RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy13735
(792 letters)
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase,
ATP-BI nucleotide-binding, cardiac contractility, muscle
different; HET: BI8; 2.80A {Homo sapiens}
Length = 412
Score = 298 bits (765), Expect = 8e-94
Identities = 112/357 (31%), Positives = 177/357 (49%), Gaps = 28/357 (7%)
Query: 1 KDVVKELRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKK------VLREKMP 54
+ +V L++ + DF+I + I +G F ++ +V+ KQ+ + MK + R ++
Sbjct: 47 EPIVVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVS 106
Query: 55 NTI-ERDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKAR 113
ERD++V +I L ++FQD N++Y +MEY GGD +TLL + AR
Sbjct: 107 CFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGE-RIPAEMAR 165
Query: 114 FYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVG 173
FY+ E+ A+ +H LGYVHRDIKPDN+LL GH++L DFGS ++ +G ++S+V VG
Sbjct: 166 FYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVG 225
Query: 174 TPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILAC 233
TP+Y++PE+L+ + G G+ Y CD W++GV +YE+ G TPF ++ TY I+
Sbjct: 226 TPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIV-- 283
Query: 234 DTEDTVSFPSS-IRLSTAMVNFVQSLVQKLDARL---NMDQVLGHPVFDCLD------SD 283
++ +S P + +F+Q L+ + RL HP F LD S
Sbjct: 284 HYKEHLSLPLVDEGVPEEARDFIQRLLCPPETRLGRGGAGDFRTHPFFFGLDWDGLRDSV 343
Query: 284 PPCIPPPSQEN------KFHKKDKRKASPSLKAFQKEGRYLDSA--LPLIGISYTGE 332
PP P S + LP +G SY+
Sbjct: 344 PPFTPDFEGATDTCNFDLVEDGLTAMVSGGGETLSDIREGAPLGVHLPFVGYSYSCM 400
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase,
inhibitor, transf transferase inhibitor complex; HET:
0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A*
2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A*
2h9v_A*
Length = 410
Score = 291 bits (747), Expect = 4e-91
Identities = 117/369 (31%), Positives = 190/369 (51%), Gaps = 39/369 (10%)
Query: 1 KDVVKELRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKK------VLREKMP 54
KD + ++R + A D+++ + I +G FG++ LV K + + MK + R
Sbjct: 55 KDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSA 114
Query: 55 NTI-ERDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKAR 113
ERDIM + P++V LFY+FQD ++Y +MEY+ GGD V L+ N + E AR
Sbjct: 115 FFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD---VPEKWAR 171
Query: 114 FYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVG 173
FY E+ A+ +H +G++HRD+KPDNMLL +GHLKL DFG+ +++K G ++ VG
Sbjct: 172 FYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVG 231
Query: 174 TPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILAC 233
TP+Y++PEVL + G Y CD WS+GV YE+L G TPF ++L TYS I+
Sbjct: 232 TPDYISPEVL---KSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNH 288
Query: 234 DTEDTVSFPSSIRLSTAMVNFVQSLVQKLDARL---NMDQVLGHPVFDCLD--------S 282
+++++FP +S N + + + + RL ++++ H F +
Sbjct: 289 --KNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQWAWETLRDT 346
Query: 283 DPPCIPPPSQE-------NKFHKKDKRKASPSLKAFQKEGRYLDSALPLIGISYTGEPMG 335
P +P S + + K + + P KAF LP +G +Y
Sbjct: 347 VAPVVPDLSSDIDTSNFDDLEEDKGEEETFPIPKAFVGN------QLPFVGFTYYSNRRY 400
Query: 336 ANTNTSSDS 344
++ +D+
Sbjct: 401 LSSANPNDN 409
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA;
HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Length = 437
Score = 291 bits (746), Expect = 1e-90
Identities = 121/375 (32%), Positives = 195/375 (52%), Gaps = 25/375 (6%)
Query: 1 KDVVKELRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKK------VLREKMP 54
K +++Q + DF+I + I +G FG++ +V+ K + F MK + R +
Sbjct: 60 KPFTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETA 119
Query: 55 NTI-ERDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKAR 113
ERD++V +I L Y+FQD N++Y +M+Y GGD +TLL + L E AR
Sbjct: 120 CFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLS-KFEDRLPEEMAR 178
Query: 114 FYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVG 173
FY+ E+ A+ +H L YVHRDIKPDN+L+ GH++L DFGS ++ ++G ++S V VG
Sbjct: 179 FYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVG 238
Query: 174 TPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILAC 233
TP+Y++PE+L+ MEG G Y CD WS+GV YE+L G TPF E+L TY I+
Sbjct: 239 TPDYISPEILQAMEGGKG--RYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM-- 294
Query: 234 DTEDTVSFPSSI-RLSTAMVNFVQSLVQKLDARL---NMDQVLGHPVFDCLD------SD 283
+ ++ FP+ + +S + ++ L+ + RL ++ HP F +D +
Sbjct: 295 NHKERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGIDWDNIRNCE 354
Query: 284 PPCIPPPSQEN---KFHKKDKRKASPSLKAFQKEGRYLDSALPLIGISYTGEPMGANTNT 340
P IP S F D + + LP +G +YT + ++ +
Sbjct: 355 APYIPEVSSPTDTSNFDVDDDCLKNSETMPPPTHTAFSGHHLPFVGFTYTSSCVLSDRSC 414
Query: 341 SSDSTLPPSSEDMRH 355
+ P S+E++
Sbjct: 415 LRVTAGPTSAENLYF 429
>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB,
inhibitor, LY333531, diabetes, cancer, transferase,
serine/threonine-protein kinase; HET: SEP LY4; 1.7A
{Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A*
1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A*
3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A*
3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ...
Length = 310
Score = 241 bits (617), Expect = 1e-73
Identities = 80/291 (27%), Positives = 137/291 (47%), Gaps = 34/291 (11%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK-----KVLREK-MPNT-IERD 60
+ + DF + + +G+F + L E + + +K +++E +P ERD
Sbjct: 23 QPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERD 82
Query: 61 IMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELA 120
+M + P+ V L+++FQD +YF + Y G+ + + G E+ RFY E+
Sbjct: 83 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIV 140
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSA---TQVDKNGRIKSIVPVGTPEY 177
A++YLHG G +HRD+KP+N+LL+ H+++TDFG+A + K R S VGT +Y
Sbjct: 141 SALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSF--VGTAQY 198
Query: 178 VAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTED 237
V+PE+L S DLW++G + Y+L+ G PF + + I+ +
Sbjct: 199 VSPELLT-------EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE--- 248
Query: 238 TVSFPSSIRLSTAMVNFVQSLVQK-LDARL------NMDQVLGHPVFDCLD 281
FP + V+ L+ RL + HP F+ +
Sbjct: 249 -YDFPEK--FFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVT 296
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics,
structural genomics consortium, SGC, TR; HET: STU; 2.29A
{Homo sapiens}
Length = 384
Score = 242 bits (621), Expect = 3e-73
Identities = 90/306 (29%), Positives = 153/306 (50%), Gaps = 34/306 (11%)
Query: 9 QKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTF---VMKK---VLREKMPNTI-ERDI 61
++V+ F+I R I +G+FG + +V++ + + M K V R ++ N E I
Sbjct: 9 NEDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQI 68
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQ 121
M + P++VNL+YSFQD ++ +++ + GGD L Q + + E + +I EL
Sbjct: 69 MQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHL--QQNVHFKEETVKLFICELVM 126
Query: 122 AVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPE 181
A+ YL +HRD+KPDN+LL GH+ +TDF A + + +I ++ GT Y+APE
Sbjct: 127 ALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTM--AGTKPYMAPE 184
Query: 182 VLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF---NYETLDMTYSSILACDTEDT 238
+ +G GY+ + D WS+GV +YELL G P+ + + +
Sbjct: 185 MFSSRKGA----GYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFE----TTV 236
Query: 239 VSFPSSIRLSTAMVNFVQSLVQK-LDARL-NMDQVLGHPVFDCLDSD--------PPCIP 288
V++PS+ S MV+ ++ L++ D R + V P + ++ D P IP
Sbjct: 237 VTYPSA--WSQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMNDINWDAVFQKRLIPGFIP 294
Query: 289 PPSQEN 294
+ N
Sbjct: 295 NKGRLN 300
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding,
serine/threonine-protein kinase, ATP-binding,
transferase, coiled coil, cell division, kinase; HET:
TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A*
3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A*
3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A*
2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Length = 284
Score = 239 bits (612), Expect = 3e-73
Identities = 83/300 (27%), Positives = 140/300 (46%), Gaps = 28/300 (9%)
Query: 4 VKELRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK-----KVLREKMPNTI- 57
+ E+ ++ + DFDI R + +G FG++YL EKQ+ +K ++ +E + + +
Sbjct: 3 LAEMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLR 62
Query: 58 -ERDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYI 116
E +I + P I+ ++ F D +Y ++E+ G+ L Q HG E ++ ++
Sbjct: 63 REIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL--QKHGRFDEQRSATFM 120
Query: 117 YELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPE 176
ELA A+ Y H +HRDIKP+N+L+ G LK+ DFG + R GT +
Sbjct: 121 EELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRTM---CGTLD 177
Query: 177 YVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTE 236
Y+ PE++E + DLW GV+ YE L G PF+ + T+ I+ D
Sbjct: 178 YLPPEMIE-------GKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVD-- 228
Query: 237 DTVSFPSSIRLSTAMVNFVQSLVQK-LDARLNMDQVLGHPVF--DCLDSDPPCIPPPSQE 293
+ FP LS + + L++ RL + V+ HP + PP +
Sbjct: 229 --LKFPPF--LSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSRRVLPPVYQSTQSK 284
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors,
virtual screening, X-RAY CO- crystal analysis,
structure-based drug design (SBDD); HET: MMH; 1.90A
{Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A*
2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A*
3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A*
3lau_A* 2wtv_A* ...
Length = 279
Score = 234 bits (598), Expect = 3e-71
Identities = 84/276 (30%), Positives = 131/276 (47%), Gaps = 26/276 (9%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK-----KVLREKMPNTI--ERD 60
+++ + DF+I R + +G FG++YL EKQS +K ++ + + + + E +
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 61 IMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELA 120
I + P I+ L+ F D VY I+EY G L Q E + YI ELA
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELA 119
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAP 180
A+ Y H +HRDIKP+N+LL + G LK+ DFG + + R GT +Y+ P
Sbjct: 120 NALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDL---CGTLDYLPP 176
Query: 181 EVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVS 240
E++E + DLWS+GV+ YE L G PF T TY I + +
Sbjct: 177 EMIE-------GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE----FT 225
Query: 241 FPSSIRLSTAMVNFVQSLVQK-LDARLNMDQVLGHP 275
FP + + + + L++ R + +VL HP
Sbjct: 226 FPDFV--TEGARDLISRLLKHNPSQRPMLREVLEHP 259
>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of
P90 ribosomal S6 kinase 2, ATP- binding,
nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus
musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A*
Length = 325
Score = 229 bits (587), Expect = 5e-69
Identities = 94/290 (32%), Positives = 155/290 (53%), Gaps = 33/290 (11%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTF------VMKK---VLREKMPNTIE 58
+ S F++ + + QG+FG ++LV++ + V+KK +R+++ +E
Sbjct: 17 GHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKME 76
Query: 59 RDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYE 118
RDI+V+ P+IV L Y+FQ +Y I++++ GGD T L + +E +FY+ E
Sbjct: 77 RDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKE--VMFTEEDVKFYLAE 134
Query: 119 LAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFG-SATQVDKNGRIKSIVPVGTPEY 177
LA A+ +LH LG ++RD+KP+N+LL GH+KLTDFG S +D + S GT EY
Sbjct: 135 LALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF--CGTVEY 192
Query: 178 VAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTED 237
+APEV+ G+T S D WS GV+ +E+LTG+ PF + T + IL +
Sbjct: 193 MAPEVVN-------RRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMIL----KA 241
Query: 238 TVSFPSSIRLSTAMVNFVQSLVQKL-DARL-----NMDQVLGHPVFDCLD 281
+ P LS + ++ L ++ RL ++++ H F +D
Sbjct: 242 KLGMPQF--LSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTID 289
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open
conformation, transferase; HET: TPO; 2.80A
{Saccharomyces cerevisiae} SCOP: d.144.1.7
Length = 318
Score = 228 bits (584), Expect = 1e-68
Identities = 92/299 (30%), Positives = 148/299 (49%), Gaps = 40/299 (13%)
Query: 12 VSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK-----KVLREK-MPNTI-ERDIMVK 64
S DF I R + G+FG ++L+ + + + MK V+R K + +T ER ++
Sbjct: 3 YSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSI 62
Query: 65 SKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQ 124
P+I+ ++ +FQD ++ IM+Y+ GG+ +LL A+FY E+ A++
Sbjct: 63 VTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKS--QRFPNPVAKFYAAEVCLALE 120
Query: 125 YLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLE 184
YLH ++RD+KP+N+LL GH+K+TDFG A V ++ GTP+Y+APEV+
Sbjct: 121 YLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVP--DVTYTL--CGTPDYIAPEVVS 176
Query: 185 WMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSS 244
+ Y S D WS G++ YE+L G TPF TY IL + + FP
Sbjct: 177 -------TKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAE----LRFPPF 225
Query: 245 IRLSTAMVNFVQSLVQK-LDARL-NM----DQVLGHPVFDCLDSD--------PPCIPP 289
+ + + + L+ + L RL N+ + V HP F + + P PP
Sbjct: 226 --FNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVWEKLLSRNIETPYEPP 282
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive,
active, ribosomal S6 kinase, activation, alternative
initiation, ATP-binding; HET: TPO STU; 2.35A {Homo
sapiens} PDB: 3a61_A* 3a60_A*
Length = 327
Score = 227 bits (580), Expect = 5e-68
Identities = 88/293 (30%), Positives = 151/293 (51%), Gaps = 37/293 (12%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNT---FVMKKVLREKM----PNTI--- 57
+ + F++ R + +G +G ++ V + NT F MK VL++ M
Sbjct: 10 GPEKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMK-VLKKAMIVRNAKDTAHT 68
Query: 58 --ERDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFY 115
ER+I+ + K P+IV+L Y+FQ +Y I+EY++GG+ LE + G E A FY
Sbjct: 69 KAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLERE--GIFMEDTACFY 126
Query: 116 IYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFG-SATQVDKNGRIKSIVPVGT 174
+ E++ A+ +LH G ++RD+KP+N++L+ GH+KLTDFG + + GT
Sbjct: 127 LAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTF--CGT 184
Query: 175 PEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACD 234
EY+APE+L G+ + D WS+G + Y++LTG+ PF E T IL
Sbjct: 185 IEYMAPEILM-------RSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKIL--- 234
Query: 235 TEDTVSFPSSIRLSTAMVNFVQSLVQKL-DARL-----NMDQVLGHPVFDCLD 281
+ ++ P L+ + ++ L+++ +RL + +V HP F ++
Sbjct: 235 -KCKLNLPPY--LTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHIN 284
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU;
CAMP-dependent protein kinase,catalytic mechanism, ATP
hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A
{Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E*
1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A*
1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A*
3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Length = 350
Score = 227 bits (581), Expect = 6e-68
Identities = 96/303 (31%), Positives = 158/303 (52%), Gaps = 40/303 (13%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK-----KVLREK-MPNTI-ERD 60
Q FD + + G+FG + LV+ K+S N + MK KV++ K + +T+ E+
Sbjct: 34 SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 61 IMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELA 120
I+ P++V L +SF+D +++Y +MEYV GG+ + L G SE ARFY ++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIV 151
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAP 180
+YLH L ++RD+KP+N+L+ G++++TDFG A +V GR ++ GTPE +AP
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWTL--CGTPEALAP 207
Query: 181 EVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVS 240
E++ S GY + D W++GV+ YE+ G PF + Y I++ V
Sbjct: 208 EIIL-------SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK----VR 256
Query: 241 FPSSIRLSTAMVNFVQSLVQK-LDARL-NM----DQVLGHPVFDCLD--------SDPPC 286
FPS S+ + + +++L+Q L R N+ + + H F D + P
Sbjct: 257 FPSHF--SSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
Query: 287 IPP 289
IP
Sbjct: 315 IPK 317
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase;
HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7
PDB: 2jed_A*
Length = 345
Score = 224 bits (572), Expect = 1e-66
Identities = 81/286 (28%), Positives = 145/286 (50%), Gaps = 30/286 (10%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVL-------REKMPNTI-ER 59
Q + DF + + + +G+FG ++L E K+++ F +K L + + T+ E+
Sbjct: 10 LQIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIK-ALKKDVVLMDDDVECTMVEK 68
Query: 60 DIMVKS-KCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYE 118
++ + + P++ ++F +FQ +++F+MEY+ GGD + + Q S+A FY E
Sbjct: 69 RVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI--QSCHKFDLSRATFYAAE 126
Query: 119 LAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFG-SATQVDKNGRIKSIVPVGTPEY 177
+ +Q+LH G V+RD+K DN+LL GH+K+ DFG + + + + GTP+Y
Sbjct: 127 IILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTF--CGTPDY 184
Query: 178 VAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTED 237
+APE+L Y S D WS GV+ YE+L G +PF+ + + + SI D
Sbjct: 185 IAPEILL-------GQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIR----MD 233
Query: 238 TVSFPSSIRLSTAMVNFVQSLVQK-LDARL-NMDQVLGHPVFDCLD 281
+P L + + L + + RL + HP+F ++
Sbjct: 234 NPFYPRW--LEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREIN 277
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase,
apoptosis, ATP-binding, cytoplasm, endoplasmic
reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A
{Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Length = 373
Score = 224 bits (574), Expect = 1e-66
Identities = 88/289 (30%), Positives = 148/289 (51%), Gaps = 33/289 (11%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKM-------PNTI-ER 59
+ SDF + I +G+FG + L K + +K VL++K + + ER
Sbjct: 31 SNPHAKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVK-VLQKKAILKKKEEKHIMSER 89
Query: 60 DIMVKS-KCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYE 118
++++K+ K P++V L +SFQ + +YF+++Y+ GG+ L+ + E +ARFY E
Sbjct: 90 NVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRE--RCFLEPRARFYAAE 147
Query: 119 LAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFG-SATQVDKNGRIKSIVPVGTPEY 177
+A A+ YLH L V+RD+KP+N+LL + GH+ LTDFG ++ N + GTPEY
Sbjct: 148 IASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTF--CGTPEY 205
Query: 178 VAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTED 237
+APEVL Y + D W +G V YE+L G PF Y +IL
Sbjct: 206 LAPEVLH-------KQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNIL----NK 254
Query: 238 TVSFPSSIRLSTAMVNFVQSLVQK-----LDARLNMDQVLGHPVFDCLD 281
+ + ++ + + ++ L+QK L A+ + ++ H F ++
Sbjct: 255 PLQLKPN--ITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLIN 301
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase,
transferase, serine/threonine-protein kinase; HET: TPO
ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A*
2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A*
3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A
1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Length = 337
Score = 222 bits (569), Expect = 3e-66
Identities = 86/284 (30%), Positives = 151/284 (53%), Gaps = 31/284 (10%)
Query: 12 VSASDFDIKRFIQQGNFGDIYLVEEKQSHNTF---VMKK---VLREKMPNTI-ERDIMVK 64
V+ +DFD + + +G FG + LV EK + + +++K + ++++ +T+ E ++
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 65 SKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQ 124
++ P++ L Y+FQ + + F+MEY GG+ L + +E +ARFY E+ A++
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALE 119
Query: 125 YLHGLGYVHRDIKPDNMLLSATGHLKLTDFG-SATQVDKNGRIKSIVPVGTPEYVAPEVL 183
YLH V+RDIK +N++L GH+K+TDFG + +K+ GTPEY+APEVL
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTF--CGTPEYLAPEVL 177
Query: 184 EWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPS 243
E + Y + D W +GVV YE++ G PF + + + IL + + FP
Sbjct: 178 E-------DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL----MEEIRFPR 226
Query: 244 SIRLSTAMVNFVQSLVQKL-DARL-----NMDQVLGHPVFDCLD 281
+ LS + + L++K RL + +V+ H F ++
Sbjct: 227 T--LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSIN 268
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase,
transferase-transferase inhibito; HET: TPO 07U; 2.05A
{Homo sapiens}
Length = 353
Score = 218 bits (557), Expect = 2e-64
Identities = 85/290 (29%), Positives = 142/290 (48%), Gaps = 33/290 (11%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTF---VMKK---VLREKMPNTI-ERD 60
+ +F+ R + +G+FG + L K++ + + V+KK + + + T+ E+
Sbjct: 16 SSNRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKR 75
Query: 61 IMVK-SKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYEL 119
I+ P++ LF FQ + ++F+ME+V GGD + ++ E++ARFY E+
Sbjct: 76 ILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKS--RRFDEARARFYAAEI 133
Query: 120 AQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFG-SATQVDKNGRIKSIVPVGTPEYV 178
A+ +LH G ++RD+K DN+LL GH KL DFG + + GTP+Y+
Sbjct: 134 ISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATF--CGTPDYI 191
Query: 179 APEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDT 238
APE+L+ Y + D W++GV+ YE+L G PF E D + +IL D
Sbjct: 192 APEILQ-------EMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAIL----NDE 240
Query: 239 VSFPSSIRLSTAMVNFVQSLVQKL-DARL------NMDQVLGHPVFDCLD 281
V +P+ L ++S + K RL +L HP F +D
Sbjct: 241 VVYPTW--LHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEID 288
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase,
transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB:
3iw4_A*
Length = 353
Score = 218 bits (557), Expect = 2e-64
Identities = 85/289 (29%), Positives = 141/289 (48%), Gaps = 32/289 (11%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTF---VMKK---VLREKMPNTI-ERD 60
+ + +DF+ + +G+FG + L E K + + ++KK + + + T+ E+
Sbjct: 13 NRDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKR 72
Query: 61 IMVK-SKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYEL 119
++ K P++ L FQ M+ +YF+MEYV GGD + ++ G E A FY E+
Sbjct: 73 VLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQV--GRFKEPHAVFYAAEI 130
Query: 120 AQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFG-SATQVDKNGRIKSIVPVGTPEYV 178
A + +L G ++RD+K DN++L + GH+K+ DFG + K+ GTP+Y+
Sbjct: 131 AIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTF--CGTPDYI 188
Query: 179 APEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDT 238
APE++ Y S D W+ GV+ YE+L G PF E D + SI+ E
Sbjct: 189 APEIIA-------YQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIM----EHN 237
Query: 239 VSFPSSIRLSTAMVNFVQSLVQKL-DARL-----NMDQVLGHPVFDCLD 281
V++P S +S V + L+ K RL + H F +D
Sbjct: 238 VAYPKS--MSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYID 284
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase,
phosphorylation, serine/threonine protein kinase; 1.8A
{Homo sapiens} SCOP: d.144.1.7
Length = 355
Score = 218 bits (557), Expect = 2e-64
Identities = 83/299 (27%), Positives = 152/299 (50%), Gaps = 41/299 (13%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNT---FVMKKVLR--------EKMPNT 56
+ V +F++ + + G +G ++LV + H+T + MK VL+ + +T
Sbjct: 47 HAEKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMK-VLKKATIVQKAKTTEHT 105
Query: 57 I-ERDIMVK-SKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARF 114
ER ++ + P++V L Y+FQ ++ I++Y+ GG+ T L + +E + +
Sbjct: 106 RTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQR--ERFTEHEVQI 163
Query: 115 YIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQ--VDKNGRIKSIVPV 172
Y+ E+ A+++LH LG ++RDIK +N+LL + GH+ LTDFG + + D+ R
Sbjct: 164 YVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDF--C 221
Query: 173 GTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMT----YS 228
GT EY+AP+++ + G+ + D WS+GV+ YELLTG++PF + +
Sbjct: 222 GTIEYMAPDIVRGGD-----SGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISR 276
Query: 229 SILACDTEDTVSFPSSIRLSTAMVNFVQSLVQK-LDARL-----NMDQVLGHPVFDCLD 281
IL + +P +S + +Q L+ K RL + D++ H F ++
Sbjct: 277 RIL----KSEPPYPQE--MSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKIN 329
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP;
2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Length = 576
Score = 222 bits (568), Expect = 9e-64
Identities = 85/380 (22%), Positives = 159/380 (41%), Gaps = 40/380 (10%)
Query: 5 KELRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKK------VLREKMPNTI- 57
K L ++ V+ + F R + +G FG++ + + + + KK R+ +
Sbjct: 174 KWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALN 233
Query: 58 ERDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIY 117
E+ I+ K ++V+L Y+++ + + ++ + GGD + + E++A FY
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAA 293
Query: 118 ELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEY 177
E+ ++ LH V+RD+KP+N+LL GH++++D G A V + IK VGT Y
Sbjct: 294 EICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR--VGTVGY 351
Query: 178 VAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTED 237
+APEV++ ++ YT S D W++G + YE++ G +PF + + E
Sbjct: 352 MAPEVVK-------NERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV 404
Query: 238 TVSFPSSIRLSTAMVNFVQSLVQK-LDARL-----NMDQVLGHPVFDCLD--------SD 283
+ S + L+ K RL + +V HP+F L+ +
Sbjct: 405 PEEYSER--FSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGAGMLE 462
Query: 284 PPCIPPPSQEN--------KFHKKDKRKASPSLKAFQKEGRYLDSALPLIGISYTGEPMG 335
PP P P +F + P+ + F ++ +P E
Sbjct: 463 PPFKPDPQAIYCKDVLDIEQFSTVKGVELEPTDQDFYQKFATGSVPIPWQNEMVETECFQ 522
Query: 336 ANTNTSSDSTLPPSSEDMRH 355
D ++PP +
Sbjct: 523 ELNVFGLDGSVPPDLDWKGQ 542
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo
sapiens} PDB: 3a8w_A* 1zrz_A*
Length = 345
Score = 214 bits (546), Expect = 5e-63
Identities = 90/298 (30%), Positives = 144/298 (48%), Gaps = 42/298 (14%)
Query: 9 QKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTF---VMKK---VLREKMPNTI-ERDI 61
+ DFD+ R I +G++ + LV K++ + V+KK E + E+ +
Sbjct: 3 MDPLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHV 62
Query: 62 MVK-SKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELA 120
+ S P++V L FQ + ++F++EYV GGD + + Q L E ARFY E++
Sbjct: 63 FEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHM--QRQRKLPEEHARFYSAEIS 120
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFG-SATQVDKNGRIKSIVPVGTPEYVA 179
A+ YLH G ++RD+K DN+LL + GH+KLTD+G + + GTP Y+A
Sbjct: 121 LALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTF--CGTPNYIA 178
Query: 180 PEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNY---------ETLDMTYSSI 230
PE+L + Y S D W++GV+ +E++ G +PF+ T D + I
Sbjct: 179 PEILR-------GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI 231
Query: 231 LACDTEDTVSFPSSIRLSTAMVNFVQSLVQKL-DARL------NMDQVLGHPVFDCLD 281
L E + P S LS + ++S + K RL + GHP F +D
Sbjct: 232 L----EKQIRIPRS--LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVD 283
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci
inhibitory kinase; structural genomics, structural
genomics consortium, SGC; 1.70A {Homo sapiens}
Length = 311
Score = 212 bits (541), Expect = 1e-62
Identities = 60/280 (21%), Positives = 110/280 (39%), Gaps = 31/280 (11%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP-----NTI-ERDI 61
R ++ F + G++G+++ V K+ + +K+ + + E
Sbjct: 50 RPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGS 109
Query: 62 MVK-SKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELA 120
K + P V L ++++ +Y E G E L E++ Y+ +
Sbjct: 110 HEKVGQHPCCVRLEQAWEEGGILYLQTELC-GPSLQQHCEAWGA-SLPEAQVWGYLRDTL 167
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAP 180
A+ +LH G VH D+KP N+ L G KL DFG ++ G + G P Y+AP
Sbjct: 168 LALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQ--EGDPRYMAP 225
Query: 181 EVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTG-STPFNYETLDMTYSSILACDTEDTV 239
E+L+ Y + D++S+G+ E+ P E L
Sbjct: 226 ELLQ--------GSYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYLP------P 271
Query: 240 SFPSSIRLSTAMVNFVQSLVQKLD--ARLNMDQVLGHPVF 277
F + LS+ + + + +++ D R + +L PV
Sbjct: 272 EFTAG--LSSELRSVLVMMLEP-DPKLRATAEALLALPVL 308
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein
coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl
ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB:
3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Length = 543
Score = 218 bits (557), Expect = 2e-62
Identities = 77/324 (23%), Positives = 144/324 (44%), Gaps = 43/324 (13%)
Query: 5 KELRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKK------VLREKMPNTI- 57
K L + + F R + +G FG+++ + K + + KK R+ +
Sbjct: 175 KWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMV 234
Query: 58 ERDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGD--FVTLLENQPHGYLSESKARFY 115
E+ I+ K +IV+L Y+F+ + +M + GGD + ++ + E +A FY
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 116 IYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQ-VDKNGRIKSIVPVGT 174
++ +++LH ++RD+KP+N+LL G+++++D G A + + K GT
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY--AGT 352
Query: 175 PEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYE----TLDMTYSSI 230
P ++APE+L + Y S D +++GV YE++ PF +
Sbjct: 353 PGFMAPELLL-------GEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRV 405
Query: 231 LACDTEDTVSFPSSIRLSTAMVNFVQSLVQK-LDARL-----NMDQVLGHPVFDCLD--- 281
L E V++P S A +F ++L+QK + RL + D + HP+F +
Sbjct: 406 L----EQAVTYPDK--FSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQ 459
Query: 282 -----SDPPCIPPPSQENKFHKKD 300
PP +P + +D
Sbjct: 460 LEAGMLTPPFVPDSRTVYAKNIQD 483
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition,
allosteric inhibitor, kinase inhibitor hydrophobic
collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB:
3o96_A*
Length = 446
Score = 215 bits (549), Expect = 3e-62
Identities = 88/301 (29%), Positives = 153/301 (50%), Gaps = 35/301 (11%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTF---VMKK---VLREKMPNTI-ERD 60
+ V+ ++F+ + + +G FG + LV+EK + + ++KK V ++++ +T+ E
Sbjct: 141 PKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENR 200
Query: 61 IMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELA 120
++ S+ P++ L YSFQ + + F+MEY GG+ L + SE +ARFY E+
Sbjct: 201 VLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIV 258
Query: 121 QAVQYLHG-LGYVHRDIKPDNMLLSATGHLKLTDFG-SATQVDKNGRIKSIVPVGTPEYV 178
A+ YLH V+RD+K +N++L GH+K+TDFG + +K+ GTPEY+
Sbjct: 259 SALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTF--CGTPEYL 316
Query: 179 APEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDT 238
APEVLE + Y + D W +GVV YE++ G PF + + + IL +
Sbjct: 317 APEVLE-------DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL----MEE 365
Query: 239 VSFPSSIRLSTAMVNFVQSLVQK-LDARL-----NMDQVLGHPVFDCLDSDP---PCIPP 289
+ FP + L + + L++K RL + +++ H F + + P
Sbjct: 366 IRFPRT--LGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSP 423
Query: 290 P 290
P
Sbjct: 424 P 424
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1,
selectivity residues, POLO-like K structure based drug
design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo
sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A*
3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A*
3db6_A* 3dbe_A* 3dbf_A*
Length = 294
Score = 208 bits (532), Expect = 1e-61
Identities = 77/288 (26%), Positives = 126/288 (43%), Gaps = 33/288 (11%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK-----KVLREKMPNTIERDIMVKSKC--P 68
+ RF+ +G F + + + + F K +L+ + +I +
Sbjct: 16 RYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ 75
Query: 69 YIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHG 128
++V F+D + V+ ++E + L + L+E +AR+Y+ ++ QYLH
Sbjct: 76 HVVGFHGFFEDNDFVFVVLELCRRRSLLELHKR--RKALTEPEARYYLRQIVLGCQYLHR 133
Query: 129 LGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEG 188
+HRD+K N+ L+ +K+ DFG AT+V+ +G K V GTP Y+APEVL
Sbjct: 134 NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKK-VLCGTPNYIAPEVLS---- 188
Query: 189 NHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRLS 248
G++ D+WSIG + Y LL G PF L TY I + S P I
Sbjct: 189 ---KKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNE----YSIPKHINPV 241
Query: 249 TAMVNFVQSLVQKL-----DARLNMDQVLGHPVFDCLDSDPPCIPPPS 291
SL+QK+ AR ++++L F P +P
Sbjct: 242 ------AASLIQKMLQTDPTARPTINELLNDEFFTS-GYIPARLPITC 282
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like
kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB:
2ou7_A* 3fc2_A* 3thb_A*
Length = 335
Score = 209 bits (534), Expect = 2e-61
Identities = 79/302 (26%), Positives = 131/302 (43%), Gaps = 33/302 (10%)
Query: 4 VKELRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK-----KVLREKMPNTIE 58
+ E+ S + RF+ +G F + + + + F K +L+ +
Sbjct: 30 IPEVLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMS 89
Query: 59 RDIMVKSKC--PYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYI 116
+I + ++V F+D + V+ ++E + L + L+E +AR+Y+
Sbjct: 90 MEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELH--KRRKALTEPEARYYL 147
Query: 117 YELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPE 176
++ QYLH +HRD+K N+ L+ +K+ DFG AT+V+ +G K V GTP
Sbjct: 148 RQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKK-VLCGTPN 206
Query: 177 YVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTE 236
Y+APEVL G++ D+WSIG + Y LL G PF L TY I +
Sbjct: 207 YIAPEVLS-------KKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNE-- 257
Query: 237 DTVSFPSSIRLSTAMVNFVQSLVQKL-----DARLNMDQVLGHPVFDCLDSDPPCIPPPS 291
S P I + SL+QK+ AR ++++L F P +P
Sbjct: 258 --YSIPKHI--NPV----AASLIQKMLQTDPTARPTINELLNDEFFTS-GYIPARLPITC 308
Query: 292 QE 293
Sbjct: 309 LT 310
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity,
atypical PKC, trans transferase substrate complex; HET:
TPO ADE; 2.40A {Mus musculus}
Length = 396
Score = 211 bits (539), Expect = 2e-61
Identities = 90/299 (30%), Positives = 145/299 (48%), Gaps = 42/299 (14%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTF---VMKK---VLREKMPNTI-ERD 60
++ DFD+ R I +G++ + LV K++ + V+KK E + E+
Sbjct: 45 ASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKH 104
Query: 61 IMVK-SKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYEL 119
+ + S P++V L FQ + ++F++EYV GGD + + Q L E ARFY E+
Sbjct: 105 VFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHM--QRQRKLPEEHARFYSAEI 162
Query: 120 AQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFG-SATQVDKNGRIKSIVPVGTPEYV 178
+ A+ YLH G ++RD+K DN+LL + GH+KLTD+G + + GTP Y+
Sbjct: 163 SLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTF--CGTPNYI 220
Query: 179 APEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNY---------ETLDMTYSS 229
APE+L + Y S D W++GV+ +E++ G +PF+ T D +
Sbjct: 221 APEILR-------GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQV 273
Query: 230 ILACDTEDTVSFPSSIRLSTAMVNFVQSLVQKL-DARL------NMDQVLGHPVFDCLD 281
IL E + P S LS + ++S + K RL + GHP F +D
Sbjct: 274 IL----EKQIRIPRS--LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVD 326
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation,
transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus}
PDB: 1tbn_A 1tbo_A 2e73_A
Length = 674
Score = 217 bits (555), Expect = 3e-61
Identities = 90/309 (29%), Positives = 146/309 (47%), Gaps = 40/309 (12%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTF---VMKK---VLREKMPNTI-ERD 60
+ + +DF+ + +G+FG + L E K + + ++KK + + + T+ E+
Sbjct: 334 NRDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKR 393
Query: 61 IMVK-SKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYEL 119
++ K P++ L FQ M+ +YF+MEYV GGD + + Q G E A FY E+
Sbjct: 394 VLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHI--QQVGRFKEPHAVFYAAEI 451
Query: 120 AQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFG-SATQVDKNGRIKSIVPVGTPEYV 178
A + +L G ++RD+K DN++L + GH+K+ DFG + K+ GTP+Y+
Sbjct: 452 AIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTF--CGTPDYI 509
Query: 179 APEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDT 238
APE++ Y S D W+ GV+ YE+L G PF E D + SI+ E
Sbjct: 510 APEIIA-------YQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIM----EHN 558
Query: 239 VSFPSSIRLSTAMVNFVQSLVQKL-DARL-----NMDQVLGHPVFDCLDSD--------P 284
V++P S +S V + L+ K RL + H F +D + P
Sbjct: 559 VAYPKS--MSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQP 616
Query: 285 PCIPPPSQE 293
P P S
Sbjct: 617 PYKPKASGR 625
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK,
STK18, PSI, structural genomics, protein structure
initiative; HET: ANP; 2.25A {Homo sapiens}
Length = 278
Score = 207 bits (528), Expect = 3e-61
Identities = 68/275 (24%), Positives = 131/275 (47%), Gaps = 33/275 (12%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK-----KVLREKMPNTIERDIMVKSKC--P 68
DF + + +G+F +Y E + +K + + M ++ ++ + + P
Sbjct: 12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHP 71
Query: 69 YIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHG 128
I+ L+ F+D N+VY ++E G+ L+N+ SE++AR +++++ + YLH
Sbjct: 72 SILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRV-KPFSENEARHFMHQIITGMLYLHS 130
Query: 129 LGYVHRDIKPDNMLLSATGHLKLTDFG-SATQVDKNGRIKSIVPVGTPEYVAPEVLEWME 187
G +HRD+ N+LL+ ++K+ DFG + + + ++ GTP Y++PE+
Sbjct: 131 HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTL--CGTPNYISPEIAT--- 185
Query: 188 GNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRL 247
+ D+WS+G + Y LL G PF+ +T+ T + ++ D PS +
Sbjct: 186 ----RSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLAD----YEMPSFL-- 235
Query: 248 STAMVNFVQSLVQKL-----DARLNMDQVLGHPVF 277
S + L+ +L RL++ VL HP
Sbjct: 236 SIE----AKDLIHQLLRRNPADRLSLSSVLDHPFM 266
>3pvu_A Beta-adrenergic receptor kinase 1; transferase,
serine/threonine-protein kinase, ATP-binding, I
membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A*
3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A*
1bak_A
Length = 695
Score = 215 bits (550), Expect = 2e-60
Identities = 87/320 (27%), Positives = 146/320 (45%), Gaps = 44/320 (13%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKK------VLREKMPNTI-ERD 60
+++ +DF + R I +G FG++Y + + + MK +++ + ER
Sbjct: 182 LNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERI 241
Query: 61 IMVK---SKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIY 117
++ CP+IV + Y+F + + FI++ + GGD L HG SE+ RFY
Sbjct: 242 MLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQ--HGVFSEADMRFYAA 299
Query: 118 ELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEY 177
E+ ++++H V+RD+KP N+LL GH++++D G A K + + VGT Y
Sbjct: 300 EIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSK-KKPHAS--VGTHGY 356
Query: 178 VAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF---NYETLDMTYSSILACD 234
+APEVL+ Y S D +S+G + ++LL G +PF + L
Sbjct: 357 MAPEVLQ------KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL--- 407
Query: 235 TEDTVSFPSSIRLSTAMVNFVQSLVQK-LDARL-----NMDQVLGHPVFDCLD------- 281
V P S S + + ++ L+Q+ ++ RL +V P F LD
Sbjct: 408 -TMAVELPDS--FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQ 464
Query: 282 -SDPPCIPPPSQENKFHKKD 300
PP IPP + N D
Sbjct: 465 KYPPPLIPPRGEVNAADAFD 484
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase;
1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A
2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Length = 321
Score = 201 bits (514), Expect = 9e-59
Identities = 85/325 (26%), Positives = 149/325 (45%), Gaps = 40/325 (12%)
Query: 4 VKELRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNT------- 56
++ +Q+ V +DI + G F + EK + + K + + + +
Sbjct: 2 MEPFKQQKVE-DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSRE 60
Query: 57 -IER--DIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGD-FVTLLENQPHGYLSESKA 112
IER I+ + ++ L +++ V I+E V+GG+ F L + LSE +A
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK---ESLSEEEA 117
Query: 113 RFYIYELAQAVQYLHGLGYVHRDIKPDNMLL----SATGHLKLTDFGSATQVDKNGRIKS 168
+I ++ V YLH H D+KP+N++L H+KL DFG A +++ K+
Sbjct: 118 TSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN 177
Query: 169 IVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYS 228
I GTPE+VAPE++ + D+WSIGV++Y LL+G++PF +T T +
Sbjct: 178 I--FGTPEFVAPEIVN-------YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 228
Query: 229 SILACDTEDTVSFPSSI--RLSTAMVNFVQS-LVQKLDARLNMDQVLGHPVFDCLDSDPP 285
+I + F S +F++ LV++ RL + + L HP +D+
Sbjct: 229 NITSVS----YDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQA 284
Query: 286 CIPPPSQEN-----KFHKKDKRKAS 305
+ S N K + + + K S
Sbjct: 285 MVRRESVVNLENFRKQYVRRRWKLS 309
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics,
parasitology, structural genomics consortium, SGC,
ATP-binding, nucleotide-binding; HET: ANP; 2.55A
{Toxoplasma gondii}
Length = 285
Score = 199 bits (509), Expect = 2e-58
Identities = 78/282 (27%), Positives = 130/282 (46%), Gaps = 31/282 (10%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIER-----DIM 62
Q + F KR + G FGD++LVEE+ S V+K + +++ +E+ +++
Sbjct: 16 FQGTID-DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVL 74
Query: 63 VKSKCPYIVNLFYSFQDMNHVYFIMEYVTGG---DFVTLLENQPHGYLSESKARFYIYEL 119
P I+ +F F+D +++Y +ME GG + + + LSE + ++
Sbjct: 75 KSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERI-VSAQARGKALSEGYVAELMKQM 133
Query: 120 AQAVQYLHGLGYVHRDIKPDNMLLSAT---GHLKLTDFGSATQVDKNGRIKSIVPVGTPE 176
A+ Y H VH+D+KP+N+L T +K+ DFG A + + GT
Sbjct: 134 MNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNA--AGTAL 191
Query: 177 YVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTE 236
Y+APEV + T CD+WS GVV Y LLTG PF +L+ +
Sbjct: 192 YMAPEVFK--------RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKE-- 241
Query: 237 DTVSFPSSIR-LSTAMVNFVQSLVQKLD--ARLNMDQVLGHP 275
++ R L+ V+ ++ ++ K D R + QVL H
Sbjct: 242 --PNYAVECRPLTPQAVDLLKQMLTK-DPERRPSAAQVLHHE 280
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase,
serine/threonine-protein, ATP-binding,
calmodulin-binding; HET: ATP; 2.20A {Oryctolagus
cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Length = 298
Score = 199 bits (507), Expect = 4e-58
Identities = 71/279 (25%), Positives = 123/279 (44%), Gaps = 28/279 (10%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMVK---------- 64
+++ K + +G + K + + +K + + ++
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 65 ----SKCPYIVNLFYSFQDMNHVYFIMEYVTGGD-FVTLLENQPHGYLSESKARFYIYEL 119
S P I+ L +++ + + + + G+ F L E LSE + R + L
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE---KVTLSEKETRKIMRAL 133
Query: 120 AQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVA 179
+ + LH L VHRD+KP+N+LL ++KLTDFG + Q+D +++ + GTP Y+A
Sbjct: 134 LEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREV--CGTPSYLA 191
Query: 180 PEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTV 239
PE++E N GY D+WS GV+ Y LL GS PF + + I++ +
Sbjct: 192 PEIIE-CSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGN----Y 246
Query: 240 SFPSSI--RLSTAMVNFVQS-LVQKLDARLNMDQVLGHP 275
F S S + + V LV + R ++ L HP
Sbjct: 247 QFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHP 285
>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo
sapiens}
Length = 350
Score = 200 bits (511), Expect = 6e-58
Identities = 73/329 (22%), Positives = 136/329 (41%), Gaps = 29/329 (8%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPN------TIERDIMVKSKCPY 69
+ + I +G+FG LV+ + +V+K++ +M + E ++ K P
Sbjct: 25 KYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPN 84
Query: 70 IVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGL 129
IV SF++ +Y +M+Y GGD + Q E + + ++ A++++H
Sbjct: 85 IVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR 144
Query: 130 GYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGN 189
+HRDIK N+ L+ G ++L DFG A ++ + +GTP Y++PE+ E
Sbjct: 145 KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARAC-IGTPYYLSPEICE----- 198
Query: 190 HGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRLST 249
+ Y D+W++G V YEL T F ++ I++ P S+ S
Sbjct: 199 --NKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFP-----PVSLHYSY 251
Query: 250 AMVNFVQSLVQKL-DARLNMDQVLGHPVF---------DCLDSDPPCIPPPSQENKFHKK 299
+ + V L ++ R +++ +L L ++ C+ S+
Sbjct: 252 DLRSLVSQLFKRNPRDRPSVNSILEKGFIAKRIEKFLSPQLIAEEFCLKTFSKFGSQPIP 311
Query: 300 DKRKASPSLKAFQKEGRYLDSALPLIGIS 328
KR AS + + GI
Sbjct: 312 AKRPASGQNSISVMPAQKITKPAAKYGIP 340
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3,
ZIP kinase, ZIPK, DAP kinase like kinase, DLK,
structural genomics consortium; HET: 7CP; 1.24A {Homo
sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A*
3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A*
3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A*
3dgk_A ...
Length = 283
Score = 197 bits (504), Expect = 8e-58
Identities = 76/277 (27%), Positives = 135/277 (48%), Gaps = 34/277 (12%)
Query: 17 FDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNT--------IER--DIMVKSK 66
+++ + G F + +K + + K + + ++ ++ IER +I+ + +
Sbjct: 7 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR 66
Query: 67 CPYIVNLFYSFQDMNHVYFIMEYVTGGD-FVTLLENQPHGYLSESKARFYIYELAQAVQY 125
P I+ L F++ V I+E V+GG+ F L E L+E +A ++ ++ V Y
Sbjct: 67 HPNIITLHDIFENKTDVVLILELVSGGELFDFLAE---KESLTEDEATQFLKQILDGVHY 123
Query: 126 LHGLGYVHRDIKPDNMLLSAT----GHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPE 181
LH H D+KP+N++L +KL DFG A +++ K+I GTPE+VAPE
Sbjct: 124 LHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNI--FGTPEFVAPE 181
Query: 182 VLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSF 241
++ + + D+WSIGV++Y LL+G++PF ET T ++I A + F
Sbjct: 182 IVNY-------EPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVN----YDF 230
Query: 242 PSSI--RLSTAMVNFVQSLVQK-LDARLNMDQVLGHP 275
S +F++ L+ K R+ + Q L H
Sbjct: 231 DEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHS 267
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit;
HET: MES; 2.60A {Homo sapiens}
Length = 326
Score = 198 bits (505), Expect = 2e-57
Identities = 84/329 (25%), Positives = 147/329 (44%), Gaps = 38/329 (11%)
Query: 7 LRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNT--------IE 58
RQ+NV +D + G F + EK + + K + + + ++ IE
Sbjct: 4 FRQENVD-DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE 62
Query: 59 R--DIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGD-FVTLLENQPHGYLSESKARFY 115
R I+ + + P ++ L +++ V I+E V GG+ F L E L+E +A +
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE---KESLTEEEATEF 119
Query: 116 IYELAQAVQYLHGLGYVHRDIKPDNMLLSAT----GHLKLTDFGSATQVDKNGRIKSIVP 171
+ ++ V YLH L H D+KP+N++L +K+ DFG A ++D K+I
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI-- 177
Query: 172 VGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSIL 231
GTPE+VAPE++ + D+WSIGV++Y LL+G++PF +T T +++
Sbjct: 178 FGTPEFVAPEIVN-------YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS 230
Query: 232 ACDTEDTVSFPSSI--RLSTAMVNFVQS-LVQKLDARLNMDQVLGHPVFDCLDSDPPC-- 286
A + F S +F++ LV+ R+ + L HP D+
Sbjct: 231 AVN----YEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSR 286
Query: 287 IPPPSQENKFHKKD-KRKASPSLKAFQKE 314
KF K ++K++ +
Sbjct: 287 KASAVNMEKFKKFAARKKSNNGSGGGLND 315
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding,
lipoprotein, myristate, PA phosphorylation; HET: STU;
2.6A {Homo sapiens}
Length = 317
Score = 197 bits (502), Expect = 4e-57
Identities = 58/283 (20%), Positives = 111/283 (39%), Gaps = 26/283 (9%)
Query: 12 VSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVL--REKMPNTIER--DIMVKSKC 67
+ + + + +G F + LVE + + +K++L ++ +R D+
Sbjct: 26 IDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNH 85
Query: 68 PYIVNLFYSFQD----MNHVYFIMEYVTGGDFVTLLEN--QPHGYLSESKARFYIYELAQ 121
P I+ L + + ++ + G +E +L+E + + + + +
Sbjct: 86 PNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICR 145
Query: 122 AVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKS--------IVPVG 173
++ +H GY HRD+KP N+LL G L D GS Q +
Sbjct: 146 GLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRC 205
Query: 174 TPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILAC 233
T Y APE+ D+WS+G V Y ++ G P++ S LA
Sbjct: 206 TISYRAPELFS----VQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKG-DSVALAV 260
Query: 234 DTEDTVSFPSSIRLSTAMVNFVQSLVQKL-DARLNMDQVLGHP 275
++ +S P S R S+A+ + S++ R ++ +L
Sbjct: 261 --QNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQL 301
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET:
AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Length = 361
Score = 198 bits (505), Expect = 5e-57
Identities = 89/374 (23%), Positives = 158/374 (42%), Gaps = 39/374 (10%)
Query: 7 LRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNT--------IE 58
+Q+ V +DI + G F + EK + + K + + + + IE
Sbjct: 5 FKQQKVE-DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIE 63
Query: 59 R--DIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGD-FVTLLENQPHGYLSESKARFY 115
R I+ + P I+ L +++ V I+E V+GG+ F L + LSE +A +
Sbjct: 64 REVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQK---ESLSEEEATSF 120
Query: 116 IYELAQAVQYLHGLGYVHRDIKPDNMLL----SATGHLKLTDFGSATQVDKNGRIKSIVP 171
I ++ V YLH H D+KP+N++L H+KL DFG A +++ K+I
Sbjct: 121 IKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNI-- 178
Query: 172 VGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSIL 231
GTPE+VAPE++ + D+WSIGV++Y LL+G++PF +T T ++I
Sbjct: 179 FGTPEFVAPEIVN-------YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANIT 231
Query: 232 ACDTEDTVSFPSSI--RLSTAMVNFVQSLVQK-LDARLNMDQVLGHPVFDCLDSDPPCIP 288
A F + S +F++ L+ K RL + + L HP +D+ +
Sbjct: 232 AVS----YDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDTQQAMVR 287
Query: 289 PPSQENKFHKKDKRKASPSLKAFQKEGRYLDSALPLIGISYTGEPMGANTNTSSDSTLPP 348
S N + K + ++ + L + + + + +
Sbjct: 288 RESVVN----LENFKKQYVRRRWKLSFSIVSLCNHLTRSLMKKVHLRTSEDLRNCESDTE 343
Query: 349 SSEDMRHWKRDRLQ 362
+ R R +
Sbjct: 344 ENIARRKALHPRRR 357
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine
kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing
protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB:
3lm0_A*
Length = 327
Score = 196 bits (501), Expect = 9e-57
Identities = 74/298 (24%), Positives = 132/298 (44%), Gaps = 30/298 (10%)
Query: 25 QGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERD------IMVK-SKCPYIVNLFYSF 77
+G F + K + + K + + + + ++ CP ++NL +
Sbjct: 39 RGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVY 98
Query: 78 QDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIK 137
++ + + I+EY GG+ +L + +SE+ I ++ + V YLH VH D+K
Sbjct: 99 ENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLK 158
Query: 138 PDNMLL---SATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDG 194
P N+LL G +K+ DFG + ++ ++ I +GTPEY+APE+L D
Sbjct: 159 PQNILLSSIYPLGDIKIVDFGMSRKIGHACELREI--MGTPEYLAPEILN-------YDP 209
Query: 195 YTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSI--RLSTAMV 252
T + D+W+IG+++Y LLT ++PF E TY +I + V + +S
Sbjct: 210 ITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVN----VDYSEETFSSVSQLAT 265
Query: 253 NFVQS-LVQKLDARLNMDQVLGHPVFDCLDSDPPCIP----PPSQENKFHKKDKRKAS 305
+F+QS LV+ + R + L H D + P SQ + +
Sbjct: 266 DFIQSLLVKNPEKRPTAEICLSHSWLQQWDFENLFHPEETSSSSQTQDHSVRSSEDKT 323
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase,
transferase; HET: ANP; 2.60A {Plasmodium falciparum}
PDB: 2pmn_X* 2pmo_X*
Length = 348
Score = 197 bits (502), Expect = 9e-57
Identities = 62/343 (18%), Positives = 128/343 (37%), Gaps = 61/343 (17%)
Query: 5 KELRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSH-----------------NTFVMKK 47
K +++K+ +D+ I R + QG F I L E+ K
Sbjct: 21 KYVKEKDKYINDYRIIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDK 80
Query: 48 VLREKMPNTIERDIMVKSKC--PYIVNLFYSFQDMNHVYFIMEYVTGGD------FVTLL 99
+ + + + ++ + + Y + + + VY I EY+ + +L
Sbjct: 81 ISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVL 140
Query: 100 ENQPHGYLSESKARFYIYELAQAVQYLHG-LGYVHRDIKPDNMLLSATGHLKLTDFGSAT 158
+ ++ + I + + Y+H HRD+KP N+L+ G +KL+DFG +
Sbjct: 141 DKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESE 200
Query: 159 QVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
+ + +IK GT E++ PE +G+ D+WS+G+ Y + PF
Sbjct: 201 YM-VDKKIKGS--RGTYEFMPPEFFSNESSYNGA-----KVDIWSLGICLYVMFYNVVPF 252
Query: 219 NYE-TLDMTYSSILACDTEDTVSFPSSIRLSTAMVNF-------------VQSLVQKL-- 262
+ + +L +++I + + +P + ++
Sbjct: 253 SLKISLVELFNNIRTKN----IEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLR 308
Query: 263 ---DARLNMDQVLGHPVFDCLDSDPPCIPPPSQENKFHKKDKR 302
R+ + L H D++ + S+E +KK K+
Sbjct: 309 KNPAERITSEDALKHEWL--ADTNIEDLREFSKE--LYKKRKK 347
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens}
SCOP: d.144.1.7
Length = 321
Score = 196 bits (500), Expect = 1e-56
Identities = 69/305 (22%), Positives = 130/305 (42%), Gaps = 30/305 (9%)
Query: 10 KNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK-----KVLREKMPNTIERDIMVK 64
K + + I + +G FG ++ E S T++ K + + E I+
Sbjct: 1 KELY-EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKK--EISILNI 57
Query: 65 SKCPYIVNLFYSFQDMNHVYFIMEYVTGGD-FVTLLENQPHGYLSESKARFYIYELAQAV 123
++ I++L SF+ M + I E+++G D F + + L+E + Y++++ +A+
Sbjct: 58 ARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFE--LNEREIVSYVHQVCEAL 115
Query: 124 QYLHGLGYVHRDIKPDNMLLSA--TGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPE 181
Q+LH H DI+P+N++ + +K+ +FG A Q+ + + PEY APE
Sbjct: 116 QFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLL--FTAPEYYAPE 173
Query: 182 VLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSF 241
V + D + + D+WS+G + Y LL+G PF ET +I+ + +F
Sbjct: 174 VHQ-------HDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAE----YTF 222
Query: 242 PSSI--RLSTAMVNFVQSLVQK-LDARLNMDQVLGHPVFDCLDSDPPCIPPPSQENKFHK 298
+S ++FV L+ K +R+ + L HP +
Sbjct: 223 DEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWL-KQKIERVSTKVIRTLKHRRY 281
Query: 299 KDKRK 303
Sbjct: 282 YHTLI 286
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding,
serine/threonine-protein kinase, CGD3_920, transferase;
HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB:
3dfa_A 3ma6_A*
Length = 287
Score = 194 bits (495), Expect = 1e-56
Identities = 68/274 (24%), Positives = 123/274 (44%), Gaps = 30/274 (10%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERD------IMVKSKCP 68
++I + +G+FG++ +++ + + +K + + N ++ K P
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 69 YIVNLFYSFQDMNHVYFIMEYVTGGD-FVTLLENQPHGYLSESKARFYIYELAQAVQYLH 127
I+ LF +D + Y + E TGG+ F +++ SE A I ++ + Y+H
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIK---RKRFSEHDAARIIKQVFSGITYMH 138
Query: 128 GLGYVHRDIKPDNMLLSATG---HLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLE 184
VHRD+KP+N+LL + +K+ DFG +T +N ++K +GT Y+APEVL
Sbjct: 139 KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR--IGTAYYIAPEVLR 196
Query: 185 WMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSS 244
Y CD+WS GV+ Y LL+G+ PF + + +F
Sbjct: 197 --------GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGK----YAFDLP 244
Query: 245 I--RLSTAMVNFVQSLVQK-LDARLNMDQVLGHP 275
+S + ++ ++ R+ Q L HP
Sbjct: 245 QWRTISDDAKDLIRKMLTFHPSLRITATQCLEHP 278
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal
transduction, acid starvation, starvation stress
response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A*
1zyd_A* 1zyc_A* 1zxe_A
Length = 303
Score = 195 bits (497), Expect = 1e-56
Identities = 57/294 (19%), Positives = 116/294 (39%), Gaps = 45/294 (15%)
Query: 14 ASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKV-LREKMPNTIERDIMVKSKC--PYI 70
ASDF+ + QG FG + + +KK+ E+ +TI ++M+ + Y+
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYV 64
Query: 71 VNLFYSFQDMNH-------------VYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIY 117
V + ++ + + ++ MEY G L+ ++ +
Sbjct: 65 VRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENL-NQQRDEYWRLFR 123
Query: 118 ELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVP------ 171
++ +A+ Y+H G +HRD+KP N+ + + ++K+ DFG A V ++ I +
Sbjct: 124 QILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 172 -------VGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLD 224
+GT YVA EVL+ G+ Y D++S+G++ +E++
Sbjct: 184 SDNLTSAIGTAMYVATEVLD------GTGHYNEKIDMYSLGIIFFEMIYP--FSTGMERV 235
Query: 225 MTYSSILACDTEDTVSFPSSI--RLSTAMVNFVQSLVQKL-DARLNMDQVLGHP 275
+ + + FP ++ L+ + R +L
Sbjct: 236 NILKKLRSVS----IEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSG 285
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation,
transferase-transferas inhibitor complex; HET: SEP BX7;
1.80A {Homo sapiens}
Length = 319
Score = 195 bits (498), Expect = 1e-56
Identities = 66/304 (21%), Positives = 116/304 (38%), Gaps = 39/304 (12%)
Query: 9 QKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIER-----DIMV 63
++ S + + + QG +++ K++ + F +K ++ +++
Sbjct: 3 SQSTSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLK 62
Query: 64 KSKCPYIVNLFYSFQDMN--HVYFIMEYVTGGD-FVTLLENQPHGYLSESKARFYIYELA 120
K IV LF ++ H IME+ G + L E L ES+ + ++
Sbjct: 63 KLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVV 122
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSAT----GHLKLTDFGSATQVDKNGRIKSIVPVGTPE 176
+ +L G VHR+IKP N++ KLTDFG+A +++ + + S+ GT E
Sbjct: 123 GGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSL--YGTEE 180
Query: 177 YVAPEVLE-WMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF----NYETLDMTYSSIL 231
Y+ P++ E + Y + DLWSIGV Y TGS PF I+
Sbjct: 181 YLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKII 240
Query: 232 ACDTEDTVS---------------FPSSIRLSTAMVNFVQSLVQKL-----DARLNMDQV 271
+S P S LS + + ++ + + DQ
Sbjct: 241 TGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQF 300
Query: 272 LGHP 275
Sbjct: 301 FAET 304
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2,
autoinhibitory, ATP-binding, nucleotide phosphorylation,
serine/threonine-protein kinase; 2.00A {Mus musculus}
PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Length = 342
Score = 195 bits (498), Expect = 3e-56
Identities = 81/289 (28%), Positives = 138/289 (47%), Gaps = 30/289 (10%)
Query: 1 KDVVKELRQKNVSASD-FDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIER 59
+V++L + ++ +D +++K I G++ K ++ F +K + + K T E
Sbjct: 7 HSIVQQLHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEI 66
Query: 60 DIMVK-SKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLEN-QPHGYLSESKARFYIY 117
+I+++ + P I+ L + D +VY + E + GG+ LL+ + SE +A ++
Sbjct: 67 EILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGE---LLDKILRQKFFSEREASAVLF 123
Query: 118 ELAQAVQYLHGLGYVHRDIKPDNMLLSATGH----LKLTDFGSATQVDKNGRIKSIVPVG 173
+ + V+YLH G VHRD+KP N+L +++ DFG A Q+ + P
Sbjct: 124 TITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLM-TPCY 182
Query: 174 TPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF---NYETLDMTYSSI 230
T +VAPEVLE GY +CD+WS+GV+ Y +LTG TPF +T + + I
Sbjct: 183 TANFVAPEVLE-------RQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARI 235
Query: 231 LACDTEDTVSFPSSI--RLSTAMVNFVQSLVQKLDA--RLNMDQVLGHP 275
+ S +S + V ++ D RL VL HP
Sbjct: 236 GSGK----FSLSGGYWNSVSDTAKDLVSKMLHV-DPHQRLTAALVLRHP 279
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV;
calmodulin-binding, nucleotide-binding,
serine/threonine-protein kinase, ATP-binding; HET: DKI;
2.17A {Homo sapiens}
Length = 349
Score = 195 bits (497), Expect = 5e-56
Identities = 83/313 (26%), Positives = 144/313 (46%), Gaps = 32/313 (10%)
Query: 17 FDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIER--DIMVKSKCPYIVNLF 74
F+++ + +G +Y ++K + + +K + + + ++++ P I+ L
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLK 114
Query: 75 YSFQDMNHVYFIMEYVTGGD-FVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVH 133
F+ + ++E VTGG+ F ++E GY SE A + ++ +AV YLH G VH
Sbjct: 115 EIFETPTEISLVLELVTGGELFDRIVE---KGYYSERDAADAVKQILEAVAYLHENGIVH 171
Query: 134 RDIKPDNMLLSATG---HLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNH 190
RD+KP+N+L + LK+ DFG + V+ +K++ GTP Y APE+L
Sbjct: 172 RDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTV--CGTPGYCAPEILR------ 223
Query: 191 GSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDM-TYSSILACDTEDTVSFPS----SI 245
Y D+WS+G+++Y LL G PF E D + IL C+ F S +
Sbjct: 224 -GCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCE----YYFISPWWDEV 278
Query: 246 RLSTAMVNFVQS-LVQKLDARLNMDQVLGHP-VFDCLDSDPPCIPPPSQENKFHKKDK-R 302
S + V+ +V RL Q L HP V + + +F+ + K +
Sbjct: 279 --SLNAKDLVRKLIVLDPKKRLTTFQALQHPWVTGKAANFVHMDTAQKKLQEFNARRKLK 336
Query: 303 KASPSLKAFQKEG 315
A ++ A + G
Sbjct: 337 AAVKAVVASSRLG 349
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding,
nucleotide-binding, serine/threonine-protein kinase,
transferase; HET: TPO; 1.72A {Caenorhabditis elegans}
PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Length = 284
Score = 192 bits (491), Expect = 6e-56
Identities = 79/274 (28%), Positives = 129/274 (47%), Gaps = 29/274 (10%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNT----IER--DIMVKSKCP 68
++D+K + +G F + K + F K + +K+ +ER I K + P
Sbjct: 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHP 65
Query: 69 YIVNLFYSFQDMNHVYFIMEYVTGGD-FVTLLENQPHGYLSESKARFYIYELAQAVQYLH 127
IV L S Q+ + Y + + VTGG+ F ++ + SE+ A I ++ +++ Y H
Sbjct: 66 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVA---REFYSEADASHCIQQILESIAYCH 122
Query: 128 GLGYVHRDIKPDNMLLSATG---HLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLE 184
G VHR++KP+N+LL++ +KL DFG A +V+ + GTP Y++PEVL+
Sbjct: 123 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF--AGTPGYLSPEVLK 180
Query: 185 WMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSS 244
D Y+ D+W+ GV+ Y LL G PF E Y+ I A +PS
Sbjct: 181 -------KDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGA----YDYPSP 229
Query: 245 I--RLSTAMVNFVQS-LVQKLDARLNMDQVLGHP 275
++ + + S L R+ DQ L P
Sbjct: 230 EWDTVTPEAKSLIDSMLTVNPKKRITADQALKVP 263
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4
calmodulin like EF...; calcium dependent protein kinase;
HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II}
PDB: 2qg5_A*
Length = 277
Score = 192 bits (490), Expect = 7e-56
Identities = 76/273 (27%), Positives = 123/273 (45%), Gaps = 30/273 (10%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNT--IER--DIMVKSKCPYI 70
+ ++ I +G++G++ + +K + KK+ + + + ++ +IM P I
Sbjct: 9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNI 68
Query: 71 VNLFYSFQDMNHVYFIMEYVTGGD-FVTLLENQPHGYLSESKARFYIYELAQAVQYLHGL 129
+ L+ +F+D +Y +ME TGG+ F ++ ES A + ++ AV Y H L
Sbjct: 69 IRLYETFEDNTDIYLVMELCTGGELFERVVH---KRVFRESDAARIMKDVLSAVAYCHKL 125
Query: 130 GYVHRDIKPDNMLLSATGH---LKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWM 186
HRD+KP+N L LKL DFG A + +++ VGTP YV+P+VLE
Sbjct: 126 NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTK--VGTPYYVSPQVLE-- 181
Query: 187 EGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSI- 245
Y CD WS GV+ Y LL G PF+ T I +FP
Sbjct: 182 ------GLYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGT----FTFPEKDW 231
Query: 246 -RLSTAMVNFVQSLVQKLD--ARLNMDQVLGHP 275
+S + ++ L+ K R+ Q L H
Sbjct: 232 LNVSPQAESLIRRLLTK-SPKQRITSLQALEHE 263
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33;
2.40A {Caenorhabditis elegans} PDB: 1koa_A
Length = 573
Score = 200 bits (511), Expect = 9e-56
Identities = 90/323 (27%), Positives = 150/323 (46%), Gaps = 29/323 (8%)
Query: 6 ELRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPN--TIER--DI 61
E++ +V +DI + G FG ++ V E+ + N F K V+ + T+ +
Sbjct: 149 EIKHDHVL-DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQT 207
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLE--NQPHGYLSESKARFYIYEL 119
M + P +VNL +F+D N + I E+++GG+ L E H +SE +A Y+ ++
Sbjct: 208 MSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGE---LFEKVADEHNKMSEDEAVEYMRQV 264
Query: 120 AQAVQYLHGLGYVHRDIKPDNMLLSATG--HLKLTDFGSATQVDKNGRIKSIVPVGTPEY 177
+ + ++H YVH D+KP+N++ + LKL DFG +D +K GT E+
Sbjct: 265 CKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVT--TGTAEF 322
Query: 178 VAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTED 237
APEV E D+WS+GV+SY LL+G +PF E D T ++ +CD
Sbjct: 323 AAPEVAE-------GKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCD--- 372
Query: 238 TVSFPSSI--RLSTAMVNFVQSLVQK-LDARLNMDQVLGHPVFDCLDSDPPCIP-PPSQE 293
+ S +S +F++ L+ + R+ + Q L HP ++ P S+
Sbjct: 373 -WNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIPSSRY 431
Query: 294 NKFHKKDKRKASPSLKAFQKEGR 316
K K K + GR
Sbjct: 432 TKIRDSIKTKYDAWPEPLPPLGR 454
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform;
transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A
1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A
1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Length = 365
Score = 194 bits (496), Expect = 9e-56
Identities = 73/277 (26%), Positives = 129/277 (46%), Gaps = 29/277 (10%)
Query: 17 FDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTI------------ERDIMVK 64
+D K I +G + + + + F +K + + E I+ +
Sbjct: 96 YDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQ 155
Query: 65 -SKCPYIVNLFYSFQDMNHVYFIMEYVTGGD-FVTLLENQPHGYLSESKARFYIYELAQA 122
+ P+I+ L S++ + ++ + + + G+ F L E LSE + R + L +A
Sbjct: 156 VAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTE---KVALSEKETRSIMRSLLEA 212
Query: 123 VQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV 182
V +LH VHRD+KP+N+LL ++L+DFG + ++ +++ + GTP Y+APE+
Sbjct: 213 VSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLREL--CGTPGYLAPEI 270
Query: 183 LEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFP 242
L+ + GY DLW+ GV+ + LL GS PF + + I+ F
Sbjct: 271 LK-CSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQ----YQFS 325
Query: 243 SSI--RLSTAMVNFVQSLVQKLD--ARLNMDQVLGHP 275
S S+ + + + L+Q D ARL +Q L HP
Sbjct: 326 SPEWDDRSSTVKDLISRLLQV-DPEARLTAEQALQHP 361
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, EF hand,
bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma
gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A*
3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A*
3v5t_A* 3ku2_A* 3hx4_A*
Length = 484
Score = 197 bits (504), Expect = 1e-55
Identities = 72/325 (22%), Positives = 141/325 (43%), Gaps = 39/325 (12%)
Query: 1 KDVVKELRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERD 60
+ + S + +R + +G+FG++ L ++K + +K + + ++ +++
Sbjct: 13 PGMFVQHSTAIFS-DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE 71
Query: 61 -------IMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLEN-QPHGYLSESKA 112
++ + P I+ L+ F+D + Y + E TGG+ L + SE A
Sbjct: 72 SLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGE---LFDEIISRKRFSEVDA 128
Query: 113 RFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATG---HLKLTDFGSATQVDKNGRIKSI 169
I ++ + Y+H VHRD+KP+N+LL + ++++ DFG +T + + ++K
Sbjct: 129 ARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK 188
Query: 170 VPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSS 229
+GT Y+APEVL Y CD+WS GV+ Y LL+G PFN
Sbjct: 189 --IGTAYYIAPEVLH--------GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKK 238
Query: 230 ILACDTEDTVSFPSS--IRLSTAMVNFVQSLVQK-LDARLNMDQVLGHPVFDCLDSDPPC 286
+ +F ++S + + ++ ++ R++ L H +
Sbjct: 239 VEKGK----YTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQIS 294
Query: 287 IPPPSQEN------KFHKKDK-RKA 304
+ PS +N +F K +A
Sbjct: 295 VDVPSLDNAILNIRQFQGTQKLAQA 319
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, bumped
kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium
parvum} PDB: 3igo_A* 3ncg_A*
Length = 486
Score = 197 bits (504), Expect = 1e-55
Identities = 68/274 (24%), Positives = 120/274 (43%), Gaps = 30/274 (10%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERD------IMVKSKCP 68
++I + +G+FG++ +++ + + +K + + N ++ K P
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 69 YIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLEN-QPHGYLSESKARFYIYELAQAVQYLH 127
I+ LF +D + Y + E TGG+ L + SE A I ++ + Y+H
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGE---LFDEIIKRKRFSEHDAARIIKQVFSGITYMH 138
Query: 128 GLGYVHRDIKPDNMLL---SATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLE 184
VHRD+KP+N+LL +K+ DFG +T +N ++K +GT Y+APEVL
Sbjct: 139 KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR--IGTAYYIAPEVLR 196
Query: 185 WMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSS 244
Y CD+WS GV+ Y LL+G+ PF + + +F
Sbjct: 197 --------GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGK----YAFDLP 244
Query: 245 --IRLSTAMVNFVQSLVQK-LDARLNMDQVLGHP 275
+S + ++ ++ R+ Q L HP
Sbjct: 245 QWRTISDDAKDLIRKMLTFHPSLRITATQCLEHP 278
>2a19_B Interferon-induced, double-stranded RNA-activated kinase;
transferase, protein biosynthesis, protein synthesis
transferase complex; HET: TPO ANP; 2.50A {Homo sapiens}
PDB: 2a1a_B*
Length = 284
Score = 191 bits (487), Expect = 2e-55
Identities = 57/282 (20%), Positives = 104/282 (36%), Gaps = 38/282 (13%)
Query: 14 ASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMVKSKCPYIVNL 73
DF I G FG ++ + + T+V+K+V E + K IV+
Sbjct: 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHY 69
Query: 74 FYSFQDMNH----------------VYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIY 117
+ ++ ++ ME+ G +E + L + A
Sbjct: 70 NGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFE 129
Query: 118 ELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEY 177
++ + V Y+H ++RD+KP N+ L T +K+ DFG T + +G+ GT Y
Sbjct: 130 QITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRS--KGTLRY 187
Query: 178 VAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPFNYETLDMTYSSILACDTE 236
++PE + S Y DL+++G++ ELL T F ++ +
Sbjct: 188 MSPEQIS-------SQDYGKEVDLYALGLILAELLHVCDTAFETSKF---FTDLRDG--- 234
Query: 237 DTVSFPSSIRLSTAMVNFVQSLVQKL-DARLNMDQVLGHPVF 277
+Q L+ K + R N ++L
Sbjct: 235 ---IISDIF--DKKEKTLLQKLLSKKPEDRPNTSEILRTLTV 271
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase,
kinase, membrane, ATP-binding, prenylation,
serine/threonine-protein kinase, alternative splicing;
HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Length = 304
Score = 189 bits (483), Expect = 1e-54
Identities = 83/274 (30%), Positives = 134/274 (48%), Gaps = 32/274 (11%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKM--PNTIER--DIMVKSKCPYI 70
F + G F +++LV+++ + F +K + + +++E ++ K K I
Sbjct: 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENI 68
Query: 71 VNLFYSFQDMNHVYFIMEYVTGGD-FVTLLENQPHGYLSESKARFYIYELAQAVQYLHGL 129
V L ++ H Y +M+ V+GG+ F +LE G +E A I ++ AV+YLH
Sbjct: 69 VTLEDIYESTTHYYLVMQLVSGGELFDRILE---RGVYTEKDASLVIQQVLSAVKYLHEN 125
Query: 130 GYVHRDIKPDNMLLSATG---HLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWM 186
G VHRD+KP+N+L + +TDFG + +++NG + + GTP YVAPEVL
Sbjct: 126 GIVHRDLKPENLLYLTPEENSKIMITDFGLSK-MEQNGIMSTA--CGTPGYVAPEVLAQ- 181
Query: 187 EGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPS--- 243
Y+ + D WSIGV++Y LL G PF ET + I F S
Sbjct: 182 ------KPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGY----YEFESPFW 231
Query: 244 -SIRLSTAMVNFVQSLVQK-LDARLNMDQVLGHP 275
I S + +F+ L++K + R ++ L HP
Sbjct: 232 DDI--SESAKDFICHLLEKDPNERYTCEKALSHP 263
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia
californica} SCOP: d.144.1.7
Length = 387
Score = 192 bits (489), Expect = 1e-54
Identities = 84/320 (26%), Positives = 150/320 (46%), Gaps = 24/320 (7%)
Query: 6 ELRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK--KVLREKMPNTIER--DI 61
E++Q +V +DI + G FG ++ EK + FV K T++ I
Sbjct: 43 EVKQGSVY-DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISI 101
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQ 121
M + P ++NL +F+D + I+E+++GG+ + + + SE++ Y+ + +
Sbjct: 102 MNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKM-SEAEVINYMRQACE 160
Query: 122 AVQYLHGLGYVHRDIKPDNMLLSA--TGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVA 179
++++H VH DIKP+N++ +K+ DFG AT+++ + +K T E+ A
Sbjct: 161 GLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVT--TATAEFAA 218
Query: 180 PEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTV 239
PE+++ + D+W+IGV+ Y LL+G +PF E T ++ CD
Sbjct: 219 PEIVD-------REPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCD----W 267
Query: 240 SFPSSI--RLSTAMVNFVQSLVQK-LDARLNMDQVLGHPVFDCLDSDPPCIPPPSQENKF 296
F +S +F+++L+QK RL + L HP S+ P S+ NK
Sbjct: 268 EFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHSNLTSRIPSSRYNKI 327
Query: 297 HKKDKRKASPSLKAFQKEGR 316
+K K K + GR
Sbjct: 328 RQKIKEKYADWPAPQPAIGR 347
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin
dependent protein kinase, Mg synaptic plasticity,
pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB:
3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Length = 351
Score = 191 bits (487), Expect = 1e-54
Identities = 73/309 (23%), Positives = 135/309 (43%), Gaps = 35/309 (11%)
Query: 17 FDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNT-------IER--DIMVKSKC 67
+++ I +G F + +++ F +K V K ++ ++R I K
Sbjct: 26 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 68 PYIVNLFYSFQDMNHVYFIMEYVTGG---DFVTLLENQPHGYLSESKARFYIYELAQAVQ 124
P+IV L ++ +Y + E++ G + + Y SE+ A Y+ ++ +A++
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVY-SEAVASHYMRQILEALR 144
Query: 125 YLHGLGYVHRDIKPDNMLLSATGH---LKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPE 181
Y H +HRD+KP +LL++ + +KL FG A Q+ ++G + VGTP ++APE
Sbjct: 145 YCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGR-VGTPHFMAPE 203
Query: 182 VLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSF 241
V++ + Y D+W GV+ + LL+G PF Y T + + I+
Sbjct: 204 VVK-------REPYGKPVDVWGCGVILFILLSGCLPF-YGTKERLFEGIIKGK----YKM 251
Query: 242 PSSI--RLSTAMVNFVQS-LVQKLDARLNMDQVLGHP---VFDCLDSDPPCIPPPSQENK 295
+S + + V+ L+ R+ + + L HP D Q K
Sbjct: 252 NPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETVEQLRK 311
Query: 296 FHKKDKRKA 304
F+ + K K
Sbjct: 312 FNARRKLKG 320
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex,
ATP-binding, cytoplasm, nucleotide-binding, nucleus,
phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo
sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X*
3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A*
3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Length = 336
Score = 190 bits (485), Expect = 2e-54
Identities = 77/294 (26%), Positives = 129/294 (43%), Gaps = 25/294 (8%)
Query: 25 QGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMVK-SKCPYIVNLFYSFQDMNH- 82
G G + +++ +K + E D + S P+IV + +++M+H
Sbjct: 39 LGVNGKVLECFHRRTGQKCALKLLYDSPKARQ-EVDHHWQASGGPHIVCILDVYENMHHG 97
Query: 83 ---VYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPD 139
+ IME + GG+ + ++ + +E +A + ++ A+Q+LH HRD+KP+
Sbjct: 98 KRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPE 157
Query: 140 NMLLSATGH---LKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYT 196
N+L ++ LKLTDFG A + +++ P TP YVAPEVL G + Y
Sbjct: 158 NLLYTSKEKDAVLKLTDFGFAKETT-QNALQT--PCYTPYYVAPEVL-------GPEKYD 207
Query: 197 GSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSI--RLSTAMVNF 254
SCD+WS+GV+ Y LL G PF T + FP+ +S
Sbjct: 208 KSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQL 267
Query: 255 VQS-LVQKLDARLNMDQVLGHP---VFDCLDSDPPCIPPPSQENKFHKKDKRKA 304
++ L RL + Q + HP + P QE+K H + ++
Sbjct: 268 IRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPLHTARVLQEDKDHWDEVKEE 321
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain
and 4 calmodulin...; transferase, calcium dependent
protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum}
PDB: 3hzt_A* 3dxn_A 3l19_A*
Length = 494
Score = 195 bits (497), Expect = 2e-54
Identities = 70/288 (24%), Positives = 125/288 (43%), Gaps = 31/288 (10%)
Query: 1 KDVVKELRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERD 60
+ ++ ++S + + + G +G++ L +K +H +K + + + +
Sbjct: 24 PGMFITSKKGHLS-EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSK 82
Query: 61 ------IMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLEN-QPHGYLSESKAR 113
++ P I+ L+ F+D + Y +ME GG+ L + +E A
Sbjct: 83 LLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGE---LFDEIIHRMKFNEVDAA 139
Query: 114 FYIYELAQAVQYLHGLGYVHRDIKPDNMLL---SATGHLKLTDFGSATQVDKNGRIKSIV 170
I ++ V YLH VHRD+KP+N+LL +K+ DFG + + ++K
Sbjct: 140 VIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKER- 198
Query: 171 PVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSI 230
+GT Y+APEVL Y CD+WSIGV+ + LL G PF +T +
Sbjct: 199 -LGTAYYIAPEVLR--------KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKV 249
Query: 231 LACDTEDTVSFPSS--IRLSTAMVNFVQSLVQK-LDARLNMDQVLGHP 275
+F S +S + ++ ++Q R++ Q L HP
Sbjct: 250 EKGK----YTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHP 293
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2
calmodulin-like EF...; structural genomics, protist
parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa
II}
Length = 345
Score = 190 bits (483), Expect = 3e-54
Identities = 75/316 (23%), Positives = 121/316 (38%), Gaps = 64/316 (20%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTI---------ERDIMVKS 65
+ +K I QG++G + + E Q+ +K + + K+ E +M K
Sbjct: 26 KKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKL 85
Query: 66 KCPYIVNLFYSFQDMNHVYFIMEYVTGGD------------------------------- 94
P I L+ ++D ++ +ME GG
Sbjct: 86 HHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPEC 145
Query: 95 -------FVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSA-- 145
+ E + ++ A+ YLH G HRDIKP+N L S
Sbjct: 146 NEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNK 205
Query: 146 TGHLKLTDFGSATQVDKNGRIKSIV---PVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLW 202
+ +KL DFG + + K + GTP +VAPEVL N ++ Y CD W
Sbjct: 206 SFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVL-----NTTNESYGPKCDAW 260
Query: 203 SIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSI--RLSTAMVNFVQSLVQ 260
S GV+ + LL G+ PF T S +L + F + LS + + +L+
Sbjct: 261 SAGVLLHLLLMGAVPFPGVNDADTISQVLNKK----LCFENPNYNVLSPLARDLLSNLLN 316
Query: 261 K-LDARLNMDQVLGHP 275
+ +D R + + L HP
Sbjct: 317 RNVDERFDAMRALQHP 332
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK,
ATP-binding, metal-binding, NUCL binding,
serine/threonine-protein kinase, transferase; 2.00A
{Homo sapiens} PDB: 3kn5_A
Length = 325
Score = 189 bits (481), Expect = 4e-54
Identities = 82/303 (27%), Positives = 131/303 (43%), Gaps = 26/303 (8%)
Query: 25 QGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTI-ERDIMVK-SKCPYIVNLFYSFQDMNH 82
+G+F K+S+ F +K + + NT E + P IV L F D H
Sbjct: 21 EGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLHEVFHDQLH 80
Query: 83 VYFIMEYVTGGDFVTLLEN-QPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNM 141
+ +ME + GG+ L E + + SE++A + + +L AV ++H +G VHRD+KP+N+
Sbjct: 81 TFLVMELLNGGE---LFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENL 137
Query: 142 LL---SATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGS 198
L + +K+ DFG A + + P T Y APE+L +GY S
Sbjct: 138 LFTDENDNLEIKIIDFGFARLKPPDNQPLKT-PCFTLHYAAPELLN-------QNGYDES 189
Query: 199 CDLWSIGVVSYELLTGSTPFNYETLDMTYSS---ILACDTEDTVSFPSSI--RLSTAMVN 253
CDLWS+GV+ Y +L+G PF +T +S I+ + SF +S +
Sbjct: 190 CDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKD 249
Query: 254 FVQSLVQKLDA--RLNMDQVLGHP-VFDCLDSDPPCIPPPSQENKFHKKDKRKASPSLKA 310
+Q L+ D RL M + + + D + P + A
Sbjct: 250 LIQGLLTV-DPNKRLKMSGLRYNEWLQDGSQLSSNPLMTPDILGSSGAAVHTCVKATFHA 308
Query: 311 FQK 313
F K
Sbjct: 309 FNK 311
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation,
transferase-transferas inhibitor complex; HET: BX7;
2.60A {Homo sapiens}
Length = 396
Score = 191 bits (486), Expect = 5e-54
Identities = 64/303 (21%), Positives = 116/303 (38%), Gaps = 39/303 (12%)
Query: 9 QKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIER-----DIMV 63
++ S + + + QG +++ K++ + F +K ++ +++
Sbjct: 3 SQSTSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLK 62
Query: 64 KSKCPYIVNLFYSFQDMN--HVYFIMEYVTGGD-FVTLLENQPHGYLSESKARFYIYELA 120
K IV LF ++ H IME+ G + L E L ES+ + ++
Sbjct: 63 KLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVV 122
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSAT----GHLKLTDFGSATQVDKNGRIKSIVPVGTPE 176
+ +L G VHR+IKP N++ KLTDFG+A +++ + + S+ GT E
Sbjct: 123 GGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSL--YGTEE 180
Query: 177 YVAPEVLE-WMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILA--- 232
Y+ P++ E + Y + DLWSIGV Y TGS PF ++
Sbjct: 181 YLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKII 240
Query: 233 ----------------CDTEDTVSFPSSIRLSTAMVNFVQSLVQKL-----DARLNMDQV 271
+ + P S LS + + ++ + + DQ
Sbjct: 241 TGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQF 300
Query: 272 LGH 274
Sbjct: 301 FAE 303
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated,
transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A*
2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Length = 362
Score = 189 bits (483), Expect = 6e-54
Identities = 84/305 (27%), Positives = 138/305 (45%), Gaps = 32/305 (10%)
Query: 17 FDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNT----IER--DIMVKSKCPYI 70
+D+K + +G F + K + F K + +K+ +ER I K + P I
Sbjct: 31 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNI 90
Query: 71 VNLFYSFQDMNHVYFIMEYVTGGD-FVTLLENQPHGYLSESKARFYIYELAQAVQYLHGL 129
V L S Q+ + Y + + VTGG+ F ++ + SE+ A I ++ +++ Y H
Sbjct: 91 VRLHDSIQEESFHYLVFDLVTGGELFEDIVA---REFYSEADASHCIQQILESIAYCHSN 147
Query: 130 GYVHRDIKPDNMLLSATG---HLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWM 186
G VHR++KP+N+LL++ +KL DFG A +V+ + GTP Y++PEVL+
Sbjct: 148 GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF--AGTPGYLSPEVLK-- 203
Query: 187 EGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSI- 245
D Y+ D+W+ GV+ Y LL G PF E Y+ I A +PS
Sbjct: 204 -----KDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGA----YDYPSPEW 254
Query: 246 -RLSTAMVNFVQS-LVQKLDARLNMDQVLGHP---VFDCLDSDPPCIPPPSQENKFHKKD 300
++ + + S L R+ DQ L P + + S KF+ +
Sbjct: 255 DTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRERVASAIHRQDTVDCLKKFNARR 314
Query: 301 KRKAS 305
K K +
Sbjct: 315 KLKGA 319
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural
genomics, structural genomic consortium, SGC,
transferase; HET: ANP; 2.10A {Plasmodium berghei}
Length = 504
Score = 193 bits (492), Expect = 9e-54
Identities = 66/299 (22%), Positives = 120/299 (40%), Gaps = 42/299 (14%)
Query: 1 KDVVKELRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTI--- 57
+ ++ + + R + G +G++ L +EK H+ +K + + +
Sbjct: 23 PGMYVRKKEGKIG-ESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSD 81
Query: 58 --------------ERDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLEN-Q 102
E ++ P I+ LF F+D + Y + E+ GG+ L E
Sbjct: 82 DNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGE---LFEQII 138
Query: 103 PHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATG---HLKLTDFGSATQ 159
E A + ++ + YLH VHRDIKP+N+LL ++K+ DFG ++
Sbjct: 139 NRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSF 198
Query: 160 VDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFN 219
K+ +++ +GT Y+APEVL+ Y CD+WS GV+ Y LL G PF
Sbjct: 199 FSKDYKLRDR--LGTAYYIAPEVLK--------KKYNEKCDVWSCGVIMYILLCGYPPFG 248
Query: 220 YETLDMTYSSILACDTEDTVSFPSS--IRLSTAMVNFVQSLVQK-LDARLNMDQVLGHP 275
+ + F + +S ++ ++ + R ++ L
Sbjct: 249 GQNDQDIIKKVEKGK----YYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSR 303
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros
picked threonine kinase, SGC, structural genomics
consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB:
3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Length = 313
Score = 187 bits (476), Expect = 1e-53
Identities = 62/286 (21%), Positives = 120/286 (41%), Gaps = 24/286 (8%)
Query: 5 KELRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTI------E 58
+ +V + I + I G ++ V ++ + +K V E+ N E
Sbjct: 18 LYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQ-IYAIKYVNLEEADNQTLDSYRNE 76
Query: 59 RDIM--VKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYI 116
+ ++ I+ L+ ++Y +ME D + L+ + + + Y
Sbjct: 77 IAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECG-NIDLNSWLKK--KKSIDPWERKSYW 133
Query: 117 YELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGR-IKSIVPVGTP 175
+ +AV +H G VH D+KP N L+ G LKL DFG A Q+ + + VGT
Sbjct: 134 KNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTV 192
Query: 176 EYVAPEVLEWMEGNHGSD----GYTGSCDLWSIGVVSYELLTGSTPF-NYETLDMTYSSI 230
Y+ PE ++ M + + + D+WS+G + Y + G TPF +I
Sbjct: 193 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI 252
Query: 231 LACDTEDTVSFPSSIRLSTAMVNFVQSLVQK-LDARLNMDQVLGHP 275
+ + E + FP + + ++ +++ R+++ ++L HP
Sbjct: 253 IDPNHE--IEFPDIP--EKDLQDVLKCCLKRDPKQRISIPELLAHP 294
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif,
transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A*
2hw6_A
Length = 316
Score = 187 bits (476), Expect = 2e-53
Identities = 70/287 (24%), Positives = 122/287 (42%), Gaps = 48/287 (16%)
Query: 25 QGNFGDIYLVEEKQSHNTFVMKKVLREKM--PNTIER--DIMVK-SKCPYIVNLFYSFQD 79
+G + + + +K + ++ + + R +++ + ++ L F++
Sbjct: 23 EGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEE 82
Query: 80 MNHVYFIMEYVTGGDFVTLLEN-QPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKP 138
+ Y + E + GG +L + + +E +A + ++A A+ +LH G HRD+KP
Sbjct: 83 EDRFYLVFEKMRGGS---ILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKP 139
Query: 139 DNMLLSATGH---LKLTDFGSATQVDKNGRIKSIV------PVGTPEYVAPEVLEWMEGN 189
+N+L +K+ DF + + NG I P G+ EY+APEV+E +
Sbjct: 140 ENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAF--S 197
Query: 190 HGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMT---------------YSSILACD 234
+ Y CDLWS+GV+ Y LL+G PF + SI
Sbjct: 198 EEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGK 257
Query: 235 TEDTVSFPS----SIRLSTAMVNFVQSLVQKLDA--RLNMDQVLGHP 275
FP I S A + + L+ + DA RL+ QVL HP
Sbjct: 258 ----YEFPDKDWAHI--SCAAKDLISKLLVR-DAKQRLSAAQVLQHP 297
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase,
nucleus, meiosis, mitosis, cytoplasm, metal-binding,
phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB:
2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A*
2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A*
4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Length = 279
Score = 185 bits (473), Expect = 2e-53
Identities = 63/278 (22%), Positives = 112/278 (40%), Gaps = 29/278 (10%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPN------TIERDIMVKSKCPY 69
D+++ I G++G + K V K++ M E +++ + K P
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 66
Query: 70 IVNLFYSFQDM--NHVYFIMEYVTGGDFVTLLEN--QPHGYLSESKARFYIYELAQAVQY 125
IV + D +Y +MEY GGD +++ + YL E + +L A++
Sbjct: 67 IVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKE 126
Query: 126 LHGLGY-----VHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAP 180
H +HRD+KP N+ L ++KL DFG A ++ + VGTP Y++P
Sbjct: 127 CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTF-VGTPYYMSP 185
Query: 181 EVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVS 240
E + Y D+WS+G + YEL PF + I
Sbjct: 186 EQMN-------RMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFR---- 234
Query: 241 FPSSIRLSTAMVNFVQSLVQK-LDARLNMDQVLGHPVF 277
R S + + ++ R +++++L +P+
Sbjct: 235 -RIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI 271
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase,
FHA domain, ATP-binding, cell cycle, mutation,
LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens}
PDB: 3i6w_A
Length = 419
Score = 188 bits (479), Expect = 8e-53
Identities = 73/280 (26%), Positives = 136/280 (48%), Gaps = 34/280 (12%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIER------------DIMV 63
++ + + + G G++ L E+++ ++ + + K R +I+
Sbjct: 136 EYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILK 195
Query: 64 KSKCPYIVNLFYSFQDMNHVYFIMEYVTGGD-FVTLLENQPHGYLSESKARFYIYELAQA 122
K P I+ + F Y ++E + GG+ F ++ + L E+ + Y Y++ A
Sbjct: 196 KLNHPCIIKIKNFFDA-EDYYIVLELMEGGELFDKVVG---NKRLKEATCKLYFYQMLLA 251
Query: 123 VQYLHGLGYVHRDIKPDNMLLSATG---HLKLTDFGSATQVDKNGRIKSIVPVGTPEYVA 179
VQYLH G +HRD+KP+N+LLS+ +K+TDFG + + + ++++ GTP Y+A
Sbjct: 252 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL--CGTPTYLA 309
Query: 180 PEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMT-YSSILACDTEDT 238
PEVL + G+ GY + D WS+GV+ + L+G PF+ ++ I +
Sbjct: 310 PEVLV----SVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGK---- 361
Query: 239 VSFPSSI--RLSTAMVNFVQS-LVQKLDARLNMDQVLGHP 275
+F + +S ++ V+ LV AR ++ L HP
Sbjct: 362 YNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHP 401
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer,
transferase, serine/threonine-protein kinase,
nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Length = 373
Score = 186 bits (475), Expect = 1e-52
Identities = 67/280 (23%), Positives = 131/280 (46%), Gaps = 24/280 (8%)
Query: 6 ELRQKNVSAS-DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK----KVLREKMPNTIERD 60
+Q V++ + G FG ++ EE + K + +++K E
Sbjct: 79 TAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEIS 138
Query: 61 IMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELA 120
+M + ++ L+ +F+ N + +MEYV GG+ + ++ + +E ++ ++
Sbjct: 139 VMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNL-TELDTILFMKQIC 197
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSATG--HLKLTDFGSATQVDKNGRIKSIVPVGTPEYV 178
+ ++++H + +H D+KP+N+L +K+ DFG A + ++K GTPE++
Sbjct: 198 EGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVN--FGTPEFL 255
Query: 179 APEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDT 238
APEV+ D + D+WS+GV++Y LL+G +PF + T ++ILAC
Sbjct: 256 APEVVN-------YDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACR---- 304
Query: 239 VSFPSSI--RLSTAMVNFVQSLVQK-LDARLNMDQVLGHP 275
+S F+ L+ K R++ + L HP
Sbjct: 305 WDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHP 344
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer,
anticancer drug design; HET: YCF; 1.77A {Homo sapiens}
PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A*
2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A*
2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Length = 322
Score = 185 bits (471), Expect = 1e-52
Identities = 82/321 (25%), Positives = 146/321 (45%), Gaps = 38/321 (11%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNT----------IER--DIMV 63
++ + + + G G++ L E+++ +K + + K +E +I+
Sbjct: 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 70
Query: 64 KSKCPYIVNLFYSFQDMNHVYFIMEYVTGG---DFVTLLENQPHGYLSESKARFYIYELA 120
K P I+ + F Y ++E + GG D V + L E+ + Y Y++
Sbjct: 71 KLNHPCIIKIKNFFDA-EDYYIVLELMEGGELFDKVV-----GNKRLKEATCKLYFYQML 124
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSATG---HLKLTDFGSATQVDKNGRIKSIVPVGTPEY 177
AVQYLH G +HRD+KP+N+LLS+ +K+TDFG + + + ++++ GTP Y
Sbjct: 125 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL--CGTPTY 182
Query: 178 VAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMT-YSSILACDTE 236
+APEVL + G+ GY + D WS+GV+ + L+G PF+ ++ I +
Sbjct: 183 LAPEVLV----SVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGK-- 236
Query: 237 DTVSFPSSI--RLSTAMVNFVQS-LVQKLDARLNMDQVLGHPVFDCLDSDPPCIPPPSQE 293
+F + +S ++ V+ LV AR ++ L HP D S+E
Sbjct: 237 --YNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLLSEE 294
Query: 294 NKFHKKDKRKASPSLKAFQKE 314
N+ + A PS +
Sbjct: 295 NESTALPQVLAQPSTSRKRPR 315
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta
7 linker; phosphorylation, cytosolic,
transferase-transferase inhibitor complex; HET: DB8;
3.55A {Homo sapiens}
Length = 444
Score = 188 bits (479), Expect = 2e-52
Identities = 82/307 (26%), Positives = 130/307 (42%), Gaps = 31/307 (10%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNT----IER--DIMVKSKCP 68
++ + + +G F + + + + + +K+ +ER I K P
Sbjct: 11 EEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHP 70
Query: 69 YIVNLFYSFQDMNHVYFIMEYVTGGD-FVTLLENQPHGYLSESKARFYIYELAQAVQYLH 127
IV L S + H Y I + VTGG+ F ++ Y SE+ A I ++ +AV + H
Sbjct: 71 NIVRLHDSISEEGHHYLIFDLVTGGELFEDIVA---REYYSEADASHCIQQILEAVLHCH 127
Query: 128 GLGYVHRDIKPDNMLLSATG---HLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLE 184
+G VHR++KP+N+LL++ +KL DFG A +V+ + GTP Y++PEVL
Sbjct: 128 QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGF-AGTPGYLSPEVLR 186
Query: 185 WMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSS 244
D Y DLW+ GV+ Y LL G PF E Y I A FPS
Sbjct: 187 -------KDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGA----YDFPSP 235
Query: 245 I--RLSTAMVNFVQS-LVQKLDARLNMDQVLGHP---VFDCLDSDPPCIPPPSQENKFHK 298
++ + + L R+ + L HP + S KF+
Sbjct: 236 EWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKFNA 295
Query: 299 KDKRKAS 305
+ K K +
Sbjct: 296 RRKLKGA 302
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation,
staurosporine, transfe; HET: STU; 2.70A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Length = 400
Score = 186 bits (475), Expect = 2e-52
Identities = 73/304 (24%), Positives = 137/304 (45%), Gaps = 32/304 (10%)
Query: 19 IKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMVK-SKCPYIVNLFYSF 77
+ + G G + + K++ F +K + E ++ + S+CP+IV + +
Sbjct: 66 TSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR-EVELHWRASQCPHIVRIVDVY 124
Query: 78 QDM----NHVYFIMEYVTGGDFVTLLE---NQPHGYLSESKARFYIYELAQAVQYLHGLG 130
+++ + +ME + GG+ L ++ +E +A + + +A+QYLH +
Sbjct: 125 ENLYAGRKCLLIVMECLDGGE---LFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN 181
Query: 131 YVHRDIKPDNMLLSATGH---LKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWME 187
HRD+KP+N+L ++ LKLTDFG A + + + + P TP YVAPEVL
Sbjct: 182 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT--PCYTPYYVAPEVLG--- 236
Query: 188 GNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSI-- 245
+ Y SCD+WS+GV+ Y LL G PF + FP+
Sbjct: 237 ----PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWS 292
Query: 246 RLSTAMVNFVQSLVQKLDA--RLNMDQVLGHP---VFDCLDSDPPCIPPPSQENKFHKKD 300
+S + +++L++ + R+ + + + HP + P +E+K +D
Sbjct: 293 EVSEEVKMLIRNLLKT-EPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKERWED 351
Query: 301 KRKA 304
++
Sbjct: 352 VKEE 355
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism,
metal-binding, cell cycle kinase, mitosis, cytoplasm,
magnesium, transferase; 2.10A {Homo sapiens} PDB:
2wqn_A*
Length = 310
Score = 183 bits (467), Expect = 2e-52
Identities = 63/273 (23%), Positives = 118/273 (43%), Gaps = 24/273 (8%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIER-------DIMVKSKC 67
++F I++ I +G F ++Y +KKV + + R D++ +
Sbjct: 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH 91
Query: 68 PYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLEN--QPHGYLSESKARFYIYELAQAVQY 125
P ++ + SF + N + ++E GD ++++ + + E Y +L A+++
Sbjct: 92 PNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEH 151
Query: 126 LHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEW 185
+H +HRDIKP N+ ++ATG +KL D G + VGTP Y++PE +
Sbjct: 152 MHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSL-VGTPYYMSPERIH- 209
Query: 186 MEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMT--YSSILACDTEDTVSFPS 243
+GY D+WS+G + YE+ +PF + +++ I CD PS
Sbjct: 210 ------ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPL---PS 260
Query: 244 SIRLSTAMVNFVQSLVQK-LDARLNMDQVLGHP 275
S + V + + R ++ V
Sbjct: 261 D-HYSEELRQLVNMCINPDPEKRPDVTYVYDVA 292
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase
activation, phosphorylation, ATP- binding,
nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Length = 343
Score = 184 bits (469), Expect = 3e-52
Identities = 65/322 (20%), Positives = 125/322 (38%), Gaps = 24/322 (7%)
Query: 12 VSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIM--------V 63
V + I + I G ++ V ++ + +K V E+ N +
Sbjct: 6 VKGRIYSILKQIGSGGSSKVFQVLNEKKQ-IYAIKYVNLEEADNQTLDSYRNEIAYLNKL 64
Query: 64 KSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAV 123
+ I+ L+ ++Y +ME D + L+ + + + Y + +AV
Sbjct: 65 QQHSDKIIRLYDYEITDQYIYMVMECG-NIDLNSWLKK--KKSIDPWERKSYWKNMLEAV 121
Query: 124 QYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGR-IKSIVPVGTPEYVAPEV 182
+H G VH D+KP N L+ G LKL DFG A Q+ + + VGT Y+ PE
Sbjct: 122 HTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEA 180
Query: 183 LEWMEGNHGSD----GYTGSCDLWSIGVVSYELLTGSTPF-NYETLDMTYSSILACDTED 237
++ M + + + D+WS+G + Y + G TPF +I+ D
Sbjct: 181 IKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII--DPNH 238
Query: 238 TVSFPSSIRLSTAMVNFVQSLVQK-LDARLNMDQVLGHPVFDCLDSDPPCIPPPSQENKF 296
+ FP + + ++ +++ R+++ ++L HP + + E
Sbjct: 239 EIEFPDIP--EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEEMK 296
Query: 297 HKKDKRKASPSLKAFQKEGRYL 318
+ + S + K + L
Sbjct: 297 YVLGQLVGLNSPNSILKAAKTL 318
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics,
structural genomics consortium, SGC; 1.80A {Toxoplasma
gondii} PDB: 2w1z_A
Length = 377
Score = 180 bits (459), Expect = 1e-50
Identities = 43/321 (13%), Positives = 93/321 (28%), Gaps = 66/321 (20%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNT------------------- 56
+ Q + ++++ +F + + P +
Sbjct: 74 TLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGI 133
Query: 57 -------------IERDIMVKSKCPYIVNLFYSFQDMNHV-YFIMEYVTGGDFVTLLEN- 101
D++ + ++ + +DM + F + + T E
Sbjct: 134 KNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVL 193
Query: 102 ----QPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSA 157
H L ++ + + LH G VH ++P +++L G + LT F
Sbjct: 194 LSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHL 253
Query: 158 TQVDKNGRIKSIVPVGTPEYVAPEVLE----WMEGNHGSDGYTGSCDLWSIGVVSYELLT 213
+ V + + PE+ T S D W++G+V Y +
Sbjct: 254 VRDGARV-----VSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWC 308
Query: 214 GSTPFNYETLDMTYSSILACDTEDTVSFPSSIRLSTAMVNFVQSLVQKL-----DARLNM 268
P + I + P V++L++ + RL
Sbjct: 309 ADLPITKDAALGGSEWIF----RSCKNIPQP----------VRALLEGFLRYPKEDRLLP 354
Query: 269 DQVLGHPVFDCLDSDPPCIPP 289
Q + P ++ L ++ P
Sbjct: 355 LQAMETPEYEQLRTELSAALP 375
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding,
nucleotide-bindi phosphoprotein,
serine/threonine-protein kinase; HET: 537 7PE; 2.88A
{Homo sapiens} PDB: 2zmc_A*
Length = 390
Score = 180 bits (457), Expect = 4e-50
Identities = 65/323 (20%), Positives = 128/323 (39%), Gaps = 24/323 (7%)
Query: 11 NVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNT----IERDI----M 62
+V + I + I G ++ V ++ + +K V E+ N +I
Sbjct: 52 SVKGRIYSILKQIGSGGSSKVFQVLNEKKQ-IYAIKYVNLEEADNQTLDSYRNEIAYLNK 110
Query: 63 VKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQA 122
++ I+ L+ ++Y +ME D + L+ + + + Y + +A
Sbjct: 111 LQQHSDKIIRLYDYEITDQYIYMVMECG-NIDLNSWLKK--KKSIDPWERKSYWKNMLEA 167
Query: 123 VQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNG-RIKSIVPVGTPEYVAPE 181
V +H G VH D+KP N L+ G LKL DFG A Q+ + + VG Y+ PE
Sbjct: 168 VHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPE 226
Query: 182 VLEWMEGNHGSDG----YTGSCDLWSIGVVSYELLTGSTPF-NYETLDMTYSSILACDTE 236
++ M + + + D+WS+G + Y + G TPF +I+ + E
Sbjct: 227 AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHE 286
Query: 237 DTVSFPSSIRLSTAMVNFVQSLVQK-LDARLNMDQVLGHPVFDCLDSDPPCIPPPSQENK 295
+ FP + + ++ +++ R+++ ++L HP + + E
Sbjct: 287 --IEFPDIP--EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEEM 342
Query: 296 FHKKDKRKASPSLKAFQKEGRYL 318
+ + S + K + L
Sbjct: 343 KYVLGQLVGLNSPNSILKAAKTL 365
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation,
kinase domain ubiquitin-like domain, kinase, substrate
binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Length = 676
Score = 182 bits (464), Expect = 6e-49
Identities = 107/654 (16%), Positives = 213/654 (32%), Gaps = 111/654 (16%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIER-----DIM 62
+ +++K + G FG + + + +K+ +E P ER IM
Sbjct: 7 SLPTQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIM 66
Query: 63 VKSKCPYIVNLFYSFQDMNHV------YFIMEYVTGGD-FVTLLENQPHGYLSESKARFY 115
K P +V+ + + MEY GGD L + + L E R
Sbjct: 67 KKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTL 126
Query: 116 IYELAQAVQYLHGLGYVHRDIKPDNMLLSATGH---LKLTDFGSATQVDKNGRIKSIVPV 172
+ +++ A++YLH +HRD+KP+N++L K+ D G A ++D+ V
Sbjct: 127 LSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEF--V 184
Query: 173 GTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILA 232
GT +Y+APE+LE YT + D WS G +++E +TG PF + + +
Sbjct: 185 GTLQYLAPELLE-------QKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVR 237
Query: 233 C----------DTEDTVSFPSSIRLSTAMVNFVQSLVQKLDA---------RLNMDQVLG 273
D V F S + + + +++ R Q
Sbjct: 238 EKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPN 297
Query: 274 HPVFDCLDSDPP-----------------CIPPPSQENKFHKKDKRKASPSLKA---FQK 313
F LDS + ++ + Q
Sbjct: 298 VGCFQALDSILSLKLLSVMNMVSGRVHTYPVTENENLQNLKSWLQQDTGIPEEEQELLQA 357
Query: 314 EGRYLDSALPLIGISYTGEPMGANTNTS--------------SDSTLPPSSEDMRHWKRD 359
G L+SA PL + +LP E + +D
Sbjct: 358 SGLALNSAQPLTQYVIDCTVIDGRQGEGDLIFLFDNRKTVYEPQISLPAHPESVSIVLQD 417
Query: 360 ------RLQLLQQLAEAKASLEDLS--------CSRTRVLALQAQVSSLQQDLTSHTSLL 405
L + + ++ L RT ++ L + L + S TS
Sbjct: 418 PKRPLTYTHLRRVWGQIWQTIRALKEDCARLLQGQRTSMVNLLRYNTELSKKKNSMTSEC 477
Query: 406 SKKEEEIDRLRQ------EMVKKESDLVATSSDLVATRHELEEVRSELKEKENLEKTDDR 459
+ + ++D R E ++ + TS L++ E+E+ + ++ D+
Sbjct: 478 EQLKAKLDFFRSSIQIDLEKYSEQMEFGITSEKLLSAWREMEQAVELCGREREVQALVDK 537
Query: 460 ----KLEVCEVSKE---------LEVLRGELEEQKTATKQWKKDWYQSVKERNAAVAELK 506
+ + ++ + L+ L + + ++ +D + +
Sbjct: 538 MMALQTDSVDLQRNPLGRKHRGTLDDLEEQARDLYRRLRERPRDQRTPGDSNDMVRLLIL 597
Query: 507 QAQTENEALKEKLTSLEQELKVSEEALATAQNSLDSKLREHQALSNTIESMQKE 560
Q+ + + L + + +AL + + + + Q++
Sbjct: 598 AIQSFEKRVILIYDQLSKTVVCKRKALE-LSPKVKEVMNLMREDEKIVVRRQEK 650
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural
genomics, structural genomics consortium, SGC; 1.80A
{Toxoplasma gondii}
Length = 413
Score = 176 bits (448), Expect = 1e-48
Identities = 43/315 (13%), Positives = 98/315 (31%), Gaps = 51/315 (16%)
Query: 17 FDIKRFIQQGNFGDIYLVEEKQSHNTFVMK------------------------KVLREK 52
+ Q + ++++ +F + + K
Sbjct: 80 LVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIK 139
Query: 53 MPNTIER--------DIMVKSKCPYIVNLFYSFQDMN--HVYFIMEYVTG--GDFVTLLE 100
+ D++ + ++ + +DM +F+ + F +L
Sbjct: 140 NQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLL 199
Query: 101 NQP--HGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSAT 158
+ H L ++ + + LH G VH ++P +++L G + LT F
Sbjct: 200 SHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLV 259
Query: 159 QVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
+ + PE A +L + + H T + D W++G+ Y + P
Sbjct: 260 RDGASAVSPIGRGFAPPETTAERMLPFGQ--HHPTLMTFAFDTWTLGLAIYWIWCADLPN 317
Query: 219 NYETLDMTYSSILACDTEDTVSFPSSIRLSTAMVNFVQSLVQK-LDARLNMDQVLGHPVF 277
+ I F S + + ++ ++ + RL Q + P +
Sbjct: 318 TDDAALGGSEWI----------FRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEY 367
Query: 278 DCLDSDPPCIPPPSQ 292
+ L ++ P Q
Sbjct: 368 EQLRTELSAALPLYQ 382
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET:
824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A*
3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Length = 289
Score = 171 bits (435), Expect = 4e-48
Identities = 46/292 (15%), Positives = 104/292 (35%), Gaps = 48/292 (16%)
Query: 14 ASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIM-------VKSK 66
++F I G FG ++ ++ + +K+ + + E++ + V +
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 69
Query: 67 CPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLE--NQPHGYLSESKARFYIYELAQAVQ 124
++V F ++ + +H+ EY GG + + Y E++ + + ++ + ++
Sbjct: 70 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 129
Query: 125 YLHGLGYVHRDIKPDNMLLSATGHL-------------------KLTDFGSATQVDKNGR 165
Y+H + VH DIKP N+ +S T K+ D G T++
Sbjct: 130 YIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRIS---- 185
Query: 166 IKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDM 225
V G ++A EVL + + D++++ +
Sbjct: 186 -SPQVEEGDSRFLANEVL------QENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ-- 236
Query: 226 TYSSILACDTEDTVSFPSSIRLSTAMVNFVQSLVQK-LDARLNMDQVLGHPV 276
+ I P LS ++ ++ + R + ++ H V
Sbjct: 237 -WHEIRQGRLPR---IPQ--VLSQEFTELLKVMIHPDPERRPSAMALVKHSV 282
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2,
E.C.2.7.11.17, phosphorylation, AMPKK, metabolism,
binding, calmodulin-binding; HET: 609; 2.40A {Homo
sapiens}
Length = 298
Score = 170 bits (432), Expect = 1e-47
Identities = 71/298 (23%), Positives = 132/298 (44%), Gaps = 57/298 (19%)
Query: 19 IKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREK-------------------------- 52
+K I +G++G + L + + + MK + ++K
Sbjct: 17 LKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQP 76
Query: 53 --MPNTIERDIMVKSKC--PYIVNLF--YSFQDMNHVYFIMEYVTGGDFVTLLENQPHGY 106
+ ++I + K P +V L + +H+Y + E V G ++E
Sbjct: 77 RGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGP---VMEVPTLKP 133
Query: 107 LSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFG-SATQVDKNGR 165
LSE +ARFY +L + ++YLH +HRDIKP N+L+ GH+K+ DFG S +
Sbjct: 134 LSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDAL 193
Query: 166 IKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGS-CDLWSIGVVSYELLTGSTPFNYETLD 224
+ + VGTP ++APE L + ++G D+W++GV Y + G PF E +
Sbjct: 194 LSN--TVGTPAFMAPESL-----SETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIM 246
Query: 225 MTYSSILACDTEDTVSFPSSIRLSTAMVNFVQSLVQKL-----DARLNMDQVLGHPVF 277
+S I + + FP ++ ++ L+ ++ ++R+ + ++ HP
Sbjct: 247 CLHSKIKS----QALEFPDQPDIAED----LKDLITRMLDKNPESRIVVPEIKLHPWV 296
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase,
serine/threonine kinase, cyclin clathrine, membrane
trafficking, structural genomics; 2.10A {Homo sapiens}
Length = 337
Score = 171 bits (435), Expect = 1e-47
Identities = 66/319 (20%), Positives = 114/319 (35%), Gaps = 41/319 (12%)
Query: 17 FDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP--NTIER--DIMVK-SKCPYIV 71
++R + +G F +Y ++ S + +K++L + I + M K S P IV
Sbjct: 30 LRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIV 89
Query: 72 NLFYSFQDMNH--------VYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAV 123
+ + E G L + + G LS Y+ +AV
Sbjct: 90 QFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAV 149
Query: 124 QYLHGLG--YVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKS-----------IV 170
Q++H +HRD+K +N+LLS G +KL DFGSAT + I
Sbjct: 150 QHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEIT 209
Query: 171 PVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSI 230
TP Y PE+++ D+W++G + Y L PF D I
Sbjct: 210 RNTTPMYRTPEIIDLYSN----FPIGEKQDIWALGCILYLLCFRQHPFE----DGAKLRI 261
Query: 231 LACDTEDTVSFPSSIRLSTAMVNFVQS-LVQKLDARLNMDQVLGHP--VFDCLDSDPPCI 287
+ S P T + +++ L + RL++ +V+ + + +P
Sbjct: 262 VNGK----YSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNVNPKSP 317
Query: 288 PPPSQENKFHKKDKRKASP 306
E +
Sbjct: 318 ITELLEQNGGYGSATLSRG 336
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant,
catalytic domain, synthetic inhibitor, TRAN transferase
inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB:
4g34_A*
Length = 299
Score = 168 bits (427), Expect = 6e-47
Identities = 59/298 (19%), Positives = 123/298 (41%), Gaps = 46/298 (15%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIER-----DIMVKSKCPY 69
+DF+ + + +G FG ++ + K + +K++ E+ + K + P
Sbjct: 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 64
Query: 70 IVNLFYSFQDMN------------HVYFIMEYVTGGDFVTLLENQPHG-YLSESKARFYI 116
IV F ++ + N ++Y M+ + + + S
Sbjct: 65 IVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIF 124
Query: 117 YELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVP----- 171
++A+AV++LH G +HRD+KP N+ + +K+ DFG T +D++ ++++
Sbjct: 125 LQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAY 184
Query: 172 ------VGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYET-LD 224
VGT Y++PE + + Y+ D++S+G++ +ELL PF+ +
Sbjct: 185 ARHTGQVGTKLYMSPEQIH-------GNSYSHKVDIFSLGLILFELL---YPFSTQMERV 234
Query: 225 MTYSSILACDTEDTVSFPSSIRLSTAMVNFVQSLVQKL-DARLNMDQVLGHPVFDCLD 281
T + + P + VQ ++ R ++ + VF+ LD
Sbjct: 235 RTLTDVRNLKFP-----PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFEDLD 287
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain,
kinase and RNAse function, ATP binding ssRNA
dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo
sapiens}
Length = 432
Score = 171 bits (435), Expect = 1e-46
Identities = 57/287 (19%), Positives = 107/287 (37%), Gaps = 19/287 (6%)
Query: 1 KDVVKELRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTI-ER 59
D +E V F K + G G I + +K++L E E
Sbjct: 10 DDGDEETSVVIVGKISFCPKDVLGHGAEGTIVY-RGMFDNRDVAVKRILPECFSFADREV 68
Query: 60 DIMVKS-KCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYE 118
++ +S + P ++ F + +D Y +E +E Q + + +
Sbjct: 69 QLLRESDEHPNVIRYFCTEKDRQFQYIAIELC-AATLQEYVE-QKDFAHLGLEPITLLQQ 126
Query: 119 LAQAVQYLHGLGYVHRDIKPDNMLLSATGH-----LKLTDFGSATQVDKNGRIKSIV--P 171
+ +LH L VHRD+KP N+L+S ++DFG ++ S
Sbjct: 127 TTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGV 186
Query: 172 VGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSIL 231
GT ++APE+L + T + D++S G V Y +++ + ++L + +L
Sbjct: 187 PGTEGWIAPEMLS----EDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILL 242
Query: 232 ACDTEDTVSFPSSIRLSTAMVNFVQSLVQKL-DARLNMDQVLGHPVF 277
+ D + ++ ++ R + VL HP F
Sbjct: 243 GACSLDCLHPEKHE--DVIARELIEKMIAMDPQKRPSAKHVLKHPFF 287
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding
protein complex, transferase metal protein complex,
nucleus; HET: ANP; 2.65A {Homo sapiens}
Length = 305
Score = 167 bits (424), Expect = 2e-46
Identities = 62/314 (19%), Positives = 129/314 (41%), Gaps = 39/314 (12%)
Query: 17 FDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNT------IERDI--MVKSKCP 68
+ + + +G++G + V + ++ +K + ++K+ ++++I + + +
Sbjct: 7 YLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHK 66
Query: 69 YIVNLF--YSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYL 126
++ L ++ +Y +MEY G +L++ P +A Y +L ++YL
Sbjct: 67 NVIQLVDVLYNEEKQKMYMVMEYCVCGM-QEMLDSVPEKRFPVCQAHGYFCQLIDGLEYL 125
Query: 127 HGLGYVHRDIKPDNMLLSATGHLKLTDFG-SAT--QVDKNGRIKSIVPVGTPEYVAPEVL 183
H G VH+DIKP N+LL+ G LK++ G + + ++ G+P + PE+
Sbjct: 126 HSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRT--SQGSPAFQPPEIA 183
Query: 184 EWMEGNHGSDGYTGS-CDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFP 242
G D ++G D+WS GV Y + TG PF + + + +I + P
Sbjct: 184 N------GLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGS----YAIP 233
Query: 243 SSIRLSTAMVNFVQSLVQKL-----DARLNMDQVLGHPVFDC-LDSDPPCIPPPSQENKF 296
+ L++ + R ++ Q+ H F +P P +
Sbjct: 234 GD--CGPP----LSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPPAEAPVPIPPSPDTK 287
Query: 297 HKKDKRKASPSLKA 310
+ P L+
Sbjct: 288 DRWRSMTVVPYLED 301
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET:
YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A*
2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A*
2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A*
2x8i_A* 2xey_A* 2xez_A* ...
Length = 276
Score = 164 bits (418), Expect = 6e-46
Identities = 64/274 (23%), Positives = 117/274 (42%), Gaps = 30/274 (10%)
Query: 17 FDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIER-----DIMVKSKCPYIV 71
+D+ + + +G +G++ L + + +K V ++ + E I +V
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 68
Query: 72 NLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGY 131
+ ++ N Y +EY +GG+ +E P + E A+ + ++L V YLHG+G
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 132 VHRDIKPDNMLLSATGHLKLTDFG-SATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNH 190
HRDIKP+N+LL +LK++DFG + N GT YVAPE+L+
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK------ 180
Query: 191 GSDGYTGS-CDLWSIGVVSYELLTGSTPFNYETLDM-TYSSILACDTEDTVSFPSSIRLS 248
+ D+WS G+V +L G P++ + YS ++
Sbjct: 181 -RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK----TYLNPWKKID 235
Query: 249 TAMVNFVQSLVQKL-----DARLNMDQVLGHPVF 277
+A +L+ K+ AR+ + + +
Sbjct: 236 SA----PLALLHKILVENPSARITIPDIKKDRWY 265
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1;
protein-nucleotide complex, ATP-binding, endoplasmic
reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces
cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A*
3sdj_A*
Length = 434
Score = 169 bits (429), Expect = 8e-46
Identities = 63/326 (19%), Positives = 124/326 (38%), Gaps = 30/326 (9%)
Query: 17 FDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTI-ERDIMVKSK-CPYIVNLF 74
++ + G+ G + + +K++L + + E ++ +S P ++ +
Sbjct: 17 VVSEKILGYGSSGTVVF-QGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYY 75
Query: 75 YSFQDMNHVYFIMEYVTGG--DFVT--LLENQPHGYLSESKARFYIYELAQAVQYLHGLG 130
S +Y +E D V + ++ E + ++A V +LH L
Sbjct: 76 CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK 135
Query: 131 YVHRDIKPDNMLLSATGH-------------LKLTDFGSATQVDKNGRIKSIV---PVGT 174
+HRD+KP N+L+S + + ++DFG ++D P GT
Sbjct: 136 IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGT 195
Query: 175 PEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPFNYETLDMTYSSILAC 233
+ APE+LE T S D++S+G V Y +L+ G PF + S+I+
Sbjct: 196 SGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKY--SRESNIIRG 253
Query: 234 D-TEDTVSFPSSIRLSTAMVNFVQSLVQKL-DARLNMDQVLGHPVFDCLDSDPPCIPPPS 291
+ D + L + + ++ R +VL HP+F + S
Sbjct: 254 IFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWPKSKKLEFLLKVS 313
Query: 292 QENKFHKKDKRKASPSLKAFQKEGRY 317
++ +++ S L F +
Sbjct: 314 --DRLEIENRDPPSALLMKFDAGSDF 337
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas;
spindle assembly checkpoint, mitosis, kinase,
activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo
sapiens}
Length = 365
Score = 166 bits (421), Expect = 2e-45
Identities = 36/250 (14%), Positives = 80/250 (32%), Gaps = 35/250 (14%)
Query: 4 VKELRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK----KVLREKMPN---- 55
+K + + + + + +G F +Y + ++ + KV + P
Sbjct: 54 IKPKTEFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYI 113
Query: 56 -TIERDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGG---DFVTLLENQPHGYLSESK 111
T + + S + + + N + E + G + + L +N P + +
Sbjct: 114 GTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGL 173
Query: 112 ARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLS-----------ATGHLKLTDFGSATQV 160
+ + ++ +H +H DIKPDN +L + L L D G + +
Sbjct: 174 VISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDM 233
Query: 161 ---DKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTP 217
K + T + E+L + + D + + Y +L G+
Sbjct: 234 KLFPKGTIFTAK--CETSGFQCVEMLS-------NKPWNYQIDYFGVAATVYCMLFGTYM 284
Query: 218 FNYETLDMTY 227
Sbjct: 285 KVKNEGGECK 294
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine
protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3,
ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A*
1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Length = 328
Score = 164 bits (418), Expect = 2e-45
Identities = 79/303 (26%), Positives = 132/303 (43%), Gaps = 26/303 (8%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNT----IER--DI 61
+ ++ + + I +GNF + L + +K + + ++ T + R I
Sbjct: 8 ADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRI 67
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQ 121
M P IV LF + +Y IMEY +GG+ L HG + E +AR ++
Sbjct: 68 MKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVA--HGRMKEKEARSKFRQIVS 125
Query: 122 AVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPE 181
AVQY H VHRD+K +N+LL A ++K+ DFG + + G++ + G P Y APE
Sbjct: 126 AVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDA--FCGAPPYAAPE 183
Query: 182 VLEWMEGNHGSDGYTGS-CDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVS 240
+ + Y G D+WS+GV+ Y L++GS PF+ + L +L
Sbjct: 184 LFQ-------GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK----YR 232
Query: 241 FPSSIRLSTAMVNFVQS-LVQKLDARLNMDQVLGHPVFDCLDSDPPCIPPPSQENKFHKK 299
P +ST N ++ LV R ++Q++ + + P +
Sbjct: 233 IPFY--MSTDCENLLKRFLVLNPIKRGTLEQIMKDRWI-NAGHEEDELKPFVEPELDISD 289
Query: 300 DKR 302
KR
Sbjct: 290 QKR 292
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma
gondii} PDB: 3q5z_A*
Length = 371
Score = 165 bits (418), Expect = 4e-45
Identities = 49/322 (15%), Positives = 91/322 (28%), Gaps = 58/322 (18%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPN-------------------- 55
+ ++ G+ ++LV + + F +K +
Sbjct: 63 KLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGE 122
Query: 56 -----------TIERDIMVKSKCPYIVNLFYSFQDMN--HVYFIMEYVTG--GDFVTLLE 100
+ D + P L D + +M + + L+
Sbjct: 123 SPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLD 182
Query: 101 NQP--HGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSAT 158
G +L + L G VH PDN+ + G L L D +
Sbjct: 183 FVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDGRLMLGDVSALW 242
Query: 159 QVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
+V G Y E L + +T + + W +G+ Y + PF
Sbjct: 243 KVGTRGP----ASSVPVTYAPREFLN-----ASTATFTHALNAWQLGLSIYRVWCLFLPF 293
Query: 219 NYETLDMTYSSILACD---TEDTVSFPSSIRLSTAMVNFVQSLVQKL-----DARLNMDQ 270
T + S D+++F S L V++L+ + RL +
Sbjct: 294 GLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDF----VKTLIGRFLNFDRRRRLLPLE 349
Query: 271 VLGHPVFDCLDSDPPCIPPPSQ 292
+ P F L ++ Q
Sbjct: 350 AMETPEFLQLQNEISSSLSTGQ 371
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint,
transferase-transferase inhib complex; HET: S25; 1.60A
{Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A*
2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Length = 323
Score = 161 bits (410), Expect = 2e-44
Identities = 67/305 (21%), Positives = 123/305 (40%), Gaps = 33/305 (10%)
Query: 17 FDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIER-----DIMVKSKCPYIV 71
+D+ + + +G +G++ L + + +K V ++ + E I +V
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 68
Query: 72 NLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGY 131
+ ++ N Y +EY +GG+ +E P + E A+ + ++L V YLHG+G
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 132 VHRDIKPDNMLLSATGHLKLTDFG-SATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNH 190
HRDIKP+N+LL +LK++DFG + N GT YVAPE+L+
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK------ 180
Query: 191 GSDGYTGS-CDLWSIGVVSYELLTGSTPFNYETLDM-TYSSILACDTEDTVSFPSSIRLS 248
+ D+WS G+V +L G P++ + YS ++
Sbjct: 181 -RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK----TYLNPWKKID 235
Query: 249 TAMVNFVQSLVQKL-----DARLNMDQVLGHPVFDC---LDSDPPCIPPPSQENKFHKKD 300
+A +L+ K+ AR+ + + ++ + P +
Sbjct: 236 SA----PLALLHKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRVTSGGVSESPSGFS 291
Query: 301 KRKAS 305
K S
Sbjct: 292 KHIQS 296
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor,
spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis
compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB:
3kga_A* 3m42_A*
Length = 299
Score = 159 bits (405), Expect = 6e-44
Identities = 64/304 (21%), Positives = 124/304 (40%), Gaps = 53/304 (17%)
Query: 19 IKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMVK-SKCPYIVNLFYSF 77
+ + G G + + K++ F +K + E ++ + S+CP+IV + +
Sbjct: 22 TSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR-EVELHWRASQCPHIVRIVDVY 80
Query: 78 QDM----NHVYFIMEYVTGGDFVTLLE---NQPHGYLSESKARFYIYELAQAVQYLHGLG 130
+++ + +ME + GG+ L ++ +E +A + + +A+QYLH +
Sbjct: 81 ENLYAGRKCLLIVMECLDGGE---LFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN 137
Query: 131 YVHRDIKPDNMLLSATGH---LKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWME 187
HRD+KP+N+L ++ LKLTDFG A E
Sbjct: 138 IAHRDVKPENLLYTSKRPNAILKLTDFG----------------------FAKETTG--- 172
Query: 188 GNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSI-- 245
+ Y SCD+WS+GV+ Y LL G PF + FP+
Sbjct: 173 -----EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWS 227
Query: 246 RLSTAMVNFVQSLVQKLD--ARLNMDQVLGHP---VFDCLDSDPPCIPPPSQENKFHKKD 300
+S + +++L++ + R+ + + + HP + P +E+K +D
Sbjct: 228 EVSEEVKMLIRNLLKT-EPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKERWED 286
Query: 301 KRKA 304
++
Sbjct: 287 VKEE 290
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling,
transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A
3zuu_A 3uc4_A 3ujg_A 3udb_A
Length = 361
Score = 161 bits (409), Expect = 8e-44
Identities = 82/296 (27%), Positives = 127/296 (42%), Gaps = 30/296 (10%)
Query: 17 FDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREK-MPNTIERDIMVKSKC--PYIVNL 73
+D + I GNFG L+ +K + +K + R + ++R+I+ P IV
Sbjct: 22 YDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRF 81
Query: 74 FYSFQDMNHVYFIMEYVTGGD-FVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYV 132
H+ IMEY +GG+ + + G SE +ARF+ +L V Y H +
Sbjct: 82 KEVILTPTHLAIIMEYASGGELYERICN---AGRFSEDEARFFFQQLLSGVSYCHSMQIC 138
Query: 133 HRDIKPDNMLL--SATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNH 190
HRD+K +N LL S LK+ DFG + + + KS VGTP Y+APEVL
Sbjct: 139 HRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS--TVGTPAYIAPEVLL------ 190
Query: 191 GSDGYTGS-CDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRLST 249
Y G D+WS GV Y +L G+ PF Y + S P IR+S
Sbjct: 191 -RQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISP 249
Query: 250 AMVNFVQSLVQKL-----DARLNMDQVLGHPVFDCLDSDPPCIPPPSQENKFHKKD 300
L+ ++ R+++ ++ H F L + P + S ++
Sbjct: 250 E----CCHLISRIFVADPATRISIPEIKTHSWF--LKNLPADLMNESNTGSQFQEP 299
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer,
leukemia, transferase, ATP-binding, proto- oncogene,
phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Length = 312
Score = 159 bits (404), Expect = 1e-43
Identities = 60/301 (19%), Positives = 115/301 (38%), Gaps = 42/301 (13%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPN--------TIER 59
+ + +++ + + +G FG ++ +K + R ++ T
Sbjct: 24 KDREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPL 83
Query: 60 DIMV------KSKCPYIVNLFYSFQDMNHVYFIMEY-VTGGDFVTLLENQPHGYLSESKA 112
++ + P ++ L F+ ++E + D + G L E +
Sbjct: 84 EVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITE--KGPLGEGPS 141
Query: 113 RFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSA-TGHLKLTDFGSATQVDKNGRIKSIVP 171
R + ++ A+Q+ H G VHRDIK +N+L+ G KL DFGS + +
Sbjct: 142 RCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALL-HDEPYT--DF 198
Query: 172 VGTPEYVAPEVLEWMEGNHGSDGYTG-SCDLWSIGVVSYELLTGSTPFNYETLDMTYSSI 230
GT Y PE + Y +WS+G++ Y+++ G PF I
Sbjct: 199 DGTRVYSPPEWIS-------RHQYHALPATVWSLGILLYDMVCGDIPFE------RDQEI 245
Query: 231 LACDTEDTVSFPSSIRLSTAMVNFVQS-LVQKLDARLNMDQVLGHPVFDCLDSDPPCIPP 289
L + + FP+ +S ++ L K +R +++++L P D P P
Sbjct: 246 LEAE----LHFPA--HVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPAEDVPLNPS 299
Query: 290 P 290
Sbjct: 300 K 300
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2;
ATP-binding, cholesterol biosynthesis, fatty acid
biosynthesis;kinase, lipid synthesis; 1.85A {Homo
sapiens} PDB: 3aqv_A* 2yza_A*
Length = 276
Score = 157 bits (400), Expect = 2e-43
Identities = 71/275 (25%), Positives = 124/275 (45%), Gaps = 36/275 (13%)
Query: 17 FDIKRFIQQGNFGDIYLVEEKQSHNTFVMK-----KVLREKMPNTIERDI--MVKSKCPY 69
+ + + G FG + + E + + + +K K+ + I+R+I + + P+
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPH 72
Query: 70 IVNLFYSFQDMNHVYFIMEYVTGGD-FVTLLENQPHGYLSESKARFYIYELAQAVQYLHG 128
I+ L+ + +MEYV+GG+ F + + HG + E +AR ++ AV Y H
Sbjct: 73 IIKLYQVISTPTDFFMVMEYVSGGELFDYICK---HGRVEEMEARRLFQQILSAVDYCHR 129
Query: 129 LGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEG 188
VHRD+KP+N+LL A + K+ DFG + + +++ G+P Y APEV+
Sbjct: 130 HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRT--SCGSPNYAAPEVIS---- 183
Query: 189 NHGSDGYTGS-CDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRL 247
Y G D+WS GV+ Y LL G+ PF+ E + + I P L
Sbjct: 184 ---GRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGV----FYIPEY--L 234
Query: 248 STAMVNFVQSLVQKL-----DARLNMDQVLGHPVF 277
+ + V +L+ + R + + H F
Sbjct: 235 NRS----VATLLMHMLQVDPLKRATIKDIREHEWF 265
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1,
peptide drug, prostate cancer, transferase; HET: ANP;
1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A*
3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A*
2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A*
3cxw_A* 3cy3_A* 2bik_B* ...
Length = 320
Score = 159 bits (403), Expect = 2e-43
Identities = 70/316 (22%), Positives = 122/316 (38%), Gaps = 62/316 (19%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREK--------MPNTIER 59
++K S + + + G FG +Y + +K V +++ +
Sbjct: 36 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 95
Query: 60 DI----MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGG----DFVTLLENQPHGYLSESK 111
++ V S ++ L F+ + I+E DF+T G L E
Sbjct: 96 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-----RGALQEEL 150
Query: 112 ARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSA-TGHLKLTDFGSATQVDKNGRIKSIV 170
AR + +++ +AV++ H G +HRDIK +N+L+ G LKL DFGS + K+
Sbjct: 151 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYT--D 207
Query: 171 PVGTPEYVAPEVLEWMEGNHGSDGYTG-SCDLWSIGVVSYELLTGSTPFNYETLDMTYSS 229
GT Y PE + Y G S +WS+G++ Y+++ G PF ++
Sbjct: 208 FDGTRVYSPPEWIR-------YHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EE 254
Query: 230 ILACDTEDTVSFPSSIRLSTAMVNFVQSLVQKL-----DARLNMDQVLGH--------PV 276
I+ V F R+S+ Q L++ R +++ H P
Sbjct: 255 IIRGQ----VFFRQ--RVSSE----CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQ 304
Query: 277 FDCLDSDPPCIPPPSQ 292
P PS+
Sbjct: 305 ETAEIHLHSLSPGPSK 320
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein
serine/threonine kinase, S based drug design, MAP3K14,
transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A*
4g3c_A 4dn5_A*
Length = 336
Score = 156 bits (396), Expect = 2e-42
Identities = 61/265 (23%), Positives = 116/265 (43%), Gaps = 25/265 (9%)
Query: 20 KRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMVKSKC--PYIVNLFYSF 77
+ + +G+FG+++ +++KQ+ +KKV ++ +++ + P IV L+ +
Sbjct: 63 QPRVGRGSFGEVHRMKDKQTGFQCAVKKV---RLEVFRVEELVACAGLSSPRIVPLYGAV 119
Query: 78 QDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIK 137
++ V ME + GG L+ + G L E +A +Y+ + + ++YLH +H D+K
Sbjct: 120 REGPWVNIFMELLEGGSLGQLI--KQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVK 177
Query: 138 PDNMLLSATG-HLKLTDFGSATQVDKNGRIKSIVP----VGTPEYVAPEVLEWMEGNHGS 192
DN+LLS+ G L DFG A + +G KS++ GT ++APEV+
Sbjct: 178 ADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVM-------G 230
Query: 193 DGYTGSCDLWSIGVVSYELLTGSTPF-NYETLDMTYSSILACDTEDTVSFPSSIRLSTAM 251
D+WS + +L G P+ Y L +E +
Sbjct: 231 KPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRG----PLCLKIASEPPPIREIPPSCAPLT 286
Query: 252 VNFVQSLVQK-LDARLNMDQVLGHP 275
+Q ++K R + ++
Sbjct: 287 AQAIQEGLRKEPVHRASAMELRRKV 311
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase,
PASK, protein kinase, drug discovery, ATP-bindin kinase,
nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Length = 335
Score = 155 bits (394), Expect = 5e-42
Identities = 64/275 (23%), Positives = 115/275 (41%), Gaps = 38/275 (13%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREK----------MPNTIER--DIMV 63
+ + G FG ++ +K+ + V+K + +EK + I+
Sbjct: 25 KYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILS 84
Query: 64 KSKCPYIVNLFYSFQDMNHVYFIME-YVTGGDFVTLLENQPHGYLSESKARFYIYELAQA 122
+ + I+ + F++ +ME + +G D ++ H L E A + +L A
Sbjct: 85 RVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDR--HPRLDEPLASYIFRQLVSA 142
Query: 123 VQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV 182
V YL +HRDIK +N++++ +KL DFGSA +++ GT EY APEV
Sbjct: 143 VGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFY--TFCGTIEYCAPEV 200
Query: 183 LEWMEGNHGSDGYTGS-CDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSF 241
L GN Y G ++WS+GV Y L+ PF + +
Sbjct: 201 L---MGN----PYRGPELEMWSLGVTLYTLVFEENPFC------ELEETVEAA----IHP 243
Query: 242 PSSIRLSTAMVNFVQS-LVQKLDARLNMDQVLGHP 275
P +S +++ V L + R +++++ P
Sbjct: 244 PYL--VSKELMSLVSGLLQPVPERRTTLEKLVTDP 276
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A
{Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A
2fh9_A 3mn3_A
Length = 275
Score = 153 bits (389), Expect = 5e-42
Identities = 63/275 (22%), Positives = 125/275 (45%), Gaps = 35/275 (12%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMK-----KVLREKMPNTIER--DIMVKSKCP 68
++ I + + +G+F + L + +K + + M IER + + P
Sbjct: 14 NYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 69 YIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHG 128
+I+ L+ + + + ++EY F +++ +SE +AR + ++ AV+Y H
Sbjct: 74 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQ---RDKMSEQEARRFFQQIISAVEYCHR 130
Query: 129 LGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEG 188
VHRD+KP+N+LL ++K+ DFG + + +K+ G+P Y APEV+
Sbjct: 131 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKT--SCGSPNYAAPEVIS---- 184
Query: 189 NHGSDGYTGS-CDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRL 247
Y G D+WS GV+ Y +L PF+ E++ + + +I + P L
Sbjct: 185 ---GKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGV----YTLPKF--L 235
Query: 248 STAMVNFVQSLVQKL-----DARLNMDQVLGHPVF 277
S L++++ R+++ +++ F
Sbjct: 236 SPG----AAGLIKRMLIVNPLNRISIHEIMQDDWF 266
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding,
nucleotide-binding, phosphoprotei
serine/threonine-protein kinase, transferase; 2.80A
{Schizosaccharomyces pombe}
Length = 336
Score = 152 bits (385), Expect = 8e-41
Identities = 70/297 (23%), Positives = 132/297 (44%), Gaps = 38/297 (12%)
Query: 17 FDIKRFIQQGNFGDIYLVEEKQSHNTFVMK-----KVLREKMPNTIER--DIMVKSKCPY 69
+ I+ + +G+FG + L ++ +K + + M +ER + + P+
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPH 70
Query: 70 IVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGL 129
I+ L+ + ++EY G F ++E ++E + R + ++ A++Y H
Sbjct: 71 IIKLYDVITTPTDIVMVIEYAGGELFDYIVE---KKRMTEDEGRRFFQQIICAIEYCHRH 127
Query: 130 GYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGN 189
VHRD+KP+N+LL ++K+ DFG + + +K+ G+P Y APEV+
Sbjct: 128 KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKT--SCGSPNYAAPEVIN----- 180
Query: 190 HGSDGYTGS-CDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRLS 248
Y G D+WS G+V Y +L G PF+ E + + + +C P LS
Sbjct: 181 --GKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCV----YVMPDF--LS 232
Query: 249 TAMVNFVQSLVQKL-----DARLNMDQVLGHPVFDCLDSDPPCIPPPSQENKFHKKD 300
QSL++++ R+ + ++ P F + + P P +E + D
Sbjct: 233 PG----AQSLIRRMIVADPMQRITIQEIRRDPWF---NVNLPDYLRPMEEVQGSYAD 282
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat
protein, ADA protein, ATP-binding, cell cycle, kinase,
nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo
sapiens} PDB: 2wtk_B*
Length = 389
Score = 151 bits (384), Expect = 3e-40
Identities = 70/331 (21%), Positives = 126/331 (38%), Gaps = 40/331 (12%)
Query: 14 ASDFDIKRFIQQG--NFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDI------MVKS 65
+++ I +G + + L K + ++++ E N + +
Sbjct: 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLF 83
Query: 66 KCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQY 125
P IV +F N ++ + ++ G L+ ++E + + + +A+ Y
Sbjct: 84 NHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDY 143
Query: 126 LHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVP------VGTPEYVA 179
+H +GYVHR +K ++L+S G + L+ S + +G+ + +V V +++
Sbjct: 144 IHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLS 203
Query: 180 PEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFN--------YETLDMTYSSIL 231
PEVL+ GY D++S+G+ + EL G PF E L+ T +L
Sbjct: 204 PEVLQ-----QNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLL 258
Query: 232 ACDTEDTVSFPSSIRLSTAMVNFVQSLVQKLDARLNMDQVLGHP-----------VFDCL 280
T S S A SL N D V CL
Sbjct: 259 DTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCL 318
Query: 281 DSDPPCIPPPSQ--ENKFHKKDKRKASPSLK 309
+P P S + F K+ KR+AS +L
Sbjct: 319 QRNPDARPSASTLLNHSFFKQIKRRASEALP 349
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase,
metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Length = 295
Score = 148 bits (375), Expect = 6e-40
Identities = 59/224 (26%), Positives = 106/224 (47%), Gaps = 14/224 (6%)
Query: 2 DVVKELRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKV--LREKMPNTIER 59
D +L + + + + + +G +G +Y + + +K++ + +
Sbjct: 9 DCESDLLEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHE 68
Query: 60 DIMVKSKC--PYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYL--SESKARFY 115
+I + IV SF + + ME V GG LL ++ G L +E FY
Sbjct: 69 EIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSK-WGPLKDNEQTIGFY 127
Query: 116 IYELAQAVQYLHGLGYVHRDIKPDNMLL-SATGHLKLTDFGSATQVDKNGRIKSIVPVGT 174
++ + ++YLH VHRDIK DN+L+ + +G LK++DFG++ ++ GT
Sbjct: 128 TKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETF-TGT 186
Query: 175 PEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
+Y+APE++ + G GY + D+WS+G E+ TG PF
Sbjct: 187 LQYMAPEII-----DKGPRGYGKAADIWSLGCTIIEMATGKPPF 225
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7,
activated mutant, ATP-binding, structural genomics,
NPPSFA; 2.45A {Homo sapiens}
Length = 318
Score = 147 bits (373), Expect = 2e-39
Identities = 69/273 (25%), Positives = 119/273 (43%), Gaps = 18/273 (6%)
Query: 12 VSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIER-----DIMVKS- 65
+D + + G G ++ + +++ + +K++ R +R D+++KS
Sbjct: 22 AEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSH 81
Query: 66 KCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQY 125
CPYIV F +F V+ ME + L+ + G + E + +A+ Y
Sbjct: 82 DCPYIVQCFGTFITNTDVFIAMELMGTC--AEKLKKRMQGPIPERILGKMTVAIVKALYY 139
Query: 126 LHG-LGYVHRDIKPDNMLLSATGHLKLTDFG-SATQVDKNGRIKSIVPVGTPEYVAPEVL 183
L G +HRD+KP N+LL G +KL DFG S VD + +S G Y+APE +
Sbjct: 140 LKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRS---AGCAAYMAPERI 196
Query: 184 EWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPS 243
+ + Y D+WS+G+ EL TG P Y+ + + E+ P
Sbjct: 197 DPPDPTKP--DYDIRADVWSLGISLVELATGQFP--YKNCKTDFEVLTKVLQEEPPLLPG 252
Query: 244 SIRLSTAMVNFVQSLVQKL-DARLNMDQVLGHP 275
+ S +FV+ + K R +++L H
Sbjct: 253 HMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHS 285
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase,
nucleotide-binding, staurosporine-binding,
serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A
{Rattus norvegicus}
Length = 476
Score = 151 bits (383), Expect = 2e-39
Identities = 69/293 (23%), Positives = 126/293 (43%), Gaps = 37/293 (12%)
Query: 17 FDIKRFIQQGNFGDIYLVEEKQSHNTFVMK-----KVLREKMPNTIER--DIMVKSKCPY 69
+ + + G FG + + + + + + +K K+ + I R + + P+
Sbjct: 18 YILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPH 77
Query: 70 IVNLFYSFQDMNHVYFIMEYVTGGD-FVTLLENQPHGYLSESKARFYIYELAQAVQYLHG 128
I+ L+ + ++ +MEYV+GG+ F + + +G L E ++R ++ V Y H
Sbjct: 78 IIKLYQVISTPSDIFMVMEYVSGGELFDYICK---NGRLDEKESRRLFQQILSGVDYCHR 134
Query: 129 LGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEG 188
VHRD+KP+N+LL A + K+ DFG + + +++ G+P Y APEV+
Sbjct: 135 HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRT--SCGSPNYAAPEVIS---- 188
Query: 189 NHGSDGYTGS-CDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIRL 247
Y G D+WS GV+ Y LL G+ PF+ + + + I P L
Sbjct: 189 ---GRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGI----FYTPQY--L 239
Query: 248 STAMVNFVQSLVQKL-----DARLNMDQVLGHPVFDCLDSDPPCIPPPSQENK 295
+ + V SL++ + R + + H F D P +
Sbjct: 240 NPS----VISLLKHMLQVDPMKRATIKDIREHEWF-KQDLPKYLFPEDPSYSS 287
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI,
structural genomics, protein structure initiative; HET:
TPO; 2.20A {Homo sapiens}
Length = 314
Score = 146 bits (370), Expect = 4e-39
Identities = 75/283 (26%), Positives = 132/283 (46%), Gaps = 22/283 (7%)
Query: 1 KDVVKELRQKNVSASD----FDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNT 56
+ +K+L + + FD+ + +G++G +Y K++ +K+V E
Sbjct: 12 RRQLKKLDE-DSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQE 70
Query: 57 IER--DIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARF 114
I + IM + P++V + S+ ++ +MEY G ++ + L+E +
Sbjct: 71 IIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRN-KTLTEDEIAT 129
Query: 115 YIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGT 174
+ + ++YLH + +HRDIK N+LL+ GH KL DFG A Q+ + K +GT
Sbjct: 130 ILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLT-DTMAKRNTVIGT 188
Query: 175 PEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMT-YSSILAC 233
P ++APEV++ GY D+WS+G+ + E+ G P+ D+ +I
Sbjct: 189 PFWMAPEVIQ-------EIGYNCVADIWSLGITAIEMAEGKPPY----ADIHPMRAIFMI 237
Query: 234 DTEDTVSFPSSIRLSTAMVNFV-QSLVQKLDARLNMDQVLGHP 275
T +F S +FV Q LV+ + R Q+L HP
Sbjct: 238 PTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHP 280
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast);
two-LOBE protein kinase fold, ATP-binding, nucleotid
binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens}
PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A*
3ggf_A* 2xik_A*
Length = 303
Score = 145 bits (368), Expect = 7e-39
Identities = 62/210 (29%), Positives = 104/210 (49%), Gaps = 16/210 (7%)
Query: 14 ASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTI-----ERDIMVKSKCP 68
F I +G+FG+++ + ++ +K + E+ + I E ++ + P
Sbjct: 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 80
Query: 69 YIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHG 128
Y+ + S+ ++ IMEY+ GG + LLE P L E++ + E+ + + YLH
Sbjct: 81 YVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP---LDETQIATILREILKGLDYLHS 137
Query: 129 LGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEG 188
+HRDIK N+LLS G +KL DFG A Q+ ++ VGTP ++APEV++
Sbjct: 138 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTF-VGTPFWMAPEVIK---- 192
Query: 189 NHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
Y D+WS+G+ + EL G P
Sbjct: 193 ---QSAYDSKADIWSLGITAIELARGEPPH 219
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell
cycle progression, phosphorylation, disease mutation,
nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB:
4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Length = 302
Score = 144 bits (366), Expect = 1e-38
Identities = 59/265 (22%), Positives = 117/265 (44%), Gaps = 14/265 (5%)
Query: 17 FDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTI----ERDIMVKSKCPYIVN 72
++I + G FG +Y + K++ K + + E +I+ PYIV
Sbjct: 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVK 80
Query: 73 LFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYV 132
L ++ ++ ++E+ GG ++ G L+E + + ++ +A+ +LH +
Sbjct: 81 LLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRG-LTEPQIQVVCRQMLEALNFLHSKRII 139
Query: 133 HRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGS 192
HRD+K N+L++ G ++L DFG + + K +GTP ++APEV+
Sbjct: 140 HRDLKAGNVLMTLEGDIRLADFGVSAKN-LKTLQKRDSFIGTPYWMAPEVVMCETMKDT- 197
Query: 193 DGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMT-YSSILACDTEDTVSFPSSIRLSTAM 251
Y D+WS+G+ E+ P ++ +L D + + + S
Sbjct: 198 -PYDYKADIWSLGITLIEMAQIEPPH----HELNPMRVLLKIAKSDPPTLLTPSKWSVEF 252
Query: 252 VNFV-QSLVQKLDARLNMDQVLGHP 275
+F+ +L + + R + Q+L HP
Sbjct: 253 RDFLKIALDKNPETRPSAAQLLEHP 277
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine
kinase, transferase; 1.80A {Rattus norvegicus} SCOP:
d.144.1.7 PDB: 3fpq_A
Length = 290
Score = 143 bits (362), Expect = 3e-38
Identities = 56/274 (20%), Positives = 115/274 (41%), Gaps = 32/274 (11%)
Query: 19 IKRFIQQGNFGDIYLVEEKQSHNTFVMKKV-LREKMPNTIER-----DIMVKSKCPYIVN 72
I +G+F +Y + ++ ++ R+ + +R +++ + P IV
Sbjct: 30 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVR 89
Query: 73 LFYSFQDM----NHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHG 128
+ S++ + + E +T G T L+ + R + ++ + +Q+LH
Sbjct: 90 FYDSWESTVKGKKCIVLVTELMTSGTLKTYLKR--FKVMKIKVLRSWCRQILKGLQFLHT 147
Query: 129 LGY--VHRDIKPDNMLLSA-TGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEW 185
+HRD+K DN+ ++ TG +K+ D G AT + K+++ GTPE++APE+ E
Sbjct: 148 RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFA-KAVI--GTPEFMAPEMYE- 203
Query: 186 MEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF-NYETLDMTYSSILACDTEDTVSFPSS 244
+ Y S D+++ G+ E+ T P+ + Y + T
Sbjct: 204 -------EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRV----TSGVKPASFD 252
Query: 245 IRLSTAMVNFVQS-LVQKLDARLNMDQVLGHPVF 277
+ ++ + Q D R ++ +L H F
Sbjct: 253 KVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFF 286
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant,
structural genomics consortium, SCG, binding,
nucleotide-binding, phosphoprotein; HET: STU; 2.26A
{Homo sapiens} PDB: 3enm_A
Length = 290
Score = 142 bits (361), Expect = 5e-38
Identities = 61/275 (22%), Positives = 112/275 (40%), Gaps = 19/275 (6%)
Query: 11 NVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKV---LREKMPNTIERDI---MVK 64
V A D + + +G +G + + S +K++ + + + D+ M
Sbjct: 3 EVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRT 62
Query: 65 SKCPYIVNLFYSFQDMNHVYFIMEYVTGG-DFVTLLENQPHGYLSESKARFYIYELAQAV 123
CP+ V + + V+ ME + D + E + +A+
Sbjct: 63 VDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKAL 122
Query: 124 QYLHG-LGYVHRDIKPDNMLLSATGHLKLTDFG-SATQVDKNGRIKSIVPVGTPEYVAPE 181
++LH L +HRD+KP N+L++A G +K+ DFG S VD + G Y+APE
Sbjct: 123 EHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDID---AGCKPYMAPE 179
Query: 182 VLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSF 241
+ GY+ D+WS+G+ EL P Y++ + + E +
Sbjct: 180 RI---NPELNQKGYSVKSDIWSLGITMIELAILRFP--YDSWGTPFQQLKQVVEEPSPQL 234
Query: 242 PSSIRLSTAMVNFVQSLVQK-LDARLNMDQVLGHP 275
P+ + S V+F ++K R +++ HP
Sbjct: 235 PAD-KFSAEFVDFTSQCLKKNSKERPTYPELMQHP 268
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP
complex, transferase; HET: ANP; 2.30A {Homo sapiens}
PDB: 3alo_A*
Length = 327
Score = 142 bits (361), Expect = 1e-37
Identities = 72/278 (25%), Positives = 118/278 (42%), Gaps = 21/278 (7%)
Query: 11 NVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKV---LREKMPNTIERDI---MVK 64
+ +A D I +G +G + + K S +K++ + EK + D+ M
Sbjct: 18 DFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRS 77
Query: 65 SKCPYIVNLFYSFQDMNHVYFIMEYVTGG--DFVTLLENQPHGYLSESKARFYIYELAQA 122
S CPYIV + + + ME ++ F + + + E +A
Sbjct: 78 SDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKA 137
Query: 123 VQYLHG-LGYVHRDIKPDNMLLSATGHLKLTDFG-SATQVDKNGRIKSIVPVGTPEYVAP 180
+ +L L +HRDIKP N+LL +G++KL DFG S VD + + G Y+AP
Sbjct: 138 LNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRD---AGCRPYMAP 194
Query: 181 EVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTED--T 238
E + + + GY D+WS+G+ YEL TG P Y + + + D
Sbjct: 195 ERI---DPSASRQGYDVRSDVWSLGITLYELATGRFP--YPKWNSVFDQLTQVVKGDPPQ 249
Query: 239 VSFPSSIRLSTAMVNFVQSLVQKL-DARLNMDQVLGHP 275
+S S + +NFV + K R ++L HP
Sbjct: 250 LSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHP 287
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein
kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Length = 326
Score = 141 bits (358), Expect = 2e-37
Identities = 55/216 (25%), Positives = 100/216 (46%), Gaps = 15/216 (6%)
Query: 14 ASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKV-LREKMPNTIERDIMV---KSKCPY 69
A F++ + G +G +Y ++ +K + + I+++I + S
Sbjct: 23 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRN 82
Query: 70 IVNLFYSF------QDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAV 123
I + +F + ++ +ME+ G L++N L E + E+ + +
Sbjct: 83 IATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGL 142
Query: 124 QYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDK-NGRIKSIVPVGTPEYVAPEV 182
+LH +HRDIK N+LL+ +KL DFG + Q+D+ GR + +GTP ++APEV
Sbjct: 143 SHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTF--IGTPYWMAPEV 200
Query: 183 LEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
+ E Y DLWS+G+ + E+ G+ P
Sbjct: 201 IACDENPDA--TYDFKSDLWSLGITAIEMAEGAPPL 234
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension,
transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Length = 303
Score = 140 bits (355), Expect = 3e-37
Identities = 65/286 (22%), Positives = 122/286 (42%), Gaps = 26/286 (9%)
Query: 12 VSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTI-----ERDIMVKSK 66
++ D++++ I G + +K++ EK ++ E M +
Sbjct: 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCH 71
Query: 67 CPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLE------NQPHGYLSESKARFYIYELA 120
P IV+ + SF + ++ +M+ ++GG + +++ G L ES + E+
Sbjct: 72 HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 131
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVP----VGTPE 176
+ ++YLH G +HRD+K N+LL G +++ DFG + + G I VGTP
Sbjct: 132 EGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 191
Query: 177 YVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYET----LDMTYSSILA 232
++APEV+E GY D+WS G+ + EL TG+ P++ L +T +
Sbjct: 192 WMAPEVME------QVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPP 245
Query: 233 CDTEDTVSFPSSIRLSTAMVNFV-QSLVQKLDARLNMDQVLGHPVF 277
+ + + L + + R ++L H F
Sbjct: 246 SLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFF 291
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase,
ATP-binding, disease mutation, nucleoti binding,
phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB:
3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A*
2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A*
3orn_A* 3os3_A* 3sls_A* 1s9i_A*
Length = 360
Score = 141 bits (358), Expect = 5e-37
Identities = 63/284 (22%), Positives = 108/284 (38%), Gaps = 25/284 (8%)
Query: 12 VSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIER-----DIMVKSK 66
+ DF+ + GN G ++ V K S K + E P + ++ +
Sbjct: 30 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN 89
Query: 67 CPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYL 126
PYIV + +F + ME++ GG +L + G + E + + + YL
Sbjct: 90 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYL 147
Query: 127 HG-LGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEW 185
+HRD+KP N+L+++ G +KL DFG + Q+ + S VGT Y++PE L+
Sbjct: 148 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI-DSMANSF--VGTRSYMSPERLQ- 203
Query: 186 MEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSI 245
Y+ D+WS+G+ E+ G P D P
Sbjct: 204 ------GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRP 257
Query: 246 RLSTAMVNFVQSLVQKLDARLNMDQVLGHPVFDCLDSDPPCIPP 289
R +N + A + ++ PP +P
Sbjct: 258 RTPGRPLNKFGMDSRPPMAIFELLD-------YIVNEPPPKLPS 294
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding,
phosphorylation, allosteric enzyme, alternative
splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A
{Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A*
1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Length = 297
Score = 139 bits (352), Expect = 1e-36
Identities = 77/285 (27%), Positives = 136/285 (47%), Gaps = 26/285 (9%)
Query: 1 KDVVKELRQKNVSASD----FDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMP-- 54
++++++LR VS D + I QG G +Y + + ++++ ++ P
Sbjct: 3 EEILEKLRS-IVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK 61
Query: 55 NTIERDIMVKSKC--PYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKA 112
I +I+V + P IVN S+ + ++ +MEY+ GG ++ + E +
Sbjct: 62 ELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC---MDEGQI 118
Query: 113 RFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPV 172
E QA+++LH +HRDIK DN+LL G +KLTDFG Q+ + K V
Sbjct: 119 AAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE-QSKRSTMV 177
Query: 173 GTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTP-FNYETLDMTYSSIL 231
GTP ++APEV+ Y D+WS+G+++ E++ G P N L Y ++
Sbjct: 178 GTPYWMAPEVVT-------RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY--LI 228
Query: 232 ACDTEDTVSFPSSIRLSTAMVNFV-QSLVQKLDARLNMDQVLGHP 275
A T T + +LS +F+ + L ++ R + ++L H
Sbjct: 229 A--TNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQ 271
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition
state, activation helix, serine/threonine-PR kinase;
HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Length = 340
Score = 140 bits (354), Expect = 1e-36
Identities = 61/274 (22%), Positives = 111/274 (40%), Gaps = 19/274 (6%)
Query: 12 VSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKV---LREKMPNTIERDI---MVKS 65
V A D + + +G +G + + S +K++ + + + D+ M
Sbjct: 48 VKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTV 107
Query: 66 KCPYIVNLFYSFQDMNHVYFIMEYVTGG-DFVTLLENQPHGYLSESKARFYIYELAQAVQ 124
CP+ V + + V+ ME + D + E + +A++
Sbjct: 108 DCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALE 167
Query: 125 YLHG-LGYVHRDIKPDNMLLSATGHLKLTDFG-SATQVDKNGRIKSIVPVGTPEYVAPEV 182
+LH L +HRD+KP N+L++A G +K+ DFG S VD + G Y+APE
Sbjct: 168 HLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTID---AGCKPYMAPER 224
Query: 183 LEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFP 242
+ GY+ D+WS+G+ EL P Y++ + + E + P
Sbjct: 225 I---NPELNQKGYSVKSDIWSLGITMIELAILRFP--YDSWGTPFQQLKQVVEEPSPQLP 279
Query: 243 SSIRLSTAMVNFVQS-LVQKLDARLNMDQVLGHP 275
+ + S V+F L + R +++ HP
Sbjct: 280 AD-KFSAEFVDFTSQCLKKNSKERPTYPELMQHP 312
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A
{Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Length = 348
Score = 139 bits (353), Expect = 2e-36
Identities = 56/209 (26%), Positives = 89/209 (42%), Gaps = 18/209 (8%)
Query: 17 FDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERD-------IMVKSKCPY 69
F R I G+FG +Y + ++ +KK+ + + + K + P
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 70 IVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGL 129
+ + + + +MEY G + L L E + + Q + YLH
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGS--ASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH 173
Query: 130 GYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGN 189
+HRD+K N+LLS G +KL DFGSA+ + VGTP ++APEV+ M+
Sbjct: 174 NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSF-----VGTPYWMAPEVILAMDEG 228
Query: 190 HGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
Y G D+WS+G+ EL P
Sbjct: 229 ----QYDGKVDVWSLGITCIELAERKPPL 253
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding,
transferase, nucleotide-binding; HET: SEP; 1.6A {Homo
sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A*
2bva_A*
Length = 321
Score = 137 bits (346), Expect = 9e-36
Identities = 70/266 (26%), Positives = 123/266 (46%), Gaps = 23/266 (8%)
Query: 17 FDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTI----ERDIMVKSKCPYIVN 72
D I +G+ G + L EK S +K + K E IM + +V
Sbjct: 47 LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVE 106
Query: 73 LFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYV 132
++ S+ ++ +ME++ GG ++ L+E + + QA+ YLH G +
Sbjct: 107 MYKSYLVGEELWVLMEFLQGGALTDIVSQVR---LNEEQIATVCEAVLQALAYLHAQGVI 163
Query: 133 HRDIKPDNMLLSATGHLKLTDFGSATQVDK-NGRIKSIVPVGTPEYVAPEVLEWMEGNHG 191
HRDIK D++LL+ G +KL+DFG Q+ K + KS+ VGTP ++APEV+
Sbjct: 164 HRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSL--VGTPYWMAPEVIS------- 214
Query: 192 SDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMT-YSSILACDTEDTVSFPSSIRLSTA 250
Y D+WS+G++ E++ G P+ + ++ +S ++S
Sbjct: 215 RSLYATEVDIWSLGIMVIEMVDGEPPY----FSDSPVQAMKRLRDSPPPKLKNSHKVSPV 270
Query: 251 MVNFV-QSLVQKLDARLNMDQVLGHP 275
+ +F+ + LV+ R ++L HP
Sbjct: 271 LRDFLERMLVRDPQERATAQELLDHP 296
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase,
phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus
musculus}
Length = 332
Score = 131 bits (332), Expect = 8e-34
Identities = 43/289 (14%), Positives = 100/289 (34%), Gaps = 30/289 (10%)
Query: 3 VVKELRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIM 62
+ +L + + ++ + K + + +++ M
Sbjct: 57 ALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSP-SPMDAPSVKIRRM 115
Query: 63 VKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQ-PHGYLSESKARFYIYELAQ 121
V ++Y M+ + + + ++A+
Sbjct: 116 DPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAE 175
Query: 122 AVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVP---------- 171
AV++LH G +HRD+KP N+ + +K+ DFG T +D++ ++++
Sbjct: 176 AVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTG 235
Query: 172 -VGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSI 230
VGT Y++PE + + Y+ D++S+G++ +ELL + + +
Sbjct: 236 QVGTKLYMSPEQIH-------GNNYSHKVDIFSLGLILFELLYSFSTQM--ERVRIITDV 286
Query: 231 LACDTEDTVSFPSSI-RLSTAMVNFVQSLVQKL-DARLNMDQVLGHPVF 277
FP + VQ ++ R ++ + +F
Sbjct: 287 RNLK------FPLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIENAIF 329
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A
{Mycobacterium tuberculosis}
Length = 309
Score = 128 bits (325), Expect = 5e-33
Identities = 45/156 (28%), Positives = 71/156 (45%), Gaps = 9/156 (5%)
Query: 68 PYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLH 127
P++V + + +Y M + G D +L G L+ +A + ++ A+ H
Sbjct: 94 PHVVPIHDFGEIDGQLYVDMRLINGVDLAAMLRR--QGPLAPPRAVAIVRQIGSALDAAH 151
Query: 128 GLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWME 187
G HRD+KP+N+L+SA L DFG A+ + VGT Y+APE
Sbjct: 152 AAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSESH 211
Query: 188 GNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETL 223
+ +D Y ++ V YE LTGS P+ + L
Sbjct: 212 ATYRADIY-------ALTCVLYECLTGSPPYQGDQL 240
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus
subsp}
Length = 294
Score = 125 bits (316), Expect = 5e-32
Identities = 49/155 (31%), Positives = 81/155 (52%), Gaps = 9/155 (5%)
Query: 68 PYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLH 127
IV++ ++ + Y +MEY+ G +E+ HG LS A + ++ +++ H
Sbjct: 71 QNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIES--HGPLSVDTAINFTNQILDGIKHAH 128
Query: 128 GLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWME 187
+ VHRDIKP N+L+ + LK+ DFG A + + ++ +GT +Y +PE +
Sbjct: 129 DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEA 188
Query: 188 GNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYET 222
+ +D Y SIG+V YE+L G PFN ET
Sbjct: 189 TDECTDIY-------SIGIVLYEMLVGEPPFNGET 216
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase
activator complex; HET: ADN; 2.00A {Homo sapiens}
Length = 307
Score = 125 bits (316), Expect = 6e-32
Identities = 57/213 (26%), Positives = 99/213 (46%), Gaps = 24/213 (11%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFV-MKKVLREKMPNTIER--DIMVKSKCPYIV 71
+ +++ + +G FG + + + V +K++ E + + P IV
Sbjct: 8 KEIEVEEVVGRGAFGVVCKAKWR---AKDVAIKQIESESERKAFIVELRQLSRVNHPNIV 64
Query: 72 NLFYSFQDMNHVYFIMEYVTGGDFVTLLENQ-PHGYLSESKARFYIYELAQAVQYLHGL- 129
Y +N V +MEY GG +L P Y + + A + + +Q V YLH +
Sbjct: 65 -KLYGAC-LNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQ 122
Query: 130 --GYVHRDIKPDNMLLSATG-HLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWM 186
+HRD+KP N+LL A G LK+ DFG+A + + G+ ++APEV E
Sbjct: 123 PKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH----MTNNKGSAAWMAPEVFE-- 176
Query: 187 EGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFN 219
Y+ CD++S G++ +E++T PF+
Sbjct: 177 -----GSNYSEKCDVFSWGIILWEVITRRKPFD 204
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural
genomics, structural consortium, SGC, transferase; HET:
FEF; 2.40A {Homo sapiens}
Length = 324
Score = 125 bits (317), Expect = 7e-32
Identities = 76/338 (22%), Positives = 134/338 (39%), Gaps = 58/338 (17%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREK---MPNTIERDI--MVKSKCPYI 70
+ + +G + +Y + K + N +K++ E P T R++ + K I
Sbjct: 3 TYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANI 62
Query: 71 VNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLG 130
V L + + EY+ D L++ + ++ + ++++L + + Y H
Sbjct: 63 VTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNI-INMHNVKLFLFQLLRGLAYCHRQK 120
Query: 131 YVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVG--TPE-----YVAPEVL 183
+HRD+KP N+L++ G LKL DFG A R KSI P E Y P++L
Sbjct: 121 VLHRDLKPQNLLINERGELKLADFGLA-------RAKSI-PTKTYDNEVVTLWYRPPDIL 172
Query: 184 EWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF----NYETLDMTYSSILACDTEDT- 238
GS Y+ D+W +G + YE+ TG F E L + IL TE+T
Sbjct: 173 ------LGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIF-RILGTPTEETW 225
Query: 239 -----------VSFPSSI---------RLSTAMVNFVQSLVQKLD--ARLNMDQVLGHPV 276
++P RL + + + L+Q + R++ + + HP
Sbjct: 226 PGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQ-FEGRNRISAEDAMKHPF 284
Query: 277 FDCLDSDPPCIP-PPSQENKFHKKDKRKASPSLKAFQK 313
F L +P S + +++AS
Sbjct: 285 FLSLGERIHKLPDTTSIFALKEIQLQKEASLRSAHHHH 322
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition,
kinase-INH complex, rubredoxin fold, TPR domain,
transferase; HET: AXX; 2.40A {Mycobacterium
tuberculosis}
Length = 681
Score = 131 bits (331), Expect = 7e-32
Identities = 58/217 (26%), Positives = 99/217 (45%), Gaps = 29/217 (13%)
Query: 19 IKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKM-PNTI-----ERDIMVKSKCPYIVN 72
+K I G G IYL ++ + V+ K L ER + + P IV
Sbjct: 84 VKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQ 143
Query: 73 LF----YSFQDMNHVYFI-MEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLH 127
+F ++ + + V +I MEYV G L+ L ++A Y+ E+ A+ YLH
Sbjct: 144 IFNFVEHTDRHGDPVGYIVMEYVGGQS----LKRSKGQKLPVAEAIAYLLEILPALSYLH 199
Query: 128 GLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWME 187
+G V+ D+KP+N++L+ LKL D G+ ++++ G + GTP + APE++
Sbjct: 200 SIGLVYNDLKPENIMLTEEQ-LKLIDLGAVSRINSFGYL-----YGTPGFQAPEIVR--- 250
Query: 188 GNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLD 224
G T + D++++G L N +D
Sbjct: 251 -----TGPTVATDIYTVGRTLAALTLDLPTRNGRYVD 282
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase,
cell cycle, inhibition, cyclin-dependent kinase, cancer,
ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A*
2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A*
1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A*
1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Length = 299
Score = 123 bits (311), Expect = 3e-31
Identities = 73/314 (23%), Positives = 122/314 (38%), Gaps = 58/314 (18%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKV----LREKMPNTIERDI--MVKSKCPY 69
+F I +G +G +Y K + +KK+ E +P+T R+I + + P
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 70 IVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGL 129
IV L N +Y + E++ D ++ + + Y+++L Q + + H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 130 GYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVG--TPE-----YVAPEV 182
+HRD+KP N+L++ G +KL DFG A R + PV T E Y APE+
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLA-------RAFGV-PVRTYTHEVVTLWYRAPEI 174
Query: 183 LEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF----NYETLDMTYSSILACDTEDT 238
L G+ Y+ + D+WS+G + E++T F + L + L E
Sbjct: 175 L------LGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF-RTLGTPDEVV 227
Query: 239 -----------VSFPSSI---------RLSTAMVNFVQSLVQKLD--ARLNMDQVLGHPV 276
SFP L + + ++ D R++ L HP
Sbjct: 228 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH-YDPNKRISAKAALAHPF 286
Query: 277 FDCLDSDPPCIPPP 290
F D P
Sbjct: 287 FQ--DVTKPVPHLR 298
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat,
ATP-binding, cell junction, cell membrane,
integrin-binding protein, membrane, nucleotide- binding;
1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A*
Length = 271
Score = 122 bits (308), Expect = 4e-31
Identities = 39/235 (16%), Positives = 88/235 (37%), Gaps = 30/235 (12%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNT-IERD------ 60
+ + + + + + G+++ + + ++ KVL+ + +T RD
Sbjct: 3 KHSGIDFKQLNFLTKLNENHSGELW---KGRWQGNDIVVKVLKVRDWSTRKSRDFNEECP 59
Query: 61 IMVKSKCPYIVNLFY---SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIY 117
+ P ++ H I ++ G +L + + +S+A +
Sbjct: 60 RLRIFSHPNVL-PVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFAL 118
Query: 118 ELAQAVQYLHGLGY--VHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTP 175
++A+ + +LH L + ++++ +++ GR+ P
Sbjct: 119 DMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGRM------YAP 172
Query: 176 EYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSI 230
+VAPE L+ D S D+WS V+ +EL+T PF D++ I
Sbjct: 173 AWVAPEALQ----KKPEDTNRRSADMWSFAVLLWELVTREVPFA----DLSNMEI 219
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2,
phosphorylation, transferase; HET: STU; 2.50A
{Arabidopsis thaliana} PDB: 3ppz_A*
Length = 309
Score = 121 bits (306), Expect = 1e-30
Identities = 57/230 (24%), Positives = 104/230 (45%), Gaps = 25/230 (10%)
Query: 11 NVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTI-------ERDIMV 63
++ D +IK I G+FG ++ + H + V K+L E+ + E IM
Sbjct: 33 DIPWCDLNIKEKIGAGSFGTVH---RAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMK 89
Query: 64 KSKCPYIVNLFYSFQDMNHVYFIMEYVTGGD-FVTLLENQPHGYLSESKARFYIYELAQA 122
+ + P IV + ++ + EY++ G + L ++ L E + Y++A+
Sbjct: 90 RLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKG 149
Query: 123 VQYLHGLGY--VHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAP 180
+ YLH VHR++K N+L+ +K+ DFG + + S GTPE++AP
Sbjct: 150 MNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTF-LSSKSAAGTPEWMAP 208
Query: 181 EVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSI 230
EVL + D++S GV+ +EL T P+ ++ + +
Sbjct: 209 EVLR-------DEPSNEKSDVYSFGVILWELATLQQPWG----NLNPAQV 247
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding,
nucleotide serine/threonine-protein kinase, transferase,
signaling Pro; HET: ACP; 1.80A {Dictyostelium
discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Length = 287
Score = 120 bits (302), Expect = 3e-30
Identities = 51/240 (21%), Positives = 93/240 (38%), Gaps = 33/240 (13%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTI---------- 57
R ++ ++ + ++ I +G FG ++ + V K L
Sbjct: 12 RLPTLADNEIEYEKQIGKGGFGLVHKGRLV-KDKSVVAIKSLILGDSEGETEMIEKFQEF 70
Query: 58 --ERDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFY 115
E IM P IV Y N +ME+V GD L ++ H + S
Sbjct: 71 QREVFIMSNLNHPNIV-KLYGL-MHNPPRMVMEFVPCGDLYHRLLDKAH-PIKWSVKLRL 127
Query: 116 IYELAQAVQYLHGLGY--VHRDIKPDNMLLSATG-----HLKLTDFGSATQVDKNGRIKS 168
+ ++A ++Y+ VHRD++ N+ L + K+ DFG + +
Sbjct: 128 MLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ--QSVHSVSG 185
Query: 169 IVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF-NYETLDMTY 227
++ G +++APE + + YT D +S ++ Y +LTG PF Y + +
Sbjct: 186 LL--GNFQWMAPETI-----GAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKF 238
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET:
ATP; 3.46A {Homo sapiens}
Length = 319
Score = 120 bits (302), Expect = 5e-30
Identities = 45/232 (19%), Positives = 91/232 (39%), Gaps = 25/232 (10%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERD-------IMVKSKC 67
+I I +G FG +Y + V +++ + N + +++
Sbjct: 33 EQLEIGELIGKGRFGQVY----HGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRH 88
Query: 68 PYIVNLFY-SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYL 126
+V LF + H+ I G +++ + L +K R E+ + + YL
Sbjct: 89 ENVV-LFMGACMSPPHLAIITSLCKGRTLYSVVRD-AKIVLDVNKTRQIAQEIVKGMGYL 146
Query: 127 HGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRI----KSIVPVGTPEYVAPEV 182
H G +H+D+K N+ G + +TDFG + K + G ++APE+
Sbjct: 147 HAKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEI 205
Query: 183 LEWMEGNHGSDG--YTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILA 232
+ + + D ++ D++++G + YEL PF +I+
Sbjct: 206 IRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFK----TQPAEAIIW 253
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET:
D15; 2.40A {Homo sapiens}
Length = 311
Score = 119 bits (301), Expect = 7e-30
Identities = 72/324 (22%), Positives = 128/324 (39%), Gaps = 57/324 (17%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREK----MPNTIERDI-MVKS-KCPY 69
++ I +G++G ++ + + +KK L + + R+I M+K K P
Sbjct: 4 KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPN 63
Query: 70 IVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGL 129
+VNL F+ ++ + EY + L+ G + E + ++ QAV + H
Sbjct: 64 LVNLLEVFRRKRRLHLVFEYCDH-TVLHELDRYQRG-VPEHLVKSITWQTLQAVNFCHKH 121
Query: 130 GYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSI-VPVGTPE-----YVAPEVL 183
+HRD+KP+N+L++ +KL DFG A R+ + E Y +PE+L
Sbjct: 122 NCIHRDVKPENILITKHSVIKLCDFGFA-------RLLTGPSDYYDDEVATRWYRSPELL 174
Query: 184 EWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYET-LDMTY--SSILACDTEDT-- 238
G Y D+W+IG V ELL+G + ++ +D Y L
Sbjct: 175 ------VGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQ 228
Query: 239 ----------VSFPSSI----------RLSTAMVNFVQSLVQKLD--ARLNMDQVLGHPV 276
V P +S + ++ + +D RL +Q+L HP
Sbjct: 229 VFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLH-MDPTERLTCEQLLHHPY 287
Query: 277 FDCLD--SDPPCIPPPSQENKFHK 298
F+ + D EN + +
Sbjct: 288 FENIREIEDLAKEHDKPAENLYFQ 311
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural
genomics consortium, TBSG domain, signal transduction;
HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB:
3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A*
3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Length = 311
Score = 118 bits (299), Expect = 1e-29
Identities = 50/162 (30%), Positives = 80/162 (49%), Gaps = 17/162 (10%)
Query: 68 PYIVNLF----YSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAV 123
P IV ++ Y +MEYV G ++ G ++ +A I + QA+
Sbjct: 72 PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT--EGPMTPKRAIEVIADACQAL 129
Query: 124 QYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGR---IKSIVPVGTPEYVAP 180
+ H G +HRD+KP N+++SAT +K+ DFG A + +G + V +GT +Y++P
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAV-IGTAQYLSP 188
Query: 181 EVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYET 222
E + SD Y S+G V YE+LTG PF ++
Sbjct: 189 EQARGDSVDARSDVY-------SLGCVLYEVLTGEPPFTGDS 223
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85;
cyclin-dependent kinase, signaling protein,transfera
cycle complex; HET: MES AGS; 2.90A {Saccharomyces
cerevisiae} PDB: 2pk9_A*
Length = 317
Score = 118 bits (299), Expect = 1e-29
Identities = 79/332 (23%), Positives = 133/332 (40%), Gaps = 64/332 (19%)
Query: 13 SASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREK---MPNTIERDI--MVKSKC 67
S+S F + G + +Y K + +K+V + P+T R+I M + K
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 68 PYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPH----GYLSESKARFYIYELAQAV 123
IV L+ N + + E++ D ++++ L + +++ ++L Q +
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGL 121
Query: 124 QYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVG--TPE----- 176
+ H +HRD+KP N+L++ G LKL DFG A R I PV + E
Sbjct: 122 AFCHENKILHRDLKPQNLLINKRGQLKLGDFGLA-------RAFGI-PVNTFSSEVVTLW 173
Query: 177 YVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF----NYETLDMTYSSILA 232
Y AP+VL GS Y+ S D+WS G + E++TG F + E L + + I+
Sbjct: 174 YRAPDVL------MGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIF-DIMG 226
Query: 233 CDTEDT-----------VSFP--------------SSIRLSTAMVNFVQSLVQKLD--AR 265
E + + L +++F+ L+Q L+ R
Sbjct: 227 TPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQ-LNPDMR 285
Query: 266 LNMDQVLGHPVFDCLDSDPPCIPPPSQENKFH 297
L+ Q L HP F S + H
Sbjct: 286 LSAKQALHHPWFAEYYHHASMGGSRSHHHHHH 317
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation,
protein-protein interaction, PR kinase, cell cycle,
transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP:
d.144.1.7
Length = 346
Score = 118 bits (299), Expect = 2e-29
Identities = 78/353 (22%), Positives = 144/353 (40%), Gaps = 66/353 (18%)
Query: 13 SASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKV-------LREKMPNTIERDI--MV 63
A ++ F+ +G F +Y +K ++ +KK+ ++ + T R+I +
Sbjct: 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQ 67
Query: 64 KSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAV 123
+ P I+ L +F +++ + +++ D ++++ L+ S + Y+ Q +
Sbjct: 68 ELSHPNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKDNS-LVLTPSHIKAYMLMTLQGL 125
Query: 124 QYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVG--TPE----- 176
+YLH +HRD+KP+N+LL G LKL DFG A + P T +
Sbjct: 126 EYLHQHWILHRDLKPNNLLLDENGVLKLADFGLA-------KSFGS-PNRAYTHQVVTRW 177
Query: 177 YVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF-----NYETLDMTYSSIL 231
Y APE+L G+ Y D+W++G + ELL PF + + L + L
Sbjct: 178 YRAPELL------FGARMYGVGVDMWAVGCILAELLLR-VPFLPGDSDLDQLTRIF-ETL 229
Query: 232 ACDTEDT----------VSFPSS---------IRLSTAMVNFVQSLVQKLD--ARLNMDQ 270
TE+ V+F S +++ +Q L + AR+ Q
Sbjct: 230 GTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFL-FNPCARITATQ 288
Query: 271 VLGHPVFDCLDSDPPCIPPPS--QENKFHKKDKRKASPSLKAFQKEGRYLDSA 321
L F + P P + N + K +++P+L +K L+
Sbjct: 289 ALKMKYF---SNRPGPTPGCQLPRPNCPVETLKEQSNPALAIKRKRTEALEQG 338
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase
inhibitor complex, transferase-transferase activator
complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A*
1ung_A* 1unl_A* 1h4l_A
Length = 292
Score = 116 bits (294), Expect = 4e-29
Identities = 67/315 (21%), Positives = 127/315 (40%), Gaps = 65/315 (20%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKV----LREKMPNTIERDI--MVKSKCPY 69
++ I +G +G ++ + +++H +K+V E +P++ R+I + + K
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 70 IVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGL 129
IV L + + E+ D ++ L + ++++L + + + H
Sbjct: 63 IVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGD-LDPEIVKSFLFQLLKGLGFCHSR 120
Query: 130 GYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVG--TPE-----YVAPEV 182
+HRD+KP N+L++ G LKL +FG A R I PV + E Y P+V
Sbjct: 121 NVLHRDLKPQNLLINRNGELKLANFGLA-------RAFGI-PVRCYSAEVVTLWYRPPDV 172
Query: 183 LEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF-----NYETLDMTYSSILACDTED 237
L G+ Y+ S D+WS G + EL P + L + +L TE+
Sbjct: 173 L------FGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIF-RLLGTPTEE 225
Query: 238 T----------VSFPSSI----------RLSTAMVNFVQSLVQKLD--ARLNMDQVLGHP 275
+P +L+ + +Q+L++ + R++ ++ L HP
Sbjct: 226 QWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLK-CNPVQRISAEEALQHP 284
Query: 276 VFDCLDSDPPCIPPP 290
F PP
Sbjct: 285 YFSDF-------CPP 292
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural
genomics consortium, SGC, PR kinase,
transferase-antibiotic complex; HET: STU GOL; 1.65A
{Homo sapiens}
Length = 310
Score = 117 bits (295), Expect = 4e-29
Identities = 50/231 (21%), Positives = 94/231 (40%), Gaps = 25/231 (10%)
Query: 7 LRQKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLR--EKMPNTIER--DIM 62
+ + SD + +G FG V +++ VMK+++R E+ T + +M
Sbjct: 2 MPHRIFRPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVM 61
Query: 63 VKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQA 122
+ P ++ + FI EY+ GG ++++ S+ + ++A
Sbjct: 62 RCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSM-DSQYPWSQRVSFAKDIASG 120
Query: 123 VQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFG-------------SATQVDKNGRIKSI 169
+ YLH + +HRD+ N L+ ++ + DFG + K R K
Sbjct: 121 MAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRY 180
Query: 170 VPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNY 220
VG P ++APE++ N S Y D++S G+V E++
Sbjct: 181 TVVGNPYWMAPEMI-----NGRS--YDEKVDVFSFGIVLCEIIGRVNADPD 224
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase,
transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A*
3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A*
3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A*
2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A*
Length = 289
Score = 116 bits (293), Expect = 6e-29
Identities = 47/211 (22%), Positives = 91/211 (43%), Gaps = 16/211 (7%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERD------IMVKSKCP 68
+ + I G+FG +Y + + H +K + + ++ K++
Sbjct: 24 GQITVGQRIGSGSFGTVY---KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 80
Query: 69 YIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHG 128
I+ LF + + + ++ G L K + A+ + YLH
Sbjct: 81 NIL-LFMGYSTAPQLAIVTQWCEGSSLYHHLHA-SETKFEMKKLIDIARQTARGMDYLHA 138
Query: 129 LGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDK-NGRIKSIVPVGTPEYVAPEVLEWME 187
+HRD+K +N+ L +K+ DFG AT+ + +G + G+ ++APEV+ +
Sbjct: 139 KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 198
Query: 188 GNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
N Y+ D+++ G+V YEL+TG P+
Sbjct: 199 SNP----YSFQSDVYAFGIVLYELMTGQLPY 225
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase;
HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB:
1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A*
1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A*
3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Length = 420
Score = 119 bits (299), Expect = 8e-29
Identities = 69/215 (32%), Positives = 99/215 (46%), Gaps = 34/215 (15%)
Query: 17 FDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMVKSKCPYIVNLFYS 76
+ + I G+FG +Y + S +KKVL++K E IM K IV L Y
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYF 115
Query: 77 F------QDMNHVYFIMEYVTGGDFVTLLENQPHG--YLSESKARFYIYELAQAVQYLHG 128
F +D ++ +++YV + + L + Y+Y+L +++ Y+H
Sbjct: 116 FYSSGEKKDEVYLNLVLDYV-PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 174
Query: 129 LGYVHRDIKPDNMLLSA-TGHLKLTDFGSATQVDKNGRIKSIVPVGTP--EYV------A 179
G HRDIKP N+LL T LKL DFGSA K +V G P Y+ A
Sbjct: 175 FGICHRDIKPQNLLLDPDTAVLKLCDFGSA---------KQLVR-GEPNVSYICSRYYRA 224
Query: 180 PEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTG 214
PE++ G+ YT S D+WS G V ELL G
Sbjct: 225 PELI------FGATDYTSSIDVWSAGCVLAELLLG 253
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET:
DKI; 1.53A {Homo sapiens}
Length = 331
Score = 115 bits (291), Expect = 2e-28
Identities = 55/214 (25%), Positives = 95/214 (44%), Gaps = 27/214 (12%)
Query: 13 SASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREK----MPNTIERDI-MVKS-K 66
S ++ + +G++G + K + +KK L + R+I ++K +
Sbjct: 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLR 82
Query: 67 CPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYL 126
+VNL + Y + E+V + LE P+G L + Y++++ + +
Sbjct: 83 HENLVNLLEVCKKKKRWYLVFEFVDH-TILDDLELFPNG-LDYQVVQKYLFQIINGIGFC 140
Query: 127 HGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSI-VPVGTPE-----YVAP 180
H +HRDIKP+N+L+S +G +KL DFG A R + V E Y AP
Sbjct: 141 HSHNIIHRDIKPENILVSQSGVVKLCDFGFA-------RTLAAPGEVYDDEVATRWYRAP 193
Query: 181 EVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTG 214
E+L G Y + D+W+IG + E+ G
Sbjct: 194 ELL------VGDVKYGKAVDVWAIGCLVTEMFMG 221
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent
kinase, cell cycle control, alpha/beta, complex
(inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP:
d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B*
2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B
2w9f_B
Length = 326
Score = 115 bits (291), Expect = 2e-28
Identities = 69/339 (20%), Positives = 128/339 (37%), Gaps = 65/339 (19%)
Query: 13 SASDFDIKRFIQQGNFGDIYLVEEKQSHNTFV-MKKVL----REKMPNTIERDI-----M 62
+ ++ I +G +G ++ + ++ FV +K+V E MP + R++ +
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 63 VKSKCPYIVNLF-----YSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIY 117
+ P +V LF + + E+V D T L+ P + + ++
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMF 127
Query: 118 ELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPE- 176
+L + + +LH VHRD+KP N+L++++G +KL DFG A RI S T
Sbjct: 128 QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA-------RIYSFQMALTSVV 180
Query: 177 ----YVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF----NYETLDMTYS 228
Y APEVL S Y DLWS+G + E+ F + + L
Sbjct: 181 VTLWYRAPEVL------LQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKIL- 232
Query: 229 SILACDTEDT---------VSFPSSI---------RLSTAMVNFVQSLVQKLD--ARLNM 268
++ E+ +F S + + + + + R++
Sbjct: 233 DVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLT-FNPAKRISA 291
Query: 269 DQVLGHPVFDCLDSDPPCIPPPSQENKFHKKDKRKASPS 307
L HP F D + S ++ + + +
Sbjct: 292 YSALSHPYFQ--DLERCKENLDSH--LPPSQNTSELNTA 326
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage
kinase, MLK family, MLK1 and MLK3 subtype selective
inhibitors; HET: VIN; 2.60A {Homo sapiens}
Length = 271
Score = 113 bits (286), Expect = 3e-28
Identities = 50/242 (20%), Positives = 96/242 (39%), Gaps = 48/242 (19%)
Query: 15 SDFDIKRFIQQGNFGDIY-------------LVEEKQSHNTFVMKKVLREKMPNTIERDI 61
++ ++ I G FG +Y + + ++ V +E +
Sbjct: 7 AELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAK-------L 59
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQ 121
K P I+ L ++ +ME+ GG +L + + + ++A+
Sbjct: 60 FAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKR---IPPDILVNWAVQIAR 116
Query: 122 AVQYLHGLGY---VHRDIKPDNMLLSATGH--------LKLTDFGSATQVDKNGRIKSIV 170
+ YLH +HRD+K N+L+ LK+TDFG A + + ++ +
Sbjct: 117 GMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSA-- 174
Query: 171 PVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSI 230
G ++APEV+ + ++ D+WS GV+ +ELLTG PF + ++
Sbjct: 175 -AGAYAWMAPEVIR-------ASMFSKGSDVWSYGVLLWELLTGEVPFR----GIDGLAV 222
Query: 231 LA 232
Sbjct: 223 AY 224
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR;
3.30A {Ustilago maydis}
Length = 394
Score = 115 bits (291), Expect = 5e-28
Identities = 64/209 (30%), Positives = 100/209 (47%), Gaps = 35/209 (16%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMVKSKCPYIVNLFYSF----- 77
I G+FG ++ + +S + +KKVL++K E IM K P +V+L F
Sbjct: 48 IGNGSFGVVFQAKLVES-DEVAIKKVLQDKRFKNRELQIMRIVKHPNVVDLKAFFYSNGD 106
Query: 78 -QDMNHVYFIMEYVTGGDFVTLLENQPH--GYLSESKARFYIYELAQAVQYLHGLGYVHR 134
+D + ++EYV + + + Y+Y+L +++ Y+H +G HR
Sbjct: 107 KKDEVFLNLVLEYV-PETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHR 165
Query: 135 DIKPDNMLL-SATGHLKLTDFGSATQVDKNGRIKSIVPVGTP--EYV------APEVLEW 185
DIKP N+LL +G LKL DFGSA K ++ G P Y+ APE++
Sbjct: 166 DIKPQNLLLDPPSGVLKLIDFGSA---------KILIA-GEPNVSYICSRYYRAPELI-- 213
Query: 186 MEGNHGSDGYTGSCDLWSIGVVSYELLTG 214
G+ YT + D+WS G V EL+ G
Sbjct: 214 ----FGATNYTTNIDIWSTGCVMAELMQG 238
>3niz_A Rhodanese family protein; structural genomics, structural genomics
consortium, SGC, phosphotransferase, cyclin dependent
kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB:
2qkr_A*
Length = 311
Score = 113 bits (286), Expect = 6e-28
Identities = 80/309 (25%), Positives = 133/309 (43%), Gaps = 59/309 (19%)
Query: 13 SASDFDIKRFIQQGNFGDIYLVEEKQSHNTFV-MKKVL----REKMPNTIERDI--MVKS 65
+ + +G +G +Y ++ Q V +K++ E +P+T R+I + +
Sbjct: 19 LMEKYQKLEKVGEGTYGVVYKAKDSQ--GRIVALKRIRLDAEDEGIPSTAIREISLLKEL 76
Query: 66 KCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQY 125
P IV+L + + E++ D +L+ G L +S+ + Y+Y+L + V +
Sbjct: 77 HHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTG-LQDSQIKIYLYQLLRGVAH 134
Query: 126 LHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVG--TPE-----YV 178
H +HRD+KP N+L+++ G LKL DFG A R I PV T E Y
Sbjct: 135 CHQHRILHRDLKPQNLLINSDGALKLADFGLA-------RAFGI-PVRSYTHEVVTLWYR 186
Query: 179 APEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF----NYETLDMTYSSILACD 234
AP+VL GS Y+ S D+WSIG + E++TG F + + L + SIL
Sbjct: 187 APDVL------MGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIF-SILGTP 239
Query: 235 TEDT------------VSFP--SSIRLSTAMVNFVQS---LVQKL-----DARLNMDQVL 272
+F S+ + F Q L+ + + R++ +
Sbjct: 240 NPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAM 299
Query: 273 GHPVFDCLD 281
HP F LD
Sbjct: 300 NHPYFKDLD 308
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding;
HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A*
3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A*
Length = 351
Score = 115 bits (289), Expect = 6e-28
Identities = 74/342 (21%), Positives = 124/342 (36%), Gaps = 62/342 (18%)
Query: 13 SASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVL----REKMPNTIERDIMV--KSK 66
S ++ I QG FG+++ +++ +KKVL +E P T R+I + K
Sbjct: 15 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLK 74
Query: 67 CPYIVNLF--------YSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYE 118
+VNL + +Y + ++ D LL N + S+ + +
Sbjct: 75 HENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSN-VLVKFTLSEIKRVMQM 132
Query: 119 LAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPE-- 176
L + Y+H +HRD+K N+L++ G LKL DFG A S T
Sbjct: 133 LLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLA--KNSQPNRYTNRVV 190
Query: 177 ---YVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYET----LDMTYSS 229
Y PE+L G Y DLW G + E+ T S T L +
Sbjct: 191 TLWYRPPELL------LGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALIS-Q 243
Query: 230 ILACDTEDT------------VSFPSSIR--LSTAMVNFVQS-----LVQKL-----DAR 265
+ T + + + + + +V+ L+ KL R
Sbjct: 244 LCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQR 303
Query: 266 LNMDQVLGHPVF--DCLDSDPPCIP--PPSQENKFHKKDKRK 303
++ D L H F D + SD + + ++ +RK
Sbjct: 304 IDSDDALNHDFFWSDPMPSDLKGMLSTHLTSMFEYLAPPRRK 345
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding,
serine/threonine-protein kinase, transferase; 1.85A
{Giardia lamblia} PDB: 3gc0_A*
Length = 329
Score = 114 bits (287), Expect = 7e-28
Identities = 74/316 (23%), Positives = 125/316 (39%), Gaps = 62/316 (19%)
Query: 13 SASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKV----LREKMPNTIERDIMV--KSK 66
S + + +G +G++Y + ++ T +K++ E +P T R++ + + +
Sbjct: 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQ 91
Query: 67 CPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYL 126
I+ L + ++ I EY D ++ P +S + ++Y+L V +
Sbjct: 92 HRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPD--VSMRVIKSFLYQLINGVNFC 148
Query: 127 HGLGYVHRDIKPDNMLLSA-----TGHLKLTDFGSATQVDKNGRIKSIVPVG--TPE--- 176
H +HRD+KP N+LLS T LK+ DFG A R I P+ T E
Sbjct: 149 HSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLA-------RAFGI-PIRQFTHEIIT 200
Query: 177 --YVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF----NYETLDMTYSSI 230
Y PE+L GS Y+ S D+WSI + E+L + F + L + +
Sbjct: 201 LWYRPPEIL------LGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIF-EV 253
Query: 231 LACDTEDT-----------VSFP--SSIRLSTAMVNFVQS----LVQKL-----DARLNM 268
L + T SFP L + + L+ + R++
Sbjct: 254 LGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISA 313
Query: 269 DQVLGHPVFDCLDSDP 284
L HP F D DP
Sbjct: 314 KNALEHPYFSHNDFDP 329
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain,
alternative splicing, ATP-binding, disease MU kinase,
metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Length = 307
Score = 113 bits (285), Expect = 8e-28
Identities = 54/218 (24%), Positives = 99/218 (45%), Gaps = 18/218 (8%)
Query: 9 QKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERD-------I 61
+ AS+ + I G+FG +Y K + V K+L+ P + +
Sbjct: 30 YWEIEASEVMLSTRIGSGSFGTVY----KGKWHGDVAVKILKVVDPTPEQFQAFRNEVAV 85
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQ 121
+ K++ I+ LF + +++ + ++ G L Q + + AQ
Sbjct: 86 LRKTRHVNIL-LFMGYMTKDNLAIVTQWCEGSSLYKHLHVQ-ETKFQMFQLIDIARQTAQ 143
Query: 122 AVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSAT-QVDKNGRIKSIVPVGTPEYVAP 180
+ YLH +HRD+K +N+ L +K+ DFG AT + +G + P G+ ++AP
Sbjct: 144 GMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAP 203
Query: 181 EVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
EV+ + N ++ D++S G+V YEL+TG P+
Sbjct: 204 EVIRMQDNNP----FSFQSDVYSYGIVLYELMTGELPY 237
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase,
serine/threonine-protein kinase, ATP-binding,
phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP:
d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Length = 288
Score = 111 bits (281), Expect = 2e-27
Identities = 74/305 (24%), Positives = 124/305 (40%), Gaps = 58/305 (19%)
Query: 16 DFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVL----REKMPNTIERDIMV--KSKCPY 69
+ I +G +G +Y + TF +KK+ E +P+T R+I + + K
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 70 IVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGL 129
IV L+ + + E++ D LL+ G L A+ ++ +L + Y H
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGG-LESVTAKSFLLQLLNGIAYCHDR 119
Query: 130 GYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVG--TPE-----YVAPEV 182
+HRD+KP N+L++ G LK+ DFG A R I PV T E Y AP+V
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLA-------RAFGI-PVRKYTHEIVTLWYRAPDV 171
Query: 183 LEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF----NYETLDMTYSSILACDTEDT 238
L GS Y+ + D+WS+G + E++ G+ F + L + IL
Sbjct: 172 L------MGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIF-RILGTPNSKN 224
Query: 239 -----------VSFPS----SIR-----LSTAMVNFVQSLVQKLD--ARLNMDQVLGHPV 276
+F L + ++ + +++ LD R+ Q L H
Sbjct: 225 WPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLK-LDPNQRITAKQALEHAY 283
Query: 277 FDCLD 281
F +
Sbjct: 284 FKENN 288
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle,
phosphorylation, ATP-BIN cell division, disease
mutation, kinase; 3.00A {Homo sapiens}
Length = 308
Score = 109 bits (276), Expect = 1e-26
Identities = 56/224 (25%), Positives = 91/224 (40%), Gaps = 37/224 (16%)
Query: 13 SASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVL-------REKMPNTIERDI---- 61
+ S ++ I G +G +Y + S + +K V +P + R++
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 62 -MVKSKCPYIVNLF-----YSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFY 115
+ + P +V L V + E+V D T L+ P L +
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDL 125
Query: 116 IYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTP 175
+ + + + +LH VHRD+KP+N+L+++ G +KL DFG A RI S TP
Sbjct: 126 MRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLA-------RIYSYQMALTP 178
Query: 176 E-----YVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTG 214
Y APEVL S Y D+WS+G + E+
Sbjct: 179 VVVTLWYRAPEVL------LQST-YATPVDMWSVGCIFAEMFRR 215
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB
structural genomics consortium, TBSG fold, FHAA,
transferase; 2.26A {Mycobacterium tuberculosis} PDB:
3oun_B* 3otv_A 3ouk_A
Length = 286
Score = 105 bits (263), Expect = 4e-25
Identities = 25/179 (13%), Positives = 42/179 (23%), Gaps = 40/179 (22%)
Query: 68 PYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLH 127
P + + + E++ GG + + P S A + LA A H
Sbjct: 91 PGVARVLDVVHTRAGGLVVAEWIRGGSLQEVADTSP----SPVGAIRAMQSLAAAADAAH 146
Query: 128 GLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWME 187
G P + +S G + L +
Sbjct: 147 RAGVALSIDHPSRVRVSIDGDVVLAYPA---------------------TMPDA------ 179
Query: 188 GNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETLDMTYSSILACDTEDTVSFPSSIR 246
D+ IG Y LL P + + + P+ I
Sbjct: 180 --------NPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIE-PADID 229
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum,
ATP-binding, kinase, nucleoti binding; HET: PTR DRK;
2.65A {Cryptosporidium parvum iowa II}
Length = 383
Score = 106 bits (267), Expect = 5e-25
Identities = 91/376 (24%), Positives = 141/376 (37%), Gaps = 93/376 (24%)
Query: 12 VSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMVKSKCPYIV 71
S+ + + + + G+FG + V + +S F +KKVL++ E DIM I+
Sbjct: 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDHVNII 63
Query: 72 NLFYSF--------------------------------------QDMNHVYFIMEYVTGG 93
L F ++ IMEYV
Sbjct: 64 KLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYV-PD 122
Query: 94 DFVTLLENQPHG--YLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLL-SATGHLK 150
+L++ + + YIY+L +AV ++H LG HRDIKP N+L+ S LK
Sbjct: 123 TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLK 182
Query: 151 LTDFGSATQVDKNGRIKSIVPVGTP--EYV------APEVLEWMEGNHGSDGYTGSCDLW 202
L DFGSA K ++P P Y+ APE++ G+ YT S DLW
Sbjct: 183 LCDFGSA---------KKLIP-SEPSVAYICSRFYRAPELM------LGATEYTPSIDLW 226
Query: 203 SIGVVSYELLTGSTPF---NY-----ETLDM----TYSSILACDTEDT-VSFPS------ 243
SIG V EL+ G F + + T ++ + T V FP+
Sbjct: 227 SIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDW 286
Query: 244 SIRLSTAMVNFVQSLVQKL-----DARLNMDQVLGHPVFDCLDSDPPCIPPPSQENKFHK 298
L + L++++ D R+N + + HP FD L + + N
Sbjct: 287 RKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHLR-NSY--ESEVKNNSNFP 343
Query: 299 KDKRKASPSLKAFQKE 314
+ P L F
Sbjct: 344 HGVNQNIPQLFNFSPY 359
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC,
protein kinase, transfe; HET: LDN FLC; 1.82A {Homo
sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Length = 301
Score = 101 bits (254), Expect = 8e-24
Identities = 44/225 (19%), Positives = 80/225 (35%), Gaps = 28/225 (12%)
Query: 14 ASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVL--REKMPNTIERDI--MVKSKCPY 69
A D + + +G +G+++ V K+ R++ E ++ V +
Sbjct: 7 ARDITLLECVGKGRYGEVWRG---SWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHEN 63
Query: 70 IVNLFY-----SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQ 124
I+ F S ++ I Y G L+ L + +A +
Sbjct: 64 IL-GFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT---LDTVSCLRIVLSIASGLA 119
Query: 125 YLHGLGY--------VHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVP---VG 173
+LH + HRD+K N+L+ G + D G A ++ + VG
Sbjct: 120 HLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVG 179
Query: 174 TPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
T Y+APEVL+ D+W+ G+V +E+
Sbjct: 180 TKRYMAPEVLD-ETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSN 223
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor,
transferase-transferase inhibitor CO; HET: ANP; 1.30A
{Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A*
3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A
3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A*
3owj_A* 3owk_A* ...
Length = 330
Score = 101 bits (255), Expect = 1e-23
Identities = 51/215 (23%), Positives = 92/215 (42%), Gaps = 30/215 (13%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMV---KSKCPYIV 71
D+ + R + +G + +++ ++ V+K + K R+I + P I+
Sbjct: 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIK-REIKILENLRGGPNII 94
Query: 72 NL---FYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHG 128
L + E+V DF L + L++ RFY+YE+ +A+ Y H
Sbjct: 95 TLADIVKDPVSRTPAL-VFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHS 148
Query: 129 LGYVHRDIKPDNMLL-SATGHLKLTDFGSA----TQVDKNGRIKSIVPVGTPEYVAPEVL 183
+G +HRD+KP N+++ L+L D+G A + N R V + + PE+L
Sbjct: 149 MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR------VASRYFKGPELL 202
Query: 184 EWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
Y S D+WS+G + ++ PF
Sbjct: 203 ------VDYQMYDYSLDMWSLGCMLASMIFRKEPF 231
>3mdy_A Bone morphogenetic protein receptor type-1B; complex
(isomerase-protein kinase), receptor serine/threonin
structural genomics consortium, SGC; HET: LDN; 2.05A
{Homo sapiens}
Length = 337
Score = 102 bits (255), Expect = 1e-23
Identities = 47/229 (20%), Positives = 82/229 (35%), Gaps = 28/229 (12%)
Query: 10 KNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVL--REKMPNTIERDI--MVKS 65
+ A + + I +G +G++++ + V KV E+ E +I V
Sbjct: 32 QRTIAKQIQMVKQIGKGRYGEVWMG---KWRGEKVAVKVFFTTEEASWFRETEIYQTVLM 88
Query: 66 KCPYIVNLFY-----SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELA 120
+ I+ F +Y I +Y G L++ L Y
Sbjct: 89 RHENIL-GFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTT---LDAKSMLKLAYSSV 144
Query: 121 QAVQYLHGLGY--------VHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVP- 171
+ +LH + HRD+K N+L+ G + D G A + + I P
Sbjct: 145 SGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPN 204
Query: 172 --VGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
VGT Y+ PEVL+ N D++S G++ +E+
Sbjct: 205 TRVGTKRYMPPEVLD-ESLNRNHFQSYIMADMYSFGLILWEVARRCVSG 252
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis,
transferase; 2.00A {Leishmania major}
Length = 360
Score = 101 bits (254), Expect = 2e-23
Identities = 64/224 (28%), Positives = 99/224 (44%), Gaps = 40/224 (17%)
Query: 14 ASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMVKSKC---PYI 70
F ++R QG FG + L +EK + + +KKV+++ E IM P I
Sbjct: 22 MDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNI 81
Query: 71 VNLFYSF-----QDMNHVYF--IMEYVTGGDFVTLLENQPHG--YLSESKARFYIYELAQ 121
V L F +D +Y +MEYV N + ++++L +
Sbjct: 82 VQLQSYFYTLGERDRRDIYLNVVMEYV-PDTLHRCCRNYYRRQVAPPPILIKVFLFQLIR 140
Query: 122 AVQYLH--GLGYVHRDIKPDNMLL-SATGHLKLTDFGSATQVDKNGRIKSIVPVGTP--E 176
++ LH + HRDIKP N+L+ A G LKL DFGSA K + P P
Sbjct: 141 SIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSA---------KKLSP-SEPNVA 190
Query: 177 YV------APEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTG 214
Y+ APE++ G+ YT + D+WS+G + E++ G
Sbjct: 191 YICSRYYRAPELI------FGNQHYTTAVDIWSVGCIFAEMMLG 228
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex,
transferase,transcription; HET: BAX; 2.20A {Homo
sapiens}
Length = 405
Score = 100 bits (251), Expect = 9e-23
Identities = 66/377 (17%), Positives = 140/377 (37%), Gaps = 73/377 (19%)
Query: 4 VKELRQKNVSASDFDIKRF-IQQGNFGDIYLVEEKQSHN--TFVMKKVLREKMPNTIERD 60
VK ++ F+ + + +G +G +Y + K + + +K++ + + R+
Sbjct: 9 VKLSSERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACRE 68
Query: 61 IMV--KSKCPYIVNLF--YSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARF-- 114
I + + K P +++L + V+ + +Y D +++ ++ +
Sbjct: 69 IALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPR 127
Query: 115 -----YIYELAQAVQYLHGLGYVHRDIKPDNMLLSA----TGHLKLTDFGSATQVDKNGR 165
+Y++ + YLH +HRD+KP N+L+ G +K+ D G A + +
Sbjct: 128 GMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLK 187
Query: 166 IKSIVP--VGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYETL 223
+ + V T Y APE+L G+ YT + D+W+IG + ELLT F+
Sbjct: 188 PLADLDPVVVTFWYRAPELL------LGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 241
Query: 224 DMTYSSILACD------------TEDT--------------VSFPSSIRLSTAMVNFVQS 257
D+ S+ D + F + + +++ +++
Sbjct: 242 DIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEK 301
Query: 258 LVQKLDA----------------RLNMDQVLGHPVFDCLDSDPPCIP--PPSQENKFHKK 299
K D+ R+ +Q + P F + P Q ++
Sbjct: 302 HKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFL--EDPLPTSDVFAGCQIPYPKRE 359
Query: 300 DKRKASPSLKAFQKEGR 316
+ P K +K +
Sbjct: 360 FLTEEEPDDKGDKKNQQ 376
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3;
transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae}
PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Length = 353
Score = 99.2 bits (248), Expect = 1e-22
Identities = 61/231 (26%), Positives = 98/231 (42%), Gaps = 49/231 (21%)
Query: 17 FDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKV------------LREKM-------PNTI 57
F +K + +G +G + K + +KK+ LRE N I
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENII 72
Query: 58 E-RDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYI 116
+I SF++ N VY I E + D ++ Q LS+ +++I
Sbjct: 73 TIFNIQRPD----------SFENFNEVYIIQELM-QTDLHRVISTQM---LSDDHIQYFI 118
Query: 117 YELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTP- 175
Y+ +AV+ LHG +HRD+KP N+L+++ LK+ DFG A +D++ S
Sbjct: 119 YQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSG 178
Query: 176 --EYV------APEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
E+V APEV+ S Y+ + D+WS G + EL F
Sbjct: 179 MVEFVATRWYRAPEVM------LTSAKYSRAMDVWSCGCILAELFLRRPIF 223
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein
kinase), receptor serine/threonine kinase; 2.60A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A*
3kcf_A*
Length = 342
Score = 99.1 bits (247), Expect = 1e-22
Identities = 47/224 (20%), Positives = 83/224 (37%), Gaps = 26/224 (11%)
Query: 14 ASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVL--REKMPNTIERDI--MVKSKCPY 69
A ++ I +G FG+++ + V K+ RE+ E +I V +
Sbjct: 41 ARTIVLQESIGKGRFGEVWRG---KWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHEN 97
Query: 70 IVNLFYSFQDMN----HVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQY 125
I+ + N ++ + +Y G L ++ A + +
Sbjct: 98 ILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT---VTVEGMIKLALSTASGLAH 154
Query: 126 LHG--------LGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVP---VGT 174
LH HRD+K N+L+ G + D G A + D I P VGT
Sbjct: 155 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 214
Query: 175 PEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
Y+APEVL+ N D++++G+V +E+ +
Sbjct: 215 KRYMAPEVLD-DSINMKHFESFKRADIYAMGLVFWEIARRCSIG 257
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular
signal regulated kinase 3, serine phosphorylation,
threonine phosphorylation; 2.25A {Homo sapiens}
Length = 320
Score = 98.1 bits (245), Expect = 2e-22
Identities = 57/227 (25%), Positives = 101/227 (44%), Gaps = 33/227 (14%)
Query: 14 ASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKV-----------LREKM-------PN 55
S + + + G G ++ + +KK+ LRE N
Sbjct: 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDN 69
Query: 56 TIE-RDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARF 114
++ +I+ + + S ++N VY + EY+ D +LE P L E AR
Sbjct: 70 IVKVFEIL-GPSGSQLTDDVGSLTELNSVYIVQEYM-ETDLANVLEQGP---LLEEHARL 124
Query: 115 YIYELAQAVQYLHGLGYVHRDIKPDNMLLSATG-HLKLTDFGSATQVDKNGRIKSIVP-- 171
++Y+L + ++Y+H +HRD+KP N+ ++ LK+ DFG A +D + K +
Sbjct: 125 FMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEG 184
Query: 172 VGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
+ T Y +P +L + YT + D+W+ G + E+LTG T F
Sbjct: 185 LVTKWYRSPRLL------LSPNNYTKAIDMWAAGCIFAEMLTGKTLF 225
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase;
HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Length = 367
Score = 98.9 bits (247), Expect = 2e-22
Identities = 57/244 (23%), Positives = 104/244 (42%), Gaps = 64/244 (26%)
Query: 9 QKNVSASDFDI------KRFIQQGNFGDIYLVEEKQSHNTFVMKKV-------------L 49
++ V+ + +++ + + G +G + + ++ +KK+
Sbjct: 13 RQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAY 72
Query: 50 REKM-------PNTIE-RDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLEN 101
RE N I D+ + + D Y +M ++ G D L+++
Sbjct: 73 RELRLLKHMRHENVIGLLDVFTPDE---------TLDDFTDFYLVMPFM-GTDLGKLMKH 122
Query: 102 QPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVD 161
+ L E + +F +Y++ + ++Y+H G +HRD+KP N+ ++ LK+ DFG A Q D
Sbjct: 123 EK---LGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQAD 179
Query: 162 KNGRIKSIVPVGTPEYV------APEV-LEWMEGNHGSDGYTGSCDLWSIGVVSYELLTG 214
YV APEV L WM YT + D+WS+G + E++TG
Sbjct: 180 SE----------MTGYVVTRWYRAPEVILNWMR-------YTQTVDIWSVGCIMAEMITG 222
Query: 215 STPF 218
T F
Sbjct: 223 KTLF 226
>3qyz_A Mitogen-activated protein kinase 1; transferase,
serine/threonine-protein kinase, ATP-binding CE
phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus
norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A*
4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A
3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A*
2oji_A* ...
Length = 364
Score = 98.5 bits (246), Expect = 2e-22
Identities = 58/226 (25%), Positives = 97/226 (42%), Gaps = 42/226 (18%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKV------------LREKM-------PN 55
+ +I +G +G + + + +KK+ LRE N
Sbjct: 27 PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 86
Query: 56 TIE-RDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARF 114
I DI+ + + M VY + + + D LL+ Q LS +
Sbjct: 87 IIGINDIIRAP----------TIEQMKDVYIVQDLM-ETDLYKLLKTQH---LSNDHICY 132
Query: 115 YIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVP--V 172
++Y++ + ++Y+H +HRD+KP N+LL+ T LK+ DFG A D + + V
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 173 GTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
T Y APE++ S GYT S D+WS+G + E+L+ F
Sbjct: 193 ATRWYRAPEIM------LNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline,
aortic aneurysm, ATP-binding, craniosynostosis, disease
mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens}
PDB: 1vjy_A* 3gxl_A* 3hmm_A* 2wot_A* 2wou_A* 1py5_A*
1rw8_A*
Length = 303
Score = 97.4 bits (243), Expect = 2e-22
Identities = 47/225 (20%), Positives = 82/225 (36%), Gaps = 28/225 (12%)
Query: 14 ASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVL--REKMPNTIERDI--MVKSKCPY 69
A ++ I +G FG+++ + V K+ RE+ E +I V +
Sbjct: 2 ARTIVLQESIGKGRFGEVWRG---KWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHEN 58
Query: 70 IVNLFY-----SFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQ 124
I+ F ++ + +Y G L ++ A +
Sbjct: 59 IL-GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT---VTVEGMIKLALSTASGLA 114
Query: 125 YLHGLGY--------VHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVP---VG 173
+LH HRD+K N+L+ G + D G A + D I P VG
Sbjct: 115 HLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG 174
Query: 174 TPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
T Y+APEVL+ N D++++G+V +E+ +
Sbjct: 175 TKRYMAPEVLD-DSINMKHFESFKRADIYAMGLVFWEIARRCSIG 218
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC,
transferase, protein KI; HET: GVD; 1.95A {Homo sapiens}
PDB: 3q4t_A* 2qlu_A*
Length = 322
Score = 97.1 bits (242), Expect = 4e-22
Identities = 47/226 (20%), Positives = 84/226 (37%), Gaps = 27/226 (11%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVL--REKMPNTIERDI--MVKSKCPYI 70
+ +G FG ++ Q N +V K+ ++K E ++ + K I
Sbjct: 24 MPLQLLEVKARGRFGCVWKA---QLLNEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENI 80
Query: 71 VNLF----YSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYL 126
+ ++ I + G L+ +S ++ +A+ + YL
Sbjct: 81 LQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANV---VSWNELCHIAETMARGLAYL 137
Query: 127 HG----------LGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNG-RIKSIVPVGTP 175
H HRDIK N+LL + DFG A + + + VGT
Sbjct: 138 HEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTR 197
Query: 176 EYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPFNYE 221
Y+APEVLE + D++++G+V +EL + T +
Sbjct: 198 RYMAPEVLE--GAINFQRDAFLRIDMYAMGLVLWELASRCTAADGP 241
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP
kinase insertion, autophosphorylation, transferase; HET:
BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X*
2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A*
2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A*
3l8x_A* 3mvl_A* 3mvm_A* ...
Length = 367
Score = 97.8 bits (244), Expect = 5e-22
Identities = 54/244 (22%), Positives = 100/244 (40%), Gaps = 64/244 (26%)
Query: 9 QKNVSASDFDI------KRFIQQGNFGDIYLVEEKQSHNTFVMKKV-------------L 49
++ ++ + +++ + G +G + + ++ +KK+
Sbjct: 17 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 76
Query: 50 REKM-------PNTIE-RDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLEN 101
RE N I D+ ++ S ++ N VY + + G D +++
Sbjct: 77 RELRLLKHMKHENVIGLLDVFTPAR---------SLEEFNDVYLVTHLM-GADLNNIVKC 126
Query: 102 QPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVD 161
Q L++ +F IY++ + ++Y+H +HRD+KP N+ ++ LK+ DFG A
Sbjct: 127 QK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTA 183
Query: 162 KNGRIKSIVPVGTPEYV------APEV-LEWMEGNHGSDGYTGSCDLWSIGVVSYELLTG 214
YV APE+ L WM Y + D+WS+G + ELLTG
Sbjct: 184 DE----------MTGYVATRWYRAPEIMLNWMH-------YNQTVDIWSVGCIMAELLTG 226
Query: 215 STPF 218
T F
Sbjct: 227 RTLF 230
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural
genomics, structural genomics consortium, ATP-binding,
disease mutation; HET: ADP; 2.35A {Homo sapiens}
Length = 336
Score = 96.4 bits (240), Expect = 1e-21
Identities = 42/233 (18%), Positives = 80/233 (34%), Gaps = 31/233 (13%)
Query: 11 NVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPN--TIERDI--MVKSK 66
++ + + I +G +G +Y V KV E++I + +
Sbjct: 9 SLDLDNLKLLELIGRGRYGAVYKG---SLDERPVAVKVFSFANRQNFINEKNIYRVPLME 65
Query: 67 CPYIVNLF-----YSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQ 121
I + +MEY G L + + + +
Sbjct: 66 HDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHT---SDWVSSCRLAHSVTR 122
Query: 122 AVQYLHG---------LGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVP- 171
+ YLH HRD+ N+L+ G ++DFG + ++ N ++
Sbjct: 123 GLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEED 182
Query: 172 ------VGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
VGT Y+APEVLE + D++++G++ +E+ T
Sbjct: 183 NAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDL 235
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP
kinase, PMK, STK26, stress-activated protein kinase,
structural genomics, PSI; 2.09A {Homo sapiens}
Length = 353
Score = 93.9 bits (234), Expect = 8e-21
Identities = 57/244 (23%), Positives = 102/244 (41%), Gaps = 65/244 (26%)
Query: 9 QKNVSASDFDI------KRFIQQGNFGDIYLVEEKQSHNTFVMKKV-------------L 49
+++V+ + +++ + G +G + +K+S +KK+
Sbjct: 12 KQDVNKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAY 71
Query: 50 REKM-------PNTIE-RDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLEN 101
RE + N I D+ + S ++ Y +M ++ D ++
Sbjct: 72 RELLLLKHMQHENVIGLLDVFTPAS---------SLRNFYDFYLVMPFM-QTDLQKIMGL 121
Query: 102 QPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVD 161
+ SE K ++ +Y++ + ++Y+H G VHRD+KP N+ ++ LK+ DFG A D
Sbjct: 122 K----FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHAD 177
Query: 162 KNGRIKSIVPVGTPEYV------APEV-LEWMEGNHGSDGYTGSCDLWSIGVVSYELLTG 214
YV APEV L WM Y + D+WS+G + E+LTG
Sbjct: 178 AE----------MTGYVVTRWYRAPEVILSWMH-------YNQTVDIWSVGCIMAEMLTG 220
Query: 215 STPF 218
T F
Sbjct: 221 KTLF 224
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in
transferase-transferase inhibitor complex; HET: JBI;
2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Length = 464
Score = 95.3 bits (237), Expect = 9e-21
Identities = 47/225 (20%), Positives = 85/225 (37%), Gaps = 44/225 (19%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKV-------------LREKM-------P 54
+ + I G G + + +KK+ RE +
Sbjct: 62 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 121
Query: 55 NTIE-RDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKAR 113
N I ++ K + ++ VY +ME + L L +
Sbjct: 122 NIISLLNVFTPQK---------TLEEFQDVYLVMELMD-----ANLCQVIQMELDHERMS 167
Query: 114 FYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVG 173
+ +Y++ +++LH G +HRD+KP N+++ + LK+ DFG A + + V
Sbjct: 168 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY--VV 225
Query: 174 TPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
T Y APEV+ GY + D+WS+G + E++ F
Sbjct: 226 TRYYRAPEVI-------LGMGYKENVDIWSVGCIMGEMVRHKILF 263
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase,
phosphorylation, staurosporine, transferase; HET: STU;
2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Length = 278
Score = 91.5 bits (228), Expect = 1e-20
Identities = 47/229 (20%), Positives = 99/229 (43%), Gaps = 35/229 (15%)
Query: 12 VSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERD------IMVKS 65
++ + + + I +G FGD+ L + + V K ++ + + +M +
Sbjct: 18 LNMKELKLLQTIGKGEFGDVMLGDYR---GNKVAVKCIKN---DATAQAFLAEASVMTQL 71
Query: 66 KCPYIVNLF-YSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQ 124
+ +V L ++ +Y + EY+ G V L ++ L + ++ +A++
Sbjct: 72 RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAME 131
Query: 125 YLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQV---DKNGRIKSIVPVGTPEYVAPE 181
YL G +VHRD+ N+L+S K++DFG + G++ PV ++ APE
Sbjct: 132 YLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL----PV---KWTAPE 184
Query: 182 VLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF----NYETLDM 225
L ++ D+WS G++ +E+ + G P+ + +
Sbjct: 185 AL-----REKK--FSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPR 226
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET:
ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A*
2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A*
2jko_A* 2jkk_A*
Length = 281
Score = 91.5 bits (228), Expect = 2e-20
Identities = 58/230 (25%), Positives = 104/230 (45%), Gaps = 28/230 (12%)
Query: 12 VSASDFDIKRFIQQGNFGDIY--LVEEKQSHNTFVMKKVLREKMPNTIERD------IMV 63
+ ++ R I +G FGD++ + ++ V K + +++ M
Sbjct: 12 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMR 71
Query: 64 KSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAV 123
+ P+IV L N V+ IME T G+ + L+ + L + Y Y+L+ A+
Sbjct: 72 QFDHPHIVKL-IGVITENPVWIIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTAL 129
Query: 124 QYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNG---RIKSIVPVGTPEYVAP 180
YL +VHRDI N+L+S+ +KL DFG + ++ + K +P+ +++AP
Sbjct: 130 AYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI---KWMAP 186
Query: 181 EVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF----NYETLDM 225
E + N +T + D+W GV +E+L G PF N + +
Sbjct: 187 ESI-----NFRR--FTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR 229
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces
cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A*
1how_A 2jd5_A
Length = 373
Score = 92.8 bits (231), Expect = 2e-20
Identities = 52/226 (23%), Positives = 93/226 (41%), Gaps = 39/226 (17%)
Query: 19 IKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLR--EKMPNT--IERDI--MVKSKCP---- 68
+ R + G+F ++L ++ + NT V K++R + E + V
Sbjct: 23 LVRKLGWGHFSTVWLAKDMVN-NTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKED 81
Query: 69 -----YIVNLFYSFQ----DMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYEL 119
+I+ L F + HV + E V G + + L++ H + + +L
Sbjct: 82 SMGANHILKLLDHFNHKGPNGVHVVMVFE-VLGENLLALIKKYEHRGIPLIYVKQISKQL 140
Query: 120 AQAVQYLH-GLGYVHRDIKPDNMLLS------ATGHLKLTDFGSATQVDKNGRIKSIVPV 172
+ Y+H G +H DIKP+N+L+ +K+ D G+A D+ + +
Sbjct: 141 LLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDE--HYTNSIQ- 197
Query: 173 GTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF 218
T EY +PEVL + D+WS + +EL+TG F
Sbjct: 198 -TREYRSPEVLLGA-------PWGCGADIWSTACLIFELITGDFLF 235
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES,
fujinami, avian sarcoma, viral, feline virus, SGC; HET:
STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Length = 377
Score = 92.3 bits (230), Expect = 4e-20
Identities = 62/229 (27%), Positives = 106/229 (46%), Gaps = 27/229 (11%)
Query: 12 VSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERD------IMVKS 65
++ D + I +GNFG+++ + + NT V K RE +P ++ I+ +
Sbjct: 111 LNHEDLVLGEQIGRGNFGEVFSGRLR-ADNTLVAVKSCRETLPPDLKAKFLQEARILKQY 169
Query: 66 KCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQY 125
P IV L +Y +ME V GGDF+T L + L + + A ++Y
Sbjct: 170 SHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEG-ARLRVKTLLQMVGDAAAGMEY 228
Query: 126 LHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKS----IVPVGTPEYVAPE 181
L +HRD+ N L++ LK++DFG + + S VPV ++ APE
Sbjct: 229 LESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPV---KWTAPE 285
Query: 182 VLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF----NYETLDM 225
L N+G Y+ D+WS G++ +E + G++P+ N +T +
Sbjct: 286 AL-----NYGR--YSSESDVWSFGILLWETFSLGASPYPNLSNQQTREF 327
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase
domain, multitargeted small M kinase inhibitor; HET:
ITI; 2.70A {Homo sapiens}
Length = 327
Score = 91.5 bits (228), Expect = 4e-20
Identities = 57/241 (23%), Positives = 96/241 (39%), Gaps = 54/241 (22%)
Query: 15 SDFDIKRFIQQGNFGDIY---LVEEKQSHNTFVMKKVLREKMPNTIERD------IMVKS 65
++F + + G FG +Y + E + V K LRE ++ +M
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 66 KCPYIVNLF-YSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARF-------YIY 117
P++ L V I + + G LL+ Y+ E K +
Sbjct: 75 DNPHVCRLLGICLTS--TVQLITQLMPFGC---LLD-----YVREHKDNIGSQYLLNWCV 124
Query: 118 ELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKN--------GRIKSI 169
++A+ + YL VHRD+ N+L+ H+K+TDFG A + G++
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--- 181
Query: 170 VPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF----NYETLD 224
P+ +++A E + H YT D+WS GV +EL+T GS P+ E
Sbjct: 182 -PI---KWMALESI-----LHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS 230
Query: 225 M 225
+
Sbjct: 231 I 231
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK
Ser/Thr protein kinase fold, Ser/Thr protein kinase,
TRA; 1.95A {Leishmania major}
Length = 362
Score = 92.0 bits (229), Expect = 4e-20
Identities = 46/187 (24%), Positives = 75/187 (40%), Gaps = 40/187 (21%)
Query: 46 KKVLREKM-------PNTIE-RDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVT 97
K+VLRE PN + RDI V + M+ +Y + E + D
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFV----------HFEEPAMHKLYLVTELM-RTDLAQ 122
Query: 98 LLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSA 157
++ +Q +S ++++Y + + LH G VHRD+ P N+LL+ + + DF A
Sbjct: 123 VIHDQ-RIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLA 181
Query: 158 TQVDKNGRIKSIVPVGTPEYV------APEVLEWMEGNHGSDGYTGSCDLWSIGVVSYEL 211
+ + YV APE++ G+T D+WS G V E+
Sbjct: 182 REDTADANK--------THYVTHRWYRAPELV------MQFKGFTKLVDMWSAGCVMAEM 227
Query: 212 LTGSTPF 218
F
Sbjct: 228 FNRKALF 234
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase;
HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Length = 333
Score = 91.2 bits (227), Expect = 5e-20
Identities = 52/236 (22%), Positives = 96/236 (40%), Gaps = 30/236 (12%)
Query: 9 QKNVSASDFDIKRFIQQGNFGDIY---LVEEKQSHNTFVMKKVLREKMPNTIERD----- 60
+ S ++ I G FG++Y L V K L+ D
Sbjct: 38 TTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEA 97
Query: 61 -IMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYEL 119
IM + I+ L + I EY+ G L + G S + + +
Sbjct: 98 GIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKD-GEFSVLQLVGMLRGI 156
Query: 120 AQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNG-----RIKSIVPVGT 174
A ++YL + YVHRD+ N+L+++ K++DFG + ++ + +P+
Sbjct: 157 AAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPI-- 214
Query: 175 PEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF----NYETLDM 225
+ APE + ++ +T + D+WS G+V +E++T G P+ N+E +
Sbjct: 215 -RWTAPEAI-----SYRK--FTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKA 262
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling
pathways, linear binding motif; HET: ANP; 1.33A {Homo
sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A*
2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X*
2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A*
1pmq_A* ...
Length = 371
Score = 91.7 bits (228), Expect = 5e-20
Identities = 53/241 (21%), Positives = 91/241 (37%), Gaps = 50/241 (20%)
Query: 5 KELRQKNVSASDFDI-KRF-----IQQGNFGDIYLVEEKQSHNTFVMKKV---------- 48
+ S F + KR+ I G G + + +KK+
Sbjct: 9 NNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHA 68
Query: 49 ---LREKM-------PNTIE-RDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVT 97
RE + N I ++ K S ++ VY +ME +
Sbjct: 69 KRAYRELVLMKCVNHKNIIGLLNVFTPQK---------SLEEFQDVYIVMELMD-----A 114
Query: 98 LLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSA 157
L L + + +Y++ +++LH G +HRD+KP N+++ + LK+ DFG A
Sbjct: 115 NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 174
Query: 158 TQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTP 217
+ + V T Y APEV+ GY + D+WS+G + E++ G
Sbjct: 175 RTAGTSFMMTPY--VVTRYYRAPEVI-------LGMGYKENVDIWSVGCIMGEMIKGGVL 225
Query: 218 F 218
F
Sbjct: 226 F 226
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase,
splicing, human, 10Z-hymendialdisine, structural
genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Length = 339
Score = 90.8 bits (226), Expect = 6e-20
Identities = 57/248 (22%), Positives = 101/248 (40%), Gaps = 57/248 (22%)
Query: 17 FDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLR--EKMPNT--IERDI--MVKSKCP-- 68
++I + +G FG + + ++ V K+++ ++ E + + + P
Sbjct: 16 YEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNS 75
Query: 69 --YIVNLFYSFQDMNHVYFIME------YVTGGDFVTLLENQPHGYLSESKARFYIYELA 120
V + F+ H+ + E Y DF + EN R Y++
Sbjct: 76 TFRCVQMLEWFEHHGHICIVFELLGLSTY----DF--IKENGFLP-FRLDHIRKMAYQIC 128
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSATGH-------------------LKLTDFGSATQVD 161
++V +LH H D+KP+N+L + + +K+ DFGSAT D
Sbjct: 129 KSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDD 188
Query: 162 KNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF--- 218
++ ++V T Y APEV+ + G++ CD+WSIG + E G T F
Sbjct: 189 EH--HSTLVS--TRHYRAPEVILAL-------GWSQPCDVWSIGCILIEYYLGFTVFPTH 237
Query: 219 -NYETLDM 225
+ E L M
Sbjct: 238 DSKEHLAM 245
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor,
ATP-binding, nucleotide-binding, oncogene, TRAN; HET:
B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A*
1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A*
3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A*
3oy3_A* 2hiw_A* 2v7a_A* ...
Length = 288
Score = 89.6 bits (223), Expect = 8e-20
Identities = 49/229 (21%), Positives = 102/229 (44%), Gaps = 29/229 (12%)
Query: 12 VSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERD-------IMVK 64
+ +D +K + G +G++Y K ++ V K L+E +T+E + +M +
Sbjct: 10 MERTDITMKHKLGGGQYGEVYEGVWK-KYSLTVAVKTLKE---DTMEVEEFLKEAAVMKE 65
Query: 65 SKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQ 124
K P +V L Y I E++T G+ + L +S + +++ A++
Sbjct: 66 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAME 125
Query: 125 YLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKN---GRIKSIVPVGTPEYVAPE 181
YL ++HRD+ N L+ +K+ DFG + + + + P+ ++ APE
Sbjct: 126 YLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI---KWTAPE 182
Query: 182 VLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF----NYETLDM 225
L + ++ D+W+ GV+ +E+ T G +P+ + ++
Sbjct: 183 SL-----AYNK--FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL 224
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment
2, heavy meromyosin, essential light chain, motor
protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1
PDB: 3j04_A 3dtp_B 3dtp_A
Length = 1184
Score = 93.7 bits (233), Expect = 9e-20
Identities = 57/343 (16%), Positives = 143/343 (41%), Gaps = 28/343 (8%)
Query: 351 EDMRHWKRDRLQLLQQLAEAKASLEDLSCSRTRVLALQAQVSSLQQDLTSHTSLLSKKEE 410
E+M+ + + ++ +A+A L++L + L + + LQ+ L + T L ++ EE
Sbjct: 857 EEMQAKDEELQRTKERQQKAEAELKEL---EQKHTQLCEEKNLLQEKLQAETELYAEAEE 913
Query: 411 EIDRLRQEMVKKESDLVATSSDLVATRHELEEVRSELKEKENLEKTDDRKLEVCEVSKEL 470
RL K+ +L ++ A E EE +L+ ++ +K++ +++
Sbjct: 914 MRVRLA----AKKQELEEILHEMEARIEEEEERSQQLQAEK-------KKMQ-----QQM 957
Query: 471 EVLRGELEEQKTATKQWKKDWYQSVKERNAAVAELKQAQTENEALKEKLTSLEQELKVSE 530
L +LEE++ A ++ + + + + ++ + +N L ++ LE+ +
Sbjct: 958 LDLEEQLEEEEAARQKLQLEKVTADGKIKKMEDDILIMEDQNNKLTKERKLLEERVSDLT 1017
Query: 531 EALATAQNSLDSKLREHQALSNTIESMQKEMEQSAVRVREMSGISEKYEKDRKTLL---- 586
LA + + + + I ++ +++ +E+ I K E + L
Sbjct: 1018 TNLAEEEEKAKNLTKLKNKHESMISELEVRLKKEEKSRQELEKIKRKLEGESSDLHEQIA 1077
Query: 587 ELKSAKERLELEVRGYKLDLESTRRELETNKDQTIELRAKSKLEKAEGELTTVREENKKL 646
EL++ L+ ++ + +L++ LE Q K+ + E ++ ++E+ +
Sbjct: 1078 ELQAQIAELKAQLAKKEEELQAALARLEDETSQKNNA--LKKIRELESHISDLQEDLESE 1135
Query: 647 KQGKIRL---VYSLFKDPQPAQSKLEKAEGELTTVREENKKLK 686
K + + L ++ + +++LE T +E
Sbjct: 1136 KAARNKAEKQKRDLSEELEALKTELEDTLDTTATQQELRGSDY 1178
Score = 89.1 bits (221), Expect = 2e-18
Identities = 41/281 (14%), Positives = 102/281 (36%), Gaps = 21/281 (7%)
Query: 354 RHWKRDRLQLLQQLAEAKASLEDLSCSRTRVLALQAQVSSLQQDLTSHTSLLSKKEEEID 413
+ + ++ ++ E + + L + + +Q Q+ L++ L + K + E
Sbjct: 923 QELEEILHEMEARIEEEEERSQQLQAEKKK---MQQQMLDLEEQLEEEEAARQKLQLEKV 979
Query: 414 RLRQEMVKKESDLVATSSDLVATRHELEEVRSELKE-KENLEKTDDRKLEVCEVSKELEV 472
++ K E D++ E + + + + NL + +++ + ++ + E
Sbjct: 980 TADGKIKKMEDDILIMEDQNNKLTKERKLLEERVSDLTTNLAEEEEKAKNLTKLKNKHES 1039
Query: 473 LRGELEEQKTATKQWKKDWYQSVKERNAAVAELKQAQTENEALKEKLTSLEQELKVSEEA 532
+ ELE + ++ +++ K + E + L+ ++ L+ +L EE
Sbjct: 1040 MISELEVRLKKEEKSRQEL---EKIKRKLEGESSDLHEQIAELQAQIAELKAQLAKKEEE 1096
Query: 533 LATAQNSLDSKLREHQALSNTIESMQKEMEQSAVRVREMSGISEKYEKDRKTLLELKSAK 592
L A L+ + + I ++ + + E E ++ + + K
Sbjct: 1097 LQAALARLEDETSQKNNALKKIRELESHISD----------LQEDLESEKAARNKAEKQK 1146
Query: 593 ERLELEVRGYKLDLESTRRELETNKDQTIELRAKSKLEKAE 633
L E+ K +LE T ELR + +
Sbjct: 1147 RDLSEELEALKTELEDTLDTTA----TQQELRGSDYKDDDD 1183
Score = 66.8 bits (163), Expect = 2e-11
Identities = 53/311 (17%), Positives = 121/311 (38%), Gaps = 37/311 (11%)
Query: 492 YQSVKERNAAVAELKQAQTENEALKEKLTSLEQELKVSEEALATAQNSLDSKLREHQALS 551
+ +E A EL++ + + + +L LEQ+ L +N L KL+ L
Sbjct: 853 TRQEEEMQAKDEELQRTKERQQKAEAELKELEQKHT----QLCEEKNLLQEKLQAETELY 908
Query: 552 NTIESMQKEME-QSAVRVREMSGISEKYEKDRKTLLELKSAKERLELEVRGYKLDLESTR 610
E M+ + + + + + E++ + +L++ K++++ ++
Sbjct: 909 AEAEEMRVRLAAKKQELEEILHEMEARIEEEEERSQQLQAEKKKMQQQML---------- 958
Query: 611 RELETNKDQTIELRAKSKLEKA---------EGELTTVREENKKLKQGKIRLVYSLFKDP 661
+LE ++ R K +LEK E ++ + ++N KL + + L +
Sbjct: 959 -DLEEQLEEEEAARQKLQLEKVTADGKIKKMEDDILIMEDQNNKLTKERKLLEERVSDLT 1017
Query: 662 QPAQSKLEKAEGELTTVREENKKLKVSFFFTLESNSLFWLDPNTFLSSLEDLKSNYTERE 721
+ EKA+ LT ++ +++ + L+ S ++L+ + E
Sbjct: 1018 TNLAEEEEKAK-NLTKLKNKHESMISELEVRLKKEE----------KSRQELEKIKRKLE 1066
Query: 722 SKLRSANEIIGEYETKITALESTMTRSESYCKEMVEYLETLQKNNDILSHDNEQLRKKNN 781
+ +E I E + +I L++ + + E + + LE + +L +
Sbjct: 1067 GESSDLHEQIAELQAQIAELKAQLAKKEEELQAALARLEDETSQKNNALKKIRELESHIS 1126
Query: 782 DILSHDNEQLR 792
D L D E +
Sbjct: 1127 D-LQEDLESEK 1136
Score = 52.1 bits (125), Expect = 6e-07
Identities = 35/242 (14%), Positives = 93/242 (38%), Gaps = 23/242 (9%)
Query: 560 EMEQSAVRVREMSGISEKYEKDRKTLLELKSAKERLELE--------------VRGYKLD 605
+ + + EM E+ ++ ++ + ++ + LE + ++
Sbjct: 848 PLLKVTRQEEEMQAKDEELQRTKERQQKAEAELKELEQKHTQLCEEKNLLQEKLQAETEL 907
Query: 606 LESTRRELETNKDQTIELRAK-----SKLEKAEGELTTVREENKKLKQGKIRLVYSLFKD 660
+ EL +++E+ E ++ E KK++Q + L +
Sbjct: 908 YAEAEEMRVRLAAKKQELEEILHEMEARIEEEEERSQQLQAEKKKMQQ----QMLDLEEQ 963
Query: 661 PQPAQSKLEKAEGELTTVREENKKLKVSFFFTLESNSLFWLDPNTFLSSLEDLKSNYTER 720
+ ++ +K + E T + KK++ + N+ + + DL +N E
Sbjct: 964 LEEEEAARQKLQLEKVTADGKIKKMEDDILIMEDQNNKLTKERKLLEERVSDLTTNLAEE 1023
Query: 721 ESKLRSANEIIGEYETKITALESTMTRSESYCKEMVEYLETLQKNNDILSHDNEQLRKKN 780
E K ++ ++ ++E+ I+ LE + + E +E+ + L+ + L +L+ +
Sbjct: 1024 EEKAKNLTKLKNKHESMISELEVRLKKEEKSRQELEKIKRKLEGESSDLHEQIAELQAQI 1083
Query: 781 ND 782
+
Sbjct: 1084 AE 1085
Score = 47.1 bits (112), Expect = 2e-05
Identities = 35/212 (16%), Positives = 76/212 (35%), Gaps = 35/212 (16%)
Query: 574 ISEKYEKDRKTLLELKSAKERLELEVRGYKLDLESTRRELETNKDQTIELRAK--SKLEK 631
++ + E+ + EL+ KER + E+ +ELE Q E + KL+
Sbjct: 852 VTRQEEEMQAKDEELQRTKERQQKA--------EAELKELEQKHTQLCEEKNLLQEKLQA 903
Query: 632 AEGELTTVREENKKLKQGKIRLVYSLFKDPQPAQSKLEKAEGELTTVREENKKLKVSFFF 691
E +L K L L + ++++E+ E ++ E KK++
Sbjct: 904 ETELYAEAEEMRVRLAAKKQELEEILHE----MEARIEEEEERSQQLQAEKKKMQ----- 954
Query: 692 TLESNSLFWLDPNTFLSSLEDLKSNYTERESKLRSANEIIGEYETKITALESTMTRSESY 751
+ DL+ E E+ + + KI +E + E
Sbjct: 955 ----------------QQMLDLEEQLEEEEAARQKLQLEKVTADGKIKKMEDDILIMEDQ 998
Query: 752 CKEMVEYLETLQKNNDILSHDNEQLRKKNNDI 783
++ + + L++ L+ + + +K ++
Sbjct: 999 NNKLTKERKLLEERVSDLTTNLAEEEEKAKNL 1030
Score = 37.9 bits (88), Expect = 0.014
Identities = 22/105 (20%), Positives = 44/105 (41%), Gaps = 4/105 (3%)
Query: 350 SEDMRHWKRDRLQLLQQLAEAKASLEDLSCSRTRVLA----LQAQVSSLQQDLTSHTSLL 405
+ K + ++L A A LED + + L L++ +S LQ+DL S +
Sbjct: 1080 QAQIAELKAQLAKKEEELQAALARLEDETSQKNNALKKIRELESHISDLQEDLESEKAAR 1139
Query: 406 SKKEEEIDRLRQEMVKKESDLVATSSDLVATRHELEEVRSELKEK 450
+K E++ L +E+ +++L T + + +K
Sbjct: 1140 NKAEKQKRDLSEELEALKTELEDTLDTTATQQELRGSDYKDDDDK 1184
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP
binding, phosphorylation, intracellular,
transferase-transferase inhibitor complex; HET: IAQ;
1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A*
3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A*
3mj1_A* 3mj2_A*
Length = 267
Score = 88.4 bits (220), Expect = 1e-19
Identities = 50/236 (21%), Positives = 92/236 (38%), Gaps = 45/236 (19%)
Query: 12 VSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERD-------IMVK 64
+ S+ + I G FG ++L V K +RE + + +M+K
Sbjct: 5 IDPSELTFVQEIGSGQFGLVHLGYWLNKDK--VAIKTIRE---GAMSEEDFIEEAEVMMK 59
Query: 65 SKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYEL----- 119
P +V L+ + + + E++ G L + YL + F L
Sbjct: 60 LSHPKLVQLYGVCLEQAPICLVTEFMEHGC---LSD-----YLRTQRGLFAAETLLGMCL 111
Query: 120 --AQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKN---GRIKSIVPVGT 174
+ + YL +HRD+ N L+ +K++DFG V + + PV
Sbjct: 112 DVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-- 169
Query: 175 PEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF----NYETLDM 225
++ +PEV + Y+ D+WS GV+ +E+ + G P+ N E ++
Sbjct: 170 -KWASPEVF-----SFSR--YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED 217
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase;
1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A
3nr9_A*
Length = 355
Score = 90.1 bits (224), Expect = 2e-19
Identities = 59/248 (23%), Positives = 96/248 (38%), Gaps = 57/248 (22%)
Query: 17 FDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLR--EKMPNT--IERDI--MVKSKCP-- 68
++I + +G FG + + + V K++R K +E ++ +K K
Sbjct: 21 YEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKEN 80
Query: 69 --YIVNLFYSFQDMNHVYFIME------YVTGGDFVTLLENQPHGYLSESKARFYIYELA 120
V + F H+ E + +F L EN R Y+L
Sbjct: 81 KFLCVLMSDWFNFHGHMCIAFELLGKNTF----EF--LKENNFQP-YPLPHVRHMAYQLC 133
Query: 121 QAVQYLHGLGYVHRDIKPDNMLLSATGH-------------------LKLTDFGSATQVD 161
A+++LH H D+KP+N+L + +++ DFGSAT
Sbjct: 134 HALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDH 193
Query: 162 KNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF--- 218
++ +IV T Y PEV+ + G+ CD+WSIG + +E G T F
Sbjct: 194 EH--HTTIVA--TRHYRPPEVILEL-------GWAQPCDVWSIGCILFEYYRGFTLFQTH 242
Query: 219 -NYETLDM 225
N E L M
Sbjct: 243 ENREHLVM 250
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2;
KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase,
structural genomics consortium; HET: SEP PTR IRB; 2.28A
{Homo sapiens} PDB: 3k2l_A*
Length = 429
Score = 90.9 bits (226), Expect = 2e-19
Identities = 49/225 (21%), Positives = 97/225 (43%), Gaps = 29/225 (12%)
Query: 17 FDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLR--EKMPNT--IERDI--MVKSKCP-- 68
+++ + I +G+FG + + + + V K++R ++ E I ++ +
Sbjct: 99 YEVLKVIGKGSFGQVVKAYDHKV-HQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDN 157
Query: 69 --YIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYL 126
++++ +F NH+ E + + L++ S R + + + Q + L
Sbjct: 158 TMNVIHMLENFTFRNHICMTFELL-SMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDAL 216
Query: 127 HGLGYVHRDIKPDNMLLSATGH--LKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLE 184
H +H D+KP+N+LL G +K+ DFGS+ + R+ + + + Y APEV+
Sbjct: 217 HKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQ--RVYTYIQ--SRFYRAPEVIL 272
Query: 185 WMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF----NYETLDM 225
Y D+WS+G + ELLTG + L
Sbjct: 273 GA-------RYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLAC 310
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase,
4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3,
2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43;
1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A*
3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A*
1k2p_A
Length = 283
Score = 88.4 bits (220), Expect = 2e-19
Identities = 55/236 (23%), Positives = 99/236 (41%), Gaps = 45/236 (19%)
Query: 12 VSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERD-------IMVK 64
+ D + + G FG + K V K+++E ++ D +M+
Sbjct: 21 IDPKDLTFLKELGTGQFGVVK--YGKWRGQYDVAIKMIKE---GSMSEDEFIEEAKVMMN 75
Query: 65 SKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYEL----- 119
+V L+ ++ I EY+ G LL YL E + RF +L
Sbjct: 76 LSHEKLVQLYGVCTKQRPIFIITEYMANGC---LLN-----YLREMRHRFQTQQLLEMCK 127
Query: 120 --AQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKN---GRIKSIVPVGT 174
+A++YL ++HRD+ N L++ G +K++DFG + V + + S PV
Sbjct: 128 DVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPV-- 185
Query: 175 PEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF----NYETLDM 225
+ PEVL + ++ D+W+ GV+ +E+ + G P+ N ET +
Sbjct: 186 -RWSPPEVL-----MYSK--FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH 233
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase,
integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB:
2j0k_A*
Length = 656
Score = 92.2 bits (229), Expect = 2e-19
Identities = 59/241 (24%), Positives = 102/241 (42%), Gaps = 42/241 (17%)
Query: 8 RQKNVSASDFDIKRFIQQGNFGDIY--LVEEKQSHNTFVMKKVLREKMPNTIERD----- 60
R + ++ R I +G FGD++ + ++ V K + +++
Sbjct: 383 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEA 442
Query: 61 -IMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARF----- 114
M + P+IV L N V+ IME T G+ +L K
Sbjct: 443 LTMRQFDHPHIVKL-IGVITENPVWIIMELCTLGEL--------RSFLQVRKFSLDLASL 493
Query: 115 --YIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNG---RIKSI 169
Y Y+L+ A+ YL +VHRDI N+L+S+ +KL DFG + ++ + K
Sbjct: 494 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 553
Query: 170 VPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF----NYETLD 224
+P+ +++APE + N +T + D+W GV +E+L G PF N + +
Sbjct: 554 LPI---KWMAPESI-----NFRR--FTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG 603
Query: 225 M 225
Sbjct: 604 R 604
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A*
3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A*
3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A*
3ad6_A* 3kmm_A* 1qpd_A* ...
Length = 279
Score = 88.0 bits (219), Expect = 2e-19
Identities = 55/229 (24%), Positives = 105/229 (45%), Gaps = 31/229 (13%)
Query: 12 VSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERD-------IMVK 64
V + + G FG+++ + +T V K L++ ++ D +M +
Sbjct: 10 VPRETLKLVERLGAGQFGEVW--MGYYNGHTKVAVKSLKQ---GSMSPDAFLAEANLMKQ 64
Query: 65 SKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQ 124
+ +V L Y+ +Y I EY+ G V L+ L+ +K ++A+ +
Sbjct: 65 LQHQRLVRL-YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 123
Query: 125 YLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKN---GRIKSIVPVGTPEYVAPE 181
++ Y+HRD++ N+L+S T K+ DFG A ++ N R + P+ ++ APE
Sbjct: 124 FIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI---KWTAPE 180
Query: 182 VLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF----NYETLDM 225
+ N+G+ +T D+WS G++ E++T G P+ N E +
Sbjct: 181 AI-----NYGT--FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN 222
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase;
structural genomics consortium, SGC, transferase; 2.37A
{Cryptosporidium parvum iowa II}
Length = 388
Score = 89.7 bits (223), Expect = 3e-19
Identities = 54/243 (22%), Positives = 104/243 (42%), Gaps = 63/243 (25%)
Query: 17 FDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKV-------------LREKM--------PN 55
+++ + + +G +G ++ ++++ +KK+ RE M N
Sbjct: 11 YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHEN 70
Query: 56 TIERDIMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFY 115
+ ++N+ + + VY + +Y+ D ++ L ++
Sbjct: 71 IVN-----------LLNVLRA-DNDRDVYLVFDYM-ETDLHAVIRANI---LEPVHKQYV 114
Query: 116 IYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTP 175
+Y+L + ++YLH G +HRD+KP N+LL+A H+K+ DFG + R+ + +P+
Sbjct: 115 VYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSIN 174
Query: 176 --------------EYV------APEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGS 215
+YV APE+L GS YT D+WS+G + E+L G
Sbjct: 175 ENTENFDDDQPILTDYVATRWYRAPEIL------LGSTKYTKGIDMWSLGCILGEILCGK 228
Query: 216 TPF 218
F
Sbjct: 229 PIF 231
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase
inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB:
3sxr_A*
Length = 268
Score = 87.2 bits (217), Expect = 3e-19
Identities = 46/229 (20%), Positives = 96/229 (41%), Gaps = 31/229 (13%)
Query: 12 VSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERD-------IMVK 64
+ + + + + G FG + K V K+++E ++ D M+K
Sbjct: 5 LKREEITLLKELGSGQFGVVK--LGKWKGQYDVAVKMIKE---GSMSEDEFFQEAQTMMK 59
Query: 65 SKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQ 124
P +V + +Y + EY++ G + L + L S+ Y++ + +
Sbjct: 60 LSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHG-KGLEPSQLLEMCYDVCEGMA 118
Query: 125 YLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKN---GRIKSIVPVGTPEYVAPE 181
+L ++HRD+ N L+ +K++DFG V + + + PV ++ APE
Sbjct: 119 FLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPV---KWSAPE 175
Query: 182 VLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF----NYETLDM 225
V ++ Y+ D+W+ G++ +E+ + G P+ N E +
Sbjct: 176 VF-----HYFK--YSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLK 217
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding,
transfera phosphorylation, transmembrane,
tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Length = 325
Score = 88.1 bits (219), Expect = 5e-19
Identities = 52/232 (22%), Positives = 95/232 (40%), Gaps = 29/232 (12%)
Query: 12 VSASDFDIKRFIQQGNFGDIY--LVEEKQSHNTFVMKKVLREKMPNTIERD------IMV 63
+ AS I++ I G+ G++ + + V K L+ RD IM
Sbjct: 46 IEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMG 105
Query: 64 KSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAV 123
+ P I+ L + EY+ G T L G + + + + +
Sbjct: 106 QFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHD-GQFTIMQLVGMLRGVGAGM 164
Query: 124 QYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKN-----GRIKSIVPVGTPEYV 178
+YL LGYVHRD+ N+L+ + K++DFG + ++ + +P+ +
Sbjct: 165 RYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPI---RWT 221
Query: 179 APEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF----NYETLDM 225
APE + + ++ + D+WS GVV +E+L G P+ N + +
Sbjct: 222 APEAI-----AFRT--FSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISS 266
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural
genomics, structural genom consortium, SGC, ATP-binding,
membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A
3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Length = 281
Score = 86.9 bits (216), Expect = 5e-19
Identities = 51/230 (22%), Positives = 97/230 (42%), Gaps = 28/230 (12%)
Query: 12 VSASDFDIKRFIQQGNFGDIY--LVEEKQSHNTFVMKKVLREKMPNTIERD------IMV 63
++ D + R + +G FG++Y + + V K ++ + IM
Sbjct: 9 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 68
Query: 64 KSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAV 123
P+IV L + + IME G+ LE L Y ++ +A+
Sbjct: 69 NLDHPHIVKL-IGIIEEEPTWIIMELYPYGELGHYLERNK-NSLKVLTLVLYSLQICKAM 126
Query: 124 QYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNG---RIKSIVPVGTPEYVAP 180
YL + VHRDI N+L+++ +KL DFG + ++ + +P+ ++++P
Sbjct: 127 AYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPI---KWMSP 183
Query: 181 EVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF----NYETLDM 225
E + N +T + D+W V +E+L+ G PF N + + +
Sbjct: 184 ESI-----NFRR--FTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGV 226
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase,
phosphorylation, SH2, SH3, phosphotyrosine,
proto-oncogene, phosphotransferase; HET: PTR; 1.50A
{Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB:
1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B*
3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A*
3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Length = 452
Score = 89.8 bits (223), Expect = 5e-19
Identities = 55/223 (24%), Positives = 99/223 (44%), Gaps = 25/223 (11%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNT----IERDIMVKSKCPYI 70
++ + QG FG+++ + T V K L+ + E +M K + +
Sbjct: 184 ESLRLEVKLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKL 241
Query: 71 VNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLG 130
V L+ + +Y + EY++ G + L+ + YL + ++A + Y+ +
Sbjct: 242 VQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN 300
Query: 131 YVHRDIKPDNMLLSATGHLKLTDFGSATQVDKN---GRIKSIVPVGTPEYVAPEVLEWME 187
YVHRD++ N+L+ K+ DFG A ++ N R + P+ ++ APE
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI---KWTAPEAA---- 353
Query: 188 GNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF----NYETLDM 225
+G +T D+WS G++ EL T G P+ N E LD
Sbjct: 354 -LYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ 393
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A;
serine/threonine-protein kinase, minibrain homolog,
nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A
{Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Length = 382
Score = 89.0 bits (221), Expect = 5e-19
Identities = 55/227 (24%), Positives = 103/227 (45%), Gaps = 31/227 (13%)
Query: 17 FDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLR--EKMPNT--IERDI--MVKSKCP-- 68
++I I +G+FG + ++ +V K+++ + N IE + ++
Sbjct: 56 YEIDSLIGKGSFGQVVKAYDRVE-QEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEM 114
Query: 69 --YIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYL 126
YIV+L F NH+ + E ++ + L G +S + R + ++ A+ +L
Sbjct: 115 KYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRG-VSLNLTRKFAQQMCTALLFL 173
Query: 127 HG--LGYVHRDIKPDNMLLSATGH--LKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEV 182
L +H D+KP+N+LL +K+ DFGS+ Q+ + RI + + Y +PEV
Sbjct: 174 ATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ--RIYQYIQ--SRFYRSPEV 229
Query: 183 LEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGSTPF----NYETLDM 225
L M Y + D+WS+G + E+ TG F + ++
Sbjct: 230 LLGM-------PYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNK 269
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural
genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Length = 458
Score = 89.5 bits (222), Expect = 6e-19
Identities = 57/248 (22%), Positives = 98/248 (39%), Gaps = 48/248 (19%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLR----EKMPNTIERDIMVKSKC--P 68
++I+ I G++G + +K +KK+LR I R+I + ++
Sbjct: 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHD 112
Query: 69 YIVNLF-----YSFQDMNHVYFIMEYVTGGDFVTLLE-NQPHGYLSESKARFYIYELAQA 122
++V + + + +Y ++E DF L L+E + +Y L
Sbjct: 113 HVVKVLDIVIPKDVEKFDELYVVLEIA-DSDFKKLFRTPVY---LTELHIKTLLYNLLVG 168
Query: 123 VQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTP------- 175
V+Y+H G +HRD+KP N L++ +K+ DFG A VD S +P+
Sbjct: 169 VKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLV 228
Query: 176 -------------EYV------APEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGST 216
+V APE++ + YT + D+WSIG + ELL
Sbjct: 229 TFPHTKNLKRQLTGHVVTRWYRAPELI------LLQENYTEAIDVWSIGCIFAELLNMIK 282
Query: 217 PFNYETLD 224
D
Sbjct: 283 ENVAYHAD 290
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase,
transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7
Length = 535
Score = 89.9 bits (223), Expect = 6e-19
Identities = 55/223 (24%), Positives = 99/223 (44%), Gaps = 25/223 (11%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNT----IERDIMVKSKCPYI 70
++ + QG FG+++ + T V K L+ + E +M K + +
Sbjct: 267 ESLRLEVKLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKL 324
Query: 71 VNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLG 130
V L+ + +Y + EY++ G + L+ + YL + ++A + Y+ +
Sbjct: 325 VQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN 383
Query: 131 YVHRDIKPDNMLLSATGHLKLTDFGSATQVDKN---GRIKSIVPVGTPEYVAPEVLEWME 187
YVHRD++ N+L+ K+ DFG A ++ N R + P+ ++ APE
Sbjct: 384 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI---KWTAPEAA---- 436
Query: 188 GNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF----NYETLDM 225
+G +T D+WS G++ EL T G P+ N E LD
Sbjct: 437 -LYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ 476
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural
genomics CON SGC; 2.05A {Plasmodium berghei} PDB:
3nie_A*
Length = 432
Score = 88.7 bits (220), Expect = 1e-18
Identities = 56/250 (22%), Positives = 96/250 (38%), Gaps = 57/250 (22%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKV-------------LREKMPNTIERDI 61
++ IK I +G++G +YL +K + +KKV LRE I
Sbjct: 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREIT-------I 78
Query: 62 MVKSKCPYIVNLF-----YSFQDMNHVYFIMEYVTGGDFVTLLE-NQPHGYLSESKARFY 115
+ + K YI+ L+ + +Y ++E D L + L+E +
Sbjct: 79 LNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIA-DSDLKKLFKTPIF---LTEEHIKTI 134
Query: 116 IYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTP 175
+Y L ++H G +HRD+KP N LL+ +K+ DFG A ++ + +
Sbjct: 135 LYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEEN 194
Query: 176 ---------------EYV------APEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTG 214
+V APE++ + YT S D+WS G + ELL
Sbjct: 195 EEPGPHNKNLKKQLTSHVVTRWYRAPELI------LLQENYTKSIDIWSTGCIFAELLNM 248
Query: 215 STPFNYETLD 224
+ +
Sbjct: 249 LQSHINDPTN 258
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment,
structural genomics, mutant, structural genomics
consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB:
2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A
2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A*
2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Length = 373
Score = 87.4 bits (217), Expect = 1e-18
Identities = 49/234 (20%), Positives = 98/234 (41%), Gaps = 29/234 (12%)
Query: 10 KNVSASDFDIKRFIQQGNFGDIY--LVEEKQSHNTFVMKKVLREKMPNTIERD------I 61
K + A++ I + + G FG++ ++ V K L+ RD I
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 62 MVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQ 121
M + P I+ L V + EY+ G + L + + + +A
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIAS 158
Query: 122 AVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNG-----RIKSIVPVGTPE 176
++YL +GYVHRD+ N+L+++ K++DFG ++ + +P+
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPI---R 215
Query: 177 YVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF----NYETLDM 225
+ +PE + + +T + D+WS G+V +E+++ G P+ N + +
Sbjct: 216 WTSPEAI-----AYRK--FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA 262
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1;
transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Length = 495
Score = 88.7 bits (220), Expect = 1e-18
Identities = 48/226 (21%), Positives = 101/226 (44%), Gaps = 29/226 (12%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERD-------IMVKSKC 67
+D +K + G +G++Y K ++ V K L+E +T+E + +M + K
Sbjct: 220 TDITMKHKLGGGQYGEVYEGVWK-KYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKH 275
Query: 68 PYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLH 127
P +V L Y I E++T G+ + L +S + +++ A++YL
Sbjct: 276 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 335
Query: 128 GLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKN---GRIKSIVPVGTPEYVAPEVLE 184
++HR++ N L+ +K+ DFG + + + + P+ ++ APE L
Sbjct: 336 KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI---KWTAPESL- 391
Query: 185 WMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF----NYETLDM 225
+ ++ D+W+ GV+ +E+ T G +P+ + ++
Sbjct: 392 ----AYNK--FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL 431
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase,
ATP binding, phosphoryla transferase; HET: ATP; 1.75A
{Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Length = 289
Score = 85.8 bits (213), Expect = 2e-18
Identities = 49/245 (20%), Positives = 84/245 (34%), Gaps = 50/245 (20%)
Query: 12 VSASDFDIKRFIQQGNFGDIY------LVEEKQSHNTFVMKKVLREKMPNTI-----ERD 60
+ D + QG F I+ + + Q H T V+ KVL + N
Sbjct: 5 IRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAAS 64
Query: 61 IMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYEL- 119
+M K ++V + + + E+V G L YL ++K I
Sbjct: 65 MMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGS---LDT-----YLKKNKNCINILWKL 116
Query: 120 ------AQAVQYLHGLGYVHRDIKPDNMLLSATGHL--------KLTDFGSATQVDKNGR 165
A A+ +L +H ++ N+LL KL+D G + V
Sbjct: 117 EVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDI 176
Query: 166 IKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF----NY 220
++ + +V PE +E N + + D WS G +E+ + G P +
Sbjct: 177 LQ--ERI---PWVPPECIE----NPKN--LNLATDKWSFGTTLWEICSGGDKPLSALDSQ 225
Query: 221 ETLDM 225
L
Sbjct: 226 RKLQF 230
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP
binding, transferase-transfera inhibitor complex; HET:
046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A*
3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A*
3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A*
Length = 295
Score = 85.4 bits (212), Expect = 2e-18
Identities = 49/221 (22%), Positives = 86/221 (38%), Gaps = 40/221 (18%)
Query: 15 SDFDIKRFIQQGNFGDIYL---VEEKQSHNTFVMKKVLREKMPNTI-----ERDIMVKSK 66
+ + +GNFG + + + + V K L+ + E +I+ +
Sbjct: 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ 69
Query: 67 CPYIVNLF--YSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYEL----- 119
IV ++ IMEY+ G L + YL + K R +L
Sbjct: 70 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGS---LRD-----YLQKHKERIDHIKLLQYTS 121
Query: 120 --AQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNG-----RIKSIVPV 172
+ ++YL Y+HRD+ N+L+ +K+ DFG + ++ + P+
Sbjct: 122 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPI 181
Query: 173 GTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT 213
+ APE L ++ + D+WS GVV YEL T
Sbjct: 182 ---FWYAPESL-----TESK--FSVASDVWSFGVVLYELFT 212
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding,
tyrosine-protein kinase, proto-oncogene, phosphoprotein,
disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo
sapiens}
Length = 326
Score = 85.9 bits (213), Expect = 3e-18
Identities = 49/221 (22%), Positives = 87/221 (39%), Gaps = 40/221 (18%)
Query: 15 SDFDIKRFIQQGNFGDIYL---VEEKQSHNTFVMKKVLREKMPNTI-----ERDIMVKSK 66
+ + +GNFG + + + + V K L+ + E +I+ +
Sbjct: 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ 100
Query: 67 CPYIVNLF--YSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARF-------YIY 117
IV ++ IMEY+ G L + YL + K R Y
Sbjct: 101 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGS---LRD-----YLQKHKERIDHIKLLQYTS 152
Query: 118 ELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNG-----RIKSIVPV 172
++ + ++YL Y+HRD+ N+L+ +K+ DFG + ++ + P+
Sbjct: 153 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPI 212
Query: 173 GTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT 213
+ APE L ++ + D+WS GVV YEL T
Sbjct: 213 ---FWYAPESL-----TESK--FSVASDVWSFGVVLYELFT 243
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase,
quinoxaline, alternative splicing, ATP-binding,
chromosomal rearrangement; HET: IHX; 1.40A {Homo
sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A*
2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A*
2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A*
3ctj_A* ...
Length = 298
Score = 85.4 bits (212), Expect = 3e-18
Identities = 47/253 (18%), Positives = 90/253 (35%), Gaps = 52/253 (20%)
Query: 1 KDVVKELRQKNVSASDFDIKRFIQQGNFGDIY--LVEEKQSHNTFVMKKVLREKMPNTIE 58
+ VV V I +G+FG +Y + + K L
Sbjct: 16 QHVVIGPSSLIVH-----FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV 70
Query: 59 RD------IMVKSKCPYIVNLF-YSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESK 111
IM P +++L + ++ Y+ GD ++
Sbjct: 71 SQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL--------RNFIRNET 122
Query: 112 ARF-------YIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKN- 163
+ ++A+ ++YL +VHRD+ N +L +K+ DFG A +
Sbjct: 123 HNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 182
Query: 164 -----GRIKSIVPVGTPEYVAPEVLEWMEGNHGSDG-YTGSCDLWSIGVVSYELLT-GST 216
+ + +PV +++A E L+ +T D+WS GV+ +EL+T G+
Sbjct: 183 YYSVHNKTGAKLPV---KWMALESLQ--------TQKFTTKSDVWSFGVLLWELMTRGAP 231
Query: 217 PF----NYETLDM 225
P+ ++
Sbjct: 232 PYPDVNTFDITVY 244
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex,
DOWN-regulated kinase, ordered activation loop; HET: PTR
PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1
d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A*
3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Length = 454
Score = 87.5 bits (217), Expect = 3e-18
Identities = 50/226 (22%), Positives = 105/226 (46%), Gaps = 25/226 (11%)
Query: 12 VSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTI----ERDIMVKSKC 67
+ +++ + G FG++++ + +T V K ++ + E ++M +
Sbjct: 185 IPRESLKLEKKLGAGQFGEVWMATYNK--HTKVAVKTMKPGSMSVEAFLAEANVMKTLQH 242
Query: 68 PYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLH 127
+V L ++ +Y I E++ G + L++ K + ++A+ + ++
Sbjct: 243 DKLVKL-HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE 301
Query: 128 GLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKN---GRIKSIVPVGTPEYVAPEVLE 184
Y+HRD++ N+L+SA+ K+ DFG A ++ N R + P+ ++ APE +
Sbjct: 302 QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPI---KWTAPEAI- 357
Query: 185 WMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF----NYETLDM 225
N GS +T D+WS G++ E++T G P+ N E +
Sbjct: 358 ----NFGS--FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRA 397
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN
inhibitor, ATP-binding mutation, membrane,
nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A
{Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A*
Length = 327
Score = 85.5 bits (212), Expect = 3e-18
Identities = 53/234 (22%), Positives = 84/234 (35%), Gaps = 55/234 (23%)
Query: 15 SDFDIKRFIQQGNFGDIYL---VEEKQSHNTFVMKKVLREKMPNTI-----ERDIMVKSK 66
+ +GNFG + L + V K L+ P+ E I+
Sbjct: 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALH 82
Query: 67 CPYIVNLF--YSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYEL----- 119
+IV + +MEY+ G L + +L +AR L
Sbjct: 83 SDFIVKYRGVSYGPGRQSLRLVMEYLPSGC---LRD-----FLQRHRARLDASRLLLYSS 134
Query: 120 --AQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEY 177
+ ++YL VHRD+ N+L+ + H+K+ DFG A + ++P+ Y
Sbjct: 135 QICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLA-------K---LLPLDKDYY 184
Query: 178 V------------APEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF 218
V APE L + ++ D+WS GVV YEL T
Sbjct: 185 VVREPGQSPIFWYAPESL-----SDNI--FSRQSDVWSFGVVLYELFTYCDKSC 231
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK,
signal transduction, SH2, SH3, SRC homology, tyrosine
kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1
d.93.1.1 d.144.1.7 PDB: 1jeg_A
Length = 450
Score = 87.0 bits (216), Expect = 4e-18
Identities = 47/226 (20%), Positives = 97/226 (42%), Gaps = 35/226 (15%)
Query: 15 SDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERD------IMVKSKCP 68
+ + + I +G FGD+ L + + V K ++ + + +M + +
Sbjct: 193 KELKLLQTIGKGEFGDVMLGDYR---GNKVAVKCIKN---DATAQAFLAEASVMTQLRHS 246
Query: 69 YIVNLF-YSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLH 127
+V L ++ +Y + EY+ G V L ++ L + ++ +A++YL
Sbjct: 247 NLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 306
Query: 128 GLGYVHRDIKPDNMLLSATGHLKLTDFGSA---TQVDKNGRIKSIVPVGTPEYVAPEVLE 184
G +VHRD+ N+L+S K++DFG + G++ PV ++ APE L
Sbjct: 307 GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL----PV---KWTAPEAL- 358
Query: 185 WMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF----NYETLDM 225
++ D+WS G++ +E+ + G P+ + +
Sbjct: 359 ----REKK--FSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPR 398
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene,
ATP-binding, cell cycle, disea mutation, glycoprotein,
membrane, nucleotide-binding; HET: 03P; 1.50A {Homo
sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A*
1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A*
2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A*
2jiu_A* ...
Length = 327
Score = 85.1 bits (211), Expect = 5e-18
Identities = 57/241 (23%), Positives = 96/241 (39%), Gaps = 54/241 (22%)
Query: 15 SDFDIKRFIQQGNFGDIY---LVEEKQSHNTFVMKKVLREKMPNTIERD------IMVKS 65
++F + + G FG +Y + E + V K LRE ++ +M
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 66 KCPYIVNLF-YSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARF-------YIY 117
P++ L V I + + G LL+ Y+ E K +
Sbjct: 75 DNPHVCRLLGICLTS--TVQLITQLMPFGC---LLD-----YVREHKDNIGSQYLLNWCV 124
Query: 118 ELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKN--------GRIKSI 169
++A+ + YL VHRD+ N+L+ H+K+TDFG A + G++
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--- 181
Query: 170 VPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF----NYETLD 224
P+ +++A E + H YT D+WS GV +EL+T GS P+ E
Sbjct: 182 -PI---KWMALESI-----LHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS 230
Query: 225 M 225
+
Sbjct: 231 I 231
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain,
transferase-transferase inhibit complex; HET: PTR 0NT;
1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A*
3eyh_A*
Length = 302
Score = 83.9 bits (208), Expect = 9e-18
Identities = 50/222 (22%), Positives = 84/222 (37%), Gaps = 41/222 (18%)
Query: 15 SDFDIKRFIQQGNFGDIY---LVEEKQSHNTFVMKKVLREKMPNTIERD------IMVKS 65
R + +G+FG + E + V K L+ + D I+
Sbjct: 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNL 80
Query: 66 KCPYIVNLF--YSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYEL---- 119
IV + N + IME++ G L E YL ++K + + +
Sbjct: 81 YHENIVKYKGICTEDGGNGIKLIMEFLPSGS---LKE-----YLPKNKNKINLKQQLKYA 132
Query: 120 ---AQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNG-----RIKSIVP 171
+ + YL YVHRD+ N+L+ + +K+ DFG ++ + + P
Sbjct: 133 VQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSP 192
Query: 172 VGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT 213
V + APE L + + D+WS GV +ELLT
Sbjct: 193 V---FWYAPECL-----MQSK--FYIASDVWSFGVTLHELLT 224
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A
{Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A*
2csn_A*
Length = 298
Score = 83.6 bits (207), Expect = 9e-18
Identities = 51/226 (22%), Positives = 85/226 (37%), Gaps = 29/226 (12%)
Query: 9 QKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMVKSK-- 66
Q NV + + R I +G+FG I+ ++ +K R + +
Sbjct: 4 QNNVVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLA 63
Query: 67 -CPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQY 125
C I N++Y Q+ H +++ G LL+ + ++ A ++ VQ
Sbjct: 64 GCTGIPNVYYFGQEGLHNVLVIDL-LGPSLEDLLDLCGRKFSVKTVAMA-AKQMLARVQS 121
Query: 126 LHGLGYVHRDIKPDNMLLSATGHLK-----LTDFGSATQVDKNGRIKSIVP-------VG 173
+H V+RDIKPDN L+ + DFG ++ K +P G
Sbjct: 122 IHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFY-RDPVTKQHIPYREKKNLSG 180
Query: 174 TPEYVAPEVLEWMEGNHGSDGYTGSC--DLWSIGVVSYELLTGSTP 217
T Y++ + G S DL ++G V L GS P
Sbjct: 181 TARYMSI---------NTHLGREQSRRDDLEALGHVFMYFLRGSLP 217
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria,
structural GE structural genomics consortium, SGC,
transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Length = 360
Score = 83.9 bits (208), Expect = 2e-17
Identities = 66/253 (26%), Positives = 99/253 (39%), Gaps = 63/253 (24%)
Query: 17 FDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLR--EKMPNT--IERDI--MVKSKCP-- 68
F + R + G FG + L + + + KV+R +K + IE DI +++
Sbjct: 37 FLVIRKMGDGTFGRVLLCQHIDN-KKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINN 95
Query: 69 -YIVNLFYSFQDMNHVYFIME------YVTGGDFVTLLENQPHGYLSESKARFYIYELAQ 121
IV F +H+ I E Y + + N +G + Y E+ +
Sbjct: 96 NNIVKYHGKFMYYDHMCLIFEPLGPSLY----EI--ITRNNYNG-FHIEDIKLYCIEILK 148
Query: 122 AVQYLHGLGYVHRDIKPDNMLLSATGH-------------------------LKLTDFGS 156
A+ YL + H D+KP+N+LL +KL DFG
Sbjct: 149 ALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGC 208
Query: 157 ATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTGST 216
AT SI+ T +Y APEV+ + G+ S D+WS G V EL TGS
Sbjct: 209 ATFKSDY--HGSII--NTRQYRAPEVILNL-------GWDVSSDMWSFGCVLAELYTGSL 257
Query: 217 PF----NYETLDM 225
F + E L M
Sbjct: 258 LFRTHEHMEHLAM 270
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding,
glycoprotein, membrane, nucleotide-binding,
phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Length = 367
Score = 83.6 bits (207), Expect = 3e-17
Identities = 61/243 (25%), Positives = 98/243 (40%), Gaps = 41/243 (16%)
Query: 12 VSASDFDIKRFIQQGNFGDIYLVE----EKQSHNTFVMKKVLREKMPNTIERD------I 61
V + + R + G FG++Y + V K L E E D I
Sbjct: 68 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI 127
Query: 62 MVKSKCPYIVNLF-YSFQDMNHVYFIMEYVTGGDFVT-LLENQPH----GYLSESKARFY 115
+ K IV S Q + + ++E + GGD + L E +P L+
Sbjct: 128 ISKFNHQNIVRCIGVSLQSL-PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 186
Query: 116 IYELAQAVQYLHGLGYVHRDIKPDNMLLSATGH---LKLTDFGSATQVDKNG----RIKS 168
++A QYL ++HRDI N LL+ G K+ DFG A + + G +
Sbjct: 187 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCA 246
Query: 169 IVPVGTPEYVAPEVLEWMEGNHGSDG-YTGSCDLWSIGVVSYELLT-GSTPF----NYET 222
++PV +++ PE +G +T D WS GV+ +E+ + G P+ N E
Sbjct: 247 MLPV---KWMPPEAF--------MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV 295
Query: 223 LDM 225
L+
Sbjct: 296 LEF 298
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor,
receptor tyrosine kinase, spirocyc kinase domain,
phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus
musculus}
Length = 323
Score = 82.8 bits (205), Expect = 3e-17
Identities = 49/253 (19%), Positives = 105/253 (41%), Gaps = 40/253 (15%)
Query: 2 DVVKELRQKNVSASDFDIKRFIQQGNFGDIY--LVEEKQSHNTFVMKKVLREKMPNTIER 59
++ ++L + F + R + +G FG + ++++ V K+L+ + + +
Sbjct: 10 ELKEKLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDI 69
Query: 60 D-------IMVKSKCPYIVNLF------YSFQDMNHVYFIMEYVTGGDFVT-LLENQPHG 105
+ M + P++ L + + I+ ++ GD LL ++
Sbjct: 70 EEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGE 129
Query: 106 ---YLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDK 162
L ++ ++A ++YL ++HRD+ N +L+ + + DFG + ++
Sbjct: 130 NPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYS 189
Query: 163 N----GRIKSIVPVGTPEYVAPEVLEWMEGNHGSDG-YTGSCDLWSIGVVSYELLT-GST 216
S +PV +++A E L D YT D+W+ GV +E++T G T
Sbjct: 190 GDYYRQGCASKLPV---KWLALESLA--------DNLYTVHSDVWAFGVTMWEIMTRGQT 238
Query: 217 PF----NYETLDM 225
P+ N E +
Sbjct: 239 PYAGIENAEIYNY 251
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal
transduction, GRB2, SHC, ATP-binding, glycoprotein,
membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Length = 373
Score = 83.3 bits (206), Expect = 3e-17
Identities = 45/257 (17%), Positives = 88/257 (34%), Gaps = 60/257 (23%)
Query: 1 KDVVKELRQKNVSASDFDIKRFIQQGNFGDIY--LVEEKQSHNTFVMKKVLREKMPNTIE 58
+ VV V I +G+FG +Y + + K L
Sbjct: 80 QHVVIGPSSLIVH-----FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV 134
Query: 59 RD------IMVKSKCPYIVNLF-YSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESK 111
IM P +++L + ++ Y+ GD ++
Sbjct: 135 SQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL--------RNFIRNET 186
Query: 112 ARF-------YIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFG--------- 155
+ ++A+ +++L +VHRD+ N +L +K+ DFG
Sbjct: 187 HNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 246
Query: 156 -SATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDG-YTGSCDLWSIGVVSYELLT 213
+ ++ PV +++A E L+ +T D+WS GV+ +EL+T
Sbjct: 247 FDSVHNKTGAKL----PV---KWMALESLQ--------TQKFTTKSDVWSFGVLLWELMT 291
Query: 214 -GSTPF----NYETLDM 225
G+ P+ ++
Sbjct: 292 RGAPPYPDVNTFDITVY 308
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation,
cancer, PAN inhibitor, ATP-binding nucleotide-binding,
phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo
sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A*
Length = 318
Score = 82.0 bits (203), Expect = 4e-17
Identities = 49/215 (22%), Positives = 77/215 (35%), Gaps = 29/215 (13%)
Query: 15 SDFDIKRFIQQGNFGDIYL---VEEKQSHNTFVMKKVLREKMPNTIERD------IMVKS 65
R + +G+FG + L V K L+ I+
Sbjct: 31 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTL 90
Query: 66 KCPYIVNLF--YSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAV 123
+I+ + +MEYV G L + ++ + ++ + +
Sbjct: 91 YHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS---IGLAQLLLFAQQICEGM 147
Query: 124 QYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNG-----RIKSIVPVGTPEYV 178
YLH Y+HRD+ N+LL +K+ DFG A V + R PV +
Sbjct: 148 AYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPV---FWY 204
Query: 179 APEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT 213
APE L + + D+WS GV YELLT
Sbjct: 205 APECL-----KEYK--FYYASDVWSFGVTLYELLT 232
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease
mutation, glycoprotein, nucleot binding,
phosphorylation, receptor; HET: ADP; 1.90A {Homo
sapiens} PDB: 3bpr_A* 2p0c_A*
Length = 313
Score = 81.6 bits (202), Expect = 6e-17
Identities = 49/253 (19%), Positives = 105/253 (41%), Gaps = 39/253 (15%)
Query: 1 KDVVKELRQKNVSASDFDIKRFIQQGNFGDIY--LVEEKQSHNTFVMKKVLREKMPNTIE 58
+++ +L + + + + + +G FG + ++++ + V K ++ + E
Sbjct: 20 EELQNKLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQRE 79
Query: 59 RD-------IMVKSKCPYIVNLF-----YSFQDMNHVYFIMEYVTGGDFVT-LLENQPHG 105
+ M P ++ L S Q + I+ ++ GD T LL ++
Sbjct: 80 IEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLET 139
Query: 106 ---YLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDK 162
++ ++ ++A ++YL ++HRD+ N +L + + DFG + ++
Sbjct: 140 GPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYS 199
Query: 163 N----GRIKSIVPVGTPEYVAPEVLEWMEGNHGSDG-YTGSCDLWSIGVVSYELLT-GST 216
+ +PV +++A E L D YT D+W+ GV +E+ T G T
Sbjct: 200 GDYYRQGRIAKMPV---KWIAIESLA--------DRVYTSKSDVWAFGVTMWEIATRGMT 248
Query: 217 PF----NYETLDM 225
P+ N+E D
Sbjct: 249 PYPGVQNHEMYDY 261
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS
autophosphorylation conformation, recept tyrosine
kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo
sapiens}
Length = 298
Score = 81.2 bits (201), Expect = 7e-17
Identities = 46/228 (20%), Positives = 89/228 (39%), Gaps = 33/228 (14%)
Query: 19 IKRFIQQGNFGDIY--LVEEKQSHNTFVMKKVLREKMPNTIERD------IMVKSKCPYI 70
R I +G+FG +Y ++ + K L +M P +
Sbjct: 25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNV 84
Query: 71 VNLF-YSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGL 129
+ L + ++ Y+ GD + + + P + + ++A+ ++YL
Sbjct: 85 LALIGIMLPPEGLPHVLLPYMCHGDLLQFIRS-PQRNPTVKDLISFGLQVARGMEYLAEQ 143
Query: 130 GYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKN------GRIKSIVPVGTPEYVAPEVL 183
+VHRD+ N +L + +K+ DFG A + + +PV ++ A E L
Sbjct: 144 KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPV---KWTALESL 200
Query: 184 EWMEGNHGSDG-YTGSCDLWSIGVVSYELLT-GSTPF----NYETLDM 225
+ +T D+WS GV+ +ELLT G+ P+ ++
Sbjct: 201 Q--------TYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHF 240
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase;
HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A*
2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Length = 327
Score = 81.6 bits (202), Expect = 7e-17
Identities = 61/243 (25%), Positives = 97/243 (39%), Gaps = 41/243 (16%)
Query: 12 VSASDFDIKRFIQQGNFGDIYLVE----EKQSHNTFVMKKVLREKMPNTIERD------I 61
V + + R + G FG++Y + V K L E E D I
Sbjct: 27 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI 86
Query: 62 MVKSKCPYIVNLF-YSFQDMNHVYFIMEYVTGGDFVT-LLENQPHG----YLSESKARFY 115
+ K IV S Q + + +ME + GGD + L E +P L+
Sbjct: 87 ISKFNHQNIVRCIGVSLQSL-PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 145
Query: 116 IYELAQAVQYLHGLGYVHRDIKPDNMLLSATGH---LKLTDFGSATQVDKNG----RIKS 168
++A QYL ++HRDI N LL+ G K+ DFG A + + +
Sbjct: 146 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA 205
Query: 169 IVPVGTPEYVAPEVLEWMEGNHGSDG-YTGSCDLWSIGVVSYELLT-GSTPF----NYET 222
++PV +++ PE +G +T D WS GV+ +E+ + G P+ N E
Sbjct: 206 MLPV---KWMPPEAF--------MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV 254
Query: 223 LDM 225
L+
Sbjct: 255 LEF 257
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive
kinase, HER3, ATP-binding, cell membrane, membrane,
nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB:
3lmg_A*
Length = 325
Score = 80.8 bits (200), Expect = 1e-16
Identities = 49/243 (20%), Positives = 96/243 (39%), Gaps = 52/243 (21%)
Query: 12 VSASDFDIKRFIQQGNFGDIY---LVEEKQSHNTFVMKKVLREKMPNTIERD------IM 62
++ + + G FG ++ + E +S V KV+ +K + +
Sbjct: 10 FKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAI 69
Query: 63 VKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYEL--- 119
+IV L + + + +Y+ G LL+ ++ + + L
Sbjct: 70 GSLDHAHIVRL-LGLCPGSSLQLVTQYLPLGS---LLD-----HVRQHRGALGPQLLLNW 120
Query: 120 ----AQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKN--------GRIK 167
A+ + YL G VHR++ N+LL + +++ DFG A + + +
Sbjct: 121 GVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKT- 179
Query: 168 SIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF----NYET 222
P+ +++A E + + G YT D+WS GV +EL+T G+ P+ E
Sbjct: 180 ---PI---KWMALESI-----HFGK--YTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEV 226
Query: 223 LDM 225
D+
Sbjct: 227 PDL 229
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen
typrosine kinase, active conformation, structural
genomics, structural genomix; HET: STI; 1.57A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A*
3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A*
3vf9_A*
Length = 291
Score = 80.0 bits (198), Expect = 2e-16
Identities = 50/243 (20%), Positives = 103/243 (42%), Gaps = 34/243 (13%)
Query: 4 VKELRQKN--VSASDFDIK-RFIQQGNFGDIYL-VEEKQSHNTFVMKKVLREKMPNTIER 59
++E+R K + ++ + + GNFG + + + V K+L+ + + +
Sbjct: 3 LEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK 62
Query: 60 D-------IMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKA 112
D +M + PYIV + + +ME G L Q + ++ +
Sbjct: 63 DELLAEANVMQQLDNPYIVRM-IGICEAESWMLVMEMAELGPLNKYL--QQNRHVKDKNI 119
Query: 113 RFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNG-----RIK 167
+++++ ++YL +VHRD+ N+LL + K++DFG + + + +
Sbjct: 120 IELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 179
Query: 168 SIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF----NYET 222
PV ++ APE + N+ ++ D+WS GV+ +E + G P+ E
Sbjct: 180 GKWPV---KWYAPECI-----NYYK--FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 229
Query: 223 LDM 225
M
Sbjct: 230 TAM 232
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase
domain, hormone-growth factor complex; 1.50A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A*
1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A*
3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A*
1gag_A* 1irk_A 3bu3_A* ...
Length = 322
Score = 80.0 bits (198), Expect = 2e-16
Identities = 60/236 (25%), Positives = 95/236 (40%), Gaps = 41/236 (17%)
Query: 19 IKRFIQQGNFGDIYLVE----EKQSHNTFVMKKVLREKMPNTIERD------IMVKSKCP 68
+ R + QG+FG +Y K T V K + E + +M + C
Sbjct: 29 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 88
Query: 69 YIVNLF-YSFQDMNHVYFIMEYVTGGDFVTLL--------ENQPHGYLSESKARFYIYEL 119
++V L Q IME +T GD + L N S SK E+
Sbjct: 89 HVVRLLGVVSQG-QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEI 147
Query: 120 AQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNG----RIKSIVPVGTP 175
A + YL+ +VHRD+ N +++ +K+ DFG + + K ++PV
Sbjct: 148 ADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV--- 204
Query: 176 EYVAPEVLEWMEGNHGSDG-YTGSCDLWSIGVVSYELLT-GSTPF----NYETLDM 225
+++PE L DG +T D+WS GVV +E+ T P+ N + L
Sbjct: 205 RWMSPESL--------KDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF 252
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase;
2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A*
1u54_A* 3eqr_A* 3eqp_B*
Length = 291
Score = 78.4 bits (194), Expect = 5e-16
Identities = 48/245 (19%), Positives = 83/245 (33%), Gaps = 60/245 (24%)
Query: 15 SDFDIKRFIQQGNFGDIY--LVEEKQSHNTFVMKKVLREKMPNTI--------ERDIMVK 64
D + + G+FG + + V K L+ + + E + M
Sbjct: 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 77
Query: 65 SKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYEL----- 119
++ L Y + + E G LL+ L + + F + L
Sbjct: 78 LDHRNLIRL-YGVVLTPPMKMVTELAPLGS---LLD-----RLRKHQGHFLLGTLSRYAV 128
Query: 120 --AQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEY 177
A+ + YL ++HRD+ N+LL+ +K+ DFG R +P Y
Sbjct: 129 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLM-------R---ALPQNDDHY 178
Query: 178 V------------APEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF----NY 220
V APE L + ++ + D W GV +E+ T G P+
Sbjct: 179 VMQEHRKVPFAWCAPESL-----KTRT--FSHASDTWMFGVTLWEMFTYGQEPWIGLNGS 231
Query: 221 ETLDM 225
+ L
Sbjct: 232 QILHK 236
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase,
alternative splicing, ATP-binding, chromosome partition,
differentiation, mRNA processing; 1.73A {Homo sapiens}
PDB: 1wbp_A* 3beg_A* 2x7g_A*
Length = 397
Score = 80.0 bits (197), Expect = 6e-16
Identities = 55/268 (20%), Positives = 93/268 (34%), Gaps = 79/268 (29%)
Query: 17 FDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLR--EKMPNT--IERDIM-----VKSKC 67
+ + R + G+F ++L + Q FV KV++ E T E ++
Sbjct: 39 YHVIRKLGWGHFSTVWLSWDIQ-GKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPND 97
Query: 68 P---YIVNLFYSFQ----DMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELA 120
P +V L F+ + H+ + E V G + + + L + I ++
Sbjct: 98 PNREMVVQLLDDFKISGVNGTHICMVFE-VLGHHLLKWIIKSNYQGLPLPCVKKIIQQVL 156
Query: 121 QAVQYLHG-LGYVHRDIKPDNMLL------------------------------------ 143
Q + YLH +H DIKP+N+LL
Sbjct: 157 QGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPAT 216
Query: 144 -------------SATGHLKLTDFGSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNH 190
+ +K+ D G+A V K+ + T +Y + EVL
Sbjct: 217 AGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTE----DIQTRQYRSLEVLIGS---- 268
Query: 191 GSDGYTGSCDLWSIGVVSYELLTGSTPF 218
GY D+WS +++EL TG F
Sbjct: 269 ---GYNTPADIWSTACMAFELATGDYLF 293
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 81.4 bits (200), Expect = 6e-16
Identities = 104/656 (15%), Positives = 202/656 (30%), Gaps = 170/656 (25%)
Query: 219 NYET--LDMTYSSILA---------CDTEDTVSFPSSIRLSTAMVNFVQSLVQKLDARLN 267
++ET Y IL+ D +D P SI LS +
Sbjct: 8 DFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSI-LSKEEI--------------- 51
Query: 268 MDQVLGHP--------VFDCLDSDPPCIPPPSQENKFHKKDKRKASPSLK-AFQKEGRYL 318
D ++ +F L KF ++ R L + E R
Sbjct: 52 -DHIIMSKDAVSGTLRLFWTL-----LSKQEEMVQKFVEEVLRINYKFLMSPIKTEQR-- 103
Query: 319 DSALPLIGISYTGEPMGANTNTSSDSTLPPSSEDMRHWKRDRLQLLQQLAEAKASLED-- 376
++ + + N N + RLQ +L +A L
Sbjct: 104 QPSMMTRMYIEQRDRL-YNDN----QVFAKYN-------VSRLQPYLKLRQALLELRPAK 151
Query: 377 -------LSCSRTRVLALQA-QVSSLQQDLTSHTSLLSKKEEEIDRLRQEMVKK-----E 423
L +T +AL +Q + L+ K EM++K +
Sbjct: 152 NVLIDGVLGSGKT-WVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQID 210
Query: 424 SDLVATSSDLVATRHELEEVRSELKEKENLEKTDDRKLEVCEVSKELEVLRGELEEQKTA 483
+ + S + + +++EL+ L K + E C L VL ++ K
Sbjct: 211 PNWTSRSDHSSNIKLRIHSIQAELR---RLLK--SKPYENC-----LLVLL-NVQNAKA- 258
Query: 484 TKQWKK-DWYQS---VKERNAAVAE-LKQAQTENEALKEKLTSLEQELKVSEEALATAQN 538
W + + R V + L A T + +L +L + + L +
Sbjct: 259 ---WNAFN-LSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDE--VKSLLLKYLD 312
Query: 539 SLDSKLREHQALSN---TIESMQKEMEQSAVRVREMSGISEKYEK-DRKTLLE-LKSAKE 593
L + L+ + S+ E +R+ + ++ + L ++S+
Sbjct: 313 CRPQDLPR-EVLTTNPRRL-SIIAES------IRDGLATWDNWKHVNCDKLTTIIESSLN 364
Query: 594 RLE-LEVRGYKLDL----ESTR----------RELETNKDQTI--ELRAKSKLEKAEGEL 636
LE E R L S ++ + + +L S +EK E
Sbjct: 365 VLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKES 424
Query: 637 TT--------VREENKKLKQGKIRLV--YSLFK-----DPQPAQSK----------LEKA 671
T ++ + + +V Y++ K D P L+
Sbjct: 425 TISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNI 484
Query: 672 E-GELTTVREENKKLKVSFFF---TLESNSLFWLDPNTFLSSLEDLKSNYTERESKLRSA 727
E E + + + F F + +S W + L++L+ LK Y
Sbjct: 485 EHPERM---TLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLK-FYKPYICD---- 536
Query: 728 NEIIGEYETKITALESTMTRSESYCKEMVEYLETLQ-----KNNDILSHDNEQLRK 778
N+ +YE + A+ + + E +Y + L+ ++ I ++Q+++
Sbjct: 537 ND--PKYERLVNAILDFLPKIEENLICS-KYTDLLRIALMAEDEAIFEEAHKQVQR 589
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo
sapiens} SCOP: d.144.1.7
Length = 287
Score = 78.1 bits (193), Expect = 7e-16
Identities = 51/224 (22%), Positives = 89/224 (39%), Gaps = 29/224 (12%)
Query: 19 IKRFIQQGNFGDIYL-VEEKQSHNTFVMKKVLREKMPNTIERD------IMVKSKCPYIV 71
+ GNFG + V + V KVL++ + IM + PYIV
Sbjct: 14 ADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIV 73
Query: 72 NLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGY 131
L + +ME GG L + + S +++++ ++YL +
Sbjct: 74 RL-IGVCQAEALMLVMEMAGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEEKNF 131
Query: 132 VHRDIKPDNMLLSATGHLKLTDFGSATQVDKNG-----RIKSIVPVGTPEYVAPEVLEWM 186
VHRD+ N+LL + K++DFG + + + R P+ ++ APE +
Sbjct: 132 VHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPL---KWYAPECI--- 185
Query: 187 EGNHGSDGYTGSCDLWSIGVVSYELLT-GSTPF----NYETLDM 225
N ++ D+WS GV +E L+ G P+ E +
Sbjct: 186 --NFRK--FSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAF 225
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor;
HET: V4Z; 2.75A {Homo sapiens}
Length = 329
Score = 78.1 bits (193), Expect = 9e-16
Identities = 55/246 (22%), Positives = 96/246 (39%), Gaps = 43/246 (17%)
Query: 12 VSASDFDIKRFIQQGNFGDIYLVE----EKQSHNTFVMKKVLREKMPNTI-----ERDIM 62
+ D +K + +G FG ++L E + V K L+E + E +++
Sbjct: 38 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELL 97
Query: 63 VKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLL-ENQPHGYLSESKARFYIYEL-- 119
+ +IV F + + + EY+ GD L + P L L
Sbjct: 98 TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGL 157
Query: 120 ----------AQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNG----R 165
A + YL GL +VHRD+ N L+ +K+ DFG + +
Sbjct: 158 GQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVG 217
Query: 166 IKSIVPVGTPEYVAPEVLEWMEGNHGSDG-YTGSCDLWSIGVVSYELLT-GSTPF----N 219
++++P+ ++ PE + +T D+WS GVV +E+ T G P+ N
Sbjct: 218 GRTMLPI---RWMPPESIL--------YRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN 266
Query: 220 YETLDM 225
E +D
Sbjct: 267 TEAIDC 272
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor,
PF670462, transferase-transferase I complex; HET: 0CK;
1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Length = 296
Score = 76.6 bits (189), Expect = 2e-15
Identities = 49/216 (22%), Positives = 85/216 (39%), Gaps = 27/216 (12%)
Query: 17 FDIKRFIQQGNFGDIYLVEEKQSHNTFVMKK-VLREKMPN-TIERDIMVK-SKCPYIVNL 73
+ + R I G+FGDIYL + + +K ++ K P IE I I +
Sbjct: 11 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTI 70
Query: 74 FYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVH 133
+ + ++ +ME + G L + ++ ++ ++Y+H ++H
Sbjct: 71 RWCGAEGDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLL-ADQMISRIEYIHSKNFIH 128
Query: 134 RDIKPDNMLLSATGH---LKLTDFGSATQVDKNGRIKSIVP-------VGTPEYVAPEVL 183
RD+KPDN L+ + + DFG A + ++ R +P GT Y +
Sbjct: 129 RDVKPDNFLMGLGKKGNLVYIIDFGLAKKY-RDARTHQHIPYRENKNLTGTARYASI--- 184
Query: 184 EWMEGNHGSDGYTGSC--DLWSIGVVSYELLTGSTP 217
+ G S DL S+G V GS P
Sbjct: 185 ------NTHLGIEQSRRDDLESLGYVLMYFNLGSLP 214
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2,
autoinhibition, ITAM, hydrogen bonding network, TCR
signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Length = 613
Score = 77.7 bits (191), Expect = 6e-15
Identities = 50/218 (22%), Positives = 88/218 (40%), Gaps = 29/218 (13%)
Query: 25 QGNFGDIYL-VEEKQSHNTFVMKKVLREKMPNTIERD------IMVKSKCPYIVNLFYSF 77
GNFG + V + V KVL++ + IM + PYIV L
Sbjct: 346 CGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRL-IGV 404
Query: 78 QDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIK 137
+ +ME GG L + + S +++++ ++YL +VHR++
Sbjct: 405 CQAEALMLVMEMAGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLA 463
Query: 138 PDNMLLSATGHLKLTDFGSATQVDKN-----GRIKSIVPVGTPEYVAPEVLEWMEGNHGS 192
N+LL + K++DFG + + + R P+ ++ APE + N
Sbjct: 464 ARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPL---KWYAPECI-----NFRK 515
Query: 193 DGYTGSCDLWSIGVVSYELLT-GSTPF----NYETLDM 225
++ D+WS GV +E L+ G P+ E +
Sbjct: 516 --FSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAF 551
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol,
transferase; 2.00A {Oryza sativa japonica group}
Length = 483
Score = 76.2 bits (187), Expect = 1e-14
Identities = 51/216 (23%), Positives = 83/216 (38%), Gaps = 27/216 (12%)
Query: 17 FDIKRFIQQGNFGDIYLVEEKQSHNTFVMK--KVLREKMPNTIERDIMVK-SKCPYIVNL 73
F + R I G+FG+IYL Q++ +K V + E I I N+
Sbjct: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQGGTGIPNV 68
Query: 74 FYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVH 133
+ + ++ +M+ + G L LS ++ V+++H ++H
Sbjct: 69 RWFGVEGDYNVLVMDLL-GPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKSFLH 126
Query: 134 RDIKPDNMLLSATGH---LKLTDFGSATQVDKNGRIKSIVP-------VGTPEYVAPEVL 183
RDIKPDN L+ + + DFG A + ++ +P GT Y +
Sbjct: 127 RDIKPDNFLMGLGRRANQVYIIDFGLAKKY-RDTSTHQHIPYRENKNLTGTARYASV--- 182
Query: 184 EWMEGNHGSDGYTGSC--DLWSIGVVSYELLTGSTP 217
+ G S DL S+G V L GS P
Sbjct: 183 ------NTHLGIEQSRRDDLESLGYVLMYFLRGSLP 212
>3v5q_A NT-3 growth factor receptor; kinase domain, kinase,
phosphorylation, transferase-transfer inhibitor complex;
HET: 0F4; 2.20A {Homo sapiens}
Length = 297
Score = 73.8 bits (182), Expect = 2e-14
Identities = 51/240 (21%), Positives = 95/240 (39%), Gaps = 44/240 (18%)
Query: 19 IKRFIQQGNFGDIYLVE----EKQSHNTFVMKKVLREKMPNTI-----ERDIMVKSKCPY 69
+KR + +G FG ++L E V K L++ E +++ + +
Sbjct: 19 LKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEH 78
Query: 70 IVNLFYSFQDMNHVYFIMEYVTGGDFVTLL-------ENQPHGYLSESKARFYIYEL--- 119
IV + D + + + EY+ GD L G ++K + ++
Sbjct: 79 IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 138
Query: 120 ----AQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKN----GRIKSIVP 171
A + YL +VHRD+ N L+ A +K+ DFG + V +++P
Sbjct: 139 ASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLP 198
Query: 172 VGTPEYVAPEVLEWMEGNHGSDG-YTGSCDLWSIGVVSYELLT-GSTPF----NYETLDM 225
+ ++ PE + +T D+WS GV+ +E+ T G P+ N E ++
Sbjct: 199 I---RWMPPESIM--------YRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIEC 247
>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase,
neurotrophic tyrosine kinase, receptor-related NTRKR2;
2.90A {Homo sapiens}
Length = 289
Score = 73.4 bits (181), Expect = 2e-14
Identities = 49/256 (19%), Positives = 96/256 (37%), Gaps = 50/256 (19%)
Query: 4 VKELRQKNVSASDFDIKRFIQQGNFGDIYLVE----EKQSHNTFVMKKVLREKMPNTIER 59
+KE+ V + + FG +Y V K L++K +
Sbjct: 3 LKEISLSAVR-----FMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLRE 57
Query: 60 D------IMVKSKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLL-ENQPHGYLSESKA 112
+ + + + P +V L + I Y + GD L PH + +
Sbjct: 58 EFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDD 117
Query: 113 RFYI-------------YELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQ 159
+ ++A ++YL VH+D+ N+L+ ++K++D G +
Sbjct: 118 DRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFRE 177
Query: 160 VDKN----GRIKSIVPVGTPEYVAPEVLEWMEGNHGSDG-YTGSCDLWSIGVVSYELLT- 213
V S++P+ ++APE + G ++ D+WS GVV +E+ +
Sbjct: 178 VYAADYYKLLGNSLLPI---RWMAPEAIM--------YGKFSIDSDIWSYGVVLWEVFSY 226
Query: 214 GSTPF----NYETLDM 225
G P+ N + ++M
Sbjct: 227 GLQPYCGYSNQDVVEM 242
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase,
transferase, ATP- binding, phosphorylation,
nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB:
2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Length = 330
Score = 74.0 bits (182), Expect = 3e-14
Identities = 42/218 (19%), Positives = 81/218 (37%), Gaps = 29/218 (13%)
Query: 17 FDIKRFIQQGNFGDIYLVEEKQSHNTFVMK--KVLREKMPNTIERDIMVK-SKCPYIVNL 73
F + + I GNFG++ L + ++ +K + +E + I +
Sbjct: 11 FRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQV 70
Query: 74 FYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVH 133
+Y + ++E + G + L + S +L ++Y+H ++
Sbjct: 71 YYFGPCGKYNAMVLELL--GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIY 128
Query: 134 RDIKPDNMLLSATGHLK-----LTDFGSATQVDKNGRIKSIVP-------VGTPEYVAPE 181
RD+KP+N L+ G+ + DF A + + K +P GT Y++
Sbjct: 129 RDVKPENFLIGRPGNKTQQVIHIIDFALAKEY-IDPETKKHIPYREHKSLTGTARYMSI- 186
Query: 182 VLEWMEGNHGSDGYTGSC--DLWSIGVVSYELLTGSTP 217
+ G S DL ++G + L GS P
Sbjct: 187 --------NTHLGKEQSRRDDLEALGHMFMYFLRGSLP 216
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3;
transferase, pseudo kinase domain, vaccinia related
kinase, ATP-binding; 2.00A {Homo sapiens}
Length = 352
Score = 72.1 bits (177), Expect = 1e-13
Identities = 40/234 (17%), Positives = 78/234 (33%), Gaps = 43/234 (18%)
Query: 17 FDIKRFIQQGNFGDIYLVEEKQS-------HNTFVMKKVLREKMPNTIERDIMVKSKCPY 69
+ +K F + N G +Y + K+ + E++ ++ P
Sbjct: 44 WKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGRLFNEQNFFQRAAKPL 103
Query: 70 IVNLFYSFQDMNHV----------------YFIMEYVTGGDFVTLLENQPHGYLSESKAR 113
VN + + + ++ + G + L+ P LSE
Sbjct: 104 QVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVL 162
Query: 114 FYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLK--LTDFGSATQVDKNGRIKSIVP 171
L A+++LH YVH ++ +N+ + + L +G A + +G+ + V
Sbjct: 163 QVACRLLDALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVE 222
Query: 172 ------VGTPEYVAPEVLEWMEGNHGSDGYTGSC--DLWSIGVVSYELLTGSTP 217
G E+++ G S DL S+G + L G P
Sbjct: 223 GSRSPHEGDLEFIS---------MDLHKGCGPSRRSDLQSLGYCMLKWLYGFLP 267
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene
homolog; kinase, structure, inhibitor, STI-571, gleevec,
transferase activator; HET: STI; 1.60A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Length = 313
Score = 71.5 bits (176), Expect = 1e-13
Identities = 49/232 (21%), Positives = 86/232 (37%), Gaps = 44/232 (18%)
Query: 19 IKRFIQQGNFGDIYLVE----EKQSHNTFVMKKVLREKMPNTIERD------IMVKSKC- 67
+ + G FG + K V K+L+ T ++
Sbjct: 27 FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 86
Query: 68 PYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLL-ENQPHGYLSESKARFYI---------- 116
IVNL + I EY GD + L + S++
Sbjct: 87 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 146
Query: 117 -----YELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNG----RIK 167
Y++A+ + +L +HRD+ N+LL+ K+ DFG A + + +
Sbjct: 147 LLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGN 206
Query: 168 SIVPVGTPEYVAPEVLEWMEGNHGSDG-YTGSCDLWSIGVVSYELLT-GSTP 217
+ +PV +++APE + + YT D+WS G+ +EL + GS+P
Sbjct: 207 ARLPV---KWMAPESIF--------NCVYTFESDVWSYGIFLWELFSLGSSP 247
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation,
signal transduction, MASS spectrometry, transferase;
2.05A {Rattus norvegicus} SCOP: d.144.1.7
Length = 343
Score = 71.2 bits (175), Expect = 2e-13
Identities = 52/250 (20%), Positives = 89/250 (35%), Gaps = 55/250 (22%)
Query: 19 IKRFIQQGNFGDIYLVE----EKQSHNTFVMKKVLREKMPNTIERD------IMVKSKCP 68
R I +G FG ++ T V K+L+E+ ++ D +M + P
Sbjct: 51 YVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNP 110
Query: 69 YIVNLF-YSFQDMNHVYFIMEYVTGGDFVT-LLENQPHGYLSESKARF------------ 114
IV L + + EY+ GD L PH S S +
Sbjct: 111 NIVKLLGVCAVG-KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPP 169
Query: 115 ---------YIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKN-- 163
++A + YL +VHRD+ N L+ +K+ DFG + +
Sbjct: 170 PLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADY 229
Query: 164 --GRIKSIVPVGTPEYVAPEVLEWMEGNHGSDG-YTGSCDLWSIGVVSYELLT-GSTPF- 218
+P+ ++ PE + YT D+W+ GVV +E+ + G P+
Sbjct: 230 YKADGNDAIPI---RWMPPESIF--------YNRYTTESDVWAYGVVLWEIFSYGLQPYY 278
Query: 219 ---NYETLDM 225
+ E +
Sbjct: 279 GMAHEEVIYY 288
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis,
nucleotide-binding, inhibitor, phosphorylation receptor,
transferase, transmembrane; HET: 00J; 1.50A {Homo
sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A*
3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A*
2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A*
3cpc_A* ...
Length = 316
Score = 68.8 bits (169), Expect = 1e-12
Identities = 51/232 (21%), Positives = 104/232 (44%), Gaps = 43/232 (18%)
Query: 19 IKRFIQQGNFGDIYLVE----EKQSHNTFVMKKVLREKMPNTIERD------IMVKSKC- 67
+ + + +G FG + + +K + V K+L+E ++ R I++
Sbjct: 31 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 68 PYIVNLF-YSFQDMNHVYFIMEYVTGGDFVTLL--------------ENQPHGYLSESKA 112
+VNL + + I+E+ G+ T L E+ +L+
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 113 RFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNG----RIKS 168
Y +++A+ +++L +HRD+ N+LLS +K+ DFG A + K+ + +
Sbjct: 151 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 210
Query: 169 IVPVGTPEYVAPEVLEWMEGNHGSDG-YTGSCDLWSIGVVSYELLT-GSTPF 218
+P+ +++APE + D YT D+WS GV+ +E+ + G++P+
Sbjct: 211 RLPL---KWMAPETIF--------DRVYTIQSDVWSFGVLLWEIFSLGASPY 251
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp
contractIle protein-transport protein complex; 24.00A
{Gallus gallus}
Length = 1080
Score = 70.9 bits (174), Expect = 1e-12
Identities = 39/276 (14%), Positives = 102/276 (36%), Gaps = 18/276 (6%)
Query: 351 EDMRHWK-RDRLQLLQQLAEAKASLEDLSCSRTRVLALQAQVSSLQQDLTSHTSLLSKKE 409
+R + +Q Q++ + + + R +ALQA + L K
Sbjct: 811 TFLRRTRAAIIIQKFQRMYVVRKRYQCM---RDATIALQALLRGYLVRNKYQMMLREHKS 867
Query: 410 EEIDRLR---------QEMVKKESDLVATSSDLVATRHELEEVRSELKEKENLEKTDDRK 460
I + +K L ++A + EL++++ E + E +K
Sbjct: 868 IIIQKHVRGWLARVHYHRTLKAIVYLQCCYRRMMA-KRELKKLKIEARSVERYKKLHI-G 925
Query: 461 LE--VCEVSKELEVLRGELEEQKTATKQWKKDWYQSVKERNAAVAELKQAQTENEALKEK 518
LE + ++ ++++ E + + + ++ + V L+ ++ E + +
Sbjct: 926 LENKIMQLQRKIDEQNKEYKSLLEKMNNLEITYSTETEKLRSDVERLRMSEEEAKNATNR 985
Query: 519 LTSLEQELKVSEEALATAQNSLDSKLREHQALSNTIESMQKEMEQSAVRVREMSGISEKY 578
+ SL++E+ + L Q + + E + E+++ ++ +
Sbjct: 986 VLSLQEEIAKLRKELHQTQTEKKTIEEWADKYKHETEQLVSELKEQNTLLKTEKEELNRR 1045
Query: 579 EKDRKTLLELKSAKERLELEVRGYKLDLESTRRELE 614
D+ + ++ +++L E + +LDL R +
Sbjct: 1046 IHDQAKEIT-ETMEKKLVEETKQLELDLNDERLRYQ 1080
Score = 65.1 bits (159), Expect = 6e-11
Identities = 35/226 (15%), Positives = 79/226 (34%), Gaps = 20/226 (8%)
Query: 441 EEVRSELKEKENLEKTDDRKLEVCEVSKELEVLRGELEEQKTATKQWKKDWYQSVKERNA 500
+R L + + K + + + R A + + + + +R
Sbjct: 847 ALLRGYLVRNKYQMMLREHKSIIIQKHVRGWLARVHYHRTLKAIVYLQCCYRRMMAKR-- 904
Query: 501 AVAELKQAQTENEALKEKLTSLEQELKVSEEAL-----------ATAQNSLDSKLREHQA 549
+ +LK E K+ LE ++ + + N + E +
Sbjct: 905 ELKKLKIEARSVERYKKLHIGLENKIMQLQRKIDEQNKEYKSLLEKMNNLEITYSTETEK 964
Query: 550 LSNTIESMQKEMEQSAVRVREMSGISEKYEKDRKTLLELKSAKERLELEVRGYKLDLEST 609
L + +E ++ E++ + + E+ K RK L + ++ K+ +E YK + E
Sbjct: 965 LRSDVERLRMSEEEAKNATNRVLSLQEEIAKLRKELHQTQTEKKTIEEWADKYKHETEQL 1024
Query: 610 RRELETNKDQTIELRAK--SKLEKAEGELT-----TVREENKKLKQ 648
EL+ + + ++ E+T + EE K+L+
Sbjct: 1025 VSELKEQNTLLKTEKEELNRRIHDQAKEITETMEKKLVEETKQLEL 1070
Score = 55.5 bits (134), Expect = 7e-08
Identities = 40/323 (12%), Positives = 90/323 (27%), Gaps = 52/323 (16%)
Query: 474 RGELEEQKTATKQWKKDW--YQSVKERNAAVAELKQAQTENEALKEKLTSLEQELKVSEE 531
RG + + Q + + + AL+ L K
Sbjct: 802 RGHQARCYATFLRRTRAAIIIQKFQRMYVVRKRYQCMRDATIALQALLRGYLVRNKYQMM 861
Query: 532 ALATAQNSLDSKLREHQALSNTIESMQKEME-QSAVRVREMSGISEKYEKDRKTLLELKS 590
+ +R A + +++ + Q R ++ L +LK
Sbjct: 862 LREHKSIIIQKHVRGWLARVHYHRTLKAIVYLQCCYRRM----------MAKRELKKLKI 911
Query: 591 AKERLELEVRGYKLDLESTRRELETNKDQTIELRAKSKLEKAEGELTTVREENKKLKQGK 650
+E + + LE+ +L+ K+++ E ++ E+ L+
Sbjct: 912 EARSVERYKK-LHIGLENKIMQLQ------------RKIDEQNKEYKSLLEKMNNLEITY 958
Query: 651 IRLVYSLFKDPQPAQSKLEKAEGELTTVREENKKLKVSFFFTLESNSLFWLDPNTFLSSL 710
L D +L +E E L+ +
Sbjct: 959 STETEKLRSD----VERLRMSEEEAKNATNRVLSLQ---------------------EEI 993
Query: 711 EDLKSNYTERESKLRSANEIIGEYETKITALESTMTRSESYCKEMVEYLET-LQKNNDIL 769
L+ + +++ ++ E +Y+ + L S + + K E L + +
Sbjct: 994 AKLRKELHQTQTEKKTIEEWADKYKHETEQLVSELKEQNTLLKTEKEELNRRIHDQAKEI 1053
Query: 770 SHDNEQLRKKNNDILSHDNEQLR 792
+ E+ + L D R
Sbjct: 1054 TETMEKKLVEETKQLELDLNDER 1076
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 70.8 bits (173), Expect = 1e-12
Identities = 89/530 (16%), Positives = 158/530 (29%), Gaps = 166/530 (31%)
Query: 23 IQQGNFGDIYLVEEKQSHNTFVMKKVLREK----MP---NTIERDIMVKSKCPYIVNLFY 75
+ G+ + LV +F + L+E+ +P D + L
Sbjct: 11 LSHGSLEHVLLV----PTASFFIASQLQEQFNKILPEPTEGFAADDEPTTP----AELVG 62
Query: 76 SFQDMNHV---------------------YFIMEYVTGGD---FVTLLENQPHGYLSESK 111
F + +V F Y+ G D L + L ++K
Sbjct: 63 KF--LGYVSSLVEPSKVGQFDQVLNLCLTEFENCYLEGNDIHALAAKLLQENDTTLVKTK 120
Query: 112 ARFYIYELAQAVQYLHGLGYVHRDI--KPDNMLLSA--TGHLKL-TDFG----------- 155
EL + Y+ R K ++ L A G+ +L FG
Sbjct: 121 ------ELIKN--YITARIMAKRPFDKKSNSALFRAVGEGNAQLVAIFGGQGNTDDYFEE 172
Query: 156 -----------------SATQ-----VDKNGRIKSIVPVGTPEYVAPEVLEWMEG--NHG 191
+ + + + + G +LEW+E N
Sbjct: 173 LRDLYQTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQGLN------ILEWLENPSNTP 226
Query: 192 SDGYTGSCDLWS---IGVVS---YEL---LTGSTPFNYETLDMTYSSILACDTEDTVSFP 242
Y S + S IGV+ Y + L G TP L ++ V+
Sbjct: 227 DKDYLLSIPI-SCPLIGVIQLAHYVVTAKLLGFTPGE---LRSYLKGATGH-SQGLVT-A 280
Query: 243 SSIRLSTAMVNFVQSLVQKLDARLNMDQVLGHPVFDCLDSDPPCIPPPSQENKFHKKDKR 302
+I + + +F S+ + + VL C ++ P PPS + ++
Sbjct: 281 VAIAETDSWESFFVSVRKAI-------TVLFFIGVRCYEAYPNTSLPPSILEDSLENNEG 333
Query: 303 KASP-------SLKAFQKEGRYLDSALPL---IGISYTGEPMGANTNTSSDSTL--PPSS 350
SP + + Q +S LP + IS N + + + PP S
Sbjct: 334 VPSPMLSISNLTQEQVQDYVNKTNSHLPAGKQVEIS--------LVNGAKNLVVSGPPQS 385
Query: 351 EDMRHWKRDRLQLLQ-QLAEAKASLEDLSCSRTRVLALQAQVSSLQQDL--TS--HTSLL 405
L L L +AKA ++R+ + ++ + L S H+ LL
Sbjct: 386 ----------LYGLNLTLRKAKAPSG---LDQSRIPFSERKLKFSNRFLPVASPFHSHLL 432
Query: 406 SKKEEEI--DRLRQEMVKKESDL------VATSSDLVATRHELEEVRSEL 447
+ I D ++ + D+ SDL R + +
Sbjct: 433 VPASDLINKDLVKNNVSFNAKDIQIPVYDTFDGSDL---RVLSGSISERI 479
Score = 50.4 bits (120), Expect = 2e-06
Identities = 62/373 (16%), Positives = 119/373 (31%), Gaps = 117/373 (31%)
Query: 13 SASDFDIKRFIQ---QGNFGDIYLVEEKQS-HNTF---------VMKKVLRE--KMPNTI 57
+ + + + QGN D Y EE + + T+ + L E +
Sbjct: 148 AVGEGNAQLVAIFGGQGN-TDDYF-EELRDLYQTYHVLVGDLIKFSAETLSELIRTTLDA 205
Query: 58 ER------DIMV----KSKCP---YIVNLFYSF------QDMNHVYFIMEYVTG---GDF 95
E+ +I+ S P Y++++ S Q + H Y + + G G+
Sbjct: 206 EKVFTQGLNILEWLENPSNTPDKDYLLSIPISCPLIGVIQ-LAH-YVVTAKLLGFTPGEL 263
Query: 96 VTLLENQPHGYL--------------SESKARFYIYELA-QAVQYLHGLG------YVHR 134
+ L G ++S F+ +A+ L +G Y +
Sbjct: 264 RSYL----KGATGHSQGLVTAVAIAETDSWESFF--VSVRKAITVLFFIGVRCYEAYPNT 317
Query: 135 DIKP-------DN-------MLLSATG--------HLKLTD--FGSATQVD---KNGRIK 167
+ P +N ML S + ++ T+ + QV+ NG K
Sbjct: 318 SLPPSILEDSLENNEGVPSPML-SISNLTQEQVQDYVNKTNSHLPAGKQVEISLVNGA-K 375
Query: 168 SIVPVGTPEYVAPEVLEWMEGNHGSDGYTGSCDLWSIG------VVSYELLTGSTPFNYE 221
++V G P+ + L + G D I S L ++PF+
Sbjct: 376 NLVVSGPPQSLYGLNL-TLRKAKAPSG----LDQSRIPFSERKLKFSNRFLPVASPFHSH 430
Query: 222 TLDMTYSSILACDTEDTVSFPSSIRLSTAMVNF-----VQSLVQKLDARLNMDQVLGHPV 276
L I ++ VSF + + + + ++ L + R+ +D ++ PV
Sbjct: 431 LLVPASDLINKDLVKNNVSFNAK-DIQIPVYDTFDGSDLRVLSGSISERI-VDCIIRLPV 488
Query: 277 F--DCLDSDPPCI 287
I
Sbjct: 489 KWETTTQFKATHI 501
Score = 38.9 bits (90), Expect = 0.007
Identities = 37/216 (17%), Positives = 62/216 (28%), Gaps = 70/216 (32%)
Query: 624 RAKSKLEKAEG-ELTTVREEN-------------KKLKQGKIRLVYSLFKDPQPAQSKLE 669
RA + + G + + N K++++ +++ D + K+
Sbjct: 1648 RADNHFKDTYGFSILDIVINNPVNLTIHFGGEKGKRIRENYSAMIFETIVDGKLKTEKIF 1707
Query: 670 KAEGELTTVREENKKLKVSFFFTLESNSLFWLDPNT----FLSS---LEDLKSNYTERES 722
K E +T S+ F E L T L EDLKS
Sbjct: 1708 KEINEHST----------SYTFRSEKGLLS-ATQFTQPALTLMEKAAFEDLKSKG----- 1751
Query: 723 KLRSANEI-----IGEYETKITAL---------ESTM----TRSESYCKEMVEYLETLQK 764
L A+ +GEY AL ES + R + V E +
Sbjct: 1752 -LIPADATFAGHSLGEY----AALASLADVMSIESLVEVVFYRGM-TMQVAVPRDELGRS 1805
Query: 765 NNDIL---------SHDNEQLRKKNNDILSHDNEQL 791
N ++ S E L+ + +
Sbjct: 1806 NYGMIAINPGRVAASFSQEALQYVVERVGKRTGWLV 1841
Score = 36.2 bits (83), Expect = 0.055
Identities = 46/288 (15%), Positives = 86/288 (29%), Gaps = 87/288 (30%)
Query: 417 QE--MVKKESDLVATSSDLVATRHELEEVRSELKEKENLEKTDDRKLEVCEVSKELEVLR 474
QE M DL TS A + + K+ D V L +
Sbjct: 1627 QEQGMGM---DLYKTSK--AA-QDVWNRADNHFKDTYGFSILD----IVINNPVNLTIHF 1676
Query: 475 GELEEQKTATKQWKKDWYQSVKERNAAVAELKQAQTENEALKEKLTSL-----EQELKVS 529
G + ++ ++ Y ++ +LK + E + E TS + L +
Sbjct: 1677 GGEKGKRI------RENYSAMIFETIVDGKLKTEKIFKE-INEHSTSYTFRSEKGLLSAT 1729
Query: 530 EE---ALATAQNSLDSKLRE------------H-----QAL---------SNTIE----- 555
+ AL + + L+ H AL + +E
Sbjct: 1730 QFTQPALTLMEKAAFEDLKSKGLIPADATFAGHSLGEYAALASLADVMSIESLVEVVFYR 1789
Query: 556 --SMQKEMEQS----------AVRVREMSGISEKYEKDRKTLLELKSAKERLELEV---- 599
+MQ + + A+ ++ ++ + ++E + +E+
Sbjct: 1790 GMTMQVAVPRDELGRSNYGMIAINPGRVAASFS--QEALQYVVERVGKRTGWLVEIVNYN 1847
Query: 600 --------RGYKLDLESTRRELETNKDQTI---ELRAKSKLEKAEGEL 636
G L++ L K Q I EL+ LE+ EG L
Sbjct: 1848 VENQQYVAAGDLRALDTVTNVLNFIKLQKIDIIELQKSLSLEEVEGHL 1895
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET;
nucleotide-binding, hirschsprung disease,
phosphorylation, disease mutation; HET: ACK; 2.00A {Homo
sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A*
2ivv_A*
Length = 314
Score = 67.3 bits (165), Expect = 3e-12
Identities = 52/253 (20%), Positives = 104/253 (41%), Gaps = 53/253 (20%)
Query: 15 SDFDIKRFIQQGNFGDIYLVE----EKQSHNTFVMKKVLREKMPNTIERD------IMVK 64
+ + + + +G FG + + ++ T V K+L+E + RD ++ +
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 65 SKCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVT-LLENQPHGYLSESKARFYI------- 116
P+++ L+ + + I+EY G L E++ G
Sbjct: 83 VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHP 142
Query: 117 --------------YELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDK 162
++++Q +QYL + VHRD+ N+L++ +K++DFG + V +
Sbjct: 143 DERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYE 202
Query: 163 NG----RIKSIVPVGTPEYVAPEVLEWMEGNHGSDG-YTGSCDLWSIGVVSYELLT-GST 216
R + +PV +++A E L D YT D+WS GV+ +E++T G
Sbjct: 203 EDSYVKRSQGRIPV---KWMAIESL--------FDHIYTTQSDVWSFGVLLWEIVTLGGN 251
Query: 217 PF----NYETLDM 225
P+ ++
Sbjct: 252 PYPGIPPERLFNL 264
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting
of N- and C-lobes, transferase; HET: PTR ACP; 1.80A
{Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A*
2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A*
3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A*
3js2_A* 3ky2_A ...
Length = 334
Score = 66.9 bits (164), Expect = 5e-12
Identities = 55/249 (22%), Positives = 98/249 (39%), Gaps = 50/249 (20%)
Query: 15 SDFDIKRFIQQGNFGDIY------LVEEKQSHNTFVMKKVLREKMPNTIERD------IM 62
+ + + +G FG + + ++K V K+L++ D +M
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 63 VKSKC-PYIVNLF-YSFQDMNHVYFIMEYVTGGDFVTLL--------------ENQPHGY 106
I+NL QD +Y I+EY + G+ L P
Sbjct: 95 KMIGKHKNIINLLGACTQDG-PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 107 LSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNG-- 164
++ Y+LA+ ++YL +HRD+ N+L++ +K+ DFG A ++
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYY 213
Query: 165 --RIKSIVPVGTPEYVAPEVLEWMEGNHGSDG-YTGSCDLWSIGVVSYELLT-GSTPF-- 218
+PV +++APE L D YT D+WS GV+ +E+ T G +P+
Sbjct: 214 KKTTNGRLPV---KWMAPEALF--------DRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
Query: 219 --NYETLDM 225
E +
Sbjct: 263 IPVEELFKL 271
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding,
membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Length = 345
Score = 65.9 bits (161), Expect = 1e-11
Identities = 46/234 (19%), Positives = 77/234 (32%), Gaps = 46/234 (19%)
Query: 17 FDIKRFIQQGNFGDIYLVEEKQSHN---TFVMK-------------KVLRE--KMPNTIE 58
+ + + I G FG IYL V+K K + K +
Sbjct: 39 WVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKK 98
Query: 59 RDIMVKSKCPYIVNLFYS----FQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARF 114
+ I + S F+ ++ + +ME + G D + +G +
Sbjct: 99 WIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQ--NGTFKK-STVL 154
Query: 115 YI-YELAQAVQYLHGLGYVHRDIKPDNMLL--SATGHLKLTDFGSATQVDKNGRIKSIVP 171
+ + ++Y+H YVH DIK N+LL + L D+G + + NG K
Sbjct: 155 QLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQE 214
Query: 172 ------VGTPEYVAPEVLEWMEGNHGSDGYTGSC--DLWSIGVVSYELLTGSTP 217
GT E+ + G S D+ +G L G P
Sbjct: 215 NPRKGHNGTIEFTS---------LDAHKGVALSRRSDVEILGYCMLRWLCGKLP 259
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain,
transferase, transferase-transferase inhibito; HET: 07J;
2.80A {Homo sapiens}
Length = 382
Score = 65.5 bits (160), Expect = 2e-11
Identities = 56/244 (22%), Positives = 98/244 (40%), Gaps = 48/244 (19%)
Query: 19 IKRFIQQGNFGDIY------LVEEKQSHNTFVMKKVLREKMPNTIERD------IMVKSK 66
+ + + +G FG + L ++K + T V K+L+ D +M
Sbjct: 73 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 132
Query: 67 C-PYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLL--------------ENQPHGYLSESK 111
I+NL + +Y I+EY + G+ L + P LS
Sbjct: 133 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 192
Query: 112 ARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNG----RIK 167
Y++A+ ++YL +HRD+ N+L++ +K+ DFG A +
Sbjct: 193 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 252
Query: 168 SIVPVGTPEYVAPEVLEWMEGNHGSDG-YTGSCDLWSIGVVSYELLT-GSTPF----NYE 221
+PV +++APE L D YT D+WS GV+ +E+ T G +P+ E
Sbjct: 253 GRLPV---KWMAPEALF--------DRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 301
Query: 222 TLDM 225
+
Sbjct: 302 LFKL 305
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting
of N- and C-lobes, transferase; 2.40A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1xr0_A
Length = 370
Score = 65.5 bits (160), Expect = 2e-11
Identities = 54/248 (21%), Positives = 97/248 (39%), Gaps = 48/248 (19%)
Query: 15 SDFDIKRFIQQGNFGDIY------LVEEKQSHNTFVMKKVLREKMPNTIERD------IM 62
+ + + +G FG + + ++K V K+L++ D +M
Sbjct: 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 140
Query: 63 VKSKC-PYIVNLFYSFQDMNHVYFIMEYVTGGDFVT-LLENQPHGYLSESKARFYI---- 116
I+NL + +Y I+EY + G+ L +P G
Sbjct: 141 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 200
Query: 117 ---------YELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNG--- 164
Y+LA+ ++YL +HRD+ N+L++ +K+ DFG A ++
Sbjct: 201 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 260
Query: 165 -RIKSIVPVGTPEYVAPEVLEWMEGNHGSDG-YTGSCDLWSIGVVSYELLT-GSTPF--- 218
+PV +++APE L D YT D+WS GV+ +E+ T G +P+
Sbjct: 261 KTTNGRLPV---KWMAPEALF--------DRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 309
Query: 219 -NYETLDM 225
E +
Sbjct: 310 PVEELFKL 317
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A
{Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A*
2p4i_A* 3l8p_A* 2wqb_A*
Length = 327
Score = 64.6 bits (158), Expect = 3e-11
Identities = 52/244 (21%), Positives = 96/244 (39%), Gaps = 48/244 (19%)
Query: 15 SDFDIKRFIQQGNFGDIYLVE-EKQSHNTFVMKKVLREKMPNTIERD------IMVKSKC 67
+D + I +GNFG + +K K ++E RD ++ K
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 68 -PYIVNLFYSFQDMNHVYFIMEYVTGGDFVT-LLENQPHGYLSESKARFYI--------- 116
P I+NL + + ++Y +EY G+ + L +++
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 117 ----YELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVD-----KNGRIK 167
++A+ + YL ++HRD+ N+L+ K+ DFG + + GR+
Sbjct: 145 LHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRL- 203
Query: 168 SIVPVGTPEYVAPEVLEWMEGNHGSDG-YTGSCDLWSIGVVSYELLT-GSTPF----NYE 221
PV ++A E L YT + D+WS GV+ +E+++ G TP+ E
Sbjct: 204 ---PV---RWMAIESLN--------YSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE 249
Query: 222 TLDM 225
+
Sbjct: 250 LYEK 253
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain,
kinase inhibitor complex, transferase; HET: 5CN; 1.80A
{Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A*
3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Length = 333
Score = 64.2 bits (157), Expect = 4e-11
Identities = 50/228 (21%), Positives = 85/228 (37%), Gaps = 40/228 (17%)
Query: 19 IKRFIQQGNFGDIYLVE----EKQSHNTFVMKKVLREKMPNTIERD------IMVKSKC- 67
+ + G FG + K+ V K+L+ + IM
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 68 PYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLL------------ENQPHGYLSESKARFY 115
IVNL + V I EY GD + L + S +
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHF 169
Query: 116 IYELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNG----RIKSIVP 171
++AQ + +L +HRD+ N+LL+ K+ DFG A + + + + +P
Sbjct: 170 SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 229
Query: 172 VGTPEYVAPEVLEWMEGNHGSDG-YTGSCDLWSIGVVSYELLT-GSTP 217
V +++APE + D YT D+WS G++ +E+ + G P
Sbjct: 230 V---KWMAPESIF--------DCVYTVQSDVWSYGILLWEIFSLGLNP 266
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition,
juxtamembrane domain, transferase; 2.10A {Homo sapiens}
SCOP: d.144.1.7
Length = 344
Score = 63.9 bits (156), Expect = 6e-11
Identities = 53/238 (22%), Positives = 93/238 (39%), Gaps = 51/238 (21%)
Query: 19 IKRFIQQGNFGDIYLVE----EKQSHNTFVMKKVLREKMPNTIERD------IMVKSKC- 67
+ + G FG + K + V K+L+EK ++ +M +
Sbjct: 49 FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSH 108
Query: 68 PYIVNLF-YSFQDMNHVYFIMEYVTGGDFVT-LLENQPHGYLSESKARFYI--------- 116
IVNL +Y I EY GD + L + E +
Sbjct: 109 ENIVNLLGACTLS-GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLN 167
Query: 117 -----------YELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNG- 164
Y++A+ +++L VHRD+ N+L++ +K+ DFG A + +
Sbjct: 168 VLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSN 227
Query: 165 ---RIKSIVPVGTPEYVAPEVLEWMEGNHGSDG-YTGSCDLWSIGVVSYELLT-GSTP 217
R + +PV +++APE L +G YT D+WS G++ +E+ + G P
Sbjct: 228 YVVRGNARLPV---KWMAPESLF--------EGIYTIKSDVWSYGILLWEIFSLGVNP 274
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK,
transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB:
2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Length = 307
Score = 62.2 bits (152), Expect = 1e-10
Identities = 34/98 (34%), Positives = 52/98 (53%), Gaps = 13/98 (13%)
Query: 120 AQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNGRIKSIVP---VGTPE 176
A + +LH ++HRDIK N+LL K++DFG A +K ++++ VGT
Sbjct: 143 ANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFA--QTVMTSRIVGTTA 200
Query: 177 YVAPEVLEWMEGNHGSDGYTGSCDLWSIGVVSYELLTG 214
Y+APE + G T D++S GVV E++TG
Sbjct: 201 YMAPE---ALRGE-----ITPKSDIYSFGVVLLEIITG 230
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino
acid sequence, binding sites, domain, models, molecular;
HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Length = 364
Score = 62.9 bits (153), Expect = 2e-10
Identities = 48/243 (19%), Positives = 86/243 (35%), Gaps = 49/243 (20%)
Query: 11 NVSASDFDIKRFIQQGNFGDIYLVEEKQSHNT-----FVMKKVLREKMPNTIERDIMVKS 65
+++A+ + + I QG FG IYL + S + V+K + P E ++
Sbjct: 31 DMAAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRA 90
Query: 66 KCPYIVNLFYSFQDMNHV------YFIMEYVTGGDFVTL--------LENQPHGYLSESK 111
P + + + + ++ + G + + L+ +
Sbjct: 91 AKPEQIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRFGSDLQK----IYEANA 146
Query: 112 ARFYI-------YELAQAVQYLHGLGYVHRDIKPDNMLLSA--TGHLKLTDFGSATQVDK 162
RF + ++Y+H YVH DIK N+LL+ + L D+G A +
Sbjct: 147 KRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCP 206
Query: 163 NGRIKSIVP------VGTPEYVAPEVLEWMEGNHGSDGYTGSC--DLWSIGVVSYELLTG 214
G K+ GT E+ + +G S DL +G + LTG
Sbjct: 207 EGVHKAYAADPKRCHDGTIEFTS---------IDAHNGVAPSRRGDLEILGYCMIQWLTG 257
Query: 215 STP 217
P
Sbjct: 258 HLP 260
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain,
kinase, transferase-transferase inhibitor COM; HET: 42Q;
1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A*
3hng_A*
Length = 359
Score = 60.7 bits (147), Expect = 7e-10
Identities = 41/205 (20%), Positives = 90/205 (43%), Gaps = 20/205 (9%)
Query: 19 IKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMVKSKCPYIVNLFYSFQ 78
I F + GN YL ++ + K + + + + + ++ S
Sbjct: 105 IVEFCKFGNLST-YLRSKRNEFVPYKTKGARFRQGKDYVGAIPV--DLKRRLDSITSSQS 161
Query: 79 DMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKP 138
+ + + ++ + E+ +L+ Y +++A+ +++L +HRD+
Sbjct: 162 SASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAA 221
Query: 139 DNMLLSATGHLKLTDFGSATQVDKNG----RIKSIVPVGTPEYVAPEVLEWMEGNHGSDG 194
N+LLS +K+ DFG A + K+ + + +P+ +++APE + D
Sbjct: 222 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL---KWMAPETIF--------DR 270
Query: 195 -YTGSCDLWSIGVVSYELLT-GSTP 217
YT D+WS GV+ +E+ + G++P
Sbjct: 271 VYTIQSDVWSFGVLLWEIFSLGASP 295
Score = 32.6 bits (74), Expect = 0.47
Identities = 25/149 (16%), Positives = 60/149 (40%), Gaps = 18/149 (12%)
Query: 19 IKRFIQQGNFGDIYLVE----EKQSHNTFVMKKVLREKMPNT------IERDIMVKSKC- 67
+ + + +G FG + + +K + V K+L+E ++ E I++
Sbjct: 26 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 85
Query: 68 PYIVNLF-YSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYL 126
+VNL + + I+E+ G+ T L ++ + ++ Y + A+ Q
Sbjct: 86 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP------YKTKGARFRQGK 139
Query: 127 HGLGYVHRDIKPDNMLLSATGHLKLTDFG 155
+G + D+K ++++ + F
Sbjct: 140 DYVGAIPVDLKRRLDSITSSQSSASSGFV 168
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex,
layered beta- sheets, transferas; HET: SEP TPO; 3.20A
{Solanum pimpinellifolium} PDB: 3hgk_A*
Length = 321
Score = 59.1 bits (144), Expect = 2e-09
Identities = 39/145 (26%), Positives = 61/145 (42%), Gaps = 21/145 (14%)
Query: 83 VYFIMEYVTGGDFVTLLENQPHGYLSES-----KARFYI-YELAQAVQYLHGLGYVHRDI 136
+Y +Y+ G+ L+ +G + + R I A+ + YLH +HRD+
Sbjct: 113 IY---KYMENGN----LKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDV 165
Query: 137 KPDNMLLSATGHLKLTDFGSATQVDKNGRIK-SIVPVGTPEYVAPEVLEWMEGNHGSDGY 195
K N+LL K+TDFG + + + + S V GT Y+ PE SD Y
Sbjct: 166 KSINILLDENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVY 225
Query: 196 TGSCDLWSIGVVSYELLTGSTPFNY 220
S GVV +E+L +
Sbjct: 226 -------SFGVVLFEVLCARSAIVQ 243
>1cii_A Colicin IA; bacteriocin, ION channel formation, transmembrane
protein; 3.00A {Escherichia coli} SCOP: f.1.1.1 h.4.3.1
Length = 602
Score = 57.8 bits (138), Expect = 1e-08
Identities = 43/447 (9%), Positives = 131/447 (29%), Gaps = 30/447 (6%)
Query: 348 PSSEDMRHWKRDRLQLLQQLAEAKASLEDLSCSRTRVL-ALQAQVSSLQQDLTSHTSLLS 406
P+ D+ ++ L+ + E+ + L A A + L + + +
Sbjct: 43 PTRSDIEKRDKEITAYKNTLSAQQKENENKRTEAGKRLSAAIAAREKDENTLKTLRAGNA 102
Query: 407 KKEEEIDRLRQEMVKKESDLVATSSDLVATRHELEEVRSELKEKENLEKTDDRKLEVCEV 466
+ + + + + + + L L + E +
Sbjct: 103 DAADITRQEFRLLQAELREYGFRTEIAGYDALRLHTESRMLFADA--DSLRISPREARSL 160
Query: 467 SKELEVLRGELEEQKTATKQWKKDWYQSVKERNAAVAEL-KQAQTENEALKEKLTSLEQE 525
++ E + + + ++ + + ++EL K L + L +
Sbjct: 161 IEQAEKRQKDAQNADKKAADMLAEYERRKGILDTRLSELEKNGGAALAVLDAQQARLLGQ 220
Query: 526 LKVSEEALATAQNSLDSKLREHQALSNTIESMQKEMEQSAVRVREMSGISEKYEKDRKTL 585
++ A++ A+N L S N + ++++ Q + +S + R +
Sbjct: 221 QTRNDRAISEARNKLSSVTESLNTARNALTRAEQQLTQQKNTPDGKTIVSPEKFPGRSST 280
Query: 586 LELKSAKERLELEVRGYKLDLESTRRELETNKDQTIELRAKSKLEKAEGELTTVREENKK 645
+ + + ++ T + N+ L + S L+ L +
Sbjct: 281 ND-----SIVVSGDPRFAGTIKITTSAVIDNRANLNYLLSHSGLDYKRNILNDRNPVVTE 335
Query: 646 LKQGKIRLVYSLFKDPQPAQSKLEKAEGELTTVREENKKLKVSFFFTLESNSLFWLDPNT 705
+G ++ + + + +L A ++T+ +
Sbjct: 336 DVEGDKKIYNAEVAEWDKLRQRLLDARNKITSAESAVNSAR------------------- 376
Query: 706 FLSSLEDLKSNYTERESKLRSANEIIGEYETKITALESTMTRSESYCKEMVEYLETLQKN 765
++L + L + + +++ + + + E+ + +
Sbjct: 377 --NNLSARTNEQKHANDALNALLKEKENIRNQLSGINQKIAEEKRKQDELKATKDAINFT 434
Query: 766 NDILSHDNEQLRKKNNDILSHDNEQLR 792
+ L +E+ K + Q +
Sbjct: 435 TEFLKSVSEKYGAKAEQLAREMAGQAK 461
Score = 45.5 bits (106), Expect = 6e-05
Identities = 42/360 (11%), Positives = 97/360 (26%), Gaps = 6/360 (1%)
Query: 422 KESDLVATSSDLVATRHELEEVRSELKE--KENLEKTDDRKLEVCEVSKELEVLRGELEE 479
+ D T SD+ E+ ++ L KEN K + + E L+
Sbjct: 37 EWVDDSPTRSDIEKRDKEITAYKNTLSAQQKENENKRTEAGKRLSAAIAAREKDENTLKT 96
Query: 480 QKTATKQWKKDWYQSVKERNAAVAELKQAQTENEALKEKLTSLEQELKVSEEALATAQNS 539
+ Q + A + E +L + + L ++L +
Sbjct: 97 LRAGNADAADITRQEFRLLQAELREYGFRTEIAGYDALRLHTESRMLFADADSLRISPRE 156
Query: 540 LDSKLREHQALSNTIESMQKEMEQSAVRVREMSGISEKYEKDRKTLLELKSAKERLELEV 599
S + + + ++ K+ GI + + LE L+
Sbjct: 157 ARSLIEQAEKRQKDAQNADKKAADMLAEYERRKGILDTRLSE----LEKNGGAALAVLDA 212
Query: 600 RGYKLDLESTRRELETNKDQTIELRAKSKLEKAEGELTTVREENKKLKQGKIRLVYSLFK 659
+ +L + TR + ++ + L A LT ++ + K +
Sbjct: 213 QQARLLGQQTRNDRAISEARNKLSSVTESLNTARNALTRAEQQLTQQKNTPDGKTIVSPE 272
Query: 660 DPQPAQSKLEKAEGELTTVREENKKLKVSFFFTLESNSLFWLDPNTFLSSLEDLKSNYTE 719
S + K+ S +N + L + L
Sbjct: 273 KFPGRSSTNDSIVVSGDPRFAGTIKITTSAVIDNRANLNYLLSHSGLDYKRNILNDRNPV 332
Query: 720 RESKLRSANEIIGEYETKITALESTMTRSESYCKEMVEYLETLQKNNDILSHDNEQLRKK 779
+ +I + L + + + + + + N +++ +
Sbjct: 333 VTEDVEGDKKIYNAEVAEWDKLRQRLLDARNKITSAESAVNSARNNLSARTNEQKHANDA 392
>1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1
PDB: 2tma_A 2w49_A 2w4u_A
Length = 284
Score = 56.2 bits (135), Expect = 1e-08
Identities = 44/270 (16%), Positives = 103/270 (38%), Gaps = 18/270 (6%)
Query: 386 ALQAQVSSLQQDLTSHTSLLSKKEEEIDRLRQEMVKKESDLVATSSDLVATRHELEEVRS 445
+ + D + + E+E+ L++++ E +L S L + +LE
Sbjct: 17 NALDRADEAEADKKAAEDRSKQLEDELVSLQKKLKATEDELDKYSEALKDAQEKLELAEK 76
Query: 446 ELKEKENL------------EKTDDRKLEVCEVSKELEVLRGELEEQKTATKQWKKDWYQ 493
+ + E E+ D + + ++LE +E + K + +
Sbjct: 77 KATDAEADVASLNRRIQLFEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQK 136
Query: 494 SVKERNAAVAELKQAQTENEALKEKLTSLEQELKVSEEALATAQNSLDSKLREHQALSNT 553
++ +LK+A+ E K + ++L + E L A+ + + L
Sbjct: 137 DEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEE 196
Query: 554 IESMQKEMEQSAVRVREMSGISEKYEKDRKTLL----ELKSAKERLELEVRGYKLDLEST 609
I+++ ++ + + S +KYE++ K L E ++ E E V + ++
Sbjct: 197 IKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDL 256
Query: 610 RRELETNKDQTIELRAKSKLEKAEGELTTV 639
EL K + + +L+ A ++T++
Sbjct: 257 EDELYAQKLKYKAISE--ELDHALNDMTSI 284
Score = 55.0 bits (132), Expect = 3e-08
Identities = 42/265 (15%), Positives = 102/265 (38%), Gaps = 4/265 (1%)
Query: 386 ALQAQVSSLQQDLTSHTSLLSKKEEEIDRLRQEMVKKESDLVATSSDLVATRHELEEVRS 445
L+ + + E+ +L E+V + L AT +L L++ +
Sbjct: 10 MLKLDKENALDRADEAEADKKAAEDRSKQLEDELVSLQKKLKATEDELDKYSEALKDAQE 69
Query: 446 ELKEKENLEKTDDRKLEVCEVSKELEVLRGELEEQKTATKQWKKDWYQSVKERNAAVAEL 505
+L+ E +K D + +V +++ +++ EL+ + + ++ K + + +
Sbjct: 70 KLELAE--KKATDAEADVASLNRRIQLFEEELDRAQERLATALQKLEEAEKAADESERGM 127
Query: 506 KQAQTENEALKEKLTSLEQELKVSEEALATAQNSLDSKLREHQALSNTIESMQKEMEQSA 565
K ++ + +EK+ E +LK ++ A + R+ + + +E ++ E S
Sbjct: 128 KVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSE 187
Query: 566 VRVREMSGISEKYEKDRKTLLELKSAKERLELEVRGYKLDLESTRRELETNKDQTIELRA 625
+ E+ + + K+L + E + L +E ET +
Sbjct: 188 GKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVT 247
Query: 626 K--SKLEKAEGELTTVREENKKLKQ 648
K ++ E EL + + K + +
Sbjct: 248 KLEKSIDDLEDELYAQKLKYKAISE 272
Score = 45.0 bits (106), Expect = 5e-05
Identities = 42/272 (15%), Positives = 103/272 (37%), Gaps = 4/272 (1%)
Query: 513 EALKEKLTSLEQELKVSEEALATAQNSLDSKLREHQALSNTIESMQKEMEQSAVRVREMS 572
+A+K+K+ L+ + + + + A+ + + L + + S+QK+++ + E+
Sbjct: 2 DAIKKKMQMLKLDKENALDRADEAEADKKAAEDRSKQLEDELVSLQKKLKATE---DELD 58
Query: 573 GISEKYEKDRKTLLELKSAKERLELEVRGYKLDLESTRRELETNKDQTIELRAK-SKLEK 631
SE + ++ L + E +V ++ EL+ +++ K + EK
Sbjct: 59 KYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLFEEELDRAQERLATALQKLEEAEK 118
Query: 632 AEGELTTVREENKKLKQGKIRLVYSLFKDPQPAQSKLEKAEGELTTVREENKKLKVSFFF 691
A E + + Q + + A+ E A+ + V + ++
Sbjct: 119 AADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLER 178
Query: 692 TLESNSLFWLDPNTFLSSLEDLKSNYTERESKLRSANEIIGEYETKITALESTMTRSESY 751
E L ++ + +N E++ ++ +YE +I L + +E+
Sbjct: 179 AEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETR 238
Query: 752 CKEMVEYLETLQKNNDILSHDNEQLRKKNNDI 783
+ + L+K+ D L + + K I
Sbjct: 239 AEFAERSVTKLEKSIDDLEDELYAQKLKYKAI 270
Score = 43.9 bits (103), Expect = 1e-04
Identities = 39/295 (13%), Positives = 102/295 (34%), Gaps = 13/295 (4%)
Query: 470 LEVLRGELEEQKTATKQWKKDWYQSVKERNAAVAELKQAQTENEALKEKLTSLEQELKVS 529
++ ++ +++ K + ++ ++ AA KQ + E +L++KL + E EL
Sbjct: 1 MDAIKKKMQMLKLDKENALDRADEAEADKKAAEDRSKQLEDELVSLQKKLKATEDELDKY 60
Query: 530 EEALATAQNSLDSKLREHQALSNTIESMQKEMEQSAVRVREMSGISEKYEKDRKTLLELK 589
EAL AQ L+ ++ + S+ + ++ + + + +
Sbjct: 61 SEALKDAQEKLELAEKKATDAEADVASLNRRIQLFEEELDRAQERLATALQKLEEAEKAA 120
Query: 590 SAKERLELEVRGYKLDLESTRRELETNKDQTIELR--AKSKLEKAEGELTTVREENKKLK 647
ER + E E + + A K E+ +L + + ++ +
Sbjct: 121 DESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAE 180
Query: 648 QGKIRLVYSLFKDPQPAQSKLEKAEGELTTVREENKKLKVSFFFTLESNSLFWLDPNTFL 707
+ + ++ K + E E+ TV K L+ + + +
Sbjct: 181 ERA-----------ELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLS 229
Query: 708 SSLEDLKSNYTERESKLRSANEIIGEYETKITALESTMTRSESYCKEMVEYLETL 762
L++ ++ E + + I + E ++ A + + + ++
Sbjct: 230 DKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTSI 284
Score = 30.8 bits (69), Expect = 1.5
Identities = 26/144 (18%), Positives = 55/144 (38%), Gaps = 6/144 (4%)
Query: 351 EDMRHWKRDRLQLLQQLAEAKASLEDLSCSR----TRVLALQAQVSSLQQDLTSHTSLLS 406
+ + QL EAK ED +++ +++ + ++ +
Sbjct: 132 SRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCA 191
Query: 407 KKEEEIDRLRQEMVKKESDLVATSSDLVATRHELEEVRSELKEKENLEKTDDRKLEVCEV 466
+ EEEI + + E+ S E++ + +LKE E + + + V ++
Sbjct: 192 ELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAE--TRAEFAERSVTKL 249
Query: 467 SKELEVLRGELEEQKTATKQWKKD 490
K ++ L EL QK K ++
Sbjct: 250 EKSIDDLEDELYAQKLKYKAISEE 273
Score = 29.2 bits (65), Expect = 5.1
Identities = 41/240 (17%), Positives = 84/240 (35%), Gaps = 16/240 (6%)
Query: 540 LDSKLREHQALSNTIESMQKEMEQSAVRVREMSGISEKYEKDRKTLLELKSAKERLELEV 599
+D+ ++ Q L E+ +++ + S++ E + L+ L+ + E E+
Sbjct: 1 MDAIKKKMQMLKLDKENALDRADEAEADKKAAEDRSKQLEDE---LVSLQKKLKATEDEL 57
Query: 600 RGYKLDLESTRRELETNKDQTIELRAKSKLEKAEGELTTVREENKKLKQGKIRLVYSLFK 659
Y L+ + +LE A+ K AE ++ ++ + ++ R L
Sbjct: 58 DKYSEALKDAQEKLE---------LAEKKATDAEADVASLNRRIQLFEEELDRAQERL-- 106
Query: 660 DPQPAQSKLEKAEGELTTVREENKKLKVSFFFTLESNSLFWLDPNTFLSSLEDLKSNYTE 719
A KLE+AE K ++ E + + ED Y E
Sbjct: 107 --ATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEE 164
Query: 720 RESKLRSANEIIGEYETKITALESTMTRSESYCKEMVEYLETLQKNNDILSHDNEQLRKK 779
KL + E + E E K + L++L+ + S ++ ++
Sbjct: 165 VARKLVIIESDLERAEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEE 224
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon,
coiled post-transcriptional, gene regulation, chaperone;
HET: EPE; 2.20A {Helicobacter pylori}
Length = 256
Score = 52.8 bits (126), Expect = 1e-07
Identities = 23/160 (14%), Positives = 65/160 (40%)
Query: 390 QVSSLQQDLTSHTSLLSKKEEEIDRLRQEMVKKESDLVATSSDLVATRHELEEVRSELKE 449
++S L +++ S L+ +K +++D+ + K ++ + +A + ++ + L++
Sbjct: 12 EISHLDKEIDSLEPLIREKRKDLDKALNDKEAKNKAILNLEEEKLALKLQVSKNEQTLQD 71
Query: 450 KENLEKTDDRKLEVCEVSKELEVLRGELEEQKTATKQWKKDWYQSVKERNAAVAELKQAQ 509
+ +K+ + +EL L E + K + Q ++ E + + +
Sbjct: 72 TNAKIASIQKKMSEIKSERELRSLNIEEDIAKERSNQANREIENLQNEIKRKSEKQEDLK 131
Query: 510 TENEALKEKLTSLEQELKVSEEALATAQNSLDSKLREHQA 549
E L++ LE ++ + + Q + K +
Sbjct: 132 KEMLELEKLALELESLVENEVKNIKETQQIIFKKKEDLVE 171
Score = 44.7 bits (105), Expect = 5e-05
Identities = 18/195 (9%), Positives = 62/195 (31%), Gaps = 18/195 (9%)
Query: 443 VRSELKEKENLEKTDDRKLEVCEVSKELEVLRGELEEQKTATKQWKKDWYQSVKERNAAV 502
+ LK+ + D + + +E + K A K
Sbjct: 3 SNTHLKQLIEISHLDKEIDSLEPLIREKRKDLDKALNDKEAKN----------KAILNLE 52
Query: 503 AELKQAQTENEALKEKLTSLEQELKVSEEALATAQNSLDSKLREHQALSNTIESMQKEME 562
E + + ++ L ++ ++ ++ ++ RE ++L+ + ++
Sbjct: 53 EEKLALKLQVSKNEQTLQDTNAKIASIQKKMSEIKSE-----RELRSLNIEEDIAKERSN 107
Query: 563 QSAVRVREMSGISEKYEKDRKTLLELKSAKERLELEVRGYKLDLESTRRELETNKDQTIE 622
Q+ + + + ++ + +LK LE + +E+ + ++ + +
Sbjct: 108 QANREIEN---LQNEIKRKSEKQEDLKKEMLELEKLALELESLVENEVKNIKETQQIIFK 164
Query: 623 LRAKSKLEKAEGELT 637
+ + +
Sbjct: 165 KKEDLVEKTEPKIYS 179
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein
kinase, transferase; HET: SEP TPO ANP; 2.20A
{Arabidopsis thaliana} PDB: 3tl8_A*
Length = 326
Score = 52.6 bits (127), Expect = 2e-07
Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 22/110 (20%)
Query: 120 AQAVQYLH---GLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDKNG-----RIKSIVP 171
A+ + YLH +HRD+K N+LL + DFG A +D ++
Sbjct: 141 ARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR---- 196
Query: 172 VGTPEYVAPEVLEWMEGNHGSDGY-TGSCDLWSIGVVSYELLTGSTPFNY 220
GT ++APE + S G + D++ GV+ EL+TG F+
Sbjct: 197 -GTIGHIAPE--------YLSTGKSSEKTDVFGYGVMLLELITGQRAFDL 237
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase,
CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo
sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A*
2wb8_A
Length = 336
Score = 51.4 bits (122), Expect = 6e-07
Identities = 39/246 (15%), Positives = 75/246 (30%), Gaps = 59/246 (23%)
Query: 9 QKNVSASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKV-------------------- 48
+ I +G FG+++ H +K +
Sbjct: 14 SHCLPTEKLQRCEKIGEGVFGEVFQTIAD--HTPVAIKIIAIEGPDLVNGSHQKTFEEIL 71
Query: 49 -----------LREKMPNTIERD------IMVKSKCP--------------YIVNLFYSF 77
L ++ N E V+ P N F
Sbjct: 72 PEIIISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDF 131
Query: 78 QDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLH-GLGYVHRDI 136
+ ++ ++E+ GG LE S + A+ +++L ++ L + HRD+
Sbjct: 132 FKDDQLFIVLEFEFGG---IDLEQMRTKLSSLATAKSILHQLTASLAVAEASLRFEHRDL 188
Query: 137 KPDNMLLSATGHLKLTDF--GSATQVDKNGRIKSIVPVGTPEYVAPEVLEWMEGNHGSDG 194
N+LL T KL G ++ + G SI+ ++ + + + D
Sbjct: 189 HWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVFCDVSMDEDL 248
Query: 195 YTGSCD 200
+TG D
Sbjct: 249 FTGDGD 254
>2xs1_A Programmed cell death 6-interacting protein; protein
transport-viral protein complex, cell cycle; 2.30A {Homo
sapiens} PDB: 2xs8_A 2oev_A 2r05_A 2r02_A 2r03_A 2oex_A
2ojq_A
Length = 704
Score = 51.5 bits (122), Expect = 9e-07
Identities = 36/289 (12%), Positives = 81/289 (28%), Gaps = 29/289 (10%)
Query: 362 QLLQQLAEAKASLEDLSCSRTRVLALQAQVSSLQQDLTSHTSLLSKKEEEIDRLRQEMVK 421
Q + + + + + L + ++ L LL ++E + LR + K
Sbjct: 421 QSILTKSRSVIEQGGIQTVDQLIKELPELLQRNREILDESLRLLDEEEATDNDLRAK-FK 479
Query: 422 KESDLVATSSDLVATRHELEEVRSELKEKENLEKTDDRKLEVCEVSKELEVLRGELEEQK 481
+ ++ R E R+ L + + + + +L E
Sbjct: 480 ERWQRTPSNELYKPLRAEGTNFRTVLDKAVQADGQVKECYQ--SHRDTIVLLCKPEPELN 537
Query: 482 TATKQWKKDWYQSVKERNAAVAELKQAQTENEALKEKLTSLEQELKVSEEALATAQNSLD 541
+ + V LK + + +K++ LE +LK + +
Sbjct: 538 ---AAIPSANPAKTMQGSEVVNVLKSLLSNLDEVKKEREGLENDLK-------SVNFDMT 587
Query: 542 SKLREHQALSNTIESMQKEMEQSAVRVREMSGISEKYEKDRKTLLELKSAKERLELEVRG 601
SK A I + + + Y + E +E L ++
Sbjct: 588 SKFLTALAQDGVINEEALSVTE----------LDRVYGGLTTKVQESLKKQEGLLKNIQV 637
Query: 602 YKLDLESTRRELETNKDQTIELRAKSKLEKAEGELTTVREENKKLKQGK 650
+ ++ + + L+ E LK+G
Sbjct: 638 SHQEFSKMKQSNNEANLR------EEVLKNLATAYDNFVELVANLKEGT 680
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor,
microtubles, motor protein; HET: ADP SPM; 2.81A
{Dictyostelium discoideum} PDB: 3vkh_A* 3vkh_C*
Length = 3245
Score = 47.2 bits (112), Expect = 3e-05
Identities = 35/235 (14%), Positives = 75/235 (31%), Gaps = 33/235 (14%)
Query: 401 HTSLLSKKEEEIDRLRQEMVKKES---DLVATSSDLVAT-RHELEEVRSELKEKENLEKT 456
H ++ + R ++ D + L+ R +LEE + L L+K
Sbjct: 1872 HQTIGEANIRLLKRQGRQNYVTPRHYLDFINQVVLLINEKRDQLEEEQLHLNI--GLKKL 1929
Query: 457 DDRKLEVCEVSKELEVLRGELEEQKTAT----KQWKKDWYQSVKERNAAVAELKQAQTEN 512
D + +V ++ L EL+ + KQ +D + ++ A Q N
Sbjct: 1930 RDTEAQVKDLQVSLAQKNRELDVKNEQANQKLKQMVQDQQAAEIKQKDARELQVQLDVRN 1989
Query: 513 E--------------------ALKEKLTSLEQELKVSEEALATAQNSLDSKLREHQALSN 552
+ L+E++ LE + ++ + +
Sbjct: 1990 KEIAVQKVKAYADLEKAEPTGPLREEVEQLENAANELKLKQDEIVATITALEKSIATYKE 2049
Query: 553 TIESMQKEMEQSAVRVREMSGISEKYEKDRKTLLELKSAKERLELEVRGYKLDLE 607
++ +E EQ ++ K ++ L L S + R E + + +
Sbjct: 2050 EYATLIRETEQIKTESSKV---KNKVDRSIALLDNLNSERGRWEQQSENFNTQMS 2101
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM,
protein engineering, structural protein; HET: ADP; 2.80A
{Dictyostelium discoideum} SCOP: k.1.1.1
Length = 1010
Score = 45.0 bits (107), Expect = 1e-04
Identities = 23/181 (12%), Positives = 58/181 (32%), Gaps = 16/181 (8%)
Query: 351 EDMRHWKRDRLQLLQQLAEAKASLEDLSCSRTRVLALQAQVSSLQQDLTSHTSLLSKKEE 410
+ ++ + + + ++ + + L Q +++ L Q + +L K E
Sbjct: 844 PFVAPAGLTPNEIDSTWSALEKAEQEHAEALRIELKRQKKIAVLLQ---KYNRILKKLEN 900
Query: 411 EIDRLRQEMVKKESDLVATSSDLVATRHELEEVRSELKEKENLEKTDDRKLEVCEVSKEL 470
+ E + + + A LE E + E +D + ++++
Sbjct: 901 WATTKSVYLGSNE--TGDSITAVQAKLKNLEAFDGECQSLEGQSNSDLLSILA-QLTELN 957
Query: 471 EVLRGELEEQKTATKQWKKDWYQSVKERNAAVAELKQAQTENEALKEKLTSLEQELKVSE 530
EL E+K ++ + + + A E+L +E +L
Sbjct: 958 YNGVPELTERKDTFFA---------QQWTGVKSSAETYKNTLLAELERLQKIE-DLHHHH 1007
Query: 531 E 531
Sbjct: 1008 H 1008
Score = 42.7 bits (101), Expect = 6e-04
Identities = 22/162 (13%), Positives = 51/162 (31%), Gaps = 15/162 (9%)
Query: 351 EDMRHWKRDRLQLLQQLAEAKASLEDLSCSRTRVLALQAQVSSLQQDLTSHTSLLSKKEE 410
E + L++ + + A L + L A S+ ++ +
Sbjct: 864 EKAEQEHAEALRIELKRQKKIAVLLQKYNRILKKLENWATTKSVYLGSNETGDSITAVQA 923
Query: 411 EIDRLRQEMVKKESDLVATSSDLVATRHELEEVRSELKEKENLEKTDDRKLEVCEVSKEL 470
++ L + +S ++SDL++ +L E+ E E+ D +++
Sbjct: 924 KLKNLEAFDGECQSLEGQSNSDLLSILAQLTELNYN-GVPELTERKDTFF------AQQW 976
Query: 471 EVLRGELEEQKTATKQWKKDWYQSVKERNAAVAELKQAQTEN 512
++ E K ER + +L +
Sbjct: 977 TGVKSSAETYKNTLLAEL--------ERLQKIEDLHHHHHHH 1010
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A
{Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Length = 995
Score = 41.6 bits (98), Expect = 0.001
Identities = 21/171 (12%), Positives = 52/171 (30%), Gaps = 11/171 (6%)
Query: 353 MRHWKRDRLQLLQQLAEAKASLEDLSCSRTRVLALQAQVSSLQQDLTSHTSLLSKKEEEI 412
+ ++ ++LE L ++ + L + + KK E
Sbjct: 834 REPFVAPAGLTPNEIDSTWSALEKAEQEHAEALRIELKRQKKIAVLLQKYNRILKKLENW 893
Query: 413 DRLRQEMVKKESDLVATSSDLVATRHELEEVRSELKEKENLEKTDDRKLEVCEVSKELEV 472
+ + + + + + A LE E + E +D + ++++
Sbjct: 894 ATTKSVYLGSN-ETGDSITAVQAKLKNLEAFDGECQSLEGQSNSDLLSILA-QLTELNYN 951
Query: 473 LRGELEEQKTATKQWKKDWYQSVKERNAAVAELKQAQTENEALKEKLTSLE 523
EL E+K ++ + + + A E+L +E
Sbjct: 952 GVPELTERKDTFFA---------QQWTGVKSSAETYKNTLLAELERLQKIE 993
>1hci_A Alpha-actinin 2; triple-helix coiled coil, contractIle protein,
muscle, Z- LINE, actin-binding protein; 2.8A {Homo
sapiens} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 a.7.1.1
Length = 476
Score = 40.6 bits (94), Expect = 0.002
Identities = 52/410 (12%), Positives = 140/410 (34%), Gaps = 15/410 (3%)
Query: 388 QAQVSSLQQDLTSHTSLLSKKEEE--IDRLRQEMVKKESDLVATSSDLVATRHELEEVRS 445
+ S L + + L + E + +++++ V + +LE +
Sbjct: 17 ERLASELLEWIRRTIPWLENRTPEKTMQAMQKKLEDFRDYRRKHKPPKVQEKCQLEINFN 76
Query: 446 ELKEKENLEKTDDRKLEVCEVSKELEVLRGELEEQKTATKQWKKDWYQSVKERNAAVAEL 505
L+ K + ++ ++ LE+ + ++W + + ++
Sbjct: 77 TLQTKLRISNRPAFMPSEGKMVSDIAGAWQRLEQAEKGYEEWLLNEIRRLERLEHL---A 133
Query: 506 KQAQTENEALKEKLTSLEQELKVSEEALATAQNSLDSKLREHQALSNTIESMQKEMEQSA 565
++ + + + EQ L ++ + + + + LR+H+A + + + Q +EQ A
Sbjct: 134 EKFRQKASTHETWAYGKEQILL-QKDYESASLTEVRALLRKHEAFESDLAAHQDRVEQIA 192
Query: 566 VRVREM-SGISEKYEKDRKTLLELKSAKERLELEVRGYKLDLESTRRELETNKDQTIELR 624
+E+ ++ +RL + + LE + LET +E
Sbjct: 193 AIAQELNELDYHDAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKLLETIDQLHLEFA 252
Query: 625 AKSK-----LEKAEGELTTVREENKKLKQGKIRLVYSLFKDPQPAQSKLEKAEGELTTVR 679
++ +E A +L + + + + + FK P ++ +
Sbjct: 253 KRAAPFNNWMEGAMEDLQDMFIVHSIEEIQSLITAHEQFKATLPEADGERQSIMAIQ--N 310
Query: 680 EENKKLKVSFFFTLESNSLFWLDPNTFLSSLEDLKSNYTERESKLRSANEIIGEYETKIT 739
E K ++ SN + + + + +K R+ L+ E
Sbjct: 311 EVEKVIQSYNIRISSSNPYSTVTMDELRTKWDKVKQLVPIRDQSLQEELARQHANERLRR 370
Query: 740 ALESTMTRSESYCKEMVEYL-ETLQKNNDILSHDNEQLRKKNNDILSHDN 788
+ + + +E + + + L QL++ ++I+++ N
Sbjct: 371 QFAAQANAIGPWIQNKMEEIARSSIQITGALEDQMNQLKQYEHNIINYKN 420
Score = 36.4 bits (83), Expect = 0.034
Identities = 32/333 (9%), Positives = 96/333 (28%), Gaps = 8/333 (2%)
Query: 466 VSKELEVLRGELEEQKTATKQWKKDWYQSVKERNAA--VAELKQAQTENEALKEKLTSLE 523
V++E E L E E + +W + ++ R + +++ + + K +
Sbjct: 5 VNQENERLMEEYERLASELLEWIRRTIPWLENRTPEKTMQAMQKKLEDFRDYRRKHKPPK 64
Query: 524 QELKVSEEALATAQNSLDSKLREHQALSNTIESMQKEMEQSAVRVREMSGISEKYEKDRK 583
+ K E + + + + + + G E + +
Sbjct: 65 VQEKCQLEINFNTLQTKLRISNRPAFMPSEGKMVSDIAGAWQRLEQAEKGYEEWLLNEIR 124
Query: 584 TLLELKSAKERLELEVRGYKLDLESTRRELETNKDQTIEL----RAKSKLEKAEGELTTV 639
L L+ E+ + ++ + L ++ L K E E +L
Sbjct: 125 RLERLEHLAEKFRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLAAH 184
Query: 640 REENKKLKQGKIRLVYSLFKDPQPAQSKLEKAEGELTTVREENKKLKVSFFFTLESNSLF 699
++ +++ L + D + +K + + +K + + +
Sbjct: 185 QDRVEQIAAIAQELNELDYHDAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKLLETI 244
Query: 700 WLDPNTFLSSLEDLKSNYTERESKLRSANEIIGEYETKITALESTMTRSESYCKEMVEYL 759
F + L+ I +I +L + + ++ E
Sbjct: 245 DQLHLEFAKRAAPFNNWMEGAMEDLQDMF--IVHSIEEIQSLITAHEQFKATLPEADGER 302
Query: 760 ETLQKNNDILSHDNEQLRKKNNDILSHDNEQLR 792
+++ + + + + + + +
Sbjct: 303 QSIMAIQNEVEKVIQSYNIRISSSNPYSTVTMD 335
>2dq3_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics,
NPPSFA, nationa on protein structural and functional
analyses; HET: SSA; 3.00A {Aquifex aeolicus}
Length = 425
Score = 39.8 bits (94), Expect = 0.003
Identities = 23/117 (19%), Positives = 48/117 (41%), Gaps = 21/117 (17%)
Query: 432 DLVATRHELEEVRSELKEK-ENLEKTDDRKLEVCEVSKELEVLRGELEEQKTATKQWKKD 490
D+ R + + V+ L + + L D+ LE+ + +E+ LE +
Sbjct: 3 DINLIREKPDYVKERLATRDKELVSLVDKVLELDKRRREIIK---RLEALR--------- 50
Query: 491 WYQSVKERNAA---VAELKQAQTENEALKEKLTSLEQELKVSEEALATAQNSLDSKL 544
ERN + +LK+ + ++ ++ L++E+ EE L + L + L
Sbjct: 51 -----SERNKLSKEIGKLKREGKDTTEIQNRVKELKEEIDRLEEELRKVEEELKNTL 102
>1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP
hydrolysis, GDP, GMP, dynamin related, large GTPase
family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens}
SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A*
2bc9_A* 2d4h_A*
Length = 592
Score = 39.9 bits (92), Expect = 0.003
Identities = 19/158 (12%), Positives = 52/158 (32%), Gaps = 1/158 (0%)
Query: 408 KEEEIDRLRQEMVKKESDLVATSSDLVATRHELEEVRSELKEKENLEKTDDRKLEVCEVS 467
K Q++ + + L+ + + D+ L E
Sbjct: 429 KPGGYRLFVQKLQDLKKKYYEEPRKGIQAEEILQTYLKSKESMTDAILQTDQTLTEKEKE 488
Query: 468 KELEVLRGELEEQKTATKQWKKDWYQSVKERNAAVAELKQAQTENEALKEKLTSLEQELK 527
E+E ++ E + + + + E+ + Q + +++ L+++ +
Sbjct: 489 IEVERVKAESAQASAKMLHEMQRKNEQMMEQKERSYQEHLKQLTEKMENDRVQLLKEQER 548
Query: 528 VSEEALATAQNSLDSKL-REHQALSNTIESMQKEMEQS 564
L + L +E + + N I+ +Q +M +
Sbjct: 549 TLALKLQEQEQLLKEGFQKESRIMKNEIQDLQTKMRRR 586
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin
binding, masking, regulation, SELF-inhibition, cell A
membrane protein; 2.10A {Spodoptera frugiperda} PDB:
2i1k_A 1e5w_A
Length = 575
Score = 39.5 bits (91), Expect = 0.004
Identities = 36/264 (13%), Positives = 85/264 (32%), Gaps = 10/264 (3%)
Query: 388 QAQVSSLQQDLTSHTSLLSKKEEEIDRLRQEMVKKESDLVATSSDLVATRHELEEVRSEL 447
V ++ + E++ + E L + E+E ++ L
Sbjct: 299 TIDVQQMKAQAREEKLAKQAQREKLQLEIAARERAEKKQQEYQDRLRQMQEEMERSQANL 358
Query: 448 KEKENL-EKTDDRKLEVCEVSKELEVLRGELEEQKTATKQWKKDWYQSVKERNAAVAELK 506
E +++ + +++ ++ +ELE + EL+ ++ K ER E++
Sbjct: 359 LEAQDMILRLEEQLRQLQAAKEELEQRQNELQAMMQRLEETKN---MEAAERQKLEDEIR 415
Query: 507 QAQTENEALKEKLTSLEQELKVSEEALATAQNSLDSKLREHQALSNTIESMQKEMEQSAV 566
Q E +++++ + E + +E + A+ D A + E++
Sbjct: 416 AKQEEVSRIQQEVELKDSETRRLQEEVEDARRKQDEAAAALLAATTPQH--HHVAERADT 473
Query: 567 RVREMSGISEKYEKDRKTLLELKSAKERLELEVRGYKLDLESTRRELETNKDQTIELRAK 626
+ E L + R E +L+ K +
Sbjct: 474 DPDHDNASDAGSESGGGDLARGPDDLVDPVADRRTLAERNERLHNQLKALKQDLARSCDE 533
Query: 627 SKLEKAEGELTTVREENKKLKQGK 650
+K E + + EN + + K
Sbjct: 534 TK----ETAMDKIHRENVRQGRDK 553
>2dq0_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; HET: SSA; 2.60A {Pyrococcus
horikoshii} PDB: 2dq1_A* 2dq2_A 2zr2_A* 2zr3_A
Length = 455
Score = 38.7 bits (91), Expect = 0.006
Identities = 19/119 (15%), Positives = 41/119 (34%), Gaps = 24/119 (20%)
Query: 432 DLVATRHELEEVRSELK---EKENLEKTDDRKLEVCEVSKELEVLRGELEEQKTATKQWK 488
D+ R E V+++L E E ++ D E+ ++ E E+ +
Sbjct: 3 DIKLIRENPELVKNDLIKRGELEKVKWVD----EILKLDTEWRTKLKEINRLR------- 51
Query: 489 KDWYQSVKERNAA---VAELKQAQTENEALKEKLTSLEQELKVSEEALATAQNSLDSKL 544
ERN + + ++ + L K + + + E + + +D L
Sbjct: 52 -------HERNKIAVEIGKRRKKGEPVDELLAKSREIVKRIGELENEVEELKKKIDYYL 103
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein,
nuclear protein, neurogenesis, cytosk LIS1 binding,
differentiation; 2.24A {Rattus norvegicus}
Length = 189
Score = 37.0 bits (85), Expect = 0.010
Identities = 36/186 (19%), Positives = 61/186 (32%), Gaps = 4/186 (2%)
Query: 504 ELKQAQTENEALKEKLTSLEQELKVSEEALATAQNSLDSKLREHQALSNTIESMQKEMEQ 563
+ + E KE +Q + + + L Q E +A E ++++
Sbjct: 4 DFSSLKEETAYWKELSMKYKQSFQEARDELVEFQEGSRELEAELEAQLVQAEQRNRDLQA 63
Query: 564 SAVRVR-EMSGISEKYEKDRKTLLELKSAKERLELEVRGYKLDLESTRRELETNKD--QT 620
R++ E+ + EK E + S E + R K L RELE D +
Sbjct: 64 DNQRLKYEVEALKEKLEHQYAQSYKQVSVLEDDLSQTRAIKEQLHKYVRELEQANDDLER 123
Query: 621 IELRAKSKLEKAEGELTTVREENKKLKQGKIRLVYSLFKDPQPAQSKLEKAEGELTTVRE 680
+ LE E L E N L+ SL Q + + EL
Sbjct: 124 AKRATIMSLEDFEQRLNQAIERNAFLESELDEKE-SLLVSVQRLKDEARDLRQELAVRER 182
Query: 681 ENKKLK 686
+ + +
Sbjct: 183 QQEVTR 188
Score = 36.6 bits (84), Expect = 0.013
Identities = 30/179 (16%), Positives = 65/179 (36%), Gaps = 8/179 (4%)
Query: 454 EKTDDRKLEVCEVSKELEVLRGELEEQKTATKQWKKDWYQSVKERNAAVAELK----QAQ 509
E+T K + + + R EL E + +++ + + + + +L+ + +
Sbjct: 10 EETAYWKELSMKYKQSFQEARDELVEFQEGSRELEAELEAQLVQAEQRNRDLQADNQRLK 69
Query: 510 TENEALKEKLTSLEQELKVSEEALATAQNSLDSKLREHQALSNTIESMQKEMEQSA---- 565
E EALKEKL + L + + + +E ++E++
Sbjct: 70 YEVEALKEKLEHQYAQSYKQVSVLEDDLSQTRAIKEQLHKYVRELEQANDDLERAKRATI 129
Query: 566 VRVREMSGISEKYEKDRKTLLELKSAKERLELEVRGYKLDLESTRRELETNKDQTIELR 624
+ + + + + L KE L + V+ K + R+EL + Q R
Sbjct: 130 MSLEDFEQRLNQAIERNAFLESELDEKESLLVSVQRLKDEARDLRQELAVRERQQEVTR 188
Score = 35.9 bits (82), Expect = 0.023
Identities = 28/188 (14%), Positives = 65/188 (34%), Gaps = 6/188 (3%)
Query: 467 SKELEVLRGELEEQKTATKQWKKDWYQSVKERNAAVAELKQAQTENEALKEKLTSLEQEL 526
+ + L+ E K + ++K+ + ++ E ++ + E EA + ++L
Sbjct: 2 AMDFSSLKEETAYWKELSMKYKQSFQEARDELVEFQEGSRELEAELEAQLVQAEQRNRDL 61
Query: 527 KVSEEALATAQNSLDSKLREHQALSN-TIESMQKEMEQSAVRVREMSGISEKYEKDRKTL 585
+ + L +L KL A S + ++ ++ Q+ ++ + E+ L
Sbjct: 62 QADNQRLKYEVEALKEKLEHQYAQSYKQVSVLEDDLSQTRAIKEQLHKYVRELEQANDDL 121
Query: 586 LELKSAKERLELEVRGYKLDLESTRRELETNKDQTIEL-----RAKSKLEKAEGELTTVR 640
K A + LE+ D+ L R K + EL
Sbjct: 122 ERAKRATIMSLEDFEQRLNQAIERNAFLESELDEKESLLVSVQRLKDEARDLRQELAVRE 181
Query: 641 EENKKLKQ 648
+ + ++
Sbjct: 182 RQQEVTRK 189
Score = 33.2 bits (75), Expect = 0.19
Identities = 29/188 (15%), Positives = 67/188 (35%), Gaps = 8/188 (4%)
Query: 375 EDLSCSRTRVLALQAQVSSLQQDLTSHTSLLSKKEEEIDRLRQEMVKKESDLVATSSDLV 434
E+ + + + + + +L + E E++ + ++ DL A + L
Sbjct: 10 EETAYWKELSMKYKQSFQEARDELVEFQEGSRELEAELEAQLVQAEQRNRDLQADNQRL- 68
Query: 435 ATRHELEEVRSELKEKENLEKTDDRKLEVCEVSKELEVLRGELEEQKTATKQWKKDWYQS 494
++E+E ++ +L+ + LE +L R E+ ++ ++
Sbjct: 69 --KYEVEALKEKLEHQYAQSYKQVSVLE-----DDLSQTRAIKEQLHKYVRELEQANDDL 121
Query: 495 VKERNAAVAELKQAQTENEALKEKLTSLEQELKVSEEALATAQNSLDSKLREHQALSNTI 554
+ + A + L+ + E+ LE EL E L + Q D Q L+
Sbjct: 122 ERAKRATIMSLEDFEQRLNQAIERNAFLESELDEKESLLVSVQRLKDEARDLRQELAVRE 181
Query: 555 ESMQKEME 562
+ +
Sbjct: 182 RQQEVTRK 189
Score = 32.0 bits (72), Expect = 0.49
Identities = 35/186 (18%), Positives = 71/186 (38%), Gaps = 8/186 (4%)
Query: 390 QVSSLQQDLTSHTSLLSKKEEEIDRLRQEMVKKESDLVATSSDLVATRHELEEVRSELKE 449
SSL+++ L K ++ R E+V+ + ++L A + E+ +L+
Sbjct: 4 DFSSLKEETAYWKELSMKYKQSFQEARDELVEFQEGSRELEAELEAQLVQAEQRNRDLQA 63
Query: 450 KENLEKTDDRKL--EVCEVSKELEVLRGELEEQKTATKQWKKDWYQSVKERNAAVAELKQ 507
K + L ++ + LE+ + T+ K+ ++ V+E A +L
Sbjct: 64 DNQRLKYEVEALKEKLEHQYAQSYKQVSVLEDDLSQTRAIKEQLHKYVRELEQANDDL-- 121
Query: 508 AQTENEALKEKLTSLEQELKVSEEALATAQNSLDSKLR---EHQALSNTIESMQKEMEQS 564
+ A L EQ L + E A ++ LD K Q L + +++E+
Sbjct: 122 -ERAKRATIMSLEDFEQRLNQAIERNAFLESELDEKESLLVSVQRLKDEARDLRQELAVR 180
Query: 565 AVRVRE 570
+
Sbjct: 181 ERQQEV 186
Score = 28.9 bits (64), Expect = 4.4
Identities = 29/130 (22%), Positives = 50/130 (38%), Gaps = 2/130 (1%)
Query: 354 RHWKRDRLQLLQQLAEAKASLEDL-SCSRTRVLALQAQVSSLQQDLTSHTSLLSKKEEEI 412
R + D +L ++ K LE + S +V L+ +S + + + E+
Sbjct: 59 RDLQADNQRLKYEVEALKEKLEHQYAQSYKQVSVLEDDLSQTRAIKEQLHKYVRELEQAN 118
Query: 413 DRLRQEMVKKESDLVATSSDLVATRHELEEVRSELKEKENLEKTDDR-KLEVCEVSKELE 471
D L + L L + SEL EKE+L + R K E ++ +EL
Sbjct: 119 DDLERAKRATIMSLEDFEQRLNQAIERNAFLESELDEKESLLVSVQRLKDEARDLRQELA 178
Query: 472 VLRGELEEQK 481
V + E +
Sbjct: 179 VRERQQEVTR 188
>2zuo_A MVP, major vault protein; repeat domains, protein-protein complex,
cytoplasm, ribonucleoprotein, structural protein; 3.50A
{Rattus norvegicus} PDB: 2zv4_N 2zv5_a 2qzv_A
Length = 861
Score = 38.3 bits (88), Expect = 0.011
Identities = 31/194 (15%), Positives = 66/194 (34%), Gaps = 12/194 (6%)
Query: 349 SSEDMRHWKRDRLQLLQQLAE--AKASLEDLSCSRTRVLALQAQVSSLQQDLTSHTSLLS 406
S E + RD LQ QLA S E + + L +A+ +Q +
Sbjct: 642 SVEPVDQRTRDALQRSVQLAIEITTNSQEAAAKHEAQRLEQEARGRLERQKI-------- 693
Query: 407 KKEEEIDRLRQEMVKKESDLVATSSDLVATRHELEEVRSELKEKENLEKTDDRKLEVCEV 466
+ E ++ R+E+++ E+ +A S A + E E K + +
Sbjct: 694 LDQSEAEKARKELLELEAMSMAVESTGNAKAEAESRAEAARIEGEGSVLQAKLKAQALAI 753
Query: 467 SKELEVLRGELEEQKTATKQWKKDWYQSVKERNAAVAELKQAQTENEALKEKLTSLEQEL 526
E E+ R +++ + + + + + +A ++ + + ++
Sbjct: 754 ETEAELER--VKKVREMELIYARAQLELEVSKAQQLANVEAKKFKEMTEALGPGTIRDLA 811
Query: 527 KVSEEALATAQNSL 540
E SL
Sbjct: 812 VAGPEMQVKLLQSL 825
Score = 35.6 bits (81), Expect = 0.084
Identities = 27/193 (13%), Positives = 68/193 (35%), Gaps = 2/193 (1%)
Query: 494 SVKERNAAVAELKQAQTENEALKEKLTSLEQELKVSEEALATAQNSLDSKLREHQALSNT 553
+ + + A + + + E L + + QN L + Q++
Sbjct: 587 TFDDFHKNSARIIRMAVFGFEMSEDTGPDGTLLPKARDQAVFPQNGLVVSSVDVQSVEPV 646
Query: 554 IESMQKEMEQSAVRVREMSGISEKYEKDRKTLLELKSAKERLELEVRGYKLDLESTRREL 613
+ + +++S E++ S++ + + A+ RLE + + + E R+EL
Sbjct: 647 DQRTRDALQRSVQLAIEITTNSQEAAAKHEAQRLEQEARGRLERQKILDQSEAEKARKEL 706
Query: 614 ETNKDQTIELRA--KSKLEKAEGELTTVREENKKLKQGKIRLVYSLFKDPQPAQSKLEKA 671
+ ++ + + +K E E + Q K++ + + +
Sbjct: 707 LELEAMSMAVESTGNAKAEAESRAEAARIEGEGSVLQAKLKAQALAIETEAELERVKKVR 766
Query: 672 EGELTTVREENKK 684
E EL R + +
Sbjct: 767 EMELIYARAQLEL 779
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 36.5 bits (83), Expect = 0.012
Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 6/35 (17%)
Query: 298 KKDKRKASPSLKAFQKEGRYLDSALPLIGISYTGE 332
K+ +K SLK + DSA P + I T E
Sbjct: 19 KQALKKLQASLKLYAD-----DSA-PALAIKATME 47
Score = 34.2 bits (77), Expect = 0.059
Identities = 13/49 (26%), Positives = 19/49 (38%), Gaps = 23/49 (46%)
Query: 511 ENEALKEKLTSLEQELKV----SEEALATAQNSLDSKLREHQALSNTIE 555
E +ALK+ L+ LK+ S AL A+ T+E
Sbjct: 18 EKQALKK----LQASLKLYADDSAPAL---------------AIKATME 47
Score = 31.1 bits (69), Expect = 0.84
Identities = 11/47 (23%), Positives = 17/47 (36%), Gaps = 21/47 (44%)
Query: 626 KSKLEKAEGELTTVREENKKLKQGKIRLVYSLFKDPQPA---QSKLE 669
K L+K + L KL Y+ D PA ++ +E
Sbjct: 19 KQALKKLQASL--------KL--------YA--DDSAPALAIKATME 47
Score = 30.3 bits (67), Expect = 1.5
Identities = 10/29 (34%), Positives = 12/29 (41%), Gaps = 10/29 (34%)
Query: 256 QSLVQKLDARLNMDQVLGHPVFDCLDSDP 284
Q+L +KL A L L DS P
Sbjct: 20 QAL-KKLQASLK----LYAD-----DSAP 38
Score = 29.1 bits (64), Expect = 2.9
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 365 QQLAEAKASLEDLSCSRTRVLALQAQV 391
Q L + +ASL+ + LA++A +
Sbjct: 20 QALKKLQASLKLYADDSAPALAIKATM 46
Score = 28.8 bits (63), Expect = 3.8
Identities = 10/48 (20%), Positives = 20/48 (41%), Gaps = 18/48 (37%)
Query: 546 EHQALSNTIESMQKEMEQSAVRVREMSGISEKYEKDRKTLLELKSAKE 593
E QAL K+++ +++++ Y D L +K+ E
Sbjct: 18 EKQAL--------KKLQ-ASLKL---------YADDSAPALAIKATME 47
>3fpp_A Macrolide-specific efflux protein MACA; hexameric assembly,
membrane fusion protein, drug efflux pump, periplasmic
protein; 2.99A {Escherichia coli}
Length = 341
Score = 37.3 bits (87), Expect = 0.014
Identities = 20/90 (22%), Positives = 45/90 (50%), Gaps = 5/90 (5%)
Query: 457 DDRKLE--VCEVSKELEVLRGELEEQKTATKQWKKDW--YQSVKERNA-AVAELKQAQTE 511
D + E + EV L LR + ++ + K + + Q + + A + +L A TE
Sbjct: 63 DPEQAENQIKEVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNAATE 122
Query: 512 NEALKEKLTSLEQELKVSEEALATAQNSLD 541
+ ++ +++ ++K ++ +L TA+ +LD
Sbjct: 123 MAVKQAQIGTIDAQIKRNQASLDTAKTNLD 152
>2b9c_A Striated-muscle alpha tropomyosin; alpha-helix, coiled coil,
alanine, axial stagger, radius, SIDE-chain packing,
crystal packing; 2.30A {Rattus norvegicus} SCOP: h.1.5.1
Length = 147
Score = 36.2 bits (83), Expect = 0.014
Identities = 26/147 (17%), Positives = 65/147 (44%), Gaps = 2/147 (1%)
Query: 387 LQAQVSSLQQDLTSHTSLLSKKEEEIDRLRQEMVKKESDLVATSSDLVATRHELEEVRSE 446
+ ++ ++++L L+ ++++ + + E + S ++E +
Sbjct: 1 MNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQ 60
Query: 447 LKEKENLEKTDDRKLEVCEVSKELEVLRGELEEQKTATKQWKKDWYQSVKERNAAVAELK 506
LKE +++ + DRK E EV+++L ++ +LE + + + + +E LK
Sbjct: 61 LKEAKHIAEDADRKYE--EVARKLVIIESDLERAEERAELSEGKCAELEEELKTVTNNLK 118
Query: 507 QAQTENEALKEKLTSLEQELKVSEEAL 533
+ + E L K LE E+ ++ +
Sbjct: 119 SLEDKVEELLSKNYHLENEVARLKKLV 145
Score = 34.7 bits (79), Expect = 0.037
Identities = 28/149 (18%), Positives = 67/149 (44%), Gaps = 2/149 (1%)
Query: 415 LRQEMVKKESDLVATSSDLVATRHELEEVRSELKEKENLEKTDDRKLEVCEVSKELEVLR 474
+ + + E +L L +LEE E E K + + + E +++E+
Sbjct: 1 MNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDE--EKMEIQE 58
Query: 475 GELEEQKTATKQWKKDWYQSVKERNAAVAELKQAQTENEALKEKLTSLEQELKVSEEALA 534
+L+E K + + + + ++ ++L++A+ E + K LE+ELK L
Sbjct: 59 IQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEELKTVTNNLK 118
Query: 535 TAQNSLDSKLREHQALSNTIESMQKEMEQ 563
+ ++ ++ L ++ L N + ++K + +
Sbjct: 119 SLEDKVEELLSKNYHLENEVARLKKLVGE 147
Score = 30.0 bits (67), Expect = 1.6
Identities = 20/149 (13%), Positives = 62/149 (41%), Gaps = 3/149 (2%)
Query: 466 VSKELEVLRGELEEQKTATKQWKKDWYQSVKERNAAVAELKQAQTENEALKEKLTSLEQE 525
+++ ++++ EL+ + + ++ K + + +K ++ + +EK+ E +
Sbjct: 1 MNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQ 60
Query: 526 LKVSEEALATAQNSLDSKLREHQALSNTIESMQKEMEQSAVRVREMSGISEKYEKDRKTL 585
LK ++ A + R+ + + +E ++ E S + E+ E+ + L
Sbjct: 61 LKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAEL---EEELKTVTNNL 117
Query: 586 LELKSAKERLELEVRGYKLDLESTRRELE 614
L+ E L + + ++ ++ +
Sbjct: 118 KSLEDKVEELLSKNYHLENEVARLKKLVG 146
>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic
vesicle, membrane, Ca structural protein; 7.94A {Bos
taurus}
Length = 190
Score = 36.7 bits (84), Expect = 0.015
Identities = 22/116 (18%), Positives = 37/116 (31%), Gaps = 38/116 (32%)
Query: 411 EIDRLRQEMVKKESDLVATSSDLVATRHELEEVRSELKEKENLEKTDDRKLEVCEVSKEL 470
+ DRL QE ES R EE R L+E + K +
Sbjct: 76 QADRLTQE---PES-----------IRKWREEQRKRLQELDAASK---VMEQ-------- 110
Query: 471 EVLRGELEEQKTATKQWKKDWYQSVKERNAAVAELKQAQTENEALKEKLTSLEQEL 526
E E+ A K ++W + ++ V + K + K + ++
Sbjct: 111 -----EWREK--AKKDL-EEWN---QRQSEQVEKNKINNRIAD--KAFYQQPDADI 153
Score = 34.4 bits (78), Expect = 0.083
Identities = 13/90 (14%), Positives = 34/90 (37%), Gaps = 21/90 (23%)
Query: 502 VAELKQAQTENEALKE-------KLTSLEQELKVSEEAL-ATAQNSLDSKLREHQALSNT 553
+A+ + E E++++ +L L+ KV E+ A+ L+ +
Sbjct: 74 IAQADRLTQEPESIRKWREEQRKRLQELDAASKVMEQEWREKAKKDLEEWNQRQS----- 128
Query: 554 IESMQKEMEQSAVRVREMSGISEKYEKDRK 583
E ++K + R+ + + + +
Sbjct: 129 -EQVEKNKINN--RIAD-----KAFYQQPD 150
Score = 33.6 bits (76), Expect = 0.15
Identities = 9/74 (12%), Positives = 37/74 (50%), Gaps = 11/74 (14%)
Query: 476 ELEEQKTATKQWKKDWYQSVKERNAAVAELKQAQTENEALK----------EKLTSLEQE 525
L ++ + ++W+++ + ++E +AA +++ + + +A K E++ +
Sbjct: 79 RLTQEPESIRKWREEQRKRLQELDAA-SKVMEQEWREKAKKDLEEWNQRQSEQVEKNKIN 137
Query: 526 LKVSEEALATAQNS 539
+++++A ++
Sbjct: 138 NRIADKAFYQQPDA 151
Score = 31.7 bits (71), Expect = 0.61
Identities = 13/86 (15%), Positives = 34/86 (39%), Gaps = 16/86 (18%)
Query: 350 SEDMRHWKRDRLQLLQQLAEAKASLEDLSCSRTRVLALQAQVSSLQQDLTSHTSLLSKKE 409
E +R W+ ++ + LQ+L A +E +A ++DL ++
Sbjct: 84 PESIRKWREEQRKRLQELDAASKVMEQ-------EWREKA-----KKDL---EEWNQRQS 128
Query: 410 EEIDRLRQEMVKKESDLVA-TSSDLV 434
E++++ + + +D++
Sbjct: 129 EQVEKNKINNRIADKAFYQQPDADII 154
Score = 30.9 bits (69), Expect = 1.1
Identities = 14/91 (15%), Positives = 29/91 (31%), Gaps = 25/91 (27%)
Query: 555 ESMQKEMEQSAVRVREMSGISEKYEKDRKTLLELKSAKERLELEVRGYKLDLESTRRELE 614
ES++K E+ R + E + E + E +++LE
Sbjct: 85 ESIRKWREEQRKR------LQELDAASKVMEQEWR-----------------EKAKKDLE 121
Query: 615 TNKDQTIELRAKSKLE--KAEGELTTVREEN 643
+ E K+K+ A+ + +
Sbjct: 122 EWNQRQSEQVEKNKINNRIADKAFYQQPDAD 152
Score = 27.8 bits (61), Expect = 9.6
Identities = 11/59 (18%), Positives = 23/59 (38%), Gaps = 12/59 (20%)
Query: 407 KKEEEIDRLRQEMVKKESDLVATSSDLVATRHELEE---VRSELKEKENLEKTDDRKLE 462
++ + + L E + + + +LEE +SE EK K ++R +
Sbjct: 93 EQRKRLQELDAASKVMEQEWREKA------KKDLEEWNQRQSEQVEK---NKINNRIAD 142
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase;
endopeptidase activity, protein kinase activity; HET:
TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A*
2vwb_A*
Length = 540
Score = 37.7 bits (88), Expect = 0.016
Identities = 16/77 (20%), Positives = 31/77 (40%), Gaps = 12/77 (15%)
Query: 79 DMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKP 138
D+++ +M Y+ G ++E+ Y++ + V LH +H D+
Sbjct: 410 DLDNKRIMMSYINGKLAKDVIEDNLD----------IAYKIGEIVGKLHKNDVIHNDLTT 459
Query: 139 DNMLLSATGHLKLTDFG 155
N + L + DFG
Sbjct: 460 SNFIFD--KDLYIIDFG 474
>2qag_B Septin-6, protein NEDD5; cell cycle, cell division, GTP-binding,
nucleotide-binding, phosphorylation, acetylation,
alternative splicing, coiled coil; HET: GDP GTP; 4.00A
{Homo sapiens}
Length = 427
Score = 37.0 bits (85), Expect = 0.019
Identities = 23/135 (17%), Positives = 57/135 (42%), Gaps = 8/135 (5%)
Query: 516 KEKLTSLEQELKVSEEALATAQNSLDSKLREHQALSNTIESMQKEMEQSAVRVREMSGIS 575
+ KL + + + + Q + ++K E ++ ++EM Q + +
Sbjct: 300 RCKLEEMGFKDTDPDSKPFSLQETYEAKRNEFLGE---LQKKEEEMRQ-----MFVQRVK 351
Query: 576 EKYEKDRKTLLELKSAKERLELEVRGYKLDLESTRRELETNKDQTIELRAKSKLEKAEGE 635
EK + ++ EL +RL+ + K LE ++ L+ + + + ++L +++G
Sbjct: 352 EKEAELKEAEKELHEKFDRLKKLHQDEKKKLEDKKKSLDDEVNAFKQRKTAAELLQSQGS 411
Query: 636 LTTVREENKKLKQGK 650
+ K+ K+ K
Sbjct: 412 QAGGSQTLKRDKEKK 426
Score = 31.3 bits (70), Expect = 1.3
Identities = 24/100 (24%), Positives = 40/100 (40%), Gaps = 18/100 (18%)
Query: 392 SSLQQDLTSHTSLLSKKEEEIDRLRQEMVKKESDLVATSSDLVATRHELEEVRSELKEKE 451
+ + L KKEEE+ ++ + VK++ ++L EL E LK+
Sbjct: 322 ETYEAKRNEFLGELQKKEEEMRQMFVQRVKEKE------AELKEAEKELHEKFDRLKKLH 375
Query: 452 NLEKTDDRKLEVCEVSKELEVLRGELEEQKTATKQWKKDW 491
EK K+LE + L+++ A KQ K
Sbjct: 376 QDEK------------KKLEDKKKSLDDEVNAFKQRKTAA 403
>1ses_A Seryl-tRNA synthetase; ligase; HET: AHX AMP; 2.50A {Thermus
thermophilus} SCOP: a.2.7.1 d.104.1.1 PDB: 1ser_A*
1set_A* 1sry_A
Length = 421
Score = 37.1 bits (87), Expect = 0.022
Identities = 30/116 (25%), Positives = 48/116 (41%), Gaps = 19/116 (16%)
Query: 432 DLVATRHELEEVRSELKEKENLEKTDDRKLEVCEVSKELEVLRGELEEQKTATKQWKKDW 491
DL R E E ++EK + + L + +EL+ L+E +T
Sbjct: 3 DLKRLRQEPEVFHRAIREK-GVALDLEALLALDREVQELKK---RLQEVQT--------- 49
Query: 492 YQSVKERNAAVAELKQAQTEN-EALKEKLTSLEQELKVSEEALATAQNSLDSKLRE 546
ERN + +A E EAL + +L +E K EEAL + L++ L +
Sbjct: 50 -----ERNQVAKRVPKAPPEEKEALIARGKALGEEAKRLEEALREKEARLEALLLQ 100
>3qne_A Seryl-tRNA synthetase, cytoplasmic; amino acid biosynthesis,
CTG-clade, codon ambiguity, pathoge II aminoacyl-tRNA
synthetase family; 2.00A {Candida albicans} PDB: 3qo7_A*
3qo8_A* 3qo5_A
Length = 485
Score = 36.8 bits (86), Expect = 0.029
Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Query: 496 KERNAA---VAELKQAQTENEALKEKLTSLEQELKVSEEALATAQNSLDSKLRE 546
K+ N+ + + +A+ + + L + L E K E A A +L SK+ +
Sbjct: 54 KKLNSVQKEIGKRFKAKEDAKDLIAEKEKLSNEKKEIIEKEAEADKNLRSKINQ 107
>2fxo_A Myosin heavy chain, cardiac muscle beta isoform; coiled coil
(dimeric, parallel), familial hypertrophic
cardiomyopathy, FHC-associated mutant E924K; 2.50A {Homo
sapiens} SCOP: h.1.26.1 PDB: 2fxm_A
Length = 129
Score = 34.5 bits (79), Expect = 0.031
Identities = 23/109 (21%), Positives = 49/109 (44%), Gaps = 4/109 (3%)
Query: 503 AELKQAQTENEALKEKLTSLEQELKVSEEALATAQ---NSLDSKLREHQALSNTIESMQK 559
E+ + E LKE L E K EE + + N L +++ Q E
Sbjct: 13 KEMASMKEEFTRLKEALEKSEARRKELEEKMVSLLQEKNDLQLQVQAEQDNLADAEERCD 72
Query: 560 EMEQSAVRV-REMSGISEKYEKDRKTLLELKSAKERLELEVRGYKLDLE 607
++ ++ +++ ++ ++++ E + + EL + K +LE E K D++
Sbjct: 73 QLIKNKIQLEAKVKEMNKRLEDEEEMNAELTAKKRKLEDECSELKRDID 121
Score = 30.2 bits (68), Expect = 0.97
Identities = 19/116 (16%), Positives = 48/116 (41%), Gaps = 3/116 (2%)
Query: 448 KEKENLEKTDDRKLEVCEVSKELEVLRGELEEQKTATKQWKKDWYQSVKERNAAVAELKQ 507
+ ++ + + + E ++ E R ELEE+ + Q K D V+ +A+
Sbjct: 10 EREKEMASMKEEFTRLKEALEKSEARRKELEEKMVSLLQEKNDLQLQVQAEQDNLAD--- 66
Query: 508 AQTENEALKEKLTSLEQELKVSEEALATAQNSLDSKLREHQALSNTIESMQKEMEQ 563
A+ + L + LE ++K + L + + + L + ++++++
Sbjct: 67 AEERCDQLIKNKIQLEAKVKEMNKRLEDEEEMNAELTAKKRKLEDECSELKRDIDD 122
Score = 29.1 bits (65), Expect = 2.3
Identities = 22/124 (17%), Positives = 55/124 (44%), Gaps = 11/124 (8%)
Query: 405 LSKKEEEIDRLRQEMVKKESDLVATSSDLVATRHELEEVRSELK-EKENLEKTDDRKLEV 463
++ +EE RL++ + K E+ +V+ E +++ +++ E++NL ++R ++
Sbjct: 15 MASMKEEFTRLKEALEKSEARRKELEEKMVSLLQEKNDLQLQVQAEQDNLADAEERCDQL 74
Query: 464 CEVSKELEVLRGELEEQKTATKQWKKDWYQSVKERNAAVAELKQAQTENEALKEKLTSLE 523
+ +LE E+ ++ ++ A+ ++ + E LK + LE
Sbjct: 75 IKNKIQLEAKVKEMNKRLEDEEE----------MNAELTAKKRKLEDECSELKRDIDDLE 124
Query: 524 QELK 527
L
Sbjct: 125 LTLA 128
>3err_A Fusion protein of microtubule binding domain from mouse cytoplasmic
dynein and seryl-tRNA...; coiled coil, ligase; HET: AMP;
2.27A {Mus musculus}
Length = 536
Score = 36.6 bits (85), Expect = 0.033
Identities = 14/112 (12%), Positives = 34/112 (30%), Gaps = 18/112 (16%)
Query: 432 DLVATRHELEEVRSELKEKENLEKTDDRKLEVCEVSKELEVLRGELEEQKTATKQWKKDW 491
L + + +++RS + +EN T E ++ + +
Sbjct: 100 LLGESTTDWKQIRSIIM-RENFIPTIVNFSAEEISDAIREKMKKNYMSNPSYNYEIVN-- 156
Query: 492 YQSVKERNAAVAELKQAQTENE----------ALKEKLTSLEQELKVSEEAL 533
+ A + + L+ +L LE + K +++ L
Sbjct: 157 -----RASLAAGPMVKWAIAQLNYADMLKRVEPLRNELQKLEDDAKDNQQKL 203
Score = 30.4 bits (69), Expect = 2.8
Identities = 11/113 (9%), Positives = 35/113 (30%), Gaps = 12/113 (10%)
Query: 410 EEIDRLRQEMVKKESDLVATSSDLVATRHELEEVRSELKEKENLEKTDDRKLEVCEVSKE 469
+ ++R ++++ + +E EK + + E
Sbjct: 106 TDWKQIRSIIMRENFIPT------------IVNFSAEEISDAIREKMKKNYMSNPSYNYE 153
Query: 470 LEVLRGELEEQKTATKQWKKDWYQSVKERNAAVAELKQAQTENEALKEKLTSL 522
+ + ++ +K EL++ + + + ++KL +L
Sbjct: 154 IVNRASLAAGPMVKWAIAQLNYADMLKRVEPLRNELQKLEDDAKDNQQKLEAL 206
>2efr_A General control protein GCN4 and tropomyosin 1 Al; destabilizing
cluster, hydrophobic core, contractIle protein; 1.80A
{Saccharomyces cerevisiae} PDB: 2efs_A 2d3e_A
Length = 155
Score = 35.0 bits (80), Expect = 0.035
Identities = 26/142 (18%), Positives = 58/142 (40%), Gaps = 2/142 (1%)
Query: 446 ELKEKENLEKTDDRKLEVCEVSKELEVLRGELEEQKTATKQWKKDWYQSVKERNAAVAEL 505
+K+ E+ + K + E+ L+ LE + + + + +E L
Sbjct: 1 RMKQLEDKVEELLSKNY--HLENEVARLKKLLERAEERAELSEGKSAELEEELKTVTNNL 58
Query: 506 KQAQTENEALKEKLTSLEQELKVSEEALATAQNSLDSKLREHQALSNTIESMQKEMEQSA 565
K + + E +K E+E+KV + L A+ + R L +I+ ++ E+
Sbjct: 59 KSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQK 118
Query: 566 VRVREMSGISEKYEKDRKTLLE 587
++ + +S ++ E + LL
Sbjct: 119 LKYKAISEEMKQLEDKVEELLS 140
Score = 34.6 bits (79), Expect = 0.047
Identities = 25/147 (17%), Positives = 57/147 (38%), Gaps = 2/147 (1%)
Query: 504 ELKQAQTENEALKEKLTSLEQELKVSEEALATAQNSLDSKLREHQALSNTIESMQKEMEQ 563
+KQ + + E L K LE E+ ++ L A+ + + L ++++ ++
Sbjct: 1 RMKQLEDKVEELLSKNYHLENEVARLKKLLERAEERAELSEGKSAELEEELKTVTNNLKS 60
Query: 564 SAVRVREMSGISEKYEKDRKTLLELKSAKERLELEVRGYKLDLESTRRELETNKDQTIEL 623
+ + S +KYE++ K L + E LE + +LE
Sbjct: 61 LEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLK 120
Query: 624 RAK--SKLEKAEGELTTVREENKKLKQ 648
++++ E ++ + +N L+
Sbjct: 121 YKAISEEMKQLEDKVEELLSKNYHLEN 147
Score = 33.0 bits (75), Expect = 0.14
Identities = 22/152 (14%), Positives = 55/152 (36%), Gaps = 4/152 (2%)
Query: 476 ELEEQKTATKQWKKDWYQSVKERNAAVAELKQAQTENEALKEKLTSLEQELKVSEEALAT 535
+++ + ++ Y E L++A+ E + K LE+ELK L +
Sbjct: 1 RMKQLEDKVEELLSKNYHLENEVARLKKLLERAEERAELSEGKSAELEEELKTVTNNLKS 60
Query: 536 AQNSLDSKLREHQALSNTIESMQKEMEQSAVRVREMSGISEKYEKDRKTL----LELKSA 591
+ + ++ I+ + +++++ R K EK L K
Sbjct: 61 LEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLK 120
Query: 592 KERLELEVRGYKLDLESTRRELETNKDQTIEL 623
+ + E++ + +E + +++ L
Sbjct: 121 YKAISEEMKQLEDKVEELLSKNYHLENEVARL 152
Score = 28.4 bits (63), Expect = 5.2
Identities = 21/148 (14%), Positives = 50/148 (33%), Gaps = 5/148 (3%)
Query: 409 EEEIDRLRQEMVKKESDLVATSSDLVATRHELEEVRSELKEKEN-LEKTDDRKLEVCEVS 467
E++++ L + E+++ L E + E E L+ + + +
Sbjct: 6 EDKVEELLSKNYHLENEVARLKKLLERAEERAELSEGKSAELEEELKTVTNNLKSLEAQA 65
Query: 468 KELEVLRGELEEQKTATKQWKKDWYQSVKERNAAVA----ELKQAQTENEALKEKLTSLE 523
++ + EE+ K+ + +V + + E A K K ++
Sbjct: 66 EKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAIS 125
Query: 524 QELKVSEEALATAQNSLDSKLREHQALS 551
+E+K E+ + + E L
Sbjct: 126 EEMKQLEDKVEELLSKNYHLENEVARLK 153
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L
structural genomics, center for structural genomics of
INFE diseases; 2.70A {Salmonella enterica subsp}
Length = 175
Score = 34.8 bits (79), Expect = 0.052
Identities = 17/86 (19%), Positives = 33/86 (38%), Gaps = 12/86 (13%)
Query: 401 HTSLLSKKEEEIDRLRQEMVKKESDLVATSSDLVATRHELEEVRSELKEKENLEKTDDRK 460
+ L ++++ ++ + + S L R +L R E D K
Sbjct: 65 GSPLTTEQQATAQKIYDDYYTQTSAL----------RQQLISKRYEYNALLTASSPDTAK 114
Query: 461 LEVCEVSKELEVLRGELEEQKTATKQ 486
+ V+KE+E L +L+EQ+
Sbjct: 115 IN--AVAKEMESLGQKLDEQRVKRDV 138
>4dk0_A Putative MACA; alpha-hairpin, lipoyl, beta-barrel, periplasmic
protein, MEM protein; 3.50A {Aggregatibacter
actinomycetemcomitans} PDB: 4dk1_A
Length = 369
Score = 35.5 bits (82), Expect = 0.054
Identities = 14/75 (18%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Query: 470 LEVLRGELEEQKTATKQWKKDW--YQSVKERNA-AVAELKQAQTENEALKEKLTSLEQEL 526
L + +L +KTA ++ + + A ++ L A+ K ++ +++ +
Sbjct: 79 LASYQAQLVARKTAYDVALSNYQRLSKLYGQKATSLDTLNTAKATLNNAKAEMDVVQENI 138
Query: 527 KVSEEALATAQNSLD 541
K +E + TA+ +L
Sbjct: 139 KQAEIEVNTAETNLG 153
>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET:
MSE; 2.33A {Homo sapiens}
Length = 168
Score = 34.3 bits (78), Expect = 0.061
Identities = 23/159 (14%), Positives = 61/159 (38%), Gaps = 1/159 (0%)
Query: 462 EVCEVSKELEVLRGELEEQKTATKQWKKDWYQSVKERNAAVAELKQAQTENEALKEKLTS 521
++ ++ K+LE L + + +K + K + + ++ Q N L+ +
Sbjct: 7 KLSQLQKQLEEANDLLRTESDTAVRLRKSHTEMSKSISQLESLNRELQERNRILENSKSQ 66
Query: 522 LEQELKVSEEALATAQNSLDSKLREHQALSNTIESMQKEMEQSAVRVREMSGISEKYEKD 581
+++ + L + L I S+Q+E++ + ++ G ++ +
Sbjct: 67 TDKDYYQLQAILEAERRDRGHDSEMIGDLQARITSLQEEVKHLKHNLEKVEGERKEAQDM 126
Query: 582 RKTLLELKSAKE-RLELEVRGYKLDLESTRRELETNKDQ 619
+ K+ E L +++ + LE E + K +
Sbjct: 127 LNHSEKEKNNLEIDLNYKLKSLQQRLEQEVNEHKVTKAR 165
Score = 33.9 bits (77), Expect = 0.085
Identities = 34/165 (20%), Positives = 65/165 (39%), Gaps = 5/165 (3%)
Query: 517 EKLTSLEQELKVSEEALATAQNSLDSKLREHQALSNTIESMQKEMEQSAVRVREMSGISE 576
EKL+ L+++L+ + + L T ++ + H +S +I ++ + R R +
Sbjct: 6 EKLSQLQKQLEEANDLLRTESDTAVRLRKSHTEMSKSISQLESLNRELQERNRILENSKS 65
Query: 577 KYEKDRKTLLELKSAKERLELEVRGYKLDLESTRRELETNKDQTIELRAKSKLEKAEGEL 636
+ +KD L + A+ R DL++ L+ K LEK EGE
Sbjct: 66 QTDKDYYQLQAILEAERRDRGHDSEMIGDLQARITSLQEEVK-----HLKHNLEKVEGER 120
Query: 637 TTVREENKKLKQGKIRLVYSLFKDPQPAQSKLEKAEGELTTVREE 681
++ ++ K L L + Q +LE+ E +
Sbjct: 121 KEAQDMLNHSEKEKNNLEIDLNYKLKSLQQRLEQEVNEHKVTKAR 165
Score = 31.2 bits (70), Expect = 0.81
Identities = 24/165 (14%), Positives = 56/165 (33%), Gaps = 5/165 (3%)
Query: 391 VSSLQQDLTSHTSLLSKKEEEIDRLRQEMVKKESDLVATSSDLVATRHELEEVRSELKEK 450
+S LQ+ L LL + + RLR+ + + S + + + +
Sbjct: 8 LSQLQKQLEEANDLLRTESDTAVRLRKSHTEMSKSISQLESLNRELQERNRILENSKSQT 67
Query: 451 ENLEKTDDRKLEVCEVSKELEVLRGELEEQKTATKQWKKDWYQSVKERNAAVAELKQAQT 510
+ LE ++ + + + +++ E K+AQ
Sbjct: 68 DKDYYQLQAILE--AERRDRGHDSEMIGDLQARITSLQEEVKHLKHNLEKVEGERKEAQD 125
Query: 511 ENEALKEKLTSLEQELKVSEEALATAQNSLDSKLREHQALSNTIE 555
+++ +LE +L L + Q L+ ++ EH+ +
Sbjct: 126 MLNHSEKEKNNLEIDL---NYKLKSLQQRLEQEVNEHKVTKARLT 167
Score = 28.2 bits (62), Expect = 6.7
Identities = 20/125 (16%), Positives = 48/125 (38%), Gaps = 2/125 (1%)
Query: 439 ELEEVRSELKEKENLEKTDDRKLEVCEVSKELEVLRGELEEQKTATKQWKKDWYQSVKER 498
+LEE L+ + + + E+SK + L E + + + Q+ K+
Sbjct: 14 QLEEANDLLRTES--DTAVRLRKSHTEMSKSISQLESLNRELQERNRILENSKSQTDKDY 71
Query: 499 NAAVAELKQAQTENEALKEKLTSLEQELKVSEEALATAQNSLDSKLREHQALSNTIESMQ 558
A L+ + + E + L+ + +E + +++L+ E + + + +
Sbjct: 72 YQLQAILEAERRDRGHDSEMIGDLQARITSLQEEVKHLKHNLEKVEGERKEAQDMLNHSE 131
Query: 559 KEMEQ 563
KE
Sbjct: 132 KEKNN 136
Score = 28.2 bits (62), Expect = 8.3
Identities = 22/142 (15%), Positives = 64/142 (45%), Gaps = 5/142 (3%)
Query: 350 SEDMRHWKRDRLQLLQQLAEAKASLEDLSCSRTRVLALQAQVSSLQQDLTSHTSLLSKKE 409
S+ ++ ++ + +++ ++ +L + R L+ S +D ++L +
Sbjct: 26 SDTAVRLRKSHTEMSKSISQLESLNREL---QERNRILENSKSQTDKDYYQLQAILEAER 82
Query: 410 EEIDRLRQEMVKKESDLVATSSDLVATRHELEEVRSELKE-KENLEKTDDRKLEV-CEVS 467
+ + + ++ + + ++ +H LE+V E KE ++ L ++ K + +++
Sbjct: 83 RDRGHDSEMIGDLQARITSLQEEVKHLKHNLEKVEGERKEAQDMLNHSEKEKNNLEIDLN 142
Query: 468 KELEVLRGELEEQKTATKQWKK 489
+L+ L+ LE++ K K
Sbjct: 143 YKLKSLQQRLEQEVNEHKVTKA 164
>3a7p_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic
vesicle, protein transport, transport, vacuole; 2.80A
{Saccharomyces cerevisiae}
Length = 152
Score = 34.1 bits (77), Expect = 0.073
Identities = 19/89 (21%), Positives = 39/89 (43%)
Query: 437 RHELEEVRSELKEKENLEKTDDRKLEVCEVSKELEVLRGELEEQKTATKQWKKDWYQSVK 496
R++ E +EL + + + + L +L+ EL+ ++ ++ K+ K
Sbjct: 37 RNDKEAHLNELFQDNSGAIGGNIVSHDDALLNTLAILQKELKSKEQEIRRLKEVIALKNK 96
Query: 497 ERNAAVAELKQAQTENEALKEKLTSLEQE 525
A L EN L++KL+ L++E
Sbjct: 97 NTERLNAALISGTIENNVLQQKLSDLKKE 125
>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative
splicing, coiled coil, cytoplasmic vesicle, endocytosis,
phosphoprotein, polymorphism; 2.78A {Homo sapiens}
Length = 486
Score = 35.1 bits (79), Expect = 0.098
Identities = 23/196 (11%), Positives = 59/196 (30%), Gaps = 18/196 (9%)
Query: 406 SKKEEEIDRLRQEMVKKESDLVATSSDLVATRHELEEVRSELKEKENLEKTDDRKLEVCE 465
++ E+ + E ++ LV SE + L L
Sbjct: 49 ARIEKAYAQQLTEWARRWRQLVEKGPQYGTVEKAWMAFMSEAERVSELHLEVKASLM--- 105
Query: 466 VSKELEVLRGELEEQKTATKQWKKDWYQSVKERNAAVAELKQAQTENEALKEKLTSLEQE 525
+ K W+K+ + K+ E K+A+ ++ +E
Sbjct: 106 ------------NDDFEKIKNWQKEAFH--KQMMGGFKETKEAEDGFRKAQKPWAKKLKE 151
Query: 526 LKVSEEALATAQNSLDSKLREHQALSNTIESMQKEMEQSAVRVREMSGISEKYEKD-RKT 584
++ +++A A + +++++ ++ + K ++ K+
Sbjct: 152 VEAAKKAHHAACKEEKLAISREANSKADPSLNPEQLKKLQDKIEKCKQDVLKTKEKYEKS 211
Query: 585 LLELKSAKERLELEVR 600
L EL + +
Sbjct: 212 LKELDQGTPQYMENME 227
>3edv_A Spectrin beta chain, brain 1; spectrin repeat, coiled coil, actin
capping, actin-binding, alternative splicing,
calmodulin-binding, cytoplasm; 1.95A {Homo sapiens}
Length = 323
Score = 34.5 bits (79), Expect = 0.10
Identities = 27/218 (12%), Positives = 81/218 (37%), Gaps = 15/218 (6%)
Query: 349 SSEDMRHWKRDRLQLLQQLAEAKASL-EDLSCSRTRVLALQAQVSSLQQDLTSHTSLLSK 407
+S ++ + D ++ ++ + L E+L + V LQ ++ + D+ + + + +
Sbjct: 111 ASYELHKFYHDAKEIFGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQ 170
Query: 408 KEEEIDRLRQEMVKKESDLVATSSDLVATRHELEEVRSELKEKENLEKTD-DRKLEVCEV 466
+E+ RL+ ++D + +E+ E L + + +
Sbjct: 171 LQEDAARLQAAYAGDKADDIQ------KRENEVLEAWKSLLDACESRRVRLVDTGDKFRF 224
Query: 467 SKELEVLRGELEEQKTATKQWKKDWYQSVKERNAAVAELKQAQTENEALKEKLTSLEQEL 526
+ L +E+ + ++ + V + + + E +A + T+ +
Sbjct: 225 FSMVRDLMLWMEDVIRQIE--AQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIEL- 281
Query: 527 KVSEEALATAQNSLDSKLREH-QALSNTIESMQKEMEQ 563
++L ++ +++E L+ + M + E
Sbjct: 282 ---GKSLLARKHYASEEIKEKLLQLTEKRKEMIDKWED 316
>3l4q_C Phosphatidylinositol 3-kinase regulatory subunit beta; PI3K,
phosphoinositide-3-kinase, influenza virus, NS1; 2.30A
{Bos taurus} PDB: 2v1y_B
Length = 170
Score = 33.6 bits (76), Expect = 0.11
Identities = 27/180 (15%), Positives = 59/180 (32%), Gaps = 14/180 (7%)
Query: 395 QQDLTSHTSLLSKKEEEIDRLRQEMVKKESDLVATSSDLVATRHELEEVRSELKEKENLE 454
QQD + ++ Q+ K + + T EL+ R+ ++
Sbjct: 2 QQDQIVKEDSVEAVGAQLKVYHQQYQDKSREYDQLYEEYTRTSQELQMKRTAIEAFNETI 61
Query: 455 KTDDRKLEVCEVSKELEVLRGELEEQKTATKQWKKDWYQSVKERNAAVAELKQAQTENEA 514
K + + + E S + + R E + KE + ++ ++
Sbjct: 62 KIFEEQGQTQEKSSKEYLERFRREGNE--------------KEMQRILLNSERLKSRIAE 107
Query: 515 LKEKLTSLEQELKVSEEALATAQNSLDSKLREHQALSNTIESMQKEMEQSAVRVREMSGI 574
+ E T LEQEL+ ++S + L + + Q R ++++
Sbjct: 108 IHESRTKLEQELRAQASDNREIDKRMNSLKPDLMQLRKIRDQYLVWLTQKGARQKKINEW 167
>3u59_A Tropomyosin beta chain; muscle contraction, actin, contractIle
protein; 2.50A {Gallus gallus}
Length = 101
Score = 32.2 bits (73), Expect = 0.15
Identities = 14/67 (20%), Positives = 32/67 (47%)
Query: 497 ERNAAVAELKQAQTENEALKEKLTSLEQELKVSEEALATAQNSLDSKLREHQALSNTIES 556
++ A KQ + E + L++KL E E++ E++ AQ L+ ++ + S
Sbjct: 31 DKKQAEDRCKQLEEEQQGLQKKLKGTEDEVEKYSESVKEAQEKLEQAEKKATDAEAEVAS 90
Query: 557 MQKEMEQ 563
+ + ++
Sbjct: 91 LNRRIQL 97
Score = 29.1 bits (65), Expect = 1.5
Identities = 12/76 (15%), Positives = 33/76 (43%)
Query: 390 QVSSLQQDLTSHTSLLSKKEEEIDRLRQEMVKKESDLVATSSDLVATRHELEEVRSELKE 449
+ + D + EEE L++++ E ++ S + + +LE+ + +
Sbjct: 24 RAEQAEADKKQAEDRCKQLEEEQQGLQKKLKGTEDEVEKYSESVKEAQEKLEQAEKKATD 83
Query: 450 KENLEKTDDRKLEVCE 465
E + +R++++ E
Sbjct: 84 AEAEVASLNRRIQLVE 99
Score = 27.2 bits (60), Expect = 8.1
Identities = 9/69 (13%), Positives = 32/69 (46%)
Query: 496 KERNAAVAELKQAQTENEALKEKLTSLEQELKVSEEALATAQNSLDSKLREHQALSNTIE 555
++ A+ +QA+ + + +++ LE+E + ++ L ++ ++ + +E
Sbjct: 16 LDKENAIDRAEQAEADKKQAEDRCKQLEEEQQGLQKKLKGTEDEVEKYSESVKEAQEKLE 75
Query: 556 SMQKEMEQS 564
+K+ +
Sbjct: 76 QAEKKATDA 84
>3s4r_A Vimentin; alpha-helix, cytoskeleton, intermediate filament,
structural; 2.45A {Homo sapiens} PDB: 3ssu_A
Length = 93
Score = 31.8 bits (73), Expect = 0.17
Identities = 13/58 (22%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 560 EMEQSAVRVREMSGISEKYEKD----RKTLLELKSAKERLELEVRGYKLDLESTRREL 613
E ++ + S + + YE++ R+ + +L + K R+E+E D+ R +L
Sbjct: 36 LAELEQLKGQGKSRLGDLYEEEMRELRRQVDQLTNDKARVEVERDNLAEDIMRLREKL 93
>1nkp_A C-MYC, MYC proto-oncogene protein; transcription, DNA, BHLHZ,
heterodimer, transcription/DNA complex; 1.80A {Homo
sapiens} SCOP: a.38.1.1
Length = 88
Score = 31.1 bits (71), Expect = 0.21
Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 756 VEYLETLQKNNDILSHDNEQLRKKNNDILSHDNEQLR 792
Y+ ++Q L + + LRK+ + L H EQL
Sbjct: 51 TAYILSVQAEEQKLISEEDLLRKR-REQLKHKLEQLG 86
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos
taurus} SCOP: i.9.1.1
Length = 390
Score = 33.7 bits (76), Expect = 0.22
Identities = 25/179 (13%), Positives = 74/179 (41%), Gaps = 14/179 (7%)
Query: 496 KERNAAVAELKQAQTENEALKEKLTSLEQEL-KVSEEALATAQNSLDSKLREHQALSNTI 554
++ + + +L+ + + + +L + + ++ A A N+ ++ + ++ L + I
Sbjct: 63 QDFTSRINKLRDSLFNYQKNSKDSNTLTKNIVELMRGDFAKANNNDNTFKQINEDLRSRI 122
Query: 555 ESMQKEMEQSAVRVREMSGISEKYEKDRKTLLELKSAKERLELEVRGYKLDLESTRRELE 614
E +++++ + R+ + + R L+++K RLE+++ + + S +
Sbjct: 123 EILRRKVIEQVQRINLLQ------KNVRDQLVDMK----RLEVDI---DIKIRSCKGSCS 169
Query: 615 TNKDQTIELRAKSKLEKAEGELTTVREENKKLKQGKIRLVYSLFKDPQPAQSKLEKAEG 673
+ ++L +K ++ + + Q L S P P + K + E
Sbjct: 170 RALEHKVDLEDYKNQQKQLEQVIAINLLPSRDIQYLPILKMSTITGPVPREFKSQLQEA 228
>1u4q_A Spectrin alpha chain, brain; alpha spectrin, three repeats of
spectrin, alpha-helical linker region, 3-helix
coiled-coil, structural protein; 2.50A {Gallus gallus}
SCOP: a.7.1.1 a.7.1.1 a.7.1.1
Length = 322
Score = 33.3 bits (76), Expect = 0.24
Identities = 25/229 (10%), Positives = 74/229 (32%), Gaps = 36/229 (15%)
Query: 362 QLLQQLAEAKASLEDLSCSRTRVLALQAQVSSLQQDLTSHTSLLSKKEEEIDRLRQEMVK 421
+ + ++ ++ +R L ++ +D+ S + +K+ +
Sbjct: 82 DKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDEESWIKEKKLLVS-------- 133
Query: 422 KESDLVATSSDLVATRHELEEVRSELKEKEN-LEKTDDRKLEVC--------EVSKELEV 472
D + + R + + + +EL E ++ D ++ E+ + L
Sbjct: 134 -SEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGKEEIQQRLAQ 192
Query: 473 LRGELEEQKTATKQWKKD---------WYQSVKERNAAVAELKQA---------QTENEA 514
+E K + + +V+E A + E +
Sbjct: 193 FVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAWINEKMTLVASEDYGDTLAAIQG 252
Query: 515 LKEKLTSLEQELKVSEEALATAQNSLDSKLREHQALSNTIESMQKEMEQ 563
L +K + E + V ++ + + + ++++ I + K ++
Sbjct: 253 LLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHHVENITAKMKGLKG 301
Score = 31.0 bits (70), Expect = 1.6
Identities = 44/299 (14%), Positives = 113/299 (37%), Gaps = 35/299 (11%)
Query: 504 ELKQAQTENEALKEKLTSLEQELKVSEEALATAQNSLDSKLREHQALSNTIESMQKEMEQ 563
+ + T + L+ +E L + E S+++ L++HQ L I + + ++
Sbjct: 4 KQQNFNTGIKDFDFWLSEVEALL--ASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKD 61
Query: 564 SAVRVREMSGIS-EKYEKDRKTLLELKSAKERLELEVRGYKLDLESTRRELETNKDQTIE 622
+ + S + + + +R++ + L + R + +D E
Sbjct: 62 LNSQADSLMTSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDE 121
Query: 623 L----RAKSKLEKAE--GELTTVREENKKLKQGK-------------IRLVYSLFKDPQP 663
K + + +LT V+ KK K+ + + L D
Sbjct: 122 ESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTI 181
Query: 664 AQSKLEKAEGELTTVREENKKLKVSFFFTLESNSLFWLDPNTFLSSLEDLKSNYTERESK 723
+ ++++ + +E K+L + LE + + F++++E+ ++ E+ +
Sbjct: 182 GKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQ----FVANVEEEEAWINEKMTL 237
Query: 724 LRSANEIIGEYETKITALESTMTRSESYCKEMVEYLETLQKNNDILSHDNEQLRKKNND 782
+ S +Y + A++ + + E++ + + + + + + E L KKNN
Sbjct: 238 VASE-----DYGDTLAAIQGLLKKHEAFETDFTVHKDRVND----VCANGEDLIKKNNH 287
>3ahn_A Oligopeptidase, PZ peptidase A; hydrolase, hydrolase-hydrolase
inhibitor complex; HET: 3A1; 1.80A {Geobacillus SP} PDB:
3ahm_A* 3aho_A* 2h1n_A 2h1j_A
Length = 564
Score = 33.6 bits (77), Expect = 0.28
Identities = 33/223 (14%), Positives = 71/223 (31%), Gaps = 37/223 (16%)
Query: 431 SDLVATRHELEEVRSELKEKENLEKTDDRKLEVCEVSKELEVLRGELEEQKT-----ATK 485
S+ R +E++++ ++ + E E KE+ LR + T
Sbjct: 4 SEFRYERPNIEKLKASFQQALQSFQKASNAEEQNEAMKEINQLRNDFSTMAQICYIRHTI 63
Query: 486 QWKKDWYQSVKER--------NAAVAELKQA--------QTENEALKEKLTSLEQELKVS 529
++Y+ ++ V + +A Q E + K+ E ELK
Sbjct: 64 DTNDEFYKQEQDFFDEVEPIVKGLVNDYYRALVSSPFRSQLEGKWGKQLFALAEAELKTY 123
Query: 530 EEALATAQNSLDSKLREHQALSN-----------TIESMQKEMEQSAVRVRE--MSGISE 576
+ + E+ L T+ +Q +E +R+
Sbjct: 124 SPDIVEDLQLENKLTSEYTKLVASAKIFFEGEERTLAQLQPFVESPDRDMRKRASEARFT 183
Query: 577 KYEKDRKTLLEL--KSAKERLEL-EVRGYKLDLESTRRELETN 616
+++ + E+ + K R + + G+K +E L
Sbjct: 184 FFQEHEEKFDEIYDQLVKVRTAIAQKLGFKNFVELGYARLGRT 226
>3ter_A Mammalian stromal interaction molecule-1; dimer, metal binding
protein; 2.55A {Caenorhabditis elegans}
Length = 136
Score = 32.0 bits (72), Expect = 0.30
Identities = 28/142 (19%), Positives = 60/142 (42%), Gaps = 13/142 (9%)
Query: 434 VATRHELEEVRSELKEKENLEKTDDRKLEVCEVSKELEVLRGELEEQKTATKQWKKDWYQ 493
V E+E +R +L+E E + + + + L E E
Sbjct: 2 VVNHTEMENLRVQLEEAERRLEANSNGSQAPLALQPLLRRTCENEMA------------F 49
Query: 494 SVKERNAAVAELKQAQTENEALKEKLTSLEQELKVSEEALATAQNSLDSKLREHQALSNT 553
K+R E+K+A + L++K S+ LK++ A A+ + +DSK+ ++
Sbjct: 50 LEKQRQDCFKEMKEAIEMVDRLQKKQGSVLSSLKLATGA-ASTSDQVDSKIFALKSRMEK 108
Query: 554 IESMQKEMEQSAVRVREMSGIS 575
I ++ +E ++ +++ + G
Sbjct: 109 IHTLTRETQERWLQIESLCGFP 130
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase,
homodimer, rossman fold, 4 domai L-histidine
biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A
{Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A*
1kar_A
Length = 434
Score = 32.9 bits (76), Expect = 0.42
Identities = 25/107 (23%), Positives = 45/107 (42%), Gaps = 16/107 (14%)
Query: 478 EEQKTATKQWKKDWYQSVKERNAAVAE-LKQAQTE-NEALKEKLT------SLEQELKVS 529
E+Q+ + +S+ V + L + +EAL+E + ++ LKVS
Sbjct: 15 EQQRQLLMRPAISASESI---TRTVNDILDNVKARGDEALRE-YSAKFDKTTVT-ALKVS 69
Query: 530 EEALATAQNSLDSKLRE--HQALSNTIESMQKEMEQSAVRVREMSGI 574
E +A A L +L++ A+ N IE+ + V V G+
Sbjct: 70 AEEIAAASERLSDELKQAMAVAVKN-IETFHTAQKLPPVDVETQPGV 115
>1w1w_A Structural maintenance of chromosome 1; cohesin, chromosome
segregation, cell adhesion, kleisin, MIT cell cycle;
HET: ATG; 2.90A {Saccharomyces cerevisiae} SCOP:
c.37.1.12
Length = 430
Score = 32.7 bits (75), Expect = 0.42
Identities = 20/175 (11%), Positives = 56/175 (32%), Gaps = 40/175 (22%)
Query: 439 ELEEVRSELKEKENLEKTDDRKLEVCEVSKELEVLRGELEEQKTATKQWKKDWYQSVKER 498
LE +K K L + +V +++ + V + E+ + + Q+KK++ + ++
Sbjct: 134 FLENENILIKAKNFLVF----QGDVEQIAAQSPVELSRMFEEVSGSIQYKKEYEELKEKI 189
Query: 499 NAAVAELKQAQTENEALKEKLTSLEQELKVSEEALATAQNSLDSKLREHQALSNTIESMQ 558
++ + +L + +
Sbjct: 190 EKLSKSATESIKNRRRIHGELKTYKSPGL------------------------------- 218
Query: 559 KEMEQSAVRVREMSGISEKYEKDRKTLLELKSAKERLELEVRGYKLDLESTRREL 613
E+ R ++E +LK+ ++++ + ++ R+EL
Sbjct: 219 -EVLFQGPRGSRYDEAEGRFEVINNETEQLKAEEKKILNQFL----KIKKKRKEL 268
Score = 30.8 bits (70), Expect = 1.8
Identities = 13/115 (11%), Positives = 32/115 (27%)
Query: 383 RVLALQAQVSSLQQDLTSHTSLLSKKEEEIDRLRQEMVKKESDLVATSSDLVATRHELEE 442
L Q V + S + ++ + ++E + + + S +
Sbjct: 146 NFLVFQGDVEQIAAQSPVELSRMFEEVSGSIQYKKEYEELKEKIEKLSKSATESIKNRRR 205
Query: 443 VRSELKEKENLEKTDDRKLEVCEVSKELEVLRGELEEQKTATKQWKKDWYQSVKE 497
+ ELK ++ + E E + + K +K +
Sbjct: 206 IHGELKTYKSPGLEVLFQGPRGSRYDEAEGRFEVINNETEQLKAEEKKILNQFLK 260
>1wle_A Seryl-tRNA synthetase; ligase; HET: SRP; 1.65A {Bos taurus}
Length = 501
Score = 33.0 bits (76), Expect = 0.44
Identities = 13/124 (10%), Positives = 39/124 (31%), Gaps = 26/124 (20%)
Query: 432 DLVATRHELEEVRSELKEKENLEKTDDRKLEVCEVSKELEVLRGELEEQKTATKQWKKDW 491
D+ + E+ L ++ ++ D + +EL LR ++ +
Sbjct: 42 DMESLCAYPEDAARALDLRKGELRSKDLP-GIISTWQELRQLREQIRSLEE--------- 91
Query: 492 YQSVKERNAAVAELKQA-----------QTENEALKEKLTSLEQELKVSEEALATAQNSL 540
E+ A ++ + ++L+ + + ++L + A +
Sbjct: 92 -----EKEAVTEAVRALVVNQDNSQVQQDPQYQSLRARGREIRKQLTLLYPKEAQLEEQF 146
Query: 541 DSKL 544
+
Sbjct: 147 YLRA 150
>4emc_A Monopolin complex subunit CSM1; RWD domain, kinetochore-binding,
kinetoch replication-replication complex; 3.05A
{Saccharomyces cerevisiae} PDB: 3n7n_A 3n4x_A
Length = 190
Score = 32.0 bits (72), Expect = 0.44
Identities = 19/97 (19%), Positives = 34/97 (35%), Gaps = 4/97 (4%)
Query: 486 QWKKDWYQSVKERNAAVAELKQAQTENEALKEKLTSLEQELKVSEEALATAQNSLDSKLR 545
+K Q + + VA L EN L EKL + E+K ++ + + +
Sbjct: 6 VYKNSVKQQIDSADLLVANL---VNENFVLSEKLDTKATEIKQLQKQIDSLNAQVKELKT 62
Query: 546 EHQALSNTIESMQKEMEQ-SAVRVREMSGISEKYEKD 581
+ + E ++ E VRV + D
Sbjct: 63 QTSQQAENSEVIKDLYEYLCNVRVHKSYEDDSGLWFD 99
>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex,
spectrin, spectrin repeat, three helix bundle, ANKY
binding, disease mutation, structural protein, ZU5
sandwich; 2.75A {Homo sapiens} PDB: 3kbu_A
Length = 326
Score = 32.6 bits (74), Expect = 0.50
Identities = 20/118 (16%), Positives = 43/118 (36%), Gaps = 2/118 (1%)
Query: 503 AELKQAQTENEALKEKLTSL-EQELKVSEEALATAQNSLDSKLREHQALSNTIESMQKEM 561
+ +AQ E + EQEL V + + + L+ H +E + +
Sbjct: 1 SNANEAQQYYLDADEAEAWIGEQELYVISDEIPKDEEGAIVMLKRHLRQQRAVEDYGRNI 60
Query: 562 EQSAVRVREM-SGISEKYEKDRKTLLELKSAKERLELEVRGYKLDLESTRRELETNKD 618
+Q A R + + S + E+ + ++ L+ K LE+ + ++
Sbjct: 61 KQLASRAQGLLSAGHPEGEQIIRLQGQVDKHYAGLKDVAEERKRKLENMYHLFQLKRE 118
Score = 30.7 bits (69), Expect = 1.6
Identities = 21/128 (16%), Positives = 44/128 (34%), Gaps = 7/128 (5%)
Query: 362 QLLQQLAEAKASLEDLSCSRTRVLALQAQVSSLQQDLTSHTSLLSKKEEEIDRLR----- 416
+ L E A L +L +R ++LA + L+ +K E+
Sbjct: 190 EWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYTGAEILGLIDEKHRELPEDVGLDAS 249
Query: 417 --QEMVKKESDLVATSSDLVATRHELEEVRSELKEKENLEKTDDRKLEVCEVSKELEVLR 474
+ + + L + ++V + L+ EK + + + EVS + L
Sbjct: 250 TAESFHRVHTAFERDVHLLGVQVQQFQDVATRLQTAYAGEKAEAIQNKEQEVSAAWQALL 309
Query: 475 GELEEQKT 482
++T
Sbjct: 310 DACAGRRT 317
>3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle
protein; 1.80A {Gallus gallus} PDB: 3u1a_A
Length = 101
Score = 30.6 bits (69), Expect = 0.51
Identities = 13/71 (18%), Positives = 30/71 (42%)
Query: 493 QSVKERNAAVAELKQAQTENEALKEKLTSLEQELKVSEEALATAQNSLDSKLREHQALSN 552
Q+ ++ AA KQ + + L+++L E E L +++SL +
Sbjct: 27 QAEADKKAAEERSKQLEDDIVQLEKQLRVTEDSRDQVLEELHKSEDSLLFAEENAAKAES 86
Query: 553 TIESMQKEMEQ 563
+ S+ + ++
Sbjct: 87 EVASLNRRIQL 97
Score = 29.1 bits (65), Expect = 2.0
Identities = 10/76 (13%), Positives = 30/76 (39%)
Query: 390 QVSSLQQDLTSHTSLLSKKEEEIDRLRQEMVKKESDLVATSSDLVATRHELEEVRSELKE 449
+ + D + + E++I +L +++ E +L + L +
Sbjct: 24 RAEQAEADKKAAEERSKQLEDDIVQLEKQLRVTEDSRDQVLEELHKSEDSLLFAEENAAK 83
Query: 450 KENLEKTDDRKLEVCE 465
E+ + +R++++ E
Sbjct: 84 AESEVASLNRRIQLVE 99
>1s35_A Beta-I spectrin, spectrin beta chain, erythrocyte; two repeats of
spectrin, alpha helical linker region, 3- helix
coiled-coils, beta spectrin; 2.40A {Homo sapiens} SCOP:
a.7.1.1 a.7.1.1
Length = 214
Score = 32.2 bits (73), Expect = 0.53
Identities = 27/198 (13%), Positives = 67/198 (33%), Gaps = 20/198 (10%)
Query: 391 VSSLQQDLTSHTSLLSKKEEEIDRLRQEMVKKESDLVATSSDLVATRHELEEVRSELKEK 450
+ +Q L H + + + D ++ + + ++ + + E L ++
Sbjct: 32 LPEAEQLLQQHAGIKDEIDGHQDSYQR--------VKESGEKVIQGQTDPE--YLLLGQR 81
Query: 451 ENLEKTDDRKLEVCEVSKE-LEVLRGELEEQKTATKQWKKDWYQSVKERNAAVAELKQAQ 509
LE D + + + L L Q+ + + S +E A E +
Sbjct: 82 --LEGLDTGWDALGRMWESRSHTLAQCLGFQEFQKDAKQAEAILSNQEYTLAHLEPPDSL 139
Query: 510 TENEALKEKLTSLEQELKVSEEALATAQNSLDSKLREHQALSNTIESMQKEMEQSAVRVR 569
EA K ++ + + + + +S + + E S+ I+ + +E +
Sbjct: 140 EAAEAGIRKFEDFLGSMENNRDKVLSPVDSGNKLVAEGNLYSDKIKEKVQLIEDRHRKNN 199
Query: 570 EMSGISEKYEKDRKTLLE 587
E + ++ LL
Sbjct: 200 EKA-------QEASVLLR 210
>1hlo_A Protein (transcription factor MAX); transcriptional regulation, DNA
binding, complex (transcription factor MAX/DNA),
transcription/DNA complex; HET: DNA; 2.80A {Homo
sapiens} SCOP: a.38.1.1
Length = 80
Score = 30.0 bits (68), Expect = 0.54
Identities = 6/25 (24%), Positives = 15/25 (60%)
Query: 756 VEYLETLQKNNDILSHDNEQLRKKN 780
EY++ +++ N D + L+++N
Sbjct: 56 TEYIQYMRRKNHTHQQDIDDLKRQN 80
>2xnx_M M protein, M1-BC1; cell adhesion, virulence factor, streptococcal
toxic shock S; 3.30A {Streptococcus pyogenes}
Length = 146
Score = 31.4 bits (70), Expect = 0.55
Identities = 26/148 (17%), Positives = 58/148 (39%), Gaps = 10/148 (6%)
Query: 495 VKERNAAVAELKQAQTENEALKEKLTSLEQELKVSEEALATAQNSLDSKLREHQALSNTI 554
V +R EL++ + E ++ + E+ L + +L+ + + N
Sbjct: 2 VWDRQRLEKELEEKKEALELAIDQASRDYHRATALEKELEEKKKALELAIDQASQDYNRA 61
Query: 555 ESMQKEME----QSAVRVREMSGISEKYEKDRKTLLELKSAKERLELEVRGYKLDLESTR 610
++KE+E + + + + ++ +L K +LE E + +S R
Sbjct: 62 NVLEKELEAITREQEINRNLLGNAKLELDQLSSEKEQLTIEKAKLEEEKQISDASRQSLR 121
Query: 611 RELETNKDQTIELRAKSKLEKAEGELTT 638
R+L+ ++ AK ++EK E
Sbjct: 122 RDLDASR------EAKKQVEKDLLEHHH 143
Score = 29.1 bits (64), Expect = 3.4
Identities = 28/132 (21%), Positives = 51/132 (38%), Gaps = 9/132 (6%)
Query: 411 EIDRLRQEMVKKESDLVATSSDLVATRHELEEVRSELKEKENLEKTDDRKLEVCEVSKEL 470
+ RL +E+ +K+ L H + EL+EK+ + + +
Sbjct: 4 DRQRLEKELEEKKEALELAIDQASRDYHRATALEKELEEKKKALELAIDQAS--QDYNRA 61
Query: 471 EVLRGELEEQKTATKQWKKDWYQSVKERNAAVAELKQAQTENEALKEKLTSLEQELKVSE 530
VL ELE + + A EL Q +E E L + LE+E ++S+
Sbjct: 62 NVLEKELEAITREQEI-------NRNLLGNAKLELDQLSSEKEQLTIEKAKLEEEKQISD 114
Query: 531 EALATAQNSLDS 542
+ + + LD+
Sbjct: 115 ASRQSLRRDLDA 126
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome;
2.95A {Homo sapiens}
Length = 450
Score = 32.4 bits (73), Expect = 0.67
Identities = 35/247 (14%), Positives = 91/247 (36%), Gaps = 13/247 (5%)
Query: 523 EQELKVSEEALATAQNSLDSKLREHQALSNTIESMQKEMEQSAVRVREMSGISEKYEKDR 582
+Q ++ A S++ + H+ + N+I + ++++ +RE S I + E++
Sbjct: 20 QQRAEMDMVAWGVDLASVEQHINSHRGIHNSIGDYRWQLDKIKADLREKSAIYQ-LEEEY 78
Query: 583 KTLLELKSAKERLELEVRGYKLDLE------STRRELETNKDQTIELRAKSKLEKAEGEL 636
+ LL+ + +++ + E E D + + ++ ++A
Sbjct: 79 ENLLKASFERMDHLRQLQNIIQATSREIMWINDCEEEELLYDWSDKNTNIAQKQEAFSIR 138
Query: 637 TTVREENKKLKQGKIRLVYSLFKDPQPAQSKLEKAEGELTTVREENKKLKVSFFFTLESN 696
+ E +K + L + PA K+E L T ++ L+ N
Sbjct: 139 MSQLEVKEKELNKLKQESDQLVLNQHPASDKIEAYMDTLQTQWSWILQITKCIDVHLKEN 198
Query: 697 SLFWLDPNTFLSSLEDLKSNYTERESKLRSANEIIGEYETKITALESTMTRSESYCKEMV 756
+ ++ F + ++ + +R + + + L + E ++++
Sbjct: 199 AAYFQ----FFEEAQSTEAYLKGLQDSIRK--KYPCDKNMPLQHLLEQIKELEKEREKIL 252
Query: 757 EYLETLQ 763
EY +Q
Sbjct: 253 EYKRQVQ 259
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP,
manganese, transferase; HET: ADP; 1.89A {Archaeoglobus
fulgidus} PDB: 1zp9_A* 1ztf_A*
Length = 258
Score = 32.0 bits (72), Expect = 0.70
Identities = 15/97 (15%), Positives = 31/97 (31%), Gaps = 10/97 (10%)
Query: 66 KCPYIVNLFYSFQDMNHVYFIMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQY 125
P +V +ME++ + + L E ++ + V+
Sbjct: 133 SVPQPYTYM------KNV-LLMEFIGEDELPAPTLVELGRELKELDVEGIFNDVVENVKR 185
Query: 126 LHG-LGYVHRDIKPDNMLLSATGHLKLTDFGSATQVD 161
L+ VH D+ N++ + D G A +
Sbjct: 186 LYQEAELVHADLSEYNIMY--IDKVYFIDMGQAVTLR 220
>2qag_C Septin-7; cell cycle, cell division, GTP-binding,
nucleotide-binding, phosphorylation, acetylation,
alternative splicing, coiled coil; HET: GDP GTP; 4.00A
{Homo sapiens}
Length = 418
Score = 32.1 bits (72), Expect = 0.71
Identities = 21/117 (17%), Positives = 50/117 (42%), Gaps = 5/117 (4%)
Query: 370 AKASLEDLSCSRTRVLALQAQVSSLQQDLTSHTSLLSKKEEEIDRLRQEMVK-KESDLVA 428
A + + ++ + ++ ++ ++++ H + + K E E++++ + VK K L
Sbjct: 296 AAVTYNGVDNNKNKGQLTKSPLAQMEEERREHVAKMKKMEMEMEQVFEMKVKEKVQKLKD 355
Query: 429 TSSDLVATR----HELEEVRSELKEKENLEKTDDRKLEVCEVSKELEVLRGELEEQK 481
+ ++L LE EL+EK + + E + E + LE+ K
Sbjct: 356 SEAELQRRHEQMKKNLEAQHKELEEKRRQFEDEKANWEAQQRILEQQNSSRTLEKNK 412
>1yc9_A VCEC, multidrug resistance protein; outer membrane protein,
multidrug resistanc membrane protein; HET: BOG; 1.80A
{Vibrio cholerae}
Length = 442
Score = 32.3 bits (74), Expect = 0.73
Identities = 17/136 (12%), Positives = 43/136 (31%), Gaps = 16/136 (11%)
Query: 328 SYTGEPMGANTNTSSDSTLPPSSE-DMRHWKRDRLQLLQQLAEAKASLEDLSCSRTRVLA 386
Y N TL + D W ++R ++ +E A+ + L
Sbjct: 88 RYQSATPPDGWNDYGTLTLNFQYDFDF--WGKNRAAVVAATSELAAAEAES---VAARLM 142
Query: 387 LQAQVSS---------LQQDLTSHTSLLSKKEEEIDRLRQEM-VKKESDLVATSSDLVAT 436
+ +++ Q+ + K E+ R ++ + + +
Sbjct: 143 ISTSIANAYAELARLYANQETVHAALQVRNKTVELLEKRYANGLETLGSVSQAKAVAASV 202
Query: 437 RHELEEVRSELKEKEN 452
EL ++ ++ ++N
Sbjct: 203 EAELLGIQESIQLQKN 218
>3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural
prote intermediate filament, crosslinking; 2.95A {Homo
sapiens}
Length = 283
Score = 31.6 bits (71), Expect = 0.79
Identities = 31/202 (15%), Positives = 68/202 (33%), Gaps = 2/202 (0%)
Query: 496 KERNAAVAELKQAQTENEALKEKLTSLEQELKVSEEALATAQNSLDSKLREHQALSNTIE 555
KE + T A KE ++L +EL++ E+ + QN+ D LRE T+E
Sbjct: 27 KEEEEVGFDWSDRNTNMTAKKESYSALMRELELKEKKIKELQNAGDRLLREDHPARPTVE 86
Query: 556 SMQKEMEQSAVRVREMSGISEKYEKDRKTLLELKSAKERLELEVRGYKLDLESTRRELET 615
S Q ++ + ++ E + K+ + S E +++ + L +
Sbjct: 87 SFQAALQTQWSWMLQLCCCIEAHLKENAAYFQFFSDVREAEGQLQKLQEALRRKYSCDRS 146
Query: 616 NKDQTIELRAKSKLEKAEGELTTVREENKKLKQGKIRLVYSLFKDPQPAQSKLEKAEGEL 675
+E + + + +L + L + +V + P +
Sbjct: 147 ATVTRLEDLLQ-DAQDEKEQLNEYKGHLSGLAKRAKAVVQLKPRHPAHPMRGRLPLL-AV 204
Query: 676 TTVREENKKLKVSFFFTLESNS 697
++ + L +
Sbjct: 205 CDYKQVEVTVHKGDECQLVGPA 226
>3sks_A Putative oligoendopeptidase F; structural genomics, center for
structural genomics of infec diseases, csgid, protease,
hydrolase; 2.05A {Bacillus anthracis}
Length = 567
Score = 32.0 bits (73), Expect = 0.82
Identities = 25/223 (11%), Positives = 63/223 (28%), Gaps = 37/223 (16%)
Query: 431 SDLVATRHELEEVRSELKEKENLEKTDDRKLEVCEVSKELEVLRGELEEQKT-----ATK 485
D R +EE++ + E +V + +R + +
Sbjct: 7 KDYEYKRPNIEELKEKFTVALEKFDNAKTVEEQKQVIHSINEIRNDFGTMGNLCYIRHSV 66
Query: 486 QWKKDWYQSVKER----------------NAAVAELKQAQTENEALKEKLTSLEQELKVS 529
+Y+ ++ NA + + + E K+ E +LK
Sbjct: 67 DTTDAFYKEEQDFFDEFSPVVQGYGTKYYNALIHSPFREELEAYYGKQLFALAECDLKTY 126
Query: 530 EEALATAQNSLDSKLREHQALSN-----------TIESMQKEMEQSAVRVRE--MSGISE 576
+ + + ++ L T+ + M+ R+
Sbjct: 127 SDEVVKDLQLENKLSSQYTQLLASAKIDFAGEERTLSQLIPFMQGKERSERKAASEAYYG 186
Query: 577 KYEKDRKTLLEL--KSAKERLEL-EVRGYKLDLESTRRELETN 616
++ + L + + K R ++ + G+K +E +
Sbjct: 187 FLAENEEELDRIYDELVKVRTKIAKSLGFKNFVELGYARMYRT 229
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase,
aminoglycoside, phosphorylation, transferase-antibiotic
complex; HET: TOY; 1.80A {Enterococcus casseliflavus}
PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A*
3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A*
4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Length = 304
Score = 31.7 bits (72), Expect = 0.92
Identities = 8/30 (26%), Positives = 13/30 (43%), Gaps = 4/30 (13%)
Query: 132 VHRDIKPDNMLLSATGHLKLT---DFGSAT 158
+H D D++L + + DFG A
Sbjct: 194 IHNDFSSDHILFDTEKN-TICGIIDFGDAA 222
>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA
complex, transcription/DNA complex; HET: DNA; 2.00A
{Schizosaccharomyces pombe} SCOP: h.1.3.1
Length = 70
Score = 29.2 bits (65), Expect = 0.94
Identities = 12/46 (26%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 747 RSESYCKEMVEYLETLQKNNDILSHDNEQLRKKNNDILSHDNEQLR 792
R E + K + + TL++ + + +N+QLR+K L + L+
Sbjct: 26 RKEDHLKALETQVVTLKELHSSTTLENDQLRQKVRQ-LEEELRILK 70
>3fhn_A Protein transport protein TIP20; TIP20P, vesicle tethering,
endoplasmic reticulum, ER-golgi transport, membrane,
phosphoprotein; 3.00A {Saccharomyces cerevisiae}
Length = 706
Score = 31.8 bits (71), Expect = 0.96
Identities = 18/182 (9%), Positives = 57/182 (31%), Gaps = 3/182 (1%)
Query: 451 ENLEKTDDRKLEVCEVSKELEVLRGELEEQKTATKQWKKDWYQSVKERNAAVAELKQAQT 510
++ DD + + K+++ R EL + KQ V ++ +
Sbjct: 4 GSMNGIDDLL-NINDRIKQVQNERNELASKLQNLKQSLASNDTEVALSEVIAQDIIEVGA 62
Query: 511 ENEALKEKLTSL-EQELKVSEEALATAQNSLDSKLREHQALSNTIESMQKEMEQSAVRVR 569
E L++ + ++ E +A Q + + + + + ++ + ++ +
Sbjct: 63 SVEGLEQLRAKYGDLQILNKLEKVAVQQTQMQAGVDKLDSFERQLDELAEQPPDQFT-LD 121
Query: 570 EMSGISEKYEKDRKTLLELKSAKERLELEVRGYKLDLESTRRELETNKDQTIELRAKSKL 629
++ + K T+ ++ + + + + KL
Sbjct: 122 DVKALHSKLTSVFATVPQINNIDSQYAAYNKLKSKVTGKYNDVIIQRLATNWSNTFDQKL 181
Query: 630 EK 631
+
Sbjct: 182 LE 183
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside
phosphotransferase, antibiotic resistance; HET: MES PG4;
1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A*
3q2m_A*
Length = 339
Score = 31.6 bits (71), Expect = 1.0
Identities = 8/43 (18%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Query: 116 IYELAQAVQYLHG-LGYVHRDIKPDNMLLSATGHLKLTDFGSA 157
+L++ +Q H DI N+L+ + + D+
Sbjct: 192 SEKLSKKIQPDLDKYVLCHSDIHAGNVLVGNEESIYIIDWDEP 234
>1nkp_B MAX protein, MYC proto-oncogene protein; transcription, DNA, BHLHZ,
heterodimer, transcription/DNA complex; 1.80A {Homo
sapiens} SCOP: a.38.1.1 PDB: 1an2_A* 1r05_A 1nlw_B
Length = 83
Score = 29.3 bits (66), Expect = 1.0
Identities = 8/37 (21%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 756 VEYLETLQKNNDILSHDNEQLRKKNNDILSHDNEQLR 792
EY++ +++ N D + L+++ N +L L
Sbjct: 46 TEYIQYMRRKNHTHQQDIDDLKRQ-NALLEQQVRALG 81
>2xdj_A Uncharacterized protein YBGF; unknown function; 1.82A {Escherichia
coli} PDB: 2wz7_A
Length = 83
Score = 29.2 bits (65), Expect = 1.1
Identities = 11/58 (18%), Positives = 27/58 (46%)
Query: 514 ALKEKLTSLEQELKVSEEALATAQNSLDSKLREHQALSNTIESMQKEMEQSAVRVREM 571
++++++T LE+ + L Q L + +L I+ Q ++ Q R +++
Sbjct: 3 SVEDRVTQLERISNAHSQLLTQLQQQLSDNQSDIDSLRGQIQENQYQLNQVVERQKQI 60
>1qvr_A CLPB protein; coiled coil, AAA ATPase, chaperone; HET: ANP; 3.00A
{Thermus thermophilus} SCOP: a.174.1.1 c.37.1.20
c.37.1.20
Length = 854
Score = 31.4 bits (72), Expect = 1.3
Identities = 34/166 (20%), Positives = 58/166 (34%), Gaps = 47/166 (28%)
Query: 531 EALATAQNSLDSKLREHQALSNTIESMQKEMEQSAVRVREMSGISEKYEKDRKTLLELKS 590
EA A + +L+S E AL +Q E+E+ A+ K EKD
Sbjct: 387 EAAARLRMALESAPEEIDALERKK--LQLEIEREAL----------KKEKD-------PD 427
Query: 591 AKERLELEVRGYKLDLESTRRELETNKDQTIELRAKSKLEKAEGELTTVREENKKLKQGK 650
++ERL+ + E+ ++ +LRA+ + E+ L +RE +L + +
Sbjct: 428 SQERLK-----------AIEAEIAKLTEEIAKLRAEWERERE--ILRKLREAQHRLDEVR 474
Query: 651 I---------------RLVYSLFKDPQPAQSKLEKAEGELTTVREE 681
L Y + L + VR E
Sbjct: 475 REIELAERQYDLNRAAELRYGELPKLEAEVEALSEKLRGARFVRLE 520
Score = 28.7 bits (65), Expect = 8.9
Identities = 32/155 (20%), Positives = 61/155 (39%), Gaps = 61/155 (39%)
Query: 505 LKQAQTENEALK--------EKLTSLEQELKVSEEALATAQNSLDSKLREHQALSNTIES 556
Q + E EALK E+L ++E E+ +KL E
Sbjct: 410 KLQLEIEREALKKEKDPDSQERLKAIEAEI---------------AKLTE---------- 444
Query: 557 MQKEMEQSAVRVREMSGISEKYEKDRKTLLELKSAKERLELEVRGYKLDLESTRRELETN 616
E++ + ++E++R+ L +L+ A+ RL+ + ++E R+ + N
Sbjct: 445 -------------EIAKLRAEWEREREILRKLREAQHRLD----EVRREIELAERQYDLN 487
Query: 617 KDQTIELR------AKSKLEKAEGELTT---VREE 642
+ ELR ++++E +L VR E
Sbjct: 488 R--AAELRYGELPKLEAEVEALSEKLRGARFVRLE 520
>2v0o_A FCHO2, FCH domain only protein 2; lipid-binding protein, EFC
domain, vesicle trafficking, membrane curvature,
endocytosis, exocytosis, F-BAR domain; 2.30A {Homo
sapiens}
Length = 276
Score = 30.8 bits (69), Expect = 1.4
Identities = 34/231 (14%), Positives = 93/231 (40%), Gaps = 6/231 (2%)
Query: 349 SSEDMRHWKRDRLQL----LQQLAEAKASLEDLSCSRTRVLALQAQVSSLQQDLTSHTSL 404
S++++ + R+R + + + + S + S T +S ++ H L
Sbjct: 33 STKELADFVRERATIEEAYSRSMTKLAKSASNYSQLGTFAPVWDVFKTSTEKLANCHLDL 92
Query: 405 LSKKEEEIDRLRQEMVKKESDLVATSSDLVATRHELEEVRSELKEKENLEKTDDRKLEVC 464
+ K +E I +++ ++ T ++ T ++ ++S + + ++ + K
Sbjct: 93 VRKLQELIKEVQKYGEEQVKSHKKTKEEVAGTLEAVQTIQSITQALQKSKENYNAKCVEQ 152
Query: 465 EVSKELEVLRGELEEQKTATKQWKKDWYQSVKERNAAVAELKQAQTE-NEALKEKLTSLE 523
E K+ + E+E+ +K+ + V++ A A+ +Q TE + ++ +
Sbjct: 153 ERLKKEGATQREIEKAAVKSKKATDTYKLYVEKYALAKADFEQKMTETAQKFQDIEETHL 212
Query: 524 QELKVSEEALATAQNSLDSKLRE-HQALSNTIESMQKEMEQSAVRVREMSG 573
+K +L+ A + ++ + H+ N + + E + +G
Sbjct: 213 IHIKEIIGSLSNAIKEIHLQIGQVHEEFINNMANTTVESLIQKFAESKGTG 263
Score = 28.9 bits (64), Expect = 6.0
Identities = 26/182 (14%), Positives = 65/182 (35%), Gaps = 6/182 (3%)
Query: 431 SDLVATRHELEEVRSELKEKENLEKTDDRKLEVCEVSKELEVLRGELEEQKTATKQWKKD 490
+D V R +EE S + L K+ ++ + +V + E+ +
Sbjct: 38 ADFVRERATIEEAYS--RSMTKLAKSASNYSQLGTFAPVWDVFKTSTEKLANCHLDLVRK 95
Query: 491 WYQSVKERNAAVAELKQAQTENEALKEKLTSLEQELKVSEEALATAQNSLDSKLREHQAL 550
+ +KE E ++ + + Q ++ +AL ++ + ++K E + L
Sbjct: 96 LQELIKEVQKYGEEQVKSHKKTKEEVAGTLEAVQTIQSITQALQKSKENYNAKCVEQERL 155
Query: 551 SNTIESMQKEMEQSAVRVREMSGISEKYEKDRKTLLELKSAKERLELEVRGYKLDLESTR 610
+ ++ + + + ++ Y+ + K+ E+ E D+E T
Sbjct: 156 KKEGATQREIEKAAV----KSKKATDTYKLYVEKYALAKADFEQKMTETAQKFQDIEETH 211
Query: 611 RE 612
Sbjct: 212 LI 213
>1u5p_A Spectrin alpha chain, brain; alpha spectrin, two repeats of
spectrin, alpha-helical linker region, 3-helix coiled
coil, structural protein; 2.00A {Gallus gallus} SCOP:
a.7.1.1 a.7.1.1
Length = 216
Score = 30.7 bits (69), Expect = 1.4
Identities = 22/184 (11%), Positives = 63/184 (34%), Gaps = 22/184 (11%)
Query: 385 LALQAQVSSLQQDLTSHTSLLSKKEEEIDRLRQEMVKKESDLVATSSDLVATRHELEEVR 444
+A + Q + + LS+ E + DL + + L++ +
Sbjct: 1 MANKQQ--NFNTGIKDFDFWLSEVEALLASE------------DYGKDLASVNNLLKKHQ 46
Query: 445 SELKEKENLEKTDDRKLEVCEVSKELEVLRG----ELEEQKTATKQWKKDWYQSVKERNA 500
+ E DR ++ + L ++++++ + R A
Sbjct: 47 LLEADISAHE---DRLKDLNSQADSLMTSSAFDTSQVKDKRETINGRFQRIKSMAAARRA 103
Query: 501 AVAELKQAQTENEALKEKLTSL-EQELKVSEEALATAQNSLDSKLREHQALSNTIESMQK 559
+ E + + ++ + + E++L VS E + + ++H+ L + + +
Sbjct: 104 KLNESHRLHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEP 163
Query: 560 EMEQ 563
++
Sbjct: 164 AIQG 167
>3plt_A Sphingolipid long chain base-responsive protein L; eisosomes, LSP1,
PIL1, BAR domain, plasma membrane, SELF-ASS
phosphoprotein; 2.90A {Saccharomyces cerevisiae}
Length = 234
Score = 30.8 bits (69), Expect = 1.5
Identities = 30/146 (20%), Positives = 53/146 (36%), Gaps = 15/146 (10%)
Query: 411 EIDRLRQEMVKKESDLVATSSDLVATRHELEEVRSELKEKENLEKTDDRKLEVCEVSKEL 470
E+ R ++VK E ++ + + R E + S DD +V + L
Sbjct: 20 ELARKLSQLVKTEKGVLRAMEVVASERREAAKQLSLWGADN-----DDDVSDVTDKLGVL 74
Query: 471 EVLRGELEEQKTATKQWKKDWYQSVKERNAAVAELK----------QAQTENEALKEKLT 520
GEL++Q + +S++ A+V + + K+
Sbjct: 75 IYELGELQDQFIDKYDQYRVTLKSIRNIEASVQPSRDRKEKITDEIAHLKYKDPQSTKIP 134
Query: 521 SLEQELKVSEEALATAQNSLDSKLRE 546
LEQEL +E A+ L + RE
Sbjct: 135 VLEQELVRAEAESLVAEAQLSNITRE 160
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol
3-phosphate binding, membrane protein; HET: ITP; 2.20A
{Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A*
1hyj_A
Length = 125
Score = 29.5 bits (66), Expect = 1.6
Identities = 15/57 (26%), Positives = 25/57 (43%)
Query: 509 QTENEALKEKLTSLEQELKVSEEALATAQNSLDSKLREHQALSNTIESMQKEMEQSA 565
Q E AL E+ E E++ + + Q LD+ Q L +S+Q + Q+
Sbjct: 3 QDERRALLERCLKGEGEIEKLQTKVLELQRKLDNTTAAVQELGRENQSLQIKHTQAL 59
>3v71_A PUF (pumilio/FBF) domain-containing protein 7, CO transcript
evidence; PUF repeats, RNA binding protein-RNA complex;
HET: EPE; 2.90A {Caenorhabditis elegans}
Length = 382
Score = 30.8 bits (69), Expect = 1.7
Identities = 14/107 (13%), Positives = 38/107 (35%), Gaps = 16/107 (14%)
Query: 14 ASDFDIKRFIQQGNFGDIYLVEEKQSHNTFVMKKVLREKMPNTIERDIMVKSKCPYIVNL 73
A+ + + ++Q G + + K V++ L +K ++ ++ + + +
Sbjct: 82 ATPAEQRELLRQMIDGGLLAMC-KDKFACRVVQLAL-QKFDHSNVFQLIQELSTFDLAAM 139
Query: 74 FYSFQDMNHV-------------YFIMEYVTGGDFVTLLENQPHGYL 107
Q HV F + +++ GD + + +G
Sbjct: 140 CTD-QISIHVIQRVVKQLPVDMWTFFVHFLSSGDSLMAVCQDKYGCR 185
>2j5u_A MREC protein; bacterial cell shape determining protein MREC, cell
shape regulation; 2.5A {Listeria monocytogenes}
Length = 255
Score = 30.5 bits (69), Expect = 1.7
Identities = 16/67 (23%), Positives = 27/67 (40%), Gaps = 5/67 (7%)
Query: 493 QSVKERNAAVAELKQAQTENEALKEKLTSLEQELKVSEEALATAQNSLDSKLREHQALSN 552
+ V +LK TEN+ LKE+L L Q + +N L+E +++
Sbjct: 9 SFISGAVDGVVDLKNTYTENQHLKERLEELAQLESEVAD--LKKEN---KDLKESLDITD 63
Query: 553 TIESMQK 559
+I
Sbjct: 64 SIRDYDP 70
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn
complex, rRNA processing, transferase; HET: ADP; 1.75A
{Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB:
1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Length = 282
Score = 30.7 bits (69), Expect = 1.9
Identities = 13/76 (17%), Positives = 28/76 (36%), Gaps = 10/76 (13%)
Query: 86 IMEYVTGGDFVTLLENQPHGYLSESKARFYIYELAQAVQYLHGLGYVHRDIKPDNMLLSA 145
+ME + + + + + + V + G VH D+ N+L+S
Sbjct: 178 LMELIDA---------KELYRVRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS- 227
Query: 146 TGHLKLTDFGSATQVD 161
+ + DF + +V
Sbjct: 228 EEGIWIIDFPQSVEVG 243
>1zbt_A RF-1, peptide chain release factor 1; peptide chain release factor
1 (RF-1), structural joint center for structural
genomics, JCSG; 2.34A {Streptococcus mutans}
Length = 371
Score = 30.6 bits (70), Expect = 2.0
Identities = 14/82 (17%), Positives = 29/82 (35%), Gaps = 20/82 (24%)
Query: 448 KEKENLEKTDDRKLEVCEVSKELEVLRGELEEQKTATKQWKKDWYQSVKERNAAVAELKQ 507
+E+ N E V +E + + + + + K D EL++
Sbjct: 50 REEANSR-------ETVAVYREYKQVVQNIADAQEMIKDASGD------------PELEE 90
Query: 508 -AQTENEALKEKLTSLEQELKV 528
A+ E + K E++L+
Sbjct: 91 MAKEELKNSKVAKEEYEEKLRF 112
>4dvy_P Cytotoxicity-associated immunodominant antigen; oncoprotein; 3.30A
{Helicobacter pylori}
Length = 877
Score = 31.0 bits (69), Expect = 2.1
Identities = 55/292 (18%), Positives = 104/292 (35%), Gaps = 44/292 (15%)
Query: 488 KKDWYQSVKERNAAVAELKQAQTENEALKEKLTSLEQELKVSEEALATAQNSLDSKLREH 547
KD+ S KE +A E K T E+K +++ L + + +E
Sbjct: 579 IKDFLSSNKELAGKALNFNKAVAE-----AKSTGNYDEVKKAQKDLEKSLRKREHLEKEV 633
Query: 548 QALSNTIESMQKEMEQSAVRVREMSGISEKYEKDRKTLLELKSAKERLELEVRGYKLDLE 607
+ + + +ME A +KD + L + + + Y +L+
Sbjct: 634 EKKLESKSGNKNKMEAKA---------QANSQKDE--IFALINKEANRDARAIAYTQNLK 682
Query: 608 STRRELETNKDQTIELRAKSKLEKAEGELTTVREENKKLKQGKIRLVYSLFKDPQPAQSK 667
+REL KLEK +L + + K GK +
Sbjct: 683 GIKREL------------SDKLEKISKDLKDFSKSFDEFKNGKNK--------------D 716
Query: 668 LEKAEGELTTVREENKKLKVSFFFTLESNSLFWLDPNTFLSSLEDLKSNYTERESKLRSA 727
KAE L ++ K L ++ + + +L N F + S T+ +S L ++
Sbjct: 717 FSKAEETLKALKGSVKDLGINPEWISKVENLN-AALNEFKNGKNKDFSKVTQAKSDLENS 775
Query: 728 NEIIGEYETKITALESTMTRSESYCKEMVEYLETLQKNNDILSHDNEQLRKK 779
+ + K+T + ++ S K M ++ Q D+ + EQL ++
Sbjct: 776 VKDVII-NQKVTDKVDNLNQAVSVAKAMGDFSRVEQVLADLKNFSKEQLAQQ 826
Score = 29.1 bits (64), Expect = 7.2
Identities = 35/190 (18%), Positives = 68/190 (35%), Gaps = 14/190 (7%)
Query: 350 SEDMRHWKRDRLQLLQQLAEAKASLE-DLSCSRTRVLALQAQVSSLQQDLTSHTSLLSKK 408
S+ + +D + E K D S + + AL+ V L + S +
Sbjct: 689 SDKLEKISKDLKDFSKSFDEFKNGKNKDFSKAEETLKALKGSVKDLGIN-PEWISKVENL 747
Query: 409 EEEIDRLRQEMVKKESDLVATSSDLVATRHELEEVRSELKEKENLEKT---DDRKLEVCE 465
++ + K S + SDL + ++ + + +NL + +
Sbjct: 748 NAALNEFKNGKNKDFSKVTQAKSDLENSVKDVIINQKVTDKVDNLNQAVSVAKAMGDFSR 807
Query: 466 VSKELEVLRGELEEQKTATKQWKK--------DWYQSVKER-NAAVAELKQAQTENEALK 516
V + L L+ +EQ Q + + YQSVK N + + E AL
Sbjct: 808 VEQVLADLKNFSKEQLAQQAQKNEDFNTGKNSELYQSVKNSVNKTLVGNGLSGIEATALA 867
Query: 517 EKLTSLEQEL 526
+ + +++EL
Sbjct: 868 KNFSDIKKEL 877
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha
beta protein, rigid helical backbon substrate-free, heme
transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Length = 255
Score = 30.3 bits (69), Expect = 2.2
Identities = 12/61 (19%), Positives = 22/61 (36%)
Query: 650 KIRLVYSLFKDPQPAQSKLEKAEGELTTVREENKKLKVSFFFTLESNSLFWLDPNTFLSS 709
KI V + + Q +E + L V + +KV F + + NT +
Sbjct: 100 KINAVATALHQTEKGQKLIEDYQQRLAAVNKTPLPVKVLFVMSHGGLTPMAAGQNTAADA 159
Query: 710 L 710
+
Sbjct: 160 M 160
>3pdy_A Plectin; cytoskeleton, plakin, intermediate filament, spectrin
repeat structural protein, crosslinking; 2.22A {Homo
sapiens}
Length = 210
Score = 29.9 bits (67), Expect = 2.3
Identities = 42/211 (19%), Positives = 71/211 (33%), Gaps = 26/211 (12%)
Query: 353 MRHWKRDRLQLLQQLAEAKASLEDLSCSRTRVLALQAQVSSLQQDLTSHTSLLSKKEEEI 412
R LL + E + ++ + S++ L SH L EE
Sbjct: 7 EDSTLRYLQDLLAWVEENQHRVDGAEWGVD--------LPSVEAQLGSHRGLHQSIEEFR 58
Query: 413 DRLRQEMVKKESDLVATSSDLVATRHELEEVRSELKEKENLEKTDDRKLEVCEVSKELEV 472
++ + + AT L+ ++L L + R + LE
Sbjct: 59 AKIERARSDEGQLSPATRGAYRDCLGRLDLQYAKL-----LNSSKARL-------RSLES 106
Query: 473 LRGELEEQKTATKQWKKDWYQSVKERNAAVAELKQAQTENEALKEKLTSLEQELKVSEEA 532
L T W + KE + T A KE ++L +EL++ E+
Sbjct: 107 LH-SFVAAATKELMWLNE-----KEEEEVGFDWSDRNTNMTAKKESYSALMRELELKEKK 160
Query: 533 LATAQNSLDSKLREHQALSNTIESMQKEMEQ 563
+ QN+ D LRE T+ES Q ++
Sbjct: 161 IKELQNAGDRLLREDHPARPTVESFQAALQT 191
Score = 28.0 bits (62), Expect = 9.2
Identities = 21/141 (14%), Positives = 54/141 (38%), Gaps = 15/141 (10%)
Query: 440 LEEVRSELKEKENLEKTDDRKLEVCEVSKELEVLRGELEEQKTATKQWKKDWYQSVKERN 499
L V ++L L + + E ++E R + + AT+ +D + +
Sbjct: 37 LPSVEAQLGSHRGLHQ------SIEEFRAKIERARSDEGQLSPATRGAYRDCLGRLDLQY 90
Query: 500 AAVAELKQAQTEN-EALKEKLTSL--------EQELKVSEEALATAQNSLDSKLREHQAL 550
A + +A+ + E+L + + E+E + + ++ +K + AL
Sbjct: 91 AKLLNSSKARLRSLESLHSFVAAATKELMWLNEKEEEEVGFDWSDRNTNMTAKKESYSAL 150
Query: 551 SNTIESMQKEMEQSAVRVREM 571
+E +K++++ +
Sbjct: 151 MRELELKEKKIKELQNAGDRL 171
>3ibp_A Chromosome partition protein MUKB; structural maintenance of
chromosomes, SMC, condensin, chromosome segregation,
hinge, dimerization domain; 3.10A {Escherichia coli}
Length = 302
Score = 30.5 bits (68), Expect = 2.4
Identities = 18/97 (18%), Positives = 41/97 (42%), Gaps = 4/97 (4%)
Query: 493 QSVKERNAAVAELKQAQTENEALKEKLTSLEQELKVSEEALATAQNSLDSKLREH--QAL 550
+ + +V+ ++ + +E+L S Q L AQNSL ++L E +
Sbjct: 3 HMIASLSDSVSNAREERMALRQEQEQLQSRIQSLMQRAPVWLAAQNSL-NQLSEQCGEEF 61
Query: 551 SNTIESMQKEMEQSAVRVREMSGISEKYEKDRKTLLE 587
+++ + + ++Q R RE ++ + + E
Sbjct: 62 TSSQDVTE-YLQQLLEREREAIVERDEVGARKNAVDE 97
>2iak_A Bullous pemphigoid antigen 1, isoform 5; triple helical bundle,
spectrin repeat, cell adhesion; 3.00A {Mus musculus}
Length = 224
Score = 30.0 bits (67), Expect = 2.4
Identities = 34/215 (15%), Positives = 73/215 (33%), Gaps = 26/215 (12%)
Query: 349 SSEDMRHWKRDRLQLLQQLAEAKASLEDLSCSRTRVLALQAQVSSLQQDLTSHTSLLSKK 408
+ + + LL + E + L+ + S++ L +H ++
Sbjct: 18 NLTEEEVNMKFVQDLLNWVDEMQVQLDRTEWGSD--------LPSVESHLENHKNVHRAI 69
Query: 409 EEEIDRLRQEMVKKESDLVATSSDLVATRHELEEVRSELKEKENLEKTDDRKLEVCEVSK 468
EE L++ + + H LE ++L L + +++ +
Sbjct: 70 EEFESSLKEAKISEIQMTAPLKLSYTDKLHRLESQYAKL-----LNTSRNQE-------R 117
Query: 469 ELEVLRGELEEQKTATKQWKKDWYQSVKERNAAVAELKQAQTENEALKEKLTSLEQELKV 528
L+ L + T W + KE + + + + K L +EL+
Sbjct: 118 HLDTLH-NFVTRATNELIWLNE-----KEESEVAYDWSERNSSVARKKSYHAELMRELEQ 171
Query: 529 SEEALATAQNSLDSKLREHQALSNTIESMQKEMEQ 563
EE++ Q + L E+ TIE+ + M+
Sbjct: 172 KEESIKAVQEIAEQLLLENHPARLTIEAYRAAMQT 206
>3q8t_A Beclin-1; autophagy, ATG14L uvrag, apoptosis; 1.90A {Rattus
norvegicus}
Length = 96
Score = 28.4 bits (63), Expect = 2.5
Identities = 13/83 (15%), Positives = 38/83 (45%)
Query: 482 TATKQWKKDWYQSVKERNAAVAELKQAQTENEALKEKLTSLEQELKVSEEALATAQNSLD 541
+ ++Q +++ + E + EL+ + + + E L ++ E + ++ A Q
Sbjct: 4 SDSEQLQRELKELALEEERLIQELEDVEKNRKVVAENLEKVQAEAERLDQEEAQYQREYS 63
Query: 542 SKLREHQALSNTIESMQKEMEQS 564
R+ L + ++S++ +M +
Sbjct: 64 EFKRQQLELDDELKSVENQMRYA 86
Score = 28.0 bits (62), Expect = 4.2
Identities = 16/92 (17%), Positives = 38/92 (41%)
Query: 469 ELEVLRGELEEQKTATKQWKKDWYQSVKERNAAVAELKQAQTENEALKEKLTSLEQELKV 528
+ E L+ EL+E ++ ++ K R L++ Q E E L ++ ++E
Sbjct: 5 DSEQLQRELKELALEEERLIQELEDVEKNRKVVAENLEKVQAEAERLDQEEAQYQREYSE 64
Query: 529 SEEALATAQNSLDSKLREHQALSNTIESMQKE 560
+ + L S + + ++ ++K+
Sbjct: 65 FKRQQLELDDELKSVENQMRYAQMQLDKLKKK 96
>3edu_A Beta-I spectrin, spectrin beta chain, erythrocyte; ankyrin,
ankyrin-binding domain, actin capping, AC binding,
cytoskeleton, disease mutation; 2.10A {Homo sapiens}
PDB: 3f57_A
Length = 218
Score = 30.0 bits (67), Expect = 2.6
Identities = 11/90 (12%), Positives = 36/90 (40%), Gaps = 1/90 (1%)
Query: 349 SSEDMRHWKRDRLQLLQQLAEAKASL-EDLSCSRTRVLALQAQVSSLQQDLTSHTSLLSK 407
+S D+ + ++L + E L ED+ + + ++ +++L + +
Sbjct: 106 ASYDLHRYFYTGAEILGLIDEKHRELPEDVGLDASTAESFHRVHTAFERELHLLGVQVQQ 165
Query: 408 KEEEIDRLRQEMVKKESDLVATSSDLVATR 437
++ RL+ ++++ + V+
Sbjct: 166 FQDVATRLQTAYAGEKAEAIQNKEQEVSAA 195
Score = 28.0 bits (62), Expect = 9.4
Identities = 29/205 (14%), Positives = 68/205 (33%), Gaps = 23/205 (11%)
Query: 389 AQVSSLQQDLTSHTSLLSKKEEEIDRLRQEMVKKESDLVATSSDLVATRH----ELEEVR 444
A + QD T L K + ++ ++ A L+ H + E +
Sbjct: 24 ASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNAFIERLIDAGHSEAATIAEWK 83
Query: 445 SELKEK-ENLEKTDDRKLEVCEVSKELEVLRGELEEQKTATKQWKKDWYQSVKERNAAVA 503
L E +L + D ++++ S +L E + ++ + E
Sbjct: 84 DGLNEMWADLLELIDTRMQLLAASYDLHRYFYTGAE----ILGLIDEKHRELPE------ 133
Query: 504 ELKQAQTENEALKEKLTSLEQELKVSEEALATAQNSLDSKLRE-HQALSNTIESMQKEME 562
++ + E+ T+ E+EL + + Q+ + I++ ++E+
Sbjct: 134 DVGLDASTAESFHRVHTAFERELHLLGVQVQQFQDVATRLQTAYAGEKAEAIQNKEQEVS 193
Query: 563 QSAVRVREMSGISEKYEKDRKTLLE 587
+ + + R+T L
Sbjct: 194 AAWQALLDAC-------AGRRTQLV 211
>3m9b_A Proteasome-associated ATPase; coil COIL with 5 beta-strand barrel
inter domain, chaperone; 3.94A {Mycobacterium
tuberculosis} PDB: 3m9d_A
Length = 251
Score = 30.2 bits (67), Expect = 2.7
Identities = 16/90 (17%), Positives = 34/90 (37%), Gaps = 4/90 (4%)
Query: 330 TGEPMGANTNTSSDSTLPPSSEDMRHWKRDRLQLLQQLAEAKASLEDLSCSRTRVLALQA 389
E G ++ S E +R +L++ E + S + L+A
Sbjct: 6 RSEAFGIPRDSPLSSGDAAELEQLR----REAAVLREQLENAVGSHAPTRSARDIHQLEA 61
Query: 390 QVSSLQQDLTSHTSLLSKKEEEIDRLRQEM 419
++ SL + L + +++ LR+E+
Sbjct: 62 RIDSLAARNSKLMETLKEARQQLLALREEV 91
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase,
kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP:
d.144.1.6
Length = 264
Score = 30.0 bits (67), Expect = 2.8
Identities = 7/41 (17%), Positives = 11/41 (26%)
Query: 118 ELAQAVQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSAT 158
L + L H D N+++ D G
Sbjct: 173 RLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint,
cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens}
SCOP: h.1.22.1
Length = 100
Score = 28.5 bits (63), Expect = 2.8
Identities = 18/90 (20%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Query: 435 ATRHELEEVRSELKEKENLEKTDDRKLEVCEVSKELEVLRGELEEQKTATKQWKKDWYQS 494
+R E + +R +++E E + + + E E L+G+ ++ +T +
Sbjct: 9 FSREEADTLRLKVEELEGERSRLEEEKRMLEAQLERRALQGDYDQSRTKVLHMSLNPTSV 68
Query: 495 VKERNAAVAELKQAQTENEALKEKLTSLEQ 524
++R + Q Q E E L+ L ++E+
Sbjct: 69 ARQRLRE--DHSQLQAECERLRGLLRAMER 96
>3lbx_A Spectrin alpha chain, erythrocyte; tetramer, complex, three-helix
bundle, alpha helix repeat, helical linker, actin
capping; 2.80A {Homo sapiens} PDB: 1owa_A
Length = 161
Score = 29.1 bits (65), Expect = 2.9
Identities = 17/127 (13%), Positives = 49/127 (38%), Gaps = 7/127 (5%)
Query: 445 SELKEKENLEKTDDRKLEVCEVSKELEVLRGELEEQKTATKQWKKDWYQSVKERNAAVAE 504
S +++ + +V E ++E++ R E+ + + K+ V ER + +
Sbjct: 2 SGMEQFPKETVVESSGPKVLETAEEIQERRQEVLTRYQSFKER-------VAERGQKLED 54
Query: 505 LKQAQTENEALKEKLTSLEQELKVSEEALATAQNSLDSKLREHQALSNTIESMQKEMEQS 564
Q + + +++ + + ++ K ++HQ+L +++ + M +
Sbjct: 55 SYHLQVFKRDADDLGKWIMEKVNILTDKSYEDPTNIQGKYQKHQSLEAEVQTKSRLMSEL 114
Query: 565 AVRVREM 571
E
Sbjct: 115 EKTREER 121
>2no2_A HIP-I, huntingtin-interacting protein 1; clathrin light chain
binding, HIP1 coiled-coil domain, endocytosis, clathrin
SELF-assembly, cell adhesion; 2.80A {Homo sapiens}
Length = 107
Score = 28.7 bits (63), Expect = 3.0
Identities = 23/103 (22%), Positives = 44/103 (42%), Gaps = 1/103 (0%)
Query: 469 ELEVLRGELEEQKTATKQWKKDWYQSVKERNAAVAELK-QAQTENEALKEKLTSLEQELK 527
+L E+ +Q + +Q + D + KE ++ + Q Q + + E L SL+QEL
Sbjct: 5 DLLRKNAEVTKQVSMARQAQVDLEREKKELEDSLERISDQGQRKTQEQLEVLESLKQELA 64
Query: 528 VSEEALATAQNSLDSKLREHQALSNTIESMQKEMEQSAVRVRE 570
S+ L Q SL++ + + ++KE +
Sbjct: 65 TSQRELQVLQGSLETSAQSEANWAAEFAELEKERDSLVSGAAH 107
>3b9o_A Alkane monoxygenase; LADA, alkane hydroxylase, monooxygenase,
plasmid, oxidoreductase; HET: FMN; 1.90A {Geobacillus
thermodenitrificans} PDB: 3b9n_A*
Length = 440
Score = 29.9 bits (68), Expect = 3.3
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Query: 170 VPVGTPEYVAPEVLEWMEGNHGSDGY 195
+ VGTP+ VA E+ +E G DG+
Sbjct: 351 LSVGTPKKVADEMQYLVE-EAGIDGF 375
>1zvu_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling,
decatenation, DNA bindi topology; 3.00A {Escherichia
coli}
Length = 716
Score = 29.9 bits (68), Expect = 3.8
Identities = 14/86 (16%), Positives = 31/86 (36%), Gaps = 22/86 (25%)
Query: 518 KLTSLEQELKVSEEALATAQNSLDSKLR-EHQALSNTIESMQK----EMEQSAVRVREMS 572
L LE+ K+R E L + +Q E + + + +E+
Sbjct: 398 HLAKLEEM-----------------KIRGEQSELEKERDQLQGILASERKMNNLLKKELQ 440
Query: 573 GISEKYEKDRKTLLELKSAKERLELE 598
++ Y DR++ L+ + + +
Sbjct: 441 ADAQAYGDDRRSPLQEREEAKAMSEH 466
>1rq0_A RF-1, peptide chain release factor 1; X-RAY, crystal, peptide
release factor 1, ribosome, structural genomics, BSGC
structure funded by NIH; 2.65A {Thermotoga maritima}
SCOP: e.38.1.1 PDB: 2fvo_A
Length = 342
Score = 29.5 bits (67), Expect = 4.1
Identities = 14/64 (21%), Positives = 26/64 (40%), Gaps = 9/64 (14%)
Query: 465 EVSKELEVLRGELEEQKTATKQWKKDWYQSVKERNAAVAELKQAQTENEALKEKLTSLEQ 524
E ++EE + T + K+ +E + E + + E E +++L L Q
Sbjct: 24 NYGME----YAKIEEIENITNRIKE-----TQEFIELLREEGENELEIEKYEKELDQLYQ 74
Query: 525 ELKV 528
EL
Sbjct: 75 ELLF 78
>1tvl_A Protein YTNJ; beta-alpha barrel, structural genomics, PSI, protein
structu initiative, NEW YORK SGX research center for
structural GEN nysgxrc; 2.10A {Bacillus subtilis} SCOP:
c.1.16.4 PDB: 1yw1_A*
Length = 454
Score = 29.5 bits (67), Expect = 4.7
Identities = 9/24 (37%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
Query: 172 VGTPEYVAPEVLEWMEGNHGSDGY 195
+GTPE VA + W +DG+
Sbjct: 366 IGTPERVASLIETWFN-AEAADGF 388
>3sdo_A Nitrilotriacetate monooxygenase; seattle structural genomics center
for infectious disease, S oxidoreductase; 2.00A
{Burkholderia pseudomallei}
Length = 453
Score = 29.5 bits (67), Expect = 4.8
Identities = 10/24 (41%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
Query: 172 VGTPEYVAPEVLEWMEGNHGSDGY 195
+GTPE VA E++ W++ +DG+
Sbjct: 372 IGTPEAVASEMIRWVD-EGAADGF 394
>3fqd_A Protein DHP1, 5'-3' exoribonuclease 2; protein-protein complex,
exonuclease, hydrolase, mRNA proces nuclease, nucleus,
rRNA processing, transcription; 2.20A
{Schizosaccharomyces pombe}
Length = 899
Score = 29.7 bits (65), Expect = 4.8
Identities = 20/203 (9%), Positives = 67/203 (33%), Gaps = 1/203 (0%)
Query: 293 ENKFHKKDKRKASPSLKAFQKEGRYLDSALPLIGISYTGEPMGANTNTSSDSTLPPSSED 352
+ ++D+R + + ++ + +S + + I + E TSS ST +
Sbjct: 399 KRLKQQEDRRNENYRRRQQRESNQESESYVDNVVIQRSVETQSTEVVTSSKSTSVDTKPP 458
Query: 353 MRHWKRDRLQLLQQLAEAKASLE-DLSCSRTRVLALQAQVSSLQQDLTSHTSLLSKKEEE 411
+ K D + + ++ + L + ++ +A + S ++K
Sbjct: 459 KKTQKIDAPAPVDLVNLSEKTSNRSLGATNRELINNRAANRLGLSREAAAVSSVNKLAAS 518
Query: 412 IDRLRQEMVKKESDLVATSSDLVATRHELEEVRSELKEKENLEKTDDRKLEVCEVSKELE 471
+ + + ++ S ++ +E + + T + + +
Sbjct: 519 ALKAQLVSNETLQNVPLEDSIASSSAYEDTDSIESSTPVVHPIDTKVSNVGQKRKAPDST 578
Query: 472 VLRGELEEQKTATKQWKKDWYQS 494
+ + +++ +Y+
Sbjct: 579 EENENTDTVRLYEPGYRERYYEQ 601
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein,
developmental protein, structural protei
phosphorylation, transport, microtubule; 2.10A {Homo
sapiens}
Length = 111
Score = 28.0 bits (62), Expect = 5.0
Identities = 15/78 (19%), Positives = 28/78 (35%), Gaps = 4/78 (5%)
Query: 468 KELEVLRGELEEQKTATKQWKKDWYQSVKERNAAVA----ELKQAQTENEALKEKLTSLE 523
+ L+ + + K + K+ + V+ +L Q + E L + + LE
Sbjct: 3 QRNRDLQADNQRLKYEVEALKEKLEHQYAQSYKQVSVLEDDLSQTRAIKEQLHKYVRELE 62
Query: 524 QELKVSEEALATAQNSLD 541
Q E A SL+
Sbjct: 63 QANDDLERAKRATIVSLE 80
>1x8y_A Lamin A/C; structural protein, intermediate filament protein; 2.20A
{Homo sapiens} SCOP: h.1.20.1 PDB: 3v5b_A 3v4w_A 3v4q_A
Length = 86
Score = 27.2 bits (61), Expect = 5.1
Identities = 15/62 (24%), Positives = 24/62 (38%), Gaps = 11/62 (17%)
Query: 503 AELKQAQTENEALKEKLTSLEQELKVS-----------EEALATAQNSLDSKLREHQALS 551
+L Q Q + A + KL LE L E +A + + +L E+Q L
Sbjct: 3 CQLSQLQCQLAAKEAKLRDLEDSLARERDTSRRLLAEKEREMAEMRARMQQQLDEYQELL 62
Query: 552 NT 553
+
Sbjct: 63 DI 64
Score = 26.4 bits (59), Expect = 9.9
Identities = 12/48 (25%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Query: 376 DLSCSRTRVLALQAQVSSLQQ----DLTSHTSLLSKKEEEIDRLRQEM 419
LS + ++ A +A++ L+ + + LL++KE E+ +R M
Sbjct: 4 QLSQLQCQLAAKEAKLRDLEDSLARERDTSRRLLAEKEREMAEMRARM 51
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta
isoform; transferase, phosphoinositide 3-kinase, RTK;
HET: GD9; 3.30A {Mus musculus}
Length = 1092
Score = 29.5 bits (65), Expect = 5.2
Identities = 15/82 (18%), Positives = 34/82 (41%), Gaps = 10/82 (12%)
Query: 123 VQYLHGLGYVHRDIKPDNMLLSATGHLKLTDFGSATQVDK---NGRIKSIVPVGTPEYVA 179
Y+ G+G D DN+++ TG L DFG K + + + + T +++
Sbjct: 933 ASYVLGIG----DRHSDNIMVKKTGQLFHIDFGHILGNFKSKFGIKRERVPFILTYDFI- 987
Query: 180 PEVLEWMEGNHGSDGYTGSCDL 201
V++ + + ++ +
Sbjct: 988 -HVIQQGKTGN-TEKFGRFRQC 1007
>2zvf_A Alanyl-tRNA synthetase; C-terminal, oligomerization domain,
aminoacyl-tRNA synthetase, ATP-binding, cytoplasm,
ligase, nucleotide-binding; 3.20A {Archaeoglobus
fulgidus}
Length = 171
Score = 28.4 bits (64), Expect = 5.4
Identities = 9/72 (12%), Positives = 22/72 (30%), Gaps = 18/72 (25%)
Query: 355 HWKRDRLQLLQQLAEA-KASLEDLSCSRTRVLALQAQVSSLQQDLTSHTSLLSKKEEEID 413
+ +LL++ + + L V + ++ EI+
Sbjct: 7 EAVEEMERLLREASSILRVEPAKLP---KTVERFFEEWKDQRK--------------EIE 49
Query: 414 RLRQEMVKKESD 425
RL+ + +D
Sbjct: 50 RLKSVIADLWAD 61
>3iyk_A VP5; icosahedral virus; HET: MNA; 7.00A {Bluetongue virus}
Length = 526
Score = 29.2 bits (65), Expect = 5.7
Identities = 39/205 (19%), Positives = 90/205 (43%), Gaps = 20/205 (9%)
Query: 388 QAQVSSLQQDLTSHTSLLSKKEEEIDRLRQEMVKKESDLVATSSDLV-ATRHELEEVRSE 446
+ Q L + +TS+ +L++++ ++ RL + K+ + + +V R +++ +++
Sbjct: 145 EKQFDILNKAVTSYNKILTEEDLQMRRLATALQKEIGERTHAETVMVKEYRDKIDALKNA 204
Query: 447 LKEK------ENLEKTDDRKLEVCEVSKELEVLRGELEEQKTATKQWKKDWYQSVKERNA 500
++ + E +++ +V E + E L G AT + + Y+ K NA
Sbjct: 205 IEVERDGMQEEAIQEIAGMTADVLEAASEEVPLIGAGMATAVATGRAIEGAYKLKKVINA 264
Query: 501 A----VAELKQAQTENEALKEKLTSLEQELKVSEEALATAQNSLDSKLREHQALSNTIES 556
+ L+ + E + L +E + + ALA S+ SK R Q +
Sbjct: 265 LSGIDLTHLRTPKIEPSVVSTILEYRAKE--IPDNALA---VSVLSKNRAIQENHKELMH 319
Query: 557 MQKEM----EQSAVRVREMSGISEK 577
++ E+ +++ +E+ GI +K
Sbjct: 320 IKNEILPRFKKAMDEEKEICGIEDK 344
>2e7s_A RAB guanine nucleotide exchange factor SEC2; coiled coil,
endocytosis/exocytosis complex; 3.00A {Saccharomyces
cerevisiae} SCOP: h.1.33.1
Length = 135
Score = 28.3 bits (62), Expect = 5.8
Identities = 22/117 (18%), Positives = 47/117 (40%), Gaps = 1/117 (0%)
Query: 366 QLAEAKASLEDLSCSRTRVLALQAQVSSLQQDLTSHTSLLSKKEEEIDRLRQEMVKKESD 425
L + L + A + L++D + LS +++E+ RLR+++ K+
Sbjct: 2 PLGSLEEQLNKSLKTIASQKAAIENYNQLKEDYNTLKRELSDRDDEVKRLREDIAKENEL 61
Query: 426 LVATSSDLVATRHELEEVRSELKEKENLEKTDDRKLEVCEVSKELEVLRGELEEQKT 482
+ E+E++ + L ++ N D R E + + L +L E+
Sbjct: 62 RTKAEEEADKLNKEVEDLTASLFDEANNLVADARM-EKYAIEILNKRLTEQLREKDM 117
>1l4a_A Synaptobrevin; snare, snare complex, membrane fusion,
neurotransmission, endocytosis/exocytosis complex; 2.95A
{Loligo pealei} SCOP: h.1.15.1
Length = 80
Score = 27.2 bits (60), Expect = 5.9
Identities = 15/65 (23%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 433 LVATRHELEEVRSELKEKENLEKTDDRKLEVCEVSKELEVLRGELEE-QKTATKQWKKDW 491
L T+ ++EEV ++ N++K +R ++ E+ + L+ + + +A K +K W
Sbjct: 17 LQQTQAQVEEVVDIMRV--NVDKVLERDSKISELDDRADALQAGASQFEASAGKLKRKFW 74
Query: 492 YQSVK 496
+++ K
Sbjct: 75 WKNCK 79
>3dmq_A RNA polymerase-associated protein RAPA; SWF2/SNF2, transcription
factor, RNA polymerase recycling, activator,
ATP-binding, DNA-binding; 3.20A {Escherichia coli K12}
Length = 968
Score = 29.3 bits (65), Expect = 6.2
Identities = 20/118 (16%), Positives = 51/118 (43%), Gaps = 3/118 (2%)
Query: 426 LVATSSDLVATRHELEEVRSELKEKENLEKTDDRKLEVCEVSKELEVLRGELEEQKTATK 485
L+ + + +A + E E +L + +V L++ ++E+ A
Sbjct: 844 LLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARALI 903
Query: 486 QWKKDWYQSVKERNAAVAELKQAQTENEALK-EKLTSLEQELKVSEEALATAQNSLDS 542
++ ++ +A ++ L+ + N ++ ++LT++E + E+L A LD+
Sbjct: 904 DAARNEAD--EKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLDA 959
>3i2w_A Syndapin, LD46328P; EFC, FBAR, SH3 domain, endocytosis; 2.67A
{Drosophila melanogaster}
Length = 290
Score = 29.0 bits (64), Expect = 6.2
Identities = 17/150 (11%), Positives = 45/150 (30%), Gaps = 7/150 (4%)
Query: 619 QTIELRAKSKLEKAEGELTTVREENKKLKQGKIRLVYSLFKDPQPAQSKLEKAEGELTTV 678
E + ++ + V + K ++ K+ + + +KA+ +
Sbjct: 74 TESERISDVHMKIKDNLCNDVNSQIKTWQKENYHHTLMQIKERKDLEDLFKKAQKPWAKL 133
Query: 679 REENKKLKVSFFFTL----ESNSLFWLDPNTFLSSLEDLKSNYTERESKLRSANEIIGEY 734
+ +K K + + + S + +K + + + +Y
Sbjct: 134 LAKVEKAKADYHSACKTERSATNQERNANADSSLSPDQVKKMHDRVQKTKDQVQKCREKY 193
Query: 735 ETKITALESTMTRSESYCKEMVEYLETLQK 764
E I + + Y ++M E Q
Sbjct: 194 EQAIAEITKYNSV---YIEDMTSVFEKCQT 220
>2r7a_A Bacterial heme binding protein; periplasmic binding protein, heme
transport, transport protein; HET: HEM; 2.05A {Shigella
dysenteriae} PDB: 2rg7_A
Length = 256
Score = 28.7 bits (65), Expect = 6.6
Identities = 11/93 (11%), Positives = 31/93 (33%), Gaps = 6/93 (6%)
Query: 624 RAKSKLEKAEGELTTVREENKKLKQ--GKIRLVYSLFKDPQPAQSKLEKAEGELTTVREE 681
+L + + T+ L+Q IR + + P+ + + + L V++
Sbjct: 73 IVLDQLRAQKVNVVTLPRVPATLEQMYANIRQLAKTLQVPEQGDALVTQINQRLERVQQN 132
Query: 682 ----NKKLKVSFFFTLESNSLFWLDPNTFLSSL 710
+K F + ++ + ++
Sbjct: 133 VAAKKAPVKAMFILSAGGSAPQVAGKGSVADAI 165
>1w26_A Trigger factor, TF; chaperone, protein folding, ribosome associated
protein, nascent chain, cell division, isomerase; 2.7A
{Escherichia coli} SCOP: a.223.1.1 d.241.2.1 d.26.1.1
PDB: 2vrh_A 1w2b_5
Length = 432
Score = 29.2 bits (66), Expect = 6.6
Identities = 23/133 (17%), Positives = 47/133 (35%), Gaps = 25/133 (18%)
Query: 409 EEEIDRLRQEMVKKESDLVATSSDLVATRHELEEVR--------SELKEKENLEKTDDRK 460
+ EID LR++ ++ + +L E + R E+ L+ ++
Sbjct: 308 DSEIDVLRRQAAQRFGGNEKQALELPRELFEEQAKRRVVVGLLLGEVIRTNELKADEE-- 365
Query: 461 LEVCEVSKELEVLRGELEEQKTATKQWKKDWYQSVKERNAAVAELKQAQTENEA---LKE 517
V +E + E+ K ++Y KE + ++ E +A +
Sbjct: 366 ----RVKGLIEEMASAYEDPKE-----VIEFYSKNKEL---MDNMRNVALEEQAVEAVLA 413
Query: 518 KLTSLEQELKVSE 530
K E+E +E
Sbjct: 414 KAKVTEKETTFNE 426
>2yfa_A MCPS, methyl-accepting chemotaxis transducer; receptor,
chemoreceptor; 1.80A {Pseudomonas putida} PDB: 2yfb_A
Length = 258
Score = 28.7 bits (63), Expect = 7.0
Identities = 11/74 (14%), Positives = 26/74 (35%)
Query: 704 NTFLSSLEDLKSNYTERESKLRSANEIIGEYETKITALESTMTRSESYCKEMVEYLETLQ 763
+ L+ ++LK +++L+ + Y + + + EM +
Sbjct: 181 DAALADTDNLKRQLPSEDARLQQFENAVLAYRDAVRQFRDAVANITTSRAEMTVQGADIV 240
Query: 764 KNNDILSHDNEQLR 777
K +D L + R
Sbjct: 241 KRSDALYQIQLERR 254
>2whn_A PILC, pilus assembly protein PILC; transport, transmembrane, pilus
biogenesis, protein transpor; 2.05A {Thermus
thermophilus}
Length = 116
Score = 27.6 bits (62), Expect = 7.6
Identities = 18/91 (19%), Positives = 35/91 (38%), Gaps = 24/91 (26%)
Query: 509 QTENEALKEKLTSLEQELKVSEEALATAQNSLDSKLREHQALSNTIESMQKEMEQSAVRV 568
QTEN +E L + +++ + L +H+ S ++ VR
Sbjct: 42 QTENRKFREILKQVRTDVE--------GGMAFSEALSKHKIFSRLYVNL--------VRA 85
Query: 569 REMSG--------ISEKYEKDRKTLLELKSA 591
E SG ++ EK+ + +++SA
Sbjct: 86 GETSGGLDLILDRLASFLEKELELRGKIRSA 116
>1cun_A Protein (alpha spectrin); two repeats of spectrin, alpha helical
linker region, 2 tandem 3-helix coiled- coils,
structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1
a.7.1.1 PDB: 1aj3_A
Length = 213
Score = 28.4 bits (63), Expect = 8.1
Identities = 24/156 (15%), Positives = 58/156 (37%), Gaps = 6/156 (3%)
Query: 422 KESDLVATSSDLVATRHELEEVRSELKE-KENLEKTDDRKLEVCEVSKEL----EVLRGE 476
KE L+ +S D ++ +R + K + L + V + K+L + + E
Sbjct: 17 KEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQSVLDTGKKLSDDNTIGKEE 76
Query: 477 LEEQKTATKQWKKDWYQSVKERNAAVAELKQAQTENEALKEKLTSL-EQELKVSEEALAT 535
++++ K+ Q R + E + Q ++E+ + E+ V+ E
Sbjct: 77 IQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAWINEKMTLVASEDYGD 136
Query: 536 AQNSLDSKLREHQALSNTIESMQKEMEQSAVRVREM 571
++ L++H+A + + ++
Sbjct: 137 TLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDL 172
>2l7b_A Apolipoprotein E, APO-E; lipid transport, atherosclerosis, alzheime
disease; NMR {Homo sapiens}
Length = 307
Score = 28.6 bits (63), Expect = 8.1
Identities = 31/215 (14%), Positives = 71/215 (33%), Gaps = 23/215 (10%)
Query: 360 RLQLLQQLAEAKASLEDLSCSRTRVLALQAQVSSLQQDLTSHTS-LLSKKEEEIDRLRQE 418
+ +L + + L +L L+ L SH L + + D L++
Sbjct: 109 QARLGADMEDVCGRLVQYRGEVQAML--GQSTEELRVRLASHLRKLRKRLLRDADDLQKR 166
Query: 419 MVKKESDLVATSSDLV-ATRHELEEVRSELKEKENLEKTDDRKLEVCEVSKELEVLRGEL 477
+ ++ + + A R L + + + + + + L
Sbjct: 167 LAVYQAGAREGAERGLSAIRERLGPLVEQGRVR---------------AATVGSLAGQPL 211
Query: 478 EEQKTATKQWKKDWYQSVKERNAAVAELKQAQTENEALKEKLTSLEQELKVSEEALATAQ 537
+E+ A + + + + R L + + + ++ KL Q++++ EA
Sbjct: 212 QERAQAWGERLRARMEEMGSR--TRDRLDEVKEQVAEVRAKLEEQAQQIRLQAEAAQARL 269
Query: 538 NSLDSKLRE--HQALSNTIESMQKEMEQSAVRVRE 570
S L E + + +E +Q SA V
Sbjct: 270 KSRFEPLAEDMQRQWAGQVEKVQAAEGTSAAPVPS 304
>1tvf_A PBP4, penicillin binding protein 4; structural genomics, nysgxrc
target, SAV0642, PSI, protein structure initiative;
2.00A {Staphylococcus aureus} SCOP: b.105.1.2 e.3.1.1
Length = 369
Score = 28.6 bits (64), Expect = 8.8
Identities = 5/31 (16%), Positives = 13/31 (41%)
Query: 513 EALKEKLTSLEQELKVSEEALATAQNSLDSK 543
EA+ + SL+ + ++ + + S
Sbjct: 73 EAVNKGQLSLDDTVTMTNKEYIMSTLPELSN 103
>2fup_A Hypothetical protein PA3352; structural genomics, joint center for
structural genomics, J protein structure initiative,
PSI-2; 1.48A {Pseudomonas aeruginosa} SCOP: a.47.5.1
Length = 157
Score = 27.7 bits (61), Expect = 8.8
Identities = 17/122 (13%), Positives = 38/122 (31%), Gaps = 5/122 (4%)
Query: 391 VSSLQQDLTSHTSLLSKKEEEIDRLRQEMVKKESDLVATSSDLVATRHELEEVRSELKEK 450
+ +D+ LL +EE L + + L+ L+ R+E+ +
Sbjct: 9 LDLFAEDIGHANQLLQLVDEEFQALERRELPVLQQLLGAKQPLMQQLERNGRARAEILRE 68
Query: 451 ENLEKTDDRKLEVCEVSKELEVLRGELEEQKTATKQWKKDWYQSVKERNAAVAELKQAQT 510
+ + + L +E ++ ++ RN + QA T
Sbjct: 69 AGVSLDREGLARYARERADGAELLARGDELGELLERCQQ-----ANLRNGRIIRANQAST 123
Query: 511 EN 512
+
Sbjct: 124 GS 125
>2b3t_B RF-1, peptide chain release factor 1; translation termination,
methylation, conformational changes; HET: SAH; 3.10A
{Escherichia coli} SCOP: e.38.1.1
Length = 360
Score = 28.7 bits (65), Expect = 8.9
Identities = 21/96 (21%), Positives = 42/96 (43%), Gaps = 13/96 (13%)
Query: 440 LEEVRSELKEKENL----EKTDDRKLEVCEVSKELEVLRGELEEQKTATKQWKKDWYQSV 495
LE + +E + L + D++ +S+E +L + W++ + +
Sbjct: 9 LEALHERHEEVQALLGDAQTIADQE-RFRALSRE----YAQLSDVSRCFTDWQQV-QEDI 62
Query: 496 KERNAAV--AELKQ-AQTENEALKEKLTSLEQELKV 528
+ + E+++ AQ E KEK LEQ+L+V
Sbjct: 63 ETAQMMLDDPEMREMAQDELREAKEKSEQLEQQLQV 98
>3hun_A Penicillin-binding protein 4; ampicillin, beta-lactamase, serine
type D-Ala, D-Ala-carboxypeptidase, antibiotics; HET:
ZZ7; 2.00A {Staphylococcus aureus} PDB: 3hum_A*
Length = 453
Score = 28.7 bits (64), Expect = 9.0
Identities = 5/31 (16%), Positives = 13/31 (41%)
Query: 513 EALKEKLTSLEQELKVSEEALATAQNSLDSK 543
EA+ + SL+ + ++ + + S
Sbjct: 109 EAVNKGQLSLDDTVTMTNKEYIMSTLPELSN 139
>2xkj_E Topoisomerase IV; type IIA topoisomerase; 2.20A {Acinetobacter
baumannii} PDB: 2xkk_A*
Length = 767
Score = 28.9 bits (65), Expect = 9.1
Identities = 10/86 (11%), Positives = 32/86 (37%), Gaps = 22/86 (25%)
Query: 518 KLTSLEQELKVSEEALATAQNSLDSKLR-EHQALSNTIESMQK----EMEQSAVRVREMS 572
L LE+ ++R E LS +++ + + E+
Sbjct: 692 HLAKLEEM-----------------EIRHEQDELSAKAAIIREQLENPESLKNLIISELK 734
Query: 573 GISEKYEKDRKTLLELKSAKERLELE 598
++K+ +R++ + ++ +++ +
Sbjct: 735 EDAKKFGDERRSPIVARAEAVQIKEQ 760
>3r20_A Cytidylate kinase; structural genomics, seattle structural genomics
center for infectious disease, ssgcid, ADP, DCMP, D
transferase; 2.00A {Mycobacterium smegmatis} PDB: 3r8c_A
4die_A*
Length = 233
Score = 28.2 bits (64), Expect = 9.1
Identities = 13/59 (22%), Positives = 23/59 (38%), Gaps = 15/59 (25%)
Query: 587 ELK-----SAKER-----LELEVRGYKLDLESTRRELET--NKDQTIELRAKSKLEKAE 633
++K SA+ER + G D + +++ + D T R S L A+
Sbjct: 147 DVKIFLTASAEERARRRNAQNVANGLPDDYATVLADVQRRDHLDST---RPVSPLRAAD 202
>3abh_A Pacsin2, protein kinase C and casein kinase substrate in neurons
protein 2; helix bundle, coiled-coil, endocytosis; 2.00A
{Homo sapiens} PDB: 3q0k_A 3lll_A 3hah_A 3qni_A 3hai_A
3q84_A
Length = 312
Score = 28.2 bits (62), Expect = 9.6
Identities = 25/151 (16%), Positives = 52/151 (34%), Gaps = 8/151 (5%)
Query: 619 QTIELRAKSKLEKAEGELTTVREENKKL-KQGKIRLVYSLFKDPQPAQSKLEKAEGELTT 677
E ++ LE + E+ K K+ + + FK+ + A+ KA+
Sbjct: 95 SEAERVSELHLEVKASLMNDDFEKIKNWQKEAFHKQMMGGFKETKEAEDGFRKAQKPWAK 154
Query: 678 VREENKKLKVSFFFTLE----SNSLFWLDPNTFLSSLEDLKSNYTERESKLRSANEIIGE 733
+E + K + + + S + E LK + E + + +
Sbjct: 155 KLKEVEAAKKAHHAACKEEKLAISREANSKADPSLNPEQLKKLQDKIEKCKQDVLKTKEK 214
Query: 734 YETKITALESTMTRSESYCKEMVEYLETLQK 764
YE + L+ + Y + M + E Q+
Sbjct: 215 YEKSLKELDQGTPQ---YMENMEQVFEQCQQ 242
>1q3t_A Cytidylate kinase; nucleotide monophosphate kinase, CMP kinase,
transferase; NMR {Streptococcus pneumoniae} SCOP:
c.37.1.1
Length = 236
Score = 28.2 bits (64), Expect = 9.7
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 15/59 (25%)
Query: 587 ELK-----SAKER-----LELEVRGYKLDLESTRRELET--NKDQTIELRAKSKLEKAE 633
ELK S ER E +G + DLE+ ++E+ KD R S L++AE
Sbjct: 154 ELKIFLVASVDERAERRYKENIAKGIETDLETLKKEIAARDYKDSH---RETSPLKQAE 209
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.311 0.128 0.348
Gapped
Lambda K H
0.267 0.0672 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 11,292,756
Number of extensions: 670554
Number of successful extensions: 3432
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2271
Number of HSP's successfully gapped: 645
Length of query: 792
Length of database: 6,701,793
Length adjustment: 101
Effective length of query: 691
Effective length of database: 3,881,772
Effective search space: 2682304452
Effective search space used: 2682304452
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 61 (27.4 bits)