK+ E +P+T R+I + + P IV L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
N +Y + E++ D ++ + + Y+++L Q + + H +HRD+
Sbjct: 71 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 129
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYT 196
KP N+L++ G +KL DFG A R + V T Y APE+L G Y+
Sbjct: 130 KPQNLLINTEGAIKLADFGLARAFGVPVRTYT-HEVVTLWYRAPEILL------GCKYYS 182
Query: 197 GSCDLWSIGVVSYELLTGSTPFNYET-LDMTYSSILACDTEDTVSFPS 243
+ D+WS+G + E++T F ++ +D + T D V +P
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 230
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 104/228 (45%), Gaps = 15/228 (6%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVL----REKMPNTIERDIMVKSKC--PYIVNLFYS 76
I +G +G +Y K + +KK+ E +P+T R+I + + P IV L
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
N +Y + E++ D ++ + + Y+++L Q + + H +HRD+
Sbjct: 73 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 131
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYT 196
KP+N+L++ G +KL DFG A R V T Y APE+L G Y+
Sbjct: 132 KPENLLINTEGAIKLADFGLARAFGVPVRTYX-HEVVTLWYRAPEILL------GCKYYS 184
Query: 197 GSCDLWSIGVVSYELLTGSTPFNYET-LDMTYSSILACDTEDTVSFPS 243
+ D+WS+G + E++T F ++ +D + T D V +P
Sbjct: 185 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 232
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 98/202 (48%), Gaps = 16/202 (7%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVLREK----MPNTIERDIMVKSKCPY--IVNLFYS 76
I +G +G +Y + TF +KK+ EK +P+T R+I + + + IV L+
Sbjct: 10 IGEGTYGVVYKAQNNYG-ETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
+ + E++ D LL+ G L A+ ++ +L + Y H +HRD+
Sbjct: 69 IHTKKRLVLVFEHLDQ-DLKKLLD-VCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDL 126
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYT 196
KP N+L++ G LK+ DFG A R K V T Y AP+VL GS Y+
Sbjct: 127 KPQNLLINREGELKIADFGLARAFGIPVR-KYTHEVVTLWYRAPDVL------MGSKKYS 179
Query: 197 GSCDLWSIGVVSYELLTGSTPF 218
+ D+WS+G + E++ G+ F
Sbjct: 180 TTIDIWSVGCIFAEMVNGTPLF 201
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 103/228 (45%), Gaps = 15/228 (6%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVL----REKMPNTIERDIMVKSKC--PYIVNLFYS 76
I +G +G +Y K + +KK+ E +P+T R+I + + P IV L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
N +Y + E+V D ++ + + Y+++L Q + + H +HRD+
Sbjct: 74 IHTENKLYLVFEHVDQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 132
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYT 196
KP N+L++ G +KL DFG A R V T Y APE+L G Y+
Sbjct: 133 KPQNLLINTEGAIKLADFGLARAFGVPVRTYX-HEVVTLWYRAPEILL------GCKYYS 185
Query: 197 GSCDLWSIGVVSYELLTGSTPFNYET-LDMTYSSILACDTEDTVSFPS 243
+ D+WS+G + E++T F ++ +D + T D V +P
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 233
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 104/228 (45%), Gaps = 15/228 (6%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVL----REKMPNTIERDIMVKSKC--PYIVNLFYS 76
I +G +G +Y K + +KK+ E +P+T R+I + + P IV L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
N +Y + E++ D ++ + + Y+++L Q + + H +HRD+
Sbjct: 72 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 130
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYT 196
KP+N+L++ G +KL DFG A R V T Y APE+L G Y+
Sbjct: 131 KPENLLINTEGAIKLADFGLARAFGVPVRTYX-HEVVTLWYRAPEILL------GCKYYS 183
Query: 197 GSCDLWSIGVVSYELLTGSTPFNYET-LDMTYSSILACDTEDTVSFPS 243
+ D+WS+G + E++T F ++ +D + T D V +P
Sbjct: 184 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 231
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 104/228 (45%), Gaps = 15/228 (6%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVL----REKMPNTIERDIMVKSKC--PYIVNLFYS 76
I +G +G +Y K + +KK+ E +P+T R+I + + P IV L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
N +Y + E++ D ++ + + Y+++L Q + + H +HRD+
Sbjct: 71 IHTENKLYLVFEFLHQ-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 129
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYT 196
KP+N+L++ G +KL DFG A R V T Y APE+L G Y+
Sbjct: 130 KPENLLINTEGAIKLADFGLARAFGVPVRTYX-HEVVTLWYRAPEILL------GCKYYS 182
Query: 197 GSCDLWSIGVVSYELLTGSTPFNYET-LDMTYSSILACDTEDTVSFPS 243
+ D+WS+G + E++T F ++ +D + T D V +P
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 230
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 104/228 (45%), Gaps = 15/228 (6%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVL----REKMPNTIERDIMVKSKC--PYIVNLFYS 76
I +G +G +Y K + +KK+ E +P+T R+I + + P IV L
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 77
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
N +Y + E++ D ++ + + Y+++L Q + + H +HRD+
Sbjct: 78 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 136
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYT 196
KP N+L++ G +KL DFG A R + V T Y APE+L G Y+
Sbjct: 137 KPQNLLINTEGAIKLADFGLARAFGVPVRTYT-HEVVTLWYRAPEILL------GCKYYS 189
Query: 197 GSCDLWSIGVVSYELLTGSTPFNYET-LDMTYSSILACDTEDTVSFPS 243
+ D+WS+G + E++T F ++ +D + T D V +P
Sbjct: 190 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 237
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 15/228 (6%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVL----REKMPNTIERDIMVKSKC--PYIVNLFYS 76
I +G +G +Y K + +KK+ E +P+T R+I + + P IV L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
N +Y + E++ D ++ + + Y+++L Q + + H +HRD+
Sbjct: 71 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 129
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYT 196
KP N+L++ G +KL DFG A R V T Y APE+L G Y+
Sbjct: 130 KPQNLLINTEGAIKLADFGLARAFGVPVRTYX-HEVVTLWYRAPEILL------GCKYYS 182
Query: 197 GSCDLWSIGVVSYELLTGSTPFNYET-LDMTYSSILACDTEDTVSFPS 243
+ D+WS+G + E++T F ++ +D + T D V +P
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 230
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 104/228 (45%), Gaps = 15/228 (6%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVL----REKMPNTIERDIMVKSKC--PYIVNLFYS 76
I +G +G +Y K + +KK+ E +P+T R+I + + P IV L
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 77
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
N +Y + E++ D ++ + + Y+++L Q + + H +HRD+
Sbjct: 78 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 136
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYT 196
KP N+L++ G +KL DFG A R + V T Y APE+L G Y+
Sbjct: 137 KPQNLLINTEGAIKLADFGLARAFGVPVRTYT-HEVVTLWYRAPEILL------GXKYYS 189
Query: 197 GSCDLWSIGVVSYELLTGSTPFNYET-LDMTYSSILACDTEDTVSFPS 243
+ D+WS+G + E++T F ++ +D + T D V +P
Sbjct: 190 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 237
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 98/202 (48%), Gaps = 16/202 (7%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVLREK----MPNTIERDIMVKSKCPY--IVNLFYS 76
I +G +G +Y + TF +KK+ EK +P+T R+I + + + IV L+
Sbjct: 10 IGEGTYGVVYKAQNNYG-ETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
+ + E++ D LL+ G L A+ ++ +L + Y H +HRD+
Sbjct: 69 IHTKKRLVLVFEHLDQ-DLKKLLD-VCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDL 126
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYT 196
KP N+L++ G LK+ DFG A R K + T Y AP+VL GS Y+
Sbjct: 127 KPQNLLINREGELKIADFGLARAFGIPVR-KYTHEIVTLWYRAPDVL------MGSKKYS 179
Query: 197 GSCDLWSIGVVSYELLTGSTPF 218
+ D+WS+G + E++ G+ F
Sbjct: 180 TTIDIWSVGCIFAEMVNGTPLF 201
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 15/228 (6%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVL----REKMPNTIERDIMVKSKC--PYIVNLFYS 76
I +G +G +Y K + +KK+ E +P+T R+I + + P IV L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
N +Y + E++ D ++ + + Y+++L Q + + H +HRD+
Sbjct: 71 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 129
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYT 196
KP N+L++ G +KL DFG A R V T Y APE+L G Y+
Sbjct: 130 KPQNLLINTEGAIKLADFGLARAFGVPVRTYX-HEVVTLWYRAPEILL------GCKYYS 182
Query: 197 GSCDLWSIGVVSYELLTGSTPFNYET-LDMTYSSILACDTEDTVSFPS 243
+ D+WS+G + E++T F ++ +D + T D V +P
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 230
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 15/228 (6%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVL----REKMPNTIERDIMVKSKC--PYIVNLFYS 76
I +G +G +Y K + +KK+ E +P+T R+I + + P IV L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
N +Y + E++ D ++ + + Y+++L Q + + H +HRD+
Sbjct: 71 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 129
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYT 196
KP N+L++ G +KL DFG A R V T Y APE+L G Y+
Sbjct: 130 KPQNLLINTEGAIKLADFGLARAFGVPVRTYX-HEVVTLWYRAPEILL------GCKYYS 182
Query: 197 GSCDLWSIGVVSYELLTGSTPFNYET-LDMTYSSILACDTEDTVSFPS 243
+ D+WS+G + E++T F ++ +D + T D V +P
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 230
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 15/228 (6%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVL----REKMPNTIERDIMVKSKC--PYIVNLFYS 76
I +G +G +Y K + +KK+ E +P+T R+I + + P IV L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
N +Y + E++ D ++ + + Y+++L Q + + H +HRD+
Sbjct: 70 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 128
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYT 196
KP N+L++ G +KL DFG A R V T Y APE+L G Y+
Sbjct: 129 KPQNLLINTEGAIKLADFGLARAFGVPVRTYX-HEVVTLWYRAPEILL------GCKYYS 181
Query: 197 GSCDLWSIGVVSYELLTGSTPFNYET-LDMTYSSILACDTEDTVSFPS 243
+ D+WS+G + E++T F ++ +D + T D V +P
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 229
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 15/228 (6%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVL----REKMPNTIERDIMVKSKC--PYIVNLFYS 76
I +G +G +Y K + +KK+ E +P+T R+I + + P IV L
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
N +Y + E++ D ++ + + Y+++L Q + + H +HRD+
Sbjct: 73 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 131
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYT 196
KP N+L++ G +KL DFG A R V T Y APE+L G Y+
Sbjct: 132 KPQNLLINTEGAIKLADFGLARAFGVPVRTYX-HEVVTLWYRAPEILL------GCKYYS 184
Query: 197 GSCDLWSIGVVSYELLTGSTPFNYET-LDMTYSSILACDTEDTVSFPS 243
+ D+WS+G + E++T F ++ +D + T D V +P
Sbjct: 185 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 232
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 15/228 (6%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVL----REKMPNTIERDIMVKSKC--PYIVNLFYS 76
I +G +G +Y K + +KK+ E +P+T R+I + + P IV L
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 74
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
N +Y + E++ D ++ + + Y+++L Q + + H +HRD+
Sbjct: 75 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 133
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYT 196
KP N+L++ G +KL DFG A R V T Y APE+L G Y+
Sbjct: 134 KPQNLLINTEGAIKLADFGLARAFGVPVRTYX-HEVVTLWYRAPEILL------GCKYYS 186
Query: 197 GSCDLWSIGVVSYELLTGSTPFNYET-LDMTYSSILACDTEDTVSFPS 243
+ D+WS+G + E++T F ++ +D + T D V +P
Sbjct: 187 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 234
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 15/228 (6%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVL----REKMPNTIERDIMVKSKC--PYIVNLFYS 76
I +G +G +Y K + +KK+ E +P+T R+I + + P IV L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
N +Y + E++ D ++ + + Y+++L Q + + H +HRD+
Sbjct: 72 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 130
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYT 196
KP N+L++ G +KL DFG A R V T Y APE+L G Y+
Sbjct: 131 KPQNLLINTEGAIKLADFGLARAFGVPVRTYX-HEVVTLWYRAPEILL------GCKYYS 183
Query: 197 GSCDLWSIGVVSYELLTGSTPFNYET-LDMTYSSILACDTEDTVSFPS 243
+ D+WS+G + E++T F ++ +D + T D V +P
Sbjct: 184 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 231
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 15/228 (6%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVL----REKMPNTIERDIMVKSKC--PYIVNLFYS 76
I +G +G +Y K + +KK+ E +P+T R+I + + P IV L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
N +Y + E++ D ++ + + Y+++L Q + + H +HRD+
Sbjct: 71 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 129
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYT 196
KP N+L++ G +KL DFG A R V T Y APE+L G Y+
Sbjct: 130 KPQNLLINTEGAIKLADFGLARAFGVPVRTYX-HEVVTLWYRAPEILL------GCKYYS 182
Query: 197 GSCDLWSIGVVSYELLTGSTPFNYET-LDMTYSSILACDTEDTVSFPS 243
+ D+WS+G + E++T F ++ +D + T D V +P
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 230
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 15/228 (6%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVL----REKMPNTIERDIMVKSKC--PYIVNLFYS 76
I +G +G +Y K + +KK+ E +P+T R+I + + P IV L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
N +Y + E++ D ++ + + Y+++L Q + + H +HRD+
Sbjct: 70 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 128
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYT 196
KP N+L++ G +KL DFG A R V T Y APE+L G Y+
Sbjct: 129 KPQNLLINTEGAIKLADFGLARAFGVPVRTYX-HEVVTLWYRAPEILL------GCKYYS 181
Query: 197 GSCDLWSIGVVSYELLTGSTPFNYET-LDMTYSSILACDTEDTVSFPS 243
+ D+WS+G + E++T F ++ +D + T D V +P
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 229
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 15/228 (6%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVL----REKMPNTIERDIMVKSKC--PYIVNLFYS 76
I +G +G +Y K + +KK+ E +P+T R+I + + P IV L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
N +Y + E++ D ++ + + Y+++L Q + + H +HRD+
Sbjct: 74 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 132
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYT 196
KP N+L++ G +KL DFG A R V T Y APE+L G Y+
Sbjct: 133 KPQNLLINTEGAIKLADFGLARAFGVPVRTYX-HEVVTLWYRAPEILL------GCKYYS 185
Query: 197 GSCDLWSIGVVSYELLTGSTPFNYET-LDMTYSSILACDTEDTVSFPS 243
+ D+WS+G + E++T F ++ +D + T D V +P
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 233
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 15/228 (6%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVL----REKMPNTIERDIMVKSKC--PYIVNLFYS 76
I +G +G +Y K + +KK+ E +P+T R+I + + P IV L
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
N +Y + E++ D ++ + + Y+++L Q + + H +HRD+
Sbjct: 73 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 131
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYT 196
KP N+L++ G +KL DFG A R V T Y APE+L G Y+
Sbjct: 132 KPQNLLINTEGAIKLADFGLARAFGVPVRTYX-HEVVTLWYRAPEILL------GCKYYS 184
Query: 197 GSCDLWSIGVVSYELLTGSTPFNYET-LDMTYSSILACDTEDTVSFPS 243
+ D+WS+G + E++T F ++ +D + T D V +P
Sbjct: 185 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 232
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 15/228 (6%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVL----REKMPNTIERDIMVKSKC--PYIVNLFYS 76
I +G +G +Y K + +KK+ E +P+T R+I + + P IV L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
N +Y + E++ D ++ + + Y+++L Q + + H +HRD+
Sbjct: 74 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 132
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYT 196
KP N+L++ G +KL DFG A R V T Y APE+L G Y+
Sbjct: 133 KPQNLLINTEGAIKLADFGLARAFGVPVRTYX-HEVVTLWYRAPEILL------GCKYYS 185
Query: 197 GSCDLWSIGVVSYELLTGSTPFNYET-LDMTYSSILACDTEDTVSFPS 243
+ D+WS+G + E++T F ++ +D + T D V +P
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 233
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 103/210 (49%), Gaps = 17/210 (8%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMK-----KVLREKMPNTIERDIMVKSKCPYIVNLFYSF 77
+ QG +++ K++ + F +K LR E +++ K IV LF
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIE 76
Query: 78 QDMN--HVYFIMEYVTGGDFVTLLENQPHGY-LSESKARFYIYELAQAVQYLHGLGYVHR 134
++ H IME+ G T+LE + Y L ES+ + ++ + +L G VHR
Sbjct: 77 EETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHR 136
Query: 135 DIKPDNML--LSATGH--LKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLE--WMEG 188
+IKP N++ + G KLTDFG+A +++ + + S+ GT EY+ P++ E +
Sbjct: 137 NIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLY--GTEEYLHPDMYERAVLRK 194
Query: 189 NHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
+H Y + DLWSIGV Y TGS PF
Sbjct: 195 DH-QKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 15/228 (6%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVL----REKMPNTIERDIMVKSKC--PYIVNLFYS 76
I +G +G +Y K + +KK+ E +P+T R+I + + P IV L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
N +Y + E++ D ++ + + Y+++L Q + + H +HRD+
Sbjct: 72 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 130
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYT 196
KP N+L++ G +KL DFG A R V T Y APE+L G Y+
Sbjct: 131 KPQNLLINTEGAIKLADFGLARAFGVPVRTYX-HEVVTLWYRAPEILL------GCKYYS 183
Query: 197 GSCDLWSIGVVSYELLTGSTPFNYET-LDMTYSSILACDTEDTVSFPS 243
+ D+WS+G + E++T F ++ +D + T D V +P
Sbjct: 184 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 231
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 100/220 (45%), Gaps = 23/220 (10%)
Query: 14 ASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKV------LREKMPNTIERDIMVKSKC 67
A D+++ I G++G + K V K++ EK E +++ + K
Sbjct: 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKH 64
Query: 68 PYIVNLFYSFQDMNH--VYFIMEYVTGGDFVTLLE--NQPHGYLSESKARFYIYELAQAV 123
P IV + D + +Y +MEY GGD +++ + YL E + +L A+
Sbjct: 65 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL 124
Query: 124 QYLH-----GLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYV 178
+ H G +HRD+KP N+ L ++KL DFG A ++ + VGTP Y+
Sbjct: 125 KECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEF-VGTPYYM 183
Query: 179 APEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
+PE + M N S D+WS+G + YEL PF
Sbjct: 184 SPEQMNRMSYNEKS-------DIWSLGCLLYELCALMPPF 216
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 88/177 (49%), Gaps = 23/177 (12%)
Query: 45 MKKVLREKMPNTIE-RDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQP 103
++ +LR + N I RDI+ S + + M VY + + + D LL++Q
Sbjct: 92 IQILLRFRHENVIGIRDILRAS----------TLEAMRDVYIVQDLMET-DLYKLLKSQ- 139
Query: 104 HGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKN 163
LS +++Y++ + ++Y+H +HRD+KP N+L++ T LK+ DFG A D
Sbjct: 140 --QLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPE 197
Query: 164 GRIKSIVP--VGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
+ V T Y APE++ S GYT S D+WS+G + E+L+ F
Sbjct: 198 HDHTGFLTEXVATRWYRAPEIML------NSKGYTKSIDIWSVGCILAEMLSNRPIF 248
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 122/270 (45%), Gaps = 29/270 (10%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVL-----REKMPNTIERDIMVKSK-CPYIVNLFYS 76
I +G +G + + K S +K++ +E+ ++ D++++S CPYIV + +
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGA 89
Query: 77 FQDMNHVYFIMEYVTGG--DFVTLLENQPHGYLSESKARFYIYELAQAVQYL-HGLGYVH 133
+ ME ++ F + + + E +A+ +L L +H
Sbjct: 90 LFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIH 149
Query: 134 RDIKPDNMLLSATGHLKLTDFGSATQ-VDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGS 192
RDIKP N+LL +G++KL DFG + Q VD + + G Y+APE + + +
Sbjct: 150 RDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRD---AGCRPYMAPERI---DPSASR 203
Query: 193 DGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSI------R 246
GY D+WS+G+ YEL TG P+ ++S+ T+ P +
Sbjct: 204 QGYDVRSDVWSLGITLYELATGRFPYP------KWNSVFDQLTQVVKGDPPQLSNSEERE 257
Query: 247 LSTAMVNFVQSLVQKLDA-RLNMDQVLGHP 275
S + +NFV + K ++ R ++L HP
Sbjct: 258 FSPSFINFVNLCLTKDESKRPKYKELLKHP 287
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 103/213 (48%), Gaps = 29/213 (13%)
Query: 4 VKELRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVL------REKMPNTI 57
+ +L ++ A +++K I G G IYL ++ + V+ K L +
Sbjct: 69 LPQLNPGDIVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMA 128
Query: 58 ERDIMVKSKCPYIVNLFYSFQDMNH-----VYFIMEYVTGGDFVTLLENQPHGYLSESKA 112
ER + + P IV +F + + Y +MEYV GG + + Q L ++A
Sbjct: 129 ERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYV-GGQSLKRSKGQ---KLPVAEA 184
Query: 113 RFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPV 172
Y+ E+ A+ YLH +G V+ D+KP+N++L+ LKL D G+ ++++ G +
Sbjct: 185 IAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRINSFGYLY----- 238
Query: 173 GTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIG 205
GTP + APE++ G T + D++++G
Sbjct: 239 GTPGFQAPEIVR--------TGPTVATDIYTVG 263
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 103/228 (45%), Gaps = 15/228 (6%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVL----REKMPNTIERDIMVKSKC--PYIVNLFYS 76
I +G +G +Y K + + K+ E +P+T R+I + + P IV L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
N +Y + E++ D ++ + + Y+++L Q + + H +HRD+
Sbjct: 71 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 129
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYT 196
KP N+L++ G +KL DFG A R + V T Y APE+L G Y+
Sbjct: 130 KPQNLLINTEGAIKLADFGLARAFGVPVRTYT-HEVVTLWYRAPEILL------GCKYYS 182
Query: 197 GSCDLWSIGVVSYELLTGSTPFNYET-LDMTYSSILACDTEDTVSFPS 243
+ D+WS+G + E++T F ++ +D + T D V +P
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 230
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 103/228 (45%), Gaps = 15/228 (6%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVL----REKMPNTIERDIMVKSKC--PYIVNLFYS 76
I +G +G +Y K + + K+ E +P+T R+I + + P IV L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
N +Y + E++ D ++ + + Y+++L Q + + H +HRD+
Sbjct: 70 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 128
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYT 196
KP N+L++ G +KL DFG A R + V T Y APE+L G Y+
Sbjct: 129 KPQNLLINTEGAIKLADFGLARAFGVPVRTYT-HEVVTLWYRAPEILL------GCKYYS 181
Query: 197 GSCDLWSIGVVSYELLTGSTPFNYET-LDMTYSSILACDTEDTVSFPS 243
+ D+WS+G + E++T F ++ +D + T D V +P
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 229
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 84/169 (49%), Gaps = 17/169 (10%)
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
S ++N VY + EY+ D +LE P L E AR ++Y+L + ++Y+H +HRD
Sbjct: 90 SLTELNSVYIVQEYMET-DLANVLEQGP---LLEEHARLFMYQLLRGLKYIHSANVLHRD 145
Query: 136 IKPDNMLLSATGH-LKLTDFGSATQVDKNGRIKSIVPVG--TPEYVAPEVLEWMEGNHGS 192
+KP N+ ++ LK+ DFG A +D + K + G T Y +P +L
Sbjct: 146 LKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLL------SP 199
Query: 193 DGYTGSCDLWSIGVVSYELLTGSTPF----NYETLDMTYSSILACDTED 237
+ YT + D+W+ G + E+LTG T F E + + SI ED
Sbjct: 200 NNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEED 248
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 19/206 (9%)
Query: 22 FIQQGNFGDIYLVEEKQSHNTFVMKKV---LREKMPNTIERDIMVKSKC------PYIVN 72
F+ +G F +Y +K ++ +KK+ R + + I R + + K P I+
Sbjct: 17 FLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIG 76
Query: 73 LFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYV 132
L +F +++ + +++ V + +N L+ S + Y+ Q ++YLH +
Sbjct: 77 LLDAFGHKSNISLVFDFMETDLEVIIKDNS--LVLTPSHIKAYMLMTLQGLEYLHQHWIL 134
Query: 133 HRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGS 192
HRD+KP+N+LL G LKL DFG A R V T Y APE+L G+
Sbjct: 135 HRDLKPNNLLLDENGVLKLADFGLAKSFGSPNR-AYXHQVVTRWYRAPELL------FGA 187
Query: 193 DGYTGSCDLWSIGVVSYELLTGSTPF 218
Y D+W++G + ELL PF
Sbjct: 188 RMYGVGVDMWAVGCILAELLL-RVPF 212
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 102/210 (48%), Gaps = 17/210 (8%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMK-----KVLREKMPNTIERDIMVKSKCPYIVNLFYSF 77
+ QG +++ K++ + F +K LR E +++ K IV LF
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIE 76
Query: 78 QDMN--HVYFIMEYVTGGDFVTLLENQPHGY-LSESKARFYIYELAQAVQYLHGLGYVHR 134
++ H IME+ G T+LE + Y L ES+ + ++ + +L G VHR
Sbjct: 77 EETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHR 136
Query: 135 DIKPDNML--LSATGH--LKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLE--WMEG 188
+IKP N++ + G KLTDFG+A +++ + + + GT EY+ P++ E +
Sbjct: 137 NIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLY--GTEEYLHPDMYERAVLRK 194
Query: 189 NHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
+H Y + DLWSIGV Y TGS PF
Sbjct: 195 DH-QKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 69/142 (48%), Gaps = 17/142 (11%)
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
FQD VY +ME + L H L + + +Y++ +++LH G +HRD+
Sbjct: 101 FQD---VYLVMELMDAN-----LCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDL 152
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYT 196
KP N+++ + LK+ DFG A N + V T Y APEV+ M GY
Sbjct: 153 KPSNIVVKSDCTLKILDFGLARTACTNFMMTPY--VVTRYYRAPEVILGM-------GYA 203
Query: 197 GSCDLWSIGVVSYELLTGSTPF 218
+ D+WS+G + EL+ G F
Sbjct: 204 ANVDIWSVGCIMGELVKGCVIF 225
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 107/230 (46%), Gaps = 38/230 (16%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGD----IYLVEE-----------KQSHNTFVMKKVLREK 52
R + ++ R I +G FGD IY+ E K + V +K L+E
Sbjct: 383 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEA 442
Query: 53 MPNTIERDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKA 112
+ M + P+IV L + N V+ IME T G+ + L+ + L +
Sbjct: 443 L-------TMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFS-LDLASL 493
Query: 113 RFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSI--- 169
Y Y+L+ A+ YL +VHRDI N+L+SAT +KL DFG + ++ + K+
Sbjct: 494 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGK 553
Query: 170 VPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
+P+ +++APE + + +T + D+W GV +E+L G PF
Sbjct: 554 LPI---KWMAPESINFRR-------FTSASDVWMFGVCMWEILMHGVKPF 593
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 108/239 (45%), Gaps = 45/239 (18%)
Query: 10 KNVSASD-FDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLR--EKMPNT--IERDIMV- 63
KNV D ++IK I +G++G +YL +K ++ +KKV R E + + I R+I +
Sbjct: 22 KNVKVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITIL 81
Query: 64 -KSKCPYIVNLF-----YSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIY 117
+ K YI+ L + +Y ++E + D L + +L+E + +Y
Sbjct: 82 NRLKSDYIIRLHDLIIPEDLLKFDELYIVLE-IADSDLKKLFKTP--IFLTEQHVKTILY 138
Query: 118 ELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSI-------- 169
L +++H G +HRD+KP N LL+ +K+ DFG A ++ + I +
Sbjct: 139 NLLLGEKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEE 198
Query: 170 --VP--------------VGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELL 212
P V T Y APE++ E YT S D+WS G + ELL
Sbjct: 199 NEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQE------NYTNSIDIWSTGCIFAELL 251
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 70/142 (49%), Gaps = 17/142 (11%)
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
FQD VY +ME + L H L + + +Y++ +++LH G +HRD+
Sbjct: 99 FQD---VYLVMELMDAN-----LCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDL 150
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYT 196
KP N+++ + LK+ DFG A N + V T Y APEV+ M GY
Sbjct: 151 KPSNIVVKSDCTLKILDFGLARTASTNFMMTPY--VVTRYYRAPEVILGM-------GYK 201
Query: 197 GSCDLWSIGVVSYELLTGSTPF 218
+ D+WS+G + EL+ GS F
Sbjct: 202 ENVDIWSVGCIMGELVKGSVIF 223
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 105/221 (47%), Gaps = 21/221 (9%)
Query: 22 FIQQGNFGDIYLVEEKQSHNTFVMKKVLR---EKMPNTIE-RDIMVKSKCPY--IVNLFY 75
+ +G++G + K + +KK L +KM I R+I + + + +VNL
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLE 91
Query: 76 SFQDMNHVYFIMEYVTGGDFVTL--LENQPHGYLSESKARFYIYELAQAVQYLHGLGYVH 133
+ Y + E+V D L LE P+G L + Y++++ + + H +H
Sbjct: 92 VCKKKKRWYLVFEFV---DHTILDDLELFPNG-LDYQVVQKYLFQIINGIGFCHSHNIIH 147
Query: 134 RDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSD 193
RDIKP+N+L+S +G +KL DFG A + G + V T Y APE+L G
Sbjct: 148 RDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYD-DEVATRWYRAPELLV------GDV 200
Query: 194 GYTGSCDLWSIGVVSYELLTGSTPFNYET-LDMTYSSILAC 233
Y + D+W+IG + E+ G F ++ +D Y I+ C
Sbjct: 201 KYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLY-HIMMC 240
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 105/225 (46%), Gaps = 28/225 (12%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGD----IYLVEEKQSHNTFV------MKKVLREKMPNTI 57
R + ++ R I +G FGD IY+ E + + +REK
Sbjct: 3 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ-- 60
Query: 58 ERDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIY 117
E M + P+IV L + N V+ IME T G+ + L+ + L + Y Y
Sbjct: 61 EALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFS-LDLASLILYAY 118
Query: 118 ELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSI---VPVGT 174
+L+ A+ YL +VHRDI N+L+SAT +KL DFG + ++ + K+ +P+
Sbjct: 119 QLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPI-- 176
Query: 175 PEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
+++APE + + +T + D+W GV +E+L G PF
Sbjct: 177 -KWMAPESINFRR-------FTSASDVWMFGVCMWEILMHGVKPF 213
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 94/205 (45%), Gaps = 25/205 (12%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVLR-----EKMPNTIERDIMVKSKC-----PYIVN 72
I +G +G ++ + ++ FV K +R E MP + R++ V P +V
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 73 LF----YSFQDM-NHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLH 127
LF S D + + E+V D T L+ P + + +++L + + +LH
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH 137
Query: 128 GLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWME 187
VHRD+KP N+L++++G +KL DFG A + S+ V T Y APEVL
Sbjct: 138 SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSV--VVTLWYRAPEVLL--- 192
Query: 188 GNHGSDGYTGSCDLWSIGVVSYELL 212
Y DLWS+G + E+
Sbjct: 193 ----QSSYATPVDLWSVGCIFAEMF 213
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 101/244 (41%), Gaps = 45/244 (18%)
Query: 17 FDIKRFIQQGNFGDIYLVEEK---QSHNTFVMKKVLREKMPNTIERDI---MVKSKCPYI 70
F I+ I +G F +YL + +K ++ P I ++ V +
Sbjct: 23 FKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVAGGQDNV 82
Query: 71 VNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLG 130
+ + Y F+ +HV M Y+ F+ +L + LS + R Y+ L +A++ +H G
Sbjct: 83 MGVKYCFRKNDHVVIAMPYLEHESFLDILNS-----LSFQEVREYMLNLFKALKRIHQFG 137
Query: 131 YVHRDIKPDNMLLS-ATGHLKLTDFGSAT--------------------QVDKN------ 163
VHRD+KP N L + L DFG A + +N
Sbjct: 138 IVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICL 197
Query: 164 GRIKSIVP-VGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYET 222
R + + P GTP + APEVL T + D+WS GV+ LL+G PF +
Sbjct: 198 SRRQQVAPRAGTPGFRAPEVLTKCPNQ------TTAIDMWSAGVIFLSLLSGRYPFYKAS 251
Query: 223 LDMT 226
D+T
Sbjct: 252 DDLT 255
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 94/205 (45%), Gaps = 25/205 (12%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVLR-----EKMPNTIERDIMVKSKC-----PYIVN 72
I +G +G ++ + ++ FV K +R E MP + R++ V P +V
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 73 LF----YSFQDM-NHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLH 127
LF S D + + E+V D T L+ P + + +++L + + +LH
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH 137
Query: 128 GLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWME 187
VHRD+KP N+L++++G +KL DFG A + S+V T Y APEVL
Sbjct: 138 SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV--TLWYRAPEVLL--- 192
Query: 188 GNHGSDGYTGSCDLWSIGVVSYELL 212
Y DLWS+G + E+
Sbjct: 193 ----QSSYATPVDLWSVGCIFAEMF 213
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 104/219 (47%), Gaps = 21/219 (9%)
Query: 11 NVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREK-----MPNTIERD--IMV 63
++ D +IK I G+FG ++ E H + V K+L E+ N R+ IM
Sbjct: 33 DIPWCDLNIKEKIGAGSFGTVHRAEW---HGSDVAVKILMEQDFHAERVNEFLREVAIMK 89
Query: 64 KSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLL-ENQPHGYLSESKARFYIYELAQA 122
+ + P IV + ++ + EY++ G LL ++ L E + Y++A+
Sbjct: 90 RLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKG 149
Query: 123 VQYLHGLG--YVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAP 180
+ YLH VHRD+K N+L+ +K+ DFG +++ + + S GTPE++AP
Sbjct: 150 MNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFG-LSRLKASXFLXSKXAAGTPEWMAP 208
Query: 181 EVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFN 219
EVL N SD Y S GV+ +EL T P+
Sbjct: 209 EVLRDEPSNEKSDVY-------SFGVILWELATLQQPWG 240
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 106/236 (44%), Gaps = 42/236 (17%)
Query: 10 KNVSASD-FDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLR--EKMPNT--IERDIMV- 63
KNV D + IK I +G++G +YL +K + +KKV R E + + I R+I +
Sbjct: 20 KNVHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITIL 79
Query: 64 -KSKCPYIVNLFY-----SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIY 117
+ K YI+ L+ + +Y ++E + D L + +L+E + +Y
Sbjct: 80 NRLKSDYIIRLYDLIIPDDLLKFDELYIVLE-IADSDLKKLFKTP--IFLTEEHIKTILY 136
Query: 118 ELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQV----------------- 160
L ++H G +HRD+KP N LL+ +K+ DFG A +
Sbjct: 137 NLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEE 196
Query: 161 ----DKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELL 212
+KN + + V T Y APE++ E YT S D+WS G + ELL
Sbjct: 197 PGPHNKNLKKQLTSHVVTRWYRAPELILLQE------NYTKSIDIWSTGCIFAELL 246
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 131/296 (44%), Gaps = 46/296 (15%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVLR----EKMPNTIERDIMVKSKCPY--IVNLFYS 76
I +G +G ++ + +++H +K+V E +P++ R+I + + + IV L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
+ + E+ D ++ +G L + ++++L + + + H +HRD+
Sbjct: 70 LHSDKKLTLVFEFCDQ-DLKKYFDSC-NGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDL 127
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYT 196
KP N+L++ G LKL DFG A R S V T Y P+VL G+ Y+
Sbjct: 128 KPQNLLINRNGELKLADFGLARAFGIPVRCYS-AEVVTLWYRPPDVL------FGAKLYS 180
Query: 197 GSCDLWSIGVVSYELLTGSTP-FNYETLDMTYSSI---LACDTEDTVSFPSSIRL----- 247
S D+WS G + EL + P F +D I L TE+ +PS +L
Sbjct: 181 TSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEE--QWPSMTKLPDYKP 238
Query: 248 ------STAMVNFV-------QSLVQKL-----DARLNMDQVLGHPVFDCLDSDPP 285
+T++VN V + L+Q L R++ ++ L HP F D PP
Sbjct: 239 YPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFS--DFCPP 292
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 94/205 (45%), Gaps = 25/205 (12%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVLR-----EKMPNTIERDIMVKSKC-----PYIVN 72
I +G +G ++ + ++ FV K +R E MP + R++ V P +V
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 73 LF----YSFQDM-NHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLH 127
LF S D + + E+V D T L+ P + + +++L + + +LH
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH 137
Query: 128 GLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWME 187
VHRD+KP N+L++++G +KL DFG A + S+V T Y APEVL
Sbjct: 138 SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV--TLWYRAPEVLL--- 192
Query: 188 GNHGSDGYTGSCDLWSIGVVSYELL 212
Y DLWS+G + E+
Sbjct: 193 ----QSSYATPVDLWSVGCIFAEMF 213
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 79/153 (51%), Gaps = 19/153 (12%)
Query: 70 IVNLFY---SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYL 126
++N+F S ++ VY +ME + + +++ + L + + +Y++ +++L
Sbjct: 90 LLNVFTPQKSLEEFQDVYIVME-LMDANLCQVIQME----LDHERMSYLLYQMLCGIKHL 144
Query: 127 HGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVP-VGTPEYVAPEVLEW 185
H G +HRD+KP N+++ + LK+ DFG A G +VP V T Y APEV+
Sbjct: 145 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMVPFVVTRYYRAPEVILG 201
Query: 186 MEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
M GY + D+WS+G + E++ G F
Sbjct: 202 M-------GYKENVDIWSVGCIMGEMIKGGVLF 227
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 105/221 (47%), Gaps = 38/221 (17%)
Query: 17 FDIKRFIQQGNFGD----IYLVEE-----------KQSHNTFVMKKVLREKMPNTIERDI 61
++ R I +G FGD IY+ E K + V +K L+E +
Sbjct: 14 IELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL-------T 66
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQ 121
M + P+IV L + N V+ IME T G+ + L+ + + L + Y Y+L+
Sbjct: 67 MRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLST 124
Query: 122 AVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSI---VPVGTPEYV 178
A+ YL +VHRDI N+L+S+ +KL DFG + ++ + K+ +P+ +++
Sbjct: 125 ALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI---KWM 181
Query: 179 APEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
APE + + +T + D+W GV +E+L G PF
Sbjct: 182 APESINFRR-------FTSASDVWMFGVCMWEILMHGVKPF 215
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 105/221 (47%), Gaps = 38/221 (17%)
Query: 17 FDIKRFIQQGNFGD----IYLVEE-----------KQSHNTFVMKKVLREKMPNTIERDI 61
++ R I +G FGD IY+ E K + V +K L+E +
Sbjct: 15 IELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL-------T 67
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQ 121
M + P+IV L + N V+ IME T G+ + L+ + + L + Y Y+L+
Sbjct: 68 MRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLST 125
Query: 122 AVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSI---VPVGTPEYV 178
A+ YL +VHRDI N+L+S+ +KL DFG + ++ + K+ +P+ +++
Sbjct: 126 ALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI---KWM 182
Query: 179 APEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
APE + + +T + D+W GV +E+L G PF
Sbjct: 183 APESINFRR-------FTSASDVWMFGVCMWEILMHGVKPF 216
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 105/221 (47%), Gaps = 38/221 (17%)
Query: 17 FDIKRFIQQGNFGD----IYLVEE-----------KQSHNTFVMKKVLREKMPNTIERDI 61
++ R I +G FGD IY+ E K + V +K L+E +
Sbjct: 9 IELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL-------T 61
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQ 121
M + P+IV L + N V+ IME T G+ + L+ + + L + Y Y+L+
Sbjct: 62 MRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLST 119
Query: 122 AVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSI---VPVGTPEYV 178
A+ YL +VHRDI N+L+S+ +KL DFG + ++ + K+ +P+ +++
Sbjct: 120 ALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI---KWM 176
Query: 179 APEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
APE + + +T + D+W GV +E+L G PF
Sbjct: 177 APESINFRR-------FTSASDVWMFGVCMWEILMHGVKPF 210
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 106/230 (46%), Gaps = 38/230 (16%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGD----IYLVEE-----------KQSHNTFVMKKVLREK 52
R + ++ R I +G FGD IY+ E K + V +K L+E
Sbjct: 383 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEA 442
Query: 53 MPNTIERDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKA 112
+ M + P+IV L + N V+ IME T G+ + L+ + L +
Sbjct: 443 L-------TMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFS-LDLASL 493
Query: 113 RFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSI--- 169
Y Y+L+ A+ YL +VHRDI N+L+S+ +KL DFG + ++ + K+
Sbjct: 494 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 553
Query: 170 VPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
+P+ +++APE + + +T + D+W GV +E+L G PF
Sbjct: 554 LPI---KWMAPESINFRR-------FTSASDVWMFGVCMWEILMHGVKPF 593
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 74/143 (51%), Gaps = 19/143 (13%)
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
FQD VY +ME + + +++ + L + + +Y++ +++LH G +HRD+
Sbjct: 101 FQD---VYIVME-LMDANLSQVIQME----LDHERMSYLLYQMLVGIKHLHSAGIIHRDL 152
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVP-VGTPEYVAPEVLEWMEGNHGSDGY 195
KP N+++ + LK+ DFG A G + P V T Y APEV+ M GY
Sbjct: 153 KPSNIVVKSDATLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILGM-------GY 202
Query: 196 TGSCDLWSIGVVSYELLTGSTPF 218
+ D+WS+GV+ E++ G F
Sbjct: 203 KENVDIWSVGVIMGEMIKGGVLF 225
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 74/143 (51%), Gaps = 19/143 (13%)
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
FQD VY +ME + + +++ + L + + +Y++ +++LH G +HRD+
Sbjct: 101 FQD---VYIVME-LMDANLSQVIQME----LDHERMSYLLYQMLVGIKHLHSAGIIHRDL 152
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVP-VGTPEYVAPEVLEWMEGNHGSDGY 195
KP N+++ + LK+ DFG A G + P V T Y APEV+ M GY
Sbjct: 153 KPSNIVVKSDATLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILGM-------GY 202
Query: 196 TGSCDLWSIGVVSYELLTGSTPF 218
+ D+WS+GV+ E++ G F
Sbjct: 203 KENVDIWSVGVIMGEMIKGGVLF 225
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 103/216 (47%), Gaps = 28/216 (12%)
Query: 17 FDIKRFIQQGNFGD----IYLVEEKQSHNTFV------MKKVLREKMPNTIERDIMVKSK 66
++ R I +G FGD IY+ E + + +REK E M +
Sbjct: 12 IELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ--EALTMRQFD 69
Query: 67 CPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYL 126
P+IV L + N V+ IME T G+ + L+ + + L + Y Y+L+ A+ YL
Sbjct: 70 HPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLSTALAYL 127
Query: 127 HGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSI---VPVGTPEYVAPEVL 183
+VHRDI N+L+S+ +KL DFG + ++ + K+ +P+ +++APE +
Sbjct: 128 ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI---KWMAPESI 184
Query: 184 EWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
+ +T + D+W GV +E+L G PF
Sbjct: 185 NFRR-------FTSASDVWMFGVCMWEILMHGVKPF 213
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 105/221 (47%), Gaps = 38/221 (17%)
Query: 17 FDIKRFIQQGNFGD----IYLVEE-----------KQSHNTFVMKKVLREKMPNTIERDI 61
++ R I +G FGD IY+ E K + V +K L+E +
Sbjct: 17 IELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL-------T 69
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQ 121
M + P+IV L + N V+ IME T G+ + L+ + + L + Y Y+L+
Sbjct: 70 MRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLST 127
Query: 122 AVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSI---VPVGTPEYV 178
A+ YL +VHRDI N+L+S+ +KL DFG + ++ + K+ +P+ +++
Sbjct: 128 ALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI---KWM 184
Query: 179 APEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
APE + + +T + D+W GV +E+L G PF
Sbjct: 185 APESINFRR-------FTSASDVWMFGVCMWEILMHGVKPF 218
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 28/216 (12%)
Query: 17 FDIKRFIQQGNFGD----IYLVEEKQSHNTFV------MKKVLREKMPNTIERDIMVKSK 66
++ R I +G FGD IY+ E + + +REK E M +
Sbjct: 12 IELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ--EALTMRQFD 69
Query: 67 CPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYL 126
P+IV L + N V+ IME T G+ + L+ + L + Y Y+L+ A+ YL
Sbjct: 70 HPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFS-LDLASLILYAYQLSTALAYL 127
Query: 127 HGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSI---VPVGTPEYVAPEVL 183
+VHRDI N+L+S+ +KL DFG + ++ + K+ +P+ +++APE +
Sbjct: 128 ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPI---KWMAPESI 184
Query: 184 EWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
+ +T + D+W GV +E+L G PF
Sbjct: 185 NFRR-------FTSASDVWMFGVCMWEILMHGVKPF 213
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 131/309 (42%), Gaps = 58/309 (18%)
Query: 13 SASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKV---LREKMPNTIERDI--MVKSKC 67
S+S F + G + +Y K + +K+V E P+T R+I M + K
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 68 PYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLE-----NQPHGYLSESKARFYIYELAQA 122
IV L+ N + + E++ D ++ N P G L + +++ ++L Q
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRG-LELNLVKYFQWQLLQG 120
Query: 123 VQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFG--SATQVDKNGRIKSIVPVGTPEYVAP 180
+ + H +HRD+KP N+L++ G LKL DFG A + N +V T Y AP
Sbjct: 121 LAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV---TLWYRAP 177
Query: 181 EVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF----NYETLDMTYSSILACDTE 236
+VL GS Y+ S D+WS G + E++TG F + E L + + I+ E
Sbjct: 178 DVLM------GSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIF-DIMGTPNE 230
Query: 237 DTVSFPSSIRLS---------------------------TAMVNFVQSLVQ-KLDARLNM 268
+PS +L +++F+ L+Q D RL+
Sbjct: 231 SL--WPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSA 288
Query: 269 DQVLGHPVF 277
Q L HP F
Sbjct: 289 KQALHHPWF 297
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 107/230 (46%), Gaps = 38/230 (16%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGD----IYLVEE-----------KQSHNTFVMKKVLREK 52
R + ++ R I +G FGD IY+ E K + V +K L+E
Sbjct: 3 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEA 62
Query: 53 MPNTIERDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKA 112
+ M + P+IV L + N V+ IME T G+ + L+ + + L +
Sbjct: 63 L-------TMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYS-LDLASL 113
Query: 113 RFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSI--- 169
Y Y+L+ A+ YL +VHRDI N+L+S+ +KL DFG + ++ + K+
Sbjct: 114 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 173
Query: 170 VPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
+P+ +++APE + + +T + D+W GV +E+L G PF
Sbjct: 174 LPI---KWMAPESINFRR-------FTSASDVWMFGVCMWEILMHGVKPF 213
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 105/221 (47%), Gaps = 38/221 (17%)
Query: 17 FDIKRFIQQGNFGD----IYLVEE-----------KQSHNTFVMKKVLREKMPNTIERDI 61
++ R I +G FGD IY+ E K + V +K L+E +
Sbjct: 40 IELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL-------T 92
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQ 121
M + P+IV L + N V+ IME T G+ + L+ + + L + Y Y+L+
Sbjct: 93 MRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLST 150
Query: 122 AVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSI---VPVGTPEYV 178
A+ YL +VHRDI N+L+S+ +KL DFG + ++ + K+ +P+ +++
Sbjct: 151 ALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI---KWM 207
Query: 179 APEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
APE + + +T + D+W GV +E+L G PF
Sbjct: 208 APESINFRR-------FTSASDVWMFGVCMWEILMHGVKPF 241
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 104/219 (47%), Gaps = 21/219 (9%)
Query: 11 NVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREK-----MPNTIERD--IMV 63
++ D +IK I G+FG ++ E H + V K+L E+ N R+ IM
Sbjct: 33 DIPWCDLNIKEKIGAGSFGTVHRAEW---HGSDVAVKILMEQDFHAERVNEFLREVAIMK 89
Query: 64 KSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLL-ENQPHGYLSESKARFYIYELAQA 122
+ + P IV + ++ + EY++ G LL ++ L E + Y++A+
Sbjct: 90 RLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKG 149
Query: 123 VQYLHGLG--YVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAP 180
+ YLH VHR++K N+L+ +K+ DFG +++ + + S GTPE++AP
Sbjct: 150 MNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFG-LSRLKASTFLSSKSAAGTPEWMAP 208
Query: 181 EVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFN 219
EVL N SD Y S GV+ +EL T P+
Sbjct: 209 EVLRDEPSNEKSDVY-------SFGVILWELATLQQPWG 240
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 118/258 (45%), Gaps = 42/258 (16%)
Query: 14 ASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLR-EKMPNTIERDIMVKSKC--PYI 70
ASDF+ + QG FG + + +KK+ E+ +TI ++M+ + Y+
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYV 64
Query: 71 VNLFYSFQDMNH-------------VYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIY 117
V + ++ + + ++ MEY G L+ ++ + R +
Sbjct: 65 VRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLF-R 123
Query: 118 ELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSI----VP-- 171
++ +A+ Y+H G +HRD+KP N+ + + ++K+ DFG A V ++ I + +P
Sbjct: 124 QILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 172 -------VGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLD 224
+GT YVA EVL+ G+ Y D++S+G++ +E++ PF +
Sbjct: 184 SDNLTSAIGTAMYVATEVLD------GTGHYNEKIDMYSLGIIFFEMI---YPF---STG 231
Query: 225 MTYSSILACDTEDTVSFP 242
M +IL ++ FP
Sbjct: 232 MERVNILKKLRSVSIEFP 249
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 102/233 (43%), Gaps = 46/233 (19%)
Query: 17 FDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLR--EKMPNT--IERDIMVKSKC--PYI 70
++I+ I G++G + +K +KK+LR E + + I R+I + ++ ++
Sbjct: 55 YEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHV 114
Query: 71 VNLF-----YSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQY 125
V + + + +Y ++E + DF L YL+E + +Y L V+Y
Sbjct: 115 VKVLDIVIPKDVEKFDELYVVLE-IADSDFKKLFRTP--VYLTELHIKTLLYNLLVGVKY 171
Query: 126 LHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPE--------- 176
+H G +HRD+KP N L++ +K+ DFG A VD S +P+ E
Sbjct: 172 VHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFP 231
Query: 177 -----------------YVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELL 212
Y APE++ E YT + D+WSIG + ELL
Sbjct: 232 HTKNLKRQLTGHVVTRWYRAPELILLQE------NYTEAIDVWSIGCIFAELL 278
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 130/296 (43%), Gaps = 46/296 (15%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVLR----EKMPNTIERDIMVKSKCPY--IVNLFYS 76
I +G +G ++ + +++H +K+V E +P++ R+I + + + IV L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
+ + E+ D ++ +G L + ++++L + + + H +HRD+
Sbjct: 70 LHSDKKLTLVFEFCDQ-DLKKYFDSC-NGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDL 127
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYT 196
KP N+L++ G LKL +FG A R S V T Y P+VL G+ Y+
Sbjct: 128 KPQNLLINRNGELKLANFGLARAFGIPVRCYS-AEVVTLWYRPPDVL------FGAKLYS 180
Query: 197 GSCDLWSIGVVSYELLTGSTP-FNYETLDMTYSSI---LACDTEDTVSFPSSIRL----- 247
S D+WS G + EL P F +D I L TE+ +PS +L
Sbjct: 181 TSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEE--QWPSMTKLPDYKP 238
Query: 248 ------STAMVNFV-------QSLVQKL-----DARLNMDQVLGHPVFDCLDSDPP 285
+T++VN V + L+Q L R++ ++ L HP F D PP
Sbjct: 239 YPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFS--DFCPP 292
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 106/223 (47%), Gaps = 30/223 (13%)
Query: 12 VSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPN-----TIERDIMVKSK 66
+ AS+ + I G+FG +Y K + V K+L+ P ++ V K
Sbjct: 33 IEASEVMLSTRIGSGSFGTVY----KGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRK 88
Query: 67 CPYI-VNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYEL------ 119
++ + LF + +++ + ++ G + +L + +F +++L
Sbjct: 89 TRHVNILLFMGYMTKDNLAIVTQWCEGSSL--------YKHLHVQETKFQMFQLIDIARQ 140
Query: 120 -AQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDK-NGRIKSIVPVGTPEY 177
AQ + YLH +HRD+K +N+ L +K+ DFG AT + +G + P G+ +
Sbjct: 141 TAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLW 200
Query: 178 VAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNY 220
+APEV+ + N ++ D++S G+V YEL+TG P+++
Sbjct: 201 MAPEVIRMQDNN----PFSFQSDVYSYGIVLYELMTGELPYSH 239
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 78/153 (50%), Gaps = 19/153 (12%)
Query: 70 IVNLFY---SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYL 126
++N+F S ++ VY +ME + + +++ + L + + +Y++ +++L
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVME-LMDANLCQVIQME----LDHERMSYLLYQMLCGIKHL 142
Query: 127 HGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVP-VGTPEYVAPEVLEW 185
H G +HRD+KP N+++ + LK+ DFG A G + P V T Y APEV+
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPEVVTRYYRAPEVILG 199
Query: 186 MEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
M GY + D+WS+G + E++ G F
Sbjct: 200 M-------GYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 78/153 (50%), Gaps = 19/153 (12%)
Query: 70 IVNLFY---SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYL 126
++N+F S ++ VY +ME + + +++ + L + + +Y++ +++L
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVME-LMDANLCQVIQME----LDHERMSYLLYQMLCGIKHL 142
Query: 127 HGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVP-VGTPEYVAPEVLEW 185
H G +HRD+KP N+++ + LK+ DFG A G + P V T Y APEV+
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILG 199
Query: 186 MEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
M GY + D+WS+G + E++ G F
Sbjct: 200 M-------GYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 73/143 (51%), Gaps = 19/143 (13%)
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
FQD VY +ME + + +++ + L + + +Y++ +++LH G +HRD+
Sbjct: 101 FQD---VYIVME-LMDANLSQVIQME----LDHERMSYLLYQMLVGIKHLHSAGIIHRDL 152
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVP-VGTPEYVAPEVLEWMEGNHGSDGY 195
KP N+++ + LK+ DFG A G + P V T Y APEV+ M GY
Sbjct: 153 KPSNIVVKSDATLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILGM-------GY 202
Query: 196 TGSCDLWSIGVVSYELLTGSTPF 218
+ D+WS+G + E++ G F
Sbjct: 203 KENVDIWSVGCIMGEMIKGGVLF 225
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 73/143 (51%), Gaps = 19/143 (13%)
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
FQD VY +ME + + +++ + L + + +Y++ +++LH G +HRD+
Sbjct: 101 FQD---VYIVME-LMDANLCQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDL 152
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVP-VGTPEYVAPEVLEWMEGNHGSDGY 195
KP N+++ + LK+ DFG A G + P V T Y APEV+ M GY
Sbjct: 153 KPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILGM-------GY 202
Query: 196 TGSCDLWSIGVVSYELLTGSTPF 218
+ D+WS+G + E++ G F
Sbjct: 203 KENVDIWSVGCIMGEMIKGGVLF 225
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 78/153 (50%), Gaps = 19/153 (12%)
Query: 70 IVNLFY---SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYL 126
++N+F S ++ VY +ME + + +++ + L + + +Y++ +++L
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVME-LMDANLSQVIQME----LDHERMSYLLYQMLCGIKHL 142
Query: 127 HGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVP-VGTPEYVAPEVLEW 185
H G +HRD+KP N+++ + LK+ DFG A G + P V T Y APEV+
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDATLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILG 199
Query: 186 MEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
M GY + D+WS+G + E++ G F
Sbjct: 200 M-------GYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 78/153 (50%), Gaps = 19/153 (12%)
Query: 70 IVNLFY---SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYL 126
++N+F S ++ VY +ME + + +++ + L + + +Y++ +++L
Sbjct: 89 LLNVFTPQKSLEEFQDVYIVME-LMDANLCQVIQME----LDHERMSYLLYQMLCGIKHL 143
Query: 127 HGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVP-VGTPEYVAPEVLEW 185
H G +HRD+KP N+++ + LK+ DFG A G + P V T Y APEV+
Sbjct: 144 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILG 200
Query: 186 MEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
M GY + D+WS+G + E++ G F
Sbjct: 201 M-------GYKENVDIWSVGCIMGEMIKGGVLF 226
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 73/143 (51%), Gaps = 19/143 (13%)
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
FQD VY +ME + + +++ + L + + +Y++ +++LH G +HRD+
Sbjct: 101 FQD---VYIVME-LMDANLSQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDL 152
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVP-VGTPEYVAPEVLEWMEGNHGSDGY 195
KP N+++ + LK+ DFG A G + P V T Y APEV+ M GY
Sbjct: 153 KPSNIVVKSDATLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILGM-------GY 202
Query: 196 TGSCDLWSIGVVSYELLTGSTPF 218
+ D+WS+G + E++ G F
Sbjct: 203 KENVDIWSVGCIMGEMIKGGVLF 225
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 78/153 (50%), Gaps = 19/153 (12%)
Query: 70 IVNLFY---SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYL 126
++N+F S ++ VY +ME + + +++ + L + + +Y++ +++L
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVME-LMDANLSQVIQME----LDHERMSYLLYQMLCGIKHL 142
Query: 127 HGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVP-VGTPEYVAPEVLEW 185
H G +HRD+KP N+++ + LK+ DFG A G + P V T Y APEV+
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILG 199
Query: 186 MEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
M GY + D+WS+G + E++ G F
Sbjct: 200 M-------GYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 100/216 (46%), Gaps = 15/216 (6%)
Query: 67 CPYIVNLFYSFQDMNHVYFIMEYV-TGGD-FVTLLENQPHGYLSESKARFYIYELAQAVQ 124
CP+ V + + V+ ME + T D F + ++ + + + + +A++
Sbjct: 109 CPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAV-SIVKALE 167
Query: 125 YLHG-LGYVHRDIKPDNMLLSATGHLKLTDFG-SATQVDKNGRIKSIVPVGTPEYVAPEV 182
+LH L +HRD+KP N+L++A G +K+ DFG S VD + + G Y+APE
Sbjct: 168 HLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDS---VAKTIDAGCKPYMAPER 224
Query: 183 LEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFP 242
+ E N GY+ D+WS+G+ EL F Y++ + + E + P
Sbjct: 225 IN-PELNQ--KGYSVKSDIWSLGITMIELAI--LRFPYDSWGTPFQQLKQVVEEPSPQLP 279
Query: 243 SSIRLSTAMVNFV-QSLVQKLDARLNMDQVLGHPVF 277
+ + S V+F Q L + R +++ HP F
Sbjct: 280 AD-KFSAEFVDFTSQCLKKNSKERPTYPELMQHPFF 314
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 127/291 (43%), Gaps = 51/291 (17%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVL---REKMPNTIERDI-MVKS-KCPYIVNLFYSF 77
+ +G + +Y + K + N +K++ E P T R++ ++K K IV L
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII 69
Query: 78 QDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIK 137
+ + EY+ D L++ + ++ + ++++L + + Y H +HRD+K
Sbjct: 70 HTEKSLTLVFEYLDK-DLKQYLDDCGN-IINMHNVKLFLFQLLRGLAYCHRQKVLHRDLK 127
Query: 138 PDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVP------VGTPEYVAPEVLEWMEGNHG 191
P N+L++ G LKL DFG A R KSI V T Y P++L G
Sbjct: 128 PQNLLINERGELKLADFGLA-------RAKSIPTKTYDNEVVTLWYRPPDILL------G 174
Query: 192 SDGYTGSCDLWSIGVVSYELLTGSTPFNYETL---------------DMTYSSILACDTE 236
S Y+ D+W +G + YE+ TG F T+ + T+ IL+ +
Sbjct: 175 STDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEF 234
Query: 237 DTVSFP---------SSIRLSTAMVNFVQSLVQ-KLDARLNMDQVLGHPVF 277
T ++P + RL + + + L+Q + R++ + + HP F
Sbjct: 235 KTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFF 285
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 104/211 (49%), Gaps = 27/211 (12%)
Query: 19 IKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTI-------ERDIMVKSKCPYIV 71
+KR + G FG++++ +++T V K L+ P T+ E ++M + +V
Sbjct: 18 VKR-LGAGQFGEVWM--GYYNNSTKVAVKTLK---PGTMSVQAFLEEANLMKTLQHDKLV 71
Query: 72 NLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGY 131
L+ +Y I EY+ G + L++ G + K + ++A+ + Y+ Y
Sbjct: 72 RLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNY 131
Query: 132 VHRDIKPDNMLLSATGHLKLTDFGSATQVDKN---GRIKSIVPVGTPEYVAPEVLEWMEG 188
+HRD++ N+L+S + K+ DFG A ++ N R + P+ ++ APE +
Sbjct: 132 IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPI---KWTAPEAI----- 183
Query: 189 NHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
N G +T D+WS G++ YE++T G P+
Sbjct: 184 NFGC--FTIKSDVWSFGILLYEIVTYGKIPY 212
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 106/234 (45%), Gaps = 37/234 (15%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREK------MPNT--IER 59
++K S + + + G FG +Y + +K V +++ +PN +
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 60
Query: 60 DIM----VKSKCPYIVNLFYSFQDMNHVYFIMEYVTG----GDFVTLLENQPHGYLSESK 111
+++ V S ++ L F+ + I+E + DF+T G L E
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFIT-----ERGALQEEL 115
Query: 112 ARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSAT-GHLKLTDFGSATQVDKNGRIKSIV 170
AR + +++ +AV++ H G +HRDIK +N+L+ G LKL DFGS +K V
Sbjct: 116 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL------LKDTV 169
Query: 171 PV---GTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYE 221
GT Y PE + + HG S +WS+G++ Y+++ G PF ++
Sbjct: 170 YTDFDGTRVYSPPEWIRYHR-YHGR-----SAAVWSLGILLYDMVCGDIPFEHD 217
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 106/235 (45%), Gaps = 37/235 (15%)
Query: 7 LRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREK------MPNT--IE 58
+++K S + + + G FG +Y + +K V +++ +PN +
Sbjct: 1 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 59 RDIM----VKSKCPYIVNLFYSFQDMNHVYFIMEYVTG----GDFVTLLENQPHGYLSES 110
+++ V S ++ L F+ + I+E DF+T G L E
Sbjct: 61 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT-----ERGALQEE 115
Query: 111 KARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSAT-GHLKLTDFGSATQVDKNGRIKSI 169
AR + +++ +AV++ H G +HRDIK +N+L+ G LKL DFGS +K
Sbjct: 116 LARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL------LKDT 169
Query: 170 VPV---GTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYE 221
V GT Y PE + + HG S +WS+G++ Y+++ G PF ++
Sbjct: 170 VYTDFDGTRVYSPPEWIRYHR-YHGR-----SAAVWSLGILLYDMVCGDIPFEHD 218
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 106/235 (45%), Gaps = 37/235 (15%)
Query: 7 LRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREK------MPNT--IE 58
+++K S + + + G FG +Y + +K V +++ +PN +
Sbjct: 1 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 59 RDIM----VKSKCPYIVNLFYSFQDMNHVYFIMEYVTG----GDFVTLLENQPHGYLSES 110
+++ V S ++ L F+ + I+E DF+T G L E
Sbjct: 61 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT-----ERGALQEE 115
Query: 111 KARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSAT-GHLKLTDFGSATQVDKNGRIKSI 169
AR + +++ +AV++ H G +HRDIK +N+L+ G LKL DFGS +K
Sbjct: 116 LARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL------LKDT 169
Query: 170 VPV---GTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYE 221
V GT Y PE + + HG S +WS+G++ Y+++ G PF ++
Sbjct: 170 VYTDFDGTRVYSPPEWIRYHR-YHGR-----SAAVWSLGILLYDMVCGDIPFEHD 218
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 117/258 (45%), Gaps = 42/258 (16%)
Query: 14 ASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLR-EKMPNTIERDIMVKSKC--PYI 70
ASDF+ + QG FG + + +KK+ E+ +TI ++M+ + Y+
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYV 64
Query: 71 VNLFYSFQDMNH-------------VYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIY 117
V + ++ + + ++ MEY L+ ++ + R +
Sbjct: 65 VRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLF-R 123
Query: 118 ELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSI----VP-- 171
++ +A+ Y+H G +HRD+KP N+ + + ++K+ DFG A V ++ I + +P
Sbjct: 124 QILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 172 -------VGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLD 224
+GT YVA EVL+ G+ Y D++S+G++ +E++ PF +
Sbjct: 184 SDNLTSAIGTAMYVATEVLD------GTGHYNEKIDMYSLGIIFFEMI---YPF---STG 231
Query: 225 MTYSSILACDTEDTVSFP 242
M +IL ++ FP
Sbjct: 232 MERVNILKKLRSVSIEFP 249
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 68/132 (51%), Gaps = 21/132 (15%)
Query: 94 DFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSAT-GHLKLT 152
DF+T G L E AR + +++ +AV++ H G +HRDIK +N+L+ G LKL
Sbjct: 146 DFIT-----ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLI 200
Query: 153 DFGSATQVDKNGRIKSIVPV---GTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSY 209
DFGS +K V GT Y PE + + HG S +WS+G++ Y
Sbjct: 201 DFGSGAL------LKDTVYTDFDGTRVYSPPEWIRYHR-YHGR-----SAAVWSLGILLY 248
Query: 210 ELLTGSTPFNYE 221
+++ G PF ++
Sbjct: 249 DMVCGDIPFEHD 260
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 77/152 (50%), Gaps = 17/152 (11%)
Query: 70 IVNLFY---SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYL 126
++N+F S ++ VY +ME + + +++ + L + + +Y++ +++L
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVME-LMDANLCQVIQME----LDHERMSYLLYQMLCGIKHL 142
Query: 127 HGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWM 186
H G +HRD+KP N+++ + LK+ DFG A + ++ V T Y APEV+ M
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEP--EVVTRYYRAPEVILGM 200
Query: 187 EGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
GY + DLWS+G + E++ F
Sbjct: 201 -------GYKENVDLWSVGCIMGEMVCHKILF 225
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 105/234 (44%), Gaps = 37/234 (15%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREK------MPNT--IER 59
++K S + + + G FG +Y + +K V +++ +PN +
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 60 DIM----VKSKCPYIVNLFYSFQDMNHVYFIMEYVTG----GDFVTLLENQPHGYLSESK 111
+++ V S ++ L F+ + I+E DF+T G L E
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT-----ERGALQEEL 143
Query: 112 ARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSAT-GHLKLTDFGSATQVDKNGRIKSIV 170
AR + +++ +AV++ H G +HRDIK +N+L+ G LKL DFGS +K V
Sbjct: 144 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL------LKDTV 197
Query: 171 PV---GTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYE 221
GT Y PE + + HG S +WS+G++ Y+++ G PF ++
Sbjct: 198 YTDFDGTRVYSPPEWIRYHR-YHGR-----SAAVWSLGILLYDMVCGDIPFEHD 245
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 112/230 (48%), Gaps = 42/230 (18%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPN------TIERDI--MVKSK 66
+DF+ + + +G FG ++ + K + +K++ ++PN + R++ + K +
Sbjct: 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRI---RLPNRELAREKVMREVKALAKLE 61
Query: 67 CPYIVNLFYSFQDMN------------HVYFIMEYVTGGDFVTLLENQPHGYLSESKARF 114
P IV F ++ + N ++Y M+ + + + E
Sbjct: 62 HPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCL 121
Query: 115 YIY-ELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVP-- 171
+I+ ++A+AV++LH G +HRD+KP N+ + +K+ DFG T +D++ ++++
Sbjct: 122 HIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPM 181
Query: 172 ---------VGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELL 212
VGT Y++PE + HG + Y+ D++S+G++ +ELL
Sbjct: 182 PAYARHTGQVGTKLYMSPEQI------HG-NSYSHKVDIFSLGLILFELL 224
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 105/234 (44%), Gaps = 37/234 (15%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREK------MPNT--IER 59
++K S + + + G FG +Y + +K V +++ +PN +
Sbjct: 44 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 103
Query: 60 DIM----VKSKCPYIVNLFYSFQDMNHVYFIMEYVTG----GDFVTLLENQPHGYLSESK 111
+++ V S ++ L F+ + I+E DF+T G L E
Sbjct: 104 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT-----ERGALQEEL 158
Query: 112 ARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSAT-GHLKLTDFGSATQVDKNGRIKSIV 170
AR + +++ +AV++ H G +HRDIK +N+L+ G LKL DFGS +K V
Sbjct: 159 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL------LKDTV 212
Query: 171 PV---GTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYE 221
GT Y PE + + HG S +WS+G++ Y+++ G PF ++
Sbjct: 213 YTDFDGTRVYSPPEWIRYHR-YHGR-----SAAVWSLGILLYDMVCGDIPFEHD 260
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 106/235 (45%), Gaps = 37/235 (15%)
Query: 7 LRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREK------MPNT--IE 58
+++K S + + + G FG +Y + +K V +++ +PN +
Sbjct: 1 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 59 RDIM----VKSKCPYIVNLFYSFQDMNHVYFIMEYVTG----GDFVTLLENQPHGYLSES 110
+++ V S ++ L F+ + I+E DF+T G L E
Sbjct: 61 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT-----ERGALQEE 115
Query: 111 KARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSAT-GHLKLTDFGSATQVDKNGRIKSI 169
AR + +++ +AV++ H G +HRDIK +N+L+ G LKL DFGS +K
Sbjct: 116 LARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL------LKDT 169
Query: 170 VPV---GTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYE 221
V GT Y PE + + HG S +WS+G++ Y+++ G PF ++
Sbjct: 170 VYTDFDGTRVYSPPEWIRYHR-YHGR-----SAAVWSLGILLYDMVCGDIPFEHD 218
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 19/200 (9%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIE----RDI-MVKS-KCPYIVNLFYS 76
I +G++G ++ + + +KK L + I+ R+I M+K K P +VNL
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 77 FQDMNHVYFIMEYVTGGDFVTL--LENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHR 134
F+ ++ + EY D L L+ G + E + ++ QAV + H +HR
Sbjct: 71 FRRKRRLHLVFEYC---DHTVLHELDRYQRG-VPEHLVKSITWQTLQAVNFCHKHNCIHR 126
Query: 135 DIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDG 194
D+KP+N+L++ +KL DFG A + V T Y +PE+L G
Sbjct: 127 DVKPENILITKHSVIKLCDFGFARLLTGPSDYYD-DEVATRWYRSPELLV------GDTQ 179
Query: 195 YTGSCDLWSIGVVSYELLTG 214
Y D+W+IG V ELL+G
Sbjct: 180 YGPPVDVWAIGCVFAELLSG 199
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 102/227 (44%), Gaps = 37/227 (16%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREK------MPNT--IERDIM---- 62
S + + + G FG +Y + +K V +++ +PN + +++
Sbjct: 51 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 110
Query: 63 VKSKCPYIVNLFYSFQDMNHVYFIMEYVTG----GDFVTLLENQPHGYLSESKARFYIYE 118
V S ++ L F+ + I+E DF+T G L E AR + ++
Sbjct: 111 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT-----ERGALQEELARSFFWQ 165
Query: 119 LAQAVQYLHGLGYVHRDIKPDNMLLSAT-GHLKLTDFGSATQVDKNGRIKSIVPV---GT 174
+ +AV++ H G +HRDIK +N+L+ G LKL DFGS +K V GT
Sbjct: 166 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL------LKDTVYTDFDGT 219
Query: 175 PEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYE 221
Y PE + + HG S +WS+G++ Y+++ G PF ++
Sbjct: 220 RVYSPPEWIRYHR-YHGR-----SAAVWSLGILLYDMVCGDIPFEHD 260
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 102/227 (44%), Gaps = 37/227 (16%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREK------MPNT--IERDIM---- 62
S + + + G FG +Y + +K V +++ +PN + +++
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 96
Query: 63 VKSKCPYIVNLFYSFQDMNHVYFIMEYVTG----GDFVTLLENQPHGYLSESKARFYIYE 118
V S ++ L F+ + I+E DF+T G L E AR + ++
Sbjct: 97 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT-----ERGALQEELARSFFWQ 151
Query: 119 LAQAVQYLHGLGYVHRDIKPDNMLLSAT-GHLKLTDFGSATQVDKNGRIKSIVPV---GT 174
+ +AV++ H G +HRDIK +N+L+ G LKL DFGS +K V GT
Sbjct: 152 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL------LKDTVYTDFDGT 205
Query: 175 PEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYE 221
Y PE + + HG S +WS+G++ Y+++ G PF ++
Sbjct: 206 RVYSPPEWIRYHR-YHGR-----SAAVWSLGILLYDMVCGDIPFEHD 246
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 102/227 (44%), Gaps = 37/227 (16%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREK------MPNT--IERDIM---- 62
S + + + G FG +Y + +K V +++ +PN + +++
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 95
Query: 63 VKSKCPYIVNLFYSFQDMNHVYFIMEYVTG----GDFVTLLENQPHGYLSESKARFYIYE 118
V S ++ L F+ + I+E DF+T G L E AR + ++
Sbjct: 96 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT-----ERGALQEELARSFFWQ 150
Query: 119 LAQAVQYLHGLGYVHRDIKPDNMLLSAT-GHLKLTDFGSATQVDKNGRIKSIVPV---GT 174
+ +AV++ H G +HRDIK +N+L+ G LKL DFGS +K V GT
Sbjct: 151 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL------LKDTVYTDFDGT 204
Query: 175 PEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYE 221
Y PE + + HG S +WS+G++ Y+++ G PF ++
Sbjct: 205 RVYSPPEWIRYHR-YHGR-----SAAVWSLGILLYDMVCGDIPFEHD 245
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 105/234 (44%), Gaps = 37/234 (15%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREK------MPNT--IER 59
++K S + + + G FG +Y + +K V +++ +PN +
Sbjct: 16 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 75
Query: 60 DIM----VKSKCPYIVNLFYSFQDMNHVYFIMEYVTG----GDFVTLLENQPHGYLSESK 111
+++ V S ++ L F+ + I+E DF+T G L E
Sbjct: 76 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT-----ERGALQEEL 130
Query: 112 ARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSAT-GHLKLTDFGSATQVDKNGRIKSIV 170
AR + +++ +AV++ H G +HRDIK +N+L+ G LKL DFGS +K V
Sbjct: 131 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL------LKDTV 184
Query: 171 PV---GTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYE 221
GT Y PE + + HG S +WS+G++ Y+++ G PF ++
Sbjct: 185 YTDFDGTRVYSPPEWIRYHR-YHGR-----SAAVWSLGILLYDMVCGDIPFEHD 232
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 105/234 (44%), Gaps = 37/234 (15%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREK------MPNT--IER 59
++K S + + + G FG +Y + +K V +++ +PN +
Sbjct: 16 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 75
Query: 60 DIM----VKSKCPYIVNLFYSFQDMNHVYFIMEYVTG----GDFVTLLENQPHGYLSESK 111
+++ V S ++ L F+ + I+E DF+T G L E
Sbjct: 76 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT-----ERGALQEEL 130
Query: 112 ARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSAT-GHLKLTDFGSATQVDKNGRIKSIV 170
AR + +++ +AV++ H G +HRDIK +N+L+ G LKL DFGS +K V
Sbjct: 131 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL------LKDTV 184
Query: 171 PV---GTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYE 221
GT Y PE + + HG S +WS+G++ Y+++ G PF ++
Sbjct: 185 YTDFDGTRVYSPPEWIRYHR-YHGR-----SAAVWSLGILLYDMVCGDIPFEHD 232
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 102/227 (44%), Gaps = 37/227 (16%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREK------MPNT--IERDIM---- 62
S + + + G FG +Y + +K V +++ +PN + +++
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 96
Query: 63 VKSKCPYIVNLFYSFQDMNHVYFIMEYVTG----GDFVTLLENQPHGYLSESKARFYIYE 118
V S ++ L F+ + I+E DF+T G L E AR + ++
Sbjct: 97 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT-----ERGALQEELARSFFWQ 151
Query: 119 LAQAVQYLHGLGYVHRDIKPDNMLLSAT-GHLKLTDFGSATQVDKNGRIKSIVPV---GT 174
+ +AV++ H G +HRDIK +N+L+ G LKL DFGS +K V GT
Sbjct: 152 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL------LKDTVYTDFDGT 205
Query: 175 PEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYE 221
Y PE + + HG S +WS+G++ Y+++ G PF ++
Sbjct: 206 RVYSPPEWIRYHR-YHGR-----SAAVWSLGILLYDMVCGDIPFEHD 246
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 76/152 (50%), Gaps = 17/152 (11%)
Query: 70 IVNLFY---SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYL 126
++N+F S ++ VY +ME + + +++ + L + + +Y++ +++L
Sbjct: 93 LLNVFTPQKSLEEFQDVYIVME-LMDANLCQVIQME----LDHERMSYLLYQMLCGIKHL 147
Query: 127 HGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWM 186
H G +HRD+KP N+++ + LK+ DFG A + + V T Y APEV+ M
Sbjct: 148 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY--VVTRYYRAPEVILGM 205
Query: 187 EGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
GY + DLWS+G + E++ F
Sbjct: 206 -------GYKENVDLWSVGCIMGEMVCHKILF 230
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 102/227 (44%), Gaps = 37/227 (16%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREK------MPNT--IERDIM---- 62
S + + + G FG +Y + +K V +++ +PN + +++
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 96
Query: 63 VKSKCPYIVNLFYSFQDMNHVYFIMEYVTG----GDFVTLLENQPHGYLSESKARFYIYE 118
V S ++ L F+ + I+E DF+T G L E AR + ++
Sbjct: 97 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT-----ERGALQEELARSFFWQ 151
Query: 119 LAQAVQYLHGLGYVHRDIKPDNMLLSAT-GHLKLTDFGSATQVDKNGRIKSIVPV---GT 174
+ +AV++ H G +HRDIK +N+L+ G LKL DFGS +K V GT
Sbjct: 152 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL------LKDTVYTDFDGT 205
Query: 175 PEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYE 221
Y PE + + HG S +WS+G++ Y+++ G PF ++
Sbjct: 206 RVYSPPEWIRYHR-YHGR-----SAAVWSLGILLYDMVCGDIPFEHD 246
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 137/342 (40%), Gaps = 84/342 (24%)
Query: 1 KDVVKELRQKNVSASDFDIKRFIQQGNFGDIYL--------VEEKQSHNT---------- 42
+D++ EL S + ++RFI G++G + V K+ NT
Sbjct: 11 RDLIAELHAMQ---SPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNIL 67
Query: 43 ---FVMKKVLRE-------KMPNTIE-RDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVT 91
F+ K+VLRE PN + RDI V + P M+ +Y + E +
Sbjct: 68 SDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEP----------AMHKLYLVTE-LM 116
Query: 92 GGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKL 151
D ++ +Q +S ++++Y + + LH G VHRD+ P N+LL+ + +
Sbjct: 117 RTDLAQVIHDQ-RIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITI 175
Query: 152 TDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYE- 210
DF A + + V Y APE++ + G+T D+WS G V E
Sbjct: 176 CDFNLAREDTADANKTHY--VTHRWYRAPELVMQFK------GFTKLVDMWSAGCVMAEM 227
Query: 211 -----LLTGSTPFNYETLDMTYSSILACDTEDTVSF--PSS------------IRLSTAM 251
L GST +N L+ + ED V F PS+ R TA+
Sbjct: 228 FNRKALFRGSTFYN--QLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAV 285
Query: 252 VNFVQSLVQKLDA---------RLNMDQVLGHPVFDCLDSDP 284
V + L A R++ +Q L HP F+ L DP
Sbjct: 286 VPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESL-FDP 326
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 99/200 (49%), Gaps = 19/200 (9%)
Query: 26 GNFGDIYLVEEKQSHNTFVMKKVLREKM-PNTI--ERDIMVKSKCPYIVNLFYSFQDMNH 82
G FG++++ H +K + + M P+ E ++M + + +V L Y+
Sbjct: 30 GQFGEVWM-GYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL-YAVVTQEP 87
Query: 83 VYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNML 142
+Y I EY+ G V L+ L+ +K ++A+ + ++ Y+HRD++ N+L
Sbjct: 88 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 147
Query: 143 LSATGHLKLTDFGSATQVDKN---GRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSC 199
+S T K+ DFG A ++ N R + P+ ++ APE + N+G+ +T
Sbjct: 148 VSDTLSCKIADFGLARLIEDNEXTAREGAKFPI---KWTAPEAI-----NYGT--FTIKS 197
Query: 200 DLWSIGVVSYELLT-GSTPF 218
D+WS G++ E++T G P+
Sbjct: 198 DVWSFGILLTEIVTHGRIPY 217
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 105/234 (44%), Gaps = 37/234 (15%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREK------MPNT--IER 59
++K S + + + G FG +Y + +K V +++ +PN +
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 60 DIM----VKSKCPYIVNLFYSFQDMNHVYFIMEYVTG----GDFVTLLENQPHGYLSESK 111
+++ V S ++ L F+ + I+E DF+T G L E
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT-----ERGALQEEL 144
Query: 112 ARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSAT-GHLKLTDFGSATQVDKNGRIKSIV 170
AR + +++ +AV++ H G +HRDIK +N+L+ G LKL DFGS +K V
Sbjct: 145 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL------LKDTV 198
Query: 171 PV---GTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYE 221
GT Y PE + + HG S +WS+G++ Y+++ G PF ++
Sbjct: 199 YTDFDGTRVYSPPEWIRYHR-YHGR-----SAAVWSLGILLYDMVCGDIPFEHD 246
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 105/234 (44%), Gaps = 37/234 (15%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREK------MPNT--IER 59
++K S + + + G FG +Y + +K V +++ +PN +
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 60 DIM----VKSKCPYIVNLFYSFQDMNHVYFIMEYVTG----GDFVTLLENQPHGYLSESK 111
+++ V S ++ L F+ + I+E DF+T G L E
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT-----ERGALQEEL 143
Query: 112 ARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSAT-GHLKLTDFGSATQVDKNGRIKSIV 170
AR + +++ +AV++ H G +HRDIK +N+L+ G LKL DFGS +K V
Sbjct: 144 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL------LKDTV 197
Query: 171 PV---GTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYE 221
GT Y PE + + HG S +WS+G++ Y+++ G PF ++
Sbjct: 198 YTDFDGTRVYSPPEWIRYHR-YHGR-----SAAVWSLGILLYDMVCGDIPFEHD 245
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 105/234 (44%), Gaps = 37/234 (15%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREK------MPNT--IER 59
++K S + + + G FG +Y + +K V +++ +PN +
Sbjct: 17 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 76
Query: 60 DIM----VKSKCPYIVNLFYSFQDMNHVYFIMEYVTG----GDFVTLLENQPHGYLSESK 111
+++ V S ++ L F+ + I+E DF+T G L E
Sbjct: 77 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT-----ERGALQEEL 131
Query: 112 ARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSAT-GHLKLTDFGSATQVDKNGRIKSIV 170
AR + +++ +AV++ H G +HRDIK +N+L+ G LKL DFGS +K V
Sbjct: 132 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL------LKDTV 185
Query: 171 PV---GTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYE 221
GT Y PE + + HG S +WS+G++ Y+++ G PF ++
Sbjct: 186 YTDFDGTRVYSPPEWIRYHR-YHGR-----SAAVWSLGILLYDMVCGDIPFEHD 233
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 105/234 (44%), Gaps = 37/234 (15%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREK------MPNT--IER 59
++K S + + + G FG +Y + +K V +++ +PN +
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 60 DIM----VKSKCPYIVNLFYSFQDMNHVYFIMEYVTG----GDFVTLLENQPHGYLSESK 111
+++ V S ++ L F+ + I+E DF+T G L E
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT-----ERGALQEEL 143
Query: 112 ARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSAT-GHLKLTDFGSATQVDKNGRIKSIV 170
AR + +++ +AV++ H G +HRDIK +N+L+ G LKL DFGS +K V
Sbjct: 144 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL------LKDTV 197
Query: 171 PV---GTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYE 221
GT Y PE + + HG S +WS+G++ Y+++ G PF ++
Sbjct: 198 YTDFDGTRVYSPPEWIRYHR-YHGR-----SAAVWSLGILLYDMVCGDIPFEHD 245
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 71/142 (50%), Gaps = 17/142 (11%)
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
FQD VY +ME + + +++ + L + + +Y++ +++LH G +HRD+
Sbjct: 95 FQD---VYIVME-LMDANLCQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDL 146
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYT 196
KP N+++ + LK+ DFG A + + V T Y APEV+ M GY
Sbjct: 147 KPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY--VVTRYYRAPEVILGM-------GYK 197
Query: 197 GSCDLWSIGVVSYELLTGSTPF 218
+ DLWS+G + E++ F
Sbjct: 198 ENVDLWSVGCIMGEMVCHKILF 219
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 105/234 (44%), Gaps = 37/234 (15%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREK------MPNT--IER 59
++K S + + + G FG +Y + +K V +++ +PN +
Sbjct: 17 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 76
Query: 60 DIM----VKSKCPYIVNLFYSFQDMNHVYFIMEYVTG----GDFVTLLENQPHGYLSESK 111
+++ V S ++ L F+ + I+E DF+T G L E
Sbjct: 77 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT-----ERGALQEEL 131
Query: 112 ARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSAT-GHLKLTDFGSATQVDKNGRIKSIV 170
AR + +++ +AV++ H G +HRDIK +N+L+ G LKL DFGS +K V
Sbjct: 132 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL------LKDTV 185
Query: 171 PV---GTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYE 221
GT Y PE + + HG S +WS+G++ Y+++ G PF ++
Sbjct: 186 YTDFDGTRVYSPPEWIRYHR-YHGR-----SAAVWSLGILLYDMVCGDIPFEHD 233
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 99/200 (49%), Gaps = 19/200 (9%)
Query: 26 GNFGDIYLVEEKQSHNTFVMKKVLREKM-PNTI--ERDIMVKSKCPYIVNLFYSFQDMNH 82
G FG++++ H +K + + M P+ E ++M + + +V L Y+
Sbjct: 32 GQFGEVWM-GYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL-YAVVTQEP 89
Query: 83 VYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNML 142
+Y I EY+ G V L+ L+ +K ++A+ + ++ Y+HRD++ N+L
Sbjct: 90 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 149
Query: 143 LSATGHLKLTDFGSATQVDKN---GRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSC 199
+S T K+ DFG A ++ N R + P+ ++ APE + N+G+ +T
Sbjct: 150 VSDTLSCKIADFGLARLIEDNEXTAREGAKFPI---KWTAPEAI-----NYGT--FTIKS 199
Query: 200 DLWSIGVVSYELLT-GSTPF 218
D+WS G++ E++T G P+
Sbjct: 200 DVWSFGILLTEIVTHGRIPY 219
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 68/132 (51%), Gaps = 21/132 (15%)
Query: 94 DFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSAT-GHLKLT 152
DF+T G L E AR + +++ +AV++ H G +HRDIK +N+L+ G LKL
Sbjct: 103 DFIT-----ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLI 157
Query: 153 DFGSATQVDKNGRIKSIVPV---GTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSY 209
DFGS +K V GT Y PE + + HG S +WS+G++ Y
Sbjct: 158 DFGSGAL------LKDTVYTDFDGTRVYSPPEWIRYHR-YHGR-----SAAVWSLGILLY 205
Query: 210 ELLTGSTPFNYE 221
+++ G PF ++
Sbjct: 206 DMVCGDIPFEHD 217
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 68/132 (51%), Gaps = 21/132 (15%)
Query: 94 DFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSAT-GHLKLT 152
DF+T G L E AR + +++ +AV++ H G +HRDIK +N+L+ G LKL
Sbjct: 102 DFIT-----ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLI 156
Query: 153 DFGSATQVDKNGRIKSIVPV---GTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSY 209
DFGS +K V GT Y PE + + HG S +WS+G++ Y
Sbjct: 157 DFGSGAL------LKDTVYTDFDGTRVYSPPEWIRYHR-YHGR-----SAAVWSLGILLY 204
Query: 210 ELLTGSTPFNYE 221
+++ G PF ++
Sbjct: 205 DMVCGDIPFEHD 216
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 102/227 (44%), Gaps = 37/227 (16%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREK------MPNT--IERDIM---- 62
S + + + G FG +Y + +K V +++ +PN + +++
Sbjct: 56 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 115
Query: 63 VKSKCPYIVNLFYSFQDMNHVYFIMEYVTG----GDFVTLLENQPHGYLSESKARFYIYE 118
V S ++ L F+ + I+E DF+T G L E AR + ++
Sbjct: 116 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT-----ERGALQEELARSFFWQ 170
Query: 119 LAQAVQYLHGLGYVHRDIKPDNMLLSAT-GHLKLTDFGSATQVDKNGRIKSIVPV---GT 174
+ +AV++ H G +HRDIK +N+L+ G LKL DFGS +K V GT
Sbjct: 171 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL------LKDTVYTDFDGT 224
Query: 175 PEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYE 221
Y PE + + HG S +WS+G++ Y+++ G PF ++
Sbjct: 225 RVYSPPEWIRYHR-YHGR-----SAAVWSLGILLYDMVCGDIPFEHD 265
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 105/234 (44%), Gaps = 37/234 (15%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREK------MPNT--IER 59
++K S + + + G FG +Y + +K V +++ +PN +
Sbjct: 17 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 76
Query: 60 DIM----VKSKCPYIVNLFYSFQDMNHVYFIMEYVTG----GDFVTLLENQPHGYLSESK 111
+++ V S ++ L F+ + I+E DF+T G L E
Sbjct: 77 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT-----ERGALQEEL 131
Query: 112 ARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSAT-GHLKLTDFGSATQVDKNGRIKSIV 170
AR + +++ +AV++ H G +HRDIK +N+L+ G LKL DFGS +K V
Sbjct: 132 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL------LKDTV 185
Query: 171 PV---GTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYE 221
GT Y PE + + HG S +WS+G++ Y+++ G PF ++
Sbjct: 186 YTDFDGTRVYSPPEWIRYHR-YHGR-----SAAVWSLGILLYDMVCGDIPFEHD 233
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 137/342 (40%), Gaps = 84/342 (24%)
Query: 1 KDVVKELRQKNVSASDFDIKRFIQQGNFGDIYL--------VEEKQSHNT---------- 42
+D++ EL S + ++RFI G++G + V K+ NT
Sbjct: 11 RDLIAELHAMQ---SPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNIL 67
Query: 43 ---FVMKKVLRE-------KMPNTIE-RDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVT 91
F+ K+VLRE PN + RDI V + P M+ +Y + E +
Sbjct: 68 SDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEP----------AMHKLYLVTE-LM 116
Query: 92 GGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKL 151
D ++ +Q +S ++++Y + + LH G VHRD+ P N+LL+ + +
Sbjct: 117 RTDLAQVIHDQ-RIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITI 175
Query: 152 TDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYE- 210
DF A + + V Y APE++ + G+T D+WS G V E
Sbjct: 176 CDFNLAREDTADANKTHY--VTHRWYRAPELVMQFK------GFTKLVDMWSAGCVMAEM 227
Query: 211 -----LLTGSTPFNYETLDMTYSSILACDTEDTVSF--PSS------------IRLSTAM 251
L GST +N L+ + ED V F PS+ R TA+
Sbjct: 228 FNRKALFRGSTFYN--QLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAV 285
Query: 252 VNFVQSLVQKLDA---------RLNMDQVLGHPVFDCLDSDP 284
V + L A R++ +Q L HP F+ L DP
Sbjct: 286 VPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESL-FDP 326
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 106/236 (44%), Gaps = 37/236 (15%)
Query: 6 ELRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREK------MPNT--I 57
+++K S + + + G FG +Y + +K V +++ +PN +
Sbjct: 22 HMKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 81
Query: 58 ERDIM----VKSKCPYIVNLFYSFQDMNHVYFIMEYVTG----GDFVTLLENQPHGYLSE 109
+++ V S ++ L F+ + I+E DF+T G L E
Sbjct: 82 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT-----ERGALQE 136
Query: 110 SKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSAT-GHLKLTDFGSATQVDKNGRIKS 168
AR + +++ +AV++ H G +HRDIK +N+L+ G LKL DFGS +K
Sbjct: 137 ELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL------LKD 190
Query: 169 IVPV---GTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYE 221
V GT Y PE + + HG S +WS+G++ Y+++ G PF ++
Sbjct: 191 TVYTDFDGTRVYSPPEWIRYHR-YHGR-----SAAVWSLGILLYDMVCGDIPFEHD 240
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 99/200 (49%), Gaps = 19/200 (9%)
Query: 26 GNFGDIYLVEEKQSHNTFVMKKVLREKM-PNTI--ERDIMVKSKCPYIVNLFYSFQDMNH 82
G FG++++ H +K + + M P+ E ++M + + +V L Y+
Sbjct: 30 GQFGEVWM-GYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL-YAVVTQEP 87
Query: 83 VYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNML 142
+Y I EY+ G V L+ L+ +K ++A+ + ++ Y+HRD++ N+L
Sbjct: 88 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 147
Query: 143 LSATGHLKLTDFGSATQVDKN---GRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSC 199
+S T K+ DFG A ++ N R + P+ ++ APE + N+G+ +T
Sbjct: 148 VSDTLSCKIADFGLARLIEDNEYTAREGAKFPI---KWTAPEAI-----NYGT--FTIKS 197
Query: 200 DLWSIGVVSYELLT-GSTPF 218
D+WS G++ E++T G P+
Sbjct: 198 DVWSFGILLTEIVTHGRIPY 217
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 99/200 (49%), Gaps = 19/200 (9%)
Query: 26 GNFGDIYLVEEKQSHNTFVMKKVLREKM-PNTI--ERDIMVKSKCPYIVNLFYSFQDMNH 82
G FG++++ H +K + + M P+ E ++M + + +V L Y+
Sbjct: 29 GQFGEVWM-GYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL-YAVVTQEP 86
Query: 83 VYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNML 142
+Y I EY+ G V L+ L+ +K ++A+ + ++ Y+HRD++ N+L
Sbjct: 87 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 146
Query: 143 LSATGHLKLTDFGSATQVDKN---GRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSC 199
+S T K+ DFG A ++ N R + P+ ++ APE + N+G+ +T
Sbjct: 147 VSDTLSCKIADFGLARLIEDNEYTAREGAKFPI---KWTAPEAI-----NYGT--FTIKS 196
Query: 200 DLWSIGVVSYELLT-GSTPF 218
D+WS G++ E++T G P+
Sbjct: 197 DVWSFGILLTEIVTHGRIPY 216
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 105/234 (44%), Gaps = 37/234 (15%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREK------MPNT--IER 59
++K S + + + G FG +Y + +K V +++ +PN +
Sbjct: 36 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 95
Query: 60 DIM----VKSKCPYIVNLFYSFQDMNHVYFIMEYVTG----GDFVTLLENQPHGYLSESK 111
+++ V S ++ L F+ + I+E DF+T G L E
Sbjct: 96 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT-----ERGALQEEL 150
Query: 112 ARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSAT-GHLKLTDFGSATQVDKNGRIKSIV 170
AR + +++ +AV++ H G +HRDIK +N+L+ G LKL DFGS +K V
Sbjct: 151 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL------LKDTV 204
Query: 171 PV---GTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYE 221
GT Y PE + + HG S +WS+G++ Y+++ G PF ++
Sbjct: 205 YTDFDGTRVYSPPEWIRYHR-YHGR-----SAAVWSLGILLYDMVCGDIPFEHD 252
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 99/200 (49%), Gaps = 19/200 (9%)
Query: 26 GNFGDIYLVEEKQSHNTFVMKKVLREKM-PNTI--ERDIMVKSKCPYIVNLFYSFQDMNH 82
G FG++++ H +K + + M P+ E ++M + + +V L Y+
Sbjct: 25 GQFGEVWM-GYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL-YAVVTQEP 82
Query: 83 VYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNML 142
+Y I EY+ G V L+ L+ +K ++A+ + ++ Y+HRD++ N+L
Sbjct: 83 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 142
Query: 143 LSATGHLKLTDFGSATQVDKN---GRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSC 199
+S T K+ DFG A ++ N R + P+ ++ APE + N+G+ +T
Sbjct: 143 VSDTLSCKIADFGLARLIEDNEXTAREGAKFPI---KWTAPEAI-----NYGT--FTIKS 192
Query: 200 DLWSIGVVSYELLT-GSTPF 218
D+WS G++ E++T G P+
Sbjct: 193 DVWSFGILLTEIVTHGRIPY 212
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 99/200 (49%), Gaps = 19/200 (9%)
Query: 26 GNFGDIYLVEEKQSHNTFVMKKVLREKM-PNTI--ERDIMVKSKCPYIVNLFYSFQDMNH 82
G FG++++ H +K + + M P+ E ++M + + +V L Y+
Sbjct: 24 GQFGEVWM-GYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL-YAVVTQEP 81
Query: 83 VYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNML 142
+Y I EY+ G V L+ L+ +K ++A+ + ++ Y+HRD++ N+L
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 141
Query: 143 LSATGHLKLTDFGSATQVDKN---GRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSC 199
+S T K+ DFG A ++ N R + P+ ++ APE + N+G+ +T
Sbjct: 142 VSDTLSCKIADFGLARLIEDNEXTAREGAKFPI---KWTAPEAI-----NYGT--FTIKS 191
Query: 200 DLWSIGVVSYELLT-GSTPF 218
D+WS G++ E++T G P+
Sbjct: 192 DVWSFGILLTEIVTHGRIPY 211
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 68/132 (51%), Gaps = 21/132 (15%)
Query: 94 DFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSAT-GHLKLT 152
DF+T G L E AR + +++ +AV++ H G +HRDIK +N+L+ G LKL
Sbjct: 99 DFIT-----ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLI 153
Query: 153 DFGSATQVDKNGRIKSIVPV---GTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSY 209
DFGS +K V GT Y PE + + HG S +WS+G++ Y
Sbjct: 154 DFGSGAL------LKDTVYTDFDGTRVYSPPEWIRYHR-YHGR-----SAAVWSLGILLY 201
Query: 210 ELLTGSTPFNYE 221
+++ G PF ++
Sbjct: 202 DMVCGDIPFEHD 213
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 99/200 (49%), Gaps = 19/200 (9%)
Query: 26 GNFGDIYLVEEKQSHNTFVMKKVLREKM-PNTI--ERDIMVKSKCPYIVNLFYSFQDMNH 82
G FG++++ H +K + + M P+ E ++M + + +V L Y+
Sbjct: 26 GQFGEVWM-GYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL-YAVVTQEP 83
Query: 83 VYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNML 142
+Y I EY+ G V L+ L+ +K ++A+ + ++ Y+HRD++ N+L
Sbjct: 84 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 143
Query: 143 LSATGHLKLTDFGSATQVDKN---GRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSC 199
+S T K+ DFG A ++ N R + P+ ++ APE + N+G+ +T
Sbjct: 144 VSDTLSCKIADFGLARLIEDNEXTAREGAKFPI---KWTAPEAI-----NYGT--FTIKS 193
Query: 200 DLWSIGVVSYELLT-GSTPF 218
D+WS G++ E++T G P+
Sbjct: 194 DVWSFGILLTEIVTHGRIPY 213
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 99/200 (49%), Gaps = 19/200 (9%)
Query: 26 GNFGDIYLVEEKQSHNTFVMKKVLREKM-PNTI--ERDIMVKSKCPYIVNLFYSFQDMNH 82
G FG++++ H +K + + M P+ E ++M + + +V L Y+
Sbjct: 33 GQFGEVWM-GYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL-YAVVTQEP 90
Query: 83 VYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNML 142
+Y I EY+ G V L+ L+ +K ++A+ + ++ Y+HRD++ N+L
Sbjct: 91 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 150
Query: 143 LSATGHLKLTDFGSATQVDKN---GRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSC 199
+S T K+ DFG A ++ N R + P+ ++ APE + N+G+ +T
Sbjct: 151 VSDTLSCKIADFGLARLIEDNEXTAREGAKFPI---KWTAPEAI-----NYGT--FTIKS 200
Query: 200 DLWSIGVVSYELLT-GSTPF 218
D+WS G++ E++T G P+
Sbjct: 201 DVWSFGILLTEIVTHGRIPY 220
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 77/152 (50%), Gaps = 17/152 (11%)
Query: 70 IVNLFY---SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYL 126
++N+F S ++ VY +ME + + +++ + L + + +Y++ +++L
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVME-LMDANLCQVIQME----LDHERMSYLLYQMLCGIKHL 142
Query: 127 HGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWM 186
H G +HRD+KP N+++ + LK+ DFG A + ++ V T Y APEV+ M
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEP--EVVTRYYRAPEVILGM 200
Query: 187 EGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
GY + D+WS+G + E++ F
Sbjct: 201 -------GYKENVDIWSVGCIMGEMVCHKILF 225
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 99/200 (49%), Gaps = 19/200 (9%)
Query: 26 GNFGDIYLVEEKQSHNTFVMKKVLREKM-PNTI--ERDIMVKSKCPYIVNLFYSFQDMNH 82
G FG++++ H +K + + M P+ E ++M + + +V L Y+
Sbjct: 24 GQFGEVWM-GYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL-YAVVTQEP 81
Query: 83 VYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNML 142
+Y I EY+ G V L+ L+ +K ++A+ + ++ Y+HRD++ N+L
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 141
Query: 143 LSATGHLKLTDFGSATQVDKN---GRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSC 199
+S T K+ DFG A ++ N R + P+ ++ APE + N+G+ +T
Sbjct: 142 VSDTLSCKIADFGLARLIEDNEXTAREGAKFPI---KWTAPEAI-----NYGT--FTIKS 191
Query: 200 DLWSIGVVSYELLT-GSTPF 218
D+WS G++ E++T G P+
Sbjct: 192 DVWSFGILLTEIVTHGRIPY 211
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 68/132 (51%), Gaps = 21/132 (15%)
Query: 94 DFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSAT-GHLKLT 152
DF+T G L E AR + +++ +AV++ H G +HRDIK +N+L+ G LKL
Sbjct: 99 DFIT-----ERGALQEELARSFFWQVLEAVRHCHNXGVLHRDIKDENILIDLNRGELKLI 153
Query: 153 DFGSATQVDKNGRIKSIVPV---GTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSY 209
DFGS +K V GT Y PE + + HG S +WS+G++ Y
Sbjct: 154 DFGSGAL------LKDTVYTDFDGTRVYSPPEWIRYHR-YHGR-----SAAVWSLGILLY 201
Query: 210 ELLTGSTPFNYE 221
+++ G PF ++
Sbjct: 202 DMVCGDIPFEHD 213
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 68/132 (51%), Gaps = 21/132 (15%)
Query: 94 DFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSAT-GHLKLT 152
DF+T G L E AR + +++ +AV++ H G +HRDIK +N+L+ G LKL
Sbjct: 99 DFIT-----ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLI 153
Query: 153 DFGSATQVDKNGRIKSIVPV---GTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSY 209
DFGS +K V GT Y PE + + HG S +WS+G++ Y
Sbjct: 154 DFGSGAL------LKDTVYTDFDGTRVYSPPEWIRYHR-YHGR-----SAAVWSLGILLY 201
Query: 210 ELLTGSTPFNYE 221
+++ G PF ++
Sbjct: 202 DMVCGDIPFEHD 213
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 101/217 (46%), Gaps = 31/217 (14%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTI-------ERDIMVKSKCPYIVNLFY 75
+ QG FG++++ + T V K L+ P T+ E +M K + +V L Y
Sbjct: 26 LGQGCFGEVWM--GTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQL-Y 79
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
+ +Y +MEY++ G + L+ + YL + ++A + Y+ + YVHRD
Sbjct: 80 AVVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKN---GRIKSIVPVGTPEYVAPEVLEWMEGNHGS 192
++ N+L+ K+ DFG A ++ N R + P+ ++ APE +G
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI---KWTAPEA-----ALYGR 191
Query: 193 DGYTGSCDLWSIGVVSYELLT-GSTPF----NYETLD 224
+T D+WS G++ EL T G P+ N E LD
Sbjct: 192 --FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLD 226
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 99/200 (49%), Gaps = 19/200 (9%)
Query: 26 GNFGDIYLVEEKQSHNTFVMKKVLREKM-PNTI--ERDIMVKSKCPYIVNLFYSFQDMNH 82
G FG++++ H +K + + M P+ E ++M + + +V L Y+
Sbjct: 34 GQFGEVWM-GYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL-YAVVTQEP 91
Query: 83 VYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNML 142
+Y I EY+ G V L+ L+ +K ++A+ + ++ Y+HRD++ N+L
Sbjct: 92 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 151
Query: 143 LSATGHLKLTDFGSATQVDKN---GRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSC 199
+S T K+ DFG A ++ N R + P+ ++ APE + N+G+ +T
Sbjct: 152 VSDTLSCKIADFGLARLIEDNEYTAREGAKFPI---KWTAPEAI-----NYGT--FTIKS 201
Query: 200 DLWSIGVVSYELLT-GSTPF 218
D+WS G++ E++T G P+
Sbjct: 202 DVWSFGILLTEIVTHGRIPY 221
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 99/200 (49%), Gaps = 19/200 (9%)
Query: 26 GNFGDIYLVEEKQSHNTFVMKKVLREKM-PNTI--ERDIMVKSKCPYIVNLFYSFQDMNH 82
G FG++++ H +K + + M P+ E ++M + + +V L Y+
Sbjct: 24 GQFGEVWM-GYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL-YAVVTQEP 81
Query: 83 VYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNML 142
+Y I EY+ G V L+ L+ +K ++A+ + ++ Y+HRD++ N+L
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 141
Query: 143 LSATGHLKLTDFGSATQVDKN---GRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSC 199
+S T K+ DFG A ++ N R + P+ ++ APE + N+G+ +T
Sbjct: 142 VSDTLSCKIADFGLARLIEDNEYTAREGAKFPI---KWTAPEAI-----NYGT--FTIKS 191
Query: 200 DLWSIGVVSYELLT-GSTPF 218
D+WS G++ E++T G P+
Sbjct: 192 DVWSFGILLTEIVTHGRIPY 211
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 99/200 (49%), Gaps = 19/200 (9%)
Query: 26 GNFGDIYLVEEKQSHNTFVMKKVLREKM-PNTI--ERDIMVKSKCPYIVNLFYSFQDMNH 82
G FG++++ H +K + + M P+ E ++M + + +V L Y+
Sbjct: 19 GQFGEVWM-GYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL-YAVVTQEP 76
Query: 83 VYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNML 142
+Y I EY+ G V L+ L+ +K ++A+ + ++ Y+HRD++ N+L
Sbjct: 77 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 136
Query: 143 LSATGHLKLTDFGSATQVDKN---GRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSC 199
+S T K+ DFG A ++ N R + P+ ++ APE + N+G+ +T
Sbjct: 137 VSDTLSCKIADFGLARLIEDNEYTAREGAKFPI---KWTAPEAI-----NYGT--FTIKS 186
Query: 200 DLWSIGVVSYELLT-GSTPF 218
D+WS G++ E++T G P+
Sbjct: 187 DVWSFGILLTEIVTHGRIPY 206
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 71/137 (51%), Gaps = 19/137 (13%)
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
FQD VY +ME + + +++ + L + + +Y++ +++LH G +HRD+
Sbjct: 101 FQD---VYLVME-LMDANLXQVIQME----LDHERMSYLLYQMLXGIKHLHSAGIIHRDL 152
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVP-VGTPEYVAPEVLEWMEGNHGSDGY 195
KP N+++ + LK+ DFG A G + P V T Y APEV+ M GY
Sbjct: 153 KPSNIVVKSDXTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILGM-------GY 202
Query: 196 TGSCDLWSIGVVSYELL 212
+ D+WS+G + E++
Sbjct: 203 KENVDIWSVGCIMGEMV 219
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 71/137 (51%), Gaps = 19/137 (13%)
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
FQD VY +ME + + +++ + L + + +Y++ +++LH G +HRD+
Sbjct: 101 FQD---VYLVME-LMDANLXQVIQME----LDHERMSYLLYQMLXGIKHLHSAGIIHRDL 152
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVP-VGTPEYVAPEVLEWMEGNHGSDGY 195
KP N+++ + LK+ DFG A G + P V T Y APEV+ M GY
Sbjct: 153 KPSNIVVKSDXTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILGM-------GY 202
Query: 196 TGSCDLWSIGVVSYELL 212
+ D+WS+G + E++
Sbjct: 203 KENVDIWSVGCIMGEMV 219
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 71/137 (51%), Gaps = 19/137 (13%)
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
FQD VY +ME + + +++ + L + + +Y++ +++LH G +HRD+
Sbjct: 139 FQD---VYLVME-LMDANLCQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDL 190
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVP-VGTPEYVAPEVLEWMEGNHGSDGY 195
KP N+++ + LK+ DFG A G + P V T Y APEV+ M GY
Sbjct: 191 KPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILGM-------GY 240
Query: 196 TGSCDLWSIGVVSYELL 212
+ D+WS+G + E++
Sbjct: 241 KENVDIWSVGCIMGEMV 257
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 130/315 (41%), Gaps = 57/315 (18%)
Query: 13 SASDFDIKRFIQ---QGNFGDIYLVEEKQSHNTFVMKKVL----REKMPNTIERDIMVKS 65
SA+ D R I +G +G++Y + ++ T +K++ E +P T R++ +
Sbjct: 29 SATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLK 88
Query: 66 KCPY--IVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAV 123
+ + I+ L + ++ I EY D ++ P +S + ++Y+L V
Sbjct: 89 ELQHRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPD--VSMRVIKSFLYQLINGV 145
Query: 124 QYLHGLGYVHRDIKPDNMLLSA-----TGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYV 178
+ H +HRD+KP N+LLS T LK+ DFG A R + + T Y
Sbjct: 146 NFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIR-QFTHEIITLWYR 204
Query: 179 APEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYET-LDMTYSSILACDTED 237
PE+L GS Y+ S D+WSI + E+L + F ++ +D + D
Sbjct: 205 PPEILL------GSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPD 258
Query: 238 TVSFPSSIRLSTAMVNFVQSLVQ--------------------KLDARLNMDQV------ 271
++P TA+ ++ QS + L A L MD V
Sbjct: 259 DTTWPG----VTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAK 314
Query: 272 --LGHPVFDCLDSDP 284
L HP F D DP
Sbjct: 315 NALEHPYFSHNDFDP 329
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 71/137 (51%), Gaps = 19/137 (13%)
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
FQD VY +ME + + +++ + L + + +Y++ +++LH G +HRD+
Sbjct: 102 FQD---VYLVME-LMDANLCQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDL 153
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVP-VGTPEYVAPEVLEWMEGNHGSDGY 195
KP N+++ + LK+ DFG A G + P V T Y APEV+ M GY
Sbjct: 154 KPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILGM-------GY 203
Query: 196 TGSCDLWSIGVVSYELL 212
+ D+WS+G + E++
Sbjct: 204 KENVDIWSVGCIMGEMV 220
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 71/137 (51%), Gaps = 19/137 (13%)
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
FQD VY +ME + + +++ + L + + +Y++ +++LH G +HRD+
Sbjct: 101 FQD---VYLVME-LMDANLCQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDL 152
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVP-VGTPEYVAPEVLEWMEGNHGSDGY 195
KP N+++ + LK+ DFG A G + P V T Y APEV+ M GY
Sbjct: 153 KPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILGM-------GY 202
Query: 196 TGSCDLWSIGVVSYELL 212
+ D+WS+G + E++
Sbjct: 203 KENVDIWSVGCIMGEMV 219
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 80/162 (49%), Gaps = 12/162 (7%)
Query: 119 LAQAVQYLHG-LGYVHRDIKPDNMLLSATGHLKLTDFG-SATQVDKNGRIKSIVPVGTPE 176
+ +A+++LH L +HRD+KP N+L++A G +K+ DFG S VD + + G
Sbjct: 118 IVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDD---VAKDIDAGCKP 174
Query: 177 YVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTE 236
Y+APE + E N GY+ D+WS+G+ EL F Y++ + + E
Sbjct: 175 YMAPERIN-PELNQ--KGYSVKSDIWSLGITMIEL--AILRFPYDSWGTPFQQLKQVVEE 229
Query: 237 DTVSFPSSIRLSTAMVNFV-QSLVQKLDARLNMDQVLGHPVF 277
+ P+ + S V+F Q L + R +++ HP F
Sbjct: 230 PSPQLPAD-KFSAEFVDFTSQCLKKNSKERPTYPELMQHPFF 270
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 70/136 (51%), Gaps = 17/136 (12%)
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
FQD VY +ME + + +++ + L + + +Y++ +++LH G +HRD+
Sbjct: 101 FQD---VYLVME-LMDANLCQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDL 152
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYT 196
KP N+++ + LK+ DFG A + + V T Y APEV+ M GY
Sbjct: 153 KPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY--VVTRYYRAPEVILGM-------GYK 203
Query: 197 GSCDLWSIGVVSYELL 212
+ D+WS+G + E++
Sbjct: 204 ENVDIWSVGCIMGEMV 219
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 71/137 (51%), Gaps = 19/137 (13%)
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
FQD VY +ME + + +++ + L + + +Y++ +++LH G +HRD+
Sbjct: 102 FQD---VYLVME-LMDANLCQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDL 153
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVP-VGTPEYVAPEVLEWMEGNHGSDGY 195
KP N+++ + LK+ DFG A G + P V T Y APEV+ M GY
Sbjct: 154 KPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILGM-------GY 203
Query: 196 TGSCDLWSIGVVSYELL 212
+ D+WS+G + E++
Sbjct: 204 KENVDIWSVGCIMGEMV 220
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 70/136 (51%), Gaps = 17/136 (12%)
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
FQD VY +ME + + +++ + L + + +Y++ +++LH G +HRD+
Sbjct: 100 FQD---VYLVME-LMDANLCQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDL 151
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYT 196
KP N+++ + LK+ DFG A + + V T Y APEV+ M GY
Sbjct: 152 KPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY--VVTRYYRAPEVILGM-------GYK 202
Query: 197 GSCDLWSIGVVSYELL 212
+ D+WS+G + E++
Sbjct: 203 ENVDIWSVGCIMGEMV 218
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 72/143 (50%), Gaps = 19/143 (13%)
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
FQD VY +ME + + +++ + L + + +Y++ +++LH G +HRD+
Sbjct: 101 FQD---VYLVME-LMDANLCQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDL 152
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVP-VGTPEYVAPEVLEWMEGNHGSDGY 195
KP N+++ + LK+ DFG A G + P V T Y APEV+ M GY
Sbjct: 153 KPSNIVVKSDXTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILGM-------GY 202
Query: 196 TGSCDLWSIGVVSYELLTGSTPF 218
+ D+WS+G + E++ F
Sbjct: 203 KENVDIWSVGCIMGEMVRHKILF 225
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 71/137 (51%), Gaps = 19/137 (13%)
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
FQD VY +ME + + +++ + L + + +Y++ +++LH G +HRD+
Sbjct: 139 FQD---VYLVME-LMDANLCQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDL 190
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVP-VGTPEYVAPEVLEWMEGNHGSDGY 195
KP N+++ + LK+ DFG A G + P V T Y APEV+ M GY
Sbjct: 191 KPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILGM-------GY 240
Query: 196 TGSCDLWSIGVVSYELL 212
+ D+WS+G + E++
Sbjct: 241 KENVDIWSVGCIMGEMV 257
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 70/136 (51%), Gaps = 17/136 (12%)
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
FQD VY +ME + + +++ + L + + +Y++ +++LH G +HRD+
Sbjct: 94 FQD---VYLVME-LMDANLXQVIQME----LDHERMSYLLYQMLXGIKHLHSAGIIHRDL 145
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYT 196
KP N+++ + LK+ DFG A + + V T Y APEV+ M GY
Sbjct: 146 KPSNIVVKSDXTLKILDFGLARTAGTSFMMTPY--VVTRYYRAPEVILGM-------GYK 196
Query: 197 GSCDLWSIGVVSYELL 212
+ D+WS+G + E++
Sbjct: 197 ENVDIWSVGCIMGEMV 212
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 70/136 (51%), Gaps = 17/136 (12%)
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
FQD VY +ME + + +++ + L + + +Y++ +++LH G +HRD+
Sbjct: 95 FQD---VYLVME-LMDANLCQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDL 146
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYT 196
KP N+++ + LK+ DFG A + + V T Y APEV+ M GY
Sbjct: 147 KPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY--VVTRYYRAPEVILGM-------GYK 197
Query: 197 GSCDLWSIGVVSYELL 212
+ D+WS+G + E++
Sbjct: 198 ENVDIWSVGCIMGEMV 213
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 101/217 (46%), Gaps = 31/217 (14%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTI-------ERDIMVKSKCPYIVNLFY 75
+ QG FG++++ + T V K L+ P T+ E +M K + +V L Y
Sbjct: 26 LGQGCFGEVWM--GTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQL-Y 79
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
+ +Y ++EY++ G + L+ + YL + ++A + Y+ + YVHRD
Sbjct: 80 AVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKN---GRIKSIVPVGTPEYVAPEVLEWMEGNHGS 192
++ N+L+ K+ DFG A ++ N R + P+ ++ APE +G
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPI---KWTAPEA-----ALYGR 191
Query: 193 DGYTGSCDLWSIGVVSYELLT-GSTPF----NYETLD 224
+T D+WS G++ EL T G P+ N E LD
Sbjct: 192 --FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLD 226
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 70/136 (51%), Gaps = 17/136 (12%)
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
FQD VY +ME + + +++ + L + + +Y++ +++LH G +HRD+
Sbjct: 95 FQD---VYLVME-LMDANLCQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDL 146
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYT 196
KP N+++ + LK+ DFG A + + V T Y APEV+ M GY
Sbjct: 147 KPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY--VVTRYYRAPEVILGM-------GYK 197
Query: 197 GSCDLWSIGVVSYELL 212
+ D+WS+G + E++
Sbjct: 198 ENVDIWSVGCIMGEMV 213
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 70/136 (51%), Gaps = 17/136 (12%)
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
FQD VY +ME + + +++ + L + + +Y++ +++LH G +HRD+
Sbjct: 94 FQD---VYLVME-LMDANLCQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDL 145
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYT 196
KP N+++ + LK+ DFG A + + V T Y APEV+ M GY
Sbjct: 146 KPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY--VVTRYYRAPEVILGM-------GYK 196
Query: 197 GSCDLWSIGVVSYELL 212
+ D+WS+G + E++
Sbjct: 197 ENVDIWSVGCIMGEMV 212
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 107/244 (43%), Gaps = 42/244 (17%)
Query: 5 KELRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKV---LREKMPNTIERD- 60
K +++K+ +D+ I R + QG F I L E + + + +KK L EK + + +
Sbjct: 21 KYVKEKDKYINDYRIIRTLNQGKFNKIILCE--KDNKFYALKKYEKSLLEKKRDFTKSNN 78
Query: 61 --IMVKSKCPYIVNLFYSFQDM---------------NHVYFIMEYVTGG------DFVT 97
I +KSK N D+ + VY I EY+ ++
Sbjct: 79 DKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFF 138
Query: 98 LLENQPHGYLSESKARFYIYELAQAVQYLHG-LGYVHRDIKPDNMLLSATGHLKLTDFG- 155
+L+ ++ + I + + Y+H HRD+KP N+L+ G +KL+DFG
Sbjct: 139 VLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGE 198
Query: 156 SATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGS-CDLWSIGVVSYELLTG 214
S VDK +IK GT E++ PE N S Y G+ D+WS+G+ Y +
Sbjct: 199 SEYMVDK--KIKG--SRGTYEFMPPEFF----SNESS--YNGAKVDIWSLGICLYVMFYN 248
Query: 215 STPF 218
PF
Sbjct: 249 VVPF 252
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 65/137 (47%), Gaps = 14/137 (10%)
Query: 85 FIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLS 144
I EYV DF L L++ R+YIYEL +A+ Y H G +HRD+KP N+++
Sbjct: 105 LIFEYVNNTDFKVLYPT-----LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID 159
Query: 145 A-TGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWS 203
L+L D+G A V V + + PE+L ++ Y S D+WS
Sbjct: 160 HELRKLRLIDWGLAEFYHPGKEYN--VRVASRYFKGPELLVDLQ------DYDYSLDMWS 211
Query: 204 IGVVSYELLTGSTPFNY 220
+G + ++ PF Y
Sbjct: 212 LGCMFAGMIFRKEPFFY 228
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 65/137 (47%), Gaps = 14/137 (10%)
Query: 85 FIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLS 144
I EYV DF L L++ R+YIYEL +A+ Y H G +HRD+KP N+++
Sbjct: 106 LIFEYVNNTDFKVLYPT-----LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID 160
Query: 145 A-TGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWS 203
L+L D+G A V V + + PE+L ++ Y S D+WS
Sbjct: 161 HELRKLRLIDWGLAEFYHPGKEYN--VRVASRYFKGPELLVDLQ------DYDYSLDMWS 212
Query: 204 IGVVSYELLTGSTPFNY 220
+G + ++ PF Y
Sbjct: 213 LGCMFAGMIFRKEPFFY 229
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 71/137 (51%), Gaps = 19/137 (13%)
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
FQD VY +ME + + +++ + L + + +Y++ +++LH G +HRD+
Sbjct: 101 FQD---VYLVME-LMDANLXQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDL 152
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVP-VGTPEYVAPEVLEWMEGNHGSDGY 195
KP N+++ + LK+ DFG A G + P V T Y APEV+ M GY
Sbjct: 153 KPSNIVVKSDXTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILGM-------GY 202
Query: 196 TGSCDLWSIGVVSYELL 212
+ D+WS+G + E++
Sbjct: 203 KENVDIWSVGCIMGEMV 219
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 99/217 (45%), Gaps = 31/217 (14%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTI-------ERDIMVKSKCPYIVNLFY 75
+ QG FG++++ + T V K L+ P T+ E +M K + +V L Y
Sbjct: 275 LGQGCFGEVWM--GTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQL-Y 328
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
+ +Y + EY++ G + L+ + YL + ++A + Y+ + YVHRD
Sbjct: 329 AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 388
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKN---GRIKSIVPVGTPEYVAPEVLEWMEGNHGS 192
++ N+L+ K+ DFG A ++ N R + P+ ++ APE +
Sbjct: 389 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI---KWTAPEAALYGR----- 440
Query: 193 DGYTGSCDLWSIGVVSYELLT-GSTPF----NYETLD 224
+T D+WS G++ EL T G P+ N E LD
Sbjct: 441 --FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLD 475
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 31/217 (14%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTI-------ERDIMVKSKCPYIVNLFY 75
+ QG FG++++ + T V K L+ P T+ E +M K + +V L Y
Sbjct: 19 LGQGCFGEVWM--GTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQL-Y 72
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
+ +Y + EY++ G + L+ + YL + ++A + Y+ + YVHRD
Sbjct: 73 AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 132
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKN---GRIKSIVPVGTPEYVAPEVLEWMEGNHGS 192
++ N+L+ K+ DFG A ++ N R + P+ ++ APE +G
Sbjct: 133 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI---KWTAPEA-----ALYGR 184
Query: 193 DGYTGSCDLWSIGVVSYELLT-GSTPF----NYETLD 224
+T D+WS G++ EL T G P+ N E LD
Sbjct: 185 --FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLD 219
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 65/137 (47%), Gaps = 14/137 (10%)
Query: 85 FIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLS 144
I EYV DF L L++ R+YIYEL +A+ Y H G +HRD+KP N+++
Sbjct: 106 LIFEYVNNTDFKVLYPT-----LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID 160
Query: 145 A-TGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWS 203
L+L D+G A V V + + PE+L ++ Y S D+WS
Sbjct: 161 HELRKLRLIDWGLAEFYHPGKEYN--VRVASRYFKGPELLVDLQ------DYDYSLDMWS 212
Query: 204 IGVVSYELLTGSTPFNY 220
+G + ++ PF Y
Sbjct: 213 LGCMFAGMIFRKEPFFY 229
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 103/237 (43%), Gaps = 49/237 (20%)
Query: 17 FDIKRFIQQGNFGDIYL---VEEKQSHNTFVMKKVLREKMPNTIERDIMVKSKCPYI--- 70
F + R + G FG + L ++ K+ + V++ + + IE DI+ K + I
Sbjct: 37 FLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNN 96
Query: 71 --VNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHG 128
V F +H+ I E + + + N +G+ E + Y E+ +A+ YL
Sbjct: 97 NIVKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIED-IKLYCIEILKALNYLRK 155
Query: 129 LGYVHRDIKPDNMLL--------------------------SATGHLKLTDFGSAT-QVD 161
+ H D+KP+N+LL +TG +KL DFG AT + D
Sbjct: 156 MSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTG-IKLIDFGCATFKSD 214
Query: 162 KNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
+G I + T +Y APEV+ + G+ S D+WS G V EL TGS F
Sbjct: 215 YHGSI-----INTRQYRAPEVIL-------NLGWDVSSDMWSFGCVLAELYTGSLLF 259
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 72/126 (57%), Gaps = 25/126 (19%)
Query: 99 LENQPHGYLSESKARFYIY-ELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSA 157
LE++ HG +I+ ++A+AV++LH G +HRD+KP N+ + +K+ DFG
Sbjct: 158 LEDREHGVC------LHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLV 211
Query: 158 TQVDKNGRIKSIVP-----------VGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGV 206
T +D++ ++++ VGT Y++PE + HG++ Y+ D++S+G+
Sbjct: 212 TAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQI------HGNN-YSHKVDIFSLGL 264
Query: 207 VSYELL 212
+ +ELL
Sbjct: 265 ILFELL 270
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 101/217 (46%), Gaps = 31/217 (14%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTI-------ERDIMVKSKCPYIVNLFY 75
+ QG FG++++ + T V K L+ P T+ E +M K + +V L Y
Sbjct: 26 LGQGCFGEVWM--GTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQL-Y 79
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
+ +Y ++EY++ G + L+ + YL + ++A + Y+ + YVHRD
Sbjct: 80 AVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKN---GRIKSIVPVGTPEYVAPEVLEWMEGNHGS 192
++ N+L+ K+ DFG A ++ N R + P+ ++ APE +G
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI---KWTAPEA-----ALYGR 191
Query: 193 DGYTGSCDLWSIGVVSYELLT-GSTPF----NYETLD 224
+T D+WS G++ EL T G P+ N E LD
Sbjct: 192 --FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLD 226
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 65/137 (47%), Gaps = 14/137 (10%)
Query: 85 FIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLS 144
I EYV DF L L++ R+YIYEL +A+ Y H G +HRD+KP N+++
Sbjct: 105 LIFEYVNNTDFKVLYPT-----LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID 159
Query: 145 A-TGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWS 203
L+L D+G A V V + + PE+L ++ Y S D+WS
Sbjct: 160 HELRKLRLIDWGLAEFYHPGKEYN--VRVASRYFKGPELLVDLQ------DYDYSLDMWS 211
Query: 204 IGVVSYELLTGSTPFNY 220
+G + ++ PF Y
Sbjct: 212 LGCMFAGMIFRKEPFFY 228
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 65/137 (47%), Gaps = 14/137 (10%)
Query: 85 FIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLS 144
I EYV DF L L++ R+YIYEL +A+ Y H G +HRD+KP N+++
Sbjct: 107 LIFEYVNNTDFKVLYPT-----LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID 161
Query: 145 A-TGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWS 203
L+L D+G A V V + + PE+L ++ Y S D+WS
Sbjct: 162 HELRKLRLIDWGLAEFYHPGKEYN--VRVASRYFKGPELLVDLQ------DYDYSLDMWS 213
Query: 204 IGVVSYELLTGSTPFNY 220
+G + ++ PF Y
Sbjct: 214 LGCMFAGMIFRKEPFFY 230
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 65/137 (47%), Gaps = 14/137 (10%)
Query: 85 FIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLS 144
I EYV DF L L++ R+YIYEL +A+ Y H G +HRD+KP N+++
Sbjct: 105 LIFEYVNNTDFKVLYPT-----LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID 159
Query: 145 A-TGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWS 203
L+L D+G A V V + + PE+L ++ Y S D+WS
Sbjct: 160 HELRKLRLIDWGLAEFYHPGKEYN--VRVASRYFKGPELLVDLQ------DYDYSLDMWS 211
Query: 204 IGVVSYELLTGSTPFNY 220
+G + ++ PF Y
Sbjct: 212 LGCMFAGMIFRKEPFFY 228
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 65/137 (47%), Gaps = 14/137 (10%)
Query: 85 FIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLS 144
I EYV DF L L++ R+YIYEL +A+ Y H G +HRD+KP N+++
Sbjct: 105 LIFEYVNNTDFKVLYPT-----LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID 159
Query: 145 A-TGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWS 203
L+L D+G A V V + + PE+L ++ Y S D+WS
Sbjct: 160 HELRKLRLIDWGLAEFYHPGKEYN--VRVASRYFKGPELLVDLQ------DYDYSLDMWS 211
Query: 204 IGVVSYELLTGSTPFNY 220
+G + ++ PF Y
Sbjct: 212 LGCMFAGMIFRKEPFFY 228
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 65/137 (47%), Gaps = 14/137 (10%)
Query: 85 FIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLS 144
I EYV DF L L++ R+YIYEL +A+ Y H G +HRD+KP N+++
Sbjct: 105 LIFEYVNNTDFKVLYPT-----LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID 159
Query: 145 A-TGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWS 203
L+L D+G A V V + + PE+L ++ Y S D+WS
Sbjct: 160 HELRKLRLIDWGLAEFYHPGKEYN--VRVASRYFKGPELLVDLQ------DYDYSLDMWS 211
Query: 204 IGVVSYELLTGSTPFNY 220
+G + ++ PF Y
Sbjct: 212 LGCMFAGMIFRKEPFFY 228
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 31/217 (14%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTI-------ERDIMVKSKCPYIVNLFY 75
+ QG FG++++ + T V K L+ P T+ E +M K + +V L Y
Sbjct: 192 LGQGCFGEVWM--GTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQL-Y 245
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
+ +Y + EY++ G + L+ + YL + ++A + Y+ + YVHRD
Sbjct: 246 AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 305
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKN---GRIKSIVPVGTPEYVAPEVLEWMEGNHGS 192
++ N+L+ K+ DFG A ++ N R + P+ ++ APE + G
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI---KWTAPEAA--LYGR--- 357
Query: 193 DGYTGSCDLWSIGVVSYELLT-GSTPF----NYETLD 224
+T D+WS G++ EL T G P+ N E LD
Sbjct: 358 --FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLD 392
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 65/137 (47%), Gaps = 14/137 (10%)
Query: 85 FIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLS 144
I EYV DF L L++ R+YIYEL +A+ Y H G +HRD+KP N+++
Sbjct: 105 LIFEYVNNTDFKVLYPT-----LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID 159
Query: 145 A-TGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWS 203
L+L D+G A V V + + PE+L ++ Y S D+WS
Sbjct: 160 HELRKLRLIDWGLAEFYHPGKEYN--VRVASRYFKGPELLVDLQ------DYDYSLDMWS 211
Query: 204 IGVVSYELLTGSTPFNY 220
+G + ++ PF Y
Sbjct: 212 LGCMFAGMIFRKEPFFY 228
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 80/164 (48%), Gaps = 19/164 (11%)
Query: 106 YLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQ--VDKN 163
+L+E + + + + + ++ +H GY HRD+KP N+LL G L D GS Q +
Sbjct: 130 FLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVE 189
Query: 164 GRIKSI------VPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTP 217
G +++ T Y APE+ ++ + D T D+WS+G V Y ++ G P
Sbjct: 190 GSRQALTLQDWAAQRCTISYRAPELFS-VQSHCVIDERT---DVWSLGCVLYAMMFGEGP 245
Query: 218 FNYETLDMTY--SSILACDTEDTVSFPSSIRLSTAMVNFVQSLV 259
+ DM + +A ++ +S P S R S+A+ + S++
Sbjct: 246 Y-----DMVFQKGDSVALAVQNQLSIPQSPRHSSALWQLLNSMM 284
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 31/217 (14%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTI-------ERDIMVKSKCPYIVNLFY 75
+ QG FG++++ + T V K L+ P T+ E +M K + +V L Y
Sbjct: 192 LGQGCFGEVWM--GTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQL-Y 245
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
+ +Y + EY++ G + L+ + YL + ++A + Y+ + YVHRD
Sbjct: 246 AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 305
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKN---GRIKSIVPVGTPEYVAPEVLEWMEGNHGS 192
++ N+L+ K+ DFG A ++ N R + P+ ++ APE + G
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI---KWTAPEAA--LYGR--- 357
Query: 193 DGYTGSCDLWSIGVVSYELLT-GSTPF----NYETLD 224
+T D+WS G++ EL T G P+ N E LD
Sbjct: 358 --FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLD 392
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 65/137 (47%), Gaps = 14/137 (10%)
Query: 85 FIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLS 144
I EYV DF L L++ R+YIYEL +A+ Y H G +HRD+KP N+++
Sbjct: 126 LIFEYVNNTDFKVLYPT-----LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID 180
Query: 145 A-TGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWS 203
L+L D+G A V V + + PE+L ++ Y S D+WS
Sbjct: 181 HELRKLRLIDWGLAEFYHPGKEYN--VRVASRYFKGPELLVDLQ------DYDYSLDMWS 232
Query: 204 IGVVSYELLTGSTPFNY 220
+G + ++ PF Y
Sbjct: 233 LGCMFAGMIFRKEPFFY 249
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 99/211 (46%), Gaps = 30/211 (14%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPN-----TIERDIMVKSKCPYI-VNLFYS 76
I G+FG +Y K + V K+L P + ++ V K ++ + LF
Sbjct: 32 IGSGSFGTVY----KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYEL-------AQAVQYLHGL 129
+ + + ++ G + +L S+ +F + +L A+ + YLH
Sbjct: 88 YSTAPQLAIVTQWCEGSSL--------YHHLHASETKFEMKKLIDIARQTARGMDYLHAK 139
Query: 130 GYVHRDIKPDNMLLSATGHLKLTDFGSATQVDK-NGRIKSIVPVGTPEYVAPEVLEWMEG 188
+HRD+K +N+ L +K+ DFG AT+ + +G + G+ ++APEV+ +
Sbjct: 140 SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD- 198
Query: 189 NHGSDGYTGSCDLWSIGVVSYELLTGSTPFN 219
S+ Y+ D+++ G+V YEL+TG P++
Sbjct: 199 ---SNPYSFQSDVYAFGIVLYELMTGQLPYS 226
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 31/217 (14%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTI-------ERDIMVKSKCPYIVNLFY 75
+ QG FG++++ + T V K L+ P T+ E +M K + +V L Y
Sbjct: 192 LGQGCFGEVWM--GTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQL-Y 245
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
+ +Y + EY++ G + L+ + YL + ++A + Y+ + YVHRD
Sbjct: 246 AVVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 305
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKN---GRIKSIVPVGTPEYVAPEVLEWMEGNHGS 192
++ N+L+ K+ DFG A ++ N R + P+ ++ APE + G
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI---KWTAPEAA--LYGR--- 357
Query: 193 DGYTGSCDLWSIGVVSYELLT-GSTPF----NYETLD 224
+T D+WS G++ EL T G P+ N E LD
Sbjct: 358 --FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLD 392
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 56/111 (50%), Gaps = 10/111 (9%)
Query: 115 YIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVP--- 171
Y + +AV +H G VH D+KP N L+ G LKL DFG A Q+ + S+V
Sbjct: 160 YWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPD--TTSVVKDSQ 216
Query: 172 VGTPEYVAPEVLEWM----EGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
VGT Y+ PE ++ M E + D+WS+G + Y + G TPF
Sbjct: 217 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 267
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 31/217 (14%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTI-------ERDIMVKSKCPYIVNLFY 75
+ QG FG++++ + T V K L+ P T+ E +M K + +V L Y
Sbjct: 26 LGQGCFGEVWM--GTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQL-Y 79
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
+ +Y + EY++ G + L+ + YL + ++A + Y+ + YVHRD
Sbjct: 80 AVVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKN---GRIKSIVPVGTPEYVAPEVLEWMEGNHGS 192
++ N+L+ K+ DFG A ++ N R + P+ ++ APE +G
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI---KWTAPEA-----ALYGR 191
Query: 193 DGYTGSCDLWSIGVVSYELLT-GSTPF----NYETLD 224
+T D+WS G++ EL T G P+ N E LD
Sbjct: 192 --FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLD 226
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 31/217 (14%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTI-------ERDIMVKSKCPYIVNLFY 75
+ QG FG++++ + T V K L+ P T+ E +M K + +V L Y
Sbjct: 17 LGQGCFGEVWM--GTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQL-Y 70
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
+ +Y + EY++ G + L+ + YL + ++A + Y+ + YVHRD
Sbjct: 71 AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 130
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKN---GRIKSIVPVGTPEYVAPEVLEWMEGNHGS 192
++ N+L+ K+ DFG A ++ N R + P+ ++ APE +G
Sbjct: 131 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI---KWTAPEA-----ALYGR 182
Query: 193 DGYTGSCDLWSIGVVSYELLT-GSTPF----NYETLD 224
+T D+WS G++ EL T G P+ N E LD
Sbjct: 183 --FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLD 217
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 25/219 (11%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMVKSKC---PYIVN 72
D+ + R + +G + +++ ++N V+ K+L+ N I+R+I + P I+
Sbjct: 38 DYQLVRKLGRGKYSEVFEAI-NITNNEKVVVKILKPVKKNKIKREIKILENLRGGPNIIT 96
Query: 73 LFYSFQD--MNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLG 130
L +D + E+V DF L + L++ RFY+YE+ +A+ Y H +G
Sbjct: 97 LADIVKDPVSRTPALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMG 151
Query: 131 YVHRDIKPDNMLLSATGH-LKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGN 189
+HRD+KP N+++ L+L D+G A V V + + PE+L
Sbjct: 152 IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYN--VRVASRYFKGPELLV----- 204
Query: 190 HGSDGYTGSCDLWSIGVVSYELLTGSTPF-----NYETL 223
Y S D+WS+G + ++ PF NY+ L
Sbjct: 205 -DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 99/217 (45%), Gaps = 31/217 (14%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTI-------ERDIMVKSKCPYIVNLFY 75
+ QG FG++++ + T V K L+ P T+ E +M K + +V L Y
Sbjct: 23 LGQGCFGEVWM--GTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQL-Y 76
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
+ +Y + EY+ G + L+ + YL + ++A + Y+ + YVHRD
Sbjct: 77 AVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRD 136
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKN---GRIKSIVPVGTPEYVAPEVLEWMEGNHGS 192
++ N+L+ K+ DFG A ++ N R + P+ ++ APE +G
Sbjct: 137 LRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPI---KWTAPEA-----ALYGR 188
Query: 193 DGYTGSCDLWSIGVVSYELLT-GSTPF----NYETLD 224
+T D+WS G++ EL T G P+ N E LD
Sbjct: 189 --FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLD 223
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 31/217 (14%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTI-------ERDIMVKSKCPYIVNLFY 75
+ QG FG++++ + T V K L+ P T+ E +M K + +V L Y
Sbjct: 15 LGQGCFGEVWM--GTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQL-Y 68
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
+ +Y + EY++ G + L+ + YL + ++A + Y+ + YVHRD
Sbjct: 69 AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 128
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKN---GRIKSIVPVGTPEYVAPEVLEWMEGNHGS 192
++ N+L+ K+ DFG A ++ N R + P+ ++ APE +G
Sbjct: 129 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI---KWTAPEA-----ALYGR 180
Query: 193 DGYTGSCDLWSIGVVSYELLT-GSTPF----NYETLD 224
+T D+WS G++ EL T G P+ N E LD
Sbjct: 181 --FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLD 215
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 31/217 (14%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTI-------ERDIMVKSKCPYIVNLFY 75
+ QG FG++++ + T V K L+ P T+ E +M K + +V L Y
Sbjct: 26 LGQGCFGEVWM--GTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKIRHEKLVQL-Y 79
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
+ +Y + EY++ G + L+ + YL + ++A + Y+ + YVHRD
Sbjct: 80 AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKN---GRIKSIVPVGTPEYVAPEVLEWMEGNHGS 192
++ N+L+ K+ DFG A ++ N R + P+ ++ APE +G
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI---KWTAPEA-----ALYGR 191
Query: 193 DGYTGSCDLWSIGVVSYELLT-GSTPF----NYETLD 224
+T D+WS G++ EL T G P+ N E LD
Sbjct: 192 --FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLD 226
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 56/111 (50%), Gaps = 10/111 (9%)
Query: 115 YIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVP--- 171
Y + +AV +H G VH D+KP N L+ G LKL DFG A Q+ + S+V
Sbjct: 160 YWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPD--TTSVVKDSQ 216
Query: 172 VGTPEYVAPEVLEWM----EGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
VGT Y+ PE ++ M E + D+WS+G + Y + G TPF
Sbjct: 217 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 267
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 101/207 (48%), Gaps = 26/207 (12%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTI-------ERDIMVKSKCPYIVNLFY 75
+ G FG++++ +++T V K L+ P T+ E ++M + +V L+
Sbjct: 20 LGAGQFGEVWM--GYYNNSTKVAVKTLK---PGTMSVQAFLEEANLMKTLQHDKLVRLYA 74
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
+Y I E++ G + L++ G + K + ++A+ + Y+ Y+HRD
Sbjct: 75 VVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRD 134
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKN---GRIKSIVPVGTPEYVAPEVLEWMEGNHGS 192
++ N+L+S + K+ DFG A ++ N R + P+ ++ APE + N G
Sbjct: 135 LRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPI---KWTAPEAI-----NFGC 186
Query: 193 DGYTGSCDLWSIGVVSYELLT-GSTPF 218
+T ++WS G++ YE++T G P+
Sbjct: 187 --FTIKSNVWSFGILLYEIVTYGKIPY 211
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 31/217 (14%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTI-------ERDIMVKSKCPYIVNLFY 75
+ QG FG++++ + T V K L+ P T+ E +M K + +V L Y
Sbjct: 26 LGQGCFGEVWM--GTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQL-Y 79
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
+ +Y + EY++ G + L+ + YL + ++A + Y+ + YVHRD
Sbjct: 80 AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKN---GRIKSIVPVGTPEYVAPEVLEWMEGNHGS 192
++ N+L+ K+ DFG A ++ N R + P+ ++ APE +G
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI---KWTAPEA-----ALYGR 191
Query: 193 DGYTGSCDLWSIGVVSYELLT-GSTPF----NYETLD 224
+T D+WS G++ EL T G P+ N E LD
Sbjct: 192 --FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLD 226
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 99/211 (46%), Gaps = 30/211 (14%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPN-----TIERDIMVKSKCPYI-VNLFYS 76
I G+FG +Y K + V K+L P + ++ V K ++ + LF
Sbjct: 32 IGSGSFGTVY----KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYEL-------AQAVQYLHGL 129
+ + + ++ G + +L S+ +F + +L A+ + YLH
Sbjct: 88 YSTKPQLAIVTQWCEGSSL--------YHHLHASETKFEMKKLIDIARQTARGMDYLHAK 139
Query: 130 GYVHRDIKPDNMLLSATGHLKLTDFGSATQVDK-NGRIKSIVPVGTPEYVAPEVLEWMEG 188
+HRD+K +N+ L +K+ DFG AT+ + +G + G+ ++APEV+ +
Sbjct: 140 SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD- 198
Query: 189 NHGSDGYTGSCDLWSIGVVSYELLTGSTPFN 219
S+ Y+ D+++ G+V YEL+TG P++
Sbjct: 199 ---SNPYSFQSDVYAFGIVLYELMTGQLPYS 226
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 56/111 (50%), Gaps = 10/111 (9%)
Query: 115 YIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVP--- 171
Y + +AV +H G VH D+KP N L+ G LKL DFG A Q+ + S+V
Sbjct: 113 YWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPD--TTSVVKDSQ 169
Query: 172 VGTPEYVAPEVLEWM----EGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
VGT Y+ PE ++ M E + D+WS+G + Y + G TPF
Sbjct: 170 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 220
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 55/110 (50%), Gaps = 8/110 (7%)
Query: 115 YIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQV--DKNGRIKSIVPV 172
Y + +AV +H G VH D+KP N L+ G LKL DFG A Q+ D +K V
Sbjct: 132 YWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKD-SQV 189
Query: 173 GTPEYVAPEVLEWM----EGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
GT Y+ PE ++ M E + D+WS+G + Y + G TPF
Sbjct: 190 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 239
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 99/217 (45%), Gaps = 31/217 (14%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTI-------ERDIMVKSKCPYIVNLFY 75
+ QG FG++++ + T V K L+ P T+ E +M K + +V L Y
Sbjct: 23 LGQGCFGEVWM--GTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQL-Y 76
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
+ +Y + EY+ G + L+ + YL + ++A + Y+ + YVHRD
Sbjct: 77 AVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRD 136
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKN---GRIKSIVPVGTPEYVAPEVLEWMEGNHGS 192
++ N+L+ K+ DFG A ++ N R + P+ ++ APE +G
Sbjct: 137 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI---KWTAPEA-----ALYGR 188
Query: 193 DGYTGSCDLWSIGVVSYELLT-GSTPF----NYETLD 224
+T D+WS G++ EL T G P+ N E LD
Sbjct: 189 --FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLD 223
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 100/203 (49%), Gaps = 19/203 (9%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVLREKM-PNTI--ERDIMVKSKCPYIVNLFYSFQD 79
+ G FG++++ H +K + + M P+ E ++M + + +V L Y+
Sbjct: 17 LGAGQFGEVWM-GYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL-YAVVT 74
Query: 80 MNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPD 139
+Y I EY+ G V L+ L+ +K ++A+ + ++ Y+HR+++
Sbjct: 75 QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRNLRAA 134
Query: 140 NMLLSATGHLKLTDFGSATQVDKN---GRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYT 196
N+L+S T K+ DFG A ++ N R + P+ ++ APE + N+G+ +T
Sbjct: 135 NILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI---KWTAPEAI-----NYGT--FT 184
Query: 197 GSCDLWSIGVVSYELLT-GSTPF 218
D+WS G++ E++T G P+
Sbjct: 185 IKSDVWSFGILLTEIVTHGRIPY 207
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 121/282 (42%), Gaps = 39/282 (13%)
Query: 10 KNVSASDFDIKRFIQQGNFGDIYLVEEK--QSHNTFVMKKVLREKMPNTIERD------I 61
K + AS I+R I G FG++ K V K L+ RD I
Sbjct: 17 KEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASI 76
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQ 121
M + P I++L V + EY+ G T L+ G + + + ++
Sbjct: 77 MGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKN-DGQFTVIQLVGMLRGISA 135
Query: 122 AVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFG---------SATQVDKNGRIKSIVPV 172
++YL +GYVHRD+ N+L+++ K++DFG A + G+I P+
Sbjct: 136 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI----PI 191
Query: 173 GTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPFNYETLDMTYSSIL 231
+ APE + + + +T + D+WS G+V +E+++ G P+ +MT ++
Sbjct: 192 ---RWTAPEAIAFRK-------FTSASDVWSYGIVMWEVVSYGERPY----WEMTNQDVI 237
Query: 232 ACDTEDTVSFPSSIRLSTAMVNFVQSLVQK-LDARLNMDQVL 272
E+ PS + A+ + QK ++R D+++
Sbjct: 238 KA-VEEGYRLPSPMDCPAALYQLMLDCWQKERNSRPKFDEIV 278
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 77/162 (47%), Gaps = 12/162 (7%)
Query: 119 LAQAVQYLHG-LGYVHRDIKPDNMLLSATGHLKLTDFG-SATQVDKNGRIKSIVPVGTPE 176
+ +A+++LH L +HRD+KP N+L++A G +K DFG S VD + + G
Sbjct: 145 IVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDD---VAKDIDAGCKP 201
Query: 177 YVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTE 236
Y APE + E N GY+ D+WS+G+ EL P Y++ + + E
Sbjct: 202 YXAPERIN-PELNQ--KGYSVKSDIWSLGITXIELAILRFP--YDSWGTPFQQLKQVVEE 256
Query: 237 DTVSFPSSIRLSTAMVNFV-QSLVQKLDARLNMDQVLGHPVF 277
+ P+ + S V+F Q L + R ++ HP F
Sbjct: 257 PSPQLPAD-KFSAEFVDFTSQCLKKNSKERPTYPELXQHPFF 297
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 55/110 (50%), Gaps = 8/110 (7%)
Query: 115 YIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQV--DKNGRIKSIVPV 172
Y + +AV +H G VH D+KP N L+ G LKL DFG A Q+ D +K V
Sbjct: 116 YWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKD-SQV 173
Query: 173 GTPEYVAPEVLEWM----EGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
GT Y+ PE ++ M E + D+WS+G + Y + G TPF
Sbjct: 174 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 223
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 100/227 (44%), Gaps = 38/227 (16%)
Query: 12 VSASDFDIKRFIQQGNFGDIY-----LVEEKQSHNTFVMKKV-----LREKMPNTIERDI 61
V+ + R + QG+FG +Y V + + +K V +RE++ E +
Sbjct: 7 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 66
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLL-------ENQP-HGYLSESKAR 113
M + C ++V L IME +T GD + L EN P S SK
Sbjct: 67 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 126
Query: 114 FYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVD------KNGRIK 167
E+A + YL+ +VHRD+ N +++ +K+ DFG + K G K
Sbjct: 127 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGG--K 184
Query: 168 SIVPVGTPEYVAPEVLEWMEGNHGSDG-YTGSCDLWSIGVVSYELLT 213
++PV +++PE L+ DG +T D+WS GVV +E+ T
Sbjct: 185 GLLPV---RWMSPESLK--------DGVFTTYSDVWSFGVVLWEIAT 220
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 93/216 (43%), Gaps = 31/216 (14%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPN-TIERDIMVKSKCPYIVNLF 74
DF I G FG ++ + + T+V+K+V K N ER++ +K ++ +
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRV---KYNNEKAEREVKALAKLDHVNIVH 68
Query: 75 Y-----------------SFQDMNHVYFI-MEYVTGGDFVTLLENQPHGYLSESKARFYI 116
Y S + FI ME+ G +E + L + A
Sbjct: 69 YNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELF 128
Query: 117 YELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPE 176
++ + V Y+H ++RD+KP N+ L T +K+ DFG T + +G K GT
Sbjct: 129 EQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDG--KRXRSKGTLR 186
Query: 177 YVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELL 212
Y++PE + S Y DL+++G++ ELL
Sbjct: 187 YMSPEQIS-------SQDYGKEVDLYALGLILAELL 215
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 68/144 (47%), Gaps = 19/144 (13%)
Query: 86 IMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSA 145
+ E+V DF L + L++ RFY+YE+ +A+ Y H +G +HRD+KP N+L+
Sbjct: 112 VFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVLIDH 166
Query: 146 TGH-LKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSI 204
L+L D+G A V V + + PE+L Y S D+WS+
Sbjct: 167 EHRKLRLIDWGLAEFYHPGQEYN--VRVASRYFKGPELLV------DYQMYDYSLDMWSL 218
Query: 205 GVVSYELLTGSTPF-----NYETL 223
G + ++ PF NY+ L
Sbjct: 219 GCMLASMIFRKEPFFHGHDNYDQL 242
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 31/217 (14%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTI-------ERDIMVKSKCPYIVNLFY 75
+ QG FG++++ + T V K L+ P T+ E +M K + +V L Y
Sbjct: 26 LGQGCFGEVWM--GTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQL-Y 79
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
+ +Y + EY++ G + L+ + YL + ++A + Y+ + YVHRD
Sbjct: 80 AVVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKN---GRIKSIVPVGTPEYVAPEVLEWMEGNHGS 192
++ N+L+ K+ DFG A ++ N R + P+ ++ APE +G
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI---KWTAPEA-----ALYGR 191
Query: 193 DGYTGSCDLWSIGVVSYELLT-GSTPF----NYETLD 224
+T D+WS G++ EL T G P+ N E LD
Sbjct: 192 --FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLD 226
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 82/178 (46%), Gaps = 27/178 (15%)
Query: 46 KKVLRE-------KMPNTIERDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTL 98
K+ LRE K N I +++ PY + VY +++ + +
Sbjct: 98 KRTLRELKILKHFKHDNIIAIKDILRPTVPY--------GEFKSVYVVLDLMESDLHQII 149
Query: 99 LENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSAT 158
+QP L+ R+++Y+L + ++Y+H +HRD+KP N+L++ LK+ DFG A
Sbjct: 150 HSSQP---LTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMAR 206
Query: 159 QVDKNGRIKSIVP---VGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT 213
+ + V T Y APE++ + YT + DLWS+G + E+L
Sbjct: 207 GLCTSPAEHQYFMTEYVATRWYRAPELMLSLH------EYTQAIDLWSVGCIFGEMLA 258
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 55/110 (50%), Gaps = 8/110 (7%)
Query: 115 YIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQV--DKNGRIKSIVPV 172
Y + +AV +H G VH D+KP N L+ G LKL DFG A Q+ D +K V
Sbjct: 112 YWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKD-SQV 169
Query: 173 GTPEYVAPEVLEWM----EGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
GT Y+ PE ++ M E + D+WS+G + Y + G TPF
Sbjct: 170 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 219
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 99/217 (45%), Gaps = 31/217 (14%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTI-------ERDIMVKSKCPYIVNLFY 75
+ QG FG++++ + T V K L+ P T+ E +M K + +V L Y
Sbjct: 26 LGQGCFGEVWM--GTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQL-Y 79
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
+ +Y + EY++ G + L+ + YL + ++A + Y+ + YVHRD
Sbjct: 80 AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKN---GRIKSIVPVGTPEYVAPEVLEWMEGNHGS 192
+ N+L+ K+ DFG A ++ N R + P+ ++ APE +G
Sbjct: 140 LAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI---KWTAPEA-----ALYGR 191
Query: 193 DGYTGSCDLWSIGVVSYELLT-GSTPF----NYETLD 224
+T D+WS G++ EL T G P+ N E LD
Sbjct: 192 --FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLD 226
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 19/144 (13%)
Query: 86 IMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSA 145
+ E+V DF L + L++ RFY+YE+ +A+ Y H +G +HRD+KP N+++
Sbjct: 112 VFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH 166
Query: 146 TGH-LKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSI 204
L+L D+G A V V + + PE+L Y S D+WS+
Sbjct: 167 EHRKLRLIDWGLAEFYHPGQEYN--VRVASRYFKGPELLV------DYQMYDYSLDMWSL 218
Query: 205 GVVSYELLTGSTPF-----NYETL 223
G + ++ PF NY+ L
Sbjct: 219 GCMLASMIFRKEPFFHGHDNYDQL 242
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 55/110 (50%), Gaps = 8/110 (7%)
Query: 115 YIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQV--DKNGRIKSIVPV 172
Y + +AV +H G VH D+KP N L+ G LKL DFG A Q+ D +K V
Sbjct: 132 YWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDXXXVVKD-SQV 189
Query: 173 GTPEYVAPEVLEWM----EGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
GT Y+ PE ++ M E + D+WS+G + Y + G TPF
Sbjct: 190 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 239
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 19/144 (13%)
Query: 86 IMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSA 145
+ E+V DF L + L++ RFY+YE+ +A+ Y H +G +HRD+KP N+++
Sbjct: 112 VFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH 166
Query: 146 TGH-LKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSI 204
L+L D+G A V V + + PE+L Y S D+WS+
Sbjct: 167 EHRKLRLIDWGLAEFYHPGQEYN--VRVASRYFKGPELLV------DYQMYDYSLDMWSL 218
Query: 205 GVVSYELLTGSTPF-----NYETL 223
G + ++ PF NY+ L
Sbjct: 219 GCMLASMIFRKEPFFHGHDNYDQL 242
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 19/144 (13%)
Query: 86 IMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSA 145
+ E+V DF L + L++ RFY+YE+ +A+ Y H +G +HRD+KP N+++
Sbjct: 112 VFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH 166
Query: 146 TGH-LKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSI 204
L+L D+G A V V + + PE+L Y S D+WS+
Sbjct: 167 EHRKLRLIDWGLAEFYHPGQEYN--VRVASRYFKGPELLV------DYQMYDYSLDMWSL 218
Query: 205 GVVSYELLTGSTPF-----NYETL 223
G + ++ PF NY+ L
Sbjct: 219 GCMLASMIFRKEPFFHGHDNYDQL 242
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 105/235 (44%), Gaps = 56/235 (23%)
Query: 23 IQQGNFGDIYLVE------EKQSHNTFVMKKVLREKMPNTIERDI--------MVK--SK 66
+ +G FG + + E +K V K+L++ + E+D+ M+K K
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD---DATEKDLSDLVSEMEMMKMIGK 99
Query: 67 CPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLE-NQPHGY--------LSESKARF--- 114
I+NL + +Y I+EY + G+ L +P G + E + F
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDL 159
Query: 115 --YIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDK--------NG 164
Y+LA+ ++YL +HRD+ N+L++ +K+ DFG A ++ NG
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 165 RIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
R+ PV +++APE L YT D+WS GV+ +E+ T G +P+
Sbjct: 220 RL----PV---KWMAPEAL-------FDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 19/144 (13%)
Query: 86 IMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSA 145
+ E+V DF L + L++ RFY+YE+ +A+ Y H +G +HRD+KP N+++
Sbjct: 111 VFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH 165
Query: 146 TGH-LKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSI 204
L+L D+G A V V + + PE+L Y S D+WS+
Sbjct: 166 EHRKLRLIDWGLAEFYHPGQEYN--VRVASRYFKGPELLV------DYQMYDYSLDMWSL 217
Query: 205 GVVSYELLTGSTPF-----NYETL 223
G + ++ PF NY+ L
Sbjct: 218 GCMLASMIFRKEPFFHGHDNYDQL 241
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 19/144 (13%)
Query: 86 IMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSA 145
+ E+V DF L + L++ RFY+YE+ +A+ Y H +G +HRD+KP N+++
Sbjct: 112 VFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH 166
Query: 146 TGH-LKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSI 204
L+L D+G A V V + + PE+L Y S D+WS+
Sbjct: 167 EHRKLRLIDWGLAEFYHPGQEYN--VRVASRYFKGPELLV------DYQMYDYSLDMWSL 218
Query: 205 GVVSYELLTGSTPF-----NYETL 223
G + ++ PF NY+ L
Sbjct: 219 GCMLASMIFRKEPFFHGHDNYDQL 242
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 70/140 (50%), Gaps = 12/140 (8%)
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
+ + VY +++ + + +QP L+ R+++Y+L + ++Y+H +HRD+
Sbjct: 129 YGEFKSVYVVLDLMESDLHQIIHSSQP---LTLEHVRYFLYQLLRGLKYMHSAQVIHRDL 185
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVP---VGTPEYVAPEVLEWMEGNHGSD 193
KP N+L++ LK+ DFG A + + V T Y APE++ +
Sbjct: 186 KPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLH------ 239
Query: 194 GYTGSCDLWSIGVVSYELLT 213
YT + DLWS+G + E+L
Sbjct: 240 EYTQAIDLWSVGCIFGEMLA 259
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 68/145 (46%), Gaps = 19/145 (13%)
Query: 85 FIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLS 144
+ E+V DF L + L++ RFY+YE+ +A+ Y H +G +HRD+KP N+++
Sbjct: 111 LVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID 165
Query: 145 ATGH-LKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWS 203
L+L D+G A V V + + PE+L Y S D+WS
Sbjct: 166 HEHRKLRLIDWGLAEFYHPGQEYN--VRVASRYFKGPELLV------DYQMYDYSLDMWS 217
Query: 204 IGVVSYELLTGSTPF-----NYETL 223
+G + ++ PF NY+ L
Sbjct: 218 LGCMLASMIFRKEPFFHGHDNYDQL 242
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 19/144 (13%)
Query: 86 IMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSA 145
+ E+V DF L + L++ RFY+YE+ +A+ Y H +G +HRD+KP N+++
Sbjct: 112 VFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH 166
Query: 146 TGH-LKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSI 204
L+L D+G A V V + + PE+L Y S D+WS+
Sbjct: 167 EHRKLRLIDWGLAEFYHPGQEYN--VRVASRYFKGPELLV------DYQMYDYSLDMWSL 218
Query: 205 GVVSYELLTGSTPF-----NYETL 223
G + ++ PF NY+ L
Sbjct: 219 GCMLASMIFRKEPFFHGHDNYDQL 242
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 19/144 (13%)
Query: 86 IMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSA 145
+ E+V DF L + L++ RFY+YE+ +A+ Y H +G +HRD+KP N+++
Sbjct: 112 VFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH 166
Query: 146 TGH-LKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSI 204
L+L D+G A V V + + PE+L Y S D+WS+
Sbjct: 167 EHRKLRLIDWGLAEFYHPGQEYN--VRVASRYFKGPELLV------DYQMYDYSLDMWSL 218
Query: 205 GVVSYELLTGSTPF-----NYETL 223
G + ++ PF NY+ L
Sbjct: 219 GCMLASMIFRKEPFFHGHDNYDQL 242
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 19/144 (13%)
Query: 86 IMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSA 145
+ E+V DF L + L++ RFY+YE+ +A+ Y H +G +HRD+KP N+++
Sbjct: 111 VFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH 165
Query: 146 TGH-LKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSI 204
L+L D+G A V V + + PE+L Y S D+WS+
Sbjct: 166 EHRKLRLIDWGLAEFYHPGQEYN--VRVASRYFKGPELLV------DYQMYDYSLDMWSL 217
Query: 205 GVVSYELLTGSTPF-----NYETL 223
G + ++ PF NY+ L
Sbjct: 218 GCMLASMIFRKEPFFHGHDNYDQL 241
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 19/144 (13%)
Query: 86 IMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSA 145
+ E+V DF L + L++ RFY+YE+ +A+ Y H +G +HRD+KP N+++
Sbjct: 110 VFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH 164
Query: 146 TGH-LKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSI 204
L+L D+G A V V + + PE+L Y S D+WS+
Sbjct: 165 EHRKLRLIDWGLAEFYHPGQEYN--VRVASRYFKGPELLV------DYQMYDYSLDMWSL 216
Query: 205 GVVSYELLTGSTPF-----NYETL 223
G + ++ PF NY+ L
Sbjct: 217 GCMLASMIFRKEPFFHGHDNYDQL 240
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 105/235 (44%), Gaps = 56/235 (23%)
Query: 23 IQQGNFGDIYLVE------EKQSHNTFVMKKVLREKMPNTIERDI--------MVK--SK 66
+ +G FG + + E +K V K+L++ + E+D+ M+K K
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD---DATEKDLSDLVSEMEMMKMIGK 145
Query: 67 CPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLE-NQPHGY--------LSESKARF--- 114
I+NL + +Y I+EY + G+ L +P G + E + F
Sbjct: 146 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 205
Query: 115 --YIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDK--------NG 164
Y+LA+ ++YL +HRD+ N+L++ +K+ DFG A ++ NG
Sbjct: 206 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 265
Query: 165 RIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
R+ PV +++APE L YT D+WS GV+ +E+ T G +P+
Sbjct: 266 RL----PV---KWMAPEAL-------FDRVYTHQSDVWSFGVLMWEIFTLGGSPY 306
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 55/111 (49%), Gaps = 10/111 (9%)
Query: 115 YIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVP--- 171
Y + +AV +H G VH D+KP N L+ G LKL DFG A Q+ + S+V
Sbjct: 160 YWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPD--TTSVVKDSQ 216
Query: 172 VGTPEYVAPEVLEWM----EGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
VG Y+ PE ++ M E + D+WS+G + Y + G TPF
Sbjct: 217 VGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 267
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 19/144 (13%)
Query: 86 IMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSA 145
+ E+V DF L + L++ RFY+YE+ +A+ Y H +G +HRD+KP N+++
Sbjct: 112 VFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH 166
Query: 146 TGH-LKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSI 204
L+L D+G A V V + + PE+L Y S D+WS+
Sbjct: 167 EHRKLRLIDWGLAEFYHPGQEYN--VRVASRYFKGPELLV------DYQMYDYSLDMWSL 218
Query: 205 GVVSYELLTGSTPF-----NYETL 223
G + ++ PF NY+ L
Sbjct: 219 GCMLASMIFRKEPFFHGHDNYDQL 242
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 98/211 (46%), Gaps = 30/211 (14%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPN-----TIERDIMVKSKCPYI-VNLFYS 76
I G+FG +Y K + V K+L P + ++ V K ++ + LF
Sbjct: 20 IGSGSFGTVY----KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 75
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYEL-------AQAVQYLHGL 129
+ + + ++ G + +L S+ +F + +L A+ + YLH
Sbjct: 76 YSTKPQLAIVTQWCEGSSL--------YHHLHASETKFEMKKLIDIARQTARGMDYLHAK 127
Query: 130 GYVHRDIKPDNMLLSATGHLKLTDFGSATQVDK-NGRIKSIVPVGTPEYVAPEVLEWMEG 188
+HRD+K +N+ L +K+ DFG AT + +G + G+ ++APEV+ +
Sbjct: 128 SIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD- 186
Query: 189 NHGSDGYTGSCDLWSIGVVSYELLTGSTPFN 219
S+ Y+ D+++ G+V YEL+TG P++
Sbjct: 187 ---SNPYSFQSDVYAFGIVLYELMTGQLPYS 214
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 105/235 (44%), Gaps = 56/235 (23%)
Query: 23 IQQGNFGDIYLVE------EKQSHNTFVMKKVLREKMPNTIERDI--------MVK--SK 66
+ +G FG + + E +K V K+L++ + E+D+ M+K K
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD---DATEKDLSDLVSEMEMMKMIGK 99
Query: 67 CPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLE-NQPHGY--------LSESKARF--- 114
I+NL + +Y I+EY + G+ L +P G + E + F
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 115 --YIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDK--------NG 164
Y+LA+ ++YL +HRD+ N+L++ +K+ DFG A ++ NG
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 165 RIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
R+ PV +++APE L YT D+WS GV+ +E+ T G +P+
Sbjct: 220 RL----PV---KWMAPEAL-------FDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 100/227 (44%), Gaps = 38/227 (16%)
Query: 12 VSASDFDIKRFIQQGNFGDIY-----LVEEKQSHNTFVMKKV-----LREKMPNTIERDI 61
V+ + R + QG+FG +Y V + + +K V +RE++ E +
Sbjct: 16 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 75
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLL-------ENQP-HGYLSESKAR 113
M + C ++V L IME +T GD + L EN P S SK
Sbjct: 76 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 135
Query: 114 FYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVD------KNGRIK 167
E+A + YL+ +VHRD+ N +++ +K+ DFG + K G K
Sbjct: 136 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGG--K 193
Query: 168 SIVPVGTPEYVAPEVLEWMEGNHGSDG-YTGSCDLWSIGVVSYELLT 213
++PV +++PE L+ DG +T D+WS GVV +E+ T
Sbjct: 194 GLLPV---RWMSPESLK--------DGVFTTYSDVWSFGVVLWEIAT 229
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 99/217 (45%), Gaps = 31/217 (14%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTI-------ERDIMVKSKCPYIVNLFY 75
+ QG FG++++ + T V K L+ P T+ E +M K + +V L Y
Sbjct: 16 LGQGCFGEVWM--GTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQL-Y 69
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
+ + + EY++ G + L+ + YL + ++A + Y+ + YVHRD
Sbjct: 70 AVVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 129
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKN---GRIKSIVPVGTPEYVAPEVLEWMEGNHGS 192
++ N+L+ K+ DFG A ++ N R + P+ ++ APE +G
Sbjct: 130 LRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPI---KWTAPEA-----ALYGR 181
Query: 193 DGYTGSCDLWSIGVVSYELLT-GSTPF----NYETLD 224
+T D+WS G++ EL T G P+ N E LD
Sbjct: 182 --FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLD 216
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 19/144 (13%)
Query: 86 IMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSA 145
+ E+V DF L + L++ RFY+YE+ +A+ Y H +G +HRD+KP N+++
Sbjct: 112 VFEHVNNTDFKQLRQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH 166
Query: 146 TGH-LKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSI 204
L+L D+G A V V + + PE+L Y S D+WS+
Sbjct: 167 EHRKLRLIDWGLAEFYHPGQEYN--VRVASRYFKGPELLV------DYQMYDYSLDMWSL 218
Query: 205 GVVSYELLTGSTPF-----NYETL 223
G + ++ PF NY+ L
Sbjct: 219 GCMLASMIFRKEPFFHGHDNYDQL 242
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 75/145 (51%), Gaps = 24/145 (16%)
Query: 83 VYFIMEYVTGGDFVTLLEN-----QPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIK 137
+Y I E++ G + L++ QP L + A ++A+ + ++ Y+HRD++
Sbjct: 84 IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSA-----QIAEGMAFIEQRNYIHRDLR 138
Query: 138 PDNMLLSATGHLKLTDFGSATQVDKN---GRIKSIVPVGTPEYVAPEVLEWMEGNHGSDG 194
N+L+SA+ K+ DFG A ++ N R + P+ ++ APE + N GS
Sbjct: 139 AANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPI---KWTAPEAI-----NFGS-- 188
Query: 195 YTGSCDLWSIGVVSYELLT-GSTPF 218
+T D+WS G++ E++T G P+
Sbjct: 189 FTIKSDVWSFGILLMEIVTYGRIPY 213
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 120/283 (42%), Gaps = 39/283 (13%)
Query: 10 KNVSASDFDIKRFIQQGNFGDIYLVEEK--QSHNTFVMKKVLREKMPNTIERD------I 61
K + AS I+R I G FG++ K + V K L+ RD I
Sbjct: 38 KELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASI 97
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQ 121
M + P +V+L V ++E++ G L G + + + +A
Sbjct: 98 MGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKH-DGQFTVIQLVGMLRGIAA 156
Query: 122 AVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFG---------SATQVDKNGRIKSIVPV 172
++YL +GYVHRD+ N+L+++ K++DFG A G+I PV
Sbjct: 157 GMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKI----PV 212
Query: 173 GTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPFNYETLDMTYSSIL 231
+ APE +++ + +T + D+WS G+V +E+++ G P+ DM+ ++
Sbjct: 213 ---RWTAPEAIQYRK-------FTSASDVWSYGIVMWEVMSYGERPY----WDMSNQDVI 258
Query: 232 ACDTEDTVSFPSSIRLSTAMVNFVQSLVQKLDA-RLNMDQVLG 273
E+ P+ + + + QK A R +Q++G
Sbjct: 259 KA-IEEGYRLPAPMDCPAGLHQLMLDCWQKERAERPKFEQIVG 300
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 19/144 (13%)
Query: 86 IMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSA 145
+ E+V DF L + L++ RFY+YE+ +A+ Y H +G +HRD+KP N+++
Sbjct: 117 VFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH 171
Query: 146 TGH-LKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSI 204
L+L D+G A V V + + PE+L Y S D+WS+
Sbjct: 172 EHRKLRLIDWGLAEFYHPGQEYN--VRVASRYFKGPELLV------DYQMYDYSLDMWSL 223
Query: 205 GVVSYELLTGSTPF-----NYETL 223
G + ++ PF NY+ L
Sbjct: 224 GCMLASMIFRKEPFFHGHDNYDQL 247
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 93/205 (45%), Gaps = 26/205 (12%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFV-------MKKVLREKMPNTIERDIMVKSKCPY--IVNL 73
+ +G FG +Y + +NT V M + E++ +++I V +KC + +V L
Sbjct: 39 MGEGGFGVVY---KGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 95
Query: 74 FYSFQDMNHVYFIMEYVTGG---DFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLG 130
D + + + Y+ G D ++ L+ P LS A + +LH
Sbjct: 96 LGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP--LSWHMRCKIAQGAANGINFLHENH 153
Query: 131 YVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGR-IKSIVPVGTPEYVAPEVLEWMEGN 189
++HRDIK N+LL K++DFG A +K + + VGT Y+APE L
Sbjct: 154 HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALRGE--- 210
Query: 190 HGSDGYTGSCDLWSIGVVSYELLTG 214
T D++S GVV E++TG
Sbjct: 211 -----ITPKSDIYSFGVVLLEIITG 230
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 96/218 (44%), Gaps = 41/218 (18%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVL----REKMPNTIERDIMVKSKCPY--IVNLF-- 74
I QG FG+++ +++ +KKVL +E P T R+I + + +VNL
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 75 -------YSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYL- 126
Y+ + +Y + ++ E+ G LS +F + E+ + +Q L
Sbjct: 86 CRTKASPYN-RCKGSIYLVFDFC---------EHDLAGLLSNVLVKFTLSEIKRVMQMLL 135
Query: 127 HGLGYVHR------DIKPDNMLLSATGHLKLTDFG--SATQVDKNGRIKSIVP-VGTPEY 177
+GL Y+HR D+K N+L++ G LKL DFG A + KN + V T Y
Sbjct: 136 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 178 VAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGS 215
PE+L G Y DLW G + E+ T S
Sbjct: 196 RPPELL------LGERDYGPPIDLWGAGCIMAEMWTRS 227
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 95/217 (43%), Gaps = 27/217 (12%)
Query: 14 ASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLR--EKMPNTIERDIMVKSKC---P 68
SD + +G FG V +++ VMK+++R E+ T +++ V +C P
Sbjct: 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKV-MRCLEHP 67
Query: 69 YIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHG 128
++ + FI EY+ GG ++++ Y + F ++A + YLH
Sbjct: 68 NVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSF-AKDIASGMAYLHS 126
Query: 129 LGYVHRDIKPDNMLLSATGHLKLTDFGSA-------TQ------VDKNGRIKSIVPVGTP 175
+ +HRD+ N L+ ++ + DFG A TQ + K R K VG P
Sbjct: 127 MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNP 186
Query: 176 EYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELL 212
++APE++ Y D++S G+V E++
Sbjct: 187 YWMAPEMIN-------GRSYDEKVDVFSFGIVLCEII 216
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 117/260 (45%), Gaps = 40/260 (15%)
Query: 19 IKRFIQQGNFGDIYLVEEKQSHNTFVMKKVL---REKMPNTIERDIMVK--SKCPYIVNL 73
++R + +G F +Y ++ S + +K++L EK I+ +K S P IV
Sbjct: 32 VRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQ- 90
Query: 74 FYSFQDMNHV--------YFIMEYVTGGDFVTLLEN-QPHGYLSESKARFYIYELAQAVQ 124
F S + + ++ + G V L+ + G LS Y+ +AVQ
Sbjct: 91 FCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQ 150
Query: 125 YLH--GLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDK------NGRIKSIVP----- 171
++H +HRD+K +N+LLS G +KL DFGSAT + + + +++V
Sbjct: 151 HMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITR 210
Query: 172 VGTPEYVAPEVLEWMEGNHGSDGYTG-SCDLWSIGVVSYELLTGSTPF----NYETLDMT 226
TP Y PE+++ S+ G D+W++G + Y L PF ++
Sbjct: 211 NTTPMYRTPEIIDLY-----SNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVNGK 265
Query: 227 YSSILACDTEDTVSFPSSIR 246
Y SI DT+ TV F S IR
Sbjct: 266 Y-SIPPHDTQYTV-FHSLIR 283
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 100/227 (44%), Gaps = 38/227 (16%)
Query: 12 VSASDFDIKRFIQQGNFGDIY-----LVEEKQSHNTFVMKKV-----LREKMPNTIERDI 61
V+ + R + QG+FG +Y V + + +K V +RE++ E +
Sbjct: 9 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 68
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLL-------ENQP-HGYLSESKAR 113
M + C ++V L IME +T GD + L EN P S SK
Sbjct: 69 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 128
Query: 114 FYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQV------DKNGRIK 167
E+A + YL+ +VHRD+ N +++ +K+ DFG + K G K
Sbjct: 129 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG--K 186
Query: 168 SIVPVGTPEYVAPEVLEWMEGNHGSDG-YTGSCDLWSIGVVSYELLT 213
++PV +++PE L+ DG +T D+WS GVV +E+ T
Sbjct: 187 GLLPV---RWMSPESLK--------DGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 105/235 (44%), Gaps = 56/235 (23%)
Query: 23 IQQGNFGDIYLVE------EKQSHNTFVMKKVLREKMPNTIERDI--------MVK--SK 66
+ +G FG + + E +K V K+L++ + E+D+ M+K K
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD---DATEKDLSDLVSEMEMMKMIGK 88
Query: 67 CPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLE-NQPHGY--------LSESKARF--- 114
I+NL + +Y I+EY + G+ L +P G + E + F
Sbjct: 89 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 148
Query: 115 --YIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDK--------NG 164
Y+LA+ ++YL +HRD+ N+L++ +K+ DFG A ++ NG
Sbjct: 149 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 208
Query: 165 RIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
R+ PV +++APE L YT D+WS GV+ +E+ T G +P+
Sbjct: 209 RL----PV---KWMAPEALF-------DRVYTHQSDVWSFGVLMWEIFTLGGSPY 249
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 100/227 (44%), Gaps = 38/227 (16%)
Query: 12 VSASDFDIKRFIQQGNFGDIY-----LVEEKQSHNTFVMKKV-----LREKMPNTIERDI 61
V+ + R + QG+FG +Y V + + +K V +RE++ E +
Sbjct: 13 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 72
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLL-------ENQP-HGYLSESKAR 113
M + C ++V L IME +T GD + L EN P S SK
Sbjct: 73 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 132
Query: 114 FYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQV------DKNGRIK 167
E+A + YL+ +VHRD+ N +++ +K+ DFG + K G K
Sbjct: 133 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG--K 190
Query: 168 SIVPVGTPEYVAPEVLEWMEGNHGSDG-YTGSCDLWSIGVVSYELLT 213
++PV +++PE L+ DG +T D+WS GVV +E+ T
Sbjct: 191 GLLPV---RWMSPESLK--------DGVFTTYSDVWSFGVVLWEIAT 226
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 105/235 (44%), Gaps = 56/235 (23%)
Query: 23 IQQGNFGDIYLVE------EKQSHNTFVMKKVLREKMPNTIERDI--------MVK--SK 66
+ +G FG + + E +K V K+L++ + E+D+ M+K K
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD---DATEKDLSDLVSEMEMMKMIGK 99
Query: 67 CPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLE-NQPHGY--------LSESKARF--- 114
I+NL + +Y I+EY + G+ L +P G + E + F
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 115 --YIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDK--------NG 164
Y+LA+ ++YL +HRD+ N+L++ +K+ DFG A ++ NG
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNG 219
Query: 165 RIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
R+ PV +++APE L YT D+WS GV+ +E+ T G +P+
Sbjct: 220 RL----PV---KWMAPEAL-------FDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 67/145 (46%), Gaps = 19/145 (13%)
Query: 85 FIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLL- 143
+ EY+ DF L + L++ RFY+YEL +A+ Y H G +HRD+KP N+++
Sbjct: 112 LVFEYINNTDFKQLYQ-----ILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMID 166
Query: 144 SATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWS 203
L+L D+G A V V + + PE+L Y S D+WS
Sbjct: 167 HQQKKLRLIDWGLAEFYHPAQEYN--VRVASRYFKGPELLV------DYQMYDYSLDMWS 218
Query: 204 IGVVSYELLTGSTPF-----NYETL 223
+G + ++ PF NY+ L
Sbjct: 219 LGCMLASMIFRREPFFHGQDNYDQL 243
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 105/235 (44%), Gaps = 56/235 (23%)
Query: 23 IQQGNFGDIYLVE------EKQSHNTFVMKKVLREKMPNTIERDI--------MVK--SK 66
+ +G FG + + E +K V K+L++ + E+D+ M+K K
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD---DATEKDLSDLVSEMEMMKMIGK 86
Query: 67 CPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLE-NQPHGY--------LSESKARF--- 114
I+NL + +Y I+EY + G+ L +P G + E + F
Sbjct: 87 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 146
Query: 115 --YIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDK--------NG 164
Y+LA+ ++YL +HRD+ N+L++ +K+ DFG A ++ NG
Sbjct: 147 VSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 206
Query: 165 RIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
R+ PV +++APE L YT D+WS GV+ +E+ T G +P+
Sbjct: 207 RL----PV---KWMAPEAL-------FDRVYTHQSDVWSFGVLMWEIFTLGGSPY 247
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 96/218 (44%), Gaps = 41/218 (18%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVL----REKMPNTIERDIMVKSKCPY--IVNLF-- 74
I QG FG+++ +++ +KKVL +E P T R+I + + +VNL
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 75 -------YSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYL- 126
Y+ + +Y + ++ E+ G LS +F + E+ + +Q L
Sbjct: 85 CRTKASPYN-RCKGSIYLVFDFC---------EHDLAGLLSNVLVKFTLSEIKRVMQMLL 134
Query: 127 HGLGYVHR------DIKPDNMLLSATGHLKLTDFG--SATQVDKNGRIKSIVP-VGTPEY 177
+GL Y+HR D+K N+L++ G LKL DFG A + KN + V T Y
Sbjct: 135 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 194
Query: 178 VAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGS 215
PE+L G Y DLW G + E+ T S
Sbjct: 195 RPPELLL------GERDYGPPIDLWGAGCIMAEMWTRS 226
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 93/205 (45%), Gaps = 26/205 (12%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFV-------MKKVLREKMPNTIERDIMVKSKCPY--IVNL 73
+ +G FG +Y + +NT V M + E++ +++I V +KC + +V L
Sbjct: 39 MGEGGFGVVY---KGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 95
Query: 74 FYSFQDMNHVYFIMEYVTGG---DFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLG 130
D + + + Y+ G D ++ L+ P LS A + +LH
Sbjct: 96 LGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP--LSWHMRCKIAQGAANGINFLHENH 153
Query: 131 YVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGR-IKSIVPVGTPEYVAPEVLEWMEGN 189
++HRDIK N+LL K++DFG A +K + + VGT Y+APE L
Sbjct: 154 HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALRGE--- 210
Query: 190 HGSDGYTGSCDLWSIGVVSYELLTG 214
T D++S GVV E++TG
Sbjct: 211 -----ITPKSDIYSFGVVLLEIITG 230
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 93/205 (45%), Gaps = 26/205 (12%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFV-------MKKVLREKMPNTIERDIMVKSKCPY--IVNL 73
+ +G FG +Y + +NT V M + E++ +++I V +KC + +V L
Sbjct: 33 MGEGGFGVVY---KGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 89
Query: 74 FYSFQDMNHVYFIMEYVTGG---DFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLG 130
D + + + Y+ G D ++ L+ P LS A + +LH
Sbjct: 90 LGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP--LSWHMRCKIAQGAANGINFLHENH 147
Query: 131 YVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGR-IKSIVPVGTPEYVAPEVLEWMEGN 189
++HRDIK N+LL K++DFG A +K + + VGT Y+APE L
Sbjct: 148 HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALRGE--- 204
Query: 190 HGSDGYTGSCDLWSIGVVSYELLTG 214
T D++S GVV E++TG
Sbjct: 205 -----ITPKSDIYSFGVVLLEIITG 224
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 105/235 (44%), Gaps = 56/235 (23%)
Query: 23 IQQGNFGDIYLVE------EKQSHNTFVMKKVLREKMPNTIERDI--------MVK--SK 66
+ +G FG + + E +K V K+L++ + E+D+ M+K K
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD---DATEKDLSDLVSEMEMMKMIGK 91
Query: 67 CPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLE-NQPHGY--------LSESKARF--- 114
I+NL + +Y I+EY + G+ L +P G + E + F
Sbjct: 92 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 151
Query: 115 --YIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDK--------NG 164
Y+LA+ ++YL +HRD+ N+L++ +K+ DFG A ++ NG
Sbjct: 152 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 211
Query: 165 RIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
R+ PV +++APE L YT D+WS GV+ +E+ T G +P+
Sbjct: 212 RL----PV---KWMAPEALF-------DRVYTHQSDVWSFGVLMWEIFTLGGSPY 252
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 100/227 (44%), Gaps = 38/227 (16%)
Query: 12 VSASDFDIKRFIQQGNFGDIY-----LVEEKQSHNTFVMKKV-----LREKMPNTIERDI 61
V+ + R + QG+FG +Y V + + +K V +RE++ E +
Sbjct: 15 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 74
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLL-------ENQP-HGYLSESKAR 113
M + C ++V L IME +T GD + L EN P S SK
Sbjct: 75 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 134
Query: 114 FYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQV------DKNGRIK 167
E+A + YL+ +VHRD+ N +++ +K+ DFG + K G K
Sbjct: 135 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG--K 192
Query: 168 SIVPVGTPEYVAPEVLEWMEGNHGSDG-YTGSCDLWSIGVVSYELLT 213
++PV +++PE L+ DG +T D+WS GVV +E+ T
Sbjct: 193 GLLPV---RWMSPESLK--------DGVFTTYSDVWSFGVVLWEIAT 228
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 95/227 (41%), Gaps = 38/227 (16%)
Query: 12 VSASDFDIKRFIQQGNFGDIY-----LVEEKQSHNTFVMKKV-----LREKMPNTIERDI 61
V+ + R + QG+FG +Y V + + +K V +RE++ E +
Sbjct: 22 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 81
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLL-------ENQP-HGYLSESKAR 113
M + C ++V L IME +T GD + L EN P S SK
Sbjct: 82 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 141
Query: 114 FYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQV------DKNGRIK 167
E+A + YL+ +VHRD+ N +++ +K+ DFG + K G K
Sbjct: 142 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG--K 199
Query: 168 SIVPVGTPEYVAPEVLEWMEGNHGSDG-YTGSCDLWSIGVVSYELLT 213
++PV WM DG +T D+WS GVV +E+ T
Sbjct: 200 GLLPV-----------RWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 58/101 (57%), Gaps = 5/101 (4%)
Query: 120 AQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDK-NGRIKSIVPVGTPEYV 178
AQ + YLH +HRD+K +N+ L +K+ DFG AT+ + +G + G+ ++
Sbjct: 134 AQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 193
Query: 179 APEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFN 219
APEV+ + N Y+ D+++ G+V YEL+TG P++
Sbjct: 194 APEVIRMQDKN----PYSFQSDVYAFGIVLYELMTGQLPYS 230
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 96/218 (44%), Gaps = 41/218 (18%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVL----REKMPNTIERDIMVKSKCPY--IVNLF-- 74
I QG FG+++ +++ +KKVL +E P T R+I + + +VNL
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 75 -------YSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYL- 126
Y+ + +Y + ++ E+ G LS +F + E+ + +Q L
Sbjct: 86 CRTKASPYN-RCKGSIYLVFDFC---------EHDLAGLLSNVLVKFTLSEIKRVMQMLL 135
Query: 127 HGLGYVHR------DIKPDNMLLSATGHLKLTDFG--SATQVDKNGRIKSIVP-VGTPEY 177
+GL Y+HR D+K N+L++ G LKL DFG A + KN + V T Y
Sbjct: 136 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 178 VAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGS 215
PE+L G Y DLW G + E+ T S
Sbjct: 196 RPPELL------LGERDYGPPIDLWGAGCIMAEMWTRS 227
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 74/149 (49%), Gaps = 14/149 (9%)
Query: 74 FYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVH 133
Y+ +Y I EY+ G V L+ L+ +K ++A+ + ++ Y+H
Sbjct: 73 LYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH 132
Query: 134 RDIKPDNMLLSATGHLKLTDFGSATQV---DKNGRIKSIVPVGTPEYVAPEVLEWMEGNH 190
RD++ N+L+S T K+ DFG A + + R + P+ ++ APE + N+
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPI---KWTAPEAI-----NY 184
Query: 191 GSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
G+ +T D+WS G++ E++T G P+
Sbjct: 185 GT--FTIKSDVWSFGILLTEIVTHGRIPY 211
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 86/182 (47%), Gaps = 20/182 (10%)
Query: 68 PYIVNLFYSFQDMN-HVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYL 126
P++V + + F +++ +Y + G D L Q G L+ +A + ++ A+
Sbjct: 94 PHVVPI-HDFGEIDGQLYVDXRLINGVDLAAXLRRQ--GPLAPPRAVAIVRQIGSALDAA 150
Query: 127 HGLGYVHRDIKPDNMLLSATGHLKLTDFG--SATQVDKNGRIKSIVPVGTPEYVAPEVLE 184
H G HRD+KP+N+L+SA L DFG SAT +K ++ + VGT Y APE
Sbjct: 151 HAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNT--VGTLYYXAPERFS 208
Query: 185 WMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSS 244
+ +D Y +C V YE LTGS P+ + L S+ + PS+
Sbjct: 209 ESHATYRADIYALTC-------VLYECLTGSPPYQGDQL-----SVXGAHINQAIPRPST 256
Query: 245 IR 246
+R
Sbjct: 257 VR 258
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 103/235 (43%), Gaps = 56/235 (23%)
Query: 23 IQQGNFGDIYLVE------EKQSHNTFVMKKVLREKMPNTIERDI--------MVK--SK 66
+ +G FG + L E +K + T V K+L+ + E+D+ M+K K
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKS---DATEKDLSDLISEMEMMKMIGK 92
Query: 67 CPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLE--------------NQPHGYLSESKA 112
I+NL + +Y I+EY + G+ L+ + P LS
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDL 152
Query: 113 RFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDK--------NG 164
Y++A+ ++YL +HRD+ N+L++ +K+ DFG A + NG
Sbjct: 153 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNG 212
Query: 165 RIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
R+ PV +++APE L YT D+WS GV+ +E+ T G +P+
Sbjct: 213 RL----PV---KWMAPEALF-------DRIYTHQSDVWSFGVLLWEIFTLGGSPY 253
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 58/101 (57%), Gaps = 5/101 (4%)
Query: 120 AQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDK-NGRIKSIVPVGTPEYV 178
AQ + YLH +HRD+K +N+ L +K+ DFG AT+ + +G + G+ ++
Sbjct: 142 AQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 201
Query: 179 APEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFN 219
APEV+ + N Y+ D+++ G+V YEL+TG P++
Sbjct: 202 APEVIRMQDKNP----YSFQSDVYAFGIVLYELMTGQLPYS 238
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 108/268 (40%), Gaps = 32/268 (11%)
Query: 68 PYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLH 127
P IV +F N ++ + ++ G L+ ++E + + + +A+ Y+H
Sbjct: 70 PNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIH 129
Query: 128 GLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIV------PVGTPEYVAPE 181
+GYVHR +K ++L+S G + L+ S + +G+ + +V V +++PE
Sbjct: 130 HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPE 189
Query: 182 VLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFN--------YETLDMTYSSILAC 233
VL+ GY D++S+G+ + EL G PF E L+ T +L
Sbjct: 190 VLQ-----QNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDT 244
Query: 234 DTEDTVSFPSSIRLSTAMVNFVQSLVQKLDARLNMDQV-----------LGHPVFDCLDS 282
T S S A SL N D H V CL
Sbjct: 245 STIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQR 304
Query: 283 DPPCIPPPSQ--ENKFHKKDKRKASPSL 308
+P P S + F K+ KR+AS +L
Sbjct: 305 NPDARPSASTLLNHSFFKQIKRRASEAL 332
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 37/172 (21%)
Query: 70 IVNLFYSFQDMNHVYFIMEYVTGGDFVTLLE-NQPHGY--------LSESKARF-----Y 115
I+NL + +Y I+EY + G+ L +P G + E + F
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 116 IYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDK--------NGRIK 167
Y+LA+ ++YL +HRD+ N+L++ +K+ DFG A ++ NGR+
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL- 221
Query: 168 SIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
PV +++APE L YT D+WS GV+ +E+ T G +P+
Sbjct: 222 ---PV---KWMAPEAL-------FDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 100/234 (42%), Gaps = 47/234 (20%)
Query: 10 KNVSASDFDIKRFIQQGNFGDIY--LVEEKQSHNTFVMKKVLREKMPNTIERD------I 61
K + AS I++ I G FG++ ++ V K L+ + RD I
Sbjct: 9 KEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASI 68
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYEL-- 119
M + P I++L V I EY+ G +L ++ RF + +L
Sbjct: 69 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSL--------DAFLRKNDGRFTVIQLVG 120
Query: 120 -----AQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFG---------SATQVDKNGR 165
++YL + YVHRD+ N+L+++ K++DFG A + G+
Sbjct: 121 MLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGK 180
Query: 166 IKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
I P+ + APE + + + +T + D+WS G+V +E+++ G P+
Sbjct: 181 I----PI---RWTAPEAIAYRK-------FTSASDVWSYGIVMWEVMSYGERPY 220
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 100/227 (44%), Gaps = 38/227 (16%)
Query: 12 VSASDFDIKRFIQQGNFGDIY-----LVEEKQSHNTFVMKKV-----LREKMPNTIERDI 61
V+ + R + QG+FG +Y V + + +K V +RE++ E +
Sbjct: 15 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 74
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLL-------ENQP-HGYLSESKAR 113
M + C ++V L IME +T GD + L EN P S SK
Sbjct: 75 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 134
Query: 114 FYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQV------DKNGRIK 167
E+A + YL+ +VHRD+ N +++ +K+ DFG + K G K
Sbjct: 135 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG--K 192
Query: 168 SIVPVGTPEYVAPEVLEWMEGNHGSDG-YTGSCDLWSIGVVSYELLT 213
++PV +++PE L+ DG +T D+WS GVV +E+ T
Sbjct: 193 GLLPV---RWMSPESLK--------DGVFTTYSDVWSFGVVLWEIAT 228
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 98/225 (43%), Gaps = 38/225 (16%)
Query: 12 VSASDFDIKRFIQQGNFGDIYL-----VEEKQSHNTFVMKKV-----LREKMPNTIERDI 61
VS + R + QG+FG +Y + + ++ +K V LRE++ E +
Sbjct: 11 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASV 70
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLL-------ENQPHGYLSESKARF 114
M C ++V L +ME + GD + L EN P +
Sbjct: 71 MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI 130
Query: 115 YIY-ELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVD------KNGRIK 167
+ E+A + YL+ +VHRD+ N +++ +K+ DFG + K G K
Sbjct: 131 QMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGG--K 188
Query: 168 SIVPVGTPEYVAPEVLEWMEGNHGSDG-YTGSCDLWSIGVVSYEL 211
++PV ++APE L+ DG +T S D+WS GVV +E+
Sbjct: 189 GLLPV---RWMAPESLK--------DGVFTTSSDMWSFGVVLWEI 222
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 100/227 (44%), Gaps = 38/227 (16%)
Query: 12 VSASDFDIKRFIQQGNFGDIY-----LVEEKQSHNTFVMKKV-----LREKMPNTIERDI 61
V+ + R + QG+FG +Y V + + +K V +RE++ E +
Sbjct: 16 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 75
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLL-------ENQP-HGYLSESKAR 113
M + C ++V L IME +T GD + L EN P S SK
Sbjct: 76 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 135
Query: 114 FYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQV------DKNGRIK 167
E+A + YL+ +VHRD+ N +++ +K+ DFG + K G K
Sbjct: 136 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG--K 193
Query: 168 SIVPVGTPEYVAPEVLEWMEGNHGSDG-YTGSCDLWSIGVVSYELLT 213
++PV +++PE L+ DG +T D+WS GVV +E+ T
Sbjct: 194 GLLPV---RWMSPESLK--------DGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 108/268 (40%), Gaps = 32/268 (11%)
Query: 68 PYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLH 127
P IV +F N ++ + ++ G L+ ++E + + + +A+ Y+H
Sbjct: 86 PNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIH 145
Query: 128 GLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIV------PVGTPEYVAPE 181
+GYVHR +K ++L+S G + L+ S + +G+ + +V V +++PE
Sbjct: 146 HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPE 205
Query: 182 VLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFN--------YETLDMTYSSILAC 233
VL+ GY D++S+G+ + EL G PF E L+ T +L
Sbjct: 206 VLQ-----QNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDT 260
Query: 234 DTEDTVSFPSSIRLSTAMVNFVQSLVQKLDARLNMDQV-----------LGHPVFDCLDS 282
T S S A SL N D H V CL
Sbjct: 261 STIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQR 320
Query: 283 DPPCIPPPSQ--ENKFHKKDKRKASPSL 308
+P P S + F K+ KR+AS +L
Sbjct: 321 NPDARPSASTLLNHSFFKQIKRRASEAL 348
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 103/235 (43%), Gaps = 56/235 (23%)
Query: 23 IQQGNFGDIYLVE------EKQSHNTFVMKKVLREKMPNTIERDI--------MVK--SK 66
+ +G FG + L E +K + T V K+L+ + E+D+ M+K K
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKS---DATEKDLSDLISEMEMMKMIGK 77
Query: 67 CPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLE--------------NQPHGYLSESKA 112
I+NL + +Y I+EY + G+ L+ + P LS
Sbjct: 78 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 137
Query: 113 RFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDK--------NG 164
Y++A+ ++YL +HRD+ N+L++ +K+ DFG A + NG
Sbjct: 138 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 197
Query: 165 RIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
R+ PV +++APE L YT D+WS GV+ +E+ T G +P+
Sbjct: 198 RL----PV---KWMAPEAL-------FDRIYTHQSDVWSFGVLLWEIFTLGGSPY 238
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 97/211 (45%), Gaps = 28/211 (13%)
Query: 19 IKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTI-------ERDIMVKSKCPYIV 71
IKR + G FG++++ + NT V K L+ P T+ E IM K K +V
Sbjct: 14 IKR-LGNGQFGEVWM--GTWNGNTKVAIKTLK---PGTMSPESFLEEAQIMKKLKHDKLV 67
Query: 72 NLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGY 131
L Y+ +Y + EY+ G + L++ L ++A + Y+ + Y
Sbjct: 68 QL-YAVVSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNY 126
Query: 132 VHRDIKPDNMLLSATGHLKLTDFGSATQVDKN---GRIKSIVPVGTPEYVAPEVLEWMEG 188
+HRD++ N+L+ K+ DFG A ++ N R + P+ ++ APE
Sbjct: 127 IHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPI---KWTAPEA-----A 178
Query: 189 NHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
+G +T D+WS G++ EL+T G P+
Sbjct: 179 LYGR--FTIKSDVWSFGILLTELVTKGRVPY 207
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 96/218 (44%), Gaps = 41/218 (18%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVL----REKMPNTIERDIMVKSKCPY--IVNLF-- 74
I QG FG+++ +++ +KKVL +E P T R+I + + +VNL
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 75 -------YSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYL- 126
Y+ + +Y + ++ E+ G LS +F + E+ + +Q L
Sbjct: 86 CRTKASPYN-RCKASIYLVFDFC---------EHDLAGLLSNVLVKFTLSEIKRVMQMLL 135
Query: 127 HGLGYVHR------DIKPDNMLLSATGHLKLTDFG--SATQVDKNGRIKSIVP-VGTPEY 177
+GL Y+HR D+K N+L++ G LKL DFG A + KN + V T Y
Sbjct: 136 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 178 VAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGS 215
PE+L G Y DLW G + E+ T S
Sbjct: 196 RPPELL------LGERDYGPPIDLWGAGCIMAEMWTRS 227
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 103/235 (43%), Gaps = 56/235 (23%)
Query: 23 IQQGNFGDIYLVE------EKQSHNTFVMKKVLREKMPNTIERDI--------MVK--SK 66
+ +G FG + L E +K + T V K+L+ + E+D+ M+K K
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKS---DATEKDLSDLISEMEMMKMIGK 81
Query: 67 CPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLE--------------NQPHGYLSESKA 112
I+NL + +Y I+EY + G+ L+ + P LS
Sbjct: 82 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 141
Query: 113 RFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDK--------NG 164
Y++A+ ++YL +HRD+ N+L++ +K+ DFG A + NG
Sbjct: 142 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 201
Query: 165 RIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
R+ PV +++APE L YT D+WS GV+ +E+ T G +P+
Sbjct: 202 RL----PV---KWMAPEAL-------FDRIYTHQSDVWSFGVLLWEIFTLGGSPY 242
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 26/205 (12%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVLR-----EKMPNTIERDIMVKSKC-----PYIVN 72
I G +G +Y + S + FV K +R E +P + R++ + + P +V
Sbjct: 12 IGVGAYGTVYKARDPHSGH-FVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVR 70
Query: 73 LF----YSFQDMN-HVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLH 127
L S D V + E+V D T L+ P L + + + + + +LH
Sbjct: 71 LMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLH 129
Query: 128 GLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWME 187
VHRD+KP+N+L+++ G +KL DFG A + + V T Y APEVL
Sbjct: 130 ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPV--VVTLWYRAPEVLL--- 184
Query: 188 GNHGSDGYTGSCDLWSIGVVSYELL 212
Y D+WS+G + E+
Sbjct: 185 ----QSTYATPVDMWSVGCIFAEMF 205
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 67/145 (46%), Gaps = 19/145 (13%)
Query: 85 FIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLL- 143
+ EY+ DF L + L++ RFY+YEL +A+ Y H G +HRD+KP N+++
Sbjct: 117 LVFEYINNTDFKQLYQ-----ILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMID 171
Query: 144 SATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWS 203
L+L D+G A V V + + PE+L Y S D+WS
Sbjct: 172 HQQKKLRLIDWGLAEFYHPAQEYN--VRVASRYFKGPELLV------DYQMYDYSLDMWS 223
Query: 204 IGVVSYELLTGSTPF-----NYETL 223
+G + ++ PF NY+ L
Sbjct: 224 LGCMLASMIFRREPFFHGQDNYDQL 248
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 75/145 (51%), Gaps = 24/145 (16%)
Query: 83 VYFIMEYVTGGDFVTLLEN-----QPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIK 137
+Y I E++ G + L++ QP L + A ++A+ + ++ Y+HRD++
Sbjct: 257 IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSA-----QIAEGMAFIEQRNYIHRDLR 311
Query: 138 PDNMLLSATGHLKLTDFGSATQVDKN---GRIKSIVPVGTPEYVAPEVLEWMEGNHGSDG 194
N+L+SA+ K+ DFG A ++ N R + P+ ++ APE + N GS
Sbjct: 312 AANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPI---KWTAPEAI-----NFGS-- 361
Query: 195 YTGSCDLWSIGVVSYELLT-GSTPF 218
+T D+WS G++ E++T G P+
Sbjct: 362 FTIKSDVWSFGILLMEIVTYGRIPY 386
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 34/180 (18%)
Query: 58 ERDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIY 117
E+D K+ C V +F F H+ E + F L +N Y + R +
Sbjct: 89 EKDPDNKNLC---VQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPY-PIHQVRHMAF 144
Query: 118 ELAQAVQYLHGLGYVHRDIKPDNMLLSATGH-------------------LKLTDFGSAT 158
+L QAV++LH H D+KP+N+L + + +++ DFGSAT
Sbjct: 145 QLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSAT 204
Query: 159 QVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
++ S + V T Y APEV+ + G++ CD+WSIG + +E G T F
Sbjct: 205 FDHEH---HSTI-VSTRHYRAPEVILEL-------GWSQPCDVWSIGCIIFEYYVGFTLF 253
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 93/229 (40%), Gaps = 44/229 (19%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPN-TIERDIMVKSKCPYIVNLF 74
DF I G FG ++ + + T+V+++V K N ER++ +K ++ +
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRV---KYNNEKAEREVKALAKLDHVNIVH 69
Query: 75 Y------------------------------SFQDMNHVYFI-MEYVTGGDFVTLLENQP 103
Y S + FI ME+ G +E +
Sbjct: 70 YNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR 129
Query: 104 HGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKN 163
L + A ++ + V Y+H +HRD+KP N+ L T +K+ DFG T + +
Sbjct: 130 GEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKND 189
Query: 164 GRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELL 212
G K GT Y++PE + S Y DL+++G++ ELL
Sbjct: 190 G--KRTRSKGTLRYMSPEQI-------SSQDYGKEVDLYALGLILAELL 229
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 97/214 (45%), Gaps = 25/214 (11%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVLREK--MPNTI--ERDIMVKSKCPYIVNLFYSFQ 78
+ QG FG++++ + T V K L+ P E +M K + +V L Y+
Sbjct: 193 LGQGCFGEVWM--GTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQL-YAVV 249
Query: 79 DMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKP 138
+Y + EY++ G + L+ + YL + ++A + Y+ + YVHRD++
Sbjct: 250 SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRA 309
Query: 139 DNMLLSATGHLKLTDFGSATQVDKN---GRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGY 195
N+L+ K+ DFG ++ N R + P+ ++ APE + G +
Sbjct: 310 ANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPI---KWTAPEAA--LYGR-----F 359
Query: 196 TGSCDLWSIGVVSYELLT-GSTPF----NYETLD 224
T D+WS G++ EL T G P+ N E LD
Sbjct: 360 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLD 393
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 93/203 (45%), Gaps = 23/203 (11%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTI--ERDIMVKSKCPYIVNLF-YSFQD 79
I +G FGD+ L + + N +K + + E +M + + +V L ++
Sbjct: 20 IGKGEFGDVMLGDYRG--NKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 77
Query: 80 MNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPD 139
+Y + EY+ G V L ++ L + ++ +A++YL G +VHRD+
Sbjct: 78 KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAAR 137
Query: 140 NMLLSATGHLKLTDFG---SATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYT 196
N+L+S K++DFG A+ G++ PV ++ APE L ++
Sbjct: 138 NVLVSEDNVAKVSDFGLTKEASSTQDTGKL----PV---KWTAPEALR-------EAAFS 183
Query: 197 GSCDLWSIGVVSYELLT-GSTPF 218
D+WS G++ +E+ + G P+
Sbjct: 184 TKSDVWSFGILLWEIYSFGRVPY 206
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 98/225 (43%), Gaps = 38/225 (16%)
Query: 12 VSASDFDIKRFIQQGNFGDIYL-----VEEKQSHNTFVMKKV-----LREKMPNTIERDI 61
VS + R + QG+FG +Y + + ++ +K V LRE++ E +
Sbjct: 14 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASV 73
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLL-------ENQPHGYLSESKARF 114
M C ++V L +ME + GD + L EN P +
Sbjct: 74 MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI 133
Query: 115 YIY-ELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVD------KNGRIK 167
+ E+A + YL+ +VHRD+ N +++ +K+ DFG + K G K
Sbjct: 134 QMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGG--K 191
Query: 168 SIVPVGTPEYVAPEVLEWMEGNHGSDG-YTGSCDLWSIGVVSYEL 211
++PV ++APE L+ DG +T S D+WS GVV +E+
Sbjct: 192 GLLPV---RWMAPESLK--------DGVFTTSSDMWSFGVVLWEI 225
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 90/203 (44%), Gaps = 26/203 (12%)
Query: 25 QGNFGDIYLVEEKQSHNTFV-------MKKVLREKMPNTIERDIMVKSKCPY--IVNLFY 75
+G FG +Y + +NT V M + E++ +++I V +KC + +V L
Sbjct: 32 EGGFGVVY---KGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLG 88
Query: 76 SFQDMNHVYFIMEYVTGG---DFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYV 132
D + + + Y G D ++ L+ P LS A + +LH ++
Sbjct: 89 FSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPP--LSWHXRCKIAQGAANGINFLHENHHI 146
Query: 133 HRDIKPDNMLLSATGHLKLTDFGSATQVDKNGR-IKSIVPVGTPEYVAPEVLEWMEGNHG 191
HRDIK N+LL K++DFG A +K + + VGT Y APE L
Sbjct: 147 HRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALRGE----- 201
Query: 192 SDGYTGSCDLWSIGVVSYELLTG 214
T D++S GVV E++TG
Sbjct: 202 ---ITPKSDIYSFGVVLLEIITG 221
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 26/205 (12%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVLR-----EKMPNTIERDIMVKSKC-----PYIVN 72
I G +G +Y + S + FV K +R E +P + R++ + + P +V
Sbjct: 12 IGVGAYGTVYKARDPHSGH-FVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVR 70
Query: 73 LF----YSFQDMN-HVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLH 127
L S D V + E+V D T L+ P L + + + + + +LH
Sbjct: 71 LMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLH 129
Query: 128 GLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWME 187
VHRD+KP+N+L+++ G +KL DFG A + + V T Y APEVL
Sbjct: 130 ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPV--VVTLWYRAPEVLL--- 184
Query: 188 GNHGSDGYTGSCDLWSIGVVSYELL 212
Y D+WS+G + E+
Sbjct: 185 ----QSTYATPVDMWSVGCIFAEMF 205
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 100/234 (42%), Gaps = 47/234 (20%)
Query: 10 KNVSASDFDIKRFIQQGNFGDIY--LVEEKQSHNTFVMKKVLREKMPNTIERD------I 61
K + AS I++ I G FG++ ++ V K L+ + RD I
Sbjct: 3 KEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASI 62
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYEL-- 119
M + P I++L V I EY+ G +L ++ RF + +L
Sbjct: 63 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSL--------DAFLRKNDGRFTVIQLVG 114
Query: 120 -----AQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFG---------SATQVDKNGR 165
++YL + YVHRD+ N+L+++ K++DFG A + G+
Sbjct: 115 MLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGK 174
Query: 166 IKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
I P+ + APE + + + +T + D+WS G+V +E+++ G P+
Sbjct: 175 I----PI---RWTAPEAIAYRK-------FTSASDVWSYGIVMWEVMSYGERPY 214
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 68/149 (45%), Gaps = 20/149 (13%)
Query: 107 LSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSA----TGHLKLTDFGSATQVDK 162
L + +Y++ + YLH +HRD+KP N+L+ G +K+ D G A
Sbjct: 125 LPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLF-- 182
Query: 163 NGRIKSIVP----VGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
N +K + V T Y APE+L G+ YT + D+W+IG + ELLT F
Sbjct: 183 NSPLKPLADLDPVVVTFWYRAPELLL------GARHYTKAIDIWAIGCIFAELLTSEPIF 236
Query: 219 NYETLDMTYSSILACDTEDTV----SFPS 243
+ D+ S+ D D + FP+
Sbjct: 237 HCRQEDIKTSNPYHHDQLDRIFNVMGFPA 265
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 103/235 (43%), Gaps = 56/235 (23%)
Query: 23 IQQGNFGDIYLVE------EKQSHNTFVMKKVLREKMPNTIERDI--------MVK--SK 66
+ +G FG + L E +K + T V K+L+ + E+D+ M+K K
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKS---DATEKDLSDLISEMEMMKMIGK 84
Query: 67 CPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLE--------------NQPHGYLSESKA 112
I+NL + +Y I+EY + G+ L+ + P LS
Sbjct: 85 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 144
Query: 113 RFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDK--------NG 164
Y++A+ ++YL +HRD+ N+L++ +K+ DFG A + NG
Sbjct: 145 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 204
Query: 165 RIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
R+ PV +++APE L YT D+WS GV+ +E+ T G +P+
Sbjct: 205 RL----PV---KWMAPEALF-------DRIYTHQSDVWSFGVLLWEIFTLGGSPY 245
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 103/235 (43%), Gaps = 56/235 (23%)
Query: 23 IQQGNFGDIYLVE------EKQSHNTFVMKKVLREKMPNTIERDI--------MVK--SK 66
+ +G FG + L E +K + T V K+L+ + E+D+ M+K K
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKS---DATEKDLSDLISEMEMMKMIGK 85
Query: 67 CPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLE--------------NQPHGYLSESKA 112
I+NL + +Y I+EY + G+ L+ + P LS
Sbjct: 86 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 145
Query: 113 RFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDK--------NG 164
Y++A+ ++YL +HRD+ N+L++ +K+ DFG A + NG
Sbjct: 146 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 205
Query: 165 RIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
R+ PV +++APE L YT D+WS GV+ +E+ T G +P+
Sbjct: 206 RL----PV---KWMAPEALF-------DRIYTHQSDVWSFGVLLWEIFTLGGSPY 246
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 58/101 (57%), Gaps = 5/101 (4%)
Query: 120 AQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDK-NGRIKSIVPVGTPEYV 178
AQ + YLH +HRD+K +N+ L +K+ DFG AT+ + +G + G+ ++
Sbjct: 114 AQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 173
Query: 179 APEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFN 219
APEV+ + N Y+ D+++ G+V YEL+TG P++
Sbjct: 174 APEVIRMQDKN----PYSFQSDVYAFGIVLYELMTGQLPYS 210
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 105/235 (44%), Gaps = 56/235 (23%)
Query: 23 IQQGNFGDIYLVE------EKQSHNTFVMKKVLREKMPNTIERDI--------MVK--SK 66
+ +G FG + + E +K V K+L++ + E+D+ M+K K
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD---DATEKDLSDLVSEMEMMKMIGK 99
Query: 67 CPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLE-NQPHGY--------LSESKARF--- 114
I+NL + +Y I+EY + G+ L +P G + E + F
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 115 --YIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDK--------NG 164
Y+LA+ ++YL +HRD+ N+L++ +++ DFG A ++ NG
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNG 219
Query: 165 RIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
R+ PV +++APE L YT D+WS GV+ +E+ T G +P+
Sbjct: 220 RL----PV---KWMAPEAL-------FDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 103/235 (43%), Gaps = 56/235 (23%)
Query: 23 IQQGNFGDIYLVE------EKQSHNTFVMKKVLREKMPNTIERDI--------MVK--SK 66
+ +G FG + L E +K + T V K+L+ + E+D+ M+K K
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKS---DATEKDLSDLISEMEMMKMIGK 92
Query: 67 CPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLE--------------NQPHGYLSESKA 112
I+NL + +Y I+EY + G+ L+ + P LS
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 113 RFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDK--------NG 164
Y++A+ ++YL +HRD+ N+L++ +K+ DFG A + NG
Sbjct: 153 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 165 RIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
R+ PV +++APE L YT D+WS GV+ +E+ T G +P+
Sbjct: 213 RL----PV---KWMAPEALF-------DRIYTHQSDVWSFGVLLWEIFTLGGSPY 253
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 103/235 (43%), Gaps = 56/235 (23%)
Query: 23 IQQGNFGDIYLVE------EKQSHNTFVMKKVLREKMPNTIERDI--------MVK--SK 66
+ +G FG + L E +K + T V K+L+ + E+D+ M+K K
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKS---DATEKDLSDLISEMEMMKMIGK 92
Query: 67 CPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLE--------------NQPHGYLSESKA 112
I+NL + +Y I+EY + G+ L+ + P LS
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 113 RFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDK--------NG 164
Y++A+ ++YL +HRD+ N+L++ +K+ DFG A + NG
Sbjct: 153 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 165 RIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
R+ PV +++APE L YT D+WS GV+ +E+ T G +P+
Sbjct: 213 RL----PV---KWMAPEALF-------DRIYTHQSDVWSFGVLLWEIFTLGGSPY 253
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 93/203 (45%), Gaps = 23/203 (11%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTI--ERDIMVKSKCPYIVNLF-YSFQD 79
I +G FGD+ L + + N +K + + E +M + + +V L ++
Sbjct: 14 IGKGEFGDVMLGDYRG--NKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 71
Query: 80 MNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPD 139
+Y + EY+ G V L ++ L + ++ +A++YL G +VHRD+
Sbjct: 72 KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAAR 131
Query: 140 NMLLSATGHLKLTDFG---SATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYT 196
N+L+S K++DFG A+ G++ PV ++ APE L ++
Sbjct: 132 NVLVSEDNVAKVSDFGLTKEASSTQDTGKL----PV---KWTAPEALR-------EKKFS 177
Query: 197 GSCDLWSIGVVSYELLT-GSTPF 218
D+WS G++ +E+ + G P+
Sbjct: 178 TKSDVWSFGILLWEIYSFGRVPY 200
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 98/225 (43%), Gaps = 38/225 (16%)
Query: 12 VSASDFDIKRFIQQGNFGDIYL-----VEEKQSHNTFVMKKV-----LREKMPNTIERDI 61
VS + R + QG+FG +Y + + ++ +K V LRE++ E +
Sbjct: 14 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASV 73
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLL-------ENQPHGYLSESKARF 114
M C ++V L +ME + GD + L EN P +
Sbjct: 74 MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI 133
Query: 115 YIY-ELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVD------KNGRIK 167
+ E+A + YL+ +VHRD+ N +++ +K+ DFG + K G K
Sbjct: 134 QMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGG--K 191
Query: 168 SIVPVGTPEYVAPEVLEWMEGNHGSDG-YTGSCDLWSIGVVSYEL 211
++PV ++APE L+ DG +T S D+WS GVV +E+
Sbjct: 192 GLLPV---RWMAPESLK--------DGVFTTSSDMWSFGVVLWEI 225
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 93/203 (45%), Gaps = 23/203 (11%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTI--ERDIMVKSKCPYIVNLF-YSFQD 79
I +G FGD+ L + + N +K + + E +M + + +V L ++
Sbjct: 29 IGKGEFGDVMLGDYRG--NKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 86
Query: 80 MNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPD 139
+Y + EY+ G V L ++ L + ++ +A++YL G +VHRD+
Sbjct: 87 KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAAR 146
Query: 140 NMLLSATGHLKLTDFG---SATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYT 196
N+L+S K++DFG A+ G++ PV ++ APE L ++
Sbjct: 147 NVLVSEDNVAKVSDFGLTKEASSTQDTGKL----PV---KWTAPEALR-------EKKFS 192
Query: 197 GSCDLWSIGVVSYELLT-GSTPF 218
D+WS G++ +E+ + G P+
Sbjct: 193 TKSDVWSFGILLWEIYSFGRVPY 215
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 98/212 (46%), Gaps = 23/212 (10%)
Query: 14 ASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREK-MPNTIERDIMV--------K 64
A +++ + I +G+FG + + + H +K V EK +I + K
Sbjct: 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDK 155
Query: 65 SKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQ 124
++++ +F NH+ E ++ + + +N+ G+ S R + + + Q +
Sbjct: 156 DNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGF-SLPLVRKFAHSILQCLD 214
Query: 125 YLHGLGYVHRDIKPDNMLLSATGH--LKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV 182
LH +H D+KP+N+LL G +K+ DFGS+ ++ R+ + + + Y APEV
Sbjct: 215 ALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCY--EHQRVYTXIQ--SRFYRAPEV 270
Query: 183 LEWMEGNHGSDGYTGSCDLWSIGVVSYELLTG 214
+ Y D+WS+G + ELLTG
Sbjct: 271 ILGAR-------YGMPIDMWSLGCILAELLTG 295
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 5/101 (4%)
Query: 120 AQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDK-NGRIKSIVPVGTPEYV 178
AQ + YLH +HRD+K +N+ L +K+ DFG AT + +G + G+ ++
Sbjct: 141 AQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 200
Query: 179 APEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFN 219
APEV+ + N Y+ D+++ G+V YEL+TG P++
Sbjct: 201 APEVIRMQDKN----PYSFQSDVYAFGIVLYELMTGQLPYS 237
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 103/235 (43%), Gaps = 56/235 (23%)
Query: 23 IQQGNFGDIYLVE------EKQSHNTFVMKKVLREKMPNTIERDI--------MVK--SK 66
+ +G FG + L E +K + T V K+L+ + E+D+ M+K K
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKS---DATEKDLSDLISEMEMMKMIGK 92
Query: 67 CPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLE--------------NQPHGYLSESKA 112
I+NL + +Y I+EY + G+ L+ + P LS
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 152
Query: 113 RFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDK--------NG 164
Y++A+ ++YL +HRD+ N+L++ +K+ DFG A + NG
Sbjct: 153 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 165 RIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
R+ PV +++APE L YT D+WS GV+ +E+ T G +P+
Sbjct: 213 RL----PV---KWMAPEALF-------DRIYTHQSDVWSFGVLLWEIFTLGGSPY 253
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 73/142 (51%), Gaps = 28/142 (19%)
Query: 83 VYFIMEYVTGGDFVTLLEN-----QPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIK 137
+Y I E++ G + L++ QP L + A ++A+ + ++ Y+HRD++
Sbjct: 251 IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSA-----QIAEGMAFIEQRNYIHRDLR 305
Query: 138 PDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTG 197
N+L+SA+ K+ DFG A R+ + P+ ++ APE + N GS +T
Sbjct: 306 AANILVSASLVCKIADFGLA-------RVGAKFPI---KWTAPEAI-----NFGS--FTI 348
Query: 198 SCDLWSIGVVSYELLT-GSTPF 218
D+WS G++ E++T G P+
Sbjct: 349 KSDVWSFGILLMEIVTYGRIPY 370
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 73/169 (43%), Gaps = 35/169 (20%)
Query: 71 VNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSE--SKARFYIYELAQAVQYLHG 128
V + F+ H+ + E + + + EN G+L R Y++ ++V +LH
Sbjct: 80 VQMLEWFEHHGHICIVFELLGLSTYDFIKEN---GFLPFRLDHIRKMAYQICKSVNFLHS 136
Query: 129 LGYVHRDIKPDNMLLSATGH-------------------LKLTDFGSATQVDKNGRIKSI 169
H D+KP+N+L + + +K+ DFGSAT D++
Sbjct: 137 NKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHS---- 192
Query: 170 VPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
V T Y APEV+ + G++ CD+WSIG + E G T F
Sbjct: 193 TLVSTRHYRAPEVILAL-------GWSQPCDVWSIGCILIEYYLGFTVF 234
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 93/196 (47%), Gaps = 19/196 (9%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVLRE-KMPNTIERDIM-VKS-----KCPYIVNLFY 75
+ G++G+++ V K+ + +K+ + + P R + V S + P V L
Sbjct: 65 LGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQ 124
Query: 76 SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRD 135
++++ +Y E + G E L E++ Y+ + A+ +LH G VH D
Sbjct: 125 AWEEGGILYLQTE-LCGPSLQQHCEAW-GASLPEAQVWGYLRDTLLALAHLHSQGLVHLD 182
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGY 195
+KP N+ L G KL DFG ++ G V G P Y+APE+L +G++G+
Sbjct: 183 VKPANIFLGPRGRCKLGDFGLLVELGTAG--AGEVQEGDPRYMAPELL---QGSYGT--- 234
Query: 196 TGSCDLWSIGVVSYEL 211
+ D++S+G+ E+
Sbjct: 235 --AADVFSLGLTILEV 248
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 103/235 (43%), Gaps = 39/235 (16%)
Query: 14 ASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLR--EKMPNTI-ERDIMVKSKCPYI 70
ASDF+ + QG FG + + +KK+ EK+ + E ++ Y+
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYV 64
Query: 71 VNLFYSFQDMNH-------------VYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIY 117
V + ++ + + ++ EY L+ ++ + R +
Sbjct: 65 VRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLF-R 123
Query: 118 ELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSI----VP-- 171
++ +A+ Y+H G +HR++KP N+ + + ++K+ DFG A V ++ I + +P
Sbjct: 124 QILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 172 -------VGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFN 219
+GT YVA EVL+ G+ Y D +S+G++ +E + PF+
Sbjct: 184 SDNLTSAIGTAXYVATEVLD------GTGHYNEKIDXYSLGIIFFEXI---YPFS 229
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 58/103 (56%), Gaps = 5/103 (4%)
Query: 118 ELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDK-NGRIKSIVPVGTPE 176
+ AQ + YLH +HRD+K +N+ L +K+ DFG AT + +G + G+
Sbjct: 140 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 199
Query: 177 YVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFN 219
++APEV+ + N Y+ D+++ G+V YEL+TG P++
Sbjct: 200 WMAPEVIRMQDKNP----YSFQSDVYAFGIVLYELMTGQLPYS 238
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 98/212 (46%), Gaps = 23/212 (10%)
Query: 14 ASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREK-MPNTIERDIMV--------K 64
A +++ + I +G+FG + + + H +K V EK +I + K
Sbjct: 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDK 155
Query: 65 SKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQ 124
++++ +F NH+ E ++ + + +N+ G+ S R + + + Q +
Sbjct: 156 DNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGF-SLPLVRKFAHSILQCLD 214
Query: 125 YLHGLGYVHRDIKPDNMLLSATGH--LKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV 182
LH +H D+KP+N+LL G +K+ DFGS+ ++ R+ + + + Y APEV
Sbjct: 215 ALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCY--EHQRVYTXIQ--SRFYRAPEV 270
Query: 183 LEWMEGNHGSDGYTGSCDLWSIGVVSYELLTG 214
+ Y D+WS+G + ELLTG
Sbjct: 271 ILGAR-------YGMPIDMWSLGCILAELLTG 295
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 100/227 (44%), Gaps = 38/227 (16%)
Query: 12 VSASDFDIKRFIQQGNFGDIY-----LVEEKQSHNTFVMKKV-----LREKMPNTIERDI 61
V+ + R + QG+FG +Y V + + +K V +RE++ E +
Sbjct: 44 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 103
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLL-------ENQP-HGYLSESKAR 113
M + C ++V L IME +T GD + L EN P S SK
Sbjct: 104 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 163
Query: 114 FYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQV------DKNGRIK 167
E+A + YL+ +VHRD+ N +++ +K+ DFG + K G K
Sbjct: 164 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG--K 221
Query: 168 SIVPVGTPEYVAPEVLEWMEGNHGSDG-YTGSCDLWSIGVVSYELLT 213
++PV +++PE L+ DG +T D+WS GVV +E+ T
Sbjct: 222 GLLPV---RWMSPESLK--------DGVFTTYSDVWSFGVVLWEIAT 257
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 99/227 (43%), Gaps = 38/227 (16%)
Query: 12 VSASDFDIKRFIQQGNFGDIY-----LVEEKQSHNTFVMKKV-----LREKMPNTIERDI 61
V+ + R + QG+FG +Y V + + +K V +RE++ E +
Sbjct: 9 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 68
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLL-------ENQP-HGYLSESKAR 113
M + C ++V L IME +T GD + L EN P S SK
Sbjct: 69 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 128
Query: 114 FYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQV------DKNGRIK 167
E+A + YL+ +VHRD+ N ++ +K+ DFG + K G K
Sbjct: 129 QMAGEIADGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGG--K 186
Query: 168 SIVPVGTPEYVAPEVLEWMEGNHGSDG-YTGSCDLWSIGVVSYELLT 213
++PV +++PE L+ DG +T D+WS GVV +E+ T
Sbjct: 187 GLLPV---RWMSPESLK--------DGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 98/225 (43%), Gaps = 38/225 (16%)
Query: 12 VSASDFDIKRFIQQGNFGDIYL-----VEEKQSHNTFVMKKV-----LREKMPNTIERDI 61
VS + R + QG+FG +Y + + ++ +K V LRE++ E +
Sbjct: 13 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASV 72
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLL-------ENQPHGYLSESKARF 114
M C ++V L +ME + GD + L EN P +
Sbjct: 73 MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI 132
Query: 115 YIY-ELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQV------DKNGRIK 167
+ E+A + YL+ +VHRD+ N +++ +K+ DFG + K G K
Sbjct: 133 QMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGG--K 190
Query: 168 SIVPVGTPEYVAPEVLEWMEGNHGSDG-YTGSCDLWSIGVVSYEL 211
++PV ++APE L+ DG +T S D+WS GVV +E+
Sbjct: 191 GLLPV---RWMAPESLK--------DGVFTTSSDMWSFGVVLWEI 224
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 26/205 (12%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVLR-----EKMPNTIERDIMVKSKC-----PYIVN 72
I G +G +Y + S + FV K +R E +P + R++ + + P +V
Sbjct: 12 IGVGAYGTVYKARDPHSGH-FVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVR 70
Query: 73 LF----YSFQDMN-HVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLH 127
L S D V + E+V D T L+ P L + + + + + +LH
Sbjct: 71 LMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLH 129
Query: 128 GLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWME 187
VHRD+KP+N+L+++ G +KL DFG A + + V T Y APEVL
Sbjct: 130 ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPV--VVTLWYRAPEVLL--- 184
Query: 188 GNHGSDGYTGSCDLWSIGVVSYELL 212
Y D+WS+G + E+
Sbjct: 185 ----QSTYATPVDMWSVGCIFAEMF 205
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 93/203 (45%), Gaps = 23/203 (11%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTI--ERDIMVKSKCPYIVNLF-YSFQD 79
I +G FGD+ L + + N +K + + E +M + + +V L ++
Sbjct: 201 IGKGEFGDVMLGDYRG--NKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 258
Query: 80 MNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPD 139
+Y + EY+ G V L ++ L + ++ +A++YL G +VHRD+
Sbjct: 259 KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAAR 318
Query: 140 NMLLSATGHLKLTDFG---SATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYT 196
N+L+S K++DFG A+ G++ PV ++ APE L ++
Sbjct: 319 NVLVSEDNVAKVSDFGLTKEASSTQDTGKL----PV---KWTAPEALR-------EKKFS 364
Query: 197 GSCDLWSIGVVSYELLT-GSTPF 218
D+WS G++ +E+ + G P+
Sbjct: 365 TKSDVWSFGILLWEIYSFGRVPY 387
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 75/158 (47%), Gaps = 29/158 (18%)
Query: 85 FIMEYVTGGDFVTLLENQ--PHGYLSESKARFYIYELAQAVQYLHG---LGYVHRDIKPD 139
+ME+ GG +L + P L + ++A+ + YLH + +HRD+K
Sbjct: 83 LVMEFARGGPLNRVLSGKRIPPDILVN-----WAVQIARGMNYLHDEAIVPIIHRDLKSS 137
Query: 140 NMLLS--------ATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHG 191
N+L+ + LK+TDFG A + + ++ + G ++APEV+
Sbjct: 138 NILILQKVENGDLSNKILKITDFGLAREWHRTTKMSA---AGAYAWMAPEVIR------- 187
Query: 192 SDGYTGSCDLWSIGVVSYELLTGSTPF-NYETLDMTYS 228
+ ++ D+WS GV+ +ELLTG PF + L + Y
Sbjct: 188 ASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYG 225
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 94/205 (45%), Gaps = 15/205 (7%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPN----TIERDIMVKSKCPYIVNLFYSFQ 78
+ G FG + L + K ++ V K+++E + E M+K P +V +
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAV--KMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCS 73
Query: 79 DMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKP 138
+Y + EY++ G + L + G L S+ Y++ + + +L ++HRD+
Sbjct: 74 KEYPIYIVTEYISNGCLLNYLRSHGKG-LEPSQLLEMCYDVCEGMAFLESHQFIHRDLAA 132
Query: 139 DNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGS 198
N L+ +K++DFG V + + S+ ++ APEV + + Y+
Sbjct: 133 RNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFK-------YSSK 185
Query: 199 CDLWSIGVVSYELLT-GSTPFNYET 222
D+W+ G++ +E+ + G P++ T
Sbjct: 186 SDVWAFGILMWEVFSLGKMPYDLYT 210
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 104/235 (44%), Gaps = 56/235 (23%)
Query: 23 IQQGNFGDIYLVE------EKQSHNTFVMKKVLREKMPNTIERDI--------MVK--SK 66
+ +G FG + + E +K V K+L++ + E+D+ M+K K
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD---DATEKDLSDLVSEMEMMKMIGK 99
Query: 67 CPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLE-NQPHGY--------LSESKARF--- 114
I+NL + +Y I+ Y + G+ L +P G + E + F
Sbjct: 100 HKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 115 --YIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDK--------NG 164
Y+LA+ ++YL +HRD+ N+L++ +K+ DFG A ++ NG
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 165 RIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
R+ PV +++APE L YT D+WS GV+ +E+ T G +P+
Sbjct: 220 RL----PV---KWMAPEALF-------DRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 5/101 (4%)
Query: 120 AQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDK-NGRIKSIVPVGTPEYV 178
AQ + YLH +HRD+K +N+ L +K+ DFG AT + +G + G+ ++
Sbjct: 116 AQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 175
Query: 179 APEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFN 219
APEV+ + N Y+ D+++ G+V YEL+TG P++
Sbjct: 176 APEVIRMQDKN----PYSFQSDVYAFGIVLYELMTGQLPYS 212
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 105/235 (44%), Gaps = 56/235 (23%)
Query: 23 IQQGNFGDIYLVE------EKQSHNTFVMKKVLREKMPNTIERDI--------MVK--SK 66
+ +G FG + + E +K V K+L++ + E+D+ M+K K
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD---DATEKDLSDLVSEMEMMKMIGK 99
Query: 67 CPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLE-NQPHGY--------LSESKARF--- 114
I++L + +Y I+EY + G+ L +P G + E + F
Sbjct: 100 HKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 115 --YIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDK--------NG 164
Y+LA+ ++YL +HRD+ N+L++ +K+ DFG A ++ NG
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 165 RIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
R+ PV +++APE L YT D+WS GV+ +E+ T G +P+
Sbjct: 220 RL----PV---KWMAPEAL-------FDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 5/101 (4%)
Query: 120 AQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDK-NGRIKSIVPVGTPEYV 178
AQ + YLH +HRD+K +N+ L +K+ DFG AT + +G + G+ ++
Sbjct: 119 AQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 178
Query: 179 APEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFN 219
APEV+ + N Y+ D+++ G+V YEL+TG P++
Sbjct: 179 APEVIRMQDKN----PYSFQSDVYAFGIVLYELMTGQLPYS 215
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 5/101 (4%)
Query: 120 AQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDK-NGRIKSIVPVGTPEYV 178
AQ + YLH +HRD+K +N+ L +K+ DFG AT + +G + G+ ++
Sbjct: 119 AQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 178
Query: 179 APEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFN 219
APEV+ + N Y+ D+++ G+V YEL+TG P++
Sbjct: 179 APEVIRMQDKNP----YSFQSDVYAFGIVLYELMTGQLPYS 215
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 94/227 (41%), Gaps = 38/227 (16%)
Query: 12 VSASDFDIKRFIQQGNFGDIY-----LVEEKQSHNTFVMKKV-----LREKMPNTIERDI 61
V+ + R + QG+FG +Y V + + +K V +RE++ E +
Sbjct: 22 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 81
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLE-------NQP-HGYLSESKAR 113
M + C ++V L IME +T GD + L N P S SK
Sbjct: 82 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMI 141
Query: 114 FYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQV------DKNGRIK 167
E+A + YL+ +VHRD+ N +++ +K+ DFG + K G K
Sbjct: 142 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG--K 199
Query: 168 SIVPVGTPEYVAPEVLEWMEGNHGSDG-YTGSCDLWSIGVVSYELLT 213
++PV WM DG +T D+WS GVV +E+ T
Sbjct: 200 GLLPV-----------RWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 98/225 (43%), Gaps = 38/225 (16%)
Query: 12 VSASDFDIKRFIQQGNFGDIYL-----VEEKQSHNTFVMKKV-----LREKMPNTIERDI 61
VS + R + QG+FG +Y + + ++ +K V LRE++ E +
Sbjct: 14 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASV 73
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLL-------ENQPHGYLSESKARF 114
M C ++V L +ME + GD + L EN P +
Sbjct: 74 MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI 133
Query: 115 YIY-ELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQV------DKNGRIK 167
+ E+A + YL+ +VHRD+ N +++ +K+ DFG + K G K
Sbjct: 134 QMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGG--K 191
Query: 168 SIVPVGTPEYVAPEVLEWMEGNHGSDG-YTGSCDLWSIGVVSYEL 211
++PV ++APE L+ DG +T S D+WS GVV +E+
Sbjct: 192 GLLPV---RWMAPESLK--------DGVFTTSSDMWSFGVVLWEI 225
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 5/101 (4%)
Query: 120 AQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDK-NGRIKSIVPVGTPEYV 178
AQ + YLH +HRD+K +N+ L +K+ DFG AT + +G + G+ ++
Sbjct: 114 AQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 173
Query: 179 APEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFN 219
APEV+ + N Y+ D+++ G+V YEL+TG P++
Sbjct: 174 APEVIRMQDKN----PYSFQSDVYAFGIVLYELMTGQLPYS 210
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 94/212 (44%), Gaps = 23/212 (10%)
Query: 14 ASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREK-MPNTIERDIMV--------K 64
A +++ + I +G FG + + + H +K V EK +I + K
Sbjct: 96 AYRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDK 155
Query: 65 SKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQ 124
++++ +F NH+ E ++ + + +N+ G+ S R + + + Q +
Sbjct: 156 DNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGF-SLPLVRKFAHSILQCLD 214
Query: 125 YLHGLGYVHRDIKPDNMLLSATGH--LKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV 182
LH +H D+KP+N+LL G +K+ DFGS+ + + + + Y APEV
Sbjct: 215 ALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQ----RVYXXIQSRFYRAPEV 270
Query: 183 LEWMEGNHGSDGYTGSCDLWSIGVVSYELLTG 214
+ Y D+WS+G + ELLTG
Sbjct: 271 ILGAR-------YGMPIDMWSLGCILAELLTG 295
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 104/235 (44%), Gaps = 56/235 (23%)
Query: 23 IQQGNFGDIYLVE------EKQSHNTFVMKKVLREKMPNTIERDI--------MVK--SK 66
+ +G FG + + E +K V K+L++ + E+D+ M+K K
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD---DATEKDLSDLVSEMEMMKMIGK 99
Query: 67 CPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLE-NQPHGY--------LSESKARF--- 114
I+ L + +Y I+EY + G+ L +P G + E + F
Sbjct: 100 HKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 115 --YIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDK--------NG 164
Y+LA+ ++YL +HRD+ N+L++ +K+ DFG A ++ NG
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 165 RIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
R+ PV +++APE L YT D+WS GV+ +E+ T G +P+
Sbjct: 220 RL----PV---KWMAPEAL-------FDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 5/101 (4%)
Query: 120 AQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDK-NGRIKSIVPVGTPEYV 178
AQ + YLH +HRD+K +N+ L +K+ DFG AT + +G + G+ ++
Sbjct: 114 AQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 173
Query: 179 APEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFN 219
APEV+ + N Y+ D+++ G+V YEL+TG P++
Sbjct: 174 APEVIRMQDKN----PYSFQSDVYAFGIVLYELMTGQLPYS 210
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 113/260 (43%), Gaps = 46/260 (17%)
Query: 10 KNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNT----FVMKKVLREKMPNTIER------ 59
+++ D +KR + +G FG ++L E T V K L++ P R
Sbjct: 10 QHIKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKD--PTLAARKDFQRE 67
Query: 60 -DIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDF-----------VTLLENQPH--- 104
+++ + +IV + D + + + EY+ GD + L++ QP
Sbjct: 68 AELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAK 127
Query: 105 GYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNG 164
G L S+ ++A + YL +VHRD+ N L+ A +K+ DFG + V
Sbjct: 128 GELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTD 187
Query: 165 RIK----SIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPFN 219
+ +++P+ ++ PE + + + +T D+WS GV+ +E+ T G P+
Sbjct: 188 YYRVGGHTMLPI---RWMPPESIMYRK-------FTTESDVWSFGVILWEIFTYGKQPW- 236
Query: 220 YETLDMTYSSILACDTEDTV 239
++ + ++ C T+ V
Sbjct: 237 ---FQLSNTEVIECITQGRV 253
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 115/257 (44%), Gaps = 50/257 (19%)
Query: 4 VKELRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTI----ER 59
+KE+ +KN++ + R + G FG++Y + N +V + +P E
Sbjct: 42 LKEVPRKNIT-----LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL 96
Query: 60 DIMVKSKCPYIVNLF----------YSFQDMNHVYFIMEYVTGGDFVTLL-ENQPHGYLS 108
D ++++ I++ F S Q + + ++E + GGD + L E +P
Sbjct: 97 DFLMEA---LIISKFNHQNIVRCIGVSLQSLPR-FILLELMAGGDLKSFLRETRPRPSQP 152
Query: 109 ESKARFYIYELAQ----AVQYLHGLGYVHRDIKPDNMLLSATGH---LKLTDFGSATQVD 161
S A + +A+ QYL ++HRDI N LL+ G K+ DFG A +
Sbjct: 153 SSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY 212
Query: 162 KNGRIK----SIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GST 216
+ G + +++PV +++ PE +MEG +T D WS GV+ +E+ + G
Sbjct: 213 RAGYYRKGGCAMLPV---KWMPPEA--FMEGI-----FTSKTDTWSFGVLLWEIFSLGYM 262
Query: 217 PF----NYETLDMTYSS 229
P+ N E L+ S
Sbjct: 263 PYPSKSNQEVLEFVTSG 279
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 98/225 (43%), Gaps = 38/225 (16%)
Query: 12 VSASDFDIKRFIQQGNFGDIYL-----VEEKQSHNTFVMKKV-----LREKMPNTIERDI 61
VS + R + QG+FG +Y + + ++ +K V LRE++ E +
Sbjct: 14 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASV 73
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLL-------ENQPHGYLSESKARF 114
M C ++V L +ME + GD + L EN P +
Sbjct: 74 MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI 133
Query: 115 YIY-ELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQV------DKNGRIK 167
+ E+A + YL+ +VHRD+ N +++ +K+ DFG + K G K
Sbjct: 134 QMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGG--K 191
Query: 168 SIVPVGTPEYVAPEVLEWMEGNHGSDG-YTGSCDLWSIGVVSYEL 211
++PV ++APE L+ DG +T S D+WS GVV +E+
Sbjct: 192 GLLPV---RWMAPESLK--------DGVFTTSSDMWSFGVVLWEI 225
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 99/227 (43%), Gaps = 38/227 (16%)
Query: 12 VSASDFDIKRFIQQGNFGDIY-----LVEEKQSHNTFVMKKV-----LREKMPNTIERDI 61
V+ + R + QG+FG +Y V + + +K V +RE++ E +
Sbjct: 12 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 71
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLE-------NQP-HGYLSESKAR 113
M + C ++V L IME +T GD + L N P S SK
Sbjct: 72 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMI 131
Query: 114 FYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQV------DKNGRIK 167
E+A + YL+ +VHRD+ N +++ +K+ DFG + K G K
Sbjct: 132 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG--K 189
Query: 168 SIVPVGTPEYVAPEVLEWMEGNHGSDG-YTGSCDLWSIGVVSYELLT 213
++PV +++PE L+ DG +T D+WS GVV +E+ T
Sbjct: 190 GLLPV---RWMSPESLK--------DGVFTTYSDVWSFGVVLWEIAT 225
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 104/235 (44%), Gaps = 56/235 (23%)
Query: 23 IQQGNFGDIYLVE------EKQSHNTFVMKKVLREKMPNTIERDI--------MVK--SK 66
+ +G FG + + E +K V K+L++ + E+D+ M+K K
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD---DATEKDLSDLVSEMEMMKMIGK 99
Query: 67 CPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLE-NQPHGY--------LSESKARF--- 114
I+NL + +Y I+ Y + G+ L +P G + E + F
Sbjct: 100 HKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 115 --YIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDK--------NG 164
Y+LA+ ++YL +HRD+ N+L++ +K+ DFG A ++ NG
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 165 RIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
R+ PV +++APE L YT D+WS GV+ +E+ T G +P+
Sbjct: 220 RL----PV---KWMAPEALF-------DRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 115/257 (44%), Gaps = 50/257 (19%)
Query: 4 VKELRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTI----ER 59
+KE+ +KN++ + R + G FG++Y + N +V + +P E
Sbjct: 65 LKEVPRKNIT-----LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL 119
Query: 60 DIMVKSKCPYIVNLF----------YSFQDMNHVYFIMEYVTGGDFVTLL-ENQPHGYLS 108
D ++++ I++ F S Q + + ++E + GGD + L E +P
Sbjct: 120 DFLMEA---LIISKFNHQNIVRCIGVSLQSLPR-FILLELMAGGDLKSFLRETRPRPSQP 175
Query: 109 ESKARFYIYELAQ----AVQYLHGLGYVHRDIKPDNMLLSATGH---LKLTDFGSATQVD 161
S A + +A+ QYL ++HRDI N LL+ G K+ DFG A +
Sbjct: 176 SSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY 235
Query: 162 KNGRIK----SIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GST 216
+ G + +++PV +++ PE +MEG +T D WS GV+ +E+ + G
Sbjct: 236 RAGYYRKGGCAMLPV---KWMPPEA--FMEGI-----FTSKTDTWSFGVLLWEIFSLGYM 285
Query: 217 PF----NYETLDMTYSS 229
P+ N E L+ S
Sbjct: 286 PYPSKSNQEVLEFVTSG 302
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 10/130 (7%)
Query: 83 VYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNML 142
V + E+V D T L+ P L + + + + + +LH VHRD+KP+N+L
Sbjct: 94 VTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENIL 152
Query: 143 LSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLW 202
+++ G +KL DFG A + + V T Y APEVL Y D+W
Sbjct: 153 VTSGGTVKLADFGLARIYSYQMALTPV--VVTLWYRAPEVLL-------QSTYATPVDMW 203
Query: 203 SIGVVSYELL 212
S+G + E+
Sbjct: 204 SVGCIFAEMF 213
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 103/235 (43%), Gaps = 56/235 (23%)
Query: 23 IQQGNFGDIYLVE------EKQSHNTFVMKKVLREKMPNTIERDI--------MVK--SK 66
+ +G FG + L E +K + T V K+L+ + E+D+ M+K K
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKS---DATEKDLSDLISEMEMMKMIGK 133
Query: 67 CPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLE--------------NQPHGYLSESKA 112
I+NL + +Y I+EY + G+ L+ + P LS
Sbjct: 134 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 193
Query: 113 RFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDK--------NG 164
Y++A+ ++YL +HRD+ N+L++ +K+ DFG A + NG
Sbjct: 194 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 253
Query: 165 RIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
R+ PV +++APE L YT D+WS GV+ +E+ T G +P+
Sbjct: 254 RL----PV---KWMAPEALF-------DRIYTHQSDVWSFGVLLWEIFTLGGSPY 294
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 79/179 (44%), Gaps = 21/179 (11%)
Query: 118 ELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLK-------------LTDFGSATQVD--- 161
++A V +LH L +HRD+KP N+L+S + ++DFG ++D
Sbjct: 123 QIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQ 182
Query: 162 KNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPFN- 219
+ R P GT + APE+LE T S D++S+G V Y +L+ G PF
Sbjct: 183 SSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD 242
Query: 220 -YETLDMTYSSILACDTEDTVSFPSSIRLSTAMVNFVQSLVQKLDARLNMDQVLGHPVF 277
Y I + D + S I +T +++ Q + R +VL HP+F
Sbjct: 243 KYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLIS--QMIDHDPLKRPTAMKVLRHPLF 299
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 78/179 (43%), Gaps = 21/179 (11%)
Query: 118 ELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLK-------------LTDFGSATQVDKN- 163
++A V +LH L +HRD+KP N+L+S + ++DFG ++D
Sbjct: 123 QIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQ 182
Query: 164 --GRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPFN- 219
R P GT + APE+LE T S D++S+G V Y +L+ G PF
Sbjct: 183 XXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD 242
Query: 220 -YETLDMTYSSILACDTEDTVSFPSSIRLSTAMVNFVQSLVQKLDARLNMDQVLGHPVF 277
Y I + D + S I +T +++ Q + R +VL HP+F
Sbjct: 243 KYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLIS--QMIDHDPLKRPTAMKVLRHPLF 299
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 99/234 (42%), Gaps = 47/234 (20%)
Query: 10 KNVSASDFDIKRFIQQGNFGDIY--LVEEKQSHNTFVMKKVLREKMPNTIERD------I 61
K + AS I++ I G FG++ ++ V K L+ + RD I
Sbjct: 24 KEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASI 83
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYEL-- 119
M + P I++L V I EY+ G +L ++ RF + +L
Sbjct: 84 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSL--------DAFLRKNDGRFTVIQLVG 135
Query: 120 -----AQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFG---------SATQVDKNGR 165
++YL + VHRD+ N+L+++ K++DFG A + G+
Sbjct: 136 MLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGK 195
Query: 166 IKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
I P+ + APE + + + +T + D+WS G+V +E+++ G P+
Sbjct: 196 I----PI---RWTAPEAIAYRK-------FTSASDVWSYGIVMWEVMSYGERPY 235
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 72/169 (42%), Gaps = 35/169 (20%)
Query: 71 VNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSE--SKARFYIYELAQAVQYLHG 128
V + F+ H+ + E + + + EN G+L R Y++ ++V +LH
Sbjct: 80 VQMLEWFEHHGHICIVFELLGLSTYDFIKEN---GFLPFRLDHIRKMAYQICKSVNFLHS 136
Query: 129 LGYVHRDIKPDNMLLSATGH-------------------LKLTDFGSATQVDKNGRIKSI 169
H D+KP+N+L + + +K+ DFGSAT D++
Sbjct: 137 NKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHS---- 192
Query: 170 VPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
V Y APEV+ + G++ CD+WSIG + E G T F
Sbjct: 193 TLVXXRHYRAPEVILAL-------GWSQPCDVWSIGCILIEYYLGFTVF 234
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 99/234 (42%), Gaps = 47/234 (20%)
Query: 10 KNVSASDFDIKRFIQQGNFGDIYLVEEK--QSHNTFVMKKVLREKMPNTIERD------I 61
K + A++ I + + G FG++ K V K L+ RD I
Sbjct: 11 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 70
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYEL-- 119
M + P I+ L V + EY+ G +L + A+F + +L
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL--------DSFLRKHDAQFTVIQLVG 122
Query: 120 -----AQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFG---------SATQVDKNGR 165
A ++YL +GYVHRD+ N+L+++ K++DFG A + G+
Sbjct: 123 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 182
Query: 166 IKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
I P+ + +PE + + + +T + D+WS G+V +E+++ G P+
Sbjct: 183 I----PI---RWTSPEAIAYRK-------FTSASDVWSYGIVLWEVMSYGERPY 222
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 56/115 (48%), Gaps = 10/115 (8%)
Query: 105 GYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSA-TGHLKLTDFGSATQVDKN 163
G L E +R + ++ A+Q+ H G VHRDIK +N+L+ G KL DFGS +
Sbjct: 134 GPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDE 193
Query: 164 GRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
GT Y P EW+ H + +WS+G++ Y+++ G PF
Sbjct: 194 PYTDF---DGTRVYSPP---EWIS-RHQYHALPAT--VWSLGILLYDMVCGDIPF 239
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 114/257 (44%), Gaps = 50/257 (19%)
Query: 4 VKELRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTI----ER 59
+KE+ +KN++ + R + G FG++Y + N +V + +P E
Sbjct: 24 LKEVPRKNIT-----LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL 78
Query: 60 DIMVKSKCPYIVNLF----------YSFQDMNHVYFIMEYVTGGDFVTLL-ENQPHGYLS 108
D ++++ I++ F S Q + + +ME + GGD + L E +P
Sbjct: 79 DFLMEA---LIISKFNHQNIVRCIGVSLQSLPR-FILMELMAGGDLKSFLRETRPRPSQP 134
Query: 109 ESKARFYIYELAQ----AVQYLHGLGYVHRDIKPDNMLLSATGH---LKLTDFGSATQVD 161
S A + +A+ QYL ++HRDI N LL+ G K+ DFG A +
Sbjct: 135 SSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY 194
Query: 162 KNGRIK----SIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GST 216
+ + +++PV +++ PE +MEG +T D WS GV+ +E+ + G
Sbjct: 195 RASYYRKGGCAMLPV---KWMPPEA--FMEGI-----FTSKTDTWSFGVLLWEIFSLGYM 244
Query: 217 PF----NYETLDMTYSS 229
P+ N E L+ S
Sbjct: 245 PYPSKSNQEVLEFVTSG 261
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 38/225 (16%)
Query: 12 VSASDFDIKRFIQQGNFGDIYL-----VEEKQSHNTFVMKKV-----LREKMPNTIERDI 61
VS + R + QG+FG +Y + + ++ +K V LRE++ E +
Sbjct: 15 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASV 74
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLL-------ENQPHGYLSESKARF 114
M C ++V L +ME + GD + L EN P +
Sbjct: 75 MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI 134
Query: 115 YIY-ELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQV------DKNGRIK 167
+ E+A + YL+ +VHR++ N +++ +K+ DFG + K G K
Sbjct: 135 QMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGG--K 192
Query: 168 SIVPVGTPEYVAPEVLEWMEGNHGSDG-YTGSCDLWSIGVVSYEL 211
++PV ++APE L+ DG +T S D+WS GVV +E+
Sbjct: 193 GLLPV---RWMAPESLK--------DGVFTTSSDMWSFGVVLWEI 226
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 107/244 (43%), Gaps = 31/244 (12%)
Query: 10 KNVSASDFDIKRFIQQGNFGDIYLVEEK--QSHNTFVMKKVLREKMPNTIERD------I 61
K + S I++ I G FG++ K FV K L+ RD I
Sbjct: 28 KEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASI 87
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQ 121
M + P +++L V I E++ G + L Q G + + + +A
Sbjct: 88 MGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLR-QNDGQFTVIQLVGMLRGIAA 146
Query: 122 AVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKN-------GRIKSIVPVGT 174
++YL + YVHRD+ N+L+++ K++DFG + ++ + + +P+
Sbjct: 147 GMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPI-- 204
Query: 175 PEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPFNYETLDMTYSSILAC 233
+ APE +++ + +T + D+WS G+V +E+++ G P+ DMT ++
Sbjct: 205 -RWTAPEAIQYRK-------FTSASDVWSYGIVMWEVMSYGERPY----WDMTNQDVINA 252
Query: 234 DTED 237
+D
Sbjct: 253 IEQD 256
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 99/234 (42%), Gaps = 47/234 (20%)
Query: 10 KNVSASDFDIKRFIQQGNFGDIYLVEEK--QSHNTFVMKKVLREKMPNTIERD------I 61
K + A++ I + + G FG++ K V K L+ RD I
Sbjct: 28 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 87
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYEL-- 119
M + P I+ L V + EY+ G +L + A+F + +L
Sbjct: 88 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL--------DSFLRKHDAQFTVIQLVG 139
Query: 120 -----AQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFG---------SATQVDKNGR 165
A ++YL +GYVHRD+ N+L+++ K++DFG A + G+
Sbjct: 140 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 199
Query: 166 IKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
I P+ + +PE + + + +T + D+WS G+V +E+++ G P+
Sbjct: 200 I----PI---RWTSPEAIAYRK-------FTSASDVWSYGIVLWEVMSYGERPY 239
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 38/225 (16%)
Query: 12 VSASDFDIKRFIQQGNFGDIYL-----VEEKQSHNTFVMKKV-----LREKMPNTIERDI 61
VS + R + QG+FG +Y + + ++ +K V LRE++ E +
Sbjct: 14 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASV 73
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLL-------ENQPHGYLSESKARF 114
M C ++V L +ME + GD + L EN P +
Sbjct: 74 MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI 133
Query: 115 YIY-ELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQV------DKNGRIK 167
+ E+A + YL+ +VHR++ N +++ +K+ DFG + K G K
Sbjct: 134 QMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGG--K 191
Query: 168 SIVPVGTPEYVAPEVLEWMEGNHGSDG-YTGSCDLWSIGVVSYEL 211
++PV ++APE L+ DG +T S D+WS GVV +E+
Sbjct: 192 GLLPV---RWMAPESLK--------DGVFTTSSDMWSFGVVLWEI 225
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 99/234 (42%), Gaps = 47/234 (20%)
Query: 10 KNVSASDFDIKRFIQQGNFGDIYLVEEK--QSHNTFVMKKVLREKMPNTIERD------I 61
K + A++ I + + G FG++ K V K L+ RD I
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYEL-- 119
M + P I+ L V + EY+ G +L + A+F + +L
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL--------DSFLRKHDAQFTVIQLVG 151
Query: 120 -----AQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFG---------SATQVDKNGR 165
A ++YL +GYVHRD+ N+L+++ K++DFG A + G+
Sbjct: 152 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 166 IKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
I P+ + +PE + + + +T + D+WS G+V +E+++ G P+
Sbjct: 212 I----PI---RWTSPEAIAYRK-------FTSASDVWSYGIVLWEVMSYGERPY 251
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 99/234 (42%), Gaps = 47/234 (20%)
Query: 10 KNVSASDFDIKRFIQQGNFGDIYLVEEK--QSHNTFVMKKVLREKMPNTIERD------I 61
K + A++ I + + G FG++ K V K L+ RD I
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYEL-- 119
M + P I+ L V + EY+ G +L + A+F + +L
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL--------DSFLRKHDAQFTVIQLVG 151
Query: 120 -----AQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFG---------SATQVDKNGR 165
A ++YL +GYVHRD+ N+L+++ K++DFG A + G+
Sbjct: 152 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 166 IKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
I P+ + +PE + + + +T + D+WS G+V +E+++ G P+
Sbjct: 212 I----PI---RWTSPEAIAYRK-------FTSASDVWSYGIVLWEVMSYGERPY 251
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 99/234 (42%), Gaps = 47/234 (20%)
Query: 10 KNVSASDFDIKRFIQQGNFGDIYLVEEK--QSHNTFVMKKVLREKMPNTIERD------I 61
K + A++ I + + G FG++ K V K L+ RD I
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYEL-- 119
M + P I+ L V + EY+ G +L + A+F + +L
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL--------DSFLRKHDAQFTVIQLVG 151
Query: 120 -----AQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFG---------SATQVDKNGR 165
A ++YL +GYVHRD+ N+L+++ K++DFG A + G+
Sbjct: 152 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 166 IKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
I P+ + +PE + + + +T + D+WS G+V +E+++ G P+
Sbjct: 212 I----PI---RWTSPEAIAYRK-------FTSASDVWSYGIVLWEVMSYGERPY 251
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 99/234 (42%), Gaps = 47/234 (20%)
Query: 10 KNVSASDFDIKRFIQQGNFGDIYLVEEK--QSHNTFVMKKVLREKMPNTIERD------I 61
K + A++ I + + G FG++ K V K L+ RD I
Sbjct: 38 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 97
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYEL-- 119
M + P I+ L V + EY+ G +L + A+F + +L
Sbjct: 98 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL--------DSFLRKHDAQFTVIQLVG 149
Query: 120 -----AQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFG---------SATQVDKNGR 165
A ++YL +GYVHRD+ N+L+++ K++DFG A + G+
Sbjct: 150 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 209
Query: 166 IKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
I P+ + +PE + + + +T + D+WS G+V +E+++ G P+
Sbjct: 210 I----PI---RWTSPEAIAYRK-------FTSASDVWSYGIVLWEVMSYGERPY 249
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 99/234 (42%), Gaps = 47/234 (20%)
Query: 10 KNVSASDFDIKRFIQQGNFGDIYLVEEK--QSHNTFVMKKVLREKMPNTIERD------I 61
K + A++ I + + G FG++ K V K L+ RD I
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYEL-- 119
M + P I+ L V + EY+ G +L + A+F + +L
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL--------DSFLRKHDAQFTVIQLVG 151
Query: 120 -----AQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFG---------SATQVDKNGR 165
A ++YL +GYVHRD+ N+L+++ K++DFG A + G+
Sbjct: 152 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGK 211
Query: 166 IKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
I P+ + +PE + + + +T + D+WS G+V +E+++ G P+
Sbjct: 212 I----PI---RWTSPEAIAYRK-------FTSASDVWSYGIVLWEVMSYGERPY 251
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 99/234 (42%), Gaps = 47/234 (20%)
Query: 10 KNVSASDFDIKRFIQQGNFGDIYLVEEK--QSHNTFVMKKVLREKMPNTIERD------I 61
K + A++ I + + G FG++ K V K L+ RD I
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYEL-- 119
M + P I+ L V + EY+ G +L + A+F + +L
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL--------DSFLRKHDAQFTVIQLVG 151
Query: 120 -----AQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFG---------SATQVDKNGR 165
A ++YL +GYVHRD+ N+L+++ K++DFG A + G+
Sbjct: 152 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 166 IKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
I P+ + +PE + + + +T + D+WS G+V +E+++ G P+
Sbjct: 212 I----PI---RWTSPEAIAYRK-------FTSASDVWSYGIVLWEVMSYGERPY 251
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 64/132 (48%), Gaps = 12/132 (9%)
Query: 85 FIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLS 144
+MEY+ G L+ L S+ Y ++ + ++YL VHRD+ N+L+
Sbjct: 87 LVMEYLPSGCLRDFLQRH-RARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVE 145
Query: 145 ATGHLKLTDFGSA--TQVDKNGRIKSIVPVGTPEY-VAPEVLEWMEGNHGSDGYTGSCDL 201
+ H+K+ DFG A +DK+ + P +P + APE L + ++ D+
Sbjct: 146 SEAHVKIADFGLAKLLPLDKDXXVVR-EPGQSPIFWYAPESLS-------DNIFSRQSDV 197
Query: 202 WSIGVVSYELLT 213
WS GVV YEL T
Sbjct: 198 WSFGVVLYELFT 209
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 77/155 (49%), Gaps = 16/155 (10%)
Query: 69 YIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHG 128
YIV+L F NH+ + E ++ + LL N +S + R + ++ A+ +L
Sbjct: 98 YIVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLAT 156
Query: 129 --LGYVHRDIKPDNMLLSAT--GHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLE 184
L +H D+KP+N+LL +K+ DFGS+ Q+ + RI + + Y +PEVL
Sbjct: 157 PELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ--RIYQXIQ--SRFYRSPEVLL 212
Query: 185 WMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFN 219
M Y + D+WS+G + E+ TG F+
Sbjct: 213 GMP-------YDLAIDMWSLGCILVEMHTGEPLFS 240
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 99/234 (42%), Gaps = 47/234 (20%)
Query: 10 KNVSASDFDIKRFIQQGNFGDIYLVEEK--QSHNTFVMKKVLREKMPNTIERD------I 61
K + A++ I + + G FG++ K V K L+ RD I
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYEL-- 119
M + P I+ L V + EY+ G +L + A+F + +L
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL--------DSFLRKHDAQFTVIQLVG 151
Query: 120 -----AQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFG---------SATQVDKNGR 165
A ++YL +GYVHRD+ N+L+++ K++DFG A + G+
Sbjct: 152 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGK 211
Query: 166 IKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
I P+ + +PE + + + +T + D+WS G+V +E+++ G P+
Sbjct: 212 I----PI---RWTSPEAIAYRK-------FTSASDVWSYGIVLWEVMSYGERPY 251
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 78/172 (45%), Gaps = 24/172 (13%)
Query: 113 RFYIYELAQAVQYLHGLG--YVHRDIKPDNMLLSA-TGHLKLTDFGSATQVDKNGRIKSI 169
R + ++ + +Q+LH +HRD+K DN+ ++ TG +K+ D G AT + + K++
Sbjct: 132 RSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT-LKRASFAKAV 190
Query: 170 VPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF----NYETLDM 225
+ GTPE+ APE E + Y S D+++ G E T P+ N +
Sbjct: 191 I--GTPEFXAPEXYE--------EKYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYR 240
Query: 226 TYSSILACDTEDTVSFPSSIRLSTAMVNFVQSLVQKLDARLNMDQVLGHPVF 277
+S + + D V+ P + + Q D R ++ +L H F
Sbjct: 241 RVTSGVKPASFDKVAIPEVKEIIEGCIR------QNKDERYSIKDLLNHAFF 286
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 114/257 (44%), Gaps = 50/257 (19%)
Query: 4 VKELRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTI----ER 59
+KE+ +KN++ + R + G FG++Y + N +V + +P E
Sbjct: 51 LKEVPRKNIT-----LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL 105
Query: 60 DIMVKSKCPYIVNLF----------YSFQDMNHVYFIMEYVTGGDFVTLL-ENQPHGYLS 108
D ++++ I++ F S Q + + ++E + GGD + L E +P
Sbjct: 106 DFLMEA---LIISKFNHQNIVRCIGVSLQSLPR-FILLELMAGGDLKSFLRETRPRPSQP 161
Query: 109 ESKARFYIYELAQ----AVQYLHGLGYVHRDIKPDNMLLSATGH---LKLTDFGSATQVD 161
S A + +A+ QYL ++HRDI N LL+ G K+ DFG A +
Sbjct: 162 SSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY 221
Query: 162 KNGRIK----SIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GST 216
+ + +++PV +++ PE +MEG +T D WS GV+ +E+ + G
Sbjct: 222 RASYYRKGGCAMLPV---KWMPPEA--FMEGI-----FTSKTDTWSFGVLLWEIFSLGYM 271
Query: 217 PF----NYETLDMTYSS 229
P+ N E L+ S
Sbjct: 272 PYPSKSNQEVLEFVTSG 288
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 77/155 (49%), Gaps = 16/155 (10%)
Query: 69 YIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHG 128
YIV+L F NH+ + E ++ + LL N +S + R + ++ A+ +L
Sbjct: 117 YIVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLAT 175
Query: 129 --LGYVHRDIKPDNMLLSAT--GHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLE 184
L +H D+KP+N+LL +K+ DFGS+ Q+ + RI + + Y +PEVL
Sbjct: 176 PELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ--RIYQXIQ--SRFYRSPEVLL 231
Query: 185 WMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFN 219
M Y + D+WS+G + E+ TG F+
Sbjct: 232 GMP-------YDLAIDMWSLGCILVEMHTGEPLFS 259
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 114/257 (44%), Gaps = 50/257 (19%)
Query: 4 VKELRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTI----ER 59
+KE+ +KN++ + R + G FG++Y + N +V + +P E
Sbjct: 39 LKEVPRKNIT-----LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL 93
Query: 60 DIMVKSKCPYIVNLF----------YSFQDMNHVYFIMEYVTGGDFVTLL-ENQPHGYLS 108
D ++++ I++ F S Q + + +ME + GGD + L E +P
Sbjct: 94 DFLMEA---LIISKFNHQNIVRCIGVSLQSLPR-FILMELMAGGDLKSFLRETRPRPSQP 149
Query: 109 ESKARFYIYELAQ----AVQYLHGLGYVHRDIKPDNMLLSATGH---LKLTDFGSATQVD 161
S A + +A+ QYL ++HRDI N LL+ G K+ DFG A +
Sbjct: 150 SSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY 209
Query: 162 KNGRIK----SIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GST 216
+ + +++PV +++ PE +MEG +T D WS GV+ +E+ + G
Sbjct: 210 RASYYRKGGCAMLPV---KWMPPEA--FMEGI-----FTSKTDTWSFGVLLWEIFSLGYM 259
Query: 217 PF----NYETLDMTYSS 229
P+ N E L+ S
Sbjct: 260 PYPSKSNQEVLEFVTSG 276
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 77/155 (49%), Gaps = 16/155 (10%)
Query: 69 YIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHG 128
YIV+L F NH+ + E ++ + LL N +S + R + ++ A+ +L
Sbjct: 117 YIVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLAT 175
Query: 129 --LGYVHRDIKPDNMLLSATGH--LKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLE 184
L +H D+KP+N+LL +K+ DFGS+ Q+ + RI + + Y +PEVL
Sbjct: 176 PELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQ--RIYQXIQ--SRFYRSPEVLL 231
Query: 185 WMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFN 219
M Y + D+WS+G + E+ TG F+
Sbjct: 232 GMP-------YDLAIDMWSLGCILVEMHTGEPLFS 259
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 114/257 (44%), Gaps = 50/257 (19%)
Query: 4 VKELRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTI----ER 59
+KE+ +KN++ + R + G FG++Y + N +V + +P E
Sbjct: 41 LKEVPRKNIT-----LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL 95
Query: 60 DIMVKSKCPYIVNLF----------YSFQDMNHVYFIMEYVTGGDFVTLL-ENQPHGYLS 108
D ++++ I++ F S Q + + ++E + GGD + L E +P
Sbjct: 96 DFLMEA---LIISKFNHQNIVRCIGVSLQSLPR-FILLELMAGGDLKSFLRETRPRPSQP 151
Query: 109 ESKARFYIYELAQ----AVQYLHGLGYVHRDIKPDNMLLSATGH---LKLTDFGSATQVD 161
S A + +A+ QYL ++HRDI N LL+ G K+ DFG A +
Sbjct: 152 SSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY 211
Query: 162 KNGRIK----SIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GST 216
+ + +++PV +++ PE +MEG +T D WS GV+ +E+ + G
Sbjct: 212 RASYYRKGGCAMLPV---KWMPPEA--FMEGI-----FTSKTDTWSFGVLLWEIFSLGYM 261
Query: 217 PF----NYETLDMTYSS 229
P+ N E L+ S
Sbjct: 262 PYPSKSNQEVLEFVTSG 278
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 17/123 (13%)
Query: 115 YIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGT 174
Y +++A+ +++L +HRD+ N+LLS +K+ DFG A + KN
Sbjct: 204 YSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKN----------- 252
Query: 175 PEYVAPE----VLEWMEGNHGSDG-YTGSCDLWSIGVVSYELLT-GSTPFNYETLDMTYS 228
P+YV L+WM D Y+ D+WS GV+ +E+ + G +P+ +D +
Sbjct: 253 PDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFC 312
Query: 229 SIL 231
S L
Sbjct: 313 SRL 315
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 61/134 (45%), Gaps = 16/134 (11%)
Query: 85 FIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLS 144
+MEY+ G L+ L S+ Y ++ + ++YL VHRD+ N+L+
Sbjct: 90 LVMEYLPSGCLRDFLQRH-RARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVE 148
Query: 145 ATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPE----VLEWMEGNHGSDG-YTGSC 199
+ H+K+ DFG A ++P+ YV E + W SD ++
Sbjct: 149 SEAHVKIADFGLAK----------LLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQS 198
Query: 200 DLWSIGVVSYELLT 213
D+WS GVV YEL T
Sbjct: 199 DVWSFGVVLYELFT 212
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 114/257 (44%), Gaps = 50/257 (19%)
Query: 4 VKELRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTI----ER 59
+KE+ +KN++ + R + G FG++Y + N +V + +P E
Sbjct: 25 LKEVPRKNIT-----LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL 79
Query: 60 DIMVKSKCPYIVNLF----------YSFQDMNHVYFIMEYVTGGDFVTLL-ENQPHGYLS 108
D ++++ I++ F S Q + + ++E + GGD + L E +P
Sbjct: 80 DFLMEA---LIISKFNHQNIVRCIGVSLQSLPR-FILLELMAGGDLKSFLRETRPRPSQP 135
Query: 109 ESKARFYIYELAQ----AVQYLHGLGYVHRDIKPDNMLLSATGH---LKLTDFGSATQVD 161
S A + +A+ QYL ++HRDI N LL+ G K+ DFG A +
Sbjct: 136 SSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIY 195
Query: 162 KNGRIK----SIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GST 216
+ + +++PV +++ PE +MEG +T D WS GV+ +E+ + G
Sbjct: 196 RASYYRKGGCAMLPV---KWMPPEA--FMEGI-----FTSKTDTWSFGVLLWEIFSLGYM 245
Query: 217 PF----NYETLDMTYSS 229
P+ N E L+ S
Sbjct: 246 PYPSKSNQEVLEFVTSG 262
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 114/257 (44%), Gaps = 50/257 (19%)
Query: 4 VKELRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTI----ER 59
+KE+ +KN++ + R + G FG++Y + N +V + +P E
Sbjct: 31 LKEVPRKNIT-----LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL 85
Query: 60 DIMVKSKCPYIVNLF----------YSFQDMNHVYFIMEYVTGGDFVTLL-ENQPHGYLS 108
D ++++ I++ F S Q + + ++E + GGD + L E +P
Sbjct: 86 DFLMEA---LIISKFNHQNIVRCIGVSLQSLPR-FILLELMAGGDLKSFLRETRPRPSQP 141
Query: 109 ESKARFYIYELAQ----AVQYLHGLGYVHRDIKPDNMLLSATGH---LKLTDFGSATQVD 161
S A + +A+ QYL ++HRDI N LL+ G K+ DFG A +
Sbjct: 142 SSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY 201
Query: 162 KNGRIK----SIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GST 216
+ + +++PV +++ PE +MEG +T D WS GV+ +E+ + G
Sbjct: 202 RASYYRKGGCAMLPV---KWMPPEA--FMEGI-----FTSKTDTWSFGVLLWEIFSLGYM 251
Query: 217 PF----NYETLDMTYSS 229
P+ N E L+ S
Sbjct: 252 PYPSKSNQEVLEFVTSG 268
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 114/257 (44%), Gaps = 50/257 (19%)
Query: 4 VKELRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTI----ER 59
+KE+ +KN++ + R + G FG++Y + N +V + +P E
Sbjct: 25 LKEVPRKNIT-----LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL 79
Query: 60 DIMVKSKCPYIVNLF----------YSFQDMNHVYFIMEYVTGGDFVTLL-ENQPHGYLS 108
D ++++ I++ F S Q + + ++E + GGD + L E +P
Sbjct: 80 DFLMEA---LIISKFNHQNIVRCIGVSLQSLPR-FILLELMAGGDLKSFLRETRPRPSQP 135
Query: 109 ESKARFYIYELAQ----AVQYLHGLGYVHRDIKPDNMLLSATGH---LKLTDFGSATQVD 161
S A + +A+ QYL ++HRDI N LL+ G K+ DFG A +
Sbjct: 136 SSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY 195
Query: 162 KNGRIK----SIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GST 216
+ + +++PV +++ PE +MEG +T D WS GV+ +E+ + G
Sbjct: 196 RASYYRKGGCAMLPV---KWMPPEA--FMEGI-----FTSKTDTWSFGVLLWEIFSLGYM 245
Query: 217 PF----NYETLDMTYSS 229
P+ N E L+ S
Sbjct: 246 PYPSKSNQEVLEFVTSG 262
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 115/261 (44%), Gaps = 44/261 (16%)
Query: 4 VKELRQKNVSASDFDIKRFIQQGNFGDIYLVEE----KQSHNTFVMKKVLREKMPNTI-- 57
V+ +++ N+ +KR + +G FG ++L E + V K L++ N
Sbjct: 7 VQHIKRHNIV-----LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKD 61
Query: 58 ---ERDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDF-----------VTLLENQP 103
E +++ + +IV + + + + + EY+ GD V + E P
Sbjct: 62 FHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNP 121
Query: 104 HGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKN 163
L++S+ ++A + YL +VHRD+ N L+ +K+ DFG + V
Sbjct: 122 PTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYST 181
Query: 164 GRIK----SIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
+ +++P+ ++ PE + + + +T D+WS+GVV +E+ T G P+
Sbjct: 182 DYYRVGGHTMLPI---RWMPPESIMYRK-------FTTESDVWSLGVVLWEIFTYGKQPW 231
Query: 219 NYETLDMTYSSILACDTEDTV 239
++ + ++ C T+ V
Sbjct: 232 ----YQLSNNEVIECITQGRV 248
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 114/257 (44%), Gaps = 50/257 (19%)
Query: 4 VKELRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTI----ER 59
+KE+ +KN++ + R + G FG++Y + N +V + +P E
Sbjct: 24 LKEVPRKNIT-----LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL 78
Query: 60 DIMVKSKCPYIVNLF----------YSFQDMNHVYFIMEYVTGGDFVTLL-ENQPHGYLS 108
D ++++ I++ F S Q + + ++E + GGD + L E +P
Sbjct: 79 DFLMEA---LIISKFNHQNIVRCIGVSLQSLPR-FILLELMAGGDLKSFLRETRPRPSQP 134
Query: 109 ESKARFYIYELAQ----AVQYLHGLGYVHRDIKPDNMLLSATGH---LKLTDFGSATQVD 161
S A + +A+ QYL ++HRDI N LL+ G K+ DFG A +
Sbjct: 135 SSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY 194
Query: 162 KNGRIK----SIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GST 216
+ + +++PV +++ PE +MEG +T D WS GV+ +E+ + G
Sbjct: 195 RASYYRKGGCAMLPV---KWMPPEA--FMEGI-----FTSKTDTWSFGVLLWEIFSLGYM 244
Query: 217 PF----NYETLDMTYSS 229
P+ N E L+ S
Sbjct: 245 PYPSKSNQEVLEFVTSG 261
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 78/179 (43%), Gaps = 25/179 (13%)
Query: 118 ELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLK-------------LTDFGSATQVDKNG 164
++A V +LH L +HRD+KP N+L+S + ++DFG ++D
Sbjct: 141 QIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQ 200
Query: 165 ---RIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPFN- 219
R P GT + APE+LE T S D++S+G V Y +L+ G PF
Sbjct: 201 XXFRXNLNNPSGTSGWRAPELLE----ESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD 256
Query: 220 -YETLDMTYSSILACDTEDTVSFPSSIRLSTAMVNFVQSLVQKLDARLNMDQVLGHPVF 277
Y I + D + S I +T +++ Q + R +VL HP+F
Sbjct: 257 KYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLIS--QMIDHDPLKRPTAMKVLRHPLF 313
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 78/179 (43%), Gaps = 25/179 (13%)
Query: 118 ELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLK-------------LTDFGSATQVDKNG 164
++A V +LH L +HRD+KP N+L+S + ++DFG ++D
Sbjct: 141 QIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQ 200
Query: 165 ---RIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPFN- 219
R P GT + APE+LE T S D++S+G V Y +L+ G PF
Sbjct: 201 XXFRXNLNNPSGTSGWRAPELLE----ESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD 256
Query: 220 -YETLDMTYSSILACDTEDTVSFPSSIRLSTAMVNFVQSLVQKLDARLNMDQVLGHPVF 277
Y I + D + S I +T +++ Q + R +VL HP+F
Sbjct: 257 KYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLIS--QMIDHDPLKRPTAMKVLRHPLF 313
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 94/211 (44%), Gaps = 17/211 (8%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP---NTIERDIMVKSKCPYIV 71
+D +K + G FG++Y K+ T +K + + M E +M + K P +V
Sbjct: 11 TDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 70
Query: 72 NLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGY 131
L Y I E++T G+ + L +S + +++ A++YL +
Sbjct: 71 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 130
Query: 132 VHRDIKPDNMLLSATGHLKLTDFGSA---TQVDKNGRIKSIVPVGTPEYVAPEVLEWMEG 188
+HRD+ N L+ +K+ DFG + T + P+ ++ APE L +
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI---KWTAPESLAY--- 184
Query: 189 NHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
+ ++ D+W+ GV+ +E+ T G +P+
Sbjct: 185 ----NKFSIKSDVWAFGVLLWEIATYGMSPY 211
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 95/221 (42%), Gaps = 18/221 (8%)
Query: 9 QKNVSASDFDIKRFIQQGNFGDIY---LVEEKQSHNTFVMKKV-----LREKMPNTIERD 60
Q ++ D + R + +G FG++Y K +K L K E
Sbjct: 2 QYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAV 61
Query: 61 IMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELA 120
IM P+IV L ++ + IME G+ LE + L Y ++
Sbjct: 62 IMKNLDHPHIVKLIGIIEE-EPTWIIMELYPYGELGHYLERNKNS-LKVLTLVLYSLQIC 119
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAP 180
+A+ YL + VHRDI N+L+++ +KL DFG + ++ K+ V ++++P
Sbjct: 120 KAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSP 179
Query: 181 EVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPFNY 220
E + + +T + D+W V +E+L+ G PF +
Sbjct: 180 ESINFRR-------FTTASDVWMFAVCMWEILSFGKQPFFW 213
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 95/221 (42%), Gaps = 18/221 (8%)
Query: 9 QKNVSASDFDIKRFIQQGNFGDIY---LVEEKQSHNTFVMKKV-----LREKMPNTIERD 60
Q ++ D + R + +G FG++Y K +K L K E
Sbjct: 18 QYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAV 77
Query: 61 IMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELA 120
IM P+IV L ++ + IME G+ LE + L Y ++
Sbjct: 78 IMKNLDHPHIVKLIGIIEE-EPTWIIMELYPYGELGHYLERNKNS-LKVLTLVLYSLQIC 135
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAP 180
+A+ YL + VHRDI N+L+++ +KL DFG + ++ K+ V ++++P
Sbjct: 136 KAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSP 195
Query: 181 EVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPFNY 220
E + + +T + D+W V +E+L+ G PF +
Sbjct: 196 ESINFRR-------FTTASDVWMFAVCMWEILSFGKQPFFW 229
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 99/234 (42%), Gaps = 47/234 (20%)
Query: 10 KNVSASDFDIKRFIQQGNFGDIYLVEEK--QSHNTFVMKKVLREKMPNTIERD------I 61
K + A++ I + + G FG++ K V K L+ RD I
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYEL-- 119
M + P I+ L V + EY+ G +L + A+F + +L
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL--------DSFLRKHDAQFTVIQLVG 151
Query: 120 -----AQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFG---------SATQVDKNGR 165
A ++YL +G+VHRD+ N+L+++ K++DFG A + G+
Sbjct: 152 MLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 166 IKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
I P+ + +PE + + + +T + D+WS G+V +E+++ G P+
Sbjct: 212 I----PI---RWTSPEAIAYRK-------FTSASDVWSYGIVLWEVMSYGERPY 251
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 61/134 (45%), Gaps = 16/134 (11%)
Query: 85 FIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLS 144
+MEY+ G L+ L S+ Y ++ + ++YL VHRD+ N+L+
Sbjct: 91 LVMEYLPSGCLRDFLQRH-RARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVE 149
Query: 145 ATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPE----VLEWMEGNHGSDG-YTGSC 199
+ H+K+ DFG A ++P+ YV E + W SD ++
Sbjct: 150 SEAHVKIADFGLAK----------LLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQS 199
Query: 200 DLWSIGVVSYELLT 213
D+WS GVV YEL T
Sbjct: 200 DVWSFGVVLYELFT 213
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 61/134 (45%), Gaps = 16/134 (11%)
Query: 85 FIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLS 144
+MEY+ G L+ L S+ Y ++ + ++YL VHRD+ N+L+
Sbjct: 103 LVMEYLPSGCLRDFLQRH-RARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVE 161
Query: 145 ATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPE----VLEWMEGNHGSDG-YTGSC 199
+ H+K+ DFG A ++P+ YV E + W SD ++
Sbjct: 162 SEAHVKIADFGLAK----------LLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQS 211
Query: 200 DLWSIGVVSYELLT 213
D+WS GVV YEL T
Sbjct: 212 DVWSFGVVLYELFT 225
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 96/219 (43%), Gaps = 38/219 (17%)
Query: 21 RFIQQGNFGDIY---LVEEKQSHNTFVMKKVLREKMPNTIERDI------MVKSKCPYIV 71
+ + G FG +Y + + ++ V KVLRE ++I M PY+
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 72 NLFYSF--QDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGL 129
L + V +M Y D V EN+ G L + ++A+ + YL +
Sbjct: 83 RLLGICLTSTVQLVTQLMPYGCLLDHVR--ENR--GRLGSQDLLNWCMQIAKGMSYLEDV 138
Query: 130 GYVHRDIKPDNMLLSATGHLKLTDFGSATQVD--------KNGRIKSIVPVGTPEYVAPE 181
VHRD+ N+L+ + H+K+TDFG A +D G+ VP+ +++A E
Sbjct: 139 RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGK----VPI---KWMALE 191
Query: 182 VLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPFN 219
+ H S D+WS GV +EL+T G+ P++
Sbjct: 192 SILRRRFTHQS-------DVWSYGVTVWELMTFGAKPYD 223
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 114/257 (44%), Gaps = 50/257 (19%)
Query: 4 VKELRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTI----ER 59
+KE+ +KN++ + R + G FG++Y + N +V + +P E
Sbjct: 16 LKEVPRKNIT-----LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL 70
Query: 60 DIMVKSKCPYIVNLF----------YSFQDMNHVYFIMEYVTGGDFVTLL-ENQPHGYLS 108
D ++++ I++ F S Q + + ++E + GGD + L E +P
Sbjct: 71 DFLMEA---LIISKFNHQNIVRCIGVSLQSLPR-FILLELMAGGDLKSFLRETRPRPSQP 126
Query: 109 ESKARFYIYELAQ----AVQYLHGLGYVHRDIKPDNMLLSATGH---LKLTDFGSATQVD 161
S A + +A+ QYL ++HRDI N LL+ G K+ DFG A +
Sbjct: 127 SSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY 186
Query: 162 KNGRIK----SIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GST 216
+ + +++PV +++ PE +MEG +T D WS GV+ +E+ + G
Sbjct: 187 RASYYRKGGCAMLPV---KWMPPEA--FMEGI-----FTSKTDTWSFGVLLWEIFSLGYM 236
Query: 217 PF----NYETLDMTYSS 229
P+ N E L+ S
Sbjct: 237 PYPSKSNQEVLEFVTSG 253
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 95/221 (42%), Gaps = 18/221 (8%)
Query: 9 QKNVSASDFDIKRFIQQGNFGDIY---LVEEKQSHNTFVMKKV-----LREKMPNTIERD 60
Q ++ D + R + +G FG++Y K +K L K E
Sbjct: 6 QYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAV 65
Query: 61 IMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELA 120
IM P+IV L ++ + IME G+ LE + L Y ++
Sbjct: 66 IMKNLDHPHIVKLIGIIEE-EPTWIIMELYPYGELGHYLERNKNS-LKVLTLVLYSLQIC 123
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAP 180
+A+ YL + VHRDI N+L+++ +KL DFG + ++ K+ V ++++P
Sbjct: 124 KAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSP 183
Query: 181 EVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPFNY 220
E + + +T + D+W V +E+L+ G PF +
Sbjct: 184 ESINFRR-------FTTASDVWMFAVCMWEILSFGKQPFFW 217
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 64/161 (39%), Gaps = 31/161 (19%)
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
F H+ E + F L EN Y R Y+L A+++LH H D+
Sbjct: 100 FNFHGHMCIAFELLGKNTFEFLKENNFQPY-PLPHVRHMAYQLCHALRFLHENQLTHTDL 158
Query: 137 KPDNMLLSAT-------------------GHLKLTDFGSATQVDKNGRIKSIVPVGTPEY 177
KP+N+L + +++ DFGSAT ++ V T Y
Sbjct: 159 KPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEH----HTTIVATRHY 214
Query: 178 VAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
PEV+ + G+ CD+WSIG + +E G T F
Sbjct: 215 RPPEVILEL-------GWAQPCDVWSIGCILFEYYRGFTLF 248
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 64/161 (39%), Gaps = 31/161 (19%)
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
F H+ E + F L EN Y R Y+L A+++LH H D+
Sbjct: 91 FNFHGHMCIAFELLGKNTFEFLKENNFQPY-PLPHVRHMAYQLCHALRFLHENQLTHTDL 149
Query: 137 KPDNMLLSAT-------------------GHLKLTDFGSATQVDKNGRIKSIVPVGTPEY 177
KP+N+L + +++ DFGSAT ++ V T Y
Sbjct: 150 KPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEH----HTTIVATRHY 205
Query: 178 VAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
PEV+ + G+ CD+WSIG + +E G T F
Sbjct: 206 RPPEVILEL-------GWAQPCDVWSIGCILFEYYRGFTLF 239
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 113/254 (44%), Gaps = 44/254 (17%)
Query: 4 VKELRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTI----ER 59
+KE+ +KN++ + R + G FG++Y + N +V + +P E
Sbjct: 25 LKEVPRKNIT-----LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL 79
Query: 60 DIMVKSKCPYIVN-------LFYSFQDMNHVYFIMEYVTGGDFVTLL-ENQPHGYLSESK 111
D ++++ +N + S Q + + ++E + GGD + L E +P S
Sbjct: 80 DFLMEALIISKLNHQNIVRCIGVSLQSLPR-FILLELMAGGDLKSFLRETRPRPSQPSSL 138
Query: 112 ARFYIYELAQ----AVQYLHGLGYVHRDIKPDNMLLSATGH---LKLTDFGSATQVDKNG 164
A + +A+ QYL ++HRDI N LL+ G K+ DFG A + +
Sbjct: 139 AMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAS 198
Query: 165 RIK----SIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF- 218
+ +++PV +++ PE +MEG +T D WS GV+ +E+ + G P+
Sbjct: 199 YYRKGGCAMLPV---KWMPPEA--FMEGI-----FTSKTDTWSFGVLLWEIFSLGYMPYP 248
Query: 219 ---NYETLDMTYSS 229
N E L+ S
Sbjct: 249 SKSNQEVLEFVTSG 262
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 92/227 (40%), Gaps = 33/227 (14%)
Query: 10 KNVSASDFDIKRFIQQGNFGDIYL--VEEKQSHNTFVMKKVLREKMPNTIERD------I 61
+ + AS I++ I G+ G++ + + V K L+ RD I
Sbjct: 44 REIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASI 103
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQ 121
M + P I+ L + EY+ G T L G + + + +
Sbjct: 104 MGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTH-DGQFTIMQLVGMLRGVGA 162
Query: 122 AVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFG---------SATQVDKNGRIKSIVPV 172
++YL LGYVHRD+ N+L+ + K++DFG A G+I P+
Sbjct: 163 GMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKI----PI 218
Query: 173 GTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
+ APE + + ++ + D+WS GVV +E+L G P+
Sbjct: 219 ---RWTAPEAIAFRT-------FSSASDVWSFGVVMWEVLAYGERPY 255
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 44/181 (24%)
Query: 106 YLSESKARFYIYEL-------AQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFG--- 155
+L E F + +L A ++YL + YVHRD+ N+L+++ K++DFG
Sbjct: 136 FLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSR 195
Query: 156 ------SATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSY 209
AT G+I P+ + APE + + + +T + D+WS G+V +
Sbjct: 196 VLEDDPEATYTTSGGKI----PI---RWTAPEAISYRK-------FTSASDVWSFGIVMW 241
Query: 210 ELLT-GSTPF----NYETLDMTYSSILACDTEDTVSFPSSIRLSTAMVNFVQSLVQKLDA 264
E++T G P+ N+E + D P+ + +A+ + Q+ A
Sbjct: 242 EVMTYGERPYWELSNHEVMKA---------INDGFRLPTPMDCPSAIYQLMMQCWQQERA 292
Query: 265 R 265
R
Sbjct: 293 R 293
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 64/131 (48%), Gaps = 12/131 (9%)
Query: 85 FIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLS 144
+MEYV G +L + P + ++ + ++ + + YLH Y+HRD+ N+LL
Sbjct: 112 LVMEYVPLG---SLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLD 168
Query: 145 ATGHLKLTDFGSATQVDKNGRIKSIVPVG-TPEY-VAPEVLEWMEGNHGSDGYTGSCDLW 202
+K+ DFG A V + + G +P + APE L+ + + S D+W
Sbjct: 169 NDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYAS-------DVW 221
Query: 203 SIGVVSYELLT 213
S GV YELLT
Sbjct: 222 SFGVTLYELLT 232
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 64/161 (39%), Gaps = 31/161 (19%)
Query: 77 FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDI 136
F H+ E + F L EN Y R Y+L A+++LH H D+
Sbjct: 123 FNFHGHMCIAFELLGKNTFEFLKENNFQPY-PLPHVRHMAYQLCHALRFLHENQLTHTDL 181
Query: 137 KPDNMLLSAT-------------------GHLKLTDFGSATQVDKNGRIKSIVPVGTPEY 177
KP+N+L + +++ DFGSAT ++ V T Y
Sbjct: 182 KPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEH----HTTIVATRHY 237
Query: 178 VAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
PEV+ + G+ CD+WSIG + +E G T F
Sbjct: 238 RPPEVILEL-------GWAQPCDVWSIGCILFEYYRGFTLF 271
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 106/244 (43%), Gaps = 31/244 (12%)
Query: 10 KNVSASDFDIKRFIQQGNFGDIYLVEEK--QSHNTFVMKKVLREKMPNTIERD------I 61
K + S I++ I G FG++ K FV K L+ RD I
Sbjct: 2 KEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASI 61
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQ 121
M + P +++L V I E++ G + L Q G + + + +A
Sbjct: 62 MGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLR-QNDGQFTVIQLVGMLRGIAA 120
Query: 122 AVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKN-------GRIKSIVPVGT 174
++YL + YVHR + N+L+++ K++DFG + ++ + + +P+
Sbjct: 121 GMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPI-- 178
Query: 175 PEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPFNYETLDMTYSSILAC 233
+ APE +++ + +T + D+WS G+V +E+++ G P+ DMT ++
Sbjct: 179 -RWTAPEAIQYRK-------FTSASDVWSYGIVMWEVMSYGERPY----WDMTNQDVINA 226
Query: 234 DTED 237
+D
Sbjct: 227 IEQD 230
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 108/255 (42%), Gaps = 43/255 (16%)
Query: 15 SDFDIKRFIQQGNFGDIYLVE-EKQSHNTFVMKKVLREKMPNTIERDIM--VKSKC---- 67
+D + I +GNFG + +K K ++E RD ++ C
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 68 -PYIVNLFYSFQDMNHVYFIMEYVTGG---DFVT---LLENQPHGYLSESKAR------- 113
P I+NL + + ++Y +EY G DF+ +LE P ++ S A
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 114 -FYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFG-SATQVDKNGRIKSIVP 171
+ ++A+ + YL ++HRD+ N+L+ K+ DFG S Q + +P
Sbjct: 145 LHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLP 204
Query: 172 VGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPFN-------YETL 223
V ++A E L + YT + D+WS GV+ +E+++ G TP+ YE L
Sbjct: 205 V---RWMAIESLNY-------SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL 254
Query: 224 DMTY--SSILACDTE 236
Y L CD E
Sbjct: 255 PQGYRLEKPLNCDDE 269
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 92/227 (40%), Gaps = 33/227 (14%)
Query: 10 KNVSASDFDIKRFIQQGNFGDIYL--VEEKQSHNTFVMKKVLREKMPNTIERD------I 61
+ + AS I++ I G+ G++ + + V K L+ RD I
Sbjct: 44 REIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASI 103
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQ 121
M + P I+ L + EY+ G T L G + + + +
Sbjct: 104 MGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTH-DGQFTIMQLVGMLRGVGA 162
Query: 122 AVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFG---------SATQVDKNGRIKSIVPV 172
++YL LGYVHRD+ N+L+ + K++DFG A G+I P+
Sbjct: 163 GMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKI----PI 218
Query: 173 GTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
+ APE + + ++ + D+WS GVV +E+L G P+
Sbjct: 219 ---RWTAPEAIAFRT-------FSSASDVWSFGVVMWEVLAYGERPY 255
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 113/254 (44%), Gaps = 44/254 (17%)
Query: 4 VKELRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTI----ER 59
+KE+ +KN++ + R + G FG++Y + N +V + +P E
Sbjct: 39 LKEVPRKNIT-----LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL 93
Query: 60 DIMVKSKCPYIVN-------LFYSFQDMNHVYFIMEYVTGGDFVTLL-ENQPHGYLSESK 111
D ++++ +N + S Q + + ++E + GGD + L E +P S
Sbjct: 94 DFLMEALIISKLNHQNIVRCIGVSLQSLPR-FILLELMAGGDLKSFLRETRPRPSQPSSL 152
Query: 112 ARFYIYELAQ----AVQYLHGLGYVHRDIKPDNMLLSATGH---LKLTDFGSATQVDKNG 164
A + +A+ QYL ++HRDI N LL+ G K+ DFG A + +
Sbjct: 153 AMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAS 212
Query: 165 RIK----SIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF- 218
+ +++PV +++ PE +MEG +T D WS GV+ +E+ + G P+
Sbjct: 213 YYRKGGCAMLPV---KWMPPEA--FMEGI-----FTSKTDTWSFGVLLWEIFSLGYMPYP 262
Query: 219 ---NYETLDMTYSS 229
N E L+ S
Sbjct: 263 SKSNQEVLEFVTSG 276
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 98/234 (41%), Gaps = 47/234 (20%)
Query: 10 KNVSASDFDIKRFIQQGNFGDIYLVEEK--QSHNTFVMKKVLREKMPNTIERD------I 61
K + A++ I + + G FG++ K V K L+ RD I
Sbjct: 11 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 70
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYEL-- 119
M + P I+ L V + E + G +L + A+F + +L
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL--------DSFLRKHDAQFTVIQLVG 122
Query: 120 -----AQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFG---------SATQVDKNGR 165
A ++YL +GYVHRD+ N+L+++ K++DFG A + G+
Sbjct: 123 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 182
Query: 166 IKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
I P+ + +PE + + + +T + D+WS G+V +E+++ G P+
Sbjct: 183 I----PI---RWTSPEAIAYRK-------FTSASDVWSYGIVLWEVMSYGERPY 222
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 108/255 (42%), Gaps = 43/255 (16%)
Query: 15 SDFDIKRFIQQGNFGDIYLVE-EKQSHNTFVMKKVLREKMPNTIERDIM--VKSKC---- 67
+D + I +GNFG + +K K ++E RD ++ C
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 74
Query: 68 -PYIVNLFYSFQDMNHVYFIMEYVTGG---DFVT---LLENQPHGYLSESKAR------- 113
P I+NL + + ++Y +EY G DF+ +LE P ++ S A
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 114 -FYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFG-SATQVDKNGRIKSIVP 171
+ ++A+ + YL ++HRD+ N+L+ K+ DFG S Q + +P
Sbjct: 135 LHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLP 194
Query: 172 VGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPFN-------YETL 223
V ++A E L + YT + D+WS GV+ +E+++ G TP+ YE L
Sbjct: 195 V---RWMAIESLNY-------SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL 244
Query: 224 DMTY--SSILACDTE 236
Y L CD E
Sbjct: 245 PQGYRLEKPLNCDDE 259
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 114/257 (44%), Gaps = 50/257 (19%)
Query: 4 VKELRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTI----ER 59
+KE+ +KN++ + R + G FG++Y + N +V + +P E
Sbjct: 39 LKEVPRKNIT-----LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDEL 93
Query: 60 DIMVKSKCPYIVNLF----------YSFQDMNHVYFIMEYVTGGDFVTLL-ENQPHGYLS 108
D ++++ I++ F S Q + + ++E + GGD + L E +P
Sbjct: 94 DFLMEA---LIISKFNHQNIVRCIGVSLQSLPR-FILLELMAGGDLKSFLRETRPRPSQP 149
Query: 109 ESKARFYIYELAQ----AVQYLHGLGYVHRDIKPDNMLLSATGH---LKLTDFGSATQVD 161
S A + +A+ QYL ++HRDI N LL+ G K+ DFG A +
Sbjct: 150 SSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY 209
Query: 162 KNGRIK----SIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GST 216
+ + +++PV +++ PE +MEG +T D WS GV+ +E+ + G
Sbjct: 210 RASYYRKGGCAMLPV---KWMPPEA--FMEGI-----FTSKTDTWSFGVLLWEIFSLGYM 259
Query: 217 PF----NYETLDMTYSS 229
P+ N E L+ S
Sbjct: 260 PYPSKSNQEVLEFVTSG 276
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 12/133 (9%)
Query: 83 VYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNML 142
V +MEYV G +L + P + ++ + ++ + + YLH Y+HR + N+L
Sbjct: 88 VQLVMEYVPLG---SLRDYLPRHCVGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNVL 144
Query: 143 LSATGHLKLTDFGSATQVDKNGRIKSIVPVG-TPEY-VAPEVLEWMEGNHGSDGYTGSCD 200
L +K+ DFG A V + + G +P + APE L+ + + S D
Sbjct: 145 LDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYAS-------D 197
Query: 201 LWSIGVVSYELLT 213
+WS GV YELLT
Sbjct: 198 VWSFGVTLYELLT 210
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 60/116 (51%), Gaps = 17/116 (14%)
Query: 115 YIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGT 174
Y +++A+ +++L +HRD+ N+LLS +K+ DFG A + K+
Sbjct: 203 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD----------- 251
Query: 175 PEYV----APEVLEWMEGNHGSDG-YTGSCDLWSIGVVSYELLT-GSTPFNYETLD 224
P+YV A L+WM D YT D+WS GV+ +E+ + G++P+ +D
Sbjct: 252 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 307
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 64/131 (48%), Gaps = 12/131 (9%)
Query: 85 FIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLS 144
+MEYV G +L + P + ++ + ++ + + YLH Y+HR++ N+LL
Sbjct: 95 LVMEYVPLG---SLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRNLAARNVLLD 151
Query: 145 ATGHLKLTDFGSATQVDKNGRIKSIVPVG-TPEY-VAPEVLEWMEGNHGSDGYTGSCDLW 202
+K+ DFG A V + + G +P + APE L+ + + S D+W
Sbjct: 152 NDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYAS-------DVW 204
Query: 203 SIGVVSYELLT 213
S GV YELLT
Sbjct: 205 SFGVTLYELLT 215
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 95/211 (45%), Gaps = 17/211 (8%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP---NTIERDIMVKSKCPYIV 71
+D +K + G +G++Y K+ T +K + + M E +M + K P +V
Sbjct: 11 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 70
Query: 72 NLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGY 131
L Y I+E++T G+ + L +S + +++ A++YL +
Sbjct: 71 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 130
Query: 132 VHRDIKPDNMLLSATGHLKLTDFGSA---TQVDKNGRIKSIVPVGTPEYVAPEVLEWMEG 188
+HRD+ N L+ +K+ DFG + T + P+ ++ APE L +
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI---KWTAPESLAY--- 184
Query: 189 NHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
+ ++ D+W+ GV+ +E+ T G +P+
Sbjct: 185 ----NKFSIKSDVWAFGVLLWEIATYGMSPY 211
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 60/116 (51%), Gaps = 17/116 (14%)
Query: 115 YIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGT 174
Y +++A+ +++L +HRD+ N+LLS +K+ DFG A + K+
Sbjct: 196 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD----------- 244
Query: 175 PEYV----APEVLEWMEGNHGSDG-YTGSCDLWSIGVVSYELLT-GSTPFNYETLD 224
P+YV A L+WM D YT D+WS GV+ +E+ + G++P+ +D
Sbjct: 245 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 300
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 85/188 (45%), Gaps = 36/188 (19%)
Query: 70 IVNLFYSFQDMNHVYFIMEYVTGGDFVTLL--------------ENQPH-------GYLS 108
IVNL + +Y I EY GD + L ENQ L+
Sbjct: 111 IVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLT 170
Query: 109 ESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQV--DKNGRI 166
+ Y++A+ +++L VHRD+ N+L++ +K+ DFG A + D N +
Sbjct: 171 FEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVV 230
Query: 167 K--SIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPFNYETL 223
+ + +PV +++APE L EG YT D+WS G++ +E+ + G P+ +
Sbjct: 231 RGNARLPV---KWMAPESL--FEGI-----YTIKSDVWSYGILLWEIFSLGVNPYPGIPV 280
Query: 224 DMTYSSIL 231
D + ++
Sbjct: 281 DANFYKLI 288
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 12/133 (9%)
Query: 83 VYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNML 142
V +MEYV G +L + P + ++ + ++ + + YLH Y+HR + N+L
Sbjct: 87 VQLVMEYVPLG---SLRDYLPRHCVGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNVL 143
Query: 143 LSATGHLKLTDFGSATQVDKNGRIKSIVPVG-TPEY-VAPEVLEWMEGNHGSDGYTGSCD 200
L +K+ DFG A V + + G +P + APE L+ + + S D
Sbjct: 144 LDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYAS-------D 196
Query: 201 LWSIGVVSYELLT 213
+WS GV YELLT
Sbjct: 197 VWSFGVTLYELLT 209
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 95/211 (45%), Gaps = 17/211 (8%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP---NTIERDIMVKSKCPYIV 71
+D +K + G +G++Y K+ T +K + + M E +M + K P +V
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 72
Query: 72 NLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGY 131
L Y I+E++T G+ + L +S + +++ A++YL +
Sbjct: 73 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 132
Query: 132 VHRDIKPDNMLLSATGHLKLTDFGSA---TQVDKNGRIKSIVPVGTPEYVAPEVLEWMEG 188
+HRD+ N L+ +K+ DFG + T + P+ ++ APE L +
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI---KWTAPESLAY--- 186
Query: 189 NHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
+ ++ D+W+ GV+ +E+ T G +P+
Sbjct: 187 ----NKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 60/116 (51%), Gaps = 17/116 (14%)
Query: 115 YIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGT 174
Y +++A+ +++L +HRD+ N+LLS +K+ DFG A + K+
Sbjct: 198 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD----------- 246
Query: 175 PEYV----APEVLEWMEGNHGSDG-YTGSCDLWSIGVVSYELLT-GSTPFNYETLD 224
P+YV A L+WM D YT D+WS GV+ +E+ + G++P+ +D
Sbjct: 247 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 302
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 98/234 (41%), Gaps = 47/234 (20%)
Query: 10 KNVSASDFDIKRFIQQGNFGDIYLVEEK--QSHNTFVMKKVLREKMPNTIERD------I 61
K + A++ I + + G FG++ K V K L+ RD I
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYEL-- 119
M + P I+ L V + E + G +L + A+F + +L
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL--------DSFLRKHDAQFTVIQLVG 151
Query: 120 -----AQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFG---------SATQVDKNGR 165
A ++YL +GYVHRD+ N+L+++ K++DFG A + G+
Sbjct: 152 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 166 IKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
I P+ + +PE + + + +T + D+WS G+V +E+++ G P+
Sbjct: 212 I----PI---RWTSPEAIAYRK-------FTSASDVWSYGIVLWEVMSYGERPY 251
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 104/250 (41%), Gaps = 51/250 (20%)
Query: 11 NVSASDFDIKRFIQQGNFGDIYLVEEKQSHN-------TFVMKKVLREKMPNTI-----E 58
++ D +K + +G FG ++L E HN V K L+E + E
Sbjct: 14 HIKRRDIVLKWELGEGAFGKVFLAE---CHNLLPEQDKMLVAVKALKEASESARQDFQRE 70
Query: 59 RDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLL-------------ENQPHG 105
+++ + +IV F + + + EY+ GD L E+ G
Sbjct: 71 AELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPG 130
Query: 106 YLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDK--- 162
L + ++A + YL GL +VHRD+ N L+ +K+ DFG + +
Sbjct: 131 PLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDY 190
Query: 163 ---NGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
GR +++P+ ++ PE + + + +T D+WS GVV +E+ T G P+
Sbjct: 191 YRVGGR--TMLPI---RWMPPESILYRK-------FTTESDVWSFGVVLWEIFTYGKQPW 238
Query: 219 ----NYETLD 224
N E +D
Sbjct: 239 YQLSNTEAID 248
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 60/116 (51%), Gaps = 17/116 (14%)
Query: 115 YIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGT 174
Y +++A+ +++L +HRD+ N+LLS +K+ DFG A + K+
Sbjct: 205 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD----------- 253
Query: 175 PEYV----APEVLEWMEGNHGSDG-YTGSCDLWSIGVVSYELLT-GSTPFNYETLD 224
P+YV A L+WM D YT D+WS GV+ +E+ + G++P+ +D
Sbjct: 254 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 309
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 107/231 (46%), Gaps = 41/231 (17%)
Query: 23 IQQGNFG-----DIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMVKSKCPY-------I 70
+ +G FG D + +++ + T V K+L+E ++ R +M + K +
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRT-VAVKMLKEGATHSEHRALMSELKILIHIGHHLNV 93
Query: 71 VNLFYSF-QDMNHVYFIMEYVTGGDFVTLLENQ-----PH-----GYLSESKARFYIYEL 119
VNL + + + I+E+ G+ T L ++ P+ +L+ Y +++
Sbjct: 94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQV 153
Query: 120 AQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYV- 178
A+ +++L +HRD+ N+LLS +K+ DFG A + K+ P+YV
Sbjct: 154 AKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKD-----------PDYVR 202
Query: 179 ---APEVLEWMEGNHGSDG-YTGSCDLWSIGVVSYELLT-GSTPFNYETLD 224
A L+WM D YT D+WS GV+ +E+ + G++P+ +D
Sbjct: 203 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 253
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 94/215 (43%), Gaps = 30/215 (13%)
Query: 21 RFIQQGNFGDIY---LVEEKQSHNTFVMKKVLREKMPNTIERDIMVKSKCPYIVNLFYSF 77
+ + G FG +Y V E ++ V K+L E + M ++ L +
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEA-------LIMAS 73
Query: 78 QDMNHVYFIMEYVTGGDFVTLLENQPHG----YLSESKARF-------YIYELAQAVQYL 126
D H+ ++ + + PHG Y+ E K + ++A+ + YL
Sbjct: 74 MDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYL 133
Query: 127 HGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTP-EYVAPEVLEW 185
VHRD+ N+L+ + H+K+TDFG A ++ + + + P +++A E + +
Sbjct: 134 EERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHY 193
Query: 186 MEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPFN 219
+ H S D+WS GV +EL+T G P++
Sbjct: 194 RKFTHQS-------DVWSYGVTIWELMTFGGKPYD 221
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 96/218 (44%), Gaps = 36/218 (16%)
Query: 21 RFIQQGNFGDIY---LVEEKQSHNTFVMKKVLREKMPNTIERDIMVKSKCPYIVNLFYSF 77
+ + G FG +Y V E ++ V K+L E + M ++ L +
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEA-------LIMAS 96
Query: 78 QDMNHVYFIMEYVTGGDFVTLLENQPHG----YLSESKARF-------YIYELAQAVQYL 126
D H+ ++ + + PHG Y+ E K + ++A+ + YL
Sbjct: 97 MDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYL 156
Query: 127 HGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSI----VPVGTPEYVAPEV 182
VHRD+ N+L+ + H+K+TDFG A ++ + + + +P+ +++A E
Sbjct: 157 EERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPI---KWMALEC 213
Query: 183 LEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPFN 219
+ + + H S D+WS GV +EL+T G P++
Sbjct: 214 IHYRKFTHQS-------DVWSYGVTIWELMTFGGKPYD 244
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 60/116 (51%), Gaps = 17/116 (14%)
Query: 115 YIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGT 174
Y +++A+ +++L +HRD+ N+LLS +K+ DFG A + K+
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD----------- 192
Query: 175 PEYV----APEVLEWMEGNHGSDG-YTGSCDLWSIGVVSYELLT-GSTPFNYETLD 224
P+YV A L+WM D YT D+WS GV+ +E+ + G++P+ +D
Sbjct: 193 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 248
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 97/223 (43%), Gaps = 43/223 (19%)
Query: 13 SASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIER------------- 59
+ ++FD K I G FG +Y K VLR+ ++R
Sbjct: 37 ATNNFDHKFLIGHGVFGKVY-------------KGVLRDGAKVALKRRTPESSQGIEEFE 83
Query: 60 -DIMVKSKC--PYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLL--ENQPHGYLSESKARF 114
+I S C P++V+L + N + I +Y+ G+ L + P +S +
Sbjct: 84 TEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLE 143
Query: 115 YIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFG---SATQVDKNGRIKSIVP 171
A+ + YLH +HRD+K N+LL K+TDFG T++D+ + +V
Sbjct: 144 ICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQT-HLXXVVK 202
Query: 172 VGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTG 214
GT Y+ PE +++G T D++S GVV +E+L
Sbjct: 203 -GTLGYIDPEY--FIKGR-----LTEKSDVYSFGVVLFEVLCA 237
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 104/250 (41%), Gaps = 51/250 (20%)
Query: 11 NVSASDFDIKRFIQQGNFGDIYLVEEKQSHN-------TFVMKKVLREKMPNTI-----E 58
++ D +K + +G FG ++L E HN V K L+E + E
Sbjct: 8 HIKRRDIVLKWELGEGAFGKVFLAE---CHNLLPEQDKMLVAVKALKEASESARQDFQRE 64
Query: 59 RDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLL-------------ENQPHG 105
+++ + +IV F + + + EY+ GD L E+ G
Sbjct: 65 AELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPG 124
Query: 106 YLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDK--- 162
L + ++A + YL GL +VHRD+ N L+ +K+ DFG + +
Sbjct: 125 PLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDY 184
Query: 163 ---NGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
GR +++P+ ++ PE + + + +T D+WS GVV +E+ T G P+
Sbjct: 185 YRVGGR--TMLPI---RWMPPESILYRK-------FTTESDVWSFGVVLWEIFTYGKQPW 232
Query: 219 ----NYETLD 224
N E +D
Sbjct: 233 YQLSNTEAID 242
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 104/250 (41%), Gaps = 51/250 (20%)
Query: 11 NVSASDFDIKRFIQQGNFGDIYLVEEKQSHN-------TFVMKKVLREKMPNTI-----E 58
++ D +K + +G FG ++L E HN V K L+E + E
Sbjct: 37 HIKRRDIVLKWELGEGAFGKVFLAE---CHNLLPEQDKMLVAVKALKEASESARQDFQRE 93
Query: 59 RDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLL-------------ENQPHG 105
+++ + +IV F + + + EY+ GD L E+ G
Sbjct: 94 AELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPG 153
Query: 106 YLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDK--- 162
L + ++A + YL GL +VHRD+ N L+ +K+ DFG + +
Sbjct: 154 PLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDY 213
Query: 163 ---NGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
GR +++P+ ++ PE + + + +T D+WS GVV +E+ T G P+
Sbjct: 214 YRVGGR--TMLPI---RWMPPESILYRK-------FTTESDVWSFGVVLWEIFTYGKQPW 261
Query: 219 ----NYETLD 224
N E +D
Sbjct: 262 YQLSNTEAID 271
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 64/131 (48%), Gaps = 12/131 (9%)
Query: 85 FIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLS 144
+MEYV G +L + P + ++ + ++ + + YLH Y+HR++ N+LL
Sbjct: 95 LVMEYVPLG---SLRDYLPRHSIGLAQLLLFAQQICEGMAYLHSQHYIHRNLAARNVLLD 151
Query: 145 ATGHLKLTDFGSATQVDKNGRIKSIVPVG-TPEY-VAPEVLEWMEGNHGSDGYTGSCDLW 202
+K+ DFG A V + + G +P + APE L+ + + S D+W
Sbjct: 152 NDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYAS-------DVW 204
Query: 203 SIGVVSYELLT 213
S GV YELLT
Sbjct: 205 SFGVTLYELLT 215
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 60/116 (51%), Gaps = 17/116 (14%)
Query: 115 YIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGT 174
Y +++A+ +++L +HRD+ N+LLS +K+ DFG A + K+
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD----------- 192
Query: 175 PEYV----APEVLEWMEGNHGSDG-YTGSCDLWSIGVVSYELLT-GSTPFNYETLD 224
P+YV A L+WM D YT D+WS GV+ +E+ + G++P+ +D
Sbjct: 193 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 248
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 95/211 (45%), Gaps = 17/211 (8%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP---NTIERDIMVKSKCPYIV 71
+D +K + G +G++Y K+ T +K + + M E +M + K P +V
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 72
Query: 72 NLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGY 131
L Y I+E++T G+ + L +S + +++ A++YL +
Sbjct: 73 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 132
Query: 132 VHRDIKPDNMLLSATGHLKLTDFGSA---TQVDKNGRIKSIVPVGTPEYVAPEVLEWMEG 188
+HRD+ N L+ +K+ DFG + T + P+ ++ APE L +
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI---KWTAPESLAY--- 186
Query: 189 NHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
+ ++ D+W+ GV+ +E+ T G +P+
Sbjct: 187 ----NKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 60/116 (51%), Gaps = 17/116 (14%)
Query: 115 YIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGT 174
Y +++A+ +++L +HRD+ N+LLS +K+ DFG A + K+
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD----------- 201
Query: 175 PEYV----APEVLEWMEGNHGSDG-YTGSCDLWSIGVVSYELLT-GSTPFNYETLD 224
P+YV A L+WM D YT D+WS GV+ +E+ + G++P+ +D
Sbjct: 202 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 257
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 60/116 (51%), Gaps = 17/116 (14%)
Query: 115 YIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGT 174
Y +++A+ +++L +HRD+ N+LLS +K+ DFG A + K+
Sbjct: 155 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD----------- 203
Query: 175 PEYV----APEVLEWMEGNHGSDG-YTGSCDLWSIGVVSYELLT-GSTPFNYETLD 224
P+YV A L+WM D YT D+WS GV+ +E+ + G++P+ +D
Sbjct: 204 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 259
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 60/116 (51%), Gaps = 17/116 (14%)
Query: 115 YIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGT 174
Y +++A+ +++L +HRD+ N+LLS +K+ DFG A + K+
Sbjct: 190 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD----------- 238
Query: 175 PEYV----APEVLEWMEGNHGSDG-YTGSCDLWSIGVVSYELLT-GSTPFNYETLD 224
P+YV A L+WM D YT D+WS GV+ +E+ + G++P+ +D
Sbjct: 239 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 294
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 95/211 (45%), Gaps = 17/211 (8%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP---NTIERDIMVKSKCPYIV 71
+D +K + G +G++Y K+ T +K + + M E +M + K P +V
Sbjct: 11 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 70
Query: 72 NLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGY 131
L Y I E++T G+ + L +S + +++ A++YL +
Sbjct: 71 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 130
Query: 132 VHRDIKPDNMLLSATGHLKLTDFGSATQVDKN---GRIKSIVPVGTPEYVAPEVLEWMEG 188
+HRD+ N L+ +K+ DFG + + + + P+ ++ APE L +
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPI---KWTAPESLAY--- 184
Query: 189 NHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
+ ++ D+W+ GV+ +E+ T G +P+
Sbjct: 185 ----NKFSIKSDVWAFGVLLWEIATYGMSPY 211
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 107/231 (46%), Gaps = 41/231 (17%)
Query: 23 IQQGNFG-----DIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMVKSKCPY-------I 70
+ +G FG D + +++ + T V K+L+E ++ R +M + K +
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRT-VAVKMLKEGATHSEHRALMSELKILIHIGHHLNV 93
Query: 71 VNLFYSF-QDMNHVYFIMEYVTGGDFVTLLENQ-----PH-----GYLSESKARFYIYEL 119
VNL + + + I+E+ G+ T L ++ P+ +L+ Y +++
Sbjct: 94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQV 153
Query: 120 AQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYV- 178
A+ +++L +HRD+ N+LLS +K+ DFG A + K+ P+YV
Sbjct: 154 AKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKD-----------PDYVR 202
Query: 179 ---APEVLEWMEGNHGSDG-YTGSCDLWSIGVVSYELLT-GSTPFNYETLD 224
A L+WM D YT D+WS GV+ +E+ + G++P+ +D
Sbjct: 203 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 253
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 95/220 (43%), Gaps = 39/220 (17%)
Query: 13 SASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIER------------- 59
+ ++FD K I G FG +Y K VLR+ ++R
Sbjct: 37 ATNNFDHKFLIGHGVFGKVY-------------KGVLRDGAKVALKRRTPESSQGIEEFE 83
Query: 60 -DIMVKSKC--PYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLL--ENQPHGYLSESKARF 114
+I S C P++V+L + N + I +Y+ G+ L + P +S +
Sbjct: 84 TEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLE 143
Query: 115 YIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPV-G 173
A+ + YLH +HRD+K N+LL K+TDFG + + + G+ V G
Sbjct: 144 ICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKG 203
Query: 174 TPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT 213
T Y+ PE +++G T D++S GVV +E+L
Sbjct: 204 TLGYIDPEY--FIKGR-----LTEKSDVYSFGVVLFEVLC 236
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 99/219 (45%), Gaps = 19/219 (8%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP---NTIERDIMVKSKCPYIV 71
+D +K + G +G++Y K+ T +K + + M E +M + K P +V
Sbjct: 14 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 73
Query: 72 NLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGY 131
L Y I+E++T G+ + L ++ + +++ A++YL +
Sbjct: 74 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 133
Query: 132 VHRDIKPDNMLLSATGHLKLTDFGSA---TQVDKNGRIKSIVPVGTPEYVAPEVLEWMEG 188
+HRD+ N L+ +K+ DFG + T + P+ ++ APE L +
Sbjct: 134 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI---KWTAPESLAY--- 187
Query: 189 NHGSDGYTGSCDLWSIGVVSYELLT-GSTPFNYETLDMT 226
+ ++ D+W+ GV+ +E+ T G +P Y +D++
Sbjct: 188 ----NKFSIKSDVWAFGVLLWEIATYGMSP--YPGIDLS 220
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 94/211 (44%), Gaps = 17/211 (8%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP---NTIERDIMVKSKCPYIV 71
+D +K + G +G++Y K+ T +K + + M E +M + K P +V
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 77
Query: 72 NLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGY 131
L Y I E++T G+ + L +S + +++ A++YL +
Sbjct: 78 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 137
Query: 132 VHRDIKPDNMLLSATGHLKLTDFGSA---TQVDKNGRIKSIVPVGTPEYVAPEVLEWMEG 188
+HRD+ N L+ +K+ DFG + T + P+ ++ APE L +
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI---KWTAPESLAY--- 191
Query: 189 NHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
+ ++ D+W+ GV+ +E+ T G +P+
Sbjct: 192 ----NKFSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 94/211 (44%), Gaps = 17/211 (8%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP---NTIERDIMVKSKCPYIV 71
+D +K + G +G++Y K+ T +K + + M E +M + K P +V
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 72
Query: 72 NLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGY 131
L Y I E++T G+ + L +S + +++ A++YL +
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 132
Query: 132 VHRDIKPDNMLLSATGHLKLTDFGSA---TQVDKNGRIKSIVPVGTPEYVAPEVLEWMEG 188
+HRD+ N L+ +K+ DFG + T + P+ ++ APE L +
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI---KWTAPESLAY--- 186
Query: 189 NHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
+ ++ D+W+ GV+ +E+ T G +P+
Sbjct: 187 ----NKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 78/164 (47%), Gaps = 27/164 (16%)
Query: 70 IVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKAR--------FYIYELAQ 121
IVNL + V I EY GD + L + L + R + ++AQ
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQ 171
Query: 122 AVQYLHGLGYVHRDIKPDNMLLSATGHL-KLTDFGSATQV--DKNGRIK--SIVPVGTPE 176
+ +L +HRD+ N+LL+ GH+ K+ DFG A + D N +K + +PV +
Sbjct: 172 GMAFLASKNCIHRDVAARNVLLT-NGHVAKIGDFGLARDIMNDSNYIVKGNARLPV---K 227
Query: 177 YVAPE-VLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
++APE + + + YT D+WS G++ +E+ + G P+
Sbjct: 228 WMAPESIFDCV--------YTVQSDVWSYGILLWEIFSLGLNPY 263
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 74/153 (48%), Gaps = 15/153 (9%)
Query: 70 IVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGL 129
+V L+ ++ I EY+ G + L H + ++ ++ +A++YL
Sbjct: 81 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLESK 139
Query: 130 GYVHRDIKPDNMLLSATGHLKLTDFGSATQV---DKNGRIKSIVPVGTPEYVAPEVLEWM 186
++HRD+ N L++ G +K++DFG + V ++ + S PV + PEVL +
Sbjct: 140 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPV---RWSPPEVLMYS 196
Query: 187 EGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
+ ++ D+W+ GV+ +E+ + G P+
Sbjct: 197 K-------FSSKSDIWAFGVLMWEIYSLGKMPY 222
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 67/137 (48%), Gaps = 9/137 (6%)
Query: 83 VYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNML 142
++ I EY+ G + L H + ++ ++ +A++YL ++HRD+ N L
Sbjct: 74 IFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLESKQFLHRDLAARNCL 132
Query: 143 LSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLW 202
++ G +K++DFG + V + S+ + PEVL + + ++ D+W
Sbjct: 133 VNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSK-------FSSKSDIW 185
Query: 203 SIGVVSYELLT-GSTPF 218
+ GV+ +E+ + G P+
Sbjct: 186 AFGVLMWEIYSLGKMPY 202
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 98/234 (41%), Gaps = 49/234 (20%)
Query: 23 IQQGNFGDI-----YLVEEKQSHNTFVMKKVLREKMPNTI-----ERDIMVKSKCPYIVN 72
+ +G FG + + ++ + + T +K + P+ + E +++ + P+++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 73 LFYSFQDMNHVYFIMEYVTGGDFVTLLENQ---PHGYLSESKARF--------------- 114
L+ + + I+EY G L GYL +R
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 115 ----YIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQV----DKNGRI 166
+ ++++Q +QYL + VHRD+ N+L++ +K++DFG + V R
Sbjct: 151 DLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRS 210
Query: 167 KSIVPVGTPEYVAPEVLEWMEGNHGSDG-YTGSCDLWSIGVVSYELLT-GSTPF 218
+ +PV +WM D YT D+WS GV+ +E++T G P+
Sbjct: 211 QGRIPV-----------KWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPY 253
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 94/211 (44%), Gaps = 17/211 (8%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP---NTIERDIMVKSKCPYIV 71
+D +K + G +G++Y K+ T +K + + M E +M + K P +V
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 72
Query: 72 NLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGY 131
L Y I E++T G+ + L +S + +++ A++YL +
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 132
Query: 132 VHRDIKPDNMLLSATGHLKLTDFGSA---TQVDKNGRIKSIVPVGTPEYVAPEVLEWMEG 188
+HRD+ N L+ +K+ DFG + T + P+ ++ APE L +
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI---KWTAPESLAY--- 186
Query: 189 NHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
+ ++ D+W+ GV+ +E+ T G +P+
Sbjct: 187 ----NKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 108/255 (42%), Gaps = 43/255 (16%)
Query: 15 SDFDIKRFIQQGNFGDIYLVE-EKQSHNTFVMKKVLREKMPNTIERDIM--VKSKC---- 67
+D + I +GNFG + +K K ++E RD ++ C
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 81
Query: 68 -PYIVNLFYSFQDMNHVYFIMEYVTGG---DFVT---LLENQPHGYLSESKAR------- 113
P I+NL + + ++Y +EY G DF+ +LE P ++ S A
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 114 -FYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFG-SATQVDKNGRIKSIVP 171
+ ++A+ + YL ++HR++ N+L+ K+ DFG S Q + +P
Sbjct: 142 LHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLP 201
Query: 172 VGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPFN-------YETL 223
V ++A E L + YT + D+WS GV+ +E+++ G TP+ YE L
Sbjct: 202 V---RWMAIESLNY-------SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL 251
Query: 224 DMTYS--SILACDTE 236
Y L CD E
Sbjct: 252 PQGYRLEKPLNCDDE 266
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 69/140 (49%), Gaps = 15/140 (10%)
Query: 83 VYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNML 142
++ I EY+ G + L H + ++ ++ +A++YL ++HRD+ N L
Sbjct: 78 IFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLESKQFLHRDLAARNCL 136
Query: 143 LSATGHLKLTDFGSATQV---DKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSC 199
++ G +K++DFG + V + + S PV + PEVL + + ++
Sbjct: 137 VNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPV---RWSPPEVLMYSK-------FSSKS 186
Query: 200 DLWSIGVVSYELLT-GSTPF 218
D+W+ GV+ +E+ + G P+
Sbjct: 187 DIWAFGVLMWEIYSLGKMPY 206
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 78/164 (47%), Gaps = 27/164 (16%)
Query: 70 IVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKAR--------FYIYELAQ 121
IVNL + V I EY GD + L + L + R + ++AQ
Sbjct: 104 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQ 163
Query: 122 AVQYLHGLGYVHRDIKPDNMLLSATGHL-KLTDFGSATQV--DKNGRIK--SIVPVGTPE 176
+ +L +HRD+ N+LL+ GH+ K+ DFG A + D N +K + +PV +
Sbjct: 164 GMAFLASKNCIHRDVAARNVLLT-NGHVAKIGDFGLARDIMNDSNYIVKGNARLPV---K 219
Query: 177 YVAPE-VLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
++APE + + + YT D+WS G++ +E+ + G P+
Sbjct: 220 WMAPESIFDCV--------YTVQSDVWSYGILLWEIFSLGLNPY 255
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 104/233 (44%), Gaps = 28/233 (12%)
Query: 2 DVVKELRQKNVSASDFDIKRFIQQGNFGDIYL--VEEKQSHNTFVMKKVL------REKM 53
+ V+E K + S I+ I G FG++ ++ + V K L R++
Sbjct: 4 EAVREF-AKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRR 62
Query: 54 PNTIERDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKAR 113
E IM + + P I+ L + V + E++ G + L G + +
Sbjct: 63 EFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLN-DGQFTVIQLV 121
Query: 114 FYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKN-------GRI 166
+ +A ++YL + YVHRD+ N+L+++ K++DFG + +++N +
Sbjct: 122 GMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSL 181
Query: 167 KSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
+P+ + APE + + + +T + D WS G+V +E+++ G P+
Sbjct: 182 GGKIPI---RWTAPEAIAFRK-------FTSASDAWSYGIVMWEVMSFGERPY 224
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 16/108 (14%)
Query: 122 AVQYLHGLGYVHRDIKPDNMLLS---ATGHLK--LTDFGSATQVDKNGRI----KSIVPV 172
+ +LH L VHRD+KP N+L+S A G +K ++DFG ++ GR +S VP
Sbjct: 130 GLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKL-AVGRHSFSRRSGVP- 187
Query: 173 GTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPFN 219
GT ++APE+L + T + D++S G V Y +++ GS PF
Sbjct: 188 GTEGWIAPEMLS----EDCKENPTYTVDIFSAGCVFYYVISEGSHPFG 231
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 98/234 (41%), Gaps = 49/234 (20%)
Query: 23 IQQGNFGDI-----YLVEEKQSHNTFVMKKVLREKMPNTI-----ERDIMVKSKCPYIVN 72
+ +G FG + + ++ + + T +K + P+ + E +++ + P+++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 73 LFYSFQDMNHVYFIMEYVTGGDFVTLLENQ---PHGYLSESKARF--------------- 114
L+ + + I+EY G L GYL +R
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 115 ----YIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQV----DKNGRI 166
+ ++++Q +QYL + VHRD+ N+L++ +K++DFG + V R
Sbjct: 151 DLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRS 210
Query: 167 KSIVPVGTPEYVAPEVLEWMEGNHGSDG-YTGSCDLWSIGVVSYELLT-GSTPF 218
+ +PV +WM D YT D+WS GV+ +E++T G P+
Sbjct: 211 QGRIPV-----------KWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPY 253
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 94/211 (44%), Gaps = 17/211 (8%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP---NTIERDIMVKSKCPYIV 71
+D +K + G +G++Y K+ T +K + + M E +M + K P +V
Sbjct: 14 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 73
Query: 72 NLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGY 131
L Y I E++T G+ + L ++ + +++ A++YL +
Sbjct: 74 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 133
Query: 132 VHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTP---EYVAPEVLEWMEG 188
+HRD+ N L+ +K+ DFG + + + P G ++ APE L +
Sbjct: 134 IHRDLAARNCLVGENHLVKVADFGLSRLMTGD---TYTAPAGAKFPIKWTAPESLAY--- 187
Query: 189 NHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
+ ++ D+W+ GV+ +E+ T G +P+
Sbjct: 188 ----NKFSIKSDVWAFGVLLWEIATYGMSPY 214
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 31/168 (18%)
Query: 70 IVNLFYSFQDMNHVYFIMEYVTGGDFVT-------LLENQPHGYLSESKAR-----FYIY 117
IVNL + V I EY GD + +LE P ++ S A +
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSS 171
Query: 118 ELAQAVQYLHGLGYVHRDIKPDNMLLSATGHL-KLTDFGSATQV--DKNGRIK--SIVPV 172
++AQ + +L +HRD+ N+LL+ GH+ K+ DFG A + D N +K + +PV
Sbjct: 172 QVAQGMAFLASKNCIHRDVAARNVLLT-NGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 230
Query: 173 GTPEYVAPE-VLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
+++APE + + + YT D+WS G++ +E+ + G P+
Sbjct: 231 ---KWMAPESIFDCV--------YTVQSDVWSYGILLWEIFSLGLNPY 267
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 69/140 (49%), Gaps = 15/140 (10%)
Query: 83 VYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNML 142
++ I EY+ G + L H + ++ ++ +A++YL ++HRD+ N L
Sbjct: 79 IFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLESKQFLHRDLAARNCL 137
Query: 143 LSATGHLKLTDFGSATQV---DKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSC 199
++ G +K++DFG + V + + S PV + PEVL + + ++
Sbjct: 138 VNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPV---RWSPPEVLMYSK-------FSSKS 187
Query: 200 DLWSIGVVSYELLT-GSTPF 218
D+W+ GV+ +E+ + G P+
Sbjct: 188 DIWAFGVLMWEIYSLGKMPY 207
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 73/153 (47%), Gaps = 15/153 (9%)
Query: 70 IVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGL 129
+V L+ ++ I EY+ G + L H + ++ ++ +A++YL
Sbjct: 81 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLESK 139
Query: 130 GYVHRDIKPDNMLLSATGHLKLTDFGSATQV---DKNGRIKSIVPVGTPEYVAPEVLEWM 186
++HRD+ N L++ G +K++DFG + V + + S PV + PEVL +
Sbjct: 140 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPV---RWSPPEVLMYS 196
Query: 187 EGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
+ ++ D+W+ GV+ +E+ + G P+
Sbjct: 197 K-------FSSKSDIWAFGVLMWEIYSLGKMPY 222
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 94/211 (44%), Gaps = 17/211 (8%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP---NTIERDIMVKSKCPYIV 71
+D +K + G +G++Y K+ T +K + + M E +M + K P +V
Sbjct: 15 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 74
Query: 72 NLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGY 131
L Y I E++T G+ + L ++ + +++ A++YL +
Sbjct: 75 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 134
Query: 132 VHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTP---EYVAPEVLEWMEG 188
+HRD+ N L+ +K+ DFG + + + P G ++ APE L +
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMTGD---TYTAPAGAKFPIKWTAPESLAY--- 188
Query: 189 NHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
+ ++ D+W+ GV+ +E+ T G +P+
Sbjct: 189 ----NKFSIKSDVWAFGVLLWEIATYGMSPY 215
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 81/173 (46%), Gaps = 23/173 (13%)
Query: 57 IERDIMVKSKC--PYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARF 114
+R++ + S P IV L+ N +ME+V GD L ++ H K R
Sbjct: 70 FQREVFIMSNLNHPNIVKLYGLMH--NPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRL 127
Query: 115 YIYELAQAVQYLHGLG--YVHRDIKPDNMLL-----SATGHLKLTDFGSATQVDKNGRIK 167
+ ++A ++Y+ VHRD++ N+ L +A K+ DFG++ Q +
Sbjct: 128 ML-DIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQ-----SVH 181
Query: 168 SIVPV-GTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFN 219
S+ + G +++APE + E + YT D +S ++ Y +LTG PF+
Sbjct: 182 SVSGLLGNFQWMAPETIGAEE-----ESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 99/234 (42%), Gaps = 49/234 (20%)
Query: 23 IQQGNFGDI-----YLVEEKQSHNTFVMKKVLREKMPNTI-----ERDIMVKSKCPYIVN 72
+ +G FG + + ++ + + T +K + P+ + E +++ + P+++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 73 LFYSFQDMNHVYFIMEYVTGGDFVTLLENQ---PHGYLSESKARF--------------- 114
L+ + + I+EY G L GYL +R
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 115 ----YIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNG----RI 166
+ ++++Q +QYL + VHRD+ N+L++ +K++DFG + V + R
Sbjct: 151 DLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRS 210
Query: 167 KSIVPVGTPEYVAPEVLEWMEGNHGSDG-YTGSCDLWSIGVVSYELLT-GSTPF 218
+ +PV +WM D YT D+WS GV+ +E++T G P+
Sbjct: 211 QGRIPV-----------KWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPY 253
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 104/229 (45%), Gaps = 37/229 (16%)
Query: 7 LRQKNVSASDFDIKRFIQQGNFG----DIYLVEEKQSHNTFVMKKVLREKMPNTIERDIM 62
L++ N+ +D ++ GNFG +Y + +KQ V KVL++ ++M
Sbjct: 6 LKRDNLLIADIELG----CGNFGSVRQGVYRMRKKQID---VAIKVLKQGTEKADTEEMM 58
Query: 63 VKSKC------PYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLL----ENQPHGYLSESKA 112
+++ PYIV L Q + +ME GG L E P ++E
Sbjct: 59 REAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAE--- 114
Query: 113 RFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPV 172
+++++ ++YL +VHRD+ N+LL + K++DFG + + + +
Sbjct: 115 --LLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSA 172
Query: 173 G-TP-EYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
G P ++ APE + + + ++ D+WS GV +E L+ G P+
Sbjct: 173 GKWPLKWYAPECINFRK-------FSSRSDVWSYGVTMWEALSYGQKPY 214
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 77/149 (51%), Gaps = 19/149 (12%)
Query: 86 IMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSA 145
++ Y+ GD + N+ H + F + ++A+ ++YL +VHRD+ N +L
Sbjct: 109 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVAKGMKYLASKKFVHRDLAARNCMLDE 167
Query: 146 TGHLKLTDFGSATQV-DK-----NGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSC 199
+K+ DFG A + DK + + + +PV +++A E L+ + +T
Sbjct: 168 KFTVKVADFGLARDMYDKEXXSVHNKTGAKLPV---KWMALESLQ-------TQKFTTKS 217
Query: 200 DLWSIGVVSYELLT-GSTPF-NYETLDMT 226
D+WS GV+ +EL+T G+ P+ + T D+T
Sbjct: 218 DVWSFGVLLWELMTRGAPPYPDVNTFDIT 246
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 95/211 (45%), Gaps = 17/211 (8%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP---NTIERDIMVKSKCPYIV 71
+D +K + G +G++Y K+ T +K + + M E +M + K P +V
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 77
Query: 72 NLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGY 131
L Y I+E++T G+ + L ++ + +++ A++YL +
Sbjct: 78 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 137
Query: 132 VHRDIKPDNMLLSATGHLKLTDFGSA---TQVDKNGRIKSIVPVGTPEYVAPEVLEWMEG 188
+HRD+ N L+ +K+ DFG + T + P+ ++ APE L +
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI---KWTAPESLAY--- 191
Query: 189 NHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
+ ++ D+W+ GV+ +E+ T G +P+
Sbjct: 192 ----NKFSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 73/153 (47%), Gaps = 15/153 (9%)
Query: 70 IVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGL 129
+V L+ ++ I EY+ G + L H + ++ ++ +A++YL
Sbjct: 72 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLESK 130
Query: 130 GYVHRDIKPDNMLLSATGHLKLTDFGSATQV---DKNGRIKSIVPVGTPEYVAPEVLEWM 186
++HRD+ N L++ G +K++DFG + V + + S PV + PEVL +
Sbjct: 131 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPV---RWSPPEVLMYS 187
Query: 187 EGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
+ ++ D+W+ GV+ +E+ + G P+
Sbjct: 188 K-------FSSKSDIWAFGVLMWEIYSLGKMPY 213
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 104/235 (44%), Gaps = 41/235 (17%)
Query: 19 IKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDI---MVKSKC------PY 69
+ + + +G FG + KQ T + V K+ N+ +R+I + ++ C P
Sbjct: 38 LGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPN 97
Query: 70 IVNLF-----YSFQDMNHVYFIMEYVTGGDFVTLL-----ENQPHGYLSESKARFYIYEL 119
++ L S Q + I+ ++ GD T L E P ++ +F + ++
Sbjct: 98 VIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMV-DI 156
Query: 120 AQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQV-----DKNGRIKSIVPVGT 174
A ++YL ++HRD+ N +L + + DFG + ++ + GRI + PV
Sbjct: 157 ALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKM-PV-- 213
Query: 175 PEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF----NYETLD 224
+++A E L YT D+W+ GV +E+ T G TP+ N+E D
Sbjct: 214 -KWIAIESL-------ADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYD 260
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 94/211 (44%), Gaps = 17/211 (8%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP---NTIERDIMVKSKCPYIV 71
+D +K + G +G++Y K+ T +K + + M E +M + K P +V
Sbjct: 15 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 74
Query: 72 NLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGY 131
L Y I E++T G+ + L ++ + +++ A++YL +
Sbjct: 75 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 134
Query: 132 VHRDIKPDNMLLSATGHLKLTDFGSA---TQVDKNGRIKSIVPVGTPEYVAPEVLEWMEG 188
+HRD+ N L+ +K+ DFG + T + P+ ++ APE L +
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI---KWTAPESLAY--- 188
Query: 189 NHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
+ ++ D+W+ GV+ +E+ T G +P+
Sbjct: 189 ----NKFSIKSDVWAFGVLLWEIATYGMSPY 215
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 94/211 (44%), Gaps = 17/211 (8%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP---NTIERDIMVKSKCPYIV 71
+D +K + G +G++Y K+ T +K + + M E +M + K P +V
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 77
Query: 72 NLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGY 131
L Y I E++T G+ + L ++ + +++ A++YL +
Sbjct: 78 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 137
Query: 132 VHRDIKPDNMLLSATGHLKLTDFGSA---TQVDKNGRIKSIVPVGTPEYVAPEVLEWMEG 188
+HRD+ N L+ +K+ DFG + T + P+ ++ APE L +
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI---KWTAPESLAY--- 191
Query: 189 NHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
+ ++ D+W+ GV+ +E+ T G +P+
Sbjct: 192 ----NKFSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 94/211 (44%), Gaps = 17/211 (8%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP---NTIERDIMVKSKCPYIV 71
+D +K + G +G++Y K+ T +K + + M E +M + K P +V
Sbjct: 15 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 74
Query: 72 NLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGY 131
L Y I E++T G+ + L ++ + +++ A++YL +
Sbjct: 75 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 134
Query: 132 VHRDIKPDNMLLSATGHLKLTDFGSA---TQVDKNGRIKSIVPVGTPEYVAPEVLEWMEG 188
+HRD+ N L+ +K+ DFG + T + P+ ++ APE L +
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI---KWTAPESLAY--- 188
Query: 189 NHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
+ ++ D+W+ GV+ +E+ T G +P+
Sbjct: 189 ----NKFSIKSDVWAFGVLLWEIATYGMSPY 215
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 98/219 (44%), Gaps = 19/219 (8%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP---NTIERDIMVKSKCPYIV 71
+D +K + G +G++Y K+ T +K + + M E +M + K P +V
Sbjct: 220 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 279
Query: 72 NLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGY 131
L Y I E++T G+ + L +S + +++ A++YL +
Sbjct: 280 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 339
Query: 132 VHRDIKPDNMLLSATGHLKLTDFGSA---TQVDKNGRIKSIVPVGTPEYVAPEVLEWMEG 188
+HR++ N L+ +K+ DFG + T + P+ ++ APE L +
Sbjct: 340 IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI---KWTAPESLAY--- 393
Query: 189 NHGSDGYTGSCDLWSIGVVSYELLT-GSTPFNYETLDMT 226
+ ++ D+W+ GV+ +E+ T G +P Y +D++
Sbjct: 394 ----NKFSIKSDVWAFGVLLWEIATYGMSP--YPGIDLS 426
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 94/211 (44%), Gaps = 17/211 (8%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP---NTIERDIMVKSKCPYIV 71
+D +K + G +G++Y K+ T +K + + M E +M + K P +V
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 77
Query: 72 NLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGY 131
L Y I E++T G+ + L ++ + +++ A++YL +
Sbjct: 78 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 137
Query: 132 VHRDIKPDNMLLSATGHLKLTDFGSA---TQVDKNGRIKSIVPVGTPEYVAPEVLEWMEG 188
+HRD+ N L+ +K+ DFG + T + P+ ++ APE L +
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI---KWTAPESLAY--- 191
Query: 189 NHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
+ ++ D+W+ GV+ +E+ T G +P+
Sbjct: 192 ----NKFSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 77/149 (51%), Gaps = 19/149 (12%)
Query: 86 IMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSA 145
++ Y+ GD + N+ H + F + ++A+ ++YL +VHRD+ N +L
Sbjct: 110 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVAKGMKYLASKKFVHRDLAARNCMLDE 168
Query: 146 TGHLKLTDFGSATQV-DK-----NGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSC 199
+K+ DFG A + DK + + + +PV +++A E L+ + +T
Sbjct: 169 KFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV---KWMALESLQ-------TQKFTTKS 218
Query: 200 DLWSIGVVSYELLT-GSTPF-NYETLDMT 226
D+WS GV+ +EL+T G+ P+ + T D+T
Sbjct: 219 DVWSFGVLLWELMTRGAPPYPDVNTFDIT 247
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 17/116 (14%)
Query: 115 YIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGT 174
Y +++A+ +++L +HRD+ N+LLS +K+ DFG A + K+
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKD----------- 192
Query: 175 PEYV----APEVLEWMEGNHGSDG-YTGSCDLWSIGVVSYELLT-GSTPFNYETLD 224
P+ V A L+WM D YT D+WS GV+ +E+ + G++P+ +D
Sbjct: 193 PDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 248
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 94/211 (44%), Gaps = 17/211 (8%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP---NTIERDIMVKSKCPYIV 71
+D +K + G +G++Y K+ T +K + + M E +M + K P +V
Sbjct: 26 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 85
Query: 72 NLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGY 131
L Y I E++T G+ + L ++ + +++ A++YL +
Sbjct: 86 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 145
Query: 132 VHRDIKPDNMLLSATGHLKLTDFGSA---TQVDKNGRIKSIVPVGTPEYVAPEVLEWMEG 188
+HRD+ N L+ +K+ DFG + T + P+ ++ APE L +
Sbjct: 146 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI---KWTAPESLAY--- 199
Query: 189 NHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
+ ++ D+W+ GV+ +E+ T G +P+
Sbjct: 200 ----NKFSIKSDVWAFGVLLWEIATYGMSPY 226
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 77/149 (51%), Gaps = 19/149 (12%)
Query: 86 IMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSA 145
++ Y+ GD + N+ H + F + ++A+ ++YL +VHRD+ N +L
Sbjct: 109 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVAKGMKYLASKKFVHRDLAARNCMLDE 167
Query: 146 TGHLKLTDFGSATQV-DK-----NGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSC 199
+K+ DFG A + DK + + + +PV +++A E L+ + +T
Sbjct: 168 KFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV---KWMALESLQ-------TQKFTTKS 217
Query: 200 DLWSIGVVSYELLT-GSTPF-NYETLDMT 226
D+WS GV+ +EL+T G+ P+ + T D+T
Sbjct: 218 DVWSFGVLLWELMTRGAPPYPDVNTFDIT 246
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 17/116 (14%)
Query: 115 YIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGT 174
Y +++A+ +++L +HRD+ N+LLS +K+ DFG A + K+
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKD----------- 192
Query: 175 PEYV----APEVLEWMEGNHGSDG-YTGSCDLWSIGVVSYELLT-GSTPFNYETLD 224
P+ V A L+WM D YT D+WS GV+ +E+ + G++P+ +D
Sbjct: 193 PDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 248
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 100/225 (44%), Gaps = 27/225 (12%)
Query: 10 KNVSASDFDIKRFIQQGNFGDIYL--VEEKQSHNTFVMKKVL------REKMPNTIERDI 61
K + S I+ I G FG++ ++ + V K L R++ E I
Sbjct: 9 KEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASI 68
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQ 121
M + + P I+ L + V + E++ G + L G + + + +A
Sbjct: 69 MGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLN-DGQFTVIQLVGMLRGIAS 127
Query: 122 AVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKN-------GRIKSIVPVGT 174
++YL + YVHRD+ N+L+++ K++DFG + +++N + +P+
Sbjct: 128 GMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPI-- 185
Query: 175 PEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
+ APE + + + +T + D WS G+V +E+++ G P+
Sbjct: 186 -RWTAPEAIAFRK-------FTSASDAWSYGIVMWEVMSFGERPY 222
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 77/149 (51%), Gaps = 19/149 (12%)
Query: 86 IMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSA 145
++ Y+ GD + N+ H + F + ++A+ ++YL +VHRD+ N +L
Sbjct: 129 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVAKGMKYLASKKFVHRDLAARNCMLDE 187
Query: 146 TGHLKLTDFGSATQV-DK-----NGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSC 199
+K+ DFG A + DK + + + +PV +++A E L+ + +T
Sbjct: 188 KFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV---KWMALESLQ-------TQKFTTKS 237
Query: 200 DLWSIGVVSYELLT-GSTPF-NYETLDMT 226
D+WS GV+ +EL+T G+ P+ + T D+T
Sbjct: 238 DVWSFGVLLWELMTRGAPPYPDVNTFDIT 266
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 77/149 (51%), Gaps = 19/149 (12%)
Query: 86 IMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSA 145
++ Y+ GD + N+ H + F + ++A+ ++YL +VHRD+ N +L
Sbjct: 110 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVAKGMKYLASKKFVHRDLAARNCMLDE 168
Query: 146 TGHLKLTDFGSATQV-DK-----NGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSC 199
+K+ DFG A + DK + + + +PV +++A E L+ + +T
Sbjct: 169 KFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV---KWMALESLQ-------TQKFTTKS 218
Query: 200 DLWSIGVVSYELLT-GSTPF-NYETLDMT 226
D+WS GV+ +EL+T G+ P+ + T D+T
Sbjct: 219 DVWSFGVLLWELMTRGAPPYPDVNTFDIT 247
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 77/149 (51%), Gaps = 19/149 (12%)
Query: 86 IMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSA 145
++ Y+ GD + N+ H + F + ++A+ ++YL +VHRD+ N +L
Sbjct: 102 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVAKGMKYLASKKFVHRDLAARNCMLDE 160
Query: 146 TGHLKLTDFGSATQV-DK-----NGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSC 199
+K+ DFG A + DK + + + +PV +++A E L+ + +T
Sbjct: 161 KFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV---KWMALESLQ-------TQKFTTKS 210
Query: 200 DLWSIGVVSYELLT-GSTPF-NYETLDMT 226
D+WS GV+ +EL+T G+ P+ + T D+T
Sbjct: 211 DVWSFGVLLWELMTRGAPPYPDVNTFDIT 239
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 94/211 (44%), Gaps = 17/211 (8%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP---NTIERDIMVKSKCPYIV 71
+D +K + G +G++Y K+ T +K + + M E +M + K P +V
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 77
Query: 72 NLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGY 131
L Y I E++T G+ + L ++ + +++ A++YL +
Sbjct: 78 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 137
Query: 132 VHRDIKPDNMLLSATGHLKLTDFGSA---TQVDKNGRIKSIVPVGTPEYVAPEVLEWMEG 188
+HRD+ N L+ +K+ DFG + T + P+ ++ APE L +
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI---KWTAPESLAY--- 191
Query: 189 NHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
+ ++ D+W+ GV+ +E+ T G +P+
Sbjct: 192 ----NKFSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 77/149 (51%), Gaps = 19/149 (12%)
Query: 86 IMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSA 145
++ Y+ GD + N+ H + F + ++A+ ++YL +VHRD+ N +L
Sbjct: 107 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVAKGMKYLASKKFVHRDLAARNCMLDE 165
Query: 146 TGHLKLTDFGSATQV-DK-----NGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSC 199
+K+ DFG A + DK + + + +PV +++A E L+ + +T
Sbjct: 166 KFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV---KWMALESLQ-------TQKFTTKS 215
Query: 200 DLWSIGVVSYELLT-GSTPF-NYETLDMT 226
D+WS GV+ +EL+T G+ P+ + T D+T
Sbjct: 216 DVWSFGVLLWELMTRGAPPYPDVNTFDIT 244
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 77/149 (51%), Gaps = 19/149 (12%)
Query: 86 IMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSA 145
++ Y+ GD + N+ H + F + ++A+ ++YL +VHRD+ N +L
Sbjct: 108 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVAKGMKYLASKKFVHRDLAARNCMLDE 166
Query: 146 TGHLKLTDFGSATQV-DK-----NGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSC 199
+K+ DFG A + DK + + + +PV +++A E L+ + +T
Sbjct: 167 KFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV---KWMALESLQ-------TQKFTTKS 216
Query: 200 DLWSIGVVSYELLT-GSTPF-NYETLDMT 226
D+WS GV+ +EL+T G+ P+ + T D+T
Sbjct: 217 DVWSFGVLLWELMTRGAPPYPDVNTFDIT 245
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 106/233 (45%), Gaps = 43/233 (18%)
Query: 23 IQQGNFG-----DIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMVKSKCPY-------I 70
+ +G FG D + +++ + T V K+L+E ++ R +M + K +
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRT-VAVKMLKEGATHSEHRALMSELKILIHIGHHLNV 95
Query: 71 VNLFYSF-QDMNHVYFIMEYVTGGDFVTLLENQ-----PH-------GYLSESKARFYIY 117
VNL + + + I+E+ G+ T L ++ P+ +L+ Y +
Sbjct: 96 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSF 155
Query: 118 ELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEY 177
++A+ +++L +HRD+ N+LLS +K+ DFG A + K+ P+
Sbjct: 156 QVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKD-----------PDX 204
Query: 178 V----APEVLEWMEGNHGSDG-YTGSCDLWSIGVVSYELLT-GSTPFNYETLD 224
V A L+WM D YT D+WS GV+ +E+ + G++P+ +D
Sbjct: 205 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 257
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 77/149 (51%), Gaps = 19/149 (12%)
Query: 86 IMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSA 145
++ Y+ GD + N+ H + F + ++A+ ++YL +VHRD+ N +L
Sbjct: 105 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVAKGMKYLASKKFVHRDLAARNCMLDE 163
Query: 146 TGHLKLTDFGSATQV-DK-----NGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSC 199
+K+ DFG A + DK + + + +PV +++A E L+ + +T
Sbjct: 164 KFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV---KWMALESLQ-------TQKFTTKS 213
Query: 200 DLWSIGVVSYELLT-GSTPF-NYETLDMT 226
D+WS GV+ +EL+T G+ P+ + T D+T
Sbjct: 214 DVWSFGVLLWELMTRGAPPYPDVNTFDIT 242
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 17/116 (14%)
Query: 115 YIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGT 174
Y +++A+ +++L +HRD+ N+LLS +K+ DFG A + K+
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKD----------- 201
Query: 175 PEYV----APEVLEWMEGNHGSDG-YTGSCDLWSIGVVSYELLT-GSTPFNYETLD 224
P+ V A L+WM D YT D+WS GV+ +E+ + G++P+ +D
Sbjct: 202 PDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 257
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 77/149 (51%), Gaps = 19/149 (12%)
Query: 86 IMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSA 145
++ Y+ GD + N+ H + F + ++A+ ++YL +VHRD+ N +L
Sbjct: 128 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVAKGMKYLASKKFVHRDLAARNCMLDE 186
Query: 146 TGHLKLTDFGSATQV-DK-----NGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSC 199
+K+ DFG A + DK + + + +PV +++A E L+ + +T
Sbjct: 187 KFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV---KWMALESLQ-------TQKFTTKS 236
Query: 200 DLWSIGVVSYELLT-GSTPF-NYETLDMT 226
D+WS GV+ +EL+T G+ P+ + T D+T
Sbjct: 237 DVWSFGVLLWELMTRGAPPYPDVNTFDIT 265
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 17/116 (14%)
Query: 115 YIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGT 174
Y +++A+ +++L +HRD+ N+LLS +K+ DFG A + K+
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKD----------- 201
Query: 175 PEYV----APEVLEWMEGNHGSDG-YTGSCDLWSIGVVSYELLT-GSTPFNYETLD 224
P+ V A L+WM D YT D+WS GV+ +E+ + G++P+ +D
Sbjct: 202 PDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 257
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 89/199 (44%), Gaps = 31/199 (15%)
Query: 25 QGNFGDIYLVEEKQSHNTFVMKKVLRE-KMPNTIERDIMVKSKCPYIVNLFYSFQDMNHV 83
Q N G++ V++ Q ++ RE ++ +++ D +VK K + YS N +
Sbjct: 34 QDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK-----GVCYSAGRRN-L 87
Query: 84 YFIMEYVTGGDFVTLLENQPHGYLSESKARF-------YIYELAQAVQYLHGLGYVHRDI 136
IMEY+ G YL + K R Y ++ + ++YL Y+HRD+
Sbjct: 88 KLIMEYLPYGSL--------RDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDL 139
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIV-PVGTPEY-VAPEVLEWMEGNHGSDG 194
N+L+ +K+ DFG + ++ + P +P + APE L
Sbjct: 140 ATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT-------ESK 192
Query: 195 YTGSCDLWSIGVVSYELLT 213
++ + D+WS GVV YEL T
Sbjct: 193 FSVASDVWSFGVVLYELFT 211
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 98/230 (42%), Gaps = 24/230 (10%)
Query: 7 LRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREK------MPNTIERD 60
LR+ V++ +F K + +G FG +Y + + + T V K L+E+ + E +
Sbjct: 30 LRELQVASDNFSNKNILGRGGFGKVY--KGRLADGTLVAVKRLKEERXQGGELQFQTEVE 87
Query: 61 IMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGY--LSESKARFYIYE 118
++ + ++ L + Y+ G + L +P L K +
Sbjct: 88 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALG 147
Query: 119 LAQAVQYLHGLG---YVHRDIKPDNMLLSATGHLKLTDFGSATQVD-KNGRIKSIVPVGT 174
A+ + YLH +HRD+K N+LL + DFG A +D K+ + V GT
Sbjct: 148 SARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVR-GT 206
Query: 175 PEYVAPEVLEWMEGNHGSDGYTG-SCDLWSIGVVSYELLTGSTPFNYETL 223
++APE L S G + D++ GV+ EL+TG F+ L
Sbjct: 207 IGHIAPEYL--------STGKSSEKTDVFGYGVMLLELITGQRAFDLARL 248
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 97/234 (41%), Gaps = 47/234 (20%)
Query: 10 KNVSASDFDIKRFIQQGNFGDIYLVEEK--QSHNTFVMKKVLREKMPNTIERD------I 61
K + A++ I + + G FG++ K V K L+ RD I
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYEL-- 119
M + P I+ L V + E + G +L + A+F + +L
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL--------DSFLRKHDAQFTVIQLVG 151
Query: 120 -----AQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFG---------SATQVDKNGR 165
A ++YL +G VHRD+ N+L+++ K++DFG A + G+
Sbjct: 152 MLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 166 IKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
I P+ + +PE + + + +T + D+WS G+V +E+++ G P+
Sbjct: 212 I----PI---RWTSPEAIAYRK-------FTSASDVWSYGIVLWEVMSYGERPY 251
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 94/211 (44%), Gaps = 17/211 (8%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP---NTIERDIMVKSKCPYIV 71
+D +K + G +G++Y K+ T +K + + M E +M + K P +V
Sbjct: 17 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 76
Query: 72 NLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGY 131
L Y I E++T G+ + L ++ + +++ A++YL +
Sbjct: 77 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 136
Query: 132 VHRDIKPDNMLLSATGHLKLTDFGSA---TQVDKNGRIKSIVPVGTPEYVAPEVLEWMEG 188
+HRD+ N L+ +K+ DFG + T + P+ ++ APE L +
Sbjct: 137 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI---KWTAPESLAY--- 190
Query: 189 NHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
+ ++ D+W+ GV+ +E+ T G +P+
Sbjct: 191 ----NKFSIKSDVWAFGVLLWEIATYGMSPY 217
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 89/193 (46%), Gaps = 19/193 (9%)
Query: 25 QGNFGDIYLVEEKQSHNTFVMKKVLRE-KMPNTIERDIMVKSKCPYIVNLFYSFQDMNHV 83
Q N G++ V++ Q ++ RE ++ +++ D +VK K + YS N +
Sbjct: 38 QDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK-----GVCYSAGRRN-L 91
Query: 84 YFIMEYVTGGDFVTLLENQPHG-YLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNML 142
IMEY+ G L Q H + K Y ++ + ++YL Y+HRD+ N+L
Sbjct: 92 KLIMEYLPYGSLRDYL--QAHAERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL 149
Query: 143 LSATGHLKLTDFGSATQVDKNGRIKSIV-PVGTPEY-VAPEVLEWMEGNHGSDGYTGSCD 200
+ +K+ DFG + ++ + P +P + APE L ++ + D
Sbjct: 150 VENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT-------ESKFSVASD 202
Query: 201 LWSIGVVSYELLT 213
+WS GVV YEL T
Sbjct: 203 VWSFGVVLYELFT 215
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 78/170 (45%), Gaps = 33/170 (19%)
Query: 70 IVNLFYSFQDMNHVYFIMEYVTGGDFVTLLE--------------NQPHGYLSESKARFY 115
IVNL + V I EY GD + L + P LS +
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHF 171
Query: 116 IYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHL-KLTDFGSATQV--DKNGRIK--SIV 170
++AQ + +L +HRD+ N+LL+ GH+ K+ DFG A + D N +K + +
Sbjct: 172 SSQVAQGMAFLASKNCIHRDVAARNVLLT-NGHVAKIGDFGLARDIMNDSNYIVKGNARL 230
Query: 171 PVGTPEYVAPE-VLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
PV +++APE + + + YT D+WS G++ +E+ + G P+
Sbjct: 231 PV---KWMAPESIFDCV--------YTVQSDVWSYGILLWEIFSLGLNPY 269
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 89/199 (44%), Gaps = 31/199 (15%)
Query: 25 QGNFGDIYLVEEKQSHNTFVMKKVLRE-KMPNTIERDIMVKSKCPYIVNLFYSFQDMNHV 83
Q N G++ V++ Q ++ RE ++ +++ D +VK K + YS N +
Sbjct: 39 QDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK-----GVCYSAGRRN-L 92
Query: 84 YFIMEYVTGGDFVTLLENQPHGYLSESKARF-------YIYELAQAVQYLHGLGYVHRDI 136
IMEY+ G YL + K R Y ++ + ++YL Y+HRD+
Sbjct: 93 KLIMEYLPYGSL--------RDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDL 144
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIV-PVGTPEY-VAPEVLEWMEGNHGSDG 194
N+L+ +K+ DFG + ++ + P +P + APE L
Sbjct: 145 ATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT-------ESK 197
Query: 195 YTGSCDLWSIGVVSYELLT 213
++ + D+WS GVV YEL T
Sbjct: 198 FSVASDVWSFGVVLYELFT 216
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 94/211 (44%), Gaps = 17/211 (8%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP---NTIERDIMVKSKCPYIV 71
+D +K + G +G++Y K+ T +K + + M E +M + K P +V
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 72
Query: 72 NLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGY 131
L Y I E++T G+ + L ++ + +++ A++YL +
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 132
Query: 132 VHRDIKPDNMLLSATGHLKLTDFGSA---TQVDKNGRIKSIVPVGTPEYVAPEVLEWMEG 188
+HRD+ N L+ +K+ DFG + T + P+ ++ APE L +
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI---KWTAPESLAY--- 186
Query: 189 NHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
+ ++ D+W+ GV+ +E+ T G +P+
Sbjct: 187 ----NKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 89/199 (44%), Gaps = 31/199 (15%)
Query: 25 QGNFGDIYLVEEKQSHNTFVMKKVLRE-KMPNTIERDIMVKSKCPYIVNLFYSFQDMNHV 83
Q N G++ V++ Q ++ RE ++ +++ D +VK K + YS N +
Sbjct: 40 QDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK-----GVCYSAGRRN-L 93
Query: 84 YFIMEYVTGGDFVTLLENQPHGYLSESKARF-------YIYELAQAVQYLHGLGYVHRDI 136
IMEY+ G YL + K R Y ++ + ++YL Y+HRD+
Sbjct: 94 KLIMEYLPYGSL--------RDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDL 145
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIV-PVGTPEY-VAPEVLEWMEGNHGSDG 194
N+L+ +K+ DFG + ++ + P +P + APE L
Sbjct: 146 ATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT-------ESK 198
Query: 195 YTGSCDLWSIGVVSYELLT 213
++ + D+WS GVV YEL T
Sbjct: 199 FSVASDVWSFGVVLYELFT 217
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 89/199 (44%), Gaps = 31/199 (15%)
Query: 25 QGNFGDIYLVEEKQSHNTFVMKKVLRE-KMPNTIERDIMVKSKCPYIVNLFYSFQDMNHV 83
Q N G++ V++ Q ++ RE ++ +++ D +VK K + YS N +
Sbjct: 38 QDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK-----GVCYSAGRRN-L 91
Query: 84 YFIMEYVTGGDFVTLLENQPHGYLSESKARF-------YIYELAQAVQYLHGLGYVHRDI 136
IMEY+ G YL + K R Y ++ + ++YL Y+HRD+
Sbjct: 92 KLIMEYLPYGSL--------RDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDL 143
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIV-PVGTPEY-VAPEVLEWMEGNHGSDG 194
N+L+ +K+ DFG + ++ + P +P + APE L
Sbjct: 144 ATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT-------ESK 196
Query: 195 YTGSCDLWSIGVVSYELLT 213
++ + D+WS GVV YEL T
Sbjct: 197 FSVASDVWSFGVVLYELFT 215
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 89/199 (44%), Gaps = 31/199 (15%)
Query: 25 QGNFGDIYLVEEKQSHNTFVMKKVLRE-KMPNTIERDIMVKSKCPYIVNLFYSFQDMNHV 83
Q N G++ V++ Q ++ RE ++ +++ D +VK K + YS N +
Sbjct: 33 QDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK-----GVCYSAGRRN-L 86
Query: 84 YFIMEYVTGGDFVTLLENQPHGYLSESKARF-------YIYELAQAVQYLHGLGYVHRDI 136
IMEY+ G YL + K R Y ++ + ++YL Y+HRD+
Sbjct: 87 KLIMEYLPYGSL--------RDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDL 138
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIV-PVGTPEY-VAPEVLEWMEGNHGSDG 194
N+L+ +K+ DFG + ++ + P +P + APE L
Sbjct: 139 ATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT-------ESK 191
Query: 195 YTGSCDLWSIGVVSYELLT 213
++ + D+WS GVV YEL T
Sbjct: 192 FSVASDVWSFGVVLYELFT 210
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 20/129 (15%)
Query: 98 LLENQPHG----YLSESKARF-------YIYELAQAVQYLHGLGYVHRDIKPDNMLLSAT 146
++E P+G YL + K R Y ++ + ++YL Y+HRD+ N+L+
Sbjct: 94 IMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENE 153
Query: 147 GHLKLTDFGSATQVDKNGRIKSIV-PVGTPEY-VAPEVLEWMEGNHGSDGYTGSCDLWSI 204
+K+ DFG + ++ + P +P + APE L ++ + D+WS
Sbjct: 154 NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT-------ESKFSVASDVWSF 206
Query: 205 GVVSYELLT 213
GVV YEL T
Sbjct: 207 GVVLYELFT 215
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 77/167 (46%), Gaps = 19/167 (11%)
Query: 58 ERDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIY 117
E ++M + PYIV + + +ME G L+ H + + ++
Sbjct: 420 EANVMQQLDNPYIVRMI-GICEAESWMLVMEMAELGPLNKYLQQNRH--VKDKNIIELVH 476
Query: 118 ELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFG--SATQVDKN---GRIKSIVPV 172
+++ ++YL +VHRD+ N+LL + K++DFG A + D+N + PV
Sbjct: 477 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 536
Query: 173 GTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
++ APE + + + ++ D+WS GV+ +E + G P+
Sbjct: 537 ---KWYAPECINYYK-------FSSKSDVWSFGVLMWEAFSYGQKPY 573
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 89/199 (44%), Gaps = 31/199 (15%)
Query: 25 QGNFGDIYLVEEKQSHNTFVMKKVLRE-KMPNTIERDIMVKSKCPYIVNLFYSFQDMNHV 83
Q N G++ V++ Q ++ RE ++ +++ D +VK K + YS N +
Sbjct: 41 QDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK-----GVCYSAGRRN-L 94
Query: 84 YFIMEYVTGGDFVTLLENQPHGYLSESKARF-------YIYELAQAVQYLHGLGYVHRDI 136
IMEY+ G YL + K R Y ++ + ++YL Y+HRD+
Sbjct: 95 KLIMEYLPYGSL--------RDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDL 146
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIV-PVGTPEY-VAPEVLEWMEGNHGSDG 194
N+L+ +K+ DFG + ++ + P +P + APE L
Sbjct: 147 ATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT-------ESK 199
Query: 195 YTGSCDLWSIGVVSYELLT 213
++ + D+WS GVV YEL T
Sbjct: 200 FSVASDVWSFGVVLYELFT 218
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 89/199 (44%), Gaps = 31/199 (15%)
Query: 25 QGNFGDIYLVEEKQSHNTFVMKKVLRE-KMPNTIERDIMVKSKCPYIVNLFYSFQDMNHV 83
Q N G++ V++ Q ++ RE ++ +++ D +VK K + YS N +
Sbjct: 35 QDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK-----GVCYSAGRRN-L 88
Query: 84 YFIMEYVTGGDFVTLLENQPHGYLSESKARF-------YIYELAQAVQYLHGLGYVHRDI 136
IMEY+ G YL + K R Y ++ + ++YL Y+HRD+
Sbjct: 89 KLIMEYLPYGSL--------RDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDL 140
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIV-PVGTPEY-VAPEVLEWMEGNHGSDG 194
N+L+ +K+ DFG + ++ + P +P + APE L
Sbjct: 141 ATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT-------ESK 193
Query: 195 YTGSCDLWSIGVVSYELLT 213
++ + D+WS GVV YEL T
Sbjct: 194 FSVASDVWSFGVVLYELFT 212
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 80/173 (46%), Gaps = 23/173 (13%)
Query: 57 IERDIMVKSKC--PYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARF 114
+R++ + S P IV L+ N +ME+V GD L ++ H K R
Sbjct: 70 FQREVFIMSNLNHPNIVKLYGLMH--NPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRL 127
Query: 115 YIYELAQAVQYLHGLG--YVHRDIKPDNMLL-----SATGHLKLTDFGSATQVDKNGRIK 167
+ ++A ++Y+ VHRD++ N+ L +A K+ DFG + Q +
Sbjct: 128 ML-DIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQ-----SVH 181
Query: 168 SIVPV-GTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFN 219
S+ + G +++APE + E + YT D +S ++ Y +LTG PF+
Sbjct: 182 SVSGLLGNFQWMAPETIGAEE-----ESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 77/149 (51%), Gaps = 19/149 (12%)
Query: 86 IMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSA 145
++ Y+ GD + N+ H + F + ++A+ +++L +VHRD+ N +L
Sbjct: 111 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVAKGMKFLASKKFVHRDLAARNCMLDE 169
Query: 146 TGHLKLTDFGSA-TQVDK-----NGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSC 199
+K+ DFG A +DK + + + +PV +++A E L+ + +T
Sbjct: 170 KFTVKVADFGLARDMLDKEFDSVHNKTGAKLPV---KWMALESLQ-------TQKFTTKS 219
Query: 200 DLWSIGVVSYELLT-GSTPF-NYETLDMT 226
D+WS GV+ +EL+T G+ P+ + T D+T
Sbjct: 220 DVWSFGVLLWELMTRGAPPYPDVNTFDIT 248
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 89/199 (44%), Gaps = 31/199 (15%)
Query: 25 QGNFGDIYLVEEKQSHNTFVMKKVLRE-KMPNTIERDIMVKSKCPYIVNLFYSFQDMNHV 83
Q N G++ V++ Q ++ RE ++ +++ D +VK K + YS N +
Sbjct: 42 QDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK-----GVCYSAGRRN-L 95
Query: 84 YFIMEYVTGGDFVTLLENQPHGYLSESKARF-------YIYELAQAVQYLHGLGYVHRDI 136
IMEY+ G YL + K R Y ++ + ++YL Y+HRD+
Sbjct: 96 KLIMEYLPYGSL--------RDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDL 147
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIV-PVGTPEY-VAPEVLEWMEGNHGSDG 194
N+L+ +K+ DFG + ++ + P +P + APE L
Sbjct: 148 ATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT-------ESK 200
Query: 195 YTGSCDLWSIGVVSYELLT 213
++ + D+WS GVV YEL T
Sbjct: 201 FSVASDVWSFGVVLYELFT 219
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 89/199 (44%), Gaps = 31/199 (15%)
Query: 25 QGNFGDIYLVEEKQSHNTFVMKKVLRE-KMPNTIERDIMVKSKCPYIVNLFYSFQDMNHV 83
Q N G++ V++ Q ++ RE ++ +++ D +VK K + YS N +
Sbjct: 35 QDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK-----GVCYSAGRRN-L 88
Query: 84 YFIMEYVTGGDFVTLLENQPHGYLSESKARF-------YIYELAQAVQYLHGLGYVHRDI 136
IMEY+ G YL + K R Y ++ + ++YL Y+HRD+
Sbjct: 89 KLIMEYLPYGSL--------RDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDL 140
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIV-PVGTPEY-VAPEVLEWMEGNHGSDG 194
N+L+ +K+ DFG + ++ + P +P + APE L
Sbjct: 141 ATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT-------ESK 193
Query: 195 YTGSCDLWSIGVVSYELLT 213
++ + D+WS GVV YEL T
Sbjct: 194 FSVASDVWSFGVVLYELFT 212
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 80/183 (43%), Gaps = 31/183 (16%)
Query: 70 IVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARF--------------- 114
IVNL + I EY GD + L + ++ +
Sbjct: 105 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 164
Query: 115 -YIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQV--DKNGRIK--SI 169
+ Y++A+ + +L +HRD+ N+LL+ K+ DFG A + D N +K +
Sbjct: 165 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNAR 224
Query: 170 VPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPFNYETLDMTYS 228
+PV +++APE + + YT D+WS G+ +EL + GS+P+ +D +
Sbjct: 225 LPV---KWMAPESIF-------NCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY 274
Query: 229 SIL 231
++
Sbjct: 275 KMI 277
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 94/211 (44%), Gaps = 17/211 (8%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP---NTIERDIMVKSKCPYIV 71
+D +K + G +G++Y K+ T +K + + M E +M + K P +V
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 72
Query: 72 NLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGY 131
L Y I E++T G+ + L ++ + +++ A++YL +
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 132
Query: 132 VHRDIKPDNMLLSATGHLKLTDFGSA---TQVDKNGRIKSIVPVGTPEYVAPEVLEWMEG 188
+HRD+ N L+ +K+ DFG + T + P+ ++ APE L +
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI---KWTAPESLAY--- 186
Query: 189 NHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
+ ++ D+W+ GV+ +E+ T G +P+
Sbjct: 187 ----NKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 17/116 (14%)
Query: 115 YIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGT 174
Y +++A+ +++L +HRD+ N+LLS +K+ DFG A + K+
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD----------- 201
Query: 175 PEYV----APEVLEWMEGNHGSDG-YTGSCDLWSIGVVSYELLT-GSTPFNYETLD 224
P+ V A L+WM D YT D+WS GV+ +E+ + G++P+ +D
Sbjct: 202 PDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 257
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 77/167 (46%), Gaps = 19/167 (11%)
Query: 58 ERDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIY 117
E ++M + PYIV + + +ME G L+ H + + ++
Sbjct: 421 EANVMQQLDNPYIVRMI-GICEAESWMLVMEMAELGPLNKYLQQNRH--VKDKNIIELVH 477
Query: 118 ELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFG--SATQVDKN---GRIKSIVPV 172
+++ ++YL +VHRD+ N+LL + K++DFG A + D+N + PV
Sbjct: 478 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 537
Query: 173 GTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
++ APE + + + ++ D+WS GV+ +E + G P+
Sbjct: 538 ---KWYAPECINYYK-------FSSKSDVWSFGVLMWEAFSYGQKPY 574
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 46/229 (20%)
Query: 15 SDFDIKRFIQQGNFGDIY---LVEEKQSHNTFVMKKVLREKMPNTIERDIMVKSKCPYIV 71
++F + + G FG +Y + E + V K LRE ++I+ ++ Y++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA---YVM 73
Query: 72 NLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHG----YLSESKARF-------YIYELA 120
+ D HV ++ +++ P G Y+ E K + ++A
Sbjct: 74 ----ASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 129
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVD--------KNGRIKSIVPV 172
+ + YL VHRD+ N+L+ H+K+TDFG A + + G+ VP+
Sbjct: 130 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK----VPI 185
Query: 173 GTPEYVAPE-VLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPFN 219
+++A E +L + YT D+WS GV +EL+T GS P++
Sbjct: 186 ---KWMALESILHRI--------YTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 80/168 (47%), Gaps = 31/168 (18%)
Query: 70 IVNLFYSFQDMNHVYFIMEYVTGGDFVT-------LLENQP-----HGYLSESKARFYIY 117
IVNL + V I EY GD + +LE P + LS +
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSS 171
Query: 118 ELAQAVQYLHGLGYVHRDIKPDNMLLSATGHL-KLTDFGSATQV--DKNGRIK--SIVPV 172
++AQ + +L +HRD+ N+LL+ GH+ K+ DFG A + D N +K + +PV
Sbjct: 172 QVAQGMAFLASKNCIHRDVAARNVLLT-NGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 230
Query: 173 GTPEYVAPE-VLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
+++APE + + + YT D+WS G++ +E+ + G P+
Sbjct: 231 ---KWMAPESIFDCV--------YTVQSDVWSYGILLWEIFSLGLNPY 267
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 20/129 (15%)
Query: 98 LLENQPHG----YLSESKARF-------YIYELAQAVQYLHGLGYVHRDIKPDNMLLSAT 146
++E P+G YL + K R Y ++ + ++YL Y+HRD+ N+L+
Sbjct: 122 IMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENE 181
Query: 147 GHLKLTDFGSATQVDKNGRIKSIV-PVGTPEY-VAPEVLEWMEGNHGSDGYTGSCDLWSI 204
+K+ DFG + ++ + P +P + APE L ++ + D+WS
Sbjct: 182 NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT-------ESKFSVASDVWSF 234
Query: 205 GVVSYELLT 213
GVV YEL T
Sbjct: 235 GVVLYELFT 243
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 77/149 (51%), Gaps = 19/149 (12%)
Query: 86 IMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSA 145
++ Y+ GD + N+ H + F + ++A+ +++L +VHRD+ N +L
Sbjct: 108 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVAKGMKFLASKKFVHRDLAARNCMLDE 166
Query: 146 TGHLKLTDFGSATQV-DK-----NGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSC 199
+K+ DFG A + DK + + + +PV +++A E L+ + +T
Sbjct: 167 KFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV---KWMALESLQ-------TQKFTTKS 216
Query: 200 DLWSIGVVSYELLT-GSTPF-NYETLDMT 226
D+WS GV+ +EL+T G+ P+ + T D+T
Sbjct: 217 DVWSFGVLLWELMTRGAPPYPDVNTFDIT 245
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 20/129 (15%)
Query: 98 LLENQPHG----YLSESKARF-------YIYELAQAVQYLHGLGYVHRDIKPDNMLLSAT 146
++E P+G YL + K R Y ++ + ++YL Y+HRD+ N+L+
Sbjct: 91 IMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENE 150
Query: 147 GHLKLTDFGSATQVDKNGRIKSIV-PVGTPEY-VAPEVLEWMEGNHGSDGYTGSCDLWSI 204
+K+ DFG + ++ + P +P + APE L ++ + D+WS
Sbjct: 151 NRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLT-------ESKFSVASDVWSF 203
Query: 205 GVVSYELLT 213
GVV YEL T
Sbjct: 204 GVVLYELFT 212
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 95/225 (42%), Gaps = 32/225 (14%)
Query: 17 FDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDI---MVKSKC------ 67
F + R + +G FG + + KQ +FV V K DI + ++ C
Sbjct: 25 FTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDH 84
Query: 68 PYIVNLF-YSFQD-----MNHVYFIMEYVTGGDFVTLL------ENQPHGYLSESKARFY 115
P++ L S + + I+ ++ GD L EN P ++ RF
Sbjct: 85 PHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGEN-PFNLPLQTLVRFM 143
Query: 116 IYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTP 175
+ ++A ++YL ++HRD+ N +L+ + + DFG + ++ + P
Sbjct: 144 V-DIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLP 202
Query: 176 EYVAPEVLEWMEGNHGSDG-YTGSCDLWSIGVVSYELLT-GSTPF 218
++W+ +D YT D+W+ GV +E++T G TP+
Sbjct: 203 -------VKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPY 240
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 46/229 (20%)
Query: 15 SDFDIKRFIQQGNFGDIY---LVEEKQSHNTFVMKKVLREKMPNTIERDIMVKSKCPYIV 71
++F + + G FG +Y + E + V K LRE ++I+ ++ Y++
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA---YVM 75
Query: 72 NLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHG----YLSESKARF-------YIYELA 120
+ D HV ++ +++ P G Y+ E K + ++A
Sbjct: 76 ----ASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 131
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVD--------KNGRIKSIVPV 172
+ + YL VHRD+ N+L+ H+K+TDFG A + + G+ VP+
Sbjct: 132 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK----VPI 187
Query: 173 GTPEYVAPE-VLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPFN 219
+++A E +L + YT D+WS GV +EL+T GS P++
Sbjct: 188 ---KWMALESILHRI--------YTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 46/229 (20%)
Query: 15 SDFDIKRFIQQGNFGDIY---LVEEKQSHNTFVMKKVLREKMPNTIERDIMVKSKCPYIV 71
++F + + G FG +Y + E + V K LRE ++I+ ++ Y++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA---YVM 73
Query: 72 NLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHG----YLSESKARF-------YIYELA 120
+ D HV ++ +++ P G Y+ E K + ++A
Sbjct: 74 ----ASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 129
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVD--------KNGRIKSIVPV 172
+ + YL VHRD+ N+L+ H+K+TDFG A + + G+ VP+
Sbjct: 130 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK----VPI 185
Query: 173 GTPEYVAPE-VLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPFN 219
+++A E +L + YT D+WS GV +EL+T GS P++
Sbjct: 186 ---KWMALESILHRI--------YTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 65/148 (43%), Gaps = 19/148 (12%)
Query: 85 FIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLH-----GLGY----VHRD 135
+MEY G L ++S + + + + + YLH G Y HRD
Sbjct: 89 LVMEYYPNGSLXKYLSLHTSDWVSSCR---LAHSVTRGLAYLHTELPRGDHYKPAISHRD 145
Query: 136 IKPDNMLLSATGHLKLTDFGSATQVDKNGRIK-------SIVPVGTPEYVAPEVLEWMEG 188
+ N+L+ G ++DFG + ++ N ++ +I VGT Y+APEVLE
Sbjct: 146 LNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVN 205
Query: 189 NHGSDGYTGSCDLWSIGVVSYELLTGST 216
+ D++++G++ +E+ T
Sbjct: 206 LRDXESALKQVDMYALGLIYWEIFMRCT 233
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 20/129 (15%)
Query: 98 LLENQPHG----YLSESKARF-------YIYELAQAVQYLHGLGYVHRDIKPDNMLLSAT 146
++E P+G YL + K R Y ++ + ++YL Y+HRD+ N+L+
Sbjct: 109 IMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENE 168
Query: 147 GHLKLTDFGSATQVDKNGRIKSIV-PVGTPEY-VAPEVLEWMEGNHGSDGYTGSCDLWSI 204
+K+ DFG + ++ + P +P + APE L ++ + D+WS
Sbjct: 169 NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT-------ESKFSVASDVWSF 221
Query: 205 GVVSYELLT 213
GVV YEL T
Sbjct: 222 GVVLYELFT 230
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 77/149 (51%), Gaps = 19/149 (12%)
Query: 86 IMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSA 145
++ Y+ GD + N+ H + F + ++A+ +++L +VHRD+ N +L
Sbjct: 110 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVAKGMKFLASKKFVHRDLAARNCMLDE 168
Query: 146 TGHLKLTDFGSATQV-DK-----NGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSC 199
+K+ DFG A + DK + + + +PV +++A E L+ + +T
Sbjct: 169 KFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV---KWMALESLQ-------TQKFTTKS 218
Query: 200 DLWSIGVVSYELLT-GSTPF-NYETLDMT 226
D+WS GV+ +EL+T G+ P+ + T D+T
Sbjct: 219 DVWSFGVLLWELMTRGAPPYPDVNTFDIT 247
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 98/219 (44%), Gaps = 19/219 (8%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP---NTIERDIMVKSKCPYIV 71
+D +K + G +G++Y K+ T +K + + M E +M + K P +V
Sbjct: 217 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 276
Query: 72 NLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGY 131
L Y I E++T G+ + L ++ + +++ A++YL +
Sbjct: 277 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 336
Query: 132 VHRDIKPDNMLLSATGHLKLTDFGSA---TQVDKNGRIKSIVPVGTPEYVAPEVLEWMEG 188
+HR++ N L+ +K+ DFG + T + P+ ++ APE L +
Sbjct: 337 IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI---KWTAPESLAY--- 390
Query: 189 NHGSDGYTGSCDLWSIGVVSYELLT-GSTPFNYETLDMT 226
+ ++ D+W+ GV+ +E+ T G +P Y +D++
Sbjct: 391 ----NKFSIKSDVWAFGVLLWEIATYGMSP--YPGIDLS 423
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 98/219 (44%), Gaps = 19/219 (8%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP---NTIERDIMVKSKCPYIV 71
+D +K + G +G++Y K+ T +K + + M E +M + K P +V
Sbjct: 259 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 318
Query: 72 NLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGY 131
L Y I E++T G+ + L ++ + +++ A++YL +
Sbjct: 319 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 378
Query: 132 VHRDIKPDNMLLSATGHLKLTDFGSA---TQVDKNGRIKSIVPVGTPEYVAPEVLEWMEG 188
+HR++ N L+ +K+ DFG + T + P+ ++ APE L +
Sbjct: 379 IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI---KWTAPESLAY--- 432
Query: 189 NHGSDGYTGSCDLWSIGVVSYELLT-GSTPFNYETLDMT 226
+ ++ D+W+ GV+ +E+ T G +P Y +D++
Sbjct: 433 ----NKFSIKSDVWAFGVLLWEIATYGMSP--YPGIDLS 465
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 77/167 (46%), Gaps = 19/167 (11%)
Query: 58 ERDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIY 117
E ++M + PYIV + + +ME G L+ H + + ++
Sbjct: 78 EANVMQQLDNPYIVRMI-GICEAESWMLVMEMAELGPLNKYLQQNRH--VKDKNIIELVH 134
Query: 118 ELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFG--SATQVDKN---GRIKSIVPV 172
+++ ++YL +VHRD+ N+LL + K++DFG A + D+N + PV
Sbjct: 135 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 194
Query: 173 GTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
++ APE + + + ++ D+WS GV+ +E + G P+
Sbjct: 195 ---KWYAPECINYYK-------FSSKSDVWSFGVLMWEAFSYGQKPY 231
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 77/167 (46%), Gaps = 19/167 (11%)
Query: 58 ERDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIY 117
E ++M + PYIV + + +ME G L+ H + + ++
Sbjct: 78 EANVMQQLDNPYIVRMI-GICEAESWMLVMEMAELGPLNKYLQQNRH--VKDKNIIELVH 134
Query: 118 ELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFG--SATQVDKN---GRIKSIVPV 172
+++ ++YL +VHRD+ N+LL + K++DFG A + D+N + PV
Sbjct: 135 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 194
Query: 173 GTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
++ APE + + + ++ D+WS GV+ +E + G P+
Sbjct: 195 ---KWYAPECINYYK-------FSSKSDVWSFGVLMWEAFSYGQKPY 231
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 77/167 (46%), Gaps = 19/167 (11%)
Query: 58 ERDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIY 117
E ++M + PYIV + + +ME G L+ H + + ++
Sbjct: 68 EANVMQQLDNPYIVRMI-GICEAESWMLVMEMAELGPLNKYLQQNRH--VKDKNIIELVH 124
Query: 118 ELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFG--SATQVDKN---GRIKSIVPV 172
+++ ++YL +VHRD+ N+LL + K++DFG A + D+N + PV
Sbjct: 125 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 184
Query: 173 GTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
++ APE + + + ++ D+WS GV+ +E + G P+
Sbjct: 185 ---KWYAPECINYYK-------FSSKSDVWSFGVLMWEAFSYGQKPY 221
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 77/149 (51%), Gaps = 19/149 (12%)
Query: 86 IMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSA 145
++ Y+ GD + N+ H + F + ++A+ +++L +VHRD+ N +L
Sbjct: 111 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVAKGMKFLASKKFVHRDLAARNCMLDE 169
Query: 146 TGHLKLTDFGSATQV-DK-----NGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSC 199
+K+ DFG A + DK + + + +PV +++A E L+ + +T
Sbjct: 170 KFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV---KWMALESLQ-------TQKFTTKS 219
Query: 200 DLWSIGVVSYELLT-GSTPF-NYETLDMT 226
D+WS GV+ +EL+T G+ P+ + T D+T
Sbjct: 220 DVWSFGVLLWELMTRGAPPYPDVNTFDIT 248
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 69/145 (47%), Gaps = 30/145 (20%)
Query: 81 NHVYFIMEYVTGGDFVTLLENQPHGYLSESKARF-------YIYELAQAVQYLHGLGYVH 133
N + IME++ G +L E YL ++K + Y ++ + + YL YVH
Sbjct: 98 NGIKLIMEFLPSG---SLKE-----YLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVH 149
Query: 134 RDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSI-----VPVGTPEYVAPEVLEWMEG 188
RD+ N+L+ + +K+ DFG ++ + ++ PV + APE L M+
Sbjct: 150 RDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPV---FWYAPECL--MQ- 203
Query: 189 NHGSDGYTGSCDLWSIGVVSYELLT 213
S Y S D+WS GV +ELLT
Sbjct: 204 ---SKFYIAS-DVWSFGVTLHELLT 224
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 72/153 (47%), Gaps = 15/153 (9%)
Query: 70 IVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGL 129
+V L+ ++ I EY+ G + L H + ++ ++ +A++YL
Sbjct: 66 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLESK 124
Query: 130 GYVHRDIKPDNMLLSATGHLKLTDFGSATQV---DKNGRIKSIVPVGTPEYVAPEVLEWM 186
++HRD+ N L++ G +K++DFG + V + S PV + PEVL +
Sbjct: 125 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPV---RWSPPEVLMYS 181
Query: 187 EGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
+ ++ D+W+ GV+ +E+ + G P+
Sbjct: 182 K-------FSSKSDIWAFGVLMWEIYSLGKMPY 207
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 77/167 (46%), Gaps = 19/167 (11%)
Query: 58 ERDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIY 117
E ++M + PYIV + + +ME G L+ H + + ++
Sbjct: 76 EANVMQQLDNPYIVRMI-GICEAESWMLVMEMAELGPLNKYLQQNRH--VKDKNIIELVH 132
Query: 118 ELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFG--SATQVDKN---GRIKSIVPV 172
+++ ++YL +VHRD+ N+LL + K++DFG A + D+N + PV
Sbjct: 133 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 192
Query: 173 GTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
++ APE + + + ++ D+WS GV+ +E + G P+
Sbjct: 193 ---KWYAPECINYYK-------FSSKSDVWSFGVLMWEAFSYGQKPY 229
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 20/129 (15%)
Query: 98 LLENQPHG----YLSESKARF-------YIYELAQAVQYLHGLGYVHRDIKPDNMLLSAT 146
++E P+G YL + K R Y ++ + ++YL Y+HRD+ N+L+
Sbjct: 109 IMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENE 168
Query: 147 GHLKLTDFGSATQVDKNGRIKSIV-PVGTPEY-VAPEVLEWMEGNHGSDGYTGSCDLWSI 204
+K+ DFG + ++ + P +P + APE L ++ + D+WS
Sbjct: 169 NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT-------ESKFSVASDVWSF 221
Query: 205 GVVSYELLT 213
GVV YEL T
Sbjct: 222 GVVLYELFT 230
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 46/229 (20%)
Query: 15 SDFDIKRFIQQGNFGDIY---LVEEKQSHNTFVMKKVLREKMPNTIERDIMVKSKCPYIV 71
++F + + G FG +Y + E + V K LRE ++I+ ++ Y++
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA---YVM 78
Query: 72 NLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHG----YLSESKARF-------YIYELA 120
+ D HV ++ +++ P G Y+ E K + ++A
Sbjct: 79 ----ASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 134
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVD--------KNGRIKSIVPV 172
+ + YL VHRD+ N+L+ H+K+TDFG A + + G+ VP+
Sbjct: 135 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK----VPI 190
Query: 173 GTPEYVAPE-VLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPFN 219
+++A E +L + YT D+WS GV +EL+T GS P++
Sbjct: 191 ---KWMALESILHRI--------YTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 103/229 (44%), Gaps = 37/229 (16%)
Query: 7 LRQKNVSASDFDIKRFIQQGNFG----DIYLVEEKQSHNTFVMKKVLREKMPNTIERDIM 62
L++ N+ +D ++ GNFG +Y + +KQ V KVL++ ++M
Sbjct: 332 LKRDNLLIADIELG----CGNFGSVRQGVYRMRKKQID---VAIKVLKQGTEKADTEEMM 384
Query: 63 VKSKC------PYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLL----ENQPHGYLSESKA 112
+++ PYIV L Q + +ME GG L E P ++E
Sbjct: 385 REAQIMHQLDNPYIVRLIGVCQ-AEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAE--- 440
Query: 113 RFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPV 172
+++++ ++YL +VHR++ N+LL + K++DFG + + + +
Sbjct: 441 --LLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSA 498
Query: 173 G--TPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
G ++ APE + + + ++ D+WS GV +E L+ G P+
Sbjct: 499 GKWPLKWYAPECINFRK-------FSSRSDVWSYGVTMWEALSYGQKPY 540
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 75/170 (44%), Gaps = 31/170 (18%)
Query: 70 IVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARF--------------- 114
IVNL + I EY GD + L + ++ +
Sbjct: 112 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 171
Query: 115 -YIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQV--DKNGRIK--SI 169
+ Y++A+ + +L +HRD+ N+LL+ K+ DFG A + D N +K +
Sbjct: 172 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNAR 231
Query: 170 VPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
+PV +++APE + + YT D+WS G+ +EL + GS+P+
Sbjct: 232 LPV---KWMAPESIF-------NCVYTFESDVWSYGIFLWELFSLGSSPY 271
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 77/149 (51%), Gaps = 19/149 (12%)
Query: 86 IMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSA 145
++ Y+ GD + N+ H + F + ++A+ +++L +VHRD+ N +L
Sbjct: 115 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVAKGMKFLASKKFVHRDLAARNCMLDE 173
Query: 146 TGHLKLTDFGSATQV-DK-----NGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSC 199
+K+ DFG A + DK + + + +PV +++A E L+ + +T
Sbjct: 174 KFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV---KWMALESLQ-------TQKFTTKS 223
Query: 200 DLWSIGVVSYELLT-GSTPF-NYETLDMT 226
D+WS GV+ +EL+T G+ P+ + T D+T
Sbjct: 224 DVWSFGVLLWELMTRGAPPYPDVNTFDIT 252
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 77/149 (51%), Gaps = 19/149 (12%)
Query: 86 IMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSA 145
++ Y+ GD + N+ H + F + ++A+ +++L +VHRD+ N +L
Sbjct: 110 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVAKGMKFLASKKFVHRDLAARNCMLDE 168
Query: 146 TGHLKLTDFGSATQV-DK-----NGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSC 199
+K+ DFG A + DK + + + +PV +++A E L+ + +T
Sbjct: 169 KFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV---KWMALESLQ-------TQKFTTKS 218
Query: 200 DLWSIGVVSYELLT-GSTPF-NYETLDMT 226
D+WS GV+ +EL+T G+ P+ + T D+T
Sbjct: 219 DVWSFGVLLWELMTRGAPPYPDVNTFDIT 247
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.311 0.128 0.349
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,220,374
Number of Sequences: 62578
Number of extensions: 860602
Number of successful extensions: 5515
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1069
Number of HSP's successfully gapped in prelim test: 169
Number of HSP's that attempted gapping in prelim test: 2451
Number of HSP's gapped (non-prelim): 1400
length of query: 792
length of database: 14,973,337
effective HSP length: 107
effective length of query: 685
effective length of database: 8,277,491
effective search space: 5670081335
effective search space used: 5670081335
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 55 (25.8 bits)