BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13737
(1388 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1N11|A Chain A, D34 Region Of Human Ankyrin-R And Linker
Length = 437
Score = 273 bits (699), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 167/414 (40%), Positives = 240/414 (57%), Gaps = 56/414 (13%)
Query: 917 LHIACKKNRIKVVELLLKHGASSHVVSCYSNVKVHVSLNKIQDVSSSILRLATCDVLPQC 976
LH+A + +V+ LL+ GAS +V SNVKV L+ +++ L Q
Sbjct: 18 LHVASFMGHLPIVKNLLQRGASPNV----SNVKVETPLH----MAARAGHTEVAKYLLQN 69
Query: 977 ETRLNFSNLRVREQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQE 1036
+ ++N + ++ QTPLH A+R+G+ ++V LLL++ A + T +T LHIAA+EG
Sbjct: 70 KAKVN---AKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHV 126
Query: 1037 EVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVA 1096
E LLE AS TKKGFTPLH+ KYG ++VA+LLL++DA + GKNG+TPLHVA
Sbjct: 127 ETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVA 186
Query: 1097 SHYDHQNVALLLLEKGAS--------------------MDIATTLLEYGAKPNAESVAGF 1136
H+++ ++ LLL +G S +++A +LL+YG NAESV G
Sbjct: 187 VHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGV 246
Query: 1137 TPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDT 1196
TPLHL+A EGHA+M A+LL A+ + K+GLTPLHL AQE V VA++L+K+ VD
Sbjct: 247 TPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDA 306
Query: 1197 PTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRXXXXXXXXXXXXXXYTNTTD 1256
T+ G+TPLH+A HYG I + + LL A+V T
Sbjct: 307 TTRMGYTPLHVASHYGNIKLVKFLLQHQADVNA------------------------KTK 342
Query: 1257 QGFTPLHHSAQQGHSTIVALLLDRGASPN-ATNKGFTPLHHSAQQGHSTIVALL 1309
G++PLH +AQQGH+ IV LLL GASPN ++ G TPL + + G+ ++ +L
Sbjct: 343 LGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVL 396
Score = 262 bits (670), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 157/394 (39%), Positives = 216/394 (54%), Gaps = 39/394 (9%)
Query: 992 TPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTS 1051
TPLH+AS +G++ IV LLQ GA+ + + + T LH+AA+ G EVA LL+N A + +
Sbjct: 16 TPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNA 75
Query: 1052 TTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEK 1111
K TPLH + GH + KLLL+ +A + G TPLH+A+ H L LLEK
Sbjct: 76 KAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEK 135
Query: 1112 GASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTP 1171
AS T GFTPLH++A G ++ +LLE A + A KNGLTP
Sbjct: 136 EASQACMTK-------------KGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTP 182
Query: 1172 LHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPK 1231
LH+ + + + +LLL +P G+TPLHIA Q+ +AR LL +
Sbjct: 183 LHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANA-- 240
Query: 1232 NFPSRXXXXXXXXXXXXXXYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATNK-G 1290
+ QG TPLH +AQ+GH+ +VALLL + A+ N NK G
Sbjct: 241 ----------------------ESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSG 278
Query: 1291 FTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANV 1350
TPLH AQ+GH + +L+ G +AT + G+TPLH+A HYG I + + LL A+V
Sbjct: 279 LTPLHLVAQEGHVPVADVLIKHGVMVDATTRM-GYTPLHVASHYGNIKLVKFLLQHQADV 337
Query: 1351 SCTTDQGFTPLHHSAQQGHSTIVALLLDRGASPN 1384
+ T G++PLH +AQQGH+ IV LLL GASPN
Sbjct: 338 NAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPN 371
Score = 202 bits (515), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 141/418 (33%), Positives = 208/418 (49%), Gaps = 42/418 (10%)
Query: 960 VSSSILRLATCDVLPQCETRLNFSNLRVREQQTPLHIASRLGNVDIVMLLLQHGAAVDST 1019
V+S + L L Q N SN++V +TPLH+A+R G+ ++ LLQ+ A V++
Sbjct: 20 VASFMGHLPIVKNLLQRGASPNVSNVKV---ETPLHMAARAGHTEVAKYLLQNKAKVNAK 76
Query: 1020 TKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKD 1079
KD T LH AA+ G + +LLEN A+ T G TPLH+ + GH++ LL+K+
Sbjct: 77 AKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKE 136
Query: 1080 APVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPL 1139
A K G TPLHVA+ Y + +A LLE A PNA G TPL
Sbjct: 137 ASQACMTKKGFTPLHVAAKY-------------GKVRVAELLLERDAHPNAAGKNGLTPL 183
Query: 1140 HLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTK 1199
H++ + D+ +LL G A NG TPLH+ A++++V VA LL+ + +
Sbjct: 184 HVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESV 243
Query: 1200 KGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRXXXXXXXXXXXXXXYTNTTDQGF 1259
+G TPLH+A G M LLL + AN N ++ G
Sbjct: 244 QGVTPLHLAAQEGHAEMVALLLSKQAN----GNLGNK--------------------SGL 279
Query: 1260 TPLHHSAQQGHSTIVALLLDRGASPNATNK-GFTPLHHSAQQGHSTIVALLLDRGASPNA 1318
TPLH AQ+GH + +L+ G +AT + G+TPLH ++ G+ +V LL A NA
Sbjct: 280 TPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNA 339
Query: 1319 TNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALL 1376
K G++PLH A G + LLL A+ + + G TPL + + G+ ++ +L
Sbjct: 340 KTKL-GYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVL 396
Score = 202 bits (513), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 130/370 (35%), Positives = 198/370 (53%), Gaps = 22/370 (5%)
Query: 35 TPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISS 94
TPLH+AA+ G + LL A ++ K +D T LHCAAR GH ++++LLE A +
Sbjct: 49 TPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNL 108
Query: 95 KTKVRGFYILRSGHEAVIEMLLEQGAPISSKTKVAAVLLENGASLTSTTKKGFTPLHLTG 154
T + + E +E +L LLE AS TKKGFTPLH+
Sbjct: 109 ATTAGHTPLHIAAREGHVETVL--------------ALLEKEASQACMTKKGFTPLHVAA 154
Query: 155 KYGHIKVAKLLLQKDAPVDFQGKAPVDDVTVDYLTALHVAAHCGHARVAKTLLDKKADPN 214
KYG ++VA+LLL++DA + GK + LT LHVA H + + K LL + P+
Sbjct: 155 KYGKVRVAELLLERDAHPNAAGK--------NGLTPLHVAVHHNNLDIVKLLLPRGGSPH 206
Query: 215 ARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 274
+ A NG+TPLHIA K+N+++V LL++G S A + LH+A ++ ++V LLL
Sbjct: 207 SPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLS 266
Query: 275 HGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKV 334
A+ + LH+ ++ + V ++L+KHG ++ATT + LH+A IK+
Sbjct: 267 KQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKL 326
Query: 335 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 394
V+ LL+H A + A T++ LH A ++ +V LLLK+GAS + L IA +
Sbjct: 327 VKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKR 386
Query: 395 KNRIKVVELL 404
I V ++L
Sbjct: 387 LGYISVTDVL 396
Score = 189 bits (479), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 128/372 (34%), Positives = 194/372 (52%), Gaps = 8/372 (2%)
Query: 132 LLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKAPVDDVTVDYLTAL 191
LL+ GAS + K TPLH+ + GH +VAK LLQ A V+ + K D T L
Sbjct: 33 LLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAK--------DDQTPL 84
Query: 192 HVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTE 251
H AA GH + K LL+ A+PN G TPLHIA ++ ++ V LL+ AS T+
Sbjct: 85 HCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTK 144
Query: 252 VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGAS 311
LH+A K +++V ELLL+ A A + LH+A N + +V+LLL G S
Sbjct: 145 KGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGS 204
Query: 312 IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 371
+ LHIA K+N+++V LL++G S A + LH+A ++ ++V LL
Sbjct: 205 PHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALL 264
Query: 372 LKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRI 431
L A+ + LH+ ++ + V ++L+KHG ++ATT + LH+A I
Sbjct: 265 LSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNI 324
Query: 432 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 491
K+V+ LL+H A + A T++ LH A ++ +V LLLK+GAS + L IA
Sbjct: 325 KLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIA 384
Query: 492 CKKNRIKVVELL 503
+ I V ++L
Sbjct: 385 KRLGYISVTDVL 396
Score = 181 bits (460), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 123/382 (32%), Positives = 198/382 (51%)
Query: 188 LTALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIE 247
LT LHVA+ GH + K LL + A PN + TPLH+A + +V + LL++ A +
Sbjct: 15 LTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVN 74
Query: 248 ATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 307
A + + LH A + +V+LLL++ A+ T LHIA ++ ++ V LL+
Sbjct: 75 AKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLE 134
Query: 308 HGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKV 367
AS T+ LH+A K +++V ELLL+ A A + LH+A N + +
Sbjct: 135 KEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDI 194
Query: 368 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 427
V+LLL G S + LHIA K+N+++V LL++G S A + LH+A +
Sbjct: 195 VKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQ 254
Query: 428 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 487
+ ++V LLL A+ + LH+ ++ + V ++L+KHG ++ATT +
Sbjct: 255 EGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTP 314
Query: 488 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 547
LH+A IK+V+ LL+H A + A T++ LH A ++ +V LLLK+GAS +
Sbjct: 315 LHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVS 374
Query: 548 EVREPMLHIACKKNRIKVVELL 569
L IA + I V ++L
Sbjct: 375 SDGTTPLAIAKRLGYISVTDVL 396
Score = 178 bits (451), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 128/404 (31%), Positives = 206/404 (50%), Gaps = 26/404 (6%)
Query: 752 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 811
LH+A + +V+ LL+ GAS + E LH+A + +V + LL++ A + A
Sbjct: 18 LHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKA 77
Query: 812 EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 871
+ + LH A + +V+LLL++ A+ T LHIA ++ ++ V LL+ A
Sbjct: 78 KDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEA 137
Query: 872 SIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVEL 931
S T+ LH+A K +++V ELLL+ A A + LH+A N + +V+L
Sbjct: 138 SQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKL 197
Query: 932 LLKHGASSHVVSCYSNVKVHVSLNKIQ-DVSSSILRLATCDVLPQCETRLNFSNLRVREQ 990
LL G S H + +H++ + Q +V+ S+L+ +N +
Sbjct: 198 LLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGS------------ANAESVQG 245
Query: 991 QTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLT 1050
TPLH+A++ G+ ++V LLL A + K T LH+ A+EG VA VL+++G +
Sbjct: 246 VTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVD 305
Query: 1051 STTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLE 1110
+TT+ G+TPLH+ YG+IK+ K LLQ A V+ + K G +PLH A+ H
Sbjct: 306 ATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGH--------- 356
Query: 1111 KGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAML 1154
DI T LL+ GA PN S G TPL ++ G+ ++ +L
Sbjct: 357 ----TDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVL 396
Score = 172 bits (435), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 119/382 (31%), Positives = 196/382 (51%)
Query: 221 FTPLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 280
TPLH+A + +V+ LL+ GAS + E LH+A + +V + LL++ A +
Sbjct: 15 LTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVN 74
Query: 281 ATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 340
A + + LH A + +V+LLL++ A+ T LHIA ++ ++ V LL+
Sbjct: 75 AKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLE 134
Query: 341 HGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKV 400
AS T+ LH+A K +++V ELLL+ A A + LH+A N + +
Sbjct: 135 KEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDI 194
Query: 401 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 460
V+LLL G S + LHIA K+N+++V LL++G S A + LH+A +
Sbjct: 195 VKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQ 254
Query: 461 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 520
+ ++V LLL A+ + LH+ ++ + V ++L+KHG ++ATT +
Sbjct: 255 EGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTP 314
Query: 521 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 580
LH+A IK+V+ LL+H A + A T++ LH A ++ +V LLLK+GAS +
Sbjct: 315 LHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVS 374
Query: 581 EVREPMLHIACKKNRIKVVELL 602
L IA + I V ++L
Sbjct: 375 SDGTTPLAIAKRLGYISVTDVL 396
Score = 166 bits (421), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 117/379 (30%), Positives = 194/379 (51%)
Query: 422 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 481
LH+A + +V+ LL+ GAS + E LH+A + +V + LL++ A + A
Sbjct: 18 LHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKA 77
Query: 482 EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 541
+ + LH A + +V+LLL++ A+ T LHIA ++ ++ V LL+ A
Sbjct: 78 KDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEA 137
Query: 542 SIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVEL 601
S T+ LH+A K +++V ELLL+ A A + LH+A N + +V+L
Sbjct: 138 SQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKL 197
Query: 602 LLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNR 661
LL G S + LHIA K+N+++V LL++G S A + LH+A ++
Sbjct: 198 LLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGH 257
Query: 662 IKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHI 721
++V LLL A+ + LH+ ++ + V ++L+KHG ++ATT + LH+
Sbjct: 258 AEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHV 317
Query: 722 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 781
A IK+V+ LL+H A + A T++ LH A ++ +V LLLK+GAS +
Sbjct: 318 ASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDG 377
Query: 782 EPMLHIACKKNRIKVVELL 800
L IA + I V ++L
Sbjct: 378 TTPLAIAKRLGYISVTDVL 396
Score = 159 bits (402), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 125/423 (29%), Positives = 205/423 (48%), Gaps = 44/423 (10%)
Query: 620 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 679
LH+A + +V+ LL+ GAS + E LH+A + +V + LL++ A + A
Sbjct: 18 LHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKA 77
Query: 680 EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 739
+ + LH A + +V+LLL++ A+ T LHIA ++ ++ V LL+ A
Sbjct: 78 KDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEA 137
Query: 740 SIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVEL 799
S T+ LH+A K +++V ELLL+ A A + LH+A N + +V+L
Sbjct: 138 SQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKL 197
Query: 800 LLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNR 859
LL G S + LHIA K+N+++V LL++G S A + LH+A ++
Sbjct: 198 LLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGH 257
Query: 860 IKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHI 919
++V LLL A+ + LH+ ++ + V ++L+KHG ++ATT + LH+
Sbjct: 258 AEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHV 317
Query: 920 ACKKNRIKVVELLLKHGASSHVVSCYSNVKVHVSLNKIQDVSSSILRLATCDVLPQCETR 979
A IK+V+ LL+H A DV++ +T+
Sbjct: 318 ASHYGNIKLVKFLLQHQA---------------------DVNA--------------KTK 342
Query: 980 LNFSNLRVREQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVA 1039
L +S PLH A++ G+ DIV LLL++GA+ + + D T L IA + G V
Sbjct: 343 LGYS---------PLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVT 393
Query: 1040 AVL 1042
VL
Sbjct: 394 DVL 396
Score = 153 bits (386), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 100/263 (38%), Positives = 142/263 (53%), Gaps = 11/263 (4%)
Query: 1136 FTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVD 1195
TPLH+++ GH + LL+ GA + + TPLH+ A+ VA+ LL+N A+V+
Sbjct: 15 LTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVN 74
Query: 1196 TPTKKGFTPLHIACHYGQISMARLLLDQSANVTV-------PKNFPSRXXXXXXXXXXXX 1248
K TPLH A G +M +LLL+ +AN + P + +R
Sbjct: 75 AKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLE 134
Query: 1249 XXYTNT--TDQGFTPLHHSAQQGHSTIVALLLDRGASPNATNK-GFTPLHHSAQQGHSTI 1305
+ T +GFTPLH +A+ G + LLL+R A PNA K G TPLH + + I
Sbjct: 135 KEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDI 194
Query: 1306 VALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSA 1365
V LLL RG SP++ G+TPLHIA Q+ +AR LL + + + QG TPLH +A
Sbjct: 195 VKLLLPRGGSPHSP-AWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAA 253
Query: 1366 QQGHSTIVALLLDRGASPNATNK 1388
Q+GH+ +VALLL + A+ N NK
Sbjct: 254 QEGHAEMVALLLSKQANGNLGNK 276
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 103/210 (49%), Gaps = 29/210 (13%)
Query: 3 WTHYWKLHKVTKYSQ-KVINTINPFGSHFQ----HNITPLHVAAKWGKANMVTLLLSRGA 57
W Y LH K +Q +V ++ +G +TPLH+AA+ G A MV LLLS+ A
Sbjct: 210 WNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQA 269
Query: 58 NIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISSKTKVRGFYILR-SGHEAVIEMLL 116
N + + GLT LH A+ GH V ++L++ G + + T++ G+ L + H I
Sbjct: 270 NGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRM-GYTPLHVASHYGNI---- 324
Query: 117 EQGAPISSKTKVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQG 176
K+ LL++ A + + TK G++PLH + GH + LLL+ G
Sbjct: 325 ----------KLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLK-------NG 367
Query: 177 KAPVDDVTVDYLTALHVAAHCGHARVAKTL 206
+P ++V+ D T L +A G+ V L
Sbjct: 368 ASP-NEVSSDGTTPLAIAKRLGYISVTDVL 396
>pdb|2XEH|A Chain A, Structural Determinants For Improved Thermal Stability Of
Designed Ankyrin Repeat Proteins With A Redesigned C-
Capping Module.
pdb|2XEH|B Chain B, Structural Determinants For Improved Thermal Stability Of
Designed Ankyrin Repeat Proteins With A Redesigned C-
Capping Module.
pdb|2XEH|C Chain C, Structural Determinants For Improved Thermal Stability Of
Designed Ankyrin Repeat Proteins With A Redesigned C-
Capping Module
Length = 157
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 99/168 (58%), Gaps = 13/168 (7%)
Query: 1022 DLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAP 1081
DL L AA+ GQ++ +L+ NGA + + K G+TPLHL + GH+++ ++LL+ A
Sbjct: 1 DLGKKLLEAARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGAD 60
Query: 1082 VDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHL 1141
V+ + K+G TPLH+A+ H ++I LL+ GA NA+ G+TPLHL
Sbjct: 61 VNAKDKDGYTPLHLAAREGH-------------LEIVEVLLKAGADVNAKDKDGYTPLHL 107
Query: 1142 SASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLK 1189
+A EGH ++ +LL+ GADV+ K G TP L +E +AE+L K
Sbjct: 108 AAREGHLEIVEVLLKAGADVNAQDKFGKTPFDLAIREGHEDIAEVLQK 155
Score = 114 bits (286), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 95/158 (60%), Gaps = 13/158 (8%)
Query: 997 ASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKG 1056
A+R G D V +L+ +GA V++ KD YT LH+AA+EG E+ VLL+ GA + + K G
Sbjct: 9 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 68
Query: 1057 FTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMD 1116
+TPLHL + GH+++ ++LL+ A V+ + K+G TPLH+A+ H ++
Sbjct: 69 YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGH-------------LE 115
Query: 1117 IATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAML 1154
I LL+ GA NA+ G TP L+ EGH D++ +L
Sbjct: 116 IVEVLLKAGADVNAQDKFGKTPFDLAIREGHEDIAEVL 153
Score = 107 bits (267), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 85/125 (68%)
Query: 984 NLRVREQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLL 1043
N + ++ TPLH+A+R G+++IV +LL+ GA V++ KD YT LH+AA+EG E+ VLL
Sbjct: 29 NAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLL 88
Query: 1044 ENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQN 1103
+ GA + + K G+TPLHL + GH+++ ++LL+ A V+ Q K G TP +A H++
Sbjct: 89 KAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTPFDLAIREGHED 148
Query: 1104 VALLL 1108
+A +L
Sbjct: 149 IAEVL 153
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/125 (43%), Positives = 78/125 (62%), Gaps = 2/125 (1%)
Query: 1265 SAQQGHSTIVALLLDRGASPNATNK-GFTPLHHSAQQGHSTIVALLLDRGASPNATNKTR 1323
+A+ G V +L+ GA NA +K G+TPLH +A++GH IV +LL GA NA +K
Sbjct: 9 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKD- 67
Query: 1324 GFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGASP 1383
G+TPLH+A G + + +LL A+V+ G+TPLH +A++GH IV +LL GA
Sbjct: 68 GYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADV 127
Query: 1384 NATNK 1388
NA +K
Sbjct: 128 NAQDK 132
Score = 100 bits (248), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 78/127 (61%), Gaps = 3/127 (2%)
Query: 1252 TNTTDQ-GFTPLHHSAQQGHSTIVALLLDRGASPNATNK-GFTPLHHSAQQGHSTIVALL 1309
N D+ G+TPLH +A++GH IV +LL GA NA +K G+TPLH +A++GH IV +L
Sbjct: 28 VNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVL 87
Query: 1310 LDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGH 1369
L GA NA +K G+TPLH+A G + + +LL A+V+ G TP + ++GH
Sbjct: 88 LKAGADVNAKDKD-GYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTPFDLAIREGH 146
Query: 1370 STIVALL 1376
I +L
Sbjct: 147 EDIAEVL 153
Score = 99.8 bits (247), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 85/172 (49%), Gaps = 24/172 (13%)
Query: 1106 LLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAA 1165
LL + D L+ GA NA+ G+TPLHL+A EGH ++ +LL+ GADV+
Sbjct: 6 LLEAARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKD 65
Query: 1166 KNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSA 1225
K+G TPLHL A+E + + E+LLK A V+ K G+TPLH+A G + + +LL A
Sbjct: 66 KDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGA 125
Query: 1226 NVTVPKNFPSRXXXXXXXXXXXXXXYTNTTDQGFTPLHHSAQQGHSTIVALL 1277
+V F G TP + ++GH I +L
Sbjct: 126 DVNAQDKF------------------------GKTPFDLAIREGHEDIAEVL 153
Score = 99.8 bits (247), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 87/156 (55%), Gaps = 13/156 (8%)
Query: 1065 KYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEY 1124
+ G ++L+ A V+ + K+G TPLH+A+ H ++I LL+
Sbjct: 11 RAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGH-------------LEIVEVLLKA 57
Query: 1125 GAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVA 1184
GA NA+ G+TPLHL+A EGH ++ +LL+ GADV+ K+G TPLHL A+E + +
Sbjct: 58 GADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIV 117
Query: 1185 ELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLL 1220
E+LLK A V+ K G TP +A G +A +L
Sbjct: 118 EVLLKAGADVNAQDKFGKTPFDLAIREGHEDIAEVL 153
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 88/149 (59%), Gaps = 25/149 (16%)
Query: 40 AAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISSKTKVR 99
AA+ G+ + V +L++ GA+++ K +DG T LH AAR GH ++E+LL+ GA +++K K
Sbjct: 9 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDK-D 67
Query: 100 GFYIL----RSGHEAVIEMLLEQGAPISSKTKVAAVLLENGASLTSTTKKGFTPLHLTGK 155
G+ L R GH ++E+LL+ GA +++K K G+TPLHL +
Sbjct: 68 GYTPLHLAAREGHLEIVEVLLKAGADVNAK-----------------DKDGYTPLHLAAR 110
Query: 156 YGHIKVAKLLLQKDAPVDFQ---GKAPVD 181
GH+++ ++LL+ A V+ Q GK P D
Sbjct: 111 EGHLEIVEVLLKAGADVNAQDKFGKTPFD 139
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 86/147 (58%)
Query: 194 AAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVR 253
AA G + L+ AD NA+ +G+TPLH+A ++ +++VE+LLK GA + A +
Sbjct: 9 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 68
Query: 254 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 313
LH+A ++ +++VE+LLK GA + A + LH+A ++ +++VE+LLK GA +
Sbjct: 69 YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 128
Query: 314 ATTEVREPMLHIACKKNRIKVVELLLK 340
A + + +A ++ + E+L K
Sbjct: 129 AQDKFGKTPFDLAIREGHEDIAEVLQK 155
Score = 84.0 bits (206), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 73/122 (59%)
Query: 186 DYLTALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGAS 245
D T LH+AA GH + + LL AD NA+ +G+TPLH+A ++ +++VE+LLK GA
Sbjct: 34 DGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGAD 93
Query: 246 IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 305
+ A + LH+A ++ +++VE+LLK GA + A + + +A ++ + E+L
Sbjct: 94 VNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTPFDLAIREGHEDIAEVL 153
Query: 306 LK 307
K
Sbjct: 154 QK 155
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 78/139 (56%), Gaps = 22/139 (15%)
Query: 31 QHNITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGA 90
+ TPLH+AA+ G +V +LL GA+++ K +DG T LH AAR GH ++E+LL+ GA
Sbjct: 33 KDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGA 92
Query: 91 PISSKTKVRGFYIL----RSGHEAVIEMLLEQGAPISSKTKVAAVLLENGASLTSTTKKG 146
+++K K G+ L R GH ++E+LL+ GA ++++ K G
Sbjct: 93 DVNAKDK-DGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKF-----------------G 134
Query: 147 FTPLHLTGKYGHIKVAKLL 165
TP L + GH +A++L
Sbjct: 135 KTPFDLAIREGHEDIAEVL 153
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 83/147 (56%)
Query: 227 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 286
A + + V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A +
Sbjct: 9 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 68
Query: 287 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 346
LH+A ++ +++VE+LLK GA + A + LH+A ++ +++VE+LLK GA +
Sbjct: 69 YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 128
Query: 347 ATTEVREPMLHIACKKNRIKVVELLLK 373
A + + +A ++ + E+L K
Sbjct: 129 AQDKFGKTPFDLAIREGHEDIAEVLQK 155
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 83/147 (56%)
Query: 260 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 319
A + + V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A +
Sbjct: 9 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 68
Query: 320 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 379
LH+A ++ +++VE+LLK GA + A + LH+A ++ +++VE+LLK GA +
Sbjct: 69 YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 128
Query: 380 ATTEVREPMLHIACKKNRIKVVELLLK 406
A + + +A ++ + E+L K
Sbjct: 129 AQDKFGKTPFDLAIREGHEDIAEVLQK 155
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 83/147 (56%)
Query: 293 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 352
A + + V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A +
Sbjct: 9 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 68
Query: 353 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 412
LH+A ++ +++VE+LLK GA + A + LH+A ++ +++VE+LLK GA +
Sbjct: 69 YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 128
Query: 413 ATTEVREPMLHIACKKNRIKVVELLLK 439
A + + +A ++ + E+L K
Sbjct: 129 AQDKFGKTPFDLAIREGHEDIAEVLQK 155
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 83/147 (56%)
Query: 326 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 385
A + + V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A +
Sbjct: 9 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 68
Query: 386 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 445
LH+A ++ +++VE+LLK GA + A + LH+A ++ +++VE+LLK GA +
Sbjct: 69 YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 128
Query: 446 ATTEVREPMLHIACKKNRIKVVELLLK 472
A + + +A ++ + E+L K
Sbjct: 129 AQDKFGKTPFDLAIREGHEDIAEVLQK 155
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 83/147 (56%)
Query: 359 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 418
A + + V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A +
Sbjct: 9 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 68
Query: 419 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 478
LH+A ++ +++VE+LLK GA + A + LH+A ++ +++VE+LLK GA +
Sbjct: 69 YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 128
Query: 479 ATTEVREPMLHIACKKNRIKVVELLLK 505
A + + +A ++ + E+L K
Sbjct: 129 AQDKFGKTPFDLAIREGHEDIAEVLQK 155
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 83/147 (56%)
Query: 392 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 451
A + + V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A +
Sbjct: 9 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 68
Query: 452 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 511
LH+A ++ +++VE+LLK GA + A + LH+A ++ +++VE+LLK GA +
Sbjct: 69 YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 128
Query: 512 ATTEVREPMLHIACKKNRIKVVELLLK 538
A + + +A ++ + E+L K
Sbjct: 129 AQDKFGKTPFDLAIREGHEDIAEVLQK 155
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 83/147 (56%)
Query: 425 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 484
A + + V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A +
Sbjct: 9 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 68
Query: 485 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 544
LH+A ++ +++VE+LLK GA + A + LH+A ++ +++VE+LLK GA +
Sbjct: 69 YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 128
Query: 545 ATTEVREPMLHIACKKNRIKVVELLLK 571
A + + +A ++ + E+L K
Sbjct: 129 AQDKFGKTPFDLAIREGHEDIAEVLQK 155
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 83/147 (56%)
Query: 458 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 517
A + + V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A +
Sbjct: 9 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 68
Query: 518 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 577
LH+A ++ +++VE+LLK GA + A + LH+A ++ +++VE+LLK GA +
Sbjct: 69 YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 128
Query: 578 ATTEVREPMLHIACKKNRIKVVELLLK 604
A + + +A ++ + E+L K
Sbjct: 129 AQDKFGKTPFDLAIREGHEDIAEVLQK 155
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 83/147 (56%)
Query: 491 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 550
A + + V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A +
Sbjct: 9 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 68
Query: 551 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 610
LH+A ++ +++VE+LLK GA + A + LH+A ++ +++VE+LLK GA +
Sbjct: 69 YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 128
Query: 611 ATTEVREPMLHIACKKNRIKVVELLLK 637
A + + +A ++ + E+L K
Sbjct: 129 AQDKFGKTPFDLAIREGHEDIAEVLQK 155
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 83/147 (56%)
Query: 524 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 583
A + + V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A +
Sbjct: 9 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 68
Query: 584 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 643
LH+A ++ +++VE+LLK GA + A + LH+A ++ +++VE+LLK GA +
Sbjct: 69 YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 128
Query: 644 ATTEVREPMLHIACKKNRIKVVELLLK 670
A + + +A ++ + E+L K
Sbjct: 129 AQDKFGKTPFDLAIREGHEDIAEVLQK 155
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 83/147 (56%)
Query: 557 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 616
A + + V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A +
Sbjct: 9 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 68
Query: 617 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 676
LH+A ++ +++VE+LLK GA + A + LH+A ++ +++VE+LLK GA +
Sbjct: 69 YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 128
Query: 677 ATTEVREPMLHIACKKNRIKVVELLLK 703
A + + +A ++ + E+L K
Sbjct: 129 AQDKFGKTPFDLAIREGHEDIAEVLQK 155
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 83/147 (56%)
Query: 590 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 649
A + + V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A +
Sbjct: 9 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 68
Query: 650 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 709
LH+A ++ +++VE+LLK GA + A + LH+A ++ +++VE+LLK GA +
Sbjct: 69 YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 128
Query: 710 ATTEVREPMLHIACKKNRIKVVELLLK 736
A + + +A ++ + E+L K
Sbjct: 129 AQDKFGKTPFDLAIREGHEDIAEVLQK 155
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 83/147 (56%)
Query: 623 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 682
A + + V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A +
Sbjct: 9 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 68
Query: 683 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 742
LH+A ++ +++VE+LLK GA + A + LH+A ++ +++VE+LLK GA +
Sbjct: 69 YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 128
Query: 743 ATTEVREPMLHIACKKNRIKVVELLLK 769
A + + +A ++ + E+L K
Sbjct: 129 AQDKFGKTPFDLAIREGHEDIAEVLQK 155
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 83/147 (56%)
Query: 656 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 715
A + + V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A +
Sbjct: 9 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 68
Query: 716 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 775
LH+A ++ +++VE+LLK GA + A + LH+A ++ +++VE+LLK GA +
Sbjct: 69 YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 128
Query: 776 ATTEVREPMLHIACKKNRIKVVELLLK 802
A + + +A ++ + E+L K
Sbjct: 129 AQDKFGKTPFDLAIREGHEDIAEVLQK 155
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 83/147 (56%)
Query: 689 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 748
A + + V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A +
Sbjct: 9 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 68
Query: 749 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 808
LH+A ++ +++VE+LLK GA + A + LH+A ++ +++VE+LLK GA +
Sbjct: 69 YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 128
Query: 809 ATTEVREPMLHIACKKNRIKVVELLLK 835
A + + +A ++ + E+L K
Sbjct: 129 AQDKFGKTPFDLAIREGHEDIAEVLQK 155
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 83/147 (56%)
Query: 722 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 781
A + + V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A +
Sbjct: 9 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 68
Query: 782 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 841
LH+A ++ +++VE+LLK GA + A + LH+A ++ +++VE+LLK GA +
Sbjct: 69 YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 128
Query: 842 ATTEVREPMLHIACKKNRIKVVELLLK 868
A + + +A ++ + E+L K
Sbjct: 129 AQDKFGKTPFDLAIREGHEDIAEVLQK 155
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 83/147 (56%)
Query: 755 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 814
A + + V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A +
Sbjct: 9 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 68
Query: 815 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 874
LH+A ++ +++VE+LLK GA + A + LH+A ++ +++VE+LLK GA +
Sbjct: 69 YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 128
Query: 875 ATTEVREPMLHIACKKNRIKVVELLLK 901
A + + +A ++ + E+L K
Sbjct: 129 AQDKFGKTPFDLAIREGHEDIAEVLQK 155
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 83/147 (56%)
Query: 788 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 847
A + + V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A +
Sbjct: 9 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 68
Query: 848 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 907
LH+A ++ +++VE+LLK GA + A + LH+A ++ +++VE+LLK GA +
Sbjct: 69 YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 128
Query: 908 ATTEVREPMLHIACKKNRIKVVELLLK 934
A + + +A ++ + E+L K
Sbjct: 129 AQDKFGKTPFDLAIREGHEDIAEVLQK 155
Score = 73.2 bits (178), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 92/189 (48%), Gaps = 44/189 (23%)
Query: 854 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 913
A + + V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A +
Sbjct: 9 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 68
Query: 914 EPMLHIACKKNRIKVVELLLKHGASSHVVSCYSNVKVHVSLNKIQDVSSSILRLATCDVL 973
LH+A ++ +++VE+LLK GA DV
Sbjct: 69 YTPLHLAAREGHLEIVEVLLKAGA---------------------DV------------- 94
Query: 974 PQCETRLNFSNLRVREQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKE 1033
N + ++ TPLH+A+R G+++IV +LL+ GA V++ K T +A +E
Sbjct: 95 ----------NAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTPFDLAIRE 144
Query: 1034 GQEEVAAVL 1042
G E++A VL
Sbjct: 145 GHEDIAEVL 153
Score = 73.2 bits (178), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 82/149 (55%)
Query: 821 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 880
A + + V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A +
Sbjct: 9 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 68
Query: 881 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASSH 940
LH+A ++ +++VE+LLK GA + A + LH+A ++ +++VE+LLK GA +
Sbjct: 69 YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 128
Query: 941 VVSCYSNVKVHVSLNKIQDVSSSILRLAT 969
+ +++ + + + +L+ A
Sbjct: 129 AQDKFGKTPFDLAIREGHEDIAEVLQKAA 157
>pdb|3UTM|A Chain A, Crystal Structure Of A Mouse Tankyrase-Axin Complex
pdb|3UTM|B Chain B, Crystal Structure Of A Mouse Tankyrase-Axin Complex
Length = 351
Score = 114 bits (286), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 134/276 (48%), Gaps = 13/276 (4%)
Query: 814 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 873
++ +L A N K++ LL + A+ + LH+A NR+++V+LLL+HGA +
Sbjct: 25 KDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADV 84
Query: 874 EATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLL 933
A + LH AC +V ELLLKHGA + A + LH A KNR++V LLL
Sbjct: 85 HAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLL 144
Query: 934 KHGASSHVVSCYSNVKVHVSLN-------KIQDVSSSILRLATCDVLPQCETRLNFSNLR 986
HGA +V+C+ V ++ + S+L+ A L + + L +
Sbjct: 145 SHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIIN 204
Query: 987 VREQQ---TPLHIAS---RLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAA 1040
++ Q T LH A + LLL+ GA V+ KD T LH+AA+ +V
Sbjct: 205 FKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVME 264
Query: 1041 VLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLL 1076
VL ++GA + + G T LH GH++ +LLL
Sbjct: 265 VLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLL 300
Score = 112 bits (279), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 145/316 (45%), Gaps = 26/316 (8%)
Query: 682 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 741
++ +L A N K++ LL + A+ + LH+A NR+++V+LLL+HGA +
Sbjct: 25 KDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADV 84
Query: 742 EATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLL 801
A + LH AC +V ELLLKHGA + A + LH A KNR++V LLL
Sbjct: 85 HAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLL 144
Query: 802 KHGAS-------------IEATTEVRE---------PMLHIACKKNRIKVVELLLKHGAS 839
HGA + T E+RE +L A + + KV + L +
Sbjct: 145 SHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIIN 204
Query: 840 IEATTEVREPMLHIACKK---NRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 896
+ + E LH A R +V ELLL+ GA++ + LH+A ++ V+
Sbjct: 205 FK-QPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVM 263
Query: 897 ELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASSHVVSCYSNVKVHVSLNK 956
E+L KHGA + A + + LH A ++ LLL +G+ ++S +
Sbjct: 264 EVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFTAAQMGNEA 323
Query: 957 IQDVSSSILRLATCDV 972
+Q + S + T DV
Sbjct: 324 VQQILSESTPMRTSDV 339
Score = 106 bits (264), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/307 (31%), Positives = 143/307 (46%), Gaps = 32/307 (10%)
Query: 200 ARVAKTLLDKKADPNARA-LNGFTP----LHIACKKNRIKVVELLLKHGASIEATTEVRE 254
K+ LD ADP+A+A L G L A N K++ LL + A+ +
Sbjct: 1 GEFGKSALDL-ADPSAKAVLTGEYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKS 59
Query: 255 PMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEA 314
LH+A NR+++V+LLL+HGA + A + LH AC +V ELLLKHGA + A
Sbjct: 60 TPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNA 119
Query: 315 TTEVREPMLHIACKKNRIKVVELLLKHGA-------------SIEATTEVRE-------- 353
+ LH A KNR++V LLL HGA + T E+RE
Sbjct: 120 MDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKG 179
Query: 354 -PMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKK---NRIKVVELLLKHGA 409
+L A + + KV + L + + + E LH A R +V ELLL+ GA
Sbjct: 180 HSLLQAAREADLAKVKKTLALEIINFK-QPQSHETALHCAVASLHPKRKQVAELLLRKGA 238
Query: 410 SIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVEL 469
++ + LH+A ++ V+E+L KHGA + A + + LH A ++ L
Sbjct: 239 NVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRL 298
Query: 470 LLKHGAS 476
LL +G+
Sbjct: 299 LLSYGSD 305
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 133/282 (47%), Gaps = 26/282 (9%)
Query: 253 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 312
++ +L A N K++ LL + A+ + LH+A NR+++V+LLL+HGA +
Sbjct: 25 KDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADV 84
Query: 313 EATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLL 372
A + LH AC +V ELLLKHGA + A + LH A KNR++V LLL
Sbjct: 85 HAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLL 144
Query: 373 KHGA-------------SIEATTEVRE---------PMLHIACKKNRIKVVELLLKHGAS 410
HGA + T E+RE +L A + + KV + L +
Sbjct: 145 SHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIIN 204
Query: 411 IEATTEVREPMLHIACKK---NRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 467
+ + E LH A R +V ELLL+ GA++ + LH+A ++ V+
Sbjct: 205 FK-QPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVM 263
Query: 468 ELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGAS 509
E+L KHGA + A + + LH A ++ LLL +G+
Sbjct: 264 EVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSD 305
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 133/282 (47%), Gaps = 26/282 (9%)
Query: 418 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 477
++ +L A N K++ LL + A+ + LH+A NR+++V+LLL+HGA +
Sbjct: 25 KDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADV 84
Query: 478 EATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLL 537
A + LH AC +V ELLLKHGA + A + LH A KNR++V LLL
Sbjct: 85 HAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLL 144
Query: 538 KHGA-------------SIEATTEVRE---------PMLHIACKKNRIKVVELLLKHGAS 575
HGA + T E+RE +L A + + KV + L +
Sbjct: 145 SHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIIN 204
Query: 576 IEATTEVREPMLHIACKK---NRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 632
+ + E LH A R +V ELLL+ GA++ + LH+A ++ V+
Sbjct: 205 FK-QPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVM 263
Query: 633 ELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGAS 674
E+L KHGA + A + + LH A ++ LLL +G+
Sbjct: 264 EVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSD 305
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 133/282 (47%), Gaps = 26/282 (9%)
Query: 583 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 642
++ +L A N K++ LL + A+ + LH+A NR+++V+LLL+HGA +
Sbjct: 25 KDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADV 84
Query: 643 EATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLL 702
A + LH AC +V ELLLKHGA + A + LH A KNR++V LLL
Sbjct: 85 HAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLL 144
Query: 703 KHGA-------------SIEATTEVRE---------PMLHIACKKNRIKVVELLLKHGAS 740
HGA + T E+RE +L A + + KV + L +
Sbjct: 145 SHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIIN 204
Query: 741 IEATTEVREPMLHIACKK---NRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 797
+ + E LH A R +V ELLL+ GA++ + LH+A ++ V+
Sbjct: 205 FK-QPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVM 263
Query: 798 ELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGAS 839
E+L KHGA + A + + LH A ++ LLL +G+
Sbjct: 264 EVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSD 305
Score = 97.1 bits (240), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 115/247 (46%), Gaps = 26/247 (10%)
Query: 189 TALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEA 248
T LH+AA R+ + LL AD +A+ G PLH AC +V ELLLKHGA + A
Sbjct: 60 TPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNA 119
Query: 249 TTEVREPMLHIACKKNRIKVVELLLKHGA-------------SIEATTEVRE-------- 287
+ LH A KNR++V LLL HGA + T E+RE
Sbjct: 120 MDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKG 179
Query: 288 -PMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKK---NRIKVVELLLKHGA 343
+L A + + KV + L + + + E LH A R +V ELLL+ GA
Sbjct: 180 HSLLQAAREADLAKVKKTLALEIINFK-QPQSHETALHCAVASLHPKRKQVAELLLRKGA 238
Query: 344 SIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVEL 403
++ + LH+A ++ V+E+L KHGA + A + + LH A ++ L
Sbjct: 239 NVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRL 298
Query: 404 LLKHGAS 410
LL +G+
Sbjct: 299 LLSYGSD 305
Score = 95.9 bits (237), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 144/306 (47%), Gaps = 43/306 (14%)
Query: 781 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 840
++ +L A N K++ LL + A+ + LH+A NR+++V+LLL+HGA +
Sbjct: 25 KDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADV 84
Query: 841 EATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLL 900
A + LH AC +V ELLLKHGA + A + LH A KNR++V LLL
Sbjct: 85 HAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLL 144
Query: 901 KHGAS-------------IEATTEVRE---------PMLHIACKKNRIKV-----VELLL 933
HGA + T E+RE +L A + + KV +E++
Sbjct: 145 SHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIIN 204
Query: 934 KHGASSHVVSCYSNVKVHVSLN-KIQDVSSSILRLATCDVLPQCETRLNFSNLRVREQQT 992
SH + + V SL+ K + V+ +LR +N N ++ T
Sbjct: 205 FKQPQSHETALHCAV---ASLHPKRKQVAELLLRKGA---------NVNEKN---KDFMT 249
Query: 993 PLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTST 1052
PLH+A+ + D++ +L +HGA +++ TALH AA G + +LL G+ +
Sbjct: 250 PLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSII 309
Query: 1053 TKKGFT 1058
+ +GFT
Sbjct: 310 SLQGFT 315
Score = 92.4 bits (228), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 129/287 (44%), Gaps = 34/287 (11%)
Query: 116 LEQGAPISSKTKVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQ 175
L + A ++ K+ A+L + ++ + TPLHL Y +++ +LLLQ A V +
Sbjct: 28 LLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAK 87
Query: 176 GKAPVDDVTVDYLTALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKV 235
K L LH A GH V + LL A NA L FTPLH A KNR++V
Sbjct: 88 DKGG--------LVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEV 139
Query: 236 VELLLKHGA-------------SIEATTEVRE---------PMLHIACKKNRIKVVELLL 273
LLL HGA + T E+RE +L A + + KV + L
Sbjct: 140 CSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLA 199
Query: 274 KHGASIEATTEVREPMLHIACKK---NRIKVVELLLKHGASIEATTEVREPMLHIACKKN 330
+ + + E LH A R +V ELLL+ GA++ + LH+A ++
Sbjct: 200 LEIINFK-QPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERA 258
Query: 331 RIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGAS 377
V+E+L KHGA + A + + LH A ++ LLL +G+
Sbjct: 259 HNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSD 305
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 124/256 (48%), Gaps = 21/256 (8%)
Query: 990 QQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASL 1049
+ TPLH+A+ V IV LLLQHGA V + K LH A G EV +LL++GA +
Sbjct: 58 KSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACV 117
Query: 1050 TSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAP---VDFQGKNGV----TP-LHVASHYDH 1101
+ FTPLH ++V LLL A V+ GK+ V TP L Y+
Sbjct: 118 NAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEF 177
Query: 1102 QNVALLLLEKGASM-----DIATTLLEYGAKPNAESVAGFTPLHLSASEGHA---DMSAM 1153
+ +LL + A + +A ++ + + E T LH + + H ++ +
Sbjct: 178 KGHSLLQAAREADLAKVKKTLALEIINFKQPQSHE-----TALHCAVASLHPKRKQVAEL 232
Query: 1154 LLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQ 1213
LL GA+V+ K+ +TPLH+ A+ V E+L K+ A+++ G T LH A G
Sbjct: 233 LLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGH 292
Query: 1214 ISMARLLLDQSANVTV 1229
+ RLLL ++ ++
Sbjct: 293 LQTCRLLLSYGSDPSI 308
Score = 87.8 bits (216), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 133/298 (44%), Gaps = 41/298 (13%)
Query: 1091 TPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADM 1150
TPLH+A+ Y+ + LLL+ GA + +A+ G PLH + S GH ++
Sbjct: 60 TPLHLAAGYNRVRIVQLLLQHGADV-------------HAKDKGGLVPLHNACSYGHYEV 106
Query: 1151 SAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACH 1210
+ +LL+HGA V+ TPLH A ++RV V LLL + G P + CH
Sbjct: 107 TELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSH----------GADPTLVNCH 156
Query: 1211 -YGQISMA-------RLLLDQSANVTVPKNFPSRXXXXXXXXXXXXXXYTNTTDQGFTPL 1262
+ MA RL + + + + + T L
Sbjct: 157 GKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHE-TAL 215
Query: 1263 HHSAQQGH---STIVALLLDRGASPNATNKGF-TPLHHSAQQGHSTIVALLLDRGASPNA 1318
H + H + LLL +GA+ N NK F TPLH +A++ H+ ++ +L GA NA
Sbjct: 216 HCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNA 275
Query: 1319 TNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALL 1376
+ + G T LH A G + RLLL ++ S + QGFT +AQ G+ + +L
Sbjct: 276 LD-SLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFT----AAQMGNEAVQQIL 328
Score = 80.5 bits (197), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 119/259 (45%), Gaps = 28/259 (10%)
Query: 35 TPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISS 94
TPLH+AA + + +V LLL GA++ K + GL LH A GH V E+LL+ GA +++
Sbjct: 60 TPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNA 119
Query: 95 KTKVRGFYILRSGHEA-------VIEMLLEQGAPIS-----SKTKVAAVLLENGASLTST 142
+ HEA V +LL GA + K+ V +
Sbjct: 120 MD----LWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTY 175
Query: 143 TKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKAPVDDVTVDYLTALHVAA---HCGH 199
KG + L + KV K L + ++F K P + TALH A H
Sbjct: 176 EFKGHSLLQAAREADLAKVKKTLALE--IINF--KQP-----QSHETALHCAVASLHPKR 226
Query: 200 ARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHI 259
+VA+ LL K A+ N + + TPLH+A ++ V+E+L KHGA + A + + LH
Sbjct: 227 KQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHR 286
Query: 260 ACKKNRIKVVELLLKHGAS 278
A ++ LLL +G+
Sbjct: 287 AALAGHLQTCRLLLSYGSD 305
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 101/246 (41%), Gaps = 56/246 (22%)
Query: 1170 TPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTV 1229
TPLHL A +RV + +LLL++ A V K G PLH AC YG + LLL A V
Sbjct: 60 TPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACV-- 117
Query: 1230 PKNFPSRXXXXXXXXXXXXXXYTNTTD-QGFTPLHHSAQQGHSTIVALLLDRGASPNATN 1288
N D FTPLH +A + + +LLL GA P N
Sbjct: 118 -----------------------NAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVN 154
Query: 1289 ---KGFTPLHHSAQ---------QGHSTIVALLLDRGASPNATNKTRGF----------- 1325
K + + + +GHS + A R A KT
Sbjct: 155 CHGKSAVDMAPTPELRERLTYEFKGHSLLQAA---READLAKVKKTLALEIINFKQPQSH 211
Query: 1326 -TPLHIAC---HYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGA 1381
T LH A H + +A LLL + ANV+ TPLH +A++ H+ ++ +L GA
Sbjct: 212 ETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGA 271
Query: 1382 SPNATN 1387
NA +
Sbjct: 272 KMNALD 277
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 135/331 (40%), Gaps = 84/331 (25%)
Query: 1030 AAKEGQEE-VAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKN 1088
AA+ G EE + A+L + ++ + TPLHL Y +++ +LLLQ A V + K
Sbjct: 31 AARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKG 90
Query: 1089 GVTPLHVASHYDHQNVALLLLEKGA---SMD-----------------IATTLLEYGAKP 1128
G+ PLH A Y H V LLL+ GA +MD + + LL +GA P
Sbjct: 91 GLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADP 150
Query: 1129 NAESVAGFTPLHLSAS-----------EGHADMSAMLLEHGADVSHAAK----------- 1166
+ G + + ++ + +GH+ + A AD++ K
Sbjct: 151 TLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAA---READLAKVKKTLALEIINFKQ 207
Query: 1167 --NGLTPLHLCA----QEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLL 1220
+ T LH CA R VAELLL+ A V+ K TPLH+A + +L
Sbjct: 208 PQSHETALH-CAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVL 266
Query: 1221 LDQSANVTVPKNFPSRXXXXXXXXXXXXXXYTNTTDQ-GFTPLHHSAQQGHSTIVALLLD 1279
A + N D G T LH +A GH LLL
Sbjct: 267 HKHGAKM-------------------------NALDSLGQTALHRAALAGHLQTCRLLLS 301
Query: 1280 RGASPNATN-KGFTPLHHSAQQGHSTIVALL 1309
G+ P+ + +GFT +AQ G+ + +L
Sbjct: 302 YGSDPSIISLQGFT----AAQMGNEAVQQIL 328
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 95/234 (40%), Gaps = 55/234 (23%)
Query: 34 ITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPIS 93
+ PLH A +G + LLL GA ++ T LH AA V +LL GA +
Sbjct: 92 LVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPT 151
Query: 94 -----SKTKV----------------RGFYILRSGHEAVIEM--------LLEQGAPISS 124
K+ V +G +L++ EA + ++ P S
Sbjct: 152 LVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSH 211
Query: 125 KT--------------KVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDA 170
+T +VA +LL GA++ K TPLH+ + H V ++L + A
Sbjct: 212 ETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGA 271
Query: 171 PVDFQGKAPVDDVTVDYL--TALHVAAHCGHARVAKTLLDKKADPNARALNGFT 222
++ +D L TALH AA GH + + LL +DP+ +L GFT
Sbjct: 272 KMN----------ALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFT 315
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 34 ITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPIS 93
+TPLHVAA+ +++ +L GA ++ G TALH AA +GH +LL G+
Sbjct: 248 MTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSD-P 306
Query: 94 SKTKVRGFYILRSGHEAVIEMLLE 117
S ++GF + G+EAV ++L E
Sbjct: 307 SIISLQGFTAAQMGNEAVQQILSE 330
>pdb|3B7B|A Chain A, Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 1)
pdb|3B7B|B Chain B, Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 1)
pdb|3B95|A Chain A, Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 2)
pdb|3B95|B Chain B, Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 2)
Length = 237
Score = 112 bits (281), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 123/239 (51%), Gaps = 15/239 (6%)
Query: 980 LNFSNLRVREQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVA 1039
+NF + + +++PLH A+ G+VDI +L+Q GA +D+ ++D T L AA+ E
Sbjct: 2 MNFK-MEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAV 60
Query: 1040 AVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQK-DAPVDFQGKNGVTPLHVASH 1098
L++ GA + +G T LHL K GH +V + LL V+ Q G TP+ A+
Sbjct: 61 KYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATE 120
Query: 1099 YDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHG 1158
Y H ++ LLL KG+ ++I + N E++ LH +A G D++ +LL
Sbjct: 121 YKHVDLVKLLLSKGSDINI---------RDNEENIC----LHWAAFSGCVDIAEILLAAK 167
Query: 1159 ADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMA 1217
D+ +G +PLH+ A+E+R L L ++ V K+G TPL A Q+ A
Sbjct: 168 CDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQVWSA 226
Score = 86.7 bits (213), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 101/225 (44%), Gaps = 29/225 (12%)
Query: 26 FGSHFQHNITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEML 85
F Q+ +PLH AA+ G ++ +L+ GANID + D T L AA + H ++ L
Sbjct: 4 FKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYL 63
Query: 86 LEQGAPISSKTKVRGFYIL----RSGHEAVIEMLLEQGAPISSKTKVAAVLLENGASLTS 141
++ GA + K G L + GH V++ LL G +
Sbjct: 64 IKAGALVDPK-DAEGSTCLHLAAKKGHYEVVQYLLSNGQ----------------MDVNC 106
Query: 142 TTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKAPVDDVTVDYLTALHVAAHCGHAR 201
G+TP+ +Y H+ + KLLL K + ++ + LH AA G
Sbjct: 107 QDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEEN--------ICLHWAAFSGCVD 158
Query: 202 VAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASI 246
+A+ LL K D +A ++G +PLHIA ++NR V L L + +
Sbjct: 159 IAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDV 203
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 106/251 (42%), Gaps = 44/251 (17%)
Query: 847 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 906
R P LH A + + + +L++ GA+I+ +E + L A + N ++ V+ L+K GA +
Sbjct: 12 RSP-LHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALV 70
Query: 907 EATTEVREPMLHIACKKNRIKVVELLLKHGASSHVVSCYSNVKVHVSLNKIQDVSSSILR 966
+ LH+A KK +VV+ LL +G V+C QD
Sbjct: 71 DPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMD--VNC-------------QDDGG---- 111
Query: 967 LATCDVLPQCETRLNFSNLRVREQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTA 1026
TP+ A+ +VD+V LLL G+ ++ +
Sbjct: 112 ------------------------WTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENIC 147
Query: 1027 LHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQG 1086
LH AA G ++A +LL L + G +PLH+ + L L +D+ V +
Sbjct: 148 LHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKN 207
Query: 1087 KNGVTPLHVAS 1097
K G TPL AS
Sbjct: 208 KEGETPLQCAS 218
Score = 80.9 bits (198), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 12/205 (5%)
Query: 1025 TALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDF 1084
+ LH AA+ G ++ +L++ GA++ + ++ TPL + H++ K L++ A VD
Sbjct: 13 SPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDP 72
Query: 1085 QGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSAS 1144
+ G T LH+A+ H V LL G MD+ N + G+TP+ +
Sbjct: 73 KDAEGSTCLHLAAKKGHYEVVQYLLSNG-QMDV-----------NCQDDGGWTPMIWATE 120
Query: 1145 EGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTP 1204
H D+ +LL G+D++ LH A V +AE+LL + G +P
Sbjct: 121 YKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSP 180
Query: 1205 LHIACHYGQISMARLLLDQSANVTV 1229
LHIA + L L + ++VT+
Sbjct: 181 LHIAARENRYDCVVLFLSRDSDVTL 205
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 103/226 (45%), Gaps = 25/226 (11%)
Query: 1137 TPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDT 1196
+PLH +A GH D+ ML++ GA++ +++ TPL A+ + + + L+K A VD
Sbjct: 13 SPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDP 72
Query: 1197 PTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRXXXXXXXXXXXXXXYTNTTD 1256
+G T LH+A G + + LL +N + N D
Sbjct: 73 KDAEGSTCLHLAAKKGHYEVVQYLL---SNGQMDVNCQD--------------------D 109
Query: 1257 QGFTPLHHSAQQGHSTIVALLLDRGASPNA-TNKGFTPLHHSAQQGHSTIVALLLDRGAS 1315
G+TP+ + + H +V LLL +G+ N N+ LH +A G I +LL
Sbjct: 110 GGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCD 169
Query: 1316 PNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPL 1361
+A N G +PLHIA + L L + ++V+ +G TPL
Sbjct: 170 LHAVN-IHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPL 214
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 1/194 (0%)
Query: 219 NGFTPLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGAS 278
N +PLH A + + + +L++ GA+I+ +E + L A + N ++ V+ L+K GA
Sbjct: 10 NKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGAL 69
Query: 279 IEATTEVREPMLHIACKKNRIKVVELLLKHGA-SIEATTEVREPMLHIACKKNRIKVVEL 337
++ LH+A KK +VV+ LL +G + + + A + + +V+L
Sbjct: 70 VDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKL 129
Query: 338 LLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNR 397
LL G+ I LH A + + E+LL + A + LHIA ++NR
Sbjct: 130 LLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENR 189
Query: 398 IKVVELLLKHGASI 411
V L L + +
Sbjct: 190 YDCVVLFLSRDSDV 203
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 89/193 (46%), Gaps = 2/193 (1%)
Query: 352 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 411
R P LH A + + + +L++ GA+I+ +E + L A + N ++ V+ L+K GA +
Sbjct: 12 RSP-LHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALV 70
Query: 412 EATTEVREPMLHIACKKNRIKVVELLLKHGA-SIEATTEVREPMLHIACKKNRIKVVELL 470
+ LH+A KK +VV+ LL +G + + + A + + +V+LL
Sbjct: 71 DPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLL 130
Query: 471 LKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRI 530
L G+ I LH A + + E+LL + A + LHIA ++NR
Sbjct: 131 LSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRY 190
Query: 531 KVVELLLKHGASI 543
V L L + +
Sbjct: 191 DCVVLFLSRDSDV 203
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 89/193 (46%), Gaps = 2/193 (1%)
Query: 484 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 543
R P LH A + + + +L++ GA+I+ +E + L A + N ++ V+ L+K GA +
Sbjct: 12 RSP-LHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALV 70
Query: 544 EATTEVREPMLHIACKKNRIKVVELLLKHGA-SIEATTEVREPMLHIACKKNRIKVVELL 602
+ LH+A KK +VV+ LL +G + + + A + + +V+LL
Sbjct: 71 DPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLL 130
Query: 603 LKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRI 662
L G+ I LH A + + E+LL + A + LHIA ++NR
Sbjct: 131 LSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRY 190
Query: 663 KVVELLLKHGASI 675
V L L + +
Sbjct: 191 DCVVLFLSRDSDV 203
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 89/193 (46%), Gaps = 2/193 (1%)
Query: 616 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 675
R P LH A + + + +L++ GA+I+ +E + L A + N ++ V+ L+K GA +
Sbjct: 12 RSP-LHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALV 70
Query: 676 EATTEVREPMLHIACKKNRIKVVELLLKHGA-SIEATTEVREPMLHIACKKNRIKVVELL 734
+ LH+A KK +VV+ LL +G + + + A + + +V+LL
Sbjct: 71 DPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLL 130
Query: 735 LKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRI 794
L G+ I LH A + + E+LL + A + LHIA ++NR
Sbjct: 131 LSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRY 190
Query: 795 KVVELLLKHGASI 807
V L L + +
Sbjct: 191 DCVVLFLSRDSDV 203
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 89/193 (46%), Gaps = 2/193 (1%)
Query: 649 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 708
R P LH A + + + +L++ GA+I+ +E + L A + N ++ V+ L+K GA +
Sbjct: 12 RSP-LHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALV 70
Query: 709 EATTEVREPMLHIACKKNRIKVVELLLKHGA-SIEATTEVREPMLHIACKKNRIKVVELL 767
+ LH+A KK +VV+ LL +G + + + A + + +V+LL
Sbjct: 71 DPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLL 130
Query: 768 LKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRI 827
L G+ I LH A + + E+LL + A + LHIA ++NR
Sbjct: 131 LSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRY 190
Query: 828 KVVELLLKHGASI 840
V L L + +
Sbjct: 191 DCVVLFLSRDSDV 203
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 89/193 (46%), Gaps = 2/193 (1%)
Query: 682 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 741
R P LH A + + + +L++ GA+I+ +E + L A + N ++ V+ L+K GA +
Sbjct: 12 RSP-LHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALV 70
Query: 742 EATTEVREPMLHIACKKNRIKVVELLLKHGA-SIEATTEVREPMLHIACKKNRIKVVELL 800
+ LH+A KK +VV+ LL +G + + + A + + +V+LL
Sbjct: 71 DPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLL 130
Query: 801 LKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRI 860
L G+ I LH A + + E+LL + A + LHIA ++NR
Sbjct: 131 LSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRY 190
Query: 861 KVVELLLKHGASI 873
V L L + +
Sbjct: 191 DCVVLFLSRDSDV 203
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 89/193 (46%), Gaps = 2/193 (1%)
Query: 715 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 774
R P LH A + + + +L++ GA+I+ +E + L A + N ++ V+ L+K GA +
Sbjct: 12 RSP-LHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALV 70
Query: 775 EATTEVREPMLHIACKKNRIKVVELLLKHGA-SIEATTEVREPMLHIACKKNRIKVVELL 833
+ LH+A KK +VV+ LL +G + + + A + + +V+LL
Sbjct: 71 DPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLL 130
Query: 834 LKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRI 893
L G+ I LH A + + E+LL + A + LHIA ++NR
Sbjct: 131 LSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRY 190
Query: 894 KVVELLLKHGASI 906
V L L + +
Sbjct: 191 DCVVLFLSRDSDV 203
Score = 70.5 bits (171), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 87/187 (46%), Gaps = 2/187 (1%)
Query: 748 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 807
R P LH A + + + +L++ GA+I+ +E + L A + N ++ V+ L+K GA +
Sbjct: 12 RSP-LHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALV 70
Query: 808 EATTEVREPMLHIACKKNRIKVVELLLKHGA-SIEATTEVREPMLHIACKKNRIKVVELL 866
+ LH+A KK +VV+ LL +G + + + A + + +V+LL
Sbjct: 71 DPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLL 130
Query: 867 LKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRI 926
L G+ I LH A + + E+LL + A + LHIA ++NR
Sbjct: 131 LSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRY 190
Query: 927 KVVELLL 933
V L L
Sbjct: 191 DCVVLFL 197
Score = 70.5 bits (171), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 97/225 (43%), Gaps = 27/225 (12%)
Query: 1166 KNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSA 1225
+N +PLH A+ V + +L++ A +DT ++ TPL A + + L+ A
Sbjct: 9 QNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGA 68
Query: 1226 NVTVPKNFPSRXXXXXXXXXXXXXXYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGA-SP 1284
V PK+ +G T LH +A++GH +V LL G
Sbjct: 69 LVD-PKDA-----------------------EGSTCLHLAAKKGHYEVVQYLLSNGQMDV 104
Query: 1285 NATNK-GFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLL 1343
N + G+TP+ + + H +V LLL +G+ N + LH A G + +A +L
Sbjct: 105 NCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENIC-LHWAAFSGCVDIAEIL 163
Query: 1344 LDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATNK 1388
L ++ G +PLH +A++ V L L R + NK
Sbjct: 164 LAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNK 208
Score = 70.5 bits (171), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 86/191 (45%), Gaps = 1/191 (0%)
Query: 189 TALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEA 248
+ LH AA GH + L+ A+ + + + TPL A + N ++ V+ L+K GA ++
Sbjct: 13 SPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDP 72
Query: 249 TTEVREPMLHIACKKNRIKVVELLLKHGA-SIEATTEVREPMLHIACKKNRIKVVELLLK 307
LH+A KK +VV+ LL +G + + + A + + +V+LLL
Sbjct: 73 KDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLS 132
Query: 308 HGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKV 367
G+ I LH A + + E+LL + A + LHIA ++NR
Sbjct: 133 KGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDC 192
Query: 368 VELLLKHGASI 378
V L L + +
Sbjct: 193 VVLFLSRDSDV 203
>pdb|2XEE|A Chain A, Structural Determinants For Improved Thermal Stability Of
Designed Ankyrin Repeat Proteins With A Redesigned C-
Capping Module.
pdb|2XEE|B Chain B, Structural Determinants For Improved Thermal Stability Of
Designed Ankyrin Repeat Proteins With A Redesigned C-
Capping Module.
pdb|2XEE|C Chain C, Structural Determinants For Improved Thermal Stability Of
Designed Ankyrin Repeat Proteins With A Redesigned C-
Capping Module.
pdb|2XEE|D Chain D, Structural Determinants For Improved Thermal Stability Of
Designed Ankyrin Repeat Proteins With A Redesigned C-
Capping Module
Length = 157
Score = 112 bits (281), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 97/168 (57%), Gaps = 13/168 (7%)
Query: 1022 DLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAP 1081
DL L AA+ GQ++ +L+ NGA + + K G+TPLHL + GH+++ ++LL+ A
Sbjct: 1 DLGKKLLEAARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGAD 60
Query: 1082 VDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHL 1141
V+ + K+G TPLH+A+ H ++I LL+ GA NA+ G+TPLHL
Sbjct: 61 VNAKDKDGYTPLHLAAREGH-------------LEIVEVLLKAGADVNAKDKDGYTPLHL 107
Query: 1142 SASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLK 1189
+A EGH ++ +LL+ GADV+ K G TP L +AE+L K
Sbjct: 108 AAREGHLEIVEVLLKAGADVNAQDKFGKTPFDLAIDNGNEDIAEVLQK 155
Score = 110 bits (274), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 94/158 (59%), Gaps = 13/158 (8%)
Query: 997 ASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKG 1056
A+R G D V +L+ +GA V++ KD YT LH+AA+EG E+ VLL+ GA + + K G
Sbjct: 9 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 68
Query: 1057 FTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMD 1116
+TPLHL + GH+++ ++LL+ A V+ + K+G TPLH+A+ H ++
Sbjct: 69 YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGH-------------LE 115
Query: 1117 IATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAML 1154
I LL+ GA NA+ G TP L+ G+ D++ +L
Sbjct: 116 IVEVLLKAGADVNAQDKFGKTPFDLAIDNGNEDIAEVL 153
Score = 104 bits (260), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/125 (41%), Positives = 85/125 (68%)
Query: 984 NLRVREQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLL 1043
N + ++ TPLH+A+R G+++IV +LL+ GA V++ KD YT LH+AA+EG E+ VLL
Sbjct: 29 NAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLL 88
Query: 1044 ENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQN 1103
+ GA + + K G+TPLHL + GH+++ ++LL+ A V+ Q K G TP +A +++
Sbjct: 89 KAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTPFDLAIDNGNED 148
Query: 1104 VALLL 1108
+A +L
Sbjct: 149 IAEVL 153
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 79/128 (61%), Gaps = 2/128 (1%)
Query: 1262 LHHSAQQGHSTIVALLLDRGASPNATNK-GFTPLHHSAQQGHSTIVALLLDRGASPNATN 1320
L +A+ G V +L+ GA NA +K G+TPLH +A++GH IV +LL GA NA +
Sbjct: 6 LLEAARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKD 65
Query: 1321 KTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRG 1380
K G+TPLH+A G + + +LL A+V+ G+TPLH +A++GH IV +LL G
Sbjct: 66 KD-GYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAG 124
Query: 1381 ASPNATNK 1388
A NA +K
Sbjct: 125 ADVNAQDK 132
Score = 99.8 bits (247), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 87/156 (55%), Gaps = 13/156 (8%)
Query: 1065 KYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEY 1124
+ G ++L+ A V+ + K+G TPLH+A+ H ++I LL+
Sbjct: 11 RAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGH-------------LEIVEVLLKA 57
Query: 1125 GAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVA 1184
GA NA+ G+TPLHL+A EGH ++ +LL+ GADV+ K+G TPLHL A+E + +
Sbjct: 58 GADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIV 117
Query: 1185 ELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLL 1220
E+LLK A V+ K G TP +A G +A +L
Sbjct: 118 EVLLKAGADVNAQDKFGKTPFDLAIDNGNEDIAEVL 153
Score = 98.2 bits (243), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 74/128 (57%)
Query: 1106 LLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAA 1165
LL + D L+ GA NA+ G+TPLHL+A EGH ++ +LL+ GADV+
Sbjct: 6 LLEAARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKD 65
Query: 1166 KNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSA 1225
K+G TPLHL A+E + + E+LLK A V+ K G+TPLH+A G + + +LL A
Sbjct: 66 KDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGA 125
Query: 1226 NVTVPKNF 1233
+V F
Sbjct: 126 DVNAQDKF 133
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 1253 NTTDQ-GFTPLHHSAQQGHSTIVALLLDRGASPNATNK-GFTPLHHSAQQGHSTIVALLL 1310
N D+ G+TPLH +A++GH IV +LL GA NA +K G+TPLH +A++GH IV +LL
Sbjct: 29 NAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLL 88
Query: 1311 DRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHS 1370
GA NA +K G+TPLH+A G + + +LL A+V+ G TP + G+
Sbjct: 89 KAGADVNAKDKD-GYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTPFDLAIDNGNE 147
Query: 1371 TIVALL 1376
I +L
Sbjct: 148 DIAEVL 153
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 88/149 (59%), Gaps = 25/149 (16%)
Query: 40 AAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISSKTKVR 99
AA+ G+ + V +L++ GA+++ K +DG T LH AAR GH ++E+LL+ GA +++K K
Sbjct: 9 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDK-D 67
Query: 100 GFYIL----RSGHEAVIEMLLEQGAPISSKTKVAAVLLENGASLTSTTKKGFTPLHLTGK 155
G+ L R GH ++E+LL+ GA +++K K G+TPLHL +
Sbjct: 68 GYTPLHLAAREGHLEIVEVLLKAGADVNAK-----------------DKDGYTPLHLAAR 110
Query: 156 YGHIKVAKLLLQKDAPVDFQ---GKAPVD 181
GH+++ ++LL+ A V+ Q GK P D
Sbjct: 111 EGHLEIVEVLLKAGADVNAQDKFGKTPFD 139
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 84/147 (57%)
Query: 194 AAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVR 253
AA G + L+ AD NA+ +G+TPLH+A ++ +++VE+LLK GA + A +
Sbjct: 9 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 68
Query: 254 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 313
LH+A ++ +++VE+LLK GA + A + LH+A ++ +++VE+LLK GA +
Sbjct: 69 YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 128
Query: 314 ATTEVREPMLHIACKKNRIKVVELLLK 340
A + + +A + E+L K
Sbjct: 129 AQDKFGKTPFDLAIDNGNEDIAEVLQK 155
Score = 83.2 bits (204), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 71/122 (58%)
Query: 186 DYLTALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGAS 245
D T LH+AA GH + + LL AD NA+ +G+TPLH+A ++ +++VE+LLK GA
Sbjct: 34 DGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGAD 93
Query: 246 IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 305
+ A + LH+A ++ +++VE+LLK GA + A + + +A + E+L
Sbjct: 94 VNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTPFDLAIDNGNEDIAEVL 153
Query: 306 LK 307
K
Sbjct: 154 QK 155
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 77/139 (55%), Gaps = 22/139 (15%)
Query: 31 QHNITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGA 90
+ TPLH+AA+ G +V +LL GA+++ K +DG T LH AAR GH ++E+LL+ GA
Sbjct: 33 KDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGA 92
Query: 91 PISSKTKVRGFYIL----RSGHEAVIEMLLEQGAPISSKTKVAAVLLENGASLTSTTKKG 146
+++K K G+ L R GH ++E+LL+ GA ++++ K G
Sbjct: 93 DVNAKDK-DGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKF-----------------G 134
Query: 147 FTPLHLTGKYGHIKVAKLL 165
TP L G+ +A++L
Sbjct: 135 KTPFDLAIDNGNEDIAEVL 153
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 81/147 (55%)
Query: 227 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 286
A + + V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A +
Sbjct: 9 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 68
Query: 287 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 346
LH+A ++ +++VE+LLK GA + A + LH+A ++ +++VE+LLK GA +
Sbjct: 69 YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 128
Query: 347 ATTEVREPMLHIACKKNRIKVVELLLK 373
A + + +A + E+L K
Sbjct: 129 AQDKFGKTPFDLAIDNGNEDIAEVLQK 155
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 81/147 (55%)
Query: 260 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 319
A + + V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A +
Sbjct: 9 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 68
Query: 320 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 379
LH+A ++ +++VE+LLK GA + A + LH+A ++ +++VE+LLK GA +
Sbjct: 69 YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 128
Query: 380 ATTEVREPMLHIACKKNRIKVVELLLK 406
A + + +A + E+L K
Sbjct: 129 AQDKFGKTPFDLAIDNGNEDIAEVLQK 155
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 81/147 (55%)
Query: 293 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 352
A + + V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A +
Sbjct: 9 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 68
Query: 353 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 412
LH+A ++ +++VE+LLK GA + A + LH+A ++ +++VE+LLK GA +
Sbjct: 69 YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 128
Query: 413 ATTEVREPMLHIACKKNRIKVVELLLK 439
A + + +A + E+L K
Sbjct: 129 AQDKFGKTPFDLAIDNGNEDIAEVLQK 155
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 81/147 (55%)
Query: 326 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 385
A + + V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A +
Sbjct: 9 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 68
Query: 386 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 445
LH+A ++ +++VE+LLK GA + A + LH+A ++ +++VE+LLK GA +
Sbjct: 69 YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 128
Query: 446 ATTEVREPMLHIACKKNRIKVVELLLK 472
A + + +A + E+L K
Sbjct: 129 AQDKFGKTPFDLAIDNGNEDIAEVLQK 155
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 81/147 (55%)
Query: 359 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 418
A + + V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A +
Sbjct: 9 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 68
Query: 419 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 478
LH+A ++ +++VE+LLK GA + A + LH+A ++ +++VE+LLK GA +
Sbjct: 69 YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 128
Query: 479 ATTEVREPMLHIACKKNRIKVVELLLK 505
A + + +A + E+L K
Sbjct: 129 AQDKFGKTPFDLAIDNGNEDIAEVLQK 155
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 81/147 (55%)
Query: 392 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 451
A + + V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A +
Sbjct: 9 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 68
Query: 452 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 511
LH+A ++ +++VE+LLK GA + A + LH+A ++ +++VE+LLK GA +
Sbjct: 69 YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 128
Query: 512 ATTEVREPMLHIACKKNRIKVVELLLK 538
A + + +A + E+L K
Sbjct: 129 AQDKFGKTPFDLAIDNGNEDIAEVLQK 155
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 81/147 (55%)
Query: 425 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 484
A + + V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A +
Sbjct: 9 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 68
Query: 485 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 544
LH+A ++ +++VE+LLK GA + A + LH+A ++ +++VE+LLK GA +
Sbjct: 69 YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 128
Query: 545 ATTEVREPMLHIACKKNRIKVVELLLK 571
A + + +A + E+L K
Sbjct: 129 AQDKFGKTPFDLAIDNGNEDIAEVLQK 155
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 81/147 (55%)
Query: 458 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 517
A + + V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A +
Sbjct: 9 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 68
Query: 518 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 577
LH+A ++ +++VE+LLK GA + A + LH+A ++ +++VE+LLK GA +
Sbjct: 69 YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 128
Query: 578 ATTEVREPMLHIACKKNRIKVVELLLK 604
A + + +A + E+L K
Sbjct: 129 AQDKFGKTPFDLAIDNGNEDIAEVLQK 155
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 81/147 (55%)
Query: 491 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 550
A + + V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A +
Sbjct: 9 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 68
Query: 551 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 610
LH+A ++ +++VE+LLK GA + A + LH+A ++ +++VE+LLK GA +
Sbjct: 69 YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 128
Query: 611 ATTEVREPMLHIACKKNRIKVVELLLK 637
A + + +A + E+L K
Sbjct: 129 AQDKFGKTPFDLAIDNGNEDIAEVLQK 155
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 81/147 (55%)
Query: 524 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 583
A + + V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A +
Sbjct: 9 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 68
Query: 584 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 643
LH+A ++ +++VE+LLK GA + A + LH+A ++ +++VE+LLK GA +
Sbjct: 69 YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 128
Query: 644 ATTEVREPMLHIACKKNRIKVVELLLK 670
A + + +A + E+L K
Sbjct: 129 AQDKFGKTPFDLAIDNGNEDIAEVLQK 155
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 81/147 (55%)
Query: 557 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 616
A + + V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A +
Sbjct: 9 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 68
Query: 617 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 676
LH+A ++ +++VE+LLK GA + A + LH+A ++ +++VE+LLK GA +
Sbjct: 69 YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 128
Query: 677 ATTEVREPMLHIACKKNRIKVVELLLK 703
A + + +A + E+L K
Sbjct: 129 AQDKFGKTPFDLAIDNGNEDIAEVLQK 155
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 81/147 (55%)
Query: 590 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 649
A + + V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A +
Sbjct: 9 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 68
Query: 650 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 709
LH+A ++ +++VE+LLK GA + A + LH+A ++ +++VE+LLK GA +
Sbjct: 69 YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 128
Query: 710 ATTEVREPMLHIACKKNRIKVVELLLK 736
A + + +A + E+L K
Sbjct: 129 AQDKFGKTPFDLAIDNGNEDIAEVLQK 155
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 81/147 (55%)
Query: 623 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 682
A + + V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A +
Sbjct: 9 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 68
Query: 683 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 742
LH+A ++ +++VE+LLK GA + A + LH+A ++ +++VE+LLK GA +
Sbjct: 69 YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 128
Query: 743 ATTEVREPMLHIACKKNRIKVVELLLK 769
A + + +A + E+L K
Sbjct: 129 AQDKFGKTPFDLAIDNGNEDIAEVLQK 155
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 81/147 (55%)
Query: 656 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 715
A + + V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A +
Sbjct: 9 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 68
Query: 716 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 775
LH+A ++ +++VE+LLK GA + A + LH+A ++ +++VE+LLK GA +
Sbjct: 69 YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 128
Query: 776 ATTEVREPMLHIACKKNRIKVVELLLK 802
A + + +A + E+L K
Sbjct: 129 AQDKFGKTPFDLAIDNGNEDIAEVLQK 155
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 81/147 (55%)
Query: 689 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 748
A + + V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A +
Sbjct: 9 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 68
Query: 749 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 808
LH+A ++ +++VE+LLK GA + A + LH+A ++ +++VE+LLK GA +
Sbjct: 69 YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 128
Query: 809 ATTEVREPMLHIACKKNRIKVVELLLK 835
A + + +A + E+L K
Sbjct: 129 AQDKFGKTPFDLAIDNGNEDIAEVLQK 155
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 81/147 (55%)
Query: 722 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 781
A + + V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A +
Sbjct: 9 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 68
Query: 782 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 841
LH+A ++ +++VE+LLK GA + A + LH+A ++ +++VE+LLK GA +
Sbjct: 69 YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 128
Query: 842 ATTEVREPMLHIACKKNRIKVVELLLK 868
A + + +A + E+L K
Sbjct: 129 AQDKFGKTPFDLAIDNGNEDIAEVLQK 155
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 81/147 (55%)
Query: 755 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 814
A + + V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A +
Sbjct: 9 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 68
Query: 815 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 874
LH+A ++ +++VE+LLK GA + A + LH+A ++ +++VE+LLK GA +
Sbjct: 69 YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 128
Query: 875 ATTEVREPMLHIACKKNRIKVVELLLK 901
A + + +A + E+L K
Sbjct: 129 AQDKFGKTPFDLAIDNGNEDIAEVLQK 155
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 81/147 (55%)
Query: 788 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 847
A + + V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A +
Sbjct: 9 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 68
Query: 848 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 907
LH+A ++ +++VE+LLK GA + A + LH+A ++ +++VE+LLK GA +
Sbjct: 69 YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 128
Query: 908 ATTEVREPMLHIACKKNRIKVVELLLK 934
A + + +A + E+L K
Sbjct: 129 AQDKFGKTPFDLAIDNGNEDIAEVLQK 155
Score = 74.7 bits (182), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 82/149 (55%)
Query: 821 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 880
A + + V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A +
Sbjct: 9 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 68
Query: 881 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASSH 940
LH+A ++ +++VE+LLK GA + A + LH+A ++ +++VE+LLK GA +
Sbjct: 69 YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 128
Query: 941 VVSCYSNVKVHVSLNKIQDVSSSILRLAT 969
+ ++++ + + +L+ A
Sbjct: 129 AQDKFGKTPFDLAIDNGNEDIAEVLQKAA 157
Score = 70.9 bits (172), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 90/189 (47%), Gaps = 44/189 (23%)
Query: 854 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 913
A + + V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A +
Sbjct: 9 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 68
Query: 914 EPMLHIACKKNRIKVVELLLKHGASSHVVSCYSNVKVHVSLNKIQDVSSSILRLATCDVL 973
LH+A ++ +++VE+LLK GA DV
Sbjct: 69 YTPLHLAAREGHLEIVEVLLKAGA---------------------DV------------- 94
Query: 974 PQCETRLNFSNLRVREQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKE 1033
N + ++ TPLH+A+R G+++IV +LL+ GA V++ K T +A
Sbjct: 95 ----------NAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTPFDLAIDN 144
Query: 1034 GQEEVAAVL 1042
G E++A VL
Sbjct: 145 GNEDIAEVL 153
>pdb|1N0R|A Chain A, 4ank: A Designed Ankyrin Repeat Protein With Four Identical
Consensus Repeats
Length = 126
Score = 112 bits (280), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/123 (48%), Positives = 84/123 (68%)
Query: 991 QTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLT 1050
+TPLH+A+R G++++V LLL+ GA V++ K+ T LH+AA+ G EV +LLE GA +
Sbjct: 3 RTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVN 62
Query: 1051 STTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLE 1110
+ K G TPLHL + GH++V KLLL+ A V+ + KNG TPLH+A+ H V LLLE
Sbjct: 63 AKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLE 122
Query: 1111 KGA 1113
GA
Sbjct: 123 AGA 125
Score = 107 bits (268), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/126 (47%), Positives = 81/126 (64%), Gaps = 2/126 (1%)
Query: 1257 QGFTPLHHSAQQGHSTIVALLLDRGASPNATNK-GFTPLHHSAQQGHSTIVALLLDRGAS 1315
G TPLH +A+ GH +V LLL+ GA NA +K G TPLH +A+ GH +V LLL+ GA
Sbjct: 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60
Query: 1316 PNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVAL 1375
NA +K G TPLH+A G + + +LLL+ A+V+ G TPLH +A+ GH +V L
Sbjct: 61 VNAKDKN-GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKL 119
Query: 1376 LLDRGA 1381
LL+ GA
Sbjct: 120 LLEAGA 125
Score = 104 bits (259), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/137 (45%), Positives = 82/137 (59%), Gaps = 13/137 (9%)
Query: 1056 GFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASM 1115
G TPLHL + GH++V KLLL+ A V+ + KNG TPLH+A+ H V LLLE GA +
Sbjct: 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61
Query: 1116 DIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLC 1175
NA+ G TPLHL+A GH ++ +LLE GADV+ KNG TPLHL
Sbjct: 62 -------------NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLA 108
Query: 1176 AQEDRVGVAELLLKNNA 1192
A+ + V +LLL+ A
Sbjct: 109 ARNGHLEVVKLLLEAGA 125
Score = 103 bits (257), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 80/135 (59%), Gaps = 13/135 (9%)
Query: 1025 TALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDF 1084
T LH+AA+ G EV +LLE GA + + K G TPLHL + GH++V KLLL+ A V+
Sbjct: 4 TPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNA 63
Query: 1085 QGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSAS 1144
+ KNG TPLH+A+ H V LLLE GA + NA+ G TPLHL+A
Sbjct: 64 KDKNGRTPLHLAARNGHLEVVKLLLEAGADV-------------NAKDKNGRTPLHLAAR 110
Query: 1145 EGHADMSAMLLEHGA 1159
GH ++ +LLE GA
Sbjct: 111 NGHLEVVKLLLEAGA 125
Score = 100 bits (250), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 79/138 (57%), Gaps = 13/138 (9%)
Query: 1088 NGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGH 1147
NG TPLH+A+ H V LLLE GA + NA+ G TPLHL+A GH
Sbjct: 1 NGRTPLHLAARNGHLEVVKLLLEAGADV-------------NAKDKNGRTPLHLAARNGH 47
Query: 1148 ADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHI 1207
++ +LLE GADV+ KNG TPLHL A+ + V +LLL+ A V+ K G TPLH+
Sbjct: 48 LEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHL 107
Query: 1208 ACHYGQISMARLLLDQSA 1225
A G + + +LLL+ A
Sbjct: 108 AARNGHLEVVKLLLEAGA 125
Score = 96.7 bits (239), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 81/149 (54%), Gaps = 26/149 (17%)
Query: 1135 GFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQV 1194
G TPLHL+A GH ++ +LLE GADV+ KNG TPLHL A+ + V +LLL+ A V
Sbjct: 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61
Query: 1195 DTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRXXXXXXXXXXXXXXYTNT 1254
+ K G TPLH+A G + + +LLL+ A+V N
Sbjct: 62 NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV-------------------------NA 96
Query: 1255 TDQ-GFTPLHHSAQQGHSTIVALLLDRGA 1282
D+ G TPLH +A+ GH +V LLL+ GA
Sbjct: 97 KDKNGRTPLHLAARNGHLEVVKLLLEAGA 125
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/140 (41%), Positives = 84/140 (60%), Gaps = 22/140 (15%)
Query: 35 TPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISS 94
TPLH+AA+ G +V LLL GA+++ K ++G T LH AAR+GH V+++LLE GA +++
Sbjct: 4 TPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNA 63
Query: 95 KTKVRGFYIL----RSGHEAVIEMLLEQGAPISSKTKVAAVLLENGASLTSTTKKGFTPL 150
K K G L R+GH V+++LLE GA +++K K G TPL
Sbjct: 64 KDK-NGRTPLHLAARNGHLEVVKLLLEAGADVNAK-----------------DKNGRTPL 105
Query: 151 HLTGKYGHIKVAKLLLQKDA 170
HL + GH++V KLLL+ A
Sbjct: 106 HLAARNGHLEVVKLLLEAGA 125
Score = 94.0 bits (232), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 80/132 (60%), Gaps = 8/132 (6%)
Query: 146 GFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKAPVDDVTVDYLTALHVAAHCGHARVAKT 205
G TPLHL + GH++V KLLL+ A V+ + K + T LH+AA GH V K
Sbjct: 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDK--------NGRTPLHLAARNGHLEVVKL 53
Query: 206 LLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNR 265
LL+ AD NA+ NG TPLH+A + ++VV+LLL+ GA + A + LH+A +
Sbjct: 54 LLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 113
Query: 266 IKVVELLLKHGA 277
++VV+LLL+ GA
Sbjct: 114 LEVVKLLLEAGA 125
Score = 92.4 bits (228), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 81/150 (54%), Gaps = 27/150 (18%)
Query: 1167 NGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSAN 1226
NG TPLHL A+ + V +LLL+ A V+ K G TPLH+A G + + +LLL+ A+
Sbjct: 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60
Query: 1227 VTVPKNFPSRXXXXXXXXXXXXXXYTNTTDQ-GFTPLHHSAQQGHSTIVALLLDRGASPN 1285
V N D+ G TPLH +A+ GH +V LLL+ GA N
Sbjct: 61 V-------------------------NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVN 95
Query: 1286 ATNK-GFTPLHHSAQQGHSTIVALLLDRGA 1314
A +K G TPLH +A+ GH +V LLL+ GA
Sbjct: 96 AKDKNGRTPLHLAARNGHLEVVKLLLEAGA 125
Score = 90.1 bits (222), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 76/122 (62%)
Query: 189 TALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEA 248
T LH+AA GH V K LL+ AD NA+ NG TPLH+A + ++VV+LLL+ GA + A
Sbjct: 4 TPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNA 63
Query: 249 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 308
+ LH+A + ++VV+LLL+ GA + A + LH+A + ++VV+LLL+
Sbjct: 64 KDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEA 123
Query: 309 GA 310
GA
Sbjct: 124 GA 125
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 79/140 (56%), Gaps = 25/140 (17%)
Query: 105 RSGHEAVIEMLLEQGAPISSKTKVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKL 164
R+GH V+++LLE GA +++K K G TPLHL + GH++V KL
Sbjct: 11 RNGHLEVVKLLLEAGADVNAKDK-----------------NGRTPLHLAARNGHLEVVKL 53
Query: 165 LLQKDAPVDFQGKAPVDDVTVDYLTALHVAAHCGHARVAKTLLDKKADPNARALNGFTPL 224
LL+ A V+ + K + T LH+AA GH V K LL+ AD NA+ NG TPL
Sbjct: 54 LLEAGADVNAKDK--------NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPL 105
Query: 225 HIACKKNRIKVVELLLKHGA 244
H+A + ++VV+LLL+ GA
Sbjct: 106 HLAARNGHLEVVKLLLEAGA 125
Score = 86.7 bits (213), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 63/99 (63%), Gaps = 1/99 (1%)
Query: 1290 GFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSAN 1349
G TPLH +A+ GH +V LLL+ GA NA +K G TPLH+A G + + +LLL+ A+
Sbjct: 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKN-GRTPLHLAARNGHLEVVKLLLEAGAD 60
Query: 1350 VSCTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATNK 1388
V+ G TPLH +A+ GH +V LLL+ GA NA +K
Sbjct: 61 VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDK 99
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 66/97 (68%)
Query: 984 NLRVREQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLL 1043
N + + +TPLH+A+R G++++V LLL+ GA V++ K+ T LH+AA+ G EV +LL
Sbjct: 29 NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL 88
Query: 1044 ENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDA 1080
E GA + + K G TPLHL + GH++V KLLL+ A
Sbjct: 89 EAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 125
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 77/125 (61%)
Query: 219 NGFTPLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGAS 278
NG TPLH+A + ++VV+LLL+ GA + A + LH+A + ++VV+LLL+ GA
Sbjct: 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60
Query: 279 IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 338
+ A + LH+A + ++VV+LLL+ GA + A + LH+A + ++VV+LL
Sbjct: 61 VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLL 120
Query: 339 LKHGA 343
L+ GA
Sbjct: 121 LEAGA 125
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 75/124 (60%), Gaps = 1/124 (0%)
Query: 253 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 312
R P LH+A + ++VV+LLL+ GA + A + LH+A + ++VV+LLL+ GA +
Sbjct: 3 RTP-LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61
Query: 313 EATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLL 372
A + LH+A + ++VV+LLL+ GA + A + LH+A + ++VV+LLL
Sbjct: 62 NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL 121
Query: 373 KHGA 376
+ GA
Sbjct: 122 EAGA 125
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 75/124 (60%), Gaps = 1/124 (0%)
Query: 286 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 345
R P LH+A + ++VV+LLL+ GA + A + LH+A + ++VV+LLL+ GA +
Sbjct: 3 RTP-LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61
Query: 346 EATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLL 405
A + LH+A + ++VV+LLL+ GA + A + LH+A + ++VV+LLL
Sbjct: 62 NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL 121
Query: 406 KHGA 409
+ GA
Sbjct: 122 EAGA 125
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 75/124 (60%), Gaps = 1/124 (0%)
Query: 319 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 378
R P LH+A + ++VV+LLL+ GA + A + LH+A + ++VV+LLL+ GA +
Sbjct: 3 RTP-LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61
Query: 379 EATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLL 438
A + LH+A + ++VV+LLL+ GA + A + LH+A + ++VV+LLL
Sbjct: 62 NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL 121
Query: 439 KHGA 442
+ GA
Sbjct: 122 EAGA 125
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 75/124 (60%), Gaps = 1/124 (0%)
Query: 352 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 411
R P LH+A + ++VV+LLL+ GA + A + LH+A + ++VV+LLL+ GA +
Sbjct: 3 RTP-LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61
Query: 412 EATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLL 471
A + LH+A + ++VV+LLL+ GA + A + LH+A + ++VV+LLL
Sbjct: 62 NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL 121
Query: 472 KHGA 475
+ GA
Sbjct: 122 EAGA 125
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 75/124 (60%), Gaps = 1/124 (0%)
Query: 385 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 444
R P LH+A + ++VV+LLL+ GA + A + LH+A + ++VV+LLL+ GA +
Sbjct: 3 RTP-LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61
Query: 445 EATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLL 504
A + LH+A + ++VV+LLL+ GA + A + LH+A + ++VV+LLL
Sbjct: 62 NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL 121
Query: 505 KHGA 508
+ GA
Sbjct: 122 EAGA 125
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 75/124 (60%), Gaps = 1/124 (0%)
Query: 418 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 477
R P LH+A + ++VV+LLL+ GA + A + LH+A + ++VV+LLL+ GA +
Sbjct: 3 RTP-LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61
Query: 478 EATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLL 537
A + LH+A + ++VV+LLL+ GA + A + LH+A + ++VV+LLL
Sbjct: 62 NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL 121
Query: 538 KHGA 541
+ GA
Sbjct: 122 EAGA 125
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 75/124 (60%), Gaps = 1/124 (0%)
Query: 451 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 510
R P LH+A + ++VV+LLL+ GA + A + LH+A + ++VV+LLL+ GA +
Sbjct: 3 RTP-LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61
Query: 511 EATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLL 570
A + LH+A + ++VV+LLL+ GA + A + LH+A + ++VV+LLL
Sbjct: 62 NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL 121
Query: 571 KHGA 574
+ GA
Sbjct: 122 EAGA 125
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 75/124 (60%), Gaps = 1/124 (0%)
Query: 484 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 543
R P LH+A + ++VV+LLL+ GA + A + LH+A + ++VV+LLL+ GA +
Sbjct: 3 RTP-LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61
Query: 544 EATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLL 603
A + LH+A + ++VV+LLL+ GA + A + LH+A + ++VV+LLL
Sbjct: 62 NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL 121
Query: 604 KHGA 607
+ GA
Sbjct: 122 EAGA 125
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 75/124 (60%), Gaps = 1/124 (0%)
Query: 517 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 576
R P LH+A + ++VV+LLL+ GA + A + LH+A + ++VV+LLL+ GA +
Sbjct: 3 RTP-LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61
Query: 577 EATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLL 636
A + LH+A + ++VV+LLL+ GA + A + LH+A + ++VV+LLL
Sbjct: 62 NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL 121
Query: 637 KHGA 640
+ GA
Sbjct: 122 EAGA 125
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 75/124 (60%), Gaps = 1/124 (0%)
Query: 550 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 609
R P LH+A + ++VV+LLL+ GA + A + LH+A + ++VV+LLL+ GA +
Sbjct: 3 RTP-LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61
Query: 610 EATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLL 669
A + LH+A + ++VV+LLL+ GA + A + LH+A + ++VV+LLL
Sbjct: 62 NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL 121
Query: 670 KHGA 673
+ GA
Sbjct: 122 EAGA 125
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 75/124 (60%), Gaps = 1/124 (0%)
Query: 583 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 642
R P LH+A + ++VV+LLL+ GA + A + LH+A + ++VV+LLL+ GA +
Sbjct: 3 RTP-LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61
Query: 643 EATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLL 702
A + LH+A + ++VV+LLL+ GA + A + LH+A + ++VV+LLL
Sbjct: 62 NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL 121
Query: 703 KHGA 706
+ GA
Sbjct: 122 EAGA 125
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 75/124 (60%), Gaps = 1/124 (0%)
Query: 616 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 675
R P LH+A + ++VV+LLL+ GA + A + LH+A + ++VV+LLL+ GA +
Sbjct: 3 RTP-LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61
Query: 676 EATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLL 735
A + LH+A + ++VV+LLL+ GA + A + LH+A + ++VV+LLL
Sbjct: 62 NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL 121
Query: 736 KHGA 739
+ GA
Sbjct: 122 EAGA 125
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 75/124 (60%), Gaps = 1/124 (0%)
Query: 649 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 708
R P LH+A + ++VV+LLL+ GA + A + LH+A + ++VV+LLL+ GA +
Sbjct: 3 RTP-LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61
Query: 709 EATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLL 768
A + LH+A + ++VV+LLL+ GA + A + LH+A + ++VV+LLL
Sbjct: 62 NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL 121
Query: 769 KHGA 772
+ GA
Sbjct: 122 EAGA 125
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 75/124 (60%), Gaps = 1/124 (0%)
Query: 682 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 741
R P LH+A + ++VV+LLL+ GA + A + LH+A + ++VV+LLL+ GA +
Sbjct: 3 RTP-LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61
Query: 742 EATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLL 801
A + LH+A + ++VV+LLL+ GA + A + LH+A + ++VV+LLL
Sbjct: 62 NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL 121
Query: 802 KHGA 805
+ GA
Sbjct: 122 EAGA 125
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 75/124 (60%), Gaps = 1/124 (0%)
Query: 715 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 774
R P LH+A + ++VV+LLL+ GA + A + LH+A + ++VV+LLL+ GA +
Sbjct: 3 RTP-LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61
Query: 775 EATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLL 834
A + LH+A + ++VV+LLL+ GA + A + LH+A + ++VV+LLL
Sbjct: 62 NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL 121
Query: 835 KHGA 838
+ GA
Sbjct: 122 EAGA 125
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 75/124 (60%), Gaps = 1/124 (0%)
Query: 748 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 807
R P LH+A + ++VV+LLL+ GA + A + LH+A + ++VV+LLL+ GA +
Sbjct: 3 RTP-LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61
Query: 808 EATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLL 867
A + LH+A + ++VV+LLL+ GA + A + LH+A + ++VV+LLL
Sbjct: 62 NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL 121
Query: 868 KHGA 871
+ GA
Sbjct: 122 EAGA 125
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 75/124 (60%), Gaps = 1/124 (0%)
Query: 781 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 840
R P LH+A + ++VV+LLL+ GA + A + LH+A + ++VV+LLL+ GA +
Sbjct: 3 RTP-LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61
Query: 841 EATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLL 900
A + LH+A + ++VV+LLL+ GA + A + LH+A + ++VV+LLL
Sbjct: 62 NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL 121
Query: 901 KHGA 904
+ GA
Sbjct: 122 EAGA 125
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 75/124 (60%), Gaps = 1/124 (0%)
Query: 814 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 873
R P LH+A + ++VV+LLL+ GA + A + LH+A + ++VV+LLL+ GA +
Sbjct: 3 RTP-LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61
Query: 874 EATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLL 933
A + LH+A + ++VV+LLL+ GA + A + LH+A + ++VV+LLL
Sbjct: 62 NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL 121
Query: 934 KHGA 937
+ GA
Sbjct: 122 EAGA 125
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 45/168 (26%)
Query: 847 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 906
R P LH+A + ++VV+LLL+ GA + A + LH+A + ++VV+LLL+ GA +
Sbjct: 3 RTP-LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61
Query: 907 EATTEVREPMLHIACKKNRIKVVELLLKHGASSHVVSCYSNVKVHVSLNKIQDVSSSILR 966
A + LH+A + ++VV+LLL+ GA DV
Sbjct: 62 NAKDKNGRTPLHLAARNGHLEVVKLLLEAGA---------------------DV------ 94
Query: 967 LATCDVLPQCETRLNFSNLRVREQQTPLHIASRLGNVDIVMLLLQHGA 1014
N + + +TPLH+A+R G++++V LLL+ GA
Sbjct: 95 -----------------NAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 125
>pdb|4HB5|A Chain A, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or267.
pdb|4HB5|B Chain B, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or267
Length = 169
Score = 112 bits (279), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/124 (45%), Positives = 79/124 (63%), Gaps = 2/124 (1%)
Query: 1265 SAQQGHSTIVALLLDRGASPNATN-KGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTR 1323
+A+ G+ V LL+ GA PNA++ G TPLH++A+ GH IV LLL +GA PNA + +
Sbjct: 11 AAENGNKDRVKDLLENGADPNASDSDGRTPLHYAAENGHKEIVKLLLSKGADPNAKD-SD 69
Query: 1324 GFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGASP 1383
G TPLH A G + +LLL + A+ + G TPLH++A+ GH IV LLL +GA P
Sbjct: 70 GRTPLHYAAENGHKEIVKLLLSKGADPNAKDSDGRTPLHYAAENGHKEIVKLLLSKGADP 129
Query: 1384 NATN 1387
N ++
Sbjct: 130 NTSD 133
Score = 110 bits (276), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/131 (45%), Positives = 81/131 (61%), Gaps = 3/131 (2%)
Query: 1253 NTTD-QGFTPLHHSAQQGHSTIVALLLDRGASPNATN-KGFTPLHHSAQQGHSTIVALLL 1310
N +D G TPLH++A+ GH IV LLL +GA PNA + G TPLH++A+ GH IV LLL
Sbjct: 31 NASDSDGRTPLHYAAENGHKEIVKLLLSKGADPNAKDSDGRTPLHYAAENGHKEIVKLLL 90
Query: 1311 DRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHS 1370
+GA PNA + + G TPLH A G + +LLL + A+ + + G TPL + + G+
Sbjct: 91 SKGADPNAKD-SDGRTPLHYAAENGHKEIVKLLLSKGADPNTSDSDGRTPLDLAREHGNE 149
Query: 1371 TIVALLLDRGA 1381
IV LL +G
Sbjct: 150 EIVKLLEKQGG 160
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 86/166 (51%), Gaps = 13/166 (7%)
Query: 1030 AAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNG 1089
AA+ G ++ LLENGA ++ G TPLH + GH ++ KLLL K A + + +G
Sbjct: 11 AAENGNKDRVKDLLENGADPNASDSDGRTPLHYAAENGHKEIVKLLLSKGADPNAKDSDG 70
Query: 1090 VTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHAD 1149
TPLH A+ H+ + LLL KGA PNA+ G TPLH +A GH +
Sbjct: 71 RTPLHYAAENGHKEIVKLLLSKGAD-------------PNAKDSDGRTPLHYAAENGHKE 117
Query: 1150 MSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVD 1195
+ +LL GAD + + +G TPL L + + +LL K ++
Sbjct: 118 IVKLLLSKGADPNTSDSDGRTPLDLAREHGNEEIVKLLEKQGGWLE 163
Score = 93.6 bits (231), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 83/163 (50%), Gaps = 13/163 (7%)
Query: 997 ASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKG 1056
A+ GN D V LL++GA +++ D T LH AA+ G +E+ +LL GA + G
Sbjct: 11 AAENGNKDRVKDLLENGADPNASDSDGRTPLHYAAENGHKEIVKLLLSKGADPNAKDSDG 70
Query: 1057 FTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMD 1116
TPLH + GH ++ KLLL K A + + +G TPLH A+ H+ + LLL KGA
Sbjct: 71 RTPLHYAAENGHKEIVKLLLSKGADPNAKDSDGRTPLHYAAENGHKEIVKLLLSKGAD-- 128
Query: 1117 IATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGA 1159
PN G TPL L+ G+ ++ +L + G
Sbjct: 129 -----------PNTSDSDGRTPLDLAREHGNEEIVKLLEKQGG 160
Score = 83.6 bits (205), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 73/133 (54%)
Query: 984 NLRVREQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLL 1043
N + +TPLH A+ G+ +IV LLL GA ++ D T LH AA+ G +E+ +LL
Sbjct: 31 NASDSDGRTPLHYAAENGHKEIVKLLLSKGADPNAKDSDGRTPLHYAAENGHKEIVKLLL 90
Query: 1044 ENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQN 1103
GA + G TPLH + GH ++ KLLL K A + +G TPL +A + ++
Sbjct: 91 SKGADPNAKDSDGRTPLHYAAENGHKEIVKLLLSKGADPNTSDSDGRTPLDLAREHGNEE 150
Query: 1104 VALLLLEKGASMD 1116
+ LL ++G ++
Sbjct: 151 IVKLLEKQGGWLE 163
Score = 83.6 bits (205), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 76/171 (44%), Gaps = 26/171 (15%)
Query: 1113 ASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPL 1172
+ D LLE GA PNA G TPLH +A GH ++ +LL GAD + +G TPL
Sbjct: 15 GNKDRVKDLLENGADPNASDSDGRTPLHYAAENGHKEIVKLLLSKGADPNAKDSDGRTPL 74
Query: 1173 HLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKN 1232
H A+ + +LLL A + G TPLH A G + +LLL + A+
Sbjct: 75 HYAAENGHKEIVKLLLSKGADPNAKDSDGRTPLHYAAENGHKEIVKLLLSKGAD------ 128
Query: 1233 FPSRXXXXXXXXXXXXXXYTNTTD-QGFTPLHHSAQQGHSTIVALLLDRGA 1282
NT+D G TPL + + G+ IV LL +G
Sbjct: 129 -------------------PNTSDSDGRTPLDLAREHGNEEIVKLLEKQGG 160
Score = 78.6 bits (192), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 69/129 (53%), Gaps = 2/129 (1%)
Query: 186 DYLTALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGAS 245
D T LH AA GH + K LL K ADPNA+ +G TPLH A + ++V+LLL GA
Sbjct: 36 DGRTPLHYAAENGHKEIVKLLLSKGADPNAKDSDGRTPLHYAAENGHKEIVKLLLSKGAD 95
Query: 246 IEA-TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVEL 304
A ++ R P LH A + ++V+LLL GA + L +A + ++V+L
Sbjct: 96 PNAKDSDGRTP-LHYAAENGHKEIVKLLLSKGADPNTSDSDGRTPLDLAREHGNEEIVKL 154
Query: 305 LLKHGASIE 313
L K G +E
Sbjct: 155 LEKQGGWLE 163
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 81/155 (52%), Gaps = 4/155 (2%)
Query: 194 AAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEA-TTEV 252
AA G+ K LL+ ADPNA +G TPLH A + ++V+LLL GA A ++
Sbjct: 11 AAENGNKDRVKDLLENGADPNASDSDGRTPLHYAAENGHKEIVKLLLSKGADPNAKDSDG 70
Query: 253 REPMLHIACKKNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKVVELLLKHGAS 311
R P LH A + ++V+LLL GA A ++ R P LH A + ++V+LLL GA
Sbjct: 71 RTP-LHYAAENGHKEIVKLLLSKGADPNAKDSDGRTP-LHYAAENGHKEIVKLLLSKGAD 128
Query: 312 IEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 346
+ L +A + ++V+LL K G +E
Sbjct: 129 PNTSDSDGRTPLDLAREHGNEEIVKLLEKQGGWLE 163
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 74/134 (55%), Gaps = 20/134 (14%)
Query: 35 TPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGA-PIS 93
TPLH AA+ G +V LLLS+GA+ + K DG T LH AA +GH+ ++++LL +GA P +
Sbjct: 39 TPLHYAAENGHKEIVKLLLSKGADPNAKDSDGRTPLHYAAENGHKEIVKLLLSKGADPNA 98
Query: 94 SKTKVRG--FYILRSGHEAVIEMLLEQGAPISSKTKVAAVLLENGASLTSTTKKGFTPLH 151
+ R Y +GH+ ++++LL + GA ++ G TPL
Sbjct: 99 KDSDGRTPLHYAAENGHKEIVKLLLSK-----------------GADPNTSDSDGRTPLD 141
Query: 152 LTGKYGHIKVAKLL 165
L ++G+ ++ KLL
Sbjct: 142 LAREHGNEEIVKLL 155
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 90/211 (42%), Gaps = 61/211 (28%)
Query: 40 AAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGA-PISSKTKV 98
AA+ G + V LL GA+ + DG T LH AA +GH+ ++++LL +GA P + +
Sbjct: 11 AAENGNKDRVKDLLENGADPNASDSDGRTPLHYAAENGHKEIVKLLLSKGADPNAKDSDG 70
Query: 99 RG--FYILRSGHEAVIEMLLEQGAPISSKTKVAAVLLENGASLTSTTKKGFTPLHLTGKY 156
R Y +GH+ ++++LL +GA ++K G TPLH +
Sbjct: 71 RTPLHYAAENGHKEIVKLLLSKGADPNAK-----------------DSDGRTPLHYAAEN 113
Query: 157 GHIKVAKLLLQKDAPVDFQGKAPVDDVTVDYLTALHVAAHCGHARVAKTLLDKKADPNAR 216
GH ++ KLLL K A DPN
Sbjct: 114 GHKEIVKLLLSKGA-----------------------------------------DPNTS 132
Query: 217 ALNGFTPLHIACKKNRIKVVELLLKHGASIE 247
+G TPL +A + ++V+LL K G +E
Sbjct: 133 DSDGRTPLDLAREHGNEEIVKLLEKQGGWLE 163
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 84/165 (50%), Gaps = 5/165 (3%)
Query: 250 TEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG 309
+E+ + ++ A N+ +V +LL ++GA A+ LH A + ++V+LLL G
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLL-ENGADPNASDSDGRTPLHYAAENGHKEIVKLLLSKG 60
Query: 310 ASIEA-TTEVREPMLHIACKKNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKV 367
A A ++ R P LH A + ++V+LLL GA A ++ R P LH A + ++
Sbjct: 61 ADPNAKDSDGRTP-LHYAAENGHKEIVKLLLSKGADPNAKDSDGRTP-LHYAAENGHKEI 118
Query: 368 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 412
V+LLL GA + L +A + ++V+LL K G +E
Sbjct: 119 VKLLLSKGADPNTSDSDGRTPLDLAREHGNEEIVKLLEKQGGWLE 163
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 84/165 (50%), Gaps = 5/165 (3%)
Query: 283 TEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG 342
+E+ + ++ A N+ +V +LL ++GA A+ LH A + ++V+LLL G
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLL-ENGADPNASDSDGRTPLHYAAENGHKEIVKLLLSKG 60
Query: 343 ASIEA-TTEVREPMLHIACKKNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKV 400
A A ++ R P LH A + ++V+LLL GA A ++ R P LH A + ++
Sbjct: 61 ADPNAKDSDGRTP-LHYAAENGHKEIVKLLLSKGADPNAKDSDGRTP-LHYAAENGHKEI 118
Query: 401 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 445
V+LLL GA + L +A + ++V+LL K G +E
Sbjct: 119 VKLLLSKGADPNTSDSDGRTPLDLAREHGNEEIVKLLEKQGGWLE 163
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 84/165 (50%), Gaps = 5/165 (3%)
Query: 316 TEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG 375
+E+ + ++ A N+ +V +LL ++GA A+ LH A + ++V+LLL G
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLL-ENGADPNASDSDGRTPLHYAAENGHKEIVKLLLSKG 60
Query: 376 ASIEA-TTEVREPMLHIACKKNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKV 433
A A ++ R P LH A + ++V+LLL GA A ++ R P LH A + ++
Sbjct: 61 ADPNAKDSDGRTP-LHYAAENGHKEIVKLLLSKGADPNAKDSDGRTP-LHYAAENGHKEI 118
Query: 434 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 478
V+LLL GA + L +A + ++V+LL K G +E
Sbjct: 119 VKLLLSKGADPNTSDSDGRTPLDLAREHGNEEIVKLLEKQGGWLE 163
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 84/165 (50%), Gaps = 5/165 (3%)
Query: 349 TEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG 408
+E+ + ++ A N+ +V +LL ++GA A+ LH A + ++V+LLL G
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLL-ENGADPNASDSDGRTPLHYAAENGHKEIVKLLLSKG 60
Query: 409 ASIEA-TTEVREPMLHIACKKNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKV 466
A A ++ R P LH A + ++V+LLL GA A ++ R P LH A + ++
Sbjct: 61 ADPNAKDSDGRTP-LHYAAENGHKEIVKLLLSKGADPNAKDSDGRTP-LHYAAENGHKEI 118
Query: 467 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 511
V+LLL GA + L +A + ++V+LL K G +E
Sbjct: 119 VKLLLSKGADPNTSDSDGRTPLDLAREHGNEEIVKLLEKQGGWLE 163
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 84/165 (50%), Gaps = 5/165 (3%)
Query: 382 TEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG 441
+E+ + ++ A N+ +V +LL ++GA A+ LH A + ++V+LLL G
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLL-ENGADPNASDSDGRTPLHYAAENGHKEIVKLLLSKG 60
Query: 442 ASIEA-TTEVREPMLHIACKKNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKV 499
A A ++ R P LH A + ++V+LLL GA A ++ R P LH A + ++
Sbjct: 61 ADPNAKDSDGRTP-LHYAAENGHKEIVKLLLSKGADPNAKDSDGRTP-LHYAAENGHKEI 118
Query: 500 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 544
V+LLL GA + L +A + ++V+LL K G +E
Sbjct: 119 VKLLLSKGADPNTSDSDGRTPLDLAREHGNEEIVKLLEKQGGWLE 163
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 84/165 (50%), Gaps = 5/165 (3%)
Query: 415 TEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG 474
+E+ + ++ A N+ +V +LL ++GA A+ LH A + ++V+LLL G
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLL-ENGADPNASDSDGRTPLHYAAENGHKEIVKLLLSKG 60
Query: 475 ASIEA-TTEVREPMLHIACKKNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKV 532
A A ++ R P LH A + ++V+LLL GA A ++ R P LH A + ++
Sbjct: 61 ADPNAKDSDGRTP-LHYAAENGHKEIVKLLLSKGADPNAKDSDGRTP-LHYAAENGHKEI 118
Query: 533 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 577
V+LLL GA + L +A + ++V+LL K G +E
Sbjct: 119 VKLLLSKGADPNTSDSDGRTPLDLAREHGNEEIVKLLEKQGGWLE 163
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 84/165 (50%), Gaps = 5/165 (3%)
Query: 448 TEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG 507
+E+ + ++ A N+ +V +LL ++GA A+ LH A + ++V+LLL G
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLL-ENGADPNASDSDGRTPLHYAAENGHKEIVKLLLSKG 60
Query: 508 ASIEA-TTEVREPMLHIACKKNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKV 565
A A ++ R P LH A + ++V+LLL GA A ++ R P LH A + ++
Sbjct: 61 ADPNAKDSDGRTP-LHYAAENGHKEIVKLLLSKGADPNAKDSDGRTP-LHYAAENGHKEI 118
Query: 566 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 610
V+LLL GA + L +A + ++V+LL K G +E
Sbjct: 119 VKLLLSKGADPNTSDSDGRTPLDLAREHGNEEIVKLLEKQGGWLE 163
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 84/165 (50%), Gaps = 5/165 (3%)
Query: 481 TEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG 540
+E+ + ++ A N+ +V +LL ++GA A+ LH A + ++V+LLL G
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLL-ENGADPNASDSDGRTPLHYAAENGHKEIVKLLLSKG 60
Query: 541 ASIEA-TTEVREPMLHIACKKNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKV 598
A A ++ R P LH A + ++V+LLL GA A ++ R P LH A + ++
Sbjct: 61 ADPNAKDSDGRTP-LHYAAENGHKEIVKLLLSKGADPNAKDSDGRTP-LHYAAENGHKEI 118
Query: 599 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 643
V+LLL GA + L +A + ++V+LL K G +E
Sbjct: 119 VKLLLSKGADPNTSDSDGRTPLDLAREHGNEEIVKLLEKQGGWLE 163
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 84/165 (50%), Gaps = 5/165 (3%)
Query: 514 TEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG 573
+E+ + ++ A N+ +V +LL ++GA A+ LH A + ++V+LLL G
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLL-ENGADPNASDSDGRTPLHYAAENGHKEIVKLLLSKG 60
Query: 574 ASIEA-TTEVREPMLHIACKKNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKV 631
A A ++ R P LH A + ++V+LLL GA A ++ R P LH A + ++
Sbjct: 61 ADPNAKDSDGRTP-LHYAAENGHKEIVKLLLSKGADPNAKDSDGRTP-LHYAAENGHKEI 118
Query: 632 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 676
V+LLL GA + L +A + ++V+LL K G +E
Sbjct: 119 VKLLLSKGADPNTSDSDGRTPLDLAREHGNEEIVKLLEKQGGWLE 163
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 84/165 (50%), Gaps = 5/165 (3%)
Query: 547 TEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG 606
+E+ + ++ A N+ +V +LL ++GA A+ LH A + ++V+LLL G
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLL-ENGADPNASDSDGRTPLHYAAENGHKEIVKLLLSKG 60
Query: 607 ASIEA-TTEVREPMLHIACKKNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKV 664
A A ++ R P LH A + ++V+LLL GA A ++ R P LH A + ++
Sbjct: 61 ADPNAKDSDGRTP-LHYAAENGHKEIVKLLLSKGADPNAKDSDGRTP-LHYAAENGHKEI 118
Query: 665 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 709
V+LLL GA + L +A + ++V+LL K G +E
Sbjct: 119 VKLLLSKGADPNTSDSDGRTPLDLAREHGNEEIVKLLEKQGGWLE 163
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 84/165 (50%), Gaps = 5/165 (3%)
Query: 580 TEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG 639
+E+ + ++ A N+ +V +LL ++GA A+ LH A + ++V+LLL G
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLL-ENGADPNASDSDGRTPLHYAAENGHKEIVKLLLSKG 60
Query: 640 ASIEA-TTEVREPMLHIACKKNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKV 697
A A ++ R P LH A + ++V+LLL GA A ++ R P LH A + ++
Sbjct: 61 ADPNAKDSDGRTP-LHYAAENGHKEIVKLLLSKGADPNAKDSDGRTP-LHYAAENGHKEI 118
Query: 698 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 742
V+LLL GA + L +A + ++V+LL K G +E
Sbjct: 119 VKLLLSKGADPNTSDSDGRTPLDLAREHGNEEIVKLLEKQGGWLE 163
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 84/165 (50%), Gaps = 5/165 (3%)
Query: 613 TEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG 672
+E+ + ++ A N+ +V +LL ++GA A+ LH A + ++V+LLL G
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLL-ENGADPNASDSDGRTPLHYAAENGHKEIVKLLLSKG 60
Query: 673 ASIEA-TTEVREPMLHIACKKNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKV 730
A A ++ R P LH A + ++V+LLL GA A ++ R P LH A + ++
Sbjct: 61 ADPNAKDSDGRTP-LHYAAENGHKEIVKLLLSKGADPNAKDSDGRTP-LHYAAENGHKEI 118
Query: 731 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 775
V+LLL GA + L +A + ++V+LL K G +E
Sbjct: 119 VKLLLSKGADPNTSDSDGRTPLDLAREHGNEEIVKLLEKQGGWLE 163
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 84/165 (50%), Gaps = 5/165 (3%)
Query: 646 TEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG 705
+E+ + ++ A N+ +V +LL ++GA A+ LH A + ++V+LLL G
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLL-ENGADPNASDSDGRTPLHYAAENGHKEIVKLLLSKG 60
Query: 706 ASIEA-TTEVREPMLHIACKKNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKV 763
A A ++ R P LH A + ++V+LLL GA A ++ R P LH A + ++
Sbjct: 61 ADPNAKDSDGRTP-LHYAAENGHKEIVKLLLSKGADPNAKDSDGRTP-LHYAAENGHKEI 118
Query: 764 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 808
V+LLL GA + L +A + ++V+LL K G +E
Sbjct: 119 VKLLLSKGADPNTSDSDGRTPLDLAREHGNEEIVKLLEKQGGWLE 163
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 84/165 (50%), Gaps = 5/165 (3%)
Query: 679 TEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG 738
+E+ + ++ A N+ +V +LL ++GA A+ LH A + ++V+LLL G
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLL-ENGADPNASDSDGRTPLHYAAENGHKEIVKLLLSKG 60
Query: 739 ASIEA-TTEVREPMLHIACKKNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKV 796
A A ++ R P LH A + ++V+LLL GA A ++ R P LH A + ++
Sbjct: 61 ADPNAKDSDGRTP-LHYAAENGHKEIVKLLLSKGADPNAKDSDGRTP-LHYAAENGHKEI 118
Query: 797 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 841
V+LLL GA + L +A + ++V+LL K G +E
Sbjct: 119 VKLLLSKGADPNTSDSDGRTPLDLAREHGNEEIVKLLEKQGGWLE 163
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 84/165 (50%), Gaps = 5/165 (3%)
Query: 712 TEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG 771
+E+ + ++ A N+ +V +LL ++GA A+ LH A + ++V+LLL G
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLL-ENGADPNASDSDGRTPLHYAAENGHKEIVKLLLSKG 60
Query: 772 ASIEA-TTEVREPMLHIACKKNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKV 829
A A ++ R P LH A + ++V+LLL GA A ++ R P LH A + ++
Sbjct: 61 ADPNAKDSDGRTP-LHYAAENGHKEIVKLLLSKGADPNAKDSDGRTP-LHYAAENGHKEI 118
Query: 830 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 874
V+LLL GA + L +A + ++V+LL K G +E
Sbjct: 119 VKLLLSKGADPNTSDSDGRTPLDLAREHGNEEIVKLLEKQGGWLE 163
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 84/165 (50%), Gaps = 5/165 (3%)
Query: 745 TEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG 804
+E+ + ++ A N+ +V +LL ++GA A+ LH A + ++V+LLL G
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLL-ENGADPNASDSDGRTPLHYAAENGHKEIVKLLLSKG 60
Query: 805 ASIEA-TTEVREPMLHIACKKNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKV 862
A A ++ R P LH A + ++V+LLL GA A ++ R P LH A + ++
Sbjct: 61 ADPNAKDSDGRTP-LHYAAENGHKEIVKLLLSKGADPNAKDSDGRTP-LHYAAENGHKEI 118
Query: 863 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 907
V+LLL GA + L +A + ++V+LL K G +E
Sbjct: 119 VKLLLSKGADPNTSDSDGRTPLDLAREHGNEEIVKLLEKQGGWLE 163
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 82/162 (50%), Gaps = 5/162 (3%)
Query: 778 TEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG 837
+E+ + ++ A N+ +V +LL ++GA A+ LH A + ++V+LLL G
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLL-ENGADPNASDSDGRTPLHYAAENGHKEIVKLLLSKG 60
Query: 838 ASIEA-TTEVREPMLHIACKKNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKV 895
A A ++ R P LH A + ++V+LLL GA A ++ R P LH A + ++
Sbjct: 61 ADPNAKDSDGRTP-LHYAAENGHKEIVKLLLSKGADPNAKDSDGRTP-LHYAAENGHKEI 118
Query: 896 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 937
V+LLL GA + L +A + ++V+LL K G
Sbjct: 119 VKLLLSKGADPNTSDSDGRTPLDLAREHGNEEIVKLLEKQGG 160
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 89/207 (42%), Gaps = 47/207 (22%)
Query: 844 TEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG 903
+E+ + ++ A N+ +V +LL ++GA A+ LH A + ++V+LLL G
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLL-ENGADPNASDSDGRTPLHYAAENGHKEIVKLLLSKG 60
Query: 904 ASIEA-TTEVREPMLHIACKKNRIKVVELLLKHGASSHVVSCYSNVKVHVSLNKIQDVSS 962
A A ++ R P LH A + ++V+LLL GA
Sbjct: 61 ADPNAKDSDGRTP-LHYAAENGHKEIVKLLLSKGADP----------------------- 96
Query: 963 SILRLATCDVLPQCETRLNFSNLRVREQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKD 1022
N + + +TPLH A+ G+ +IV LLL GA +++ D
Sbjct: 97 ---------------------NAKDSDGRTPLHYAAENGHKEIVKLLLSKGADPNTSDSD 135
Query: 1023 LYTALHIAAKEGQEEVAAVLLENGASL 1049
T L +A + G EE+ +L + G L
Sbjct: 136 GRTPLDLAREHGNEEIVKLLEKQGGWL 162
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 35/56 (62%)
Query: 35 TPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGA 90
TPLH AA+ G +V LLLS+GA+ + DG T L A G+E ++++L +QG
Sbjct: 105 TPLHYAAENGHKEIVKLLLSKGADPNTSDSDGRTPLDLAREHGNEEIVKLLEKQGG 160
>pdb|2BKK|B Chain B, Crystal Structure Of Aminoglycoside Phosphotransferase Aph
(3')-Iiia In Complex With The Inhibitor Ar_3a
pdb|2BKK|D Chain D, Crystal Structure Of Aminoglycoside Phosphotransferase Aph
(3')-Iiia In Complex With The Inhibitor Ar_3a
Length = 169
Score = 107 bits (268), Expect = 4e-23, Method: Composition-based stats.
Identities = 62/170 (36%), Positives = 95/170 (55%), Gaps = 13/170 (7%)
Query: 1022 DLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAP 1081
DL L AA+ GQ++ +L+ NGA + + G TPLHL GH+++ ++LL+ A
Sbjct: 13 DLGKKLLEAARAGQDDEVRILMANGADVNANDWFGITPLHLVVNNGHLEIIEVLLKYAAD 72
Query: 1082 VDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHL 1141
V+ K+G TPLH+A++ H ++I LL+YGA NA G+TPLHL
Sbjct: 73 VNASDKSGWTPLHLAAYRGH-------------LEIVEVLLKYGADVNAMDYQGYTPLHL 119
Query: 1142 SASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNN 1191
+A +GH ++ +LL++GADV+ K G T + +AE+L K N
Sbjct: 120 AAEDGHLEIVEVLLKYGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169
Score = 92.4 bits (228), Expect = 1e-18, Method: Composition-based stats.
Identities = 52/128 (40%), Positives = 75/128 (58%), Gaps = 2/128 (1%)
Query: 1262 LHHSAQQGHSTIVALLLDRGASPNATNK-GFTPLHHSAQQGHSTIVALLLDRGASPNATN 1320
L +A+ G V +L+ GA NA + G TPLH GH I+ +LL A NA++
Sbjct: 18 LLEAARAGQDDEVRILMANGADVNANDWFGITPLHLVVNNGHLEIIEVLLKYAADVNASD 77
Query: 1321 KTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRG 1380
K+ G+TPLH+A + G + + +LL A+V+ QG+TPLH +A+ GH IV +LL G
Sbjct: 78 KS-GWTPLHLAAYRGHLEIVEVLLKYGADVNAMDYQGYTPLHLAAEDGHLEIVEVLLKYG 136
Query: 1381 ASPNATNK 1388
A NA +K
Sbjct: 137 ADVNAQDK 144
Score = 89.0 bits (219), Expect = 2e-17, Method: Composition-based stats.
Identities = 52/158 (32%), Positives = 83/158 (52%), Gaps = 13/158 (8%)
Query: 997 ASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKG 1056
A+R G D V +L+ +GA V++ T LH+ G E+ VLL+ A + ++ K G
Sbjct: 21 AARAGQDDEVRILMANGADVNANDWFGITPLHLVVNNGHLEIIEVLLKYAADVNASDKSG 80
Query: 1057 FTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMD 1116
+TPLHL GH+++ ++LL+ A V+ G TPLH+A+ H ++
Sbjct: 81 WTPLHLAAYRGHLEIVEVLLKYGADVNAMDYQGYTPLHLAAEDGH-------------LE 127
Query: 1117 IATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAML 1154
I LL+YGA NA+ G T +S G+ D++ +L
Sbjct: 128 IVEVLLKYGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 88.2 bits (217), Expect = 3e-17, Method: Composition-based stats.
Identities = 52/157 (33%), Positives = 81/157 (51%), Gaps = 13/157 (8%)
Query: 1064 GKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLE 1123
+ G ++L+ A V+ G+TPLH+ + H ++I LL+
Sbjct: 22 ARAGQDDEVRILMANGADVNANDWFGITPLHLVVNNGH-------------LEIIEVLLK 68
Query: 1124 YGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGV 1183
Y A NA +G+TPLHL+A GH ++ +LL++GADV+ G TPLHL A++ + +
Sbjct: 69 YAADVNASDKSGWTPLHLAAYRGHLEIVEVLLKYGADVNAMDYQGYTPLHLAAEDGHLEI 128
Query: 1184 AELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLL 1220
E+LLK A V+ K G T I+ G +A +L
Sbjct: 129 VEVLLKYGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 87.0 bits (214), Expect = 6e-17, Method: Composition-based stats.
Identities = 47/128 (36%), Positives = 69/128 (53%)
Query: 1106 LLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAA 1165
LL + D L+ GA NA G TPLHL + GH ++ +LL++ ADV+ +
Sbjct: 18 LLEAARAGQDDEVRILMANGADVNANDWFGITPLHLVVNNGHLEIIEVLLKYAADVNASD 77
Query: 1166 KNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSA 1225
K+G TPLHL A + + E+LLK A V+ +G+TPLH+A G + + +LL A
Sbjct: 78 KSGWTPLHLAAYRGHLEIVEVLLKYGADVNAMDYQGYTPLHLAAEDGHLEIVEVLLKYGA 137
Query: 1226 NVTVPKNF 1233
+V F
Sbjct: 138 DVNAQDKF 145
Score = 85.1 bits (209), Expect = 2e-16, Method: Composition-based stats.
Identities = 57/170 (33%), Positives = 82/170 (48%), Gaps = 27/170 (15%)
Query: 1142 SASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKG 1201
+A G D +L+ +GADV+ G+TPLHL + + E+LLK A V+ K G
Sbjct: 21 AARAGQDDEVRILMANGADVNANDWFGITPLHLVVNNGHLEIIEVLLKYAADVNASDKSG 80
Query: 1202 FTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRXXXXXXXXXXXXXXYTNTTD-QGFT 1260
+TPLH+A + G + + +LL A+V N D QG+T
Sbjct: 81 WTPLHLAAYRGHLEIVEVLLKYGADV-------------------------NAMDYQGYT 115
Query: 1261 PLHHSAQQGHSTIVALLLDRGASPNATNK-GFTPLHHSAQQGHSTIVALL 1309
PLH +A+ GH IV +LL GA NA +K G T S G+ + +L
Sbjct: 116 PLHLAAEDGHLEIVEVLLKYGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 83.6 bits (205), Expect = 8e-16, Method: Composition-based stats.
Identities = 41/117 (35%), Positives = 75/117 (64%)
Query: 992 TPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTS 1051
TPLH+ G+++I+ +LL++ A V+++ K +T LH+AA G E+ VLL+ GA + +
Sbjct: 49 TPLHLVVNNGHLEIIEVLLKYAADVNASDKSGWTPLHLAAYRGHLEIVEVLLKYGADVNA 108
Query: 1052 TTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLL 1108
+G+TPLHL + GH+++ ++LL+ A V+ Q K G T ++ ++++A +L
Sbjct: 109 MDYQGYTPLHLAAEDGHLEIVEVLLKYGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 82.8 bits (203), Expect = 1e-15, Method: Composition-based stats.
Identities = 45/147 (30%), Positives = 78/147 (53%)
Query: 194 AAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVR 253
AA G + L+ AD NA G TPLH+ ++++E+LLK+ A + A+ +
Sbjct: 21 AARAGQDDEVRILMANGADVNANDWFGITPLHLVVNNGHLEIIEVLLKYAADVNASDKSG 80
Query: 254 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 313
LH+A + +++VE+LLK+GA + A LH+A + +++VE+LLK+GA +
Sbjct: 81 WTPLHLAAYRGHLEIVEVLLKYGADVNAMDYQGYTPLHLAAEDGHLEIVEVLLKYGADVN 140
Query: 314 ATTEVREPMLHIACKKNRIKVVELLLK 340
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 79.0 bits (193), Expect = 2e-14, Method: Composition-based stats.
Identities = 46/120 (38%), Positives = 66/120 (55%), Gaps = 2/120 (1%)
Query: 1258 GFTPLHHSAQQGHSTIVALLLDRGASPNATNK-GFTPLHHSAQQGHSTIVALLLDRGASP 1316
G TPLH GH I+ +LL A NA++K G+TPLH +A +GH IV +LL GA
Sbjct: 47 GITPLHLVVNNGHLEIIEVLLKYAADVNASDKSGWTPLHLAAYRGHLEIVEVLLKYGADV 106
Query: 1317 NATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALL 1376
NA + +G+TPLH+A G + + +LL A+V+ G T S G+ + +L
Sbjct: 107 NAMD-YQGYTPLHLAAEDGHLEIVEVLLKYGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 77.0 bits (188), Expect = 6e-14, Method: Composition-based stats.
Identities = 40/120 (33%), Positives = 68/120 (56%)
Query: 188 LTALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIE 247
+T LH+ + GH + + LL AD NA +G+TPLH+A + +++VE+LLK+GA +
Sbjct: 48 ITPLHLVVNNGHLEIIEVLLKYAADVNASDKSGWTPLHLAAYRGHLEIVEVLLKYGADVN 107
Query: 248 ATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 307
A LH+A + +++VE+LLK+GA + A + + I+ + E+L K
Sbjct: 108 AMDYQGYTPLHLAAEDGHLEIVEVLLKYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 72.0 bits (175), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 74/138 (53%)
Query: 236 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 295
V +L+ +GA + A LH+ ++++E+LLK+ A + A+ + LH+A
Sbjct: 30 VRILMANGADVNANDWFGITPLHLVVNNGHLEIIEVLLKYAADVNASDKSGWTPLHLAAY 89
Query: 296 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 355
+ +++VE+LLK+GA + A LH+A + +++VE+LLK+GA + A + +
Sbjct: 90 RGHLEIVEVLLKYGADVNAMDYQGYTPLHLAAEDGHLEIVEVLLKYGADVNAQDKFGKTA 149
Query: 356 LHIACKKNRIKVVELLLK 373
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 72.0 bits (175), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 74/138 (53%)
Query: 269 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 328
V +L+ +GA + A LH+ ++++E+LLK+ A + A+ + LH+A
Sbjct: 30 VRILMANGADVNANDWFGITPLHLVVNNGHLEIIEVLLKYAADVNASDKSGWTPLHLAAY 89
Query: 329 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 388
+ +++VE+LLK+GA + A LH+A + +++VE+LLK+GA + A + +
Sbjct: 90 RGHLEIVEVLLKYGADVNAMDYQGYTPLHLAAEDGHLEIVEVLLKYGADVNAQDKFGKTA 149
Query: 389 LHIACKKNRIKVVELLLK 406
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 72.0 bits (175), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 74/138 (53%)
Query: 302 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 361
V +L+ +GA + A LH+ ++++E+LLK+ A + A+ + LH+A
Sbjct: 30 VRILMANGADVNANDWFGITPLHLVVNNGHLEIIEVLLKYAADVNASDKSGWTPLHLAAY 89
Query: 362 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 421
+ +++VE+LLK+GA + A LH+A + +++VE+LLK+GA + A + +
Sbjct: 90 RGHLEIVEVLLKYGADVNAMDYQGYTPLHLAAEDGHLEIVEVLLKYGADVNAQDKFGKTA 149
Query: 422 LHIACKKNRIKVVELLLK 439
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 72.0 bits (175), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 74/138 (53%)
Query: 335 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 394
V +L+ +GA + A LH+ ++++E+LLK+ A + A+ + LH+A
Sbjct: 30 VRILMANGADVNANDWFGITPLHLVVNNGHLEIIEVLLKYAADVNASDKSGWTPLHLAAY 89
Query: 395 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 454
+ +++VE+LLK+GA + A LH+A + +++VE+LLK+GA + A + +
Sbjct: 90 RGHLEIVEVLLKYGADVNAMDYQGYTPLHLAAEDGHLEIVEVLLKYGADVNAQDKFGKTA 149
Query: 455 LHIACKKNRIKVVELLLK 472
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 72.0 bits (175), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 74/138 (53%)
Query: 368 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 427
V +L+ +GA + A LH+ ++++E+LLK+ A + A+ + LH+A
Sbjct: 30 VRILMANGADVNANDWFGITPLHLVVNNGHLEIIEVLLKYAADVNASDKSGWTPLHLAAY 89
Query: 428 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 487
+ +++VE+LLK+GA + A LH+A + +++VE+LLK+GA + A + +
Sbjct: 90 RGHLEIVEVLLKYGADVNAMDYQGYTPLHLAAEDGHLEIVEVLLKYGADVNAQDKFGKTA 149
Query: 488 LHIACKKNRIKVVELLLK 505
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 72.0 bits (175), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 74/138 (53%)
Query: 401 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 460
V +L+ +GA + A LH+ ++++E+LLK+ A + A+ + LH+A
Sbjct: 30 VRILMANGADVNANDWFGITPLHLVVNNGHLEIIEVLLKYAADVNASDKSGWTPLHLAAY 89
Query: 461 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 520
+ +++VE+LLK+GA + A LH+A + +++VE+LLK+GA + A + +
Sbjct: 90 RGHLEIVEVLLKYGADVNAMDYQGYTPLHLAAEDGHLEIVEVLLKYGADVNAQDKFGKTA 149
Query: 521 LHIACKKNRIKVVELLLK 538
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 72.0 bits (175), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 74/138 (53%)
Query: 434 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 493
V +L+ +GA + A LH+ ++++E+LLK+ A + A+ + LH+A
Sbjct: 30 VRILMANGADVNANDWFGITPLHLVVNNGHLEIIEVLLKYAADVNASDKSGWTPLHLAAY 89
Query: 494 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 553
+ +++VE+LLK+GA + A LH+A + +++VE+LLK+GA + A + +
Sbjct: 90 RGHLEIVEVLLKYGADVNAMDYQGYTPLHLAAEDGHLEIVEVLLKYGADVNAQDKFGKTA 149
Query: 554 LHIACKKNRIKVVELLLK 571
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 72.0 bits (175), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 74/138 (53%)
Query: 467 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 526
V +L+ +GA + A LH+ ++++E+LLK+ A + A+ + LH+A
Sbjct: 30 VRILMANGADVNANDWFGITPLHLVVNNGHLEIIEVLLKYAADVNASDKSGWTPLHLAAY 89
Query: 527 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 586
+ +++VE+LLK+GA + A LH+A + +++VE+LLK+GA + A + +
Sbjct: 90 RGHLEIVEVLLKYGADVNAMDYQGYTPLHLAAEDGHLEIVEVLLKYGADVNAQDKFGKTA 149
Query: 587 LHIACKKNRIKVVELLLK 604
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 72.0 bits (175), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 74/138 (53%)
Query: 500 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 559
V +L+ +GA + A LH+ ++++E+LLK+ A + A+ + LH+A
Sbjct: 30 VRILMANGADVNANDWFGITPLHLVVNNGHLEIIEVLLKYAADVNASDKSGWTPLHLAAY 89
Query: 560 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 619
+ +++VE+LLK+GA + A LH+A + +++VE+LLK+GA + A + +
Sbjct: 90 RGHLEIVEVLLKYGADVNAMDYQGYTPLHLAAEDGHLEIVEVLLKYGADVNAQDKFGKTA 149
Query: 620 LHIACKKNRIKVVELLLK 637
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 72.0 bits (175), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 74/138 (53%)
Query: 533 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 592
V +L+ +GA + A LH+ ++++E+LLK+ A + A+ + LH+A
Sbjct: 30 VRILMANGADVNANDWFGITPLHLVVNNGHLEIIEVLLKYAADVNASDKSGWTPLHLAAY 89
Query: 593 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 652
+ +++VE+LLK+GA + A LH+A + +++VE+LLK+GA + A + +
Sbjct: 90 RGHLEIVEVLLKYGADVNAMDYQGYTPLHLAAEDGHLEIVEVLLKYGADVNAQDKFGKTA 149
Query: 653 LHIACKKNRIKVVELLLK 670
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 72.0 bits (175), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 74/138 (53%)
Query: 566 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 625
V +L+ +GA + A LH+ ++++E+LLK+ A + A+ + LH+A
Sbjct: 30 VRILMANGADVNANDWFGITPLHLVVNNGHLEIIEVLLKYAADVNASDKSGWTPLHLAAY 89
Query: 626 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 685
+ +++VE+LLK+GA + A LH+A + +++VE+LLK+GA + A + +
Sbjct: 90 RGHLEIVEVLLKYGADVNAMDYQGYTPLHLAAEDGHLEIVEVLLKYGADVNAQDKFGKTA 149
Query: 686 LHIACKKNRIKVVELLLK 703
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 72.0 bits (175), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 74/138 (53%)
Query: 599 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 658
V +L+ +GA + A LH+ ++++E+LLK+ A + A+ + LH+A
Sbjct: 30 VRILMANGADVNANDWFGITPLHLVVNNGHLEIIEVLLKYAADVNASDKSGWTPLHLAAY 89
Query: 659 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 718
+ +++VE+LLK+GA + A LH+A + +++VE+LLK+GA + A + +
Sbjct: 90 RGHLEIVEVLLKYGADVNAMDYQGYTPLHLAAEDGHLEIVEVLLKYGADVNAQDKFGKTA 149
Query: 719 LHIACKKNRIKVVELLLK 736
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 72.0 bits (175), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 74/138 (53%)
Query: 632 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 691
V +L+ +GA + A LH+ ++++E+LLK+ A + A+ + LH+A
Sbjct: 30 VRILMANGADVNANDWFGITPLHLVVNNGHLEIIEVLLKYAADVNASDKSGWTPLHLAAY 89
Query: 692 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 751
+ +++VE+LLK+GA + A LH+A + +++VE+LLK+GA + A + +
Sbjct: 90 RGHLEIVEVLLKYGADVNAMDYQGYTPLHLAAEDGHLEIVEVLLKYGADVNAQDKFGKTA 149
Query: 752 LHIACKKNRIKVVELLLK 769
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 72.0 bits (175), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 74/138 (53%)
Query: 665 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 724
V +L+ +GA + A LH+ ++++E+LLK+ A + A+ + LH+A
Sbjct: 30 VRILMANGADVNANDWFGITPLHLVVNNGHLEIIEVLLKYAADVNASDKSGWTPLHLAAY 89
Query: 725 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 784
+ +++VE+LLK+GA + A LH+A + +++VE+LLK+GA + A + +
Sbjct: 90 RGHLEIVEVLLKYGADVNAMDYQGYTPLHLAAEDGHLEIVEVLLKYGADVNAQDKFGKTA 149
Query: 785 LHIACKKNRIKVVELLLK 802
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 72.0 bits (175), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 74/138 (53%)
Query: 698 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 757
V +L+ +GA + A LH+ ++++E+LLK+ A + A+ + LH+A
Sbjct: 30 VRILMANGADVNANDWFGITPLHLVVNNGHLEIIEVLLKYAADVNASDKSGWTPLHLAAY 89
Query: 758 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 817
+ +++VE+LLK+GA + A LH+A + +++VE+LLK+GA + A + +
Sbjct: 90 RGHLEIVEVLLKYGADVNAMDYQGYTPLHLAAEDGHLEIVEVLLKYGADVNAQDKFGKTA 149
Query: 818 LHIACKKNRIKVVELLLK 835
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 72.0 bits (175), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 74/138 (53%)
Query: 731 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 790
V +L+ +GA + A LH+ ++++E+LLK+ A + A+ + LH+A
Sbjct: 30 VRILMANGADVNANDWFGITPLHLVVNNGHLEIIEVLLKYAADVNASDKSGWTPLHLAAY 89
Query: 791 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 850
+ +++VE+LLK+GA + A LH+A + +++VE+LLK+GA + A + +
Sbjct: 90 RGHLEIVEVLLKYGADVNAMDYQGYTPLHLAAEDGHLEIVEVLLKYGADVNAQDKFGKTA 149
Query: 851 LHIACKKNRIKVVELLLK 868
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 72.0 bits (175), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 74/138 (53%)
Query: 764 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 823
V +L+ +GA + A LH+ ++++E+LLK+ A + A+ + LH+A
Sbjct: 30 VRILMANGADVNANDWFGITPLHLVVNNGHLEIIEVLLKYAADVNASDKSGWTPLHLAAY 89
Query: 824 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 883
+ +++VE+LLK+GA + A LH+A + +++VE+LLK+GA + A + +
Sbjct: 90 RGHLEIVEVLLKYGADVNAMDYQGYTPLHLAAEDGHLEIVEVLLKYGADVNAQDKFGKTA 149
Query: 884 LHIACKKNRIKVVELLLK 901
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 72.0 bits (175), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 74/138 (53%)
Query: 797 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 856
V +L+ +GA + A LH+ ++++E+LLK+ A + A+ + LH+A
Sbjct: 30 VRILMANGADVNANDWFGITPLHLVVNNGHLEIIEVLLKYAADVNASDKSGWTPLHLAAY 89
Query: 857 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 916
+ +++VE+LLK+GA + A LH+A + +++VE+LLK+GA + A + +
Sbjct: 90 RGHLEIVEVLLKYGADVNAMDYQGYTPLHLAAEDGHLEIVEVLLKYGADVNAQDKFGKTA 149
Query: 917 LHIACKKNRIKVVELLLK 934
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 68.9 bits (167), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/137 (27%), Positives = 74/137 (54%)
Query: 830 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 889
V +L+ +GA + A LH+ ++++E+LLK+ A + A+ + LH+A
Sbjct: 30 VRILMANGADVNANDWFGITPLHLVVNNGHLEIIEVLLKYAADVNASDKSGWTPLHLAAY 89
Query: 890 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASSHVVSCYSNVK 949
+ +++VE+LLK+GA + A LH+A + +++VE+LLK+GA + +
Sbjct: 90 RGHLEIVEVLLKYGADVNAMDYQGYTPLHLAAEDGHLEIVEVLLKYGADVNAQDKFGKTA 149
Query: 950 VHVSLNKIQDVSSSILR 966
+S++ + + IL+
Sbjct: 150 FDISIDNGNEDLAEILQ 166
Score = 68.2 bits (165), Expect = 3e-11, Method: Composition-based stats.
Identities = 46/149 (30%), Positives = 81/149 (54%), Gaps = 16/149 (10%)
Query: 40 AAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISSKTKVR 99
AA+ G+ + V +L++ GA+++ G+T LH +GH +IE+LL+ A +++ K
Sbjct: 21 AARAGQDDEVRILMANGADVNANDWFGITPLHLVVNNGHLEIIEVLLKYAADVNASDK-S 79
Query: 100 GFYILRSGHEAVIEMLLEQGAPISSKTKVAAVLLENGASLTSTTKKGFTPLHLTGKYGHI 159
G+ L H A LE + VLL+ GA + + +G+TPLHL + GH+
Sbjct: 80 GWTPL---HLAAYRGHLE----------IVEVLLKYGADVNAMDYQGYTPLHLAAEDGHL 126
Query: 160 KVAKLLLQKDAPVDFQGK--APVDDVTVD 186
++ ++LL+ A V+ Q K D+++D
Sbjct: 127 EIVEVLLKYGADVNAQDKFGKTAFDISID 155
Score = 59.7 bits (143), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 57/98 (58%), Gaps = 5/98 (5%)
Query: 34 ITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPIS 93
ITPLH+ G ++ +LL A+++ + G T LH AA GH ++E+LL+ GA ++
Sbjct: 48 ITPLHLVVNNGHLEIIEVLLKYAADVNASDKSGWTPLHLAAYRGHLEIVEVLLKYGADVN 107
Query: 94 SKTKVRGFYIL----RSGHEAVIEMLLEQGAPISSKTK 127
+ +G+ L GH ++E+LL+ GA ++++ K
Sbjct: 108 A-MDYQGYTPLHLAAEDGHLEIVEVLLKYGADVNAQDK 144
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 35 TPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISS 94
TPLH+AA G +V +LL GA+++ G T LH AA GH ++E+LL+ GA +++
Sbjct: 82 TPLHLAAYRGHLEIVEVLLKYGADVNAMDYQGYTPLHLAAEDGHLEIVEVLLKYGADVNA 141
Query: 95 KTKV--RGFYI-LRSGHEAVIEML 115
+ K F I + +G+E + E+L
Sbjct: 142 QDKFGKTAFDISIDNGNEDLAEIL 165
>pdb|2P2C|P Chain P, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat Protein
(Darpin)
pdb|2P2C|Q Chain Q, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat Protein
(Darpin)
pdb|2P2C|R Chain R, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat Protein
(Darpin)
pdb|2P2C|S Chain S, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat Protein
(Darpin)
pdb|2P2C|T Chain T, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat Protein
(Darpin)
pdb|2P2C|U Chain U, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat Protein
(Darpin)
Length = 169
Score = 107 bits (267), Expect = 5e-23, Method: Composition-based stats.
Identities = 63/170 (37%), Positives = 95/170 (55%), Gaps = 13/170 (7%)
Query: 1022 DLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAP 1081
DL L AA+ GQ++ +L+ NGA + +T G TPLHL K GH+++ ++LL+ A
Sbjct: 13 DLGKKLLEAARAGQDDEVRILMANGADVNATDWLGHTPLHLAAKTGHLEIVEVLLKYGAD 72
Query: 1082 VDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHL 1141
V+ G TPLH+A+ H ++I LL++GA NA+ GFTPLHL
Sbjct: 73 VNAWDNYGATPLHLAADNGH-------------LEIVEVLLKHGADVNAKDYEGFTPLHL 119
Query: 1142 SASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNN 1191
+A +GH ++ +LL++GADV+ K G T + +AE+L K N
Sbjct: 120 AAYDGHLEIVEVLLKYGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169
Score = 95.1 bits (235), Expect = 3e-19, Method: Composition-based stats.
Identities = 56/158 (35%), Positives = 88/158 (55%), Gaps = 13/158 (8%)
Query: 997 ASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKG 1056
A+R G D V +L+ +GA V++T +T LH+AAK G E+ VLL+ GA + + G
Sbjct: 21 AARAGQDDEVRILMANGADVNATDWLGHTPLHLAAKTGHLEIVEVLLKYGADVNAWDNYG 80
Query: 1057 FTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMD 1116
TPLHL GH+++ ++LL+ A V+ + G TPLH+A++ H ++
Sbjct: 81 ATPLHLAADNGHLEIVEVLLKHGADVNAKDYEGFTPLHLAAYDGH-------------LE 127
Query: 1117 IATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAML 1154
I LL+YGA NA+ G T +S G+ D++ +L
Sbjct: 128 IVEVLLKYGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 90.1 bits (222), Expect = 7e-18, Method: Composition-based stats.
Identities = 55/128 (42%), Positives = 74/128 (57%), Gaps = 2/128 (1%)
Query: 1262 LHHSAQQGHSTIVALLLDRGASPNATN-KGFTPLHHSAQQGHSTIVALLLDRGASPNATN 1320
L +A+ G V +L+ GA NAT+ G TPLH +A+ GH IV +LL GA NA +
Sbjct: 18 LLEAARAGQDDEVRILMANGADVNATDWLGHTPLHLAAKTGHLEIVEVLLKYGADVNAWD 77
Query: 1321 KTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRG 1380
G TPLH+A G + + +LL A+V+ +GFTPLH +A GH IV +LL G
Sbjct: 78 -NYGATPLHLAADNGHLEIVEVLLKHGADVNAKDYEGFTPLHLAAYDGHLEIVEVLLKYG 136
Query: 1381 ASPNATNK 1388
A NA +K
Sbjct: 137 ADVNAQDK 144
Score = 89.7 bits (221), Expect = 1e-17, Method: Composition-based stats.
Identities = 49/128 (38%), Positives = 70/128 (54%)
Query: 1106 LLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAA 1165
LL + D L+ GA NA G TPLHL+A GH ++ +LL++GADV+
Sbjct: 18 LLEAARAGQDDEVRILMANGADVNATDWLGHTPLHLAAKTGHLEIVEVLLKYGADVNAWD 77
Query: 1166 KNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSA 1225
G TPLHL A + + E+LLK+ A V+ +GFTPLH+A + G + + +LL A
Sbjct: 78 NYGATPLHLAADNGHLEIVEVLLKHGADVNAKDYEGFTPLHLAAYDGHLEIVEVLLKYGA 137
Query: 1226 NVTVPKNF 1233
+V F
Sbjct: 138 DVNAQDKF 145
Score = 85.9 bits (211), Expect = 1e-16, Method: Composition-based stats.
Identities = 50/147 (34%), Positives = 77/147 (52%)
Query: 194 AAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVR 253
AA G + L+ AD NA G TPLH+A K +++VE+LLK+GA + A
Sbjct: 21 AARAGQDDEVRILMANGADVNATDWLGHTPLHLAAKTGHLEIVEVLLKYGADVNAWDNYG 80
Query: 254 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 313
LH+A +++VE+LLKHGA + A LH+A +++VE+LLK+GA +
Sbjct: 81 ATPLHLAADNGHLEIVEVLLKHGADVNAKDYEGFTPLHLAAYDGHLEIVEVLLKYGADVN 140
Query: 314 ATTEVREPMLHIACKKNRIKVVELLLK 340
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 85.1 bits (209), Expect = 3e-16, Method: Composition-based stats.
Identities = 44/118 (37%), Positives = 76/118 (64%)
Query: 991 QTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLT 1050
TPLH+A++ G+++IV +LL++GA V++ T LH+AA G E+ VLL++GA +
Sbjct: 48 HTPLHLAAKTGHLEIVEVLLKYGADVNAWDNYGATPLHLAADNGHLEIVEVLLKHGADVN 107
Query: 1051 STTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLL 1108
+ +GFTPLHL GH+++ ++LL+ A V+ Q K G T ++ ++++A +L
Sbjct: 108 AKDYEGFTPLHLAAYDGHLEIVEVLLKYGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 83.2 bits (204), Expect = 9e-16, Method: Composition-based stats.
Identities = 53/126 (42%), Positives = 69/126 (54%), Gaps = 3/126 (2%)
Query: 1253 NTTDQ-GFTPLHHSAQQGHSTIVALLLDRGASPNA-TNKGFTPLHHSAQQGHSTIVALLL 1310
N TD G TPLH +A+ GH IV +LL GA NA N G TPLH +A GH IV +LL
Sbjct: 41 NATDWLGHTPLHLAAKTGHLEIVEVLLKYGADVNAWDNYGATPLHLAADNGHLEIVEVLL 100
Query: 1311 DRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHS 1370
GA NA + GFTPLH+A + G + + +LL A+V+ G T S G+
Sbjct: 101 KHGADVNAKD-YEGFTPLHLAAYDGHLEIVEVLLKYGADVNAQDKFGKTAFDISIDNGNE 159
Query: 1371 TIVALL 1376
+ +L
Sbjct: 160 DLAEIL 165
Score = 80.1 bits (196), Expect = 8e-15, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 75/138 (54%)
Query: 236 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 295
V +L+ +GA + AT + LH+A K +++VE+LLK+GA + A LH+A
Sbjct: 30 VRILMANGADVNATDWLGHTPLHLAAKTGHLEIVEVLLKYGADVNAWDNYGATPLHLAAD 89
Query: 296 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 355
+++VE+LLKHGA + A LH+A +++VE+LLK+GA + A + +
Sbjct: 90 NGHLEIVEVLLKHGADVNAKDYEGFTPLHLAAYDGHLEIVEVLLKYGADVNAQDKFGKTA 149
Query: 356 LHIACKKNRIKVVELLLK 373
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 80.1 bits (196), Expect = 8e-15, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 75/138 (54%)
Query: 269 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 328
V +L+ +GA + AT + LH+A K +++VE+LLK+GA + A LH+A
Sbjct: 30 VRILMANGADVNATDWLGHTPLHLAAKTGHLEIVEVLLKYGADVNAWDNYGATPLHLAAD 89
Query: 329 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 388
+++VE+LLKHGA + A LH+A +++VE+LLK+GA + A + +
Sbjct: 90 NGHLEIVEVLLKHGADVNAKDYEGFTPLHLAAYDGHLEIVEVLLKYGADVNAQDKFGKTA 149
Query: 389 LHIACKKNRIKVVELLLK 406
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 80.1 bits (196), Expect = 8e-15, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 75/138 (54%)
Query: 302 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 361
V +L+ +GA + AT + LH+A K +++VE+LLK+GA + A LH+A
Sbjct: 30 VRILMANGADVNATDWLGHTPLHLAAKTGHLEIVEVLLKYGADVNAWDNYGATPLHLAAD 89
Query: 362 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 421
+++VE+LLKHGA + A LH+A +++VE+LLK+GA + A + +
Sbjct: 90 NGHLEIVEVLLKHGADVNAKDYEGFTPLHLAAYDGHLEIVEVLLKYGADVNAQDKFGKTA 149
Query: 422 LHIACKKNRIKVVELLLK 439
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 80.1 bits (196), Expect = 8e-15, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 75/138 (54%)
Query: 335 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 394
V +L+ +GA + AT + LH+A K +++VE+LLK+GA + A LH+A
Sbjct: 30 VRILMANGADVNATDWLGHTPLHLAAKTGHLEIVEVLLKYGADVNAWDNYGATPLHLAAD 89
Query: 395 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 454
+++VE+LLKHGA + A LH+A +++VE+LLK+GA + A + +
Sbjct: 90 NGHLEIVEVLLKHGADVNAKDYEGFTPLHLAAYDGHLEIVEVLLKYGADVNAQDKFGKTA 149
Query: 455 LHIACKKNRIKVVELLLK 472
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 80.1 bits (196), Expect = 8e-15, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 75/138 (54%)
Query: 368 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 427
V +L+ +GA + AT + LH+A K +++VE+LLK+GA + A LH+A
Sbjct: 30 VRILMANGADVNATDWLGHTPLHLAAKTGHLEIVEVLLKYGADVNAWDNYGATPLHLAAD 89
Query: 428 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 487
+++VE+LLKHGA + A LH+A +++VE+LLK+GA + A + +
Sbjct: 90 NGHLEIVEVLLKHGADVNAKDYEGFTPLHLAAYDGHLEIVEVLLKYGADVNAQDKFGKTA 149
Query: 488 LHIACKKNRIKVVELLLK 505
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 80.1 bits (196), Expect = 8e-15, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 75/138 (54%)
Query: 401 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 460
V +L+ +GA + AT + LH+A K +++VE+LLK+GA + A LH+A
Sbjct: 30 VRILMANGADVNATDWLGHTPLHLAAKTGHLEIVEVLLKYGADVNAWDNYGATPLHLAAD 89
Query: 461 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 520
+++VE+LLKHGA + A LH+A +++VE+LLK+GA + A + +
Sbjct: 90 NGHLEIVEVLLKHGADVNAKDYEGFTPLHLAAYDGHLEIVEVLLKYGADVNAQDKFGKTA 149
Query: 521 LHIACKKNRIKVVELLLK 538
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 80.1 bits (196), Expect = 8e-15, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 75/138 (54%)
Query: 434 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 493
V +L+ +GA + AT + LH+A K +++VE+LLK+GA + A LH+A
Sbjct: 30 VRILMANGADVNATDWLGHTPLHLAAKTGHLEIVEVLLKYGADVNAWDNYGATPLHLAAD 89
Query: 494 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 553
+++VE+LLKHGA + A LH+A +++VE+LLK+GA + A + +
Sbjct: 90 NGHLEIVEVLLKHGADVNAKDYEGFTPLHLAAYDGHLEIVEVLLKYGADVNAQDKFGKTA 149
Query: 554 LHIACKKNRIKVVELLLK 571
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 80.1 bits (196), Expect = 8e-15, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 75/138 (54%)
Query: 467 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 526
V +L+ +GA + AT + LH+A K +++VE+LLK+GA + A LH+A
Sbjct: 30 VRILMANGADVNATDWLGHTPLHLAAKTGHLEIVEVLLKYGADVNAWDNYGATPLHLAAD 89
Query: 527 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 586
+++VE+LLKHGA + A LH+A +++VE+LLK+GA + A + +
Sbjct: 90 NGHLEIVEVLLKHGADVNAKDYEGFTPLHLAAYDGHLEIVEVLLKYGADVNAQDKFGKTA 149
Query: 587 LHIACKKNRIKVVELLLK 604
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 80.1 bits (196), Expect = 8e-15, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 75/138 (54%)
Query: 500 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 559
V +L+ +GA + AT + LH+A K +++VE+LLK+GA + A LH+A
Sbjct: 30 VRILMANGADVNATDWLGHTPLHLAAKTGHLEIVEVLLKYGADVNAWDNYGATPLHLAAD 89
Query: 560 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 619
+++VE+LLKHGA + A LH+A +++VE+LLK+GA + A + +
Sbjct: 90 NGHLEIVEVLLKHGADVNAKDYEGFTPLHLAAYDGHLEIVEVLLKYGADVNAQDKFGKTA 149
Query: 620 LHIACKKNRIKVVELLLK 637
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 80.1 bits (196), Expect = 8e-15, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 75/138 (54%)
Query: 533 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 592
V +L+ +GA + AT + LH+A K +++VE+LLK+GA + A LH+A
Sbjct: 30 VRILMANGADVNATDWLGHTPLHLAAKTGHLEIVEVLLKYGADVNAWDNYGATPLHLAAD 89
Query: 593 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 652
+++VE+LLKHGA + A LH+A +++VE+LLK+GA + A + +
Sbjct: 90 NGHLEIVEVLLKHGADVNAKDYEGFTPLHLAAYDGHLEIVEVLLKYGADVNAQDKFGKTA 149
Query: 653 LHIACKKNRIKVVELLLK 670
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 80.1 bits (196), Expect = 8e-15, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 75/138 (54%)
Query: 566 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 625
V +L+ +GA + AT + LH+A K +++VE+LLK+GA + A LH+A
Sbjct: 30 VRILMANGADVNATDWLGHTPLHLAAKTGHLEIVEVLLKYGADVNAWDNYGATPLHLAAD 89
Query: 626 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 685
+++VE+LLKHGA + A LH+A +++VE+LLK+GA + A + +
Sbjct: 90 NGHLEIVEVLLKHGADVNAKDYEGFTPLHLAAYDGHLEIVEVLLKYGADVNAQDKFGKTA 149
Query: 686 LHIACKKNRIKVVELLLK 703
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 80.1 bits (196), Expect = 8e-15, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 75/138 (54%)
Query: 599 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 658
V +L+ +GA + AT + LH+A K +++VE+LLK+GA + A LH+A
Sbjct: 30 VRILMANGADVNATDWLGHTPLHLAAKTGHLEIVEVLLKYGADVNAWDNYGATPLHLAAD 89
Query: 659 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 718
+++VE+LLKHGA + A LH+A +++VE+LLK+GA + A + +
Sbjct: 90 NGHLEIVEVLLKHGADVNAKDYEGFTPLHLAAYDGHLEIVEVLLKYGADVNAQDKFGKTA 149
Query: 719 LHIACKKNRIKVVELLLK 736
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 80.1 bits (196), Expect = 8e-15, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 75/138 (54%)
Query: 632 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 691
V +L+ +GA + AT + LH+A K +++VE+LLK+GA + A LH+A
Sbjct: 30 VRILMANGADVNATDWLGHTPLHLAAKTGHLEIVEVLLKYGADVNAWDNYGATPLHLAAD 89
Query: 692 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 751
+++VE+LLKHGA + A LH+A +++VE+LLK+GA + A + +
Sbjct: 90 NGHLEIVEVLLKHGADVNAKDYEGFTPLHLAAYDGHLEIVEVLLKYGADVNAQDKFGKTA 149
Query: 752 LHIACKKNRIKVVELLLK 769
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 80.1 bits (196), Expect = 8e-15, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 75/138 (54%)
Query: 665 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 724
V +L+ +GA + AT + LH+A K +++VE+LLK+GA + A LH+A
Sbjct: 30 VRILMANGADVNATDWLGHTPLHLAAKTGHLEIVEVLLKYGADVNAWDNYGATPLHLAAD 89
Query: 725 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 784
+++VE+LLKHGA + A LH+A +++VE+LLK+GA + A + +
Sbjct: 90 NGHLEIVEVLLKHGADVNAKDYEGFTPLHLAAYDGHLEIVEVLLKYGADVNAQDKFGKTA 149
Query: 785 LHIACKKNRIKVVELLLK 802
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 80.1 bits (196), Expect = 8e-15, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 75/138 (54%)
Query: 698 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 757
V +L+ +GA + AT + LH+A K +++VE+LLK+GA + A LH+A
Sbjct: 30 VRILMANGADVNATDWLGHTPLHLAAKTGHLEIVEVLLKYGADVNAWDNYGATPLHLAAD 89
Query: 758 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 817
+++VE+LLKHGA + A LH+A +++VE+LLK+GA + A + +
Sbjct: 90 NGHLEIVEVLLKHGADVNAKDYEGFTPLHLAAYDGHLEIVEVLLKYGADVNAQDKFGKTA 149
Query: 818 LHIACKKNRIKVVELLLK 835
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 80.1 bits (196), Expect = 8e-15, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 75/138 (54%)
Query: 731 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 790
V +L+ +GA + AT + LH+A K +++VE+LLK+GA + A LH+A
Sbjct: 30 VRILMANGADVNATDWLGHTPLHLAAKTGHLEIVEVLLKYGADVNAWDNYGATPLHLAAD 89
Query: 791 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 850
+++VE+LLKHGA + A LH+A +++VE+LLK+GA + A + +
Sbjct: 90 NGHLEIVEVLLKHGADVNAKDYEGFTPLHLAAYDGHLEIVEVLLKYGADVNAQDKFGKTA 149
Query: 851 LHIACKKNRIKVVELLLK 868
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 80.1 bits (196), Expect = 8e-15, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 75/138 (54%)
Query: 764 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 823
V +L+ +GA + AT + LH+A K +++VE+LLK+GA + A LH+A
Sbjct: 30 VRILMANGADVNATDWLGHTPLHLAAKTGHLEIVEVLLKYGADVNAWDNYGATPLHLAAD 89
Query: 824 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 883
+++VE+LLKHGA + A LH+A +++VE+LLK+GA + A + +
Sbjct: 90 NGHLEIVEVLLKHGADVNAKDYEGFTPLHLAAYDGHLEIVEVLLKYGADVNAQDKFGKTA 149
Query: 884 LHIACKKNRIKVVELLLK 901
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 80.1 bits (196), Expect = 8e-15, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 75/138 (54%)
Query: 797 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 856
V +L+ +GA + AT + LH+A K +++VE+LLK+GA + A LH+A
Sbjct: 30 VRILMANGADVNATDWLGHTPLHLAAKTGHLEIVEVLLKYGADVNAWDNYGATPLHLAAD 89
Query: 857 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 916
+++VE+LLKHGA + A LH+A +++VE+LLK+GA + A + +
Sbjct: 90 NGHLEIVEVLLKHGADVNAKDYEGFTPLHLAAYDGHLEIVEVLLKYGADVNAQDKFGKTA 149
Query: 917 LHIACKKNRIKVVELLLK 934
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 78.2 bits (191), Expect = 3e-14, Method: Composition-based stats.
Identities = 57/170 (33%), Positives = 79/170 (46%), Gaps = 27/170 (15%)
Query: 1142 SASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKG 1201
+A G D +L+ +GADV+ G TPLHL A+ + + E+LLK A V+ G
Sbjct: 21 AARAGQDDEVRILMANGADVNATDWLGHTPLHLAAKTGHLEIVEVLLKYGADVNAWDNYG 80
Query: 1202 FTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRXXXXXXXXXXXXXXYTNTTD-QGFT 1260
TPLH+A G + + +LL A+V N D +GFT
Sbjct: 81 ATPLHLAADNGHLEIVEVLLKHGADV-------------------------NAKDYEGFT 115
Query: 1261 PLHHSAQQGHSTIVALLLDRGASPNATNK-GFTPLHHSAQQGHSTIVALL 1309
PLH +A GH IV +LL GA NA +K G T S G+ + +L
Sbjct: 116 PLHLAAYDGHLEIVEVLLKYGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 77.0 bits (188), Expect = 7e-14, Method: Composition-based stats.
Identities = 43/137 (31%), Positives = 75/137 (54%)
Query: 830 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 889
V +L+ +GA + AT + LH+A K +++VE+LLK+GA + A LH+A
Sbjct: 30 VRILMANGADVNATDWLGHTPLHLAAKTGHLEIVEVLLKYGADVNAWDNYGATPLHLAAD 89
Query: 890 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASSHVVSCYSNVK 949
+++VE+LLKHGA + A LH+A +++VE+LLK+GA + +
Sbjct: 90 NGHLEIVEVLLKHGADVNAKDYEGFTPLHLAAYDGHLEIVEVLLKYGADVNAQDKFGKTA 149
Query: 950 VHVSLNKIQDVSSSILR 966
+S++ + + IL+
Sbjct: 150 FDISIDNGNEDLAEILQ 166
Score = 75.9 bits (185), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/119 (36%), Positives = 64/119 (53%)
Query: 189 TALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEA 248
T LH+AA GH + + LL AD NA G TPLH+A +++VE+LLKHGA + A
Sbjct: 49 TPLHLAAKTGHLEIVEVLLKYGADVNAWDNYGATPLHLAADNGHLEIVEVLLKHGADVNA 108
Query: 249 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 307
LH+A +++VE+LLK+GA + A + + I+ + E+L K
Sbjct: 109 KDYEGFTPLHLAAYDGHLEIVEVLLKYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 74.7 bits (182), Expect = 4e-13, Method: Composition-based stats.
Identities = 54/180 (30%), Positives = 86/180 (47%), Gaps = 44/180 (24%)
Query: 863 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 922
V +L+ +GA + AT + LH+A K +++VE+LLK+GA + A LH+A
Sbjct: 30 VRILMANGADVNATDWLGHTPLHLAAKTGHLEIVEVLLKYGADVNAWDNYGATPLHLAAD 89
Query: 923 KNRIKVVELLLKHGASSHVVSCYSNVKVHVSLNKIQDVSSSILRLATCDVLPQCETRLNF 982
+++VE+LLKHGA DV
Sbjct: 90 NGHLEIVEVLLKHGA---------------------------------DV---------- 106
Query: 983 SNLRVREQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVL 1042
N + E TPLH+A+ G+++IV +LL++GA V++ K TA I+ G E++A +L
Sbjct: 107 -NAKDYEGFTPLHLAAYDGHLEIVEVLLKYGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 69.3 bits (168), Expect = 1e-11, Method: Composition-based stats.
Identities = 45/152 (29%), Positives = 83/152 (54%), Gaps = 22/152 (14%)
Query: 40 AAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISSKTKVR 99
AA+ G+ + V +L++ GA+++ G T LH AA++GH ++E+LL+ GA +++
Sbjct: 21 AARAGQDDEVRILMANGADVNATDWLGHTPLHLAAKTGHLEIVEVLLKYGADVNAWDNYG 80
Query: 100 GFYI---LRSGHEAVIEMLLEQGAPISSKTKVAAVLLENGASLTSTTKKGFTPLHLTGKY 156
+ +GH ++E+LL+ GA +++K +GFTPLHL
Sbjct: 81 ATPLHLAADNGHLEIVEVLLKHGADVNAK-----------------DYEGFTPLHLAAYD 123
Query: 157 GHIKVAKLLLQKDAPVDFQGK--APVDDVTVD 186
GH+++ ++LL+ A V+ Q K D+++D
Sbjct: 124 GHLEIVEVLLKYGADVNAQDKFGKTAFDISID 155
Score = 58.5 bits (140), Expect = 3e-08, Method: Composition-based stats.
Identities = 38/121 (31%), Positives = 66/121 (54%), Gaps = 8/121 (6%)
Query: 3 WTHYWKLHKVTKYSQ-KVINTINPFGSHFQ----HNITPLHVAAKWGKANMVTLLLSRGA 57
W + LH K +++ + +G+ + TPLH+AA G +V +LL GA
Sbjct: 45 WLGHTPLHLAAKTGHLEIVEVLLKYGADVNAWDNYGATPLHLAADNGHLEIVEVLLKHGA 104
Query: 58 NIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISSKTKV--RGFYI-LRSGHEAVIEM 114
+++ K +G T LH AA GH ++E+LL+ GA ++++ K F I + +G+E + E+
Sbjct: 105 DVNAKDYEGFTPLHLAAYDGHLEIVEVLLKYGADVNAQDKFGKTAFDISIDNGNEDLAEI 164
Query: 115 L 115
L
Sbjct: 165 L 165
>pdb|2QYJ|A Chain A, Crystal Structure Of A Designed Full Consensus Ankyrin
Length = 166
Score = 107 bits (266), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 93/158 (58%), Gaps = 13/158 (8%)
Query: 997 ASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKG 1056
A+R G D V +L+ +GA V++ KD YT LH+AA+EG E+ VLL+ GA + + K G
Sbjct: 21 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 80
Query: 1057 FTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMD 1116
+TPLHL + GH+++ ++LL+ A V+ + K+G TPLH+A+ H ++
Sbjct: 81 YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGH-------------LE 127
Query: 1117 IATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAML 1154
I LL+ GA NA+ G T +S G+ D++ +L
Sbjct: 128 IVEVLLKAGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 106 bits (265), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 95/166 (57%), Gaps = 13/166 (7%)
Query: 1022 DLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAP 1081
DL L AA+ GQ++ +L+ NGA + + K G+TPLHL + GH+++ ++LL+ A
Sbjct: 13 DLGKKLLEAARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGAD 72
Query: 1082 VDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHL 1141
V+ + K+G TPLH+A+ H ++I LL+ GA NA+ G+TPLHL
Sbjct: 73 VNAKDKDGYTPLHLAAREGH-------------LEIVEVLLKAGADVNAKDKDGYTPLHL 119
Query: 1142 SASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELL 1187
+A EGH ++ +LL+ GADV+ K G T + +AE+L
Sbjct: 120 AAREGHLEIVEVLLKAGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 100 bits (249), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 79/128 (61%), Gaps = 2/128 (1%)
Query: 1262 LHHSAQQGHSTIVALLLDRGASPNATNK-GFTPLHHSAQQGHSTIVALLLDRGASPNATN 1320
L +A+ G V +L+ GA NA +K G+TPLH +A++GH IV +LL GA NA +
Sbjct: 18 LLEAARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKD 77
Query: 1321 KTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRG 1380
K G+TPLH+A G + + +LL A+V+ G+TPLH +A++GH IV +LL G
Sbjct: 78 KD-GYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAG 136
Query: 1381 ASPNATNK 1388
A NA +K
Sbjct: 137 ADVNAQDK 144
Score = 100 bits (248), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 84/125 (67%)
Query: 984 NLRVREQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLL 1043
N + ++ TPLH+A+R G+++IV +LL+ GA V++ KD YT LH+AA+EG E+ VLL
Sbjct: 41 NAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLL 100
Query: 1044 ENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQN 1103
+ GA + + K G+TPLHL + GH+++ ++LL+ A V+ Q K G T ++ +++
Sbjct: 101 KAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTAFDISIDNGNED 160
Query: 1104 VALLL 1108
+A +L
Sbjct: 161 LAEIL 165
Score = 98.2 bits (243), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 74/128 (57%)
Query: 1106 LLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAA 1165
LL + D L+ GA NA+ G+TPLHL+A EGH ++ +LL+ GADV+
Sbjct: 18 LLEAARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKD 77
Query: 1166 KNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSA 1225
K+G TPLHL A+E + + E+LLK A V+ K G+TPLH+A G + + +LL A
Sbjct: 78 KDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGA 137
Query: 1226 NVTVPKNF 1233
+V F
Sbjct: 138 DVNAQDKF 145
Score = 97.1 bits (240), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 86/156 (55%), Gaps = 13/156 (8%)
Query: 1065 KYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEY 1124
+ G ++L+ A V+ + K+G TPLH+A+ H ++I LL+
Sbjct: 23 RAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGH-------------LEIVEVLLKA 69
Query: 1125 GAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVA 1184
GA NA+ G+TPLHL+A EGH ++ +LL+ GADV+ K+G TPLHL A+E + +
Sbjct: 70 GADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIV 129
Query: 1185 ELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLL 1220
E+LLK A V+ K G T I+ G +A +L
Sbjct: 130 EVLLKAGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 92.4 bits (228), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Query: 1253 NTTDQ-GFTPLHHSAQQGHSTIVALLLDRGASPNATNK-GFTPLHHSAQQGHSTIVALLL 1310
N D+ G+TPLH +A++GH IV +LL GA NA +K G+TPLH +A++GH IV +LL
Sbjct: 41 NAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLL 100
Query: 1311 DRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHS 1370
GA NA +K G+TPLH+A G + + +LL A+V+ G T S G+
Sbjct: 101 KAGADVNAKDKD-GYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTAFDISIDNGNE 159
Query: 1371 TIVALL 1376
+ +L
Sbjct: 160 DLAEIL 165
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 83/145 (57%)
Query: 194 AAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVR 253
AA G + L+ AD NA+ +G+TPLH+A ++ +++VE+LLK GA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 80
Query: 254 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 313
LH+A ++ +++VE+LLK GA + A + LH+A ++ +++VE+LLK GA +
Sbjct: 81 YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 140
Query: 314 ATTEVREPMLHIACKKNRIKVVELL 338
A + + I+ + E+L
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 91.3 bits (225), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 91/154 (59%), Gaps = 26/154 (16%)
Query: 40 AAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISSKTKVR 99
AA+ G+ + V +L++ GA+++ K +DG T LH AAR GH ++E+LL+ GA +++K K
Sbjct: 21 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDK-D 79
Query: 100 GFYIL----RSGHEAVIEMLLEQGAPISSKTKVAAVLLENGASLTSTTKKGFTPLHLTGK 155
G+ L R GH ++E+LL+ GA +++K K G+TPLHL +
Sbjct: 80 GYTPLHLAAREGHLEIVEVLLKAGADVNAK-----------------DKDGYTPLHLAAR 122
Query: 156 YGHIKVAKLLLQKDAPVDFQ---GKAPVDDVTVD 186
GH+++ ++LL+ A V+ Q GK D+++D
Sbjct: 123 EGHLEIVEVLLKAGADVNAQDKFGKTAF-DISID 155
Score = 83.2 bits (204), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 70/120 (58%)
Query: 186 DYLTALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGAS 245
D T LH+AA GH + + LL AD NA+ +G+TPLH+A ++ +++VE+LLK GA
Sbjct: 46 DGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGAD 105
Query: 246 IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 305
+ A + LH+A ++ +++VE+LLK GA + A + + I+ + E+L
Sbjct: 106 VNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 80/145 (55%)
Query: 227 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 286
A + + V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 80
Query: 287 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 346
LH+A ++ +++VE+LLK GA + A + LH+A ++ +++VE+LLK GA +
Sbjct: 81 YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 140
Query: 347 ATTEVREPMLHIACKKNRIKVVELL 371
A + + I+ + E+L
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 80/145 (55%)
Query: 260 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 319
A + + V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 80
Query: 320 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 379
LH+A ++ +++VE+LLK GA + A + LH+A ++ +++VE+LLK GA +
Sbjct: 81 YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 140
Query: 380 ATTEVREPMLHIACKKNRIKVVELL 404
A + + I+ + E+L
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 80/145 (55%)
Query: 293 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 352
A + + V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 80
Query: 353 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 412
LH+A ++ +++VE+LLK GA + A + LH+A ++ +++VE+LLK GA +
Sbjct: 81 YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 140
Query: 413 ATTEVREPMLHIACKKNRIKVVELL 437
A + + I+ + E+L
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 80/145 (55%)
Query: 326 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 385
A + + V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 80
Query: 386 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 445
LH+A ++ +++VE+LLK GA + A + LH+A ++ +++VE+LLK GA +
Sbjct: 81 YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 140
Query: 446 ATTEVREPMLHIACKKNRIKVVELL 470
A + + I+ + E+L
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 80/145 (55%)
Query: 359 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 418
A + + V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 80
Query: 419 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 478
LH+A ++ +++VE+LLK GA + A + LH+A ++ +++VE+LLK GA +
Sbjct: 81 YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 140
Query: 479 ATTEVREPMLHIACKKNRIKVVELL 503
A + + I+ + E+L
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 80/145 (55%)
Query: 392 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 451
A + + V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 80
Query: 452 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 511
LH+A ++ +++VE+LLK GA + A + LH+A ++ +++VE+LLK GA +
Sbjct: 81 YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 140
Query: 512 ATTEVREPMLHIACKKNRIKVVELL 536
A + + I+ + E+L
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 80/145 (55%)
Query: 425 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 484
A + + V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 80
Query: 485 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 544
LH+A ++ +++VE+LLK GA + A + LH+A ++ +++VE+LLK GA +
Sbjct: 81 YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 140
Query: 545 ATTEVREPMLHIACKKNRIKVVELL 569
A + + I+ + E+L
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 80/145 (55%)
Query: 458 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 517
A + + V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 80
Query: 518 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 577
LH+A ++ +++VE+LLK GA + A + LH+A ++ +++VE+LLK GA +
Sbjct: 81 YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 140
Query: 578 ATTEVREPMLHIACKKNRIKVVELL 602
A + + I+ + E+L
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 80/145 (55%)
Query: 491 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 550
A + + V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 80
Query: 551 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 610
LH+A ++ +++VE+LLK GA + A + LH+A ++ +++VE+LLK GA +
Sbjct: 81 YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 140
Query: 611 ATTEVREPMLHIACKKNRIKVVELL 635
A + + I+ + E+L
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 80/145 (55%)
Query: 524 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 583
A + + V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 80
Query: 584 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 643
LH+A ++ +++VE+LLK GA + A + LH+A ++ +++VE+LLK GA +
Sbjct: 81 YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 140
Query: 644 ATTEVREPMLHIACKKNRIKVVELL 668
A + + I+ + E+L
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 80/145 (55%)
Query: 557 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 616
A + + V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 80
Query: 617 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 676
LH+A ++ +++VE+LLK GA + A + LH+A ++ +++VE+LLK GA +
Sbjct: 81 YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 140
Query: 677 ATTEVREPMLHIACKKNRIKVVELL 701
A + + I+ + E+L
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 80/145 (55%)
Query: 590 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 649
A + + V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 80
Query: 650 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 709
LH+A ++ +++VE+LLK GA + A + LH+A ++ +++VE+LLK GA +
Sbjct: 81 YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 140
Query: 710 ATTEVREPMLHIACKKNRIKVVELL 734
A + + I+ + E+L
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 80/145 (55%)
Query: 623 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 682
A + + V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 80
Query: 683 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 742
LH+A ++ +++VE+LLK GA + A + LH+A ++ +++VE+LLK GA +
Sbjct: 81 YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 140
Query: 743 ATTEVREPMLHIACKKNRIKVVELL 767
A + + I+ + E+L
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 80/145 (55%)
Query: 656 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 715
A + + V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 80
Query: 716 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 775
LH+A ++ +++VE+LLK GA + A + LH+A ++ +++VE+LLK GA +
Sbjct: 81 YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 140
Query: 776 ATTEVREPMLHIACKKNRIKVVELL 800
A + + I+ + E+L
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 80/145 (55%)
Query: 689 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 748
A + + V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 80
Query: 749 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 808
LH+A ++ +++VE+LLK GA + A + LH+A ++ +++VE+LLK GA +
Sbjct: 81 YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 140
Query: 809 ATTEVREPMLHIACKKNRIKVVELL 833
A + + I+ + E+L
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 80/145 (55%)
Query: 722 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 781
A + + V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 80
Query: 782 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 841
LH+A ++ +++VE+LLK GA + A + LH+A ++ +++VE+LLK GA +
Sbjct: 81 YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 140
Query: 842 ATTEVREPMLHIACKKNRIKVVELL 866
A + + I+ + E+L
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 80/145 (55%)
Query: 755 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 814
A + + V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 80
Query: 815 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 874
LH+A ++ +++VE+LLK GA + A + LH+A ++ +++VE+LLK GA +
Sbjct: 81 YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 140
Query: 875 ATTEVREPMLHIACKKNRIKVVELL 899
A + + I+ + E+L
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 80/145 (55%)
Query: 788 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 847
A + + V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 80
Query: 848 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 907
LH+A ++ +++VE+LLK GA + A + LH+A ++ +++VE+LLK GA +
Sbjct: 81 YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 140
Query: 908 ATTEVREPMLHIACKKNRIKVVELL 932
A + + I+ + E+L
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 66/103 (64%), Gaps = 5/103 (4%)
Query: 31 QHNITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGA 90
+ TPLH+AA+ G +V +LL GA+++ K +DG T LH AAR GH ++E+LL+ GA
Sbjct: 45 KDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGA 104
Query: 91 PISSKTKVRGFYIL----RSGHEAVIEMLLEQGAPISSKTKVA 129
+++K K G+ L R GH ++E+LL+ GA ++++ K
Sbjct: 105 DVNAKDK-DGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFG 146
Score = 77.0 bits (188), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 81/146 (55%)
Query: 821 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 880
A + + V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 80
Query: 881 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASSH 940
LH+A ++ +++VE+LLK GA + A + LH+A ++ +++VE+LLK GA +
Sbjct: 81 YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 140
Query: 941 VVSCYSNVKVHVSLNKIQDVSSSILR 966
+ +S++ + + IL+
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQ 166
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 91/189 (48%), Gaps = 44/189 (23%)
Query: 854 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 913
A + + V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 80
Query: 914 EPMLHIACKKNRIKVVELLLKHGASSHVVSCYSNVKVHVSLNKIQDVSSSILRLATCDVL 973
LH+A ++ +++VE+LLK GA DV
Sbjct: 81 YTPLHLAAREGHLEIVEVLLKAGA---------------------DV------------- 106
Query: 974 PQCETRLNFSNLRVREQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKE 1033
N + ++ TPLH+A+R G+++IV +LL+ GA V++ K TA I+
Sbjct: 107 ----------NAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTAFDISIDN 156
Query: 1034 GQEEVAAVL 1042
G E++A +L
Sbjct: 157 GNEDLAEIL 165
Score = 38.9 bits (89), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 34/55 (61%)
Query: 31 QHNITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEML 85
+ TPLH+AA+ G +V +LL GA+++ + + G TA + +G+E + E+L
Sbjct: 111 KDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165
>pdb|3NOG|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb:
Plasticity Of The Interface
pdb|3NOG|E Chain E, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb:
Plasticity Of The Interface
Length = 169
Score = 106 bits (264), Expect = 1e-22, Method: Composition-based stats.
Identities = 62/170 (36%), Positives = 95/170 (55%), Gaps = 13/170 (7%)
Query: 1022 DLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAP 1081
DL L AA+ GQ++ +L+ NGA + ++ G+TPLHL +GH+++ ++LL+ A
Sbjct: 13 DLGKKLLEAARAGQDDEVRILMANGADVNASDHVGWTPLHLAAYFGHLEIVEVLLKNGAD 72
Query: 1082 VDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHL 1141
V+ GVTPLH+A+ H +++ LL+ GA NA GFTPLHL
Sbjct: 73 VNADDSLGVTPLHLAADRGH-------------LEVVEVLLKNGADVNANDHNGFTPLHL 119
Query: 1142 SASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNN 1191
+A+ GH ++ +LL+HGADV+ K G T + +AE+L K N
Sbjct: 120 AANIGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169
Score = 95.5 bits (236), Expect = 2e-19, Method: Composition-based stats.
Identities = 56/158 (35%), Positives = 88/158 (55%), Gaps = 13/158 (8%)
Query: 997 ASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKG 1056
A+R G D V +L+ +GA V+++ +T LH+AA G E+ VLL+NGA + + G
Sbjct: 21 AARAGQDDEVRILMANGADVNASDHVGWTPLHLAAYFGHLEIVEVLLKNGADVNADDSLG 80
Query: 1057 FTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMD 1116
TPLHL GH++V ++LL+ A V+ NG TPLH+A++ H ++
Sbjct: 81 VTPLHLAADRGHLEVVEVLLKNGADVNANDHNGFTPLHLAANIGH-------------LE 127
Query: 1117 IATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAML 1154
I LL++GA NA+ G T +S G+ D++ +L
Sbjct: 128 IVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 92.4 bits (228), Expect = 1e-18, Method: Composition-based stats.
Identities = 52/144 (36%), Positives = 79/144 (54%), Gaps = 8/144 (5%)
Query: 131 VLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKAPVDDVTVDYLTA 190
+L+ NGA + ++ G+TPLHL +GH+++ ++LL+ A V+ V T
Sbjct: 32 ILMANGADVNASDHVGWTPLHLAAYFGHLEIVEVLLKNGADVNADDSLGV--------TP 83
Query: 191 LHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATT 250
LH+AA GH V + LL AD NA NGFTPLH+A +++VE+LLKHGA + A
Sbjct: 84 LHLAADRGHLEVVEVLLKNGADVNANDHNGFTPLHLAANIGHLEIVEVLLKHGADVNAQD 143
Query: 251 EVREPMLHIACKKNRIKVVELLLK 274
+ + I+ + E+L K
Sbjct: 144 KFGKTAFDISIDNGNEDLAEILQK 167
Score = 92.0 bits (227), Expect = 2e-18, Method: Composition-based stats.
Identities = 51/128 (39%), Positives = 71/128 (55%)
Query: 1106 LLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAA 1165
LL + D L+ GA NA G+TPLHL+A GH ++ +LL++GADV+
Sbjct: 18 LLEAARAGQDDEVRILMANGADVNASDHVGWTPLHLAAYFGHLEIVEVLLKNGADVNADD 77
Query: 1166 KNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSA 1225
G+TPLHL A + V E+LLKN A V+ GFTPLH+A + G + + +LL A
Sbjct: 78 SLGVTPLHLAADRGHLEVVEVLLKNGADVNANDHNGFTPLHLAANIGHLEIVEVLLKHGA 137
Query: 1226 NVTVPKNF 1233
+V F
Sbjct: 138 DVNAQDKF 145
Score = 89.7 bits (221), Expect = 1e-17, Method: Composition-based stats.
Identities = 54/128 (42%), Positives = 74/128 (57%), Gaps = 2/128 (1%)
Query: 1262 LHHSAQQGHSTIVALLLDRGASPNATNK-GFTPLHHSAQQGHSTIVALLLDRGASPNATN 1320
L +A+ G V +L+ GA NA++ G+TPLH +A GH IV +LL GA NA +
Sbjct: 18 LLEAARAGQDDEVRILMANGADVNASDHVGWTPLHLAAYFGHLEIVEVLLKNGADVNA-D 76
Query: 1321 KTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRG 1380
+ G TPLH+A G + + +LL A+V+ GFTPLH +A GH IV +LL G
Sbjct: 77 DSLGVTPLHLAADRGHLEVVEVLLKNGADVNANDHNGFTPLHLAANIGHLEIVEVLLKHG 136
Query: 1381 ASPNATNK 1388
A NA +K
Sbjct: 137 ADVNAQDK 144
Score = 89.0 bits (219), Expect = 2e-17, Method: Composition-based stats.
Identities = 54/157 (34%), Positives = 82/157 (52%), Gaps = 13/157 (8%)
Query: 1064 GKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLE 1123
+ G ++L+ A V+ G TPLH+A+++ H ++I LL+
Sbjct: 22 ARAGQDDEVRILMANGADVNASDHVGWTPLHLAAYFGH-------------LEIVEVLLK 68
Query: 1124 YGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGV 1183
GA NA+ G TPLHL+A GH ++ +LL++GADV+ NG TPLHL A + +
Sbjct: 69 NGADVNADDSLGVTPLHLAADRGHLEVVEVLLKNGADVNANDHNGFTPLHLAANIGHLEI 128
Query: 1184 AELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLL 1220
E+LLK+ A V+ K G T I+ G +A +L
Sbjct: 129 VEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 87.8 bits (216), Expect = 4e-17, Method: Composition-based stats.
Identities = 46/117 (39%), Positives = 74/117 (63%)
Query: 992 TPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTS 1051
TPLH+A+ G+++IV +LL++GA V++ T LH+AA G EV VLL+NGA + +
Sbjct: 49 TPLHLAAYFGHLEIVEVLLKNGADVNADDSLGVTPLHLAADRGHLEVVEVLLKNGADVNA 108
Query: 1052 TTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLL 1108
GFTPLHL GH+++ ++LL+ A V+ Q K G T ++ ++++A +L
Sbjct: 109 NDHNGFTPLHLAANIGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 84.3 bits (207), Expect = 5e-16, Method: Composition-based stats.
Identities = 50/147 (34%), Positives = 79/147 (53%)
Query: 194 AAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVR 253
AA G + L+ AD NA G+TPLH+A +++VE+LLK+GA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNASDHVGWTPLHLAAYFGHLEIVEVLLKNGADVNADDSLG 80
Query: 254 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 313
LH+A + ++VVE+LLK+GA + A LH+A +++VE+LLKHGA +
Sbjct: 81 VTPLHLAADRGHLEVVEVLLKNGADVNANDHNGFTPLHLAANIGHLEIVEVLLKHGADVN 140
Query: 314 ATTEVREPMLHIACKKNRIKVVELLLK 340
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 82.8 bits (203), Expect = 1e-15, Method: Composition-based stats.
Identities = 51/126 (40%), Positives = 70/126 (55%), Gaps = 3/126 (2%)
Query: 1253 NTTDQ-GFTPLHHSAQQGHSTIVALLLDRGASPNATNK-GFTPLHHSAQQGHSTIVALLL 1310
N +D G+TPLH +A GH IV +LL GA NA + G TPLH +A +GH +V +LL
Sbjct: 41 NASDHVGWTPLHLAAYFGHLEIVEVLLKNGADVNADDSLGVTPLHLAADRGHLEVVEVLL 100
Query: 1311 DRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHS 1370
GA NA N GFTPLH+A + G + + +LL A+V+ G T S G+
Sbjct: 101 KNGADVNA-NDHNGFTPLHLAANIGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNE 159
Query: 1371 TIVALL 1376
+ +L
Sbjct: 160 DLAEIL 165
Score = 78.2 bits (191), Expect = 3e-14, Method: Composition-based stats.
Identities = 44/119 (36%), Positives = 66/119 (55%)
Query: 189 TALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEA 248
T LH+AA+ GH + + LL AD NA G TPLH+A + ++VVE+LLK+GA + A
Sbjct: 49 TPLHLAAYFGHLEIVEVLLKNGADVNADDSLGVTPLHLAADRGHLEVVEVLLKNGADVNA 108
Query: 249 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 307
LH+A +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 109 NDHNGFTPLHLAANIGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 77.4 bits (189), Expect = 5e-14, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 76/138 (55%)
Query: 236 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 295
V +L+ +GA + A+ V LH+A +++VE+LLK+GA + A + LH+A
Sbjct: 30 VRILMANGADVNASDHVGWTPLHLAAYFGHLEIVEVLLKNGADVNADDSLGVTPLHLAAD 89
Query: 296 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 355
+ ++VVE+LLK+GA + A LH+A +++VE+LLKHGA + A + +
Sbjct: 90 RGHLEVVEVLLKNGADVNANDHNGFTPLHLAANIGHLEIVEVLLKHGADVNAQDKFGKTA 149
Query: 356 LHIACKKNRIKVVELLLK 373
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 77.4 bits (189), Expect = 5e-14, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 76/138 (55%)
Query: 269 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 328
V +L+ +GA + A+ V LH+A +++VE+LLK+GA + A + LH+A
Sbjct: 30 VRILMANGADVNASDHVGWTPLHLAAYFGHLEIVEVLLKNGADVNADDSLGVTPLHLAAD 89
Query: 329 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 388
+ ++VVE+LLK+GA + A LH+A +++VE+LLKHGA + A + +
Sbjct: 90 RGHLEVVEVLLKNGADVNANDHNGFTPLHLAANIGHLEIVEVLLKHGADVNAQDKFGKTA 149
Query: 389 LHIACKKNRIKVVELLLK 406
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 77.4 bits (189), Expect = 5e-14, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 76/138 (55%)
Query: 302 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 361
V +L+ +GA + A+ V LH+A +++VE+LLK+GA + A + LH+A
Sbjct: 30 VRILMANGADVNASDHVGWTPLHLAAYFGHLEIVEVLLKNGADVNADDSLGVTPLHLAAD 89
Query: 362 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 421
+ ++VVE+LLK+GA + A LH+A +++VE+LLKHGA + A + +
Sbjct: 90 RGHLEVVEVLLKNGADVNANDHNGFTPLHLAANIGHLEIVEVLLKHGADVNAQDKFGKTA 149
Query: 422 LHIACKKNRIKVVELLLK 439
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 77.4 bits (189), Expect = 5e-14, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 76/138 (55%)
Query: 335 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 394
V +L+ +GA + A+ V LH+A +++VE+LLK+GA + A + LH+A
Sbjct: 30 VRILMANGADVNASDHVGWTPLHLAAYFGHLEIVEVLLKNGADVNADDSLGVTPLHLAAD 89
Query: 395 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 454
+ ++VVE+LLK+GA + A LH+A +++VE+LLKHGA + A + +
Sbjct: 90 RGHLEVVEVLLKNGADVNANDHNGFTPLHLAANIGHLEIVEVLLKHGADVNAQDKFGKTA 149
Query: 455 LHIACKKNRIKVVELLLK 472
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 77.4 bits (189), Expect = 5e-14, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 76/138 (55%)
Query: 368 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 427
V +L+ +GA + A+ V LH+A +++VE+LLK+GA + A + LH+A
Sbjct: 30 VRILMANGADVNASDHVGWTPLHLAAYFGHLEIVEVLLKNGADVNADDSLGVTPLHLAAD 89
Query: 428 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 487
+ ++VVE+LLK+GA + A LH+A +++VE+LLKHGA + A + +
Sbjct: 90 RGHLEVVEVLLKNGADVNANDHNGFTPLHLAANIGHLEIVEVLLKHGADVNAQDKFGKTA 149
Query: 488 LHIACKKNRIKVVELLLK 505
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 77.4 bits (189), Expect = 5e-14, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 76/138 (55%)
Query: 401 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 460
V +L+ +GA + A+ V LH+A +++VE+LLK+GA + A + LH+A
Sbjct: 30 VRILMANGADVNASDHVGWTPLHLAAYFGHLEIVEVLLKNGADVNADDSLGVTPLHLAAD 89
Query: 461 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 520
+ ++VVE+LLK+GA + A LH+A +++VE+LLKHGA + A + +
Sbjct: 90 RGHLEVVEVLLKNGADVNANDHNGFTPLHLAANIGHLEIVEVLLKHGADVNAQDKFGKTA 149
Query: 521 LHIACKKNRIKVVELLLK 538
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 77.4 bits (189), Expect = 5e-14, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 76/138 (55%)
Query: 434 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 493
V +L+ +GA + A+ V LH+A +++VE+LLK+GA + A + LH+A
Sbjct: 30 VRILMANGADVNASDHVGWTPLHLAAYFGHLEIVEVLLKNGADVNADDSLGVTPLHLAAD 89
Query: 494 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 553
+ ++VVE+LLK+GA + A LH+A +++VE+LLKHGA + A + +
Sbjct: 90 RGHLEVVEVLLKNGADVNANDHNGFTPLHLAANIGHLEIVEVLLKHGADVNAQDKFGKTA 149
Query: 554 LHIACKKNRIKVVELLLK 571
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 77.4 bits (189), Expect = 5e-14, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 76/138 (55%)
Query: 467 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 526
V +L+ +GA + A+ V LH+A +++VE+LLK+GA + A + LH+A
Sbjct: 30 VRILMANGADVNASDHVGWTPLHLAAYFGHLEIVEVLLKNGADVNADDSLGVTPLHLAAD 89
Query: 527 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 586
+ ++VVE+LLK+GA + A LH+A +++VE+LLKHGA + A + +
Sbjct: 90 RGHLEVVEVLLKNGADVNANDHNGFTPLHLAANIGHLEIVEVLLKHGADVNAQDKFGKTA 149
Query: 587 LHIACKKNRIKVVELLLK 604
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 77.4 bits (189), Expect = 5e-14, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 76/138 (55%)
Query: 500 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 559
V +L+ +GA + A+ V LH+A +++VE+LLK+GA + A + LH+A
Sbjct: 30 VRILMANGADVNASDHVGWTPLHLAAYFGHLEIVEVLLKNGADVNADDSLGVTPLHLAAD 89
Query: 560 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 619
+ ++VVE+LLK+GA + A LH+A +++VE+LLKHGA + A + +
Sbjct: 90 RGHLEVVEVLLKNGADVNANDHNGFTPLHLAANIGHLEIVEVLLKHGADVNAQDKFGKTA 149
Query: 620 LHIACKKNRIKVVELLLK 637
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 77.4 bits (189), Expect = 5e-14, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 76/138 (55%)
Query: 533 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 592
V +L+ +GA + A+ V LH+A +++VE+LLK+GA + A + LH+A
Sbjct: 30 VRILMANGADVNASDHVGWTPLHLAAYFGHLEIVEVLLKNGADVNADDSLGVTPLHLAAD 89
Query: 593 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 652
+ ++VVE+LLK+GA + A LH+A +++VE+LLKHGA + A + +
Sbjct: 90 RGHLEVVEVLLKNGADVNANDHNGFTPLHLAANIGHLEIVEVLLKHGADVNAQDKFGKTA 149
Query: 653 LHIACKKNRIKVVELLLK 670
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 77.4 bits (189), Expect = 5e-14, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 76/138 (55%)
Query: 566 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 625
V +L+ +GA + A+ V LH+A +++VE+LLK+GA + A + LH+A
Sbjct: 30 VRILMANGADVNASDHVGWTPLHLAAYFGHLEIVEVLLKNGADVNADDSLGVTPLHLAAD 89
Query: 626 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 685
+ ++VVE+LLK+GA + A LH+A +++VE+LLKHGA + A + +
Sbjct: 90 RGHLEVVEVLLKNGADVNANDHNGFTPLHLAANIGHLEIVEVLLKHGADVNAQDKFGKTA 149
Query: 686 LHIACKKNRIKVVELLLK 703
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 77.4 bits (189), Expect = 5e-14, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 76/138 (55%)
Query: 599 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 658
V +L+ +GA + A+ V LH+A +++VE+LLK+GA + A + LH+A
Sbjct: 30 VRILMANGADVNASDHVGWTPLHLAAYFGHLEIVEVLLKNGADVNADDSLGVTPLHLAAD 89
Query: 659 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 718
+ ++VVE+LLK+GA + A LH+A +++VE+LLKHGA + A + +
Sbjct: 90 RGHLEVVEVLLKNGADVNANDHNGFTPLHLAANIGHLEIVEVLLKHGADVNAQDKFGKTA 149
Query: 719 LHIACKKNRIKVVELLLK 736
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 77.4 bits (189), Expect = 5e-14, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 76/138 (55%)
Query: 632 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 691
V +L+ +GA + A+ V LH+A +++VE+LLK+GA + A + LH+A
Sbjct: 30 VRILMANGADVNASDHVGWTPLHLAAYFGHLEIVEVLLKNGADVNADDSLGVTPLHLAAD 89
Query: 692 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 751
+ ++VVE+LLK+GA + A LH+A +++VE+LLKHGA + A + +
Sbjct: 90 RGHLEVVEVLLKNGADVNANDHNGFTPLHLAANIGHLEIVEVLLKHGADVNAQDKFGKTA 149
Query: 752 LHIACKKNRIKVVELLLK 769
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 77.4 bits (189), Expect = 5e-14, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 76/138 (55%)
Query: 665 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 724
V +L+ +GA + A+ V LH+A +++VE+LLK+GA + A + LH+A
Sbjct: 30 VRILMANGADVNASDHVGWTPLHLAAYFGHLEIVEVLLKNGADVNADDSLGVTPLHLAAD 89
Query: 725 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 784
+ ++VVE+LLK+GA + A LH+A +++VE+LLKHGA + A + +
Sbjct: 90 RGHLEVVEVLLKNGADVNANDHNGFTPLHLAANIGHLEIVEVLLKHGADVNAQDKFGKTA 149
Query: 785 LHIACKKNRIKVVELLLK 802
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 77.4 bits (189), Expect = 5e-14, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 76/138 (55%)
Query: 698 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 757
V +L+ +GA + A+ V LH+A +++VE+LLK+GA + A + LH+A
Sbjct: 30 VRILMANGADVNASDHVGWTPLHLAAYFGHLEIVEVLLKNGADVNADDSLGVTPLHLAAD 89
Query: 758 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 817
+ ++VVE+LLK+GA + A LH+A +++VE+LLKHGA + A + +
Sbjct: 90 RGHLEVVEVLLKNGADVNANDHNGFTPLHLAANIGHLEIVEVLLKHGADVNAQDKFGKTA 149
Query: 818 LHIACKKNRIKVVELLLK 835
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 77.4 bits (189), Expect = 5e-14, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 76/138 (55%)
Query: 731 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 790
V +L+ +GA + A+ V LH+A +++VE+LLK+GA + A + LH+A
Sbjct: 30 VRILMANGADVNASDHVGWTPLHLAAYFGHLEIVEVLLKNGADVNADDSLGVTPLHLAAD 89
Query: 791 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 850
+ ++VVE+LLK+GA + A LH+A +++VE+LLKHGA + A + +
Sbjct: 90 RGHLEVVEVLLKNGADVNANDHNGFTPLHLAANIGHLEIVEVLLKHGADVNAQDKFGKTA 149
Query: 851 LHIACKKNRIKVVELLLK 868
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 77.4 bits (189), Expect = 5e-14, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 76/138 (55%)
Query: 764 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 823
V +L+ +GA + A+ V LH+A +++VE+LLK+GA + A + LH+A
Sbjct: 30 VRILMANGADVNASDHVGWTPLHLAAYFGHLEIVEVLLKNGADVNADDSLGVTPLHLAAD 89
Query: 824 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 883
+ ++VVE+LLK+GA + A LH+A +++VE+LLKHGA + A + +
Sbjct: 90 RGHLEVVEVLLKNGADVNANDHNGFTPLHLAANIGHLEIVEVLLKHGADVNAQDKFGKTA 149
Query: 884 LHIACKKNRIKVVELLLK 901
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 77.4 bits (189), Expect = 5e-14, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 76/138 (55%)
Query: 797 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 856
V +L+ +GA + A+ V LH+A +++VE+LLK+GA + A + LH+A
Sbjct: 30 VRILMANGADVNASDHVGWTPLHLAAYFGHLEIVEVLLKNGADVNADDSLGVTPLHLAAD 89
Query: 857 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 916
+ ++VVE+LLK+GA + A LH+A +++VE+LLKHGA + A + +
Sbjct: 90 RGHLEVVEVLLKNGADVNANDHNGFTPLHLAANIGHLEIVEVLLKHGADVNAQDKFGKTA 149
Query: 917 LHIACKKNRIKVVELLLK 934
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 74.3 bits (181), Expect = 4e-13, Method: Composition-based stats.
Identities = 43/137 (31%), Positives = 76/137 (55%)
Query: 830 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 889
V +L+ +GA + A+ V LH+A +++VE+LLK+GA + A + LH+A
Sbjct: 30 VRILMANGADVNASDHVGWTPLHLAAYFGHLEIVEVLLKNGADVNADDSLGVTPLHLAAD 89
Query: 890 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASSHVVSCYSNVK 949
+ ++VVE+LLK+GA + A LH+A +++VE+LLKHGA + +
Sbjct: 90 RGHLEVVEVLLKNGADVNANDHNGFTPLHLAANIGHLEIVEVLLKHGADVNAQDKFGKTA 149
Query: 950 VHVSLNKIQDVSSSILR 966
+S++ + + IL+
Sbjct: 150 FDISIDNGNEDLAEILQ 166
Score = 72.0 bits (175), Expect = 2e-12, Method: Composition-based stats.
Identities = 47/149 (31%), Positives = 79/149 (53%), Gaps = 16/149 (10%)
Query: 40 AAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISSKTKVR 99
AA+ G+ + V +L++ GA+++ G T LH AA GH ++E+LL+ GA +++ +
Sbjct: 21 AARAGQDDEVRILMANGADVNASDHVGWTPLHLAAYFGHLEIVEVLLKNGADVNADDSL- 79
Query: 100 GFYILRSGHEAVIEMLLEQGAPISSKTKVAAVLLENGASLTSTTKKGFTPLHLTGKYGHI 159
V + L A +V VLL+NGA + + GFTPLHL GH+
Sbjct: 80 ----------GVTPLHL---AADRGHLEVVEVLLKNGADVNANDHNGFTPLHLAANIGHL 126
Query: 160 KVAKLLLQKDAPVDFQGK--APVDDVTVD 186
++ ++LL+ A V+ Q K D+++D
Sbjct: 127 EIVEVLLKHGADVNAQDKFGKTAFDISID 155
Score = 63.9 bits (154), Expect = 6e-10, Method: Composition-based stats.
Identities = 37/97 (38%), Positives = 59/97 (60%), Gaps = 5/97 (5%)
Query: 35 TPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISS 94
TPLH+AA +G +V +LL GA+++ G+T LH AA GH V+E+LL+ GA +++
Sbjct: 49 TPLHLAAYFGHLEIVEVLLKNGADVNADDSLGVTPLHLAADRGHLEVVEVLLKNGADVNA 108
Query: 95 KTKVRGFYILR----SGHEAVIEMLLEQGAPISSKTK 127
GF L GH ++E+LL+ GA ++++ K
Sbjct: 109 NDH-NGFTPLHLAANIGHLEIVEVLLKHGADVNAQDK 144
Score = 57.0 bits (136), Expect = 8e-08, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 53/85 (62%), Gaps = 3/85 (3%)
Query: 34 ITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPIS 93
+TPLH+AA G +V +LL GA+++ +G T LH AA GH ++E+LL+ GA ++
Sbjct: 81 VTPLHLAADRGHLEVVEVLLKNGADVNANDHNGFTPLHLAANIGHLEIVEVLLKHGADVN 140
Query: 94 SKTKV--RGFYI-LRSGHEAVIEML 115
++ K F I + +G+E + E+L
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 38.9 bits (89), Expect = 0.021, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 32 HN-ITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEML 85
HN TPLH+AA G +V +LL GA+++ + + G TA + +G+E + E+L
Sbjct: 111 HNGFTPLHLAANIGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165
>pdb|3ZU7|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 169
Score = 105 bits (262), Expect = 2e-22, Method: Composition-based stats.
Identities = 62/170 (36%), Positives = 93/170 (54%), Gaps = 13/170 (7%)
Query: 1022 DLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAP 1081
DL L AA+ GQ++ +L+ NGA + + +G TPLHL GH ++ ++LL+ A
Sbjct: 13 DLGKKLLEAARAGQDDEVRILMANGADVNAHDDQGSTPLHLAAWIGHPEIVEVLLKHGAD 72
Query: 1082 VDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHL 1141
V+ + +G TPLH+A+ H ++I LL+YGA NA+ G TPLHL
Sbjct: 73 VNARDTDGWTPLHLAADNGH-------------LEIVEVLLKYGADVNAQDAYGLTPLHL 119
Query: 1142 SASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNN 1191
+A GH ++ +LL+HGADV+ K G T + +AE+L K N
Sbjct: 120 AADRGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169
Score = 91.3 bits (225), Expect = 3e-18, Method: Composition-based stats.
Identities = 54/158 (34%), Positives = 87/158 (55%), Gaps = 13/158 (8%)
Query: 997 ASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKG 1056
A+R G D V +L+ +GA V++ T LH+AA G E+ VLL++GA + + G
Sbjct: 21 AARAGQDDEVRILMANGADVNAHDDQGSTPLHLAAWIGHPEIVEVLLKHGADVNARDTDG 80
Query: 1057 FTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMD 1116
+TPLHL GH+++ ++LL+ A V+ Q G+TPLH+A+ H ++
Sbjct: 81 WTPLHLAADNGHLEIVEVLLKYGADVNAQDAYGLTPLHLAADRGH-------------LE 127
Query: 1117 IATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAML 1154
I LL++GA NA+ G T +S G+ D++ +L
Sbjct: 128 IVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 89.4 bits (220), Expect = 1e-17, Method: Composition-based stats.
Identities = 54/157 (34%), Positives = 80/157 (50%), Gaps = 13/157 (8%)
Query: 1064 GKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLE 1123
+ G ++L+ A V+ G TPLH+A+ H +I LL+
Sbjct: 22 ARAGQDDEVRILMANGADVNAHDDQGSTPLHLAAWIGHP-------------EIVEVLLK 68
Query: 1124 YGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGV 1183
+GA NA G+TPLHL+A GH ++ +LL++GADV+ GLTPLHL A + +
Sbjct: 69 HGADVNARDTDGWTPLHLAADNGHLEIVEVLLKYGADVNAQDAYGLTPLHLAADRGHLEI 128
Query: 1184 AELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLL 1220
E+LLK+ A V+ K G T I+ G +A +L
Sbjct: 129 VEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 89.0 bits (219), Expect = 2e-17, Method: Composition-based stats.
Identities = 54/128 (42%), Positives = 74/128 (57%), Gaps = 2/128 (1%)
Query: 1262 LHHSAQQGHSTIVALLLDRGASPNA-TNKGFTPLHHSAQQGHSTIVALLLDRGASPNATN 1320
L +A+ G V +L+ GA NA ++G TPLH +A GH IV +LL GA NA +
Sbjct: 18 LLEAARAGQDDEVRILMANGADVNAHDDQGSTPLHLAAWIGHPEIVEVLLKHGADVNARD 77
Query: 1321 KTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRG 1380
T G+TPLH+A G + + +LL A+V+ G TPLH +A +GH IV +LL G
Sbjct: 78 -TDGWTPLHLAADNGHLEIVEVLLKYGADVNAQDAYGLTPLHLAADRGHLEIVEVLLKHG 136
Query: 1381 ASPNATNK 1388
A NA +K
Sbjct: 137 ADVNAQDK 144
Score = 87.4 bits (215), Expect = 5e-17, Method: Composition-based stats.
Identities = 45/117 (38%), Positives = 74/117 (63%)
Query: 992 TPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTS 1051
TPLH+A+ +G+ +IV +LL+HGA V++ D +T LH+AA G E+ VLL+ GA + +
Sbjct: 49 TPLHLAAWIGHPEIVEVLLKHGADVNARDTDGWTPLHLAADNGHLEIVEVLLKYGADVNA 108
Query: 1052 TTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLL 1108
G TPLHL GH+++ ++LL+ A V+ Q K G T ++ ++++A +L
Sbjct: 109 QDAYGLTPLHLAADRGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 87.0 bits (214), Expect = 6e-17, Method: Composition-based stats.
Identities = 49/128 (38%), Positives = 67/128 (52%)
Query: 1106 LLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAA 1165
LL + D L+ GA NA G TPLHL+A GH ++ +LL+HGADV+
Sbjct: 18 LLEAARAGQDDEVRILMANGADVNAHDDQGSTPLHLAAWIGHPEIVEVLLKHGADVNARD 77
Query: 1166 KNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSA 1225
+G TPLHL A + + E+LLK A V+ G TPLH+A G + + +LL A
Sbjct: 78 TDGWTPLHLAADNGHLEIVEVLLKYGADVNAQDAYGLTPLHLAADRGHLEIVEVLLKHGA 137
Query: 1226 NVTVPKNF 1233
+V F
Sbjct: 138 DVNAQDKF 145
Score = 85.5 bits (210), Expect = 2e-16, Method: Composition-based stats.
Identities = 49/144 (34%), Positives = 77/144 (53%), Gaps = 8/144 (5%)
Query: 131 VLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKAPVDDVTVDYLTA 190
+L+ NGA + + +G TPLHL GH ++ ++LL+ A V+ + D T
Sbjct: 32 ILMANGADVNAHDDQGSTPLHLAAWIGHPEIVEVLLKHGADVNAR--------DTDGWTP 83
Query: 191 LHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATT 250
LH+AA GH + + LL AD NA+ G TPLH+A + +++VE+LLKHGA + A
Sbjct: 84 LHLAADNGHLEIVEVLLKYGADVNAQDAYGLTPLHLAADRGHLEIVEVLLKHGADVNAQD 143
Query: 251 EVREPMLHIACKKNRIKVVELLLK 274
+ + I+ + E+L K
Sbjct: 144 KFGKTAFDISIDNGNEDLAEILQK 167
Score = 84.7 bits (208), Expect = 3e-16, Method: Composition-based stats.
Identities = 44/119 (36%), Positives = 68/119 (57%)
Query: 189 TALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEA 248
T LH+AA GH + + LL AD NAR +G+TPLH+A +++VE+LLK+GA + A
Sbjct: 49 TPLHLAAWIGHPEIVEVLLKHGADVNARDTDGWTPLHLAADNGHLEIVEVLLKYGADVNA 108
Query: 249 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 307
LH+A + +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 109 QDAYGLTPLHLAADRGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 84.0 bits (206), Expect = 5e-16, Method: Composition-based stats.
Identities = 50/147 (34%), Positives = 76/147 (51%)
Query: 194 AAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVR 253
AA G + L+ AD NA G TPLH+A ++VE+LLKHGA + A
Sbjct: 21 AARAGQDDEVRILMANGADVNAHDDQGSTPLHLAAWIGHPEIVEVLLKHGADVNARDTDG 80
Query: 254 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 313
LH+A +++VE+LLK+GA + A LH+A + +++VE+LLKHGA +
Sbjct: 81 WTPLHLAADNGHLEIVEVLLKYGADVNAQDAYGLTPLHLAADRGHLEIVEVLLKHGADVN 140
Query: 314 ATTEVREPMLHIACKKNRIKVVELLLK 340
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 81.6 bits (200), Expect = 3e-15, Method: Composition-based stats.
Identities = 50/122 (40%), Positives = 66/122 (54%), Gaps = 2/122 (1%)
Query: 1256 DQGFTPLHHSAQQGHSTIVALLLDRGASPNATNK-GFTPLHHSAQQGHSTIVALLLDRGA 1314
DQG TPLH +A GH IV +LL GA NA + G+TPLH +A GH IV +LL GA
Sbjct: 45 DQGSTPLHLAAWIGHPEIVEVLLKHGADVNARDTDGWTPLHLAADNGHLEIVEVLLKYGA 104
Query: 1315 SPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVA 1374
NA + G TPLH+A G + + +LL A+V+ G T S G+ +
Sbjct: 105 DVNAQD-AYGLTPLHLAADRGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAE 163
Query: 1375 LL 1376
+L
Sbjct: 164 IL 165
Score = 77.0 bits (188), Expect = 7e-14, Method: Composition-based stats.
Identities = 54/169 (31%), Positives = 77/169 (45%), Gaps = 25/169 (14%)
Query: 1142 SASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKG 1201
+A G D +L+ +GADV+ G TPLHL A + E+LLK+ A V+ G
Sbjct: 21 AARAGQDDEVRILMANGADVNAHDDQGSTPLHLAAWIGHPEIVEVLLKHGADVNARDTDG 80
Query: 1202 FTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRXXXXXXXXXXXXXXYTNTTDQGFTP 1261
+TPLH+A G + + +LL A+V + G TP
Sbjct: 81 WTPLHLAADNGHLEIVEVLLKYGADVNAQDAY------------------------GLTP 116
Query: 1262 LHHSAQQGHSTIVALLLDRGASPNATNK-GFTPLHHSAQQGHSTIVALL 1309
LH +A +GH IV +LL GA NA +K G T S G+ + +L
Sbjct: 117 LHLAADRGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 75.9 bits (185), Expect = 2e-13, Method: Composition-based stats.
Identities = 44/138 (31%), Positives = 73/138 (52%)
Query: 236 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 295
V +L+ +GA + A + LH+A ++VE+LLKHGA + A LH+A
Sbjct: 30 VRILMANGADVNAHDDQGSTPLHLAAWIGHPEIVEVLLKHGADVNARDTDGWTPLHLAAD 89
Query: 296 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 355
+++VE+LLK+GA + A LH+A + +++VE+LLKHGA + A + +
Sbjct: 90 NGHLEIVEVLLKYGADVNAQDAYGLTPLHLAADRGHLEIVEVLLKHGADVNAQDKFGKTA 149
Query: 356 LHIACKKNRIKVVELLLK 373
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 75.9 bits (185), Expect = 2e-13, Method: Composition-based stats.
Identities = 44/138 (31%), Positives = 73/138 (52%)
Query: 269 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 328
V +L+ +GA + A + LH+A ++VE+LLKHGA + A LH+A
Sbjct: 30 VRILMANGADVNAHDDQGSTPLHLAAWIGHPEIVEVLLKHGADVNARDTDGWTPLHLAAD 89
Query: 329 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 388
+++VE+LLK+GA + A LH+A + +++VE+LLKHGA + A + +
Sbjct: 90 NGHLEIVEVLLKYGADVNAQDAYGLTPLHLAADRGHLEIVEVLLKHGADVNAQDKFGKTA 149
Query: 389 LHIACKKNRIKVVELLLK 406
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 75.9 bits (185), Expect = 2e-13, Method: Composition-based stats.
Identities = 44/138 (31%), Positives = 73/138 (52%)
Query: 302 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 361
V +L+ +GA + A + LH+A ++VE+LLKHGA + A LH+A
Sbjct: 30 VRILMANGADVNAHDDQGSTPLHLAAWIGHPEIVEVLLKHGADVNARDTDGWTPLHLAAD 89
Query: 362 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 421
+++VE+LLK+GA + A LH+A + +++VE+LLKHGA + A + +
Sbjct: 90 NGHLEIVEVLLKYGADVNAQDAYGLTPLHLAADRGHLEIVEVLLKHGADVNAQDKFGKTA 149
Query: 422 LHIACKKNRIKVVELLLK 439
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 75.9 bits (185), Expect = 2e-13, Method: Composition-based stats.
Identities = 44/138 (31%), Positives = 73/138 (52%)
Query: 335 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 394
V +L+ +GA + A + LH+A ++VE+LLKHGA + A LH+A
Sbjct: 30 VRILMANGADVNAHDDQGSTPLHLAAWIGHPEIVEVLLKHGADVNARDTDGWTPLHLAAD 89
Query: 395 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 454
+++VE+LLK+GA + A LH+A + +++VE+LLKHGA + A + +
Sbjct: 90 NGHLEIVEVLLKYGADVNAQDAYGLTPLHLAADRGHLEIVEVLLKHGADVNAQDKFGKTA 149
Query: 455 LHIACKKNRIKVVELLLK 472
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 75.9 bits (185), Expect = 2e-13, Method: Composition-based stats.
Identities = 44/138 (31%), Positives = 73/138 (52%)
Query: 368 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 427
V +L+ +GA + A + LH+A ++VE+LLKHGA + A LH+A
Sbjct: 30 VRILMANGADVNAHDDQGSTPLHLAAWIGHPEIVEVLLKHGADVNARDTDGWTPLHLAAD 89
Query: 428 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 487
+++VE+LLK+GA + A LH+A + +++VE+LLKHGA + A + +
Sbjct: 90 NGHLEIVEVLLKYGADVNAQDAYGLTPLHLAADRGHLEIVEVLLKHGADVNAQDKFGKTA 149
Query: 488 LHIACKKNRIKVVELLLK 505
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 75.9 bits (185), Expect = 2e-13, Method: Composition-based stats.
Identities = 44/138 (31%), Positives = 73/138 (52%)
Query: 401 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 460
V +L+ +GA + A + LH+A ++VE+LLKHGA + A LH+A
Sbjct: 30 VRILMANGADVNAHDDQGSTPLHLAAWIGHPEIVEVLLKHGADVNARDTDGWTPLHLAAD 89
Query: 461 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 520
+++VE+LLK+GA + A LH+A + +++VE+LLKHGA + A + +
Sbjct: 90 NGHLEIVEVLLKYGADVNAQDAYGLTPLHLAADRGHLEIVEVLLKHGADVNAQDKFGKTA 149
Query: 521 LHIACKKNRIKVVELLLK 538
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 75.9 bits (185), Expect = 2e-13, Method: Composition-based stats.
Identities = 44/138 (31%), Positives = 73/138 (52%)
Query: 434 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 493
V +L+ +GA + A + LH+A ++VE+LLKHGA + A LH+A
Sbjct: 30 VRILMANGADVNAHDDQGSTPLHLAAWIGHPEIVEVLLKHGADVNARDTDGWTPLHLAAD 89
Query: 494 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 553
+++VE+LLK+GA + A LH+A + +++VE+LLKHGA + A + +
Sbjct: 90 NGHLEIVEVLLKYGADVNAQDAYGLTPLHLAADRGHLEIVEVLLKHGADVNAQDKFGKTA 149
Query: 554 LHIACKKNRIKVVELLLK 571
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 75.9 bits (185), Expect = 2e-13, Method: Composition-based stats.
Identities = 44/138 (31%), Positives = 73/138 (52%)
Query: 467 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 526
V +L+ +GA + A + LH+A ++VE+LLKHGA + A LH+A
Sbjct: 30 VRILMANGADVNAHDDQGSTPLHLAAWIGHPEIVEVLLKHGADVNARDTDGWTPLHLAAD 89
Query: 527 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 586
+++VE+LLK+GA + A LH+A + +++VE+LLKHGA + A + +
Sbjct: 90 NGHLEIVEVLLKYGADVNAQDAYGLTPLHLAADRGHLEIVEVLLKHGADVNAQDKFGKTA 149
Query: 587 LHIACKKNRIKVVELLLK 604
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 75.9 bits (185), Expect = 2e-13, Method: Composition-based stats.
Identities = 44/138 (31%), Positives = 73/138 (52%)
Query: 500 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 559
V +L+ +GA + A + LH+A ++VE+LLKHGA + A LH+A
Sbjct: 30 VRILMANGADVNAHDDQGSTPLHLAAWIGHPEIVEVLLKHGADVNARDTDGWTPLHLAAD 89
Query: 560 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 619
+++VE+LLK+GA + A LH+A + +++VE+LLKHGA + A + +
Sbjct: 90 NGHLEIVEVLLKYGADVNAQDAYGLTPLHLAADRGHLEIVEVLLKHGADVNAQDKFGKTA 149
Query: 620 LHIACKKNRIKVVELLLK 637
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 75.9 bits (185), Expect = 2e-13, Method: Composition-based stats.
Identities = 44/138 (31%), Positives = 73/138 (52%)
Query: 533 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 592
V +L+ +GA + A + LH+A ++VE+LLKHGA + A LH+A
Sbjct: 30 VRILMANGADVNAHDDQGSTPLHLAAWIGHPEIVEVLLKHGADVNARDTDGWTPLHLAAD 89
Query: 593 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 652
+++VE+LLK+GA + A LH+A + +++VE+LLKHGA + A + +
Sbjct: 90 NGHLEIVEVLLKYGADVNAQDAYGLTPLHLAADRGHLEIVEVLLKHGADVNAQDKFGKTA 149
Query: 653 LHIACKKNRIKVVELLLK 670
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 75.9 bits (185), Expect = 2e-13, Method: Composition-based stats.
Identities = 44/138 (31%), Positives = 73/138 (52%)
Query: 566 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 625
V +L+ +GA + A + LH+A ++VE+LLKHGA + A LH+A
Sbjct: 30 VRILMANGADVNAHDDQGSTPLHLAAWIGHPEIVEVLLKHGADVNARDTDGWTPLHLAAD 89
Query: 626 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 685
+++VE+LLK+GA + A LH+A + +++VE+LLKHGA + A + +
Sbjct: 90 NGHLEIVEVLLKYGADVNAQDAYGLTPLHLAADRGHLEIVEVLLKHGADVNAQDKFGKTA 149
Query: 686 LHIACKKNRIKVVELLLK 703
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 75.9 bits (185), Expect = 2e-13, Method: Composition-based stats.
Identities = 44/138 (31%), Positives = 73/138 (52%)
Query: 599 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 658
V +L+ +GA + A + LH+A ++VE+LLKHGA + A LH+A
Sbjct: 30 VRILMANGADVNAHDDQGSTPLHLAAWIGHPEIVEVLLKHGADVNARDTDGWTPLHLAAD 89
Query: 659 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 718
+++VE+LLK+GA + A LH+A + +++VE+LLKHGA + A + +
Sbjct: 90 NGHLEIVEVLLKYGADVNAQDAYGLTPLHLAADRGHLEIVEVLLKHGADVNAQDKFGKTA 149
Query: 719 LHIACKKNRIKVVELLLK 736
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 75.9 bits (185), Expect = 2e-13, Method: Composition-based stats.
Identities = 44/138 (31%), Positives = 73/138 (52%)
Query: 632 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 691
V +L+ +GA + A + LH+A ++VE+LLKHGA + A LH+A
Sbjct: 30 VRILMANGADVNAHDDQGSTPLHLAAWIGHPEIVEVLLKHGADVNARDTDGWTPLHLAAD 89
Query: 692 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 751
+++VE+LLK+GA + A LH+A + +++VE+LLKHGA + A + +
Sbjct: 90 NGHLEIVEVLLKYGADVNAQDAYGLTPLHLAADRGHLEIVEVLLKHGADVNAQDKFGKTA 149
Query: 752 LHIACKKNRIKVVELLLK 769
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 75.9 bits (185), Expect = 2e-13, Method: Composition-based stats.
Identities = 44/138 (31%), Positives = 73/138 (52%)
Query: 665 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 724
V +L+ +GA + A + LH+A ++VE+LLKHGA + A LH+A
Sbjct: 30 VRILMANGADVNAHDDQGSTPLHLAAWIGHPEIVEVLLKHGADVNARDTDGWTPLHLAAD 89
Query: 725 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 784
+++VE+LLK+GA + A LH+A + +++VE+LLKHGA + A + +
Sbjct: 90 NGHLEIVEVLLKYGADVNAQDAYGLTPLHLAADRGHLEIVEVLLKHGADVNAQDKFGKTA 149
Query: 785 LHIACKKNRIKVVELLLK 802
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 75.9 bits (185), Expect = 2e-13, Method: Composition-based stats.
Identities = 44/138 (31%), Positives = 73/138 (52%)
Query: 698 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 757
V +L+ +GA + A + LH+A ++VE+LLKHGA + A LH+A
Sbjct: 30 VRILMANGADVNAHDDQGSTPLHLAAWIGHPEIVEVLLKHGADVNARDTDGWTPLHLAAD 89
Query: 758 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 817
+++VE+LLK+GA + A LH+A + +++VE+LLKHGA + A + +
Sbjct: 90 NGHLEIVEVLLKYGADVNAQDAYGLTPLHLAADRGHLEIVEVLLKHGADVNAQDKFGKTA 149
Query: 818 LHIACKKNRIKVVELLLK 835
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 75.9 bits (185), Expect = 2e-13, Method: Composition-based stats.
Identities = 44/138 (31%), Positives = 73/138 (52%)
Query: 731 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 790
V +L+ +GA + A + LH+A ++VE+LLKHGA + A LH+A
Sbjct: 30 VRILMANGADVNAHDDQGSTPLHLAAWIGHPEIVEVLLKHGADVNARDTDGWTPLHLAAD 89
Query: 791 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 850
+++VE+LLK+GA + A LH+A + +++VE+LLKHGA + A + +
Sbjct: 90 NGHLEIVEVLLKYGADVNAQDAYGLTPLHLAADRGHLEIVEVLLKHGADVNAQDKFGKTA 149
Query: 851 LHIACKKNRIKVVELLLK 868
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 75.9 bits (185), Expect = 2e-13, Method: Composition-based stats.
Identities = 44/138 (31%), Positives = 73/138 (52%)
Query: 764 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 823
V +L+ +GA + A + LH+A ++VE+LLKHGA + A LH+A
Sbjct: 30 VRILMANGADVNAHDDQGSTPLHLAAWIGHPEIVEVLLKHGADVNARDTDGWTPLHLAAD 89
Query: 824 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 883
+++VE+LLK+GA + A LH+A + +++VE+LLKHGA + A + +
Sbjct: 90 NGHLEIVEVLLKYGADVNAQDAYGLTPLHLAADRGHLEIVEVLLKHGADVNAQDKFGKTA 149
Query: 884 LHIACKKNRIKVVELLLK 901
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 75.9 bits (185), Expect = 2e-13, Method: Composition-based stats.
Identities = 44/138 (31%), Positives = 73/138 (52%)
Query: 797 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 856
V +L+ +GA + A + LH+A ++VE+LLKHGA + A LH+A
Sbjct: 30 VRILMANGADVNAHDDQGSTPLHLAAWIGHPEIVEVLLKHGADVNARDTDGWTPLHLAAD 89
Query: 857 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 916
+++VE+LLK+GA + A LH+A + +++VE+LLKHGA + A + +
Sbjct: 90 NGHLEIVEVLLKYGADVNAQDAYGLTPLHLAADRGHLEIVEVLLKHGADVNAQDKFGKTA 149
Query: 917 LHIACKKNRIKVVELLLK 934
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 72.8 bits (177), Expect = 1e-12, Method: Composition-based stats.
Identities = 42/137 (30%), Positives = 73/137 (53%)
Query: 830 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 889
V +L+ +GA + A + LH+A ++VE+LLKHGA + A LH+A
Sbjct: 30 VRILMANGADVNAHDDQGSTPLHLAAWIGHPEIVEVLLKHGADVNARDTDGWTPLHLAAD 89
Query: 890 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASSHVVSCYSNVK 949
+++VE+LLK+GA + A LH+A + +++VE+LLKHGA + +
Sbjct: 90 NGHLEIVEVLLKYGADVNAQDAYGLTPLHLAADRGHLEIVEVLLKHGADVNAQDKFGKTA 149
Query: 950 VHVSLNKIQDVSSSILR 966
+S++ + + IL+
Sbjct: 150 FDISIDNGNEDLAEILQ 166
Score = 68.2 bits (165), Expect = 3e-11, Method: Composition-based stats.
Identities = 45/153 (29%), Positives = 82/153 (53%), Gaps = 24/153 (15%)
Query: 40 AAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISSKTKVR 99
AA+ G+ + V +L++ GA+++ G T LH AA GH ++E+LL+ GA ++++
Sbjct: 21 AARAGQDDEVRILMANGADVNAHDDQGSTPLHLAAWIGHPEIVEVLLKHGADVNAR-DTD 79
Query: 100 GFYILR----SGHEAVIEMLLEQGAPISSKTKVAAVLLENGASLTSTTKKGFTPLHLTGK 155
G+ L +GH ++E+LL+ GA ++++ G TPLHL
Sbjct: 80 GWTPLHLAADNGHLEIVEVLLKYGADVNAQDAY-----------------GLTPLHLAAD 122
Query: 156 YGHIKVAKLLLQKDAPVDFQGK--APVDDVTVD 186
GH+++ ++LL+ A V+ Q K D+++D
Sbjct: 123 RGHLEIVEVLLKHGADVNAQDKFGKTAFDISID 155
Score = 65.9 bits (159), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/104 (35%), Positives = 62/104 (59%), Gaps = 5/104 (4%)
Query: 28 SHFQHNITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLE 87
+H TPLH+AA G +V +LL GA+++ + DG T LH AA +GH ++E+LL+
Sbjct: 42 AHDDQGSTPLHLAAWIGHPEIVEVLLKHGADVNARDTDGWTPLHLAADNGHLEIVEVLLK 101
Query: 88 QGAPISSKTKVRGFYILR----SGHEAVIEMLLEQGAPISSKTK 127
GA ++++ G L GH ++E+LL+ GA ++++ K
Sbjct: 102 YGADVNAQ-DAYGLTPLHLAADRGHLEIVEVLLKHGADVNAQDK 144
Score = 62.4 bits (150), Expect = 2e-09, Method: Composition-based stats.
Identities = 51/180 (28%), Positives = 83/180 (46%), Gaps = 44/180 (24%)
Query: 896 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASSHVVSCYSNVKVHVSLN 955
V +L+ +GA + A + LH+A ++VE+LLKHGA
Sbjct: 30 VRILMANGADVNAHDDQGSTPLHLAAWIGHPEIVEVLLKHGA------------------ 71
Query: 956 KIQDVSSSILRLATCDVLPQCETRLNFSNLRVREQQTPLHIASRLGNVDIVMLLLQHGAA 1015
DV N R + TPLH+A+ G+++IV +LL++GA
Sbjct: 72 ---------------DV-----------NARDTDGWTPLHLAADNGHLEIVEVLLKYGAD 105
Query: 1016 VDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLL 1075
V++ T LH+AA G E+ VLL++GA + + K G T ++ G+ +A++L
Sbjct: 106 VNAQDAYGLTPLHLAADRGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 39.3 bits (90), Expect = 0.015, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 34/54 (62%)
Query: 32 HNITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEML 85
+ +TPLH+AA G +V +LL GA+++ + + G TA + +G+E + E+L
Sbjct: 112 YGLTPLHLAADRGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165
>pdb|4GMR|A Chain A, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or266.
pdb|4GMR|B Chain B, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or266
Length = 169
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 80/131 (61%), Gaps = 3/131 (2%)
Query: 1253 NTTD-QGFTPLHHSAQQGHSTIVALLLDRGASPNATN-KGFTPLHHSAQQGHSTIVALLL 1310
N +D G TPLH +A+ GH +V LLL +GA PNA + G TPLH +A+ GH +V LLL
Sbjct: 31 NASDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGHKEVVKLLL 90
Query: 1311 DRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHS 1370
+GA PNA + + G TPLH+A G + +LLL Q A+ + + G TPL + + G+
Sbjct: 91 SQGADPNAKD-SDGKTPLHLAAENGHKEVVKLLLSQGADPNTSDSDGRTPLDLAREHGNE 149
Query: 1371 TIVALLLDRGA 1381
+V LL +G
Sbjct: 150 EVVKLLEKQGG 160
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 77/124 (62%), Gaps = 2/124 (1%)
Query: 1265 SAQQGHSTIVALLLDRGASPNATN-KGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTR 1323
+A+ G+ V LL+ GA NA++ G TPLH +A+ GH +V LLL +GA PNA + +
Sbjct: 11 AAENGNKDRVKDLLENGADVNASDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKD-SD 69
Query: 1324 GFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGASP 1383
G TPLH+A G + +LLL Q A+ + G TPLH +A+ GH +V LLL +GA P
Sbjct: 70 GKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGHKEVVKLLLSQGADP 129
Query: 1384 NATN 1387
N ++
Sbjct: 130 NTSD 133
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 88/160 (55%), Gaps = 13/160 (8%)
Query: 1030 AAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNG 1089
AA+ G ++ LLENGA + ++ G TPLHL + GH +V KLLL + A + + +G
Sbjct: 11 AAENGNKDRVKDLLENGADVNASDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDG 70
Query: 1090 VTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHAD 1149
TPLH+A+ H+ V LLL +GA PNA+ G TPLHL+A GH +
Sbjct: 71 KTPLHLAAENGHKEVVKLLLSQGAD-------------PNAKDSDGKTPLHLAAENGHKE 117
Query: 1150 MSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLK 1189
+ +LL GAD + + +G TPL L + V +LL K
Sbjct: 118 VVKLLLSQGADPNTSDSDGRTPLDLAREHGNEEVVKLLEK 157
Score = 96.7 bits (239), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 87/163 (53%), Gaps = 13/163 (7%)
Query: 997 ASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKG 1056
A+ GN D V LL++GA V+++ D T LH+AA+ G +EV +LL GA + G
Sbjct: 11 AAENGNKDRVKDLLENGADVNASDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDG 70
Query: 1057 FTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMD 1116
TPLHL + GH +V KLLL + A + + +G TPLH+A+ H+ V LLL +GA
Sbjct: 71 KTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGHKEVVKLLLSQGAD-- 128
Query: 1117 IATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGA 1159
PN G TPL L+ G+ ++ +L + G
Sbjct: 129 -----------PNTSDSDGRTPLDLAREHGNEEVVKLLEKQGG 160
Score = 86.7 bits (213), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 76/133 (57%)
Query: 984 NLRVREQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLL 1043
N + +TPLH+A+ G+ ++V LLL GA ++ D T LH+AA+ G +EV +LL
Sbjct: 31 NASDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGHKEVVKLLL 90
Query: 1044 ENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQN 1103
GA + G TPLHL + GH +V KLLL + A + +G TPL +A + ++
Sbjct: 91 SQGADPNAKDSDGKTPLHLAAENGHKEVVKLLLSQGADPNTSDSDGRTPLDLAREHGNEE 150
Query: 1104 VALLLLEKGASMD 1116
V LL ++G ++
Sbjct: 151 VVKLLEKQGGWLE 163
Score = 84.7 bits (208), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 78/171 (45%), Gaps = 26/171 (15%)
Query: 1113 ASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPL 1172
+ D LLE GA NA G TPLHL+A GH ++ +LL GAD + +G TPL
Sbjct: 15 GNKDRVKDLLENGADVNASDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPL 74
Query: 1173 HLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKN 1232
HL A+ V +LLL A + G TPLH+A G + +LLL Q A+
Sbjct: 75 HLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGHKEVVKLLLSQGAD------ 128
Query: 1233 FPSRXXXXXXXXXXXXXXYTNTTD-QGFTPLHHSAQQGHSTIVALLLDRGA 1282
NT+D G TPL + + G+ +V LL +G
Sbjct: 129 -------------------PNTSDSDGRTPLDLAREHGNEEVVKLLEKQGG 160
Score = 83.6 bits (205), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 73/140 (52%)
Query: 174 FQGKAPVDDVTVDYLTALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRI 233
+ A V+ D T LH+AA GH V K LL + ADPNA+ +G TPLH+A +
Sbjct: 24 LENGADVNASDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGHK 83
Query: 234 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 293
+VV+LLL GA A + LH+A + +VV+LLL GA + L +A
Sbjct: 84 EVVKLLLSQGADPNAKDSDGKTPLHLAAENGHKEVVKLLLSQGADPNTSDSDGRTPLDLA 143
Query: 294 CKKNRIKVVELLLKHGASIE 313
+ +VV+LL K G +E
Sbjct: 144 REHGNEEVVKLLEKQGGWLE 163
Score = 80.1 bits (196), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 77/153 (50%)
Query: 194 AAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVR 253
AA G+ K LL+ AD NA +G TPLH+A + +VV+LLL GA A
Sbjct: 11 AAENGNKDRVKDLLENGADVNASDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDG 70
Query: 254 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 313
+ LH+A + +VV+LLL GA A + LH+A + +VV+LLL GA
Sbjct: 71 KTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGHKEVVKLLLSQGADPN 130
Query: 314 ATTEVREPMLHIACKKNRIKVVELLLKHGASIE 346
+ L +A + +VV+LL K G +E
Sbjct: 131 TSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLE 163
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 91/211 (43%), Gaps = 61/211 (28%)
Query: 40 AAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISSKT--- 96
AA+ G + V LL GA+++ DG T LH AA +GH+ V+++LL QGA ++K
Sbjct: 11 AAENGNKDRVKDLLENGADVNASDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDG 70
Query: 97 KVRGFYILRSGHEAVIEMLLEQGAPISSKTKVAAVLLENGASLTSTTKKGFTPLHLTGKY 156
K +GH+ V+++LL QGA ++K G TPLHL +
Sbjct: 71 KTPLHLAAENGHKEVVKLLLSQGADPNAK-----------------DSDGKTPLHLAAEN 113
Query: 157 GHIKVAKLLLQKDAPVDFQGKAPVDDVTVDYLTALHVAAHCGHARVAKTLLDKKADPNAR 216
GH +V KLLL + A DPN
Sbjct: 114 GHKEVVKLLLSQGA-----------------------------------------DPNTS 132
Query: 217 ALNGFTPLHIACKKNRIKVVELLLKHGASIE 247
+G TPL +A + +VV+LL K G +E
Sbjct: 133 DSDGRTPLDLAREHGNEEVVKLLEKQGGWLE 163
Score = 76.6 bits (187), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 74/134 (55%), Gaps = 20/134 (14%)
Query: 35 TPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISS 94
TPLH+AA+ G +V LLLS+GA+ + K DG T LH AA +GH+ V+++LL QGA ++
Sbjct: 39 TPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGHKEVVKLLLSQGADPNA 98
Query: 95 KT---KVRGFYILRSGHEAVIEMLLEQGAPISSKTKVAAVLLENGASLTSTTKKGFTPLH 151
K K +GH+ V+++LL Q GA ++ G TPL
Sbjct: 99 KDSDGKTPLHLAAENGHKEVVKLLLSQ-----------------GADPNTSDSDGRTPLD 141
Query: 152 LTGKYGHIKVAKLL 165
L ++G+ +V KLL
Sbjct: 142 LAREHGNEEVVKLL 155
Score = 70.9 bits (172), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 83/163 (50%), Gaps = 1/163 (0%)
Query: 250 TEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG 309
+E+ + ++ A N+ +V +LL ++GA + A+ + LH+A + +VV+LLL G
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLL-ENGADVNASDSDGKTPLHLAAENGHKEVVKLLLSQG 60
Query: 310 ASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVE 369
A A + LH+A + +VV+LLL GA A + LH+A + +VV+
Sbjct: 61 ADPNAKDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGHKEVVK 120
Query: 370 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 412
LLL GA + L +A + +VV+LL K G +E
Sbjct: 121 LLLSQGADPNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLE 163
Score = 70.9 bits (172), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 83/163 (50%), Gaps = 1/163 (0%)
Query: 283 TEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG 342
+E+ + ++ A N+ +V +LL ++GA + A+ + LH+A + +VV+LLL G
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLL-ENGADVNASDSDGKTPLHLAAENGHKEVVKLLLSQG 60
Query: 343 ASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVE 402
A A + LH+A + +VV+LLL GA A + LH+A + +VV+
Sbjct: 61 ADPNAKDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGHKEVVK 120
Query: 403 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 445
LLL GA + L +A + +VV+LL K G +E
Sbjct: 121 LLLSQGADPNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLE 163
Score = 70.9 bits (172), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 83/163 (50%), Gaps = 1/163 (0%)
Query: 316 TEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG 375
+E+ + ++ A N+ +V +LL ++GA + A+ + LH+A + +VV+LLL G
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLL-ENGADVNASDSDGKTPLHLAAENGHKEVVKLLLSQG 60
Query: 376 ASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVE 435
A A + LH+A + +VV+LLL GA A + LH+A + +VV+
Sbjct: 61 ADPNAKDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGHKEVVK 120
Query: 436 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 478
LLL GA + L +A + +VV+LL K G +E
Sbjct: 121 LLLSQGADPNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLE 163
Score = 70.9 bits (172), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 83/163 (50%), Gaps = 1/163 (0%)
Query: 349 TEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG 408
+E+ + ++ A N+ +V +LL ++GA + A+ + LH+A + +VV+LLL G
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLL-ENGADVNASDSDGKTPLHLAAENGHKEVVKLLLSQG 60
Query: 409 ASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVE 468
A A + LH+A + +VV+LLL GA A + LH+A + +VV+
Sbjct: 61 ADPNAKDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGHKEVVK 120
Query: 469 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 511
LLL GA + L +A + +VV+LL K G +E
Sbjct: 121 LLLSQGADPNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLE 163
Score = 70.9 bits (172), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 83/163 (50%), Gaps = 1/163 (0%)
Query: 382 TEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG 441
+E+ + ++ A N+ +V +LL ++GA + A+ + LH+A + +VV+LLL G
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLL-ENGADVNASDSDGKTPLHLAAENGHKEVVKLLLSQG 60
Query: 442 ASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVE 501
A A + LH+A + +VV+LLL GA A + LH+A + +VV+
Sbjct: 61 ADPNAKDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGHKEVVK 120
Query: 502 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 544
LLL GA + L +A + +VV+LL K G +E
Sbjct: 121 LLLSQGADPNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLE 163
Score = 70.9 bits (172), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 83/163 (50%), Gaps = 1/163 (0%)
Query: 415 TEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG 474
+E+ + ++ A N+ +V +LL ++GA + A+ + LH+A + +VV+LLL G
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLL-ENGADVNASDSDGKTPLHLAAENGHKEVVKLLLSQG 60
Query: 475 ASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVE 534
A A + LH+A + +VV+LLL GA A + LH+A + +VV+
Sbjct: 61 ADPNAKDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGHKEVVK 120
Query: 535 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 577
LLL GA + L +A + +VV+LL K G +E
Sbjct: 121 LLLSQGADPNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLE 163
Score = 70.9 bits (172), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 83/163 (50%), Gaps = 1/163 (0%)
Query: 448 TEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG 507
+E+ + ++ A N+ +V +LL ++GA + A+ + LH+A + +VV+LLL G
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLL-ENGADVNASDSDGKTPLHLAAENGHKEVVKLLLSQG 60
Query: 508 ASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVE 567
A A + LH+A + +VV+LLL GA A + LH+A + +VV+
Sbjct: 61 ADPNAKDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGHKEVVK 120
Query: 568 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 610
LLL GA + L +A + +VV+LL K G +E
Sbjct: 121 LLLSQGADPNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLE 163
Score = 70.9 bits (172), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 83/163 (50%), Gaps = 1/163 (0%)
Query: 481 TEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG 540
+E+ + ++ A N+ +V +LL ++GA + A+ + LH+A + +VV+LLL G
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLL-ENGADVNASDSDGKTPLHLAAENGHKEVVKLLLSQG 60
Query: 541 ASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVE 600
A A + LH+A + +VV+LLL GA A + LH+A + +VV+
Sbjct: 61 ADPNAKDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGHKEVVK 120
Query: 601 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 643
LLL GA + L +A + +VV+LL K G +E
Sbjct: 121 LLLSQGADPNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLE 163
Score = 70.9 bits (172), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 83/163 (50%), Gaps = 1/163 (0%)
Query: 514 TEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG 573
+E+ + ++ A N+ +V +LL ++GA + A+ + LH+A + +VV+LLL G
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLL-ENGADVNASDSDGKTPLHLAAENGHKEVVKLLLSQG 60
Query: 574 ASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVE 633
A A + LH+A + +VV+LLL GA A + LH+A + +VV+
Sbjct: 61 ADPNAKDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGHKEVVK 120
Query: 634 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 676
LLL GA + L +A + +VV+LL K G +E
Sbjct: 121 LLLSQGADPNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLE 163
Score = 70.9 bits (172), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 83/163 (50%), Gaps = 1/163 (0%)
Query: 547 TEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG 606
+E+ + ++ A N+ +V +LL ++GA + A+ + LH+A + +VV+LLL G
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLL-ENGADVNASDSDGKTPLHLAAENGHKEVVKLLLSQG 60
Query: 607 ASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVE 666
A A + LH+A + +VV+LLL GA A + LH+A + +VV+
Sbjct: 61 ADPNAKDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGHKEVVK 120
Query: 667 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 709
LLL GA + L +A + +VV+LL K G +E
Sbjct: 121 LLLSQGADPNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLE 163
Score = 70.9 bits (172), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 83/163 (50%), Gaps = 1/163 (0%)
Query: 580 TEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG 639
+E+ + ++ A N+ +V +LL ++GA + A+ + LH+A + +VV+LLL G
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLL-ENGADVNASDSDGKTPLHLAAENGHKEVVKLLLSQG 60
Query: 640 ASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVE 699
A A + LH+A + +VV+LLL GA A + LH+A + +VV+
Sbjct: 61 ADPNAKDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGHKEVVK 120
Query: 700 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 742
LLL GA + L +A + +VV+LL K G +E
Sbjct: 121 LLLSQGADPNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLE 163
Score = 70.9 bits (172), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 83/163 (50%), Gaps = 1/163 (0%)
Query: 613 TEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG 672
+E+ + ++ A N+ +V +LL ++GA + A+ + LH+A + +VV+LLL G
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLL-ENGADVNASDSDGKTPLHLAAENGHKEVVKLLLSQG 60
Query: 673 ASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVE 732
A A + LH+A + +VV+LLL GA A + LH+A + +VV+
Sbjct: 61 ADPNAKDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGHKEVVK 120
Query: 733 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 775
LLL GA + L +A + +VV+LL K G +E
Sbjct: 121 LLLSQGADPNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLE 163
Score = 70.9 bits (172), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 83/163 (50%), Gaps = 1/163 (0%)
Query: 646 TEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG 705
+E+ + ++ A N+ +V +LL ++GA + A+ + LH+A + +VV+LLL G
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLL-ENGADVNASDSDGKTPLHLAAENGHKEVVKLLLSQG 60
Query: 706 ASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVE 765
A A + LH+A + +VV+LLL GA A + LH+A + +VV+
Sbjct: 61 ADPNAKDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGHKEVVK 120
Query: 766 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 808
LLL GA + L +A + +VV+LL K G +E
Sbjct: 121 LLLSQGADPNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLE 163
Score = 70.9 bits (172), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 83/163 (50%), Gaps = 1/163 (0%)
Query: 679 TEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG 738
+E+ + ++ A N+ +V +LL ++GA + A+ + LH+A + +VV+LLL G
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLL-ENGADVNASDSDGKTPLHLAAENGHKEVVKLLLSQG 60
Query: 739 ASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVE 798
A A + LH+A + +VV+LLL GA A + LH+A + +VV+
Sbjct: 61 ADPNAKDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGHKEVVK 120
Query: 799 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 841
LLL GA + L +A + +VV+LL K G +E
Sbjct: 121 LLLSQGADPNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLE 163
Score = 70.9 bits (172), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 83/163 (50%), Gaps = 1/163 (0%)
Query: 712 TEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG 771
+E+ + ++ A N+ +V +LL ++GA + A+ + LH+A + +VV+LLL G
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLL-ENGADVNASDSDGKTPLHLAAENGHKEVVKLLLSQG 60
Query: 772 ASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVE 831
A A + LH+A + +VV+LLL GA A + LH+A + +VV+
Sbjct: 61 ADPNAKDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGHKEVVK 120
Query: 832 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 874
LLL GA + L +A + +VV+LL K G +E
Sbjct: 121 LLLSQGADPNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLE 163
Score = 70.9 bits (172), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 83/163 (50%), Gaps = 1/163 (0%)
Query: 745 TEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG 804
+E+ + ++ A N+ +V +LL ++GA + A+ + LH+A + +VV+LLL G
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLL-ENGADVNASDSDGKTPLHLAAENGHKEVVKLLLSQG 60
Query: 805 ASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVE 864
A A + LH+A + +VV+LLL GA A + LH+A + +VV+
Sbjct: 61 ADPNAKDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGHKEVVK 120
Query: 865 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 907
LLL GA + L +A + +VV+LL K G +E
Sbjct: 121 LLLSQGADPNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLE 163
Score = 70.1 bits (170), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 76/150 (50%), Gaps = 3/150 (2%)
Query: 230 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 289
K+R+K LL++GA + A+ + LH+A + +VV+LLL GA A +
Sbjct: 17 KDRVKD---LLENGADVNASDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTP 73
Query: 290 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 349
LH+A + +VV+LLL GA A + LH+A + +VV+LLL GA +
Sbjct: 74 LHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGHKEVVKLLLSQGADPNTSD 133
Query: 350 EVREPMLHIACKKNRIKVVELLLKHGASIE 379
L +A + +VV+LL K G +E
Sbjct: 134 SDGRTPLDLAREHGNEEVVKLLEKQGGWLE 163
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 81/160 (50%), Gaps = 1/160 (0%)
Query: 778 TEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG 837
+E+ + ++ A N+ +V +LL ++GA + A+ + LH+A + +VV+LLL G
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLL-ENGADVNASDSDGKTPLHLAAENGHKEVVKLLLSQG 60
Query: 838 ASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVE 897
A A + LH+A + +VV+LLL GA A + LH+A + +VV+
Sbjct: 61 ADPNAKDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGHKEVVK 120
Query: 898 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 937
LLL GA + L +A + +VV+LL K G
Sbjct: 121 LLLSQGADPNTSDSDGRTPLDLAREHGNEEVVKLLEKQGG 160
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 91/206 (44%), Gaps = 45/206 (21%)
Query: 844 TEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG 903
+E+ + ++ A N+ +V +LL ++GA + A+ + LH+A + +VV+LLL G
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLL-ENGADVNASDSDGKTPLHLAAENGHKEVVKLLLSQG 60
Query: 904 ASIEATTEVREPMLHIACKKNRIKVVELLLKHGASSHVVSCYSNVKVHVSLNKIQDVSSS 963
A A + LH+A + +VV+LLL GA
Sbjct: 61 ADPNAKDSDGKTPLHLAAENGHKEVVKLLLSQGADP------------------------ 96
Query: 964 ILRLATCDVLPQCETRLNFSNLRVREQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDL 1023
N + + +TPLH+A+ G+ ++V LLL GA +++ D
Sbjct: 97 --------------------NAKDSDGKTPLHLAAENGHKEVVKLLLSQGADPNTSDSDG 136
Query: 1024 YTALHIAAKEGQEEVAAVLLENGASL 1049
T L +A + G EEV +L + G L
Sbjct: 137 RTPLDLAREHGNEEVVKLLEKQGGWL 162
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 35 TPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGA 90
TPLH+AA+ G +V LLLS+GA+ + DG T L A G+E V+++L +QG
Sbjct: 105 TPLHLAAENGHKEVVKLLLSQGADPNTSDSDGRTPLDLAREHGNEEVVKLLEKQGG 160
>pdb|4HQD|A Chain A, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or265.
pdb|4HQD|B Chain B, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or265
Length = 169
Score = 104 bits (259), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 82/131 (62%), Gaps = 3/131 (2%)
Query: 1253 NTTD-QGFTPLHHSAQQGHSTIVALLLDRGASPNATN-KGFTPLHHSAQQGHSTIVALLL 1310
N +D G TPLH++A++GH IV LL+ +GA NA + G TPLH++A++GH IV LL+
Sbjct: 31 NASDSDGRTPLHYAAKEGHKEIVKLLISKGADVNAKDSDGRTPLHYAAKEGHKEIVKLLI 90
Query: 1311 DRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHS 1370
+GA NA + + G TPLH A G + +LL+ + A+V+ + G TPL + + G+
Sbjct: 91 SKGADVNAKD-SDGRTPLHYAAKEGHKEIVKLLISKGADVNTSDSDGRTPLDLAREHGNE 149
Query: 1371 TIVALLLDRGA 1381
IV LL +G
Sbjct: 150 EIVKLLEKQGG 160
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 90/166 (54%), Gaps = 13/166 (7%)
Query: 1030 AAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNG 1089
AA+ G ++ L+ENGA + ++ G TPLH K GH ++ KLL+ K A V+ + +G
Sbjct: 11 AAENGNKDRVKDLIENGADVNASDSDGRTPLHYAAKEGHKEIVKLLISKGADVNAKDSDG 70
Query: 1090 VTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHAD 1149
TPLH A+ H+ + LL+ KGA + NA+ G TPLH +A EGH +
Sbjct: 71 RTPLHYAAKEGHKEIVKLLISKGADV-------------NAKDSDGRTPLHYAAKEGHKE 117
Query: 1150 MSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVD 1195
+ +L+ GADV+ + +G TPL L + + +LL K ++
Sbjct: 118 IVKLLISKGADVNTSDSDGRTPLDLAREHGNEEIVKLLEKQGGWLE 163
Score = 100 bits (248), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 79/124 (63%), Gaps = 2/124 (1%)
Query: 1265 SAQQGHSTIVALLLDRGASPNATN-KGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTR 1323
+A+ G+ V L++ GA NA++ G TPLH++A++GH IV LL+ +GA NA + +
Sbjct: 11 AAENGNKDRVKDLIENGADVNASDSDGRTPLHYAAKEGHKEIVKLLISKGADVNAKD-SD 69
Query: 1324 GFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGASP 1383
G TPLH A G + +LL+ + A+V+ G TPLH++A++GH IV LL+ +GA
Sbjct: 70 GRTPLHYAAKEGHKEIVKLLISKGADVNAKDSDGRTPLHYAAKEGHKEIVKLLISKGADV 129
Query: 1384 NATN 1387
N ++
Sbjct: 130 NTSD 133
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 87/163 (53%), Gaps = 13/163 (7%)
Query: 997 ASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKG 1056
A+ GN D V L+++GA V+++ D T LH AAKEG +E+ +L+ GA + + G
Sbjct: 11 AAENGNKDRVKDLIENGADVNASDSDGRTPLHYAAKEGHKEIVKLLISKGADVNAKDSDG 70
Query: 1057 FTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMD 1116
TPLH K GH ++ KLL+ K A V+ + +G TPLH A+ H+ + LL+ KGA +
Sbjct: 71 RTPLHYAAKEGHKEIVKLLISKGADVNAKDSDGRTPLHYAAKEGHKEIVKLLISKGADV- 129
Query: 1117 IATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGA 1159
N G TPL L+ G+ ++ +L + G
Sbjct: 130 ------------NTSDSDGRTPLDLAREHGNEEIVKLLEKQGG 160
Score = 93.6 bits (231), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 78/133 (58%)
Query: 984 NLRVREQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLL 1043
N + +TPLH A++ G+ +IV LL+ GA V++ D T LH AAKEG +E+ +L+
Sbjct: 31 NASDSDGRTPLHYAAKEGHKEIVKLLISKGADVNAKDSDGRTPLHYAAKEGHKEIVKLLI 90
Query: 1044 ENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQN 1103
GA + + G TPLH K GH ++ KLL+ K A V+ +G TPL +A + ++
Sbjct: 91 SKGADVNAKDSDGRTPLHYAAKEGHKEIVKLLISKGADVNTSDSDGRTPLDLAREHGNEE 150
Query: 1104 VALLLLEKGASMD 1116
+ LL ++G ++
Sbjct: 151 IVKLLEKQGGWLE 163
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 80/171 (46%), Gaps = 26/171 (15%)
Query: 1113 ASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPL 1172
+ D L+E GA NA G TPLH +A EGH ++ +L+ GADV+ +G TPL
Sbjct: 15 GNKDRVKDLIENGADVNASDSDGRTPLHYAAKEGHKEIVKLLISKGADVNAKDSDGRTPL 74
Query: 1173 HLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKN 1232
H A+E + +LL+ A V+ G TPLH A G + +LL+ + A+V
Sbjct: 75 HYAAKEGHKEIVKLLISKGADVNAKDSDGRTPLHYAAKEGHKEIVKLLISKGADV----- 129
Query: 1233 FPSRXXXXXXXXXXXXXXYTNTTD-QGFTPLHHSAQQGHSTIVALLLDRGA 1282
NT+D G TPL + + G+ IV LL +G
Sbjct: 130 --------------------NTSDSDGRTPLDLAREHGNEEIVKLLEKQGG 160
Score = 80.1 bits (196), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 86/155 (55%), Gaps = 4/155 (2%)
Query: 194 AAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEA-TTEV 252
AA G+ K L++ AD NA +G TPLH A K+ ++V+LL+ GA + A ++
Sbjct: 11 AAENGNKDRVKDLIENGADVNASDSDGRTPLHYAAKEGHKEIVKLLISKGADVNAKDSDG 70
Query: 253 REPMLHIACKKNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKVVELLLKHGAS 311
R P LH A K+ ++V+LL+ GA + A ++ R P LH A K+ ++V+LL+ GA
Sbjct: 71 RTP-LHYAAKEGHKEIVKLLISKGADVNAKDSDGRTP-LHYAAKEGHKEIVKLLISKGAD 128
Query: 312 IEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 346
+ + L +A + ++V+LL K G +E
Sbjct: 129 VNTSDSDGRTPLDLAREHGNEEIVKLLEKQGGWLE 163
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 78/134 (58%), Gaps = 20/134 (14%)
Query: 35 TPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISS 94
TPLH AAK G +V LL+S+GA+++ K DG T LH AA+ GH+ ++++L+ +GA +++
Sbjct: 39 TPLHYAAKEGHKEIVKLLISKGADVNAKDSDGRTPLHYAAKEGHKEIVKLLISKGADVNA 98
Query: 95 KT---KVRGFYILRSGHEAVIEMLLEQGAPISSKTKVAAVLLENGASLTSTTKKGFTPLH 151
K + Y + GH+ ++++L+ +GA ++ ++ G TPL
Sbjct: 99 KDSDGRTPLHYAAKEGHKEIVKLLISKGADVN-----------------TSDSDGRTPLD 141
Query: 152 LTGKYGHIKVAKLL 165
L ++G+ ++ KLL
Sbjct: 142 LAREHGNEEIVKLL 155
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 79/148 (53%), Gaps = 23/148 (15%)
Query: 40 AAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISSKT--- 96
AA+ G + V L+ GA+++ DG T LH AA+ GH+ ++++L+ +GA +++K
Sbjct: 11 AAENGNKDRVKDLIENGADVNASDSDGRTPLHYAAKEGHKEIVKLLISKGADVNAKDSDG 70
Query: 97 KVRGFYILRSGHEAVIEMLLEQGAPISSKTKVAAVLLENGASLTSTTKKGFTPLHLTGKY 156
+ Y + GH+ ++++L+ +GA +++K G TPLH K
Sbjct: 71 RTPLHYAAKEGHKEIVKLLISKGADVNAK-----------------DSDGRTPLHYAAKE 113
Query: 157 GHIKVAKLLLQKDAPV---DFQGKAPVD 181
GH ++ KLL+ K A V D G+ P+D
Sbjct: 114 GHKEIVKLLISKGADVNTSDSDGRTPLD 141
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 76/141 (53%), Gaps = 2/141 (1%)
Query: 174 FQGKAPVDDVTVDYLTALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRI 233
+ A V+ D T LH AA GH + K L+ K AD NA+ +G TPLH A K+
Sbjct: 24 IENGADVNASDSDGRTPLHYAAKEGHKEIVKLLISKGADVNAKDSDGRTPLHYAAKEGHK 83
Query: 234 KVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHI 292
++V+LL+ GA + A ++ R P LH A K+ ++V+LL+ GA + + L +
Sbjct: 84 EIVKLLISKGADVNAKDSDGRTP-LHYAAKEGHKEIVKLLISKGADVNTSDSDGRTPLDL 142
Query: 293 ACKKNRIKVVELLLKHGASIE 313
A + ++V+LL K G +E
Sbjct: 143 AREHGNEEIVKLLEKQGGWLE 163
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 91/165 (55%), Gaps = 5/165 (3%)
Query: 250 TEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG 309
+E+ + ++ A N+ +V +L+ ++GA + A+ LH A K+ ++V+LL+ G
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLI-ENGADVNASDSDGRTPLHYAAKEGHKEIVKLLISKG 60
Query: 310 ASIEA-TTEVREPMLHIACKKNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKV 367
A + A ++ R P LH A K+ ++V+LL+ GA + A ++ R P LH A K+ ++
Sbjct: 61 ADVNAKDSDGRTP-LHYAAKEGHKEIVKLLISKGADVNAKDSDGRTP-LHYAAKEGHKEI 118
Query: 368 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 412
V+LL+ GA + + L +A + ++V+LL K G +E
Sbjct: 119 VKLLISKGADVNTSDSDGRTPLDLAREHGNEEIVKLLEKQGGWLE 163
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 91/165 (55%), Gaps = 5/165 (3%)
Query: 283 TEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG 342
+E+ + ++ A N+ +V +L+ ++GA + A+ LH A K+ ++V+LL+ G
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLI-ENGADVNASDSDGRTPLHYAAKEGHKEIVKLLISKG 60
Query: 343 ASIEA-TTEVREPMLHIACKKNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKV 400
A + A ++ R P LH A K+ ++V+LL+ GA + A ++ R P LH A K+ ++
Sbjct: 61 ADVNAKDSDGRTP-LHYAAKEGHKEIVKLLISKGADVNAKDSDGRTP-LHYAAKEGHKEI 118
Query: 401 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 445
V+LL+ GA + + L +A + ++V+LL K G +E
Sbjct: 119 VKLLISKGADVNTSDSDGRTPLDLAREHGNEEIVKLLEKQGGWLE 163
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 91/165 (55%), Gaps = 5/165 (3%)
Query: 316 TEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG 375
+E+ + ++ A N+ +V +L+ ++GA + A+ LH A K+ ++V+LL+ G
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLI-ENGADVNASDSDGRTPLHYAAKEGHKEIVKLLISKG 60
Query: 376 ASIEA-TTEVREPMLHIACKKNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKV 433
A + A ++ R P LH A K+ ++V+LL+ GA + A ++ R P LH A K+ ++
Sbjct: 61 ADVNAKDSDGRTP-LHYAAKEGHKEIVKLLISKGADVNAKDSDGRTP-LHYAAKEGHKEI 118
Query: 434 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 478
V+LL+ GA + + L +A + ++V+LL K G +E
Sbjct: 119 VKLLISKGADVNTSDSDGRTPLDLAREHGNEEIVKLLEKQGGWLE 163
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 91/165 (55%), Gaps = 5/165 (3%)
Query: 349 TEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG 408
+E+ + ++ A N+ +V +L+ ++GA + A+ LH A K+ ++V+LL+ G
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLI-ENGADVNASDSDGRTPLHYAAKEGHKEIVKLLISKG 60
Query: 409 ASIEA-TTEVREPMLHIACKKNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKV 466
A + A ++ R P LH A K+ ++V+LL+ GA + A ++ R P LH A K+ ++
Sbjct: 61 ADVNAKDSDGRTP-LHYAAKEGHKEIVKLLISKGADVNAKDSDGRTP-LHYAAKEGHKEI 118
Query: 467 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 511
V+LL+ GA + + L +A + ++V+LL K G +E
Sbjct: 119 VKLLISKGADVNTSDSDGRTPLDLAREHGNEEIVKLLEKQGGWLE 163
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 91/165 (55%), Gaps = 5/165 (3%)
Query: 382 TEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG 441
+E+ + ++ A N+ +V +L+ ++GA + A+ LH A K+ ++V+LL+ G
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLI-ENGADVNASDSDGRTPLHYAAKEGHKEIVKLLISKG 60
Query: 442 ASIEA-TTEVREPMLHIACKKNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKV 499
A + A ++ R P LH A K+ ++V+LL+ GA + A ++ R P LH A K+ ++
Sbjct: 61 ADVNAKDSDGRTP-LHYAAKEGHKEIVKLLISKGADVNAKDSDGRTP-LHYAAKEGHKEI 118
Query: 500 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 544
V+LL+ GA + + L +A + ++V+LL K G +E
Sbjct: 119 VKLLISKGADVNTSDSDGRTPLDLAREHGNEEIVKLLEKQGGWLE 163
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 91/165 (55%), Gaps = 5/165 (3%)
Query: 415 TEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG 474
+E+ + ++ A N+ +V +L+ ++GA + A+ LH A K+ ++V+LL+ G
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLI-ENGADVNASDSDGRTPLHYAAKEGHKEIVKLLISKG 60
Query: 475 ASIEA-TTEVREPMLHIACKKNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKV 532
A + A ++ R P LH A K+ ++V+LL+ GA + A ++ R P LH A K+ ++
Sbjct: 61 ADVNAKDSDGRTP-LHYAAKEGHKEIVKLLISKGADVNAKDSDGRTP-LHYAAKEGHKEI 118
Query: 533 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 577
V+LL+ GA + + L +A + ++V+LL K G +E
Sbjct: 119 VKLLISKGADVNTSDSDGRTPLDLAREHGNEEIVKLLEKQGGWLE 163
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 91/165 (55%), Gaps = 5/165 (3%)
Query: 448 TEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG 507
+E+ + ++ A N+ +V +L+ ++GA + A+ LH A K+ ++V+LL+ G
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLI-ENGADVNASDSDGRTPLHYAAKEGHKEIVKLLISKG 60
Query: 508 ASIEA-TTEVREPMLHIACKKNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKV 565
A + A ++ R P LH A K+ ++V+LL+ GA + A ++ R P LH A K+ ++
Sbjct: 61 ADVNAKDSDGRTP-LHYAAKEGHKEIVKLLISKGADVNAKDSDGRTP-LHYAAKEGHKEI 118
Query: 566 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 610
V+LL+ GA + + L +A + ++V+LL K G +E
Sbjct: 119 VKLLISKGADVNTSDSDGRTPLDLAREHGNEEIVKLLEKQGGWLE 163
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 91/165 (55%), Gaps = 5/165 (3%)
Query: 481 TEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG 540
+E+ + ++ A N+ +V +L+ ++GA + A+ LH A K+ ++V+LL+ G
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLI-ENGADVNASDSDGRTPLHYAAKEGHKEIVKLLISKG 60
Query: 541 ASIEA-TTEVREPMLHIACKKNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKV 598
A + A ++ R P LH A K+ ++V+LL+ GA + A ++ R P LH A K+ ++
Sbjct: 61 ADVNAKDSDGRTP-LHYAAKEGHKEIVKLLISKGADVNAKDSDGRTP-LHYAAKEGHKEI 118
Query: 599 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 643
V+LL+ GA + + L +A + ++V+LL K G +E
Sbjct: 119 VKLLISKGADVNTSDSDGRTPLDLAREHGNEEIVKLLEKQGGWLE 163
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 91/165 (55%), Gaps = 5/165 (3%)
Query: 514 TEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG 573
+E+ + ++ A N+ +V +L+ ++GA + A+ LH A K+ ++V+LL+ G
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLI-ENGADVNASDSDGRTPLHYAAKEGHKEIVKLLISKG 60
Query: 574 ASIEA-TTEVREPMLHIACKKNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKV 631
A + A ++ R P LH A K+ ++V+LL+ GA + A ++ R P LH A K+ ++
Sbjct: 61 ADVNAKDSDGRTP-LHYAAKEGHKEIVKLLISKGADVNAKDSDGRTP-LHYAAKEGHKEI 118
Query: 632 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 676
V+LL+ GA + + L +A + ++V+LL K G +E
Sbjct: 119 VKLLISKGADVNTSDSDGRTPLDLAREHGNEEIVKLLEKQGGWLE 163
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 91/165 (55%), Gaps = 5/165 (3%)
Query: 547 TEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG 606
+E+ + ++ A N+ +V +L+ ++GA + A+ LH A K+ ++V+LL+ G
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLI-ENGADVNASDSDGRTPLHYAAKEGHKEIVKLLISKG 60
Query: 607 ASIEA-TTEVREPMLHIACKKNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKV 664
A + A ++ R P LH A K+ ++V+LL+ GA + A ++ R P LH A K+ ++
Sbjct: 61 ADVNAKDSDGRTP-LHYAAKEGHKEIVKLLISKGADVNAKDSDGRTP-LHYAAKEGHKEI 118
Query: 665 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 709
V+LL+ GA + + L +A + ++V+LL K G +E
Sbjct: 119 VKLLISKGADVNTSDSDGRTPLDLAREHGNEEIVKLLEKQGGWLE 163
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 91/165 (55%), Gaps = 5/165 (3%)
Query: 580 TEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG 639
+E+ + ++ A N+ +V +L+ ++GA + A+ LH A K+ ++V+LL+ G
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLI-ENGADVNASDSDGRTPLHYAAKEGHKEIVKLLISKG 60
Query: 640 ASIEA-TTEVREPMLHIACKKNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKV 697
A + A ++ R P LH A K+ ++V+LL+ GA + A ++ R P LH A K+ ++
Sbjct: 61 ADVNAKDSDGRTP-LHYAAKEGHKEIVKLLISKGADVNAKDSDGRTP-LHYAAKEGHKEI 118
Query: 698 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 742
V+LL+ GA + + L +A + ++V+LL K G +E
Sbjct: 119 VKLLISKGADVNTSDSDGRTPLDLAREHGNEEIVKLLEKQGGWLE 163
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 91/165 (55%), Gaps = 5/165 (3%)
Query: 613 TEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG 672
+E+ + ++ A N+ +V +L+ ++GA + A+ LH A K+ ++V+LL+ G
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLI-ENGADVNASDSDGRTPLHYAAKEGHKEIVKLLISKG 60
Query: 673 ASIEA-TTEVREPMLHIACKKNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKV 730
A + A ++ R P LH A K+ ++V+LL+ GA + A ++ R P LH A K+ ++
Sbjct: 61 ADVNAKDSDGRTP-LHYAAKEGHKEIVKLLISKGADVNAKDSDGRTP-LHYAAKEGHKEI 118
Query: 731 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 775
V+LL+ GA + + L +A + ++V+LL K G +E
Sbjct: 119 VKLLISKGADVNTSDSDGRTPLDLAREHGNEEIVKLLEKQGGWLE 163
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 91/165 (55%), Gaps = 5/165 (3%)
Query: 646 TEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG 705
+E+ + ++ A N+ +V +L+ ++GA + A+ LH A K+ ++V+LL+ G
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLI-ENGADVNASDSDGRTPLHYAAKEGHKEIVKLLISKG 60
Query: 706 ASIEA-TTEVREPMLHIACKKNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKV 763
A + A ++ R P LH A K+ ++V+LL+ GA + A ++ R P LH A K+ ++
Sbjct: 61 ADVNAKDSDGRTP-LHYAAKEGHKEIVKLLISKGADVNAKDSDGRTP-LHYAAKEGHKEI 118
Query: 764 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 808
V+LL+ GA + + L +A + ++V+LL K G +E
Sbjct: 119 VKLLISKGADVNTSDSDGRTPLDLAREHGNEEIVKLLEKQGGWLE 163
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 91/165 (55%), Gaps = 5/165 (3%)
Query: 679 TEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG 738
+E+ + ++ A N+ +V +L+ ++GA + A+ LH A K+ ++V+LL+ G
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLI-ENGADVNASDSDGRTPLHYAAKEGHKEIVKLLISKG 60
Query: 739 ASIEA-TTEVREPMLHIACKKNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKV 796
A + A ++ R P LH A K+ ++V+LL+ GA + A ++ R P LH A K+ ++
Sbjct: 61 ADVNAKDSDGRTP-LHYAAKEGHKEIVKLLISKGADVNAKDSDGRTP-LHYAAKEGHKEI 118
Query: 797 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 841
V+LL+ GA + + L +A + ++V+LL K G +E
Sbjct: 119 VKLLISKGADVNTSDSDGRTPLDLAREHGNEEIVKLLEKQGGWLE 163
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 91/165 (55%), Gaps = 5/165 (3%)
Query: 712 TEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG 771
+E+ + ++ A N+ +V +L+ ++GA + A+ LH A K+ ++V+LL+ G
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLI-ENGADVNASDSDGRTPLHYAAKEGHKEIVKLLISKG 60
Query: 772 ASIEA-TTEVREPMLHIACKKNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKV 829
A + A ++ R P LH A K+ ++V+LL+ GA + A ++ R P LH A K+ ++
Sbjct: 61 ADVNAKDSDGRTP-LHYAAKEGHKEIVKLLISKGADVNAKDSDGRTP-LHYAAKEGHKEI 118
Query: 830 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 874
V+LL+ GA + + L +A + ++V+LL K G +E
Sbjct: 119 VKLLISKGADVNTSDSDGRTPLDLAREHGNEEIVKLLEKQGGWLE 163
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 91/165 (55%), Gaps = 5/165 (3%)
Query: 745 TEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG 804
+E+ + ++ A N+ +V +L+ ++GA + A+ LH A K+ ++V+LL+ G
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLI-ENGADVNASDSDGRTPLHYAAKEGHKEIVKLLISKG 60
Query: 805 ASIEA-TTEVREPMLHIACKKNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKV 862
A + A ++ R P LH A K+ ++V+LL+ GA + A ++ R P LH A K+ ++
Sbjct: 61 ADVNAKDSDGRTP-LHYAAKEGHKEIVKLLISKGADVNAKDSDGRTP-LHYAAKEGHKEI 118
Query: 863 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 907
V+LL+ GA + + L +A + ++V+LL K G +E
Sbjct: 119 VKLLISKGADVNTSDSDGRTPLDLAREHGNEEIVKLLEKQGGWLE 163
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 84/152 (55%), Gaps = 7/152 (4%)
Query: 230 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEA-TTEVREP 288
K+R+K L+++GA + A+ LH A K+ ++V+LL+ GA + A ++ R P
Sbjct: 17 KDRVKD---LIENGADVNASDSDGRTPLHYAAKEGHKEIVKLLISKGADVNAKDSDGRTP 73
Query: 289 MLHIACKKNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKVVELLLKHGASIEA 347
LH A K+ ++V+LL+ GA + A ++ R P LH A K+ ++V+LL+ GA +
Sbjct: 74 -LHYAAKEGHKEIVKLLISKGADVNAKDSDGRTP-LHYAAKEGHKEIVKLLISKGADVNT 131
Query: 348 TTEVREPMLHIACKKNRIKVVELLLKHGASIE 379
+ L +A + ++V+LL K G +E
Sbjct: 132 SDSDGRTPLDLAREHGNEEIVKLLEKQGGWLE 163
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 89/162 (54%), Gaps = 5/162 (3%)
Query: 778 TEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG 837
+E+ + ++ A N+ +V +L+ ++GA + A+ LH A K+ ++V+LL+ G
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLI-ENGADVNASDSDGRTPLHYAAKEGHKEIVKLLISKG 60
Query: 838 ASIEA-TTEVREPMLHIACKKNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKV 895
A + A ++ R P LH A K+ ++V+LL+ GA + A ++ R P LH A K+ ++
Sbjct: 61 ADVNAKDSDGRTP-LHYAAKEGHKEIVKLLISKGADVNAKDSDGRTP-LHYAAKEGHKEI 118
Query: 896 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 937
V+LL+ GA + + L +A + ++V+LL K G
Sbjct: 119 VKLLISKGADVNTSDSDGRTPLDLAREHGNEEIVKLLEKQGG 160
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 97/207 (46%), Gaps = 47/207 (22%)
Query: 844 TEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG 903
+E+ + ++ A N+ +V +L+ ++GA + A+ LH A K+ ++V+LL+ G
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLI-ENGADVNASDSDGRTPLHYAAKEGHKEIVKLLISKG 60
Query: 904 ASIEA-TTEVREPMLHIACKKNRIKVVELLLKHGASSHVVSCYSNVKVHVSLNKIQDVSS 962
A + A ++ R P LH A K+ ++V+LL+ GA
Sbjct: 61 ADVNAKDSDGRTP-LHYAAKEGHKEIVKLLISKGA------------------------- 94
Query: 963 SILRLATCDVLPQCETRLNFSNLRVREQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKD 1022
DV N + + +TPLH A++ G+ +IV LL+ GA V+++ D
Sbjct: 95 --------DV-----------NAKDSDGRTPLHYAAKEGHKEIVKLLISKGADVNTSDSD 135
Query: 1023 LYTALHIAAKEGQEEVAAVLLENGASL 1049
T L +A + G EE+ +L + G L
Sbjct: 136 GRTPLDLAREHGNEEIVKLLEKQGGWL 162
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%)
Query: 35 TPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGA 90
TPLH AAK G +V LL+S+GA+++ DG T L A G+E ++++L +QG
Sbjct: 105 TPLHYAAKEGHKEIVKLLISKGADVNTSDSDGRTPLDLAREHGNEEIVKLLEKQGG 160
>pdb|3NOC|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb:
Plasticity Of The Interface
pdb|3NOC|E Chain E, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb:
Plasticity Of The Interface
Length = 169
Score = 104 bits (259), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 94/170 (55%), Gaps = 13/170 (7%)
Query: 1022 DLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAP 1081
DL L AA+ GQ++ +L+ NGA + + G+TPLHL +GH+++ ++LL+ A
Sbjct: 13 DLGKKLLEAARAGQDDEVRILMANGADVNARDFTGWTPLHLAAHFGHLEIVEVLLKNGAD 72
Query: 1082 VDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHL 1141
V+ + GVTPLH+A+ H ++I LL+ GA NA GFTPLHL
Sbjct: 73 VNAKDSLGVTPLHLAARRGH-------------LEIVEVLLKNGADVNASDSHGFTPLHL 119
Query: 1142 SASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNN 1191
+A GH ++ +LL++GADV+ K G T + +AE+L K N
Sbjct: 120 AAKRGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169
Score = 97.8 bits (242), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 84/147 (57%)
Query: 194 AAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVR 253
AA G + L+ AD NAR G+TPLH+A +++VE+LLK+GA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNARDFTGWTPLHLAAHFGHLEIVEVLLKNGADVNAKDSLG 80
Query: 254 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 313
LH+A ++ +++VE+LLK+GA + A+ LH+A K+ +++VE+LLK+GA +
Sbjct: 81 VTPLHLAARRGHLEIVEVLLKNGADVNASDSHGFTPLHLAAKRGHLEIVEVLLKNGADVN 140
Query: 314 ATTEVREPMLHIACKKNRIKVVELLLK 340
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 85/156 (54%), Gaps = 13/156 (8%)
Query: 1065 KYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEY 1124
+ G ++L+ A V+ + G TPLH+A+H+ H ++I LL+
Sbjct: 23 RAGQDDEVRILMANGADVNARDFTGWTPLHLAAHFGH-------------LEIVEVLLKN 69
Query: 1125 GAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVA 1184
GA NA+ G TPLHL+A GH ++ +LL++GADV+ + +G TPLHL A+ + +
Sbjct: 70 GADVNAKDSLGVTPLHLAARRGHLEIVEVLLKNGADVNASDSHGFTPLHLAAKRGHLEIV 129
Query: 1185 ELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLL 1220
E+LLKN A V+ K G T I+ G +A +L
Sbjct: 130 EVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 81/144 (56%), Gaps = 8/144 (5%)
Query: 131 VLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKAPVDDVTVDYLTA 190
+L+ NGA + + G+TPLHL +GH+++ ++LL+ A V+ + V T
Sbjct: 32 ILMANGADVNARDFTGWTPLHLAAHFGHLEIVEVLLKNGADVNAKDSLGV--------TP 83
Query: 191 LHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATT 250
LH+AA GH + + LL AD NA +GFTPLH+A K+ +++VE+LLK+GA + A
Sbjct: 84 LHLAARRGHLEIVEVLLKNGADVNASDSHGFTPLHLAAKRGHLEIVEVLLKNGADVNAQD 143
Query: 251 EVREPMLHIACKKNRIKVVELLLK 274
+ + I+ + E+L K
Sbjct: 144 KFGKTAFDISIDNGNEDLAEILQK 167
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 75/125 (60%), Gaps = 2/125 (1%)
Query: 1265 SAQQGHSTIVALLLDRGASPNATN-KGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTR 1323
+A+ G V +L+ GA NA + G+TPLH +A GH IV +LL GA NA + +
Sbjct: 21 AARAGQDDEVRILMANGADVNARDFTGWTPLHLAAHFGHLEIVEVLLKNGADVNAKD-SL 79
Query: 1324 GFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGASP 1383
G TPLH+A G + + +LL A+V+ + GFTPLH +A++GH IV +LL GA
Sbjct: 80 GVTPLHLAARRGHLEIVEVLLKNGADVNASDSHGFTPLHLAAKRGHLEIVEVLLKNGADV 139
Query: 1384 NATNK 1388
NA +K
Sbjct: 140 NAQDK 144
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 71/128 (55%)
Query: 1106 LLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAA 1165
LL + D L+ GA NA G+TPLHL+A GH ++ +LL++GADV+
Sbjct: 18 LLEAARAGQDDEVRILMANGADVNARDFTGWTPLHLAAHFGHLEIVEVLLKNGADVNAKD 77
Query: 1166 KNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSA 1225
G+TPLHL A+ + + E+LLKN A V+ GFTPLH+A G + + +LL A
Sbjct: 78 SLGVTPLHLAARRGHLEIVEVLLKNGADVNASDSHGFTPLHLAAKRGHLEIVEVLLKNGA 137
Query: 1226 NVTVPKNF 1233
+V F
Sbjct: 138 DVNAQDKF 145
Score = 91.3 bits (225), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 79/125 (63%)
Query: 984 NLRVREQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLL 1043
N R TPLH+A+ G+++IV +LL++GA V++ T LH+AA+ G E+ VLL
Sbjct: 41 NARDFTGWTPLHLAAHFGHLEIVEVLLKNGADVNAKDSLGVTPLHLAARRGHLEIVEVLL 100
Query: 1044 ENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQN 1103
+NGA + ++ GFTPLHL K GH+++ ++LL+ A V+ Q K G T ++ +++
Sbjct: 101 KNGADVNASDSHGFTPLHLAAKRGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNED 160
Query: 1104 VALLL 1108
+A +L
Sbjct: 161 LAEIL 165
Score = 90.5 bits (223), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 86/158 (54%), Gaps = 13/158 (8%)
Query: 997 ASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKG 1056
A+R G D V +L+ +GA V++ +T LH+AA G E+ VLL+NGA + + G
Sbjct: 21 AARAGQDDEVRILMANGADVNARDFTGWTPLHLAAHFGHLEIVEVLLKNGADVNAKDSLG 80
Query: 1057 FTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMD 1116
TPLHL + GH+++ ++LL+ A V+ +G TPLH+A+ H ++
Sbjct: 81 VTPLHLAARRGHLEIVEVLLKNGADVNASDSHGFTPLHLAAKRGH-------------LE 127
Query: 1117 IATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAML 1154
I LL+ GA NA+ G T +S G+ D++ +L
Sbjct: 128 IVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 88.2 bits (217), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 82/156 (52%), Gaps = 14/156 (8%)
Query: 155 KYGHIKVAKLLLQKDAPV---DFQGKAPVDDVTVDYLTALHVAAHCGHARVAKTLLDKKA 211
+ G ++L+ A V DF G P LH+AAH GH + + LL A
Sbjct: 23 RAGQDDEVRILMANGADVNARDFTGWTP-----------LHLAAHFGHLEIVEVLLKNGA 71
Query: 212 DPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVEL 271
D NA+ G TPLH+A ++ +++VE+LLK+GA + A+ LH+A K+ +++VE+
Sbjct: 72 DVNAKDSLGVTPLHLAARRGHLEIVEVLLKNGADVNASDSHGFTPLHLAAKRGHLEIVEV 131
Query: 272 LLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 307
LLK+GA + A + + I+ + E+L K
Sbjct: 132 LLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 85.1 bits (209), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 69/120 (57%), Gaps = 2/120 (1%)
Query: 1258 GFTPLHHSAQQGHSTIVALLLDRGASPNATNK-GFTPLHHSAQQGHSTIVALLLDRGASP 1316
G+TPLH +A GH IV +LL GA NA + G TPLH +A++GH IV +LL GA
Sbjct: 47 GWTPLHLAAHFGHLEIVEVLLKNGADVNAKDSLGVTPLHLAARRGHLEIVEVLLKNGADV 106
Query: 1317 NATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALL 1376
NA++ + GFTPLH+A G + + +LL A+V+ G T S G+ + +L
Sbjct: 107 NASD-SHGFTPLHLAAKRGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 81/147 (55%)
Query: 227 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 286
A + + V +L+ +GA + A LH+A +++VE+LLK+GA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNARDFTGWTPLHLAAHFGHLEIVEVLLKNGADVNAKDSLG 80
Query: 287 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 346
LH+A ++ +++VE+LLK+GA + A+ LH+A K+ +++VE+LLK+GA +
Sbjct: 81 VTPLHLAARRGHLEIVEVLLKNGADVNASDSHGFTPLHLAAKRGHLEIVEVLLKNGADVN 140
Query: 347 ATTEVREPMLHIACKKNRIKVVELLLK 373
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 81/147 (55%)
Query: 260 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 319
A + + V +L+ +GA + A LH+A +++VE+LLK+GA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNARDFTGWTPLHLAAHFGHLEIVEVLLKNGADVNAKDSLG 80
Query: 320 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 379
LH+A ++ +++VE+LLK+GA + A+ LH+A K+ +++VE+LLK+GA +
Sbjct: 81 VTPLHLAARRGHLEIVEVLLKNGADVNASDSHGFTPLHLAAKRGHLEIVEVLLKNGADVN 140
Query: 380 ATTEVREPMLHIACKKNRIKVVELLLK 406
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 81/147 (55%)
Query: 293 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 352
A + + V +L+ +GA + A LH+A +++VE+LLK+GA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNARDFTGWTPLHLAAHFGHLEIVEVLLKNGADVNAKDSLG 80
Query: 353 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 412
LH+A ++ +++VE+LLK+GA + A+ LH+A K+ +++VE+LLK+GA +
Sbjct: 81 VTPLHLAARRGHLEIVEVLLKNGADVNASDSHGFTPLHLAAKRGHLEIVEVLLKNGADVN 140
Query: 413 ATTEVREPMLHIACKKNRIKVVELLLK 439
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 81/147 (55%)
Query: 326 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 385
A + + V +L+ +GA + A LH+A +++VE+LLK+GA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNARDFTGWTPLHLAAHFGHLEIVEVLLKNGADVNAKDSLG 80
Query: 386 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 445
LH+A ++ +++VE+LLK+GA + A+ LH+A K+ +++VE+LLK+GA +
Sbjct: 81 VTPLHLAARRGHLEIVEVLLKNGADVNASDSHGFTPLHLAAKRGHLEIVEVLLKNGADVN 140
Query: 446 ATTEVREPMLHIACKKNRIKVVELLLK 472
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 81/147 (55%)
Query: 359 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 418
A + + V +L+ +GA + A LH+A +++VE+LLK+GA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNARDFTGWTPLHLAAHFGHLEIVEVLLKNGADVNAKDSLG 80
Query: 419 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 478
LH+A ++ +++VE+LLK+GA + A+ LH+A K+ +++VE+LLK+GA +
Sbjct: 81 VTPLHLAARRGHLEIVEVLLKNGADVNASDSHGFTPLHLAAKRGHLEIVEVLLKNGADVN 140
Query: 479 ATTEVREPMLHIACKKNRIKVVELLLK 505
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 81/147 (55%)
Query: 392 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 451
A + + V +L+ +GA + A LH+A +++VE+LLK+GA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNARDFTGWTPLHLAAHFGHLEIVEVLLKNGADVNAKDSLG 80
Query: 452 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 511
LH+A ++ +++VE+LLK+GA + A+ LH+A K+ +++VE+LLK+GA +
Sbjct: 81 VTPLHLAARRGHLEIVEVLLKNGADVNASDSHGFTPLHLAAKRGHLEIVEVLLKNGADVN 140
Query: 512 ATTEVREPMLHIACKKNRIKVVELLLK 538
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 81/147 (55%)
Query: 425 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 484
A + + V +L+ +GA + A LH+A +++VE+LLK+GA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNARDFTGWTPLHLAAHFGHLEIVEVLLKNGADVNAKDSLG 80
Query: 485 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 544
LH+A ++ +++VE+LLK+GA + A+ LH+A K+ +++VE+LLK+GA +
Sbjct: 81 VTPLHLAARRGHLEIVEVLLKNGADVNASDSHGFTPLHLAAKRGHLEIVEVLLKNGADVN 140
Query: 545 ATTEVREPMLHIACKKNRIKVVELLLK 571
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 81/147 (55%)
Query: 458 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 517
A + + V +L+ +GA + A LH+A +++VE+LLK+GA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNARDFTGWTPLHLAAHFGHLEIVEVLLKNGADVNAKDSLG 80
Query: 518 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 577
LH+A ++ +++VE+LLK+GA + A+ LH+A K+ +++VE+LLK+GA +
Sbjct: 81 VTPLHLAARRGHLEIVEVLLKNGADVNASDSHGFTPLHLAAKRGHLEIVEVLLKNGADVN 140
Query: 578 ATTEVREPMLHIACKKNRIKVVELLLK 604
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 81/147 (55%)
Query: 491 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 550
A + + V +L+ +GA + A LH+A +++VE+LLK+GA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNARDFTGWTPLHLAAHFGHLEIVEVLLKNGADVNAKDSLG 80
Query: 551 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 610
LH+A ++ +++VE+LLK+GA + A+ LH+A K+ +++VE+LLK+GA +
Sbjct: 81 VTPLHLAARRGHLEIVEVLLKNGADVNASDSHGFTPLHLAAKRGHLEIVEVLLKNGADVN 140
Query: 611 ATTEVREPMLHIACKKNRIKVVELLLK 637
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 81/147 (55%)
Query: 524 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 583
A + + V +L+ +GA + A LH+A +++VE+LLK+GA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNARDFTGWTPLHLAAHFGHLEIVEVLLKNGADVNAKDSLG 80
Query: 584 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 643
LH+A ++ +++VE+LLK+GA + A+ LH+A K+ +++VE+LLK+GA +
Sbjct: 81 VTPLHLAARRGHLEIVEVLLKNGADVNASDSHGFTPLHLAAKRGHLEIVEVLLKNGADVN 140
Query: 644 ATTEVREPMLHIACKKNRIKVVELLLK 670
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 81/147 (55%)
Query: 557 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 616
A + + V +L+ +GA + A LH+A +++VE+LLK+GA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNARDFTGWTPLHLAAHFGHLEIVEVLLKNGADVNAKDSLG 80
Query: 617 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 676
LH+A ++ +++VE+LLK+GA + A+ LH+A K+ +++VE+LLK+GA +
Sbjct: 81 VTPLHLAARRGHLEIVEVLLKNGADVNASDSHGFTPLHLAAKRGHLEIVEVLLKNGADVN 140
Query: 677 ATTEVREPMLHIACKKNRIKVVELLLK 703
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 81/147 (55%)
Query: 590 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 649
A + + V +L+ +GA + A LH+A +++VE+LLK+GA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNARDFTGWTPLHLAAHFGHLEIVEVLLKNGADVNAKDSLG 80
Query: 650 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 709
LH+A ++ +++VE+LLK+GA + A+ LH+A K+ +++VE+LLK+GA +
Sbjct: 81 VTPLHLAARRGHLEIVEVLLKNGADVNASDSHGFTPLHLAAKRGHLEIVEVLLKNGADVN 140
Query: 710 ATTEVREPMLHIACKKNRIKVVELLLK 736
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 81/147 (55%)
Query: 623 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 682
A + + V +L+ +GA + A LH+A +++VE+LLK+GA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNARDFTGWTPLHLAAHFGHLEIVEVLLKNGADVNAKDSLG 80
Query: 683 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 742
LH+A ++ +++VE+LLK+GA + A+ LH+A K+ +++VE+LLK+GA +
Sbjct: 81 VTPLHLAARRGHLEIVEVLLKNGADVNASDSHGFTPLHLAAKRGHLEIVEVLLKNGADVN 140
Query: 743 ATTEVREPMLHIACKKNRIKVVELLLK 769
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 81/147 (55%)
Query: 656 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 715
A + + V +L+ +GA + A LH+A +++VE+LLK+GA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNARDFTGWTPLHLAAHFGHLEIVEVLLKNGADVNAKDSLG 80
Query: 716 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 775
LH+A ++ +++VE+LLK+GA + A+ LH+A K+ +++VE+LLK+GA +
Sbjct: 81 VTPLHLAARRGHLEIVEVLLKNGADVNASDSHGFTPLHLAAKRGHLEIVEVLLKNGADVN 140
Query: 776 ATTEVREPMLHIACKKNRIKVVELLLK 802
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 81/147 (55%)
Query: 689 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 748
A + + V +L+ +GA + A LH+A +++VE+LLK+GA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNARDFTGWTPLHLAAHFGHLEIVEVLLKNGADVNAKDSLG 80
Query: 749 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 808
LH+A ++ +++VE+LLK+GA + A+ LH+A K+ +++VE+LLK+GA +
Sbjct: 81 VTPLHLAARRGHLEIVEVLLKNGADVNASDSHGFTPLHLAAKRGHLEIVEVLLKNGADVN 140
Query: 809 ATTEVREPMLHIACKKNRIKVVELLLK 835
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 81/147 (55%)
Query: 722 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 781
A + + V +L+ +GA + A LH+A +++VE+LLK+GA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNARDFTGWTPLHLAAHFGHLEIVEVLLKNGADVNAKDSLG 80
Query: 782 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 841
LH+A ++ +++VE+LLK+GA + A+ LH+A K+ +++VE+LLK+GA +
Sbjct: 81 VTPLHLAARRGHLEIVEVLLKNGADVNASDSHGFTPLHLAAKRGHLEIVEVLLKNGADVN 140
Query: 842 ATTEVREPMLHIACKKNRIKVVELLLK 868
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 81/147 (55%)
Query: 755 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 814
A + + V +L+ +GA + A LH+A +++VE+LLK+GA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNARDFTGWTPLHLAAHFGHLEIVEVLLKNGADVNAKDSLG 80
Query: 815 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 874
LH+A ++ +++VE+LLK+GA + A+ LH+A K+ +++VE+LLK+GA +
Sbjct: 81 VTPLHLAARRGHLEIVEVLLKNGADVNASDSHGFTPLHLAAKRGHLEIVEVLLKNGADVN 140
Query: 875 ATTEVREPMLHIACKKNRIKVVELLLK 901
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 81/147 (55%)
Query: 788 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 847
A + + V +L+ +GA + A LH+A +++VE+LLK+GA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNARDFTGWTPLHLAAHFGHLEIVEVLLKNGADVNAKDSLG 80
Query: 848 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 907
LH+A ++ +++VE+LLK+GA + A+ LH+A K+ +++VE+LLK+GA +
Sbjct: 81 VTPLHLAARRGHLEIVEVLLKNGADVNASDSHGFTPLHLAAKRGHLEIVEVLLKNGADVN 140
Query: 908 ATTEVREPMLHIACKKNRIKVVELLLK 934
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 86/154 (55%), Gaps = 26/154 (16%)
Query: 40 AAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISSKTKVR 99
AA+ G+ + V +L++ GA+++ + G T LH AA GH ++E+LL+ GA +++K +
Sbjct: 21 AARAGQDDEVRILMANGADVNARDFTGWTPLHLAAHFGHLEIVEVLLKNGADVNAKDSL- 79
Query: 100 GFYIL----RSGHEAVIEMLLEQGAPISSKTKVAAVLLENGASLTSTTKKGFTPLHLTGK 155
G L R GH ++E VLL+NGA + ++ GFTPLHL K
Sbjct: 80 GVTPLHLAARRGHLEIVE-----------------VLLKNGADVNASDSHGFTPLHLAAK 122
Query: 156 YGHIKVAKLLLQKDAPVDFQ---GKAPVDDVTVD 186
GH+++ ++LL+ A V+ Q GK D+++D
Sbjct: 123 RGHLEIVEVLLKNGADVNAQDKFGKTAF-DISID 155
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 81/146 (55%)
Query: 821 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 880
A + + V +L+ +GA + A LH+A +++VE+LLK+GA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNARDFTGWTPLHLAAHFGHLEIVEVLLKNGADVNAKDSLG 80
Query: 881 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASSH 940
LH+A ++ +++VE+LLK+GA + A+ LH+A K+ +++VE+LLK+GA +
Sbjct: 81 VTPLHLAARRGHLEIVEVLLKNGADVNASDSHGFTPLHLAAKRGHLEIVEVLLKNGADVN 140
Query: 941 VVSCYSNVKVHVSLNKIQDVSSSILR 966
+ +S++ + + IL+
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQ 166
Score = 70.1 bits (170), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 63/99 (63%), Gaps = 5/99 (5%)
Query: 35 TPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISS 94
TPLH+AA +G +V +LL GA+++ K G+T LH AAR GH ++E+LL+ GA +++
Sbjct: 49 TPLHLAAHFGHLEIVEVLLKNGADVNAKDSLGVTPLHLAARRGHLEIVEVLLKNGADVNA 108
Query: 95 KTKVRGFYIL----RSGHEAVIEMLLEQGAPISSKTKVA 129
+ GF L + GH ++E+LL+ GA ++++ K
Sbjct: 109 -SDSHGFTPLHLAAKRGHLEIVEVLLKNGADVNAQDKFG 146
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 54/85 (63%), Gaps = 3/85 (3%)
Query: 34 ITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPIS 93
+TPLH+AA+ G +V +LL GA+++ G T LH AA+ GH ++E+LL+ GA ++
Sbjct: 81 VTPLHLAARRGHLEIVEVLLKNGADVNASDSHGFTPLHLAAKRGHLEIVEVLLKNGADVN 140
Query: 94 SKTKV--RGFYI-LRSGHEAVIEML 115
++ K F I + +G+E + E+L
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 34/54 (62%)
Query: 32 HNITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEML 85
H TPLH+AAK G +V +LL GA+++ + + G TA + +G+E + E+L
Sbjct: 112 HGFTPLHLAAKRGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165
>pdb|2J8S|D Chain D, Drug Export Pathway Of Multidrug Exporter Acrb Revealed By
Darpin Inhibitors
pdb|2J8S|E Chain E, Drug Export Pathway Of Multidrug Exporter Acrb Revealed By
Darpin Inhibitors
pdb|4DX5|D Chain D, Transport Of Drugs By The Multidrug Transporter Acrb
Involves An Access And A Deep Binding Pocket That Are
Separated By A Switch-Loop
pdb|4DX5|E Chain E, Transport Of Drugs By The Multidrug Transporter Acrb
Involves An Access And A Deep Binding Pocket That Are
Separated By A Switch-Loop
pdb|4DX6|D Chain D, Transport Of Drugs By The Multidrug Transporter Acrb
Involves An Access And A Deep Binding Pocket That Are
Separated By A Switch-Loop
pdb|4DX6|E Chain E, Transport Of Drugs By The Multidrug Transporter Acrb
Involves An Access And A Deep Binding Pocket That Are
Separated By A Switch-Loop
pdb|4DX7|D Chain D, Transport Of Drugs By The Multidrug Transporter Acrb
Involves An Access And A Deep Binding Pocket That Are
Separated By A Switch-Loop
pdb|4DX7|E Chain E, Transport Of Drugs By The Multidrug Transporter Acrb
Involves An Access And A Deep Binding Pocket That Are
Separated By A Switch-Loop
Length = 169
Score = 103 bits (258), Expect = 5e-22, Method: Composition-based stats.
Identities = 60/170 (35%), Positives = 95/170 (55%), Gaps = 13/170 (7%)
Query: 1022 DLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAP 1081
DL L AA+ G+++ +L+ NGA + + G+TPLHL +GH+++ ++LL+ A
Sbjct: 13 DLGKKLLEAARAGRDDEVRILMANGADVNAADVVGWTPLHLAAYWGHLEIVEVLLKNGAD 72
Query: 1082 VDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHL 1141
V+ G TPLH+A+H+ H ++I LL+ GA NA+ G TPLHL
Sbjct: 73 VNAYDTLGSTPLHLAAHFGH-------------LEIVEVLLKNGADVNAKDDNGITPLHL 119
Query: 1142 SASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNN 1191
+A+ GH ++ +LL++GADV+ K G T + +AE+L K N
Sbjct: 120 AANRGHLEIVEVLLKYGADVNAQDKFGKTAFDISINNGNEDLAEILQKLN 169
Score = 99.8 bits (247), Expect = 1e-20, Method: Composition-based stats.
Identities = 56/158 (35%), Positives = 91/158 (57%), Gaps = 13/158 (8%)
Query: 997 ASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKG 1056
A+R G D V +L+ +GA V++ +T LH+AA G E+ VLL+NGA + + G
Sbjct: 21 AARAGRDDEVRILMANGADVNAADVVGWTPLHLAAYWGHLEIVEVLLKNGADVNAYDTLG 80
Query: 1057 FTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMD 1116
TPLHL +GH+++ ++LL+ A V+ + NG+TPLH+A++ H ++
Sbjct: 81 STPLHLAAHFGHLEIVEVLLKNGADVNAKDDNGITPLHLAANRGH-------------LE 127
Query: 1117 IATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAML 1154
I LL+YGA NA+ G T +S + G+ D++ +L
Sbjct: 128 IVEVLLKYGADVNAQDKFGKTAFDISINNGNEDLAEIL 165
Score = 96.3 bits (238), Expect = 1e-19, Method: Composition-based stats.
Identities = 56/128 (43%), Positives = 76/128 (59%), Gaps = 2/128 (1%)
Query: 1262 LHHSAQQGHSTIVALLLDRGASPNATNK-GFTPLHHSAQQGHSTIVALLLDRGASPNATN 1320
L +A+ G V +L+ GA NA + G+TPLH +A GH IV +LL GA NA +
Sbjct: 18 LLEAARAGRDDEVRILMANGADVNAADVVGWTPLHLAAYWGHLEIVEVLLKNGADVNAYD 77
Query: 1321 KTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRG 1380
T G TPLH+A H+G + + +LL A+V+ D G TPLH +A +GH IV +LL G
Sbjct: 78 -TLGSTPLHLAAHFGHLEIVEVLLKNGADVNAKDDNGITPLHLAANRGHLEIVEVLLKYG 136
Query: 1381 ASPNATNK 1388
A NA +K
Sbjct: 137 ADVNAQDK 144
Score = 89.4 bits (220), Expect = 1e-17, Method: Composition-based stats.
Identities = 50/128 (39%), Positives = 70/128 (54%)
Query: 1106 LLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAA 1165
LL + D L+ GA NA V G+TPLHL+A GH ++ +LL++GADV+
Sbjct: 18 LLEAARAGRDDEVRILMANGADVNAADVVGWTPLHLAAYWGHLEIVEVLLKNGADVNAYD 77
Query: 1166 KNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSA 1225
G TPLHL A + + E+LLKN A V+ G TPLH+A + G + + +LL A
Sbjct: 78 TLGSTPLHLAAHFGHLEIVEVLLKNGADVNAKDDNGITPLHLAANRGHLEIVEVLLKYGA 137
Query: 1226 NVTVPKNF 1233
+V F
Sbjct: 138 DVNAQDKF 145
Score = 87.8 bits (216), Expect = 4e-17, Method: Composition-based stats.
Identities = 53/148 (35%), Positives = 80/148 (54%), Gaps = 13/148 (8%)
Query: 1073 KLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAES 1132
++L+ A V+ G TPLH+A+++ H ++I LL+ GA NA
Sbjct: 31 RILMANGADVNAADVVGWTPLHLAAYWGH-------------LEIVEVLLKNGADVNAYD 77
Query: 1133 VAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNA 1192
G TPLHL+A GH ++ +LL++GADV+ NG+TPLHL A + + E+LLK A
Sbjct: 78 TLGSTPLHLAAHFGHLEIVEVLLKNGADVNAKDDNGITPLHLAANRGHLEIVEVLLKYGA 137
Query: 1193 QVDTPTKKGFTPLHIACHYGQISMARLL 1220
V+ K G T I+ + G +A +L
Sbjct: 138 DVNAQDKFGKTAFDISINNGNEDLAEIL 165
Score = 86.7 bits (213), Expect = 8e-17, Method: Composition-based stats.
Identities = 58/169 (34%), Positives = 80/169 (47%), Gaps = 25/169 (14%)
Query: 1142 SASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKG 1201
+A G D +L+ +GADV+ A G TPLHL A + + E+LLKN A V+ G
Sbjct: 21 AARAGRDDEVRILMANGADVNAADVVGWTPLHLAAYWGHLEIVEVLLKNGADVNAYDTLG 80
Query: 1202 FTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRXXXXXXXXXXXXXXYTNTTDQGFTP 1261
TPLH+A H+G + + +LL A+V D G TP
Sbjct: 81 STPLHLAAHFGHLEIVEVLLKNGADVNAKD------------------------DNGITP 116
Query: 1262 LHHSAQQGHSTIVALLLDRGASPNATNK-GFTPLHHSAQQGHSTIVALL 1309
LH +A +GH IV +LL GA NA +K G T S G+ + +L
Sbjct: 117 LHLAANRGHLEIVEVLLKYGADVNAQDKFGKTAFDISINNGNEDLAEIL 165
Score = 84.0 bits (206), Expect = 6e-16, Method: Composition-based stats.
Identities = 48/147 (32%), Positives = 81/147 (55%)
Query: 194 AAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVR 253
AA G + L+ AD NA + G+TPLH+A +++VE+LLK+GA + A +
Sbjct: 21 AARAGRDDEVRILMANGADVNAADVVGWTPLHLAAYWGHLEIVEVLLKNGADVNAYDTLG 80
Query: 254 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 313
LH+A +++VE+LLK+GA + A + LH+A + +++VE+LLK+GA +
Sbjct: 81 STPLHLAAHFGHLEIVEVLLKNGADVNAKDDNGITPLHLAANRGHLEIVEVLLKYGADVN 140
Query: 314 ATTEVREPMLHIACKKNRIKVVELLLK 340
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISINNGNEDLAEILQK 167
Score = 82.8 bits (203), Expect = 1e-15, Method: Composition-based stats.
Identities = 44/117 (37%), Positives = 74/117 (63%)
Query: 992 TPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTS 1051
TPLH+A+ G+++IV +LL++GA V++ T LH+AA G E+ VLL+NGA + +
Sbjct: 49 TPLHLAAYWGHLEIVEVLLKNGADVNAYDTLGSTPLHLAAHFGHLEIVEVLLKNGADVNA 108
Query: 1052 TTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLL 1108
G TPLHL GH+++ ++LL+ A V+ Q K G T ++ + ++++A +L
Sbjct: 109 KDDNGITPLHLAANRGHLEIVEVLLKYGADVNAQDKFGKTAFDISINNGNEDLAEIL 165
Score = 77.0 bits (188), Expect = 7e-14, Method: Composition-based stats.
Identities = 48/120 (40%), Positives = 65/120 (54%), Gaps = 2/120 (1%)
Query: 1258 GFTPLHHSAQQGHSTIVALLLDRGASPNATNK-GFTPLHHSAQQGHSTIVALLLDRGASP 1316
G+TPLH +A GH IV +LL GA NA + G TPLH +A GH IV +LL GA
Sbjct: 47 GWTPLHLAAYWGHLEIVEVLLKNGADVNAYDTLGSTPLHLAAHFGHLEIVEVLLKNGADV 106
Query: 1317 NATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALL 1376
NA + G TPLH+A + G + + +LL A+V+ G T S G+ + +L
Sbjct: 107 NAKDDN-GITPLHLAANRGHLEIVEVLLKYGADVNAQDKFGKTAFDISINNGNEDLAEIL 165
Score = 76.6 bits (187), Expect = 9e-14, Method: Composition-based stats.
Identities = 45/130 (34%), Positives = 71/130 (54%)
Query: 178 APVDDVTVDYLTALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVE 237
A V+ V T LH+AA+ GH + + LL AD NA G TPLH+A +++VE
Sbjct: 38 ADVNAADVVGWTPLHLAAYWGHLEIVEVLLKNGADVNAYDTLGSTPLHLAAHFGHLEIVE 97
Query: 238 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKN 297
+LLK+GA + A + LH+A + +++VE+LLK+GA + A + + I+
Sbjct: 98 VLLKNGADVNAKDDNGITPLHLAANRGHLEIVEVLLKYGADVNAQDKFGKTAFDISINNG 157
Query: 298 RIKVVELLLK 307
+ E+L K
Sbjct: 158 NEDLAEILQK 167
Score = 76.3 bits (186), Expect = 1e-13, Method: Composition-based stats.
Identities = 45/147 (30%), Positives = 79/147 (53%)
Query: 227 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 286
A + R V +L+ +GA + A V LH+A +++VE+LLK+GA + A +
Sbjct: 21 AARAGRDDEVRILMANGADVNAADVVGWTPLHLAAYWGHLEIVEVLLKNGADVNAYDTLG 80
Query: 287 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 346
LH+A +++VE+LLK+GA + A + LH+A + +++VE+LLK+GA +
Sbjct: 81 STPLHLAAHFGHLEIVEVLLKNGADVNAKDDNGITPLHLAANRGHLEIVEVLLKYGADVN 140
Query: 347 ATTEVREPMLHIACKKNRIKVVELLLK 373
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISINNGNEDLAEILQK 167
Score = 76.3 bits (186), Expect = 1e-13, Method: Composition-based stats.
Identities = 45/147 (30%), Positives = 79/147 (53%)
Query: 260 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 319
A + R V +L+ +GA + A V LH+A +++VE+LLK+GA + A +
Sbjct: 21 AARAGRDDEVRILMANGADVNAADVVGWTPLHLAAYWGHLEIVEVLLKNGADVNAYDTLG 80
Query: 320 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 379
LH+A +++VE+LLK+GA + A + LH+A + +++VE+LLK+GA +
Sbjct: 81 STPLHLAAHFGHLEIVEVLLKNGADVNAKDDNGITPLHLAANRGHLEIVEVLLKYGADVN 140
Query: 380 ATTEVREPMLHIACKKNRIKVVELLLK 406
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISINNGNEDLAEILQK 167
Score = 76.3 bits (186), Expect = 1e-13, Method: Composition-based stats.
Identities = 45/147 (30%), Positives = 79/147 (53%)
Query: 293 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 352
A + R V +L+ +GA + A V LH+A +++VE+LLK+GA + A +
Sbjct: 21 AARAGRDDEVRILMANGADVNAADVVGWTPLHLAAYWGHLEIVEVLLKNGADVNAYDTLG 80
Query: 353 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 412
LH+A +++VE+LLK+GA + A + LH+A + +++VE+LLK+GA +
Sbjct: 81 STPLHLAAHFGHLEIVEVLLKNGADVNAKDDNGITPLHLAANRGHLEIVEVLLKYGADVN 140
Query: 413 ATTEVREPMLHIACKKNRIKVVELLLK 439
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISINNGNEDLAEILQK 167
Score = 76.3 bits (186), Expect = 1e-13, Method: Composition-based stats.
Identities = 45/147 (30%), Positives = 79/147 (53%)
Query: 326 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 385
A + R V +L+ +GA + A V LH+A +++VE+LLK+GA + A +
Sbjct: 21 AARAGRDDEVRILMANGADVNAADVVGWTPLHLAAYWGHLEIVEVLLKNGADVNAYDTLG 80
Query: 386 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 445
LH+A +++VE+LLK+GA + A + LH+A + +++VE+LLK+GA +
Sbjct: 81 STPLHLAAHFGHLEIVEVLLKNGADVNAKDDNGITPLHLAANRGHLEIVEVLLKYGADVN 140
Query: 446 ATTEVREPMLHIACKKNRIKVVELLLK 472
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISINNGNEDLAEILQK 167
Score = 76.3 bits (186), Expect = 1e-13, Method: Composition-based stats.
Identities = 45/147 (30%), Positives = 79/147 (53%)
Query: 359 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 418
A + R V +L+ +GA + A V LH+A +++VE+LLK+GA + A +
Sbjct: 21 AARAGRDDEVRILMANGADVNAADVVGWTPLHLAAYWGHLEIVEVLLKNGADVNAYDTLG 80
Query: 419 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 478
LH+A +++VE+LLK+GA + A + LH+A + +++VE+LLK+GA +
Sbjct: 81 STPLHLAAHFGHLEIVEVLLKNGADVNAKDDNGITPLHLAANRGHLEIVEVLLKYGADVN 140
Query: 479 ATTEVREPMLHIACKKNRIKVVELLLK 505
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISINNGNEDLAEILQK 167
Score = 76.3 bits (186), Expect = 1e-13, Method: Composition-based stats.
Identities = 45/147 (30%), Positives = 79/147 (53%)
Query: 392 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 451
A + R V +L+ +GA + A V LH+A +++VE+LLK+GA + A +
Sbjct: 21 AARAGRDDEVRILMANGADVNAADVVGWTPLHLAAYWGHLEIVEVLLKNGADVNAYDTLG 80
Query: 452 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 511
LH+A +++VE+LLK+GA + A + LH+A + +++VE+LLK+GA +
Sbjct: 81 STPLHLAAHFGHLEIVEVLLKNGADVNAKDDNGITPLHLAANRGHLEIVEVLLKYGADVN 140
Query: 512 ATTEVREPMLHIACKKNRIKVVELLLK 538
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISINNGNEDLAEILQK 167
Score = 76.3 bits (186), Expect = 1e-13, Method: Composition-based stats.
Identities = 45/147 (30%), Positives = 79/147 (53%)
Query: 425 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 484
A + R V +L+ +GA + A V LH+A +++VE+LLK+GA + A +
Sbjct: 21 AARAGRDDEVRILMANGADVNAADVVGWTPLHLAAYWGHLEIVEVLLKNGADVNAYDTLG 80
Query: 485 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 544
LH+A +++VE+LLK+GA + A + LH+A + +++VE+LLK+GA +
Sbjct: 81 STPLHLAAHFGHLEIVEVLLKNGADVNAKDDNGITPLHLAANRGHLEIVEVLLKYGADVN 140
Query: 545 ATTEVREPMLHIACKKNRIKVVELLLK 571
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISINNGNEDLAEILQK 167
Score = 76.3 bits (186), Expect = 1e-13, Method: Composition-based stats.
Identities = 45/147 (30%), Positives = 79/147 (53%)
Query: 458 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 517
A + R V +L+ +GA + A V LH+A +++VE+LLK+GA + A +
Sbjct: 21 AARAGRDDEVRILMANGADVNAADVVGWTPLHLAAYWGHLEIVEVLLKNGADVNAYDTLG 80
Query: 518 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 577
LH+A +++VE+LLK+GA + A + LH+A + +++VE+LLK+GA +
Sbjct: 81 STPLHLAAHFGHLEIVEVLLKNGADVNAKDDNGITPLHLAANRGHLEIVEVLLKYGADVN 140
Query: 578 ATTEVREPMLHIACKKNRIKVVELLLK 604
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISINNGNEDLAEILQK 167
Score = 76.3 bits (186), Expect = 1e-13, Method: Composition-based stats.
Identities = 45/147 (30%), Positives = 79/147 (53%)
Query: 491 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 550
A + R V +L+ +GA + A V LH+A +++VE+LLK+GA + A +
Sbjct: 21 AARAGRDDEVRILMANGADVNAADVVGWTPLHLAAYWGHLEIVEVLLKNGADVNAYDTLG 80
Query: 551 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 610
LH+A +++VE+LLK+GA + A + LH+A + +++VE+LLK+GA +
Sbjct: 81 STPLHLAAHFGHLEIVEVLLKNGADVNAKDDNGITPLHLAANRGHLEIVEVLLKYGADVN 140
Query: 611 ATTEVREPMLHIACKKNRIKVVELLLK 637
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISINNGNEDLAEILQK 167
Score = 76.3 bits (186), Expect = 1e-13, Method: Composition-based stats.
Identities = 45/147 (30%), Positives = 79/147 (53%)
Query: 524 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 583
A + R V +L+ +GA + A V LH+A +++VE+LLK+GA + A +
Sbjct: 21 AARAGRDDEVRILMANGADVNAADVVGWTPLHLAAYWGHLEIVEVLLKNGADVNAYDTLG 80
Query: 584 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 643
LH+A +++VE+LLK+GA + A + LH+A + +++VE+LLK+GA +
Sbjct: 81 STPLHLAAHFGHLEIVEVLLKNGADVNAKDDNGITPLHLAANRGHLEIVEVLLKYGADVN 140
Query: 644 ATTEVREPMLHIACKKNRIKVVELLLK 670
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISINNGNEDLAEILQK 167
Score = 76.3 bits (186), Expect = 1e-13, Method: Composition-based stats.
Identities = 45/147 (30%), Positives = 79/147 (53%)
Query: 557 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 616
A + R V +L+ +GA + A V LH+A +++VE+LLK+GA + A +
Sbjct: 21 AARAGRDDEVRILMANGADVNAADVVGWTPLHLAAYWGHLEIVEVLLKNGADVNAYDTLG 80
Query: 617 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 676
LH+A +++VE+LLK+GA + A + LH+A + +++VE+LLK+GA +
Sbjct: 81 STPLHLAAHFGHLEIVEVLLKNGADVNAKDDNGITPLHLAANRGHLEIVEVLLKYGADVN 140
Query: 677 ATTEVREPMLHIACKKNRIKVVELLLK 703
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISINNGNEDLAEILQK 167
Score = 76.3 bits (186), Expect = 1e-13, Method: Composition-based stats.
Identities = 45/147 (30%), Positives = 79/147 (53%)
Query: 590 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 649
A + R V +L+ +GA + A V LH+A +++VE+LLK+GA + A +
Sbjct: 21 AARAGRDDEVRILMANGADVNAADVVGWTPLHLAAYWGHLEIVEVLLKNGADVNAYDTLG 80
Query: 650 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 709
LH+A +++VE+LLK+GA + A + LH+A + +++VE+LLK+GA +
Sbjct: 81 STPLHLAAHFGHLEIVEVLLKNGADVNAKDDNGITPLHLAANRGHLEIVEVLLKYGADVN 140
Query: 710 ATTEVREPMLHIACKKNRIKVVELLLK 736
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISINNGNEDLAEILQK 167
Score = 76.3 bits (186), Expect = 1e-13, Method: Composition-based stats.
Identities = 45/147 (30%), Positives = 79/147 (53%)
Query: 623 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 682
A + R V +L+ +GA + A V LH+A +++VE+LLK+GA + A +
Sbjct: 21 AARAGRDDEVRILMANGADVNAADVVGWTPLHLAAYWGHLEIVEVLLKNGADVNAYDTLG 80
Query: 683 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 742
LH+A +++VE+LLK+GA + A + LH+A + +++VE+LLK+GA +
Sbjct: 81 STPLHLAAHFGHLEIVEVLLKNGADVNAKDDNGITPLHLAANRGHLEIVEVLLKYGADVN 140
Query: 743 ATTEVREPMLHIACKKNRIKVVELLLK 769
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISINNGNEDLAEILQK 167
Score = 76.3 bits (186), Expect = 1e-13, Method: Composition-based stats.
Identities = 45/147 (30%), Positives = 79/147 (53%)
Query: 656 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 715
A + R V +L+ +GA + A V LH+A +++VE+LLK+GA + A +
Sbjct: 21 AARAGRDDEVRILMANGADVNAADVVGWTPLHLAAYWGHLEIVEVLLKNGADVNAYDTLG 80
Query: 716 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 775
LH+A +++VE+LLK+GA + A + LH+A + +++VE+LLK+GA +
Sbjct: 81 STPLHLAAHFGHLEIVEVLLKNGADVNAKDDNGITPLHLAANRGHLEIVEVLLKYGADVN 140
Query: 776 ATTEVREPMLHIACKKNRIKVVELLLK 802
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISINNGNEDLAEILQK 167
Score = 76.3 bits (186), Expect = 1e-13, Method: Composition-based stats.
Identities = 45/147 (30%), Positives = 79/147 (53%)
Query: 689 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 748
A + R V +L+ +GA + A V LH+A +++VE+LLK+GA + A +
Sbjct: 21 AARAGRDDEVRILMANGADVNAADVVGWTPLHLAAYWGHLEIVEVLLKNGADVNAYDTLG 80
Query: 749 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 808
LH+A +++VE+LLK+GA + A + LH+A + +++VE+LLK+GA +
Sbjct: 81 STPLHLAAHFGHLEIVEVLLKNGADVNAKDDNGITPLHLAANRGHLEIVEVLLKYGADVN 140
Query: 809 ATTEVREPMLHIACKKNRIKVVELLLK 835
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISINNGNEDLAEILQK 167
Score = 76.3 bits (186), Expect = 1e-13, Method: Composition-based stats.
Identities = 45/147 (30%), Positives = 79/147 (53%)
Query: 722 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 781
A + R V +L+ +GA + A V LH+A +++VE+LLK+GA + A +
Sbjct: 21 AARAGRDDEVRILMANGADVNAADVVGWTPLHLAAYWGHLEIVEVLLKNGADVNAYDTLG 80
Query: 782 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 841
LH+A +++VE+LLK+GA + A + LH+A + +++VE+LLK+GA +
Sbjct: 81 STPLHLAAHFGHLEIVEVLLKNGADVNAKDDNGITPLHLAANRGHLEIVEVLLKYGADVN 140
Query: 842 ATTEVREPMLHIACKKNRIKVVELLLK 868
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISINNGNEDLAEILQK 167
Score = 76.3 bits (186), Expect = 1e-13, Method: Composition-based stats.
Identities = 45/147 (30%), Positives = 79/147 (53%)
Query: 755 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 814
A + R V +L+ +GA + A V LH+A +++VE+LLK+GA + A +
Sbjct: 21 AARAGRDDEVRILMANGADVNAADVVGWTPLHLAAYWGHLEIVEVLLKNGADVNAYDTLG 80
Query: 815 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 874
LH+A +++VE+LLK+GA + A + LH+A + +++VE+LLK+GA +
Sbjct: 81 STPLHLAAHFGHLEIVEVLLKNGADVNAKDDNGITPLHLAANRGHLEIVEVLLKYGADVN 140
Query: 875 ATTEVREPMLHIACKKNRIKVVELLLK 901
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISINNGNEDLAEILQK 167
Score = 76.3 bits (186), Expect = 1e-13, Method: Composition-based stats.
Identities = 45/147 (30%), Positives = 79/147 (53%)
Query: 788 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 847
A + R V +L+ +GA + A V LH+A +++VE+LLK+GA + A +
Sbjct: 21 AARAGRDDEVRILMANGADVNAADVVGWTPLHLAAYWGHLEIVEVLLKNGADVNAYDTLG 80
Query: 848 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 907
LH+A +++VE+LLK+GA + A + LH+A + +++VE+LLK+GA +
Sbjct: 81 STPLHLAAHFGHLEIVEVLLKNGADVNAKDDNGITPLHLAANRGHLEIVEVLLKYGADVN 140
Query: 908 ATTEVREPMLHIACKKNRIKVVELLLK 934
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISINNGNEDLAEILQK 167
Score = 74.7 bits (182), Expect = 4e-13, Method: Composition-based stats.
Identities = 44/146 (30%), Positives = 79/146 (54%)
Query: 821 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 880
A + R V +L+ +GA + A V LH+A +++VE+LLK+GA + A +
Sbjct: 21 AARAGRDDEVRILMANGADVNAADVVGWTPLHLAAYWGHLEIVEVLLKNGADVNAYDTLG 80
Query: 881 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASSH 940
LH+A +++VE+LLK+GA + A + LH+A + +++VE+LLK+GA +
Sbjct: 81 STPLHLAAHFGHLEIVEVLLKNGADVNAKDDNGITPLHLAANRGHLEIVEVLLKYGADVN 140
Query: 941 VVSCYSNVKVHVSLNKIQDVSSSILR 966
+ +S+N + + IL+
Sbjct: 141 AQDKFGKTAFDISINNGNEDLAEILQ 166
Score = 69.7 bits (169), Expect = 1e-11, Method: Composition-based stats.
Identities = 42/138 (30%), Positives = 73/138 (52%), Gaps = 14/138 (10%)
Query: 40 AAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISSKTKVR 99
AA+ G+ + V +L++ GA+++ G T LH AA GH ++E+LL+ GA +++ +
Sbjct: 21 AARAGRDDEVRILMANGADVNAADVVGWTPLHLAAYWGHLEIVEVLLKNGADVNAYDTLG 80
Query: 100 GFYILRSGHEAVIEMLLEQGAPISSKTKVAAVLLENGASLTSTTKKGFTPLHLTGKYGHI 159
+ + H +E + VLL+NGA + + G TPLHL GH+
Sbjct: 81 STPLHLAAHFGHLE--------------IVEVLLKNGADVNAKDDNGITPLHLAANRGHL 126
Query: 160 KVAKLLLQKDAPVDFQGK 177
++ ++LL+ A V+ Q K
Sbjct: 127 EIVEVLLKYGADVNAQDK 144
Score = 65.1 bits (157), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/97 (38%), Positives = 58/97 (59%), Gaps = 5/97 (5%)
Query: 35 TPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISS 94
TPLH+AA WG +V +LL GA+++ G T LH AA GH ++E+LL+ GA +++
Sbjct: 49 TPLHLAAYWGHLEIVEVLLKNGADVNAYDTLGSTPLHLAAHFGHLEIVEVLLKNGADVNA 108
Query: 95 KTKVRGFYILR----SGHEAVIEMLLEQGAPISSKTK 127
K G L GH ++E+LL+ GA ++++ K
Sbjct: 109 KDD-NGITPLHLAANRGHLEIVEVLLKYGADVNAQDK 144
Score = 60.5 bits (145), Expect = 6e-09, Method: Composition-based stats.
Identities = 36/99 (36%), Positives = 60/99 (60%), Gaps = 9/99 (9%)
Query: 20 INTINPFGSHFQHNITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHE 79
+N + GS TPLH+AA +G +V +LL GA+++ K +G+T LH AA GH
Sbjct: 73 VNAYDTLGS------TPLHLAAHFGHLEIVEVLLKNGADVNAKDDNGITPLHLAANRGHL 126
Query: 80 AVIEMLLEQGAPISSKTKV--RGFYI-LRSGHEAVIEML 115
++E+LL+ GA ++++ K F I + +G+E + E+L
Sbjct: 127 EIVEVLLKYGADVNAQDKFGKTAFDISINNGNEDLAEIL 165
>pdb|3Q9U|C Chain C, In Silico And In Vitro Co-Evolution Of A High Affinity
Complementary Protein-Protein Interface
pdb|3Q9U|D Chain D, In Silico And In Vitro Co-Evolution Of A High Affinity
Complementary Protein-Protein Interface
pdb|3Q9N|C Chain C, In Silico And In Vitro Co-Evolution Of A High Affinity
Complementary Protein-Protein Interface
pdb|3Q9N|D Chain D, In Silico And In Vitro Co-Evolution Of A High Affinity
Complementary Protein-Protein Interface
Length = 158
Score = 103 bits (256), Expect = 1e-21, Method: Composition-based stats.
Identities = 59/167 (35%), Positives = 93/167 (55%), Gaps = 13/167 (7%)
Query: 1021 KDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDA 1080
+DL L AA GQ++ +L+ NGA + +T G TPLHL G +++ ++LL+ A
Sbjct: 4 QDLGKKLLEAAAAGQDDEVRILMANGADVNATDDNGLTPLHLAAANGQLEIVEVLLKNGA 63
Query: 1081 PVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLH 1140
V+ G+TPLH+A++ H ++I LL++GA NA AG+TPLH
Sbjct: 64 DVNASDSAGITPLHLAAYDGH-------------LEIVEVLLKHGADVNAYDRAGWTPLH 110
Query: 1141 LSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELL 1187
L+A G ++ +LL+HGADV+ GLT + + + +AE+L
Sbjct: 111 LAALSGQLEIVEVLLKHGADVNAQDALGLTAFDISINQGQEDLAEIL 157
Score = 95.9 bits (237), Expect = 1e-19, Method: Composition-based stats.
Identities = 54/158 (34%), Positives = 88/158 (55%), Gaps = 13/158 (8%)
Query: 997 ASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKG 1056
A+ G D V +L+ +GA V++T + T LH+AA GQ E+ VLL+NGA + ++ G
Sbjct: 13 AAAAGQDDEVRILMANGADVNATDDNGLTPLHLAAANGQLEIVEVLLKNGADVNASDSAG 72
Query: 1057 FTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMD 1116
TPLHL GH+++ ++LL+ A V+ + G TPLH+A+ ++
Sbjct: 73 ITPLHLAAYDGHLEIVEVLLKHGADVNAYDRAGWTPLHLAA-------------LSGQLE 119
Query: 1117 IATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAML 1154
I LL++GA NA+ G T +S ++G D++ +L
Sbjct: 120 IVEVLLKHGADVNAQDALGLTAFDISINQGQEDLAEIL 157
Score = 94.7 bits (234), Expect = 3e-19, Method: Composition-based stats.
Identities = 54/148 (36%), Positives = 82/148 (55%), Gaps = 13/148 (8%)
Query: 1073 KLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAES 1132
++L+ A V+ NG+TPLH+A+ ++I LL+ GA NA
Sbjct: 23 RILMANGADVNATDDNGLTPLHLAA-------------ANGQLEIVEVLLKNGADVNASD 69
Query: 1133 VAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNA 1192
AG TPLHL+A +GH ++ +LL+HGADV+ + G TPLHL A ++ + E+LLK+ A
Sbjct: 70 SAGITPLHLAAYDGHLEIVEVLLKHGADVNAYDRAGWTPLHLAALSGQLEIVEVLLKHGA 129
Query: 1193 QVDTPTKKGFTPLHIACHYGQISMARLL 1220
V+ G T I+ + GQ +A +L
Sbjct: 130 DVNAQDALGLTAFDISINQGQEDLAEIL 157
Score = 89.7 bits (221), Expect = 1e-17, Method: Composition-based stats.
Identities = 50/145 (34%), Positives = 80/145 (55%)
Query: 194 AAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVR 253
AA G + L+ AD NA NG TPLH+A ++++VE+LLK+GA + A+
Sbjct: 13 AAAAGQDDEVRILMANGADVNATDDNGLTPLHLAAANGQLEIVEVLLKNGADVNASDSAG 72
Query: 254 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 313
LH+A +++VE+LLKHGA + A LH+A ++++VE+LLKHGA +
Sbjct: 73 ITPLHLAAYDGHLEIVEVLLKHGADVNAYDRAGWTPLHLAALSGQLEIVEVLLKHGADVN 132
Query: 314 ATTEVREPMLHIACKKNRIKVVELL 338
A + I+ + + + E+L
Sbjct: 133 AQDALGLTAFDISINQGQEDLAEIL 157
Score = 89.0 bits (219), Expect = 2e-17, Method: Composition-based stats.
Identities = 50/128 (39%), Positives = 77/128 (60%), Gaps = 2/128 (1%)
Query: 1102 QNVALLLLEKGASM--DIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGA 1159
Q++ LLE A+ D L+ GA NA G TPLHL+A+ G ++ +LL++GA
Sbjct: 4 QDLGKKLLEAAAAGQDDEVRILMANGADVNATDDNGLTPLHLAAANGQLEIVEVLLKNGA 63
Query: 1160 DVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARL 1219
DV+ + G+TPLHL A + + + E+LLK+ A V+ + G+TPLH+A GQ+ + +
Sbjct: 64 DVNASDSAGITPLHLAAYDGHLEIVEVLLKHGADVNAYDRAGWTPLHLAALSGQLEIVEV 123
Query: 1220 LLDQSANV 1227
LL A+V
Sbjct: 124 LLKHGADV 131
Score = 86.7 bits (213), Expect = 7e-17, Method: Composition-based stats.
Identities = 51/124 (41%), Positives = 68/124 (54%), Gaps = 2/124 (1%)
Query: 1254 TTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATNK-GFTPLHHSAQQGHSTIVALLLDR 1312
T D G TPLH +A G IV +LL GA NA++ G TPLH +A GH IV +LL
Sbjct: 35 TDDNGLTPLHLAAANGQLEIVEVLLKNGADVNASDSAGITPLHLAAYDGHLEIVEVLLKH 94
Query: 1313 GASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTI 1372
GA NA ++ G+TPLH+A GQ+ + +LL A+V+ G T S QG +
Sbjct: 95 GADVNAYDRA-GWTPLHLAALSGQLEIVEVLLKHGADVNAQDALGLTAFDISINQGQEDL 153
Query: 1373 VALL 1376
+L
Sbjct: 154 AEIL 157
Score = 83.6 bits (205), Expect = 6e-16, Method: Composition-based stats.
Identities = 51/127 (40%), Positives = 71/127 (55%), Gaps = 2/127 (1%)
Query: 1262 LHHSAQQGHSTIVALLLDRGASPNATN-KGFTPLHHSAQQGHSTIVALLLDRGASPNATN 1320
L +A G V +L+ GA NAT+ G TPLH +A G IV +LL GA NA++
Sbjct: 10 LLEAAAAGQDDEVRILMANGADVNATDDNGLTPLHLAAANGQLEIVEVLLKNGADVNASD 69
Query: 1321 KTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRG 1380
+ G TPLH+A + G + + +LL A+V+ G+TPLH +A G IV +LL G
Sbjct: 70 -SAGITPLHLAAYDGHLEIVEVLLKHGADVNAYDRAGWTPLHLAALSGQLEIVEVLLKHG 128
Query: 1381 ASPNATN 1387
A NA +
Sbjct: 129 ADVNAQD 135
Score = 80.5 bits (197), Expect = 6e-15, Method: Composition-based stats.
Identities = 45/137 (32%), Positives = 78/137 (56%)
Query: 830 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 889
V +L+ +GA + AT + LH+A ++++VE+LLK+GA + A+ LH+A
Sbjct: 22 VRILMANGADVNATDDNGLTPLHLAAANGQLEIVEVLLKNGADVNASDSAGITPLHLAAY 81
Query: 890 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASSHVVSCYSNVK 949
+++VE+LLKHGA + A LH+A ++++VE+LLKHGA +
Sbjct: 82 DGHLEIVEVLLKHGADVNAYDRAGWTPLHLAALSGQLEIVEVLLKHGADVNAQDALGLTA 141
Query: 950 VHVSLNKIQDVSSSILR 966
+S+N+ Q+ + IL+
Sbjct: 142 FDISINQGQEDLAEILQ 158
Score = 80.1 bits (196), Expect = 8e-15, Method: Composition-based stats.
Identities = 44/136 (32%), Positives = 77/136 (56%)
Query: 236 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 295
V +L+ +GA + AT + LH+A ++++VE+LLK+GA + A+ LH+A
Sbjct: 22 VRILMANGADVNATDDNGLTPLHLAAANGQLEIVEVLLKNGADVNASDSAGITPLHLAAY 81
Query: 296 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 355
+++VE+LLKHGA + A LH+A ++++VE+LLKHGA + A +
Sbjct: 82 DGHLEIVEVLLKHGADVNAYDRAGWTPLHLAALSGQLEIVEVLLKHGADVNAQDALGLTA 141
Query: 356 LHIACKKNRIKVVELL 371
I+ + + + E+L
Sbjct: 142 FDISINQGQEDLAEIL 157
Score = 80.1 bits (196), Expect = 8e-15, Method: Composition-based stats.
Identities = 44/136 (32%), Positives = 77/136 (56%)
Query: 269 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 328
V +L+ +GA + AT + LH+A ++++VE+LLK+GA + A+ LH+A
Sbjct: 22 VRILMANGADVNATDDNGLTPLHLAAANGQLEIVEVLLKNGADVNASDSAGITPLHLAAY 81
Query: 329 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 388
+++VE+LLKHGA + A LH+A ++++VE+LLKHGA + A +
Sbjct: 82 DGHLEIVEVLLKHGADVNAYDRAGWTPLHLAALSGQLEIVEVLLKHGADVNAQDALGLTA 141
Query: 389 LHIACKKNRIKVVELL 404
I+ + + + E+L
Sbjct: 142 FDISINQGQEDLAEIL 157
Score = 80.1 bits (196), Expect = 8e-15, Method: Composition-based stats.
Identities = 44/136 (32%), Positives = 77/136 (56%)
Query: 302 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 361
V +L+ +GA + AT + LH+A ++++VE+LLK+GA + A+ LH+A
Sbjct: 22 VRILMANGADVNATDDNGLTPLHLAAANGQLEIVEVLLKNGADVNASDSAGITPLHLAAY 81
Query: 362 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 421
+++VE+LLKHGA + A LH+A ++++VE+LLKHGA + A +
Sbjct: 82 DGHLEIVEVLLKHGADVNAYDRAGWTPLHLAALSGQLEIVEVLLKHGADVNAQDALGLTA 141
Query: 422 LHIACKKNRIKVVELL 437
I+ + + + E+L
Sbjct: 142 FDISINQGQEDLAEIL 157
Score = 80.1 bits (196), Expect = 8e-15, Method: Composition-based stats.
Identities = 44/136 (32%), Positives = 77/136 (56%)
Query: 335 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 394
V +L+ +GA + AT + LH+A ++++VE+LLK+GA + A+ LH+A
Sbjct: 22 VRILMANGADVNATDDNGLTPLHLAAANGQLEIVEVLLKNGADVNASDSAGITPLHLAAY 81
Query: 395 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 454
+++VE+LLKHGA + A LH+A ++++VE+LLKHGA + A +
Sbjct: 82 DGHLEIVEVLLKHGADVNAYDRAGWTPLHLAALSGQLEIVEVLLKHGADVNAQDALGLTA 141
Query: 455 LHIACKKNRIKVVELL 470
I+ + + + E+L
Sbjct: 142 FDISINQGQEDLAEIL 157
Score = 80.1 bits (196), Expect = 8e-15, Method: Composition-based stats.
Identities = 44/136 (32%), Positives = 77/136 (56%)
Query: 368 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 427
V +L+ +GA + AT + LH+A ++++VE+LLK+GA + A+ LH+A
Sbjct: 22 VRILMANGADVNATDDNGLTPLHLAAANGQLEIVEVLLKNGADVNASDSAGITPLHLAAY 81
Query: 428 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 487
+++VE+LLKHGA + A LH+A ++++VE+LLKHGA + A +
Sbjct: 82 DGHLEIVEVLLKHGADVNAYDRAGWTPLHLAALSGQLEIVEVLLKHGADVNAQDALGLTA 141
Query: 488 LHIACKKNRIKVVELL 503
I+ + + + E+L
Sbjct: 142 FDISINQGQEDLAEIL 157
Score = 80.1 bits (196), Expect = 8e-15, Method: Composition-based stats.
Identities = 44/136 (32%), Positives = 77/136 (56%)
Query: 401 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 460
V +L+ +GA + AT + LH+A ++++VE+LLK+GA + A+ LH+A
Sbjct: 22 VRILMANGADVNATDDNGLTPLHLAAANGQLEIVEVLLKNGADVNASDSAGITPLHLAAY 81
Query: 461 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 520
+++VE+LLKHGA + A LH+A ++++VE+LLKHGA + A +
Sbjct: 82 DGHLEIVEVLLKHGADVNAYDRAGWTPLHLAALSGQLEIVEVLLKHGADVNAQDALGLTA 141
Query: 521 LHIACKKNRIKVVELL 536
I+ + + + E+L
Sbjct: 142 FDISINQGQEDLAEIL 157
Score = 80.1 bits (196), Expect = 8e-15, Method: Composition-based stats.
Identities = 44/136 (32%), Positives = 77/136 (56%)
Query: 434 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 493
V +L+ +GA + AT + LH+A ++++VE+LLK+GA + A+ LH+A
Sbjct: 22 VRILMANGADVNATDDNGLTPLHLAAANGQLEIVEVLLKNGADVNASDSAGITPLHLAAY 81
Query: 494 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 553
+++VE+LLKHGA + A LH+A ++++VE+LLKHGA + A +
Sbjct: 82 DGHLEIVEVLLKHGADVNAYDRAGWTPLHLAALSGQLEIVEVLLKHGADVNAQDALGLTA 141
Query: 554 LHIACKKNRIKVVELL 569
I+ + + + E+L
Sbjct: 142 FDISINQGQEDLAEIL 157
Score = 80.1 bits (196), Expect = 8e-15, Method: Composition-based stats.
Identities = 44/136 (32%), Positives = 77/136 (56%)
Query: 467 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 526
V +L+ +GA + AT + LH+A ++++VE+LLK+GA + A+ LH+A
Sbjct: 22 VRILMANGADVNATDDNGLTPLHLAAANGQLEIVEVLLKNGADVNASDSAGITPLHLAAY 81
Query: 527 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 586
+++VE+LLKHGA + A LH+A ++++VE+LLKHGA + A +
Sbjct: 82 DGHLEIVEVLLKHGADVNAYDRAGWTPLHLAALSGQLEIVEVLLKHGADVNAQDALGLTA 141
Query: 587 LHIACKKNRIKVVELL 602
I+ + + + E+L
Sbjct: 142 FDISINQGQEDLAEIL 157
Score = 80.1 bits (196), Expect = 8e-15, Method: Composition-based stats.
Identities = 44/136 (32%), Positives = 77/136 (56%)
Query: 500 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 559
V +L+ +GA + AT + LH+A ++++VE+LLK+GA + A+ LH+A
Sbjct: 22 VRILMANGADVNATDDNGLTPLHLAAANGQLEIVEVLLKNGADVNASDSAGITPLHLAAY 81
Query: 560 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 619
+++VE+LLKHGA + A LH+A ++++VE+LLKHGA + A +
Sbjct: 82 DGHLEIVEVLLKHGADVNAYDRAGWTPLHLAALSGQLEIVEVLLKHGADVNAQDALGLTA 141
Query: 620 LHIACKKNRIKVVELL 635
I+ + + + E+L
Sbjct: 142 FDISINQGQEDLAEIL 157
Score = 80.1 bits (196), Expect = 8e-15, Method: Composition-based stats.
Identities = 44/136 (32%), Positives = 77/136 (56%)
Query: 533 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 592
V +L+ +GA + AT + LH+A ++++VE+LLK+GA + A+ LH+A
Sbjct: 22 VRILMANGADVNATDDNGLTPLHLAAANGQLEIVEVLLKNGADVNASDSAGITPLHLAAY 81
Query: 593 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 652
+++VE+LLKHGA + A LH+A ++++VE+LLKHGA + A +
Sbjct: 82 DGHLEIVEVLLKHGADVNAYDRAGWTPLHLAALSGQLEIVEVLLKHGADVNAQDALGLTA 141
Query: 653 LHIACKKNRIKVVELL 668
I+ + + + E+L
Sbjct: 142 FDISINQGQEDLAEIL 157
Score = 80.1 bits (196), Expect = 8e-15, Method: Composition-based stats.
Identities = 44/136 (32%), Positives = 77/136 (56%)
Query: 566 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 625
V +L+ +GA + AT + LH+A ++++VE+LLK+GA + A+ LH+A
Sbjct: 22 VRILMANGADVNATDDNGLTPLHLAAANGQLEIVEVLLKNGADVNASDSAGITPLHLAAY 81
Query: 626 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 685
+++VE+LLKHGA + A LH+A ++++VE+LLKHGA + A +
Sbjct: 82 DGHLEIVEVLLKHGADVNAYDRAGWTPLHLAALSGQLEIVEVLLKHGADVNAQDALGLTA 141
Query: 686 LHIACKKNRIKVVELL 701
I+ + + + E+L
Sbjct: 142 FDISINQGQEDLAEIL 157
Score = 80.1 bits (196), Expect = 8e-15, Method: Composition-based stats.
Identities = 44/136 (32%), Positives = 77/136 (56%)
Query: 599 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 658
V +L+ +GA + AT + LH+A ++++VE+LLK+GA + A+ LH+A
Sbjct: 22 VRILMANGADVNATDDNGLTPLHLAAANGQLEIVEVLLKNGADVNASDSAGITPLHLAAY 81
Query: 659 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 718
+++VE+LLKHGA + A LH+A ++++VE+LLKHGA + A +
Sbjct: 82 DGHLEIVEVLLKHGADVNAYDRAGWTPLHLAALSGQLEIVEVLLKHGADVNAQDALGLTA 141
Query: 719 LHIACKKNRIKVVELL 734
I+ + + + E+L
Sbjct: 142 FDISINQGQEDLAEIL 157
Score = 80.1 bits (196), Expect = 8e-15, Method: Composition-based stats.
Identities = 44/136 (32%), Positives = 77/136 (56%)
Query: 632 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 691
V +L+ +GA + AT + LH+A ++++VE+LLK+GA + A+ LH+A
Sbjct: 22 VRILMANGADVNATDDNGLTPLHLAAANGQLEIVEVLLKNGADVNASDSAGITPLHLAAY 81
Query: 692 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 751
+++VE+LLKHGA + A LH+A ++++VE+LLKHGA + A +
Sbjct: 82 DGHLEIVEVLLKHGADVNAYDRAGWTPLHLAALSGQLEIVEVLLKHGADVNAQDALGLTA 141
Query: 752 LHIACKKNRIKVVELL 767
I+ + + + E+L
Sbjct: 142 FDISINQGQEDLAEIL 157
Score = 80.1 bits (196), Expect = 8e-15, Method: Composition-based stats.
Identities = 44/136 (32%), Positives = 77/136 (56%)
Query: 665 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 724
V +L+ +GA + AT + LH+A ++++VE+LLK+GA + A+ LH+A
Sbjct: 22 VRILMANGADVNATDDNGLTPLHLAAANGQLEIVEVLLKNGADVNASDSAGITPLHLAAY 81
Query: 725 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 784
+++VE+LLKHGA + A LH+A ++++VE+LLKHGA + A +
Sbjct: 82 DGHLEIVEVLLKHGADVNAYDRAGWTPLHLAALSGQLEIVEVLLKHGADVNAQDALGLTA 141
Query: 785 LHIACKKNRIKVVELL 800
I+ + + + E+L
Sbjct: 142 FDISINQGQEDLAEIL 157
Score = 80.1 bits (196), Expect = 8e-15, Method: Composition-based stats.
Identities = 44/136 (32%), Positives = 77/136 (56%)
Query: 698 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 757
V +L+ +GA + AT + LH+A ++++VE+LLK+GA + A+ LH+A
Sbjct: 22 VRILMANGADVNATDDNGLTPLHLAAANGQLEIVEVLLKNGADVNASDSAGITPLHLAAY 81
Query: 758 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 817
+++VE+LLKHGA + A LH+A ++++VE+LLKHGA + A +
Sbjct: 82 DGHLEIVEVLLKHGADVNAYDRAGWTPLHLAALSGQLEIVEVLLKHGADVNAQDALGLTA 141
Query: 818 LHIACKKNRIKVVELL 833
I+ + + + E+L
Sbjct: 142 FDISINQGQEDLAEIL 157
Score = 80.1 bits (196), Expect = 8e-15, Method: Composition-based stats.
Identities = 44/136 (32%), Positives = 77/136 (56%)
Query: 731 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 790
V +L+ +GA + AT + LH+A ++++VE+LLK+GA + A+ LH+A
Sbjct: 22 VRILMANGADVNATDDNGLTPLHLAAANGQLEIVEVLLKNGADVNASDSAGITPLHLAAY 81
Query: 791 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 850
+++VE+LLKHGA + A LH+A ++++VE+LLKHGA + A +
Sbjct: 82 DGHLEIVEVLLKHGADVNAYDRAGWTPLHLAALSGQLEIVEVLLKHGADVNAQDALGLTA 141
Query: 851 LHIACKKNRIKVVELL 866
I+ + + + E+L
Sbjct: 142 FDISINQGQEDLAEIL 157
Score = 80.1 bits (196), Expect = 8e-15, Method: Composition-based stats.
Identities = 44/136 (32%), Positives = 77/136 (56%)
Query: 764 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 823
V +L+ +GA + AT + LH+A ++++VE+LLK+GA + A+ LH+A
Sbjct: 22 VRILMANGADVNATDDNGLTPLHLAAANGQLEIVEVLLKNGADVNASDSAGITPLHLAAY 81
Query: 824 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 883
+++VE+LLKHGA + A LH+A ++++VE+LLKHGA + A +
Sbjct: 82 DGHLEIVEVLLKHGADVNAYDRAGWTPLHLAALSGQLEIVEVLLKHGADVNAQDALGLTA 141
Query: 884 LHIACKKNRIKVVELL 899
I+ + + + E+L
Sbjct: 142 FDISINQGQEDLAEIL 157
Score = 80.1 bits (196), Expect = 8e-15, Method: Composition-based stats.
Identities = 44/136 (32%), Positives = 77/136 (56%)
Query: 797 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 856
V +L+ +GA + AT + LH+A ++++VE+LLK+GA + A+ LH+A
Sbjct: 22 VRILMANGADVNATDDNGLTPLHLAAANGQLEIVEVLLKNGADVNASDSAGITPLHLAAY 81
Query: 857 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 916
+++VE+LLKHGA + A LH+A ++++VE+LLKHGA + A +
Sbjct: 82 DGHLEIVEVLLKHGADVNAYDRAGWTPLHLAALSGQLEIVEVLLKHGADVNAQDALGLTA 141
Query: 917 LHIACKKNRIKVVELL 932
I+ + + + E+L
Sbjct: 142 FDISINQGQEDLAEIL 157
Score = 79.7 bits (195), Expect = 1e-14, Method: Composition-based stats.
Identities = 41/117 (35%), Positives = 75/117 (64%)
Query: 992 TPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTS 1051
TPLH+A+ G ++IV +LL++GA V+++ T LH+AA +G E+ VLL++GA + +
Sbjct: 41 TPLHLAAANGQLEIVEVLLKNGADVNASDSAGITPLHLAAYDGHLEIVEVLLKHGADVNA 100
Query: 1052 TTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLL 1108
+ G+TPLHL G +++ ++LL+ A V+ Q G+T ++ + +++A +L
Sbjct: 101 YDRAGWTPLHLAALSGQLEIVEVLLKHGADVNAQDALGLTAFDISINQGQEDLAEIL 157
Score = 77.8 bits (190), Expect = 4e-14, Method: Composition-based stats.
Identities = 43/118 (36%), Positives = 65/118 (55%)
Query: 188 LTALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIE 247
LT LH+AA G + + LL AD NA G TPLH+A +++VE+LLKHGA +
Sbjct: 40 LTPLHLAAANGQLEIVEVLLKNGADVNASDSAGITPLHLAAYDGHLEIVEVLLKHGADVN 99
Query: 248 ATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 305
A LH+A ++++VE+LLKHGA + A + I+ + + + E+L
Sbjct: 100 AYDRAGWTPLHLAALSGQLEIVEVLLKHGADVNAQDALGLTAFDISINQGQEDLAEIL 157
Score = 74.7 bits (182), Expect = 3e-13, Method: Composition-based stats.
Identities = 53/180 (29%), Positives = 86/180 (47%), Gaps = 44/180 (24%)
Query: 863 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 922
V +L+ +GA + AT + LH+A ++++VE+LLK+GA + A+ LH+A
Sbjct: 22 VRILMANGADVNATDDNGLTPLHLAAANGQLEIVEVLLKNGADVNASDSAGITPLHLAAY 81
Query: 923 KNRIKVVELLLKHGASSHVVSCYSNVKVHVSLNKIQDVSSSILRLATCDVLPQCETRLNF 982
+++VE+LLKHGA V+ Y
Sbjct: 82 DGHLEIVEVLLKHGAD---VNAYD------------------------------------ 102
Query: 983 SNLRVREQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVL 1042
R TPLH+A+ G ++IV +LL+HGA V++ TA I+ +GQE++A +L
Sbjct: 103 -----RAGWTPLHLAALSGQLEIVEVLLKHGADVNAQDALGLTAFDISINQGQEDLAEIL 157
Score = 67.0 bits (162), Expect = 7e-11, Method: Composition-based stats.
Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Query: 1294 LHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCT 1353
L +A G V +L+ GA NAT+ G TPLH+A GQ+ + +LL A+V+ +
Sbjct: 10 LLEAAAAGQDDEVRILMANGADVNATDDN-GLTPLHLAAANGQLEIVEVLLKNGADVNAS 68
Query: 1354 TDQGFTPLHHSAQQGHSTIVALLLDRGASPNATNK 1388
G TPLH +A GH IV +LL GA NA ++
Sbjct: 69 DSAGITPLHLAAYDGHLEIVEVLLKHGADVNAYDR 103
Score = 66.2 bits (160), Expect = 1e-10, Method: Composition-based stats.
Identities = 52/200 (26%), Positives = 85/200 (42%), Gaps = 55/200 (27%)
Query: 40 AAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISSKTKVR 99
AA G+ + V +L++ GA+++ +GLT LH AA +G ++E
Sbjct: 13 AAAAGQDDEVRILMANGADVNATDDNGLTPLHLAAANGQLEIVE---------------- 56
Query: 100 GFYILRSGHEAVIEMLLEQGAPISSKTKVAAVLLENGASLTSTTKKGFTPLHLTGKYGHI 159
VLL+NGA + ++ G TPLHL GH+
Sbjct: 57 -------------------------------VLLKNGADVNASDSAGITPLHLAAYDGHL 85
Query: 160 KVAKLLLQKDAPVDFQGKAPVDDVTVDYLTALHVAAHCGHARVAKTLLDKKADPNARALN 219
++ ++LL+ A V+ +A T LH+AA G + + LL AD NA+
Sbjct: 86 EIVEVLLKHGADVNAYDRAG--------WTPLHLAALSGQLEIVEVLLKHGADVNAQDAL 137
Query: 220 GFTPLHIACKKNRIKVVELL 239
G T I+ + + + E+L
Sbjct: 138 GLTAFDISINQGQEDLAEIL 157
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/98 (34%), Positives = 61/98 (62%), Gaps = 5/98 (5%)
Query: 32 HNITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAP 91
+ +TPLH+AA G+ +V +LL GA+++ G+T LH AA GH ++E+LL+ GA
Sbjct: 38 NGLTPLHLAAANGQLEIVEVLLKNGADVNASDSAGITPLHLAAYDGHLEIVEVLLKHGAD 97
Query: 92 ISSKTKVRGFYILR----SGHEAVIEMLLEQGAPISSK 125
+++ + G+ L SG ++E+LL+ GA ++++
Sbjct: 98 VNAYDRA-GWTPLHLAALSGQLEIVEVLLKHGADVNAQ 134
Score = 39.3 bits (90), Expect = 0.015, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 35 TPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEML 85
TPLH+AA G+ +V +LL GA+++ + GLTA + G E + E+L
Sbjct: 107 TPLHLAALSGQLEIVEVLLKHGADVNAQDALGLTAFDISINQGQEDLAEIL 157
>pdb|4GPM|A Chain A, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or264.
pdb|4GPM|B Chain B, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or264
Length = 169
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 80/131 (61%), Gaps = 3/131 (2%)
Query: 1253 NTTD-QGFTPLHHSAQQGHSTIVALLLDRGASPNATN-KGFTPLHHSAQQGHSTIVALLL 1310
N +D G TPLHH+A+ GH +V LL+ +GA NA + G TPLHH+A+ GH +V LL+
Sbjct: 31 NASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLI 90
Query: 1311 DRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHS 1370
+GA NA + + G TPLH A G + +LL+ + A+V+ + G TPL + + G+
Sbjct: 91 SKGADVNAKD-SDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNE 149
Query: 1371 TIVALLLDRGA 1381
+V LL +G
Sbjct: 150 EVVKLLEKQGG 160
Score = 99.8 bits (247), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 77/124 (62%), Gaps = 2/124 (1%)
Query: 1265 SAQQGHSTIVALLLDRGASPNATN-KGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTR 1323
+A+ G+ V L++ GA NA++ G TPLHH+A+ GH +V LL+ +GA NA + +
Sbjct: 11 AAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKD-SD 69
Query: 1324 GFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGASP 1383
G TPLH A G + +LL+ + A+V+ G TPLHH+A+ GH +V LL+ +GA
Sbjct: 70 GRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADV 129
Query: 1384 NATN 1387
N ++
Sbjct: 130 NTSD 133
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 87/160 (54%), Gaps = 13/160 (8%)
Query: 1030 AAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNG 1089
AA+ G ++ L+ENGA + ++ G TPLH + GH +V KLL+ K A V+ + +G
Sbjct: 11 AAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDG 70
Query: 1090 VTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHAD 1149
TPLH A+ H+ V LL+ KGA + NA+ G TPLH +A GH +
Sbjct: 71 RTPLHHAAENGHKEVVKLLISKGADV-------------NAKDSDGRTPLHHAAENGHKE 117
Query: 1150 MSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLK 1189
+ +L+ GADV+ + +G TPL L + V +LL K
Sbjct: 118 VVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEK 157
Score = 91.3 bits (225), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 86/163 (52%), Gaps = 13/163 (7%)
Query: 997 ASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKG 1056
A+ GN D V L+++GA V+++ D T LH AA+ G +EV +L+ GA + + G
Sbjct: 11 AAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDG 70
Query: 1057 FTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMD 1116
TPLH + GH +V KLL+ K A V+ + +G TPLH A+ H+ V LL+ KGA +
Sbjct: 71 RTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADV- 129
Query: 1117 IATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGA 1159
N G TPL L+ G+ ++ +L + G
Sbjct: 130 ------------NTSDSDGRTPLDLAREHGNEEVVKLLEKQGG 160
Score = 84.3 bits (207), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 76/133 (57%)
Query: 984 NLRVREQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLL 1043
N + +TPLH A+ G+ ++V LL+ GA V++ D T LH AA+ G +EV +L+
Sbjct: 31 NASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLI 90
Query: 1044 ENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQN 1103
GA + + G TPLH + GH +V KLL+ K A V+ +G TPL +A + ++
Sbjct: 91 SKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEE 150
Query: 1104 VALLLLEKGASMD 1116
V LL ++G ++
Sbjct: 151 VVKLLEKQGGWLE 163
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 78/171 (45%), Gaps = 26/171 (15%)
Query: 1113 ASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPL 1172
+ D L+E GA NA G TPLH +A GH ++ +L+ GADV+ +G TPL
Sbjct: 15 GNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPL 74
Query: 1173 HLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKN 1232
H A+ V +LL+ A V+ G TPLH A G + +LL+ + A+V
Sbjct: 75 HHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADV----- 129
Query: 1233 FPSRXXXXXXXXXXXXXXYTNTTD-QGFTPLHHSAQQGHSTIVALLLDRGA 1282
NT+D G TPL + + G+ +V LL +G
Sbjct: 130 --------------------NTSDSDGRTPLDLAREHGNEEVVKLLEKQGG 160
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 78/134 (58%), Gaps = 20/134 (14%)
Query: 35 TPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISS 94
TPLH AA+ G +V LL+S+GA+++ K DG T LH AA +GH+ V+++L+ +GA +++
Sbjct: 39 TPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNA 98
Query: 95 KT---KVRGFYILRSGHEAVIEMLLEQGAPISSKTKVAAVLLENGASLTSTTKKGFTPLH 151
K + + +GH+ V+++L+ +GA ++ ++ G TPL
Sbjct: 99 KDSDGRTPLHHAAENGHKEVVKLLISKGADVN-----------------TSDSDGRTPLD 141
Query: 152 LTGKYGHIKVAKLL 165
L ++G+ +V KLL
Sbjct: 142 LAREHGNEEVVKLL 155
Score = 73.9 bits (180), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 23/148 (15%)
Query: 40 AAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISSKT--- 96
AA+ G + V L+ GA+++ DG T LH AA +GH+ V+++L+ +GA +++K
Sbjct: 11 AAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDG 70
Query: 97 KVRGFYILRSGHEAVIEMLLEQGAPISSKTKVAAVLLENGASLTSTTKKGFTPLHLTGKY 156
+ + +GH+ V+++L+ +GA +++K G TPLH +
Sbjct: 71 RTPLHHAAENGHKEVVKLLISKGADVNAK-----------------DSDGRTPLHHAAEN 113
Query: 157 GHIKVAKLLLQKDAPV---DFQGKAPVD 181
GH +V KLL+ K A V D G+ P+D
Sbjct: 114 GHKEVVKLLISKGADVNTSDSDGRTPLD 141
Score = 73.2 bits (178), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 74/141 (52%), Gaps = 2/141 (1%)
Query: 174 FQGKAPVDDVTVDYLTALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRI 233
+ A V+ D T LH AA GH V K L+ K AD NA+ +G TPLH A +
Sbjct: 24 IENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHK 83
Query: 234 KVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHI 292
+VV+LL+ GA + A ++ R P LH A + +VV+LL+ GA + + L +
Sbjct: 84 EVVKLLISKGADVNAKDSDGRTP-LHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDL 142
Query: 293 ACKKNRIKVVELLLKHGASIE 313
A + +VV+LL K G +E
Sbjct: 143 AREHGNEEVVKLLEKQGGWLE 163
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 92/166 (55%), Gaps = 7/166 (4%)
Query: 250 TEVREPMLHIACKKNRIKVVELLLKHGASIEAT-TEVREPMLHIACKKNRIKVVELLLKH 308
+E+ + ++ A N+ +V +L+ ++GA + A+ ++ R P LH A + +VV+LL+
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLI-ENGADVNASDSDGRTP-LHHAAENGHKEVVKLLISK 59
Query: 309 GASIEA-TTEVREPMLHIACKKNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIK 366
GA + A ++ R P LH A + +VV+LL+ GA + A ++ R P LH A + +
Sbjct: 60 GADVNAKDSDGRTP-LHHAAENGHKEVVKLLISKGADVNAKDSDGRTP-LHHAAENGHKE 117
Query: 367 VVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 412
VV+LL+ GA + + L +A + +VV+LL K G +E
Sbjct: 118 VVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLE 163
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 92/166 (55%), Gaps = 7/166 (4%)
Query: 283 TEVREPMLHIACKKNRIKVVELLLKHGASIEAT-TEVREPMLHIACKKNRIKVVELLLKH 341
+E+ + ++ A N+ +V +L+ ++GA + A+ ++ R P LH A + +VV+LL+
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLI-ENGADVNASDSDGRTP-LHHAAENGHKEVVKLLISK 59
Query: 342 GASIEA-TTEVREPMLHIACKKNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIK 399
GA + A ++ R P LH A + +VV+LL+ GA + A ++ R P LH A + +
Sbjct: 60 GADVNAKDSDGRTP-LHHAAENGHKEVVKLLISKGADVNAKDSDGRTP-LHHAAENGHKE 117
Query: 400 VVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 445
VV+LL+ GA + + L +A + +VV+LL K G +E
Sbjct: 118 VVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLE 163
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 92/166 (55%), Gaps = 7/166 (4%)
Query: 316 TEVREPMLHIACKKNRIKVVELLLKHGASIEAT-TEVREPMLHIACKKNRIKVVELLLKH 374
+E+ + ++ A N+ +V +L+ ++GA + A+ ++ R P LH A + +VV+LL+
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLI-ENGADVNASDSDGRTP-LHHAAENGHKEVVKLLISK 59
Query: 375 GASIEA-TTEVREPMLHIACKKNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIK 432
GA + A ++ R P LH A + +VV+LL+ GA + A ++ R P LH A + +
Sbjct: 60 GADVNAKDSDGRTP-LHHAAENGHKEVVKLLISKGADVNAKDSDGRTP-LHHAAENGHKE 117
Query: 433 VVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 478
VV+LL+ GA + + L +A + +VV+LL K G +E
Sbjct: 118 VVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLE 163
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 92/166 (55%), Gaps = 7/166 (4%)
Query: 349 TEVREPMLHIACKKNRIKVVELLLKHGASIEAT-TEVREPMLHIACKKNRIKVVELLLKH 407
+E+ + ++ A N+ +V +L+ ++GA + A+ ++ R P LH A + +VV+LL+
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLI-ENGADVNASDSDGRTP-LHHAAENGHKEVVKLLISK 59
Query: 408 GASIEA-TTEVREPMLHIACKKNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIK 465
GA + A ++ R P LH A + +VV+LL+ GA + A ++ R P LH A + +
Sbjct: 60 GADVNAKDSDGRTP-LHHAAENGHKEVVKLLISKGADVNAKDSDGRTP-LHHAAENGHKE 117
Query: 466 VVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 511
VV+LL+ GA + + L +A + +VV+LL K G +E
Sbjct: 118 VVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLE 163
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 92/166 (55%), Gaps = 7/166 (4%)
Query: 382 TEVREPMLHIACKKNRIKVVELLLKHGASIEAT-TEVREPMLHIACKKNRIKVVELLLKH 440
+E+ + ++ A N+ +V +L+ ++GA + A+ ++ R P LH A + +VV+LL+
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLI-ENGADVNASDSDGRTP-LHHAAENGHKEVVKLLISK 59
Query: 441 GASIEA-TTEVREPMLHIACKKNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIK 498
GA + A ++ R P LH A + +VV+LL+ GA + A ++ R P LH A + +
Sbjct: 60 GADVNAKDSDGRTP-LHHAAENGHKEVVKLLISKGADVNAKDSDGRTP-LHHAAENGHKE 117
Query: 499 VVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 544
VV+LL+ GA + + L +A + +VV+LL K G +E
Sbjct: 118 VVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLE 163
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 92/166 (55%), Gaps = 7/166 (4%)
Query: 415 TEVREPMLHIACKKNRIKVVELLLKHGASIEAT-TEVREPMLHIACKKNRIKVVELLLKH 473
+E+ + ++ A N+ +V +L+ ++GA + A+ ++ R P LH A + +VV+LL+
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLI-ENGADVNASDSDGRTP-LHHAAENGHKEVVKLLISK 59
Query: 474 GASIEA-TTEVREPMLHIACKKNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIK 531
GA + A ++ R P LH A + +VV+LL+ GA + A ++ R P LH A + +
Sbjct: 60 GADVNAKDSDGRTP-LHHAAENGHKEVVKLLISKGADVNAKDSDGRTP-LHHAAENGHKE 117
Query: 532 VVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 577
VV+LL+ GA + + L +A + +VV+LL K G +E
Sbjct: 118 VVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLE 163
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 92/166 (55%), Gaps = 7/166 (4%)
Query: 448 TEVREPMLHIACKKNRIKVVELLLKHGASIEAT-TEVREPMLHIACKKNRIKVVELLLKH 506
+E+ + ++ A N+ +V +L+ ++GA + A+ ++ R P LH A + +VV+LL+
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLI-ENGADVNASDSDGRTP-LHHAAENGHKEVVKLLISK 59
Query: 507 GASIEA-TTEVREPMLHIACKKNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIK 564
GA + A ++ R P LH A + +VV+LL+ GA + A ++ R P LH A + +
Sbjct: 60 GADVNAKDSDGRTP-LHHAAENGHKEVVKLLISKGADVNAKDSDGRTP-LHHAAENGHKE 117
Query: 565 VVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 610
VV+LL+ GA + + L +A + +VV+LL K G +E
Sbjct: 118 VVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLE 163
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 92/166 (55%), Gaps = 7/166 (4%)
Query: 481 TEVREPMLHIACKKNRIKVVELLLKHGASIEAT-TEVREPMLHIACKKNRIKVVELLLKH 539
+E+ + ++ A N+ +V +L+ ++GA + A+ ++ R P LH A + +VV+LL+
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLI-ENGADVNASDSDGRTP-LHHAAENGHKEVVKLLISK 59
Query: 540 GASIEA-TTEVREPMLHIACKKNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIK 597
GA + A ++ R P LH A + +VV+LL+ GA + A ++ R P LH A + +
Sbjct: 60 GADVNAKDSDGRTP-LHHAAENGHKEVVKLLISKGADVNAKDSDGRTP-LHHAAENGHKE 117
Query: 598 VVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 643
VV+LL+ GA + + L +A + +VV+LL K G +E
Sbjct: 118 VVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLE 163
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 92/166 (55%), Gaps = 7/166 (4%)
Query: 514 TEVREPMLHIACKKNRIKVVELLLKHGASIEAT-TEVREPMLHIACKKNRIKVVELLLKH 572
+E+ + ++ A N+ +V +L+ ++GA + A+ ++ R P LH A + +VV+LL+
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLI-ENGADVNASDSDGRTP-LHHAAENGHKEVVKLLISK 59
Query: 573 GASIEA-TTEVREPMLHIACKKNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIK 630
GA + A ++ R P LH A + +VV+LL+ GA + A ++ R P LH A + +
Sbjct: 60 GADVNAKDSDGRTP-LHHAAENGHKEVVKLLISKGADVNAKDSDGRTP-LHHAAENGHKE 117
Query: 631 VVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 676
VV+LL+ GA + + L +A + +VV+LL K G +E
Sbjct: 118 VVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLE 163
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 92/166 (55%), Gaps = 7/166 (4%)
Query: 547 TEVREPMLHIACKKNRIKVVELLLKHGASIEAT-TEVREPMLHIACKKNRIKVVELLLKH 605
+E+ + ++ A N+ +V +L+ ++GA + A+ ++ R P LH A + +VV+LL+
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLI-ENGADVNASDSDGRTP-LHHAAENGHKEVVKLLISK 59
Query: 606 GASIEA-TTEVREPMLHIACKKNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIK 663
GA + A ++ R P LH A + +VV+LL+ GA + A ++ R P LH A + +
Sbjct: 60 GADVNAKDSDGRTP-LHHAAENGHKEVVKLLISKGADVNAKDSDGRTP-LHHAAENGHKE 117
Query: 664 VVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 709
VV+LL+ GA + + L +A + +VV+LL K G +E
Sbjct: 118 VVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLE 163
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 92/166 (55%), Gaps = 7/166 (4%)
Query: 580 TEVREPMLHIACKKNRIKVVELLLKHGASIEAT-TEVREPMLHIACKKNRIKVVELLLKH 638
+E+ + ++ A N+ +V +L+ ++GA + A+ ++ R P LH A + +VV+LL+
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLI-ENGADVNASDSDGRTP-LHHAAENGHKEVVKLLISK 59
Query: 639 GASIEA-TTEVREPMLHIACKKNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIK 696
GA + A ++ R P LH A + +VV+LL+ GA + A ++ R P LH A + +
Sbjct: 60 GADVNAKDSDGRTP-LHHAAENGHKEVVKLLISKGADVNAKDSDGRTP-LHHAAENGHKE 117
Query: 697 VVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 742
VV+LL+ GA + + L +A + +VV+LL K G +E
Sbjct: 118 VVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLE 163
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 92/166 (55%), Gaps = 7/166 (4%)
Query: 613 TEVREPMLHIACKKNRIKVVELLLKHGASIEAT-TEVREPMLHIACKKNRIKVVELLLKH 671
+E+ + ++ A N+ +V +L+ ++GA + A+ ++ R P LH A + +VV+LL+
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLI-ENGADVNASDSDGRTP-LHHAAENGHKEVVKLLISK 59
Query: 672 GASIEA-TTEVREPMLHIACKKNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIK 729
GA + A ++ R P LH A + +VV+LL+ GA + A ++ R P LH A + +
Sbjct: 60 GADVNAKDSDGRTP-LHHAAENGHKEVVKLLISKGADVNAKDSDGRTP-LHHAAENGHKE 117
Query: 730 VVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 775
VV+LL+ GA + + L +A + +VV+LL K G +E
Sbjct: 118 VVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLE 163
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 92/166 (55%), Gaps = 7/166 (4%)
Query: 646 TEVREPMLHIACKKNRIKVVELLLKHGASIEAT-TEVREPMLHIACKKNRIKVVELLLKH 704
+E+ + ++ A N+ +V +L+ ++GA + A+ ++ R P LH A + +VV+LL+
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLI-ENGADVNASDSDGRTP-LHHAAENGHKEVVKLLISK 59
Query: 705 GASIEA-TTEVREPMLHIACKKNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIK 762
GA + A ++ R P LH A + +VV+LL+ GA + A ++ R P LH A + +
Sbjct: 60 GADVNAKDSDGRTP-LHHAAENGHKEVVKLLISKGADVNAKDSDGRTP-LHHAAENGHKE 117
Query: 763 VVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 808
VV+LL+ GA + + L +A + +VV+LL K G +E
Sbjct: 118 VVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLE 163
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 92/166 (55%), Gaps = 7/166 (4%)
Query: 679 TEVREPMLHIACKKNRIKVVELLLKHGASIEAT-TEVREPMLHIACKKNRIKVVELLLKH 737
+E+ + ++ A N+ +V +L+ ++GA + A+ ++ R P LH A + +VV+LL+
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLI-ENGADVNASDSDGRTP-LHHAAENGHKEVVKLLISK 59
Query: 738 GASIEA-TTEVREPMLHIACKKNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIK 795
GA + A ++ R P LH A + +VV+LL+ GA + A ++ R P LH A + +
Sbjct: 60 GADVNAKDSDGRTP-LHHAAENGHKEVVKLLISKGADVNAKDSDGRTP-LHHAAENGHKE 117
Query: 796 VVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 841
VV+LL+ GA + + L +A + +VV+LL K G +E
Sbjct: 118 VVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLE 163
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 92/166 (55%), Gaps = 7/166 (4%)
Query: 712 TEVREPMLHIACKKNRIKVVELLLKHGASIEAT-TEVREPMLHIACKKNRIKVVELLLKH 770
+E+ + ++ A N+ +V +L+ ++GA + A+ ++ R P LH A + +VV+LL+
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLI-ENGADVNASDSDGRTP-LHHAAENGHKEVVKLLISK 59
Query: 771 GASIEA-TTEVREPMLHIACKKNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIK 828
GA + A ++ R P LH A + +VV+LL+ GA + A ++ R P LH A + +
Sbjct: 60 GADVNAKDSDGRTP-LHHAAENGHKEVVKLLISKGADVNAKDSDGRTP-LHHAAENGHKE 117
Query: 829 VVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 874
VV+LL+ GA + + L +A + +VV+LL K G +E
Sbjct: 118 VVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLE 163
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 92/166 (55%), Gaps = 7/166 (4%)
Query: 745 TEVREPMLHIACKKNRIKVVELLLKHGASIEAT-TEVREPMLHIACKKNRIKVVELLLKH 803
+E+ + ++ A N+ +V +L+ ++GA + A+ ++ R P LH A + +VV+LL+
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLI-ENGADVNASDSDGRTP-LHHAAENGHKEVVKLLISK 59
Query: 804 GASIEA-TTEVREPMLHIACKKNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIK 861
GA + A ++ R P LH A + +VV+LL+ GA + A ++ R P LH A + +
Sbjct: 60 GADVNAKDSDGRTP-LHHAAENGHKEVVKLLISKGADVNAKDSDGRTP-LHHAAENGHKE 117
Query: 862 VVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 907
VV+LL+ GA + + L +A + +VV+LL K G +E
Sbjct: 118 VVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLE 163
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 85/153 (55%), Gaps = 9/153 (5%)
Query: 230 KNRIKVVELLLKHGASIEAT-TEVREPMLHIACKKNRIKVVELLLKHGASIEA-TTEVRE 287
K+R+K L+++GA + A+ ++ R P LH A + +VV+LL+ GA + A ++ R
Sbjct: 17 KDRVKD---LIENGADVNASDSDGRTP-LHHAAENGHKEVVKLLISKGADVNAKDSDGRT 72
Query: 288 PMLHIACKKNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKVVELLLKHGASIE 346
P LH A + +VV+LL+ GA + A ++ R P LH A + +VV+LL+ GA +
Sbjct: 73 P-LHHAAENGHKEVVKLLISKGADVNAKDSDGRTP-LHHAAENGHKEVVKLLISKGADVN 130
Query: 347 ATTEVREPMLHIACKKNRIKVVELLLKHGASIE 379
+ L +A + +VV+LL K G +E
Sbjct: 131 TSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLE 163
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 90/163 (55%), Gaps = 7/163 (4%)
Query: 778 TEVREPMLHIACKKNRIKVVELLLKHGASIEAT-TEVREPMLHIACKKNRIKVVELLLKH 836
+E+ + ++ A N+ +V +L+ ++GA + A+ ++ R P LH A + +VV+LL+
Sbjct: 2 SELGKRLIEAAENGNKDRVKDLI-ENGADVNASDSDGRTP-LHHAAENGHKEVVKLLISK 59
Query: 837 GASIEA-TTEVREPMLHIACKKNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIK 894
GA + A ++ R P LH A + +VV+LL+ GA + A ++ R P LH A + +
Sbjct: 60 GADVNAKDSDGRTP-LHHAAENGHKEVVKLLISKGADVNAKDSDGRTP-LHHAAENGHKE 117
Query: 895 VVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 937
VV+LL+ GA + + L +A + +VV+LL K G
Sbjct: 118 VVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGG 160
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%)
Query: 35 TPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGA 90
TPLH AA+ G +V LL+S+GA+++ DG T L A G+E V+++L +QG
Sbjct: 105 TPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGG 160
>pdb|1SVX|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Maltose Binding Protein
Length = 169
Score = 102 bits (254), Expect = 2e-21, Method: Composition-based stats.
Identities = 61/170 (35%), Positives = 91/170 (53%), Gaps = 13/170 (7%)
Query: 1022 DLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAP 1081
DL L AA+ GQ++ +L+ NGA + + G TPLHL GH+++ ++LL+ A
Sbjct: 13 DLGRKLLEAARAGQDDEVRILMANGADVNAADNTGTTPLHLAAYSGHLEIVEVLLKHGAD 72
Query: 1082 VDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHL 1141
VD G TPLH+A+++ H ++I LL+ GA NA G TPLHL
Sbjct: 73 VDASDVFGYTPLHLAAYWGH-------------LEIVEVLLKNGADVNAMDSDGMTPLHL 119
Query: 1142 SASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNN 1191
+A G+ ++ +LL+HGADV+ K G T + +AE+L K N
Sbjct: 120 AAKWGYLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169
Score = 94.7 bits (234), Expect = 3e-19, Method: Composition-based stats.
Identities = 52/158 (32%), Positives = 90/158 (56%), Gaps = 13/158 (8%)
Query: 997 ASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKG 1056
A+R G D V +L+ +GA V++ T LH+AA G E+ VLL++GA + ++ G
Sbjct: 21 AARAGQDDEVRILMANGADVNAADNTGTTPLHLAAYSGHLEIVEVLLKHGADVDASDVFG 80
Query: 1057 FTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMD 1116
+TPLHL +GH+++ ++LL+ A V+ +G+TPLH+A+ + + ++
Sbjct: 81 YTPLHLAAYWGHLEIVEVLLKNGADVNAMDSDGMTPLHLAAKWGY-------------LE 127
Query: 1117 IATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAML 1154
I LL++GA NA+ G T +S G+ D++ +L
Sbjct: 128 IVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 92.4 bits (228), Expect = 2e-18, Method: Composition-based stats.
Identities = 47/117 (40%), Positives = 77/117 (65%)
Query: 992 TPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTS 1051
TPLH+A+ G+++IV +LL+HGA VD++ YT LH+AA G E+ VLL+NGA + +
Sbjct: 49 TPLHLAAYSGHLEIVEVLLKHGADVDASDVFGYTPLHLAAYWGHLEIVEVLLKNGADVNA 108
Query: 1052 TTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLL 1108
G TPLHL K+G++++ ++LL+ A V+ Q K G T ++ ++++A +L
Sbjct: 109 MDSDGMTPLHLAAKWGYLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 91.7 bits (226), Expect = 3e-18, Method: Composition-based stats.
Identities = 53/157 (33%), Positives = 85/157 (54%), Gaps = 13/157 (8%)
Query: 1064 GKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLE 1123
+ G ++L+ A V+ G TPLH+A++ H ++I LL+
Sbjct: 22 ARAGQDDEVRILMANGADVNAADNTGTTPLHLAAYSGH-------------LEIVEVLLK 68
Query: 1124 YGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGV 1183
+GA +A V G+TPLHL+A GH ++ +LL++GADV+ +G+TPLHL A+ + +
Sbjct: 69 HGADVDASDVFGYTPLHLAAYWGHLEIVEVLLKNGADVNAMDSDGMTPLHLAAKWGYLEI 128
Query: 1184 AELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLL 1220
E+LLK+ A V+ K G T I+ G +A +L
Sbjct: 129 VEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 91.3 bits (225), Expect = 3e-18, Method: Composition-based stats.
Identities = 52/128 (40%), Positives = 75/128 (58%), Gaps = 2/128 (1%)
Query: 1262 LHHSAQQGHSTIVALLLDRGASPNAT-NKGFTPLHHSAQQGHSTIVALLLDRGASPNATN 1320
L +A+ G V +L+ GA NA N G TPLH +A GH IV +LL GA +A++
Sbjct: 18 LLEAARAGQDDEVRILMANGADVNAADNTGTTPLHLAAYSGHLEIVEVLLKHGADVDASD 77
Query: 1321 KTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRG 1380
G+TPLH+A ++G + + +LL A+V+ G TPLH +A+ G+ IV +LL G
Sbjct: 78 -VFGYTPLHLAAYWGHLEIVEVLLKNGADVNAMDSDGMTPLHLAAKWGYLEIVEVLLKHG 136
Query: 1381 ASPNATNK 1388
A NA +K
Sbjct: 137 ADVNAQDK 144
Score = 90.9 bits (224), Expect = 4e-18, Method: Composition-based stats.
Identities = 50/128 (39%), Positives = 68/128 (53%)
Query: 1106 LLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAA 1165
LL + D L+ GA NA G TPLHL+A GH ++ +LL+HGADV +
Sbjct: 18 LLEAARAGQDDEVRILMANGADVNAADNTGTTPLHLAAYSGHLEIVEVLLKHGADVDASD 77
Query: 1166 KNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSA 1225
G TPLHL A + + E+LLKN A V+ G TPLH+A +G + + +LL A
Sbjct: 78 VFGYTPLHLAAYWGHLEIVEVLLKNGADVNAMDSDGMTPLHLAAKWGYLEIVEVLLKHGA 137
Query: 1226 NVTVPKNF 1233
+V F
Sbjct: 138 DVNAQDKF 145
Score = 89.4 bits (220), Expect = 1e-17, Method: Composition-based stats.
Identities = 53/144 (36%), Positives = 79/144 (54%), Gaps = 8/144 (5%)
Query: 131 VLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKAPVDDVTVDYLTA 190
+L+ NGA + + G TPLHL GH+++ ++LL+ A VD DV Y T
Sbjct: 32 ILMANGADVNAADNTGTTPLHLAAYSGHLEIVEVLLKHGADVD------ASDV-FGY-TP 83
Query: 191 LHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATT 250
LH+AA+ GH + + LL AD NA +G TPLH+A K +++VE+LLKHGA + A
Sbjct: 84 LHLAAYWGHLEIVEVLLKNGADVNAMDSDGMTPLHLAAKWGYLEIVEVLLKHGADVNAQD 143
Query: 251 EVREPMLHIACKKNRIKVVELLLK 274
+ + I+ + E+L K
Sbjct: 144 KFGKTAFDISIDNGNEDLAEILQK 167
Score = 87.8 bits (216), Expect = 4e-17, Method: Composition-based stats.
Identities = 51/147 (34%), Positives = 79/147 (53%)
Query: 194 AAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVR 253
AA G + L+ AD NA G TPLH+A +++VE+LLKHGA ++A+
Sbjct: 21 AARAGQDDEVRILMANGADVNAADNTGTTPLHLAAYSGHLEIVEVLLKHGADVDASDVFG 80
Query: 254 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 313
LH+A +++VE+LLK+GA + A LH+A K +++VE+LLKHGA +
Sbjct: 81 YTPLHLAAYWGHLEIVEVLLKNGADVNAMDSDGMTPLHLAAKWGYLEIVEVLLKHGADVN 140
Query: 314 ATTEVREPMLHIACKKNRIKVVELLLK 340
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 80.1 bits (196), Expect = 8e-15, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 75/138 (54%)
Query: 236 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 295
V +L+ +GA + A LH+A +++VE+LLKHGA ++A+ LH+A
Sbjct: 30 VRILMANGADVNAADNTGTTPLHLAAYSGHLEIVEVLLKHGADVDASDVFGYTPLHLAAY 89
Query: 296 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 355
+++VE+LLK+GA + A LH+A K +++VE+LLKHGA + A + +
Sbjct: 90 WGHLEIVEVLLKNGADVNAMDSDGMTPLHLAAKWGYLEIVEVLLKHGADVNAQDKFGKTA 149
Query: 356 LHIACKKNRIKVVELLLK 373
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 80.1 bits (196), Expect = 8e-15, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 75/138 (54%)
Query: 269 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 328
V +L+ +GA + A LH+A +++VE+LLKHGA ++A+ LH+A
Sbjct: 30 VRILMANGADVNAADNTGTTPLHLAAYSGHLEIVEVLLKHGADVDASDVFGYTPLHLAAY 89
Query: 329 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 388
+++VE+LLK+GA + A LH+A K +++VE+LLKHGA + A + +
Sbjct: 90 WGHLEIVEVLLKNGADVNAMDSDGMTPLHLAAKWGYLEIVEVLLKHGADVNAQDKFGKTA 149
Query: 389 LHIACKKNRIKVVELLLK 406
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 80.1 bits (196), Expect = 8e-15, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 75/138 (54%)
Query: 302 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 361
V +L+ +GA + A LH+A +++VE+LLKHGA ++A+ LH+A
Sbjct: 30 VRILMANGADVNAADNTGTTPLHLAAYSGHLEIVEVLLKHGADVDASDVFGYTPLHLAAY 89
Query: 362 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 421
+++VE+LLK+GA + A LH+A K +++VE+LLKHGA + A + +
Sbjct: 90 WGHLEIVEVLLKNGADVNAMDSDGMTPLHLAAKWGYLEIVEVLLKHGADVNAQDKFGKTA 149
Query: 422 LHIACKKNRIKVVELLLK 439
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 80.1 bits (196), Expect = 8e-15, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 75/138 (54%)
Query: 335 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 394
V +L+ +GA + A LH+A +++VE+LLKHGA ++A+ LH+A
Sbjct: 30 VRILMANGADVNAADNTGTTPLHLAAYSGHLEIVEVLLKHGADVDASDVFGYTPLHLAAY 89
Query: 395 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 454
+++VE+LLK+GA + A LH+A K +++VE+LLKHGA + A + +
Sbjct: 90 WGHLEIVEVLLKNGADVNAMDSDGMTPLHLAAKWGYLEIVEVLLKHGADVNAQDKFGKTA 149
Query: 455 LHIACKKNRIKVVELLLK 472
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 80.1 bits (196), Expect = 8e-15, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 75/138 (54%)
Query: 368 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 427
V +L+ +GA + A LH+A +++VE+LLKHGA ++A+ LH+A
Sbjct: 30 VRILMANGADVNAADNTGTTPLHLAAYSGHLEIVEVLLKHGADVDASDVFGYTPLHLAAY 89
Query: 428 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 487
+++VE+LLK+GA + A LH+A K +++VE+LLKHGA + A + +
Sbjct: 90 WGHLEIVEVLLKNGADVNAMDSDGMTPLHLAAKWGYLEIVEVLLKHGADVNAQDKFGKTA 149
Query: 488 LHIACKKNRIKVVELLLK 505
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 80.1 bits (196), Expect = 8e-15, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 75/138 (54%)
Query: 401 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 460
V +L+ +GA + A LH+A +++VE+LLKHGA ++A+ LH+A
Sbjct: 30 VRILMANGADVNAADNTGTTPLHLAAYSGHLEIVEVLLKHGADVDASDVFGYTPLHLAAY 89
Query: 461 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 520
+++VE+LLK+GA + A LH+A K +++VE+LLKHGA + A + +
Sbjct: 90 WGHLEIVEVLLKNGADVNAMDSDGMTPLHLAAKWGYLEIVEVLLKHGADVNAQDKFGKTA 149
Query: 521 LHIACKKNRIKVVELLLK 538
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 80.1 bits (196), Expect = 8e-15, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 75/138 (54%)
Query: 434 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 493
V +L+ +GA + A LH+A +++VE+LLKHGA ++A+ LH+A
Sbjct: 30 VRILMANGADVNAADNTGTTPLHLAAYSGHLEIVEVLLKHGADVDASDVFGYTPLHLAAY 89
Query: 494 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 553
+++VE+LLK+GA + A LH+A K +++VE+LLKHGA + A + +
Sbjct: 90 WGHLEIVEVLLKNGADVNAMDSDGMTPLHLAAKWGYLEIVEVLLKHGADVNAQDKFGKTA 149
Query: 554 LHIACKKNRIKVVELLLK 571
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 80.1 bits (196), Expect = 8e-15, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 75/138 (54%)
Query: 467 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 526
V +L+ +GA + A LH+A +++VE+LLKHGA ++A+ LH+A
Sbjct: 30 VRILMANGADVNAADNTGTTPLHLAAYSGHLEIVEVLLKHGADVDASDVFGYTPLHLAAY 89
Query: 527 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 586
+++VE+LLK+GA + A LH+A K +++VE+LLKHGA + A + +
Sbjct: 90 WGHLEIVEVLLKNGADVNAMDSDGMTPLHLAAKWGYLEIVEVLLKHGADVNAQDKFGKTA 149
Query: 587 LHIACKKNRIKVVELLLK 604
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 80.1 bits (196), Expect = 8e-15, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 75/138 (54%)
Query: 500 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 559
V +L+ +GA + A LH+A +++VE+LLKHGA ++A+ LH+A
Sbjct: 30 VRILMANGADVNAADNTGTTPLHLAAYSGHLEIVEVLLKHGADVDASDVFGYTPLHLAAY 89
Query: 560 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 619
+++VE+LLK+GA + A LH+A K +++VE+LLKHGA + A + +
Sbjct: 90 WGHLEIVEVLLKNGADVNAMDSDGMTPLHLAAKWGYLEIVEVLLKHGADVNAQDKFGKTA 149
Query: 620 LHIACKKNRIKVVELLLK 637
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 80.1 bits (196), Expect = 8e-15, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 75/138 (54%)
Query: 533 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 592
V +L+ +GA + A LH+A +++VE+LLKHGA ++A+ LH+A
Sbjct: 30 VRILMANGADVNAADNTGTTPLHLAAYSGHLEIVEVLLKHGADVDASDVFGYTPLHLAAY 89
Query: 593 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 652
+++VE+LLK+GA + A LH+A K +++VE+LLKHGA + A + +
Sbjct: 90 WGHLEIVEVLLKNGADVNAMDSDGMTPLHLAAKWGYLEIVEVLLKHGADVNAQDKFGKTA 149
Query: 653 LHIACKKNRIKVVELLLK 670
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 80.1 bits (196), Expect = 8e-15, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 75/138 (54%)
Query: 566 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 625
V +L+ +GA + A LH+A +++VE+LLKHGA ++A+ LH+A
Sbjct: 30 VRILMANGADVNAADNTGTTPLHLAAYSGHLEIVEVLLKHGADVDASDVFGYTPLHLAAY 89
Query: 626 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 685
+++VE+LLK+GA + A LH+A K +++VE+LLKHGA + A + +
Sbjct: 90 WGHLEIVEVLLKNGADVNAMDSDGMTPLHLAAKWGYLEIVEVLLKHGADVNAQDKFGKTA 149
Query: 686 LHIACKKNRIKVVELLLK 703
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 80.1 bits (196), Expect = 8e-15, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 75/138 (54%)
Query: 599 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 658
V +L+ +GA + A LH+A +++VE+LLKHGA ++A+ LH+A
Sbjct: 30 VRILMANGADVNAADNTGTTPLHLAAYSGHLEIVEVLLKHGADVDASDVFGYTPLHLAAY 89
Query: 659 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 718
+++VE+LLK+GA + A LH+A K +++VE+LLKHGA + A + +
Sbjct: 90 WGHLEIVEVLLKNGADVNAMDSDGMTPLHLAAKWGYLEIVEVLLKHGADVNAQDKFGKTA 149
Query: 719 LHIACKKNRIKVVELLLK 736
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 80.1 bits (196), Expect = 8e-15, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 75/138 (54%)
Query: 632 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 691
V +L+ +GA + A LH+A +++VE+LLKHGA ++A+ LH+A
Sbjct: 30 VRILMANGADVNAADNTGTTPLHLAAYSGHLEIVEVLLKHGADVDASDVFGYTPLHLAAY 89
Query: 692 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 751
+++VE+LLK+GA + A LH+A K +++VE+LLKHGA + A + +
Sbjct: 90 WGHLEIVEVLLKNGADVNAMDSDGMTPLHLAAKWGYLEIVEVLLKHGADVNAQDKFGKTA 149
Query: 752 LHIACKKNRIKVVELLLK 769
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 80.1 bits (196), Expect = 8e-15, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 75/138 (54%)
Query: 665 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 724
V +L+ +GA + A LH+A +++VE+LLKHGA ++A+ LH+A
Sbjct: 30 VRILMANGADVNAADNTGTTPLHLAAYSGHLEIVEVLLKHGADVDASDVFGYTPLHLAAY 89
Query: 725 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 784
+++VE+LLK+GA + A LH+A K +++VE+LLKHGA + A + +
Sbjct: 90 WGHLEIVEVLLKNGADVNAMDSDGMTPLHLAAKWGYLEIVEVLLKHGADVNAQDKFGKTA 149
Query: 785 LHIACKKNRIKVVELLLK 802
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 80.1 bits (196), Expect = 8e-15, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 75/138 (54%)
Query: 698 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 757
V +L+ +GA + A LH+A +++VE+LLKHGA ++A+ LH+A
Sbjct: 30 VRILMANGADVNAADNTGTTPLHLAAYSGHLEIVEVLLKHGADVDASDVFGYTPLHLAAY 89
Query: 758 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 817
+++VE+LLK+GA + A LH+A K +++VE+LLKHGA + A + +
Sbjct: 90 WGHLEIVEVLLKNGADVNAMDSDGMTPLHLAAKWGYLEIVEVLLKHGADVNAQDKFGKTA 149
Query: 818 LHIACKKNRIKVVELLLK 835
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 80.1 bits (196), Expect = 8e-15, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 75/138 (54%)
Query: 731 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 790
V +L+ +GA + A LH+A +++VE+LLKHGA ++A+ LH+A
Sbjct: 30 VRILMANGADVNAADNTGTTPLHLAAYSGHLEIVEVLLKHGADVDASDVFGYTPLHLAAY 89
Query: 791 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 850
+++VE+LLK+GA + A LH+A K +++VE+LLKHGA + A + +
Sbjct: 90 WGHLEIVEVLLKNGADVNAMDSDGMTPLHLAAKWGYLEIVEVLLKHGADVNAQDKFGKTA 149
Query: 851 LHIACKKNRIKVVELLLK 868
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 80.1 bits (196), Expect = 8e-15, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 75/138 (54%)
Query: 764 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 823
V +L+ +GA + A LH+A +++VE+LLKHGA ++A+ LH+A
Sbjct: 30 VRILMANGADVNAADNTGTTPLHLAAYSGHLEIVEVLLKHGADVDASDVFGYTPLHLAAY 89
Query: 824 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 883
+++VE+LLK+GA + A LH+A K +++VE+LLKHGA + A + +
Sbjct: 90 WGHLEIVEVLLKNGADVNAMDSDGMTPLHLAAKWGYLEIVEVLLKHGADVNAQDKFGKTA 149
Query: 884 LHIACKKNRIKVVELLLK 901
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 80.1 bits (196), Expect = 8e-15, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 75/138 (54%)
Query: 797 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 856
V +L+ +GA + A LH+A +++VE+LLKHGA ++A+ LH+A
Sbjct: 30 VRILMANGADVNAADNTGTTPLHLAAYSGHLEIVEVLLKHGADVDASDVFGYTPLHLAAY 89
Query: 857 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 916
+++VE+LLK+GA + A LH+A K +++VE+LLKHGA + A + +
Sbjct: 90 WGHLEIVEVLLKNGADVNAMDSDGMTPLHLAAKWGYLEIVEVLLKHGADVNAQDKFGKTA 149
Query: 917 LHIACKKNRIKVVELLLK 934
I+ + E+L K
Sbjct: 150 FDISIDNGNEDLAEILQK 167
Score = 80.1 bits (196), Expect = 9e-15, Method: Composition-based stats.
Identities = 43/119 (36%), Positives = 68/119 (57%)
Query: 189 TALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEA 248
T LH+AA+ GH + + LL AD +A + G+TPLH+A +++VE+LLK+GA + A
Sbjct: 49 TPLHLAAYSGHLEIVEVLLKHGADVDASDVFGYTPLHLAAYWGHLEIVEVLLKNGADVNA 108
Query: 249 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 307
LH+A K +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 109 MDSDGMTPLHLAAKWGYLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 79.3 bits (194), Expect = 1e-14, Method: Composition-based stats.
Identities = 47/122 (38%), Positives = 68/122 (55%), Gaps = 2/122 (1%)
Query: 1256 DQGFTPLHHSAQQGHSTIVALLLDRGASPNATNK-GFTPLHHSAQQGHSTIVALLLDRGA 1314
+ G TPLH +A GH IV +LL GA +A++ G+TPLH +A GH IV +LL GA
Sbjct: 45 NTGTTPLHLAAYSGHLEIVEVLLKHGADVDASDVFGYTPLHLAAYWGHLEIVEVLLKNGA 104
Query: 1315 SPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVA 1374
NA + + G TPLH+A +G + + +LL A+V+ G T S G+ +
Sbjct: 105 DVNAMD-SDGMTPLHLAAKWGYLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAE 163
Query: 1375 LL 1376
+L
Sbjct: 164 IL 165
Score = 79.3 bits (194), Expect = 1e-14, Method: Composition-based stats.
Identities = 57/169 (33%), Positives = 79/169 (46%), Gaps = 29/169 (17%)
Query: 1176 AQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPS 1235
Q+D V +L+ N A V+ G TPLH+A + G + + +LL A+V F
Sbjct: 25 GQDDEV---RILMANGADVNAADNTGTTPLHLAAYSGHLEIVEVLLKHGADVDASDVF-- 79
Query: 1236 RXXXXXXXXXXXXXXYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATNK-GFTPL 1294
G+TPLH +A GH IV +LL GA NA + G TPL
Sbjct: 80 ----------------------GYTPLHLAAYWGHLEIVEVLLKNGADVNAMDSDGMTPL 117
Query: 1295 HHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLL 1343
H +A+ G+ IV +LL GA NA +K G T I+ G +A +L
Sbjct: 118 HLAAKWGYLEIVEVLLKHGADVNAQDKF-GKTAFDISIDNGNEDLAEIL 165
Score = 77.0 bits (188), Expect = 7e-14, Method: Composition-based stats.
Identities = 43/137 (31%), Positives = 75/137 (54%)
Query: 830 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 889
V +L+ +GA + A LH+A +++VE+LLKHGA ++A+ LH+A
Sbjct: 30 VRILMANGADVNAADNTGTTPLHLAAYSGHLEIVEVLLKHGADVDASDVFGYTPLHLAAY 89
Query: 890 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASSHVVSCYSNVK 949
+++VE+LLK+GA + A LH+A K +++VE+LLKHGA + +
Sbjct: 90 WGHLEIVEVLLKNGADVNAMDSDGMTPLHLAAKWGYLEIVEVLLKHGADVNAQDKFGKTA 149
Query: 950 VHVSLNKIQDVSSSILR 966
+S++ + + IL+
Sbjct: 150 FDISIDNGNEDLAEILQ 166
Score = 76.6 bits (187), Expect = 8e-14, Method: Composition-based stats.
Identities = 49/153 (32%), Positives = 83/153 (54%), Gaps = 24/153 (15%)
Query: 40 AAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISSKTKVR 99
AA+ G+ + V +L++ GA+++ G T LH AA SGH ++E+LL+ GA + + + V
Sbjct: 21 AARAGQDDEVRILMANGADVNAADNTGTTPLHLAAYSGHLEIVEVLLKHGADVDA-SDVF 79
Query: 100 GFYILRS----GHEAVIEMLLEQGAPISSKTKVAAVLLENGASLTSTTKKGFTPLHLTGK 155
G+ L GH ++E VLL+NGA + + G TPLHL K
Sbjct: 80 GYTPLHLAAYWGHLEIVE-----------------VLLKNGADVNAMDSDGMTPLHLAAK 122
Query: 156 YGHIKVAKLLLQKDAPVDFQGK--APVDDVTVD 186
+G++++ ++LL+ A V+ Q K D+++D
Sbjct: 123 WGYLEIVEVLLKHGADVNAQDKFGKTAFDISID 155
Score = 62.4 bits (150), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 55/84 (65%), Gaps = 3/84 (3%)
Query: 35 TPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISS 94
TPLH+AA WG +V +LL GA+++ DG+T LH AA+ G+ ++E+LL+ GA +++
Sbjct: 82 TPLHLAAYWGHLEIVEVLLKNGADVNAMDSDGMTPLHLAAKWGYLEIVEVLLKHGADVNA 141
Query: 95 KTKV--RGFYI-LRSGHEAVIEML 115
+ K F I + +G+E + E+L
Sbjct: 142 QDKFGKTAFDISIDNGNEDLAEIL 165
Score = 58.2 bits (139), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 5/97 (5%)
Query: 35 TPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISS 94
TPLH+AA G +V +LL GA++D G T LH AA GH ++E+LL+ GA +++
Sbjct: 49 TPLHLAAYSGHLEIVEVLLKHGADVDASDVFGYTPLHLAAYWGHLEIVEVLLKNGADVNA 108
Query: 95 KTKVRGFYIL----RSGHEAVIEMLLEQGAPISSKTK 127
G L + G+ ++E+LL+ GA ++++ K
Sbjct: 109 MDS-DGMTPLHLAAKWGYLEIVEVLLKHGADVNAQDK 144
Score = 46.2 bits (108), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 34 ITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEML 85
+TPLH+AAKWG +V +LL GA+++ + + G TA + +G+E + E+L
Sbjct: 114 MTPLHLAAKWGYLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165
>pdb|1MJ0|A Chain A, Sank E3_5: An Artificial Ankyrin Repeat Protein
Length = 166
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 90/158 (56%), Gaps = 13/158 (8%)
Query: 997 ASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKG 1056
A+R G D V +L+ +GA V++T D YT LH+AA G E+ VLL+NGA + ++ G
Sbjct: 21 AARAGQDDEVRILMANGADVNATDNDGYTPLHLAASNGHLEIVEVLLKNGADVNASDLTG 80
Query: 1057 FTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMD 1116
TPLHL GH+++ ++LL+ A V+ +G TPLH+A+ Y H ++
Sbjct: 81 ITPLHLAAATGHLEIVEVLLKHGADVNAYDNDGHTPLHLAAKYGH-------------LE 127
Query: 1117 IATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAML 1154
I LL++GA NA+ G T +S G+ D++ +L
Sbjct: 128 IVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 100 bits (250), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 91/166 (54%), Gaps = 13/166 (7%)
Query: 1022 DLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAP 1081
DL L AA+ GQ++ +L+ NGA + +T G+TPLHL GH+++ ++LL+ A
Sbjct: 13 DLGKKLLEAARAGQDDEVRILMANGADVNATDNDGYTPLHLAASNGHLEIVEVLLKNGAD 72
Query: 1082 VDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHL 1141
V+ G+TPLH+A+ H ++I LL++GA NA G TPLHL
Sbjct: 73 VNASDLTGITPLHLAAATGH-------------LEIVEVLLKHGADVNAYDNDGHTPLHL 119
Query: 1142 SASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELL 1187
+A GH ++ +LL+HGADV+ K G T + +AE+L
Sbjct: 120 AAKYGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 97.4 bits (241), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 79/145 (54%)
Query: 194 AAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVR 253
AA G + L+ AD NA +G+TPLH+A +++VE+LLK+GA + A+
Sbjct: 21 AARAGQDDEVRILMANGADVNATDNDGYTPLHLAASNGHLEIVEVLLKNGADVNASDLTG 80
Query: 254 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 313
LH+A +++VE+LLKHGA + A LH+A K +++VE+LLKHGA +
Sbjct: 81 ITPLHLAAATGHLEIVEVLLKHGADVNAYDNDGHTPLHLAAKYGHLEIVEVLLKHGADVN 140
Query: 314 ATTEVREPMLHIACKKNRIKVVELL 338
A + + I+ + E+L
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 95.1 bits (235), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 75/125 (60%), Gaps = 2/125 (1%)
Query: 1265 SAQQGHSTIVALLLDRGASPNAT-NKGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTR 1323
+A+ G V +L+ GA NAT N G+TPLH +A GH IV +LL GA NA++ T
Sbjct: 21 AARAGQDDEVRILMANGADVNATDNDGYTPLHLAASNGHLEIVEVLLKNGADVNASDLT- 79
Query: 1324 GFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGASP 1383
G TPLH+A G + + +LL A+V+ + G TPLH +A+ GH IV +LL GA
Sbjct: 80 GITPLHLAAATGHLEIVEVLLKHGADVNAYDNDGHTPLHLAAKYGHLEIVEVLLKHGADV 139
Query: 1384 NATNK 1388
NA +K
Sbjct: 140 NAQDK 144
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 68/113 (60%)
Query: 1121 LLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDR 1180
L+ GA NA G+TPLHL+AS GH ++ +LL++GADV+ + G+TPLHL A
Sbjct: 33 LMANGADVNATDNDGYTPLHLAASNGHLEIVEVLLKNGADVNASDLTGITPLHLAAATGH 92
Query: 1181 VGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNF 1233
+ + E+LLK+ A V+ G TPLH+A YG + + +LL A+V F
Sbjct: 93 LEIVEVLLKHGADVNAYDNDGHTPLHLAAKYGHLEIVEVLLKHGADVNAQDKF 145
Score = 90.5 bits (223), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 69/128 (53%)
Query: 178 APVDDVTVDYLTALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVE 237
A V+ D T LH+AA GH + + LL AD NA L G TPLH+A +++VE
Sbjct: 38 ADVNATDNDGYTPLHLAASNGHLEIVEVLLKNGADVNASDLTGITPLHLAAATGHLEIVE 97
Query: 238 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKN 297
+LLKHGA + A LH+A K +++VE+LLKHGA + A + + I+
Sbjct: 98 VLLKHGADVNAYDNDGHTPLHLAAKYGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNG 157
Query: 298 RIKVVELL 305
+ E+L
Sbjct: 158 NEDLAEIL 165
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 83/156 (53%), Gaps = 13/156 (8%)
Query: 1065 KYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEY 1124
+ G ++L+ A V+ +G TPLH+A+ H ++I LL+
Sbjct: 23 RAGQDDEVRILMANGADVNATDNDGYTPLHLAASNGH-------------LEIVEVLLKN 69
Query: 1125 GAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVA 1184
GA NA + G TPLHL+A+ GH ++ +LL+HGADV+ +G TPLHL A+ + +
Sbjct: 70 GADVNASDLTGITPLHLAAATGHLEIVEVLLKHGADVNAYDNDGHTPLHLAAKYGHLEIV 129
Query: 1185 ELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLL 1220
E+LLK+ A V+ K G T I+ G +A +L
Sbjct: 130 EVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 77/145 (53%)
Query: 227 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 286
A + + V +L+ +GA + AT LH+A +++VE+LLK+GA + A+
Sbjct: 21 AARAGQDDEVRILMANGADVNATDNDGYTPLHLAASNGHLEIVEVLLKNGADVNASDLTG 80
Query: 287 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 346
LH+A +++VE+LLKHGA + A LH+A K +++VE+LLKHGA +
Sbjct: 81 ITPLHLAAATGHLEIVEVLLKHGADVNAYDNDGHTPLHLAAKYGHLEIVEVLLKHGADVN 140
Query: 347 ATTEVREPMLHIACKKNRIKVVELL 371
A + + I+ + E+L
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 77/145 (53%)
Query: 260 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 319
A + + V +L+ +GA + AT LH+A +++VE+LLK+GA + A+
Sbjct: 21 AARAGQDDEVRILMANGADVNATDNDGYTPLHLAASNGHLEIVEVLLKNGADVNASDLTG 80
Query: 320 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 379
LH+A +++VE+LLKHGA + A LH+A K +++VE+LLKHGA +
Sbjct: 81 ITPLHLAAATGHLEIVEVLLKHGADVNAYDNDGHTPLHLAAKYGHLEIVEVLLKHGADVN 140
Query: 380 ATTEVREPMLHIACKKNRIKVVELL 404
A + + I+ + E+L
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 77/145 (53%)
Query: 293 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 352
A + + V +L+ +GA + AT LH+A +++VE+LLK+GA + A+
Sbjct: 21 AARAGQDDEVRILMANGADVNATDNDGYTPLHLAASNGHLEIVEVLLKNGADVNASDLTG 80
Query: 353 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 412
LH+A +++VE+LLKHGA + A LH+A K +++VE+LLKHGA +
Sbjct: 81 ITPLHLAAATGHLEIVEVLLKHGADVNAYDNDGHTPLHLAAKYGHLEIVEVLLKHGADVN 140
Query: 413 ATTEVREPMLHIACKKNRIKVVELL 437
A + + I+ + E+L
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 77/145 (53%)
Query: 326 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 385
A + + V +L+ +GA + AT LH+A +++VE+LLK+GA + A+
Sbjct: 21 AARAGQDDEVRILMANGADVNATDNDGYTPLHLAASNGHLEIVEVLLKNGADVNASDLTG 80
Query: 386 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 445
LH+A +++VE+LLKHGA + A LH+A K +++VE+LLKHGA +
Sbjct: 81 ITPLHLAAATGHLEIVEVLLKHGADVNAYDNDGHTPLHLAAKYGHLEIVEVLLKHGADVN 140
Query: 446 ATTEVREPMLHIACKKNRIKVVELL 470
A + + I+ + E+L
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 77/145 (53%)
Query: 359 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 418
A + + V +L+ +GA + AT LH+A +++VE+LLK+GA + A+
Sbjct: 21 AARAGQDDEVRILMANGADVNATDNDGYTPLHLAASNGHLEIVEVLLKNGADVNASDLTG 80
Query: 419 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 478
LH+A +++VE+LLKHGA + A LH+A K +++VE+LLKHGA +
Sbjct: 81 ITPLHLAAATGHLEIVEVLLKHGADVNAYDNDGHTPLHLAAKYGHLEIVEVLLKHGADVN 140
Query: 479 ATTEVREPMLHIACKKNRIKVVELL 503
A + + I+ + E+L
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 77/145 (53%)
Query: 392 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 451
A + + V +L+ +GA + AT LH+A +++VE+LLK+GA + A+
Sbjct: 21 AARAGQDDEVRILMANGADVNATDNDGYTPLHLAASNGHLEIVEVLLKNGADVNASDLTG 80
Query: 452 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 511
LH+A +++VE+LLKHGA + A LH+A K +++VE+LLKHGA +
Sbjct: 81 ITPLHLAAATGHLEIVEVLLKHGADVNAYDNDGHTPLHLAAKYGHLEIVEVLLKHGADVN 140
Query: 512 ATTEVREPMLHIACKKNRIKVVELL 536
A + + I+ + E+L
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 77/145 (53%)
Query: 425 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 484
A + + V +L+ +GA + AT LH+A +++VE+LLK+GA + A+
Sbjct: 21 AARAGQDDEVRILMANGADVNATDNDGYTPLHLAASNGHLEIVEVLLKNGADVNASDLTG 80
Query: 485 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 544
LH+A +++VE+LLKHGA + A LH+A K +++VE+LLKHGA +
Sbjct: 81 ITPLHLAAATGHLEIVEVLLKHGADVNAYDNDGHTPLHLAAKYGHLEIVEVLLKHGADVN 140
Query: 545 ATTEVREPMLHIACKKNRIKVVELL 569
A + + I+ + E+L
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 77/145 (53%)
Query: 458 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 517
A + + V +L+ +GA + AT LH+A +++VE+LLK+GA + A+
Sbjct: 21 AARAGQDDEVRILMANGADVNATDNDGYTPLHLAASNGHLEIVEVLLKNGADVNASDLTG 80
Query: 518 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 577
LH+A +++VE+LLKHGA + A LH+A K +++VE+LLKHGA +
Sbjct: 81 ITPLHLAAATGHLEIVEVLLKHGADVNAYDNDGHTPLHLAAKYGHLEIVEVLLKHGADVN 140
Query: 578 ATTEVREPMLHIACKKNRIKVVELL 602
A + + I+ + E+L
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 77/145 (53%)
Query: 491 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 550
A + + V +L+ +GA + AT LH+A +++VE+LLK+GA + A+
Sbjct: 21 AARAGQDDEVRILMANGADVNATDNDGYTPLHLAASNGHLEIVEVLLKNGADVNASDLTG 80
Query: 551 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 610
LH+A +++VE+LLKHGA + A LH+A K +++VE+LLKHGA +
Sbjct: 81 ITPLHLAAATGHLEIVEVLLKHGADVNAYDNDGHTPLHLAAKYGHLEIVEVLLKHGADVN 140
Query: 611 ATTEVREPMLHIACKKNRIKVVELL 635
A + + I+ + E+L
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 77/145 (53%)
Query: 524 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 583
A + + V +L+ +GA + AT LH+A +++VE+LLK+GA + A+
Sbjct: 21 AARAGQDDEVRILMANGADVNATDNDGYTPLHLAASNGHLEIVEVLLKNGADVNASDLTG 80
Query: 584 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 643
LH+A +++VE+LLKHGA + A LH+A K +++VE+LLKHGA +
Sbjct: 81 ITPLHLAAATGHLEIVEVLLKHGADVNAYDNDGHTPLHLAAKYGHLEIVEVLLKHGADVN 140
Query: 644 ATTEVREPMLHIACKKNRIKVVELL 668
A + + I+ + E+L
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 77/145 (53%)
Query: 557 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 616
A + + V +L+ +GA + AT LH+A +++VE+LLK+GA + A+
Sbjct: 21 AARAGQDDEVRILMANGADVNATDNDGYTPLHLAASNGHLEIVEVLLKNGADVNASDLTG 80
Query: 617 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 676
LH+A +++VE+LLKHGA + A LH+A K +++VE+LLKHGA +
Sbjct: 81 ITPLHLAAATGHLEIVEVLLKHGADVNAYDNDGHTPLHLAAKYGHLEIVEVLLKHGADVN 140
Query: 677 ATTEVREPMLHIACKKNRIKVVELL 701
A + + I+ + E+L
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 77/145 (53%)
Query: 590 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 649
A + + V +L+ +GA + AT LH+A +++VE+LLK+GA + A+
Sbjct: 21 AARAGQDDEVRILMANGADVNATDNDGYTPLHLAASNGHLEIVEVLLKNGADVNASDLTG 80
Query: 650 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 709
LH+A +++VE+LLKHGA + A LH+A K +++VE+LLKHGA +
Sbjct: 81 ITPLHLAAATGHLEIVEVLLKHGADVNAYDNDGHTPLHLAAKYGHLEIVEVLLKHGADVN 140
Query: 710 ATTEVREPMLHIACKKNRIKVVELL 734
A + + I+ + E+L
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 77/145 (53%)
Query: 623 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 682
A + + V +L+ +GA + AT LH+A +++VE+LLK+GA + A+
Sbjct: 21 AARAGQDDEVRILMANGADVNATDNDGYTPLHLAASNGHLEIVEVLLKNGADVNASDLTG 80
Query: 683 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 742
LH+A +++VE+LLKHGA + A LH+A K +++VE+LLKHGA +
Sbjct: 81 ITPLHLAAATGHLEIVEVLLKHGADVNAYDNDGHTPLHLAAKYGHLEIVEVLLKHGADVN 140
Query: 743 ATTEVREPMLHIACKKNRIKVVELL 767
A + + I+ + E+L
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 77/145 (53%)
Query: 656 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 715
A + + V +L+ +GA + AT LH+A +++VE+LLK+GA + A+
Sbjct: 21 AARAGQDDEVRILMANGADVNATDNDGYTPLHLAASNGHLEIVEVLLKNGADVNASDLTG 80
Query: 716 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 775
LH+A +++VE+LLKHGA + A LH+A K +++VE+LLKHGA +
Sbjct: 81 ITPLHLAAATGHLEIVEVLLKHGADVNAYDNDGHTPLHLAAKYGHLEIVEVLLKHGADVN 140
Query: 776 ATTEVREPMLHIACKKNRIKVVELL 800
A + + I+ + E+L
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 77/145 (53%)
Query: 689 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 748
A + + V +L+ +GA + AT LH+A +++VE+LLK+GA + A+
Sbjct: 21 AARAGQDDEVRILMANGADVNATDNDGYTPLHLAASNGHLEIVEVLLKNGADVNASDLTG 80
Query: 749 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 808
LH+A +++VE+LLKHGA + A LH+A K +++VE+LLKHGA +
Sbjct: 81 ITPLHLAAATGHLEIVEVLLKHGADVNAYDNDGHTPLHLAAKYGHLEIVEVLLKHGADVN 140
Query: 809 ATTEVREPMLHIACKKNRIKVVELL 833
A + + I+ + E+L
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 77/145 (53%)
Query: 722 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 781
A + + V +L+ +GA + AT LH+A +++VE+LLK+GA + A+
Sbjct: 21 AARAGQDDEVRILMANGADVNATDNDGYTPLHLAASNGHLEIVEVLLKNGADVNASDLTG 80
Query: 782 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 841
LH+A +++VE+LLKHGA + A LH+A K +++VE+LLKHGA +
Sbjct: 81 ITPLHLAAATGHLEIVEVLLKHGADVNAYDNDGHTPLHLAAKYGHLEIVEVLLKHGADVN 140
Query: 842 ATTEVREPMLHIACKKNRIKVVELL 866
A + + I+ + E+L
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 77/145 (53%)
Query: 755 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 814
A + + V +L+ +GA + AT LH+A +++VE+LLK+GA + A+
Sbjct: 21 AARAGQDDEVRILMANGADVNATDNDGYTPLHLAASNGHLEIVEVLLKNGADVNASDLTG 80
Query: 815 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 874
LH+A +++VE+LLKHGA + A LH+A K +++VE+LLKHGA +
Sbjct: 81 ITPLHLAAATGHLEIVEVLLKHGADVNAYDNDGHTPLHLAAKYGHLEIVEVLLKHGADVN 140
Query: 875 ATTEVREPMLHIACKKNRIKVVELL 899
A + + I+ + E+L
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 77/145 (53%)
Query: 788 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 847
A + + V +L+ +GA + AT LH+A +++VE+LLK+GA + A+
Sbjct: 21 AARAGQDDEVRILMANGADVNATDNDGYTPLHLAASNGHLEIVEVLLKNGADVNASDLTG 80
Query: 848 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 907
LH+A +++VE+LLKHGA + A LH+A K +++VE+LLKHGA +
Sbjct: 81 ITPLHLAAATGHLEIVEVLLKHGADVNAYDNDGHTPLHLAAKYGHLEIVEVLLKHGADVN 140
Query: 908 ATTEVREPMLHIACKKNRIKVVELL 932
A + + I+ + E+L
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 68/124 (54%), Gaps = 2/124 (1%)
Query: 1254 TTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATN-KGFTPLHHSAQQGHSTIVALLLDR 1312
T + G+TPLH +A GH IV +LL GA NA++ G TPLH +A GH IV +LL
Sbjct: 43 TDNDGYTPLHLAASNGHLEIVEVLLKNGADVNASDLTGITPLHLAAATGHLEIVEVLLKH 102
Query: 1313 GASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTI 1372
GA NA + G TPLH+A YG + + +LL A+V+ G T S G+ +
Sbjct: 103 GADVNAYDND-GHTPLHLAAKYGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDL 161
Query: 1373 VALL 1376
+L
Sbjct: 162 AEIL 165
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 78/146 (53%)
Query: 821 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 880
A + + V +L+ +GA + AT LH+A +++VE+LLK+GA + A+
Sbjct: 21 AARAGQDDEVRILMANGADVNATDNDGYTPLHLAASNGHLEIVEVLLKNGADVNASDLTG 80
Query: 881 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASSH 940
LH+A +++VE+LLKHGA + A LH+A K +++VE+LLKHGA +
Sbjct: 81 ITPLHLAAATGHLEIVEVLLKHGADVNAYDNDGHTPLHLAAKYGHLEIVEVLLKHGADVN 140
Query: 941 VVSCYSNVKVHVSLNKIQDVSSSILR 966
+ +S++ + + IL+
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQ 166
Score = 83.2 bits (204), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 78/125 (62%)
Query: 984 NLRVREQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLL 1043
N + TPLH+A+ G+++IV +LL++GA V+++ T LH+AA G E+ VLL
Sbjct: 41 NATDNDGYTPLHLAASNGHLEIVEVLLKNGADVNASDLTGITPLHLAAATGHLEIVEVLL 100
Query: 1044 ENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQN 1103
++GA + + G TPLHL KYGH+++ ++LL+ A V+ Q K G T ++ +++
Sbjct: 101 KHGADVNAYDNDGHTPLHLAAKYGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNED 160
Query: 1104 VALLL 1108
+A +L
Sbjct: 161 LAEIL 165
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 86/154 (55%), Gaps = 26/154 (16%)
Query: 40 AAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISSKTKVR 99
AA+ G+ + V +L++ GA+++ DG T LH AA +GH ++E+LL+ GA +++ + +
Sbjct: 21 AARAGQDDEVRILMANGADVNATDNDGYTPLHLAASNGHLEIVEVLLKNGADVNA-SDLT 79
Query: 100 GFYILR----SGHEAVIEMLLEQGAPISSKTKVAAVLLENGASLTSTTKKGFTPLHLTGK 155
G L +GH ++E VLL++GA + + G TPLHL K
Sbjct: 80 GITPLHLAAATGHLEIVE-----------------VLLKHGADVNAYDNDGHTPLHLAAK 122
Query: 156 YGHIKVAKLLLQKDAPVDFQ---GKAPVDDVTVD 186
YGH+++ ++LL+ A V+ Q GK D+++D
Sbjct: 123 YGHLEIVEVLLKHGADVNAQDKFGKTAF-DISID 155
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 59/99 (59%), Gaps = 5/99 (5%)
Query: 35 TPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISS 94
TPLH+AA G +V +LL GA+++ G+T LH AA +GH ++E+LL+ GA +++
Sbjct: 49 TPLHLAASNGHLEIVEVLLKNGADVNASDLTGITPLHLAAATGHLEIVEVLLKHGADVNA 108
Query: 95 KTKVRGFYIL----RSGHEAVIEMLLEQGAPISSKTKVA 129
G L + GH ++E+LL+ GA ++++ K
Sbjct: 109 YDN-DGHTPLHLAAKYGHLEIVEVLLKHGADVNAQDKFG 146
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 54/85 (63%), Gaps = 3/85 (3%)
Query: 34 ITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPIS 93
ITPLH+AA G +V +LL GA+++ DG T LH AA+ GH ++E+LL+ GA ++
Sbjct: 81 ITPLHLAAATGHLEIVEVLLKHGADVNAYDNDGHTPLHLAAKYGHLEIVEVLLKHGADVN 140
Query: 94 SKTKV--RGFYI-LRSGHEAVIEML 115
++ K F I + +G+E + E+L
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEIL 165
>pdb|2BKG|A Chain A, Crystal Structure Of E3_19 An Designed Ankyrin Repeat
Protein
pdb|2BKG|B Chain B, Crystal Structure Of E3_19 An Designed Ankyrin Repeat
Protein
Length = 166
Score = 101 bits (251), Expect = 3e-21, Method: Composition-based stats.
Identities = 59/166 (35%), Positives = 91/166 (54%), Gaps = 13/166 (7%)
Query: 1022 DLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAP 1081
DL L AA+ GQ++ +L+ NGA + + G TPLHL + GH+++ ++LL+ A
Sbjct: 13 DLGKKLLEAARAGQDDEVRILMANGADVNAEDTYGDTPLHLAARVGHLEIVEVLLKNGAD 72
Query: 1082 VDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHL 1141
V+ +G TPLH+A+ H ++I LL+YGA NA+ G TPLHL
Sbjct: 73 VNALDFSGSTPLHLAAKRGH-------------LEIVEVLLKYGADVNADDTIGSTPLHL 119
Query: 1142 SASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELL 1187
+A GH ++ +LL++GADV+ K G T + +AE+L
Sbjct: 120 AADTGHLEIVEVLLKYGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 92.4 bits (228), Expect = 1e-18, Method: Composition-based stats.
Identities = 56/158 (35%), Positives = 86/158 (54%), Gaps = 13/158 (8%)
Query: 997 ASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKG 1056
A+R G D V +L+ +GA V++ T LH+AA+ G E+ VLL+NGA + + G
Sbjct: 21 AARAGQDDEVRILMANGADVNAEDTYGDTPLHLAARVGHLEIVEVLLKNGADVNALDFSG 80
Query: 1057 FTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMD 1116
TPLHL K GH+++ ++LL+ A V+ G TPLH+A+ H ++
Sbjct: 81 STPLHLAAKRGHLEIVEVLLKYGADVNADDTIGSTPLHLAADTGH-------------LE 127
Query: 1117 IATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAML 1154
I LL+YGA NA+ G T +S G+ D++ +L
Sbjct: 128 IVEVLLKYGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 87.0 bits (214), Expect = 7e-17, Method: Composition-based stats.
Identities = 48/145 (33%), Positives = 79/145 (54%)
Query: 194 AAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVR 253
AA G + L+ AD NA G TPLH+A + +++VE+LLK+GA + A
Sbjct: 21 AARAGQDDEVRILMANGADVNAEDTYGDTPLHLAARVGHLEIVEVLLKNGADVNALDFSG 80
Query: 254 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 313
LH+A K+ +++VE+LLK+GA + A + LH+A +++VE+LLK+GA +
Sbjct: 81 STPLHLAAKRGHLEIVEVLLKYGADVNADDTIGSTPLHLAADTGHLEIVEVLLKYGADVN 140
Query: 314 ATTEVREPMLHIACKKNRIKVVELL 338
A + + I+ + E+L
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 84.7 bits (208), Expect = 3e-16, Method: Composition-based stats.
Identities = 49/128 (38%), Positives = 69/128 (53%)
Query: 1106 LLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAA 1165
LL + D L+ GA NAE G TPLHL+A GH ++ +LL++GADV+
Sbjct: 18 LLEAARAGQDDEVRILMANGADVNAEDTYGDTPLHLAARVGHLEIVEVLLKNGADVNALD 77
Query: 1166 KNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSA 1225
+G TPLHL A+ + + E+LLK A V+ G TPLH+A G + + +LL A
Sbjct: 78 FSGSTPLHLAAKRGHLEIVEVLLKYGADVNADDTIGSTPLHLAADTGHLEIVEVLLKYGA 137
Query: 1226 NVTVPKNF 1233
+V F
Sbjct: 138 DVNAQDKF 145
Score = 84.3 bits (207), Expect = 4e-16, Method: Composition-based stats.
Identities = 45/117 (38%), Positives = 75/117 (64%)
Query: 992 TPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTS 1051
TPLH+A+R+G+++IV +LL++GA V++ T LH+AAK G E+ VLL+ GA + +
Sbjct: 49 TPLHLAARVGHLEIVEVLLKNGADVNALDFSGSTPLHLAAKRGHLEIVEVLLKYGADVNA 108
Query: 1052 TTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLL 1108
G TPLHL GH+++ ++LL+ A V+ Q K G T ++ ++++A +L
Sbjct: 109 DDTIGSTPLHLAADTGHLEIVEVLLKYGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 82.8 bits (203), Expect = 1e-15, Method: Composition-based stats.
Identities = 53/157 (33%), Positives = 79/157 (50%), Gaps = 13/157 (8%)
Query: 1064 GKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLE 1123
+ G ++L+ A V+ + G TPLH+A+ H ++I LL+
Sbjct: 22 ARAGQDDEVRILMANGADVNAEDTYGDTPLHLAARVGH-------------LEIVEVLLK 68
Query: 1124 YGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGV 1183
GA NA +G TPLHL+A GH ++ +LL++GADV+ G TPLHL A + +
Sbjct: 69 NGADVNALDFSGSTPLHLAAKRGHLEIVEVLLKYGADVNADDTIGSTPLHLAADTGHLEI 128
Query: 1184 AELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLL 1220
E+LLK A V+ K G T I+ G +A +L
Sbjct: 129 VEVLLKYGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 82.8 bits (203), Expect = 1e-15, Method: Composition-based stats.
Identities = 53/128 (41%), Positives = 72/128 (56%), Gaps = 2/128 (1%)
Query: 1262 LHHSAQQGHSTIVALLLDRGASPNATNK-GFTPLHHSAQQGHSTIVALLLDRGASPNATN 1320
L +A+ G V +L+ GA NA + G TPLH +A+ GH IV +LL GA NA +
Sbjct: 18 LLEAARAGQDDEVRILMANGADVNAEDTYGDTPLHLAARVGHLEIVEVLLKNGADVNALD 77
Query: 1321 KTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRG 1380
+ G TPLH+A G + + +LL A+V+ G TPLH +A GH IV +LL G
Sbjct: 78 FS-GSTPLHLAAKRGHLEIVEVLLKYGADVNADDTIGSTPLHLAADTGHLEIVEVLLKYG 136
Query: 1381 ASPNATNK 1388
A NA +K
Sbjct: 137 ADVNAQDK 144
Score = 82.8 bits (203), Expect = 1e-15, Method: Composition-based stats.
Identities = 42/117 (35%), Positives = 67/117 (57%)
Query: 189 TALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEA 248
T LH+AA GH + + LL AD NA +G TPLH+A K+ +++VE+LLK+GA + A
Sbjct: 49 TPLHLAARVGHLEIVEVLLKNGADVNALDFSGSTPLHLAAKRGHLEIVEVLLKYGADVNA 108
Query: 249 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 305
+ LH+A +++VE+LLK+GA + A + + I+ + E+L
Sbjct: 109 DDTIGSTPLHLAADTGHLEIVEVLLKYGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 79.3 bits (194), Expect = 1e-14, Method: Composition-based stats.
Identities = 42/136 (30%), Positives = 76/136 (55%)
Query: 236 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 295
V +L+ +GA + A + LH+A + +++VE+LLK+GA + A LH+A K
Sbjct: 30 VRILMANGADVNAEDTYGDTPLHLAARVGHLEIVEVLLKNGADVNALDFSGSTPLHLAAK 89
Query: 296 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 355
+ +++VE+LLK+GA + A + LH+A +++VE+LLK+GA + A + +
Sbjct: 90 RGHLEIVEVLLKYGADVNADDTIGSTPLHLAADTGHLEIVEVLLKYGADVNAQDKFGKTA 149
Query: 356 LHIACKKNRIKVVELL 371
I+ + E+L
Sbjct: 150 FDISIDNGNEDLAEIL 165
Score = 79.3 bits (194), Expect = 1e-14, Method: Composition-based stats.
Identities = 42/136 (30%), Positives = 76/136 (55%)
Query: 269 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 328
V +L+ +GA + A + LH+A + +++VE+LLK+GA + A LH+A K
Sbjct: 30 VRILMANGADVNAEDTYGDTPLHLAARVGHLEIVEVLLKNGADVNALDFSGSTPLHLAAK 89
Query: 329 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 388
+ +++VE+LLK+GA + A + LH+A +++VE+LLK+GA + A + +
Sbjct: 90 RGHLEIVEVLLKYGADVNADDTIGSTPLHLAADTGHLEIVEVLLKYGADVNAQDKFGKTA 149
Query: 389 LHIACKKNRIKVVELL 404
I+ + E+L
Sbjct: 150 FDISIDNGNEDLAEIL 165
Score = 79.3 bits (194), Expect = 1e-14, Method: Composition-based stats.
Identities = 42/136 (30%), Positives = 76/136 (55%)
Query: 302 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 361
V +L+ +GA + A + LH+A + +++VE+LLK+GA + A LH+A K
Sbjct: 30 VRILMANGADVNAEDTYGDTPLHLAARVGHLEIVEVLLKNGADVNALDFSGSTPLHLAAK 89
Query: 362 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 421
+ +++VE+LLK+GA + A + LH+A +++VE+LLK+GA + A + +
Sbjct: 90 RGHLEIVEVLLKYGADVNADDTIGSTPLHLAADTGHLEIVEVLLKYGADVNAQDKFGKTA 149
Query: 422 LHIACKKNRIKVVELL 437
I+ + E+L
Sbjct: 150 FDISIDNGNEDLAEIL 165
Score = 79.3 bits (194), Expect = 1e-14, Method: Composition-based stats.
Identities = 42/136 (30%), Positives = 76/136 (55%)
Query: 335 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 394
V +L+ +GA + A + LH+A + +++VE+LLK+GA + A LH+A K
Sbjct: 30 VRILMANGADVNAEDTYGDTPLHLAARVGHLEIVEVLLKNGADVNALDFSGSTPLHLAAK 89
Query: 395 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 454
+ +++VE+LLK+GA + A + LH+A +++VE+LLK+GA + A + +
Sbjct: 90 RGHLEIVEVLLKYGADVNADDTIGSTPLHLAADTGHLEIVEVLLKYGADVNAQDKFGKTA 149
Query: 455 LHIACKKNRIKVVELL 470
I+ + E+L
Sbjct: 150 FDISIDNGNEDLAEIL 165
Score = 79.3 bits (194), Expect = 1e-14, Method: Composition-based stats.
Identities = 42/136 (30%), Positives = 76/136 (55%)
Query: 368 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 427
V +L+ +GA + A + LH+A + +++VE+LLK+GA + A LH+A K
Sbjct: 30 VRILMANGADVNAEDTYGDTPLHLAARVGHLEIVEVLLKNGADVNALDFSGSTPLHLAAK 89
Query: 428 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 487
+ +++VE+LLK+GA + A + LH+A +++VE+LLK+GA + A + +
Sbjct: 90 RGHLEIVEVLLKYGADVNADDTIGSTPLHLAADTGHLEIVEVLLKYGADVNAQDKFGKTA 149
Query: 488 LHIACKKNRIKVVELL 503
I+ + E+L
Sbjct: 150 FDISIDNGNEDLAEIL 165
Score = 79.3 bits (194), Expect = 1e-14, Method: Composition-based stats.
Identities = 42/136 (30%), Positives = 76/136 (55%)
Query: 401 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 460
V +L+ +GA + A + LH+A + +++VE+LLK+GA + A LH+A K
Sbjct: 30 VRILMANGADVNAEDTYGDTPLHLAARVGHLEIVEVLLKNGADVNALDFSGSTPLHLAAK 89
Query: 461 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 520
+ +++VE+LLK+GA + A + LH+A +++VE+LLK+GA + A + +
Sbjct: 90 RGHLEIVEVLLKYGADVNADDTIGSTPLHLAADTGHLEIVEVLLKYGADVNAQDKFGKTA 149
Query: 521 LHIACKKNRIKVVELL 536
I+ + E+L
Sbjct: 150 FDISIDNGNEDLAEIL 165
Score = 79.3 bits (194), Expect = 1e-14, Method: Composition-based stats.
Identities = 42/136 (30%), Positives = 76/136 (55%)
Query: 434 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 493
V +L+ +GA + A + LH+A + +++VE+LLK+GA + A LH+A K
Sbjct: 30 VRILMANGADVNAEDTYGDTPLHLAARVGHLEIVEVLLKNGADVNALDFSGSTPLHLAAK 89
Query: 494 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 553
+ +++VE+LLK+GA + A + LH+A +++VE+LLK+GA + A + +
Sbjct: 90 RGHLEIVEVLLKYGADVNADDTIGSTPLHLAADTGHLEIVEVLLKYGADVNAQDKFGKTA 149
Query: 554 LHIACKKNRIKVVELL 569
I+ + E+L
Sbjct: 150 FDISIDNGNEDLAEIL 165
Score = 79.3 bits (194), Expect = 1e-14, Method: Composition-based stats.
Identities = 42/136 (30%), Positives = 76/136 (55%)
Query: 467 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 526
V +L+ +GA + A + LH+A + +++VE+LLK+GA + A LH+A K
Sbjct: 30 VRILMANGADVNAEDTYGDTPLHLAARVGHLEIVEVLLKNGADVNALDFSGSTPLHLAAK 89
Query: 527 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 586
+ +++VE+LLK+GA + A + LH+A +++VE+LLK+GA + A + +
Sbjct: 90 RGHLEIVEVLLKYGADVNADDTIGSTPLHLAADTGHLEIVEVLLKYGADVNAQDKFGKTA 149
Query: 587 LHIACKKNRIKVVELL 602
I+ + E+L
Sbjct: 150 FDISIDNGNEDLAEIL 165
Score = 79.3 bits (194), Expect = 1e-14, Method: Composition-based stats.
Identities = 42/136 (30%), Positives = 76/136 (55%)
Query: 500 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 559
V +L+ +GA + A + LH+A + +++VE+LLK+GA + A LH+A K
Sbjct: 30 VRILMANGADVNAEDTYGDTPLHLAARVGHLEIVEVLLKNGADVNALDFSGSTPLHLAAK 89
Query: 560 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 619
+ +++VE+LLK+GA + A + LH+A +++VE+LLK+GA + A + +
Sbjct: 90 RGHLEIVEVLLKYGADVNADDTIGSTPLHLAADTGHLEIVEVLLKYGADVNAQDKFGKTA 149
Query: 620 LHIACKKNRIKVVELL 635
I+ + E+L
Sbjct: 150 FDISIDNGNEDLAEIL 165
Score = 79.3 bits (194), Expect = 1e-14, Method: Composition-based stats.
Identities = 42/136 (30%), Positives = 76/136 (55%)
Query: 533 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 592
V +L+ +GA + A + LH+A + +++VE+LLK+GA + A LH+A K
Sbjct: 30 VRILMANGADVNAEDTYGDTPLHLAARVGHLEIVEVLLKNGADVNALDFSGSTPLHLAAK 89
Query: 593 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 652
+ +++VE+LLK+GA + A + LH+A +++VE+LLK+GA + A + +
Sbjct: 90 RGHLEIVEVLLKYGADVNADDTIGSTPLHLAADTGHLEIVEVLLKYGADVNAQDKFGKTA 149
Query: 653 LHIACKKNRIKVVELL 668
I+ + E+L
Sbjct: 150 FDISIDNGNEDLAEIL 165
Score = 79.3 bits (194), Expect = 1e-14, Method: Composition-based stats.
Identities = 42/136 (30%), Positives = 76/136 (55%)
Query: 566 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 625
V +L+ +GA + A + LH+A + +++VE+LLK+GA + A LH+A K
Sbjct: 30 VRILMANGADVNAEDTYGDTPLHLAARVGHLEIVEVLLKNGADVNALDFSGSTPLHLAAK 89
Query: 626 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 685
+ +++VE+LLK+GA + A + LH+A +++VE+LLK+GA + A + +
Sbjct: 90 RGHLEIVEVLLKYGADVNADDTIGSTPLHLAADTGHLEIVEVLLKYGADVNAQDKFGKTA 149
Query: 686 LHIACKKNRIKVVELL 701
I+ + E+L
Sbjct: 150 FDISIDNGNEDLAEIL 165
Score = 79.3 bits (194), Expect = 1e-14, Method: Composition-based stats.
Identities = 42/136 (30%), Positives = 76/136 (55%)
Query: 599 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 658
V +L+ +GA + A + LH+A + +++VE+LLK+GA + A LH+A K
Sbjct: 30 VRILMANGADVNAEDTYGDTPLHLAARVGHLEIVEVLLKNGADVNALDFSGSTPLHLAAK 89
Query: 659 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 718
+ +++VE+LLK+GA + A + LH+A +++VE+LLK+GA + A + +
Sbjct: 90 RGHLEIVEVLLKYGADVNADDTIGSTPLHLAADTGHLEIVEVLLKYGADVNAQDKFGKTA 149
Query: 719 LHIACKKNRIKVVELL 734
I+ + E+L
Sbjct: 150 FDISIDNGNEDLAEIL 165
Score = 79.3 bits (194), Expect = 1e-14, Method: Composition-based stats.
Identities = 42/136 (30%), Positives = 76/136 (55%)
Query: 632 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 691
V +L+ +GA + A + LH+A + +++VE+LLK+GA + A LH+A K
Sbjct: 30 VRILMANGADVNAEDTYGDTPLHLAARVGHLEIVEVLLKNGADVNALDFSGSTPLHLAAK 89
Query: 692 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 751
+ +++VE+LLK+GA + A + LH+A +++VE+LLK+GA + A + +
Sbjct: 90 RGHLEIVEVLLKYGADVNADDTIGSTPLHLAADTGHLEIVEVLLKYGADVNAQDKFGKTA 149
Query: 752 LHIACKKNRIKVVELL 767
I+ + E+L
Sbjct: 150 FDISIDNGNEDLAEIL 165
Score = 79.3 bits (194), Expect = 1e-14, Method: Composition-based stats.
Identities = 42/136 (30%), Positives = 76/136 (55%)
Query: 665 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 724
V +L+ +GA + A + LH+A + +++VE+LLK+GA + A LH+A K
Sbjct: 30 VRILMANGADVNAEDTYGDTPLHLAARVGHLEIVEVLLKNGADVNALDFSGSTPLHLAAK 89
Query: 725 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 784
+ +++VE+LLK+GA + A + LH+A +++VE+LLK+GA + A + +
Sbjct: 90 RGHLEIVEVLLKYGADVNADDTIGSTPLHLAADTGHLEIVEVLLKYGADVNAQDKFGKTA 149
Query: 785 LHIACKKNRIKVVELL 800
I+ + E+L
Sbjct: 150 FDISIDNGNEDLAEIL 165
Score = 79.3 bits (194), Expect = 1e-14, Method: Composition-based stats.
Identities = 42/136 (30%), Positives = 76/136 (55%)
Query: 698 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 757
V +L+ +GA + A + LH+A + +++VE+LLK+GA + A LH+A K
Sbjct: 30 VRILMANGADVNAEDTYGDTPLHLAARVGHLEIVEVLLKNGADVNALDFSGSTPLHLAAK 89
Query: 758 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 817
+ +++VE+LLK+GA + A + LH+A +++VE+LLK+GA + A + +
Sbjct: 90 RGHLEIVEVLLKYGADVNADDTIGSTPLHLAADTGHLEIVEVLLKYGADVNAQDKFGKTA 149
Query: 818 LHIACKKNRIKVVELL 833
I+ + E+L
Sbjct: 150 FDISIDNGNEDLAEIL 165
Score = 79.3 bits (194), Expect = 1e-14, Method: Composition-based stats.
Identities = 42/136 (30%), Positives = 76/136 (55%)
Query: 731 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 790
V +L+ +GA + A + LH+A + +++VE+LLK+GA + A LH+A K
Sbjct: 30 VRILMANGADVNAEDTYGDTPLHLAARVGHLEIVEVLLKNGADVNALDFSGSTPLHLAAK 89
Query: 791 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 850
+ +++VE+LLK+GA + A + LH+A +++VE+LLK+GA + A + +
Sbjct: 90 RGHLEIVEVLLKYGADVNADDTIGSTPLHLAADTGHLEIVEVLLKYGADVNAQDKFGKTA 149
Query: 851 LHIACKKNRIKVVELL 866
I+ + E+L
Sbjct: 150 FDISIDNGNEDLAEIL 165
Score = 79.3 bits (194), Expect = 1e-14, Method: Composition-based stats.
Identities = 42/136 (30%), Positives = 76/136 (55%)
Query: 764 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 823
V +L+ +GA + A + LH+A + +++VE+LLK+GA + A LH+A K
Sbjct: 30 VRILMANGADVNAEDTYGDTPLHLAARVGHLEIVEVLLKNGADVNALDFSGSTPLHLAAK 89
Query: 824 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 883
+ +++VE+LLK+GA + A + LH+A +++VE+LLK+GA + A + +
Sbjct: 90 RGHLEIVEVLLKYGADVNADDTIGSTPLHLAADTGHLEIVEVLLKYGADVNAQDKFGKTA 149
Query: 884 LHIACKKNRIKVVELL 899
I+ + E+L
Sbjct: 150 FDISIDNGNEDLAEIL 165
Score = 79.3 bits (194), Expect = 1e-14, Method: Composition-based stats.
Identities = 42/136 (30%), Positives = 76/136 (55%)
Query: 797 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 856
V +L+ +GA + A + LH+A + +++VE+LLK+GA + A LH+A K
Sbjct: 30 VRILMANGADVNAEDTYGDTPLHLAARVGHLEIVEVLLKNGADVNALDFSGSTPLHLAAK 89
Query: 857 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 916
+ +++VE+LLK+GA + A + LH+A +++VE+LLK+GA + A + +
Sbjct: 90 RGHLEIVEVLLKYGADVNADDTIGSTPLHLAADTGHLEIVEVLLKYGADVNAQDKFGKTA 149
Query: 917 LHIACKKNRIKVVELL 932
I+ + E+L
Sbjct: 150 FDISIDNGNEDLAEIL 165
Score = 77.0 bits (188), Expect = 6e-14, Method: Composition-based stats.
Identities = 41/137 (29%), Positives = 77/137 (56%)
Query: 830 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 889
V +L+ +GA + A + LH+A + +++VE+LLK+GA + A LH+A K
Sbjct: 30 VRILMANGADVNAEDTYGDTPLHLAARVGHLEIVEVLLKNGADVNALDFSGSTPLHLAAK 89
Query: 890 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASSHVVSCYSNVK 949
+ +++VE+LLK+GA + A + LH+A +++VE+LLK+GA + +
Sbjct: 90 RGHLEIVEVLLKYGADVNADDTIGSTPLHLAADTGHLEIVEVLLKYGADVNAQDKFGKTA 149
Query: 950 VHVSLNKIQDVSSSILR 966
+S++ + + IL+
Sbjct: 150 FDISIDNGNEDLAEILQ 166
Score = 77.0 bits (188), Expect = 6e-14, Method: Composition-based stats.
Identities = 49/120 (40%), Positives = 67/120 (55%), Gaps = 2/120 (1%)
Query: 1258 GFTPLHHSAQQGHSTIVALLLDRGASPNATN-KGFTPLHHSAQQGHSTIVALLLDRGASP 1316
G TPLH +A+ GH IV +LL GA NA + G TPLH +A++GH IV +LL GA
Sbjct: 47 GDTPLHLAARVGHLEIVEVLLKNGADVNALDFSGSTPLHLAAKRGHLEIVEVLLKYGADV 106
Query: 1317 NATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALL 1376
NA + T G TPLH+A G + + +LL A+V+ G T S G+ + +L
Sbjct: 107 NA-DDTIGSTPLHLAADTGHLEIVEVLLKYGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 75.9 bits (185), Expect = 1e-13, Method: Composition-based stats.
Identities = 55/169 (32%), Positives = 76/169 (44%), Gaps = 25/169 (14%)
Query: 1142 SASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKG 1201
+A G D +L+ +GADV+ G TPLHL A+ + + E+LLKN A V+ G
Sbjct: 21 AARAGQDDEVRILMANGADVNAEDTYGDTPLHLAARVGHLEIVEVLLKNGADVNALDFSG 80
Query: 1202 FTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRXXXXXXXXXXXXXXYTNTTDQGFTP 1261
TPLH+A G + + +LL A+V G TP
Sbjct: 81 STPLHLAAKRGHLEIVEVLLKYGADVNADDTI------------------------GSTP 116
Query: 1262 LHHSAQQGHSTIVALLLDRGASPNATNK-GFTPLHHSAQQGHSTIVALL 1309
LH +A GH IV +LL GA NA +K G T S G+ + +L
Sbjct: 117 LHLAADTGHLEIVEVLLKYGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 67.8 bits (164), Expect = 4e-11, Method: Composition-based stats.
Identities = 46/154 (29%), Positives = 81/154 (52%), Gaps = 26/154 (16%)
Query: 40 AAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPI-----SS 94
AA+ G+ + V +L++ GA+++ + G T LH AAR GH ++E+LL+ GA + S
Sbjct: 21 AARAGQDDEVRILMANGADVNAEDTYGDTPLHLAARVGHLEIVEVLLKNGADVNALDFSG 80
Query: 95 KTKVRGFYILRSGHEAVIEMLLEQGAPISSKTKVAAVLLENGASLTSTTKKGFTPLHLTG 154
T + + GH ++E+LL+ GA +++ + G TPLHL
Sbjct: 81 STPLH--LAAKRGHLEIVEVLLKYGADVNADDTI-----------------GSTPLHLAA 121
Query: 155 KYGHIKVAKLLLQKDAPVDFQGK--APVDDVTVD 186
GH+++ ++LL+ A V+ Q K D+++D
Sbjct: 122 DTGHLEIVEVLLKYGADVNAQDKFGKTAFDISID 155
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/96 (34%), Positives = 59/96 (61%), Gaps = 3/96 (3%)
Query: 35 TPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISS 94
TPLH+AA+ G +V +LL GA+++ G T LH AA+ GH ++E+LL+ GA +++
Sbjct: 49 TPLHLAARVGHLEIVEVLLKNGADVNALDFSGSTPLHLAAKRGHLEIVEVLLKYGADVNA 108
Query: 95 KTKVRGFYI---LRSGHEAVIEMLLEQGAPISSKTK 127
+ + +GH ++E+LL+ GA ++++ K
Sbjct: 109 DDTIGSTPLHLAADTGHLEIVEVLLKYGADVNAQDK 144
Score = 55.1 bits (131), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 53/84 (63%), Gaps = 3/84 (3%)
Query: 35 TPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISS 94
TPLH+AAK G +V +LL GA+++ G T LH AA +GH ++E+LL+ GA +++
Sbjct: 82 TPLHLAAKRGHLEIVEVLLKYGADVNADDTIGSTPLHLAADTGHLEIVEVLLKYGADVNA 141
Query: 95 KTKV--RGFYI-LRSGHEAVIEML 115
+ K F I + +G+E + E+L
Sbjct: 142 QDKFGKTAFDISIDNGNEDLAEIL 165
>pdb|1UOH|A Chain A, Human Gankyrin
pdb|1TR4|A Chain A, Solution Structure Of Human Oncogenic Protein Gankyrin
Length = 226
Score = 100 bits (250), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 99/190 (52%), Gaps = 13/190 (6%)
Query: 1019 TTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQK 1078
T +D TALH A G E+ LL+ G + G++PLH+ G ++ K LL K
Sbjct: 36 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGK 95
Query: 1079 DAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTP 1138
A V+ +NG TPLH A+ + +A++LLE GA+ D AK + E+ T
Sbjct: 96 GAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPD---------AKDHYEA----TA 142
Query: 1139 LHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPT 1198
+H +A++G+ M +LL + A + G TPLHL E+RV A+LL+ A +
Sbjct: 143 MHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIEN 202
Query: 1199 KKGFTPLHIA 1208
K+ TPL +A
Sbjct: 203 KEEKTPLQVA 212
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 90/174 (51%), Gaps = 10/174 (5%)
Query: 140 TSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKAPVDDVTVDYLTALHVAAHCGH 199
T T + T LH GH ++ + LLQ PV+ + DD + LH+AA G
Sbjct: 34 TRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDK-----DDAG---WSPLHIAASAGR 85
Query: 200 ARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHI 259
+ K LL K A NA NG TPLH A KNR ++ +LL+ GA+ +A +H
Sbjct: 86 DEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHR 145
Query: 260 ACKKNRIKVVELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASI 312
A K +K++ +LL + AS TE P LH+AC + R++ +LL+ GASI
Sbjct: 146 AAAKGNLKMIHILLYYKASTNIQDTEGNTP-LHLACDEERVEEAKLLVSQGASI 198
Score = 90.5 bits (223), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 85/161 (52%), Gaps = 2/161 (1%)
Query: 186 DYLTALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGAS 245
D TALH A GH + + LL N + G++PLHIA R ++V+ LL GA
Sbjct: 39 DSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQ 98
Query: 246 IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 305
+ A + LH A KNR ++ +LL+ GA+ +A +H A K +K++ +L
Sbjct: 99 VNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHIL 158
Query: 306 LKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASI 345
L + AS TE P LH+AC + R++ +LL+ GASI
Sbjct: 159 LYYKASTNIQDTEGNTP-LHLACDEERVEEAKLLVSQGASI 198
Score = 87.4 bits (215), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 90/178 (50%), Gaps = 7/178 (3%)
Query: 202 VAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIAC 261
+A L + D ++R T LH AC ++VE LL+ G + + LHIA
Sbjct: 27 LADKSLATRTDQDSR-----TALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAA 81
Query: 262 KKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREP 321
R ++V+ LL GA + A + LH A KNR ++ +LL+ GA+ +A
Sbjct: 82 SAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEAT 141
Query: 322 MLHIACKKNRIKVVELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASI 378
+H A K +K++ +LL + AS TE P LH+AC + R++ +LL+ GASI
Sbjct: 142 AMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTP-LHLACDEERVEEAKLLVSQGASI 198
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 83/164 (50%), Gaps = 2/164 (1%)
Query: 249 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 308
T + LH AC ++VE LL+ G + + LHIA R ++V+ LL
Sbjct: 36 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGK 95
Query: 309 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 368
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K++
Sbjct: 96 GAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMI 155
Query: 369 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASI 411
+LL + AS TE P LH+AC + R++ +LL+ GASI
Sbjct: 156 HILLYYKASTNIQDTEGNTP-LHLACDEERVEEAKLLVSQGASI 198
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 83/164 (50%), Gaps = 2/164 (1%)
Query: 282 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 341
T + LH AC ++VE LL+ G + + LHIA R ++V+ LL
Sbjct: 36 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGK 95
Query: 342 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 401
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K++
Sbjct: 96 GAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMI 155
Query: 402 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASI 444
+LL + AS TE P LH+AC + R++ +LL+ GASI
Sbjct: 156 HILLYYKASTNIQDTEGNTP-LHLACDEERVEEAKLLVSQGASI 198
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 83/164 (50%), Gaps = 2/164 (1%)
Query: 315 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 374
T + LH AC ++VE LL+ G + + LHIA R ++V+ LL
Sbjct: 36 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGK 95
Query: 375 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 434
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K++
Sbjct: 96 GAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMI 155
Query: 435 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASI 477
+LL + AS TE P LH+AC + R++ +LL+ GASI
Sbjct: 156 HILLYYKASTNIQDTEGNTP-LHLACDEERVEEAKLLVSQGASI 198
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 83/164 (50%), Gaps = 2/164 (1%)
Query: 348 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 407
T + LH AC ++VE LL+ G + + LHIA R ++V+ LL
Sbjct: 36 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGK 95
Query: 408 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 467
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K++
Sbjct: 96 GAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMI 155
Query: 468 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASI 510
+LL + AS TE P LH+AC + R++ +LL+ GASI
Sbjct: 156 HILLYYKASTNIQDTEGNTP-LHLACDEERVEEAKLLVSQGASI 198
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 83/164 (50%), Gaps = 2/164 (1%)
Query: 381 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 440
T + LH AC ++VE LL+ G + + LHIA R ++V+ LL
Sbjct: 36 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGK 95
Query: 441 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 500
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K++
Sbjct: 96 GAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMI 155
Query: 501 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASI 543
+LL + AS TE P LH+AC + R++ +LL+ GASI
Sbjct: 156 HILLYYKASTNIQDTEGNTP-LHLACDEERVEEAKLLVSQGASI 198
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 83/164 (50%), Gaps = 2/164 (1%)
Query: 414 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 473
T + LH AC ++VE LL+ G + + LHIA R ++V+ LL
Sbjct: 36 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGK 95
Query: 474 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 533
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K++
Sbjct: 96 GAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMI 155
Query: 534 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASI 576
+LL + AS TE P LH+AC + R++ +LL+ GASI
Sbjct: 156 HILLYYKASTNIQDTEGNTP-LHLACDEERVEEAKLLVSQGASI 198
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 83/164 (50%), Gaps = 2/164 (1%)
Query: 447 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 506
T + LH AC ++VE LL+ G + + LHIA R ++V+ LL
Sbjct: 36 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGK 95
Query: 507 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 566
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K++
Sbjct: 96 GAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMI 155
Query: 567 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASI 609
+LL + AS TE P LH+AC + R++ +LL+ GASI
Sbjct: 156 HILLYYKASTNIQDTEGNTP-LHLACDEERVEEAKLLVSQGASI 198
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 83/164 (50%), Gaps = 2/164 (1%)
Query: 480 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 539
T + LH AC ++VE LL+ G + + LHIA R ++V+ LL
Sbjct: 36 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGK 95
Query: 540 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 599
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K++
Sbjct: 96 GAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMI 155
Query: 600 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASI 642
+LL + AS TE P LH+AC + R++ +LL+ GASI
Sbjct: 156 HILLYYKASTNIQDTEGNTP-LHLACDEERVEEAKLLVSQGASI 198
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 83/164 (50%), Gaps = 2/164 (1%)
Query: 513 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 572
T + LH AC ++VE LL+ G + + LHIA R ++V+ LL
Sbjct: 36 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGK 95
Query: 573 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 632
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K++
Sbjct: 96 GAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMI 155
Query: 633 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASI 675
+LL + AS TE P LH+AC + R++ +LL+ GASI
Sbjct: 156 HILLYYKASTNIQDTEGNTP-LHLACDEERVEEAKLLVSQGASI 198
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 83/164 (50%), Gaps = 2/164 (1%)
Query: 546 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 605
T + LH AC ++VE LL+ G + + LHIA R ++V+ LL
Sbjct: 36 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGK 95
Query: 606 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 665
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K++
Sbjct: 96 GAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMI 155
Query: 666 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASI 708
+LL + AS TE P LH+AC + R++ +LL+ GASI
Sbjct: 156 HILLYYKASTNIQDTEGNTP-LHLACDEERVEEAKLLVSQGASI 198
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 83/164 (50%), Gaps = 2/164 (1%)
Query: 579 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 638
T + LH AC ++VE LL+ G + + LHIA R ++V+ LL
Sbjct: 36 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGK 95
Query: 639 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 698
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K++
Sbjct: 96 GAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMI 155
Query: 699 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASI 741
+LL + AS TE P LH+AC + R++ +LL+ GASI
Sbjct: 156 HILLYYKASTNIQDTEGNTP-LHLACDEERVEEAKLLVSQGASI 198
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 83/164 (50%), Gaps = 2/164 (1%)
Query: 612 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 671
T + LH AC ++VE LL+ G + + LHIA R ++V+ LL
Sbjct: 36 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGK 95
Query: 672 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 731
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K++
Sbjct: 96 GAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMI 155
Query: 732 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASI 774
+LL + AS TE P LH+AC + R++ +LL+ GASI
Sbjct: 156 HILLYYKASTNIQDTEGNTP-LHLACDEERVEEAKLLVSQGASI 198
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 83/164 (50%), Gaps = 2/164 (1%)
Query: 645 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 704
T + LH AC ++VE LL+ G + + LHIA R ++V+ LL
Sbjct: 36 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGK 95
Query: 705 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 764
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K++
Sbjct: 96 GAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMI 155
Query: 765 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASI 807
+LL + AS TE P LH+AC + R++ +LL+ GASI
Sbjct: 156 HILLYYKASTNIQDTEGNTP-LHLACDEERVEEAKLLVSQGASI 198
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 83/164 (50%), Gaps = 2/164 (1%)
Query: 678 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 737
T + LH AC ++VE LL+ G + + LHIA R ++V+ LL
Sbjct: 36 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGK 95
Query: 738 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 797
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K++
Sbjct: 96 GAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMI 155
Query: 798 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASI 840
+LL + AS TE P LH+AC + R++ +LL+ GASI
Sbjct: 156 HILLYYKASTNIQDTEGNTP-LHLACDEERVEEAKLLVSQGASI 198
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 83/164 (50%), Gaps = 2/164 (1%)
Query: 711 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 770
T + LH AC ++VE LL+ G + + LHIA R ++V+ LL
Sbjct: 36 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGK 95
Query: 771 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 830
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K++
Sbjct: 96 GAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMI 155
Query: 831 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASI 873
+LL + AS TE P LH+AC + R++ +LL+ GASI
Sbjct: 156 HILLYYKASTNIQDTEGNTP-LHLACDEERVEEAKLLVSQGASI 198
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 83/164 (50%), Gaps = 2/164 (1%)
Query: 744 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 803
T + LH AC ++VE LL+ G + + LHIA R ++V+ LL
Sbjct: 36 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGK 95
Query: 804 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 863
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K++
Sbjct: 96 GAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMI 155
Query: 864 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASI 906
+LL + AS TE P LH+AC + R++ +LL+ GASI
Sbjct: 156 HILLYYKASTNIQDTEGNTP-LHLACDEERVEEAKLLVSQGASI 198
Score = 84.3 bits (207), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 84/166 (50%), Gaps = 2/166 (1%)
Query: 777 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 836
T + LH AC ++VE LL+ G + + LHIA R ++V+ LL
Sbjct: 36 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGK 95
Query: 837 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 896
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K++
Sbjct: 96 GAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMI 155
Query: 897 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASSHV 941
+LL + AS TE P LH+AC + R++ +LL+ GAS ++
Sbjct: 156 HILLYYKASTNIQDTEGNTP-LHLACDEERVEEAKLLVSQGASIYI 200
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 86/187 (45%), Gaps = 26/187 (13%)
Query: 1203 TPLHIACHYGQISMARLLLDQSANVTVPKNFPSRXXXXXXXXXXXXXXYTNTTDQGFTPL 1262
T LH AC G + LL + VP N + D G++PL
Sbjct: 42 TALHWACSAGHTEIVEFLL----QLGVPVN--------------------DKDDAGWSPL 77
Query: 1263 HHSAQQGHSTIVALLLDRGASPNATNK-GFTPLHHSAQQGHSTIVALLLDRGASPNATNK 1321
H +A G IV LL +GA NA N+ G TPLH++A + I +LL+ GA+P+A +
Sbjct: 78 HIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDH 137
Query: 1322 TRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGA 1381
T +H A G + M +LL A+ + +G TPLH + + LL+ +GA
Sbjct: 138 YEA-TAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGA 196
Query: 1382 SPNATNK 1388
S NK
Sbjct: 197 SIYIENK 203
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 89/187 (47%), Gaps = 13/187 (6%)
Query: 988 REQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGA 1047
++ +T LH A G+ +IV LLQ G V+ ++ LHIAA G++E+ LL GA
Sbjct: 38 QDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGA 97
Query: 1048 SLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALL 1107
+ + + G TPLH ++A +LL+ A D + T +H A+
Sbjct: 98 QVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAA---------- 147
Query: 1108 LLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKN 1167
KG ++ + LL Y A N + G TPLHL+ E + + +L+ GA + K
Sbjct: 148 --AKG-NLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIENKE 204
Query: 1168 GLTPLHL 1174
TPL +
Sbjct: 205 EKTPLQV 211
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 92/195 (47%), Gaps = 28/195 (14%)
Query: 1170 TPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTV 1229
T LH + E LL+ V+ G++PLHIA G+ + + LL + A V
Sbjct: 42 TALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQV-- 99
Query: 1230 PKNFPSRXXXXXXXXXXXXXXYTNTTDQ-GFTPLHHSAQQGHSTIVALLLDRGASPNATN 1288
N +Q G TPLH++A + I +LL+ GA+P+A +
Sbjct: 100 -----------------------NAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKD 136
Query: 1289 -KGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQS 1347
T +H +A +G+ ++ +LL AS N + T G TPLH+AC ++ A+LL+ Q
Sbjct: 137 HYEATAMHRAAAKGNLKMIHILLYYKASTNIQD-TEGNTPLHLACDEERVEEAKLLVSQG 195
Query: 1348 ANVSCTTDQGFTPLH 1362
A++ + TPL
Sbjct: 196 ASIYIENKEEKTPLQ 210
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 88/188 (46%), Gaps = 11/188 (5%)
Query: 810 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 869
T + LH AC ++VE LL+ G + + LHIA R ++V+ LL
Sbjct: 36 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGK 95
Query: 870 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 929
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K++
Sbjct: 96 GAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMI 155
Query: 930 ELLLKHGASSHVVSCYSNVKVHVSLNKIQDVSSSILRLATCDVLPQCETRLNFSNLRVRE 989
+LL + AS+++ N +H++ ++ R+ +L + N +E
Sbjct: 156 HILLYYKASTNIQDTEGNTPLHLACDE--------ERVEEAKLLVSQGASIYIEN---KE 204
Query: 990 QQTPLHIA 997
++TPL +A
Sbjct: 205 EKTPLQVA 212
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 89/196 (45%), Gaps = 26/196 (13%)
Query: 1137 TPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDT 1196
T LH + S GH ++ LL+ G V+ G +PLH+ A R + + LL AQV+
Sbjct: 42 TALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNA 101
Query: 1197 PTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRXXXXXXXXXXXXXXYTNTTD 1256
+ G TPLH A + +A +LL+ AN ++ +
Sbjct: 102 VNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEA--------------------- 140
Query: 1257 QGFTPLHHSAQQGHSTIVALLLDRGASPNATN-KGFTPLHHSAQQGHSTIVALLLDRGAS 1315
T +H +A +G+ ++ +LL AS N + +G TPLH + + LL+ +GAS
Sbjct: 141 ---TAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGAS 197
Query: 1316 PNATNKTRGFTPLHIA 1331
NK TPL +A
Sbjct: 198 IYIENKEE-KTPLQVA 212
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 79/175 (45%), Gaps = 26/175 (14%)
Query: 1116 DIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLC 1175
+I LL+ G N + AG++PLH++AS G ++ LL GA V+ +NG TPLH
Sbjct: 54 EIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYA 113
Query: 1176 AQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPS 1235
A ++R +A +LL+ A D T +H A G + M +LL A+
Sbjct: 114 ASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKAS--------- 164
Query: 1236 RXXXXXXXXXXXXXXYTNTTD-QGFTPLHHSAQQGHSTIVALLLDRGASPNATNK 1289
TN D +G TPLH + + LL+ +GAS NK
Sbjct: 165 ----------------TNIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIENK 203
Score = 68.2 bits (165), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 92/223 (41%), Gaps = 48/223 (21%)
Query: 876 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 935
T + LH AC ++VE LL+ G + + LHIA R ++V+ LL
Sbjct: 36 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGK 95
Query: 936 GASSHVVSCYSNVKVHVSLNKIQDVSSSILRLATCDVLPQCETRLNFSNLRVREQQTPLH 995
GA + V+ + TPLH
Sbjct: 96 GAQVNAVN--------------------------------------------QNGCTPLH 111
Query: 996 IASRLGNVDIVMLLLQHGAAVDSTTKDLY--TALHIAAKEGQEEVAAVLLENGASLTSTT 1053
A+ +I ++LL+ GA D+ KD Y TA+H AA +G ++ +LL AS
Sbjct: 112 YAASKNRHEIAVMLLEGGANPDA--KDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQD 169
Query: 1054 KKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVA 1096
+G TPLHL ++ AKLL+ + A + + K TPL VA
Sbjct: 170 TEGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVA 212
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 68/153 (44%), Gaps = 14/153 (9%)
Query: 25 PFGSHFQHNITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEM 84
P +PLH+AA G+ +V LL +GA ++ ++G T LH AA + M
Sbjct: 65 PVNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVM 124
Query: 85 LLEQGAPISSKTKVRGFYILRSGHEAVIEMLLEQGAPISSKTKVAAVLLENGASLTSTTK 144
LLE GA +K + R+ + ++M+ +LL AS
Sbjct: 125 LLEGGANPDAKDHYEATAMHRAAAKGNLKMI--------------HILLYYKASTNIQDT 170
Query: 145 KGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGK 177
+G TPLHL ++ AKLL+ + A + + K
Sbjct: 171 EGNTPLHLACDEERVEEAKLLVSQGASIYIENK 203
>pdb|1QYM|A Chain A, X-Ray Structure Of Human Gankyrin
Length = 227
Score = 100 bits (250), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 99/190 (52%), Gaps = 13/190 (6%)
Query: 1019 TTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQK 1078
T +D TALH A G E+ LL+ G + G++PLH+ G ++ K LL K
Sbjct: 37 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGK 96
Query: 1079 DAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTP 1138
A V+ +NG TPLH A+ + +A++LLE GA+ D AK + E+ T
Sbjct: 97 GAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPD---------AKDHYEA----TA 143
Query: 1139 LHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPT 1198
+H +A++G+ M +LL + A + G TPLHL E+RV A+LL+ A +
Sbjct: 144 MHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIEN 203
Query: 1199 KKGFTPLHIA 1208
K+ TPL +A
Sbjct: 204 KEEKTPLQVA 213
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 95/188 (50%), Gaps = 10/188 (5%)
Query: 140 TSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKAPVDDVTVDYLTALHVAAHCGH 199
T T + T LH GH ++ + LLQ PV+ + DD + LH+AA G
Sbjct: 35 TRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDK-----DDAG---WSPLHIAASAGR 86
Query: 200 ARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHI 259
+ K LL K A NA NG TPLH A KNR ++ +LL+ GA+ +A +H
Sbjct: 87 DEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHR 146
Query: 260 ACKKNRIKVVELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEV 318
A K +K++ +LL + AS TE P LH+AC + R++ +LL+ GASI +
Sbjct: 147 AAAKGNLKMIHILLYYKASTNIQDTEGNTP-LHLACDEERVEEAKLLVSQGASIYIENKE 205
Query: 319 REPMLHIA 326
+ L +A
Sbjct: 206 EKTPLQVA 213
Score = 90.9 bits (224), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 90/175 (51%), Gaps = 2/175 (1%)
Query: 186 DYLTALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGAS 245
D TALH A GH + + LL N + G++PLHIA R ++V+ LL GA
Sbjct: 40 DSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQ 99
Query: 246 IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 305
+ A + LH A KNR ++ +LL+ GA+ +A +H A K +K++ +L
Sbjct: 100 VNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHIL 159
Query: 306 LKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 359
L + AS TE P LH+AC + R++ +LL+ GASI + + L +A
Sbjct: 160 LYYKASTNIQDTEGNTP-LHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVA 213
Score = 87.8 bits (216), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 95/192 (49%), Gaps = 7/192 (3%)
Query: 202 VAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIAC 261
+A L + D ++R T LH AC ++VE LL+ G + + LHIA
Sbjct: 28 LADKSLATRTDQDSR-----TALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAA 82
Query: 262 KKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREP 321
R ++V+ LL GA + A + LH A KNR ++ +LL+ GA+ +A
Sbjct: 83 SAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEAT 142
Query: 322 MLHIACKKNRIKVVELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASIEA 380
+H A K +K++ +LL + AS TE P LH+AC + R++ +LL+ GASI
Sbjct: 143 AMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTP-LHLACDEERVEEAKLLVSQGASIYI 201
Query: 381 TTEVREPMLHIA 392
+ + L +A
Sbjct: 202 ENKEEKTPLQVA 213
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 88/178 (49%), Gaps = 2/178 (1%)
Query: 249 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 308
T + LH AC ++VE LL+ G + + LHIA R ++V+ LL
Sbjct: 37 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGK 96
Query: 309 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 368
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K++
Sbjct: 97 GAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMI 156
Query: 369 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 425
+LL + AS TE P LH+AC + R++ +LL+ GASI + + L +A
Sbjct: 157 HILLYYKASTNIQDTEGNTP-LHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVA 213
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 88/178 (49%), Gaps = 2/178 (1%)
Query: 282 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 341
T + LH AC ++VE LL+ G + + LHIA R ++V+ LL
Sbjct: 37 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGK 96
Query: 342 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 401
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K++
Sbjct: 97 GAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMI 156
Query: 402 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 458
+LL + AS TE P LH+AC + R++ +LL+ GASI + + L +A
Sbjct: 157 HILLYYKASTNIQDTEGNTP-LHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVA 213
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 88/178 (49%), Gaps = 2/178 (1%)
Query: 315 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 374
T + LH AC ++VE LL+ G + + LHIA R ++V+ LL
Sbjct: 37 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGK 96
Query: 375 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 434
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K++
Sbjct: 97 GAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMI 156
Query: 435 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 491
+LL + AS TE P LH+AC + R++ +LL+ GASI + + L +A
Sbjct: 157 HILLYYKASTNIQDTEGNTP-LHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVA 213
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 88/178 (49%), Gaps = 2/178 (1%)
Query: 348 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 407
T + LH AC ++VE LL+ G + + LHIA R ++V+ LL
Sbjct: 37 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGK 96
Query: 408 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 467
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K++
Sbjct: 97 GAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMI 156
Query: 468 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 524
+LL + AS TE P LH+AC + R++ +LL+ GASI + + L +A
Sbjct: 157 HILLYYKASTNIQDTEGNTP-LHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVA 213
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 88/178 (49%), Gaps = 2/178 (1%)
Query: 381 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 440
T + LH AC ++VE LL+ G + + LHIA R ++V+ LL
Sbjct: 37 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGK 96
Query: 441 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 500
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K++
Sbjct: 97 GAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMI 156
Query: 501 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 557
+LL + AS TE P LH+AC + R++ +LL+ GASI + + L +A
Sbjct: 157 HILLYYKASTNIQDTEGNTP-LHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVA 213
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 88/178 (49%), Gaps = 2/178 (1%)
Query: 414 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 473
T + LH AC ++VE LL+ G + + LHIA R ++V+ LL
Sbjct: 37 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGK 96
Query: 474 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 533
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K++
Sbjct: 97 GAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMI 156
Query: 534 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 590
+LL + AS TE P LH+AC + R++ +LL+ GASI + + L +A
Sbjct: 157 HILLYYKASTNIQDTEGNTP-LHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVA 213
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 88/178 (49%), Gaps = 2/178 (1%)
Query: 447 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 506
T + LH AC ++VE LL+ G + + LHIA R ++V+ LL
Sbjct: 37 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGK 96
Query: 507 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 566
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K++
Sbjct: 97 GAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMI 156
Query: 567 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 623
+LL + AS TE P LH+AC + R++ +LL+ GASI + + L +A
Sbjct: 157 HILLYYKASTNIQDTEGNTP-LHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVA 213
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 88/178 (49%), Gaps = 2/178 (1%)
Query: 480 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 539
T + LH AC ++VE LL+ G + + LHIA R ++V+ LL
Sbjct: 37 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGK 96
Query: 540 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 599
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K++
Sbjct: 97 GAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMI 156
Query: 600 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 656
+LL + AS TE P LH+AC + R++ +LL+ GASI + + L +A
Sbjct: 157 HILLYYKASTNIQDTEGNTP-LHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVA 213
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 88/178 (49%), Gaps = 2/178 (1%)
Query: 513 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 572
T + LH AC ++VE LL+ G + + LHIA R ++V+ LL
Sbjct: 37 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGK 96
Query: 573 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 632
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K++
Sbjct: 97 GAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMI 156
Query: 633 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 689
+LL + AS TE P LH+AC + R++ +LL+ GASI + + L +A
Sbjct: 157 HILLYYKASTNIQDTEGNTP-LHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVA 213
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 88/178 (49%), Gaps = 2/178 (1%)
Query: 546 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 605
T + LH AC ++VE LL+ G + + LHIA R ++V+ LL
Sbjct: 37 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGK 96
Query: 606 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 665
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K++
Sbjct: 97 GAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMI 156
Query: 666 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 722
+LL + AS TE P LH+AC + R++ +LL+ GASI + + L +A
Sbjct: 157 HILLYYKASTNIQDTEGNTP-LHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVA 213
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 88/178 (49%), Gaps = 2/178 (1%)
Query: 579 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 638
T + LH AC ++VE LL+ G + + LHIA R ++V+ LL
Sbjct: 37 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGK 96
Query: 639 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 698
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K++
Sbjct: 97 GAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMI 156
Query: 699 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 755
+LL + AS TE P LH+AC + R++ +LL+ GASI + + L +A
Sbjct: 157 HILLYYKASTNIQDTEGNTP-LHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVA 213
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 88/178 (49%), Gaps = 2/178 (1%)
Query: 612 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 671
T + LH AC ++VE LL+ G + + LHIA R ++V+ LL
Sbjct: 37 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGK 96
Query: 672 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 731
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K++
Sbjct: 97 GAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMI 156
Query: 732 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 788
+LL + AS TE P LH+AC + R++ +LL+ GASI + + L +A
Sbjct: 157 HILLYYKASTNIQDTEGNTP-LHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVA 213
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 88/178 (49%), Gaps = 2/178 (1%)
Query: 645 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 704
T + LH AC ++VE LL+ G + + LHIA R ++V+ LL
Sbjct: 37 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGK 96
Query: 705 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 764
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K++
Sbjct: 97 GAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMI 156
Query: 765 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 821
+LL + AS TE P LH+AC + R++ +LL+ GASI + + L +A
Sbjct: 157 HILLYYKASTNIQDTEGNTP-LHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVA 213
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 88/178 (49%), Gaps = 2/178 (1%)
Query: 678 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 737
T + LH AC ++VE LL+ G + + LHIA R ++V+ LL
Sbjct: 37 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGK 96
Query: 738 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 797
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K++
Sbjct: 97 GAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMI 156
Query: 798 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 854
+LL + AS TE P LH+AC + R++ +LL+ GASI + + L +A
Sbjct: 157 HILLYYKASTNIQDTEGNTP-LHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVA 213
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 88/178 (49%), Gaps = 2/178 (1%)
Query: 711 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 770
T + LH AC ++VE LL+ G + + LHIA R ++V+ LL
Sbjct: 37 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGK 96
Query: 771 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 830
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K++
Sbjct: 97 GAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMI 156
Query: 831 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 887
+LL + AS TE P LH+AC + R++ +LL+ GASI + + L +A
Sbjct: 157 HILLYYKASTNIQDTEGNTP-LHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVA 213
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 88/178 (49%), Gaps = 2/178 (1%)
Query: 744 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 803
T + LH AC ++VE LL+ G + + LHIA R ++V+ LL
Sbjct: 37 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGK 96
Query: 804 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 863
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K++
Sbjct: 97 GAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMI 156
Query: 864 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 920
+LL + AS TE P LH+AC + R++ +LL+ GASI + + L +A
Sbjct: 157 HILLYYKASTNIQDTEGNTP-LHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVA 213
Score = 84.7 bits (208), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 84/166 (50%), Gaps = 2/166 (1%)
Query: 777 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 836
T + LH AC ++VE LL+ G + + LHIA R ++V+ LL
Sbjct: 37 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGK 96
Query: 837 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 896
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K++
Sbjct: 97 GAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMI 156
Query: 897 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASSHV 941
+LL + AS TE P LH+AC + R++ +LL+ GAS ++
Sbjct: 157 HILLYYKASTNIQDTEGNTP-LHLACDEERVEEAKLLVSQGASIYI 201
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 86/187 (45%), Gaps = 26/187 (13%)
Query: 1203 TPLHIACHYGQISMARLLLDQSANVTVPKNFPSRXXXXXXXXXXXXXXYTNTTDQGFTPL 1262
T LH AC G + LL + VP N + D G++PL
Sbjct: 43 TALHWACSAGHTEIVEFLL----QLGVPVN--------------------DKDDAGWSPL 78
Query: 1263 HHSAQQGHSTIVALLLDRGASPNATNK-GFTPLHHSAQQGHSTIVALLLDRGASPNATNK 1321
H +A G IV LL +GA NA N+ G TPLH++A + I +LL+ GA+P+A +
Sbjct: 79 HIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDH 138
Query: 1322 TRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGA 1381
T +H A G + M +LL A+ + +G TPLH + + LL+ +GA
Sbjct: 139 YEA-TAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGA 197
Query: 1382 SPNATNK 1388
S NK
Sbjct: 198 SIYIENK 204
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 92/195 (47%), Gaps = 28/195 (14%)
Query: 1170 TPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTV 1229
T LH + E LL+ V+ G++PLHIA G+ + + LL + A V
Sbjct: 43 TALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQV-- 100
Query: 1230 PKNFPSRXXXXXXXXXXXXXXYTNTTDQ-GFTPLHHSAQQGHSTIVALLLDRGASPNATN 1288
N +Q G TPLH++A + I +LL+ GA+P+A +
Sbjct: 101 -----------------------NAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKD 137
Query: 1289 -KGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQS 1347
T +H +A +G+ ++ +LL AS N + T G TPLH+AC ++ A+LL+ Q
Sbjct: 138 HYEATAMHRAAAKGNLKMIHILLYYKASTNIQD-TEGNTPLHLACDEERVEEAKLLVSQG 196
Query: 1348 ANVSCTTDQGFTPLH 1362
A++ + TPL
Sbjct: 197 ASIYIENKEEKTPLQ 211
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 70/126 (55%)
Query: 992 TPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTS 1051
+PLHIA+ G +IV LL GA V++ ++ T LH AA + + E+A +LLE GA+ +
Sbjct: 76 SPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDA 135
Query: 1052 TTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEK 1111
T +H G++K+ +LL A + Q G TPLH+A + A LL+ +
Sbjct: 136 KDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAKLLVSQ 195
Query: 1112 GASMDI 1117
GAS+ I
Sbjct: 196 GASIYI 201
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 88/188 (46%), Gaps = 11/188 (5%)
Query: 810 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 869
T + LH AC ++VE LL+ G + + LHIA R ++V+ LL
Sbjct: 37 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGK 96
Query: 870 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 929
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K++
Sbjct: 97 GAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMI 156
Query: 930 ELLLKHGASSHVVSCYSNVKVHVSLNKIQDVSSSILRLATCDVLPQCETRLNFSNLRVRE 989
+LL + AS+++ N +H++ ++ R+ +L + N +E
Sbjct: 157 HILLYYKASTNIQDTEGNTPLHLACDE--------ERVEEAKLLVSQGASIYIEN---KE 205
Query: 990 QQTPLHIA 997
++TPL +A
Sbjct: 206 EKTPLQVA 213
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 89/196 (45%), Gaps = 26/196 (13%)
Query: 1137 TPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDT 1196
T LH + S GH ++ LL+ G V+ G +PLH+ A R + + LL AQV+
Sbjct: 43 TALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNA 102
Query: 1197 PTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRXXXXXXXXXXXXXXYTNTTD 1256
+ G TPLH A + +A +LL+ AN ++ +
Sbjct: 103 VNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEA--------------------- 141
Query: 1257 QGFTPLHHSAQQGHSTIVALLLDRGASPNATN-KGFTPLHHSAQQGHSTIVALLLDRGAS 1315
T +H +A +G+ ++ +LL AS N + +G TPLH + + LL+ +GAS
Sbjct: 142 ---TAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGAS 198
Query: 1316 PNATNKTRGFTPLHIA 1331
NK TPL +A
Sbjct: 199 IYIENKEE-KTPLQVA 213
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 79/175 (45%), Gaps = 26/175 (14%)
Query: 1116 DIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLC 1175
+I LL+ G N + AG++PLH++AS G ++ LL GA V+ +NG TPLH
Sbjct: 55 EIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYA 114
Query: 1176 AQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPS 1235
A ++R +A +LL+ A D T +H A G + M +LL A+
Sbjct: 115 ASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKAS--------- 165
Query: 1236 RXXXXXXXXXXXXXXYTNTTD-QGFTPLHHSAQQGHSTIVALLLDRGASPNATNK 1289
TN D +G TPLH + + LL+ +GAS NK
Sbjct: 166 ----------------TNIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIENK 204
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 92/223 (41%), Gaps = 48/223 (21%)
Query: 876 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 935
T + LH AC ++VE LL+ G + + LHIA R ++V+ LL
Sbjct: 37 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGK 96
Query: 936 GASSHVVSCYSNVKVHVSLNKIQDVSSSILRLATCDVLPQCETRLNFSNLRVREQQTPLH 995
GA + V+ + TPLH
Sbjct: 97 GAQVNAVN--------------------------------------------QNGCTPLH 112
Query: 996 IASRLGNVDIVMLLLQHGAAVDSTTKDLY--TALHIAAKEGQEEVAAVLLENGASLTSTT 1053
A+ +I ++LL+ GA D+ KD Y TA+H AA +G ++ +LL AS
Sbjct: 113 YAASKNRHEIAVMLLEGGANPDA--KDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQD 170
Query: 1054 KKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVA 1096
+G TPLHL ++ AKLL+ + A + + K TPL VA
Sbjct: 171 TEGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVA 213
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 68/153 (44%), Gaps = 14/153 (9%)
Query: 25 PFGSHFQHNITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEM 84
P +PLH+AA G+ +V LL +GA ++ ++G T LH AA + M
Sbjct: 66 PVNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVM 125
Query: 85 LLEQGAPISSKTKVRGFYILRSGHEAVIEMLLEQGAPISSKTKVAAVLLENGASLTSTTK 144
LLE GA +K + R+ + ++M+ +LL AS
Sbjct: 126 LLEGGANPDAKDHYEATAMHRAAAKGNLKMI--------------HILLYYKASTNIQDT 171
Query: 145 KGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGK 177
+G TPLHL ++ AKLL+ + A + + K
Sbjct: 172 EGNTPLHLACDEERVEEAKLLVSQGASIYIENK 204
>pdb|4F6R|D Chain D, Tubulin:stathmin-Like Domain Complex
Length = 169
Score = 100 bits (250), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 92/170 (54%), Gaps = 13/170 (7%)
Query: 1022 DLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAP 1081
DL L AA+ GQ++ +L+ NGA + + G TPLHL GH+++ ++LL+ A
Sbjct: 13 DLGKKLLEAARAGQDDEVRILMANGADVNAEDDSGKTPLHLAAIKGHLEIVEVLLKHGAD 72
Query: 1082 VDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHL 1141
V+ K G TPLH+A+ Y H ++I LL+ GA NA GFTPLHL
Sbjct: 73 VNAADKMGDTPLHLAALYGH-------------LEIVEVLLKNGADVNATDTYGFTPLHL 119
Query: 1142 SASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNN 1191
+A GH ++ +LL++GADV+ K G T + +AE+L K N
Sbjct: 120 AADAGHLEIVEVLLKYGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 82/147 (55%)
Query: 194 AAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVR 253
AA G + L+ AD NA +G TPLH+A K +++VE+LLKHGA + A ++
Sbjct: 21 AARAGQDDEVRILMANGADVNAEDDSGKTPLHLAAIKGHLEIVEVLLKHGADVNAADKMG 80
Query: 254 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 313
+ LH+A +++VE+LLK+GA + AT LH+A +++VE+LLK+GA +
Sbjct: 81 DTPLHLAALYGHLEIVEVLLKNGADVNATDTYGFTPLHLAADAGHLEIVEVLLKYGADVN 140
Query: 314 ATTEVREPMLHIACKKNRIKVVELLLK 340
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 69/113 (61%)
Query: 1121 LLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDR 1180
L+ GA NAE +G TPLHL+A +GH ++ +LL+HGADV+ A K G TPLHL A
Sbjct: 33 LMANGADVNAEDDSGKTPLHLAAIKGHLEIVEVLLKHGADVNAADKMGDTPLHLAALYGH 92
Query: 1181 VGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNF 1233
+ + E+LLKN A V+ GFTPLH+A G + + +LL A+V F
Sbjct: 93 LEIVEVLLKNGADVNATDTYGFTPLHLAADAGHLEIVEVLLKYGADVNAQDKF 145
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/125 (44%), Positives = 74/125 (59%), Gaps = 2/125 (1%)
Query: 1265 SAQQGHSTIVALLLDRGASPNA-TNKGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTR 1323
+A+ G V +L+ GA NA + G TPLH +A +GH IV +LL GA NA +K
Sbjct: 21 AARAGQDDEVRILMANGADVNAEDDSGKTPLHLAAIKGHLEIVEVLLKHGADVNAADKM- 79
Query: 1324 GFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGASP 1383
G TPLH+A YG + + +LL A+V+ T GFTPLH +A GH IV +LL GA
Sbjct: 80 GDTPLHLAALYGHLEIVEVLLKNGADVNATDTYGFTPLHLAADAGHLEIVEVLLKYGADV 139
Query: 1384 NATNK 1388
NA +K
Sbjct: 140 NAQDK 144
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 87/158 (55%), Gaps = 13/158 (8%)
Query: 997 ASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKG 1056
A+R G D V +L+ +GA V++ T LH+AA +G E+ VLL++GA + + K G
Sbjct: 21 AARAGQDDEVRILMANGADVNAEDDSGKTPLHLAAIKGHLEIVEVLLKHGADVNAADKMG 80
Query: 1057 FTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMD 1116
TPLHL YGH+++ ++LL+ A V+ G TPLH+A+ H ++
Sbjct: 81 DTPLHLAALYGHLEIVEVLLKNGADVNATDTYGFTPLHLAADAGH-------------LE 127
Query: 1117 IATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAML 1154
I LL+YGA NA+ G T +S G+ D++ +L
Sbjct: 128 IVEVLLKYGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 89.7 bits (221), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 82/147 (55%)
Query: 227 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 286
A + + V +L+ +GA + A + + LH+A K +++VE+LLKHGA + A ++
Sbjct: 21 AARAGQDDEVRILMANGADVNAEDDSGKTPLHLAAIKGHLEIVEVLLKHGADVNAADKMG 80
Query: 287 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 346
+ LH+A +++VE+LLK+GA + AT LH+A +++VE+LLK+GA +
Sbjct: 81 DTPLHLAALYGHLEIVEVLLKNGADVNATDTYGFTPLHLAADAGHLEIVEVLLKYGADVN 140
Query: 347 ATTEVREPMLHIACKKNRIKVVELLLK 373
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 89.7 bits (221), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 82/147 (55%)
Query: 260 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 319
A + + V +L+ +GA + A + + LH+A K +++VE+LLKHGA + A ++
Sbjct: 21 AARAGQDDEVRILMANGADVNAEDDSGKTPLHLAAIKGHLEIVEVLLKHGADVNAADKMG 80
Query: 320 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 379
+ LH+A +++VE+LLK+GA + AT LH+A +++VE+LLK+GA +
Sbjct: 81 DTPLHLAALYGHLEIVEVLLKNGADVNATDTYGFTPLHLAADAGHLEIVEVLLKYGADVN 140
Query: 380 ATTEVREPMLHIACKKNRIKVVELLLK 406
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 89.7 bits (221), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 82/147 (55%)
Query: 293 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 352
A + + V +L+ +GA + A + + LH+A K +++VE+LLKHGA + A ++
Sbjct: 21 AARAGQDDEVRILMANGADVNAEDDSGKTPLHLAAIKGHLEIVEVLLKHGADVNAADKMG 80
Query: 353 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 412
+ LH+A +++VE+LLK+GA + AT LH+A +++VE+LLK+GA +
Sbjct: 81 DTPLHLAALYGHLEIVEVLLKNGADVNATDTYGFTPLHLAADAGHLEIVEVLLKYGADVN 140
Query: 413 ATTEVREPMLHIACKKNRIKVVELLLK 439
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 89.7 bits (221), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 82/147 (55%)
Query: 326 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 385
A + + V +L+ +GA + A + + LH+A K +++VE+LLKHGA + A ++
Sbjct: 21 AARAGQDDEVRILMANGADVNAEDDSGKTPLHLAAIKGHLEIVEVLLKHGADVNAADKMG 80
Query: 386 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 445
+ LH+A +++VE+LLK+GA + AT LH+A +++VE+LLK+GA +
Sbjct: 81 DTPLHLAALYGHLEIVEVLLKNGADVNATDTYGFTPLHLAADAGHLEIVEVLLKYGADVN 140
Query: 446 ATTEVREPMLHIACKKNRIKVVELLLK 472
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 89.7 bits (221), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 82/147 (55%)
Query: 359 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 418
A + + V +L+ +GA + A + + LH+A K +++VE+LLKHGA + A ++
Sbjct: 21 AARAGQDDEVRILMANGADVNAEDDSGKTPLHLAAIKGHLEIVEVLLKHGADVNAADKMG 80
Query: 419 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 478
+ LH+A +++VE+LLK+GA + AT LH+A +++VE+LLK+GA +
Sbjct: 81 DTPLHLAALYGHLEIVEVLLKNGADVNATDTYGFTPLHLAADAGHLEIVEVLLKYGADVN 140
Query: 479 ATTEVREPMLHIACKKNRIKVVELLLK 505
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 89.7 bits (221), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 82/147 (55%)
Query: 392 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 451
A + + V +L+ +GA + A + + LH+A K +++VE+LLKHGA + A ++
Sbjct: 21 AARAGQDDEVRILMANGADVNAEDDSGKTPLHLAAIKGHLEIVEVLLKHGADVNAADKMG 80
Query: 452 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 511
+ LH+A +++VE+LLK+GA + AT LH+A +++VE+LLK+GA +
Sbjct: 81 DTPLHLAALYGHLEIVEVLLKNGADVNATDTYGFTPLHLAADAGHLEIVEVLLKYGADVN 140
Query: 512 ATTEVREPMLHIACKKNRIKVVELLLK 538
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 89.7 bits (221), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 82/147 (55%)
Query: 425 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 484
A + + V +L+ +GA + A + + LH+A K +++VE+LLKHGA + A ++
Sbjct: 21 AARAGQDDEVRILMANGADVNAEDDSGKTPLHLAAIKGHLEIVEVLLKHGADVNAADKMG 80
Query: 485 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 544
+ LH+A +++VE+LLK+GA + AT LH+A +++VE+LLK+GA +
Sbjct: 81 DTPLHLAALYGHLEIVEVLLKNGADVNATDTYGFTPLHLAADAGHLEIVEVLLKYGADVN 140
Query: 545 ATTEVREPMLHIACKKNRIKVVELLLK 571
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 89.7 bits (221), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 82/147 (55%)
Query: 458 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 517
A + + V +L+ +GA + A + + LH+A K +++VE+LLKHGA + A ++
Sbjct: 21 AARAGQDDEVRILMANGADVNAEDDSGKTPLHLAAIKGHLEIVEVLLKHGADVNAADKMG 80
Query: 518 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 577
+ LH+A +++VE+LLK+GA + AT LH+A +++VE+LLK+GA +
Sbjct: 81 DTPLHLAALYGHLEIVEVLLKNGADVNATDTYGFTPLHLAADAGHLEIVEVLLKYGADVN 140
Query: 578 ATTEVREPMLHIACKKNRIKVVELLLK 604
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 89.7 bits (221), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 82/147 (55%)
Query: 491 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 550
A + + V +L+ +GA + A + + LH+A K +++VE+LLKHGA + A ++
Sbjct: 21 AARAGQDDEVRILMANGADVNAEDDSGKTPLHLAAIKGHLEIVEVLLKHGADVNAADKMG 80
Query: 551 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 610
+ LH+A +++VE+LLK+GA + AT LH+A +++VE+LLK+GA +
Sbjct: 81 DTPLHLAALYGHLEIVEVLLKNGADVNATDTYGFTPLHLAADAGHLEIVEVLLKYGADVN 140
Query: 611 ATTEVREPMLHIACKKNRIKVVELLLK 637
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 89.7 bits (221), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 82/147 (55%)
Query: 524 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 583
A + + V +L+ +GA + A + + LH+A K +++VE+LLKHGA + A ++
Sbjct: 21 AARAGQDDEVRILMANGADVNAEDDSGKTPLHLAAIKGHLEIVEVLLKHGADVNAADKMG 80
Query: 584 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 643
+ LH+A +++VE+LLK+GA + AT LH+A +++VE+LLK+GA +
Sbjct: 81 DTPLHLAALYGHLEIVEVLLKNGADVNATDTYGFTPLHLAADAGHLEIVEVLLKYGADVN 140
Query: 644 ATTEVREPMLHIACKKNRIKVVELLLK 670
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 89.7 bits (221), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 82/147 (55%)
Query: 557 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 616
A + + V +L+ +GA + A + + LH+A K +++VE+LLKHGA + A ++
Sbjct: 21 AARAGQDDEVRILMANGADVNAEDDSGKTPLHLAAIKGHLEIVEVLLKHGADVNAADKMG 80
Query: 617 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 676
+ LH+A +++VE+LLK+GA + AT LH+A +++VE+LLK+GA +
Sbjct: 81 DTPLHLAALYGHLEIVEVLLKNGADVNATDTYGFTPLHLAADAGHLEIVEVLLKYGADVN 140
Query: 677 ATTEVREPMLHIACKKNRIKVVELLLK 703
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 89.7 bits (221), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 82/147 (55%)
Query: 590 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 649
A + + V +L+ +GA + A + + LH+A K +++VE+LLKHGA + A ++
Sbjct: 21 AARAGQDDEVRILMANGADVNAEDDSGKTPLHLAAIKGHLEIVEVLLKHGADVNAADKMG 80
Query: 650 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 709
+ LH+A +++VE+LLK+GA + AT LH+A +++VE+LLK+GA +
Sbjct: 81 DTPLHLAALYGHLEIVEVLLKNGADVNATDTYGFTPLHLAADAGHLEIVEVLLKYGADVN 140
Query: 710 ATTEVREPMLHIACKKNRIKVVELLLK 736
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 89.7 bits (221), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 82/147 (55%)
Query: 623 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 682
A + + V +L+ +GA + A + + LH+A K +++VE+LLKHGA + A ++
Sbjct: 21 AARAGQDDEVRILMANGADVNAEDDSGKTPLHLAAIKGHLEIVEVLLKHGADVNAADKMG 80
Query: 683 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 742
+ LH+A +++VE+LLK+GA + AT LH+A +++VE+LLK+GA +
Sbjct: 81 DTPLHLAALYGHLEIVEVLLKNGADVNATDTYGFTPLHLAADAGHLEIVEVLLKYGADVN 140
Query: 743 ATTEVREPMLHIACKKNRIKVVELLLK 769
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 89.7 bits (221), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 82/147 (55%)
Query: 656 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 715
A + + V +L+ +GA + A + + LH+A K +++VE+LLKHGA + A ++
Sbjct: 21 AARAGQDDEVRILMANGADVNAEDDSGKTPLHLAAIKGHLEIVEVLLKHGADVNAADKMG 80
Query: 716 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 775
+ LH+A +++VE+LLK+GA + AT LH+A +++VE+LLK+GA +
Sbjct: 81 DTPLHLAALYGHLEIVEVLLKNGADVNATDTYGFTPLHLAADAGHLEIVEVLLKYGADVN 140
Query: 776 ATTEVREPMLHIACKKNRIKVVELLLK 802
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 89.7 bits (221), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 82/147 (55%)
Query: 689 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 748
A + + V +L+ +GA + A + + LH+A K +++VE+LLKHGA + A ++
Sbjct: 21 AARAGQDDEVRILMANGADVNAEDDSGKTPLHLAAIKGHLEIVEVLLKHGADVNAADKMG 80
Query: 749 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 808
+ LH+A +++VE+LLK+GA + AT LH+A +++VE+LLK+GA +
Sbjct: 81 DTPLHLAALYGHLEIVEVLLKNGADVNATDTYGFTPLHLAADAGHLEIVEVLLKYGADVN 140
Query: 809 ATTEVREPMLHIACKKNRIKVVELLLK 835
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 89.7 bits (221), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 82/147 (55%)
Query: 722 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 781
A + + V +L+ +GA + A + + LH+A K +++VE+LLKHGA + A ++
Sbjct: 21 AARAGQDDEVRILMANGADVNAEDDSGKTPLHLAAIKGHLEIVEVLLKHGADVNAADKMG 80
Query: 782 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 841
+ LH+A +++VE+LLK+GA + AT LH+A +++VE+LLK+GA +
Sbjct: 81 DTPLHLAALYGHLEIVEVLLKNGADVNATDTYGFTPLHLAADAGHLEIVEVLLKYGADVN 140
Query: 842 ATTEVREPMLHIACKKNRIKVVELLLK 868
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 89.7 bits (221), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 82/147 (55%)
Query: 755 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 814
A + + V +L+ +GA + A + + LH+A K +++VE+LLKHGA + A ++
Sbjct: 21 AARAGQDDEVRILMANGADVNAEDDSGKTPLHLAAIKGHLEIVEVLLKHGADVNAADKMG 80
Query: 815 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 874
+ LH+A +++VE+LLK+GA + AT LH+A +++VE+LLK+GA +
Sbjct: 81 DTPLHLAALYGHLEIVEVLLKNGADVNATDTYGFTPLHLAADAGHLEIVEVLLKYGADVN 140
Query: 875 ATTEVREPMLHIACKKNRIKVVELLLK 901
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 89.7 bits (221), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 82/147 (55%)
Query: 788 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 847
A + + V +L+ +GA + A + + LH+A K +++VE+LLKHGA + A ++
Sbjct: 21 AARAGQDDEVRILMANGADVNAEDDSGKTPLHLAAIKGHLEIVEVLLKHGADVNAADKMG 80
Query: 848 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 907
+ LH+A +++VE+LLK+GA + AT LH+A +++VE+LLK+GA +
Sbjct: 81 DTPLHLAALYGHLEIVEVLLKNGADVNATDTYGFTPLHLAADAGHLEIVEVLLKYGADVN 140
Query: 908 ATTEVREPMLHIACKKNRIKVVELLLK 934
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 87.8 bits (216), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 78/125 (62%)
Query: 984 NLRVREQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLL 1043
N +TPLH+A+ G+++IV +LL+HGA V++ K T LH+AA G E+ VLL
Sbjct: 41 NAEDDSGKTPLHLAAIKGHLEIVEVLLKHGADVNAADKMGDTPLHLAALYGHLEIVEVLL 100
Query: 1044 ENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQN 1103
+NGA + +T GFTPLHL GH+++ ++LL+ A V+ Q K G T ++ +++
Sbjct: 101 KNGADVNATDTYGFTPLHLAADAGHLEIVEVLLKYGADVNAQDKFGKTAFDISIDNGNED 160
Query: 1104 VALLL 1108
+A +L
Sbjct: 161 LAEIL 165
Score = 87.4 bits (215), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 69/122 (56%), Gaps = 2/122 (1%)
Query: 1256 DQGFTPLHHSAQQGHSTIVALLLDRGASPNATNK-GFTPLHHSAQQGHSTIVALLLDRGA 1314
D G TPLH +A +GH IV +LL GA NA +K G TPLH +A GH IV +LL GA
Sbjct: 45 DSGKTPLHLAAIKGHLEIVEVLLKHGADVNAADKMGDTPLHLAALYGHLEIVEVLLKNGA 104
Query: 1315 SPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVA 1374
NAT+ T GFTPLH+A G + + +LL A+V+ G T S G+ +
Sbjct: 105 DVNATD-TYGFTPLHLAADAGHLEIVEVLLKYGADVNAQDKFGKTAFDISIDNGNEDLAE 163
Query: 1375 LL 1376
+L
Sbjct: 164 IL 165
Score = 86.7 bits (213), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 82/146 (56%)
Query: 821 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 880
A + + V +L+ +GA + A + + LH+A K +++VE+LLKHGA + A ++
Sbjct: 21 AARAGQDDEVRILMANGADVNAEDDSGKTPLHLAAIKGHLEIVEVLLKHGADVNAADKMG 80
Query: 881 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASSH 940
+ LH+A +++VE+LLK+GA + AT LH+A +++VE+LLK+GA +
Sbjct: 81 DTPLHLAALYGHLEIVEVLLKNGADVNATDTYGFTPLHLAADAGHLEIVEVLLKYGADVN 140
Query: 941 VVSCYSNVKVHVSLNKIQDVSSSILR 966
+ +S++ + + IL+
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQ 166
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 83/170 (48%), Gaps = 27/170 (15%)
Query: 1142 SASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKG 1201
+A G D +L+ +GADV+ +G TPLHL A + + + E+LLK+ A V+ K G
Sbjct: 21 AARAGQDDEVRILMANGADVNAEDDSGKTPLHLAAIKGHLEIVEVLLKHGADVNAADKMG 80
Query: 1202 FTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRXXXXXXXXXXXXXXYTNTTD-QGFT 1260
TPLH+A YG + + +LL A+V N TD GFT
Sbjct: 81 DTPLHLAALYGHLEIVEVLLKNGADV-------------------------NATDTYGFT 115
Query: 1261 PLHHSAQQGHSTIVALLLDRGASPNATNK-GFTPLHHSAQQGHSTIVALL 1309
PLH +A GH IV +LL GA NA +K G T S G+ + +L
Sbjct: 116 PLHLAADAGHLEIVEVLLKYGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 81.6 bits (200), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 80/156 (51%), Gaps = 13/156 (8%)
Query: 1065 KYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEY 1124
+ G ++L+ A V+ + +G TPLH+A+ H ++I LL++
Sbjct: 23 RAGQDDEVRILMANGADVNAEDDSGKTPLHLAAIKGH-------------LEIVEVLLKH 69
Query: 1125 GAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVA 1184
GA NA G TPLHL+A GH ++ +LL++GADV+ G TPLHL A + +
Sbjct: 70 GADVNAADKMGDTPLHLAALYGHLEIVEVLLKNGADVNATDTYGFTPLHLAADAGHLEIV 129
Query: 1185 ELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLL 1220
E+LLK A V+ K G T I+ G +A +L
Sbjct: 130 EVLLKYGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 76.6 bits (187), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 65/119 (54%)
Query: 189 TALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEA 248
T LH+AA GH + + LL AD NA G TPLH+A +++VE+LLK+GA + A
Sbjct: 49 TPLHLAAIKGHLEIVEVLLKHGADVNAADKMGDTPLHLAALYGHLEIVEVLLKNGADVNA 108
Query: 249 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 307
T LH+A +++VE+LLK+GA + A + + I+ + E+L K
Sbjct: 109 TDTYGFTPLHLAADAGHLEIVEVLLKYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 84/150 (56%), Gaps = 18/150 (12%)
Query: 40 AAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISSKTKVR 99
AA+ G+ + V +L++ GA+++ + G T LH AA GH ++E+LL+ GA +++ K+
Sbjct: 21 AARAGQDDEVRILMANGADVNAEDDSGKTPLHLAAIKGHLEIVEVLLKHGADVNAADKMG 80
Query: 100 GFYILRSGHEAVIEMLLEQGAPISSKTKVAAVLLENGASLTSTTKKGFTPLHLTGKYGHI 159
+ H A + LE + VLL+NGA + +T GFTPLHL GH+
Sbjct: 81 DTPL----HLAALYGHLE----------IVEVLLKNGADVNATDTYGFTPLHLAADAGHL 126
Query: 160 KVAKLLLQKDAPVDFQ---GKAPVDDVTVD 186
++ ++LL+ A V+ Q GK D+++D
Sbjct: 127 EIVEVLLKYGADVNAQDKFGKTAF-DISID 155
Score = 63.5 bits (153), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 60/99 (60%), Gaps = 5/99 (5%)
Query: 35 TPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISS 94
TPLH+AA G +V +LL GA+++ + G T LH AA GH ++E+LL+ GA +++
Sbjct: 49 TPLHLAAIKGHLEIVEVLLKHGADVNAADKMGDTPLHLAALYGHLEIVEVLLKNGADVNA 108
Query: 95 KTKVRGFYIL----RSGHEAVIEMLLEQGAPISSKTKVA 129
T GF L +GH ++E+LL+ GA ++++ K
Sbjct: 109 -TDTYGFTPLHLAADAGHLEIVEVLLKYGADVNAQDKFG 146
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 53/84 (63%), Gaps = 3/84 (3%)
Query: 35 TPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISS 94
TPLH+AA +G +V +LL GA+++ G T LH AA +GH ++E+LL+ GA +++
Sbjct: 82 TPLHLAALYGHLEIVEVLLKNGADVNATDTYGFTPLHLAADAGHLEIVEVLLKYGADVNA 141
Query: 95 KTKV--RGFYI-LRSGHEAVIEML 115
+ K F I + +G+E + E+L
Sbjct: 142 QDKFGKTAFDISIDNGNEDLAEIL 165
Score = 40.0 bits (92), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 20 INTINPFGSHFQHNITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHE 79
+N + +G TPLH+AA G +V +LL GA+++ + + G TA + +G+E
Sbjct: 106 VNATDTYG------FTPLHLAADAGHLEIVEVLLKYGADVNAQDKFGKTAFDISIDNGNE 159
Query: 80 AVIEML 85
+ E+L
Sbjct: 160 DLAEIL 165
>pdb|4DUI|A Chain A, Darpin D1 Binding To Tubulin Beta Chain (not In Complex)
Length = 169
Score = 100 bits (248), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 13/171 (7%)
Query: 1021 KDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDA 1080
DL L AA+ GQ++ +L+ NGA + +T G TPLHL YGH+++ ++LL+ A
Sbjct: 12 SDLGKKLLEAARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGA 71
Query: 1081 PVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLH 1140
V+ G TPLH+A+ H ++I LL++GA NA G TPLH
Sbjct: 72 DVNAIDIXGSTPLHLAALIGH-------------LEIVEVLLKHGADVNAVDTWGDTPLH 118
Query: 1141 LSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNN 1191
L+A GH ++ +LL+HGADV+ K G T + +AE+L K N
Sbjct: 119 LAAIMGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 78/147 (53%)
Query: 194 AAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVR 253
AA G + L+ AD NA +G TPLH+A +++VE+LLKHGA + A
Sbjct: 21 AARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIXG 80
Query: 254 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 313
LH+A +++VE+LLKHGA + A + LH+A +++VE+LLKHGA +
Sbjct: 81 STPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVN 140
Query: 314 ATTEVREPMLHIACKKNRIKVVELLLK 340
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 87.4 bits (215), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 83/156 (53%), Gaps = 13/156 (8%)
Query: 1065 KYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEY 1124
+ G ++L+ A V+ +G+TPLH+A+ Y H ++I LL++
Sbjct: 23 RAGQDDEVRILMANGADVNATDASGLTPLHLAATYGH-------------LEIVEVLLKH 69
Query: 1125 GAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVA 1184
GA NA + G TPLHL+A GH ++ +LL+HGADV+ G TPLHL A + +
Sbjct: 70 GADVNAIDIXGSTPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIV 129
Query: 1185 ELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLL 1220
E+LLK+ A V+ K G T I+ G +A +L
Sbjct: 130 EVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 77/147 (52%)
Query: 227 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 286
A + + V +L+ +GA + AT LH+A +++VE+LLKHGA + A
Sbjct: 21 AARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIXG 80
Query: 287 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 346
LH+A +++VE+LLKHGA + A + LH+A +++VE+LLKHGA +
Sbjct: 81 STPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVN 140
Query: 347 ATTEVREPMLHIACKKNRIKVVELLLK 373
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 77/147 (52%)
Query: 260 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 319
A + + V +L+ +GA + AT LH+A +++VE+LLKHGA + A
Sbjct: 21 AARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIXG 80
Query: 320 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 379
LH+A +++VE+LLKHGA + A + LH+A +++VE+LLKHGA +
Sbjct: 81 STPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVN 140
Query: 380 ATTEVREPMLHIACKKNRIKVVELLLK 406
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 77/147 (52%)
Query: 293 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 352
A + + V +L+ +GA + AT LH+A +++VE+LLKHGA + A
Sbjct: 21 AARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIXG 80
Query: 353 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 412
LH+A +++VE+LLKHGA + A + LH+A +++VE+LLKHGA +
Sbjct: 81 STPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVN 140
Query: 413 ATTEVREPMLHIACKKNRIKVVELLLK 439
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 77/147 (52%)
Query: 326 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 385
A + + V +L+ +GA + AT LH+A +++VE+LLKHGA + A
Sbjct: 21 AARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIXG 80
Query: 386 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 445
LH+A +++VE+LLKHGA + A + LH+A +++VE+LLKHGA +
Sbjct: 81 STPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVN 140
Query: 446 ATTEVREPMLHIACKKNRIKVVELLLK 472
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 77/147 (52%)
Query: 359 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 418
A + + V +L+ +GA + AT LH+A +++VE+LLKHGA + A
Sbjct: 21 AARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIXG 80
Query: 419 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 478
LH+A +++VE+LLKHGA + A + LH+A +++VE+LLKHGA +
Sbjct: 81 STPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVN 140
Query: 479 ATTEVREPMLHIACKKNRIKVVELLLK 505
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 77/147 (52%)
Query: 392 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 451
A + + V +L+ +GA + AT LH+A +++VE+LLKHGA + A
Sbjct: 21 AARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIXG 80
Query: 452 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 511
LH+A +++VE+LLKHGA + A + LH+A +++VE+LLKHGA +
Sbjct: 81 STPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVN 140
Query: 512 ATTEVREPMLHIACKKNRIKVVELLLK 538
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 77/147 (52%)
Query: 425 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 484
A + + V +L+ +GA + AT LH+A +++VE+LLKHGA + A
Sbjct: 21 AARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIXG 80
Query: 485 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 544
LH+A +++VE+LLKHGA + A + LH+A +++VE+LLKHGA +
Sbjct: 81 STPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVN 140
Query: 545 ATTEVREPMLHIACKKNRIKVVELLLK 571
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 77/147 (52%)
Query: 458 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 517
A + + V +L+ +GA + AT LH+A +++VE+LLKHGA + A
Sbjct: 21 AARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIXG 80
Query: 518 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 577
LH+A +++VE+LLKHGA + A + LH+A +++VE+LLKHGA +
Sbjct: 81 STPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVN 140
Query: 578 ATTEVREPMLHIACKKNRIKVVELLLK 604
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 77/147 (52%)
Query: 491 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 550
A + + V +L+ +GA + AT LH+A +++VE+LLKHGA + A
Sbjct: 21 AARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIXG 80
Query: 551 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 610
LH+A +++VE+LLKHGA + A + LH+A +++VE+LLKHGA +
Sbjct: 81 STPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVN 140
Query: 611 ATTEVREPMLHIACKKNRIKVVELLLK 637
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 77/147 (52%)
Query: 524 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 583
A + + V +L+ +GA + AT LH+A +++VE+LLKHGA + A
Sbjct: 21 AARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIXG 80
Query: 584 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 643
LH+A +++VE+LLKHGA + A + LH+A +++VE+LLKHGA +
Sbjct: 81 STPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVN 140
Query: 644 ATTEVREPMLHIACKKNRIKVVELLLK 670
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 77/147 (52%)
Query: 557 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 616
A + + V +L+ +GA + AT LH+A +++VE+LLKHGA + A
Sbjct: 21 AARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIXG 80
Query: 617 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 676
LH+A +++VE+LLKHGA + A + LH+A +++VE+LLKHGA +
Sbjct: 81 STPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVN 140
Query: 677 ATTEVREPMLHIACKKNRIKVVELLLK 703
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 77/147 (52%)
Query: 590 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 649
A + + V +L+ +GA + AT LH+A +++VE+LLKHGA + A
Sbjct: 21 AARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIXG 80
Query: 650 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 709
LH+A +++VE+LLKHGA + A + LH+A +++VE+LLKHGA +
Sbjct: 81 STPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVN 140
Query: 710 ATTEVREPMLHIACKKNRIKVVELLLK 736
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 77/147 (52%)
Query: 623 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 682
A + + V +L+ +GA + AT LH+A +++VE+LLKHGA + A
Sbjct: 21 AARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIXG 80
Query: 683 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 742
LH+A +++VE+LLKHGA + A + LH+A +++VE+LLKHGA +
Sbjct: 81 STPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVN 140
Query: 743 ATTEVREPMLHIACKKNRIKVVELLLK 769
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 77/147 (52%)
Query: 656 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 715
A + + V +L+ +GA + AT LH+A +++VE+LLKHGA + A
Sbjct: 21 AARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIXG 80
Query: 716 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 775
LH+A +++VE+LLKHGA + A + LH+A +++VE+LLKHGA +
Sbjct: 81 STPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVN 140
Query: 776 ATTEVREPMLHIACKKNRIKVVELLLK 802
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 77/147 (52%)
Query: 689 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 748
A + + V +L+ +GA + AT LH+A +++VE+LLKHGA + A
Sbjct: 21 AARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIXG 80
Query: 749 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 808
LH+A +++VE+LLKHGA + A + LH+A +++VE+LLKHGA +
Sbjct: 81 STPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVN 140
Query: 809 ATTEVREPMLHIACKKNRIKVVELLLK 835
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 77/147 (52%)
Query: 722 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 781
A + + V +L+ +GA + AT LH+A +++VE+LLKHGA + A
Sbjct: 21 AARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIXG 80
Query: 782 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 841
LH+A +++VE+LLKHGA + A + LH+A +++VE+LLKHGA +
Sbjct: 81 STPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVN 140
Query: 842 ATTEVREPMLHIACKKNRIKVVELLLK 868
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 77/147 (52%)
Query: 755 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 814
A + + V +L+ +GA + AT LH+A +++VE+LLKHGA + A
Sbjct: 21 AARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIXG 80
Query: 815 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 874
LH+A +++VE+LLKHGA + A + LH+A +++VE+LLKHGA +
Sbjct: 81 STPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVN 140
Query: 875 ATTEVREPMLHIACKKNRIKVVELLLK 901
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 77/147 (52%)
Query: 788 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 847
A + + V +L+ +GA + AT LH+A +++VE+LLKHGA + A
Sbjct: 21 AARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIXG 80
Query: 848 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 907
LH+A +++VE+LLKHGA + A + LH+A +++VE+LLKHGA +
Sbjct: 81 STPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVN 140
Query: 908 ATTEVREPMLHIACKKNRIKVVELLLK 934
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 70/125 (56%), Gaps = 2/125 (1%)
Query: 1265 SAQQGHSTIVALLLDRGASPNATN-KGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTR 1323
+A+ G V +L+ GA NAT+ G TPLH +A GH IV +LL GA NA +
Sbjct: 21 AARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAID-IX 79
Query: 1324 GFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGASP 1383
G TPLH+A G + + +LL A+V+ G TPLH +A GH IV +LL GA
Sbjct: 80 GSTPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADV 139
Query: 1384 NATNK 1388
NA +K
Sbjct: 140 NAQDK 144
Score = 83.6 bits (205), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 65/113 (57%)
Query: 1121 LLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDR 1180
L+ GA NA +G TPLHL+A+ GH ++ +LL+HGADV+ G TPLHL A
Sbjct: 33 LMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIXGSTPLHLAALIGH 92
Query: 1181 VGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNF 1233
+ + E+LLK+ A V+ G TPLH+A G + + +LL A+V F
Sbjct: 93 LEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVNAQDKF 145
Score = 83.6 bits (205), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 70/130 (53%)
Query: 178 APVDDVTVDYLTALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVE 237
A V+ LT LH+AA GH + + LL AD NA + G TPLH+A +++VE
Sbjct: 38 ADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIXGSTPLHLAALIGHLEIVE 97
Query: 238 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKN 297
+LLKHGA + A + LH+A +++VE+LLKHGA + A + + I+
Sbjct: 98 VLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNG 157
Query: 298 RIKVVELLLK 307
+ E+L K
Sbjct: 158 NEDLAEILQK 167
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 85/158 (53%), Gaps = 13/158 (8%)
Query: 997 ASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKG 1056
A+R G D V +L+ +GA V++T T LH+AA G E+ VLL++GA + + G
Sbjct: 21 AARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIXG 80
Query: 1057 FTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMD 1116
TPLHL GH+++ ++LL+ A V+ G TPLH+A+ H ++
Sbjct: 81 STPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGH-------------LE 127
Query: 1117 IATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAML 1154
I LL++GA NA+ G T +S G+ D++ +L
Sbjct: 128 IVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 77/146 (52%)
Query: 821 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 880
A + + V +L+ +GA + AT LH+A +++VE+LLKHGA + A
Sbjct: 21 AARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIXG 80
Query: 881 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASSH 940
LH+A +++VE+LLKHGA + A + LH+A +++VE+LLKHGA +
Sbjct: 81 STPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVN 140
Query: 941 VVSCYSNVKVHVSLNKIQDVSSSILR 966
+ +S++ + + IL+
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQ 166
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 67/126 (53%), Gaps = 3/126 (2%)
Query: 1253 NTTD-QGFTPLHHSAQQGHSTIVALLLDRGASPNATN-KGFTPLHHSAQQGHSTIVALLL 1310
N TD G TPLH +A GH IV +LL GA NA + G TPLH +A GH IV +LL
Sbjct: 41 NATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIXGSTPLHLAALIGHLEIVEVLL 100
Query: 1311 DRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHS 1370
GA NA + T G TPLH+A G + + +LL A+V+ G T S G+
Sbjct: 101 KHGADVNAVD-TWGDTPLHLAAIMGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNE 159
Query: 1371 TIVALL 1376
+ +L
Sbjct: 160 DLAEIL 165
Score = 76.6 bits (187), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 73/117 (62%)
Query: 992 TPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTS 1051
TPLH+A+ G+++IV +LL+HGA V++ T LH+AA G E+ VLL++GA + +
Sbjct: 49 TPLHLAATYGHLEIVEVLLKHGADVNAIDIXGSTPLHLAALIGHLEIVEVLLKHGADVNA 108
Query: 1052 TTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLL 1108
G TPLHL GH+++ ++LL+ A V+ Q K G T ++ ++++A +L
Sbjct: 109 VDTWGDTPLHLAAIMGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 80/150 (53%), Gaps = 18/150 (12%)
Query: 40 AAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISSKTKVR 99
AA+ G+ + V +L++ GA+++ GLT LH AA GH ++E+LL+ GA +++ +
Sbjct: 21 AARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNA-IDIX 79
Query: 100 GFYILRSGHEAVIEMLLEQGAPISSKTKVAAVLLENGASLTSTTKKGFTPLHLTGKYGHI 159
G L A + ++ VLL++GA + + G TPLHL GH+
Sbjct: 80 GSTPLHL-------------AALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHL 126
Query: 160 KVAKLLLQKDAPVDFQ---GKAPVDDVTVD 186
++ ++LL+ A V+ Q GK D+++D
Sbjct: 127 EIVEVLLKHGADVNAQDKFGKTAF-DISID 155
Score = 57.0 bits (136), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 58/100 (58%), Gaps = 5/100 (5%)
Query: 34 ITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPIS 93
+TPLH+AA +G +V +LL GA+++ G T LH AA GH ++E+LL+ GA ++
Sbjct: 48 LTPLHLAATYGHLEIVEVLLKHGADVNAIDIXGSTPLHLAALIGHLEIVEVLLKHGADVN 107
Query: 94 SKTKVRGFYILR----SGHEAVIEMLLEQGAPISSKTKVA 129
+ G L GH ++E+LL+ GA ++++ K
Sbjct: 108 A-VDTWGDTPLHLAAIMGHLEIVEVLLKHGADVNAQDKFG 146
Score = 39.3 bits (90), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 6/66 (9%)
Query: 20 INTINPFGSHFQHNITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHE 79
+N ++ +G TPLH+AA G +V +LL GA+++ + + G TA + +G+E
Sbjct: 106 VNAVDTWGD------TPLHLAAIMGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNE 159
Query: 80 AVIEML 85
+ E+L
Sbjct: 160 DLAEIL 165
>pdb|4ATZ|D Chain D, Ad5 Knob In Complex With A Designed Ankyrin Repeat Protein
pdb|4ATZ|E Chain E, Ad5 Knob In Complex With A Designed Ankyrin Repeat Protein
pdb|4ATZ|F Chain F, Ad5 Knob In Complex With A Designed Ankyrin Repeat Protein
Length = 154
Score = 99.8 bits (247), Expect = 1e-20, Method: Composition-based stats.
Identities = 59/166 (35%), Positives = 89/166 (53%), Gaps = 13/166 (7%)
Query: 1022 DLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAP 1081
DL L AA+ GQ++ +L+ NGA + G TPLH+ GH+++ ++LL+ A
Sbjct: 1 DLGKKLLEAARAGQDDEVRILMANGADANAYDHYGRTPLHMAAAVGHLEIVEVLLRNGAD 60
Query: 1082 VDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHL 1141
V+ NG TPLH+A+ H ++I LL+YGA NA+ G TPL+L
Sbjct: 61 VNAVDTNGTTPLHLAASLGH-------------LEIVEVLLKYGADVNAKDATGITPLYL 107
Query: 1142 SASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELL 1187
+A GH ++ +LL+HGADV+ K G T + +AE+L
Sbjct: 108 AAYWGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDIGNEDLAEIL 153
Score = 89.7 bits (221), Expect = 1e-17, Method: Composition-based stats.
Identities = 55/160 (34%), Positives = 88/160 (55%), Gaps = 17/160 (10%)
Query: 997 ASRLGNVDIVMLLLQHGAAVDSTTKDLY--TALHIAAKEGQEEVAAVLLENGASLTSTTK 1054
A+R G D V +L+ +GA D+ D Y T LH+AA G E+ VLL NGA + +
Sbjct: 9 AARAGQDDEVRILMANGA--DANAYDHYGRTPLHMAAAVGHLEIVEVLLRNGADVNAVDT 66
Query: 1055 KGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGAS 1114
G TPLHL GH+++ ++LL+ A V+ + G+TPL++A+++ H
Sbjct: 67 NGTTPLHLAASLGHLEIVEVLLKYGADVNAKDATGITPLYLAAYWGH------------- 113
Query: 1115 MDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAML 1154
++I LL++GA NA+ G T +S G+ D++ +L
Sbjct: 114 LEIVEVLLKHGADVNAQDKFGKTAFDISIDIGNEDLAEIL 153
Score = 85.9 bits (211), Expect = 1e-16, Method: Composition-based stats.
Identities = 47/128 (36%), Positives = 69/128 (53%)
Query: 1106 LLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAA 1165
LL + D L+ GA NA G TPLH++A+ GH ++ +LL +GADV+
Sbjct: 6 LLEAARAGQDDEVRILMANGADANAYDHYGRTPLHMAAAVGHLEIVEVLLRNGADVNAVD 65
Query: 1166 KNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSA 1225
NG TPLHL A + + E+LLK A V+ G TPL++A ++G + + +LL A
Sbjct: 66 TNGTTPLHLAASLGHLEIVEVLLKYGADVNAKDATGITPLYLAAYWGHLEIVEVLLKHGA 125
Query: 1226 NVTVPKNF 1233
+V F
Sbjct: 126 DVNAQDKF 133
Score = 84.0 bits (206), Expect = 5e-16, Method: Composition-based stats.
Identities = 53/128 (41%), Positives = 71/128 (55%), Gaps = 2/128 (1%)
Query: 1262 LHHSAQQGHSTIVALLLDRGASPNATNK-GFTPLHHSAQQGHSTIVALLLDRGASPNATN 1320
L +A+ G V +L+ GA NA + G TPLH +A GH IV +LL GA NA +
Sbjct: 6 LLEAARAGQDDEVRILMANGADANAYDHYGRTPLHMAAAVGHLEIVEVLLRNGADVNAVD 65
Query: 1321 KTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRG 1380
T G TPLH+A G + + +LL A+V+ G TPL+ +A GH IV +LL G
Sbjct: 66 -TNGTTPLHLAASLGHLEIVEVLLKYGADVNAKDATGITPLYLAAYWGHLEIVEVLLKHG 124
Query: 1381 ASPNATNK 1388
A NA +K
Sbjct: 125 ADVNAQDK 132
Score = 81.3 bits (199), Expect = 3e-15, Method: Composition-based stats.
Identities = 42/118 (35%), Positives = 76/118 (64%)
Query: 991 QTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLT 1050
+TPLH+A+ +G+++IV +LL++GA V++ + T LH+AA G E+ VLL+ GA +
Sbjct: 36 RTPLHMAAAVGHLEIVEVLLRNGADVNAVDTNGTTPLHLAASLGHLEIVEVLLKYGADVN 95
Query: 1051 STTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLL 1108
+ G TPL+L +GH+++ ++LL+ A V+ Q K G T ++ ++++A +L
Sbjct: 96 AKDATGITPLYLAAYWGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDIGNEDLAEIL 153
Score = 79.7 bits (195), Expect = 1e-14, Method: Composition-based stats.
Identities = 52/157 (33%), Positives = 78/157 (49%), Gaps = 13/157 (8%)
Query: 1064 GKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLE 1123
+ G ++L+ A + G TPLH+A+ H ++I LL
Sbjct: 10 ARAGQDDEVRILMANGADANAYDHYGRTPLHMAAAVGH-------------LEIVEVLLR 56
Query: 1124 YGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGV 1183
GA NA G TPLHL+AS GH ++ +LL++GADV+ G+TPL+L A + +
Sbjct: 57 NGADVNAVDTNGTTPLHLAASLGHLEIVEVLLKYGADVNAKDATGITPLYLAAYWGHLEI 116
Query: 1184 AELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLL 1220
E+LLK+ A V+ K G T I+ G +A +L
Sbjct: 117 VEVLLKHGADVNAQDKFGKTAFDISIDIGNEDLAEIL 153
Score = 79.0 bits (193), Expect = 2e-14, Method: Composition-based stats.
Identities = 46/142 (32%), Positives = 74/142 (52%), Gaps = 8/142 (5%)
Query: 131 VLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKAPVDDVTVDYLTA 190
+L+ NGA + G TPLH+ GH+++ ++LL+ A V+ V + T
Sbjct: 20 ILMANGADANAYDHYGRTPLHMAAAVGHLEIVEVLLRNGADVN--------AVDTNGTTP 71
Query: 191 LHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATT 250
LH+AA GH + + LL AD NA+ G TPL++A +++VE+LLKHGA + A
Sbjct: 72 LHLAASLGHLEIVEVLLKYGADVNAKDATGITPLYLAAYWGHLEIVEVLLKHGADVNAQD 131
Query: 251 EVREPMLHIACKKNRIKVVELL 272
+ + I+ + E+L
Sbjct: 132 KFGKTAFDISIDIGNEDLAEIL 153
Score = 76.6 bits (187), Expect = 9e-14, Method: Composition-based stats.
Identities = 48/120 (40%), Positives = 66/120 (55%), Gaps = 2/120 (1%)
Query: 1258 GFTPLHHSAQQGHSTIVALLLDRGASPNATN-KGFTPLHHSAQQGHSTIVALLLDRGASP 1316
G TPLH +A GH IV +LL GA NA + G TPLH +A GH IV +LL GA
Sbjct: 35 GRTPLHMAAAVGHLEIVEVLLRNGADVNAVDTNGTTPLHLAASLGHLEIVEVLLKYGADV 94
Query: 1317 NATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALL 1376
NA + T G TPL++A ++G + + +LL A+V+ G T S G+ + +L
Sbjct: 95 NAKDAT-GITPLYLAAYWGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDIGNEDLAEIL 153
Score = 75.9 bits (185), Expect = 1e-13, Method: Composition-based stats.
Identities = 46/145 (31%), Positives = 75/145 (51%)
Query: 194 AAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVR 253
AA G + L+ AD NA G TPLH+A +++VE+LL++GA + A
Sbjct: 9 AARAGQDDEVRILMANGADANAYDHYGRTPLHMAAAVGHLEIVEVLLRNGADVNAVDTNG 68
Query: 254 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 313
LH+A +++VE+LLK+GA + A L++A +++VE+LLKHGA +
Sbjct: 69 TTPLHLAASLGHLEIVEVLLKYGADVNAKDATGITPLYLAAYWGHLEIVEVLLKHGADVN 128
Query: 314 ATTEVREPMLHIACKKNRIKVVELL 338
A + + I+ + E+L
Sbjct: 129 AQDKFGKTAFDISIDIGNEDLAEIL 153
Score = 74.3 bits (181), Expect = 4e-13, Method: Composition-based stats.
Identities = 42/117 (35%), Positives = 64/117 (54%)
Query: 189 TALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEA 248
T LH+AA GH + + LL AD NA NG TPLH+A +++VE+LLK+GA + A
Sbjct: 37 TPLHMAAAVGHLEIVEVLLRNGADVNAVDTNGTTPLHLAASLGHLEIVEVLLKYGADVNA 96
Query: 249 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 305
L++A +++VE+LLKHGA + A + + I+ + E+L
Sbjct: 97 KDATGITPLYLAAYWGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDIGNEDLAEIL 153
Score = 66.6 bits (161), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/136 (29%), Positives = 70/136 (51%)
Query: 236 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 295
V +L+ +GA A LH+A +++VE+LL++GA + A LH+A
Sbjct: 18 VRILMANGADANAYDHYGRTPLHMAAAVGHLEIVEVLLRNGADVNAVDTNGTTPLHLAAS 77
Query: 296 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 355
+++VE+LLK+GA + A L++A +++VE+LLKHGA + A + +
Sbjct: 78 LGHLEIVEVLLKYGADVNAKDATGITPLYLAAYWGHLEIVEVLLKHGADVNAQDKFGKTA 137
Query: 356 LHIACKKNRIKVVELL 371
I+ + E+L
Sbjct: 138 FDISIDIGNEDLAEIL 153
Score = 66.6 bits (161), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/136 (29%), Positives = 70/136 (51%)
Query: 269 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 328
V +L+ +GA A LH+A +++VE+LL++GA + A LH+A
Sbjct: 18 VRILMANGADANAYDHYGRTPLHMAAAVGHLEIVEVLLRNGADVNAVDTNGTTPLHLAAS 77
Query: 329 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 388
+++VE+LLK+GA + A L++A +++VE+LLKHGA + A + +
Sbjct: 78 LGHLEIVEVLLKYGADVNAKDATGITPLYLAAYWGHLEIVEVLLKHGADVNAQDKFGKTA 137
Query: 389 LHIACKKNRIKVVELL 404
I+ + E+L
Sbjct: 138 FDISIDIGNEDLAEIL 153
Score = 66.6 bits (161), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/136 (29%), Positives = 70/136 (51%)
Query: 302 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 361
V +L+ +GA A LH+A +++VE+LL++GA + A LH+A
Sbjct: 18 VRILMANGADANAYDHYGRTPLHMAAAVGHLEIVEVLLRNGADVNAVDTNGTTPLHLAAS 77
Query: 362 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 421
+++VE+LLK+GA + A L++A +++VE+LLKHGA + A + +
Sbjct: 78 LGHLEIVEVLLKYGADVNAKDATGITPLYLAAYWGHLEIVEVLLKHGADVNAQDKFGKTA 137
Query: 422 LHIACKKNRIKVVELL 437
I+ + E+L
Sbjct: 138 FDISIDIGNEDLAEIL 153
Score = 66.6 bits (161), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/136 (29%), Positives = 70/136 (51%)
Query: 335 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 394
V +L+ +GA A LH+A +++VE+LL++GA + A LH+A
Sbjct: 18 VRILMANGADANAYDHYGRTPLHMAAAVGHLEIVEVLLRNGADVNAVDTNGTTPLHLAAS 77
Query: 395 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 454
+++VE+LLK+GA + A L++A +++VE+LLKHGA + A + +
Sbjct: 78 LGHLEIVEVLLKYGADVNAKDATGITPLYLAAYWGHLEIVEVLLKHGADVNAQDKFGKTA 137
Query: 455 LHIACKKNRIKVVELL 470
I+ + E+L
Sbjct: 138 FDISIDIGNEDLAEIL 153
Score = 66.6 bits (161), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/136 (29%), Positives = 70/136 (51%)
Query: 368 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 427
V +L+ +GA A LH+A +++VE+LL++GA + A LH+A
Sbjct: 18 VRILMANGADANAYDHYGRTPLHMAAAVGHLEIVEVLLRNGADVNAVDTNGTTPLHLAAS 77
Query: 428 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 487
+++VE+LLK+GA + A L++A +++VE+LLKHGA + A + +
Sbjct: 78 LGHLEIVEVLLKYGADVNAKDATGITPLYLAAYWGHLEIVEVLLKHGADVNAQDKFGKTA 137
Query: 488 LHIACKKNRIKVVELL 503
I+ + E+L
Sbjct: 138 FDISIDIGNEDLAEIL 153
Score = 66.6 bits (161), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/136 (29%), Positives = 70/136 (51%)
Query: 401 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 460
V +L+ +GA A LH+A +++VE+LL++GA + A LH+A
Sbjct: 18 VRILMANGADANAYDHYGRTPLHMAAAVGHLEIVEVLLRNGADVNAVDTNGTTPLHLAAS 77
Query: 461 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 520
+++VE+LLK+GA + A L++A +++VE+LLKHGA + A + +
Sbjct: 78 LGHLEIVEVLLKYGADVNAKDATGITPLYLAAYWGHLEIVEVLLKHGADVNAQDKFGKTA 137
Query: 521 LHIACKKNRIKVVELL 536
I+ + E+L
Sbjct: 138 FDISIDIGNEDLAEIL 153
Score = 66.6 bits (161), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/136 (29%), Positives = 70/136 (51%)
Query: 434 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 493
V +L+ +GA A LH+A +++VE+LL++GA + A LH+A
Sbjct: 18 VRILMANGADANAYDHYGRTPLHMAAAVGHLEIVEVLLRNGADVNAVDTNGTTPLHLAAS 77
Query: 494 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 553
+++VE+LLK+GA + A L++A +++VE+LLKHGA + A + +
Sbjct: 78 LGHLEIVEVLLKYGADVNAKDATGITPLYLAAYWGHLEIVEVLLKHGADVNAQDKFGKTA 137
Query: 554 LHIACKKNRIKVVELL 569
I+ + E+L
Sbjct: 138 FDISIDIGNEDLAEIL 153
Score = 66.6 bits (161), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/136 (29%), Positives = 70/136 (51%)
Query: 467 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 526
V +L+ +GA A LH+A +++VE+LL++GA + A LH+A
Sbjct: 18 VRILMANGADANAYDHYGRTPLHMAAAVGHLEIVEVLLRNGADVNAVDTNGTTPLHLAAS 77
Query: 527 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 586
+++VE+LLK+GA + A L++A +++VE+LLKHGA + A + +
Sbjct: 78 LGHLEIVEVLLKYGADVNAKDATGITPLYLAAYWGHLEIVEVLLKHGADVNAQDKFGKTA 137
Query: 587 LHIACKKNRIKVVELL 602
I+ + E+L
Sbjct: 138 FDISIDIGNEDLAEIL 153
Score = 66.6 bits (161), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/136 (29%), Positives = 70/136 (51%)
Query: 500 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 559
V +L+ +GA A LH+A +++VE+LL++GA + A LH+A
Sbjct: 18 VRILMANGADANAYDHYGRTPLHMAAAVGHLEIVEVLLRNGADVNAVDTNGTTPLHLAAS 77
Query: 560 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 619
+++VE+LLK+GA + A L++A +++VE+LLKHGA + A + +
Sbjct: 78 LGHLEIVEVLLKYGADVNAKDATGITPLYLAAYWGHLEIVEVLLKHGADVNAQDKFGKTA 137
Query: 620 LHIACKKNRIKVVELL 635
I+ + E+L
Sbjct: 138 FDISIDIGNEDLAEIL 153
Score = 66.6 bits (161), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/136 (29%), Positives = 70/136 (51%)
Query: 533 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 592
V +L+ +GA A LH+A +++VE+LL++GA + A LH+A
Sbjct: 18 VRILMANGADANAYDHYGRTPLHMAAAVGHLEIVEVLLRNGADVNAVDTNGTTPLHLAAS 77
Query: 593 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 652
+++VE+LLK+GA + A L++A +++VE+LLKHGA + A + +
Sbjct: 78 LGHLEIVEVLLKYGADVNAKDATGITPLYLAAYWGHLEIVEVLLKHGADVNAQDKFGKTA 137
Query: 653 LHIACKKNRIKVVELL 668
I+ + E+L
Sbjct: 138 FDISIDIGNEDLAEIL 153
Score = 66.6 bits (161), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/136 (29%), Positives = 70/136 (51%)
Query: 566 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 625
V +L+ +GA A LH+A +++VE+LL++GA + A LH+A
Sbjct: 18 VRILMANGADANAYDHYGRTPLHMAAAVGHLEIVEVLLRNGADVNAVDTNGTTPLHLAAS 77
Query: 626 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 685
+++VE+LLK+GA + A L++A +++VE+LLKHGA + A + +
Sbjct: 78 LGHLEIVEVLLKYGADVNAKDATGITPLYLAAYWGHLEIVEVLLKHGADVNAQDKFGKTA 137
Query: 686 LHIACKKNRIKVVELL 701
I+ + E+L
Sbjct: 138 FDISIDIGNEDLAEIL 153
Score = 66.6 bits (161), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/136 (29%), Positives = 70/136 (51%)
Query: 599 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 658
V +L+ +GA A LH+A +++VE+LL++GA + A LH+A
Sbjct: 18 VRILMANGADANAYDHYGRTPLHMAAAVGHLEIVEVLLRNGADVNAVDTNGTTPLHLAAS 77
Query: 659 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 718
+++VE+LLK+GA + A L++A +++VE+LLKHGA + A + +
Sbjct: 78 LGHLEIVEVLLKYGADVNAKDATGITPLYLAAYWGHLEIVEVLLKHGADVNAQDKFGKTA 137
Query: 719 LHIACKKNRIKVVELL 734
I+ + E+L
Sbjct: 138 FDISIDIGNEDLAEIL 153
Score = 66.6 bits (161), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/136 (29%), Positives = 70/136 (51%)
Query: 632 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 691
V +L+ +GA A LH+A +++VE+LL++GA + A LH+A
Sbjct: 18 VRILMANGADANAYDHYGRTPLHMAAAVGHLEIVEVLLRNGADVNAVDTNGTTPLHLAAS 77
Query: 692 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 751
+++VE+LLK+GA + A L++A +++VE+LLKHGA + A + +
Sbjct: 78 LGHLEIVEVLLKYGADVNAKDATGITPLYLAAYWGHLEIVEVLLKHGADVNAQDKFGKTA 137
Query: 752 LHIACKKNRIKVVELL 767
I+ + E+L
Sbjct: 138 FDISIDIGNEDLAEIL 153
Score = 66.6 bits (161), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/136 (29%), Positives = 70/136 (51%)
Query: 665 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 724
V +L+ +GA A LH+A +++VE+LL++GA + A LH+A
Sbjct: 18 VRILMANGADANAYDHYGRTPLHMAAAVGHLEIVEVLLRNGADVNAVDTNGTTPLHLAAS 77
Query: 725 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 784
+++VE+LLK+GA + A L++A +++VE+LLKHGA + A + +
Sbjct: 78 LGHLEIVEVLLKYGADVNAKDATGITPLYLAAYWGHLEIVEVLLKHGADVNAQDKFGKTA 137
Query: 785 LHIACKKNRIKVVELL 800
I+ + E+L
Sbjct: 138 FDISIDIGNEDLAEIL 153
Score = 66.6 bits (161), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/136 (29%), Positives = 70/136 (51%)
Query: 698 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 757
V +L+ +GA A LH+A +++VE+LL++GA + A LH+A
Sbjct: 18 VRILMANGADANAYDHYGRTPLHMAAAVGHLEIVEVLLRNGADVNAVDTNGTTPLHLAAS 77
Query: 758 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 817
+++VE+LLK+GA + A L++A +++VE+LLKHGA + A + +
Sbjct: 78 LGHLEIVEVLLKYGADVNAKDATGITPLYLAAYWGHLEIVEVLLKHGADVNAQDKFGKTA 137
Query: 818 LHIACKKNRIKVVELL 833
I+ + E+L
Sbjct: 138 FDISIDIGNEDLAEIL 153
Score = 66.6 bits (161), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/136 (29%), Positives = 70/136 (51%)
Query: 731 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 790
V +L+ +GA A LH+A +++VE+LL++GA + A LH+A
Sbjct: 18 VRILMANGADANAYDHYGRTPLHMAAAVGHLEIVEVLLRNGADVNAVDTNGTTPLHLAAS 77
Query: 791 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 850
+++VE+LLK+GA + A L++A +++VE+LLKHGA + A + +
Sbjct: 78 LGHLEIVEVLLKYGADVNAKDATGITPLYLAAYWGHLEIVEVLLKHGADVNAQDKFGKTA 137
Query: 851 LHIACKKNRIKVVELL 866
I+ + E+L
Sbjct: 138 FDISIDIGNEDLAEIL 153
Score = 66.6 bits (161), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/136 (29%), Positives = 70/136 (51%)
Query: 764 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 823
V +L+ +GA A LH+A +++VE+LL++GA + A LH+A
Sbjct: 18 VRILMANGADANAYDHYGRTPLHMAAAVGHLEIVEVLLRNGADVNAVDTNGTTPLHLAAS 77
Query: 824 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 883
+++VE+LLK+GA + A L++A +++VE+LLKHGA + A + +
Sbjct: 78 LGHLEIVEVLLKYGADVNAKDATGITPLYLAAYWGHLEIVEVLLKHGADVNAQDKFGKTA 137
Query: 884 LHIACKKNRIKVVELL 899
I+ + E+L
Sbjct: 138 FDISIDIGNEDLAEIL 153
Score = 66.6 bits (161), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/136 (29%), Positives = 70/136 (51%)
Query: 797 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 856
V +L+ +GA A LH+A +++VE+LL++GA + A LH+A
Sbjct: 18 VRILMANGADANAYDHYGRTPLHMAAAVGHLEIVEVLLRNGADVNAVDTNGTTPLHLAAS 77
Query: 857 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 916
+++VE+LLK+GA + A L++A +++VE+LLKHGA + A + +
Sbjct: 78 LGHLEIVEVLLKYGADVNAKDATGITPLYLAAYWGHLEIVEVLLKHGADVNAQDKFGKTA 137
Query: 917 LHIACKKNRIKVVELL 932
I+ + E+L
Sbjct: 138 FDISIDIGNEDLAEIL 153
Score = 64.7 bits (156), Expect = 4e-10, Method: Composition-based stats.
Identities = 37/126 (29%), Positives = 66/126 (52%)
Query: 830 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 889
V +L+ +GA A LH+A +++VE+LL++GA + A LH+A
Sbjct: 18 VRILMANGADANAYDHYGRTPLHMAAAVGHLEIVEVLLRNGADVNAVDTNGTTPLHLAAS 77
Query: 890 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASSHVVSCYSNVK 949
+++VE+LLK+GA + A L++A +++VE+LLKHGA + +
Sbjct: 78 LGHLEIVEVLLKYGADVNAKDATGITPLYLAAYWGHLEIVEVLLKHGADVNAQDKFGKTA 137
Query: 950 VHVSLN 955
+S++
Sbjct: 138 FDISID 143
Score = 63.9 bits (154), Expect = 5e-10, Method: Composition-based stats.
Identities = 36/96 (37%), Positives = 60/96 (62%), Gaps = 3/96 (3%)
Query: 35 TPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISS 94
TPLH+AA G +V +LL GA+++ +G T LH AA GH ++E+LL+ GA +++
Sbjct: 37 TPLHMAAAVGHLEIVEVLLRNGADVNAVDTNGTTPLHLAASLGHLEIVEVLLKYGADVNA 96
Query: 95 K--TKVRGFYILRS-GHEAVIEMLLEQGAPISSKTK 127
K T + Y+ GH ++E+LL+ GA ++++ K
Sbjct: 97 KDATGITPLYLAAYWGHLEIVEVLLKHGADVNAQDK 132
Score = 63.2 bits (152), Expect = 1e-09, Method: Composition-based stats.
Identities = 44/152 (28%), Positives = 79/152 (51%), Gaps = 22/152 (14%)
Query: 40 AAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISS--KTK 97
AA+ G+ + V +L++ GA+ + G T LH AA GH ++E+LL GA +++
Sbjct: 9 AARAGQDDEVRILMANGADANAYDHYGRTPLHMAAAVGHLEIVEVLLRNGADVNAVDTNG 68
Query: 98 VRGFYILRS-GHEAVIEMLLEQGAPISSKTKVAAVLLENGASLTSTTKKGFTPLHLTGKY 156
++ S GH ++E+LL+ GA +++K G TPL+L +
Sbjct: 69 TTPLHLAASLGHLEIVEVLLKYGADVNAKDAT-----------------GITPLYLAAYW 111
Query: 157 GHIKVAKLLLQKDAPVDFQGK--APVDDVTVD 186
GH+++ ++LL+ A V+ Q K D+++D
Sbjct: 112 GHLEIVEVLLKHGADVNAQDKFGKTAFDISID 143
Score = 40.8 bits (94), Expect = 0.005, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 33/52 (63%)
Query: 34 ITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEML 85
ITPL++AA WG +V +LL GA+++ + + G TA + G+E + E+L
Sbjct: 102 ITPLYLAAYWGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDIGNEDLAEIL 153
>pdb|4DRX|E Chain E, Gtp-Tubulin In Complex With A Darpin
pdb|4DRX|F Chain F, Gtp-Tubulin In Complex With A Darpin
Length = 169
Score = 99.8 bits (247), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 13/171 (7%)
Query: 1021 KDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDA 1080
DL L AA+ GQ++ +L+ NGA + +T G TPLHL YGH+++ ++LL+ A
Sbjct: 12 SDLGKKLLEAARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGA 71
Query: 1081 PVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLH 1140
V+ G TPLH+A+ H ++I LL++GA NA G TPLH
Sbjct: 72 DVNAIDIMGSTPLHLAALIGH-------------LEIVEVLLKHGADVNAVDTWGDTPLH 118
Query: 1141 LSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNN 1191
L+A GH ++ +LL+HGADV+ K G T + +AE+L K N
Sbjct: 119 LAAIMGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 79/147 (53%)
Query: 194 AAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVR 253
AA G + L+ AD NA +G TPLH+A +++VE+LLKHGA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIMG 80
Query: 254 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 313
LH+A +++VE+LLKHGA + A + LH+A +++VE+LLKHGA +
Sbjct: 81 STPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVN 140
Query: 314 ATTEVREPMLHIACKKNRIKVVELLLK 340
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 87.4 bits (215), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 83/156 (53%), Gaps = 13/156 (8%)
Query: 1065 KYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEY 1124
+ G ++L+ A V+ +G+TPLH+A+ Y H ++I LL++
Sbjct: 23 RAGQDDEVRILMANGADVNATDASGLTPLHLAATYGH-------------LEIVEVLLKH 69
Query: 1125 GAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVA 1184
GA NA + G TPLHL+A GH ++ +LL+HGADV+ G TPLHL A + +
Sbjct: 70 GADVNAIDIMGSTPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIV 129
Query: 1185 ELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLL 1220
E+LLK+ A V+ K G T I+ G +A +L
Sbjct: 130 EVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 78/147 (53%)
Query: 227 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 286
A + + V +L+ +GA + AT LH+A +++VE+LLKHGA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIMG 80
Query: 287 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 346
LH+A +++VE+LLKHGA + A + LH+A +++VE+LLKHGA +
Sbjct: 81 STPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVN 140
Query: 347 ATTEVREPMLHIACKKNRIKVVELLLK 373
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 78/147 (53%)
Query: 260 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 319
A + + V +L+ +GA + AT LH+A +++VE+LLKHGA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIMG 80
Query: 320 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 379
LH+A +++VE+LLKHGA + A + LH+A +++VE+LLKHGA +
Sbjct: 81 STPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVN 140
Query: 380 ATTEVREPMLHIACKKNRIKVVELLLK 406
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 78/147 (53%)
Query: 293 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 352
A + + V +L+ +GA + AT LH+A +++VE+LLKHGA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIMG 80
Query: 353 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 412
LH+A +++VE+LLKHGA + A + LH+A +++VE+LLKHGA +
Sbjct: 81 STPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVN 140
Query: 413 ATTEVREPMLHIACKKNRIKVVELLLK 439
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 78/147 (53%)
Query: 326 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 385
A + + V +L+ +GA + AT LH+A +++VE+LLKHGA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIMG 80
Query: 386 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 445
LH+A +++VE+LLKHGA + A + LH+A +++VE+LLKHGA +
Sbjct: 81 STPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVN 140
Query: 446 ATTEVREPMLHIACKKNRIKVVELLLK 472
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 78/147 (53%)
Query: 359 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 418
A + + V +L+ +GA + AT LH+A +++VE+LLKHGA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIMG 80
Query: 419 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 478
LH+A +++VE+LLKHGA + A + LH+A +++VE+LLKHGA +
Sbjct: 81 STPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVN 140
Query: 479 ATTEVREPMLHIACKKNRIKVVELLLK 505
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 78/147 (53%)
Query: 392 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 451
A + + V +L+ +GA + AT LH+A +++VE+LLKHGA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIMG 80
Query: 452 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 511
LH+A +++VE+LLKHGA + A + LH+A +++VE+LLKHGA +
Sbjct: 81 STPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVN 140
Query: 512 ATTEVREPMLHIACKKNRIKVVELLLK 538
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 78/147 (53%)
Query: 425 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 484
A + + V +L+ +GA + AT LH+A +++VE+LLKHGA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIMG 80
Query: 485 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 544
LH+A +++VE+LLKHGA + A + LH+A +++VE+LLKHGA +
Sbjct: 81 STPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVN 140
Query: 545 ATTEVREPMLHIACKKNRIKVVELLLK 571
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 78/147 (53%)
Query: 458 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 517
A + + V +L+ +GA + AT LH+A +++VE+LLKHGA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIMG 80
Query: 518 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 577
LH+A +++VE+LLKHGA + A + LH+A +++VE+LLKHGA +
Sbjct: 81 STPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVN 140
Query: 578 ATTEVREPMLHIACKKNRIKVVELLLK 604
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 78/147 (53%)
Query: 491 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 550
A + + V +L+ +GA + AT LH+A +++VE+LLKHGA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIMG 80
Query: 551 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 610
LH+A +++VE+LLKHGA + A + LH+A +++VE+LLKHGA +
Sbjct: 81 STPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVN 140
Query: 611 ATTEVREPMLHIACKKNRIKVVELLLK 637
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 78/147 (53%)
Query: 524 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 583
A + + V +L+ +GA + AT LH+A +++VE+LLKHGA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIMG 80
Query: 584 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 643
LH+A +++VE+LLKHGA + A + LH+A +++VE+LLKHGA +
Sbjct: 81 STPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVN 140
Query: 644 ATTEVREPMLHIACKKNRIKVVELLLK 670
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 78/147 (53%)
Query: 557 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 616
A + + V +L+ +GA + AT LH+A +++VE+LLKHGA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIMG 80
Query: 617 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 676
LH+A +++VE+LLKHGA + A + LH+A +++VE+LLKHGA +
Sbjct: 81 STPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVN 140
Query: 677 ATTEVREPMLHIACKKNRIKVVELLLK 703
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 78/147 (53%)
Query: 590 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 649
A + + V +L+ +GA + AT LH+A +++VE+LLKHGA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIMG 80
Query: 650 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 709
LH+A +++VE+LLKHGA + A + LH+A +++VE+LLKHGA +
Sbjct: 81 STPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVN 140
Query: 710 ATTEVREPMLHIACKKNRIKVVELLLK 736
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 78/147 (53%)
Query: 623 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 682
A + + V +L+ +GA + AT LH+A +++VE+LLKHGA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIMG 80
Query: 683 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 742
LH+A +++VE+LLKHGA + A + LH+A +++VE+LLKHGA +
Sbjct: 81 STPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVN 140
Query: 743 ATTEVREPMLHIACKKNRIKVVELLLK 769
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 78/147 (53%)
Query: 656 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 715
A + + V +L+ +GA + AT LH+A +++VE+LLKHGA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIMG 80
Query: 716 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 775
LH+A +++VE+LLKHGA + A + LH+A +++VE+LLKHGA +
Sbjct: 81 STPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVN 140
Query: 776 ATTEVREPMLHIACKKNRIKVVELLLK 802
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 78/147 (53%)
Query: 689 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 748
A + + V +L+ +GA + AT LH+A +++VE+LLKHGA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIMG 80
Query: 749 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 808
LH+A +++VE+LLKHGA + A + LH+A +++VE+LLKHGA +
Sbjct: 81 STPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVN 140
Query: 809 ATTEVREPMLHIACKKNRIKVVELLLK 835
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 78/147 (53%)
Query: 722 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 781
A + + V +L+ +GA + AT LH+A +++VE+LLKHGA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIMG 80
Query: 782 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 841
LH+A +++VE+LLKHGA + A + LH+A +++VE+LLKHGA +
Sbjct: 81 STPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVN 140
Query: 842 ATTEVREPMLHIACKKNRIKVVELLLK 868
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 78/147 (53%)
Query: 755 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 814
A + + V +L+ +GA + AT LH+A +++VE+LLKHGA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIMG 80
Query: 815 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 874
LH+A +++VE+LLKHGA + A + LH+A +++VE+LLKHGA +
Sbjct: 81 STPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVN 140
Query: 875 ATTEVREPMLHIACKKNRIKVVELLLK 901
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 78/147 (53%)
Query: 788 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 847
A + + V +L+ +GA + AT LH+A +++VE+LLKHGA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIMG 80
Query: 848 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 907
LH+A +++VE+LLKHGA + A + LH+A +++VE+LLKHGA +
Sbjct: 81 STPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVN 140
Query: 908 ATTEVREPMLHIACKKNRIKVVELLLK 934
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 70/125 (56%), Gaps = 2/125 (1%)
Query: 1265 SAQQGHSTIVALLLDRGASPNATN-KGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTR 1323
+A+ G V +L+ GA NAT+ G TPLH +A GH IV +LL GA NA +
Sbjct: 21 AARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAID-IM 79
Query: 1324 GFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGASP 1383
G TPLH+A G + + +LL A+V+ G TPLH +A GH IV +LL GA
Sbjct: 80 GSTPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADV 139
Query: 1384 NATNK 1388
NA +K
Sbjct: 140 NAQDK 144
Score = 83.2 bits (204), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 65/113 (57%)
Query: 1121 LLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDR 1180
L+ GA NA +G TPLHL+A+ GH ++ +LL+HGADV+ G TPLHL A
Sbjct: 33 LMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIMGSTPLHLAALIGH 92
Query: 1181 VGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNF 1233
+ + E+LLK+ A V+ G TPLH+A G + + +LL A+V F
Sbjct: 93 LEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVNAQDKF 145
Score = 83.2 bits (204), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 70/130 (53%)
Query: 178 APVDDVTVDYLTALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVE 237
A V+ LT LH+AA GH + + LL AD NA + G TPLH+A +++VE
Sbjct: 38 ADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIMGSTPLHLAALIGHLEIVE 97
Query: 238 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKN 297
+LLKHGA + A + LH+A +++VE+LLKHGA + A + + I+
Sbjct: 98 VLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNG 157
Query: 298 RIKVVELLLK 307
+ E+L K
Sbjct: 158 NEDLAEILQK 167
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 78/146 (53%)
Query: 821 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 880
A + + V +L+ +GA + AT LH+A +++VE+LLKHGA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIMG 80
Query: 881 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASSH 940
LH+A +++VE+LLKHGA + A + LH+A +++VE+LLKHGA +
Sbjct: 81 STPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVN 140
Query: 941 VVSCYSNVKVHVSLNKIQDVSSSILR 966
+ +S++ + + IL+
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQ 166
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 85/158 (53%), Gaps = 13/158 (8%)
Query: 997 ASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKG 1056
A+R G D V +L+ +GA V++T T LH+AA G E+ VLL++GA + + G
Sbjct: 21 AARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIMG 80
Query: 1057 FTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMD 1116
TPLHL GH+++ ++LL+ A V+ G TPLH+A+ H ++
Sbjct: 81 STPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGH-------------LE 127
Query: 1117 IATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAML 1154
I LL++GA NA+ G T +S G+ D++ +L
Sbjct: 128 IVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 67/126 (53%), Gaps = 3/126 (2%)
Query: 1253 NTTD-QGFTPLHHSAQQGHSTIVALLLDRGASPNATN-KGFTPLHHSAQQGHSTIVALLL 1310
N TD G TPLH +A GH IV +LL GA NA + G TPLH +A GH IV +LL
Sbjct: 41 NATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIMGSTPLHLAALIGHLEIVEVLL 100
Query: 1311 DRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHS 1370
GA NA + T G TPLH+A G + + +LL A+V+ G T S G+
Sbjct: 101 KHGADVNAVD-TWGDTPLHLAAIMGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNE 159
Query: 1371 TIVALL 1376
+ +L
Sbjct: 160 DLAEIL 165
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 73/117 (62%)
Query: 992 TPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTS 1051
TPLH+A+ G+++IV +LL+HGA V++ T LH+AA G E+ VLL++GA + +
Sbjct: 49 TPLHLAATYGHLEIVEVLLKHGADVNAIDIMGSTPLHLAALIGHLEIVEVLLKHGADVNA 108
Query: 1052 TTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLL 1108
G TPLHL GH+++ ++LL+ A V+ Q K G T ++ ++++A +L
Sbjct: 109 VDTWGDTPLHLAAIMGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 80/150 (53%), Gaps = 18/150 (12%)
Query: 40 AAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISSKTKVR 99
AA+ G+ + V +L++ GA+++ GLT LH AA GH ++E+LL+ GA +++ +
Sbjct: 21 AARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNA-IDIM 79
Query: 100 GFYILRSGHEAVIEMLLEQGAPISSKTKVAAVLLENGASLTSTTKKGFTPLHLTGKYGHI 159
G L A + ++ VLL++GA + + G TPLHL GH+
Sbjct: 80 GSTPLHL-------------AALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHL 126
Query: 160 KVAKLLLQKDAPVDFQ---GKAPVDDVTVD 186
++ ++LL+ A V+ Q GK D+++D
Sbjct: 127 EIVEVLLKHGADVNAQDKFGKTAF-DISID 155
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 58/101 (57%), Gaps = 5/101 (4%)
Query: 33 NITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPI 92
+TPLH+AA +G +V +LL GA+++ G T LH AA GH ++E+LL+ GA +
Sbjct: 47 GLTPLHLAATYGHLEIVEVLLKHGADVNAIDIMGSTPLHLAALIGHLEIVEVLLKHGADV 106
Query: 93 SSKTKVRGFYILR----SGHEAVIEMLLEQGAPISSKTKVA 129
++ G L GH ++E+LL+ GA ++++ K
Sbjct: 107 NA-VDTWGDTPLHLAAIMGHLEIVEVLLKHGADVNAQDKFG 146
Score = 39.3 bits (90), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 6/66 (9%)
Query: 20 INTINPFGSHFQHNITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHE 79
+N ++ +G TPLH+AA G +V +LL GA+++ + + G TA + +G+E
Sbjct: 106 VNAVDTWGD------TPLHLAAIMGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNE 159
Query: 80 AVIEML 85
+ E+L
Sbjct: 160 DLAEIL 165
>pdb|2DVW|A Chain A, Structure Of The Oncoprotein Gankyrin In Complex With S6
Atpase Of The 26s Proteasome
pdb|2DWZ|A Chain A, Structure Of The Oncoprotein Gankyrin In Complex With S6
Atpase Of The 26s Proteasome
pdb|2DWZ|C Chain C, Structure Of The Oncoprotein Gankyrin In Complex With S6
Atpase Of The 26s Proteasome
Length = 231
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 96/190 (50%), Gaps = 13/190 (6%)
Query: 1019 TTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQK 1078
T +D TALH A G E+ LL+ G + G++PLH+ G ++ K LL K
Sbjct: 36 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLVK 95
Query: 1079 DAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTP 1138
A V+ +NG TPLH A+ + +A++LLE GA+ P+A+ T
Sbjct: 96 GAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGAN-------------PDAKDHYDATA 142
Query: 1139 LHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPT 1198
+H +A++G+ M +LL + A + G TPLHL E+RV A+ L+ A +
Sbjct: 143 MHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIEN 202
Query: 1199 KKGFTPLHIA 1208
K+ TPL +A
Sbjct: 203 KEEKTPLQVA 212
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 88/174 (50%), Gaps = 10/174 (5%)
Query: 140 TSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKAPVDDVTVDYLTALHVAAHCGH 199
T T + T LH GH ++ + LLQ PV+ + A + LH+AA G
Sbjct: 34 TRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAG--------WSPLHIAASAGR 85
Query: 200 ARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHI 259
+ K LL K A NA NG TPLH A KNR ++ +LL+ GA+ +A +H
Sbjct: 86 DEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHR 145
Query: 260 ACKKNRIKVVELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASI 312
A K +K+V +LL + AS TE P LH+AC + R++ + L+ GASI
Sbjct: 146 AAAKGNLKMVHILLFYKASTNIQDTEGNTP-LHLACDEERVEEAKFLVTQGASI 198
Score = 87.4 bits (215), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 84/161 (52%), Gaps = 2/161 (1%)
Query: 186 DYLTALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGAS 245
D TALH A GH + + LL N + G++PLHIA R ++V+ LL GA
Sbjct: 39 DSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLVKGAH 98
Query: 246 IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 305
+ A + LH A KNR ++ +LL+ GA+ +A +H A K +K+V +L
Sbjct: 99 VNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHIL 158
Query: 306 LKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASI 345
L + AS TE P LH+AC + R++ + L+ GASI
Sbjct: 159 LFYKASTNIQDTEGNTP-LHLACDEERVEEAKFLVTQGASI 198
Score = 84.3 bits (207), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 89/178 (50%), Gaps = 7/178 (3%)
Query: 202 VAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIAC 261
+A L + D ++R T LH AC ++VE LL+ G + + LHIA
Sbjct: 27 LADKSLATRTDQDSR-----TALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAA 81
Query: 262 KKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREP 321
R ++V+ LL GA + A + LH A KNR ++ +LL+ GA+ +A
Sbjct: 82 SAGRDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDAT 141
Query: 322 MLHIACKKNRIKVVELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASI 378
+H A K +K+V +LL + AS TE P LH+AC + R++ + L+ GASI
Sbjct: 142 AMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTP-LHLACDEERVEEAKFLVTQGASI 198
Score = 84.3 bits (207), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 94/194 (48%), Gaps = 13/194 (6%)
Query: 1036 EEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHV 1095
+E+ +L + + T T + T LH GH ++ + LLQ PV+ + G +PLH+
Sbjct: 20 DELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHI 79
Query: 1096 ASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLL 1155
A+ + LL KGA + NA + G TPLH +AS+ +++ MLL
Sbjct: 80 AASAGRDEIVKALLVKGAHV-------------NAVNQNGCTPLHYAASKNRHEIAVMLL 126
Query: 1156 EHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQIS 1215
E GA+ T +H A + + + +LL A + +G TPLH+AC ++
Sbjct: 127 EGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVE 186
Query: 1216 MARLLLDQSANVTV 1229
A+ L+ Q A++ +
Sbjct: 187 EAKFLVTQGASIYI 200
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 82/164 (50%), Gaps = 2/164 (1%)
Query: 249 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 308
T + LH AC ++VE LL+ G + + LHIA R ++V+ LL
Sbjct: 36 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLVK 95
Query: 309 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 368
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K+V
Sbjct: 96 GAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMV 155
Query: 369 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASI 411
+LL + AS TE P LH+AC + R++ + L+ GASI
Sbjct: 156 HILLFYKASTNIQDTEGNTP-LHLACDEERVEEAKFLVTQGASI 198
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 82/164 (50%), Gaps = 2/164 (1%)
Query: 282 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 341
T + LH AC ++VE LL+ G + + LHIA R ++V+ LL
Sbjct: 36 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLVK 95
Query: 342 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 401
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K+V
Sbjct: 96 GAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMV 155
Query: 402 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASI 444
+LL + AS TE P LH+AC + R++ + L+ GASI
Sbjct: 156 HILLFYKASTNIQDTEGNTP-LHLACDEERVEEAKFLVTQGASI 198
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 82/164 (50%), Gaps = 2/164 (1%)
Query: 315 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 374
T + LH AC ++VE LL+ G + + LHIA R ++V+ LL
Sbjct: 36 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLVK 95
Query: 375 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 434
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K+V
Sbjct: 96 GAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMV 155
Query: 435 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASI 477
+LL + AS TE P LH+AC + R++ + L+ GASI
Sbjct: 156 HILLFYKASTNIQDTEGNTP-LHLACDEERVEEAKFLVTQGASI 198
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 82/164 (50%), Gaps = 2/164 (1%)
Query: 348 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 407
T + LH AC ++VE LL+ G + + LHIA R ++V+ LL
Sbjct: 36 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLVK 95
Query: 408 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 467
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K+V
Sbjct: 96 GAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMV 155
Query: 468 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASI 510
+LL + AS TE P LH+AC + R++ + L+ GASI
Sbjct: 156 HILLFYKASTNIQDTEGNTP-LHLACDEERVEEAKFLVTQGASI 198
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 82/164 (50%), Gaps = 2/164 (1%)
Query: 381 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 440
T + LH AC ++VE LL+ G + + LHIA R ++V+ LL
Sbjct: 36 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLVK 95
Query: 441 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 500
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K+V
Sbjct: 96 GAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMV 155
Query: 501 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASI 543
+LL + AS TE P LH+AC + R++ + L+ GASI
Sbjct: 156 HILLFYKASTNIQDTEGNTP-LHLACDEERVEEAKFLVTQGASI 198
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 82/164 (50%), Gaps = 2/164 (1%)
Query: 414 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 473
T + LH AC ++VE LL+ G + + LHIA R ++V+ LL
Sbjct: 36 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLVK 95
Query: 474 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 533
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K+V
Sbjct: 96 GAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMV 155
Query: 534 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASI 576
+LL + AS TE P LH+AC + R++ + L+ GASI
Sbjct: 156 HILLFYKASTNIQDTEGNTP-LHLACDEERVEEAKFLVTQGASI 198
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 82/164 (50%), Gaps = 2/164 (1%)
Query: 447 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 506
T + LH AC ++VE LL+ G + + LHIA R ++V+ LL
Sbjct: 36 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLVK 95
Query: 507 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 566
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K+V
Sbjct: 96 GAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMV 155
Query: 567 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASI 609
+LL + AS TE P LH+AC + R++ + L+ GASI
Sbjct: 156 HILLFYKASTNIQDTEGNTP-LHLACDEERVEEAKFLVTQGASI 198
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 82/164 (50%), Gaps = 2/164 (1%)
Query: 480 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 539
T + LH AC ++VE LL+ G + + LHIA R ++V+ LL
Sbjct: 36 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLVK 95
Query: 540 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 599
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K+V
Sbjct: 96 GAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMV 155
Query: 600 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASI 642
+LL + AS TE P LH+AC + R++ + L+ GASI
Sbjct: 156 HILLFYKASTNIQDTEGNTP-LHLACDEERVEEAKFLVTQGASI 198
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 82/164 (50%), Gaps = 2/164 (1%)
Query: 513 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 572
T + LH AC ++VE LL+ G + + LHIA R ++V+ LL
Sbjct: 36 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLVK 95
Query: 573 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 632
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K+V
Sbjct: 96 GAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMV 155
Query: 633 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASI 675
+LL + AS TE P LH+AC + R++ + L+ GASI
Sbjct: 156 HILLFYKASTNIQDTEGNTP-LHLACDEERVEEAKFLVTQGASI 198
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 82/164 (50%), Gaps = 2/164 (1%)
Query: 546 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 605
T + LH AC ++VE LL+ G + + LHIA R ++V+ LL
Sbjct: 36 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLVK 95
Query: 606 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 665
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K+V
Sbjct: 96 GAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMV 155
Query: 666 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASI 708
+LL + AS TE P LH+AC + R++ + L+ GASI
Sbjct: 156 HILLFYKASTNIQDTEGNTP-LHLACDEERVEEAKFLVTQGASI 198
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 82/164 (50%), Gaps = 2/164 (1%)
Query: 579 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 638
T + LH AC ++VE LL+ G + + LHIA R ++V+ LL
Sbjct: 36 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLVK 95
Query: 639 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 698
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K+V
Sbjct: 96 GAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMV 155
Query: 699 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASI 741
+LL + AS TE P LH+AC + R++ + L+ GASI
Sbjct: 156 HILLFYKASTNIQDTEGNTP-LHLACDEERVEEAKFLVTQGASI 198
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 82/164 (50%), Gaps = 2/164 (1%)
Query: 612 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 671
T + LH AC ++VE LL+ G + + LHIA R ++V+ LL
Sbjct: 36 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLVK 95
Query: 672 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 731
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K+V
Sbjct: 96 GAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMV 155
Query: 732 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASI 774
+LL + AS TE P LH+AC + R++ + L+ GASI
Sbjct: 156 HILLFYKASTNIQDTEGNTP-LHLACDEERVEEAKFLVTQGASI 198
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 82/164 (50%), Gaps = 2/164 (1%)
Query: 645 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 704
T + LH AC ++VE LL+ G + + LHIA R ++V+ LL
Sbjct: 36 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLVK 95
Query: 705 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 764
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K+V
Sbjct: 96 GAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMV 155
Query: 765 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASI 807
+LL + AS TE P LH+AC + R++ + L+ GASI
Sbjct: 156 HILLFYKASTNIQDTEGNTP-LHLACDEERVEEAKFLVTQGASI 198
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 82/164 (50%), Gaps = 2/164 (1%)
Query: 678 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 737
T + LH AC ++VE LL+ G + + LHIA R ++V+ LL
Sbjct: 36 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLVK 95
Query: 738 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 797
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K+V
Sbjct: 96 GAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMV 155
Query: 798 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASI 840
+LL + AS TE P LH+AC + R++ + L+ GASI
Sbjct: 156 HILLFYKASTNIQDTEGNTP-LHLACDEERVEEAKFLVTQGASI 198
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 82/164 (50%), Gaps = 2/164 (1%)
Query: 711 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 770
T + LH AC ++VE LL+ G + + LHIA R ++V+ LL
Sbjct: 36 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLVK 95
Query: 771 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 830
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K+V
Sbjct: 96 GAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMV 155
Query: 831 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASI 873
+LL + AS TE P LH+AC + R++ + L+ GASI
Sbjct: 156 HILLFYKASTNIQDTEGNTP-LHLACDEERVEEAKFLVTQGASI 198
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 82/164 (50%), Gaps = 2/164 (1%)
Query: 744 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 803
T + LH AC ++VE LL+ G + + LHIA R ++V+ LL
Sbjct: 36 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLVK 95
Query: 804 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 863
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K+V
Sbjct: 96 GAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMV 155
Query: 864 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASI 906
+LL + AS TE P LH+AC + R++ + L+ GASI
Sbjct: 156 HILLFYKASTNIQDTEGNTP-LHLACDEERVEEAKFLVTQGASI 198
Score = 81.6 bits (200), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 83/166 (50%), Gaps = 2/166 (1%)
Query: 777 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 836
T + LH AC ++VE LL+ G + + LHIA R ++V+ LL
Sbjct: 36 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLVK 95
Query: 837 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 896
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K+V
Sbjct: 96 GAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMV 155
Query: 897 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASSHV 941
+LL + AS TE P LH+AC + R++ + L+ GAS ++
Sbjct: 156 HILLFYKASTNIQDTEGNTP-LHLACDEERVEEAKFLVTQGASIYI 200
Score = 80.1 bits (196), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 94/199 (47%), Gaps = 28/199 (14%)
Query: 1166 KNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSA 1225
++ T LH + E LL+ V+ G++PLHIA G+ + + LL + A
Sbjct: 38 QDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLVKGA 97
Query: 1226 NVTVPKNFPSRXXXXXXXXXXXXXXYTNTTDQ-GFTPLHHSAQQGHSTIVALLLDRGASP 1284
+V N +Q G TPLH++A + I +LL+ GA+P
Sbjct: 98 HV-------------------------NAVNQNGCTPLHYAASKNRHEIAVMLLEGGANP 132
Query: 1285 NATN-KGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLL 1343
+A + T +H +A +G+ +V +LL AS N + T G TPLH+AC ++ A+ L
Sbjct: 133 DAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQD-TEGNTPLHLACDEERVEEAKFL 191
Query: 1344 LDQSANVSCTTDQGFTPLH 1362
+ Q A++ + TPL
Sbjct: 192 VTQGASIYIENKEEKTPLQ 210
Score = 80.1 bits (196), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 85/187 (45%), Gaps = 26/187 (13%)
Query: 1203 TPLHIACHYGQISMARLLLDQSANVTVPKNFPSRXXXXXXXXXXXXXXYTNTTDQGFTPL 1262
T LH AC G + LL + VP N + D G++PL
Sbjct: 42 TALHWACSAGHTEIVEFLL----QLGVPVN--------------------DKDDAGWSPL 77
Query: 1263 HHSAQQGHSTIVALLLDRGASPNATNK-GFTPLHHSAQQGHSTIVALLLDRGASPNATNK 1321
H +A G IV LL +GA NA N+ G TPLH++A + I +LL+ GA+P+A +
Sbjct: 78 HIAASAGRDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDH 137
Query: 1322 TRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGA 1381
T +H A G + M +LL A+ + +G TPLH + + L+ +GA
Sbjct: 138 YDA-TAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGA 196
Query: 1382 SPNATNK 1388
S NK
Sbjct: 197 SIYIENK 203
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 13/204 (6%)
Query: 810 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 869
T + LH AC ++VE LL+ G + + LHIA R ++V+ LL
Sbjct: 36 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLVK 95
Query: 870 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 929
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K+V
Sbjct: 96 GAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMV 155
Query: 930 ELLLKHGASSHVVSCYSNVKVHVSLNKIQDVSSSILRLATCDVLPQCETRLNFSNLRVRE 989
+LL + AS+++ N +H++ ++ + + L + + +E
Sbjct: 156 HILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIY-----------IENKE 204
Query: 990 QQTPLHIASRLGNVDIVMLLLQHG 1013
++TPL +A G + +++ L G
Sbjct: 205 EKTPLQVAK--GGLGLILKRLAEG 226
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 69/126 (54%)
Query: 992 TPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTS 1051
+PLHIA+ G +IV LL GA V++ ++ T LH AA + + E+A +LLE GA+ +
Sbjct: 75 SPLHIAASAGRDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDA 134
Query: 1052 TTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEK 1111
T +H G++K+ +LL A + Q G TPLH+A + A L+ +
Sbjct: 135 KDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQ 194
Query: 1112 GASMDI 1117
GAS+ I
Sbjct: 195 GASIYI 200
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 87/196 (44%), Gaps = 26/196 (13%)
Query: 1137 TPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDT 1196
T LH + S GH ++ LL+ G V+ G +PLH+ A R + + LL A V+
Sbjct: 42 TALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLVKGAHVNA 101
Query: 1197 PTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRXXXXXXXXXXXXXXYTNTTD 1256
+ G TPLH A + +A +LL+ AN ++ +
Sbjct: 102 VNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDA--------------------- 140
Query: 1257 QGFTPLHHSAQQGHSTIVALLLDRGASPNATN-KGFTPLHHSAQQGHSTIVALLLDRGAS 1315
T +H +A +G+ +V +LL AS N + +G TPLH + + L+ +GAS
Sbjct: 141 ---TAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGAS 197
Query: 1316 PNATNKTRGFTPLHIA 1331
NK TPL +A
Sbjct: 198 IYIENKEEK-TPLQVA 212
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 78/175 (44%), Gaps = 26/175 (14%)
Query: 1116 DIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLC 1175
+I LL+ G N + AG++PLH++AS G ++ LL GA V+ +NG TPLH
Sbjct: 54 EIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLVKGAHVNAVNQNGCTPLHYA 113
Query: 1176 AQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPS 1235
A ++R +A +LL+ A D T +H A G + M +LL A+
Sbjct: 114 ASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKAS--------- 164
Query: 1236 RXXXXXXXXXXXXXXYTNTTD-QGFTPLHHSAQQGHSTIVALLLDRGASPNATNK 1289
TN D +G TPLH + + L+ +GAS NK
Sbjct: 165 ----------------TNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENK 203
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 68/153 (44%), Gaps = 14/153 (9%)
Query: 25 PFGSHFQHNITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEM 84
P +PLH+AA G+ +V LL +GA+++ ++G T LH AA + M
Sbjct: 65 PVNDKDDAGWSPLHIAASAGRDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVM 124
Query: 85 LLEQGAPISSKTKVRGFYILRSGHEAVIEMLLEQGAPISSKTKVAAVLLENGASLTSTTK 144
LLE GA +K + R+ + ++M+ +LL AS
Sbjct: 125 LLEGGANPDAKDHYDATAMHRAAAKGNLKMV--------------HILLFYKASTNIQDT 170
Query: 145 KGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGK 177
+G TPLHL ++ AK L+ + A + + K
Sbjct: 171 EGNTPLHLACDEERVEEAKFLVTQGASIYIENK 203
Score = 38.5 bits (88), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Query: 20 INTINPFGSHFQHNITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHE 79
+N +N Q+ TPLH AA + + +LL GAN D K TA+H AA G+
Sbjct: 99 VNAVN------QNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNL 152
Query: 80 AVIEMLL 86
++ +LL
Sbjct: 153 KMVHILL 159
>pdb|1WDY|A Chain A, Crystal Structure Of Ribonuclease
Length = 285
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 121/282 (42%), Gaps = 23/282 (8%)
Query: 1114 SMDIATTLLEYGAKPN-AESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPL 1172
+D+ LLE GA N E G+TPLH + D+ +LL HGAD KNG TP
Sbjct: 17 DVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPF 76
Query: 1173 HLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKN 1232
L A V + +L L A V+ GFT A YG++ + L + ANV + +
Sbjct: 77 LLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRK 136
Query: 1233 FPSRXXXXXXXXXXXXXXYTNTTDQGFTPLHHSAQQGHSTIVALLLDR-GASPNA-TNKG 1290
G T L +A++GH ++ +LLD GA NA N G
Sbjct: 137 TKEDQERLRKG--------------GATALMDAAEKGHVEVLKILLDEMGADVNACDNMG 182
Query: 1291 FTPLHH----SAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQ 1346
L H S I LLLD GA N + RG TPL +A + + + LL+Q
Sbjct: 183 RNALIHALLSSDDSDVEAITHLLLDHGADVNVRGE-RGKTPLILAVEKKHLGLVQRLLEQ 241
Query: 1347 S-ANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATN 1387
++ T G T L + + I LL RGAS + +
Sbjct: 242 EHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGD 283
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 119/262 (45%), Gaps = 30/262 (11%)
Query: 983 SNLRVREQQ---TPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVA 1039
+N+ +E++ TPLH A ++ DIV LLL+HGA K+ T +AA G ++
Sbjct: 29 ANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLL 88
Query: 1040 AVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQ----------GKNG 1089
+ L GA + GFT YG +K K L ++ A V+ + K G
Sbjct: 89 KLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGG 148
Query: 1090 VTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPL-HLSASEGHA 1148
T L A+ H V +LL+ E GA NA G L H S +
Sbjct: 149 ATALMDAAEKGHVEVLKILLD------------EMGADVNACDNMGRNALIHALLSSDDS 196
Query: 1149 DMSA---MLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLL-KNNAQVDTPTKKGFTP 1204
D+ A +LL+HGADV+ + G TPL L ++ +G+ + LL + + +++ G T
Sbjct: 197 DVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTA 256
Query: 1205 LHIACHYGQISMARLLLDQSAN 1226
L +A +A LL + A+
Sbjct: 257 LLLAVELKLKKIAELLCKRGAS 278
Score = 76.6 bits (187), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 123/276 (44%), Gaps = 23/276 (8%)
Query: 47 NMVTLLLSRGANIDNKTRDG-LTALHCAARSGHEAVIEMLLEQGAPISSKTKVRGFYILR 105
++V LL GAN++ + +G T LH A + E ++E+LL GA +LR
Sbjct: 19 DLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGAD----------PVLR 68
Query: 106 SGHEAVIEMLLEQGAPISSKTKVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLL 165
+ A +L A I+ K+ + L GA + GFT YG +K K L
Sbjct: 69 KKNGATPFLL----AAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFL 124
Query: 166 LQKDAPVDFQGKAPVDDVTV--DYLTALHVAAHCGHARVAKTLLDK-KADPNARALNGFT 222
++ A V+ + K D + TAL AA GH V K LLD+ AD NA G
Sbjct: 125 YKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRN 184
Query: 223 PLHIACKKNRIKVVE----LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG-A 277
L A + VE LLL HGA + E + L +A +K + +V+ LL+
Sbjct: 185 ALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHI 244
Query: 278 SIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 313
I T + L +A + K+ ELL K GAS +
Sbjct: 245 EINDTDSDGKTALLLAVELKLKKIAELLCKRGASTD 280
Score = 68.2 bits (165), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 111/243 (45%), Gaps = 18/243 (7%)
Query: 220 GFTPLHIACKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGAS 278
G+TPLH A + +R +VELLL+HGA + P L +A +K+++L L GA
Sbjct: 39 GWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFL-LAAIAGSVKLLKLFLSKGAD 97
Query: 279 IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM----------LHIACK 328
+ A ++K ++ L K GA++ + +E L A +
Sbjct: 98 VNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAE 157
Query: 329 KNRIKVVELLLKH-GASIEATTEV-REPMLHIACKKNRIKV---VELLLKHGASIEATTE 383
K ++V+++LL GA + A + R ++H + V LLL HGA + E
Sbjct: 158 KGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGE 217
Query: 384 VREPMLHIACKKNRIKVVELLLKHG-ASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 442
+ L +A +K + +V+ LL+ I T + L +A + K+ ELL K GA
Sbjct: 218 RGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGA 277
Query: 443 SIE 445
S +
Sbjct: 278 STD 280
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 121/277 (43%), Gaps = 53/277 (19%)
Query: 29 HFQH---NITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEML 85
+FQ TPLH A + + ++V LLL GA+ + ++G T AA +G ++++
Sbjct: 32 NFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLF 91
Query: 86 LEQGAPISSKTKVRGFYILRSGHEAVIEMLLEQGAPISSKTKVAAVLLENGASLT----- 140
L +GA ++ FY G A +E A + K K L + GA++
Sbjct: 92 LSKGADVNECD----FY----GFTAFME------AAVYGKVKALKFLYKRGANVNLRRKT 137
Query: 141 -----STTKKGFTPLHLTGKYGHIKVAKLLLQK-DAPV---DFQGKAPV-------DDVT 184
K G T L + GH++V K+LL + A V D G+ + DD
Sbjct: 138 KEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSD 197
Query: 185 VDYLTALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHG- 243
V+ +T L LLD AD N R G TPL +A +K + +V+ LL+
Sbjct: 198 VEAITHL--------------LLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEH 243
Query: 244 ASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 280
I T + L +A + K+ ELL K GAS +
Sbjct: 244 IEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTD 280
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 60/126 (47%), Gaps = 3/126 (2%)
Query: 1265 SAQQGHSTIVALLLDRGASPNATNK--GFTPLHHSAQQGHSTIVALLLDRGASPNATNKT 1322
+ Q +V LL+ GA+ N + G+TPLH++ Q IV LLL GA P K
Sbjct: 12 AVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADP-VLRKK 70
Query: 1323 RGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGAS 1382
G TP +A G + + +L L + A+V+ GFT +A G + L RGA+
Sbjct: 71 NGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGAN 130
Query: 1383 PNATNK 1388
N K
Sbjct: 131 VNLRRK 136
Score = 63.2 bits (152), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 121/269 (44%), Gaps = 19/269 (7%)
Query: 689 ACKKNRIKVVELLLKHGASIEATTEVREPM-LHIACKKNRIKVVELLLKHGAS-IEATTE 746
A + + +V+ LL+ GA++ E LH A + +R +VELLL+HGA +
Sbjct: 12 AVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKN 71
Query: 747 VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGAS 806
P L +A +K+++L L GA + A ++K ++ L K GA+
Sbjct: 72 GATPFL-LAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGAN 130
Query: 807 IEATTEVREPM----------LHIACKKNRIKVVELLLKH-GASIEATTEV-REPMLHIA 854
+ + +E L A +K ++V+++LL GA + A + R ++H
Sbjct: 131 VNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHAL 190
Query: 855 CKKNRIKV---VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG-ASIEATT 910
+ V LLL HGA + E + L +A +K + +V+ LL+ I T
Sbjct: 191 LSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTD 250
Query: 911 EVREPMLHIACKKNRIKVVELLLKHGASS 939
+ L +A + K+ ELL K GAS+
Sbjct: 251 SDGKTALLLAVELKLKKIAELLCKRGAST 279
Score = 63.2 bits (152), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 121/270 (44%), Gaps = 19/270 (7%)
Query: 227 ACKKNRIKVVELLLKHGASIEATTEVREPM-LHIACKKNRIKVVELLLKHGAS-IEATTE 284
A + + +V+ LL+ GA++ E LH A + +R +VELLL+HGA +
Sbjct: 12 AVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKN 71
Query: 285 VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGAS 344
P L +A +K+++L L GA + A ++K ++ L K GA+
Sbjct: 72 GATPFL-LAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGAN 130
Query: 345 IEATTEVREPM----------LHIACKKNRIKVVELLLKH-GASIEATTEV-REPMLHIA 392
+ + +E L A +K ++V+++LL GA + A + R ++H
Sbjct: 131 VNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHAL 190
Query: 393 CKKNRIKV---VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG-ASIEATT 448
+ V LLL HGA + E + L +A +K + +V+ LL+ I T
Sbjct: 191 LSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTD 250
Query: 449 EVREPMLHIACKKNRIKVVELLLKHGASIE 478
+ L +A + K+ ELL K GAS +
Sbjct: 251 SDGKTALLLAVELKLKKIAELLCKRGASTD 280
Score = 63.2 bits (152), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 121/270 (44%), Gaps = 19/270 (7%)
Query: 425 ACKKNRIKVVELLLKHGASIEATTEVREPM-LHIACKKNRIKVVELLLKHGAS-IEATTE 482
A + + +V+ LL+ GA++ E LH A + +R +VELLL+HGA +
Sbjct: 12 AVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKN 71
Query: 483 VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGAS 542
P L +A +K+++L L GA + A ++K ++ L K GA+
Sbjct: 72 GATPFL-LAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGAN 130
Query: 543 IEATTEVREPM----------LHIACKKNRIKVVELLLKH-GASIEATTEV-REPMLHIA 590
+ + +E L A +K ++V+++LL GA + A + R ++H
Sbjct: 131 VNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHAL 190
Query: 591 CKKNRIKV---VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG-ASIEATT 646
+ V LLL HGA + E + L +A +K + +V+ LL+ I T
Sbjct: 191 LSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTD 250
Query: 647 EVREPMLHIACKKNRIKVVELLLKHGASIE 676
+ L +A + K+ ELL K GAS +
Sbjct: 251 SDGKTALLLAVELKLKKIAELLCKRGASTD 280
Score = 63.2 bits (152), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 121/270 (44%), Gaps = 19/270 (7%)
Query: 458 ACKKNRIKVVELLLKHGASIEATTEVREPM-LHIACKKNRIKVVELLLKHGAS-IEATTE 515
A + + +V+ LL+ GA++ E LH A + +R +VELLL+HGA +
Sbjct: 12 AVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKN 71
Query: 516 VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGAS 575
P L +A +K+++L L GA + A ++K ++ L K GA+
Sbjct: 72 GATPFL-LAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGAN 130
Query: 576 IEATTEVREPM----------LHIACKKNRIKVVELLLKH-GASIEATTEV-REPMLHIA 623
+ + +E L A +K ++V+++LL GA + A + R ++H
Sbjct: 131 VNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHAL 190
Query: 624 CKKNRIKV---VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG-ASIEATT 679
+ V LLL HGA + E + L +A +K + +V+ LL+ I T
Sbjct: 191 LSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTD 250
Query: 680 EVREPMLHIACKKNRIKVVELLLKHGASIE 709
+ L +A + K+ ELL K GAS +
Sbjct: 251 SDGKTALLLAVELKLKKIAELLCKRGASTD 280
Score = 63.2 bits (152), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 121/270 (44%), Gaps = 19/270 (7%)
Query: 656 ACKKNRIKVVELLLKHGASIEATTEVREPM-LHIACKKNRIKVVELLLKHGAS-IEATTE 713
A + + +V+ LL+ GA++ E LH A + +R +VELLL+HGA +
Sbjct: 12 AVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKN 71
Query: 714 VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGAS 773
P L +A +K+++L L GA + A ++K ++ L K GA+
Sbjct: 72 GATPFL-LAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGAN 130
Query: 774 IEATTEVREPM----------LHIACKKNRIKVVELLLKH-GASIEATTEV-REPMLHIA 821
+ + +E L A +K ++V+++LL GA + A + R ++H
Sbjct: 131 VNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHAL 190
Query: 822 CKKNRIKV---VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG-ASIEATT 877
+ V LLL HGA + E + L +A +K + +V+ LL+ I T
Sbjct: 191 LSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTD 250
Query: 878 EVREPMLHIACKKNRIKVVELLLKHGASIE 907
+ L +A + K+ ELL K GAS +
Sbjct: 251 SDGKTALLLAVELKLKKIAELLCKRGASTD 280
>pdb|2V5Q|C Chain C, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|D Chain D, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 167
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 85/155 (54%), Gaps = 13/155 (8%)
Query: 1021 KDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDA 1080
DL L AA+ GQ++ +L+ NGA + + G TPLHL GH+++ ++LL+ A
Sbjct: 12 SDLGKKLLEAARAGQDDEVRILIANGADVNAVDNTGLTPLHLAAVSGHLEIVEVLLKHGA 71
Query: 1081 PVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLH 1140
VD G TPLH+A+ H ++I LL+YGA NA + G TPLH
Sbjct: 72 DVDAADVYGFTPLHLAAMTGH-------------LEIVEVLLKYGADVNAFDMTGSTPLH 118
Query: 1141 LSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLC 1175
L+A EGH ++ +LL++GADV+ K G T +
Sbjct: 119 LAADEGHLEIVEVLLKYGADVNAQDKFGKTAFDIS 153
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 73/138 (52%)
Query: 194 AAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVR 253
AA G + L+ AD NA G TPLH+A +++VE+LLKHGA ++A
Sbjct: 21 AARAGQDDEVRILIANGADVNAVDNTGLTPLHLAAVSGHLEIVEVLLKHGADVDAADVYG 80
Query: 254 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 313
LH+A +++VE+LLK+GA + A LH+A + +++VE+LLK+GA +
Sbjct: 81 FTPLHLAAMTGHLEIVEVLLKYGADVNAFDMTGSTPLHLAADEGHLEIVEVLLKYGADVN 140
Query: 314 ATTEVREPMLHIACKKNR 331
A + + I+
Sbjct: 141 AQDKFGKTAFDISIDNGN 158
Score = 87.8 bits (216), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 71/125 (56%), Gaps = 2/125 (1%)
Query: 1265 SAQQGHSTIVALLLDRGASPNAT-NKGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTR 1323
+A+ G V +L+ GA NA N G TPLH +A GH IV +LL GA +A +
Sbjct: 21 AARAGQDDEVRILIANGADVNAVDNTGLTPLHLAAVSGHLEIVEVLLKHGADVDAAD-VY 79
Query: 1324 GFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGASP 1383
GFTPLH+A G + + +LL A+V+ G TPLH +A +GH IV +LL GA
Sbjct: 80 GFTPLHLAAMTGHLEIVEVLLKYGADVNAFDMTGSTPLHLAADEGHLEIVEVLLKYGADV 139
Query: 1384 NATNK 1388
NA +K
Sbjct: 140 NAQDK 144
Score = 87.4 bits (215), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 83/155 (53%), Gaps = 13/155 (8%)
Query: 997 ASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKG 1056
A+R G D V +L+ +GA V++ T LH+AA G E+ VLL++GA + + G
Sbjct: 21 AARAGQDDEVRILIANGADVNAVDNTGLTPLHLAAVSGHLEIVEVLLKHGADVDAADVYG 80
Query: 1057 FTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMD 1116
FTPLHL GH+++ ++LL+ A V+ G TPLH+A+ H ++
Sbjct: 81 FTPLHLAAMTGHLEIVEVLLKYGADVNAFDMTGSTPLHLAADEGH-------------LE 127
Query: 1117 IATTLLEYGAKPNAESVAGFTPLHLSASEGHADMS 1151
I LL+YGA NA+ G T +S G+ D++
Sbjct: 128 IVEVLLKYGADVNAQDKFGKTAFDISIDNGNEDLA 162
Score = 87.0 bits (214), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 81/154 (52%), Gaps = 13/154 (8%)
Query: 1065 KYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEY 1124
+ G ++L+ A V+ G+TPLH+A+ H ++I LL++
Sbjct: 23 RAGQDDEVRILIANGADVNAVDNTGLTPLHLAAVSGH-------------LEIVEVLLKH 69
Query: 1125 GAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVA 1184
GA +A V GFTPLHL+A GH ++ +LL++GADV+ G TPLHL A E + +
Sbjct: 70 GADVDAADVYGFTPLHLAAMTGHLEIVEVLLKYGADVNAFDMTGSTPLHLAADEGHLEIV 129
Query: 1185 ELLLKNNAQVDTPTKKGFTPLHIACHYGQISMAR 1218
E+LLK A V+ K G T I+ G +A+
Sbjct: 130 EVLLKYGADVNAQDKFGKTAFDISIDNGNEDLAK 163
Score = 84.7 bits (208), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 62/113 (54%)
Query: 1121 LLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDR 1180
L+ GA NA G TPLHL+A GH ++ +LL+HGADV A G TPLHL A
Sbjct: 33 LIANGADVNAVDNTGLTPLHLAAVSGHLEIVEVLLKHGADVDAADVYGFTPLHLAAMTGH 92
Query: 1181 VGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNF 1233
+ + E+LLK A V+ G TPLH+A G + + +LL A+V F
Sbjct: 93 LEIVEVLLKYGADVNAFDMTGSTPLHLAADEGHLEIVEVLLKYGADVNAQDKF 145
Score = 80.9 bits (198), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 77/168 (45%), Gaps = 29/168 (17%)
Query: 1175 CAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFP 1234
Q+D V +L+ N A V+ G TPLH+A G + + +LL A+V +
Sbjct: 24 AGQDDEV---RILIANGADVNAVDNTGLTPLHLAAVSGHLEIVEVLLKHGADVDAADVY- 79
Query: 1235 SRXXXXXXXXXXXXXXYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATN-KGFTP 1293
GFTPLH +A GH IV +LL GA NA + G TP
Sbjct: 80 -----------------------GFTPLHLAAMTGHLEIVEVLLKYGADVNAFDMTGSTP 116
Query: 1294 LHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMAR 1341
LH +A +GH IV +LL GA NA +K G T I+ G +A+
Sbjct: 117 LHLAADEGHLEIVEVLLKYGADVNAQDKF-GKTAFDISIDNGNEDLAK 163
Score = 80.1 bits (196), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 67/121 (55%)
Query: 178 APVDDVTVDYLTALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVE 237
A V+ V LT LH+AA GH + + LL AD +A + GFTPLH+A +++VE
Sbjct: 38 ADVNAVDNTGLTPLHLAAVSGHLEIVEVLLKHGADVDAADVYGFTPLHLAAMTGHLEIVE 97
Query: 238 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKN 297
+LLK+GA + A LH+A + +++VE+LLK+GA + A + + I+
Sbjct: 98 VLLKYGADVNAFDMTGSTPLHLAADEGHLEIVEVLLKYGADVNAQDKFGKTAFDISIDNG 157
Query: 298 R 298
Sbjct: 158 N 158
Score = 80.1 bits (196), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 72/138 (52%)
Query: 227 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 286
A + + V +L+ +GA + A LH+A +++VE+LLKHGA ++A
Sbjct: 21 AARAGQDDEVRILIANGADVNAVDNTGLTPLHLAAVSGHLEIVEVLLKHGADVDAADVYG 80
Query: 287 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 346
LH+A +++VE+LLK+GA + A LH+A + +++VE+LLK+GA +
Sbjct: 81 FTPLHLAAMTGHLEIVEVLLKYGADVNAFDMTGSTPLHLAADEGHLEIVEVLLKYGADVN 140
Query: 347 ATTEVREPMLHIACKKNR 364
A + + I+
Sbjct: 141 AQDKFGKTAFDISIDNGN 158
Score = 80.1 bits (196), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 72/138 (52%)
Query: 260 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 319
A + + V +L+ +GA + A LH+A +++VE+LLKHGA ++A
Sbjct: 21 AARAGQDDEVRILIANGADVNAVDNTGLTPLHLAAVSGHLEIVEVLLKHGADVDAADVYG 80
Query: 320 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 379
LH+A +++VE+LLK+GA + A LH+A + +++VE+LLK+GA +
Sbjct: 81 FTPLHLAAMTGHLEIVEVLLKYGADVNAFDMTGSTPLHLAADEGHLEIVEVLLKYGADVN 140
Query: 380 ATTEVREPMLHIACKKNR 397
A + + I+
Sbjct: 141 AQDKFGKTAFDISIDNGN 158
Score = 80.1 bits (196), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 72/138 (52%)
Query: 293 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 352
A + + V +L+ +GA + A LH+A +++VE+LLKHGA ++A
Sbjct: 21 AARAGQDDEVRILIANGADVNAVDNTGLTPLHLAAVSGHLEIVEVLLKHGADVDAADVYG 80
Query: 353 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 412
LH+A +++VE+LLK+GA + A LH+A + +++VE+LLK+GA +
Sbjct: 81 FTPLHLAAMTGHLEIVEVLLKYGADVNAFDMTGSTPLHLAADEGHLEIVEVLLKYGADVN 140
Query: 413 ATTEVREPMLHIACKKNR 430
A + + I+
Sbjct: 141 AQDKFGKTAFDISIDNGN 158
Score = 80.1 bits (196), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 72/138 (52%)
Query: 326 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 385
A + + V +L+ +GA + A LH+A +++VE+LLKHGA ++A
Sbjct: 21 AARAGQDDEVRILIANGADVNAVDNTGLTPLHLAAVSGHLEIVEVLLKHGADVDAADVYG 80
Query: 386 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 445
LH+A +++VE+LLK+GA + A LH+A + +++VE+LLK+GA +
Sbjct: 81 FTPLHLAAMTGHLEIVEVLLKYGADVNAFDMTGSTPLHLAADEGHLEIVEVLLKYGADVN 140
Query: 446 ATTEVREPMLHIACKKNR 463
A + + I+
Sbjct: 141 AQDKFGKTAFDISIDNGN 158
Score = 80.1 bits (196), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 72/138 (52%)
Query: 359 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 418
A + + V +L+ +GA + A LH+A +++VE+LLKHGA ++A
Sbjct: 21 AARAGQDDEVRILIANGADVNAVDNTGLTPLHLAAVSGHLEIVEVLLKHGADVDAADVYG 80
Query: 419 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 478
LH+A +++VE+LLK+GA + A LH+A + +++VE+LLK+GA +
Sbjct: 81 FTPLHLAAMTGHLEIVEVLLKYGADVNAFDMTGSTPLHLAADEGHLEIVEVLLKYGADVN 140
Query: 479 ATTEVREPMLHIACKKNR 496
A + + I+
Sbjct: 141 AQDKFGKTAFDISIDNGN 158
Score = 80.1 bits (196), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 72/138 (52%)
Query: 392 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 451
A + + V +L+ +GA + A LH+A +++VE+LLKHGA ++A
Sbjct: 21 AARAGQDDEVRILIANGADVNAVDNTGLTPLHLAAVSGHLEIVEVLLKHGADVDAADVYG 80
Query: 452 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 511
LH+A +++VE+LLK+GA + A LH+A + +++VE+LLK+GA +
Sbjct: 81 FTPLHLAAMTGHLEIVEVLLKYGADVNAFDMTGSTPLHLAADEGHLEIVEVLLKYGADVN 140
Query: 512 ATTEVREPMLHIACKKNR 529
A + + I+
Sbjct: 141 AQDKFGKTAFDISIDNGN 158
Score = 80.1 bits (196), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 72/138 (52%)
Query: 425 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 484
A + + V +L+ +GA + A LH+A +++VE+LLKHGA ++A
Sbjct: 21 AARAGQDDEVRILIANGADVNAVDNTGLTPLHLAAVSGHLEIVEVLLKHGADVDAADVYG 80
Query: 485 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 544
LH+A +++VE+LLK+GA + A LH+A + +++VE+LLK+GA +
Sbjct: 81 FTPLHLAAMTGHLEIVEVLLKYGADVNAFDMTGSTPLHLAADEGHLEIVEVLLKYGADVN 140
Query: 545 ATTEVREPMLHIACKKNR 562
A + + I+
Sbjct: 141 AQDKFGKTAFDISIDNGN 158
Score = 80.1 bits (196), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 72/138 (52%)
Query: 458 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 517
A + + V +L+ +GA + A LH+A +++VE+LLKHGA ++A
Sbjct: 21 AARAGQDDEVRILIANGADVNAVDNTGLTPLHLAAVSGHLEIVEVLLKHGADVDAADVYG 80
Query: 518 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 577
LH+A +++VE+LLK+GA + A LH+A + +++VE+LLK+GA +
Sbjct: 81 FTPLHLAAMTGHLEIVEVLLKYGADVNAFDMTGSTPLHLAADEGHLEIVEVLLKYGADVN 140
Query: 578 ATTEVREPMLHIACKKNR 595
A + + I+
Sbjct: 141 AQDKFGKTAFDISIDNGN 158
Score = 80.1 bits (196), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 72/138 (52%)
Query: 491 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 550
A + + V +L+ +GA + A LH+A +++VE+LLKHGA ++A
Sbjct: 21 AARAGQDDEVRILIANGADVNAVDNTGLTPLHLAAVSGHLEIVEVLLKHGADVDAADVYG 80
Query: 551 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 610
LH+A +++VE+LLK+GA + A LH+A + +++VE+LLK+GA +
Sbjct: 81 FTPLHLAAMTGHLEIVEVLLKYGADVNAFDMTGSTPLHLAADEGHLEIVEVLLKYGADVN 140
Query: 611 ATTEVREPMLHIACKKNR 628
A + + I+
Sbjct: 141 AQDKFGKTAFDISIDNGN 158
Score = 80.1 bits (196), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 72/138 (52%)
Query: 524 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 583
A + + V +L+ +GA + A LH+A +++VE+LLKHGA ++A
Sbjct: 21 AARAGQDDEVRILIANGADVNAVDNTGLTPLHLAAVSGHLEIVEVLLKHGADVDAADVYG 80
Query: 584 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 643
LH+A +++VE+LLK+GA + A LH+A + +++VE+LLK+GA +
Sbjct: 81 FTPLHLAAMTGHLEIVEVLLKYGADVNAFDMTGSTPLHLAADEGHLEIVEVLLKYGADVN 140
Query: 644 ATTEVREPMLHIACKKNR 661
A + + I+
Sbjct: 141 AQDKFGKTAFDISIDNGN 158
Score = 80.1 bits (196), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 72/138 (52%)
Query: 557 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 616
A + + V +L+ +GA + A LH+A +++VE+LLKHGA ++A
Sbjct: 21 AARAGQDDEVRILIANGADVNAVDNTGLTPLHLAAVSGHLEIVEVLLKHGADVDAADVYG 80
Query: 617 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 676
LH+A +++VE+LLK+GA + A LH+A + +++VE+LLK+GA +
Sbjct: 81 FTPLHLAAMTGHLEIVEVLLKYGADVNAFDMTGSTPLHLAADEGHLEIVEVLLKYGADVN 140
Query: 677 ATTEVREPMLHIACKKNR 694
A + + I+
Sbjct: 141 AQDKFGKTAFDISIDNGN 158
Score = 80.1 bits (196), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 72/138 (52%)
Query: 590 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 649
A + + V +L+ +GA + A LH+A +++VE+LLKHGA ++A
Sbjct: 21 AARAGQDDEVRILIANGADVNAVDNTGLTPLHLAAVSGHLEIVEVLLKHGADVDAADVYG 80
Query: 650 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 709
LH+A +++VE+LLK+GA + A LH+A + +++VE+LLK+GA +
Sbjct: 81 FTPLHLAAMTGHLEIVEVLLKYGADVNAFDMTGSTPLHLAADEGHLEIVEVLLKYGADVN 140
Query: 710 ATTEVREPMLHIACKKNR 727
A + + I+
Sbjct: 141 AQDKFGKTAFDISIDNGN 158
Score = 80.1 bits (196), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 72/138 (52%)
Query: 623 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 682
A + + V +L+ +GA + A LH+A +++VE+LLKHGA ++A
Sbjct: 21 AARAGQDDEVRILIANGADVNAVDNTGLTPLHLAAVSGHLEIVEVLLKHGADVDAADVYG 80
Query: 683 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 742
LH+A +++VE+LLK+GA + A LH+A + +++VE+LLK+GA +
Sbjct: 81 FTPLHLAAMTGHLEIVEVLLKYGADVNAFDMTGSTPLHLAADEGHLEIVEVLLKYGADVN 140
Query: 743 ATTEVREPMLHIACKKNR 760
A + + I+
Sbjct: 141 AQDKFGKTAFDISIDNGN 158
Score = 80.1 bits (196), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 72/138 (52%)
Query: 656 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 715
A + + V +L+ +GA + A LH+A +++VE+LLKHGA ++A
Sbjct: 21 AARAGQDDEVRILIANGADVNAVDNTGLTPLHLAAVSGHLEIVEVLLKHGADVDAADVYG 80
Query: 716 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 775
LH+A +++VE+LLK+GA + A LH+A + +++VE+LLK+GA +
Sbjct: 81 FTPLHLAAMTGHLEIVEVLLKYGADVNAFDMTGSTPLHLAADEGHLEIVEVLLKYGADVN 140
Query: 776 ATTEVREPMLHIACKKNR 793
A + + I+
Sbjct: 141 AQDKFGKTAFDISIDNGN 158
Score = 80.1 bits (196), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 72/138 (52%)
Query: 689 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 748
A + + V +L+ +GA + A LH+A +++VE+LLKHGA ++A
Sbjct: 21 AARAGQDDEVRILIANGADVNAVDNTGLTPLHLAAVSGHLEIVEVLLKHGADVDAADVYG 80
Query: 749 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 808
LH+A +++VE+LLK+GA + A LH+A + +++VE+LLK+GA +
Sbjct: 81 FTPLHLAAMTGHLEIVEVLLKYGADVNAFDMTGSTPLHLAADEGHLEIVEVLLKYGADVN 140
Query: 809 ATTEVREPMLHIACKKNR 826
A + + I+
Sbjct: 141 AQDKFGKTAFDISIDNGN 158
Score = 80.1 bits (196), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 72/138 (52%)
Query: 722 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 781
A + + V +L+ +GA + A LH+A +++VE+LLKHGA ++A
Sbjct: 21 AARAGQDDEVRILIANGADVNAVDNTGLTPLHLAAVSGHLEIVEVLLKHGADVDAADVYG 80
Query: 782 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 841
LH+A +++VE+LLK+GA + A LH+A + +++VE+LLK+GA +
Sbjct: 81 FTPLHLAAMTGHLEIVEVLLKYGADVNAFDMTGSTPLHLAADEGHLEIVEVLLKYGADVN 140
Query: 842 ATTEVREPMLHIACKKNR 859
A + + I+
Sbjct: 141 AQDKFGKTAFDISIDNGN 158
Score = 80.1 bits (196), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 72/138 (52%)
Query: 755 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 814
A + + V +L+ +GA + A LH+A +++VE+LLKHGA ++A
Sbjct: 21 AARAGQDDEVRILIANGADVNAVDNTGLTPLHLAAVSGHLEIVEVLLKHGADVDAADVYG 80
Query: 815 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 874
LH+A +++VE+LLK+GA + A LH+A + +++VE+LLK+GA +
Sbjct: 81 FTPLHLAAMTGHLEIVEVLLKYGADVNAFDMTGSTPLHLAADEGHLEIVEVLLKYGADVN 140
Query: 875 ATTEVREPMLHIACKKNR 892
A + + I+
Sbjct: 141 AQDKFGKTAFDISIDNGN 158
Score = 80.1 bits (196), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 72/138 (52%)
Query: 788 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 847
A + + V +L+ +GA + A LH+A +++VE+LLKHGA ++A
Sbjct: 21 AARAGQDDEVRILIANGADVNAVDNTGLTPLHLAAVSGHLEIVEVLLKHGADVDAADVYG 80
Query: 848 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 907
LH+A +++VE+LLK+GA + A LH+A + +++VE+LLK+GA +
Sbjct: 81 FTPLHLAAMTGHLEIVEVLLKYGADVNAFDMTGSTPLHLAADEGHLEIVEVLLKYGADVN 140
Query: 908 ATTEVREPMLHIACKKNR 925
A + + I+
Sbjct: 141 AQDKFGKTAFDISIDNGN 158
Score = 80.1 bits (196), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 71/114 (62%)
Query: 992 TPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTS 1051
TPLH+A+ G+++IV +LL+HGA VD+ +T LH+AA G E+ VLL+ GA + +
Sbjct: 49 TPLHLAAVSGHLEIVEVLLKHGADVDAADVYGFTPLHLAAMTGHLEIVEVLLKYGADVNA 108
Query: 1052 TTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVA 1105
G TPLHL GH+++ ++LL+ A V+ Q K G T ++ ++++A
Sbjct: 109 FDMTGSTPLHLAADEGHLEIVEVLLKYGADVNAQDKFGKTAFDISIDNGNEDLA 162
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 77/144 (53%), Gaps = 1/144 (0%)
Query: 821 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 880
A + + V +L+ +GA + A LH+A +++VE+LLKHGA ++A
Sbjct: 21 AARAGQDDEVRILIANGADVNAVDNTGLTPLHLAAVSGHLEIVEVLLKHGADVDAADVYG 80
Query: 881 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASSH 940
LH+A +++VE+LLK+GA + A LH+A + +++VE+LLK+GA +
Sbjct: 81 FTPLHLAAMTGHLEIVEVLLKYGADVNAFDMTGSTPLHLAADEGHLEIVEVLLKYGADVN 140
Query: 941 VVSCYSNVKVHVSL-NKIQDVSSS 963
+ +S+ N +D++ S
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAKS 164
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 65/122 (53%), Gaps = 3/122 (2%)
Query: 1253 NTTDQ-GFTPLHHSAQQGHSTIVALLLDRGASPNATN-KGFTPLHHSAQQGHSTIVALLL 1310
N D G TPLH +A GH IV +LL GA +A + GFTPLH +A GH IV +LL
Sbjct: 41 NAVDNTGLTPLHLAAVSGHLEIVEVLLKHGADVDAADVYGFTPLHLAAMTGHLEIVEVLL 100
Query: 1311 DRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHS 1370
GA NA + T G TPLH+A G + + +LL A+V+ G T S G+
Sbjct: 101 KYGADVNAFDMT-GSTPLHLAADEGHLEIVEVLLKYGADVNAQDKFGKTAFDISIDNGNE 159
Query: 1371 TI 1372
+
Sbjct: 160 DL 161
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 78/142 (54%), Gaps = 22/142 (15%)
Query: 40 AAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISSKTKVR 99
AA+ G+ + V +L++ GA+++ GLT LH AA SGH ++E+LL+ GA + + V
Sbjct: 21 AARAGQDDEVRILIANGADVNAVDNTGLTPLHLAAVSGHLEIVEVLLKHGADVDA-ADVY 79
Query: 100 GFYILR----SGHEAVIEMLLEQGAPISSKTKVAAVLLENGASLTSTTKKGFTPLHLTGK 155
GF L +GH ++E+LL+ GA + N +T G TPLHL
Sbjct: 80 GFTPLHLAAMTGHLEIVEVLLKYGADV------------NAFDMT-----GSTPLHLAAD 122
Query: 156 YGHIKVAKLLLQKDAPVDFQGK 177
GH+++ ++LL+ A V+ Q K
Sbjct: 123 EGHLEIVEVLLKYGADVNAQDK 144
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 80/187 (42%), Gaps = 44/187 (23%)
Query: 887 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASSHVVSCYS 946
A + + V +L+ +GA + A LH+A +++VE+LLKHGA Y
Sbjct: 21 AARAGQDDEVRILIANGADVNAVDNTGLTPLHLAAVSGHLEIVEVLLKHGADVDAADVYG 80
Query: 947 NVKVHVSLNKIQDVSSSILRLATCDVLPQCETRLNFSNLRVREQQTPLHIASRLGNVDIV 1006
TPLH+A+ G+++IV
Sbjct: 81 --------------------------------------------FTPLHLAAMTGHLEIV 96
Query: 1007 MLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKY 1066
+LL++GA V++ T LH+AA EG E+ VLL+ GA + + K G T ++
Sbjct: 97 EVLLKYGADVNAFDMTGSTPLHLAADEGHLEIVEVLLKYGADVNAQDKFGKTAFDISIDN 156
Query: 1067 GHIKVAK 1073
G+ +AK
Sbjct: 157 GNEDLAK 163
Score = 60.8 bits (146), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 59/100 (59%), Gaps = 5/100 (5%)
Query: 34 ITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPIS 93
+TPLH+AA G +V +LL GA++D G T LH AA +GH ++E+LL+ GA ++
Sbjct: 48 LTPLHLAAVSGHLEIVEVLLKHGADVDAADVYGFTPLHLAAMTGHLEIVEVLLKYGADVN 107
Query: 94 SKTKVRGFYIL----RSGHEAVIEMLLEQGAPISSKTKVA 129
+ + G L GH ++E+LL+ GA ++++ K
Sbjct: 108 A-FDMTGSTPLHLAADEGHLEIVEVLLKYGADVNAQDKFG 146
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%)
Query: 32 HNITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAP 91
+ TPLH+AA G +V +LL GA+++ G T LH AA GH ++E+LL+ GA
Sbjct: 79 YGFTPLHLAAMTGHLEIVEVLLKYGADVNAFDMTGSTPLHLAADEGHLEIVEVLLKYGAD 138
Query: 92 ISSKTKV 98
++++ K
Sbjct: 139 VNAQDKF 145
Score = 36.2 bits (82), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 7/66 (10%)
Query: 14 KYSQKVINTINPFGSHFQHNITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCA 73
KY V N + GS TPLH+AA G +V +LL GA+++ + + G TA +
Sbjct: 101 KYGADV-NAFDMTGS------TPLHLAADEGHLEIVEVLLKYGADVNAQDKFGKTAFDIS 153
Query: 74 ARSGHE 79
+G+E
Sbjct: 154 IDNGNE 159
>pdb|3AJI|A Chain A, Structure Of Gankyrin-S6atpase Photo-Cross-Linked
Site-Specifically, And Incoporated By Genetic Code
Expansion
pdb|3AJI|C Chain C, Structure Of Gankyrin-S6atpase Photo-Cross-Linked
Site-Specifically, And Incoporated By Genetic Code
Expansion
Length = 231
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 96/190 (50%), Gaps = 13/190 (6%)
Query: 1019 TTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQK 1078
T +D TALH A G E+ LL+ G + G++PLH+ G ++ K LL K
Sbjct: 36 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVK 95
Query: 1079 DAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTP 1138
A V+ +NG TPLH A+ + +A++LLE GA+ P+A+ T
Sbjct: 96 GAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGAN-------------PDAKDHYDATA 142
Query: 1139 LHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPT 1198
+H +A++G+ M +LL + A + G TPLHL E+RV A+ L+ A +
Sbjct: 143 MHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIEN 202
Query: 1199 KKGFTPLHIA 1208
K+ TPL +A
Sbjct: 203 KEEKTPLQVA 212
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 88/174 (50%), Gaps = 10/174 (5%)
Query: 140 TSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKAPVDDVTVDYLTALHVAAHCGH 199
T T + T LH GH ++ + LLQ PV+ + A + LH+AA G
Sbjct: 34 TRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAG--------WSPLHIAASAGX 85
Query: 200 ARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHI 259
+ K LL K A NA NG TPLH A KNR ++ +LL+ GA+ +A +H
Sbjct: 86 DEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHR 145
Query: 260 ACKKNRIKVVELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASI 312
A K +K+V +LL + AS TE P LH+AC + R++ + L+ GASI
Sbjct: 146 AAAKGNLKMVHILLFYKASTNIQDTEGNTP-LHLACDEERVEEAKFLVTQGASI 198
Score = 84.7 bits (208), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 83/161 (51%), Gaps = 2/161 (1%)
Query: 186 DYLTALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGAS 245
D TALH A GH + + LL N + G++PLHIA ++V+ LL GA
Sbjct: 39 DSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAH 98
Query: 246 IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 305
+ A + LH A KNR ++ +LL+ GA+ +A +H A K +K+V +L
Sbjct: 99 VNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHIL 158
Query: 306 LKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASI 345
L + AS TE P LH+AC + R++ + L+ GASI
Sbjct: 159 LFYKASTNIQDTEGNTP-LHLACDEERVEEAKFLVTQGASI 198
Score = 83.6 bits (205), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 94/194 (48%), Gaps = 13/194 (6%)
Query: 1036 EEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHV 1095
+E+ +L + + T T + T LH GH ++ + LLQ PV+ + G +PLH+
Sbjct: 20 DELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHI 79
Query: 1096 ASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLL 1155
A+ + LL KGA + NA + G TPLH +AS+ +++ MLL
Sbjct: 80 AASAGXDEIVKALLVKGAHV-------------NAVNQNGCTPLHYAASKNRHEIAVMLL 126
Query: 1156 EHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQIS 1215
E GA+ T +H A + + + +LL A + +G TPLH+AC ++
Sbjct: 127 EGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVE 186
Query: 1216 MARLLLDQSANVTV 1229
A+ L+ Q A++ +
Sbjct: 187 EAKFLVTQGASIYI 200
Score = 81.6 bits (200), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 88/178 (49%), Gaps = 7/178 (3%)
Query: 202 VAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIAC 261
+A L + D ++R T LH AC ++VE LL+ G + + LHIA
Sbjct: 27 LADKSLATRTDQDSR-----TALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAA 81
Query: 262 KKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREP 321
++V+ LL GA + A + LH A KNR ++ +LL+ GA+ +A
Sbjct: 82 SAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDAT 141
Query: 322 MLHIACKKNRIKVVELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASI 378
+H A K +K+V +LL + AS TE P LH+AC + R++ + L+ GASI
Sbjct: 142 AMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTP-LHLACDEERVEEAKFLVTQGASI 198
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 81/164 (49%), Gaps = 2/164 (1%)
Query: 249 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 308
T + LH AC ++VE LL+ G + + LHIA ++V+ LL
Sbjct: 36 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVK 95
Query: 309 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 368
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K+V
Sbjct: 96 GAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMV 155
Query: 369 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASI 411
+LL + AS TE P LH+AC + R++ + L+ GASI
Sbjct: 156 HILLFYKASTNIQDTEGNTP-LHLACDEERVEEAKFLVTQGASI 198
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 81/164 (49%), Gaps = 2/164 (1%)
Query: 282 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 341
T + LH AC ++VE LL+ G + + LHIA ++V+ LL
Sbjct: 36 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVK 95
Query: 342 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 401
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K+V
Sbjct: 96 GAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMV 155
Query: 402 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASI 444
+LL + AS TE P LH+AC + R++ + L+ GASI
Sbjct: 156 HILLFYKASTNIQDTEGNTP-LHLACDEERVEEAKFLVTQGASI 198
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 81/164 (49%), Gaps = 2/164 (1%)
Query: 315 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 374
T + LH AC ++VE LL+ G + + LHIA ++V+ LL
Sbjct: 36 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVK 95
Query: 375 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 434
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K+V
Sbjct: 96 GAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMV 155
Query: 435 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASI 477
+LL + AS TE P LH+AC + R++ + L+ GASI
Sbjct: 156 HILLFYKASTNIQDTEGNTP-LHLACDEERVEEAKFLVTQGASI 198
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 81/164 (49%), Gaps = 2/164 (1%)
Query: 348 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 407
T + LH AC ++VE LL+ G + + LHIA ++V+ LL
Sbjct: 36 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVK 95
Query: 408 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 467
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K+V
Sbjct: 96 GAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMV 155
Query: 468 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASI 510
+LL + AS TE P LH+AC + R++ + L+ GASI
Sbjct: 156 HILLFYKASTNIQDTEGNTP-LHLACDEERVEEAKFLVTQGASI 198
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 81/164 (49%), Gaps = 2/164 (1%)
Query: 381 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 440
T + LH AC ++VE LL+ G + + LHIA ++V+ LL
Sbjct: 36 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVK 95
Query: 441 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 500
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K+V
Sbjct: 96 GAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMV 155
Query: 501 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASI 543
+LL + AS TE P LH+AC + R++ + L+ GASI
Sbjct: 156 HILLFYKASTNIQDTEGNTP-LHLACDEERVEEAKFLVTQGASI 198
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 81/164 (49%), Gaps = 2/164 (1%)
Query: 414 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 473
T + LH AC ++VE LL+ G + + LHIA ++V+ LL
Sbjct: 36 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVK 95
Query: 474 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 533
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K+V
Sbjct: 96 GAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMV 155
Query: 534 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASI 576
+LL + AS TE P LH+AC + R++ + L+ GASI
Sbjct: 156 HILLFYKASTNIQDTEGNTP-LHLACDEERVEEAKFLVTQGASI 198
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 81/164 (49%), Gaps = 2/164 (1%)
Query: 447 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 506
T + LH AC ++VE LL+ G + + LHIA ++V+ LL
Sbjct: 36 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVK 95
Query: 507 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 566
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K+V
Sbjct: 96 GAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMV 155
Query: 567 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASI 609
+LL + AS TE P LH+AC + R++ + L+ GASI
Sbjct: 156 HILLFYKASTNIQDTEGNTP-LHLACDEERVEEAKFLVTQGASI 198
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 81/164 (49%), Gaps = 2/164 (1%)
Query: 480 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 539
T + LH AC ++VE LL+ G + + LHIA ++V+ LL
Sbjct: 36 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVK 95
Query: 540 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 599
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K+V
Sbjct: 96 GAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMV 155
Query: 600 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASI 642
+LL + AS TE P LH+AC + R++ + L+ GASI
Sbjct: 156 HILLFYKASTNIQDTEGNTP-LHLACDEERVEEAKFLVTQGASI 198
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 81/164 (49%), Gaps = 2/164 (1%)
Query: 513 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 572
T + LH AC ++VE LL+ G + + LHIA ++V+ LL
Sbjct: 36 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVK 95
Query: 573 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 632
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K+V
Sbjct: 96 GAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMV 155
Query: 633 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASI 675
+LL + AS TE P LH+AC + R++ + L+ GASI
Sbjct: 156 HILLFYKASTNIQDTEGNTP-LHLACDEERVEEAKFLVTQGASI 198
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 81/164 (49%), Gaps = 2/164 (1%)
Query: 546 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 605
T + LH AC ++VE LL+ G + + LHIA ++V+ LL
Sbjct: 36 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVK 95
Query: 606 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 665
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K+V
Sbjct: 96 GAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMV 155
Query: 666 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASI 708
+LL + AS TE P LH+AC + R++ + L+ GASI
Sbjct: 156 HILLFYKASTNIQDTEGNTP-LHLACDEERVEEAKFLVTQGASI 198
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 81/164 (49%), Gaps = 2/164 (1%)
Query: 579 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 638
T + LH AC ++VE LL+ G + + LHIA ++V+ LL
Sbjct: 36 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVK 95
Query: 639 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 698
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K+V
Sbjct: 96 GAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMV 155
Query: 699 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASI 741
+LL + AS TE P LH+AC + R++ + L+ GASI
Sbjct: 156 HILLFYKASTNIQDTEGNTP-LHLACDEERVEEAKFLVTQGASI 198
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 81/164 (49%), Gaps = 2/164 (1%)
Query: 612 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 671
T + LH AC ++VE LL+ G + + LHIA ++V+ LL
Sbjct: 36 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVK 95
Query: 672 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 731
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K+V
Sbjct: 96 GAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMV 155
Query: 732 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASI 774
+LL + AS TE P LH+AC + R++ + L+ GASI
Sbjct: 156 HILLFYKASTNIQDTEGNTP-LHLACDEERVEEAKFLVTQGASI 198
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 81/164 (49%), Gaps = 2/164 (1%)
Query: 645 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 704
T + LH AC ++VE LL+ G + + LHIA ++V+ LL
Sbjct: 36 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVK 95
Query: 705 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 764
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K+V
Sbjct: 96 GAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMV 155
Query: 765 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASI 807
+LL + AS TE P LH+AC + R++ + L+ GASI
Sbjct: 156 HILLFYKASTNIQDTEGNTP-LHLACDEERVEEAKFLVTQGASI 198
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 81/164 (49%), Gaps = 2/164 (1%)
Query: 678 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 737
T + LH AC ++VE LL+ G + + LHIA ++V+ LL
Sbjct: 36 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVK 95
Query: 738 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 797
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K+V
Sbjct: 96 GAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMV 155
Query: 798 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASI 840
+LL + AS TE P LH+AC + R++ + L+ GASI
Sbjct: 156 HILLFYKASTNIQDTEGNTP-LHLACDEERVEEAKFLVTQGASI 198
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 81/164 (49%), Gaps = 2/164 (1%)
Query: 711 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 770
T + LH AC ++VE LL+ G + + LHIA ++V+ LL
Sbjct: 36 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVK 95
Query: 771 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 830
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K+V
Sbjct: 96 GAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMV 155
Query: 831 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASI 873
+LL + AS TE P LH+AC + R++ + L+ GASI
Sbjct: 156 HILLFYKASTNIQDTEGNTP-LHLACDEERVEEAKFLVTQGASI 198
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 81/164 (49%), Gaps = 2/164 (1%)
Query: 744 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 803
T + LH AC ++VE LL+ G + + LHIA ++V+ LL
Sbjct: 36 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVK 95
Query: 804 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 863
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K+V
Sbjct: 96 GAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMV 155
Query: 864 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASI 906
+LL + AS TE P LH+AC + R++ + L+ GASI
Sbjct: 156 HILLFYKASTNIQDTEGNTP-LHLACDEERVEEAKFLVTQGASI 198
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 85/187 (45%), Gaps = 26/187 (13%)
Query: 1203 TPLHIACHYGQISMARLLLDQSANVTVPKNFPSRXXXXXXXXXXXXXXYTNTTDQGFTPL 1262
T LH AC G + LL + VP N + D G++PL
Sbjct: 42 TALHWACSAGHTEIVEFLL----QLGVPVN--------------------DKDDAGWSPL 77
Query: 1263 HHSAQQGHSTIVALLLDRGASPNATNK-GFTPLHHSAQQGHSTIVALLLDRGASPNATNK 1321
H +A G IV LL +GA NA N+ G TPLH++A + I +LL+ GA+P+A +
Sbjct: 78 HIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDH 137
Query: 1322 TRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGA 1381
T +H A G + M +LL A+ + +G TPLH + + L+ +GA
Sbjct: 138 YDA-TAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGA 196
Query: 1382 SPNATNK 1388
S NK
Sbjct: 197 SIYIENK 203
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 93/199 (46%), Gaps = 28/199 (14%)
Query: 1166 KNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSA 1225
++ T LH + E LL+ V+ G++PLHIA G + + LL + A
Sbjct: 38 QDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGA 97
Query: 1226 NVTVPKNFPSRXXXXXXXXXXXXXXYTNTTDQ-GFTPLHHSAQQGHSTIVALLLDRGASP 1284
+V N +Q G TPLH++A + I +LL+ GA+P
Sbjct: 98 HV-------------------------NAVNQNGCTPLHYAASKNRHEIAVMLLEGGANP 132
Query: 1285 NATN-KGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLL 1343
+A + T +H +A +G+ +V +LL AS N + T G TPLH+AC ++ A+ L
Sbjct: 133 DAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQD-TEGNTPLHLACDEERVEEAKFL 191
Query: 1344 LDQSANVSCTTDQGFTPLH 1362
+ Q A++ + TPL
Sbjct: 192 VTQGASIYIENKEEKTPLQ 210
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 82/166 (49%), Gaps = 2/166 (1%)
Query: 777 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 836
T + LH AC ++VE LL+ G + + LHIA ++V+ LL
Sbjct: 36 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVK 95
Query: 837 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 896
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K+V
Sbjct: 96 GAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMV 155
Query: 897 ELLLKHGASIE-ATTEVREPMLHIACKKNRIKVVELLLKHGASSHV 941
+LL + AS TE P LH+AC + R++ + L+ GAS ++
Sbjct: 156 HILLFYKASTNIQDTEGNTP-LHLACDEERVEEAKFLVTQGASIYI 200
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 69/126 (54%)
Query: 992 TPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTS 1051
+PLHIA+ G +IV LL GA V++ ++ T LH AA + + E+A +LLE GA+ +
Sbjct: 75 SPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDA 134
Query: 1052 TTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEK 1111
T +H G++K+ +LL A + Q G TPLH+A + A L+ +
Sbjct: 135 KDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQ 194
Query: 1112 GASMDI 1117
GAS+ I
Sbjct: 195 GASIYI 200
Score = 70.1 bits (170), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 93/204 (45%), Gaps = 13/204 (6%)
Query: 810 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 869
T + LH AC ++VE LL+ G + + LHIA ++V+ LL
Sbjct: 36 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVK 95
Query: 870 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 929
GA + A + LH A KNR ++ +LL+ GA+ +A +H A K +K+V
Sbjct: 96 GAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMV 155
Query: 930 ELLLKHGASSHVVSCYSNVKVHVSLNKIQDVSSSILRLATCDVLPQCETRLNFSNLRVRE 989
+LL + AS+++ N +H++ ++ + + L + + +E
Sbjct: 156 HILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIY-----------IENKE 204
Query: 990 QQTPLHIASRLGNVDIVMLLLQHG 1013
++TPL +A G + +++ L G
Sbjct: 205 EKTPLQVAK--GGLGLILKRLAEG 226
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 78/175 (44%), Gaps = 26/175 (14%)
Query: 1116 DIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLC 1175
+I LL+ G N + AG++PLH++AS G ++ LL GA V+ +NG TPLH
Sbjct: 54 EIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYA 113
Query: 1176 AQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPS 1235
A ++R +A +LL+ A D T +H A G + M +LL A+
Sbjct: 114 ASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKAS--------- 164
Query: 1236 RXXXXXXXXXXXXXXYTNTTD-QGFTPLHHSAQQGHSTIVALLLDRGASPNATNK 1289
TN D +G TPLH + + L+ +GAS NK
Sbjct: 165 ----------------TNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENK 203
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 86/196 (43%), Gaps = 26/196 (13%)
Query: 1137 TPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDT 1196
T LH + S GH ++ LL+ G V+ G +PLH+ A + + LL A V+
Sbjct: 42 TALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNA 101
Query: 1197 PTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRXXXXXXXXXXXXXXYTNTTD 1256
+ G TPLH A + +A +LL+ AN ++ +
Sbjct: 102 VNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDA--------------------- 140
Query: 1257 QGFTPLHHSAQQGHSTIVALLLDRGASPNATN-KGFTPLHHSAQQGHSTIVALLLDRGAS 1315
T +H +A +G+ +V +LL AS N + +G TPLH + + L+ +GAS
Sbjct: 141 ---TAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGAS 197
Query: 1316 PNATNKTRGFTPLHIA 1331
NK TPL +A
Sbjct: 198 IYIENKEEK-TPLQVA 212
Score = 53.9 bits (128), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 67/153 (43%), Gaps = 14/153 (9%)
Query: 25 PFGSHFQHNITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEM 84
P +PLH+AA G +V LL +GA+++ ++G T LH AA + M
Sbjct: 65 PVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVM 124
Query: 85 LLEQGAPISSKTKVRGFYILRSGHEAVIEMLLEQGAPISSKTKVAAVLLENGASLTSTTK 144
LLE GA +K + R+ + ++M+ +LL AS
Sbjct: 125 LLEGGANPDAKDHYDATAMHRAAAKGNLKMV--------------HILLFYKASTNIQDT 170
Query: 145 KGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGK 177
+G TPLHL ++ AK L+ + A + + K
Sbjct: 171 EGNTPLHLACDEERVEEAKFLVTQGASIYIENK 203
Score = 38.5 bits (88), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Query: 20 INTINPFGSHFQHNITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHE 79
+N +N Q+ TPLH AA + + +LL GAN D K TA+H AA G+
Sbjct: 99 VNAVN------QNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNL 152
Query: 80 AVIEMLL 86
++ +LL
Sbjct: 153 KMVHILL 159
>pdb|4G8K|A Chain A, Intact Sensor Domain Of Human Rnase L In The Inactive
Signaling State
pdb|4G8K|B Chain B, Intact Sensor Domain Of Human Rnase L In The Inactive
Signaling State
pdb|4G8L|A Chain A, Active State Of Intact Sensor Domain Of Human Rnase L With
2-5a Bound
pdb|4G8L|B Chain B, Active State Of Intact Sensor Domain Of Human Rnase L With
2-5a Bound
pdb|4G8L|C Chain C, Active State Of Intact Sensor Domain Of Human Rnase L With
2-5a Bound
pdb|4G8L|D Chain D, Active State Of Intact Sensor Domain Of Human Rnase L With
2-5a Bound
Length = 337
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 120/279 (43%), Gaps = 23/279 (8%)
Query: 1114 SMDIATTLLEYGAKPN-AESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPL 1172
+D+ LLE GA N E G+TPLH + D+ +LL HGAD KNG TP
Sbjct: 37 DVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPF 96
Query: 1173 HLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKN 1232
L A V + +L L A V+ GFT A YG++ + L + ANV + +
Sbjct: 97 ILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRK 156
Query: 1233 FPSRXXXXXXXXXXXXXXYTNTTDQGFTPLHHSAQQGHSTIVALLLDR-GASPNA-TNKG 1290
G T L +A++GH ++ +LLD GA NA N G
Sbjct: 157 TKEDQERLRKG--------------GATALMDAAEKGHVEVLKILLDEMGADVNACDNMG 202
Query: 1291 FTPLHH----SAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQ 1346
L H S I LLLD GA N + RG TPL +A + + + LL+Q
Sbjct: 203 RNALIHALLSSDDSDVEAITHLLLDHGADVNVRGE-RGKTPLILAVEKKHLGLVQRLLEQ 261
Query: 1347 S-ANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGASPN 1384
++ T G T L + + I LL RGAS +
Sbjct: 262 EHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTD 300
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 135/307 (43%), Gaps = 30/307 (9%)
Query: 47 NMVTLLLSRGANIDNKTRDG-LTALHCAARSGHEAVIEMLLEQGA-PISSKTKVRGFYIL 104
++V LL GAN++ + +G T LH A + E ++E+LL GA P+ K +IL
Sbjct: 39 DLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFIL 98
Query: 105 RSGHEAVIEMLLEQGAPISSKTKVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKL 164
A I+ K+ + L GA + GFT YG +K K
Sbjct: 99 ---------------AAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKF 143
Query: 165 LLQKDAPVDFQGKAPVDDVTV--DYLTALHVAAHCGHARVAKTLLDK-KADPNARALNGF 221
L ++ A V+ + K D + TAL AA GH V K LLD+ AD NA G
Sbjct: 144 LYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGR 203
Query: 222 TPLHIACKKNRIKVVE----LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG- 276
L A + VE LLL HGA + E + L +A +K + +V+ LL+
Sbjct: 204 NALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEH 263
Query: 277 ASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVE 336
I T + L +A + K+ ELL K GAS + ++ A + +V+
Sbjct: 264 IEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGD-----LVMTARRNYDHSLVK 318
Query: 337 LLLKHGA 343
+LL HGA
Sbjct: 319 VLLSHGA 325
Score = 77.4 bits (189), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 119/262 (45%), Gaps = 30/262 (11%)
Query: 983 SNLRVREQQ---TPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVA 1039
+N+ +E++ TPLH A ++ DIV LLL+HGA K+ T +AA G ++
Sbjct: 49 ANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLL 108
Query: 1040 AVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQ----------GKNG 1089
+ L GA + GFT YG +K K L ++ A V+ + K G
Sbjct: 109 KLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGG 168
Query: 1090 VTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPL-HLSASEGHA 1148
T L A+ H V +LL+ E GA NA G L H S +
Sbjct: 169 ATALMDAAEKGHVEVLKILLD------------EMGADVNACDNMGRNALIHALLSSDDS 216
Query: 1149 DMSA---MLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLL-KNNAQVDTPTKKGFTP 1204
D+ A +LL+HGADV+ + G TPL L ++ +G+ + LL + + +++ G T
Sbjct: 217 DVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTA 276
Query: 1205 LHIACHYGQISMARLLLDQSAN 1226
L +A +A LL + A+
Sbjct: 277 LLLAVELKLKKIAELLCKRGAS 298
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 122/272 (44%), Gaps = 21/272 (7%)
Query: 220 GFTPLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 279
G+TPLH A + +R +VELLL+HGA + +A +K+++L L GA +
Sbjct: 59 GWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLLKLFLSKGADV 118
Query: 280 EATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM----------LHIACKK 329
A ++K ++ L K GA++ + +E L A +K
Sbjct: 119 NECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEK 178
Query: 330 NRIKVVELLLKH-GASIEATTEV-REPMLHIACKKNRIKV---VELLLKHGASIEATTEV 384
++V+++LL GA + A + R ++H + V LLL HGA + E
Sbjct: 179 GHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGER 238
Query: 385 REPMLHIACKKNRIKVVELLLKHG-ASIEATTEVREPMLHIACKKNRIKVVELLLKHGAS 443
+ L +A +K + +V+ LL+ I T + L +A + K+ ELL K GAS
Sbjct: 239 GKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGAS 298
Query: 444 IEATTEVREPMLHIACKKNRIKVVELLLKHGA 475
+ ++ A + +V++LL HGA
Sbjct: 299 TDCGD-----LVMTARRNYDHSLVKVLLSHGA 325
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 131/298 (43%), Gaps = 55/298 (18%)
Query: 35 TPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISS 94
TPLH A + + ++V LLL GA+ + ++G T AA +G ++++ L +GA ++
Sbjct: 61 TPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLLKLFLSKGADVNE 120
Query: 95 KTKVRGFYILRSGHEAVIEMLLEQGAPISSKTKVAAVLLENGASLT----------STTK 144
FY G A +E A + K K L + GA++ K
Sbjct: 121 CD----FY----GFTAFME------AAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRK 166
Query: 145 KGFTPLHLTGKYGHIKVAKLLLQK-DAPV---DFQGKAPV-------DDVTVDYLTALHV 193
G T L + GH++V K+LL + A V D G+ + DD V+ +T L
Sbjct: 167 GGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHL-- 224
Query: 194 AAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHG-ASIEATTEV 252
LLD AD N R G TPL +A +K + +V+ LL+ I T
Sbjct: 225 ------------LLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSD 272
Query: 253 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 310
+ L +A + K+ ELL K GAS + ++ A + +V++LL HGA
Sbjct: 273 GKTALLLAVELKLKKIAELLCKRGASTDCGD-----LVMTARRNYDHSLVKVLLSHGA 325
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 132/299 (44%), Gaps = 22/299 (7%)
Query: 227 ACKKNRIKVVELLLKHGASIEATTEVREPM-LHIACKKNRIKVVELLLKHGASIEATTEV 285
A + + +V+ LL+ GA++ E LH A + +R +VELLL+HGA +
Sbjct: 32 AVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKN 91
Query: 286 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 345
+A +K+++L L GA + A ++K ++ L K GA++
Sbjct: 92 GATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANV 151
Query: 346 EATTEVREPM----------LHIACKKNRIKVVELLLKH-GASIEATTEV-REPMLHIAC 393
+ +E L A +K ++V+++LL GA + A + R ++H
Sbjct: 152 NLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALL 211
Query: 394 KKNRIKV---VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG-ASIEATTE 449
+ V LLL HGA + E + L +A +K + +V+ LL+ I T
Sbjct: 212 SSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDS 271
Query: 450 VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 508
+ L +A + K+ ELL K GAS + ++ A + +V++LL HGA
Sbjct: 272 DGKTALLLAVELKLKKIAELLCKRGASTDCGD-----LVMTARRNYDHSLVKVLLSHGA 325
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 132/299 (44%), Gaps = 22/299 (7%)
Query: 260 ACKKNRIKVVELLLKHGASIEATTEVREPM-LHIACKKNRIKVVELLLKHGASIEATTEV 318
A + + +V+ LL+ GA++ E LH A + +R +VELLL+HGA +
Sbjct: 32 AVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKN 91
Query: 319 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 378
+A +K+++L L GA + A ++K ++ L K GA++
Sbjct: 92 GATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANV 151
Query: 379 EATTEVREPM----------LHIACKKNRIKVVELLLKH-GASIEATTEV-REPMLHIAC 426
+ +E L A +K ++V+++LL GA + A + R ++H
Sbjct: 152 NLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALL 211
Query: 427 KKNRIKV---VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG-ASIEATTE 482
+ V LLL HGA + E + L +A +K + +V+ LL+ I T
Sbjct: 212 SSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDS 271
Query: 483 VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 541
+ L +A + K+ ELL K GAS + ++ A + +V++LL HGA
Sbjct: 272 DGKTALLLAVELKLKKIAELLCKRGASTDCGD-----LVMTARRNYDHSLVKVLLSHGA 325
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 132/299 (44%), Gaps = 22/299 (7%)
Query: 458 ACKKNRIKVVELLLKHGASIEATTEVREPM-LHIACKKNRIKVVELLLKHGASIEATTEV 516
A + + +V+ LL+ GA++ E LH A + +R +VELLL+HGA +
Sbjct: 32 AVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKN 91
Query: 517 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 576
+A +K+++L L GA + A ++K ++ L K GA++
Sbjct: 92 GATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANV 151
Query: 577 EATTEVREPM----------LHIACKKNRIKVVELLLKH-GASIEATTEV-REPMLHIAC 624
+ +E L A +K ++V+++LL GA + A + R ++H
Sbjct: 152 NLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALL 211
Query: 625 KKNRIKV---VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG-ASIEATTE 680
+ V LLL HGA + E + L +A +K + +V+ LL+ I T
Sbjct: 212 SSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDS 271
Query: 681 VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 739
+ L +A + K+ ELL K GAS + ++ A + +V++LL HGA
Sbjct: 272 DGKTALLLAVELKLKKIAELLCKRGASTDCGD-----LVMTARRNYDHSLVKVLLSHGA 325
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 132/299 (44%), Gaps = 22/299 (7%)
Query: 491 ACKKNRIKVVELLLKHGASIEATTEVREPM-LHIACKKNRIKVVELLLKHGASIEATTEV 549
A + + +V+ LL+ GA++ E LH A + +R +VELLL+HGA +
Sbjct: 32 AVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKN 91
Query: 550 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 609
+A +K+++L L GA + A ++K ++ L K GA++
Sbjct: 92 GATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANV 151
Query: 610 EATTEVREPM----------LHIACKKNRIKVVELLLKH-GASIEATTEV-REPMLHIAC 657
+ +E L A +K ++V+++LL GA + A + R ++H
Sbjct: 152 NLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALL 211
Query: 658 KKNRIKV---VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG-ASIEATTE 713
+ V LLL HGA + E + L +A +K + +V+ LL+ I T
Sbjct: 212 SSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDS 271
Query: 714 VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 772
+ L +A + K+ ELL K GAS + ++ A + +V++LL HGA
Sbjct: 272 DGKTALLLAVELKLKKIAELLCKRGASTDCGD-----LVMTARRNYDHSLVKVLLSHGA 325
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 132/299 (44%), Gaps = 22/299 (7%)
Query: 524 ACKKNRIKVVELLLKHGASIEATTEVREPM-LHIACKKNRIKVVELLLKHGASIEATTEV 582
A + + +V+ LL+ GA++ E LH A + +R +VELLL+HGA +
Sbjct: 32 AVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKN 91
Query: 583 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 642
+A +K+++L L GA + A ++K ++ L K GA++
Sbjct: 92 GATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANV 151
Query: 643 EATTEVREPM----------LHIACKKNRIKVVELLLKH-GASIEATTEV-REPMLHIAC 690
+ +E L A +K ++V+++LL GA + A + R ++H
Sbjct: 152 NLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALL 211
Query: 691 KKNRIKV---VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG-ASIEATTE 746
+ V LLL HGA + E + L +A +K + +V+ LL+ I T
Sbjct: 212 SSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDS 271
Query: 747 VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 805
+ L +A + K+ ELL K GAS + ++ A + +V++LL HGA
Sbjct: 272 DGKTALLLAVELKLKKIAELLCKRGASTDCGD-----LVMTARRNYDHSLVKVLLSHGA 325
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 132/299 (44%), Gaps = 22/299 (7%)
Query: 557 ACKKNRIKVVELLLKHGASIEATTEVREPM-LHIACKKNRIKVVELLLKHGASIEATTEV 615
A + + +V+ LL+ GA++ E LH A + +R +VELLL+HGA +
Sbjct: 32 AVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKN 91
Query: 616 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 675
+A +K+++L L GA + A ++K ++ L K GA++
Sbjct: 92 GATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANV 151
Query: 676 EATTEVREPM----------LHIACKKNRIKVVELLLKH-GASIEATTEV-REPMLHIAC 723
+ +E L A +K ++V+++LL GA + A + R ++H
Sbjct: 152 NLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALL 211
Query: 724 KKNRIKV---VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG-ASIEATTE 779
+ V LLL HGA + E + L +A +K + +V+ LL+ I T
Sbjct: 212 SSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDS 271
Query: 780 VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 838
+ L +A + K+ ELL K GAS + ++ A + +V++LL HGA
Sbjct: 272 DGKTALLLAVELKLKKIAELLCKRGASTDCGD-----LVMTARRNYDHSLVKVLLSHGA 325
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 132/299 (44%), Gaps = 22/299 (7%)
Query: 590 ACKKNRIKVVELLLKHGASIEATTEVREPM-LHIACKKNRIKVVELLLKHGASIEATTEV 648
A + + +V+ LL+ GA++ E LH A + +R +VELLL+HGA +
Sbjct: 32 AVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKN 91
Query: 649 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 708
+A +K+++L L GA + A ++K ++ L K GA++
Sbjct: 92 GATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANV 151
Query: 709 EATTEVREPM----------LHIACKKNRIKVVELLLKH-GASIEATTEV-REPMLHIAC 756
+ +E L A +K ++V+++LL GA + A + R ++H
Sbjct: 152 NLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALL 211
Query: 757 KKNRIKV---VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG-ASIEATTE 812
+ V LLL HGA + E + L +A +K + +V+ LL+ I T
Sbjct: 212 SSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDS 271
Query: 813 VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 871
+ L +A + K+ ELL K GAS + ++ A + +V++LL HGA
Sbjct: 272 DGKTALLLAVELKLKKIAELLCKRGASTDCGD-----LVMTARRNYDHSLVKVLLSHGA 325
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 132/299 (44%), Gaps = 22/299 (7%)
Query: 623 ACKKNRIKVVELLLKHGASIEATTEVREPM-LHIACKKNRIKVVELLLKHGASIEATTEV 681
A + + +V+ LL+ GA++ E LH A + +R +VELLL+HGA +
Sbjct: 32 AVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKN 91
Query: 682 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 741
+A +K+++L L GA + A ++K ++ L K GA++
Sbjct: 92 GATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANV 151
Query: 742 EATTEVREPM----------LHIACKKNRIKVVELLLKH-GASIEATTEV-REPMLHIAC 789
+ +E L A +K ++V+++LL GA + A + R ++H
Sbjct: 152 NLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALL 211
Query: 790 KKNRIKV---VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG-ASIEATTE 845
+ V LLL HGA + E + L +A +K + +V+ LL+ I T
Sbjct: 212 SSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDS 271
Query: 846 VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 904
+ L +A + K+ ELL K GAS + ++ A + +V++LL HGA
Sbjct: 272 DGKTALLLAVELKLKKIAELLCKRGASTDCGD-----LVMTARRNYDHSLVKVLLSHGA 325
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 132/299 (44%), Gaps = 22/299 (7%)
Query: 656 ACKKNRIKVVELLLKHGASIEATTEVREPM-LHIACKKNRIKVVELLLKHGASIEATTEV 714
A + + +V+ LL+ GA++ E LH A + +R +VELLL+HGA +
Sbjct: 32 AVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKN 91
Query: 715 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 774
+A +K+++L L GA + A ++K ++ L K GA++
Sbjct: 92 GATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANV 151
Query: 775 EATTEVREPM----------LHIACKKNRIKVVELLLKH-GASIEATTEV-REPMLHIAC 822
+ +E L A +K ++V+++LL GA + A + R ++H
Sbjct: 152 NLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALL 211
Query: 823 KKNRIKV---VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG-ASIEATTE 878
+ V LLL HGA + E + L +A +K + +V+ LL+ I T
Sbjct: 212 SSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDS 271
Query: 879 VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 937
+ L +A + K+ ELL K GAS + ++ A + +V++LL HGA
Sbjct: 272 DGKTALLLAVELKLKKIAELLCKRGASTDCGD-----LVMTARRNYDHSLVKVLLSHGA 325
Score = 63.5 bits (153), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 119/268 (44%), Gaps = 17/268 (6%)
Query: 689 ACKKNRIKVVELLLKHGASIEATTEVREPM-LHIACKKNRIKVVELLLKHGASIEATTEV 747
A + + +V+ LL+ GA++ E LH A + +R +VELLL+HGA +
Sbjct: 32 AVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKN 91
Query: 748 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 807
+A +K+++L L GA + A ++K ++ L K GA++
Sbjct: 92 GATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANV 151
Query: 808 EATTEVREPM----------LHIACKKNRIKVVELLLKH-GASIEATTEV-REPMLHIAC 855
+ +E L A +K ++V+++LL GA + A + R ++H
Sbjct: 152 NLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALL 211
Query: 856 KKNRIKV---VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG-ASIEATTE 911
+ V LLL HGA + E + L +A +K + +V+ LL+ I T
Sbjct: 212 SSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDS 271
Query: 912 VREPMLHIACKKNRIKVVELLLKHGASS 939
+ L +A + K+ ELL K GAS+
Sbjct: 272 DGKTALLLAVELKLKKIAELLCKRGAST 299
Score = 63.5 bits (153), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 60/126 (47%), Gaps = 3/126 (2%)
Query: 1265 SAQQGHSTIVALLLDRGASPNATNK--GFTPLHHSAQQGHSTIVALLLDRGASPNATNKT 1322
+ Q +V LL+ GA+ N + G+TPLH++ Q IV LLL GA P K
Sbjct: 32 AVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADP-VLRKK 90
Query: 1323 RGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGAS 1382
G TP +A G + + +L L + A+V+ GFT +A G + L RGA+
Sbjct: 91 NGATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGAN 150
Query: 1383 PNATNK 1388
N K
Sbjct: 151 VNLRRK 156
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 109/248 (43%), Gaps = 46/248 (18%)
Query: 31 QHNITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGA 90
++ TP +AA G ++ L LS+GA+++ G TA AA G ++ L ++GA
Sbjct: 90 KNGATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGA 149
Query: 91 PISSKTKVR---------GFYIL----RSGHEAVIEMLL-EQGAPI-------------- 122
++ + K + G L GH V+++LL E GA +
Sbjct: 150 NVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHA 209
Query: 123 ---SSKTKVAAV---LLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQG 176
S + V A+ LL++GA + ++G TPL L + H+ + + LL+ Q
Sbjct: 210 LLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLE-------QE 262
Query: 177 KAPVDDVTVDYLTALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVV 236
++D D TAL +A ++A+ L + A + L + A + +V
Sbjct: 263 HIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGDL-----VMTARRNYDHSLV 317
Query: 237 ELLLKHGA 244
++LL HGA
Sbjct: 318 KVLLSHGA 325
>pdb|2Y1L|E Chain E, Caspase-8 In Complex With Darpin-8.4
pdb|2Y1L|F Chain F, Caspase-8 In Complex With Darpin-8.4
Length = 169
Score = 94.4 bits (233), Expect = 4e-19, Method: Composition-based stats.
Identities = 58/170 (34%), Positives = 92/170 (54%), Gaps = 13/170 (7%)
Query: 1022 DLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAP 1081
DL L AA+ G+++ +L+ NGA + + G+TPLHL GH+++ ++LL+ A
Sbjct: 13 DLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGAD 72
Query: 1082 VDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHL 1141
V+ G+TPL +A+ + H ++I LL+ GA NA + G TPLHL
Sbjct: 73 VNAVDHAGMTPLRLAALFGH-------------LEIVEVLLKNGADVNANDMEGHTPLHL 119
Query: 1142 SASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNN 1191
+A GH ++ +LL++GADV+ K G T + +AE+L K N
Sbjct: 120 AAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169
Score = 90.9 bits (224), Expect = 4e-18, Method: Composition-based stats.
Identities = 53/158 (33%), Positives = 85/158 (53%), Gaps = 13/158 (8%)
Query: 997 ASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKG 1056
A+R G D V +L+ +GA V++ +T LH+AA G E+ VLL+NGA + + G
Sbjct: 21 AARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAG 80
Query: 1057 FTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMD 1116
TPL L +GH+++ ++LL+ A V+ G TPLH+A+ + H ++
Sbjct: 81 MTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGH-------------LE 127
Query: 1117 IATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAML 1154
I LL+ GA NA+ G T +S G+ D++ +L
Sbjct: 128 IVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 90.5 bits (223), Expect = 6e-18, Method: Composition-based stats.
Identities = 49/128 (38%), Positives = 72/128 (56%)
Query: 1106 LLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAA 1165
LL + D L+ GA NAE +G+TPLHL+A GH ++ +LL++GADV+
Sbjct: 18 LLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVD 77
Query: 1166 KNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSA 1225
G+TPL L A + + E+LLKN A V+ +G TPLH+A +G + + +LL A
Sbjct: 78 HAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGA 137
Query: 1226 NVTVPKNF 1233
+V F
Sbjct: 138 DVNAQDKF 145
Score = 84.7 bits (208), Expect = 3e-16, Method: Composition-based stats.
Identities = 52/128 (40%), Positives = 72/128 (56%), Gaps = 2/128 (1%)
Query: 1262 LHHSAQQGHSTIVALLLDRGASPNATN-KGFTPLHHSAQQGHSTIVALLLDRGASPNATN 1320
L +A+ G V +L+ GA NA + G+TPLH +A GH IV +LL GA NA +
Sbjct: 18 LLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVD 77
Query: 1321 KTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRG 1380
G TPL +A +G + + +LL A+V+ +G TPLH +A GH IV +LL G
Sbjct: 78 HA-GMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNG 136
Query: 1381 ASPNATNK 1388
A NA +K
Sbjct: 137 ADVNAQDK 144
Score = 81.3 bits (199), Expect = 3e-15, Method: Composition-based stats.
Identities = 53/148 (35%), Positives = 78/148 (52%), Gaps = 13/148 (8%)
Query: 1073 KLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAES 1132
++L+ A V+ + +G TPLH+A+ H ++I LL+ GA NA
Sbjct: 31 RILMANGADVNAEDASGWTPLHLAAFNGH-------------LEIVEVLLKNGADVNAVD 77
Query: 1133 VAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNA 1192
AG TPL L+A GH ++ +LL++GADV+ G TPLHL A + + E+LLKN A
Sbjct: 78 HAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGA 137
Query: 1193 QVDTPTKKGFTPLHIACHYGQISMARLL 1220
V+ K G T I+ G +A +L
Sbjct: 138 DVNAQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 80.5 bits (197), Expect = 7e-15, Method: Composition-based stats.
Identities = 48/146 (32%), Positives = 78/146 (53%), Gaps = 12/146 (8%)
Query: 131 VLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKAPVDDVTVDY--L 188
+L+ NGA + + G+TPLHL GH+++ ++LL+ A V+ VD+ +
Sbjct: 32 ILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVN----------AVDHAGM 81
Query: 189 TALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEA 248
T L +AA GH + + LL AD NA + G TPLH+A +++VE+LLK+GA + A
Sbjct: 82 TPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNA 141
Query: 249 TTEVREPMLHIACKKNRIKVVELLLK 274
+ + I+ + E+L K
Sbjct: 142 QDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 80.1 bits (196), Expect = 9e-15, Method: Composition-based stats.
Identities = 43/117 (36%), Positives = 74/117 (63%)
Query: 992 TPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTS 1051
TPLH+A+ G+++IV +LL++GA V++ T L +AA G E+ VLL+NGA + +
Sbjct: 49 TPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNA 108
Query: 1052 TTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLL 1108
+G TPLHL +GH+++ ++LL+ A V+ Q K G T ++ ++++A +L
Sbjct: 109 NDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 77.8 bits (190), Expect = 4e-14, Method: Composition-based stats.
Identities = 47/147 (31%), Positives = 77/147 (52%)
Query: 194 AAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVR 253
AA G + L+ AD NA +G+TPLH+A +++VE+LLK+GA + A
Sbjct: 21 AARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAG 80
Query: 254 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 313
L +A +++VE+LLK+GA + A LH+A +++VE+LLK+GA +
Sbjct: 81 MTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVN 140
Query: 314 ATTEVREPMLHIACKKNRIKVVELLLK 340
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 77.8 bits (190), Expect = 4e-14, Method: Composition-based stats.
Identities = 56/170 (32%), Positives = 79/170 (46%), Gaps = 27/170 (15%)
Query: 1142 SASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKG 1201
+A G D +L+ +GADV+ +G TPLHL A + + E+LLKN A V+ G
Sbjct: 21 AARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAG 80
Query: 1202 FTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRXXXXXXXXXXXXXXYTNTTD-QGFT 1260
TPL +A +G + + +LL A+V N D +G T
Sbjct: 81 MTPLRLAALFGHLEIVEVLLKNGADV-------------------------NANDMEGHT 115
Query: 1261 PLHHSAQQGHSTIVALLLDRGASPNATNK-GFTPLHHSAQQGHSTIVALL 1309
PLH +A GH IV +LL GA NA +K G T S G+ + +L
Sbjct: 116 PLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 76.6 bits (187), Expect = 9e-14, Method: Composition-based stats.
Identities = 48/120 (40%), Positives = 64/120 (53%), Gaps = 2/120 (1%)
Query: 1258 GFTPLHHSAQQGHSTIVALLLDRGASPNATNK-GFTPLHHSAQQGHSTIVALLLDRGASP 1316
G+TPLH +A GH IV +LL GA NA + G TPL +A GH IV +LL GA
Sbjct: 47 GWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADV 106
Query: 1317 NATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALL 1376
NA N G TPLH+A +G + + +LL A+V+ G T S G+ + +L
Sbjct: 107 NA-NDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 75.1 bits (183), Expect = 3e-13, Method: Composition-based stats.
Identities = 45/149 (30%), Positives = 83/149 (55%), Gaps = 16/149 (10%)
Query: 40 AAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISSKTKVR 99
AA+ G+ + V +L++ GA+++ + G T LH AA +GH ++E+LL+ GA +++
Sbjct: 21 AARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNA----- 75
Query: 100 GFYILRSGHEAVIEMLLEQGAPISSKTKVAAVLLENGASLTSTTKKGFTPLHLTGKYGHI 159
H + + L A + ++ VLL+NGA + + +G TPLHL +GH+
Sbjct: 76 ------VDHAGMTPLRL---AALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHL 126
Query: 160 KVAKLLLQKDAPVDFQGK--APVDDVTVD 186
++ ++LL+ A V+ Q K D+++D
Sbjct: 127 EIVEVLLKNGADVNAQDKFGKTAFDISID 155
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/119 (34%), Positives = 63/119 (52%)
Query: 189 TALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEA 248
T LH+AA GH + + LL AD NA G TPL +A +++VE+LLK+GA + A
Sbjct: 49 TPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNA 108
Query: 249 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 307
LH+A +++VE+LLK+GA + A + + I+ + E+L K
Sbjct: 109 NDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 67.4 bits (163), Expect = 6e-11, Method: Composition-based stats.
Identities = 43/147 (29%), Positives = 74/147 (50%)
Query: 227 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 286
A + R V +L+ +GA + A LH+A +++VE+LLK+GA + A
Sbjct: 21 AARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAG 80
Query: 287 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 346
L +A +++VE+LLK+GA + A LH+A +++VE+LLK+GA +
Sbjct: 81 MTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVN 140
Query: 347 ATTEVREPMLHIACKKNRIKVVELLLK 373
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 67.4 bits (163), Expect = 6e-11, Method: Composition-based stats.
Identities = 43/147 (29%), Positives = 74/147 (50%)
Query: 260 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 319
A + R V +L+ +GA + A LH+A +++VE+LLK+GA + A
Sbjct: 21 AARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAG 80
Query: 320 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 379
L +A +++VE+LLK+GA + A LH+A +++VE+LLK+GA +
Sbjct: 81 MTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVN 140
Query: 380 ATTEVREPMLHIACKKNRIKVVELLLK 406
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 67.4 bits (163), Expect = 6e-11, Method: Composition-based stats.
Identities = 43/147 (29%), Positives = 74/147 (50%)
Query: 293 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 352
A + R V +L+ +GA + A LH+A +++VE+LLK+GA + A
Sbjct: 21 AARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAG 80
Query: 353 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 412
L +A +++VE+LLK+GA + A LH+A +++VE+LLK+GA +
Sbjct: 81 MTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVN 140
Query: 413 ATTEVREPMLHIACKKNRIKVVELLLK 439
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 67.4 bits (163), Expect = 6e-11, Method: Composition-based stats.
Identities = 43/147 (29%), Positives = 74/147 (50%)
Query: 326 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 385
A + R V +L+ +GA + A LH+A +++VE+LLK+GA + A
Sbjct: 21 AARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAG 80
Query: 386 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 445
L +A +++VE+LLK+GA + A LH+A +++VE+LLK+GA +
Sbjct: 81 MTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVN 140
Query: 446 ATTEVREPMLHIACKKNRIKVVELLLK 472
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 67.4 bits (163), Expect = 6e-11, Method: Composition-based stats.
Identities = 43/147 (29%), Positives = 74/147 (50%)
Query: 359 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 418
A + R V +L+ +GA + A LH+A +++VE+LLK+GA + A
Sbjct: 21 AARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAG 80
Query: 419 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 478
L +A +++VE+LLK+GA + A LH+A +++VE+LLK+GA +
Sbjct: 81 MTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVN 140
Query: 479 ATTEVREPMLHIACKKNRIKVVELLLK 505
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 67.4 bits (163), Expect = 6e-11, Method: Composition-based stats.
Identities = 43/147 (29%), Positives = 74/147 (50%)
Query: 392 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 451
A + R V +L+ +GA + A LH+A +++VE+LLK+GA + A
Sbjct: 21 AARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAG 80
Query: 452 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 511
L +A +++VE+LLK+GA + A LH+A +++VE+LLK+GA +
Sbjct: 81 MTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVN 140
Query: 512 ATTEVREPMLHIACKKNRIKVVELLLK 538
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 67.4 bits (163), Expect = 6e-11, Method: Composition-based stats.
Identities = 43/147 (29%), Positives = 74/147 (50%)
Query: 425 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 484
A + R V +L+ +GA + A LH+A +++VE+LLK+GA + A
Sbjct: 21 AARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAG 80
Query: 485 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 544
L +A +++VE+LLK+GA + A LH+A +++VE+LLK+GA +
Sbjct: 81 MTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVN 140
Query: 545 ATTEVREPMLHIACKKNRIKVVELLLK 571
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 67.4 bits (163), Expect = 6e-11, Method: Composition-based stats.
Identities = 43/147 (29%), Positives = 74/147 (50%)
Query: 458 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 517
A + R V +L+ +GA + A LH+A +++VE+LLK+GA + A
Sbjct: 21 AARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAG 80
Query: 518 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 577
L +A +++VE+LLK+GA + A LH+A +++VE+LLK+GA +
Sbjct: 81 MTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVN 140
Query: 578 ATTEVREPMLHIACKKNRIKVVELLLK 604
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 67.4 bits (163), Expect = 6e-11, Method: Composition-based stats.
Identities = 43/147 (29%), Positives = 74/147 (50%)
Query: 491 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 550
A + R V +L+ +GA + A LH+A +++VE+LLK+GA + A
Sbjct: 21 AARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAG 80
Query: 551 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 610
L +A +++VE+LLK+GA + A LH+A +++VE+LLK+GA +
Sbjct: 81 MTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVN 140
Query: 611 ATTEVREPMLHIACKKNRIKVVELLLK 637
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 67.4 bits (163), Expect = 6e-11, Method: Composition-based stats.
Identities = 43/147 (29%), Positives = 74/147 (50%)
Query: 524 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 583
A + R V +L+ +GA + A LH+A +++VE+LLK+GA + A
Sbjct: 21 AARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAG 80
Query: 584 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 643
L +A +++VE+LLK+GA + A LH+A +++VE+LLK+GA +
Sbjct: 81 MTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVN 140
Query: 644 ATTEVREPMLHIACKKNRIKVVELLLK 670
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 67.4 bits (163), Expect = 6e-11, Method: Composition-based stats.
Identities = 43/147 (29%), Positives = 74/147 (50%)
Query: 557 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 616
A + R V +L+ +GA + A LH+A +++VE+LLK+GA + A
Sbjct: 21 AARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAG 80
Query: 617 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 676
L +A +++VE+LLK+GA + A LH+A +++VE+LLK+GA +
Sbjct: 81 MTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVN 140
Query: 677 ATTEVREPMLHIACKKNRIKVVELLLK 703
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 67.4 bits (163), Expect = 6e-11, Method: Composition-based stats.
Identities = 43/147 (29%), Positives = 74/147 (50%)
Query: 590 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 649
A + R V +L+ +GA + A LH+A +++VE+LLK+GA + A
Sbjct: 21 AARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAG 80
Query: 650 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 709
L +A +++VE+LLK+GA + A LH+A +++VE+LLK+GA +
Sbjct: 81 MTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVN 140
Query: 710 ATTEVREPMLHIACKKNRIKVVELLLK 736
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 67.4 bits (163), Expect = 6e-11, Method: Composition-based stats.
Identities = 43/147 (29%), Positives = 74/147 (50%)
Query: 623 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 682
A + R V +L+ +GA + A LH+A +++VE+LLK+GA + A
Sbjct: 21 AARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAG 80
Query: 683 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 742
L +A +++VE+LLK+GA + A LH+A +++VE+LLK+GA +
Sbjct: 81 MTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVN 140
Query: 743 ATTEVREPMLHIACKKNRIKVVELLLK 769
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 67.4 bits (163), Expect = 6e-11, Method: Composition-based stats.
Identities = 43/147 (29%), Positives = 74/147 (50%)
Query: 656 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 715
A + R V +L+ +GA + A LH+A +++VE+LLK+GA + A
Sbjct: 21 AARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAG 80
Query: 716 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 775
L +A +++VE+LLK+GA + A LH+A +++VE+LLK+GA +
Sbjct: 81 MTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVN 140
Query: 776 ATTEVREPMLHIACKKNRIKVVELLLK 802
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 67.4 bits (163), Expect = 6e-11, Method: Composition-based stats.
Identities = 43/147 (29%), Positives = 74/147 (50%)
Query: 689 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 748
A + R V +L+ +GA + A LH+A +++VE+LLK+GA + A
Sbjct: 21 AARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAG 80
Query: 749 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 808
L +A +++VE+LLK+GA + A LH+A +++VE+LLK+GA +
Sbjct: 81 MTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVN 140
Query: 809 ATTEVREPMLHIACKKNRIKVVELLLK 835
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 67.4 bits (163), Expect = 6e-11, Method: Composition-based stats.
Identities = 43/147 (29%), Positives = 74/147 (50%)
Query: 722 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 781
A + R V +L+ +GA + A LH+A +++VE+LLK+GA + A
Sbjct: 21 AARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAG 80
Query: 782 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 841
L +A +++VE+LLK+GA + A LH+A +++VE+LLK+GA +
Sbjct: 81 MTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVN 140
Query: 842 ATTEVREPMLHIACKKNRIKVVELLLK 868
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 67.4 bits (163), Expect = 6e-11, Method: Composition-based stats.
Identities = 43/147 (29%), Positives = 74/147 (50%)
Query: 755 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 814
A + R V +L+ +GA + A LH+A +++VE+LLK+GA + A
Sbjct: 21 AARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAG 80
Query: 815 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 874
L +A +++VE+LLK+GA + A LH+A +++VE+LLK+GA +
Sbjct: 81 MTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVN 140
Query: 875 ATTEVREPMLHIACKKNRIKVVELLLK 901
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 67.4 bits (163), Expect = 6e-11, Method: Composition-based stats.
Identities = 43/147 (29%), Positives = 74/147 (50%)
Query: 788 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 847
A + R V +L+ +GA + A LH+A +++VE+LLK+GA + A
Sbjct: 21 AARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAG 80
Query: 848 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 907
L +A +++VE+LLK+GA + A LH+A +++VE+LLK+GA +
Sbjct: 81 MTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVN 140
Query: 908 ATTEVREPMLHIACKKNRIKVVELLLK 934
A + + I+ + E+L K
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQK 167
Score = 64.3 bits (155), Expect = 5e-10, Method: Composition-based stats.
Identities = 41/146 (28%), Positives = 74/146 (50%)
Query: 821 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 880
A + R V +L+ +GA + A LH+A +++VE+LLK+GA + A
Sbjct: 21 AARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAG 80
Query: 881 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASSH 940
L +A +++VE+LLK+GA + A LH+A +++VE+LLK+GA +
Sbjct: 81 MTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVN 140
Query: 941 VVSCYSNVKVHVSLNKIQDVSSSILR 966
+ +S++ + + IL+
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQ 166
Score = 63.9 bits (154), Expect = 6e-10, Method: Composition-based stats.
Identities = 51/189 (26%), Positives = 87/189 (46%), Gaps = 44/189 (23%)
Query: 854 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 913
A + R V +L+ +GA + A LH+A +++VE+LLK+GA + A
Sbjct: 21 AARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAG 80
Query: 914 EPMLHIACKKNRIKVVELLLKHGASSHVVSCYSNVKVHVSLNKIQDVSSSILRLATCDVL 973
L +A +++VE+LLK+GA DV+++ +
Sbjct: 81 MTPLRLAALFGHLEIVEVLLKNGA---------------------DVNANDM-------- 111
Query: 974 PQCETRLNFSNLRVREQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKE 1033
E TPLH+A+ G+++IV +LL++GA V++ K TA I+
Sbjct: 112 ---------------EGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDN 156
Query: 1034 GQEEVAAVL 1042
G E++A +L
Sbjct: 157 GNEDLAEIL 165
Score = 55.8 bits (133), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 5/97 (5%)
Query: 35 TPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISS 94
TPLH+AA G +V +LL GA+++ G+T L AA GH ++E+LL+ GA +++
Sbjct: 49 TPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNA 108
Query: 95 KTKVRGFYILR----SGHEAVIEMLLEQGAPISSKTK 127
+ G L GH ++E+LL+ GA ++++ K
Sbjct: 109 -NDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDK 144
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/85 (36%), Positives = 53/85 (62%), Gaps = 3/85 (3%)
Query: 34 ITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPIS 93
+TPL +AA +G +V +LL GA+++ +G T LH AA GH ++E+LL+ GA ++
Sbjct: 81 MTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVN 140
Query: 94 SKTKV--RGFYI-LRSGHEAVIEML 115
++ K F I + +G+E + E+L
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEIL 165
>pdb|4B93|B Chain B, Complex Of Vamp7 Cytoplasmic Domain With 2nd Ankyrin
Repeat Domain Of Varp
Length = 269
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 88/171 (51%), Gaps = 10/171 (5%)
Query: 135 NGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKAPVDDVTVDYLTALHVA 194
+G + T++ G +PLH+ +G + LLL+ A + D LH+A
Sbjct: 75 SGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGAR--------NADQAVPLHLA 126
Query: 195 AHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVRE 254
GH +V K LLD A PN + L+G TPL AC ++V LLL+HGASI A+
Sbjct: 127 CQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGN 186
Query: 255 PMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 305
LH A + + VVELLL HGAS++ + + + C + K++ELL
Sbjct: 187 TALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTA--VDCAEQNSKIMELL 235
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 74/136 (54%), Gaps = 2/136 (1%)
Query: 1254 TTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATNKG-FTPLHHSAQQGHSTIVALLLDR 1312
T+ G +PLH +A G + ++ LLL GA+ A N PLH + QQGH +V LLD
Sbjct: 82 TSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDS 141
Query: 1313 GASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTI 1372
A PN + + G TPL AC G + LLL A+++ + ++G T LH + + H +
Sbjct: 142 NAKPNKKDLS-GNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFV 200
Query: 1373 VALLLDRGASPNATNK 1388
V LLL GAS NK
Sbjct: 201 VELLLLHGASVQVLNK 216
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 82/158 (51%), Gaps = 2/158 (1%)
Query: 214 NARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLL 273
N + +G +PLH+A R ++ LLLKHGA+ A + LH+AC++ +VV+ LL
Sbjct: 80 NVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLL 139
Query: 274 KHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIK 333
A L AC ++V LLL+HGASI A+ LH A + +
Sbjct: 140 DSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVF 199
Query: 334 VVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 371
VVELLL HGAS++ + + + C + K++ELL
Sbjct: 200 VVELLLLHGASVQVLNKRQRTA--VDCAEQNSKIMELL 235
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 81/162 (50%), Gaps = 2/162 (1%)
Query: 243 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 302
G + T++ LH+A R ++ LLLKHGA+ A + LH+AC++ +VV
Sbjct: 76 GLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVV 135
Query: 303 ELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKK 362
+ LL A L AC ++V LLL+HGASI A+ LH A +
Sbjct: 136 KCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIE 195
Query: 363 NRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 404
+ VVELLL HGAS++ + + + C + K++ELL
Sbjct: 196 KHVFVVELLLLHGASVQVLNKRQRTA--VDCAEQNSKIMELL 235
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 81/162 (50%), Gaps = 2/162 (1%)
Query: 276 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 335
G + T++ LH+A R ++ LLLKHGA+ A + LH+AC++ +VV
Sbjct: 76 GLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVV 135
Query: 336 ELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKK 395
+ LL A L AC ++V LLL+HGASI A+ LH A +
Sbjct: 136 KCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIE 195
Query: 396 NRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 437
+ VVELLL HGAS++ + + + C + K++ELL
Sbjct: 196 KHVFVVELLLLHGASVQVLNKRQRTA--VDCAEQNSKIMELL 235
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 81/162 (50%), Gaps = 2/162 (1%)
Query: 309 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 368
G + T++ LH+A R ++ LLLKHGA+ A + LH+AC++ +VV
Sbjct: 76 GLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVV 135
Query: 369 ELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKK 428
+ LL A L AC ++V LLL+HGASI A+ LH A +
Sbjct: 136 KCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIE 195
Query: 429 NRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 470
+ VVELLL HGAS++ + + + C + K++ELL
Sbjct: 196 KHVFVVELLLLHGASVQVLNKRQRTA--VDCAEQNSKIMELL 235
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 81/162 (50%), Gaps = 2/162 (1%)
Query: 342 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 401
G + T++ LH+A R ++ LLLKHGA+ A + LH+AC++ +VV
Sbjct: 76 GLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVV 135
Query: 402 ELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKK 461
+ LL A L AC ++V LLL+HGASI A+ LH A +
Sbjct: 136 KCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIE 195
Query: 462 NRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 503
+ VVELLL HGAS++ + + + C + K++ELL
Sbjct: 196 KHVFVVELLLLHGASVQVLNKRQRTA--VDCAEQNSKIMELL 235
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 81/162 (50%), Gaps = 2/162 (1%)
Query: 375 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 434
G + T++ LH+A R ++ LLLKHGA+ A + LH+AC++ +VV
Sbjct: 76 GLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVV 135
Query: 435 ELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKK 494
+ LL A L AC ++V LLL+HGASI A+ LH A +
Sbjct: 136 KCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIE 195
Query: 495 NRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 536
+ VVELLL HGAS++ + + + C + K++ELL
Sbjct: 196 KHVFVVELLLLHGASVQVLNKRQRTA--VDCAEQNSKIMELL 235
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 81/162 (50%), Gaps = 2/162 (1%)
Query: 408 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 467
G + T++ LH+A R ++ LLLKHGA+ A + LH+AC++ +VV
Sbjct: 76 GLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVV 135
Query: 468 ELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKK 527
+ LL A L AC ++V LLL+HGASI A+ LH A +
Sbjct: 136 KCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIE 195
Query: 528 NRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 569
+ VVELLL HGAS++ + + + C + K++ELL
Sbjct: 196 KHVFVVELLLLHGASVQVLNKRQRTA--VDCAEQNSKIMELL 235
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 81/162 (50%), Gaps = 2/162 (1%)
Query: 441 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 500
G + T++ LH+A R ++ LLLKHGA+ A + LH+AC++ +VV
Sbjct: 76 GLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVV 135
Query: 501 ELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKK 560
+ LL A L AC ++V LLL+HGASI A+ LH A +
Sbjct: 136 KCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIE 195
Query: 561 NRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 602
+ VVELLL HGAS++ + + + C + K++ELL
Sbjct: 196 KHVFVVELLLLHGASVQVLNKRQRTA--VDCAEQNSKIMELL 235
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 81/162 (50%), Gaps = 2/162 (1%)
Query: 474 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 533
G + T++ LH+A R ++ LLLKHGA+ A + LH+AC++ +VV
Sbjct: 76 GLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVV 135
Query: 534 ELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKK 593
+ LL A L AC ++V LLL+HGASI A+ LH A +
Sbjct: 136 KCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIE 195
Query: 594 NRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 635
+ VVELLL HGAS++ + + + C + K++ELL
Sbjct: 196 KHVFVVELLLLHGASVQVLNKRQRTA--VDCAEQNSKIMELL 235
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 81/162 (50%), Gaps = 2/162 (1%)
Query: 507 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 566
G + T++ LH+A R ++ LLLKHGA+ A + LH+AC++ +VV
Sbjct: 76 GLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVV 135
Query: 567 ELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKK 626
+ LL A L AC ++V LLL+HGASI A+ LH A +
Sbjct: 136 KCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIE 195
Query: 627 NRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 668
+ VVELLL HGAS++ + + + C + K++ELL
Sbjct: 196 KHVFVVELLLLHGASVQVLNKRQRTA--VDCAEQNSKIMELL 235
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 81/162 (50%), Gaps = 2/162 (1%)
Query: 540 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 599
G + T++ LH+A R ++ LLLKHGA+ A + LH+AC++ +VV
Sbjct: 76 GLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVV 135
Query: 600 ELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKK 659
+ LL A L AC ++V LLL+HGASI A+ LH A +
Sbjct: 136 KCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIE 195
Query: 660 NRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 701
+ VVELLL HGAS++ + + + C + K++ELL
Sbjct: 196 KHVFVVELLLLHGASVQVLNKRQRTA--VDCAEQNSKIMELL 235
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 81/162 (50%), Gaps = 2/162 (1%)
Query: 573 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 632
G + T++ LH+A R ++ LLLKHGA+ A + LH+AC++ +VV
Sbjct: 76 GLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVV 135
Query: 633 ELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKK 692
+ LL A L AC ++V LLL+HGASI A+ LH A +
Sbjct: 136 KCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIE 195
Query: 693 NRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 734
+ VVELLL HGAS++ + + + C + K++ELL
Sbjct: 196 KHVFVVELLLLHGASVQVLNKRQRTA--VDCAEQNSKIMELL 235
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 81/162 (50%), Gaps = 2/162 (1%)
Query: 606 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 665
G + T++ LH+A R ++ LLLKHGA+ A + LH+AC++ +VV
Sbjct: 76 GLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVV 135
Query: 666 ELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKK 725
+ LL A L AC ++V LLL+HGASI A+ LH A +
Sbjct: 136 KCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIE 195
Query: 726 NRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 767
+ VVELLL HGAS++ + + + C + K++ELL
Sbjct: 196 KHVFVVELLLLHGASVQVLNKRQRTA--VDCAEQNSKIMELL 235
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 81/162 (50%), Gaps = 2/162 (1%)
Query: 639 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 698
G + T++ LH+A R ++ LLLKHGA+ A + LH+AC++ +VV
Sbjct: 76 GLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVV 135
Query: 699 ELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKK 758
+ LL A L AC ++V LLL+HGASI A+ LH A +
Sbjct: 136 KCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIE 195
Query: 759 NRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 800
+ VVELLL HGAS++ + + + C + K++ELL
Sbjct: 196 KHVFVVELLLLHGASVQVLNKRQRTA--VDCAEQNSKIMELL 235
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 81/162 (50%), Gaps = 2/162 (1%)
Query: 672 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 731
G + T++ LH+A R ++ LLLKHGA+ A + LH+AC++ +VV
Sbjct: 76 GLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVV 135
Query: 732 ELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKK 791
+ LL A L AC ++V LLL+HGASI A+ LH A +
Sbjct: 136 KCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIE 195
Query: 792 NRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 833
+ VVELLL HGAS++ + + + C + K++ELL
Sbjct: 196 KHVFVVELLLLHGASVQVLNKRQRTA--VDCAEQNSKIMELL 235
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 81/162 (50%), Gaps = 2/162 (1%)
Query: 705 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 764
G + T++ LH+A R ++ LLLKHGA+ A + LH+AC++ +VV
Sbjct: 76 GLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVV 135
Query: 765 ELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKK 824
+ LL A L AC ++V LLL+HGASI A+ LH A +
Sbjct: 136 KCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIE 195
Query: 825 NRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 866
+ VVELLL HGAS++ + + + C + K++ELL
Sbjct: 196 KHVFVVELLLLHGASVQVLNKRQRTA--VDCAEQNSKIMELL 235
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 81/162 (50%), Gaps = 2/162 (1%)
Query: 738 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 797
G + T++ LH+A R ++ LLLKHGA+ A + LH+AC++ +VV
Sbjct: 76 GLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVV 135
Query: 798 ELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKK 857
+ LL A L AC ++V LLL+HGASI A+ LH A +
Sbjct: 136 KCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIE 195
Query: 858 NRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 899
+ VVELLL HGAS++ + + + C + K++ELL
Sbjct: 196 KHVFVVELLLLHGASVQVLNKRQRTA--VDCAEQNSKIMELL 235
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 81/162 (50%), Gaps = 2/162 (1%)
Query: 771 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 830
G + T++ LH+A R ++ LLLKHGA+ A + LH+AC++ +VV
Sbjct: 76 GLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVV 135
Query: 831 ELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKK 890
+ LL A L AC ++V LLL+HGASI A+ LH A +
Sbjct: 136 KCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIE 195
Query: 891 NRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 932
+ VVELLL HGAS++ + + + C + K++ELL
Sbjct: 196 KHVFVVELLLLHGASVQVLNKRQRTA--VDCAEQNSKIMELL 235
Score = 77.4 bits (189), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 79/164 (48%), Gaps = 13/164 (7%)
Query: 1045 NGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNV 1104
+G + T++ G +PLH+ +G + LLL+ A + + PLH+A H
Sbjct: 75 SGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGH--- 131
Query: 1105 ALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHA 1164
+ LL+ AKPN + ++G TPL + S GH ++ A+LL+HGA ++ +
Sbjct: 132 ----------FQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINAS 181
Query: 1165 AKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIA 1208
G T LH E V V ELLL + A V K+ T + A
Sbjct: 182 NNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCA 225
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 80/159 (50%), Gaps = 2/159 (1%)
Query: 180 VDDVTVDYLTALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELL 239
V+ + D + LHVAA G A + LL A+ AR + PLH+AC++ +VV+ L
Sbjct: 79 VNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCL 138
Query: 240 LKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRI 299
L A L AC ++V LLL+HGASI A+ LH A + +
Sbjct: 139 LDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHV 198
Query: 300 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 338
VVELLL HGAS++ + + + C + K++ELL
Sbjct: 199 FVVELLLLHGASVQVLNKRQRTA--VDCAEQNSKIMELL 235
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 85/178 (47%), Gaps = 7/178 (3%)
Query: 804 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 863
G + T++ LH+A R ++ LLLKHGA+ A + LH+AC++ +VV
Sbjct: 76 GLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVV 135
Query: 864 ELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKK 923
+ LL A L AC ++V LLL+HGASI A+ LH A +
Sbjct: 136 KCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIE 195
Query: 924 NRIKVVELLLKHGASSHVVSCYSNVKVHVSLNKIQDVSSSILRLATCDVLPQCETRLN 981
+ VVELLL HGAS V++ V + + +S I+ L V+P C L+
Sbjct: 196 KHVFVVELLLLHGASVQVLNKRQRTAVDCA-----EQNSKIMELLQ--VVPSCVASLD 246
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 68/134 (50%)
Query: 984 NLRVREQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLL 1043
N+ ++ +PLH+A+ G D++ LLL+HGA + D LH+A ++G +V LL
Sbjct: 80 NVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLL 139
Query: 1044 ENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQN 1103
++ A G TPL GH ++ LLLQ A ++ G T LH A H
Sbjct: 140 DSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVF 199
Query: 1104 VALLLLEKGASMDI 1117
V LLL GAS+ +
Sbjct: 200 VVELLLLHGASVQV 213
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 82/169 (48%), Gaps = 13/169 (7%)
Query: 1013 GAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVA 1072
G V+ T++D + LH+AA G+ ++ +LL++GA+ + PLHL + GH +V
Sbjct: 76 GLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVV 135
Query: 1073 KLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAES 1132
K LL +A + + +G TPL A H + LLL+ GAS+ NA +
Sbjct: 136 KCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASI-------------NASN 182
Query: 1133 VAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRV 1181
G T LH + E H + +LL HGA V K T + Q ++
Sbjct: 183 NKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAEQNSKI 231
Score = 70.9 bits (172), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 72/165 (43%), Gaps = 24/165 (14%)
Query: 1125 GAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVA 1184
G N S G +PLH++A G AD+ +LL+HGA+ + PLHL Q+ V
Sbjct: 76 GLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVV 135
Query: 1185 ELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRXXXXXXXX 1244
+ LL +NA+ + G TPL AC G + LLL A++ N
Sbjct: 136 KCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNN------------ 183
Query: 1245 XXXXXXYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATNK 1289
+G T LH + + H +V LLL GAS NK
Sbjct: 184 ------------KGNTALHEAVIEKHVFVVELLLLHGASVQVLNK 216
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 71/151 (47%), Gaps = 22/151 (14%)
Query: 31 QHNITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGA 90
Q +PLHVAA G+A+++ LLL GAN + D LH A + GH V++ LL+ A
Sbjct: 84 QDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNA 143
Query: 91 PISSKTKVRG----FYILRSGHEAVIEMLLEQGAPISSKTKVAAVLLENGASLTSTTKKG 146
+K + G Y GH ++ A+LL++GAS+ ++ KG
Sbjct: 144 K-PNKKDLSGNTPLIYACSGGHHELV-----------------ALLLQHGASINASNNKG 185
Query: 147 FTPLHLTGKYGHIKVAKLLLQKDAPVDFQGK 177
T LH H+ V +LLL A V K
Sbjct: 186 NTALHEAVIEKHVFVVELLLLHGASVQVLNK 216
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 74/194 (38%), Gaps = 44/194 (22%)
Query: 903 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASSHVVSCYSNVKVHVSLNKIQDVSS 962
G + T++ LH+A R ++ LLLKHGA++
Sbjct: 76 GLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANA----------------------- 112
Query: 963 SILRLATCDVLPQCETRLNFSNLRVREQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKD 1022
R +Q PLH+A + G+ +V LL A +
Sbjct: 113 ---------------------GARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLS 151
Query: 1023 LYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPV 1082
T L A G E+ A+LL++GAS+ ++ KG T LH H+ V +LLL A V
Sbjct: 152 GNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASV 211
Query: 1083 DFQGKNGVTPLHVA 1096
K T + A
Sbjct: 212 QVLNKRQRTAVDCA 225
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 13/148 (8%)
Query: 1082 VDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHL 1141
V+ ++G +PLHVA+ + D+ LL++GA A + PLHL
Sbjct: 79 VNVTSQDGSSPLHVAALH-------------GRADLIPLLLKHGANAGARNADQAVPLHL 125
Query: 1142 SASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKG 1201
+ +GH + LL+ A + +G TPL + LLL++ A ++ KG
Sbjct: 126 ACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKG 185
Query: 1202 FTPLHIACHYGQISMARLLLDQSANVTV 1229
T LH A + + LLL A+V V
Sbjct: 186 NTALHEAVIEKHVFVVELLLLHGASVQV 213
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 77/196 (39%), Gaps = 44/196 (22%)
Query: 837 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 896
G + T++ LH+A R ++ LLLKHGA+ A + LH+AC++ +VV
Sbjct: 76 GLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVV 135
Query: 897 ELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASSHVVSCYSNVKVHVSLNK 956
+ LL A L AC ++V LLL+HGAS
Sbjct: 136 KCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGAS------------------ 177
Query: 957 IQDVSSSILRLATCDVLPQCETRLNFSNLRVREQQTPLHIASRLGNVDIVMLLLQHGAAV 1016
+N SN + T LH A +V +V LLL HGA+V
Sbjct: 178 -----------------------INASN---NKGNTALHEAVIEKHVFVVELLLLHGASV 211
Query: 1017 DSTTKDLYTALHIAAK 1032
K TA+ A +
Sbjct: 212 QVLNKRQRTAVDCAEQ 227
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 5/100 (5%)
Query: 27 GSHFQHNITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLL 86
G+ PLH+A + G +V LL A + K G T L A GH ++ +LL
Sbjct: 113 GARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLL 172
Query: 87 EQGAPISSKTKVRGFYILRSG----HEAVIEMLLEQGAPI 122
+ GA I++ +G L H V+E+LL GA +
Sbjct: 173 QHGASINASNN-KGNTALHEAVIEKHVFVVELLLLHGASV 211
>pdb|3D9H|A Chain A, Crystal Structure Of The Splice Variant Of Human Asb9
(Hasb9-2), An Ankyrin Repeat Protein
Length = 285
Score = 87.0 bits (214), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 110/242 (45%), Gaps = 11/242 (4%)
Query: 152 LTGKYGHIKVAKLLLQKDAPVDFQG----KAPVDDVTVDYLTALHVAAHCGHARVAKTLL 207
+ GK G + +K P DF G P+ V + +H AA GH + L+
Sbjct: 24 MDGKQGGMDGSK----PAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLI 79
Query: 208 DKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIK 267
+ N + +PLH AC + V++LLKHGA + T L AC
Sbjct: 80 SQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWD 139
Query: 268 VVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIAC 327
V LLL+HGAS++ +++ P +H A ++ ++ V L+ +G +I+ L++AC
Sbjct: 140 CVNLLLQHGASVQPESDLASP-IHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLAC 198
Query: 328 KKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEA-TTEVRE 386
+ + V+ LL+ GA + P LH + ++ LL+ GA +A E +
Sbjct: 199 ENQQRACVKKLLESGADVNQGKGQDSP-LHAVVRTASEELACLLMDFGADTQAKNAEGKR 257
Query: 387 PM 388
P+
Sbjct: 258 PV 259
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 87/184 (47%), Gaps = 3/184 (1%)
Query: 305 LLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNR 364
L+ G ++ T LH AC + V++LLKHGA + T L AC
Sbjct: 78 LISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGS 137
Query: 365 IKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHI 424
V LLL+HGAS++ +++ P +H A ++ ++ V L+ +G +I+ L++
Sbjct: 138 WDCVNLLLQHGASVQPESDLASP-IHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYL 196
Query: 425 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEA-TTEV 483
AC+ + V+ LL+ GA + P LH + ++ LL+ GA +A E
Sbjct: 197 ACENQQRACVKKLLESGADVNQGKGQDSP-LHAVVRTASEELACLLMDFGADTQAKNAEG 255
Query: 484 REPM 487
+ P+
Sbjct: 256 KRPV 259
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 87/184 (47%), Gaps = 3/184 (1%)
Query: 404 LLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNR 463
L+ G ++ T LH AC + V++LLKHGA + T L AC
Sbjct: 78 LISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGS 137
Query: 464 IKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHI 523
V LLL+HGAS++ +++ P +H A ++ ++ V L+ +G +I+ L++
Sbjct: 138 WDCVNLLLQHGASVQPESDLASP-IHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYL 196
Query: 524 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEA-TTEV 582
AC+ + V+ LL+ GA + P LH + ++ LL+ GA +A E
Sbjct: 197 ACENQQRACVKKLLESGADVNQGKGQDSP-LHAVVRTASEELACLLMDFGADTQAKNAEG 255
Query: 583 REPM 586
+ P+
Sbjct: 256 KRPV 259
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 87/184 (47%), Gaps = 3/184 (1%)
Query: 503 LLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNR 562
L+ G ++ T LH AC + V++LLKHGA + T L AC
Sbjct: 78 LISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGS 137
Query: 563 IKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHI 622
V LLL+HGAS++ +++ P +H A ++ ++ V L+ +G +I+ L++
Sbjct: 138 WDCVNLLLQHGASVQPESDLASP-IHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYL 196
Query: 623 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEA-TTEV 681
AC+ + V+ LL+ GA + P LH + ++ LL+ GA +A E
Sbjct: 197 ACENQQRACVKKLLESGADVNQGKGQDSP-LHAVVRTASEELACLLMDFGADTQAKNAEG 255
Query: 682 REPM 685
+ P+
Sbjct: 256 KRPV 259
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 87/184 (47%), Gaps = 3/184 (1%)
Query: 602 LLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNR 661
L+ G ++ T LH AC + V++LLKHGA + T L AC
Sbjct: 78 LISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGS 137
Query: 662 IKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHI 721
V LLL+HGAS++ +++ P +H A ++ ++ V L+ +G +I+ L++
Sbjct: 138 WDCVNLLLQHGASVQPESDLASP-IHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYL 196
Query: 722 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEA-TTEV 780
AC+ + V+ LL+ GA + P LH + ++ LL+ GA +A E
Sbjct: 197 ACENQQRACVKKLLESGADVNQGKGQDSP-LHAVVRTASEELACLLMDFGADTQAKNAEG 255
Query: 781 REPM 784
+ P+
Sbjct: 256 KRPV 259
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 87/184 (47%), Gaps = 3/184 (1%)
Query: 701 LLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNR 760
L+ G ++ T LH AC + V++LLKHGA + T L AC
Sbjct: 78 LISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGS 137
Query: 761 IKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHI 820
V LLL+HGAS++ +++ P +H A ++ ++ V L+ +G +I+ L++
Sbjct: 138 WDCVNLLLQHGASVQPESDLASP-IHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYL 196
Query: 821 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEA-TTEV 879
AC+ + V+ LL+ GA + P LH + ++ LL+ GA +A E
Sbjct: 197 ACENQQRACVKKLLESGADVNQGKGQDSP-LHAVVRTASEELACLLMDFGADTQAKNAEG 255
Query: 880 REPM 883
+ P+
Sbjct: 256 KRPV 259
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 69/139 (49%), Gaps = 1/139 (0%)
Query: 800 LLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNR 859
L+ G ++ T LH AC + V++LLKHGA + T L AC
Sbjct: 78 LISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGS 137
Query: 860 IKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHI 919
V LLL+HGAS++ +++ P +H A ++ ++ V L+ +G +I+ L++
Sbjct: 138 WDCVNLLLQHGASVQPESDLASP-IHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYL 196
Query: 920 ACKKNRIKVVELLLKHGAS 938
AC+ + V+ LL+ GA
Sbjct: 197 ACENQQRACVKKLLESGAD 215
Score = 63.5 bits (153), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 98/221 (44%), Gaps = 22/221 (9%)
Query: 833 LLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNR 892
L+ G ++ T LH AC + V++LLKHGA + T L AC
Sbjct: 78 LISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGS 137
Query: 893 IKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASSHVVSCYSNVKVHV 952
V LLL+HGAS++ +++ P +H A ++ ++ V L+ +G N+
Sbjct: 138 WDCVNLLLQHGASVQPESDLASP-IHEAARRGHVECVNSLIAYGG---------NID--- 184
Query: 953 SLNKIQDVSSSILRLATCDVLPQCETRLNFSNLRVRE---QQTPLHIASRLGNVDIVMLL 1009
+KI + + L LA + C +L S V + Q +PLH R + ++ LL
Sbjct: 185 --HKISHLGTP-LYLACENQQRACVKKLLESGADVNQGKGQDSPLHAVVRTASEELACLL 241
Query: 1010 LQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLE-NGASL 1049
+ GA D+ K+ + + +A + LE GASL
Sbjct: 242 MDFGA--DTQAKNAEGKRPVELVPPESPLAQLFLEREGASL 280
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 84/201 (41%), Gaps = 26/201 (12%)
Query: 1187 LLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRXXXXXXXXXX 1246
L+ V+ T +PLH AC G +S ++LL A V
Sbjct: 78 LISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVN------------------ 119
Query: 1247 XXXXYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATNKGFTPLHHSAQQGHSTIV 1306
T TPL ++ G V LLL GAS + +P+H +A++GH V
Sbjct: 120 ------GVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASPIHEAARRGHVECV 173
Query: 1307 ALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQ 1366
L+ G + + G TPL++AC Q + + LL+ A+V+ Q +PLH +
Sbjct: 174 NSLIAYGGNIDHKISHLG-TPLYLACENQQRACVKKLLESGADVNQGKGQD-SPLHAVVR 231
Query: 1367 QGHSTIVALLLDRGASPNATN 1387
+ LL+D GA A N
Sbjct: 232 TASEELACLLMDFGADTQAKN 252
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 90/203 (44%), Gaps = 15/203 (7%)
Query: 1024 YTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVD 1083
++ +H AA G + L+ G ++ T +PLH GH+ K+LL+ A V+
Sbjct: 60 WSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVN 119
Query: 1084 FQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSA 1143
+ TPL A + LLL+ GAS+ + L +P+H +A
Sbjct: 120 GVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLA--------------SPIHEAA 165
Query: 1144 SEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFT 1203
GH + L+ +G ++ H + TPL+L + + + LL++ A V+ K +
Sbjct: 166 RRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDS 224
Query: 1204 PLHIACHYGQISMARLLLDQSAN 1226
PLH +A LL+D A+
Sbjct: 225 PLHAVVRTASEELACLLMDFGAD 247
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 108/256 (42%), Gaps = 33/256 (12%)
Query: 1130 AESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLK 1189
++V+ ++P+H +A GH L+ G V+ + ++PLH + ++LLK
Sbjct: 54 GDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLK 113
Query: 1190 NNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRXXXXXXXXXXXXX 1249
+ AQV+ T TPL AC G LLL A+V + S
Sbjct: 114 HGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLAS-------------- 159
Query: 1250 XYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGAS-PNATNKGFTPLHHSAQQGHSTIVAL 1308
P+H +A++GH V L+ G + + + TPL+ + + V
Sbjct: 160 -----------PIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKK 208
Query: 1309 LLDRGASPNATNKTRG-FTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQ 1367
LL+ GA N+ +G +PLH +A LL+D A+ +G P+ +
Sbjct: 209 LLESGAD---VNQGKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVPPE 265
Query: 1368 GHSTIVALLLDR-GAS 1382
S + L L+R GAS
Sbjct: 266 --SPLAQLFLEREGAS 279
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 102/245 (41%), Gaps = 18/245 (7%)
Query: 990 QQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASL 1049
+P+H A+ G+ + L+ G AV+ T D + LH A G +LL++GA +
Sbjct: 59 DWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQV 118
Query: 1050 TSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLL 1109
T TPL G LLLQ A V + + +P+H A+ H L+
Sbjct: 119 NGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPE-SDLASPIHEAARRGHVECVNSLI 177
Query: 1110 EKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGL 1169
G ++D + L TPL+L+ LLE GADV+ K
Sbjct: 178 AYGGNIDHKISHLG-------------TPLYLACENQQRACVKKLLESGADVNQ-GKGQD 223
Query: 1170 TPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTV 1229
+PLH + +A LL+ A +G P+ + + +A+L L++ ++
Sbjct: 224 SPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELV--PPESPLAQLFLEREG-ASL 280
Query: 1230 PKNFP 1234
PK P
Sbjct: 281 PKPKP 285
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 102/238 (42%), Gaps = 33/238 (13%)
Query: 24 NPFGSHFQHNITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIE 83
NP + +P+H AA G + L+S+G ++ T D ++ LH A GH + ++
Sbjct: 50 NPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVK 109
Query: 84 MLLEQGAPISSKTK---VRGFYILRSGHEAVIEMLLEQGAPISSKTKVAAVLLENGASLT 140
+LL+ GA ++ T F SG + +LL+ GA + ++ +A
Sbjct: 110 ILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLA----------- 158
Query: 141 STTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKAPVDDVTVDYL-TALHVAAHCGH 199
+P+H + GH++ L+ +D + + +L T L++A
Sbjct: 159 -------SPIHEAARRGHVECVNSLIAYGGNIDHK---------ISHLGTPLYLACENQQ 202
Query: 200 ARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEA-TTEVREPM 256
K LL+ AD N + +PLH + ++ LL+ GA +A E + P+
Sbjct: 203 RACVKKLLESGADVN-QGKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPV 259
Score = 33.5 bits (75), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%)
Query: 1314 ASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIV 1373
++P + ++P+H A +G R L+ Q V+ T +PLH + GH + V
Sbjct: 49 SNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCV 108
Query: 1374 ALLLDRGASPNA 1385
+LL GA N
Sbjct: 109 KILLKHGAQVNG 120
>pdb|1N0Q|A Chain A, 3ank: A Designed Ankyrin Repeat Protein With Three Identical
Consensus Repeats
pdb|1N0Q|B Chain B, 3ank: A Designed Ankyrin Repeat Protein With Three Identical
Consensus Repeats
Length = 93
Score = 84.3 bits (207), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 63/90 (70%)
Query: 991 QTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLT 1050
+TPLH+A+R G++++V LLL+ GA V++ K+ T LH+AA+ G EV +LLE GA +
Sbjct: 3 RTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVN 62
Query: 1051 STTKKGFTPLHLTGKYGHIKVAKLLLQKDA 1080
+ K G TPLHL + GH++V KLLL+ A
Sbjct: 63 AKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92
Score = 83.6 bits (205), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 58/89 (65%)
Query: 1025 TALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDF 1084
T LH+AA+ G EV +LLE GA + + K G TPLHL + GH++V KLLL+ A V+
Sbjct: 4 TPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNA 63
Query: 1085 QGKNGVTPLHVASHYDHQNVALLLLEKGA 1113
+ KNG TPLH+A+ H V LLLE GA
Sbjct: 64 KDKNGRTPLHLAARNGHLEVVKLLLEAGA 92
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 58/91 (63%)
Query: 1135 GFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQV 1194
G TPLHL+A GH ++ +LLE GADV+ KNG TPLHL A+ + V +LLL+ A V
Sbjct: 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61
Query: 1195 DTPTKKGFTPLHIACHYGQISMARLLLDQSA 1225
+ K G TPLH+A G + + +LLL+ A
Sbjct: 62 NAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92
Score = 81.3 bits (199), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Query: 1290 GFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSAN 1349
G TPLH +A+ GH +V LLL+ GA NA +K G TPLH+A G + + +LLL+ A+
Sbjct: 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKN-GRTPLHLAARNGHLEVVKLLLEAGAD 60
Query: 1350 VSCTTDQGFTPLHHSAQQGHSTIVALLLDRGA 1381
V+ G TPLH +A+ GH +V LLL+ GA
Sbjct: 61 VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 60/93 (64%), Gaps = 2/93 (2%)
Query: 1257 QGFTPLHHSAQQGHSTIVALLLDRGASPNATNK-GFTPLHHSAQQGHSTIVALLLDRGAS 1315
G TPLH +A+ GH +V LLL+ GA NA +K G TPLH +A+ GH +V LLL+ GA
Sbjct: 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60
Query: 1316 PNATNKTRGFTPLHIACHYGQISMARLLLDQSA 1348
NA +K G TPLH+A G + + +LLL+ A
Sbjct: 61 VNAKDKN-GRTPLHLAARNGHLEVVKLLLEAGA 92
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 61/104 (58%), Gaps = 13/104 (12%)
Query: 1056 GFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASM 1115
G TPLHL + GH++V KLLL+ A V+ + KNG TPLH+A+ H V LLLE GA +
Sbjct: 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61
Query: 1116 DIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGA 1159
NA+ G TPLHL+A GH ++ +LLE GA
Sbjct: 62 -------------NAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 61/99 (61%), Gaps = 8/99 (8%)
Query: 146 GFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKAPVDDVTVDYLTALHVAAHCGHARVAKT 205
G TPLHL + GH++V KLLL+ A V+ + K + T LH+AA GH V K
Sbjct: 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDK--------NGRTPLHLAARNGHLEVVKL 53
Query: 206 LLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGA 244
LL+ AD NA+ NG TPLH+A + ++VV+LLL+ GA
Sbjct: 54 LLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92
Score = 74.3 bits (181), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 60/105 (57%), Gaps = 13/105 (12%)
Query: 1088 NGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGH 1147
NG TPLH+A+ H V LLLE GA + NA+ G TPLHL+A GH
Sbjct: 1 NGRTPLHLAARNGHLEVVKLLLEAGADV-------------NAKDKNGRTPLHLAARNGH 47
Query: 1148 ADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNA 1192
++ +LLE GADV+ KNG TPLHL A+ + V +LLL+ A
Sbjct: 48 LEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 61/90 (67%), Gaps = 5/90 (5%)
Query: 35 TPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISS 94
TPLH+AA+ G +V LLL GA+++ K ++G T LH AAR+GH V+++LLE GA +++
Sbjct: 4 TPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNA 63
Query: 95 KTKVRGFYIL----RSGHEAVIEMLLEQGA 120
K K G L R+GH V+++LLE GA
Sbjct: 64 KDK-NGRTPLHLAARNGHLEVVKLLLEAGA 92
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%)
Query: 189 TALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEA 248
T LH+AA GH V K LL+ AD NA+ NG TPLH+A + ++VV+LLL+ GA + A
Sbjct: 4 TPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNA 63
Query: 249 TTEVREPMLHIACKKNRIKVVELLLKHGA 277
+ LH+A + ++VV+LLL+ GA
Sbjct: 64 KDKNGRTPLHLAARNGHLEVVKLLLEAGA 92
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 63/110 (57%), Gaps = 22/110 (20%)
Query: 65 DGLTALHCAARSGHEAVIEMLLEQGAPISSKTKVRGFYIL----RSGHEAVIEMLLEQGA 120
+G T LH AAR+GH V+++LLE GA +++K K G L R+GH V+++LLE GA
Sbjct: 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDK-NGRTPLHLAARNGHLEVVKLLLEAGA 59
Query: 121 PISSKTKVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDA 170
+++K K G TPLHL + GH++V KLLL+ A
Sbjct: 60 DVNAK-----------------DKNGRTPLHLAARNGHLEVVKLLLEAGA 92
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 58/92 (63%)
Query: 219 NGFTPLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGAS 278
NG TPLH+A + ++VV+LLL+ GA + A + LH+A + ++VV+LLL+ GA
Sbjct: 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60
Query: 279 IEATTEVREPMLHIACKKNRIKVVELLLKHGA 310
+ A + LH+A + ++VV+LLL+ GA
Sbjct: 61 VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 59/117 (50%), Gaps = 26/117 (22%)
Query: 1167 NGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSAN 1226
NG TPLHL A+ + V +LLL+ A V+ K G TPLH+A G + + +LLL+ A+
Sbjct: 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60
Query: 1227 VTVPKNFPSRXXXXXXXXXXXXXXYTNTTDQ-GFTPLHHSAQQGHSTIVALLLDRGA 1282
V N D+ G TPLH +A+ GH +V LLL+ GA
Sbjct: 61 V-------------------------NAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 41/65 (63%)
Query: 1324 GFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGASP 1383
G TPLH+A G + + +LLL+ A+V+ G TPLH +A+ GH +V LLL+ GA
Sbjct: 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61
Query: 1384 NATNK 1388
NA +K
Sbjct: 62 NAKDK 66
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 253 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 312
R P LH+A + ++VV+LLL+ GA + A + LH+A + ++VV+LLL+ GA +
Sbjct: 3 RTP-LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61
Query: 313 EATTEVREPMLHIACKKNRIKVVELLLKHGA 343
A + LH+A + ++VV+LLL+ GA
Sbjct: 62 NAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 286 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 345
R P LH+A + ++VV+LLL+ GA + A + LH+A + ++VV+LLL+ GA +
Sbjct: 3 RTP-LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61
Query: 346 EATTEVREPMLHIACKKNRIKVVELLLKHGA 376
A + LH+A + ++VV+LLL+ GA
Sbjct: 62 NAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 319 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 378
R P LH+A + ++VV+LLL+ GA + A + LH+A + ++VV+LLL+ GA +
Sbjct: 3 RTP-LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61
Query: 379 EATTEVREPMLHIACKKNRIKVVELLLKHGA 409
A + LH+A + ++VV+LLL+ GA
Sbjct: 62 NAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 352 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 411
R P LH+A + ++VV+LLL+ GA + A + LH+A + ++VV+LLL+ GA +
Sbjct: 3 RTP-LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61
Query: 412 EATTEVREPMLHIACKKNRIKVVELLLKHGA 442
A + LH+A + ++VV+LLL+ GA
Sbjct: 62 NAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 385 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 444
R P LH+A + ++VV+LLL+ GA + A + LH+A + ++VV+LLL+ GA +
Sbjct: 3 RTP-LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61
Query: 445 EATTEVREPMLHIACKKNRIKVVELLLKHGA 475
A + LH+A + ++VV+LLL+ GA
Sbjct: 62 NAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 418 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 477
R P LH+A + ++VV+LLL+ GA + A + LH+A + ++VV+LLL+ GA +
Sbjct: 3 RTP-LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61
Query: 478 EATTEVREPMLHIACKKNRIKVVELLLKHGA 508
A + LH+A + ++VV+LLL+ GA
Sbjct: 62 NAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 451 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 510
R P LH+A + ++VV+LLL+ GA + A + LH+A + ++VV+LLL+ GA +
Sbjct: 3 RTP-LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61
Query: 511 EATTEVREPMLHIACKKNRIKVVELLLKHGA 541
A + LH+A + ++VV+LLL+ GA
Sbjct: 62 NAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 484 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 543
R P LH+A + ++VV+LLL+ GA + A + LH+A + ++VV+LLL+ GA +
Sbjct: 3 RTP-LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61
Query: 544 EATTEVREPMLHIACKKNRIKVVELLLKHGA 574
A + LH+A + ++VV+LLL+ GA
Sbjct: 62 NAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 517 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 576
R P LH+A + ++VV+LLL+ GA + A + LH+A + ++VV+LLL+ GA +
Sbjct: 3 RTP-LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61
Query: 577 EATTEVREPMLHIACKKNRIKVVELLLKHGA 607
A + LH+A + ++VV+LLL+ GA
Sbjct: 62 NAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 550 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 609
R P LH+A + ++VV+LLL+ GA + A + LH+A + ++VV+LLL+ GA +
Sbjct: 3 RTP-LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61
Query: 610 EATTEVREPMLHIACKKNRIKVVELLLKHGA 640
A + LH+A + ++VV+LLL+ GA
Sbjct: 62 NAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 583 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 642
R P LH+A + ++VV+LLL+ GA + A + LH+A + ++VV+LLL+ GA +
Sbjct: 3 RTP-LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61
Query: 643 EATTEVREPMLHIACKKNRIKVVELLLKHGA 673
A + LH+A + ++VV+LLL+ GA
Sbjct: 62 NAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 616 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 675
R P LH+A + ++VV+LLL+ GA + A + LH+A + ++VV+LLL+ GA +
Sbjct: 3 RTP-LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61
Query: 676 EATTEVREPMLHIACKKNRIKVVELLLKHGA 706
A + LH+A + ++VV+LLL+ GA
Sbjct: 62 NAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 649 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 708
R P LH+A + ++VV+LLL+ GA + A + LH+A + ++VV+LLL+ GA +
Sbjct: 3 RTP-LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61
Query: 709 EATTEVREPMLHIACKKNRIKVVELLLKHGA 739
A + LH+A + ++VV+LLL+ GA
Sbjct: 62 NAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 682 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 741
R P LH+A + ++VV+LLL+ GA + A + LH+A + ++VV+LLL+ GA +
Sbjct: 3 RTP-LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61
Query: 742 EATTEVREPMLHIACKKNRIKVVELLLKHGA 772
A + LH+A + ++VV+LLL+ GA
Sbjct: 62 NAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 715 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 774
R P LH+A + ++VV+LLL+ GA + A + LH+A + ++VV+LLL+ GA +
Sbjct: 3 RTP-LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61
Query: 775 EATTEVREPMLHIACKKNRIKVVELLLKHGA 805
A + LH+A + ++VV+LLL+ GA
Sbjct: 62 NAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 748 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 807
R P LH+A + ++VV+LLL+ GA + A + LH+A + ++VV+LLL+ GA +
Sbjct: 3 RTP-LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61
Query: 808 EATTEVREPMLHIACKKNRIKVVELLLKHGA 838
A + LH+A + ++VV+LLL+ GA
Sbjct: 62 NAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 781 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 840
R P LH+A + ++VV+LLL+ GA + A + LH+A + ++VV+LLL+ GA +
Sbjct: 3 RTP-LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61
Query: 841 EATTEVREPMLHIACKKNRIKVVELLLKHGA 871
A + LH+A + ++VV+LLL+ GA
Sbjct: 62 NAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 814 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 873
R P LH+A + ++VV+LLL+ GA + A + LH+A + ++VV+LLL+ GA +
Sbjct: 3 RTP-LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61
Query: 874 EATTEVREPMLHIACKKNRIKVVELLLKHGA 904
A + LH+A + ++VV+LLL+ GA
Sbjct: 62 NAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 847 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 906
R P LH+A + ++VV+LLL+ GA + A + LH+A + ++VV+LLL+ GA +
Sbjct: 3 RTP-LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61
Query: 907 EATTEVREPMLHIACKKNRIKVVELLLKHGA 937
A + LH+A + ++VV+LLL+ GA
Sbjct: 62 NAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92
Score = 57.0 bits (136), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 55/107 (51%), Gaps = 25/107 (23%)
Query: 105 RSGHEAVIEMLLEQGAPISSKTKVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKL 164
R+GH V+++LLE GA +++K K G TPLHL + GH++V KL
Sbjct: 11 RNGHLEVVKLLLEAGADVNAKDK-----------------NGRTPLHLAARNGHLEVVKL 53
Query: 165 LLQKDAPVDFQGKAPVDDVTVDYLTALHVAAHCGHARVAKTLLDKKA 211
LL+ A V+ + K + T LH+AA GH V K LL+ A
Sbjct: 54 LLEAGADVNAKDK--------NGRTPLHLAARNGHLEVVKLLLEAGA 92
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 45/64 (70%)
Query: 984 NLRVREQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLL 1043
N + + +TPLH+A+R G++++V LLL+ GA V++ K+ T LH+AA+ G EV +LL
Sbjct: 29 NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL 88
Query: 1044 ENGA 1047
E GA
Sbjct: 89 EAGA 92
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 45/135 (33%)
Query: 880 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASS 939
R P LH+A + ++VV+LLL+ GA + A + LH+A + ++VV+LLL+ GA
Sbjct: 3 RTP-LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA-- 59
Query: 940 HVVSCYSNVKVHVSLNKIQDVSSSILRLATCDVLPQCETRLNFSNLRVREQQTPLHIASR 999
DV N + + +TPLH+A+R
Sbjct: 60 -------------------DV-----------------------NAKDKNGRTPLHLAAR 77
Query: 1000 LGNVDIVMLLLQHGA 1014
G++++V LLL+ GA
Sbjct: 78 NGHLEVVKLLLEAGA 92
>pdb|1K1B|A Chain A, Crystal Structure Of The Ankyrin Repeat Domain Of Bcl-3: A
Unique Member Of The Ikappab Protein Family
pdb|1K1A|A Chain A, Crystal Structure Of The Ankyrin Repeat Domain Of Bcl-3: A
Unique Member Of The Ikappab Protein Family
Length = 241
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 96/202 (47%), Gaps = 11/202 (5%)
Query: 219 NGFTPLHIACKKNRI----KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 274
+G TPLHIA + + ++V L + G ++ +R+ LH+A VV LL+
Sbjct: 8 DGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVT 67
Query: 275 HGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVRE----PMLHIACKKN 330
GAS A + H+AC+ + LL A E R LH+A
Sbjct: 68 AGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTE 127
Query: 331 RIKVVELLLKHGASIEATT--EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 388
+ V+LLL+ GA I+A R P++H A + N + +V+LLL+HGA++ A
Sbjct: 128 CQETVQLLLERGADIDAVDIKSGRSPLIH-AVENNSLSMVQLLLQHGANVNAQMYSGSSA 186
Query: 389 LHIACKKNRIKVVELLLKHGAS 410
LH A + + +V L++ GA
Sbjct: 187 LHSASGRGLLPLVRTLVRSGAD 208
Score = 81.3 bits (199), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 104/215 (48%), Gaps = 11/215 (5%)
Query: 752 LHIACKKNRI----KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 807
LHIA + + ++V L + G ++ +R+ LH+A VV LL+ GAS
Sbjct: 13 LHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASP 72
Query: 808 EATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVRE----PMLHIACKKNRIKVV 863
A + H+AC+ + LL A E R LH+A + V
Sbjct: 73 MALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETV 132
Query: 864 ELLLKHGASIEATT--EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIAC 921
+LLL+ GA I+A R P++H A + N + +V+LLL+HGA++ A LH A
Sbjct: 133 QLLLERGADIDAVDIKSGRSPLIH-AVENNSLSMVQLLLQHGANVNAQMYSGSSALHSAS 191
Query: 922 KKNRIKVVELLLKHGASSHVVSCYSNVKVHVSLNK 956
+ + +V L++ GA S + +C+++ + V+ ++
Sbjct: 192 GRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSR 226
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 92/197 (46%), Gaps = 11/197 (5%)
Query: 257 LHIACKKNRI----KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 312
LHIA + + ++V L + G ++ +R+ LH+A VV LL+ GAS
Sbjct: 13 LHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASP 72
Query: 313 EATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVRE----PMLHIACKKNRIKVV 368
A + H+AC+ + LL A E R LH+A + V
Sbjct: 73 MALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETV 132
Query: 369 ELLLKHGASIEATT--EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIAC 426
+LLL+ GA I+A R P++H A + N + +V+LLL+HGA++ A LH A
Sbjct: 133 QLLLERGADIDAVDIKSGRSPLIH-AVENNSLSMVQLLLQHGANVNAQMYSGSSALHSAS 191
Query: 427 KKNRIKVVELLLKHGAS 443
+ + +V L++ GA
Sbjct: 192 GRGLLPLVRTLVRSGAD 208
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 92/197 (46%), Gaps = 11/197 (5%)
Query: 290 LHIACKKNRI----KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 345
LHIA + + ++V L + G ++ +R+ LH+A VV LL+ GAS
Sbjct: 13 LHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASP 72
Query: 346 EATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVRE----PMLHIACKKNRIKVV 401
A + H+AC+ + LL A E R LH+A + V
Sbjct: 73 MALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETV 132
Query: 402 ELLLKHGASIEATT--EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIAC 459
+LLL+ GA I+A R P++H A + N + +V+LLL+HGA++ A LH A
Sbjct: 133 QLLLERGADIDAVDIKSGRSPLIH-AVENNSLSMVQLLLQHGANVNAQMYSGSSALHSAS 191
Query: 460 KKNRIKVVELLLKHGAS 476
+ + +V L++ GA
Sbjct: 192 GRGLLPLVRTLVRSGAD 208
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 92/197 (46%), Gaps = 11/197 (5%)
Query: 323 LHIACKKNRI----KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 378
LHIA + + ++V L + G ++ +R+ LH+A VV LL+ GAS
Sbjct: 13 LHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASP 72
Query: 379 EATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVRE----PMLHIACKKNRIKVV 434
A + H+AC+ + LL A E R LH+A + V
Sbjct: 73 MALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETV 132
Query: 435 ELLLKHGASIEATT--EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIAC 492
+LLL+ GA I+A R P++H A + N + +V+LLL+HGA++ A LH A
Sbjct: 133 QLLLERGADIDAVDIKSGRSPLIH-AVENNSLSMVQLLLQHGANVNAQMYSGSSALHSAS 191
Query: 493 KKNRIKVVELLLKHGAS 509
+ + +V L++ GA
Sbjct: 192 GRGLLPLVRTLVRSGAD 208
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 92/197 (46%), Gaps = 11/197 (5%)
Query: 356 LHIACKKNRI----KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 411
LHIA + + ++V L + G ++ +R+ LH+A VV LL+ GAS
Sbjct: 13 LHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASP 72
Query: 412 EATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVRE----PMLHIACKKNRIKVV 467
A + H+AC+ + LL A E R LH+A + V
Sbjct: 73 MALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETV 132
Query: 468 ELLLKHGASIEATT--EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIAC 525
+LLL+ GA I+A R P++H A + N + +V+LLL+HGA++ A LH A
Sbjct: 133 QLLLERGADIDAVDIKSGRSPLIH-AVENNSLSMVQLLLQHGANVNAQMYSGSSALHSAS 191
Query: 526 KKNRIKVVELLLKHGAS 542
+ + +V L++ GA
Sbjct: 192 GRGLLPLVRTLVRSGAD 208
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 92/197 (46%), Gaps = 11/197 (5%)
Query: 389 LHIACKKNRI----KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 444
LHIA + + ++V L + G ++ +R+ LH+A VV LL+ GAS
Sbjct: 13 LHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASP 72
Query: 445 EATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVRE----PMLHIACKKNRIKVV 500
A + H+AC+ + LL A E R LH+A + V
Sbjct: 73 MALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETV 132
Query: 501 ELLLKHGASIEATT--EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIAC 558
+LLL+ GA I+A R P++H A + N + +V+LLL+HGA++ A LH A
Sbjct: 133 QLLLERGADIDAVDIKSGRSPLIH-AVENNSLSMVQLLLQHGANVNAQMYSGSSALHSAS 191
Query: 559 KKNRIKVVELLLKHGAS 575
+ + +V L++ GA
Sbjct: 192 GRGLLPLVRTLVRSGAD 208
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 92/197 (46%), Gaps = 11/197 (5%)
Query: 422 LHIACKKNRI----KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 477
LHIA + + ++V L + G ++ +R+ LH+A VV LL+ GAS
Sbjct: 13 LHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASP 72
Query: 478 EATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVRE----PMLHIACKKNRIKVV 533
A + H+AC+ + LL A E R LH+A + V
Sbjct: 73 MALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETV 132
Query: 534 ELLLKHGASIEATT--EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIAC 591
+LLL+ GA I+A R P++H A + N + +V+LLL+HGA++ A LH A
Sbjct: 133 QLLLERGADIDAVDIKSGRSPLIH-AVENNSLSMVQLLLQHGANVNAQMYSGSSALHSAS 191
Query: 592 KKNRIKVVELLLKHGAS 608
+ + +V L++ GA
Sbjct: 192 GRGLLPLVRTLVRSGAD 208
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 92/197 (46%), Gaps = 11/197 (5%)
Query: 455 LHIACKKNRI----KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 510
LHIA + + ++V L + G ++ +R+ LH+A VV LL+ GAS
Sbjct: 13 LHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASP 72
Query: 511 EATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVRE----PMLHIACKKNRIKVV 566
A + H+AC+ + LL A E R LH+A + V
Sbjct: 73 MALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETV 132
Query: 567 ELLLKHGASIEATT--EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIAC 624
+LLL+ GA I+A R P++H A + N + +V+LLL+HGA++ A LH A
Sbjct: 133 QLLLERGADIDAVDIKSGRSPLIH-AVENNSLSMVQLLLQHGANVNAQMYSGSSALHSAS 191
Query: 625 KKNRIKVVELLLKHGAS 641
+ + +V L++ GA
Sbjct: 192 GRGLLPLVRTLVRSGAD 208
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 92/197 (46%), Gaps = 11/197 (5%)
Query: 488 LHIACKKNRI----KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 543
LHIA + + ++V L + G ++ +R+ LH+A VV LL+ GAS
Sbjct: 13 LHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASP 72
Query: 544 EATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVRE----PMLHIACKKNRIKVV 599
A + H+AC+ + LL A E R LH+A + V
Sbjct: 73 MALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETV 132
Query: 600 ELLLKHGASIEATT--EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIAC 657
+LLL+ GA I+A R P++H A + N + +V+LLL+HGA++ A LH A
Sbjct: 133 QLLLERGADIDAVDIKSGRSPLIH-AVENNSLSMVQLLLQHGANVNAQMYSGSSALHSAS 191
Query: 658 KKNRIKVVELLLKHGAS 674
+ + +V L++ GA
Sbjct: 192 GRGLLPLVRTLVRSGAD 208
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 92/197 (46%), Gaps = 11/197 (5%)
Query: 521 LHIACKKNRI----KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 576
LHIA + + ++V L + G ++ +R+ LH+A VV LL+ GAS
Sbjct: 13 LHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASP 72
Query: 577 EATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVRE----PMLHIACKKNRIKVV 632
A + H+AC+ + LL A E R LH+A + V
Sbjct: 73 MALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETV 132
Query: 633 ELLLKHGASIEATT--EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIAC 690
+LLL+ GA I+A R P++H A + N + +V+LLL+HGA++ A LH A
Sbjct: 133 QLLLERGADIDAVDIKSGRSPLIH-AVENNSLSMVQLLLQHGANVNAQMYSGSSALHSAS 191
Query: 691 KKNRIKVVELLLKHGAS 707
+ + +V L++ GA
Sbjct: 192 GRGLLPLVRTLVRSGAD 208
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 92/197 (46%), Gaps = 11/197 (5%)
Query: 554 LHIACKKNRI----KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 609
LHIA + + ++V L + G ++ +R+ LH+A VV LL+ GAS
Sbjct: 13 LHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASP 72
Query: 610 EATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVRE----PMLHIACKKNRIKVV 665
A + H+AC+ + LL A E R LH+A + V
Sbjct: 73 MALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETV 132
Query: 666 ELLLKHGASIEATT--EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIAC 723
+LLL+ GA I+A R P++H A + N + +V+LLL+HGA++ A LH A
Sbjct: 133 QLLLERGADIDAVDIKSGRSPLIH-AVENNSLSMVQLLLQHGANVNAQMYSGSSALHSAS 191
Query: 724 KKNRIKVVELLLKHGAS 740
+ + +V L++ GA
Sbjct: 192 GRGLLPLVRTLVRSGAD 208
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 92/197 (46%), Gaps = 11/197 (5%)
Query: 587 LHIACKKNRI----KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 642
LHIA + + ++V L + G ++ +R+ LH+A VV LL+ GAS
Sbjct: 13 LHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASP 72
Query: 643 EATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVRE----PMLHIACKKNRIKVV 698
A + H+AC+ + LL A E R LH+A + V
Sbjct: 73 MALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETV 132
Query: 699 ELLLKHGASIEATT--EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIAC 756
+LLL+ GA I+A R P++H A + N + +V+LLL+HGA++ A LH A
Sbjct: 133 QLLLERGADIDAVDIKSGRSPLIH-AVENNSLSMVQLLLQHGANVNAQMYSGSSALHSAS 191
Query: 757 KKNRIKVVELLLKHGAS 773
+ + +V L++ GA
Sbjct: 192 GRGLLPLVRTLVRSGAD 208
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 92/197 (46%), Gaps = 11/197 (5%)
Query: 686 LHIACKKNRI----KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 741
LHIA + + ++V L + G ++ +R+ LH+A VV LL+ GAS
Sbjct: 13 LHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASP 72
Query: 742 EATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVRE----PMLHIACKKNRIKVV 797
A + H+AC+ + LL A E R LH+A + V
Sbjct: 73 MALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETV 132
Query: 798 ELLLKHGASIEATT--EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIAC 855
+LLL+ GA I+A R P++H A + N + +V+LLL+HGA++ A LH A
Sbjct: 133 QLLLERGADIDAVDIKSGRSPLIH-AVENNSLSMVQLLLQHGANVNAQMYSGSSALHSAS 191
Query: 856 KKNRIKVVELLLKHGAS 872
+ + +V L++ GA
Sbjct: 192 GRGLLPLVRTLVRSGAD 208
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 94/211 (44%), Gaps = 11/211 (5%)
Query: 140 TSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKAPVDDVTVDYLTALHVAAHCGH 199
T + G TPLH+ G++ L+ + QG +D T LH+A
Sbjct: 3 TRADEDGDTPLHIAVVQGNLPAVHRLVN----LFQQGGRELDIYNNLRQTPLHLAVITTL 58
Query: 200 ARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVRE----P 255
V + L+ A P A +G T H+AC+ + LL A E R
Sbjct: 59 PSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLT 118
Query: 256 MLHIACKKNRIKVVELLLKHGASIEATT--EVREPMLHIACKKNRIKVVELLLKHGASIE 313
LH+A + V+LLL+ GA I+A R P++H A + N + +V+LLL+HGA++
Sbjct: 119 ALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIH-AVENNSLSMVQLLLQHGANVN 177
Query: 314 ATTEVREPMLHIACKKNRIKVVELLLKHGAS 344
A LH A + + +V L++ GA
Sbjct: 178 AQMYSGSSALHSASGRGLLPLVRTLVRSGAD 208
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 102/228 (44%), Gaps = 20/228 (8%)
Query: 989 EQQTPLHIASRLGNVD----IVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLE 1044
+ TPLHIA GN+ +V L Q G +D T LH+A V +L+
Sbjct: 8 DGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVT 67
Query: 1045 NGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAP--VDFQGKN--GVTPLHVASHYD 1100
GAS + + G T HL ++ + LL AP +D + +N G+T LHVA + +
Sbjct: 68 AGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTE 127
Query: 1101 HQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGAD 1160
Q LLLE+GA +D + +G +PL + M +LL+HGA+
Sbjct: 128 CQETVQLLLERGADIDAV------------DIKSGRSPLIHAVENNSLSMVQLLLQHGAN 175
Query: 1161 VSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIA 1208
V+ +G + LH + + + L+++ A TPL +A
Sbjct: 176 VNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVA 223
Score = 60.8 bits (146), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 99/218 (45%), Gaps = 21/218 (9%)
Query: 65 DGLTALHCAARSGHEAVIEML---LEQGAPISSKTKVRGFYILRSGHEAVIEMLLEQGAP 121
DG T LH A G+ + L +QG R I + + + + A
Sbjct: 8 DGDTPLHIAVVQGNLPAVHRLVNLFQQGG--------RELDIYNNLRQTPLHL-----AV 54
Query: 122 ISSKTKVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKAPVD 181
I++ V +L+ GAS + + G T HL ++ + LL AP G ++
Sbjct: 55 ITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAP----GTLDLE 110
Query: 182 DVTVDYLTALHVAAHCGHARVAKTLLDKKADPNARAL-NGFTPLHIACKKNRIKVVELLL 240
D LTALHVA + + LL++ AD +A + +G +PL A + N + +V+LLL
Sbjct: 111 ARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLL 170
Query: 241 KHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGAS 278
+HGA++ A LH A + + +V L++ GA
Sbjct: 171 QHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGAD 208
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 102/240 (42%), Gaps = 41/240 (17%)
Query: 1135 GFTPLHLSASEGHADMSAM-----LLEHGA---DVSHAAKNGLTPLHLCAQEDRVGVAEL 1186
G TPLH++ +G ++ A+ L + G D+ + + TPLHL V L
Sbjct: 9 GDTPLHIAVVQG--NLPAVHRLVNLFQQGGRELDIYNNLRQ--TPLHLAVITTLPSVVRL 64
Query: 1187 LLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVP---KNFPSRXXXXXXX 1243
L+ A + G T H+AC + + R LLD +A T+ +N+
Sbjct: 65 LVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNY---------- 114
Query: 1244 XXXXXXXYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATN--KGFTPLHHSAQQG 1301
G T LH + V LLL+RGA +A + G +PL H+ +
Sbjct: 115 -------------DGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENN 161
Query: 1302 HSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPL 1361
++V LLL GA+ NA + G + LH A G + + R L+ A+ S TPL
Sbjct: 162 SLSMVQLLLQHGANVNAQMYS-GSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPL 220
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 91/209 (43%), Gaps = 31/209 (14%)
Query: 35 TPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISS 94
TPLH+A ++V LL++ GA+ R G TA H A + LL+ AP +
Sbjct: 48 TPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTL 107
Query: 95 KTKVRGFYILRSGHEAV-------IEMLLEQGAPISSKTKVAAVLLENGASLTSTTKKGF 147
+ R + L + H AV +++LLE+GA I + K G
Sbjct: 108 DLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAV----------------DIKSGR 151
Query: 148 TPLHLTGKYGHIKVAKLLLQKDAPVDFQGKAPVDDVTVDYLTALHVAAHCGHARVAKTLL 207
+PL + + + +LLLQ A V+ Q +ALH A+ G + +TL+
Sbjct: 152 SPLIHAVENNSLSMVQLLLQHGANVNAQ--------MYSGSSALHSASGRGLLPLVRTLV 203
Query: 208 DKKADPNARALNGFTPLHIACKKNRIKVV 236
AD + + + TPL +A + I ++
Sbjct: 204 RSGADSSLKNCHNDTPLMVARSRRVIDIL 232
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 94/251 (37%), Gaps = 51/251 (20%)
Query: 818 LHIACKKNRI----KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 873
LHIA + + ++V L + G ++ +R+ LH+A VV LL+ GAS
Sbjct: 13 LHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASP 72
Query: 874 EATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVRE----PMLHIACKKNRIKVV 929
A + H+AC+ + LL A E R LH+A + V
Sbjct: 73 MALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETV 132
Query: 930 ELLLKHGASSHVVSCYSNVKVHVSLNKIQDVSSSILRLATCDVLPQCETRLNFSNLRVRE 989
+LLL+ GA V ++
Sbjct: 133 QLLLERGADIDAVD-------------------------------------------IKS 149
Query: 990 QQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASL 1049
++PL A ++ +V LLLQHGA V++ +ALH A+ G + L+ +GA
Sbjct: 150 GRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADS 209
Query: 1050 TSTTKKGFTPL 1060
+ TPL
Sbjct: 210 SLKNCHNDTPL 220
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 95/236 (40%), Gaps = 35/236 (14%)
Query: 1162 SHAAKNGLTPLHLCAQEDRVG----VAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMA 1217
+ A ++G TPLH+ + + + L + ++D TPLH+A S+
Sbjct: 3 TRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVV 62
Query: 1218 RLLLDQSANVTVPKNFPSRXXXXXXXXXXXXXXYTNTTDQGFTPLHHSAQQGHSTIVALL 1277
RLL+ A+ P G T H + + T + L
Sbjct: 63 RLLVTAGAS---PMALDR---------------------HGQTAAHLACEHRSPTCLRAL 98
Query: 1278 LDRGASPNATN------KGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIA 1331
LD A+P + G T LH + V LLL+RGA +A + G +PL A
Sbjct: 99 LD-SAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHA 157
Query: 1332 CHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATN 1387
+SM +LLL ANV+ G + LH ++ +G +V L+ GA + N
Sbjct: 158 VENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKN 213
Score = 32.7 bits (73), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 34 ITPLHVAAKWGKANMVTLLLSRGANIDN-KTRDGLTALHCAARSGHEAVIEMLLEQGAPI 92
+T LHVA V LLL RGA+ID + G + L A + +++++LL+ GA +
Sbjct: 117 LTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANV 176
Query: 93 SSK 95
+++
Sbjct: 177 NAQ 179
>pdb|3F6Q|A Chain A, Crystal Structure Of Integrin-Linked Kinase Ankyrin Repeat
Domain In Complex With Pinch1 Lim1 Domain
pdb|3IXE|A Chain A, Structural Basis Of Competition Between Pinch1 And Pinch2
For Binding To The Ankyrin Repeat Domain Of
Integrin-Linked Kinase
Length = 179
Score = 81.3 bits (199), Expect = 4e-15, Method: Composition-based stats.
Identities = 46/107 (42%), Positives = 60/107 (56%), Gaps = 2/107 (1%)
Query: 1256 DQGFTPLHHSAQQGHSTIVALLLDRGASPNATNKG-FTPLHHSAQQGHSTIVALLLDRGA 1314
D GF+PLH + ++G S +V +L+ RGA N N+G TPLH +A GH IV LL A
Sbjct: 37 DHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKA 96
Query: 1315 SPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPL 1361
NA N+ G PLH AC +GQ +A L+ A VS G P+
Sbjct: 97 DINAVNE-HGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPV 142
Score = 68.2 bits (165), Expect = 3e-11, Method: Composition-based stats.
Identities = 38/124 (30%), Positives = 65/124 (52%), Gaps = 3/124 (2%)
Query: 1267 QQGHSTIVALLLDRGASP--NATNKGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRG 1324
++G++ V L LD + + GF+PLH + ++G S +V +L+ RGA N N+
Sbjct: 14 REGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDD 73
Query: 1325 FTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGASPN 1384
TPLH+A +G + + LL A+++ + G PLH++ G + L+ GA +
Sbjct: 74 -TPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVS 132
Query: 1385 ATNK 1388
NK
Sbjct: 133 ICNK 136
Score = 63.2 bits (152), Expect = 9e-10, Method: Composition-based stats.
Identities = 44/137 (32%), Positives = 64/137 (46%), Gaps = 16/137 (11%)
Query: 999 RLGNVDIVMLLLQHGAAVDSTTKDL-------YTALHIAAKEGQEEVAAVLLENGASLTS 1051
R GN V L L D+T DL ++ LH A +EG+ V +L+ GA +
Sbjct: 14 REGNAVAVRLWL------DNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINV 67
Query: 1052 TTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEK 1111
+ TPLHL +GH + + LLQ A ++ ++G PLH A + VA L+
Sbjct: 68 MNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVAN 127
Query: 1112 GASMDIATTLLEYGAKP 1128
GA + I +YG P
Sbjct: 128 GALVSICN---KYGEMP 141
Score = 63.2 bits (152), Expect = 9e-10, Method: Composition-based stats.
Identities = 40/116 (34%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
Query: 198 GHARVAKTLLDK-KADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVREPM 256
G+A + LD + D N +GF+PLH AC++ R VVE+L+ GA I +
Sbjct: 16 GNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTP 75
Query: 257 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 312
LH+A +V+ LL++ A I A E LH AC + +V E L+ +GA +
Sbjct: 76 LHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALV 131
Score = 63.2 bits (152), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 51/95 (53%)
Query: 1135 GFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQV 1194
GF+PLH + EG + + ML+ GA ++ + TPLHL A + + LL+ A +
Sbjct: 39 GFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADI 98
Query: 1195 DTPTKKGFTPLHIACHYGQISMARLLLDQSANVTV 1229
+ + G PLH AC +GQ +A L+ A V++
Sbjct: 99 NAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSI 133
Score = 58.9 bits (141), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/101 (35%), Positives = 54/101 (53%), Gaps = 8/101 (7%)
Query: 146 GFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKAPVDDVTVDYLTALHVAAHCGHARVAKT 205
GF+PLH + G V ++L+ + A ++ + DD T LH+AA GH + +
Sbjct: 39 GFSPLHWACREGRSAVVEMLIMRGARINVMNRG--DD------TPLHLAASHGHRDIVQK 90
Query: 206 LLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASI 246
LL KAD NA +G PLH AC + +V E L+ +GA +
Sbjct: 91 LLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALV 131
Score = 57.0 bits (136), Expect = 6e-08, Method: Composition-based stats.
Identities = 33/105 (31%), Positives = 52/105 (49%)
Query: 992 TPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTS 1051
+PLH A R G +V +L+ GA ++ + T LH+AA G ++ LL+ A + +
Sbjct: 41 SPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINA 100
Query: 1052 TTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVA 1096
+ G PLH +G +VA+ L+ A V K G P+ A
Sbjct: 101 VNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKA 145
Score = 57.0 bits (136), Expect = 8e-08, Method: Composition-based stats.
Identities = 38/121 (31%), Positives = 57/121 (47%), Gaps = 13/121 (10%)
Query: 1088 NGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGH 1147
+G +PLH A V +L+ +GA +++ TPLHL+AS GH
Sbjct: 38 HGFSPLHWACREGRSAVVEMLIMRGARINVMNR-------------GDDTPLHLAASHGH 84
Query: 1148 ADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHI 1207
D+ LL++ AD++ ++G PLH + VAE L+ N A V K G P+
Sbjct: 85 RDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDK 144
Query: 1208 A 1208
A
Sbjct: 145 A 145
Score = 56.6 bits (135), Expect = 9e-08, Method: Composition-based stats.
Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 3/106 (2%)
Query: 21 NTINPFGSHFQHNITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEA 80
NT N H +PLH A + G++ +V +L+ RGA I+ R T LH AA GH
Sbjct: 27 NTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRD 86
Query: 81 VIEMLLEQGAPISSKTK---VRGFYILRSGHEAVIEMLLEQGAPIS 123
+++ LL+ A I++ + V Y G + V E L+ GA +S
Sbjct: 87 IVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVS 132
Score = 54.7 bits (130), Expect = 4e-07, Method: Composition-based stats.
Identities = 42/144 (29%), Positives = 61/144 (42%), Gaps = 44/144 (30%)
Query: 917 LHIACKKNRIKVVELLLKHGASSHVVSCYSNVKVHVSLNKIQDVSSSILRLATCDVLPQC 976
LH AC++ R VVE+L+ GA
Sbjct: 43 LHWACREGRSAVVEMLIMRGA--------------------------------------- 63
Query: 977 ETRLNFSNLRVREQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQE 1036
R+N N R TPLH+A+ G+ DIV LLQ+ A +++ + LH A GQ+
Sbjct: 64 --RINVMN---RGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQD 118
Query: 1037 EVAAVLLENGASLTSTTKKGFTPL 1060
+VA L+ NGA ++ K G P+
Sbjct: 119 QVAEDLVANGALVSICNKYGEMPV 142
Score = 54.3 bits (129), Expect = 5e-07, Method: Composition-based stats.
Identities = 33/100 (33%), Positives = 50/100 (50%)
Query: 851 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 910
LH AC++ R VVE+L+ GA I + LH+A +V+ LL++ A I A
Sbjct: 43 LHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVN 102
Query: 911 EVREPMLHIACKKNRIKVVELLLKHGASSHVVSCYSNVKV 950
E LH AC + +V E L+ +GA + + Y + V
Sbjct: 103 EHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPV 142
Score = 53.9 bits (128), Expect = 6e-07, Method: Composition-based stats.
Identities = 42/148 (28%), Positives = 61/148 (41%), Gaps = 25/148 (16%)
Query: 1175 CAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFP 1234
C + + V V L ++ GF+PLH AC G+ ++ +L+ + A + V
Sbjct: 13 CREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINV----- 67
Query: 1235 SRXXXXXXXXXXXXXXYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATNK-GFTP 1293
N D TPLH +A GH IV LL A NA N+ G P
Sbjct: 68 -----------------MNRGDD--TPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVP 108
Query: 1294 LHHSAQQGHSTIVALLLDRGASPNATNK 1321
LH++ G + L+ GA + NK
Sbjct: 109 LHYACFWGQDQVAEDLVANGALVSICNK 136
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 46/89 (51%)
Query: 257 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 316
LH AC++ R VVE+L+ GA I + LH+A +V+ LL++ A I A
Sbjct: 43 LHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVN 102
Query: 317 EVREPMLHIACKKNRIKVVELLLKHGASI 345
E LH AC + +V E L+ +GA +
Sbjct: 103 EHGNVPLHYACFWGQDQVAEDLVANGALV 131
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 46/89 (51%)
Query: 290 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 349
LH AC++ R VVE+L+ GA I + LH+A +V+ LL++ A I A
Sbjct: 43 LHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVN 102
Query: 350 EVREPMLHIACKKNRIKVVELLLKHGASI 378
E LH AC + +V E L+ +GA +
Sbjct: 103 EHGNVPLHYACFWGQDQVAEDLVANGALV 131
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 46/89 (51%)
Query: 323 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 382
LH AC++ R VVE+L+ GA I + LH+A +V+ LL++ A I A
Sbjct: 43 LHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVN 102
Query: 383 EVREPMLHIACKKNRIKVVELLLKHGASI 411
E LH AC + +V E L+ +GA +
Sbjct: 103 EHGNVPLHYACFWGQDQVAEDLVANGALV 131
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 46/89 (51%)
Query: 356 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 415
LH AC++ R VVE+L+ GA I + LH+A +V+ LL++ A I A
Sbjct: 43 LHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVN 102
Query: 416 EVREPMLHIACKKNRIKVVELLLKHGASI 444
E LH AC + +V E L+ +GA +
Sbjct: 103 EHGNVPLHYACFWGQDQVAEDLVANGALV 131
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 46/89 (51%)
Query: 389 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 448
LH AC++ R VVE+L+ GA I + LH+A +V+ LL++ A I A
Sbjct: 43 LHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVN 102
Query: 449 EVREPMLHIACKKNRIKVVELLLKHGASI 477
E LH AC + +V E L+ +GA +
Sbjct: 103 EHGNVPLHYACFWGQDQVAEDLVANGALV 131
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 46/89 (51%)
Query: 422 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 481
LH AC++ R VVE+L+ GA I + LH+A +V+ LL++ A I A
Sbjct: 43 LHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVN 102
Query: 482 EVREPMLHIACKKNRIKVVELLLKHGASI 510
E LH AC + +V E L+ +GA +
Sbjct: 103 EHGNVPLHYACFWGQDQVAEDLVANGALV 131
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 46/89 (51%)
Query: 455 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 514
LH AC++ R VVE+L+ GA I + LH+A +V+ LL++ A I A
Sbjct: 43 LHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVN 102
Query: 515 EVREPMLHIACKKNRIKVVELLLKHGASI 543
E LH AC + +V E L+ +GA +
Sbjct: 103 EHGNVPLHYACFWGQDQVAEDLVANGALV 131
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 46/89 (51%)
Query: 488 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 547
LH AC++ R VVE+L+ GA I + LH+A +V+ LL++ A I A
Sbjct: 43 LHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVN 102
Query: 548 EVREPMLHIACKKNRIKVVELLLKHGASI 576
E LH AC + +V E L+ +GA +
Sbjct: 103 EHGNVPLHYACFWGQDQVAEDLVANGALV 131
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 46/89 (51%)
Query: 521 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 580
LH AC++ R VVE+L+ GA I + LH+A +V+ LL++ A I A
Sbjct: 43 LHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVN 102
Query: 581 EVREPMLHIACKKNRIKVVELLLKHGASI 609
E LH AC + +V E L+ +GA +
Sbjct: 103 EHGNVPLHYACFWGQDQVAEDLVANGALV 131
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 46/89 (51%)
Query: 554 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 613
LH AC++ R VVE+L+ GA I + LH+A +V+ LL++ A I A
Sbjct: 43 LHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVN 102
Query: 614 EVREPMLHIACKKNRIKVVELLLKHGASI 642
E LH AC + +V E L+ +GA +
Sbjct: 103 EHGNVPLHYACFWGQDQVAEDLVANGALV 131
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 46/89 (51%)
Query: 587 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 646
LH AC++ R VVE+L+ GA I + LH+A +V+ LL++ A I A
Sbjct: 43 LHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVN 102
Query: 647 EVREPMLHIACKKNRIKVVELLLKHGASI 675
E LH AC + +V E L+ +GA +
Sbjct: 103 EHGNVPLHYACFWGQDQVAEDLVANGALV 131
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 46/89 (51%)
Query: 620 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 679
LH AC++ R VVE+L+ GA I + LH+A +V+ LL++ A I A
Sbjct: 43 LHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVN 102
Query: 680 EVREPMLHIACKKNRIKVVELLLKHGASI 708
E LH AC + +V E L+ +GA +
Sbjct: 103 EHGNVPLHYACFWGQDQVAEDLVANGALV 131
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 46/89 (51%)
Query: 653 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 712
LH AC++ R VVE+L+ GA I + LH+A +V+ LL++ A I A
Sbjct: 43 LHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVN 102
Query: 713 EVREPMLHIACKKNRIKVVELLLKHGASI 741
E LH AC + +V E L+ +GA +
Sbjct: 103 EHGNVPLHYACFWGQDQVAEDLVANGALV 131
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 46/89 (51%)
Query: 686 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 745
LH AC++ R VVE+L+ GA I + LH+A +V+ LL++ A I A
Sbjct: 43 LHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVN 102
Query: 746 EVREPMLHIACKKNRIKVVELLLKHGASI 774
E LH AC + +V E L+ +GA +
Sbjct: 103 EHGNVPLHYACFWGQDQVAEDLVANGALV 131
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 46/89 (51%)
Query: 719 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 778
LH AC++ R VVE+L+ GA I + LH+A +V+ LL++ A I A
Sbjct: 43 LHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVN 102
Query: 779 EVREPMLHIACKKNRIKVVELLLKHGASI 807
E LH AC + +V E L+ +GA +
Sbjct: 103 EHGNVPLHYACFWGQDQVAEDLVANGALV 131
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 46/89 (51%)
Query: 752 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 811
LH AC++ R VVE+L+ GA I + LH+A +V+ LL++ A I A
Sbjct: 43 LHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVN 102
Query: 812 EVREPMLHIACKKNRIKVVELLLKHGASI 840
E LH AC + +V E L+ +GA +
Sbjct: 103 EHGNVPLHYACFWGQDQVAEDLVANGALV 131
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 46/89 (51%)
Query: 785 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 844
LH AC++ R VVE+L+ GA I + LH+A +V+ LL++ A I A
Sbjct: 43 LHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVN 102
Query: 845 EVREPMLHIACKKNRIKVVELLLKHGASI 873
E LH AC + +V E L+ +GA +
Sbjct: 103 EHGNVPLHYACFWGQDQVAEDLVANGALV 131
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 46/89 (51%)
Query: 818 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 877
LH AC++ R VVE+L+ GA I + LH+A +V+ LL++ A I A
Sbjct: 43 LHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVN 102
Query: 878 EVREPMLHIACKKNRIKVVELLLKHGASI 906
E LH AC + +V E L+ +GA +
Sbjct: 103 EHGNVPLHYACFWGQDQVAEDLVANGALV 131
Score = 48.9 bits (115), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/146 (23%), Positives = 61/146 (41%), Gaps = 25/146 (17%)
Query: 1145 EGHADMSAMLLEHGA-DVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFT 1203
EG+A + L++ D++ +G +PLH +E R V E+L+ A+++ + T
Sbjct: 15 EGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDT 74
Query: 1204 PLHIACHYGQISMARLLLDQSANVTVPKNFPSRXXXXXXXXXXXXXXYTNTTDQGFTPLH 1263
PLH+A +G + + LL A++ + G PLH
Sbjct: 75 PLHLAASHGHRDIVQKLLQYKADINA------------------------VNEHGNVPLH 110
Query: 1264 HSAQQGHSTIVALLLDRGASPNATNK 1289
++ G + L+ GA + NK
Sbjct: 111 YACFWGQDQVAEDLVANGALVSICNK 136
Score = 44.7 bits (104), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 884 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASSHVVS 943
LH AC++ R VVE+L+ GA I + LH+A +V+ LL++ A + V+
Sbjct: 43 LHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVN 102
Query: 944 CYSNVKVH 951
+ NV +H
Sbjct: 103 EHGNVPLH 110
Score = 43.5 bits (101), Expect = 7e-04, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 44/92 (47%)
Query: 188 LTALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIE 247
+ LH A G + V + L+ + A N TPLH+A +V+ LL++ A I
Sbjct: 40 FSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADIN 99
Query: 248 ATTEVREPMLHIACKKNRIKVVELLLKHGASI 279
A E LH AC + +V E L+ +GA +
Sbjct: 100 AVNEHGNVPLHYACFWGQDQVAEDLVANGALV 131
Score = 38.9 bits (89), Expect = 0.019, Method: Composition-based stats.
Identities = 37/141 (26%), Positives = 58/141 (41%), Gaps = 29/141 (20%)
Query: 75 RSGHEAVIEMLLEQGAPISSKTKVRGF----YILRSGHEAVIEMLLEQGAPISSKTKVAA 130
R G+ + + L+ ++ GF + R G AV+EML+ +GA I+
Sbjct: 14 REGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARIN------- 66
Query: 131 VLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKAPVDDVTVDYLTA 190
++ G TPLHL +GH + + LLQ KA ++ V
Sbjct: 67 -VMNRGDD---------TPLHLAASHGHRDIVQKLLQY--------KADINAVNEHGNVP 108
Query: 191 LHVAAHCGHARVAKTLLDKKA 211
LH A G +VA+ L+ A
Sbjct: 109 LHYACFWGQDQVAEDLVANGA 129
>pdb|2KBX|A Chain A, Solution Structure Of Ilk-Pinch Complex
Length = 171
Score = 81.3 bits (199), Expect = 4e-15, Method: Composition-based stats.
Identities = 46/107 (42%), Positives = 60/107 (56%), Gaps = 2/107 (1%)
Query: 1256 DQGFTPLHHSAQQGHSTIVALLLDRGASPNATNKG-FTPLHHSAQQGHSTIVALLLDRGA 1314
D GF+PLH + ++G S +V +L+ RGA N N+G TPLH +A GH IV LL A
Sbjct: 32 DHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKA 91
Query: 1315 SPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPL 1361
NA N+ G PLH AC +GQ +A L+ A VS G P+
Sbjct: 92 DINAVNE-HGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPV 137
Score = 68.2 bits (165), Expect = 3e-11, Method: Composition-based stats.
Identities = 38/124 (30%), Positives = 65/124 (52%), Gaps = 3/124 (2%)
Query: 1267 QQGHSTIVALLLDRGASP--NATNKGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRG 1324
++G++ V L LD + + GF+PLH + ++G S +V +L+ RGA N N+
Sbjct: 9 REGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDD 68
Query: 1325 FTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGASPN 1384
TPLH+A +G + + LL A+++ + G PLH++ G + L+ GA +
Sbjct: 69 -TPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVS 127
Query: 1385 ATNK 1388
NK
Sbjct: 128 ICNK 131
Score = 63.2 bits (152), Expect = 1e-09, Method: Composition-based stats.
Identities = 44/137 (32%), Positives = 64/137 (46%), Gaps = 16/137 (11%)
Query: 999 RLGNVDIVMLLLQHGAAVDSTTKDL-------YTALHIAAKEGQEEVAAVLLENGASLTS 1051
R GN V L L D+T DL ++ LH A +EG+ V +L+ GA +
Sbjct: 9 REGNAVAVRLWL------DNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINV 62
Query: 1052 TTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEK 1111
+ TPLHL +GH + + LLQ A ++ ++G PLH A + VA L+
Sbjct: 63 MNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVAN 122
Query: 1112 GASMDIATTLLEYGAKP 1128
GA + I +YG P
Sbjct: 123 GALVSICN---KYGEMP 136
Score = 63.2 bits (152), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/116 (34%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
Query: 198 GHARVAKTLLDK-KADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVREPM 256
G+A + LD + D N +GF+PLH AC++ R VVE+L+ GA I +
Sbjct: 11 GNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTP 70
Query: 257 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 312
LH+A +V+ LL++ A I A E LH AC + +V E L+ +GA +
Sbjct: 71 LHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALV 126
Score = 63.2 bits (152), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 51/95 (53%)
Query: 1135 GFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQV 1194
GF+PLH + EG + + ML+ GA ++ + TPLHL A + + LL+ A +
Sbjct: 34 GFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADI 93
Query: 1195 DTPTKKGFTPLHIACHYGQISMARLLLDQSANVTV 1229
+ + G PLH AC +GQ +A L+ A V++
Sbjct: 94 NAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSI 128
Score = 58.9 bits (141), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/101 (35%), Positives = 54/101 (53%), Gaps = 8/101 (7%)
Query: 146 GFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKAPVDDVTVDYLTALHVAAHCGHARVAKT 205
GF+PLH + G V ++L+ + A ++ + DD T LH+AA GH + +
Sbjct: 34 GFSPLHWACREGRSAVVEMLIMRGARINVMNRG--DD------TPLHLAASHGHRDIVQK 85
Query: 206 LLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASI 246
LL KAD NA +G PLH AC + +V E L+ +GA +
Sbjct: 86 LLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALV 126
Score = 57.0 bits (136), Expect = 7e-08, Method: Composition-based stats.
Identities = 33/105 (31%), Positives = 52/105 (49%)
Query: 992 TPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTS 1051
+PLH A R G +V +L+ GA ++ + T LH+AA G ++ LL+ A + +
Sbjct: 36 SPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINA 95
Query: 1052 TTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVA 1096
+ G PLH +G +VA+ L+ A V K G P+ A
Sbjct: 96 VNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKA 140
Score = 57.0 bits (136), Expect = 8e-08, Method: Composition-based stats.
Identities = 38/121 (31%), Positives = 57/121 (47%), Gaps = 13/121 (10%)
Query: 1088 NGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGH 1147
+G +PLH A V +L+ +GA +++ TPLHL+AS GH
Sbjct: 33 HGFSPLHWACREGRSAVVEMLIMRGARINVMNR-------------GDDTPLHLAASHGH 79
Query: 1148 ADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHI 1207
D+ LL++ AD++ ++G PLH + VAE L+ N A V K G P+
Sbjct: 80 RDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDK 139
Query: 1208 A 1208
A
Sbjct: 140 A 140
Score = 56.6 bits (135), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 3/106 (2%)
Query: 21 NTINPFGSHFQHNITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEA 80
NT N H +PLH A + G++ +V +L+ RGA I+ R T LH AA GH
Sbjct: 22 NTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRD 81
Query: 81 VIEMLLEQGAPISSKTK---VRGFYILRSGHEAVIEMLLEQGAPIS 123
+++ LL+ A I++ + V Y G + V E L+ GA +S
Sbjct: 82 IVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVS 127
Score = 54.7 bits (130), Expect = 4e-07, Method: Composition-based stats.
Identities = 42/144 (29%), Positives = 61/144 (42%), Gaps = 44/144 (30%)
Query: 917 LHIACKKNRIKVVELLLKHGASSHVVSCYSNVKVHVSLNKIQDVSSSILRLATCDVLPQC 976
LH AC++ R VVE+L+ GA
Sbjct: 38 LHWACREGRSAVVEMLIMRGA--------------------------------------- 58
Query: 977 ETRLNFSNLRVREQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQE 1036
R+N N R TPLH+A+ G+ DIV LLQ+ A +++ + LH A GQ+
Sbjct: 59 --RINVMN---RGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQD 113
Query: 1037 EVAAVLLENGASLTSTTKKGFTPL 1060
+VA L+ NGA ++ K G P+
Sbjct: 114 QVAEDLVANGALVSICNKYGEMPV 137
Score = 54.3 bits (129), Expect = 5e-07, Method: Composition-based stats.
Identities = 33/100 (33%), Positives = 50/100 (50%)
Query: 851 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 910
LH AC++ R VVE+L+ GA I + LH+A +V+ LL++ A I A
Sbjct: 38 LHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVN 97
Query: 911 EVREPMLHIACKKNRIKVVELLLKHGASSHVVSCYSNVKV 950
E LH AC + +V E L+ +GA + + Y + V
Sbjct: 98 EHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPV 137
Score = 53.9 bits (128), Expect = 7e-07, Method: Composition-based stats.
Identities = 42/148 (28%), Positives = 61/148 (41%), Gaps = 25/148 (16%)
Query: 1175 CAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFP 1234
C + + V V L ++ GF+PLH AC G+ ++ +L+ + A + V
Sbjct: 8 CREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINV----- 62
Query: 1235 SRXXXXXXXXXXXXXXYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATNK-GFTP 1293
N D TPLH +A GH IV LL A NA N+ G P
Sbjct: 63 -----------------MNRGDD--TPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVP 103
Query: 1294 LHHSAQQGHSTIVALLLDRGASPNATNK 1321
LH++ G + L+ GA + NK
Sbjct: 104 LHYACFWGQDQVAEDLVANGALVSICNK 131
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 46/89 (51%)
Query: 257 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 316
LH AC++ R VVE+L+ GA I + LH+A +V+ LL++ A I A
Sbjct: 38 LHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVN 97
Query: 317 EVREPMLHIACKKNRIKVVELLLKHGASI 345
E LH AC + +V E L+ +GA +
Sbjct: 98 EHGNVPLHYACFWGQDQVAEDLVANGALV 126
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 46/89 (51%)
Query: 290 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 349
LH AC++ R VVE+L+ GA I + LH+A +V+ LL++ A I A
Sbjct: 38 LHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVN 97
Query: 350 EVREPMLHIACKKNRIKVVELLLKHGASI 378
E LH AC + +V E L+ +GA +
Sbjct: 98 EHGNVPLHYACFWGQDQVAEDLVANGALV 126
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 46/89 (51%)
Query: 323 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 382
LH AC++ R VVE+L+ GA I + LH+A +V+ LL++ A I A
Sbjct: 38 LHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVN 97
Query: 383 EVREPMLHIACKKNRIKVVELLLKHGASI 411
E LH AC + +V E L+ +GA +
Sbjct: 98 EHGNVPLHYACFWGQDQVAEDLVANGALV 126
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 46/89 (51%)
Query: 356 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 415
LH AC++ R VVE+L+ GA I + LH+A +V+ LL++ A I A
Sbjct: 38 LHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVN 97
Query: 416 EVREPMLHIACKKNRIKVVELLLKHGASI 444
E LH AC + +V E L+ +GA +
Sbjct: 98 EHGNVPLHYACFWGQDQVAEDLVANGALV 126
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 46/89 (51%)
Query: 389 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 448
LH AC++ R VVE+L+ GA I + LH+A +V+ LL++ A I A
Sbjct: 38 LHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVN 97
Query: 449 EVREPMLHIACKKNRIKVVELLLKHGASI 477
E LH AC + +V E L+ +GA +
Sbjct: 98 EHGNVPLHYACFWGQDQVAEDLVANGALV 126
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 46/89 (51%)
Query: 422 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 481
LH AC++ R VVE+L+ GA I + LH+A +V+ LL++ A I A
Sbjct: 38 LHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVN 97
Query: 482 EVREPMLHIACKKNRIKVVELLLKHGASI 510
E LH AC + +V E L+ +GA +
Sbjct: 98 EHGNVPLHYACFWGQDQVAEDLVANGALV 126
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 46/89 (51%)
Query: 455 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 514
LH AC++ R VVE+L+ GA I + LH+A +V+ LL++ A I A
Sbjct: 38 LHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVN 97
Query: 515 EVREPMLHIACKKNRIKVVELLLKHGASI 543
E LH AC + +V E L+ +GA +
Sbjct: 98 EHGNVPLHYACFWGQDQVAEDLVANGALV 126
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 46/89 (51%)
Query: 488 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 547
LH AC++ R VVE+L+ GA I + LH+A +V+ LL++ A I A
Sbjct: 38 LHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVN 97
Query: 548 EVREPMLHIACKKNRIKVVELLLKHGASI 576
E LH AC + +V E L+ +GA +
Sbjct: 98 EHGNVPLHYACFWGQDQVAEDLVANGALV 126
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 46/89 (51%)
Query: 521 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 580
LH AC++ R VVE+L+ GA I + LH+A +V+ LL++ A I A
Sbjct: 38 LHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVN 97
Query: 581 EVREPMLHIACKKNRIKVVELLLKHGASI 609
E LH AC + +V E L+ +GA +
Sbjct: 98 EHGNVPLHYACFWGQDQVAEDLVANGALV 126
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 46/89 (51%)
Query: 554 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 613
LH AC++ R VVE+L+ GA I + LH+A +V+ LL++ A I A
Sbjct: 38 LHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVN 97
Query: 614 EVREPMLHIACKKNRIKVVELLLKHGASI 642
E LH AC + +V E L+ +GA +
Sbjct: 98 EHGNVPLHYACFWGQDQVAEDLVANGALV 126
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 46/89 (51%)
Query: 587 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 646
LH AC++ R VVE+L+ GA I + LH+A +V+ LL++ A I A
Sbjct: 38 LHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVN 97
Query: 647 EVREPMLHIACKKNRIKVVELLLKHGASI 675
E LH AC + +V E L+ +GA +
Sbjct: 98 EHGNVPLHYACFWGQDQVAEDLVANGALV 126
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 46/89 (51%)
Query: 620 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 679
LH AC++ R VVE+L+ GA I + LH+A +V+ LL++ A I A
Sbjct: 38 LHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVN 97
Query: 680 EVREPMLHIACKKNRIKVVELLLKHGASI 708
E LH AC + +V E L+ +GA +
Sbjct: 98 EHGNVPLHYACFWGQDQVAEDLVANGALV 126
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 46/89 (51%)
Query: 653 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 712
LH AC++ R VVE+L+ GA I + LH+A +V+ LL++ A I A
Sbjct: 38 LHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVN 97
Query: 713 EVREPMLHIACKKNRIKVVELLLKHGASI 741
E LH AC + +V E L+ +GA +
Sbjct: 98 EHGNVPLHYACFWGQDQVAEDLVANGALV 126
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 46/89 (51%)
Query: 686 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 745
LH AC++ R VVE+L+ GA I + LH+A +V+ LL++ A I A
Sbjct: 38 LHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVN 97
Query: 746 EVREPMLHIACKKNRIKVVELLLKHGASI 774
E LH AC + +V E L+ +GA +
Sbjct: 98 EHGNVPLHYACFWGQDQVAEDLVANGALV 126
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 46/89 (51%)
Query: 719 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 778
LH AC++ R VVE+L+ GA I + LH+A +V+ LL++ A I A
Sbjct: 38 LHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVN 97
Query: 779 EVREPMLHIACKKNRIKVVELLLKHGASI 807
E LH AC + +V E L+ +GA +
Sbjct: 98 EHGNVPLHYACFWGQDQVAEDLVANGALV 126
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 46/89 (51%)
Query: 752 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 811
LH AC++ R VVE+L+ GA I + LH+A +V+ LL++ A I A
Sbjct: 38 LHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVN 97
Query: 812 EVREPMLHIACKKNRIKVVELLLKHGASI 840
E LH AC + +V E L+ +GA +
Sbjct: 98 EHGNVPLHYACFWGQDQVAEDLVANGALV 126
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 46/89 (51%)
Query: 785 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 844
LH AC++ R VVE+L+ GA I + LH+A +V+ LL++ A I A
Sbjct: 38 LHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVN 97
Query: 845 EVREPMLHIACKKNRIKVVELLLKHGASI 873
E LH AC + +V E L+ +GA +
Sbjct: 98 EHGNVPLHYACFWGQDQVAEDLVANGALV 126
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 46/89 (51%)
Query: 818 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 877
LH AC++ R VVE+L+ GA I + LH+A +V+ LL++ A I A
Sbjct: 38 LHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVN 97
Query: 878 EVREPMLHIACKKNRIKVVELLLKHGASI 906
E LH AC + +V E L+ +GA +
Sbjct: 98 EHGNVPLHYACFWGQDQVAEDLVANGALV 126
Score = 48.9 bits (115), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/146 (23%), Positives = 61/146 (41%), Gaps = 25/146 (17%)
Query: 1145 EGHADMSAMLLEHGA-DVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFT 1203
EG+A + L++ D++ +G +PLH +E R V E+L+ A+++ + T
Sbjct: 10 EGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDT 69
Query: 1204 PLHIACHYGQISMARLLLDQSANVTVPKNFPSRXXXXXXXXXXXXXXYTNTTDQGFTPLH 1263
PLH+A +G + + LL A++ + G PLH
Sbjct: 70 PLHLAASHGHRDIVQKLLQYKADINA------------------------VNEHGNVPLH 105
Query: 1264 HSAQQGHSTIVALLLDRGASPNATNK 1289
++ G + L+ GA + NK
Sbjct: 106 YACFWGQDQVAEDLVANGALVSICNK 131
Score = 44.7 bits (104), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 40/76 (52%)
Query: 884 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASSHVVS 943
LH AC++ R VVE+L+ GA I + LH+A +V+ LL++ A + V+
Sbjct: 38 LHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVN 97
Query: 944 CYSNVKVHVSLNKIQD 959
+ NV +H + QD
Sbjct: 98 EHGNVPLHYACFWGQD 113
Score = 43.5 bits (101), Expect = 8e-04, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 44/92 (47%)
Query: 188 LTALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIE 247
+ LH A G + V + L+ + A N TPLH+A +V+ LL++ A I
Sbjct: 35 FSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADIN 94
Query: 248 ATTEVREPMLHIACKKNRIKVVELLLKHGASI 279
A E LH AC + +V E L+ +GA +
Sbjct: 95 AVNEHGNVPLHYACFWGQDQVAEDLVANGALV 126
Score = 38.9 bits (89), Expect = 0.019, Method: Composition-based stats.
Identities = 37/141 (26%), Positives = 58/141 (41%), Gaps = 29/141 (20%)
Query: 75 RSGHEAVIEMLLEQGAPISSKTKVRGF----YILRSGHEAVIEMLLEQGAPISSKTKVAA 130
R G+ + + L+ ++ GF + R G AV+EML+ +GA I+
Sbjct: 9 REGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARIN------- 61
Query: 131 VLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKAPVDDVTVDYLTA 190
++ G TPLHL +GH + + LLQ KA ++ V
Sbjct: 62 -VMNRGDD---------TPLHLAASHGHRDIVQKLLQY--------KADINAVNEHGNVP 103
Query: 191 LHVAAHCGHARVAKTLLDKKA 211
LH A G +VA+ L+ A
Sbjct: 104 LHYACFWGQDQVAEDLVANGA 124
>pdb|3ZKJ|A Chain A, Crystal Structure Of Ankyrin Repeat And Socs
Box-containing Protein 9 (asb9) In Complex With Elonginb
And Elonginc
pdb|3ZKJ|D Chain D, Crystal Structure Of Ankyrin Repeat And Socs
Box-containing Protein 9 (asb9) In Complex With Elonginb
And Elonginc
Length = 261
Score = 80.9 bits (198), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 96/202 (47%), Gaps = 3/202 (1%)
Query: 188 LTALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIE 247
+ +H AA GH + L+ + N + +PLH AC + V++LLKHGA +
Sbjct: 4 WSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVN 63
Query: 248 ATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 307
T L AC V LLL+HGAS++ +++ P +H A ++ ++ V L+
Sbjct: 64 GVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASP-IHEAARRGHVECVNSLIA 122
Query: 308 HGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKV 367
+G +I+ L++AC+ + V+ LL+ GA + P LH + ++
Sbjct: 123 YGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQGKGQDSP-LHAVARTASEEL 181
Query: 368 VELLLKHGASIEA-TTEVREPM 388
LL+ GA +A E + P+
Sbjct: 182 ACLLMDFGADTQAKNAEGKRPV 203
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 11/210 (5%)
Query: 147 FTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKAPVDDVTVDYLTALHVAAHCGHARVAKTL 206
++P+H +GH + L+ QG A V+ +T D+++ LH A GH K L
Sbjct: 4 WSPMHEAAIHGHQLSLRNLIS-------QGWA-VNIITADHVSPLHEACLGGHLSCVKIL 55
Query: 207 LDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRI 266
L A N + TPL AC V LLL+HGAS++ +++ P +H A ++ +
Sbjct: 56 LKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASP-IHEAARRGHV 114
Query: 267 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 326
+ V L+ +G +I+ L++AC+ + V+ LL+ GA + P LH
Sbjct: 115 ECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQGKGQDSP-LHAV 173
Query: 327 CKKNRIKVVELLLKHGASIEA-TTEVREPM 355
+ ++ LL+ GA +A E + P+
Sbjct: 174 ARTASEELACLLMDFGADTQAKNAEGKRPV 203
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 96/205 (46%), Gaps = 3/205 (1%)
Query: 218 LNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 277
++ ++P+H A + L+ G ++ T LH AC + V++LLKHGA
Sbjct: 1 MSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGA 60
Query: 278 SIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVEL 337
+ T L AC V LLL+HGAS++ +++ P +H A ++ ++ V
Sbjct: 61 QVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASP-IHEAARRGHVECVNS 119
Query: 338 LLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNR 397
L+ +G +I+ L++AC+ + V+ LL+ GA + P LH +
Sbjct: 120 LIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQGKGQDSP-LHAVARTAS 178
Query: 398 IKVVELLLKHGASIEA-TTEVREPM 421
++ LL+ GA +A E + P+
Sbjct: 179 EELACLLMDFGADTQAKNAEGKRPV 203
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 87/184 (47%), Gaps = 3/184 (1%)
Query: 338 LLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNR 397
L+ G ++ T LH AC + V++LLKHGA + T L AC
Sbjct: 22 LISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGS 81
Query: 398 IKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHI 457
V LLL+HGAS++ +++ P +H A ++ ++ V L+ +G +I+ L++
Sbjct: 82 WDCVNLLLQHGASVQPESDLASP-IHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYL 140
Query: 458 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEA-TTEV 516
AC+ + V+ LL+ GA + P LH + ++ LL+ GA +A E
Sbjct: 141 ACENQQRACVKKLLESGADVNQGKGQDSP-LHAVARTASEELACLLMDFGADTQAKNAEG 199
Query: 517 REPM 520
+ P+
Sbjct: 200 KRPV 203
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 87/184 (47%), Gaps = 3/184 (1%)
Query: 437 LLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNR 496
L+ G ++ T LH AC + V++LLKHGA + T L AC
Sbjct: 22 LISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGS 81
Query: 497 IKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHI 556
V LLL+HGAS++ +++ P +H A ++ ++ V L+ +G +I+ L++
Sbjct: 82 WDCVNLLLQHGASVQPESDLASP-IHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYL 140
Query: 557 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEA-TTEV 615
AC+ + V+ LL+ GA + P LH + ++ LL+ GA +A E
Sbjct: 141 ACENQQRACVKKLLESGADVNQGKGQDSP-LHAVARTASEELACLLMDFGADTQAKNAEG 199
Query: 616 REPM 619
+ P+
Sbjct: 200 KRPV 203
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 87/184 (47%), Gaps = 3/184 (1%)
Query: 536 LLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNR 595
L+ G ++ T LH AC + V++LLKHGA + T L AC
Sbjct: 22 LISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGS 81
Query: 596 IKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHI 655
V LLL+HGAS++ +++ P +H A ++ ++ V L+ +G +I+ L++
Sbjct: 82 WDCVNLLLQHGASVQPESDLASP-IHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYL 140
Query: 656 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEA-TTEV 714
AC+ + V+ LL+ GA + P LH + ++ LL+ GA +A E
Sbjct: 141 ACENQQRACVKKLLESGADVNQGKGQDSP-LHAVARTASEELACLLMDFGADTQAKNAEG 199
Query: 715 REPM 718
+ P+
Sbjct: 200 KRPV 203
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 87/184 (47%), Gaps = 3/184 (1%)
Query: 635 LLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNR 694
L+ G ++ T LH AC + V++LLKHGA + T L AC
Sbjct: 22 LISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGS 81
Query: 695 IKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHI 754
V LLL+HGAS++ +++ P +H A ++ ++ V L+ +G +I+ L++
Sbjct: 82 WDCVNLLLQHGASVQPESDLASP-IHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYL 140
Query: 755 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEA-TTEV 813
AC+ + V+ LL+ GA + P LH + ++ LL+ GA +A E
Sbjct: 141 ACENQQRACVKKLLESGADVNQGKGQDSP-LHAVARTASEELACLLMDFGADTQAKNAEG 199
Query: 814 REPM 817
+ P+
Sbjct: 200 KRPV 203
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 87/184 (47%), Gaps = 3/184 (1%)
Query: 734 LLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNR 793
L+ G ++ T LH AC + V++LLKHGA + T L AC
Sbjct: 22 LISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGS 81
Query: 794 IKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHI 853
V LLL+HGAS++ +++ P +H A ++ ++ V L+ +G +I+ L++
Sbjct: 82 WDCVNLLLQHGASVQPESDLASP-IHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYL 140
Query: 854 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEA-TTEV 912
AC+ + V+ LL+ GA + P LH + ++ LL+ GA +A E
Sbjct: 141 ACENQQRACVKKLLESGADVNQGKGQDSP-LHAVARTASEELACLLMDFGADTQAKNAEG 199
Query: 913 REPM 916
+ P+
Sbjct: 200 KRPV 203
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 101/249 (40%), Gaps = 48/249 (19%)
Query: 833 LLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNR 892
L+ G ++ T LH AC + V++LLKHGA + T L AC
Sbjct: 22 LISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGS 81
Query: 893 IKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASSHVVSCYSNVKVHV 952
V LLL+HGAS++ +++ P +H A ++ ++ V L+ +G
Sbjct: 82 WDCVNLLLQHGASVQPESDLASP-IHEAARRGHVECVNSLIAYGG--------------- 125
Query: 953 SLNKIQDVSSSILRLATCDVLPQCETRLNFSNLRVREQQTPLHIASRLGNVDIVMLLLQH 1012
++ I L TPL++A V LL+
Sbjct: 126 ------NIDHKISHLG-----------------------TPLYLACENQQRACVKKLLES 156
Query: 1013 GAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVA 1072
GA V+ K + LH A+ EE+A +L++ GA + +G P+ L +A
Sbjct: 157 GADVNQ-GKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVPPES--PLA 213
Query: 1073 KLLLQKDAP 1081
+L L+++ P
Sbjct: 214 QLFLEREGP 222
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 85/201 (42%), Gaps = 26/201 (12%)
Query: 1187 LLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRXXXXXXXXXX 1246
L+ V+ T +PLH AC G +S ++LL A V
Sbjct: 22 LISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVN------------------ 63
Query: 1247 XXXXYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATNKGFTPLHHSAQQGHSTIV 1306
T TPL ++ G V LLL GAS + +P+H +A++GH V
Sbjct: 64 ------GVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASPIHEAARRGHVECV 117
Query: 1307 ALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQ 1366
L+ G + + G TPL++AC Q + + LL+ A+V+ Q +PLH A+
Sbjct: 118 NSLIAYGGNIDHKISHLG-TPLYLACENQQRACVKKLLESGADVNQGKGQD-SPLHAVAR 175
Query: 1367 QGHSTIVALLLDRGASPNATN 1387
+ LL+D GA A N
Sbjct: 176 TASEELACLLMDFGADTQAKN 196
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 15/203 (7%)
Query: 1024 YTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVD 1083
++ +H AA G + L+ G ++ T +PLH GH+ K+LL+ A V+
Sbjct: 4 WSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVN 63
Query: 1084 FQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSA 1143
+ TPL A S D LL++GA ES +P+H +A
Sbjct: 64 GVTADWHTPLFNAC-------------VSGSWDCVNLLLQHGASVQPESDLA-SPIHEAA 109
Query: 1144 SEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFT 1203
GH + L+ +G ++ H + TPL+L + + + LL++ A V+ K +
Sbjct: 110 RRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDS 168
Query: 1204 PLHIACHYGQISMARLLLDQSAN 1226
PLH +A LL+D A+
Sbjct: 169 PLHAVARTASEELACLLMDFGAD 191
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 105/254 (41%), Gaps = 32/254 (12%)
Query: 1133 VAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNA 1192
++ ++P+H +A GH L+ G V+ + ++PLH + ++LLK+ A
Sbjct: 1 MSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGA 60
Query: 1193 QVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRXXXXXXXXXXXXXXYT 1252
QV+ T TPL AC G LLL A+V + S
Sbjct: 61 QVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLAS----------------- 103
Query: 1253 NTTDQGFTPLHHSAQQGHSTIVALLLDRGAS-PNATNKGFTPLHHSAQQGHSTIVALLLD 1311
P+H +A++GH V L+ G + + + TPL+ + + V LL+
Sbjct: 104 --------PIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLE 155
Query: 1312 RGASPNATNKTRG-FTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHS 1370
GA N+ +G +PLH +A LL+D A+ +G P+ + S
Sbjct: 156 SGAD---VNQGKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVPPE--S 210
Query: 1371 TIVALLLDRGASPN 1384
+ L L+R P+
Sbjct: 211 PLAQLFLEREGPPS 224
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 91/216 (42%), Gaps = 15/216 (6%)
Query: 992 TPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTS 1051
+P+H A+ G+ + L+ G AV+ T D + LH A G +LL++GA +
Sbjct: 5 SPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNG 64
Query: 1052 TTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEK 1111
T TPL G LLLQ A V + + +P+H A+ H
Sbjct: 65 VTADWHTPLFNACVSGSWDCVNLLLQHGASVQPE-SDLASPIHEAARRGH---------- 113
Query: 1112 GASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTP 1171
++ +L+ YG + + TPL+L+ LLE GADV+ K +P
Sbjct: 114 ---VECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSP 169
Query: 1172 LHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHI 1207
LH A+ +A LL+ A +G P+ +
Sbjct: 170 LHAVARTASEELACLLMDFGADTQAKNAEGKRPVEL 205
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 100/229 (43%), Gaps = 33/229 (14%)
Query: 33 NITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPI 92
+ +P+H AA G + L+S+G ++ T D ++ LH A GH + +++LL+ GA +
Sbjct: 3 DWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQV 62
Query: 93 SSKTKVRG---FYILRSGHEAVIEMLLEQGAPISSKTKVAAVLLENGASLTSTTKKGFTP 149
+ T F SG + +LL+ GA + ++ +A +P
Sbjct: 63 NGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLA------------------SP 104
Query: 150 LHLTGKYGHIKVAKLLLQKDAPVDFQGKAPVDDVTVDYL-TALHVAAHCGHARVAKTLLD 208
+H + GH++ L+ +D + + +L T L++A K LL+
Sbjct: 105 IHEAARRGHVECVNSLIAYGGNIDHK---------ISHLGTPLYLACENQQRACVKKLLE 155
Query: 209 KKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEA-TTEVREPM 256
AD N + +PLH + ++ LL+ GA +A E + P+
Sbjct: 156 SGADVN-QGKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPV 203
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 64/137 (46%), Gaps = 17/137 (12%)
Query: 35 TPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISS 94
+P+H AA+ G V L++ G NID+K T L+ A + A ++ LLE GA ++
Sbjct: 103 SPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ 162
Query: 95 KTKVRGFYILRSGHEAVIEMLLEQGAPISSKTKVAAVLLENGASLTSTTKKGFTPLHLTG 154
G ++ + + ++ ++A +L++ GA + +G P+ L
Sbjct: 163 G----------KGQDSPLHAVAR-----TASEELACLLMDFGADTQAKNAEGKRPVELVP 207
Query: 155 KYGHIKVAKLLLQKDAP 171
+A+L L+++ P
Sbjct: 208 PES--PLAQLFLEREGP 222
>pdb|2V4H|C Chain C, Nemo Cc2-Lz Domain - 1d5 Darpin Complex
pdb|2V4H|D Chain D, Nemo Cc2-Lz Domain - 1d5 Darpin Complex
Length = 136
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 73/133 (54%), Gaps = 13/133 (9%)
Query: 1022 DLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAP 1081
DL L AA+ GQ++ +L+ NGA + + +KG TPLHL Y H+++ ++LL+ A
Sbjct: 13 DLGKKLLEAARAGQDDEVRILMANGADVNANDRKGNTPLHLAADYDHLEIVEVLLKHGAD 72
Query: 1082 VDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHL 1141
V+ +G TPLH+A+ + H ++I LL++GA NA+ G T +
Sbjct: 73 VNAHDNDGSTPLHLAALFGH-------------LEIVEVLLKHGADVNAQDKFGKTAFDI 119
Query: 1142 SASEGHADMSAML 1154
S G+ D++ +L
Sbjct: 120 SIDNGNEDLAEIL 132
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 59/114 (51%)
Query: 194 AAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVR 253
AA G + L+ AD NA G TPLH+A + +++VE+LLKHGA + A
Sbjct: 21 AARAGQDDEVRILMANGADVNANDRKGNTPLHLAADYDHLEIVEVLLKHGADVNAHDNDG 80
Query: 254 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 307
LH+A +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 81 STPLHLAALFGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 60/115 (52%)
Query: 1106 LLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAA 1165
LL + D L+ GA NA G TPLHL+A H ++ +LL+HGADV+
Sbjct: 18 LLEAARAGQDDEVRILMANGADVNANDRKGNTPLHLAADYDHLEIVEVLLKHGADVNAHD 77
Query: 1166 KNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLL 1220
+G TPLHL A + + E+LLK+ A V+ K G T I+ G +A +L
Sbjct: 78 NDGSTPLHLAALFGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEIL 132
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 65/127 (51%), Gaps = 13/127 (10%)
Query: 1065 KYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEY 1124
+ G ++L+ A V+ + G TPLH+A+ YDH ++I LL++
Sbjct: 23 RAGQDDEVRILMANGADVNANDRKGNTPLHLAADYDH-------------LEIVEVLLKH 69
Query: 1125 GAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVA 1184
GA NA G TPLHL+A GH ++ +LL+HGADV+ K G T + +A
Sbjct: 70 GADVNAHDNDGSTPLHLAALFGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLA 129
Query: 1185 ELLLKNN 1191
E+L K N
Sbjct: 130 EILQKLN 136
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 66/112 (58%)
Query: 997 ASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKG 1056
A+R G D V +L+ +GA V++ + T LH+AA E+ VLL++GA + + G
Sbjct: 21 AARAGQDDEVRILMANGADVNANDRKGNTPLHLAADYDHLEIVEVLLKHGADVNAHDNDG 80
Query: 1057 FTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLL 1108
TPLHL +GH+++ ++LL+ A V+ Q K G T ++ ++++A +L
Sbjct: 81 STPLHLAALFGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEIL 132
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%)
Query: 227 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 286
A + + V +L+ +GA + A LH+A + +++VE+LLKHGA + A
Sbjct: 21 AARAGQDDEVRILMANGADVNANDRKGNTPLHLAADYDHLEIVEVLLKHGADVNAHDNDG 80
Query: 287 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 340
LH+A +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 81 STPLHLAALFGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%)
Query: 260 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 319
A + + V +L+ +GA + A LH+A + +++VE+LLKHGA + A
Sbjct: 21 AARAGQDDEVRILMANGADVNANDRKGNTPLHLAADYDHLEIVEVLLKHGADVNAHDNDG 80
Query: 320 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 373
LH+A +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 81 STPLHLAALFGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%)
Query: 293 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 352
A + + V +L+ +GA + A LH+A + +++VE+LLKHGA + A
Sbjct: 21 AARAGQDDEVRILMANGADVNANDRKGNTPLHLAADYDHLEIVEVLLKHGADVNAHDNDG 80
Query: 353 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 406
LH+A +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 81 STPLHLAALFGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%)
Query: 326 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 385
A + + V +L+ +GA + A LH+A + +++VE+LLKHGA + A
Sbjct: 21 AARAGQDDEVRILMANGADVNANDRKGNTPLHLAADYDHLEIVEVLLKHGADVNAHDNDG 80
Query: 386 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 439
LH+A +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 81 STPLHLAALFGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%)
Query: 359 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 418
A + + V +L+ +GA + A LH+A + +++VE+LLKHGA + A
Sbjct: 21 AARAGQDDEVRILMANGADVNANDRKGNTPLHLAADYDHLEIVEVLLKHGADVNAHDNDG 80
Query: 419 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 472
LH+A +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 81 STPLHLAALFGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%)
Query: 392 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 451
A + + V +L+ +GA + A LH+A + +++VE+LLKHGA + A
Sbjct: 21 AARAGQDDEVRILMANGADVNANDRKGNTPLHLAADYDHLEIVEVLLKHGADVNAHDNDG 80
Query: 452 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 505
LH+A +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 81 STPLHLAALFGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%)
Query: 425 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 484
A + + V +L+ +GA + A LH+A + +++VE+LLKHGA + A
Sbjct: 21 AARAGQDDEVRILMANGADVNANDRKGNTPLHLAADYDHLEIVEVLLKHGADVNAHDNDG 80
Query: 485 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 538
LH+A +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 81 STPLHLAALFGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%)
Query: 458 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 517
A + + V +L+ +GA + A LH+A + +++VE+LLKHGA + A
Sbjct: 21 AARAGQDDEVRILMANGADVNANDRKGNTPLHLAADYDHLEIVEVLLKHGADVNAHDNDG 80
Query: 518 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 571
LH+A +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 81 STPLHLAALFGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%)
Query: 491 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 550
A + + V +L+ +GA + A LH+A + +++VE+LLKHGA + A
Sbjct: 21 AARAGQDDEVRILMANGADVNANDRKGNTPLHLAADYDHLEIVEVLLKHGADVNAHDNDG 80
Query: 551 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 604
LH+A +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 81 STPLHLAALFGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%)
Query: 524 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 583
A + + V +L+ +GA + A LH+A + +++VE+LLKHGA + A
Sbjct: 21 AARAGQDDEVRILMANGADVNANDRKGNTPLHLAADYDHLEIVEVLLKHGADVNAHDNDG 80
Query: 584 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 637
LH+A +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 81 STPLHLAALFGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%)
Query: 557 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 616
A + + V +L+ +GA + A LH+A + +++VE+LLKHGA + A
Sbjct: 21 AARAGQDDEVRILMANGADVNANDRKGNTPLHLAADYDHLEIVEVLLKHGADVNAHDNDG 80
Query: 617 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 670
LH+A +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 81 STPLHLAALFGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%)
Query: 590 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 649
A + + V +L+ +GA + A LH+A + +++VE+LLKHGA + A
Sbjct: 21 AARAGQDDEVRILMANGADVNANDRKGNTPLHLAADYDHLEIVEVLLKHGADVNAHDNDG 80
Query: 650 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 703
LH+A +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 81 STPLHLAALFGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%)
Query: 623 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 682
A + + V +L+ +GA + A LH+A + +++VE+LLKHGA + A
Sbjct: 21 AARAGQDDEVRILMANGADVNANDRKGNTPLHLAADYDHLEIVEVLLKHGADVNAHDNDG 80
Query: 683 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 736
LH+A +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 81 STPLHLAALFGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%)
Query: 656 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 715
A + + V +L+ +GA + A LH+A + +++VE+LLKHGA + A
Sbjct: 21 AARAGQDDEVRILMANGADVNANDRKGNTPLHLAADYDHLEIVEVLLKHGADVNAHDNDG 80
Query: 716 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 769
LH+A +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 81 STPLHLAALFGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%)
Query: 689 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 748
A + + V +L+ +GA + A LH+A + +++VE+LLKHGA + A
Sbjct: 21 AARAGQDDEVRILMANGADVNANDRKGNTPLHLAADYDHLEIVEVLLKHGADVNAHDNDG 80
Query: 749 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 802
LH+A +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 81 STPLHLAALFGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%)
Query: 722 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 781
A + + V +L+ +GA + A LH+A + +++VE+LLKHGA + A
Sbjct: 21 AARAGQDDEVRILMANGADVNANDRKGNTPLHLAADYDHLEIVEVLLKHGADVNAHDNDG 80
Query: 782 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 835
LH+A +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 81 STPLHLAALFGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%)
Query: 755 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 814
A + + V +L+ +GA + A LH+A + +++VE+LLKHGA + A
Sbjct: 21 AARAGQDDEVRILMANGADVNANDRKGNTPLHLAADYDHLEIVEVLLKHGADVNAHDNDG 80
Query: 815 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 868
LH+A +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 81 STPLHLAALFGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%)
Query: 788 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 847
A + + V +L+ +GA + A LH+A + +++VE+LLKHGA + A
Sbjct: 21 AARAGQDDEVRILMANGADVNANDRKGNTPLHLAADYDHLEIVEVLLKHGADVNAHDNDG 80
Query: 848 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 901
LH+A +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 81 STPLHLAALFGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%)
Query: 821 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 880
A + + V +L+ +GA + A LH+A + +++VE+LLKHGA + A
Sbjct: 21 AARAGQDDEVRILMANGADVNANDRKGNTPLHLAADYDHLEIVEVLLKHGADVNAHDNDG 80
Query: 881 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 934
LH+A +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 81 STPLHLAALFGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 51/92 (55%)
Query: 1142 SASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKG 1201
+A G D +L+ +GADV+ + G TPLHL A D + + E+LLK+ A V+ G
Sbjct: 21 AARAGQDDEVRILMANGADVNANDRKGNTPLHLAADYDHLEIVEVLLKHGADVNAHDNDG 80
Query: 1202 FTPLHIACHYGQISMARLLLDQSANVTVPKNF 1233
TPLH+A +G + + +LL A+V F
Sbjct: 81 STPLHLAALFGHLEIVEVLLKHGADVNAQDKF 112
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Query: 1297 SAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQ 1356
+A+ G V +L+ GA NA N +G TPLH+A Y + + +LL A+V+ +
Sbjct: 21 AARAGQDDEVRILMANGADVNA-NDRKGNTPLHLAADYDHLEIVEVLLKHGADVNAHDND 79
Query: 1357 GFTPLHHSAQQGHSTIVALLLDRGASPNATNK 1388
G TPLH +A GH IV +LL GA NA +K
Sbjct: 80 GSTPLHLAALFGHLEIVEVLLKHGADVNAQDK 111
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 58/113 (51%), Gaps = 2/113 (1%)
Query: 1265 SAQQGHSTIVALLLDRGASPNATN-KGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTR 1323
+A+ G V +L+ GA NA + KG TPLH +A H IV +LL GA NA +
Sbjct: 21 AARAGQDDEVRILMANGADVNANDRKGNTPLHLAADYDHLEIVEVLLKHGADVNAHDND- 79
Query: 1324 GFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALL 1376
G TPLH+A +G + + +LL A+V+ G T S G+ + +L
Sbjct: 80 GSTPLHLAALFGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEIL 132
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 56/114 (49%), Gaps = 14/114 (12%)
Query: 131 VLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPV---DFQGKAPVDDVTVDY 187
+L+ NGA + + +KG TPLHL Y H+++ ++LL+ A V D G P
Sbjct: 32 ILMANGADVNANDRKGNTPLHLAADYDHLEIVEVLLKHGADVNAHDNDGSTP-------- 83
Query: 188 LTALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLK 241
LH+AA GH + + LL AD NA+ G T I+ + E+L K
Sbjct: 84 ---LHLAALFGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 58/113 (51%)
Query: 854 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 913
A + + V +L+ +GA + A LH+A + +++VE+LLKHGA + A
Sbjct: 21 AARAGQDDEVRILMANGADVNANDRKGNTPLHLAADYDHLEIVEVLLKHGADVNAHDNDG 80
Query: 914 EPMLHIACKKNRIKVVELLLKHGASSHVVSCYSNVKVHVSLNKIQDVSSSILR 966
LH+A +++VE+LLKHGA + + +S++ + + IL+
Sbjct: 81 STPLHLAALFGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQ 133
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 56/92 (60%)
Query: 984 NLRVREQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLL 1043
N R+ TPLH+A+ +++IV +LL+HGA V++ D T LH+AA G E+ VLL
Sbjct: 41 NANDRKGNTPLHLAADYDHLEIVEVLLKHGADVNAHDNDGSTPLHLAALFGHLEIVEVLL 100
Query: 1044 ENGASLTSTTKKGFTPLHLTGKYGHIKVAKLL 1075
++GA + + K G T ++ G+ +A++L
Sbjct: 101 KHGADVNAQDKFGKTAFDISIDNGNEDLAEIL 132
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 1253 NTTD-QGFTPLHHSAQQGHSTIVALLLDRGASPNA-TNKGFTPLHHSAQQGHSTIVALLL 1310
N D +G TPLH +A H IV +LL GA NA N G TPLH +A GH IV +LL
Sbjct: 41 NANDRKGNTPLHLAADYDHLEIVEVLLKHGADVNAHDNDGSTPLHLAALFGHLEIVEVLL 100
Query: 1311 DRGASPNATNKTRGFTPLHIACHYGQISMARLL 1343
GA NA +K G T I+ G +A +L
Sbjct: 101 KHGADVNAQDKF-GKTAFDISIDNGNEDLAEIL 132
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%)
Query: 189 TALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEA 248
T LH+AA H + + LL AD NA +G TPLH+A +++VE+LLKHGA + A
Sbjct: 49 TPLHLAADYDHLEIVEVLLKHGADVNAHDNDGSTPLHLAALFGHLEIVEVLLKHGADVNA 108
Query: 249 TTEVREPMLHIACKKNRIKVVELLLK 274
+ + I+ + E+L K
Sbjct: 109 QDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 57.0 bits (136), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 58/136 (42%), Gaps = 28/136 (20%)
Query: 1175 CAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFP 1234
Q+D V +L+ N A V+ +KG TPLH+A Y + + +LL A+V N
Sbjct: 24 AGQDDEV---RILMANGADVNANDRKGNTPLHLAADYDHLEIVEVLLKHGADVNAHDN-- 78
Query: 1235 SRXXXXXXXXXXXXXXYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATNK-GFTP 1293
G TPLH +A GH IV +LL GA NA +K G T
Sbjct: 79 ----------------------DGSTPLHLAALFGHLEIVEVLLKHGADVNAQDKFGKTA 116
Query: 1294 LHHSAQQGHSTIVALL 1309
S G+ + +L
Sbjct: 117 FDISIDNGNEDLAEIL 132
Score = 57.0 bits (136), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 52/84 (61%), Gaps = 3/84 (3%)
Query: 35 TPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISS 94
TPLH+AA + +V +LL GA+++ DG T LH AA GH ++E+LL+ GA +++
Sbjct: 49 TPLHLAADYDHLEIVEVLLKHGADVNAHDNDGSTPLHLAALFGHLEIVEVLLKHGADVNA 108
Query: 95 KTKV--RGFYI-LRSGHEAVIEML 115
+ K F I + +G+E + E+L
Sbjct: 109 QDKFGKTAFDISIDNGNEDLAEIL 132
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 40 AAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISSKTKVR 99
AA+ G+ + V +L++ GA+++ R G T LH AA H ++E+LL+ GA +++
Sbjct: 21 AARAGQDDEVRILMANGADVNANDRKGNTPLHLAADYDHLEIVEVLLKHGADVNAHDN-D 79
Query: 100 GFYILR----SGHEAVIEMLLEQGAPISSKTKVA 129
G L GH ++E+LL+ GA ++++ K
Sbjct: 80 GSTPLHLAALFGHLEIVEVLLKHGADVNAQDKFG 113
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 16/89 (17%)
Query: 105 RSGHEAVIEMLLEQGAPISSKTK----------------VAAVLLENGASLTSTTKKGFT 148
R+G + + +L+ GA +++ + + VLL++GA + + G T
Sbjct: 23 RAGQDDEVRILMANGADVNANDRKGNTPLHLAADYDHLEIVEVLLKHGADVNAHDNDGST 82
Query: 149 PLHLTGKYGHIKVAKLLLQKDAPVDFQGK 177
PLHL +GH+++ ++LL+ A V+ Q K
Sbjct: 83 PLHLAALFGHLEIVEVLLKHGADVNAQDK 111
Score = 39.7 bits (91), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%)
Query: 28 SHFQHNITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEML 85
+H TPLH+AA +G +V +LL GA+++ + + G TA + +G+E + E+L
Sbjct: 75 AHDNDGSTPLHLAALFGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEIL 132
>pdb|3TWQ|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 (Apo Form)
pdb|3TWQ|B Chain B, Crystal Structure Of Arc4 From Human Tankyrase 2 (Apo Form)
Length = 175
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 74/142 (52%), Gaps = 14/142 (9%)
Query: 1058 TPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDI 1117
TPLH Y + V + LLQ A V + K G+ PLH A Y H VA LL++ GA +++
Sbjct: 48 TPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNV 107
Query: 1118 ATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQ 1177
A + FTPLH +A++G ++ +LL+HGAD + ++G TPL L
Sbjct: 108 A-------------DLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD 154
Query: 1178 EDRVGVAELLLKNNAQVDTPTK 1199
D + +LL + A +D K
Sbjct: 155 GD-TDIQDLLRGDAALLDAAKK 175
Score = 73.2 bits (178), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 66/153 (43%), Gaps = 26/153 (16%)
Query: 1170 TPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTV 1229
TPLH A +RV V E LL++ A V K G PLH AC YG +A LL+ A V V
Sbjct: 48 TPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNV 107
Query: 1230 PKNFPSRXXXXXXXXXXXXXXYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATNK 1289
+ FTPLH +A +G I LLL GA P N+
Sbjct: 108 ADLWK------------------------FTPLHEAAAKGKYEICKLLLQHGADPTKKNR 143
Query: 1290 -GFTPLHHSAQQGHSTIVALLLDRGASPNATNK 1321
G TPL + G + I LL A +A K
Sbjct: 144 DGNTPL-DLVKDGDTDIQDLLRGDAALLDAAKK 175
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 71/134 (52%), Gaps = 4/134 (2%)
Query: 214 NARALNG--FTPLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVEL 271
N R + G TPLH A NR+ VVE LL+HGA + A + LH AC +V EL
Sbjct: 38 NCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAEL 97
Query: 272 LLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNR 331
L+KHGA + + LH A K + ++ +LLL+HGA + T + R+ + K+
Sbjct: 98 LVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGA--DPTKKNRDGNTPLDLVKDG 155
Query: 332 IKVVELLLKHGASI 345
++ LL+ A++
Sbjct: 156 DTDIQDLLRGDAAL 169
Score = 70.5 bits (171), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 65/129 (50%), Gaps = 1/129 (0%)
Query: 990 QQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASL 1049
Q TPLH A+ V +V LLQHGA V + K LH A G EVA +L+++GA +
Sbjct: 46 QSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVV 105
Query: 1050 TSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLL 1109
FTPLH G ++ KLLLQ A + ++G TPL + D ++ LL
Sbjct: 106 NVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKDGD-TDIQDLLR 164
Query: 1110 EKGASMDIA 1118
A +D A
Sbjct: 165 GDAALLDAA 173
Score = 70.1 bits (170), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 51/97 (52%), Gaps = 1/97 (1%)
Query: 1292 TPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVS 1351
TPLH +A ++V LL GA +A +K G PLH AC YG +A LL+ A V+
Sbjct: 48 TPLHFAAGYNRVSVVEYLLQHGADVHAKDKG-GLVPLHNACSYGHYEVAELLVKHGAVVN 106
Query: 1352 CTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATNK 1388
FTPLH +A +G I LLL GA P N+
Sbjct: 107 VADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNR 143
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 290 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 349
LH A NR+ VVE LL+HGA + A + LH AC +V ELL+KHGA +
Sbjct: 50 LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD 109
Query: 350 EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 409
+ LH A K + ++ +LLL+HGA + T + R+ + K+ ++ LL+ A
Sbjct: 110 LWKFTPLHEAAAKGKYEICKLLLQHGA--DPTKKNRDGNTPLDLVKDGDTDIQDLLRGDA 167
Query: 410 SI 411
++
Sbjct: 168 AL 169
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 323 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 382
LH A NR+ VVE LL+HGA + A + LH AC +V ELL+KHGA +
Sbjct: 50 LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD 109
Query: 383 EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 442
+ LH A K + ++ +LLL+HGA + T + R+ + K+ ++ LL+ A
Sbjct: 110 LWKFTPLHEAAAKGKYEICKLLLQHGA--DPTKKNRDGNTPLDLVKDGDTDIQDLLRGDA 167
Query: 443 SI 444
++
Sbjct: 168 AL 169
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 356 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 415
LH A NR+ VVE LL+HGA + A + LH AC +V ELL+KHGA +
Sbjct: 50 LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD 109
Query: 416 EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 475
+ LH A K + ++ +LLL+HGA + T + R+ + K+ ++ LL+ A
Sbjct: 110 LWKFTPLHEAAAKGKYEICKLLLQHGA--DPTKKNRDGNTPLDLVKDGDTDIQDLLRGDA 167
Query: 476 SI 477
++
Sbjct: 168 AL 169
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 389 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 448
LH A NR+ VVE LL+HGA + A + LH AC +V ELL+KHGA +
Sbjct: 50 LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD 109
Query: 449 EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 508
+ LH A K + ++ +LLL+HGA + T + R+ + K+ ++ LL+ A
Sbjct: 110 LWKFTPLHEAAAKGKYEICKLLLQHGA--DPTKKNRDGNTPLDLVKDGDTDIQDLLRGDA 167
Query: 509 SI 510
++
Sbjct: 168 AL 169
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 422 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 481
LH A NR+ VVE LL+HGA + A + LH AC +V ELL+KHGA +
Sbjct: 50 LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD 109
Query: 482 EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 541
+ LH A K + ++ +LLL+HGA + T + R+ + K+ ++ LL+ A
Sbjct: 110 LWKFTPLHEAAAKGKYEICKLLLQHGA--DPTKKNRDGNTPLDLVKDGDTDIQDLLRGDA 167
Query: 542 SI 543
++
Sbjct: 168 AL 169
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 455 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 514
LH A NR+ VVE LL+HGA + A + LH AC +V ELL+KHGA +
Sbjct: 50 LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD 109
Query: 515 EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 574
+ LH A K + ++ +LLL+HGA + T + R+ + K+ ++ LL+ A
Sbjct: 110 LWKFTPLHEAAAKGKYEICKLLLQHGA--DPTKKNRDGNTPLDLVKDGDTDIQDLLRGDA 167
Query: 575 SI 576
++
Sbjct: 168 AL 169
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 488 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 547
LH A NR+ VVE LL+HGA + A + LH AC +V ELL+KHGA +
Sbjct: 50 LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD 109
Query: 548 EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 607
+ LH A K + ++ +LLL+HGA + T + R+ + K+ ++ LL+ A
Sbjct: 110 LWKFTPLHEAAAKGKYEICKLLLQHGA--DPTKKNRDGNTPLDLVKDGDTDIQDLLRGDA 167
Query: 608 SI 609
++
Sbjct: 168 AL 169
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 521 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 580
LH A NR+ VVE LL+HGA + A + LH AC +V ELL+KHGA +
Sbjct: 50 LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD 109
Query: 581 EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 640
+ LH A K + ++ +LLL+HGA + T + R+ + K+ ++ LL+ A
Sbjct: 110 LWKFTPLHEAAAKGKYEICKLLLQHGA--DPTKKNRDGNTPLDLVKDGDTDIQDLLRGDA 167
Query: 641 SI 642
++
Sbjct: 168 AL 169
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 554 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 613
LH A NR+ VVE LL+HGA + A + LH AC +V ELL+KHGA +
Sbjct: 50 LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD 109
Query: 614 EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 673
+ LH A K + ++ +LLL+HGA + T + R+ + K+ ++ LL+ A
Sbjct: 110 LWKFTPLHEAAAKGKYEICKLLLQHGA--DPTKKNRDGNTPLDLVKDGDTDIQDLLRGDA 167
Query: 674 SI 675
++
Sbjct: 168 AL 169
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 587 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 646
LH A NR+ VVE LL+HGA + A + LH AC +V ELL+KHGA +
Sbjct: 50 LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD 109
Query: 647 EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 706
+ LH A K + ++ +LLL+HGA + T + R+ + K+ ++ LL+ A
Sbjct: 110 LWKFTPLHEAAAKGKYEICKLLLQHGA--DPTKKNRDGNTPLDLVKDGDTDIQDLLRGDA 167
Query: 707 SI 708
++
Sbjct: 168 AL 169
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 620 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 679
LH A NR+ VVE LL+HGA + A + LH AC +V ELL+KHGA +
Sbjct: 50 LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD 109
Query: 680 EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 739
+ LH A K + ++ +LLL+HGA + T + R+ + K+ ++ LL+ A
Sbjct: 110 LWKFTPLHEAAAKGKYEICKLLLQHGA--DPTKKNRDGNTPLDLVKDGDTDIQDLLRGDA 167
Query: 740 SI 741
++
Sbjct: 168 AL 169
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 653 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 712
LH A NR+ VVE LL+HGA + A + LH AC +V ELL+KHGA +
Sbjct: 50 LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD 109
Query: 713 EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 772
+ LH A K + ++ +LLL+HGA + T + R+ + K+ ++ LL+ A
Sbjct: 110 LWKFTPLHEAAAKGKYEICKLLLQHGA--DPTKKNRDGNTPLDLVKDGDTDIQDLLRGDA 167
Query: 773 SI 774
++
Sbjct: 168 AL 169
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 686 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 745
LH A NR+ VVE LL+HGA + A + LH AC +V ELL+KHGA +
Sbjct: 50 LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD 109
Query: 746 EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 805
+ LH A K + ++ +LLL+HGA + T + R+ + K+ ++ LL+ A
Sbjct: 110 LWKFTPLHEAAAKGKYEICKLLLQHGA--DPTKKNRDGNTPLDLVKDGDTDIQDLLRGDA 167
Query: 806 SI 807
++
Sbjct: 168 AL 169
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 719 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 778
LH A NR+ VVE LL+HGA + A + LH AC +V ELL+KHGA +
Sbjct: 50 LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD 109
Query: 779 EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 838
+ LH A K + ++ +LLL+HGA + T + R+ + K+ ++ LL+ A
Sbjct: 110 LWKFTPLHEAAAKGKYEICKLLLQHGA--DPTKKNRDGNTPLDLVKDGDTDIQDLLRGDA 167
Query: 839 SI 840
++
Sbjct: 168 AL 169
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 752 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 811
LH A NR+ VVE LL+HGA + A + LH AC +V ELL+KHGA +
Sbjct: 50 LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD 109
Query: 812 EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 871
+ LH A K + ++ +LLL+HGA + T + R+ + K+ ++ LL+ A
Sbjct: 110 LWKFTPLHEAAAKGKYEICKLLLQHGA--DPTKKNRDGNTPLDLVKDGDTDIQDLLRGDA 167
Query: 872 SI 873
++
Sbjct: 168 AL 169
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 785 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 844
LH A NR+ VVE LL+HGA + A + LH AC +V ELL+KHGA +
Sbjct: 50 LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD 109
Query: 845 EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 904
+ LH A K + ++ +LLL+HGA + T + R+ + K+ ++ LL+ A
Sbjct: 110 LWKFTPLHEAAAKGKYEICKLLLQHGA--DPTKKNRDGNTPLDLVKDGDTDIQDLLRGDA 167
Query: 905 SI 906
++
Sbjct: 168 AL 169
Score = 66.6 bits (161), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 49/88 (55%)
Query: 851 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 910
LH A NR+ VVE LL+HGA + A + LH AC +V ELL+KHGA +
Sbjct: 50 LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD 109
Query: 911 EVREPMLHIACKKNRIKVVELLLKHGAS 938
+ LH A K + ++ +LLL+HGA
Sbjct: 110 LWKFTPLHEAAAKGKYEICKLLLQHGAD 137
Score = 63.9 bits (154), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 48/92 (52%)
Query: 1137 TPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDT 1196
TPLH +A + LL+HGADV K GL PLH VAELL+K+ A V+
Sbjct: 48 TPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNV 107
Query: 1197 PTKKGFTPLHIACHYGQISMARLLLDQSANVT 1228
FTPLH A G+ + +LLL A+ T
Sbjct: 108 ADLWKFTPLHEAAAKGKYEICKLLLQHGADPT 139
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 1260 TPLHHSAQQGHSTIVALLLDRGASPNATNKG-FTPLHHSAQQGHSTIVALLLDRGASPNA 1318
TPLH +A ++V LL GA +A +KG PLH++ GH + LL+ GA N
Sbjct: 48 TPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNV 107
Query: 1319 TNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLD 1378
+ + FTPLH A G+ + +LLL A+ + G TPL + G + I LL
Sbjct: 108 ADLWK-FTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPL-DLVKDGDTDIQDLLRG 165
Query: 1379 RGASPNATNK 1388
A +A K
Sbjct: 166 DAALLDAAKK 175
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 67/139 (48%), Gaps = 15/139 (10%)
Query: 35 TPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISS 94
TPLH AA + + ++V LL GA++ K + GL LH A GH V E+L++ GA ++
Sbjct: 48 TPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVN- 106
Query: 95 KTKVRGFYILRSGHEAVIEMLLEQGAPISSKTKVAAVLLENGASLTSTTKKGFTPLHLTG 154
V + HEA + K ++ +LL++GA T + G TPL L
Sbjct: 107 ---VADLWKFTPLHEAAAK----------GKYEICKLLLQHGADPTKKNRDGNTPLDLV- 152
Query: 155 KYGHIKVAKLLLQKDAPVD 173
K G + LL A +D
Sbjct: 153 KDGDTDIQDLLRGDAALLD 171
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 69/171 (40%), Gaps = 45/171 (26%)
Query: 884 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASSHVVS 943
LH A NR+ VVE LL+HGA + A + LH AC +V ELL+KHGA +V
Sbjct: 50 LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD 109
Query: 944 CYSNVKVHVSLNKIQDVSSSILRLATCDVLPQCETRLNFSNLRVREQQTPLHIASRLGNV 1003
+ + TPLH A+ G
Sbjct: 110 LW--------------------------------------------KFTPLHEAAAKGKY 125
Query: 1004 DIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTK 1054
+I LLLQHGA +D T L + K+G ++ +L + A L + K
Sbjct: 126 EICKLLLQHGADPTKKNRDGNTPLDL-VKDGDTDIQDLLRGDAALLDAAKK 175
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 63/124 (50%), Gaps = 2/124 (1%)
Query: 189 TALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEA 248
T LH AA V + LL AD +A+ G PLH AC +V ELL+KHGA +
Sbjct: 48 TPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNV 107
Query: 249 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 308
+ LH A K + ++ +LLL+HGA + T + R+ + K+ ++ LL+
Sbjct: 108 ADLWKFTPLHEAAAKGKYEICKLLLQHGA--DPTKKNRDGNTPLDLVKDGDTDIQDLLRG 165
Query: 309 GASI 312
A++
Sbjct: 166 DAAL 169
Score = 60.8 bits (146), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 65/125 (52%), Gaps = 14/125 (11%)
Query: 1083 DFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLS 1142
D +G+ TPLH A+ Y+ + + LL++GA +A+ G PLH +
Sbjct: 41 DIEGRQS-TPLHFAAGYNR-------------VSVVEYLLQHGADVHAKDKGGLVPLHNA 86
Query: 1143 ASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGF 1202
S GH +++ +L++HGA V+ A TPLH A + + + +LLL++ A + G
Sbjct: 87 CSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGN 146
Query: 1203 TPLHI 1207
TPL +
Sbjct: 147 TPLDL 151
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 63/132 (47%), Gaps = 10/132 (7%)
Query: 148 TPLHLTGKYGHIKVAKLLLQKDAPVDFQGKAPVDDVTVDYLTALHVAAHCGHARVAKTLL 207
TPLH Y + V + LLQ A V + K L LH A GH VA+ L+
Sbjct: 48 TPLHFAAGYNRVSVVEYLLQHGADVHAKDKGG--------LVPLHNACSYGHYEVAELLV 99
Query: 208 DKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIK 267
A N L FTPLH A K + ++ +LLL+HGA + T + R+ + K+
Sbjct: 100 KHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGA--DPTKKNRDGNTPLDLVKDGDT 157
Query: 268 VVELLLKHGASI 279
++ LL+ A++
Sbjct: 158 DIQDLLRGDAAL 169
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 62/125 (49%), Gaps = 9/125 (7%)
Query: 124 SKTKVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKAPVDDV 183
++ V LL++GA + + K G PLH YGH +VA+LL++ A V+ V D+
Sbjct: 57 NRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVN------VADL 110
Query: 184 TVDYLTALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHG 243
T LH AA G + K LL ADP + +G TPL + K + +LL
Sbjct: 111 W--KFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLV-KDGDTDIQDLLRGDA 167
Query: 244 ASIEA 248
A ++A
Sbjct: 168 ALLDA 172
Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 32/65 (49%)
Query: 1323 RGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGAS 1382
R TPLH A Y ++S+ LL A+V G PLH++ GH + LL+ GA
Sbjct: 45 RQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAV 104
Query: 1383 PNATN 1387
N +
Sbjct: 105 VNVAD 109
Score = 33.9 bits (76), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%)
Query: 33 NITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPI 92
+ PLH A +G + LL+ GA ++ T LH AA G + ++LL+ GA
Sbjct: 79 GLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADP 138
Query: 93 SSKTK 97
+ K +
Sbjct: 139 TKKNR 143
>pdb|1AWC|B Chain B, Mouse Gabp AlphaBETA DOMAIN BOUND TO DNA
Length = 153
Score = 77.4 bits (189), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 75/146 (51%), Gaps = 1/146 (0%)
Query: 821 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 880
A + + V +L+ +GA P LH+A + E+LL+ G S +A T+V
Sbjct: 9 AARAGQDDEVRILMANGAPFTTDWLGTSP-LHLAAQYGHFSTTEVLLRAGVSRDARTKVD 67
Query: 881 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASSH 940
LH+A + +VE+LLKHGA + A ++ LH A + N +VVELL+K+GA H
Sbjct: 68 RTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVH 127
Query: 941 VVSCYSNVKVHVSLNKIQDVSSSILR 966
S + +S++ + + IL+
Sbjct: 128 TQSKFCKTAFDISIDNGNEDLAEILQ 153
Score = 77.4 bits (189), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 1/145 (0%)
Query: 194 AAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVR 253
AA G + L+ A P G +PLH+A + E+LL+ G S +A T+V
Sbjct: 9 AARAGQDDEVRILMANGA-PFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVD 67
Query: 254 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 313
LH+A + +VE+LLKHGA + A ++ LH A + N +VVELL+K+GA +
Sbjct: 68 RTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVH 127
Query: 314 ATTEVREPMLHIACKKNRIKVVELL 338
++ + I+ + E+L
Sbjct: 128 TQSKFCKTAFDISIDNGNEDLAEIL 152
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 81/166 (48%), Gaps = 14/166 (8%)
Query: 1022 DLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAP 1081
DL L AA+ GQ++ +L+ NGA T T G +PLHL +YGH ++LL+
Sbjct: 1 DLGKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVS 59
Query: 1082 VDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHL 1141
D + K TPLH+A+ H N I LL++GA NA+ + T LH
Sbjct: 60 RDARTKVDRTPLHMAASEGHAN-------------IVEVLLKHGADVNAKDMLKMTALHW 106
Query: 1142 SASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELL 1187
+ H ++ +L+++GADV +K T + +AE+L
Sbjct: 107 ATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152
Score = 74.3 bits (181), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 73/145 (50%), Gaps = 1/145 (0%)
Query: 227 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 286
A + + V +L+ +GA P LH+A + E+LL+ G S +A T+V
Sbjct: 9 AARAGQDDEVRILMANGAPFTTDWLGTSP-LHLAAQYGHFSTTEVLLRAGVSRDARTKVD 67
Query: 287 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 346
LH+A + +VE+LLKHGA + A ++ LH A + N +VVELL+K+GA +
Sbjct: 68 RTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVH 127
Query: 347 ATTEVREPMLHIACKKNRIKVVELL 371
++ + I+ + E+L
Sbjct: 128 TQSKFCKTAFDISIDNGNEDLAEIL 152
Score = 74.3 bits (181), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 73/145 (50%), Gaps = 1/145 (0%)
Query: 260 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 319
A + + V +L+ +GA P LH+A + E+LL+ G S +A T+V
Sbjct: 9 AARAGQDDEVRILMANGAPFTTDWLGTSP-LHLAAQYGHFSTTEVLLRAGVSRDARTKVD 67
Query: 320 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 379
LH+A + +VE+LLKHGA + A ++ LH A + N +VVELL+K+GA +
Sbjct: 68 RTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVH 127
Query: 380 ATTEVREPMLHIACKKNRIKVVELL 404
++ + I+ + E+L
Sbjct: 128 TQSKFCKTAFDISIDNGNEDLAEIL 152
Score = 74.3 bits (181), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 73/145 (50%), Gaps = 1/145 (0%)
Query: 293 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 352
A + + V +L+ +GA P LH+A + E+LL+ G S +A T+V
Sbjct: 9 AARAGQDDEVRILMANGAPFTTDWLGTSP-LHLAAQYGHFSTTEVLLRAGVSRDARTKVD 67
Query: 353 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 412
LH+A + +VE+LLKHGA + A ++ LH A + N +VVELL+K+GA +
Sbjct: 68 RTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVH 127
Query: 413 ATTEVREPMLHIACKKNRIKVVELL 437
++ + I+ + E+L
Sbjct: 128 TQSKFCKTAFDISIDNGNEDLAEIL 152
Score = 74.3 bits (181), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 73/145 (50%), Gaps = 1/145 (0%)
Query: 326 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 385
A + + V +L+ +GA P LH+A + E+LL+ G S +A T+V
Sbjct: 9 AARAGQDDEVRILMANGAPFTTDWLGTSP-LHLAAQYGHFSTTEVLLRAGVSRDARTKVD 67
Query: 386 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 445
LH+A + +VE+LLKHGA + A ++ LH A + N +VVELL+K+GA +
Sbjct: 68 RTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVH 127
Query: 446 ATTEVREPMLHIACKKNRIKVVELL 470
++ + I+ + E+L
Sbjct: 128 TQSKFCKTAFDISIDNGNEDLAEIL 152
Score = 74.3 bits (181), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 73/145 (50%), Gaps = 1/145 (0%)
Query: 359 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 418
A + + V +L+ +GA P LH+A + E+LL+ G S +A T+V
Sbjct: 9 AARAGQDDEVRILMANGAPFTTDWLGTSP-LHLAAQYGHFSTTEVLLRAGVSRDARTKVD 67
Query: 419 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 478
LH+A + +VE+LLKHGA + A ++ LH A + N +VVELL+K+GA +
Sbjct: 68 RTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVH 127
Query: 479 ATTEVREPMLHIACKKNRIKVVELL 503
++ + I+ + E+L
Sbjct: 128 TQSKFCKTAFDISIDNGNEDLAEIL 152
Score = 74.3 bits (181), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 73/145 (50%), Gaps = 1/145 (0%)
Query: 392 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 451
A + + V +L+ +GA P LH+A + E+LL+ G S +A T+V
Sbjct: 9 AARAGQDDEVRILMANGAPFTTDWLGTSP-LHLAAQYGHFSTTEVLLRAGVSRDARTKVD 67
Query: 452 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 511
LH+A + +VE+LLKHGA + A ++ LH A + N +VVELL+K+GA +
Sbjct: 68 RTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVH 127
Query: 512 ATTEVREPMLHIACKKNRIKVVELL 536
++ + I+ + E+L
Sbjct: 128 TQSKFCKTAFDISIDNGNEDLAEIL 152
Score = 74.3 bits (181), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 73/145 (50%), Gaps = 1/145 (0%)
Query: 425 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 484
A + + V +L+ +GA P LH+A + E+LL+ G S +A T+V
Sbjct: 9 AARAGQDDEVRILMANGAPFTTDWLGTSP-LHLAAQYGHFSTTEVLLRAGVSRDARTKVD 67
Query: 485 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 544
LH+A + +VE+LLKHGA + A ++ LH A + N +VVELL+K+GA +
Sbjct: 68 RTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVH 127
Query: 545 ATTEVREPMLHIACKKNRIKVVELL 569
++ + I+ + E+L
Sbjct: 128 TQSKFCKTAFDISIDNGNEDLAEIL 152
Score = 74.3 bits (181), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 73/145 (50%), Gaps = 1/145 (0%)
Query: 458 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 517
A + + V +L+ +GA P LH+A + E+LL+ G S +A T+V
Sbjct: 9 AARAGQDDEVRILMANGAPFTTDWLGTSP-LHLAAQYGHFSTTEVLLRAGVSRDARTKVD 67
Query: 518 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 577
LH+A + +VE+LLKHGA + A ++ LH A + N +VVELL+K+GA +
Sbjct: 68 RTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVH 127
Query: 578 ATTEVREPMLHIACKKNRIKVVELL 602
++ + I+ + E+L
Sbjct: 128 TQSKFCKTAFDISIDNGNEDLAEIL 152
Score = 74.3 bits (181), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 73/145 (50%), Gaps = 1/145 (0%)
Query: 491 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 550
A + + V +L+ +GA P LH+A + E+LL+ G S +A T+V
Sbjct: 9 AARAGQDDEVRILMANGAPFTTDWLGTSP-LHLAAQYGHFSTTEVLLRAGVSRDARTKVD 67
Query: 551 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 610
LH+A + +VE+LLKHGA + A ++ LH A + N +VVELL+K+GA +
Sbjct: 68 RTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVH 127
Query: 611 ATTEVREPMLHIACKKNRIKVVELL 635
++ + I+ + E+L
Sbjct: 128 TQSKFCKTAFDISIDNGNEDLAEIL 152
Score = 74.3 bits (181), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 73/145 (50%), Gaps = 1/145 (0%)
Query: 524 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 583
A + + V +L+ +GA P LH+A + E+LL+ G S +A T+V
Sbjct: 9 AARAGQDDEVRILMANGAPFTTDWLGTSP-LHLAAQYGHFSTTEVLLRAGVSRDARTKVD 67
Query: 584 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 643
LH+A + +VE+LLKHGA + A ++ LH A + N +VVELL+K+GA +
Sbjct: 68 RTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVH 127
Query: 644 ATTEVREPMLHIACKKNRIKVVELL 668
++ + I+ + E+L
Sbjct: 128 TQSKFCKTAFDISIDNGNEDLAEIL 152
Score = 74.3 bits (181), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 73/145 (50%), Gaps = 1/145 (0%)
Query: 557 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 616
A + + V +L+ +GA P LH+A + E+LL+ G S +A T+V
Sbjct: 9 AARAGQDDEVRILMANGAPFTTDWLGTSP-LHLAAQYGHFSTTEVLLRAGVSRDARTKVD 67
Query: 617 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 676
LH+A + +VE+LLKHGA + A ++ LH A + N +VVELL+K+GA +
Sbjct: 68 RTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVH 127
Query: 677 ATTEVREPMLHIACKKNRIKVVELL 701
++ + I+ + E+L
Sbjct: 128 TQSKFCKTAFDISIDNGNEDLAEIL 152
Score = 74.3 bits (181), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 73/145 (50%), Gaps = 1/145 (0%)
Query: 590 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 649
A + + V +L+ +GA P LH+A + E+LL+ G S +A T+V
Sbjct: 9 AARAGQDDEVRILMANGAPFTTDWLGTSP-LHLAAQYGHFSTTEVLLRAGVSRDARTKVD 67
Query: 650 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 709
LH+A + +VE+LLKHGA + A ++ LH A + N +VVELL+K+GA +
Sbjct: 68 RTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVH 127
Query: 710 ATTEVREPMLHIACKKNRIKVVELL 734
++ + I+ + E+L
Sbjct: 128 TQSKFCKTAFDISIDNGNEDLAEIL 152
Score = 74.3 bits (181), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 73/145 (50%), Gaps = 1/145 (0%)
Query: 623 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 682
A + + V +L+ +GA P LH+A + E+LL+ G S +A T+V
Sbjct: 9 AARAGQDDEVRILMANGAPFTTDWLGTSP-LHLAAQYGHFSTTEVLLRAGVSRDARTKVD 67
Query: 683 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 742
LH+A + +VE+LLKHGA + A ++ LH A + N +VVELL+K+GA +
Sbjct: 68 RTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVH 127
Query: 743 ATTEVREPMLHIACKKNRIKVVELL 767
++ + I+ + E+L
Sbjct: 128 TQSKFCKTAFDISIDNGNEDLAEIL 152
Score = 74.3 bits (181), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 73/145 (50%), Gaps = 1/145 (0%)
Query: 656 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 715
A + + V +L+ +GA P LH+A + E+LL+ G S +A T+V
Sbjct: 9 AARAGQDDEVRILMANGAPFTTDWLGTSP-LHLAAQYGHFSTTEVLLRAGVSRDARTKVD 67
Query: 716 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 775
LH+A + +VE+LLKHGA + A ++ LH A + N +VVELL+K+GA +
Sbjct: 68 RTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVH 127
Query: 776 ATTEVREPMLHIACKKNRIKVVELL 800
++ + I+ + E+L
Sbjct: 128 TQSKFCKTAFDISIDNGNEDLAEIL 152
Score = 74.3 bits (181), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 73/145 (50%), Gaps = 1/145 (0%)
Query: 689 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 748
A + + V +L+ +GA P LH+A + E+LL+ G S +A T+V
Sbjct: 9 AARAGQDDEVRILMANGAPFTTDWLGTSP-LHLAAQYGHFSTTEVLLRAGVSRDARTKVD 67
Query: 749 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 808
LH+A + +VE+LLKHGA + A ++ LH A + N +VVELL+K+GA +
Sbjct: 68 RTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVH 127
Query: 809 ATTEVREPMLHIACKKNRIKVVELL 833
++ + I+ + E+L
Sbjct: 128 TQSKFCKTAFDISIDNGNEDLAEIL 152
Score = 74.3 bits (181), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 73/145 (50%), Gaps = 1/145 (0%)
Query: 722 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 781
A + + V +L+ +GA P LH+A + E+LL+ G S +A T+V
Sbjct: 9 AARAGQDDEVRILMANGAPFTTDWLGTSP-LHLAAQYGHFSTTEVLLRAGVSRDARTKVD 67
Query: 782 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 841
LH+A + +VE+LLKHGA + A ++ LH A + N +VVELL+K+GA +
Sbjct: 68 RTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVH 127
Query: 842 ATTEVREPMLHIACKKNRIKVVELL 866
++ + I+ + E+L
Sbjct: 128 TQSKFCKTAFDISIDNGNEDLAEIL 152
Score = 74.3 bits (181), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 73/145 (50%), Gaps = 1/145 (0%)
Query: 755 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 814
A + + V +L+ +GA P LH+A + E+LL+ G S +A T+V
Sbjct: 9 AARAGQDDEVRILMANGAPFTTDWLGTSP-LHLAAQYGHFSTTEVLLRAGVSRDARTKVD 67
Query: 815 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 874
LH+A + +VE+LLKHGA + A ++ LH A + N +VVELL+K+GA +
Sbjct: 68 RTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVH 127
Query: 875 ATTEVREPMLHIACKKNRIKVVELL 899
++ + I+ + E+L
Sbjct: 128 TQSKFCKTAFDISIDNGNEDLAEIL 152
Score = 74.3 bits (181), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 73/145 (50%), Gaps = 1/145 (0%)
Query: 788 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 847
A + + V +L+ +GA P LH+A + E+LL+ G S +A T+V
Sbjct: 9 AARAGQDDEVRILMANGAPFTTDWLGTSP-LHLAAQYGHFSTTEVLLRAGVSRDARTKVD 67
Query: 848 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 907
LH+A + +VE+LLKHGA + A ++ LH A + N +VVELL+K+GA +
Sbjct: 68 RTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVH 127
Query: 908 ATTEVREPMLHIACKKNRIKVVELL 932
++ + I+ + E+L
Sbjct: 128 TQSKFCKTAFDISIDNGNEDLAEIL 152
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 73/153 (47%), Gaps = 13/153 (8%)
Query: 155 KYGHIKVAKLLLQKDAPV--DFQGKAPVDDVTVDYLTALHVAAHCGHARVAKTLLDKKAD 212
+ G ++L+ AP D+ G +P LH+AA GH + LL
Sbjct: 11 RAGQDDEVRILMANGAPFTTDWLGTSP-----------LHLAAQYGHFSTTEVLLRAGVS 59
Query: 213 PNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 272
+AR TPLH+A + +VE+LLKHGA + A ++ LH A + N +VVELL
Sbjct: 60 RDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELL 119
Query: 273 LKHGASIEATTEVREPMLHIACKKNRIKVVELL 305
+K+GA + ++ + I+ + E+L
Sbjct: 120 IKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152
Score = 66.6 bits (161), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 80/159 (50%), Gaps = 16/159 (10%)
Query: 997 ASRLGNVDIVMLLLQHGAAVDSTTKDLYTA-LHIAAKEGQEEVAAVLLENGASLTSTTKK 1055
A+R G D V +L+ +GA TT L T+ LH+AA+ G VLL G S + TK
Sbjct: 9 AARAGQDDEVRILMANGAPF--TTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKV 66
Query: 1056 GFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASM 1115
TPLH+ GH + ++LL+ A V+ + +T LH A+ ++HQ V L
Sbjct: 67 DRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVEL-------- 118
Query: 1116 DIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAML 1154
L++YGA + +S T +S G+ D++ +L
Sbjct: 119 -----LIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 63/107 (58%), Gaps = 4/107 (3%)
Query: 25 PFGSHFQHNITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEM 84
PF + + +PLH+AA++G + +LL G + D +T+ T LH AA GH ++E+
Sbjct: 27 PFTTDWL-GTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEV 85
Query: 85 LLEQGAPISSKTKVRG---FYILRSGHEAVIEMLLEQGAPISSKTKV 128
LL+ GA +++K ++ + H+ V+E+L++ GA + +++K
Sbjct: 86 LLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKF 132
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 63/125 (50%), Gaps = 3/125 (2%)
Query: 1254 TTDQ-GFTPLHHSAQQGHSTIVALLLDRGASPNATNK-GFTPLHHSAQQGHSTIVALLLD 1311
TTD G +PLH +AQ GH + +LL G S +A K TPLH +A +GH+ IV +LL
Sbjct: 29 TTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLK 88
Query: 1312 RGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHST 1371
GA NA + + T LH A + + LL+ A+V + T S G+
Sbjct: 89 HGADVNAKDMLK-MTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNED 147
Query: 1372 IVALL 1376
+ +L
Sbjct: 148 LAEIL 152
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
Query: 1265 SAQQGHSTIVALLLDRGASPNATNKGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRG 1324
+A+ G V +L+ GA G +PLH +AQ GH + +LL G S +A K
Sbjct: 9 AARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDR 68
Query: 1325 FTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGASPN 1384
TPLH+A G ++ +LL A+V+ T LH + + H +V LL+ GA +
Sbjct: 69 -TPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVH 127
Query: 1385 ATNK 1388
+K
Sbjct: 128 TQSK 131
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 65/117 (55%)
Query: 992 TPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTS 1051
+PLH+A++ G+ +LL+ G + D+ TK T LH+AA EG + VLL++GA + +
Sbjct: 36 SPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNA 95
Query: 1052 TTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLL 1108
T LH ++ H +V +LL++ A V Q K T ++ ++++A +L
Sbjct: 96 KDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152
Score = 58.2 bits (139), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 54/84 (64%), Gaps = 3/84 (3%)
Query: 35 TPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISS 94
TPLH+AA G AN+V +LL GA+++ K +TALH A H+ V+E+L++ GA + +
Sbjct: 69 TPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHT 128
Query: 95 KTKV--RGFYI-LRSGHEAVIEML 115
++K F I + +G+E + E+L
Sbjct: 129 QSKFCKTAFDISIDNGNEDLAEIL 152
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 51/121 (42%)
Query: 1113 ASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPL 1172
A D +L P G +PLHL+A GH + +LL G K TPL
Sbjct: 12 AGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPL 71
Query: 1173 HLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKN 1232
H+ A E + E+LLK+ A V+ T LH A + + LL+ A+V
Sbjct: 72 HMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSK 131
Query: 1233 F 1233
F
Sbjct: 132 F 132
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 55/92 (59%)
Query: 984 NLRVREQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLL 1043
+ R + +TPLH+A+ G+ +IV +LL+HGA V++ TALH A + +EV +L+
Sbjct: 61 DARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLI 120
Query: 1044 ENGASLTSTTKKGFTPLHLTGKYGHIKVAKLL 1075
+ GA + + +K T ++ G+ +A++L
Sbjct: 121 KYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152
Score = 50.1 bits (118), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 74/154 (48%), Gaps = 27/154 (17%)
Query: 40 AAKWGKANMVTLLLSRGANIDNKTRD--GLTALHCAARSGHEAVIEMLLEQGAPISSKTK 97
AA+ G+ + V +L++ GA T D G + LH AA+ GH + E+LL G ++TK
Sbjct: 9 AARAGQDDEVRILMANGAPF---TTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTK 65
Query: 98 VRGFYI---LRSGHEAVIEMLLEQGAPISSKTKVAAVLLENGASLTSTTKKGFTPLHLTG 154
V + GH ++E+LL+ GA +++K + T LH
Sbjct: 66 VDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLK-----------------MTALHWAT 108
Query: 155 KYGHIKVAKLLLQKDAPVDFQGK--APVDDVTVD 186
++ H +V +LL++ A V Q K D+++D
Sbjct: 109 EHNHQEVVELLIKYGADVHTQSKFCKTAFDISID 142
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 78/204 (38%), Gaps = 64/204 (31%)
Query: 73 AARSGHEAVIEMLLEQGAPISSKTKVRGFYIL----RSGHEAVIEMLLEQGAPISSKTKV 128
AAR+G + + +L+ GAP + T G L + GH + E+LL G ++TKV
Sbjct: 9 AARAGQDDEVRILMANGAPFT--TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKV 66
Query: 129 AAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKAPVDDVTVDYL 188
TPLH+ GH + ++LL+ A V+
Sbjct: 67 DR-----------------TPLHMAASEGHANIVEVLLKHGADVN--------------- 94
Query: 189 TALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEA 248
AK +L T LH A + N +VVELL+K+GA +
Sbjct: 95 --------------AKDMLK------------MTALHWATEHNHQEVVELLIKYGADVHT 128
Query: 249 TTEVREPMLHIACKKNRIKVVELL 272
++ + I+ + E+L
Sbjct: 129 QSKFCKTAFDISIDNGNEDLAEIL 152
>pdb|3EU9|A Chain A, The Ankyrin Repeat Domain Of Huntingtin Interacting Protein
14
pdb|3EU9|B Chain B, The Ankyrin Repeat Domain Of Huntingtin Interacting Protein
14
pdb|3EU9|C Chain C, The Ankyrin Repeat Domain Of Huntingtin Interacting Protein
14
Length = 240
Score = 77.4 bits (189), Expect = 5e-14, Method: Composition-based stats.
Identities = 57/196 (29%), Positives = 89/196 (45%), Gaps = 14/196 (7%)
Query: 988 REQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDL-YTALHIAAKEGQEEVAAVLLENG 1046
+E T LH A+ +D+V + GA VD DL T LH A ++G + L++ G
Sbjct: 40 KENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYG 99
Query: 1047 ASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVAL 1106
A + +G + +HL ++GH + L+ K VD +NG+TPL A++ H
Sbjct: 100 ADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTH----- 154
Query: 1107 LLLEKGASMDIATTLLEYGAKPN-AESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAA 1165
S+D LL + N + T LH + G+ + ++LLE GA+V
Sbjct: 155 -------SVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQN 207
Query: 1166 KNGLTPLHLCAQEDRV 1181
G + L L Q V
Sbjct: 208 IKGESALDLAKQRKNV 223
Score = 72.0 bits (175), Expect = 2e-12, Method: Composition-based stats.
Identities = 48/137 (35%), Positives = 79/137 (57%), Gaps = 8/137 (5%)
Query: 1256 DQGFTPLHHSAQQGHSTIVALLLDRGASPNATN-KGFTPLHHSAQQGHSTIVALLLDRGA 1314
D TPLH + +QGH ++V L+ GA P+ + +G + +H +AQ GH++IVA L+ +G
Sbjct: 74 DLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQ 133
Query: 1315 SPNATNKTRGFTPLHIACHYGQ-ISMARLLLDQSANVSCTTDQGF---TPLHHSAQQGHS 1370
+ ++ G TPL A + + RLLL + NVS + T LH + G++
Sbjct: 134 DVDMMDQN-GMTPLMWAAYRTHSVDPTRLLL--TFNVSVNLGDKYHKNTALHWAVLAGNT 190
Query: 1371 TIVALLLDRGASPNATN 1387
T+++LLL+ GA+ +A N
Sbjct: 191 TVISLLLEAGANVDAQN 207
Score = 69.3 bits (168), Expect = 1e-11, Method: Composition-based stats.
Identities = 62/217 (28%), Positives = 95/217 (43%), Gaps = 27/217 (12%)
Query: 1154 LLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKK-GFTPLHIACHYG 1212
L+E G DV K +T LH A +R+ + + + A VD TPLH A G
Sbjct: 28 LVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQG 87
Query: 1213 QISMARLLLDQSANVTVPKNFPSRXXXXXXXXXXXXXXYTNTTDQGFTPLHHSAQQGHST 1272
+SM L+ A+ ++ +G + +H +AQ GH++
Sbjct: 88 HLSMVVQLMKYGADPSL------------------------IDGEGCSCIHLAAQFGHTS 123
Query: 1273 IVALLLDRGASPNATNK-GFTPLHHSAQQGHST-IVALLLDRGASPNATNKTRGFTPLHI 1330
IVA L+ +G + ++ G TPL +A + HS LLL S N +K T LH
Sbjct: 124 IVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHW 183
Query: 1331 ACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQ 1367
A G ++ LLL+ ANV +G + L + Q+
Sbjct: 184 AVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQR 220
Score = 68.2 bits (165), Expect = 3e-11, Method: Composition-based stats.
Identities = 62/238 (26%), Positives = 103/238 (43%), Gaps = 37/238 (15%)
Query: 1065 KYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEY 1124
+YG + + L++ V K VT LH A+ + ++ + KGA +D +
Sbjct: 18 QYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVD------QL 71
Query: 1125 GAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVA 1184
G N+ TPLH + +GH M L+++GAD S G + +HL AQ +
Sbjct: 72 GGDLNS------TPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIV 125
Query: 1185 ELLLKNNAQVDTPTKKGFTPLHIACHYGQ-ISMARLLLDQSANVTVPKNFPSRXXXXXXX 1243
L+ VD + G TPL A + + RLLL + +V + +
Sbjct: 126 AYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKN------- 178
Query: 1244 XXXXXXXYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATN-KGFTPLHHSAQQ 1300
T LH + G++T+++LLL+ GA+ +A N KG + L + Q+
Sbjct: 179 ----------------TALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQR 220
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 47/201 (23%), Positives = 91/201 (45%), Gaps = 9/201 (4%)
Query: 246 IEATTEVREP------MLHIACKKNRIKVVELLLKHGASIEATT-EVREPMLHIACKKNR 298
+EA +VR+P +LH A NRI +V+ + GA ++ ++ LH A ++
Sbjct: 29 VEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGH 88
Query: 299 IKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEV-REPMLH 357
+ +V L+K+GA +H+A + +V L+ G ++ + P++
Sbjct: 89 LSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMW 148
Query: 358 IACKKNRIKVVELLLKHGASIEATTEV-REPMLHIACKKNRIKVVELLLKHGASIEATTE 416
A + + + LLL S+ + + LH A V+ LLL+ GA+++A
Sbjct: 149 AAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNI 208
Query: 417 VREPMLHIACKKNRIKVVELL 437
E L +A ++ + ++ L
Sbjct: 209 KGESALDLAKQRKNVWMINHL 229
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 47/201 (23%), Positives = 91/201 (45%), Gaps = 9/201 (4%)
Query: 279 IEATTEVREP------MLHIACKKNRIKVVELLLKHGASIEATT-EVREPMLHIACKKNR 331
+EA +VR+P +LH A NRI +V+ + GA ++ ++ LH A ++
Sbjct: 29 VEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGH 88
Query: 332 IKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEV-REPMLH 390
+ +V L+K+GA +H+A + +V L+ G ++ + P++
Sbjct: 89 LSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMW 148
Query: 391 IACKKNRIKVVELLLKHGASIEATTEV-REPMLHIACKKNRIKVVELLLKHGASIEATTE 449
A + + + LLL S+ + + LH A V+ LLL+ GA+++A
Sbjct: 149 AAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNI 208
Query: 450 VREPMLHIACKKNRIKVVELL 470
E L +A ++ + ++ L
Sbjct: 209 KGESALDLAKQRKNVWMINHL 229
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 47/201 (23%), Positives = 91/201 (45%), Gaps = 9/201 (4%)
Query: 312 IEATTEVREP------MLHIACKKNRIKVVELLLKHGASIEAT-TEVREPMLHIACKKNR 364
+EA +VR+P +LH A NRI +V+ + GA ++ ++ LH A ++
Sbjct: 29 VEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGH 88
Query: 365 IKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEV-REPMLH 423
+ +V L+K+GA +H+A + +V L+ G ++ + P++
Sbjct: 89 LSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMW 148
Query: 424 IACKKNRIKVVELLLKHGASIEATTEV-REPMLHIACKKNRIKVVELLLKHGASIEATTE 482
A + + + LLL S+ + + LH A V+ LLL+ GA+++A
Sbjct: 149 AAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNI 208
Query: 483 VREPMLHIACKKNRIKVVELL 503
E L +A ++ + ++ L
Sbjct: 209 KGESALDLAKQRKNVWMINHL 229
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 47/201 (23%), Positives = 91/201 (45%), Gaps = 9/201 (4%)
Query: 345 IEATTEVREP------MLHIACKKNRIKVVELLLKHGASIEAT-TEVREPMLHIACKKNR 397
+EA +VR+P +LH A NRI +V+ + GA ++ ++ LH A ++
Sbjct: 29 VEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGH 88
Query: 398 IKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEV-REPMLH 456
+ +V L+K+GA +H+A + +V L+ G ++ + P++
Sbjct: 89 LSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMW 148
Query: 457 IACKKNRIKVVELLLKHGASIEATTEV-REPMLHIACKKNRIKVVELLLKHGASIEATTE 515
A + + + LLL S+ + + LH A V+ LLL+ GA+++A
Sbjct: 149 AAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNI 208
Query: 516 VREPMLHIACKKNRIKVVELL 536
E L +A ++ + ++ L
Sbjct: 209 KGESALDLAKQRKNVWMINHL 229
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 47/201 (23%), Positives = 91/201 (45%), Gaps = 9/201 (4%)
Query: 378 IEATTEVREP------MLHIACKKNRIKVVELLLKHGASIEATT-EVREPMLHIACKKNR 430
+EA +VR+P +LH A NRI +V+ + GA ++ ++ LH A ++
Sbjct: 29 VEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGH 88
Query: 431 IKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEV-REPMLH 489
+ +V L+K+GA +H+A + +V L+ G ++ + P++
Sbjct: 89 LSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMW 148
Query: 490 IACKKNRIKVVELLLKHGASIEATTEV-REPMLHIACKKNRIKVVELLLKHGASIEATTE 548
A + + + LLL S+ + + LH A V+ LLL+ GA+++A
Sbjct: 149 AAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNI 208
Query: 549 VREPMLHIACKKNRIKVVELL 569
E L +A ++ + ++ L
Sbjct: 209 KGESALDLAKQRKNVWMINHL 229
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 47/201 (23%), Positives = 91/201 (45%), Gaps = 9/201 (4%)
Query: 411 IEATTEVREP------MLHIACKKNRIKVVELLLKHGASIEATT-EVREPMLHIACKKNR 463
+EA +VR+P +LH A NRI +V+ + GA ++ ++ LH A ++
Sbjct: 29 VEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGH 88
Query: 464 IKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEV-REPMLH 522
+ +V L+K+GA +H+A + +V L+ G ++ + P++
Sbjct: 89 LSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMW 148
Query: 523 IACKKNRIKVVELLLKHGASIEATTEV-REPMLHIACKKNRIKVVELLLKHGASIEATTE 581
A + + + LLL S+ + + LH A V+ LLL+ GA+++A
Sbjct: 149 AAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNI 208
Query: 582 VREPMLHIACKKNRIKVVELL 602
E L +A ++ + ++ L
Sbjct: 209 KGESALDLAKQRKNVWMINHL 229
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 47/201 (23%), Positives = 91/201 (45%), Gaps = 9/201 (4%)
Query: 444 IEATTEVREP------MLHIACKKNRIKVVELLLKHGASIEATT-EVREPMLHIACKKNR 496
+EA +VR+P +LH A NRI +V+ + GA ++ ++ LH A ++
Sbjct: 29 VEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGH 88
Query: 497 IKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEV-REPMLH 555
+ +V L+K+GA +H+A + +V L+ G ++ + P++
Sbjct: 89 LSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMW 148
Query: 556 IACKKNRIKVVELLLKHGASIEATTEV-REPMLHIACKKNRIKVVELLLKHGASIEATTE 614
A + + + LLL S+ + + LH A V+ LLL+ GA+++A
Sbjct: 149 AAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNI 208
Query: 615 VREPMLHIACKKNRIKVVELL 635
E L +A ++ + ++ L
Sbjct: 209 KGESALDLAKQRKNVWMINHL 229
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 47/201 (23%), Positives = 91/201 (45%), Gaps = 9/201 (4%)
Query: 477 IEATTEVREP------MLHIACKKNRIKVVELLLKHGASIEATT-EVREPMLHIACKKNR 529
+EA +VR+P +LH A NRI +V+ + GA ++ ++ LH A ++
Sbjct: 29 VEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGH 88
Query: 530 IKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEV-REPMLH 588
+ +V L+K+GA +H+A + +V L+ G ++ + P++
Sbjct: 89 LSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMW 148
Query: 589 IACKKNRIKVVELLLKHGASIEATTEV-REPMLHIACKKNRIKVVELLLKHGASIEATTE 647
A + + + LLL S+ + + LH A V+ LLL+ GA+++A
Sbjct: 149 AAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNI 208
Query: 648 VREPMLHIACKKNRIKVVELL 668
E L +A ++ + ++ L
Sbjct: 209 KGESALDLAKQRKNVWMINHL 229
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 47/201 (23%), Positives = 91/201 (45%), Gaps = 9/201 (4%)
Query: 510 IEATTEVREP------MLHIACKKNRIKVVELLLKHGASIEATT-EVREPMLHIACKKNR 562
+EA +VR+P +LH A NRI +V+ + GA ++ ++ LH A ++
Sbjct: 29 VEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGH 88
Query: 563 IKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEV-REPMLH 621
+ +V L+K+GA +H+A + +V L+ G ++ + P++
Sbjct: 89 LSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMW 148
Query: 622 IACKKNRIKVVELLLKHGASIEATTEV-REPMLHIACKKNRIKVVELLLKHGASIEATTE 680
A + + + LLL S+ + + LH A V+ LLL+ GA+++A
Sbjct: 149 AAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNI 208
Query: 681 VREPMLHIACKKNRIKVVELL 701
E L +A ++ + ++ L
Sbjct: 209 KGESALDLAKQRKNVWMINHL 229
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 47/201 (23%), Positives = 91/201 (45%), Gaps = 9/201 (4%)
Query: 543 IEATTEVREP------MLHIACKKNRIKVVELLLKHGASIEATT-EVREPMLHIACKKNR 595
+EA +VR+P +LH A NRI +V+ + GA ++ ++ LH A ++
Sbjct: 29 VEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGH 88
Query: 596 IKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEV-REPMLH 654
+ +V L+K+GA +H+A + +V L+ G ++ + P++
Sbjct: 89 LSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMW 148
Query: 655 IACKKNRIKVVELLLKHGASIEATTEV-REPMLHIACKKNRIKVVELLLKHGASIEATTE 713
A + + + LLL S+ + + LH A V+ LLL+ GA+++A
Sbjct: 149 AAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNI 208
Query: 714 VREPMLHIACKKNRIKVVELL 734
E L +A ++ + ++ L
Sbjct: 209 KGESALDLAKQRKNVWMINHL 229
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 47/201 (23%), Positives = 91/201 (45%), Gaps = 9/201 (4%)
Query: 576 IEATTEVREP------MLHIACKKNRIKVVELLLKHGASIEAT-TEVREPMLHIACKKNR 628
+EA +VR+P +LH A NRI +V+ + GA ++ ++ LH A ++
Sbjct: 29 VEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGH 88
Query: 629 IKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEV-REPMLH 687
+ +V L+K+GA +H+A + +V L+ G ++ + P++
Sbjct: 89 LSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMW 148
Query: 688 IACKKNRIKVVELLLKHGASIEATTEV-REPMLHIACKKNRIKVVELLLKHGASIEATTE 746
A + + + LLL S+ + + LH A V+ LLL+ GA+++A
Sbjct: 149 AAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNI 208
Query: 747 VREPMLHIACKKNRIKVVELL 767
E L +A ++ + ++ L
Sbjct: 209 KGESALDLAKQRKNVWMINHL 229
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 47/201 (23%), Positives = 91/201 (45%), Gaps = 9/201 (4%)
Query: 609 IEATTEVREP------MLHIACKKNRIKVVELLLKHGASIEAT-TEVREPMLHIACKKNR 661
+EA +VR+P +LH A NRI +V+ + GA ++ ++ LH A ++
Sbjct: 29 VEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGH 88
Query: 662 IKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEV-REPMLH 720
+ +V L+K+GA +H+A + +V L+ G ++ + P++
Sbjct: 89 LSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMW 148
Query: 721 IACKKNRIKVVELLLKHGASIEATTEV-REPMLHIACKKNRIKVVELLLKHGASIEATTE 779
A + + + LLL S+ + + LH A V+ LLL+ GA+++A
Sbjct: 149 AAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNI 208
Query: 780 VREPMLHIACKKNRIKVVELL 800
E L +A ++ + ++ L
Sbjct: 209 KGESALDLAKQRKNVWMINHL 229
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 47/201 (23%), Positives = 91/201 (45%), Gaps = 9/201 (4%)
Query: 642 IEATTEVREP------MLHIACKKNRIKVVELLLKHGASIEAT-TEVREPMLHIACKKNR 694
+EA +VR+P +LH A NRI +V+ + GA ++ ++ LH A ++
Sbjct: 29 VEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGH 88
Query: 695 IKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEV-REPMLH 753
+ +V L+K+GA +H+A + +V L+ G ++ + P++
Sbjct: 89 LSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMW 148
Query: 754 IACKKNRIKVVELLLKHGASIEATTEV-REPMLHIACKKNRIKVVELLLKHGASIEATTE 812
A + + + LLL S+ + + LH A V+ LLL+ GA+++A
Sbjct: 149 AAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNI 208
Query: 813 VREPMLHIACKKNRIKVVELL 833
E L +A ++ + ++ L
Sbjct: 209 KGESALDLAKQRKNVWMINHL 229
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 47/201 (23%), Positives = 91/201 (45%), Gaps = 9/201 (4%)
Query: 675 IEATTEVREP------MLHIACKKNRIKVVELLLKHGASIEATT-EVREPMLHIACKKNR 727
+EA +VR+P +LH A NRI +V+ + GA ++ ++ LH A ++
Sbjct: 29 VEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGH 88
Query: 728 IKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEV-REPMLH 786
+ +V L+K+GA +H+A + +V L+ G ++ + P++
Sbjct: 89 LSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMW 148
Query: 787 IACKKNRIKVVELLLKHGASIEATTEV-REPMLHIACKKNRIKVVELLLKHGASIEATTE 845
A + + + LLL S+ + + LH A V+ LLL+ GA+++A
Sbjct: 149 AAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNI 208
Query: 846 VREPMLHIACKKNRIKVVELL 866
E L +A ++ + ++ L
Sbjct: 209 KGESALDLAKQRKNVWMINHL 229
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 47/201 (23%), Positives = 91/201 (45%), Gaps = 9/201 (4%)
Query: 708 IEATTEVREP------MLHIACKKNRIKVVELLLKHGASIEAT-TEVREPMLHIACKKNR 760
+EA +VR+P +LH A NRI +V+ + GA ++ ++ LH A ++
Sbjct: 29 VEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGH 88
Query: 761 IKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEV-REPMLH 819
+ +V L+K+GA +H+A + +V L+ G ++ + P++
Sbjct: 89 LSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMW 148
Query: 820 IACKKNRIKVVELLLKHGASIEATTEV-REPMLHIACKKNRIKVVELLLKHGASIEATTE 878
A + + + LLL S+ + + LH A V+ LLL+ GA+++A
Sbjct: 149 AAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNI 208
Query: 879 VREPMLHIACKKNRIKVVELL 899
E L +A ++ + ++ L
Sbjct: 209 KGESALDLAKQRKNVWMINHL 229
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 47/201 (23%), Positives = 91/201 (45%), Gaps = 9/201 (4%)
Query: 741 IEATTEVREP------MLHIACKKNRIKVVELLLKHGASIEATT-EVREPMLHIACKKNR 793
+EA +VR+P +LH A NRI +V+ + GA ++ ++ LH A ++
Sbjct: 29 VEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGH 88
Query: 794 IKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEV-REPMLH 852
+ +V L+K+GA +H+A + +V L+ G ++ + P++
Sbjct: 89 LSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMW 148
Query: 853 IACKKNRIKVVELLLKHGASIEATTEV-REPMLHIACKKNRIKVVELLLKHGASIEATTE 911
A + + + LLL S+ + + LH A V+ LLL+ GA+++A
Sbjct: 149 AAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNI 208
Query: 912 VREPMLHIACKKNRIKVVELL 932
E L +A ++ + ++ L
Sbjct: 209 KGESALDLAKQRKNVWMINHL 229
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 54/211 (25%), Positives = 94/211 (44%), Gaps = 23/211 (10%)
Query: 31 QHNITPLHVAAKWGKANMVTLLLSRGANIDNKTRD-GLTALHCAARSGHEAVIEMLLEQG 89
+ N+T LH AA + ++V +S+GA +D D T LH A R GH +++ L++ G
Sbjct: 40 KENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYG 99
Query: 90 APISSKTKVRGFYILRSGHEAVIEMLLEQGAPISSKTKVAAVLLENGASLTSTTKKGFTP 149
A S ++ + I + + G T + A L+ G + + G TP
Sbjct: 100 ADPS---------LIDGEGCSCIHLAAQFG-----HTSIVAYLIAKGQDVDMMDQNGMTP 145
Query: 150 LHLTGKYGH-IKVAKLLLQKDAPVDFQGKAPVDDVTVDYLTALHVAAHCGHARVAKTLLD 208
L H + +LLL + V+ K + TALH A G+ V LL+
Sbjct: 146 LMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKN-------TALHWAVLAGNTTVISLLLE 198
Query: 209 KKADPNARALNGFTPLHIACKKNRIKVVELL 239
A+ +A+ + G + L +A ++ + ++ L
Sbjct: 199 AGANVDAQNIKGESALDLAKQRKNVWMINHL 229
Score = 53.5 bits (127), Expect = 9e-07, Method: Composition-based stats.
Identities = 51/209 (24%), Positives = 88/209 (42%), Gaps = 9/209 (4%)
Query: 132 LLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKAPVDDVTVDYLTAL 191
L+E G + K+ T LH I + K + K A VD G D+ T L
Sbjct: 28 LVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLG----GDLNS---TPL 80
Query: 192 HVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTE 251
H A GH + L+ ADP+ G + +H+A + +V L+ G ++ +
Sbjct: 81 HWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQ 140
Query: 252 V-REPMLHIACKKNRIKVVELLLKHGASIEATTEV-REPMLHIACKKNRIKVVELLLKHG 309
P++ A + + + LLL S+ + + LH A V+ LLL+ G
Sbjct: 141 NGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAG 200
Query: 310 ASIEATTEVREPMLHIACKKNRIKVVELL 338
A+++A E L +A ++ + ++ L
Sbjct: 201 ANVDAQNIKGESALDLAKQRKNVWMINHL 229
Score = 52.4 bits (124), Expect = 2e-06, Method: Composition-based stats.
Identities = 55/201 (27%), Positives = 91/201 (45%), Gaps = 24/201 (11%)
Query: 873 IEATTEVREP------MLHIACKKNRIKVVELLLKHGASIEAT-TEVREPMLHIACKKNR 925
+EA +VR+P +LH A NRI +V+ + GA ++ ++ LH A ++
Sbjct: 29 VEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGH 88
Query: 926 IKVVELLLKHGASSHVVSCYSNVKVHVS--LNKIQDVSSSILRLATCDVLPQCETRLNFS 983
+ +V L+K+GA ++ +H++ V+ I + D++ Q
Sbjct: 89 LSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQ-------- 140
Query: 984 NLRVREQQTPLHIAS-RLGNVDIVMLLLQHGAAVDSTTK-DLYTALHIAAKEGQEEVAAV 1041
TPL A+ R +VD LLL +V+ K TALH A G V ++
Sbjct: 141 -----NGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISL 195
Query: 1042 LLENGASLTSTTKKGFTPLHL 1062
LLE GA++ + KG + L L
Sbjct: 196 LLEAGANVDAQNIKGESALDL 216
Score = 50.1 bits (118), Expect = 9e-06, Method: Composition-based stats.
Identities = 43/186 (23%), Positives = 83/186 (44%), Gaps = 3/186 (1%)
Query: 222 TPLHIACKKNRIKVVELLLKHGASIEATT-EVREPMLHIACKKNRIKVVELLLKHGASIE 280
T LH A NRI +V+ + GA ++ ++ LH A ++ + +V L+K+GA
Sbjct: 44 TLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPS 103
Query: 281 ATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEV-REPMLHIACKKNRIKVVELLL 339
+H+A + +V L+ G ++ + P++ A + + + LLL
Sbjct: 104 LIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLL 163
Query: 340 KHGASIEATTEV-REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRI 398
S+ + + LH A V+ LLL+ GA+++A E L +A ++ +
Sbjct: 164 TFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNV 223
Query: 399 KVVELL 404
++ L
Sbjct: 224 WMINHL 229
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 42/174 (24%), Positives = 78/174 (44%), Gaps = 9/174 (5%)
Query: 774 IEATTEVREP------MLHIACKKNRIKVVELLLKHGASIEAT-TEVREPMLHIACKKNR 826
+EA +VR+P +LH A NRI +V+ + GA ++ ++ LH A ++
Sbjct: 29 VEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGH 88
Query: 827 IKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEV-REPMLH 885
+ +V L+K+GA +H+A + +V L+ G ++ + P++
Sbjct: 89 LSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMW 148
Query: 886 IACKKNRIKVVELLLKHGASIEATTEV-REPMLHIACKKNRIKVVELLLKHGAS 938
A + + + LLL S+ + + LH A V+ LLL+ GA+
Sbjct: 149 AAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGAN 202
Score = 48.5 bits (114), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 45/89 (50%)
Query: 1292 TPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVS 1351
T LH +A +V + +GA + TPLH A G +SM L+ A+ S
Sbjct: 44 TLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPS 103
Query: 1352 CTTDQGFTPLHHSAQQGHSTIVALLLDRG 1380
+G + +H +AQ GH++IVA L+ +G
Sbjct: 104 LIDGEGCSCIHLAAQFGHTSIVAYLIAKG 132
Score = 47.8 bits (112), Expect = 5e-05, Method: Composition-based stats.
Identities = 50/202 (24%), Positives = 87/202 (43%), Gaps = 20/202 (9%)
Query: 840 IEATTEVREP------MLHIACKKNRIKVVELLLKHGASIEAT-TEVREPMLHIACKKNR 892
+EA +VR+P +LH A NRI +V+ + GA ++ ++ LH A ++
Sbjct: 29 VEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGH 88
Query: 893 IKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASSHVVSCYSNVKVHV 952
+ +V L+K+GA +H+A + +V L+ G ++ +
Sbjct: 89 LSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMW 148
Query: 953 SLNKIQDVSSSILRLATCDVLPQCETRLNFS-NLRVR-EQQTPLHIASRLGNVDIVMLLL 1010
+ + V + L L N S NL + + T LH A GN ++ LLL
Sbjct: 149 AAYRTHSVDPTRLLLT-----------FNVSVNLGDKYHKNTALHWAVLAGNTTVISLLL 197
Query: 1011 QHGAAVDSTTKDLYTALHIAAK 1032
+ GA VD+ +AL +A +
Sbjct: 198 EAGANVDAQNIKGESALDLAKQ 219
Score = 47.0 bits (110), Expect = 8e-05, Method: Composition-based stats.
Identities = 46/188 (24%), Positives = 82/188 (43%), Gaps = 5/188 (2%)
Query: 188 LTALHVAAHCGHARVAKTLLDKKA--DPNARALNGFTPLHIACKKNRIKVVELLLKHGAS 245
+T LH AA + K + K A D LN TPLH A ++ + +V L+K+GA
Sbjct: 43 VTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNS-TPLHWATRQGHLSMVVQLMKYGAD 101
Query: 246 IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEV-REPMLHIACKKNRIKVVEL 304
+H+A + +V L+ G ++ + P++ A + + + L
Sbjct: 102 PSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRL 161
Query: 305 LLKHGASIEATTEV-REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKN 363
LL S+ + + LH A V+ LLL+ GA+++A E L +A ++
Sbjct: 162 LLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRK 221
Query: 364 RIKVVELL 371
+ ++ L
Sbjct: 222 NVWMINHL 229
Score = 34.3 bits (77), Expect = 0.56, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 32 HNITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLE 87
H T LH A G +++LLL GAN+D + G +AL A + + +I L E
Sbjct: 176 HKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQE 231
>pdb|3TWR|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex
With Peptide From Human 3bp2
pdb|3TWR|B Chain B, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex
With Peptide From Human 3bp2
pdb|3TWR|C Chain C, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex
With Peptide From Human 3bp2
pdb|3TWR|D Chain D, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex
With Peptide From Human 3bp2
pdb|3TWS|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex
With Peptide From Human Terf1 (Chimeric Peptide)
pdb|3TWS|B Chain B, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex
With Peptide From Human Terf1 (Chimeric Peptide)
pdb|3TWS|C Chain C, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex
With Peptide From Human Terf1 (Chimeric Peptide)
pdb|3TWS|D Chain D, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex
With Peptide From Human Terf1 (Chimeric Peptide)
pdb|3TWT|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex
With Peptide From Human Mcl1 (Chimeric Peptide)
pdb|3TWT|B Chain B, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex
With Peptide From Human Mcl1 (Chimeric Peptide)
pdb|3TWT|C Chain C, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex
With Peptide From Human Mcl1 (Chimeric Peptide)
pdb|3TWT|D Chain D, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex
With Peptide From Human Mcl1 (Chimeric Peptide)
pdb|3TWV|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex
With Peptide From Human Numa1 (Chimeric Peptide)
pdb|3TWV|B Chain B, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex
With Peptide From Human Numa1 (Chimeric Peptide)
pdb|3TWV|C Chain C, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex
With Peptide From Human Numa1 (Chimeric Peptide)
pdb|3TWV|D Chain D, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex
With Peptide From Human Numa1 (Chimeric Peptide)
pdb|3TWW|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex
With Peptide From Human Lnpep (Chimeric Peptide)
pdb|3TWW|B Chain B, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex
With Peptide From Human Lnpep (Chimeric Peptide)
pdb|3TWX|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex
With Peptide From Human Fnbp1 (Chimeric Peptide)
pdb|3TWX|B Chain B, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex
With Peptide From Human Fnbp1 (Chimeric Peptide)
Length = 165
Score = 77.4 bits (189), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 65/122 (53%), Gaps = 13/122 (10%)
Query: 1058 TPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDI 1117
TPLH Y + V + LLQ A V + K G+ PLH A Y H VA LL++ GA +++
Sbjct: 44 TPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNV 103
Query: 1118 ATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQ 1177
A + FTPLH +A++G ++ +LL+HGAD + ++G TPL L
Sbjct: 104 A-------------DLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD 150
Query: 1178 ED 1179
D
Sbjct: 151 GD 152
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 71/134 (52%), Gaps = 4/134 (2%)
Query: 214 NARALNG--FTPLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVEL 271
N R + G TPLH A NR+ VVE LL+HGA + A + LH AC +V EL
Sbjct: 34 NCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAEL 93
Query: 272 LLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNR 331
L+KHGA + + LH A K + ++ +LLL+HGA + T + R+ + K+
Sbjct: 94 LVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGA--DPTKKNRDGNTPLDLVKDG 151
Query: 332 IKVVELLLKHGASI 345
++ LL+ A++
Sbjct: 152 DTDIQDLLRGDAAL 165
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 62/141 (43%), Gaps = 26/141 (18%)
Query: 1170 TPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTV 1229
TPLH A +RV V E LL++ A V K G PLH AC YG +A LL+ A V V
Sbjct: 44 TPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNV 103
Query: 1230 PKNFPSRXXXXXXXXXXXXXXYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATNK 1289
+ FTPLH +A +G I LLL GA P N+
Sbjct: 104 ADLWK------------------------FTPLHEAAAKGKYEICKLLLQHGADPTKKNR 139
Query: 1290 -GFTPLHHSAQQGHSTIVALL 1309
G TPL + G + I LL
Sbjct: 140 DGNTPL-DLVKDGDTDIQDLL 159
Score = 70.1 bits (170), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 51/97 (52%), Gaps = 1/97 (1%)
Query: 1292 TPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVS 1351
TPLH +A ++V LL GA +A +K G PLH AC YG +A LL+ A V+
Sbjct: 44 TPLHFAAGYNRVSVVEYLLQHGADVHAKDKG-GLVPLHNACSYGHYEVAELLVKHGAVVN 102
Query: 1352 CTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATNK 1388
FTPLH +A +G I LLL GA P N+
Sbjct: 103 VADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNR 139
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 57/111 (51%)
Query: 990 QQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASL 1049
Q TPLH A+ V +V LLQHGA V + K LH A G EVA +L+++GA +
Sbjct: 42 QSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVV 101
Query: 1050 TSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYD 1100
FTPLH G ++ KLLLQ A + ++G TPL + D
Sbjct: 102 NVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKDGD 152
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 290 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 349
LH A NR+ VVE LL+HGA + A + LH AC +V ELL+KHGA +
Sbjct: 46 LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD 105
Query: 350 EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 409
+ LH A K + ++ +LLL+HGA + T + R+ + K+ ++ LL+ A
Sbjct: 106 LWKFTPLHEAAAKGKYEICKLLLQHGA--DPTKKNRDGNTPLDLVKDGDTDIQDLLRGDA 163
Query: 410 SI 411
++
Sbjct: 164 AL 165
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 323 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 382
LH A NR+ VVE LL+HGA + A + LH AC +V ELL+KHGA +
Sbjct: 46 LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD 105
Query: 383 EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 442
+ LH A K + ++ +LLL+HGA + T + R+ + K+ ++ LL+ A
Sbjct: 106 LWKFTPLHEAAAKGKYEICKLLLQHGA--DPTKKNRDGNTPLDLVKDGDTDIQDLLRGDA 163
Query: 443 SI 444
++
Sbjct: 164 AL 165
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 356 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 415
LH A NR+ VVE LL+HGA + A + LH AC +V ELL+KHGA +
Sbjct: 46 LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD 105
Query: 416 EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 475
+ LH A K + ++ +LLL+HGA + T + R+ + K+ ++ LL+ A
Sbjct: 106 LWKFTPLHEAAAKGKYEICKLLLQHGA--DPTKKNRDGNTPLDLVKDGDTDIQDLLRGDA 163
Query: 476 SI 477
++
Sbjct: 164 AL 165
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 389 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 448
LH A NR+ VVE LL+HGA + A + LH AC +V ELL+KHGA +
Sbjct: 46 LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD 105
Query: 449 EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 508
+ LH A K + ++ +LLL+HGA + T + R+ + K+ ++ LL+ A
Sbjct: 106 LWKFTPLHEAAAKGKYEICKLLLQHGA--DPTKKNRDGNTPLDLVKDGDTDIQDLLRGDA 163
Query: 509 SI 510
++
Sbjct: 164 AL 165
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 422 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 481
LH A NR+ VVE LL+HGA + A + LH AC +V ELL+KHGA +
Sbjct: 46 LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD 105
Query: 482 EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 541
+ LH A K + ++ +LLL+HGA + T + R+ + K+ ++ LL+ A
Sbjct: 106 LWKFTPLHEAAAKGKYEICKLLLQHGA--DPTKKNRDGNTPLDLVKDGDTDIQDLLRGDA 163
Query: 542 SI 543
++
Sbjct: 164 AL 165
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 455 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 514
LH A NR+ VVE LL+HGA + A + LH AC +V ELL+KHGA +
Sbjct: 46 LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD 105
Query: 515 EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 574
+ LH A K + ++ +LLL+HGA + T + R+ + K+ ++ LL+ A
Sbjct: 106 LWKFTPLHEAAAKGKYEICKLLLQHGA--DPTKKNRDGNTPLDLVKDGDTDIQDLLRGDA 163
Query: 575 SI 576
++
Sbjct: 164 AL 165
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 488 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 547
LH A NR+ VVE LL+HGA + A + LH AC +V ELL+KHGA +
Sbjct: 46 LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD 105
Query: 548 EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 607
+ LH A K + ++ +LLL+HGA + T + R+ + K+ ++ LL+ A
Sbjct: 106 LWKFTPLHEAAAKGKYEICKLLLQHGA--DPTKKNRDGNTPLDLVKDGDTDIQDLLRGDA 163
Query: 608 SI 609
++
Sbjct: 164 AL 165
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 521 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 580
LH A NR+ VVE LL+HGA + A + LH AC +V ELL+KHGA +
Sbjct: 46 LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD 105
Query: 581 EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 640
+ LH A K + ++ +LLL+HGA + T + R+ + K+ ++ LL+ A
Sbjct: 106 LWKFTPLHEAAAKGKYEICKLLLQHGA--DPTKKNRDGNTPLDLVKDGDTDIQDLLRGDA 163
Query: 641 SI 642
++
Sbjct: 164 AL 165
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 554 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 613
LH A NR+ VVE LL+HGA + A + LH AC +V ELL+KHGA +
Sbjct: 46 LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD 105
Query: 614 EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 673
+ LH A K + ++ +LLL+HGA + T + R+ + K+ ++ LL+ A
Sbjct: 106 LWKFTPLHEAAAKGKYEICKLLLQHGA--DPTKKNRDGNTPLDLVKDGDTDIQDLLRGDA 163
Query: 674 SI 675
++
Sbjct: 164 AL 165
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 587 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 646
LH A NR+ VVE LL+HGA + A + LH AC +V ELL+KHGA +
Sbjct: 46 LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD 105
Query: 647 EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 706
+ LH A K + ++ +LLL+HGA + T + R+ + K+ ++ LL+ A
Sbjct: 106 LWKFTPLHEAAAKGKYEICKLLLQHGA--DPTKKNRDGNTPLDLVKDGDTDIQDLLRGDA 163
Query: 707 SI 708
++
Sbjct: 164 AL 165
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 620 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 679
LH A NR+ VVE LL+HGA + A + LH AC +V ELL+KHGA +
Sbjct: 46 LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD 105
Query: 680 EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 739
+ LH A K + ++ +LLL+HGA + T + R+ + K+ ++ LL+ A
Sbjct: 106 LWKFTPLHEAAAKGKYEICKLLLQHGA--DPTKKNRDGNTPLDLVKDGDTDIQDLLRGDA 163
Query: 740 SI 741
++
Sbjct: 164 AL 165
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 653 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 712
LH A NR+ VVE LL+HGA + A + LH AC +V ELL+KHGA +
Sbjct: 46 LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD 105
Query: 713 EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 772
+ LH A K + ++ +LLL+HGA + T + R+ + K+ ++ LL+ A
Sbjct: 106 LWKFTPLHEAAAKGKYEICKLLLQHGA--DPTKKNRDGNTPLDLVKDGDTDIQDLLRGDA 163
Query: 773 SI 774
++
Sbjct: 164 AL 165
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 686 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 745
LH A NR+ VVE LL+HGA + A + LH AC +V ELL+KHGA +
Sbjct: 46 LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD 105
Query: 746 EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 805
+ LH A K + ++ +LLL+HGA + T + R+ + K+ ++ LL+ A
Sbjct: 106 LWKFTPLHEAAAKGKYEICKLLLQHGA--DPTKKNRDGNTPLDLVKDGDTDIQDLLRGDA 163
Query: 806 SI 807
++
Sbjct: 164 AL 165
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 719 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 778
LH A NR+ VVE LL+HGA + A + LH AC +V ELL+KHGA +
Sbjct: 46 LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD 105
Query: 779 EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 838
+ LH A K + ++ +LLL+HGA + T + R+ + K+ ++ LL+ A
Sbjct: 106 LWKFTPLHEAAAKGKYEICKLLLQHGA--DPTKKNRDGNTPLDLVKDGDTDIQDLLRGDA 163
Query: 839 SI 840
++
Sbjct: 164 AL 165
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 752 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 811
LH A NR+ VVE LL+HGA + A + LH AC +V ELL+KHGA +
Sbjct: 46 LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD 105
Query: 812 EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 871
+ LH A K + ++ +LLL+HGA + T + R+ + K+ ++ LL+ A
Sbjct: 106 LWKFTPLHEAAAKGKYEICKLLLQHGA--DPTKKNRDGNTPLDLVKDGDTDIQDLLRGDA 163
Query: 872 SI 873
++
Sbjct: 164 AL 165
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 785 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 844
LH A NR+ VVE LL+HGA + A + LH AC +V ELL+KHGA +
Sbjct: 46 LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD 105
Query: 845 EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 904
+ LH A K + ++ +LLL+HGA + T + R+ + K+ ++ LL+ A
Sbjct: 106 LWKFTPLHEAAAKGKYEICKLLLQHGA--DPTKKNRDGNTPLDLVKDGDTDIQDLLRGDA 163
Query: 905 SI 906
++
Sbjct: 164 AL 165
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 60/121 (49%), Gaps = 4/121 (3%)
Query: 851 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 910
LH A NR+ VVE LL+HGA + A + LH AC +V ELL+KHGA +
Sbjct: 46 LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD 105
Query: 911 EVREPMLHIACKKNRIKVVELLLKHGASSHVVSCYSNVKVHVSLNKIQDVSSSILRLATC 970
+ LH A K + ++ +LLL+HGA N + L+ ++D + I L
Sbjct: 106 LWKFTPLHEAAAKGKYEICKLLLQHGAD----PTKKNRDGNTPLDLVKDGDTDIQDLLRG 161
Query: 971 D 971
D
Sbjct: 162 D 162
Score = 63.5 bits (153), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 48/92 (52%)
Query: 1137 TPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDT 1196
TPLH +A + LL+HGADV K GL PLH VAELL+K+ A V+
Sbjct: 44 TPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNV 103
Query: 1197 PTKKGFTPLHIACHYGQISMARLLLDQSANVT 1228
FTPLH A G+ + +LLL A+ T
Sbjct: 104 ADLWKFTPLHEAAAKGKYEICKLLLQHGADPT 135
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 60/118 (50%), Gaps = 3/118 (2%)
Query: 1260 TPLHHSAQQGHSTIVALLLDRGASPNATNKG-FTPLHHSAQQGHSTIVALLLDRGASPNA 1318
TPLH +A ++V LL GA +A +KG PLH++ GH + LL+ GA N
Sbjct: 44 TPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNV 103
Query: 1319 TNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALL 1376
+ + FTPLH A G+ + +LLL A+ + G TPL + G + I LL
Sbjct: 104 ADLWK-FTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPL-DLVKDGDTDIQDLL 159
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 64/131 (48%), Gaps = 15/131 (11%)
Query: 35 TPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISS 94
TPLH AA + + ++V LL GA++ K + GL LH A GH V E+L++ GA ++
Sbjct: 44 TPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVN- 102
Query: 95 KTKVRGFYILRSGHEAVIEMLLEQGAPISSKTKVAAVLLENGASLTSTTKKGFTPLHLTG 154
V + HEA + K ++ +LL++GA T + G TPL L
Sbjct: 103 ---VADLWKFTPLHEAAAK----------GKYEICKLLLQHGADPTKKNRDGNTPLDLV- 148
Query: 155 KYGHIKVAKLL 165
K G + LL
Sbjct: 149 KDGDTDIQDLL 159
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 63/124 (50%), Gaps = 2/124 (1%)
Query: 189 TALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEA 248
T LH AA V + LL AD +A+ G PLH AC +V ELL+KHGA +
Sbjct: 44 TPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNV 103
Query: 249 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 308
+ LH A K + ++ +LLL+HGA + T + R+ + K+ ++ LL+
Sbjct: 104 ADLWKFTPLHEAAAKGKYEICKLLLQHGA--DPTKKNRDGNTPLDLVKDGDTDIQDLLRG 161
Query: 309 GASI 312
A++
Sbjct: 162 DAAL 165
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 64/130 (49%), Gaps = 14/130 (10%)
Query: 1025 TALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDF 1084
T LH AA + V LL++GA + + K G PLH YGH +VA+LL++ A V+
Sbjct: 44 TPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNV 103
Query: 1085 QGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSAS 1144
TPLH A+ KG +I LL++GA P ++ G TPL L
Sbjct: 104 ADLWKFTPLHEAA------------AKG-KYEICKLLLQHGADPTKKNRDGNTPLDL-VK 149
Query: 1145 EGHADMSAML 1154
+G D+ +L
Sbjct: 150 DGDTDIQDLL 159
Score = 60.8 bits (146), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 65/125 (52%), Gaps = 14/125 (11%)
Query: 1083 DFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLS 1142
D +G+ TPLH A+ Y+ + + LL++GA +A+ G PLH +
Sbjct: 37 DIEGRQS-TPLHFAAGYNR-------------VSVVEYLLQHGADVHAKDKGGLVPLHNA 82
Query: 1143 ASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGF 1202
S GH +++ +L++HGA V+ A TPLH A + + + +LLL++ A + G
Sbjct: 83 CSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGN 142
Query: 1203 TPLHI 1207
TPL +
Sbjct: 143 TPLDL 147
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 54/129 (41%), Gaps = 26/129 (20%)
Query: 1203 TPLHIACHYGQISMARLLLDQSANVTVPKNFPSRXXXXXXXXXXXXXXYTNTTDQGFTPL 1262
TPLH A Y ++S+ LL A+V G PL
Sbjct: 44 TPLHFAAGYNRVSVVEYLLQHGADVHAKDK------------------------GGLVPL 79
Query: 1263 HHSAQQGHSTIVALLLDRGASPNATN-KGFTPLHHSAQQGHSTIVALLLDRGASPNATNK 1321
H++ GH + LL+ GA N + FTPLH +A +G I LLL GA P N+
Sbjct: 80 HNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNR 139
Query: 1322 TRGFTPLHI 1330
G TPL +
Sbjct: 140 D-GNTPLDL 147
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 63/132 (47%), Gaps = 10/132 (7%)
Query: 148 TPLHLTGKYGHIKVAKLLLQKDAPVDFQGKAPVDDVTVDYLTALHVAAHCGHARVAKTLL 207
TPLH Y + V + LLQ A V + K L LH A GH VA+ L+
Sbjct: 44 TPLHFAAGYNRVSVVEYLLQHGADVHAKDKGG--------LVPLHNACSYGHYEVAELLV 95
Query: 208 DKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIK 267
A N L FTPLH A K + ++ +LLL+HGA + T + R+ + K+
Sbjct: 96 KHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGA--DPTKKNRDGNTPLDLVKDGDT 153
Query: 268 VVELLLKHGASI 279
++ LL+ A++
Sbjct: 154 DIQDLLRGDAAL 165
Score = 53.9 bits (128), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 58/116 (50%), Gaps = 9/116 (7%)
Query: 124 SKTKVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKAPVDDV 183
++ V LL++GA + + K G PLH YGH +VA+LL++ A V+ V D+
Sbjct: 53 NRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVN------VADL 106
Query: 184 TVDYLTALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELL 239
T LH AA G + K LL ADP + +G TPL + K + +LL
Sbjct: 107 W--KFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLV-KDGDTDIQDLL 159
Score = 47.0 bits (110), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 32/65 (49%)
Query: 1323 RGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGAS 1382
R TPLH A Y ++S+ LL A+V G PLH++ GH + LL+ GA
Sbjct: 41 RQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAV 100
Query: 1383 PNATN 1387
N +
Sbjct: 101 VNVAD 105
Score = 34.3 bits (77), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%)
Query: 33 NITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPI 92
+ PLH A +G + LL+ GA ++ T LH AA G + ++LL+ GA
Sbjct: 75 GLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADP 134
Query: 93 SSKTK 97
+ K +
Sbjct: 135 TKKNR 139
>pdb|3TWU|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex
With Peptide From Human Mcl1
Length = 167
Score = 77.0 bits (188), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 65/122 (53%), Gaps = 13/122 (10%)
Query: 1058 TPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDI 1117
TPLH Y + V + LLQ A V + K G+ PLH A Y H VA LL++ GA +++
Sbjct: 46 TPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNV 105
Query: 1118 ATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQ 1177
A + FTPLH +A++G ++ +LL+HGAD + ++G TPL L
Sbjct: 106 A-------------DLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD 152
Query: 1178 ED 1179
D
Sbjct: 153 GD 154
Score = 73.2 bits (178), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 71/134 (52%), Gaps = 4/134 (2%)
Query: 214 NARALNG--FTPLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVEL 271
N R + G TPLH A NR+ VVE LL+HGA + A + LH AC +V EL
Sbjct: 36 NCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAEL 95
Query: 272 LLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNR 331
L+KHGA + + LH A K + ++ +LLL+HGA + T + R+ + K+
Sbjct: 96 LVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGA--DPTKKNRDGNTPLDLVKDG 153
Query: 332 IKVVELLLKHGASI 345
++ LL+ A++
Sbjct: 154 DTDIQDLLRGDAAL 167
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 62/141 (43%), Gaps = 26/141 (18%)
Query: 1170 TPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTV 1229
TPLH A +RV V E LL++ A V K G PLH AC YG +A LL+ A V V
Sbjct: 46 TPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNV 105
Query: 1230 PKNFPSRXXXXXXXXXXXXXXYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATNK 1289
+ FTPLH +A +G I LLL GA P N+
Sbjct: 106 ADLWK------------------------FTPLHEAAAKGKYEICKLLLQHGADPTKKNR 141
Query: 1290 -GFTPLHHSAQQGHSTIVALL 1309
G TPL + G + I LL
Sbjct: 142 DGNTPL-DLVKDGDTDIQDLL 161
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 51/97 (52%), Gaps = 1/97 (1%)
Query: 1292 TPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVS 1351
TPLH +A ++V LL GA +A +K G PLH AC YG +A LL+ A V+
Sbjct: 46 TPLHFAAGYNRVSVVEYLLQHGADVHAKDKG-GLVPLHNACSYGHYEVAELLVKHGAVVN 104
Query: 1352 CTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATNK 1388
FTPLH +A +G I LLL GA P N+
Sbjct: 105 VADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNR 141
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 57/111 (51%)
Query: 990 QQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASL 1049
Q TPLH A+ V +V LLQHGA V + K LH A G EVA +L+++GA +
Sbjct: 44 QSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVV 103
Query: 1050 TSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYD 1100
FTPLH G ++ KLLLQ A + ++G TPL + D
Sbjct: 104 NVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKDGD 154
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 290 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 349
LH A NR+ VVE LL+HGA + A + LH AC +V ELL+KHGA +
Sbjct: 48 LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD 107
Query: 350 EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 409
+ LH A K + ++ +LLL+HGA + T + R+ + K+ ++ LL+ A
Sbjct: 108 LWKFTPLHEAAAKGKYEICKLLLQHGA--DPTKKNRDGNTPLDLVKDGDTDIQDLLRGDA 165
Query: 410 SI 411
++
Sbjct: 166 AL 167
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 323 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 382
LH A NR+ VVE LL+HGA + A + LH AC +V ELL+KHGA +
Sbjct: 48 LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD 107
Query: 383 EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 442
+ LH A K + ++ +LLL+HGA + T + R+ + K+ ++ LL+ A
Sbjct: 108 LWKFTPLHEAAAKGKYEICKLLLQHGA--DPTKKNRDGNTPLDLVKDGDTDIQDLLRGDA 165
Query: 443 SI 444
++
Sbjct: 166 AL 167
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 356 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 415
LH A NR+ VVE LL+HGA + A + LH AC +V ELL+KHGA +
Sbjct: 48 LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD 107
Query: 416 EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 475
+ LH A K + ++ +LLL+HGA + T + R+ + K+ ++ LL+ A
Sbjct: 108 LWKFTPLHEAAAKGKYEICKLLLQHGA--DPTKKNRDGNTPLDLVKDGDTDIQDLLRGDA 165
Query: 476 SI 477
++
Sbjct: 166 AL 167
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 389 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 448
LH A NR+ VVE LL+HGA + A + LH AC +V ELL+KHGA +
Sbjct: 48 LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD 107
Query: 449 EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 508
+ LH A K + ++ +LLL+HGA + T + R+ + K+ ++ LL+ A
Sbjct: 108 LWKFTPLHEAAAKGKYEICKLLLQHGA--DPTKKNRDGNTPLDLVKDGDTDIQDLLRGDA 165
Query: 509 SI 510
++
Sbjct: 166 AL 167
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 422 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 481
LH A NR+ VVE LL+HGA + A + LH AC +V ELL+KHGA +
Sbjct: 48 LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD 107
Query: 482 EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 541
+ LH A K + ++ +LLL+HGA + T + R+ + K+ ++ LL+ A
Sbjct: 108 LWKFTPLHEAAAKGKYEICKLLLQHGA--DPTKKNRDGNTPLDLVKDGDTDIQDLLRGDA 165
Query: 542 SI 543
++
Sbjct: 166 AL 167
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 455 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 514
LH A NR+ VVE LL+HGA + A + LH AC +V ELL+KHGA +
Sbjct: 48 LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD 107
Query: 515 EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 574
+ LH A K + ++ +LLL+HGA + T + R+ + K+ ++ LL+ A
Sbjct: 108 LWKFTPLHEAAAKGKYEICKLLLQHGA--DPTKKNRDGNTPLDLVKDGDTDIQDLLRGDA 165
Query: 575 SI 576
++
Sbjct: 166 AL 167
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 488 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 547
LH A NR+ VVE LL+HGA + A + LH AC +V ELL+KHGA +
Sbjct: 48 LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD 107
Query: 548 EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 607
+ LH A K + ++ +LLL+HGA + T + R+ + K+ ++ LL+ A
Sbjct: 108 LWKFTPLHEAAAKGKYEICKLLLQHGA--DPTKKNRDGNTPLDLVKDGDTDIQDLLRGDA 165
Query: 608 SI 609
++
Sbjct: 166 AL 167
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 521 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 580
LH A NR+ VVE LL+HGA + A + LH AC +V ELL+KHGA +
Sbjct: 48 LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD 107
Query: 581 EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 640
+ LH A K + ++ +LLL+HGA + T + R+ + K+ ++ LL+ A
Sbjct: 108 LWKFTPLHEAAAKGKYEICKLLLQHGA--DPTKKNRDGNTPLDLVKDGDTDIQDLLRGDA 165
Query: 641 SI 642
++
Sbjct: 166 AL 167
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 554 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 613
LH A NR+ VVE LL+HGA + A + LH AC +V ELL+KHGA +
Sbjct: 48 LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD 107
Query: 614 EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 673
+ LH A K + ++ +LLL+HGA + T + R+ + K+ ++ LL+ A
Sbjct: 108 LWKFTPLHEAAAKGKYEICKLLLQHGA--DPTKKNRDGNTPLDLVKDGDTDIQDLLRGDA 165
Query: 674 SI 675
++
Sbjct: 166 AL 167
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 587 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 646
LH A NR+ VVE LL+HGA + A + LH AC +V ELL+KHGA +
Sbjct: 48 LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD 107
Query: 647 EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 706
+ LH A K + ++ +LLL+HGA + T + R+ + K+ ++ LL+ A
Sbjct: 108 LWKFTPLHEAAAKGKYEICKLLLQHGA--DPTKKNRDGNTPLDLVKDGDTDIQDLLRGDA 165
Query: 707 SI 708
++
Sbjct: 166 AL 167
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 620 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 679
LH A NR+ VVE LL+HGA + A + LH AC +V ELL+KHGA +
Sbjct: 48 LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD 107
Query: 680 EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 739
+ LH A K + ++ +LLL+HGA + T + R+ + K+ ++ LL+ A
Sbjct: 108 LWKFTPLHEAAAKGKYEICKLLLQHGA--DPTKKNRDGNTPLDLVKDGDTDIQDLLRGDA 165
Query: 740 SI 741
++
Sbjct: 166 AL 167
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 653 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 712
LH A NR+ VVE LL+HGA + A + LH AC +V ELL+KHGA +
Sbjct: 48 LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD 107
Query: 713 EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 772
+ LH A K + ++ +LLL+HGA + T + R+ + K+ ++ LL+ A
Sbjct: 108 LWKFTPLHEAAAKGKYEICKLLLQHGA--DPTKKNRDGNTPLDLVKDGDTDIQDLLRGDA 165
Query: 773 SI 774
++
Sbjct: 166 AL 167
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 686 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 745
LH A NR+ VVE LL+HGA + A + LH AC +V ELL+KHGA +
Sbjct: 48 LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD 107
Query: 746 EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 805
+ LH A K + ++ +LLL+HGA + T + R+ + K+ ++ LL+ A
Sbjct: 108 LWKFTPLHEAAAKGKYEICKLLLQHGA--DPTKKNRDGNTPLDLVKDGDTDIQDLLRGDA 165
Query: 806 SI 807
++
Sbjct: 166 AL 167
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 719 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 778
LH A NR+ VVE LL+HGA + A + LH AC +V ELL+KHGA +
Sbjct: 48 LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD 107
Query: 779 EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 838
+ LH A K + ++ +LLL+HGA + T + R+ + K+ ++ LL+ A
Sbjct: 108 LWKFTPLHEAAAKGKYEICKLLLQHGA--DPTKKNRDGNTPLDLVKDGDTDIQDLLRGDA 165
Query: 839 SI 840
++
Sbjct: 166 AL 167
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 752 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 811
LH A NR+ VVE LL+HGA + A + LH AC +V ELL+KHGA +
Sbjct: 48 LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD 107
Query: 812 EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 871
+ LH A K + ++ +LLL+HGA + T + R+ + K+ ++ LL+ A
Sbjct: 108 LWKFTPLHEAAAKGKYEICKLLLQHGA--DPTKKNRDGNTPLDLVKDGDTDIQDLLRGDA 165
Query: 872 SI 873
++
Sbjct: 166 AL 167
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 785 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 844
LH A NR+ VVE LL+HGA + A + LH AC +V ELL+KHGA +
Sbjct: 48 LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD 107
Query: 845 EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 904
+ LH A K + ++ +LLL+HGA + T + R+ + K+ ++ LL+ A
Sbjct: 108 LWKFTPLHEAAAKGKYEICKLLLQHGA--DPTKKNRDGNTPLDLVKDGDTDIQDLLRGDA 165
Query: 905 SI 906
++
Sbjct: 166 AL 167
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 60/121 (49%), Gaps = 4/121 (3%)
Query: 851 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 910
LH A NR+ VVE LL+HGA + A + LH AC +V ELL+KHGA +
Sbjct: 48 LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD 107
Query: 911 EVREPMLHIACKKNRIKVVELLLKHGASSHVVSCYSNVKVHVSLNKIQDVSSSILRLATC 970
+ LH A K + ++ +LLL+HGA N + L+ ++D + I L
Sbjct: 108 LWKFTPLHEAAAKGKYEICKLLLQHGAD----PTKKNRDGNTPLDLVKDGDTDIQDLLRG 163
Query: 971 D 971
D
Sbjct: 164 D 164
Score = 63.5 bits (153), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 48/92 (52%)
Query: 1137 TPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDT 1196
TPLH +A + LL+HGADV K GL PLH VAELL+K+ A V+
Sbjct: 46 TPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNV 105
Query: 1197 PTKKGFTPLHIACHYGQISMARLLLDQSANVT 1228
FTPLH A G+ + +LLL A+ T
Sbjct: 106 ADLWKFTPLHEAAAKGKYEICKLLLQHGADPT 137
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 60/118 (50%), Gaps = 3/118 (2%)
Query: 1260 TPLHHSAQQGHSTIVALLLDRGASPNATNKG-FTPLHHSAQQGHSTIVALLLDRGASPNA 1318
TPLH +A ++V LL GA +A +KG PLH++ GH + LL+ GA N
Sbjct: 46 TPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNV 105
Query: 1319 TNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALL 1376
+ + FTPLH A G+ + +LLL A+ + G TPL + G + I LL
Sbjct: 106 ADLWK-FTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPL-DLVKDGDTDIQDLL 161
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 64/131 (48%), Gaps = 15/131 (11%)
Query: 35 TPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISS 94
TPLH AA + + ++V LL GA++ K + GL LH A GH V E+L++ GA ++
Sbjct: 46 TPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVN- 104
Query: 95 KTKVRGFYILRSGHEAVIEMLLEQGAPISSKTKVAAVLLENGASLTSTTKKGFTPLHLTG 154
V + HEA + K ++ +LL++GA T + G TPL L
Sbjct: 105 ---VADLWKFTPLHEAAAK----------GKYEICKLLLQHGADPTKKNRDGNTPLDLV- 150
Query: 155 KYGHIKVAKLL 165
K G + LL
Sbjct: 151 KDGDTDIQDLL 161
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 63/124 (50%), Gaps = 2/124 (1%)
Query: 189 TALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEA 248
T LH AA V + LL AD +A+ G PLH AC +V ELL+KHGA +
Sbjct: 46 TPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNV 105
Query: 249 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 308
+ LH A K + ++ +LLL+HGA + T + R+ + K+ ++ LL+
Sbjct: 106 ADLWKFTPLHEAAAKGKYEICKLLLQHGA--DPTKKNRDGNTPLDLVKDGDTDIQDLLRG 163
Query: 309 GASI 312
A++
Sbjct: 164 DAAL 167
Score = 60.8 bits (146), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 64/130 (49%), Gaps = 14/130 (10%)
Query: 1025 TALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDF 1084
T LH AA + V LL++GA + + K G PLH YGH +VA+LL++ A V+
Sbjct: 46 TPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNV 105
Query: 1085 QGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSAS 1144
TPLH A+ KG +I LL++GA P ++ G TPL L
Sbjct: 106 ADLWKFTPLHEAA------------AKG-KYEICKLLLQHGADPTKKNRDGNTPLDL-VK 151
Query: 1145 EGHADMSAML 1154
+G D+ +L
Sbjct: 152 DGDTDIQDLL 161
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 65/125 (52%), Gaps = 14/125 (11%)
Query: 1083 DFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLS 1142
D +G+ TPLH A+ Y+ + + LL++GA +A+ G PLH +
Sbjct: 39 DIEGRQS-TPLHFAAGYNR-------------VSVVEYLLQHGADVHAKDKGGLVPLHNA 84
Query: 1143 ASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGF 1202
S GH +++ +L++HGA V+ A TPLH A + + + +LLL++ A + G
Sbjct: 85 CSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGN 144
Query: 1203 TPLHI 1207
TPL +
Sbjct: 145 TPLDL 149
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 54/129 (41%), Gaps = 26/129 (20%)
Query: 1203 TPLHIACHYGQISMARLLLDQSANVTVPKNFPSRXXXXXXXXXXXXXXYTNTTDQGFTPL 1262
TPLH A Y ++S+ LL A+V G PL
Sbjct: 46 TPLHFAAGYNRVSVVEYLLQHGADVHAKDK------------------------GGLVPL 81
Query: 1263 HHSAQQGHSTIVALLLDRGASPNATN-KGFTPLHHSAQQGHSTIVALLLDRGASPNATNK 1321
H++ GH + LL+ GA N + FTPLH +A +G I LLL GA P N+
Sbjct: 82 HNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNR 141
Query: 1322 TRGFTPLHI 1330
G TPL +
Sbjct: 142 D-GNTPLDL 149
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 63/132 (47%), Gaps = 10/132 (7%)
Query: 148 TPLHLTGKYGHIKVAKLLLQKDAPVDFQGKAPVDDVTVDYLTALHVAAHCGHARVAKTLL 207
TPLH Y + V + LLQ A V + K L LH A GH VA+ L+
Sbjct: 46 TPLHFAAGYNRVSVVEYLLQHGADVHAKDKGG--------LVPLHNACSYGHYEVAELLV 97
Query: 208 DKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIK 267
A N L FTPLH A K + ++ +LLL+HGA + T + R+ + K+
Sbjct: 98 KHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGA--DPTKKNRDGNTPLDLVKDGDT 155
Query: 268 VVELLLKHGASI 279
++ LL+ A++
Sbjct: 156 DIQDLLRGDAAL 167
Score = 53.9 bits (128), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 58/116 (50%), Gaps = 9/116 (7%)
Query: 124 SKTKVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKAPVDDV 183
++ V LL++GA + + K G PLH YGH +VA+LL++ A V+ V D+
Sbjct: 55 NRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVN------VADL 108
Query: 184 TVDYLTALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELL 239
T LH AA G + K LL ADP + +G TPL + K + +LL
Sbjct: 109 W--KFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLV-KDGDTDIQDLL 161
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 32/65 (49%)
Query: 1323 RGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGAS 1382
R TPLH A Y ++S+ LL A+V G PLH++ GH + LL+ GA
Sbjct: 43 RQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAV 102
Query: 1383 PNATN 1387
N +
Sbjct: 103 VNVAD 107
Score = 33.9 bits (76), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%)
Query: 33 NITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPI 92
+ PLH A +G + LL+ GA ++ T LH AA G + ++LL+ GA
Sbjct: 77 GLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADP 136
Query: 93 SSKTK 97
+ K +
Sbjct: 137 TKKNR 141
>pdb|2Y0B|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4_s76r
pdb|2Y0B|H Chain H, Caspase-3 In Complex With An Inhibitory Darpin-3.4_s76r
Length = 136
Score = 76.6 bits (187), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 70/133 (52%), Gaps = 13/133 (9%)
Query: 1022 DLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAP 1081
DL L A + GQ++ +L+ NGA + + G TPLHL K GH+++ ++LL+ A
Sbjct: 13 DLGKKLLEATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGAD 72
Query: 1082 VDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHL 1141
V+ + G TPLH+A+ H ++I LLEYGA NA+ G T +
Sbjct: 73 VNARDIWGRTPLHLAATVGH-------------LEIVEVLLEYGADVNAQDKFGKTAFDI 119
Query: 1142 SASEGHADMSAML 1154
S G+ D++ +L
Sbjct: 120 SIDNGNEDLAEIL 132
Score = 70.5 bits (171), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 56/100 (56%)
Query: 1121 LLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDR 1180
L+ GA NA AG TPLHL+A GH ++ +LL+HGADV+ G TPLHL A
Sbjct: 33 LMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNARDIWGRTPLHLAATVGH 92
Query: 1181 VGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLL 1220
+ + E+LL+ A V+ K G T I+ G +A +L
Sbjct: 93 LEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEIL 132
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 66/112 (58%)
Query: 997 ASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKG 1056
A+R G D V +L+ +GA V++ T LH+AAK G E+ VLL++GA + + G
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNARDIWG 80
Query: 1057 FTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLL 1108
TPLHL GH+++ ++LL+ A V+ Q K G T ++ ++++A +L
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEIL 132
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 59/114 (51%)
Query: 194 AAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVR 253
A G + L+ AD NA G TPLH+A K+ +++VE+LLKHGA + A
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNARDIWG 80
Query: 254 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 307
LH+A +++VE+LL++GA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 65/127 (51%), Gaps = 13/127 (10%)
Query: 1065 KYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEY 1124
+ G ++L+ A V+ GVTPLH+A+ H ++I LL++
Sbjct: 23 RAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGH-------------LEIVEVLLKH 69
Query: 1125 GAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVA 1184
GA NA + G TPLHL+A+ GH ++ +LLE+GADV+ K G T + +A
Sbjct: 70 GADVNARDIWGRTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLA 129
Query: 1185 ELLLKNN 1191
E+L K N
Sbjct: 130 EILQKLN 136
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 1256 DQGFTPLHHSAQQGHSTIVALLLDRGASPNATN-KGFTPLHHSAQQGHSTIVALLLDRGA 1314
D G TPLH +A++GH IV +LL GA NA + G TPLH +A GH IV +LL+ GA
Sbjct: 45 DAGVTPLHLAAKRGHLEIVEVLLKHGADVNARDIWGRTPLHLAATVGHLEIVEVLLEYGA 104
Query: 1315 SPNATNKTRGFTPLHIACHYGQISMARLL 1343
NA +K G T I+ G +A +L
Sbjct: 105 DVNAQDKF-GKTAFDISIDNGNEDLAEIL 132
Score = 63.5 bits (153), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 14/114 (12%)
Query: 131 VLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPV---DFQGKAPVDDVTVDY 187
+L+ NGA + + G TPLHL K GH+++ ++LL+ A V D G+ P
Sbjct: 32 ILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNARDIWGRTP-------- 83
Query: 188 LTALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLK 241
LH+AA GH + + LL+ AD NA+ G T I+ + E+L K
Sbjct: 84 ---LHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 60/114 (52%)
Query: 227 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 286
A + + V +L+ +GA + A + LH+A K+ +++VE+LLKHGA + A
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNARDIWG 80
Query: 287 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 340
LH+A +++VE+LL++GA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 60/114 (52%)
Query: 260 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 319
A + + V +L+ +GA + A + LH+A K+ +++VE+LLKHGA + A
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNARDIWG 80
Query: 320 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 373
LH+A +++VE+LL++GA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 60/114 (52%)
Query: 293 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 352
A + + V +L+ +GA + A + LH+A K+ +++VE+LLKHGA + A
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNARDIWG 80
Query: 353 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 406
LH+A +++VE+LL++GA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 60/114 (52%)
Query: 326 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 385
A + + V +L+ +GA + A + LH+A K+ +++VE+LLKHGA + A
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNARDIWG 80
Query: 386 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 439
LH+A +++VE+LL++GA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 60/114 (52%)
Query: 359 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 418
A + + V +L+ +GA + A + LH+A K+ +++VE+LLKHGA + A
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNARDIWG 80
Query: 419 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 472
LH+A +++VE+LL++GA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 60/114 (52%)
Query: 392 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 451
A + + V +L+ +GA + A + LH+A K+ +++VE+LLKHGA + A
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNARDIWG 80
Query: 452 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 505
LH+A +++VE+LL++GA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 60/114 (52%)
Query: 425 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 484
A + + V +L+ +GA + A + LH+A K+ +++VE+LLKHGA + A
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNARDIWG 80
Query: 485 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 538
LH+A +++VE+LL++GA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 60/114 (52%)
Query: 458 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 517
A + + V +L+ +GA + A + LH+A K+ +++VE+LLKHGA + A
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNARDIWG 80
Query: 518 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 571
LH+A +++VE+LL++GA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 60/114 (52%)
Query: 491 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 550
A + + V +L+ +GA + A + LH+A K+ +++VE+LLKHGA + A
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNARDIWG 80
Query: 551 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 604
LH+A +++VE+LL++GA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 60/114 (52%)
Query: 524 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 583
A + + V +L+ +GA + A + LH+A K+ +++VE+LLKHGA + A
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNARDIWG 80
Query: 584 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 637
LH+A +++VE+LL++GA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 60/114 (52%)
Query: 557 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 616
A + + V +L+ +GA + A + LH+A K+ +++VE+LLKHGA + A
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNARDIWG 80
Query: 617 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 670
LH+A +++VE+LL++GA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 60/114 (52%)
Query: 590 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 649
A + + V +L+ +GA + A + LH+A K+ +++VE+LLKHGA + A
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNARDIWG 80
Query: 650 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 703
LH+A +++VE+LL++GA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 60/114 (52%)
Query: 623 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 682
A + + V +L+ +GA + A + LH+A K+ +++VE+LLKHGA + A
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNARDIWG 80
Query: 683 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 736
LH+A +++VE+LL++GA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 60/114 (52%)
Query: 656 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 715
A + + V +L+ +GA + A + LH+A K+ +++VE+LLKHGA + A
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNARDIWG 80
Query: 716 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 769
LH+A +++VE+LL++GA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 60/114 (52%)
Query: 689 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 748
A + + V +L+ +GA + A + LH+A K+ +++VE+LLKHGA + A
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNARDIWG 80
Query: 749 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 802
LH+A +++VE+LL++GA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 60/114 (52%)
Query: 722 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 781
A + + V +L+ +GA + A + LH+A K+ +++VE+LLKHGA + A
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNARDIWG 80
Query: 782 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 835
LH+A +++VE+LL++GA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 60/114 (52%)
Query: 755 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 814
A + + V +L+ +GA + A + LH+A K+ +++VE+LLKHGA + A
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNARDIWG 80
Query: 815 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 868
LH+A +++VE+LL++GA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 60/114 (52%)
Query: 788 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 847
A + + V +L+ +GA + A + LH+A K+ +++VE+LLKHGA + A
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNARDIWG 80
Query: 848 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 901
LH+A +++VE+LL++GA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 60/114 (52%)
Query: 821 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 880
A + + V +L+ +GA + A + LH+A K+ +++VE+LLKHGA + A
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNARDIWG 80
Query: 881 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 934
LH+A +++VE+LL++GA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 60/116 (51%), Gaps = 2/116 (1%)
Query: 1262 LHHSAQQGHSTIVALLLDRGASPNATNK-GFTPLHHSAQQGHSTIVALLLDRGASPNATN 1320
L + + G V +L+ GA NA + G TPLH +A++GH IV +LL GA NA +
Sbjct: 18 LLEATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNARD 77
Query: 1321 KTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALL 1376
G TPLH+A G + + +LL+ A+V+ G T S G+ + +L
Sbjct: 78 -IWGRTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEIL 132
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 49/88 (55%)
Query: 1146 GHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPL 1205
G D +L+ +GADV+ G+TPLHL A+ + + E+LLK+ A V+ G TPL
Sbjct: 25 GQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNARDIWGRTPL 84
Query: 1206 HIACHYGQISMARLLLDQSANVTVPKNF 1233
H+A G + + +LL+ A+V F
Sbjct: 85 HLAATVGHLEIVEVLLEYGADVNAQDKF 112
Score = 60.5 bits (145), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Query: 1294 LHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCT 1353
L + + G V +L+ GA NA + G TPLH+A G + + +LL A+V+
Sbjct: 18 LLEATRAGQDDEVRILMANGADVNAMDDA-GVTPLHLAAKRGHLEIVEVLLKHGADVNAR 76
Query: 1354 TDQGFTPLHHSAQQGHSTIVALLLDRGASPNATNK 1388
G TPLH +A GH IV +LL+ GA NA +K
Sbjct: 77 DIWGRTPLHLAATVGHLEIVEVLLEYGADVNAQDK 111
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 61/120 (50%), Gaps = 8/120 (6%)
Query: 155 KYGHIKVAKLLLQKDAPVDFQGKAPVDDVTVDYLTALHVAAHCGHARVAKTLLDKKADPN 214
+ G ++L+ A V+ +DD V T LH+AA GH + + LL AD N
Sbjct: 23 RAGQDDEVRILMANGADVN-----AMDDAGV---TPLHLAAKRGHLEIVEVLLKHGADVN 74
Query: 215 ARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 274
AR + G TPLH+A +++VE+LL++GA + A + + I+ + E+L K
Sbjct: 75 ARDIWGRTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 60/113 (53%)
Query: 854 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 913
A + + V +L+ +GA + A + LH+A K+ +++VE+LLKHGA + A
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNARDIWG 80
Query: 914 EPMLHIACKKNRIKVVELLLKHGASSHVVSCYSNVKVHVSLNKIQDVSSSILR 966
LH+A +++VE+LL++GA + + +S++ + + IL+
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQ 133
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 70/156 (44%), Gaps = 44/156 (28%)
Query: 887 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASSHVVSCYS 946
A + + V +L+ +GA + A + LH+A K+ +++VE+LLKHGA + +
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNARDIWG 80
Query: 947 NVKVHVSLNKIQDVSSSILRLATCDVLPQCETRLNFSNLRVREQQTPLHIASRLGNVDIV 1006
+TPLH+A+ +G+++IV
Sbjct: 81 --------------------------------------------RTPLHLAATVGHLEIV 96
Query: 1007 MLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVL 1042
+LL++GA V++ K TA I+ G E++A +L
Sbjct: 97 EVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEIL 132
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 55/86 (63%), Gaps = 4/86 (4%)
Query: 992 TPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLY--TALHIAAKEGQEEVAAVLLENGASL 1049
TPLH+A++ G+++IV +LL+HGA D +D++ T LH+AA G E+ VLLE GA +
Sbjct: 49 TPLHLAAKRGHLEIVEVLLKHGA--DVNARDIWGRTPLHLAATVGHLEIVEVLLEYGADV 106
Query: 1050 TSTTKKGFTPLHLTGKYGHIKVAKLL 1075
+ K G T ++ G+ +A++L
Sbjct: 107 NAQDKFGKTAFDISIDNGNEDLAEIL 132
Score = 57.0 bits (136), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 54/85 (63%), Gaps = 3/85 (3%)
Query: 34 ITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPIS 93
+TPLH+AAK G +V +LL GA+++ + G T LH AA GH ++E+LLE GA ++
Sbjct: 48 VTPLHLAAKRGHLEIVEVLLKHGADVNARDIWGRTPLHLAATVGHLEIVEVLLEYGADVN 107
Query: 94 SKTKV--RGFYI-LRSGHEAVIEML 115
++ K F I + +G+E + E+L
Sbjct: 108 AQDKFGKTAFDISIDNGNEDLAEIL 132
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 57/94 (60%), Gaps = 5/94 (5%)
Query: 40 AAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISSKTKVR 99
A + G+ + V +L++ GA+++ G+T LH AA+ GH ++E+LL+ GA ++++ +
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNAR-DIW 79
Query: 100 GFYILR----SGHEAVIEMLLEQGAPISSKTKVA 129
G L GH ++E+LLE GA ++++ K
Sbjct: 80 GRTPLHLAATVGHLEIVEVLLEYGADVNAQDKFG 113
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 26/121 (21%)
Query: 73 AARSGHEAVIEMLLEQGAPISSKTKVRGFYIL----RSGHEAVIEMLLEQGAPISSKTKV 128
A R+G + + +L+ GA +++ G L + GH ++E+LL+ GA ++++
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDA-GVTPLHLAAKRGHLEIVEVLLKHGADVNARDIW 79
Query: 129 AAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQ---GKAPVDDVTV 185
G TPLHL GH+++ ++LL+ A V+ Q GK D+++
Sbjct: 80 -----------------GRTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAF-DISI 121
Query: 186 D 186
D
Sbjct: 122 D 122
>pdb|2XZT|G Chain G, Caspase-3 In Complex With Darpin-3.4_i78s
pdb|2XZT|H Chain H, Caspase-3 In Complex With Darpin-3.4_i78s
Length = 136
Score = 76.6 bits (187), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 69/133 (51%), Gaps = 13/133 (9%)
Query: 1022 DLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAP 1081
DL L A + GQ++ +L+ NGA + + G TPLHL K GH+++ ++LL+ A
Sbjct: 13 DLGKKLLEATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGAD 72
Query: 1082 VDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHL 1141
V+ G TPLH+A+ H ++I LLEYGA NA+ G T +
Sbjct: 73 VNASDSWGRTPLHLAATVGH-------------LEIVEVLLEYGADVNAQDKFGKTAFDI 119
Query: 1142 SASEGHADMSAML 1154
S G+ D++ +L
Sbjct: 120 SIDNGNEDLAEIL 132
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 57/100 (57%)
Query: 1121 LLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDR 1180
L+ GA NA AG TPLHL+A GH ++ +LL+HGADV+ + G TPLHL A
Sbjct: 33 LMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDSWGRTPLHLAATVGH 92
Query: 1181 VGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLL 1220
+ + E+LL+ A V+ K G T I+ G +A +L
Sbjct: 93 LEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEIL 132
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 60/114 (52%)
Query: 194 AAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVR 253
A G + L+ AD NA G TPLH+A K+ +++VE+LLKHGA + A+
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDSWG 80
Query: 254 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 307
LH+A +++VE+LL++GA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 71.2 bits (173), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 67/112 (59%)
Query: 997 ASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKG 1056
A+R G D V +L+ +GA V++ T LH+AAK G E+ VLL++GA + ++ G
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDSWG 80
Query: 1057 FTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLL 1108
TPLHL GH+++ ++LL+ A V+ Q K G T ++ ++++A +L
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEIL 132
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 61/114 (53%)
Query: 227 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 286
A + + V +L+ +GA + A + LH+A K+ +++VE+LLKHGA + A+
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDSWG 80
Query: 287 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 340
LH+A +++VE+LL++GA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 61/114 (53%)
Query: 260 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 319
A + + V +L+ +GA + A + LH+A K+ +++VE+LLKHGA + A+
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDSWG 80
Query: 320 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 373
LH+A +++VE+LL++GA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 61/114 (53%)
Query: 293 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 352
A + + V +L+ +GA + A + LH+A K+ +++VE+LLKHGA + A+
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDSWG 80
Query: 353 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 406
LH+A +++VE+LL++GA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 61/114 (53%)
Query: 326 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 385
A + + V +L+ +GA + A + LH+A K+ +++VE+LLKHGA + A+
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDSWG 80
Query: 386 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 439
LH+A +++VE+LL++GA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 61/114 (53%)
Query: 359 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 418
A + + V +L+ +GA + A + LH+A K+ +++VE+LLKHGA + A+
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDSWG 80
Query: 419 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 472
LH+A +++VE+LL++GA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 61/114 (53%)
Query: 392 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 451
A + + V +L+ +GA + A + LH+A K+ +++VE+LLKHGA + A+
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDSWG 80
Query: 452 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 505
LH+A +++VE+LL++GA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 61/114 (53%)
Query: 425 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 484
A + + V +L+ +GA + A + LH+A K+ +++VE+LLKHGA + A+
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDSWG 80
Query: 485 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 538
LH+A +++VE+LL++GA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 61/114 (53%)
Query: 458 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 517
A + + V +L+ +GA + A + LH+A K+ +++VE+LLKHGA + A+
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDSWG 80
Query: 518 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 571
LH+A +++VE+LL++GA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 61/114 (53%)
Query: 491 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 550
A + + V +L+ +GA + A + LH+A K+ +++VE+LLKHGA + A+
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDSWG 80
Query: 551 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 604
LH+A +++VE+LL++GA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 61/114 (53%)
Query: 524 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 583
A + + V +L+ +GA + A + LH+A K+ +++VE+LLKHGA + A+
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDSWG 80
Query: 584 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 637
LH+A +++VE+LL++GA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 61/114 (53%)
Query: 557 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 616
A + + V +L+ +GA + A + LH+A K+ +++VE+LLKHGA + A+
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDSWG 80
Query: 617 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 670
LH+A +++VE+LL++GA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 61/114 (53%)
Query: 590 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 649
A + + V +L+ +GA + A + LH+A K+ +++VE+LLKHGA + A+
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDSWG 80
Query: 650 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 703
LH+A +++VE+LL++GA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 61/114 (53%)
Query: 623 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 682
A + + V +L+ +GA + A + LH+A K+ +++VE+LLKHGA + A+
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDSWG 80
Query: 683 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 736
LH+A +++VE+LL++GA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 61/114 (53%)
Query: 656 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 715
A + + V +L+ +GA + A + LH+A K+ +++VE+LLKHGA + A+
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDSWG 80
Query: 716 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 769
LH+A +++VE+LL++GA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 61/114 (53%)
Query: 689 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 748
A + + V +L+ +GA + A + LH+A K+ +++VE+LLKHGA + A+
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDSWG 80
Query: 749 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 802
LH+A +++VE+LL++GA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 61/114 (53%)
Query: 722 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 781
A + + V +L+ +GA + A + LH+A K+ +++VE+LLKHGA + A+
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDSWG 80
Query: 782 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 835
LH+A +++VE+LL++GA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 61/114 (53%)
Query: 755 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 814
A + + V +L+ +GA + A + LH+A K+ +++VE+LLKHGA + A+
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDSWG 80
Query: 815 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 868
LH+A +++VE+LL++GA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 61/114 (53%)
Query: 788 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 847
A + + V +L+ +GA + A + LH+A K+ +++VE+LLKHGA + A+
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDSWG 80
Query: 848 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 901
LH+A +++VE+LL++GA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 61/114 (53%)
Query: 821 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 880
A + + V +L+ +GA + A + LH+A K+ +++VE+LLKHGA + A+
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDSWG 80
Query: 881 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 934
LH+A +++VE+LL++GA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Query: 1256 DQGFTPLHHSAQQGHSTIVALLLDRGASPNATNK-GFTPLHHSAQQGHSTIVALLLDRGA 1314
D G TPLH +A++GH IV +LL GA NA++ G TPLH +A GH IV +LL+ GA
Sbjct: 45 DAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDSWGRTPLHLAATVGHLEIVEVLLEYGA 104
Query: 1315 SPNATNKTRGFTPLHIACHYGQISMARLL 1343
NA +K G T I+ G +A +L
Sbjct: 105 DVNAQDKF-GKTAFDISIDNGNEDLAEIL 132
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 64/127 (50%), Gaps = 13/127 (10%)
Query: 1065 KYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEY 1124
+ G ++L+ A V+ GVTPLH+A+ H ++I LL++
Sbjct: 23 RAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGH-------------LEIVEVLLKH 69
Query: 1125 GAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVA 1184
GA NA G TPLHL+A+ GH ++ +LLE+GADV+ K G T + +A
Sbjct: 70 GADVNASDSWGRTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLA 129
Query: 1185 ELLLKNN 1191
E+L K N
Sbjct: 130 EILQKLN 136
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 62/116 (53%), Gaps = 2/116 (1%)
Query: 1262 LHHSAQQGHSTIVALLLDRGASPNATNK-GFTPLHHSAQQGHSTIVALLLDRGASPNATN 1320
L + + G V +L+ GA NA + G TPLH +A++GH IV +LL GA NA++
Sbjct: 18 LLEATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASD 77
Query: 1321 KTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALL 1376
+ G TPLH+A G + + +LL+ A+V+ G T S G+ + +L
Sbjct: 78 -SWGRTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEIL 132
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 61/113 (53%)
Query: 854 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 913
A + + V +L+ +GA + A + LH+A K+ +++VE+LLKHGA + A+
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDSWG 80
Query: 914 EPMLHIACKKNRIKVVELLLKHGASSHVVSCYSNVKVHVSLNKIQDVSSSILR 966
LH+A +++VE+LL++GA + + +S++ + + IL+
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQ 133
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 1294 LHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCT 1353
L + + G V +L+ GA NA + G TPLH+A G + + +LL A+V+ +
Sbjct: 18 LLEATRAGQDDEVRILMANGADVNAMDDA-GVTPLHLAAKRGHLEIVEVLLKHGADVNAS 76
Query: 1354 TDQGFTPLHHSAQQGHSTIVALLLDRGASPNATNK 1388
G TPLH +A GH IV +LL+ GA NA +K
Sbjct: 77 DSWGRTPLHLAATVGHLEIVEVLLEYGADVNAQDK 111
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 49/88 (55%)
Query: 1146 GHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPL 1205
G D +L+ +GADV+ G+TPLHL A+ + + E+LLK+ A V+ G TPL
Sbjct: 25 GQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDSWGRTPL 84
Query: 1206 HIACHYGQISMARLLLDQSANVTVPKNF 1233
H+A G + + +LL+ A+V F
Sbjct: 85 HLAATVGHLEIVEVLLEYGADVNAQDKF 112
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 70/156 (44%), Gaps = 44/156 (28%)
Query: 887 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASSHVVSCYS 946
A + + V +L+ +GA + A + LH+A K+ +++VE+LLKHGA + +
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDSWG 80
Query: 947 NVKVHVSLNKIQDVSSSILRLATCDVLPQCETRLNFSNLRVREQQTPLHIASRLGNVDIV 1006
+TPLH+A+ +G+++IV
Sbjct: 81 --------------------------------------------RTPLHLAATVGHLEIV 96
Query: 1007 MLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVL 1042
+LL++GA V++ K TA I+ G E++A +L
Sbjct: 97 EVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEIL 132
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 54/84 (64%)
Query: 992 TPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTS 1051
TPLH+A++ G+++IV +LL+HGA V+++ T LH+AA G E+ VLLE GA + +
Sbjct: 49 TPLHLAAKRGHLEIVEVLLKHGADVNASDSWGRTPLHLAATVGHLEIVEVLLEYGADVNA 108
Query: 1052 TTKKGFTPLHLTGKYGHIKVAKLL 1075
K G T ++ G+ +A++L
Sbjct: 109 QDKFGKTAFDISIDNGNEDLAEIL 132
Score = 57.0 bits (136), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 53/85 (62%), Gaps = 3/85 (3%)
Query: 34 ITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPIS 93
+TPLH+AAK G +V +LL GA+++ G T LH AA GH ++E+LLE GA ++
Sbjct: 48 VTPLHLAAKRGHLEIVEVLLKHGADVNASDSWGRTPLHLAATVGHLEIVEVLLEYGADVN 107
Query: 94 SKTKV--RGFYI-LRSGHEAVIEML 115
++ K F I + +G+E + E+L
Sbjct: 108 AQDKFGKTAFDISIDNGNEDLAEIL 132
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 8/120 (6%)
Query: 155 KYGHIKVAKLLLQKDAPVDFQGKAPVDDVTVDYLTALHVAAHCGHARVAKTLLDKKADPN 214
+ G ++L+ A V+ +DD V T LH+AA GH + + LL AD N
Sbjct: 23 RAGQDDEVRILMANGADVN-----AMDDAGV---TPLHLAAKRGHLEIVEVLLKHGADVN 74
Query: 215 ARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 274
A G TPLH+A +++VE+LL++GA + A + + I+ + E+L K
Sbjct: 75 ASDSWGRTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 57/93 (61%), Gaps = 3/93 (3%)
Query: 40 AAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPI-SSKTKV 98
A + G+ + V +L++ GA+++ G+T LH AA+ GH ++E+LL+ GA + +S +
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDSWG 80
Query: 99 RGFYILRS--GHEAVIEMLLEQGAPISSKTKVA 129
R L + GH ++E+LLE GA ++++ K
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFG 113
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 20/101 (19%)
Query: 105 RSGHEAVIEMLLEQGAPISSKT----------------KVAAVLLENGASLTSTTKKGFT 148
R+G + + +L+ GA +++ ++ VLL++GA + ++ G T
Sbjct: 23 RAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDSWGRT 82
Query: 149 PLHLTGKYGHIKVAKLLLQKDAPVDFQ---GKAPVDDVTVD 186
PLHL GH+++ ++LL+ A V+ Q GK D+++D
Sbjct: 83 PLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAF-DISID 122
>pdb|4GRG|A Chain A, Crystal Structure Of Ige Complexed With E2_79, An Anti-Ige
Inhibitor
pdb|4GRG|B Chain B, Crystal Structure Of Ige Complexed With E2_79, An Anti-Ige
Inhibitor
Length = 135
Score = 76.6 bits (187), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 70/133 (52%), Gaps = 13/133 (9%)
Query: 1022 DLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAP 1081
DL L AA+ GQ++ +L NGA + + G TPLHL GH+++ ++LL+ A
Sbjct: 13 DLGKKLLEAARAGQDDEVRILTANGADVNANDYWGHTPLHLAAMLGHLEIVEVLLKNGAD 72
Query: 1082 VDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHL 1141
V+ G G TPLH+A+ DH ++I LL++GA NA+ G T +
Sbjct: 73 VNATGNTGRTPLHLAAWADH-------------LEIVEVLLKHGADVNAQDKFGKTAFDI 119
Query: 1142 SASEGHADMSAML 1154
S G+ D++ +L
Sbjct: 120 SIDNGNEDLAEIL 132
Score = 73.2 bits (178), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 55/96 (57%)
Query: 1125 GAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVA 1184
GA NA G TPLHL+A GH ++ +LL++GADV+ G TPLHL A D + +
Sbjct: 37 GADVNANDYWGHTPLHLAAMLGHLEIVEVLLKNGADVNATGNTGRTPLHLAAWADHLEIV 96
Query: 1185 ELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLL 1220
E+LLK+ A V+ K G T I+ G +A +L
Sbjct: 97 EVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEIL 132
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 59/114 (51%)
Query: 194 AAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVR 253
AA G + L AD NA G TPLH+A +++VE+LLK+GA + AT
Sbjct: 21 AARAGQDDEVRILTANGADVNANDYWGHTPLHLAAMLGHLEIVEVLLKNGADVNATGNTG 80
Query: 254 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 307
LH+A + +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAAWADHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 65/112 (58%)
Query: 997 ASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKG 1056
A+R G D V +L +GA V++ +T LH+AA G E+ VLL+NGA + +T G
Sbjct: 21 AARAGQDDEVRILTANGADVNANDYWGHTPLHLAAMLGHLEIVEVLLKNGADVNATGNTG 80
Query: 1057 FTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLL 1108
TPLHL H+++ ++LL+ A V+ Q K G T ++ ++++A +L
Sbjct: 81 RTPLHLAAWADHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEIL 132
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%)
Query: 227 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 286
A + + V +L +GA + A LH+A +++VE+LLK+GA + AT
Sbjct: 21 AARAGQDDEVRILTANGADVNANDYWGHTPLHLAAMLGHLEIVEVLLKNGADVNATGNTG 80
Query: 287 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 340
LH+A + +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAAWADHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%)
Query: 260 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 319
A + + V +L +GA + A LH+A +++VE+LLK+GA + AT
Sbjct: 21 AARAGQDDEVRILTANGADVNANDYWGHTPLHLAAMLGHLEIVEVLLKNGADVNATGNTG 80
Query: 320 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 373
LH+A + +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAAWADHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%)
Query: 293 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 352
A + + V +L +GA + A LH+A +++VE+LLK+GA + AT
Sbjct: 21 AARAGQDDEVRILTANGADVNANDYWGHTPLHLAAMLGHLEIVEVLLKNGADVNATGNTG 80
Query: 353 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 406
LH+A + +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAAWADHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%)
Query: 326 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 385
A + + V +L +GA + A LH+A +++VE+LLK+GA + AT
Sbjct: 21 AARAGQDDEVRILTANGADVNANDYWGHTPLHLAAMLGHLEIVEVLLKNGADVNATGNTG 80
Query: 386 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 439
LH+A + +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAAWADHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%)
Query: 359 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 418
A + + V +L +GA + A LH+A +++VE+LLK+GA + AT
Sbjct: 21 AARAGQDDEVRILTANGADVNANDYWGHTPLHLAAMLGHLEIVEVLLKNGADVNATGNTG 80
Query: 419 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 472
LH+A + +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAAWADHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%)
Query: 392 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 451
A + + V +L +GA + A LH+A +++VE+LLK+GA + AT
Sbjct: 21 AARAGQDDEVRILTANGADVNANDYWGHTPLHLAAMLGHLEIVEVLLKNGADVNATGNTG 80
Query: 452 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 505
LH+A + +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAAWADHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%)
Query: 425 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 484
A + + V +L +GA + A LH+A +++VE+LLK+GA + AT
Sbjct: 21 AARAGQDDEVRILTANGADVNANDYWGHTPLHLAAMLGHLEIVEVLLKNGADVNATGNTG 80
Query: 485 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 538
LH+A + +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAAWADHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%)
Query: 458 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 517
A + + V +L +GA + A LH+A +++VE+LLK+GA + AT
Sbjct: 21 AARAGQDDEVRILTANGADVNANDYWGHTPLHLAAMLGHLEIVEVLLKNGADVNATGNTG 80
Query: 518 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 571
LH+A + +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAAWADHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%)
Query: 491 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 550
A + + V +L +GA + A LH+A +++VE+LLK+GA + AT
Sbjct: 21 AARAGQDDEVRILTANGADVNANDYWGHTPLHLAAMLGHLEIVEVLLKNGADVNATGNTG 80
Query: 551 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 604
LH+A + +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAAWADHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%)
Query: 524 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 583
A + + V +L +GA + A LH+A +++VE+LLK+GA + AT
Sbjct: 21 AARAGQDDEVRILTANGADVNANDYWGHTPLHLAAMLGHLEIVEVLLKNGADVNATGNTG 80
Query: 584 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 637
LH+A + +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAAWADHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%)
Query: 557 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 616
A + + V +L +GA + A LH+A +++VE+LLK+GA + AT
Sbjct: 21 AARAGQDDEVRILTANGADVNANDYWGHTPLHLAAMLGHLEIVEVLLKNGADVNATGNTG 80
Query: 617 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 670
LH+A + +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAAWADHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%)
Query: 590 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 649
A + + V +L +GA + A LH+A +++VE+LLK+GA + AT
Sbjct: 21 AARAGQDDEVRILTANGADVNANDYWGHTPLHLAAMLGHLEIVEVLLKNGADVNATGNTG 80
Query: 650 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 703
LH+A + +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAAWADHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%)
Query: 623 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 682
A + + V +L +GA + A LH+A +++VE+LLK+GA + AT
Sbjct: 21 AARAGQDDEVRILTANGADVNANDYWGHTPLHLAAMLGHLEIVEVLLKNGADVNATGNTG 80
Query: 683 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 736
LH+A + +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAAWADHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%)
Query: 656 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 715
A + + V +L +GA + A LH+A +++VE+LLK+GA + AT
Sbjct: 21 AARAGQDDEVRILTANGADVNANDYWGHTPLHLAAMLGHLEIVEVLLKNGADVNATGNTG 80
Query: 716 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 769
LH+A + +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAAWADHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%)
Query: 689 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 748
A + + V +L +GA + A LH+A +++VE+LLK+GA + AT
Sbjct: 21 AARAGQDDEVRILTANGADVNANDYWGHTPLHLAAMLGHLEIVEVLLKNGADVNATGNTG 80
Query: 749 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 802
LH+A + +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAAWADHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%)
Query: 722 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 781
A + + V +L +GA + A LH+A +++VE+LLK+GA + AT
Sbjct: 21 AARAGQDDEVRILTANGADVNANDYWGHTPLHLAAMLGHLEIVEVLLKNGADVNATGNTG 80
Query: 782 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 835
LH+A + +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAAWADHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%)
Query: 755 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 814
A + + V +L +GA + A LH+A +++VE+LLK+GA + AT
Sbjct: 21 AARAGQDDEVRILTANGADVNANDYWGHTPLHLAAMLGHLEIVEVLLKNGADVNATGNTG 80
Query: 815 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 868
LH+A + +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAAWADHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%)
Query: 788 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 847
A + + V +L +GA + A LH+A +++VE+LLK+GA + AT
Sbjct: 21 AARAGQDDEVRILTANGADVNANDYWGHTPLHLAAMLGHLEIVEVLLKNGADVNATGNTG 80
Query: 848 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 901
LH+A + +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAAWADHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%)
Query: 821 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 880
A + + V +L +GA + A LH+A +++VE+LLK+GA + AT
Sbjct: 21 AARAGQDDEVRILTANGADVNANDYWGHTPLHLAAMLGHLEIVEVLLKNGADVNATGNTG 80
Query: 881 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 934
LH+A + +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAAWADHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
Query: 186 DYL--TALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHG 243
DY T LH+AA GH + + LL AD NA G TPLH+A + +++VE+LLKHG
Sbjct: 44 DYWGHTPLHLAAMLGHLEIVEVLLKNGADVNATGNTGRTPLHLAAWADHLEIVEVLLKHG 103
Query: 244 ASIEATTEVREPMLHIACKKNRIKVVELLLK 274
A + A + + I+ + E+L K
Sbjct: 104 ADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 1297 SAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQ 1356
+A+ G V +L GA NA N G TPLH+A G + + +LL A+V+ T +
Sbjct: 21 AARAGQDDEVRILTANGADVNA-NDYWGHTPLHLAAMLGHLEIVEVLLKNGADVNATGNT 79
Query: 1357 GFTPLHHSAQQGHSTIVALLLDRGASPNATNK 1388
G TPLH +A H IV +LL GA NA +K
Sbjct: 80 GRTPLHLAAWADHLEIVEVLLKHGADVNAQDK 111
Score = 60.8 bits (146), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 58/113 (51%)
Query: 854 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 913
A + + V +L +GA + A LH+A +++VE+LLK+GA + AT
Sbjct: 21 AARAGQDDEVRILTANGADVNANDYWGHTPLHLAAMLGHLEIVEVLLKNGADVNATGNTG 80
Query: 914 EPMLHIACKKNRIKVVELLLKHGASSHVVSCYSNVKVHVSLNKIQDVSSSILR 966
LH+A + +++VE+LLKHGA + + +S++ + + IL+
Sbjct: 81 RTPLHLAAWADHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQ 133
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 56/113 (49%), Gaps = 2/113 (1%)
Query: 1265 SAQQGHSTIVALLLDRGASPNATN-KGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTR 1323
+A+ G V +L GA NA + G TPLH +A GH IV +LL GA NAT T
Sbjct: 21 AARAGQDDEVRILTANGADVNANDYWGHTPLHLAAMLGHLEIVEVLLKNGADVNATGNT- 79
Query: 1324 GFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALL 1376
G TPLH+A + + +LL A+V+ G T S G+ + +L
Sbjct: 80 GRTPLHLAAWADHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEIL 132
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 1253 NTTD-QGFTPLHHSAQQGHSTIVALLLDRGASPNAT-NKGFTPLHHSAQQGHSTIVALLL 1310
N D G TPLH +A GH IV +LL GA NAT N G TPLH +A H IV +LL
Sbjct: 41 NANDYWGHTPLHLAAMLGHLEIVEVLLKNGADVNATGNTGRTPLHLAAWADHLEIVEVLL 100
Query: 1311 DRGASPNATNKTRGFTPLHIACHYGQISMARLL 1343
GA NA +K G T I+ G +A +L
Sbjct: 101 KHGADVNAQDKF-GKTAFDISIDNGNEDLAEIL 132
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 46/92 (50%)
Query: 1142 SASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKG 1201
+A G D +L +GADV+ G TPLHL A + + E+LLKN A V+ G
Sbjct: 21 AARAGQDDEVRILTANGADVNANDYWGHTPLHLAAMLGHLEIVEVLLKNGADVNATGNTG 80
Query: 1202 FTPLHIACHYGQISMARLLLDQSANVTVPKNF 1233
TPLH+A + + +LL A+V F
Sbjct: 81 RTPLHLAAWADHLEIVEVLLKHGADVNAQDKF 112
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 54/84 (64%)
Query: 992 TPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTS 1051
TPLH+A+ LG+++IV +LL++GA V++T T LH+AA E+ VLL++GA + +
Sbjct: 49 TPLHLAAMLGHLEIVEVLLKNGADVNATGNTGRTPLHLAAWADHLEIVEVLLKHGADVNA 108
Query: 1052 TTKKGFTPLHLTGKYGHIKVAKLL 1075
K G T ++ G+ +A++L
Sbjct: 109 QDKFGKTAFDISIDNGNEDLAEIL 132
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 58/125 (46%), Gaps = 13/125 (10%)
Query: 1065 KYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEY 1124
+ G ++L A V+ G TPLH+A+ H ++I LL+
Sbjct: 23 RAGQDDEVRILTANGADVNANDYWGHTPLHLAAMLGH-------------LEIVEVLLKN 69
Query: 1125 GAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVA 1184
GA NA G TPLHL+A H ++ +LL+HGADV+ K G T + +A
Sbjct: 70 GADVNATGNTGRTPLHLAAWADHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLA 129
Query: 1185 ELLLK 1189
E+L K
Sbjct: 130 EILQK 134
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 54/95 (56%), Gaps = 8/95 (8%)
Query: 24 NPFGSHFQHNITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIE 83
N + H TPLH+AA G +V +LL GA+++ G T LH AA + H ++E
Sbjct: 43 NDYWGH-----TPLHLAAMLGHLEIVEVLLKNGADVNATGNTGRTPLHLAAWADHLEIVE 97
Query: 84 MLLEQGAPISSKTKV--RGFYI-LRSGHEAVIEML 115
+LL+ GA ++++ K F I + +G+E + E+L
Sbjct: 98 VLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEIL 132
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 65/156 (41%), Gaps = 44/156 (28%)
Query: 887 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASSHVVSCYS 946
A + + V +L +GA + A LH+A +++VE+LLK+GA V+
Sbjct: 21 AARAGQDDEVRILTANGADVNANDYWGHTPLHLAAMLGHLEIVEVLLKNGAD---VNATG 77
Query: 947 NVKVHVSLNKIQDVSSSILRLATCDVLPQCETRLNFSNLRVREQQTPLHIASRLGNVDIV 1006
N +TPLH+A+ +++IV
Sbjct: 78 NTG-----------------------------------------RTPLHLAAWADHLEIV 96
Query: 1007 MLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVL 1042
+LL+HGA V++ K TA I+ G E++A +L
Sbjct: 97 EVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEIL 132
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 40 AAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISSKTKVR 99
AA+ G+ + V +L + GA+++ G T LH AA GH ++E+LL+ GA +++ T
Sbjct: 21 AARAGQDDEVRILTANGADVNANDYWGHTPLHLAAMLGHLEIVEVLLKNGADVNA-TGNT 79
Query: 100 GFYIL----RSGHEAVIEMLLEQGAPISSKTKVA 129
G L + H ++E+LL+ GA ++++ K
Sbjct: 80 GRTPLHLAAWADHLEIVEVLLKHGADVNAQDKFG 113
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 59/117 (50%), Gaps = 18/117 (15%)
Query: 73 AARSGHEAVIEMLLEQGAPISSKTKVRGFYILRSGHEAVIEMLLEQGAPISSKTKVAAVL 132
AAR+G + + +L GA +++ ++ GH + A + ++ VL
Sbjct: 21 AARAGQDDEVRILTANGADVNAND----YW----GHTPL------HLAAMLGHLEIVEVL 66
Query: 133 LENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQ---GKAPVDDVTVD 186
L+NGA + +T G TPLHL H+++ ++LL+ A V+ Q GK D+++D
Sbjct: 67 LKNGADVNATGNTGRTPLHLAAWADHLEIVEVLLKHGADVNAQDKFGKTAF-DISID 122
>pdb|3ZUV|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|D Chain D, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 136
Score = 76.6 bits (187), Expect = 1e-13, Method: Composition-based stats.
Identities = 43/133 (32%), Positives = 73/133 (54%), Gaps = 13/133 (9%)
Query: 1022 DLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAP 1081
DL L AA+ GQ++ +L+ NGA + + + G TPLHL + GH+++ ++LL+ A
Sbjct: 13 DLGKKLLEAARAGQDDEVRILMANGADVNALDEDGLTPLHLAAQLGHLEIVEVLLKYGAD 72
Query: 1082 VDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHL 1141
V+ + G+TPLH+A+ H ++I LL++GA NA+ G T +
Sbjct: 73 VNAEDNFGITPLHLAAIRGH-------------LEIVEVLLKHGADVNAQDKFGKTAFDI 119
Query: 1142 SASEGHADMSAML 1154
S G+ D++ +L
Sbjct: 120 SIDNGNEDLAEIL 132
Score = 71.6 bits (174), Expect = 3e-12, Method: Composition-based stats.
Identities = 44/128 (34%), Positives = 66/128 (51%), Gaps = 13/128 (10%)
Query: 1064 GKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLE 1123
+ G ++L+ A V+ ++G+TPLH+A+ H ++I LL+
Sbjct: 22 ARAGQDDEVRILMANGADVNALDEDGLTPLHLAAQLGH-------------LEIVEVLLK 68
Query: 1124 YGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGV 1183
YGA NAE G TPLHL+A GH ++ +LL+HGADV+ K G T + +
Sbjct: 69 YGADVNAEDNFGITPLHLAAIRGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDL 128
Query: 1184 AELLLKNN 1191
AE+L K N
Sbjct: 129 AEILQKLN 136
Score = 71.2 bits (173), Expect = 4e-12, Method: Composition-based stats.
Identities = 40/112 (35%), Positives = 67/112 (59%)
Query: 997 ASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKG 1056
A+R G D V +L+ +GA V++ +D T LH+AA+ G E+ VLL+ GA + + G
Sbjct: 21 AARAGQDDEVRILMANGADVNALDEDGLTPLHLAAQLGHLEIVEVLLKYGADVNAEDNFG 80
Query: 1057 FTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLL 1108
TPLHL GH+++ ++LL+ A V+ Q K G T ++ ++++A +L
Sbjct: 81 ITPLHLAAIRGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEIL 132
Score = 70.5 bits (171), Expect = 6e-12, Method: Composition-based stats.
Identities = 43/115 (37%), Positives = 61/115 (53%)
Query: 1106 LLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAA 1165
LL + D L+ GA NA G TPLHL+A GH ++ +LL++GADV+
Sbjct: 18 LLEAARAGQDDEVRILMANGADVNALDEDGLTPLHLAAQLGHLEIVEVLLKYGADVNAED 77
Query: 1166 KNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLL 1220
G+TPLHL A + + E+LLK+ A V+ K G T I+ G +A +L
Sbjct: 78 NFGITPLHLAAIRGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEIL 132
Score = 67.8 bits (164), Expect = 4e-11, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 61/114 (53%)
Query: 194 AAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVR 253
AA G + L+ AD NA +G TPLH+A + +++VE+LLK+GA + A
Sbjct: 21 AARAGQDDEVRILMANGADVNALDEDGLTPLHLAAQLGHLEIVEVLLKYGADVNAEDNFG 80
Query: 254 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 307
LH+A + +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 81 ITPLHLAAIRGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 65.1 bits (157), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/92 (38%), Positives = 51/92 (55%)
Query: 1142 SASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKG 1201
+A G D +L+ +GADV+ ++GLTPLHL AQ + + E+LLK A V+ G
Sbjct: 21 AARAGQDDEVRILMANGADVNALDEDGLTPLHLAAQLGHLEIVEVLLKYGADVNAEDNFG 80
Query: 1202 FTPLHIACHYGQISMARLLLDQSANVTVPKNF 1233
TPLH+A G + + +LL A+V F
Sbjct: 81 ITPLHLAAIRGHLEIVEVLLKHGADVNAQDKF 112
Score = 64.3 bits (155), Expect = 4e-10, Method: Composition-based stats.
Identities = 37/95 (38%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Query: 1294 LHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCT 1353
L +A+ G V +L+ GA NA ++ G TPLH+A G + + +LL A+V+
Sbjct: 18 LLEAARAGQDDEVRILMANGADVNALDED-GLTPLHLAAQLGHLEIVEVLLKYGADVNAE 76
Query: 1354 TDQGFTPLHHSAQQGHSTIVALLLDRGASPNATNK 1388
+ G TPLH +A +GH IV +LL GA NA +K
Sbjct: 77 DNFGITPLHLAAIRGHLEIVEVLLKHGADVNAQDK 111
Score = 63.9 bits (154), Expect = 6e-10, Method: Composition-based stats.
Identities = 36/97 (37%), Positives = 53/97 (54%)
Query: 178 APVDDVTVDYLTALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVE 237
A V+ + D LT LH+AA GH + + LL AD NA G TPLH+A + +++VE
Sbjct: 38 ADVNALDEDGLTPLHLAAQLGHLEIVEVLLKYGADVNAEDNFGITPLHLAAIRGHLEIVE 97
Query: 238 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 274
+LLKHGA + A + + I+ + E+L K
Sbjct: 98 VLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 63.5 bits (153), Expect = 7e-10, Method: Composition-based stats.
Identities = 41/89 (46%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 1256 DQGFTPLHHSAQQGHSTIVALLLDRGASPNAT-NKGFTPLHHSAQQGHSTIVALLLDRGA 1314
+ G TPLH +AQ GH IV +LL GA NA N G TPLH +A +GH IV +LL GA
Sbjct: 45 EDGLTPLHLAAQLGHLEIVEVLLKYGADVNAEDNFGITPLHLAAIRGHLEIVEVLLKHGA 104
Query: 1315 SPNATNKTRGFTPLHIACHYGQISMARLL 1343
NA +K G T I+ G +A +L
Sbjct: 105 DVNAQDKF-GKTAFDISIDNGNEDLAEIL 132
Score = 63.2 bits (152), Expect = 9e-10, Method: Composition-based stats.
Identities = 42/116 (36%), Positives = 60/116 (51%), Gaps = 2/116 (1%)
Query: 1262 LHHSAQQGHSTIVALLLDRGASPNATNK-GFTPLHHSAQQGHSTIVALLLDRGASPNATN 1320
L +A+ G V +L+ GA NA ++ G TPLH +AQ GH IV +LL GA NA +
Sbjct: 18 LLEAARAGQDDEVRILMANGADVNALDEDGLTPLHLAAQLGHLEIVEVLLKYGADVNAED 77
Query: 1321 KTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALL 1376
G TPLH+A G + + +LL A+V+ G T S G+ + +L
Sbjct: 78 NF-GITPLHLAAIRGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEIL 132
Score = 58.5 bits (140), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 55/84 (65%)
Query: 992 TPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTS 1051
TPLH+A++LG+++IV +LL++GA V++ T LH+AA G E+ VLL++GA + +
Sbjct: 49 TPLHLAAQLGHLEIVEVLLKYGADVNAEDNFGITPLHLAAIRGHLEIVEVLLKHGADVNA 108
Query: 1052 TTKKGFTPLHLTGKYGHIKVAKLL 1075
K G T ++ G+ +A++L
Sbjct: 109 QDKFGKTAFDISIDNGNEDLAEIL 132
Score = 58.5 bits (140), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/105 (31%), Positives = 57/105 (54%)
Query: 236 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 295
V +L+ +GA + A E LH+A + +++VE+LLK+GA + A LH+A
Sbjct: 30 VRILMANGADVNALDEDGLTPLHLAAQLGHLEIVEVLLKYGADVNAEDNFGITPLHLAAI 89
Query: 296 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 340
+ +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 90 RGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 58.5 bits (140), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/105 (31%), Positives = 57/105 (54%)
Query: 269 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 328
V +L+ +GA + A E LH+A + +++VE+LLK+GA + A LH+A
Sbjct: 30 VRILMANGADVNALDEDGLTPLHLAAQLGHLEIVEVLLKYGADVNAEDNFGITPLHLAAI 89
Query: 329 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 373
+ +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 90 RGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 58.5 bits (140), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/105 (31%), Positives = 57/105 (54%)
Query: 302 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 361
V +L+ +GA + A E LH+A + +++VE+LLK+GA + A LH+A
Sbjct: 30 VRILMANGADVNALDEDGLTPLHLAAQLGHLEIVEVLLKYGADVNAEDNFGITPLHLAAI 89
Query: 362 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 406
+ +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 90 RGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 58.5 bits (140), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/105 (31%), Positives = 57/105 (54%)
Query: 335 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 394
V +L+ +GA + A E LH+A + +++VE+LLK+GA + A LH+A
Sbjct: 30 VRILMANGADVNALDEDGLTPLHLAAQLGHLEIVEVLLKYGADVNAEDNFGITPLHLAAI 89
Query: 395 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 439
+ +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 90 RGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 58.5 bits (140), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/105 (31%), Positives = 57/105 (54%)
Query: 368 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 427
V +L+ +GA + A E LH+A + +++VE+LLK+GA + A LH+A
Sbjct: 30 VRILMANGADVNALDEDGLTPLHLAAQLGHLEIVEVLLKYGADVNAEDNFGITPLHLAAI 89
Query: 428 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 472
+ +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 90 RGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 58.5 bits (140), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/105 (31%), Positives = 57/105 (54%)
Query: 401 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 460
V +L+ +GA + A E LH+A + +++VE+LLK+GA + A LH+A
Sbjct: 30 VRILMANGADVNALDEDGLTPLHLAAQLGHLEIVEVLLKYGADVNAEDNFGITPLHLAAI 89
Query: 461 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 505
+ +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 90 RGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 58.5 bits (140), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/105 (31%), Positives = 57/105 (54%)
Query: 434 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 493
V +L+ +GA + A E LH+A + +++VE+LLK+GA + A LH+A
Sbjct: 30 VRILMANGADVNALDEDGLTPLHLAAQLGHLEIVEVLLKYGADVNAEDNFGITPLHLAAI 89
Query: 494 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 538
+ +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 90 RGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 58.5 bits (140), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/105 (31%), Positives = 57/105 (54%)
Query: 467 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 526
V +L+ +GA + A E LH+A + +++VE+LLK+GA + A LH+A
Sbjct: 30 VRILMANGADVNALDEDGLTPLHLAAQLGHLEIVEVLLKYGADVNAEDNFGITPLHLAAI 89
Query: 527 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 571
+ +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 90 RGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 58.5 bits (140), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/105 (31%), Positives = 57/105 (54%)
Query: 500 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 559
V +L+ +GA + A E LH+A + +++VE+LLK+GA + A LH+A
Sbjct: 30 VRILMANGADVNALDEDGLTPLHLAAQLGHLEIVEVLLKYGADVNAEDNFGITPLHLAAI 89
Query: 560 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 604
+ +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 90 RGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 58.5 bits (140), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/105 (31%), Positives = 57/105 (54%)
Query: 533 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 592
V +L+ +GA + A E LH+A + +++VE+LLK+GA + A LH+A
Sbjct: 30 VRILMANGADVNALDEDGLTPLHLAAQLGHLEIVEVLLKYGADVNAEDNFGITPLHLAAI 89
Query: 593 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 637
+ +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 90 RGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 58.5 bits (140), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/105 (31%), Positives = 57/105 (54%)
Query: 566 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 625
V +L+ +GA + A E LH+A + +++VE+LLK+GA + A LH+A
Sbjct: 30 VRILMANGADVNALDEDGLTPLHLAAQLGHLEIVEVLLKYGADVNAEDNFGITPLHLAAI 89
Query: 626 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 670
+ +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 90 RGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 58.5 bits (140), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/105 (31%), Positives = 57/105 (54%)
Query: 599 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 658
V +L+ +GA + A E LH+A + +++VE+LLK+GA + A LH+A
Sbjct: 30 VRILMANGADVNALDEDGLTPLHLAAQLGHLEIVEVLLKYGADVNAEDNFGITPLHLAAI 89
Query: 659 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 703
+ +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 90 RGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 58.5 bits (140), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/105 (31%), Positives = 57/105 (54%)
Query: 632 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 691
V +L+ +GA + A E LH+A + +++VE+LLK+GA + A LH+A
Sbjct: 30 VRILMANGADVNALDEDGLTPLHLAAQLGHLEIVEVLLKYGADVNAEDNFGITPLHLAAI 89
Query: 692 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 736
+ +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 90 RGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 58.5 bits (140), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/105 (31%), Positives = 57/105 (54%)
Query: 665 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 724
V +L+ +GA + A E LH+A + +++VE+LLK+GA + A LH+A
Sbjct: 30 VRILMANGADVNALDEDGLTPLHLAAQLGHLEIVEVLLKYGADVNAEDNFGITPLHLAAI 89
Query: 725 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 769
+ +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 90 RGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 58.5 bits (140), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/105 (31%), Positives = 57/105 (54%)
Query: 698 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 757
V +L+ +GA + A E LH+A + +++VE+LLK+GA + A LH+A
Sbjct: 30 VRILMANGADVNALDEDGLTPLHLAAQLGHLEIVEVLLKYGADVNAEDNFGITPLHLAAI 89
Query: 758 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 802
+ +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 90 RGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 58.5 bits (140), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/105 (31%), Positives = 57/105 (54%)
Query: 731 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 790
V +L+ +GA + A E LH+A + +++VE+LLK+GA + A LH+A
Sbjct: 30 VRILMANGADVNALDEDGLTPLHLAAQLGHLEIVEVLLKYGADVNAEDNFGITPLHLAAI 89
Query: 791 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 835
+ +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 90 RGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 58.5 bits (140), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/105 (31%), Positives = 57/105 (54%)
Query: 764 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 823
V +L+ +GA + A E LH+A + +++VE+LLK+GA + A LH+A
Sbjct: 30 VRILMANGADVNALDEDGLTPLHLAAQLGHLEIVEVLLKYGADVNAEDNFGITPLHLAAI 89
Query: 824 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 868
+ +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 90 RGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 58.5 bits (140), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/105 (31%), Positives = 57/105 (54%)
Query: 797 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 856
V +L+ +GA + A E LH+A + +++VE+LLK+GA + A LH+A
Sbjct: 30 VRILMANGADVNALDEDGLTPLHLAAQLGHLEIVEVLLKYGADVNAEDNFGITPLHLAAI 89
Query: 857 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 901
+ +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 90 RGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 58.5 bits (140), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/105 (31%), Positives = 57/105 (54%)
Query: 830 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 889
V +L+ +GA + A E LH+A + +++VE+LLK+GA + A LH+A
Sbjct: 30 VRILMANGADVNALDEDGLTPLHLAAQLGHLEIVEVLLKYGADVNAEDNFGITPLHLAAI 89
Query: 890 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 934
+ +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 90 RGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 57.4 bits (137), Expect = 6e-08, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 8/111 (7%)
Query: 131 VLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKAPVDDVTVDYLTA 190
+L+ NGA + + + G TPLHL + GH+++ ++LL+ A V+ + + T
Sbjct: 32 ILMANGADVNALDEDGLTPLHLAAQLGHLEIVEVLLKYGADVNAEDNFGI--------TP 83
Query: 191 LHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLK 241
LH+AA GH + + LL AD NA+ G T I+ + E+L K
Sbjct: 84 LHLAAIRGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 57.0 bits (136), Expect = 8e-08, Method: Composition-based stats.
Identities = 32/92 (34%), Positives = 58/92 (63%), Gaps = 5/92 (5%)
Query: 40 AAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISSKTKVR 99
AA+ G+ + V +L++ GA+++ DGLT LH AA+ GH ++E+LL+ GA ++++
Sbjct: 21 AARAGQDDEVRILMANGADVNALDEDGLTPLHLAAQLGHLEIVEVLLKYGADVNAEDNF- 79
Query: 100 GFYILR----SGHEAVIEMLLEQGAPISSKTK 127
G L GH ++E+LL+ GA ++++ K
Sbjct: 80 GITPLHLAAIRGHLEIVEVLLKHGADVNAQDK 111
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/88 (36%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Query: 31 QHNITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGA 90
+ +TPLH+AA+ G +V +LL GA+++ + G+T LH AA GH ++E+LL+ GA
Sbjct: 45 EDGLTPLHLAAQLGHLEIVEVLLKYGADVNAEDNFGITPLHLAAIRGHLEIVEVLLKHGA 104
Query: 91 PISSKTKV--RGFYI-LRSGHEAVIEML 115
++++ K F I + +G+E + E+L
Sbjct: 105 DVNAQDKFGKTAFDISIDNGNEDLAEIL 132
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 57/104 (54%)
Query: 863 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 922
V +L+ +GA + A E LH+A + +++VE+LLK+GA + A LH+A
Sbjct: 30 VRILMANGADVNALDEDGLTPLHLAAQLGHLEIVEVLLKYGADVNAEDNFGITPLHLAAI 89
Query: 923 KNRIKVVELLLKHGASSHVVSCYSNVKVHVSLNKIQDVSSSILR 966
+ +++VE+LLKHGA + + +S++ + + IL+
Sbjct: 90 RGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQ 133
>pdb|3C5R|A Chain A, Crystal Structure Of The Bard1 Ankyrin Repeat Domain And Its
Functional Consequences
pdb|3C5R|B Chain B, Crystal Structure Of The Bard1 Ankyrin Repeat Domain And Its
Functional Consequences
Length = 137
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 61/107 (57%), Gaps = 1/107 (0%)
Query: 1281 GASPNATNKGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMA 1340
G P ++G T LH ++ +G V LL G+ PN + G+TPLH AC++G + +
Sbjct: 1 GIDPFTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHA-GWTPLHEACNHGHLKVV 59
Query: 1341 RLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATN 1387
LLL A V+ T Q +PLH +A+ GH IV LLL GAS NA N
Sbjct: 60 ELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVN 106
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 53/93 (56%)
Query: 189 TALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEA 248
T LH+A+ G + LL +DPN + G+TPLH AC +KVVELLL+H A +
Sbjct: 12 TLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNT 71
Query: 249 TTEVREPMLHIACKKNRIKVVELLLKHGASIEA 281
T + LH A K + +V+LLL +GAS A
Sbjct: 72 TGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNA 104
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
Query: 839 SIEATTEVR-EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVE 897
I+ T R E +LHIA K I VE LL++G+ LH AC +KVVE
Sbjct: 1 GIDPFTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVE 60
Query: 898 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASSHVVSCYS 946
LLL+H A + T + LH A K + +V+LLL +GAS + V+ +
Sbjct: 61 LLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFG 109
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 64/131 (48%), Gaps = 16/131 (12%)
Query: 1025 TALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDF 1084
T LHIA+ +G LL+NG+ G+TPLH +GH+KV +LLLQ A V+
Sbjct: 12 TLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNT 71
Query: 1085 QGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSAS 1144
G +PLH A+ K +DI LL YGA NA ++ G P+ +
Sbjct: 72 TGYQNDSPLHDAA-------------KNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDD 118
Query: 1145 EGHADMSAMLL 1155
E M ++LL
Sbjct: 119 ES---MKSLLL 126
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 245 SIEATTEVR-EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVE 303
I+ T R E +LHIA K I VE LL++G+ LH AC +KVVE
Sbjct: 1 GIDPFTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVE 60
Query: 304 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEA 347
LLL+H A + T + LH A K + +V+LLL +GAS A
Sbjct: 61 LLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNA 104
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 278 SIEATTEVR-EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVE 336
I+ T R E +LHIA K I VE LL++G+ LH AC +KVVE
Sbjct: 1 GIDPFTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVE 60
Query: 337 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEA 380
LLL+H A + T + LH A K + +V+LLL +GAS A
Sbjct: 61 LLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNA 104
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 311 SIEATTEVR-EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVE 369
I+ T R E +LHIA K I VE LL++G+ LH AC +KVVE
Sbjct: 1 GIDPFTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVE 60
Query: 370 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEA 413
LLL+H A + T + LH A K + +V+LLL +GAS A
Sbjct: 61 LLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNA 104
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 344 SIEATTEVR-EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVE 402
I+ T R E +LHIA K I VE LL++G+ LH AC +KVVE
Sbjct: 1 GIDPFTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVE 60
Query: 403 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEA 446
LLL+H A + T + LH A K + +V+LLL +GAS A
Sbjct: 61 LLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNA 104
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 377 SIEATTEVR-EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVE 435
I+ T R E +LHIA K I VE LL++G+ LH AC +KVVE
Sbjct: 1 GIDPFTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVE 60
Query: 436 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEA 479
LLL+H A + T + LH A K + +V+LLL +GAS A
Sbjct: 61 LLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNA 104
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 410 SIEATTEVR-EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVE 468
I+ T R E +LHIA K I VE LL++G+ LH AC +KVVE
Sbjct: 1 GIDPFTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVE 60
Query: 469 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEA 512
LLL+H A + T + LH A K + +V+LLL +GAS A
Sbjct: 61 LLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNA 104
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 443 SIEATTEVR-EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVE 501
I+ T R E +LHIA K I VE LL++G+ LH AC +KVVE
Sbjct: 1 GIDPFTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVE 60
Query: 502 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEA 545
LLL+H A + T + LH A K + +V+LLL +GAS A
Sbjct: 61 LLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNA 104
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 476 SIEATTEVR-EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVE 534
I+ T R E +LHIA K I VE LL++G+ LH AC +KVVE
Sbjct: 1 GIDPFTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVE 60
Query: 535 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEA 578
LLL+H A + T + LH A K + +V+LLL +GAS A
Sbjct: 61 LLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNA 104
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 509 SIEATTEVR-EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVE 567
I+ T R E +LHIA K I VE LL++G+ LH AC +KVVE
Sbjct: 1 GIDPFTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVE 60
Query: 568 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEA 611
LLL+H A + T + LH A K + +V+LLL +GAS A
Sbjct: 61 LLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNA 104
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 542 SIEATTEVR-EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVE 600
I+ T R E +LHIA K I VE LL++G+ LH AC +KVVE
Sbjct: 1 GIDPFTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVE 60
Query: 601 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEA 644
LLL+H A + T + LH A K + +V+LLL +GAS A
Sbjct: 61 LLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNA 104
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 575 SIEATTEVR-EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVE 633
I+ T R E +LHIA K I VE LL++G+ LH AC +KVVE
Sbjct: 1 GIDPFTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVE 60
Query: 634 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEA 677
LLL+H A + T + LH A K + +V+LLL +GAS A
Sbjct: 61 LLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNA 104
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 608 SIEATTEVR-EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVE 666
I+ T R E +LHIA K I VE LL++G+ LH AC +KVVE
Sbjct: 1 GIDPFTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVE 60
Query: 667 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEA 710
LLL+H A + T + LH A K + +V+LLL +GAS A
Sbjct: 61 LLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNA 104
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 641 SIEATTEVR-EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVE 699
I+ T R E +LHIA K I VE LL++G+ LH AC +KVVE
Sbjct: 1 GIDPFTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVE 60
Query: 700 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEA 743
LLL+H A + T + LH A K + +V+LLL +GAS A
Sbjct: 61 LLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNA 104
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 674 SIEATTEVR-EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVE 732
I+ T R E +LHIA K I VE LL++G+ LH AC +KVVE
Sbjct: 1 GIDPFTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVE 60
Query: 733 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEA 776
LLL+H A + T + LH A K + +V+LLL +GAS A
Sbjct: 61 LLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNA 104
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 707 SIEATTEVR-EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVE 765
I+ T R E +LHIA K I VE LL++G+ LH AC +KVVE
Sbjct: 1 GIDPFTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVE 60
Query: 766 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEA 809
LLL+H A + T + LH A K + +V+LLL +GAS A
Sbjct: 61 LLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNA 104
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 740 SIEATTEVR-EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVE 798
I+ T R E +LHIA K I VE LL++G+ LH AC +KVVE
Sbjct: 1 GIDPFTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVE 60
Query: 799 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEA 842
LLL+H A + T + LH A K + +V+LLL +GAS A
Sbjct: 61 LLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNA 104
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 773 SIEATTEVR-EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVE 831
I+ T R E +LHIA K I VE LL++G+ LH AC +KVVE
Sbjct: 1 GIDPFTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVE 60
Query: 832 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEA 875
LLL+H A + T + LH A K + +V+LLL +GAS A
Sbjct: 61 LLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNA 104
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 806 SIEATTEVR-EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVE 864
I+ T R E +LHIA K I VE LL++G+ LH AC +KVVE
Sbjct: 1 GIDPFTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVE 60
Query: 865 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEA 908
LLL+H A + T + LH A K + +V+LLL +GAS A
Sbjct: 61 LLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNA 104
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 50/95 (52%)
Query: 220 GFTPLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 279
G T LHIA K I VE LL++G+ LH AC +KVVELLL+H A +
Sbjct: 10 GETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALV 69
Query: 280 EATTEVREPMLHIACKKNRIKVVELLLKHGASIEA 314
T + LH A K + +V+LLL +GAS A
Sbjct: 70 NTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNA 104
Score = 60.5 bits (145), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 72/153 (47%), Gaps = 26/153 (16%)
Query: 1168 GLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANV 1227
G T LH+ + + + E LL+N + + G+TPLH AC++G + + LLL A V
Sbjct: 10 GETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALV 69
Query: 1228 TVPKNFPSRXXXXXXXXXXXXXXYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNAT 1287
T Q +PLH +A+ GH IV LLL GAS NA
Sbjct: 70 NT------------------------TGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAV 105
Query: 1288 N-KGFTPLHHSAQQGHSTIVALLLDRGASPNAT 1319
N G P+ ++ + +++ LL ++ S +A+
Sbjct: 106 NIFGLRPVDYTDDESMKSLL-LLPEKNESSSAS 137
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 68/134 (50%), Gaps = 3/134 (2%)
Query: 1254 TTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATN-KGFTPLHHSAQQGHSTIVALLLDR 1312
T +G T LH ++ +G V LL G+ PN + G+TPLH + GH +V LLL
Sbjct: 6 TNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQH 65
Query: 1313 GASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTI 1372
A N T + +PLH A G + + +LLL A+ + G P+ ++ + ++
Sbjct: 66 KALVNTTG-YQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSL 124
Query: 1373 VALLLDRGASPNAT 1386
+ LL ++ S +A+
Sbjct: 125 L-LLPEKNESSSAS 137
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 60/116 (51%), Gaps = 18/116 (15%)
Query: 982 FSNLRVREQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKD--LYTALHIAAKEGQEEVA 1039
F+N R +T LHIAS G++ V LLQ+G+ D KD +T LH A G +V
Sbjct: 5 FTNHR---GETLLHIASIKGDIPSVEYLLQNGS--DPNVKDHAGWTPLHEACNHGHLKVV 59
Query: 1040 AVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDA-----------PVDF 1084
+LL++ A + +T + +PLH K GH+ + KLLL A PVD+
Sbjct: 60 ELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDY 115
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 49/108 (45%), Gaps = 14/108 (12%)
Query: 120 APISSKTKVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVD---FQG 176
A I LL+NG+ G+TPLH +GH+KV +LLLQ A V+ +Q
Sbjct: 17 ASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQN 76
Query: 177 KAPVDDVTVDYLTALHVAAHCGHARVAKTLLDKKADPNARALNGFTPL 224
+P LH AA GH + K LL A NA + G P+
Sbjct: 77 DSP-----------LHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPV 113
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 64/160 (40%), Gaps = 45/160 (28%)
Query: 905 SIEATTEVR-EPMLHIACKKNRIKVVELLLKHGASSHVVSCYSNVKVHVSLNKIQDVSSS 963
I+ T R E +LHIA K I VE LL++G+ NVK H
Sbjct: 1 GIDPFTNHRGETLLHIASIKGDIPSVEYLLQNGSDP-------NVKDHAGW--------- 44
Query: 964 ILRLATCDVLPQCETRLNFSNLRVREQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDL 1023
TPLH A G++ +V LLLQH A V++T
Sbjct: 45 ----------------------------TPLHEACNHGHLKVVELLLQHKALVNTTGYQN 76
Query: 1024 YTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLT 1063
+ LH AAK G ++ +LL GAS + G P+ T
Sbjct: 77 DSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYT 116
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 57/145 (39%), Gaps = 45/145 (31%)
Query: 872 SIEATTEVR-EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVE 930
I+ T R E +LHIA K I VE LL++G+ LH AC +KVVE
Sbjct: 1 GIDPFTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVE 60
Query: 931 LLLKHGASSHVVSCYSNVKVHVSLNKIQDVSSSILRLATCDVLPQCETRLNFSNLRVREQ 990
LLL+H A N +
Sbjct: 61 LLLQHKA--------------------------------------------LVNTTGYQN 76
Query: 991 QTPLHIASRLGNVDIVMLLLQHGAA 1015
+PLH A++ G+VDIV LLL +GA+
Sbjct: 77 DSPLHDAAKNGHVDIVKLLLSYGAS 101
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 3/101 (2%)
Query: 1121 LLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDR 1180
LL+ G+ PN + AG+TPLH + + GH + +LL+H A V+ +PLH A+
Sbjct: 29 LLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNGH 88
Query: 1181 VGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLL 1221
V + +LLL A + G P+ SM LLL
Sbjct: 89 VDIVKLLLSYGASRNAVNIFGLRPVDYT---DDESMKSLLL 126
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 48/91 (52%)
Query: 1135 GFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQV 1194
G T LH+++ +G LL++G+D + G TPLH + V ELLL++ A V
Sbjct: 10 GETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALV 69
Query: 1195 DTPTKKGFTPLHIACHYGQISMARLLLDQSA 1225
+T + +PLH A G + + +LLL A
Sbjct: 70 NTTGYQNDSPLHDAAKNGHVDIVKLLLSYGA 100
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 55/127 (43%), Gaps = 13/127 (10%)
Query: 1052 TTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEK 1111
T +G T LH+ G I + LLQ + + + G TPLH A ++ H V LLL+
Sbjct: 6 TNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQH 65
Query: 1112 GASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTP 1171
A + N +PLH +A GH D+ +LL +GA + GL P
Sbjct: 66 KALV-------------NTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRP 112
Query: 1172 LHLCAQE 1178
+ E
Sbjct: 113 VDYTDDE 119
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 7/102 (6%)
Query: 23 INPFGSHFQHNITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVI 82
I+PF +H T LH+A+ G V LL G++ + K G T LH A GH V+
Sbjct: 2 IDPFTNHRGE--TLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVV 59
Query: 83 EMLLEQGAPISSKTKVRGFYIL----RSGHEAVIEMLLEQGA 120
E+LL+ A +++ T + L ++GH ++++LL GA
Sbjct: 60 ELLLQHKALVNT-TGYQNDSPLHDAAKNGHVDIVKLLLSYGA 100
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 55/119 (46%), Gaps = 17/119 (14%)
Query: 66 GLTALHCAARSGHEAVIEMLLEQGAPISSKTKVRGFYILRSGHEAVIEMLLEQGAPISSK 125
G T LH A+ G +E LL+ G+ + K G+ L HEA L
Sbjct: 10 GETLLHIASIKGDIPSVEYLLQNGSDPNVKDHA-GWTPL---HEACNHGHL--------- 56
Query: 126 TKVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAP---VDFQGKAPVD 181
KV +LL++ A + +T + +PLH K GH+ + KLLL A V+ G PVD
Sbjct: 57 -KVVELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVD 114
>pdb|2F8X|K Chain K, Crystal Structure Of Activated Notch, Csl And Maml On Hes-1
Promoter Dna Sequence
pdb|3NBN|B Chain B, Crystal Structure Of A Dimer Of Notch Transcription Complex
Trimers On Hes1 Dna
pdb|3NBN|E Chain E, Crystal Structure Of A Dimer Of Notch Transcription Complex
Trimers On Hes1 Dna
pdb|3V79|K Chain K, Structure Of Human Notch1 Transcription Complex Including
Csl, Ram, Ank, And Maml-1 On Hes-1 Promoter Dna Sequence
Length = 256
Score = 76.3 bits (186), Expect = 1e-13, Method: Composition-based stats.
Identities = 75/228 (32%), Positives = 101/228 (44%), Gaps = 26/228 (11%)
Query: 1013 GAAVDSTTKDLYTALHIAA----------KEGQEEVAAVL---LENGASL-TSTTKKGFT 1058
G V+ D +T L IA+ E +E+ AV+ + GASL T + G T
Sbjct: 1 GMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGET 60
Query: 1059 PLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIA 1118
LHL +Y AK LL+ A + Q G TPLH A D Q V +L+ A+ D+
Sbjct: 61 ALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRAT-DL- 118
Query: 1119 TTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQE 1178
+A G TPL L+A M L+ ADV+ G + LH A
Sbjct: 119 ----------DARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAV 168
Query: 1179 DRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSAN 1226
+ V A +LLKN A D + TPL +A G A++LLD AN
Sbjct: 169 NNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFAN 216
Score = 64.3 bits (155), Expect = 5e-10, Method: Composition-based stats.
Identities = 69/252 (27%), Positives = 117/252 (46%), Gaps = 14/252 (5%)
Query: 146 GFTPLHLTG-KYGHIKVAKLLLQKDAPV---DF--QGKAPVDDVTVDYLTALHVAAHCGH 199
GFTPL + G ++ ++DAP DF QG + + TALH+AA
Sbjct: 11 GFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSR 70
Query: 200 ARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGAS-IEATTEVREPMLH 258
+ AK LL+ AD N + G TPLH A + V ++L+++ A+ ++A L
Sbjct: 71 SDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLI 130
Query: 259 IACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEV 318
+A + ++E L+ A + A ++ + LH A N + +LLK+GA+ +
Sbjct: 131 LAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNR 190
Query: 319 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 378
E L +A ++ + ++LL H A+ + T + IA ++ +V LL ++
Sbjct: 191 EETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNL-- 248
Query: 379 EATTEVREPMLH 390
VR P LH
Sbjct: 249 -----VRSPQLH 255
Score = 62.8 bits (151), Expect = 1e-09, Method: Composition-based stats.
Identities = 67/248 (27%), Positives = 103/248 (41%), Gaps = 39/248 (15%)
Query: 1082 VDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMD-------IATTLLEYGAKPNAESVA 1134
V+ +G +G TPL +AS LE G S + I+ + + + N
Sbjct: 4 VNVRGPDGFTPLMIASCSGGG------LETGNSEEEEDAPAVISDFIYQGASLHNQTDRT 57
Query: 1135 GFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNA-Q 1193
G T LHL+A +D + LLE AD + G TPLH D GV ++L++N A
Sbjct: 58 GETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATD 117
Query: 1194 VDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRXXXXXXXXXXXXXXYTN 1253
+D G TPL +A M L++ A+V
Sbjct: 118 LDARMHDGTTPLILAARLAVEGMLEDLINSHADVNA------------------------ 153
Query: 1254 TTDQGFTPLHHSAQQGHSTIVALLLDRGASPN-ATNKGFTPLHHSAQQGHSTIVALLLDR 1312
D G + LH +A + +LL GA+ + N+ TPL +A++G +LLD
Sbjct: 154 VDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDH 213
Query: 1313 GASPNATN 1320
A+ + T+
Sbjct: 214 FANRDITD 221
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 68/246 (27%), Positives = 109/246 (44%), Gaps = 28/246 (11%)
Query: 117 EQGAPISSKTKVAAVLLENGASL-TSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQ 175
E+ AP V + + GASL T + G T LHL +Y AK LL+ A + Q
Sbjct: 33 EEDAP-----AVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQ 87
Query: 176 ---GKAPVDDVTVDYLTALHVAAHCGHARVAKTLLDKKA-DPNARALNGFTPLHIACKKN 231
G+ P LH A V + L+ +A D +AR +G TPL +A +
Sbjct: 88 DNMGRTP-----------LHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLA 136
Query: 232 RIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLH 291
++E L+ A + A ++ + LH A N + +LLK+GA+ + E L
Sbjct: 137 VEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLF 196
Query: 292 IACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEV 351
+A ++ + ++LL H A+ + T + IA ++ +V LL ++ V
Sbjct: 197 LAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNL-------V 249
Query: 352 REPMLH 357
R P LH
Sbjct: 250 RSPQLH 255
Score = 57.0 bits (136), Expect = 6e-08, Method: Composition-based stats.
Identities = 70/267 (26%), Positives = 109/267 (40%), Gaps = 39/267 (14%)
Query: 1125 GAKPNAESVAGFTPLHLSA----------SEGHADMSAML---LEHGADV-SHAAKNGLT 1170
G N GFTPL +++ SE D A++ + GA + + + G T
Sbjct: 1 GMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGET 60
Query: 1171 PLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVP 1230
LHL A+ R A+ LL+ +A + G TPLH A + ++L+ A
Sbjct: 61 ALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRAT---- 116
Query: 1231 KNFPSRXXXXXXXXXXXXXXYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATNK- 1289
+ +R G TPL +A+ ++ L++ A NA +
Sbjct: 117 -DLDARMH------------------DGTTPLILAARLAVEGMLEDLINSHADVNAVDDL 157
Query: 1290 GFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSAN 1349
G + LH +A + +LL GA+ + N R TPL +A G A++LLD AN
Sbjct: 158 GKSALHWAAAVNNVDAAVVLLKNGANKDMQN-NREETPLFLAAREGSYETAKVLLDHFAN 216
Query: 1350 VSCTTDQGFTPLHHSAQQGHSTIVALL 1376
T P + ++ H IV LL
Sbjct: 217 RDITDHMDRLPRDIAQERMHHDIVRLL 243
Score = 54.7 bits (130), Expect = 4e-07, Method: Composition-based stats.
Identities = 63/260 (24%), Positives = 114/260 (43%), Gaps = 22/260 (8%)
Query: 212 DPNARALNGFTPLHIAC-------------KKNRIKVVELLLKHGASIEATTE-VREPML 257
D N R +GFTPL IA +++ V+ + GAS+ T+ E L
Sbjct: 3 DVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETAL 62
Query: 258 HIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGAS-IEATT 316
H+A + +R + LL+ A + LH A + V ++L+++ A+ ++A
Sbjct: 63 HLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARM 122
Query: 317 EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 376
L +A + ++E L+ A + A ++ + LH A N + +LLK+GA
Sbjct: 123 HDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGA 182
Query: 377 SIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVEL 436
+ + E L +A ++ + ++LL H A+ + T + IA ++ +V L
Sbjct: 183 NKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRL 242
Query: 437 LLKHGASIEATTEVREPMLH 456
L ++ VR P LH
Sbjct: 243 LDEYNL-------VRSPQLH 255
Score = 54.3 bits (129), Expect = 5e-07, Method: Composition-based stats.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 13/218 (5%)
Query: 895 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASSHVVSCYSNVKVHVS 953
V+ + GAS+ T+ E LH+A + +R + LL+ A +++ +H +
Sbjct: 39 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAA 98
Query: 954 LN-KIQDVSSSILRLATCDVLPQCETRLNFSNLRVREQQTPLHIASRLGNVDIVMLLLQH 1012
++ Q V ++R D+ + R+ + TPL +A+RL ++ L+
Sbjct: 99 VSADAQGVFQILIRNRATDL-----------DARMHDGTTPLILAARLAVEGMLEDLINS 147
Query: 1013 GAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVA 1072
A V++ +ALH AA + A VLL+NGA+ + TPL L + G + A
Sbjct: 148 HADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETA 207
Query: 1073 KLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLE 1110
K+LL A D P +A H ++ LL E
Sbjct: 208 KVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDE 245
Score = 50.8 bits (120), Expect = 6e-06, Method: Composition-based stats.
Identities = 72/270 (26%), Positives = 108/270 (40%), Gaps = 53/270 (19%)
Query: 1056 GFTPLHLTG-KYGHIKVAKLLLQKDAPV---DF--QG--------KNGVTPLHVASHYDH 1101
GFTPL + G ++ ++DAP DF QG + G T LH+A+ Y
Sbjct: 11 GFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSR 70
Query: 1102 QNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGA-D 1160
D A LLE A N + G TPLH + S + +L+ + A D
Sbjct: 71 S-------------DAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATD 117
Query: 1161 VSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLL 1220
+ +G TPL L A+ G+ E L+ ++A V+ G + LH A + A +L
Sbjct: 118 LDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVL 177
Query: 1221 LDQSANVTVPKNFPSRXXXXXXXXXXXXXXYTNTTDQGFTPLHHSAQQGHSTIVALLLDR 1280
L AN + N TPL +A++G +LLD
Sbjct: 178 LKNGANKDMQNNREE------------------------TPLFLAAREGSYETAKVLLDH 213
Query: 1281 GASPNATNK-GFTPLHHSAQQGHSTIVALL 1309
A+ + T+ P + ++ H IV LL
Sbjct: 214 FANRDITDHMDRLPRDIAQERMHHDIVRLL 243
Score = 46.2 bits (108), Expect = 1e-04, Method: Composition-based stats.
Identities = 53/224 (23%), Positives = 100/224 (44%), Gaps = 9/224 (4%)
Query: 301 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 359
V+ + GAS+ T+ E LH+A + +R + LL+ A + LH A
Sbjct: 39 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAA 98
Query: 360 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 418
+ V ++L+++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 99 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 158
Query: 419 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 478
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 159 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 218
Query: 479 ATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLH 522
T + IA ++ +V LL ++ VR P LH
Sbjct: 219 ITDHMDRLPRDIAQERMHHDIVRLLDEYNL-------VRSPQLH 255
Score = 46.2 bits (108), Expect = 1e-04, Method: Composition-based stats.
Identities = 53/224 (23%), Positives = 100/224 (44%), Gaps = 9/224 (4%)
Query: 334 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 392
V+ + GAS+ T+ E LH+A + +R + LL+ A + LH A
Sbjct: 39 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAA 98
Query: 393 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 451
+ V ++L+++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 99 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 158
Query: 452 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 511
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 159 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 218
Query: 512 ATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLH 555
T + IA ++ +V LL ++ VR P LH
Sbjct: 219 ITDHMDRLPRDIAQERMHHDIVRLLDEYNL-------VRSPQLH 255
Score = 46.2 bits (108), Expect = 1e-04, Method: Composition-based stats.
Identities = 53/224 (23%), Positives = 100/224 (44%), Gaps = 9/224 (4%)
Query: 367 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 425
V+ + GAS+ T+ E LH+A + +R + LL+ A + LH A
Sbjct: 39 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAA 98
Query: 426 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 484
+ V ++L+++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 99 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 158
Query: 485 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 544
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 159 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 218
Query: 545 ATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLH 588
T + IA ++ +V LL ++ VR P LH
Sbjct: 219 ITDHMDRLPRDIAQERMHHDIVRLLDEYNL-------VRSPQLH 255
Score = 46.2 bits (108), Expect = 1e-04, Method: Composition-based stats.
Identities = 53/224 (23%), Positives = 100/224 (44%), Gaps = 9/224 (4%)
Query: 400 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 458
V+ + GAS+ T+ E LH+A + +R + LL+ A + LH A
Sbjct: 39 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAA 98
Query: 459 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 517
+ V ++L+++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 99 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 158
Query: 518 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 577
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 159 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 218
Query: 578 ATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLH 621
T + IA ++ +V LL ++ VR P LH
Sbjct: 219 ITDHMDRLPRDIAQERMHHDIVRLLDEYNL-------VRSPQLH 255
Score = 46.2 bits (108), Expect = 1e-04, Method: Composition-based stats.
Identities = 53/224 (23%), Positives = 100/224 (44%), Gaps = 9/224 (4%)
Query: 433 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 491
V+ + GAS+ T+ E LH+A + +R + LL+ A + LH A
Sbjct: 39 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAA 98
Query: 492 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 550
+ V ++L+++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 99 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 158
Query: 551 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 610
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 159 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 218
Query: 611 ATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLH 654
T + IA ++ +V LL ++ VR P LH
Sbjct: 219 ITDHMDRLPRDIAQERMHHDIVRLLDEYNL-------VRSPQLH 255
Score = 46.2 bits (108), Expect = 1e-04, Method: Composition-based stats.
Identities = 53/224 (23%), Positives = 100/224 (44%), Gaps = 9/224 (4%)
Query: 466 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 524
V+ + GAS+ T+ E LH+A + +R + LL+ A + LH A
Sbjct: 39 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAA 98
Query: 525 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 583
+ V ++L+++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 99 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 158
Query: 584 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 643
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 159 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 218
Query: 644 ATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLH 687
T + IA ++ +V LL ++ VR P LH
Sbjct: 219 ITDHMDRLPRDIAQERMHHDIVRLLDEYNL-------VRSPQLH 255
Score = 46.2 bits (108), Expect = 1e-04, Method: Composition-based stats.
Identities = 53/224 (23%), Positives = 100/224 (44%), Gaps = 9/224 (4%)
Query: 499 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 557
V+ + GAS+ T+ E LH+A + +R + LL+ A + LH A
Sbjct: 39 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAA 98
Query: 558 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 616
+ V ++L+++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 99 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 158
Query: 617 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 676
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 159 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 218
Query: 677 ATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLH 720
T + IA ++ +V LL ++ VR P LH
Sbjct: 219 ITDHMDRLPRDIAQERMHHDIVRLLDEYNL-------VRSPQLH 255
Score = 46.2 bits (108), Expect = 1e-04, Method: Composition-based stats.
Identities = 53/224 (23%), Positives = 100/224 (44%), Gaps = 9/224 (4%)
Query: 532 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 590
V+ + GAS+ T+ E LH+A + +R + LL+ A + LH A
Sbjct: 39 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAA 98
Query: 591 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 649
+ V ++L+++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 99 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 158
Query: 650 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 709
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 159 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 218
Query: 710 ATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLH 753
T + IA ++ +V LL ++ VR P LH
Sbjct: 219 ITDHMDRLPRDIAQERMHHDIVRLLDEYNL-------VRSPQLH 255
Score = 46.2 bits (108), Expect = 1e-04, Method: Composition-based stats.
Identities = 53/224 (23%), Positives = 100/224 (44%), Gaps = 9/224 (4%)
Query: 565 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 623
V+ + GAS+ T+ E LH+A + +R + LL+ A + LH A
Sbjct: 39 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAA 98
Query: 624 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 682
+ V ++L+++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 99 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 158
Query: 683 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 742
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 159 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 218
Query: 743 ATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLH 786
T + IA ++ +V LL ++ VR P LH
Sbjct: 219 ITDHMDRLPRDIAQERMHHDIVRLLDEYNL-------VRSPQLH 255
Score = 46.2 bits (108), Expect = 1e-04, Method: Composition-based stats.
Identities = 53/224 (23%), Positives = 100/224 (44%), Gaps = 9/224 (4%)
Query: 598 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 656
V+ + GAS+ T+ E LH+A + +R + LL+ A + LH A
Sbjct: 39 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAA 98
Query: 657 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 715
+ V ++L+++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 99 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 158
Query: 716 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 775
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 159 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 218
Query: 776 ATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLH 819
T + IA ++ +V LL ++ VR P LH
Sbjct: 219 ITDHMDRLPRDIAQERMHHDIVRLLDEYNL-------VRSPQLH 255
Score = 46.2 bits (108), Expect = 1e-04, Method: Composition-based stats.
Identities = 53/224 (23%), Positives = 100/224 (44%), Gaps = 9/224 (4%)
Query: 631 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 689
V+ + GAS+ T+ E LH+A + +R + LL+ A + LH A
Sbjct: 39 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAA 98
Query: 690 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 748
+ V ++L+++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 99 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 158
Query: 749 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 808
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 159 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 218
Query: 809 ATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLH 852
T + IA ++ +V LL ++ VR P LH
Sbjct: 219 ITDHMDRLPRDIAQERMHHDIVRLLDEYNL-------VRSPQLH 255
Score = 46.2 bits (108), Expect = 1e-04, Method: Composition-based stats.
Identities = 53/224 (23%), Positives = 100/224 (44%), Gaps = 9/224 (4%)
Query: 664 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 722
V+ + GAS+ T+ E LH+A + +R + LL+ A + LH A
Sbjct: 39 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAA 98
Query: 723 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 781
+ V ++L+++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 99 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 158
Query: 782 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 841
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 159 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 218
Query: 842 ATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLH 885
T + IA ++ +V LL ++ VR P LH
Sbjct: 219 ITDHMDRLPRDIAQERMHHDIVRLLDEYNL-------VRSPQLH 255
Score = 46.2 bits (108), Expect = 1e-04, Method: Composition-based stats.
Identities = 53/224 (23%), Positives = 100/224 (44%), Gaps = 9/224 (4%)
Query: 697 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 755
V+ + GAS+ T+ E LH+A + +R + LL+ A + LH A
Sbjct: 39 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAA 98
Query: 756 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 814
+ V ++L+++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 99 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 158
Query: 815 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 874
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 159 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 218
Query: 875 ATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLH 918
T + IA ++ +V LL ++ VR P LH
Sbjct: 219 ITDHMDRLPRDIAQERMHHDIVRLLDEYNL-------VRSPQLH 255
Score = 45.8 bits (107), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/137 (29%), Positives = 60/137 (43%), Gaps = 2/137 (1%)
Query: 1253 NTTDQ-GFTPLHHSAQQGHSTIVALLLDRGASPN-ATNKGFTPLHHSAQQGHSTIVALLL 1310
N TD+ G T LH +A+ S LL+ A N N G TPLH + + +L+
Sbjct: 52 NQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILI 111
Query: 1311 DRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHS 1370
A+ G TPL +A M L++ A+V+ D G + LH +A +
Sbjct: 112 RNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNV 171
Query: 1371 TIVALLLDRGASPNATN 1387
+LL GA+ + N
Sbjct: 172 DAAVVLLKNGANKDMQN 188
Score = 43.1 bits (100), Expect = 0.001, Method: Composition-based stats.
Identities = 48/205 (23%), Positives = 93/205 (45%), Gaps = 2/205 (0%)
Query: 730 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 788
V+ + GAS+ T+ E LH+A + +R + LL+ A + LH A
Sbjct: 39 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAA 98
Query: 789 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 847
+ V ++L+++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 99 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 158
Query: 848 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 907
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 159 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 218
Query: 908 ATTEVREPMLHIACKKNRIKVVELL 932
T + IA ++ +V LL
Sbjct: 219 ITDHMDRLPRDIAQERMHHDIVRLL 243
Score = 42.4 bits (98), Expect = 0.002, Method: Composition-based stats.
Identities = 63/246 (25%), Positives = 107/246 (43%), Gaps = 31/246 (12%)
Query: 48 MVTLLLSRGANIDNKT-RDGLTALHCAARSGHEAVIEMLLEQGAPISSKTKVRGFYILRS 106
+++ + +GA++ N+T R G TALH AAR + LLE A + + + R+
Sbjct: 39 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMG-----RT 93
Query: 107 GHEAVIEMLLEQGAPISSKTKVAAVLLENGAS-LTSTTKKGFTPLHLTGKYGHIKVAKLL 165
A + + V +L+ N A+ L + G TPL L + + + L
Sbjct: 94 PLHAAVS---------ADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDL 144
Query: 166 LQKDAPVDFQGKAPVDDVTVDYLTALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLH 225
+ A V+ VDD+ +ALH AA + A LL A+ + + TPL
Sbjct: 145 INSHADVN-----AVDDLGK---SALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLF 196
Query: 226 IACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEV 285
+A ++ + ++LL H A+ + T + IA ++ +V LL ++ V
Sbjct: 197 LAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNL-------V 249
Query: 286 REPMLH 291
R P LH
Sbjct: 250 RSPQLH 255
Score = 40.8 bits (94), Expect = 0.005, Method: Composition-based stats.
Identities = 42/181 (23%), Positives = 83/181 (45%), Gaps = 2/181 (1%)
Query: 763 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 821
V+ + GAS+ T+ E LH+A + +R + LL+ A + LH A
Sbjct: 39 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAA 98
Query: 822 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 880
+ V ++L+++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 99 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 158
Query: 881 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASSH 940
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+
Sbjct: 159 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 218
Query: 941 V 941
+
Sbjct: 219 I 219
Score = 40.4 bits (93), Expect = 0.007, Method: Composition-based stats.
Identities = 54/224 (24%), Positives = 87/224 (38%), Gaps = 28/224 (12%)
Query: 35 TPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISS 94
T LH+AA++ +++ LL A+ + + G T LH A + + V ++L+ A
Sbjct: 60 TALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLD 119
Query: 95 KTKVRGFYILRSGHEAVIEMLLEQGAPISSKTKVAAVLLENGASLTSTTKKGFTPLHLTG 154
G L +E +LE L+ + A + + G + LH
Sbjct: 120 ARMHDGTTPLILAARLAVEGMLED-------------LINSHADVNAVDDLGKSALHWAA 166
Query: 155 KYGHIKVAKLLLQKDAPVDFQGKAPVDDVTVDYLTALHVAAHCGHARVAKTLLDKKADPN 214
++ A +LL+ A D Q T L +AA G AK LLD A+ +
Sbjct: 167 AVNNVDAAVVLLKNGANKDMQNNREE--------TPLFLAAREGSYETAKVLLDHFANRD 218
Query: 215 ARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVREPMLH 258
P IA ++ +V LL ++ VR P LH
Sbjct: 219 ITDHMDRLPRDIAQERMHHDIVRLLDEYNL-------VRSPQLH 255
Score = 39.7 bits (91), Expect = 0.012, Method: Composition-based stats.
Identities = 36/136 (26%), Positives = 64/136 (47%), Gaps = 1/136 (0%)
Query: 983 SNLRVREQQTPLHIASRLGNVDIVMLLLQHGAA-VDSTTKDLYTALHIAAKEGQEEVAAV 1041
+N++ +TPLH A + +L+++ A +D+ D T L +AA+ E +
Sbjct: 84 ANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLED 143
Query: 1042 LLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDH 1101
L+ + A + + G + LH ++ A +LL+ A D Q TPL +A+
Sbjct: 144 LINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGS 203
Query: 1102 QNVALLLLEKGASMDI 1117
A +LL+ A+ DI
Sbjct: 204 YETAKVLLDHFANRDI 219
Score = 39.3 bits (90), Expect = 0.015, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 13/106 (12%)
Query: 1290 GFTPL-------------HHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQ 1336
GFTPL + ++ +++ + +GAS + G T LH+A Y +
Sbjct: 11 GFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSR 70
Query: 1337 ISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGAS 1382
A+ LL+ SA+ + + G TPLH + + +L+ A+
Sbjct: 71 SDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRAT 116
>pdb|2XZD|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4
pdb|2XZD|H Chain H, Caspase-3 In Complex With An Inhibitory Darpin-3.4
Length = 136
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 69/133 (51%), Gaps = 13/133 (9%)
Query: 1022 DLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAP 1081
DL L A + GQ++ +L+ NGA + + G TPLHL K GH+++ ++LL+ A
Sbjct: 13 DLGKKLLEATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGAD 72
Query: 1082 VDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHL 1141
V+ G TPLH+A+ H ++I LLEYGA NA+ G T +
Sbjct: 73 VNASDIWGRTPLHLAATVGH-------------LEIVEVLLEYGADVNAQDKFGKTAFDI 119
Query: 1142 SASEGHADMSAML 1154
S G+ D++ +L
Sbjct: 120 SIDNGNEDLAEIL 132
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 57/100 (57%)
Query: 1121 LLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDR 1180
L+ GA NA AG TPLHL+A GH ++ +LL+HGADV+ + G TPLHL A
Sbjct: 33 LMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDIWGRTPLHLAATVGH 92
Query: 1181 VGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLL 1220
+ + E+LL+ A V+ K G T I+ G +A +L
Sbjct: 93 LEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEIL 132
Score = 70.1 bits (170), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 60/114 (52%)
Query: 194 AAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVR 253
A G + L+ AD NA G TPLH+A K+ +++VE+LLKHGA + A+
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDIWG 80
Query: 254 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 307
LH+A +++VE+LL++GA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 70.1 bits (170), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 67/112 (59%)
Query: 997 ASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKG 1056
A+R G D V +L+ +GA V++ T LH+AAK G E+ VLL++GA + ++ G
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDIWG 80
Query: 1057 FTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLL 1108
TPLHL GH+++ ++LL+ A V+ Q K G T ++ ++++A +L
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEIL 132
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 65/127 (51%), Gaps = 13/127 (10%)
Query: 1065 KYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEY 1124
+ G ++L+ A V+ GVTPLH+A+ H ++I LL++
Sbjct: 23 RAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGH-------------LEIVEVLLKH 69
Query: 1125 GAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVA 1184
GA NA + G TPLHL+A+ GH ++ +LLE+GADV+ K G T + +A
Sbjct: 70 GADVNASDIWGRTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLA 129
Query: 1185 ELLLKNN 1191
E+L K N
Sbjct: 130 EILQKLN 136
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Query: 1256 DQGFTPLHHSAQQGHSTIVALLLDRGASPNATN-KGFTPLHHSAQQGHSTIVALLLDRGA 1314
D G TPLH +A++GH IV +LL GA NA++ G TPLH +A GH IV +LL+ GA
Sbjct: 45 DAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDIWGRTPLHLAATVGHLEIVEVLLEYGA 104
Query: 1315 SPNATNKTRGFTPLHIACHYGQISMARLL 1343
NA +K G T I+ G +A +L
Sbjct: 105 DVNAQDKF-GKTAFDISIDNGNEDLAEIL 132
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 61/114 (53%)
Query: 227 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 286
A + + V +L+ +GA + A + LH+A K+ +++VE+LLKHGA + A+
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDIWG 80
Query: 287 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 340
LH+A +++VE+LL++GA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 61/114 (53%)
Query: 260 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 319
A + + V +L+ +GA + A + LH+A K+ +++VE+LLKHGA + A+
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDIWG 80
Query: 320 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 373
LH+A +++VE+LL++GA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 61/114 (53%)
Query: 293 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 352
A + + V +L+ +GA + A + LH+A K+ +++VE+LLKHGA + A+
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDIWG 80
Query: 353 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 406
LH+A +++VE+LL++GA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 61/114 (53%)
Query: 326 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 385
A + + V +L+ +GA + A + LH+A K+ +++VE+LLKHGA + A+
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDIWG 80
Query: 386 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 439
LH+A +++VE+LL++GA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 61/114 (53%)
Query: 359 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 418
A + + V +L+ +GA + A + LH+A K+ +++VE+LLKHGA + A+
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDIWG 80
Query: 419 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 472
LH+A +++VE+LL++GA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 61/114 (53%)
Query: 392 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 451
A + + V +L+ +GA + A + LH+A K+ +++VE+LLKHGA + A+
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDIWG 80
Query: 452 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 505
LH+A +++VE+LL++GA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 61/114 (53%)
Query: 425 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 484
A + + V +L+ +GA + A + LH+A K+ +++VE+LLKHGA + A+
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDIWG 80
Query: 485 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 538
LH+A +++VE+LL++GA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 61/114 (53%)
Query: 458 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 517
A + + V +L+ +GA + A + LH+A K+ +++VE+LLKHGA + A+
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDIWG 80
Query: 518 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 571
LH+A +++VE+LL++GA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 61/114 (53%)
Query: 491 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 550
A + + V +L+ +GA + A + LH+A K+ +++VE+LLKHGA + A+
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDIWG 80
Query: 551 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 604
LH+A +++VE+LL++GA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 61/114 (53%)
Query: 524 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 583
A + + V +L+ +GA + A + LH+A K+ +++VE+LLKHGA + A+
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDIWG 80
Query: 584 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 637
LH+A +++VE+LL++GA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 61/114 (53%)
Query: 557 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 616
A + + V +L+ +GA + A + LH+A K+ +++VE+LLKHGA + A+
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDIWG 80
Query: 617 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 670
LH+A +++VE+LL++GA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 61/114 (53%)
Query: 590 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 649
A + + V +L+ +GA + A + LH+A K+ +++VE+LLKHGA + A+
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDIWG 80
Query: 650 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 703
LH+A +++VE+LL++GA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 61/114 (53%)
Query: 623 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 682
A + + V +L+ +GA + A + LH+A K+ +++VE+LLKHGA + A+
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDIWG 80
Query: 683 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 736
LH+A +++VE+LL++GA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 61/114 (53%)
Query: 656 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 715
A + + V +L+ +GA + A + LH+A K+ +++VE+LLKHGA + A+
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDIWG 80
Query: 716 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 769
LH+A +++VE+LL++GA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 61/114 (53%)
Query: 689 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 748
A + + V +L+ +GA + A + LH+A K+ +++VE+LLKHGA + A+
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDIWG 80
Query: 749 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 802
LH+A +++VE+LL++GA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 61/114 (53%)
Query: 722 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 781
A + + V +L+ +GA + A + LH+A K+ +++VE+LLKHGA + A+
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDIWG 80
Query: 782 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 835
LH+A +++VE+LL++GA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 61/114 (53%)
Query: 755 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 814
A + + V +L+ +GA + A + LH+A K+ +++VE+LLKHGA + A+
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDIWG 80
Query: 815 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 868
LH+A +++VE+LL++GA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 61/114 (53%)
Query: 788 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 847
A + + V +L+ +GA + A + LH+A K+ +++VE+LLKHGA + A+
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDIWG 80
Query: 848 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 901
LH+A +++VE+LL++GA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 61/114 (53%)
Query: 821 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 880
A + + V +L+ +GA + A + LH+A K+ +++VE+LLKHGA + A+
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDIWG 80
Query: 881 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 934
LH+A +++VE+LL++GA + A + + I+ + E+L K
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 63.9 bits (154), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 61/116 (52%), Gaps = 2/116 (1%)
Query: 1262 LHHSAQQGHSTIVALLLDRGASPNATNK-GFTPLHHSAQQGHSTIVALLLDRGASPNATN 1320
L + + G V +L+ GA NA + G TPLH +A++GH IV +LL GA NA++
Sbjct: 18 LLEATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASD 77
Query: 1321 KTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALL 1376
G TPLH+A G + + +LL+ A+V+ G T S G+ + +L
Sbjct: 78 -IWGRTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEIL 132
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 61/113 (53%)
Query: 854 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 913
A + + V +L+ +GA + A + LH+A K+ +++VE+LLKHGA + A+
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDIWG 80
Query: 914 EPMLHIACKKNRIKVVELLLKHGASSHVVSCYSNVKVHVSLNKIQDVSSSILR 966
LH+A +++VE+LL++GA + + +S++ + + IL+
Sbjct: 81 RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQ 133
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 1294 LHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCT 1353
L + + G V +L+ GA NA + G TPLH+A G + + +LL A+V+ +
Sbjct: 18 LLEATRAGQDDEVRILMANGADVNAMDDA-GVTPLHLAAKRGHLEIVEVLLKHGADVNAS 76
Query: 1354 TDQGFTPLHHSAQQGHSTIVALLLDRGASPNATNK 1388
G TPLH +A GH IV +LL+ GA NA +K
Sbjct: 77 DIWGRTPLHLAATVGHLEIVEVLLEYGADVNAQDK 111
Score = 60.8 bits (146), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 49/88 (55%)
Query: 1146 GHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPL 1205
G D +L+ +GADV+ G+TPLHL A+ + + E+LLK+ A V+ G TPL
Sbjct: 25 GQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDIWGRTPL 84
Query: 1206 HIACHYGQISMARLLLDQSANVTVPKNF 1233
H+A G + + +LL+ A+V F
Sbjct: 85 HLAATVGHLEIVEVLLEYGADVNAQDKF 112
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 44/156 (28%)
Query: 887 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASSHVVSCYS 946
A + + V +L+ +GA + A + LH+A K+ +++VE+LLKHGA
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGAD-------- 72
Query: 947 NVKVHVSLNKIQDVSSSILRLATCDVLPQCETRLNFSNLRVREQQTPLHIASRLGNVDIV 1006
+N S++ R TPLH+A+ +G+++IV
Sbjct: 73 ---------------------------------VNASDIWGR---TPLHLAATVGHLEIV 96
Query: 1007 MLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVL 1042
+LL++GA V++ K TA I+ G E++A +L
Sbjct: 97 EVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEIL 132
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 54/84 (64%)
Query: 992 TPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTS 1051
TPLH+A++ G+++IV +LL+HGA V+++ T LH+AA G E+ VLLE GA + +
Sbjct: 49 TPLHLAAKRGHLEIVEVLLKHGADVNASDIWGRTPLHLAATVGHLEIVEVLLEYGADVNA 108
Query: 1052 TTKKGFTPLHLTGKYGHIKVAKLL 1075
K G T ++ G+ +A++L
Sbjct: 109 QDKFGKTAFDISIDNGNEDLAEIL 132
Score = 57.8 bits (138), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 8/120 (6%)
Query: 155 KYGHIKVAKLLLQKDAPVDFQGKAPVDDVTVDYLTALHVAAHCGHARVAKTLLDKKADPN 214
+ G ++L+ A V+ +DD V T LH+AA GH + + LL AD N
Sbjct: 23 RAGQDDEVRILMANGADVN-----AMDDAGV---TPLHLAAKRGHLEIVEVLLKHGADVN 74
Query: 215 ARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 274
A + G TPLH+A +++VE+LL++GA + A + + I+ + E+L K
Sbjct: 75 ASDIWGRTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 53/85 (62%), Gaps = 3/85 (3%)
Query: 34 ITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPIS 93
+TPLH+AAK G +V +LL GA+++ G T LH AA GH ++E+LLE GA ++
Sbjct: 48 VTPLHLAAKRGHLEIVEVLLKHGADVNASDIWGRTPLHLAATVGHLEIVEVLLEYGADVN 107
Query: 94 SKTKV--RGFYI-LRSGHEAVIEML 115
++ K F I + +G+E + E+L
Sbjct: 108 AQDKFGKTAFDISIDNGNEDLAEIL 132
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 57/94 (60%), Gaps = 5/94 (5%)
Query: 40 AAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISSKTKVR 99
A + G+ + V +L++ GA+++ G+T LH AA+ GH ++E+LL+ GA +++ + +
Sbjct: 21 ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNA-SDIW 79
Query: 100 GFYILR----SGHEAVIEMLLEQGAPISSKTKVA 129
G L GH ++E+LLE GA ++++ K
Sbjct: 80 GRTPLHLAATVGHLEIVEVLLEYGADVNAQDKFG 113
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 20/101 (19%)
Query: 105 RSGHEAVIEMLLEQGAPISSKT----------------KVAAVLLENGASLTSTTKKGFT 148
R+G + + +L+ GA +++ ++ VLL++GA + ++ G T
Sbjct: 23 RAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDIWGRT 82
Query: 149 PLHLTGKYGHIKVAKLLLQKDAPVDFQ---GKAPVDDVTVD 186
PLHL GH+++ ++LL+ A V+ Q GK D+++D
Sbjct: 83 PLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAF-DISID 122
>pdb|1S70|B Chain B, Complex Between Protein Ser/thr Phosphatase-1 (delta) And
The Myosin Phosphatase Targeting Subunit 1 (mypt1)
Length = 299
Score = 75.9 bits (185), Expect = 2e-13, Method: Composition-based stats.
Identities = 59/226 (26%), Positives = 100/226 (44%), Gaps = 13/226 (5%)
Query: 1142 SASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKG 1201
+ S G + LLE GAD+++A +GLT LH +D V + + L++N A ++ P +G
Sbjct: 47 ACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEG 106
Query: 1202 FTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRXXXXXXXXXXXXXXYTNTTDQGFTP 1261
+ PLH A G + +A L+ Q A+V + QG
Sbjct: 107 WIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDI 166
Query: 1262 LHHSAQQGHSTIVALLLDRGASPNA--------TNKGFTPLHHSAQQGHSTIVALLLDRG 1313
+A++ I +L D N+ G T LH +A +G++ ++ LL+
Sbjct: 167 --EAARKEEERI--MLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQAR 222
Query: 1314 ASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFT 1359
N + G+TPLH A H+G+ R+L++ ++ G T
Sbjct: 223 YDVNIKDYD-GWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQT 267
Score = 75.5 bits (184), Expect = 2e-13, Method: Composition-based stats.
Identities = 59/222 (26%), Positives = 101/222 (45%), Gaps = 19/222 (8%)
Query: 1001 GNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPL 1060
G+ + V+ LL+ GA ++ D TALH A + ++ L+ENGA++ +G+ PL
Sbjct: 51 GDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPL 110
Query: 1061 HLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATT 1120
H G++ +A+ L+ + A V G TPL +A + + ++
Sbjct: 111 HAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEEL--------LQNEVNRQ 162
Query: 1121 LLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDR 1180
++ A E + GH + DV H AK+G T LH+ A +
Sbjct: 163 GVDIEAARKEEERIMLRDARQWLNSGHIN----------DVRH-AKSGGTALHVAAAKGY 211
Query: 1181 VGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLD 1222
V +LL++ V+ G+TPLH A H+G+ R+L++
Sbjct: 212 TEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVE 253
Score = 61.6 bits (148), Expect = 3e-09, Method: Composition-based stats.
Identities = 64/241 (26%), Positives = 106/241 (43%), Gaps = 35/241 (14%)
Query: 40 AAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISSKTKVR 99
A G V LL RGA+I+ DGLTALH A + +++ L+E GA I+
Sbjct: 47 ACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANIN------ 100
Query: 100 GFYILRSGHEAVIEMLLEQGAPISSKTKVAAVLLENGASLTSTTKKGFTPLHL------- 152
+ +E I + A +A L+ GA + + +G TPL +
Sbjct: 101 -----QPDNEGWIPL---HAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAME 152
Query: 153 ------TGKYG-HIKVAK----LLLQKDAPVDFQGKAPVDDV--TVDYLTALHVAAHCGH 199
+ G I+ A+ ++ +DA + ++DV TALHVAA G+
Sbjct: 153 ELLQNEVNRQGVDIEAARKEEERIMLRDAR-QWLNSGHINDVRHAKSGGTALHVAAAKGY 211
Query: 200 ARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHI 259
V K L+ + D N + +G+TPLH A + + +L+++ +EA +V + +
Sbjct: 212 TEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDV 271
Query: 260 A 260
A
Sbjct: 272 A 272
Score = 60.1 bits (144), Expect = 7e-09, Method: Composition-based stats.
Identities = 60/249 (24%), Positives = 95/249 (38%), Gaps = 52/249 (20%)
Query: 1167 NGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSAN 1226
+G L C+ D V LL + A ++ G T LH AC + M + L++ AN
Sbjct: 40 DGAVFLAACSSGDTEEVLRLL-ERGADINYANVDGLTALHQACIDDNVDMVKFLVENGAN 98
Query: 1227 VTVPKNFPSRXXXXXXXXXXXXXXYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNA 1286
+ P N +G+ PLH +A G+ I L+ +GA A
Sbjct: 99 INQPDN------------------------EGWIPLHAAASCGYLDIAEYLISQGAHVGA 134
Query: 1287 TN-KGFTPLH----------------------HSAQQGHSTIV----ALLLDRGASPNAT 1319
N +G TPL +A++ I+ L+ G +
Sbjct: 135 VNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVR 194
Query: 1320 NKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDR 1379
+ G T LH+A G + +LL+ +V+ G+TPLH +A G +L++
Sbjct: 195 HAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVEN 254
Query: 1380 GASPNATNK 1388
A NK
Sbjct: 255 LCDMEAVNK 263
Score = 58.2 bits (139), Expect = 3e-08, Method: Composition-based stats.
Identities = 54/233 (23%), Positives = 107/233 (45%), Gaps = 30/233 (12%)
Query: 980 LNFSNLRVREQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVA 1039
+N++N+ + T LH A NVD+V L+++GA ++ + + LH AA G ++A
Sbjct: 66 INYANV---DGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIA 122
Query: 1040 AVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHY 1099
L+ GA + + +G TPL + + ++ + + + VD + A+
Sbjct: 123 EYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQG-VDIE----------AARK 171
Query: 1100 DHQNVAL----LLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLL 1155
+ + + L L G D+ + +G T LH++A++G+ ++ +L+
Sbjct: 172 EEERIMLRDARQWLNSGHINDV------------RHAKSGGTALHVAAAKGYTEVLKLLI 219
Query: 1156 EHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIA 1208
+ DV+ +G TPLH A + +L++N ++ K G T +A
Sbjct: 220 QARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVA 272
Score = 55.1 bits (131), Expect = 3e-07, Method: Composition-based stats.
Identities = 55/221 (24%), Positives = 94/221 (42%), Gaps = 16/221 (7%)
Query: 854 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 913
AC + V LL+ GA I LH AC + + +V+ L+++GA+I
Sbjct: 47 ACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEG 106
Query: 914 EPMLHIACKKNRIKVVELLLKHGASSHVVSCYSNVKVHV--SLNKIQDVSSSILRLAT-C 970
LH A + + E L+ GA V+ + + + + + + + R
Sbjct: 107 WIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDI 166
Query: 971 DVLPQCETRLNFSNLR----------VREQQ---TPLHIASRLGNVDIVMLLLQHGAAVD 1017
+ + E R+ + R VR + T LH+A+ G +++ LL+Q V+
Sbjct: 167 EAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVN 226
Query: 1018 STTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFT 1058
D +T LH AA G+EE +L+EN + + K G T
Sbjct: 227 IKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQT 267
Score = 53.9 bits (128), Expect = 6e-07, Method: Composition-based stats.
Identities = 54/207 (26%), Positives = 85/207 (41%), Gaps = 21/207 (10%)
Query: 34 ITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPI- 92
+T LH A +MV L+ GANI+ +G LH AA G+ + E L+ QGA +
Sbjct: 74 LTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVG 133
Query: 93 ---SSKTKVRGFYILRSGHEAVIEMLLEQGAPI-SSKTKVAAVLLENGASLTST------ 142
S + E + + QG I +++ + ++L + ++
Sbjct: 134 AVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDV 193
Query: 143 --TKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKAPVDDVTVDYLTALHVAAHCGHA 200
K G T LH+ G+ +V KLL+Q V+ + D T LH AAH G
Sbjct: 194 RHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIK--------DYDGWTPLHAAAHWGKE 245
Query: 201 RVAKTLLDKKADPNARALNGFTPLHIA 227
+ L++ D A G T +A
Sbjct: 246 EACRILVENLCDMEAVNKVGQTAFDVA 272
Score = 52.4 bits (124), Expect = 2e-06, Method: Composition-based stats.
Identities = 45/175 (25%), Positives = 73/175 (41%), Gaps = 27/175 (15%)
Query: 989 EQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHI------------------- 1029
E PLH A+ G +DI L+ GA V + + T L I
Sbjct: 105 EGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGV 164
Query: 1030 ---AAKEGQEEV----AAVLLENG-ASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAP 1081
AA++ +E + A L +G + K G T LH+ G+ +V KLL+Q
Sbjct: 165 DIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYD 224
Query: 1082 VDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGF 1136
V+ + +G TPLH A+H+ + +L+E M+ + + E + G+
Sbjct: 225 VNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADEDILGY 279
Score = 45.4 bits (106), Expect = 2e-04, Method: Composition-based stats.
Identities = 51/226 (22%), Positives = 99/226 (43%), Gaps = 18/226 (7%)
Query: 206 LLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNR 265
LL++ AD N ++G T LH AC + + +V+ L+++GA+I LH A
Sbjct: 59 LLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGY 118
Query: 266 IKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVE-LLLKHGASIEATTEVREPMLH 324
+ + E L+ GA + A + L IA ++ ++++ + + G IEA + E ++
Sbjct: 119 LDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIM- 177
Query: 325 IACKKNRIKVVELLLKHGASIEATTEVREP-----MLHIACKKNRIKVVELLLKHGASIE 379
++ L G +VR LH+A K +V++LL++ +
Sbjct: 178 -------LRDARQWLNSG----HINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVN 226
Query: 380 ATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 425
LH A + + +L+++ +EA +V + +A
Sbjct: 227 IKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVA 272
Score = 42.4 bits (98), Expect = 0.002, Method: Composition-based stats.
Identities = 57/246 (23%), Positives = 102/246 (41%), Gaps = 32/246 (13%)
Query: 123 SSKTKVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPV---DFQGKAP 179
S T+ LLE GA + G T LH ++ + K L++ A + D +G P
Sbjct: 50 SGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIP 109
Query: 180 VDDVTVDYLTALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVE-L 238
LH AA CG+ +A+ L+ + A A G TPL IA ++ ++++
Sbjct: 110 -----------LHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNE 158
Query: 239 LLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREP-----MLHIA 293
+ + G IEA + E ++ ++ L G +VR LH+A
Sbjct: 159 VNRQGVDIEAARKEEERIM--------LRDARQWLNSG----HINDVRHAKSGGTALHVA 206
Query: 294 CKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVRE 353
K +V++LL++ + LH A + + +L+++ +EA +V +
Sbjct: 207 AAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQ 266
Query: 354 PMLHIA 359
+A
Sbjct: 267 TAFDVA 272
Score = 39.7 bits (91), Expect = 0.010, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 35/70 (50%)
Query: 29 HFQHNITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQ 88
H + T LHVAA G ++ LL+ +++ K DG T LH AA G E +L+E
Sbjct: 195 HAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVEN 254
Query: 89 GAPISSKTKV 98
+ + KV
Sbjct: 255 LCDMEAVNKV 264
Score = 39.7 bits (91), Expect = 0.011, Method: Composition-based stats.
Identities = 50/221 (22%), Positives = 94/221 (42%), Gaps = 18/221 (8%)
Query: 178 APVDDVTVDYLTALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVE 237
A ++ VD LTALH A + + K L++ A+ N G+ PLH A + + E
Sbjct: 64 ADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAE 123
Query: 238 LLLKHGASIEATTEVREPMLHIACKKNRIKVVE-LLLKHGASIEATTEVREPMLHIACKK 296
L+ GA + A + L IA ++ ++++ + + G IEA + E ++
Sbjct: 124 YLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIM------ 177
Query: 297 NRIKVVELLLKHGASIEATTEVREP-----MLHIACKKNRIKVVELLLKHGASIEATTEV 351
++ L G +VR LH+A K +V++LL++ +
Sbjct: 178 --LRDARQWLNSG----HINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYD 231
Query: 352 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 392
LH A + + +L+++ +EA +V + +A
Sbjct: 232 GWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVA 272
Score = 38.9 bits (89), Expect = 0.023, Method: Composition-based stats.
Identities = 52/238 (21%), Positives = 98/238 (41%), Gaps = 18/238 (7%)
Query: 359 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 418
AC + V LL+ GA I LH AC + + +V+ L+++GA+I
Sbjct: 47 ACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEG 106
Query: 419 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVE-LLLKHGASI 477
LH A + + E L+ GA + A + L IA ++ ++++ + + G I
Sbjct: 107 WIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDI 166
Query: 478 EATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREP-----MLHIACKKNRIKV 532
EA + E ++ ++ L G +VR LH+A K +V
Sbjct: 167 EAARKEEERIM--------LRDARQWLNSG----HINDVRHAKSGGTALHVAAAKGYTEV 214
Query: 533 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 590
++LL++ + LH A + + +L+++ +EA +V + +A
Sbjct: 215 LKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVA 272
Score = 38.9 bits (89), Expect = 0.023, Method: Composition-based stats.
Identities = 52/238 (21%), Positives = 98/238 (41%), Gaps = 18/238 (7%)
Query: 524 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 583
AC + V LL+ GA I LH AC + + +V+ L+++GA+I
Sbjct: 47 ACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEG 106
Query: 584 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVE-LLLKHGASI 642
LH A + + E L+ GA + A + L IA ++ ++++ + + G I
Sbjct: 107 WIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDI 166
Query: 643 EATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREP-----MLHIACKKNRIKV 697
EA + E ++ ++ L G +VR LH+A K +V
Sbjct: 167 EAARKEEERIM--------LRDARQWLNSG----HINDVRHAKSGGTALHVAAAKGYTEV 214
Query: 698 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 755
++LL++ + LH A + + +L+++ +EA +V + +A
Sbjct: 215 LKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVA 272
Score = 38.9 bits (89), Expect = 0.023, Method: Composition-based stats.
Identities = 52/238 (21%), Positives = 98/238 (41%), Gaps = 18/238 (7%)
Query: 689 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 748
AC + V LL+ GA I LH AC + + +V+ L+++GA+I
Sbjct: 47 ACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEG 106
Query: 749 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVE-LLLKHGASI 807
LH A + + E L+ GA + A + L IA ++ ++++ + + G I
Sbjct: 107 WIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDI 166
Query: 808 EATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREP-----MLHIACKKNRIKV 862
EA + E ++ ++ L G +VR LH+A K +V
Sbjct: 167 EAARKEEERIM--------LRDARQWLNSG----HINDVRHAKSGGTALHVAAAKGYTEV 214
Query: 863 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 920
++LL++ + LH A + + +L+++ +EA +V + +A
Sbjct: 215 LKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVA 272
>pdb|2L6B|A Chain A, Nrc Consensus Ankyrin Repeat Protein Solution Structure
Length = 115
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 56/97 (57%)
Query: 1020 TKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKD 1079
+KD T LH AAK G E LL GA + + +K G TPLHL K GH ++ KLLL K
Sbjct: 6 SKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKG 65
Query: 1080 APVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMD 1116
A V+ + K+G TP H+A H + LL KGA ++
Sbjct: 66 ADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVN 102
Score = 75.1 bits (183), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 60/98 (61%)
Query: 988 REQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGA 1047
++ TPLH A++ G+ + V LL GA V++ +KD T LH+AAK G E+ +LL GA
Sbjct: 7 KDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGA 66
Query: 1048 SLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQ 1085
+ + +K G TP HL K GH ++ KLL K A V+ +
Sbjct: 67 DVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNAR 104
Score = 73.9 bits (180), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 59/100 (59%), Gaps = 1/100 (1%)
Query: 1286 ATNKGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLD 1345
+ G TPLH++A+ GH+ V LL +GA NA +K G TPLH+A G + +LLL
Sbjct: 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKD-GNTPLHLAAKNGHAEIVKLLLA 63
Query: 1346 QSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNA 1385
+ A+V+ + G TP H + + GH IV LL +GA NA
Sbjct: 64 KGADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNA 103
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 62/99 (62%), Gaps = 2/99 (2%)
Query: 1257 QGFTPLHHSAQQGHSTIVALLLDRGASPNATNK-GFTPLHHSAQQGHSTIVALLLDRGAS 1315
G TPLH++A+ GH+ V LL +GA NA +K G TPLH +A+ GH+ IV LLL +GA
Sbjct: 8 DGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGAD 67
Query: 1316 PNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTT 1354
NA +K G TP H+A G + +LL + A+V+ +
Sbjct: 68 VNARSKD-GNTPEHLAKKNGHHEIVKLLDAKGADVNARS 105
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 60/108 (55%), Gaps = 8/108 (7%)
Query: 143 TKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKAPVDDVTVDYLTALHVAAHCGHARV 202
+K G TPLH K GH + K LL K A V+ + K D T LH+AA GHA +
Sbjct: 6 SKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSK--------DGNTPLHLAAKNGHAEI 57
Query: 203 AKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATT 250
K LL K AD NAR+ +G TP H+A K ++V+LL GA + A +
Sbjct: 58 VKLLLAKGADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARS 105
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 56/98 (57%)
Query: 186 DYLTALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGAS 245
D T LH AA GHA K LL K AD NAR+ +G TPLH+A K ++V+LLL GA
Sbjct: 8 DGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGAD 67
Query: 246 IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 283
+ A ++ H+A K ++V+LL GA + A +
Sbjct: 68 VNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARS 105
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 65/95 (68%), Gaps = 3/95 (3%)
Query: 35 TPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISS 94
TPLH AAK G A V LLS+GA+++ +++DG T LH AA++GH ++++LL +GA +++
Sbjct: 11 TPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNA 70
Query: 95 KTKVRG---FYILRSGHEAVIEMLLEQGAPISSKT 126
++K ++GH ++++L +GA +++++
Sbjct: 71 RSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARS 105
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 55/98 (56%)
Query: 1132 SVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNN 1191
S G TPLH +A GHA+ LL GADV+ +K+G TPLHL A+ + +LLL
Sbjct: 6 SKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKG 65
Query: 1192 AQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTV 1229
A V+ +K G TP H+A G + +LL + A+V
Sbjct: 66 ADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNA 103
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 57/112 (50%), Gaps = 13/112 (11%)
Query: 1084 FQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSA 1143
+ K+G TPLH A+ H LL KGA + NA S G TPLHL+A
Sbjct: 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADV-------------NARSKDGNTPLHLAA 50
Query: 1144 SEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVD 1195
GHA++ +LL GADV+ +K+G TP HL + + +LL A V+
Sbjct: 51 KNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVN 102
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 64/116 (55%), Gaps = 20/116 (17%)
Query: 63 TRDGLTALHCAARSGHEAVIEMLLEQGAPISSKTKVRGFYI---LRSGHEAVIEMLLEQG 119
++DG T LH AA++GH ++ LL +GA +++++K + ++GH ++++LL +G
Sbjct: 6 SKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKG 65
Query: 120 APISSKTKVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQ 175
A ++++ +K G TP HL K GH ++ KLL K A V+ +
Sbjct: 66 ADVNAR-----------------SKDGNTPEHLAKKNGHHEIVKLLDAKGADVNAR 104
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 52/98 (53%)
Query: 219 NGFTPLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGAS 278
+G TPLH A K + V+ LL GA + A ++ LH+A K ++V+LLL GA
Sbjct: 8 DGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGAD 67
Query: 279 IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 316
+ A ++ H+A K ++V+LL GA + A +
Sbjct: 68 VNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARS 105
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 46/87 (52%), Gaps = 8/87 (9%)
Query: 132 LLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKAPVDDVTVDYLTAL 191
LL GA + + +K G TPLHL K GH ++ KLLL K A V+ + K D T
Sbjct: 28 LLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSK--------DGNTPE 79
Query: 192 HVAAHCGHARVAKTLLDKKADPNARAL 218
H+A GH + K L K AD NAR+
Sbjct: 80 HLAKKNGHHEIVKLLDAKGADVNARSW 106
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 39/65 (60%)
Query: 1324 GFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGASP 1383
G TPLH A G + LL + A+V+ + G TPLH +A+ GH+ IV LLL +GA
Sbjct: 9 GNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADV 68
Query: 1384 NATNK 1388
NA +K
Sbjct: 69 NARSK 73
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 56/129 (43%), Gaps = 24/129 (18%)
Query: 1164 AAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQ 1223
+K+G TPLH A+ + LL A V+ +K G TPLH+A G + +LLL +
Sbjct: 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAK 64
Query: 1224 SANVTVPKNFPSRXXXXXXXXXXXXXXYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGAS 1283
A+V + G TP H + + GH IV LL +GA
Sbjct: 65 GADVNA------------------------RSKDGNTPEHLAKKNGHHEIVKLLDAKGAD 100
Query: 1284 PNATNKGFT 1292
NA + G +
Sbjct: 101 VNARSWGSS 109
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 43/70 (61%)
Query: 984 NLRVREQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLL 1043
N R ++ TPLH+A++ G+ +IV LLL GA V++ +KD T H+A K G E+ +L
Sbjct: 36 NARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKKNGHHEIVKLLD 95
Query: 1044 ENGASLTSTT 1053
GA + + +
Sbjct: 96 AKGADVNARS 105
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%)
Query: 257 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 316
LH A K + V+ LL GA + A ++ LH+A K ++V+LLL GA + A +
Sbjct: 13 LHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARS 72
Query: 317 EVREPMLHIACKKNRIKVVELLLKHGASIEATT 349
+ H+A K ++V+LL GA + A +
Sbjct: 73 KDGNTPEHLAKKNGHHEIVKLLDAKGADVNARS 105
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%)
Query: 290 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 349
LH A K + V+ LL GA + A ++ LH+A K ++V+LLL GA + A +
Sbjct: 13 LHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARS 72
Query: 350 EVREPMLHIACKKNRIKVVELLLKHGASIEATT 382
+ H+A K ++V+LL GA + A +
Sbjct: 73 KDGNTPEHLAKKNGHHEIVKLLDAKGADVNARS 105
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%)
Query: 323 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 382
LH A K + V+ LL GA + A ++ LH+A K ++V+LLL GA + A +
Sbjct: 13 LHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARS 72
Query: 383 EVREPMLHIACKKNRIKVVELLLKHGASIEATT 415
+ H+A K ++V+LL GA + A +
Sbjct: 73 KDGNTPEHLAKKNGHHEIVKLLDAKGADVNARS 105
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%)
Query: 356 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 415
LH A K + V+ LL GA + A ++ LH+A K ++V+LLL GA + A +
Sbjct: 13 LHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARS 72
Query: 416 EVREPMLHIACKKNRIKVVELLLKHGASIEATT 448
+ H+A K ++V+LL GA + A +
Sbjct: 73 KDGNTPEHLAKKNGHHEIVKLLDAKGADVNARS 105
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%)
Query: 389 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 448
LH A K + V+ LL GA + A ++ LH+A K ++V+LLL GA + A +
Sbjct: 13 LHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARS 72
Query: 449 EVREPMLHIACKKNRIKVVELLLKHGASIEATT 481
+ H+A K ++V+LL GA + A +
Sbjct: 73 KDGNTPEHLAKKNGHHEIVKLLDAKGADVNARS 105
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%)
Query: 422 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 481
LH A K + V+ LL GA + A ++ LH+A K ++V+LLL GA + A +
Sbjct: 13 LHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARS 72
Query: 482 EVREPMLHIACKKNRIKVVELLLKHGASIEATT 514
+ H+A K ++V+LL GA + A +
Sbjct: 73 KDGNTPEHLAKKNGHHEIVKLLDAKGADVNARS 105
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%)
Query: 455 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 514
LH A K + V+ LL GA + A ++ LH+A K ++V+LLL GA + A +
Sbjct: 13 LHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARS 72
Query: 515 EVREPMLHIACKKNRIKVVELLLKHGASIEATT 547
+ H+A K ++V+LL GA + A +
Sbjct: 73 KDGNTPEHLAKKNGHHEIVKLLDAKGADVNARS 105
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%)
Query: 488 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 547
LH A K + V+ LL GA + A ++ LH+A K ++V+LLL GA + A +
Sbjct: 13 LHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARS 72
Query: 548 EVREPMLHIACKKNRIKVVELLLKHGASIEATT 580
+ H+A K ++V+LL GA + A +
Sbjct: 73 KDGNTPEHLAKKNGHHEIVKLLDAKGADVNARS 105
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%)
Query: 521 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 580
LH A K + V+ LL GA + A ++ LH+A K ++V+LLL GA + A +
Sbjct: 13 LHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARS 72
Query: 581 EVREPMLHIACKKNRIKVVELLLKHGASIEATT 613
+ H+A K ++V+LL GA + A +
Sbjct: 73 KDGNTPEHLAKKNGHHEIVKLLDAKGADVNARS 105
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%)
Query: 554 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 613
LH A K + V+ LL GA + A ++ LH+A K ++V+LLL GA + A +
Sbjct: 13 LHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARS 72
Query: 614 EVREPMLHIACKKNRIKVVELLLKHGASIEATT 646
+ H+A K ++V+LL GA + A +
Sbjct: 73 KDGNTPEHLAKKNGHHEIVKLLDAKGADVNARS 105
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%)
Query: 587 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 646
LH A K + V+ LL GA + A ++ LH+A K ++V+LLL GA + A +
Sbjct: 13 LHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARS 72
Query: 647 EVREPMLHIACKKNRIKVVELLLKHGASIEATT 679
+ H+A K ++V+LL GA + A +
Sbjct: 73 KDGNTPEHLAKKNGHHEIVKLLDAKGADVNARS 105
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%)
Query: 620 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 679
LH A K + V+ LL GA + A ++ LH+A K ++V+LLL GA + A +
Sbjct: 13 LHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARS 72
Query: 680 EVREPMLHIACKKNRIKVVELLLKHGASIEATT 712
+ H+A K ++V+LL GA + A +
Sbjct: 73 KDGNTPEHLAKKNGHHEIVKLLDAKGADVNARS 105
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%)
Query: 653 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 712
LH A K + V+ LL GA + A ++ LH+A K ++V+LLL GA + A +
Sbjct: 13 LHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARS 72
Query: 713 EVREPMLHIACKKNRIKVVELLLKHGASIEATT 745
+ H+A K ++V+LL GA + A +
Sbjct: 73 KDGNTPEHLAKKNGHHEIVKLLDAKGADVNARS 105
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%)
Query: 686 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 745
LH A K + V+ LL GA + A ++ LH+A K ++V+LLL GA + A +
Sbjct: 13 LHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARS 72
Query: 746 EVREPMLHIACKKNRIKVVELLLKHGASIEATT 778
+ H+A K ++V+LL GA + A +
Sbjct: 73 KDGNTPEHLAKKNGHHEIVKLLDAKGADVNARS 105
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%)
Query: 719 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 778
LH A K + V+ LL GA + A ++ LH+A K ++V+LLL GA + A +
Sbjct: 13 LHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARS 72
Query: 779 EVREPMLHIACKKNRIKVVELLLKHGASIEATT 811
+ H+A K ++V+LL GA + A +
Sbjct: 73 KDGNTPEHLAKKNGHHEIVKLLDAKGADVNARS 105
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%)
Query: 752 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 811
LH A K + V+ LL GA + A ++ LH+A K ++V+LLL GA + A +
Sbjct: 13 LHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARS 72
Query: 812 EVREPMLHIACKKNRIKVVELLLKHGASIEATT 844
+ H+A K ++V+LL GA + A +
Sbjct: 73 KDGNTPEHLAKKNGHHEIVKLLDAKGADVNARS 105
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%)
Query: 785 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 844
LH A K + V+ LL GA + A ++ LH+A K ++V+LLL GA + A +
Sbjct: 13 LHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARS 72
Query: 845 EVREPMLHIACKKNRIKVVELLLKHGASIEATT 877
+ H+A K ++V+LL GA + A +
Sbjct: 73 KDGNTPEHLAKKNGHHEIVKLLDAKGADVNARS 105
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%)
Query: 818 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 877
LH A K + V+ LL GA + A ++ LH+A K ++V+LLL GA + A +
Sbjct: 13 LHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARS 72
Query: 878 EVREPMLHIACKKNRIKVVELLLKHGASIEATT 910
+ H+A K ++V+LL GA + A +
Sbjct: 73 KDGNTPEHLAKKNGHHEIVKLLDAKGADVNARS 105
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%)
Query: 851 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 910
LH A K + V+ LL GA + A ++ LH+A K ++V+LLL GA + A +
Sbjct: 13 LHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARS 72
Query: 911 EVREPMLHIACKKNRIKVVELLLKHGASSHVVSCYS 946
+ H+A K ++V+LL GA + S S
Sbjct: 73 KDGNTPEHLAKKNGHHEIVKLLDAKGADVNARSWGS 108
Score = 38.5 bits (88), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 54/137 (39%), Gaps = 44/137 (32%)
Query: 884 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASSHVVS 943
LH A K + V+ LL GA + A ++ LH+A K ++V+LLL GA
Sbjct: 13 LHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGA------ 66
Query: 944 CYSNVKVHVSLNKIQDVSSSILRLATCDVLPQCETRLNFSNLRVREQQTPLHIASRLGNV 1003
DV N R ++ TP H+A + G+
Sbjct: 67 ---------------DV-----------------------NARSKDGNTPEHLAKKNGHH 88
Query: 1004 DIVMLLLQHGAAVDSTT 1020
+IV LL GA V++ +
Sbjct: 89 EIVKLLDAKGADVNARS 105
>pdb|1YYH|A Chain A, Crystal Structure Of The Human Notch 1 Ankyrin Domain
pdb|1YYH|B Chain B, Crystal Structure Of The Human Notch 1 Ankyrin Domain
Length = 253
Score = 75.5 bits (184), Expect = 2e-13, Method: Composition-based stats.
Identities = 69/205 (33%), Positives = 92/205 (44%), Gaps = 16/205 (7%)
Query: 1026 ALHIAAKEGQEEVAAVL---LENGASL-TSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAP 1081
L E +E+ AV+ + GASL T + G T LHL +Y AK LL+ A
Sbjct: 23 GLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASAD 82
Query: 1082 VDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHL 1141
+ Q G TPLH A D Q V +L+ A+ D+ +A G TPL L
Sbjct: 83 ANIQDNMGRTPLHAAVSADAQGVFQILIRNRAT-DL-----------DARMHDGTTPLIL 130
Query: 1142 SASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKG 1201
+A M L+ ADV+ G + LH A + V A +LLKN A D +
Sbjct: 131 AARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNRE 190
Query: 1202 FTPLHIACHYGQISMARLLLDQSAN 1226
TPL +A G A++LLD AN
Sbjct: 191 ETPLFLAAREGSYETAKVLLDHFAN 215
Score = 62.4 bits (150), Expect = 2e-09, Method: Composition-based stats.
Identities = 67/248 (27%), Positives = 103/248 (41%), Gaps = 39/248 (15%)
Query: 1082 VDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMD-------IATTLLEYGAKPNAESVA 1134
V+ +G +G TPL +AS LE G S + I+ + + + N
Sbjct: 3 VNVRGPDGFTPLMIASCSGGG------LETGNSEEEEDAPAVISDFIYQGASLHNQTDRT 56
Query: 1135 GFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNA-Q 1193
G T LHL+A +D + LLE AD + G TPLH D GV ++L++N A
Sbjct: 57 GETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATD 116
Query: 1194 VDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRXXXXXXXXXXXXXXYTN 1253
+D G TPL +A M L++ A+V
Sbjct: 117 LDARMHDGTTPLILAARLAVEGMLEDLINSHADVNA------------------------ 152
Query: 1254 TTDQGFTPLHHSAQQGHSTIVALLLDRGASPN-ATNKGFTPLHHSAQQGHSTIVALLLDR 1312
D G + LH +A + +LL GA+ + N+ TPL +A++G +LLD
Sbjct: 153 VDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDH 212
Query: 1313 GASPNATN 1320
A+ + T+
Sbjct: 213 FANRDITD 220
Score = 60.8 bits (146), Expect = 5e-09, Method: Composition-based stats.
Identities = 64/233 (27%), Positives = 110/233 (47%), Gaps = 7/233 (3%)
Query: 146 GFTPLHLTG-KYGHIKVAKLLLQKDAPV---DF--QGKAPVDDVTVDYLTALHVAAHCGH 199
GFTPL + G ++ ++DAP DF QG + + TALH+AA
Sbjct: 10 GFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSR 69
Query: 200 ARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGAS-IEATTEVREPMLH 258
+ AK LL+ AD N + G TPLH A + V ++L+++ A+ ++A L
Sbjct: 70 SDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLI 129
Query: 259 IACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEV 318
+A + ++E L+ A + A ++ + LH A N + +LLK+GA+ +
Sbjct: 130 LAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNR 189
Query: 319 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 371
E L +A ++ + ++LL H A+ + T + IA ++ +V LL
Sbjct: 190 EETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLL 242
Score = 58.9 bits (141), Expect = 2e-08, Method: Composition-based stats.
Identities = 63/227 (27%), Positives = 102/227 (44%), Gaps = 21/227 (9%)
Query: 117 EQGAPISSKTKVAAVLLENGASL-TSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQ 175
E+ AP V + + GASL T + G T LHL +Y AK LL+ A + Q
Sbjct: 32 EEDAP-----AVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQ 86
Query: 176 ---GKAPVDDVTVDYLTALHVAAHCGHARVAKTLLDKKA-DPNARALNGFTPLHIACKKN 231
G+ P LH A V + L+ +A D +AR +G TPL +A +
Sbjct: 87 DNMGRTP-----------LHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLA 135
Query: 232 RIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLH 291
++E L+ A + A ++ + LH A N + +LLK+GA+ + E L
Sbjct: 136 VEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLF 195
Query: 292 IACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 338
+A ++ + ++LL H A+ + T + IA ++ +V LL
Sbjct: 196 LAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLL 242
Score = 56.2 bits (134), Expect = 1e-07, Method: Composition-based stats.
Identities = 69/263 (26%), Positives = 108/263 (41%), Gaps = 39/263 (14%)
Query: 1129 NAESVAGFTPLHLSA----------SEGHADMSAML---LEHGADV-SHAAKNGLTPLHL 1174
N GFTPL +++ SE D A++ + GA + + + G T LHL
Sbjct: 4 NVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHL 63
Query: 1175 CAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFP 1234
A+ R A+ LL+ +A + G TPLH A + ++L+ A +
Sbjct: 64 AARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRAT-----DLD 118
Query: 1235 SRXXXXXXXXXXXXXXYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATNK-GFTP 1293
+R G TPL +A+ ++ L++ A NA + G +
Sbjct: 119 ARMH------------------DGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSA 160
Query: 1294 LHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCT 1353
LH +A + +LL GA+ + N R TPL +A G A++LLD AN T
Sbjct: 161 LHWAAAVNNVDAAVVLLKNGANKDMQN-NREETPLFLAAREGSYETAKVLLDHFANRDIT 219
Query: 1354 TDQGFTPLHHSAQQGHSTIVALL 1376
P + ++ H IV LL
Sbjct: 220 DHMDRLPRDIAQERMHHDIVRLL 242
Score = 53.5 bits (127), Expect = 9e-07, Method: Composition-based stats.
Identities = 56/216 (25%), Positives = 96/216 (44%), Gaps = 13/216 (6%)
Query: 895 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASSHVVSCYSNVKVHVS 953
V+ + GAS+ T+ E LH+A + +R + LL+ A +++ +H +
Sbjct: 38 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAA 97
Query: 954 LN-KIQDVSSSILRLATCDVLPQCETRLNFSNLRVREQQTPLHIASRLGNVDIVMLLLQH 1012
++ Q V ++R D+ + R+ + TPL +A+RL ++ L+
Sbjct: 98 VSADAQGVFQILIRNRATDL-----------DARMHDGTTPLILAARLAVEGMLEDLINS 146
Query: 1013 GAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVA 1072
A V++ +ALH AA + A VLL+NGA+ + TPL L + G + A
Sbjct: 147 HADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETA 206
Query: 1073 KLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLL 1108
K+LL A D P +A H ++ LL
Sbjct: 207 KVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLL 242
Score = 51.6 bits (122), Expect = 3e-06, Method: Composition-based stats.
Identities = 58/241 (24%), Positives = 107/241 (44%), Gaps = 15/241 (6%)
Query: 212 DPNARALNGFTPLHIAC-------------KKNRIKVVELLLKHGASIEATTE-VREPML 257
D N R +GFTPL IA +++ V+ + GAS+ T+ E L
Sbjct: 2 DVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETAL 61
Query: 258 HIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGAS-IEATT 316
H+A + +R + LL+ A + LH A + V ++L+++ A+ ++A
Sbjct: 62 HLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARM 121
Query: 317 EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 376
L +A + ++E L+ A + A ++ + LH A N + +LLK+GA
Sbjct: 122 HDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGA 181
Query: 377 SIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVEL 436
+ + E L +A ++ + ++LL H A+ + T + IA ++ +V L
Sbjct: 182 NKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRL 241
Query: 437 L 437
L
Sbjct: 242 L 242
Score = 50.4 bits (119), Expect = 7e-06, Method: Composition-based stats.
Identities = 72/270 (26%), Positives = 108/270 (40%), Gaps = 53/270 (19%)
Query: 1056 GFTPLHLTG-KYGHIKVAKLLLQKDAPV---DF--QG--------KNGVTPLHVASHYDH 1101
GFTPL + G ++ ++DAP DF QG + G T LH+A+ Y
Sbjct: 10 GFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSR 69
Query: 1102 QNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGA-D 1160
D A LLE A N + G TPLH + S + +L+ + A D
Sbjct: 70 S-------------DAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATD 116
Query: 1161 VSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLL 1220
+ +G TPL L A+ G+ E L+ ++A V+ G + LH A + A +L
Sbjct: 117 LDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVL 176
Query: 1221 LDQSANVTVPKNFPSRXXXXXXXXXXXXXXYTNTTDQGFTPLHHSAQQGHSTIVALLLDR 1280
L AN + N TPL +A++G +LLD
Sbjct: 177 LKNGANKDMQNNREE------------------------TPLFLAAREGSYETAKVLLDH 212
Query: 1281 GASPNATNK-GFTPLHHSAQQGHSTIVALL 1309
A+ + T+ P + ++ H IV LL
Sbjct: 213 FANRDITDHMDRLPRDIAQERMHHDIVRLL 242
Score = 45.8 bits (107), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/137 (29%), Positives = 60/137 (43%), Gaps = 2/137 (1%)
Query: 1253 NTTDQ-GFTPLHHSAQQGHSTIVALLLDRGASPN-ATNKGFTPLHHSAQQGHSTIVALLL 1310
N TD+ G T LH +A+ S LL+ A N N G TPLH + + +L+
Sbjct: 51 NQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILI 110
Query: 1311 DRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHS 1370
A+ G TPL +A M L++ A+V+ D G + LH +A +
Sbjct: 111 RNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNV 170
Query: 1371 TIVALLLDRGASPNATN 1387
+LL GA+ + N
Sbjct: 171 DAAVVLLKNGANKDMQN 187
Score = 43.1 bits (100), Expect = 0.001, Method: Composition-based stats.
Identities = 48/205 (23%), Positives = 93/205 (45%), Gaps = 2/205 (0%)
Query: 301 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 359
V+ + GAS+ T+ E LH+A + +R + LL+ A + LH A
Sbjct: 38 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAA 97
Query: 360 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 418
+ V ++L+++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 98 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 157
Query: 419 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 478
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 158 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 217
Query: 479 ATTEVREPMLHIACKKNRIKVVELL 503
T + IA ++ +V LL
Sbjct: 218 ITDHMDRLPRDIAQERMHHDIVRLL 242
Score = 43.1 bits (100), Expect = 0.001, Method: Composition-based stats.
Identities = 48/205 (23%), Positives = 93/205 (45%), Gaps = 2/205 (0%)
Query: 334 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 392
V+ + GAS+ T+ E LH+A + +R + LL+ A + LH A
Sbjct: 38 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAA 97
Query: 393 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 451
+ V ++L+++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 98 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 157
Query: 452 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 511
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 158 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 217
Query: 512 ATTEVREPMLHIACKKNRIKVVELL 536
T + IA ++ +V LL
Sbjct: 218 ITDHMDRLPRDIAQERMHHDIVRLL 242
Score = 43.1 bits (100), Expect = 0.001, Method: Composition-based stats.
Identities = 48/205 (23%), Positives = 93/205 (45%), Gaps = 2/205 (0%)
Query: 367 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 425
V+ + GAS+ T+ E LH+A + +R + LL+ A + LH A
Sbjct: 38 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAA 97
Query: 426 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 484
+ V ++L+++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 98 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 157
Query: 485 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 544
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 158 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 217
Query: 545 ATTEVREPMLHIACKKNRIKVVELL 569
T + IA ++ +V LL
Sbjct: 218 ITDHMDRLPRDIAQERMHHDIVRLL 242
Score = 43.1 bits (100), Expect = 0.001, Method: Composition-based stats.
Identities = 48/205 (23%), Positives = 93/205 (45%), Gaps = 2/205 (0%)
Query: 400 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 458
V+ + GAS+ T+ E LH+A + +R + LL+ A + LH A
Sbjct: 38 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAA 97
Query: 459 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 517
+ V ++L+++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 98 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 157
Query: 518 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 577
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 158 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 217
Query: 578 ATTEVREPMLHIACKKNRIKVVELL 602
T + IA ++ +V LL
Sbjct: 218 ITDHMDRLPRDIAQERMHHDIVRLL 242
Score = 43.1 bits (100), Expect = 0.001, Method: Composition-based stats.
Identities = 48/205 (23%), Positives = 93/205 (45%), Gaps = 2/205 (0%)
Query: 433 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 491
V+ + GAS+ T+ E LH+A + +R + LL+ A + LH A
Sbjct: 38 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAA 97
Query: 492 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 550
+ V ++L+++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 98 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 157
Query: 551 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 610
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 158 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 217
Query: 611 ATTEVREPMLHIACKKNRIKVVELL 635
T + IA ++ +V LL
Sbjct: 218 ITDHMDRLPRDIAQERMHHDIVRLL 242
Score = 43.1 bits (100), Expect = 0.001, Method: Composition-based stats.
Identities = 48/205 (23%), Positives = 93/205 (45%), Gaps = 2/205 (0%)
Query: 466 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 524
V+ + GAS+ T+ E LH+A + +R + LL+ A + LH A
Sbjct: 38 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAA 97
Query: 525 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 583
+ V ++L+++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 98 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 157
Query: 584 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 643
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 158 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 217
Query: 644 ATTEVREPMLHIACKKNRIKVVELL 668
T + IA ++ +V LL
Sbjct: 218 ITDHMDRLPRDIAQERMHHDIVRLL 242
Score = 43.1 bits (100), Expect = 0.001, Method: Composition-based stats.
Identities = 48/205 (23%), Positives = 93/205 (45%), Gaps = 2/205 (0%)
Query: 499 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 557
V+ + GAS+ T+ E LH+A + +R + LL+ A + LH A
Sbjct: 38 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAA 97
Query: 558 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 616
+ V ++L+++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 98 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 157
Query: 617 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 676
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 158 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 217
Query: 677 ATTEVREPMLHIACKKNRIKVVELL 701
T + IA ++ +V LL
Sbjct: 218 ITDHMDRLPRDIAQERMHHDIVRLL 242
Score = 43.1 bits (100), Expect = 0.001, Method: Composition-based stats.
Identities = 48/205 (23%), Positives = 93/205 (45%), Gaps = 2/205 (0%)
Query: 532 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 590
V+ + GAS+ T+ E LH+A + +R + LL+ A + LH A
Sbjct: 38 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAA 97
Query: 591 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 649
+ V ++L+++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 98 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 157
Query: 650 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 709
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 158 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 217
Query: 710 ATTEVREPMLHIACKKNRIKVVELL 734
T + IA ++ +V LL
Sbjct: 218 ITDHMDRLPRDIAQERMHHDIVRLL 242
Score = 43.1 bits (100), Expect = 0.001, Method: Composition-based stats.
Identities = 48/205 (23%), Positives = 93/205 (45%), Gaps = 2/205 (0%)
Query: 565 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 623
V+ + GAS+ T+ E LH+A + +R + LL+ A + LH A
Sbjct: 38 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAA 97
Query: 624 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 682
+ V ++L+++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 98 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 157
Query: 683 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 742
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 158 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 217
Query: 743 ATTEVREPMLHIACKKNRIKVVELL 767
T + IA ++ +V LL
Sbjct: 218 ITDHMDRLPRDIAQERMHHDIVRLL 242
Score = 43.1 bits (100), Expect = 0.001, Method: Composition-based stats.
Identities = 48/205 (23%), Positives = 93/205 (45%), Gaps = 2/205 (0%)
Query: 598 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 656
V+ + GAS+ T+ E LH+A + +R + LL+ A + LH A
Sbjct: 38 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAA 97
Query: 657 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 715
+ V ++L+++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 98 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 157
Query: 716 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 775
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 158 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 217
Query: 776 ATTEVREPMLHIACKKNRIKVVELL 800
T + IA ++ +V LL
Sbjct: 218 ITDHMDRLPRDIAQERMHHDIVRLL 242
Score = 43.1 bits (100), Expect = 0.001, Method: Composition-based stats.
Identities = 48/205 (23%), Positives = 93/205 (45%), Gaps = 2/205 (0%)
Query: 631 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 689
V+ + GAS+ T+ E LH+A + +R + LL+ A + LH A
Sbjct: 38 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAA 97
Query: 690 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 748
+ V ++L+++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 98 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 157
Query: 749 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 808
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 158 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 217
Query: 809 ATTEVREPMLHIACKKNRIKVVELL 833
T + IA ++ +V LL
Sbjct: 218 ITDHMDRLPRDIAQERMHHDIVRLL 242
Score = 43.1 bits (100), Expect = 0.001, Method: Composition-based stats.
Identities = 48/205 (23%), Positives = 93/205 (45%), Gaps = 2/205 (0%)
Query: 664 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 722
V+ + GAS+ T+ E LH+A + +R + LL+ A + LH A
Sbjct: 38 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAA 97
Query: 723 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 781
+ V ++L+++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 98 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 157
Query: 782 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 841
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 158 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 217
Query: 842 ATTEVREPMLHIACKKNRIKVVELL 866
T + IA ++ +V LL
Sbjct: 218 ITDHMDRLPRDIAQERMHHDIVRLL 242
Score = 43.1 bits (100), Expect = 0.001, Method: Composition-based stats.
Identities = 48/205 (23%), Positives = 93/205 (45%), Gaps = 2/205 (0%)
Query: 697 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 755
V+ + GAS+ T+ E LH+A + +R + LL+ A + LH A
Sbjct: 38 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAA 97
Query: 756 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 814
+ V ++L+++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 98 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 157
Query: 815 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 874
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 158 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 217
Query: 875 ATTEVREPMLHIACKKNRIKVVELL 899
T + IA ++ +V LL
Sbjct: 218 ITDHMDRLPRDIAQERMHHDIVRLL 242
Score = 43.1 bits (100), Expect = 0.001, Method: Composition-based stats.
Identities = 48/205 (23%), Positives = 93/205 (45%), Gaps = 2/205 (0%)
Query: 730 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 788
V+ + GAS+ T+ E LH+A + +R + LL+ A + LH A
Sbjct: 38 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAA 97
Query: 789 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 847
+ V ++L+++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 98 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 157
Query: 848 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 907
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 158 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 217
Query: 908 ATTEVREPMLHIACKKNRIKVVELL 932
T + IA ++ +V LL
Sbjct: 218 ITDHMDRLPRDIAQERMHHDIVRLL 242
Score = 40.8 bits (94), Expect = 0.005, Method: Composition-based stats.
Identities = 42/181 (23%), Positives = 83/181 (45%), Gaps = 2/181 (1%)
Query: 763 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 821
V+ + GAS+ T+ E LH+A + +R + LL+ A + LH A
Sbjct: 38 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAA 97
Query: 822 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 880
+ V ++L+++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 98 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 157
Query: 881 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASSH 940
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+
Sbjct: 158 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 217
Query: 941 V 941
+
Sbjct: 218 I 218
Score = 40.0 bits (92), Expect = 0.009, Method: Composition-based stats.
Identities = 42/161 (26%), Positives = 65/161 (40%), Gaps = 24/161 (14%)
Query: 35 TPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISS 94
T LH+AA++ +++ LL A+ + + G T LH A + + V ++L+ A
Sbjct: 59 TALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLD 118
Query: 95 KTKVRGFYILRSGHEAVIEMLLEQGAPISSKTKVAAV----------------------L 132
G L +E +LE I+S V AV L
Sbjct: 119 ARMHDGTTPLILAARLAVEGMLED--LINSHADVNAVDDLGKSALHWAAAVNNVDAAVVL 176
Query: 133 LENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVD 173
L+NGA+ + TPL L + G + AK+LL A D
Sbjct: 177 LKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 217
Score = 39.3 bits (90), Expect = 0.014, Method: Composition-based stats.
Identities = 36/136 (26%), Positives = 64/136 (47%), Gaps = 1/136 (0%)
Query: 983 SNLRVREQQTPLHIASRLGNVDIVMLLLQHGAA-VDSTTKDLYTALHIAAKEGQEEVAAV 1041
+N++ +TPLH A + +L+++ A +D+ D T L +AA+ E +
Sbjct: 83 ANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLED 142
Query: 1042 LLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDH 1101
L+ + A + + G + LH ++ A +LL+ A D Q TPL +A+
Sbjct: 143 LINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGS 202
Query: 1102 QNVALLLLEKGASMDI 1117
A +LL+ A+ DI
Sbjct: 203 YETAKVLLDHFANRDI 218
Score = 39.3 bits (90), Expect = 0.016, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 13/106 (12%)
Query: 1290 GFTPL-------------HHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQ 1336
GFTPL + ++ +++ + +GAS + G T LH+A Y +
Sbjct: 10 GFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSR 69
Query: 1337 ISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGAS 1382
A+ LL+ SA+ + + G TPLH + + +L+ A+
Sbjct: 70 SDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRAT 115
Score = 39.3 bits (90), Expect = 0.017, Method: Composition-based stats.
Identities = 58/227 (25%), Positives = 100/227 (44%), Gaps = 24/227 (10%)
Query: 48 MVTLLLSRGANIDNKT-RDGLTALHCAARSGHEAVIEMLLEQGAPISSKTKVRGFYILRS 106
+++ + +GA++ N+T R G TALH AAR + LLE A + + + R+
Sbjct: 38 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMG-----RT 92
Query: 107 GHEAVIEMLLEQGAPISSKTKVAAVLLENGAS-LTSTTKKGFTPLHLTGKYGHIKVAKLL 165
A + + V +L+ N A+ L + G TPL L + + + L
Sbjct: 93 PLHAAVS---------ADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDL 143
Query: 166 LQKDAPVDFQGKAPVDDVTVDYLTALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLH 225
+ A V+ VDD+ +ALH AA + A LL A+ + + TPL
Sbjct: 144 INSHADVN-----AVDDLGK---SALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLF 195
Query: 226 IACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 272
+A ++ + ++LL H A+ + T + IA ++ +V LL
Sbjct: 196 LAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLL 242
>pdb|2HE0|A Chain A, Crystal Structure Of A Human Notch1 Ankyrin Domain Mutant
pdb|2HE0|B Chain B, Crystal Structure Of A Human Notch1 Ankyrin Domain Mutant
Length = 253
Score = 74.7 bits (182), Expect = 3e-13, Method: Composition-based stats.
Identities = 69/205 (33%), Positives = 91/205 (44%), Gaps = 16/205 (7%)
Query: 1026 ALHIAAKEGQEEVAAVL---LENGASL-TSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAP 1081
L E +E+ AV+ + GASL T + G T LHL Y AK LL+ A
Sbjct: 23 GLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGATALHLAAAYSRSDAAKRLLEASAD 82
Query: 1082 VDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHL 1141
+ Q G TPLH A D Q V +L+ A+ D+ +A G TPL L
Sbjct: 83 ANIQDNMGRTPLHAAVSADAQGVFQILIRNRAT-DL-----------DARMHDGTTPLIL 130
Query: 1142 SASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKG 1201
+A M L+ ADV+ G + LH A + V A +LLKN A D +
Sbjct: 131 AARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNRE 190
Query: 1202 FTPLHIACHYGQISMARLLLDQSAN 1226
TPL +A G A++LLD AN
Sbjct: 191 ETPLFLAAREGSYETAKVLLDHFAN 215
Score = 63.5 bits (153), Expect = 7e-10, Method: Composition-based stats.
Identities = 67/248 (27%), Positives = 104/248 (41%), Gaps = 39/248 (15%)
Query: 1082 VDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMD-------IATTLLEYGAKPNAESVA 1134
V+ +G +G TPL +AS LE G S + I+ + + + N
Sbjct: 3 VNVRGPDGFTPLMIASCSGGG------LETGNSEEEEDAPAVISDFIYQGASLHNQTDRT 56
Query: 1135 GFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNA-Q 1193
G T LHL+A+ +D + LLE AD + G TPLH D GV ++L++N A
Sbjct: 57 GATALHLAAAYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATD 116
Query: 1194 VDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRXXXXXXXXXXXXXXYTN 1253
+D G TPL +A M L++ A+V
Sbjct: 117 LDARMHDGTTPLILAARLAVEGMLEDLINSHADVNA------------------------ 152
Query: 1254 TTDQGFTPLHHSAQQGHSTIVALLLDRGASPN-ATNKGFTPLHHSAQQGHSTIVALLLDR 1312
D G + LH +A + +LL GA+ + N+ TPL +A++G +LLD
Sbjct: 153 VDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDH 212
Query: 1313 GASPNATN 1320
A+ + T+
Sbjct: 213 FANRDITD 220
Score = 60.8 bits (146), Expect = 5e-09, Method: Composition-based stats.
Identities = 64/233 (27%), Positives = 110/233 (47%), Gaps = 7/233 (3%)
Query: 146 GFTPLHLTG-KYGHIKVAKLLLQKDAPV---DF--QGKAPVDDVTVDYLTALHVAAHCGH 199
GFTPL + G ++ ++DAP DF QG + + TALH+AA
Sbjct: 10 GFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGATALHLAAAYSR 69
Query: 200 ARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGAS-IEATTEVREPMLH 258
+ AK LL+ AD N + G TPLH A + V ++L+++ A+ ++A L
Sbjct: 70 SDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLI 129
Query: 259 IACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEV 318
+A + ++E L+ A + A ++ + LH A N + +LLK+GA+ +
Sbjct: 130 LAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNR 189
Query: 319 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 371
E L +A ++ + ++LL H A+ + T + IA ++ +V LL
Sbjct: 190 EETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLL 242
Score = 58.2 bits (139), Expect = 3e-08, Method: Composition-based stats.
Identities = 63/227 (27%), Positives = 101/227 (44%), Gaps = 21/227 (9%)
Query: 117 EQGAPISSKTKVAAVLLENGASL-TSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQ 175
E+ AP V + + GASL T + G T LHL Y AK LL+ A + Q
Sbjct: 32 EEDAP-----AVISDFIYQGASLHNQTDRTGATALHLAAAYSRSDAAKRLLEASADANIQ 86
Query: 176 ---GKAPVDDVTVDYLTALHVAAHCGHARVAKTLLDKKA-DPNARALNGFTPLHIACKKN 231
G+ P LH A V + L+ +A D +AR +G TPL +A +
Sbjct: 87 DNMGRTP-----------LHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLA 135
Query: 232 RIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLH 291
++E L+ A + A ++ + LH A N + +LLK+GA+ + E L
Sbjct: 136 VEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLF 195
Query: 292 IACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 338
+A ++ + ++LL H A+ + T + IA ++ +V LL
Sbjct: 196 LAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLL 242
Score = 56.2 bits (134), Expect = 1e-07, Method: Composition-based stats.
Identities = 69/263 (26%), Positives = 107/263 (40%), Gaps = 39/263 (14%)
Query: 1129 NAESVAGFTPLHLSA----------SEGHADMSAML---LEHGADV-SHAAKNGLTPLHL 1174
N GFTPL +++ SE D A++ + GA + + + G T LHL
Sbjct: 4 NVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGATALHL 63
Query: 1175 CAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFP 1234
A R A+ LL+ +A + G TPLH A + ++L+ A +
Sbjct: 64 AAAYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRAT-----DLD 118
Query: 1235 SRXXXXXXXXXXXXXXYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATNK-GFTP 1293
+R G TPL +A+ ++ L++ A NA + G +
Sbjct: 119 ARMH------------------DGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSA 160
Query: 1294 LHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCT 1353
LH +A + +LL GA+ + N R TPL +A G A++LLD AN T
Sbjct: 161 LHWAAAVNNVDAAVVLLKNGANKDMQN-NREETPLFLAAREGSYETAKVLLDHFANRDIT 219
Query: 1354 TDQGFTPLHHSAQQGHSTIVALL 1376
P + ++ H IV LL
Sbjct: 220 DHMDRLPRDIAQERMHHDIVRLL 242
Score = 50.8 bits (120), Expect = 5e-06, Method: Composition-based stats.
Identities = 72/270 (26%), Positives = 108/270 (40%), Gaps = 53/270 (19%)
Query: 1056 GFTPLHLTG-KYGHIKVAKLLLQKDAPV---DF--QG--------KNGVTPLHVASHYDH 1101
GFTPL + G ++ ++DAP DF QG + G T LH+A+ Y
Sbjct: 10 GFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGATALHLAAAYSR 69
Query: 1102 QNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGA-D 1160
D A LLE A N + G TPLH + S + +L+ + A D
Sbjct: 70 S-------------DAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATD 116
Query: 1161 VSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLL 1220
+ +G TPL L A+ G+ E L+ ++A V+ G + LH A + A +L
Sbjct: 117 LDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVL 176
Query: 1221 LDQSANVTVPKNFPSRXXXXXXXXXXXXXXYTNTTDQGFTPLHHSAQQGHSTIVALLLDR 1280
L AN + N TPL +A++G +LLD
Sbjct: 177 LKNGANKDMQNNREE------------------------TPLFLAAREGSYETAKVLLDH 212
Query: 1281 GASPNATNK-GFTPLHHSAQQGHSTIVALL 1309
A+ + T+ P + ++ H IV LL
Sbjct: 213 FANRDITDHMDRLPRDIAQERMHHDIVRLL 242
Score = 50.1 bits (118), Expect = 9e-06, Method: Composition-based stats.
Identities = 55/216 (25%), Positives = 94/216 (43%), Gaps = 13/216 (6%)
Query: 895 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASSHVVSCYSNVKVHVS 953
V+ + GAS+ T+ LH+A +R + LL+ A +++ +H +
Sbjct: 38 VISDFIYQGASLHNQTDRTGATALHLAAAYSRSDAAKRLLEASADANIQDNMGRTPLHAA 97
Query: 954 LN-KIQDVSSSILRLATCDVLPQCETRLNFSNLRVREQQTPLHIASRLGNVDIVMLLLQH 1012
++ Q V ++R D+ + R+ + TPL +A+RL ++ L+
Sbjct: 98 VSADAQGVFQILIRNRATDL-----------DARMHDGTTPLILAARLAVEGMLEDLINS 146
Query: 1013 GAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVA 1072
A V++ +ALH AA + A VLL+NGA+ + TPL L + G + A
Sbjct: 147 HADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETA 206
Query: 1073 KLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLL 1108
K+LL A D P +A H ++ LL
Sbjct: 207 KVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLL 242
Score = 48.1 bits (113), Expect = 3e-05, Method: Composition-based stats.
Identities = 57/241 (23%), Positives = 105/241 (43%), Gaps = 15/241 (6%)
Query: 212 DPNARALNGFTPLHIAC-------------KKNRIKVVELLLKHGASIEATTE-VREPML 257
D N R +GFTPL IA +++ V+ + GAS+ T+ L
Sbjct: 2 DVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGATAL 61
Query: 258 HIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGAS-IEATT 316
H+A +R + LL+ A + LH A + V ++L+++ A+ ++A
Sbjct: 62 HLAAAYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARM 121
Query: 317 EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 376
L +A + ++E L+ A + A ++ + LH A N + +LLK+GA
Sbjct: 122 HDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGA 181
Query: 377 SIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVEL 436
+ + E L +A ++ + ++LL H A+ + T + IA ++ +V L
Sbjct: 182 NKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRL 241
Query: 437 L 437
L
Sbjct: 242 L 242
Score = 45.4 bits (106), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/137 (29%), Positives = 59/137 (43%), Gaps = 2/137 (1%)
Query: 1253 NTTDQ-GFTPLHHSAQQGHSTIVALLLDRGASPN-ATNKGFTPLHHSAQQGHSTIVALLL 1310
N TD+ G T LH +A S LL+ A N N G TPLH + + +L+
Sbjct: 51 NQTDRTGATALHLAAAYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILI 110
Query: 1311 DRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHS 1370
A+ G TPL +A M L++ A+V+ D G + LH +A +
Sbjct: 111 RNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNV 170
Query: 1371 TIVALLLDRGASPNATN 1387
+LL GA+ + N
Sbjct: 171 DAAVVLLKNGANKDMQN 187
Score = 39.7 bits (91), Expect = 0.012, Method: Composition-based stats.
Identities = 47/205 (22%), Positives = 91/205 (44%), Gaps = 2/205 (0%)
Query: 301 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 359
V+ + GAS+ T+ LH+A +R + LL+ A + LH A
Sbjct: 38 VISDFIYQGASLHNQTDRTGATALHLAAAYSRSDAAKRLLEASADANIQDNMGRTPLHAA 97
Query: 360 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 418
+ V ++L+++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 98 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 157
Query: 419 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 478
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 158 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 217
Query: 479 ATTEVREPMLHIACKKNRIKVVELL 503
T + IA ++ +V LL
Sbjct: 218 ITDHMDRLPRDIAQERMHHDIVRLL 242
Score = 39.7 bits (91), Expect = 0.012, Method: Composition-based stats.
Identities = 47/205 (22%), Positives = 91/205 (44%), Gaps = 2/205 (0%)
Query: 334 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 392
V+ + GAS+ T+ LH+A +R + LL+ A + LH A
Sbjct: 38 VISDFIYQGASLHNQTDRTGATALHLAAAYSRSDAAKRLLEASADANIQDNMGRTPLHAA 97
Query: 393 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 451
+ V ++L+++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 98 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 157
Query: 452 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 511
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 158 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 217
Query: 512 ATTEVREPMLHIACKKNRIKVVELL 536
T + IA ++ +V LL
Sbjct: 218 ITDHMDRLPRDIAQERMHHDIVRLL 242
Score = 39.7 bits (91), Expect = 0.012, Method: Composition-based stats.
Identities = 47/205 (22%), Positives = 91/205 (44%), Gaps = 2/205 (0%)
Query: 367 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 425
V+ + GAS+ T+ LH+A +R + LL+ A + LH A
Sbjct: 38 VISDFIYQGASLHNQTDRTGATALHLAAAYSRSDAAKRLLEASADANIQDNMGRTPLHAA 97
Query: 426 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 484
+ V ++L+++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 98 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 157
Query: 485 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 544
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 158 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 217
Query: 545 ATTEVREPMLHIACKKNRIKVVELL 569
T + IA ++ +V LL
Sbjct: 218 ITDHMDRLPRDIAQERMHHDIVRLL 242
Score = 39.7 bits (91), Expect = 0.012, Method: Composition-based stats.
Identities = 47/205 (22%), Positives = 91/205 (44%), Gaps = 2/205 (0%)
Query: 400 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 458
V+ + GAS+ T+ LH+A +R + LL+ A + LH A
Sbjct: 38 VISDFIYQGASLHNQTDRTGATALHLAAAYSRSDAAKRLLEASADANIQDNMGRTPLHAA 97
Query: 459 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 517
+ V ++L+++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 98 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 157
Query: 518 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 577
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 158 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 217
Query: 578 ATTEVREPMLHIACKKNRIKVVELL 602
T + IA ++ +V LL
Sbjct: 218 ITDHMDRLPRDIAQERMHHDIVRLL 242
Score = 39.7 bits (91), Expect = 0.012, Method: Composition-based stats.
Identities = 47/205 (22%), Positives = 91/205 (44%), Gaps = 2/205 (0%)
Query: 433 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 491
V+ + GAS+ T+ LH+A +R + LL+ A + LH A
Sbjct: 38 VISDFIYQGASLHNQTDRTGATALHLAAAYSRSDAAKRLLEASADANIQDNMGRTPLHAA 97
Query: 492 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 550
+ V ++L+++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 98 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 157
Query: 551 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 610
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 158 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 217
Query: 611 ATTEVREPMLHIACKKNRIKVVELL 635
T + IA ++ +V LL
Sbjct: 218 ITDHMDRLPRDIAQERMHHDIVRLL 242
Score = 39.7 bits (91), Expect = 0.012, Method: Composition-based stats.
Identities = 47/205 (22%), Positives = 91/205 (44%), Gaps = 2/205 (0%)
Query: 466 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 524
V+ + GAS+ T+ LH+A +R + LL+ A + LH A
Sbjct: 38 VISDFIYQGASLHNQTDRTGATALHLAAAYSRSDAAKRLLEASADANIQDNMGRTPLHAA 97
Query: 525 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 583
+ V ++L+++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 98 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 157
Query: 584 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 643
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 158 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 217
Query: 644 ATTEVREPMLHIACKKNRIKVVELL 668
T + IA ++ +V LL
Sbjct: 218 ITDHMDRLPRDIAQERMHHDIVRLL 242
Score = 39.7 bits (91), Expect = 0.012, Method: Composition-based stats.
Identities = 47/205 (22%), Positives = 91/205 (44%), Gaps = 2/205 (0%)
Query: 499 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 557
V+ + GAS+ T+ LH+A +R + LL+ A + LH A
Sbjct: 38 VISDFIYQGASLHNQTDRTGATALHLAAAYSRSDAAKRLLEASADANIQDNMGRTPLHAA 97
Query: 558 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 616
+ V ++L+++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 98 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 157
Query: 617 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 676
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 158 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 217
Query: 677 ATTEVREPMLHIACKKNRIKVVELL 701
T + IA ++ +V LL
Sbjct: 218 ITDHMDRLPRDIAQERMHHDIVRLL 242
Score = 39.7 bits (91), Expect = 0.012, Method: Composition-based stats.
Identities = 47/205 (22%), Positives = 91/205 (44%), Gaps = 2/205 (0%)
Query: 532 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 590
V+ + GAS+ T+ LH+A +R + LL+ A + LH A
Sbjct: 38 VISDFIYQGASLHNQTDRTGATALHLAAAYSRSDAAKRLLEASADANIQDNMGRTPLHAA 97
Query: 591 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 649
+ V ++L+++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 98 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 157
Query: 650 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 709
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 158 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 217
Query: 710 ATTEVREPMLHIACKKNRIKVVELL 734
T + IA ++ +V LL
Sbjct: 218 ITDHMDRLPRDIAQERMHHDIVRLL 242
Score = 39.7 bits (91), Expect = 0.012, Method: Composition-based stats.
Identities = 47/205 (22%), Positives = 91/205 (44%), Gaps = 2/205 (0%)
Query: 565 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 623
V+ + GAS+ T+ LH+A +R + LL+ A + LH A
Sbjct: 38 VISDFIYQGASLHNQTDRTGATALHLAAAYSRSDAAKRLLEASADANIQDNMGRTPLHAA 97
Query: 624 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 682
+ V ++L+++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 98 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 157
Query: 683 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 742
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 158 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 217
Query: 743 ATTEVREPMLHIACKKNRIKVVELL 767
T + IA ++ +V LL
Sbjct: 218 ITDHMDRLPRDIAQERMHHDIVRLL 242
Score = 39.7 bits (91), Expect = 0.012, Method: Composition-based stats.
Identities = 47/205 (22%), Positives = 91/205 (44%), Gaps = 2/205 (0%)
Query: 598 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 656
V+ + GAS+ T+ LH+A +R + LL+ A + LH A
Sbjct: 38 VISDFIYQGASLHNQTDRTGATALHLAAAYSRSDAAKRLLEASADANIQDNMGRTPLHAA 97
Query: 657 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 715
+ V ++L+++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 98 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 157
Query: 716 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 775
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 158 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 217
Query: 776 ATTEVREPMLHIACKKNRIKVVELL 800
T + IA ++ +V LL
Sbjct: 218 ITDHMDRLPRDIAQERMHHDIVRLL 242
Score = 39.7 bits (91), Expect = 0.012, Method: Composition-based stats.
Identities = 47/205 (22%), Positives = 91/205 (44%), Gaps = 2/205 (0%)
Query: 631 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 689
V+ + GAS+ T+ LH+A +R + LL+ A + LH A
Sbjct: 38 VISDFIYQGASLHNQTDRTGATALHLAAAYSRSDAAKRLLEASADANIQDNMGRTPLHAA 97
Query: 690 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 748
+ V ++L+++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 98 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 157
Query: 749 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 808
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 158 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 217
Query: 809 ATTEVREPMLHIACKKNRIKVVELL 833
T + IA ++ +V LL
Sbjct: 218 ITDHMDRLPRDIAQERMHHDIVRLL 242
Score = 39.7 bits (91), Expect = 0.012, Method: Composition-based stats.
Identities = 47/205 (22%), Positives = 91/205 (44%), Gaps = 2/205 (0%)
Query: 664 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 722
V+ + GAS+ T+ LH+A +R + LL+ A + LH A
Sbjct: 38 VISDFIYQGASLHNQTDRTGATALHLAAAYSRSDAAKRLLEASADANIQDNMGRTPLHAA 97
Query: 723 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 781
+ V ++L+++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 98 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 157
Query: 782 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 841
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 158 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 217
Query: 842 ATTEVREPMLHIACKKNRIKVVELL 866
T + IA ++ +V LL
Sbjct: 218 ITDHMDRLPRDIAQERMHHDIVRLL 242
Score = 39.7 bits (91), Expect = 0.012, Method: Composition-based stats.
Identities = 47/205 (22%), Positives = 91/205 (44%), Gaps = 2/205 (0%)
Query: 697 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 755
V+ + GAS+ T+ LH+A +R + LL+ A + LH A
Sbjct: 38 VISDFIYQGASLHNQTDRTGATALHLAAAYSRSDAAKRLLEASADANIQDNMGRTPLHAA 97
Query: 756 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 814
+ V ++L+++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 98 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 157
Query: 815 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 874
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 158 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 217
Query: 875 ATTEVREPMLHIACKKNRIKVVELL 899
T + IA ++ +V LL
Sbjct: 218 ITDHMDRLPRDIAQERMHHDIVRLL 242
Score = 39.7 bits (91), Expect = 0.012, Method: Composition-based stats.
Identities = 47/205 (22%), Positives = 91/205 (44%), Gaps = 2/205 (0%)
Query: 730 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 788
V+ + GAS+ T+ LH+A +R + LL+ A + LH A
Sbjct: 38 VISDFIYQGASLHNQTDRTGATALHLAAAYSRSDAAKRLLEASADANIQDNMGRTPLHAA 97
Query: 789 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 847
+ V ++L+++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 98 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 157
Query: 848 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 907
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 158 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 217
Query: 908 ATTEVREPMLHIACKKNRIKVVELL 932
T + IA ++ +V LL
Sbjct: 218 ITDHMDRLPRDIAQERMHHDIVRLL 242
Score = 39.3 bits (90), Expect = 0.014, Method: Composition-based stats.
Identities = 36/136 (26%), Positives = 64/136 (47%), Gaps = 1/136 (0%)
Query: 983 SNLRVREQQTPLHIASRLGNVDIVMLLLQHGAA-VDSTTKDLYTALHIAAKEGQEEVAAV 1041
+N++ +TPLH A + +L+++ A +D+ D T L +AA+ E +
Sbjct: 83 ANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLED 142
Query: 1042 LLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDH 1101
L+ + A + + G + LH ++ A +LL+ A D Q TPL +A+
Sbjct: 143 LINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGS 202
Query: 1102 QNVALLLLEKGASMDI 1117
A +LL+ A+ DI
Sbjct: 203 YETAKVLLDHFANRDI 218
Score = 38.9 bits (89), Expect = 0.018, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 13/106 (12%)
Query: 1290 GFTPL-------------HHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQ 1336
GFTPL + ++ +++ + +GAS + G T LH+A Y +
Sbjct: 10 GFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGATALHLAAAYSR 69
Query: 1337 ISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGAS 1382
A+ LL+ SA+ + + G TPLH + + +L+ A+
Sbjct: 70 SDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRAT 115
Score = 38.9 bits (89), Expect = 0.020, Method: Composition-based stats.
Identities = 42/161 (26%), Positives = 64/161 (39%), Gaps = 24/161 (14%)
Query: 35 TPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISS 94
T LH+AA + +++ LL A+ + + G T LH A + + V ++L+ A
Sbjct: 59 TALHLAAAYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLD 118
Query: 95 KTKVRGFYILRSGHEAVIEMLLEQGAPISSKTKVAAV----------------------L 132
G L +E +LE I+S V AV L
Sbjct: 119 ARMHDGTTPLILAARLAVEGMLED--LINSHADVNAVDDLGKSALHWAAAVNNVDAAVVL 176
Query: 133 LENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVD 173
L+NGA+ + TPL L + G + AK+LL A D
Sbjct: 177 LKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 217
Score = 37.4 bits (85), Expect = 0.059, Method: Composition-based stats.
Identities = 41/181 (22%), Positives = 81/181 (44%), Gaps = 2/181 (1%)
Query: 763 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 821
V+ + GAS+ T+ LH+A +R + LL+ A + LH A
Sbjct: 38 VISDFIYQGASLHNQTDRTGATALHLAAAYSRSDAAKRLLEASADANIQDNMGRTPLHAA 97
Query: 822 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 880
+ V ++L+++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 98 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 157
Query: 881 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASSH 940
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+
Sbjct: 158 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 217
Query: 941 V 941
+
Sbjct: 218 I 218
Score = 37.0 bits (84), Expect = 0.076, Method: Composition-based stats.
Identities = 57/227 (25%), Positives = 99/227 (43%), Gaps = 24/227 (10%)
Query: 48 MVTLLLSRGANIDNKT-RDGLTALHCAARSGHEAVIEMLLEQGAPISSKTKVRGFYILRS 106
+++ + +GA++ N+T R G TALH AA + LLE A + + + R+
Sbjct: 38 VISDFIYQGASLHNQTDRTGATALHLAAAYSRSDAAKRLLEASADANIQDNMG-----RT 92
Query: 107 GHEAVIEMLLEQGAPISSKTKVAAVLLENGAS-LTSTTKKGFTPLHLTGKYGHIKVAKLL 165
A + + V +L+ N A+ L + G TPL L + + + L
Sbjct: 93 PLHAAVS---------ADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDL 143
Query: 166 LQKDAPVDFQGKAPVDDVTVDYLTALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLH 225
+ A V+ VDD+ +ALH AA + A LL A+ + + TPL
Sbjct: 144 INSHADVN-----AVDDLGK---SALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLF 195
Query: 226 IACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 272
+A ++ + ++LL H A+ + T + IA ++ +V LL
Sbjct: 196 LAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLL 242
>pdb|2JAB|A Chain A, A Designed Ankyrin Repeat Protein Evolved To Picomolar
Affinity To Her2
pdb|2JAB|B Chain B, A Designed Ankyrin Repeat Protein Evolved To Picomolar
Affinity To Her2
pdb|2JAB|C Chain C, A Designed Ankyrin Repeat Protein Evolved To Picomolar
Affinity To Her2
Length = 136
Score = 73.6 bits (179), Expect = 7e-13, Method: Composition-based stats.
Identities = 43/133 (32%), Positives = 72/133 (54%), Gaps = 13/133 (9%)
Query: 1022 DLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAP 1081
DL L AA+ GQ++ +L+ NGA + + + G TPL+L +GH+++ ++LL+ A
Sbjct: 13 DLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGAD 72
Query: 1082 VDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHL 1141
V+ G TPLH+A+ H ++IA LL++GA NA+ G T +
Sbjct: 73 VNAVDAIGFTPLHLAAFIGH-------------LEIAEVLLKHGADVNAQDKFGKTAFDI 119
Query: 1142 SASEGHADMSAML 1154
S G+ D++ +L
Sbjct: 120 SIGNGNEDLAEIL 132
Score = 71.6 bits (174), Expect = 3e-12, Method: Composition-based stats.
Identities = 40/112 (35%), Positives = 67/112 (59%)
Query: 997 ASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKG 1056
A+R G D V +L+ +GA V++ + T L++A G E+ VLL+NGA + + G
Sbjct: 21 AARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIG 80
Query: 1057 FTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLL 1108
FTPLHL GH+++A++LL+ A V+ Q K G T ++ ++++A +L
Sbjct: 81 FTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEIL 132
Score = 68.9 bits (167), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/115 (36%), Positives = 62/115 (53%)
Query: 1106 LLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAA 1165
LL + D L+ GA NA+ G TPL+L+ + GH ++ +LL++GADV+
Sbjct: 18 LLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVD 77
Query: 1166 KNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLL 1220
G TPLHL A + +AE+LLK+ A V+ K G T I+ G +A +L
Sbjct: 78 AIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEIL 132
Score = 66.6 bits (161), Expect = 8e-11, Method: Composition-based stats.
Identities = 35/92 (38%), Positives = 51/92 (55%)
Query: 1142 SASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKG 1201
+A G D +L+ +GADV+ + GLTPL+L + + E+LLKN A V+ G
Sbjct: 21 AARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIG 80
Query: 1202 FTPLHIACHYGQISMARLLLDQSANVTVPKNF 1233
FTPLH+A G + +A +LL A+V F
Sbjct: 81 FTPLHLAAFIGHLEIAEVLLKHGADVNAQDKF 112
Score = 66.6 bits (161), Expect = 9e-11, Method: Composition-based stats.
Identities = 42/128 (32%), Positives = 67/128 (52%), Gaps = 13/128 (10%)
Query: 1064 GKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLE 1123
+ G ++L+ A V+ + + G+TPL++A+ + H ++I LL+
Sbjct: 22 ARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGH-------------LEIVEVLLK 68
Query: 1124 YGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGV 1183
GA NA GFTPLHL+A GH +++ +LL+HGADV+ K G T + +
Sbjct: 69 NGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDL 128
Query: 1184 AELLLKNN 1191
AE+L K N
Sbjct: 129 AEILQKLN 136
Score = 63.9 bits (154), Expect = 5e-10, Method: Composition-based stats.
Identities = 41/116 (35%), Positives = 60/116 (51%), Gaps = 2/116 (1%)
Query: 1262 LHHSAQQGHSTIVALLLDRGASPNATNK-GFTPLHHSAQQGHSTIVALLLDRGASPNATN 1320
L +A+ G V +L+ GA NA ++ G TPL+ + GH IV +LL GA NA +
Sbjct: 18 LLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVD 77
Query: 1321 KTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALL 1376
GFTPLH+A G + +A +LL A+V+ G T S G+ + +L
Sbjct: 78 AI-GFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEIL 132
Score = 62.8 bits (151), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/114 (31%), Positives = 59/114 (51%)
Query: 194 AAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVR 253
AA G + L+ AD NA+ G TPL++A +++VE+LLK+GA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIG 80
Query: 254 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 307
LH+A +++ E+LLKHGA + A + + I+ + E+L K
Sbjct: 81 FTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQK 134
Score = 61.6 bits (148), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/95 (37%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Query: 1294 LHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCT 1353
L +A+ G V +L+ GA NA ++ G TPL++A +G + + +LL A+V+
Sbjct: 18 LLEAARAGQDDEVRILMANGADVNAKDEY-GLTPLYLATAHGHLEIVEVLLKNGADVNAV 76
Query: 1354 TDQGFTPLHHSAQQGHSTIVALLLDRGASPNATNK 1388
GFTPLH +A GH I +LL GA NA +K
Sbjct: 77 DAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDK 111
Score = 58.9 bits (141), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/111 (33%), Positives = 59/111 (53%), Gaps = 8/111 (7%)
Query: 131 VLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKAPVDDVTVDYLTA 190
+L+ NGA + + + G TPL+L +GH+++ ++LL+ A V+ VD + T
Sbjct: 32 ILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVN-----AVDAIG---FTP 83
Query: 191 LHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLK 241
LH+AA GH +A+ LL AD NA+ G T I+ + E+L K
Sbjct: 84 LHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQK 134
Score = 55.1 bits (131), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 46/87 (52%)
Query: 188 LTALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIE 247
LT L++A GH + + LL AD NA GFTPLH+A +++ E+LLKHGA +
Sbjct: 48 LTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVN 107
Query: 248 ATTEVREPMLHIACKKNRIKVVELLLK 274
A + + I+ + E+L K
Sbjct: 108 AQDKFGKTAFDISIGNGNEDLAEILQK 134
Score = 54.3 bits (129), Expect = 5e-07, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 55/84 (65%)
Query: 992 TPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTS 1051
TPL++A+ G+++IV +LL++GA V++ +T LH+AA G E+A VLL++GA + +
Sbjct: 49 TPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNA 108
Query: 1052 TTKKGFTPLHLTGKYGHIKVAKLL 1075
K G T ++ G+ +A++L
Sbjct: 109 QDKFGKTAFDISIGNGNEDLAEIL 132
Score = 53.9 bits (128), Expect = 6e-07, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 55/105 (52%)
Query: 236 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 295
V +L+ +GA + A E L++A +++VE+LLK+GA + A + LH+A
Sbjct: 30 VRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAF 89
Query: 296 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 340
+++ E+LLKHGA + A + + I+ + E+L K
Sbjct: 90 IGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQK 134
Score = 53.9 bits (128), Expect = 6e-07, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 55/105 (52%)
Query: 269 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 328
V +L+ +GA + A E L++A +++VE+LLK+GA + A + LH+A
Sbjct: 30 VRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAF 89
Query: 329 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 373
+++ E+LLKHGA + A + + I+ + E+L K
Sbjct: 90 IGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQK 134
Score = 53.9 bits (128), Expect = 6e-07, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 55/105 (52%)
Query: 302 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 361
V +L+ +GA + A E L++A +++VE+LLK+GA + A + LH+A
Sbjct: 30 VRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAF 89
Query: 362 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 406
+++ E+LLKHGA + A + + I+ + E+L K
Sbjct: 90 IGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQK 134
Score = 53.9 bits (128), Expect = 6e-07, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 55/105 (52%)
Query: 335 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 394
V +L+ +GA + A E L++A +++VE+LLK+GA + A + LH+A
Sbjct: 30 VRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAF 89
Query: 395 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 439
+++ E+LLKHGA + A + + I+ + E+L K
Sbjct: 90 IGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQK 134
Score = 53.9 bits (128), Expect = 6e-07, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 55/105 (52%)
Query: 368 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 427
V +L+ +GA + A E L++A +++VE+LLK+GA + A + LH+A
Sbjct: 30 VRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAF 89
Query: 428 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 472
+++ E+LLKHGA + A + + I+ + E+L K
Sbjct: 90 IGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQK 134
Score = 53.9 bits (128), Expect = 6e-07, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 55/105 (52%)
Query: 401 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 460
V +L+ +GA + A E L++A +++VE+LLK+GA + A + LH+A
Sbjct: 30 VRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAF 89
Query: 461 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 505
+++ E+LLKHGA + A + + I+ + E+L K
Sbjct: 90 IGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQK 134
Score = 53.9 bits (128), Expect = 6e-07, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 55/105 (52%)
Query: 434 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 493
V +L+ +GA + A E L++A +++VE+LLK+GA + A + LH+A
Sbjct: 30 VRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAF 89
Query: 494 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 538
+++ E+LLKHGA + A + + I+ + E+L K
Sbjct: 90 IGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQK 134
Score = 53.9 bits (128), Expect = 6e-07, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 55/105 (52%)
Query: 467 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 526
V +L+ +GA + A E L++A +++VE+LLK+GA + A + LH+A
Sbjct: 30 VRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAF 89
Query: 527 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 571
+++ E+LLKHGA + A + + I+ + E+L K
Sbjct: 90 IGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQK 134
Score = 53.9 bits (128), Expect = 6e-07, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 55/105 (52%)
Query: 500 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 559
V +L+ +GA + A E L++A +++VE+LLK+GA + A + LH+A
Sbjct: 30 VRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAF 89
Query: 560 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 604
+++ E+LLKHGA + A + + I+ + E+L K
Sbjct: 90 IGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQK 134
Score = 53.9 bits (128), Expect = 6e-07, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 55/105 (52%)
Query: 533 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 592
V +L+ +GA + A E L++A +++VE+LLK+GA + A + LH+A
Sbjct: 30 VRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAF 89
Query: 593 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 637
+++ E+LLKHGA + A + + I+ + E+L K
Sbjct: 90 IGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQK 134
Score = 53.9 bits (128), Expect = 6e-07, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 55/105 (52%)
Query: 566 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 625
V +L+ +GA + A E L++A +++VE+LLK+GA + A + LH+A
Sbjct: 30 VRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAF 89
Query: 626 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 670
+++ E+LLKHGA + A + + I+ + E+L K
Sbjct: 90 IGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQK 134
Score = 53.9 bits (128), Expect = 6e-07, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 55/105 (52%)
Query: 599 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 658
V +L+ +GA + A E L++A +++VE+LLK+GA + A + LH+A
Sbjct: 30 VRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAF 89
Query: 659 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 703
+++ E+LLKHGA + A + + I+ + E+L K
Sbjct: 90 IGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQK 134
Score = 53.9 bits (128), Expect = 6e-07, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 55/105 (52%)
Query: 632 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 691
V +L+ +GA + A E L++A +++VE+LLK+GA + A + LH+A
Sbjct: 30 VRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAF 89
Query: 692 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 736
+++ E+LLKHGA + A + + I+ + E+L K
Sbjct: 90 IGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQK 134
Score = 53.9 bits (128), Expect = 6e-07, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 55/105 (52%)
Query: 665 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 724
V +L+ +GA + A E L++A +++VE+LLK+GA + A + LH+A
Sbjct: 30 VRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAF 89
Query: 725 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 769
+++ E+LLKHGA + A + + I+ + E+L K
Sbjct: 90 IGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQK 134
Score = 53.9 bits (128), Expect = 6e-07, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 55/105 (52%)
Query: 698 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 757
V +L+ +GA + A E L++A +++VE+LLK+GA + A + LH+A
Sbjct: 30 VRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAF 89
Query: 758 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 802
+++ E+LLKHGA + A + + I+ + E+L K
Sbjct: 90 IGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQK 134
Score = 53.9 bits (128), Expect = 6e-07, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 55/105 (52%)
Query: 731 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 790
V +L+ +GA + A E L++A +++VE+LLK+GA + A + LH+A
Sbjct: 30 VRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAF 89
Query: 791 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 835
+++ E+LLKHGA + A + + I+ + E+L K
Sbjct: 90 IGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQK 134
Score = 53.9 bits (128), Expect = 6e-07, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 55/105 (52%)
Query: 764 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 823
V +L+ +GA + A E L++A +++VE+LLK+GA + A + LH+A
Sbjct: 30 VRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAF 89
Query: 824 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 868
+++ E+LLKHGA + A + + I+ + E+L K
Sbjct: 90 IGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQK 134
Score = 53.9 bits (128), Expect = 6e-07, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 55/105 (52%)
Query: 797 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 856
V +L+ +GA + A E L++A +++VE+LLK+GA + A + LH+A
Sbjct: 30 VRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAF 89
Query: 857 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 901
+++ E+LLKHGA + A + + I+ + E+L K
Sbjct: 90 IGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQK 134
Score = 53.9 bits (128), Expect = 6e-07, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 55/105 (52%)
Query: 830 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 889
V +L+ +GA + A E L++A +++VE+LLK+GA + A + LH+A
Sbjct: 30 VRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAF 89
Query: 890 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 934
+++ E+LLKHGA + A + + I+ + E+L K
Sbjct: 90 IGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQK 134
Score = 53.1 bits (126), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 20/108 (18%)
Query: 73 AARSGHEAVIEMLLEQGAPISSKTK--VRGFYILRS-GHEAVIEMLLEQGAPISSKTKVA 129
AAR+G + + +L+ GA +++K + + Y+ + GH ++E
Sbjct: 21 AARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVE---------------- 64
Query: 130 AVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGK 177
VLL+NGA + + GFTPLHL GH+++A++LL+ A V+ Q K
Sbjct: 65 -VLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDK 111
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 56/92 (60%), Gaps = 5/92 (5%)
Query: 40 AAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISSKTKVR 99
AA+ G+ + V +L++ GA+++ K GLT L+ A GH ++E+LL+ GA +++ +
Sbjct: 21 AARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAI- 79
Query: 100 GFYILR----SGHEAVIEMLLEQGAPISSKTK 127
GF L GH + E+LL+ GA ++++ K
Sbjct: 80 GFTPLHLAAFIGHLEIAEVLLKHGADVNAQDK 111
Score = 50.8 bits (120), Expect = 6e-06, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 57/106 (53%), Gaps = 1/106 (0%)
Query: 863 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 922
V +L+ +GA + A E L++A +++VE+LLK+GA + A + LH+A
Sbjct: 30 VRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAF 89
Query: 923 KNRIKVVELLLKHGASSHVVSCYSNVKVHVSL-NKIQDVSSSILRL 967
+++ E+LLKHGA + + +S+ N +D++ + +L
Sbjct: 90 IGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKL 135
Score = 50.4 bits (119), Expect = 6e-06, Method: Composition-based stats.
Identities = 41/136 (30%), Positives = 59/136 (43%), Gaps = 30/136 (22%)
Query: 1176 AQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPS 1235
Q+D V +L+ N A V+ + G TPL++A +G + + +LL A+V
Sbjct: 25 GQDDEV---RILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADV-------- 73
Query: 1236 RXXXXXXXXXXXXXXYTNTTDQ-GFTPLHHSAQQGHSTIVALLLDRGASPNATNK-GFTP 1293
N D GFTPLH +A GH I +LL GA NA +K G T
Sbjct: 74 -----------------NAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTA 116
Query: 1294 LHHSAQQGHSTIVALL 1309
S G+ + +L
Sbjct: 117 FDISIGNGNEDLAEIL 132
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 41/67 (61%)
Query: 31 QHNITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGA 90
++ +TPL++A G +V +LL GA+++ G T LH AA GH + E+LL+ GA
Sbjct: 45 EYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGA 104
Query: 91 PISSKTK 97
++++ K
Sbjct: 105 DVNAQDK 111
>pdb|2QC9|A Chain A, Mouse Notch 1 Ankyrin Repeat Intracellular Domain
pdb|2QC9|B Chain B, Mouse Notch 1 Ankyrin Repeat Intracellular Domain
Length = 210
Score = 73.2 bits (178), Expect = 1e-12, Method: Composition-based stats.
Identities = 67/190 (35%), Positives = 85/190 (44%), Gaps = 13/190 (6%)
Query: 1038 VAAVLLENGASL-TSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVA 1096
V + + GASL T + G T LHL +Y AK LL+ A Q G TPLH A
Sbjct: 3 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADAXIQDNMGRTPLHAA 62
Query: 1097 SHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLE 1156
D Q V +LL A+ D+ +A G TPL L+A M L+
Sbjct: 63 VSADAQGVFQILLRNRAT-DL-----------DARMHDGTTPLILAARLALEGMLEDLIN 110
Query: 1157 HGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISM 1216
ADV+ G + LH A + V A +LLKN A D K TPL +A G
Sbjct: 111 SHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNKEETPLFLAAREGSYET 170
Query: 1217 ARLLLDQSAN 1226
A++LLD AN
Sbjct: 171 AKVLLDHFAN 180
Score = 58.2 bits (139), Expect = 3e-08, Method: Composition-based stats.
Identities = 61/216 (28%), Positives = 97/216 (44%), Gaps = 16/216 (7%)
Query: 128 VAAVLLENGASL-TSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQ---GKAPVDDV 183
V + + GASL T + G T LHL +Y AK LL+ A Q G+ P
Sbjct: 3 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADAXIQDNMGRTP---- 58
Query: 184 TVDYLTALHVAAHCGHARVAKTLLDKKA-DPNARALNGFTPLHIACKKNRIKVVELLLKH 242
LH A V + LL +A D +AR +G TPL +A + ++E L+
Sbjct: 59 -------LHAAVSADAQGVFQILLRNRATDLDARMHDGTTPLILAARLALEGMLEDLINS 111
Query: 243 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 302
A + A ++ + LH A N + +LLK+GA+ + E L +A ++ +
Sbjct: 112 HADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNKEETPLFLAAREGSYETA 171
Query: 303 ELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 338
++LL H A+ + T + IA ++ +V LL
Sbjct: 172 KVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLL 207
Score = 54.7 bits (130), Expect = 4e-07, Method: Composition-based stats.
Identities = 51/184 (27%), Positives = 89/184 (48%), Gaps = 1/184 (0%)
Query: 189 TALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGAS-IE 247
TALH+AA + AK LL+ AD + G TPLH A + V ++LL++ A+ ++
Sbjct: 24 TALHLAARYSRSDAAKRLLEASADAXIQDNMGRTPLHAAVSADAQGVFQILLRNRATDLD 83
Query: 248 ATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 307
A L +A + ++E L+ A + A ++ + LH A N + +LLK
Sbjct: 84 ARMHDGTTPLILAARLALEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLK 143
Query: 308 HGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKV 367
+GA+ + E L +A ++ + ++LL H A+ + T + IA ++ +
Sbjct: 144 NGANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDI 203
Query: 368 VELL 371
V LL
Sbjct: 204 VRLL 207
Score = 54.3 bits (129), Expect = 4e-07, Method: Composition-based stats.
Identities = 59/218 (27%), Positives = 96/218 (44%), Gaps = 13/218 (5%)
Query: 895 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASSHVVSCYSNVKVHVS 953
V+ + GAS+ T+ E LH+A + +R + LL+ A + + +H +
Sbjct: 3 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADAXIQDNMGRTPLHAA 62
Query: 954 LN-KIQDVSSSILRLATCDVLPQCETRLNFSNLRVREQQTPLHIASRLGNVDIVMLLLQH 1012
++ Q V +LR D+ + R+ + TPL +A+RL ++ L+
Sbjct: 63 VSADAQGVFQILLRNRATDL-----------DARMHDGTTPLILAARLALEGMLEDLINS 111
Query: 1013 GAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVA 1072
A V++ +ALH AA + A VLL+NGA+ K TPL L + G + A
Sbjct: 112 HADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNKEETPLFLAAREGSYETA 171
Query: 1073 KLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLE 1110
K+LL A D P +A H ++ LL E
Sbjct: 172 KVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDE 209
Score = 50.1 bits (118), Expect = 9e-06, Method: Composition-based stats.
Identities = 57/212 (26%), Positives = 86/212 (40%), Gaps = 25/212 (11%)
Query: 1166 KNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSA 1225
+ G T LHL A+ R A+ LL+ +A G TPLH A + ++LL A
Sbjct: 20 RTGETALHLAARYSRSDAAKRLLEASADAXIQDNMGRTPLHAAVSADAQGVFQILLRNRA 79
Query: 1226 NVTVPKNFPSRXXXXXXXXXXXXXXYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPN 1285
+ +R G TPL +A+ ++ L++ A N
Sbjct: 80 T-----DLDARMH------------------DGTTPLILAARLALEGMLEDLINSHADVN 116
Query: 1286 ATNK-GFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLL 1344
A + G + LH +A + +LL GA+ + N TPL +A G A++LL
Sbjct: 117 AVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNKEE-TPLFLAAREGSYETAKVLL 175
Query: 1345 DQSANVSCTTDQGFTPLHHSAQQGHSTIVALL 1376
D AN T P + ++ H IV LL
Sbjct: 176 DHFANRDITDHMDRLPRDIAQERMHHDIVRLL 207
Score = 45.8 bits (107), Expect = 2e-04, Method: Composition-based stats.
Identities = 59/225 (26%), Positives = 91/225 (40%), Gaps = 39/225 (17%)
Query: 1087 KNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEG 1146
+ G T LH+A+ Y + A LLE A I + G TPLH + S
Sbjct: 20 RTGETALHLAARYSRSDAAKRLLEASADAXIQDNM-------------GRTPLHAAVSAD 66
Query: 1147 HADMSAMLLEHGA-DVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPL 1205
+ +LL + A D+ +G TPL L A+ G+ E L+ ++A V+ G + L
Sbjct: 67 AQGVFQILLRNRATDLDARMHDGTTPLILAARLALEGMLEDLINSHADVNAVDDLGKSAL 126
Query: 1206 HIACHYGQISMARLLLDQSANVTVPKNFPSRXXXXXXXXXXXXXXYTNTTDQGFTPLHHS 1265
H A + A +LL AN + N + TPL +
Sbjct: 127 HWAAAVNNVDAAVVLLKNGANKDMQNN------------------------KEETPLFLA 162
Query: 1266 AQQGHSTIVALLLDRGASPNATNK-GFTPLHHSAQQGHSTIVALL 1309
A++G +LLD A+ + T+ P + ++ H IV LL
Sbjct: 163 AREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLL 207
Score = 43.9 bits (102), Expect = 7e-04, Method: Composition-based stats.
Identities = 49/205 (23%), Positives = 93/205 (45%), Gaps = 2/205 (0%)
Query: 235 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 293
V+ + GAS+ T+ E LH+A + +R + LL+ A + LH A
Sbjct: 3 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADAXIQDNMGRTPLHAA 62
Query: 294 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 352
+ V ++LL++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 63 VSADAQGVFQILLRNRATDLDARMHDGTTPLILAARLALEGMLEDLINSHADVNAVDDLG 122
Query: 353 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 412
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 123 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANRD 182
Query: 413 ATTEVREPMLHIACKKNRIKVVELL 437
T + IA ++ +V LL
Sbjct: 183 ITDHMDRLPRDIAQERMHHDIVRLL 207
Score = 43.9 bits (102), Expect = 7e-04, Method: Composition-based stats.
Identities = 49/205 (23%), Positives = 93/205 (45%), Gaps = 2/205 (0%)
Query: 268 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 326
V+ + GAS+ T+ E LH+A + +R + LL+ A + LH A
Sbjct: 3 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADAXIQDNMGRTPLHAA 62
Query: 327 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 385
+ V ++LL++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 63 VSADAQGVFQILLRNRATDLDARMHDGTTPLILAARLALEGMLEDLINSHADVNAVDDLG 122
Query: 386 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 445
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 123 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANRD 182
Query: 446 ATTEVREPMLHIACKKNRIKVVELL 470
T + IA ++ +V LL
Sbjct: 183 ITDHMDRLPRDIAQERMHHDIVRLL 207
Score = 43.9 bits (102), Expect = 7e-04, Method: Composition-based stats.
Identities = 49/205 (23%), Positives = 93/205 (45%), Gaps = 2/205 (0%)
Query: 301 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 359
V+ + GAS+ T+ E LH+A + +R + LL+ A + LH A
Sbjct: 3 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADAXIQDNMGRTPLHAA 62
Query: 360 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 418
+ V ++LL++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 63 VSADAQGVFQILLRNRATDLDARMHDGTTPLILAARLALEGMLEDLINSHADVNAVDDLG 122
Query: 419 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 478
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 123 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANRD 182
Query: 479 ATTEVREPMLHIACKKNRIKVVELL 503
T + IA ++ +V LL
Sbjct: 183 ITDHMDRLPRDIAQERMHHDIVRLL 207
Score = 43.9 bits (102), Expect = 7e-04, Method: Composition-based stats.
Identities = 49/205 (23%), Positives = 93/205 (45%), Gaps = 2/205 (0%)
Query: 334 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 392
V+ + GAS+ T+ E LH+A + +R + LL+ A + LH A
Sbjct: 3 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADAXIQDNMGRTPLHAA 62
Query: 393 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 451
+ V ++LL++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 63 VSADAQGVFQILLRNRATDLDARMHDGTTPLILAARLALEGMLEDLINSHADVNAVDDLG 122
Query: 452 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 511
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 123 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANRD 182
Query: 512 ATTEVREPMLHIACKKNRIKVVELL 536
T + IA ++ +V LL
Sbjct: 183 ITDHMDRLPRDIAQERMHHDIVRLL 207
Score = 43.9 bits (102), Expect = 7e-04, Method: Composition-based stats.
Identities = 49/205 (23%), Positives = 93/205 (45%), Gaps = 2/205 (0%)
Query: 367 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 425
V+ + GAS+ T+ E LH+A + +R + LL+ A + LH A
Sbjct: 3 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADAXIQDNMGRTPLHAA 62
Query: 426 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 484
+ V ++LL++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 63 VSADAQGVFQILLRNRATDLDARMHDGTTPLILAARLALEGMLEDLINSHADVNAVDDLG 122
Query: 485 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 544
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 123 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANRD 182
Query: 545 ATTEVREPMLHIACKKNRIKVVELL 569
T + IA ++ +V LL
Sbjct: 183 ITDHMDRLPRDIAQERMHHDIVRLL 207
Score = 43.9 bits (102), Expect = 7e-04, Method: Composition-based stats.
Identities = 49/205 (23%), Positives = 93/205 (45%), Gaps = 2/205 (0%)
Query: 400 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 458
V+ + GAS+ T+ E LH+A + +R + LL+ A + LH A
Sbjct: 3 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADAXIQDNMGRTPLHAA 62
Query: 459 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 517
+ V ++LL++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 63 VSADAQGVFQILLRNRATDLDARMHDGTTPLILAARLALEGMLEDLINSHADVNAVDDLG 122
Query: 518 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 577
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 123 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANRD 182
Query: 578 ATTEVREPMLHIACKKNRIKVVELL 602
T + IA ++ +V LL
Sbjct: 183 ITDHMDRLPRDIAQERMHHDIVRLL 207
Score = 43.9 bits (102), Expect = 7e-04, Method: Composition-based stats.
Identities = 49/205 (23%), Positives = 93/205 (45%), Gaps = 2/205 (0%)
Query: 433 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 491
V+ + GAS+ T+ E LH+A + +R + LL+ A + LH A
Sbjct: 3 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADAXIQDNMGRTPLHAA 62
Query: 492 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 550
+ V ++LL++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 63 VSADAQGVFQILLRNRATDLDARMHDGTTPLILAARLALEGMLEDLINSHADVNAVDDLG 122
Query: 551 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 610
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 123 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANRD 182
Query: 611 ATTEVREPMLHIACKKNRIKVVELL 635
T + IA ++ +V LL
Sbjct: 183 ITDHMDRLPRDIAQERMHHDIVRLL 207
Score = 43.9 bits (102), Expect = 7e-04, Method: Composition-based stats.
Identities = 49/205 (23%), Positives = 93/205 (45%), Gaps = 2/205 (0%)
Query: 466 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 524
V+ + GAS+ T+ E LH+A + +R + LL+ A + LH A
Sbjct: 3 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADAXIQDNMGRTPLHAA 62
Query: 525 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 583
+ V ++LL++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 63 VSADAQGVFQILLRNRATDLDARMHDGTTPLILAARLALEGMLEDLINSHADVNAVDDLG 122
Query: 584 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 643
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 123 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANRD 182
Query: 644 ATTEVREPMLHIACKKNRIKVVELL 668
T + IA ++ +V LL
Sbjct: 183 ITDHMDRLPRDIAQERMHHDIVRLL 207
Score = 43.9 bits (102), Expect = 7e-04, Method: Composition-based stats.
Identities = 49/205 (23%), Positives = 93/205 (45%), Gaps = 2/205 (0%)
Query: 499 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 557
V+ + GAS+ T+ E LH+A + +R + LL+ A + LH A
Sbjct: 3 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADAXIQDNMGRTPLHAA 62
Query: 558 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 616
+ V ++LL++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 63 VSADAQGVFQILLRNRATDLDARMHDGTTPLILAARLALEGMLEDLINSHADVNAVDDLG 122
Query: 617 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 676
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 123 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANRD 182
Query: 677 ATTEVREPMLHIACKKNRIKVVELL 701
T + IA ++ +V LL
Sbjct: 183 ITDHMDRLPRDIAQERMHHDIVRLL 207
Score = 43.9 bits (102), Expect = 7e-04, Method: Composition-based stats.
Identities = 49/205 (23%), Positives = 93/205 (45%), Gaps = 2/205 (0%)
Query: 532 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 590
V+ + GAS+ T+ E LH+A + +R + LL+ A + LH A
Sbjct: 3 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADAXIQDNMGRTPLHAA 62
Query: 591 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 649
+ V ++LL++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 63 VSADAQGVFQILLRNRATDLDARMHDGTTPLILAARLALEGMLEDLINSHADVNAVDDLG 122
Query: 650 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 709
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 123 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANRD 182
Query: 710 ATTEVREPMLHIACKKNRIKVVELL 734
T + IA ++ +V LL
Sbjct: 183 ITDHMDRLPRDIAQERMHHDIVRLL 207
Score = 43.9 bits (102), Expect = 7e-04, Method: Composition-based stats.
Identities = 49/205 (23%), Positives = 93/205 (45%), Gaps = 2/205 (0%)
Query: 565 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 623
V+ + GAS+ T+ E LH+A + +R + LL+ A + LH A
Sbjct: 3 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADAXIQDNMGRTPLHAA 62
Query: 624 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 682
+ V ++LL++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 63 VSADAQGVFQILLRNRATDLDARMHDGTTPLILAARLALEGMLEDLINSHADVNAVDDLG 122
Query: 683 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 742
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 123 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANRD 182
Query: 743 ATTEVREPMLHIACKKNRIKVVELL 767
T + IA ++ +V LL
Sbjct: 183 ITDHMDRLPRDIAQERMHHDIVRLL 207
Score = 43.9 bits (102), Expect = 7e-04, Method: Composition-based stats.
Identities = 49/205 (23%), Positives = 93/205 (45%), Gaps = 2/205 (0%)
Query: 598 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 656
V+ + GAS+ T+ E LH+A + +R + LL+ A + LH A
Sbjct: 3 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADAXIQDNMGRTPLHAA 62
Query: 657 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 715
+ V ++LL++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 63 VSADAQGVFQILLRNRATDLDARMHDGTTPLILAARLALEGMLEDLINSHADVNAVDDLG 122
Query: 716 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 775
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 123 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANRD 182
Query: 776 ATTEVREPMLHIACKKNRIKVVELL 800
T + IA ++ +V LL
Sbjct: 183 ITDHMDRLPRDIAQERMHHDIVRLL 207
Score = 43.9 bits (102), Expect = 7e-04, Method: Composition-based stats.
Identities = 49/205 (23%), Positives = 93/205 (45%), Gaps = 2/205 (0%)
Query: 631 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 689
V+ + GAS+ T+ E LH+A + +R + LL+ A + LH A
Sbjct: 3 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADAXIQDNMGRTPLHAA 62
Query: 690 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 748
+ V ++LL++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 63 VSADAQGVFQILLRNRATDLDARMHDGTTPLILAARLALEGMLEDLINSHADVNAVDDLG 122
Query: 749 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 808
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 123 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANRD 182
Query: 809 ATTEVREPMLHIACKKNRIKVVELL 833
T + IA ++ +V LL
Sbjct: 183 ITDHMDRLPRDIAQERMHHDIVRLL 207
Score = 43.9 bits (102), Expect = 7e-04, Method: Composition-based stats.
Identities = 49/205 (23%), Positives = 93/205 (45%), Gaps = 2/205 (0%)
Query: 664 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 722
V+ + GAS+ T+ E LH+A + +R + LL+ A + LH A
Sbjct: 3 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADAXIQDNMGRTPLHAA 62
Query: 723 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 781
+ V ++LL++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 63 VSADAQGVFQILLRNRATDLDARMHDGTTPLILAARLALEGMLEDLINSHADVNAVDDLG 122
Query: 782 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 841
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 123 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANRD 182
Query: 842 ATTEVREPMLHIACKKNRIKVVELL 866
T + IA ++ +V LL
Sbjct: 183 ITDHMDRLPRDIAQERMHHDIVRLL 207
Score = 43.9 bits (102), Expect = 7e-04, Method: Composition-based stats.
Identities = 49/205 (23%), Positives = 93/205 (45%), Gaps = 2/205 (0%)
Query: 697 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 755
V+ + GAS+ T+ E LH+A + +R + LL+ A + LH A
Sbjct: 3 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADAXIQDNMGRTPLHAA 62
Query: 756 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 814
+ V ++LL++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 63 VSADAQGVFQILLRNRATDLDARMHDGTTPLILAARLALEGMLEDLINSHADVNAVDDLG 122
Query: 815 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 874
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 123 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANRD 182
Query: 875 ATTEVREPMLHIACKKNRIKVVELL 899
T + IA ++ +V LL
Sbjct: 183 ITDHMDRLPRDIAQERMHHDIVRLL 207
Score = 43.9 bits (102), Expect = 7e-04, Method: Composition-based stats.
Identities = 49/205 (23%), Positives = 93/205 (45%), Gaps = 2/205 (0%)
Query: 730 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 788
V+ + GAS+ T+ E LH+A + +R + LL+ A + LH A
Sbjct: 3 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADAXIQDNMGRTPLHAA 62
Query: 789 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 847
+ V ++LL++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 63 VSADAQGVFQILLRNRATDLDARMHDGTTPLILAARLALEGMLEDLINSHADVNAVDDLG 122
Query: 848 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 907
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 123 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANRD 182
Query: 908 ATTEVREPMLHIACKKNRIKVVELL 932
T + IA ++ +V LL
Sbjct: 183 ITDHMDRLPRDIAQERMHHDIVRLL 207
Score = 43.5 bits (101), Expect = 8e-04, Method: Composition-based stats.
Identities = 40/137 (29%), Positives = 59/137 (43%), Gaps = 2/137 (1%)
Query: 1253 NTTDQ-GFTPLHHSAQQGHSTIVALLLDRGASPN-ATNKGFTPLHHSAQQGHSTIVALLL 1310
N TD+ G T LH +A+ S LL+ A N G TPLH + + +LL
Sbjct: 16 NQTDRTGETALHLAARYSRSDAAKRLLEASADAXIQDNMGRTPLHAAVSADAQGVFQILL 75
Query: 1311 DRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHS 1370
A+ G TPL +A M L++ A+V+ D G + LH +A +
Sbjct: 76 RNRATDLDARMHDGTTPLILAARLALEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNV 135
Query: 1371 TIVALLLDRGASPNATN 1387
+LL GA+ + N
Sbjct: 136 DAAVVLLKNGANKDMQN 152
Score = 41.6 bits (96), Expect = 0.003, Method: Composition-based stats.
Identities = 43/181 (23%), Positives = 83/181 (45%), Gaps = 2/181 (1%)
Query: 763 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 821
V+ + GAS+ T+ E LH+A + +R + LL+ A + LH A
Sbjct: 3 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADAXIQDNMGRTPLHAA 62
Query: 822 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 880
+ V ++LL++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 63 VSADAQGVFQILLRNRATDLDARMHDGTTPLILAARLALEGMLEDLINSHADVNAVDDLG 122
Query: 881 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASSH 940
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+
Sbjct: 123 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANRD 182
Query: 941 V 941
+
Sbjct: 183 I 183
Score = 40.0 bits (92), Expect = 0.009, Method: Composition-based stats.
Identities = 44/161 (27%), Positives = 64/161 (39%), Gaps = 24/161 (14%)
Query: 35 TPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISS 94
T LH+AA++ +++ LL A+ + G T LH A + + V ++LL A
Sbjct: 24 TALHLAARYSRSDAAKRLLEASADAXIQDNMGRTPLHAAVSADAQGVFQILLRNRATDLD 83
Query: 95 KTKVRGFYILRSGHEAVIEMLLEQGAPISSKTKVAAV----------------------L 132
G L +E +LE I+S V AV L
Sbjct: 84 ARMHDGTTPLILAARLALEGMLED--LINSHADVNAVDDLGKSALHWAAAVNNVDAAVVL 141
Query: 133 LENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVD 173
L+NGA+ K TPL L + G + AK+LL A D
Sbjct: 142 LKNGANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANRD 182
Score = 39.7 bits (91), Expect = 0.013, Method: Composition-based stats.
Identities = 59/229 (25%), Positives = 100/229 (43%), Gaps = 24/229 (10%)
Query: 46 ANMVTLLLSRGANIDNKT-RDGLTALHCAARSGHEAVIEMLLEQGAPISSKTKVRGFYIL 104
++++ + +GA++ N+T R G TALH AAR + LLE A + +
Sbjct: 1 GSVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADAXIQDNMG----- 55
Query: 105 RSGHEAVIEMLLEQGAPISSKTKVAAVLLENGAS-LTSTTKKGFTPLHLTGKYGHIKVAK 163
R+ A + + V +LL N A+ L + G TPL L + + +
Sbjct: 56 RTPLHAAVS---------ADAQGVFQILLRNRATDLDARMHDGTTPLILAARLALEGMLE 106
Query: 164 LLLQKDAPVDFQGKAPVDDVTVDYLTALHVAAHCGHARVAKTLLDKKADPNARALNGFTP 223
L+ A V+ VDD+ +ALH AA + A LL A+ + + TP
Sbjct: 107 DLINSHADVN-----AVDDLGK---SALHWAAAVNNVDAAVVLLKNGANKDMQNNKEETP 158
Query: 224 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 272
L +A ++ + ++LL H A+ + T + IA ++ +V LL
Sbjct: 159 LFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLL 207
Score = 39.3 bits (90), Expect = 0.014, Method: Composition-based stats.
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 1/128 (0%)
Query: 991 QTPLHIASRLGNVDIVMLLLQHGAA-VDSTTKDLYTALHIAAKEGQEEVAAVLLENGASL 1049
+TPLH A + +LL++ A +D+ D T L +AA+ E + L+ + A +
Sbjct: 56 RTPLHAAVSADAQGVFQILLRNRATDLDARMHDGTTPLILAARLALEGMLEDLINSHADV 115
Query: 1050 TSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLL 1109
+ G + LH ++ A +LL+ A D Q TPL +A+ A +LL
Sbjct: 116 NAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNKEETPLFLAAREGSYETAKVLL 175
Query: 1110 EKGASMDI 1117
+ A+ DI
Sbjct: 176 DHFANRDI 183
Score = 38.9 bits (89), Expect = 0.022, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 39/79 (49%)
Query: 1304 TIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHH 1363
++++ + +GAS + G T LH+A Y + A+ LL+ SA+ + G TPLH
Sbjct: 2 SVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADAXIQDNMGRTPLHA 61
Query: 1364 SAQQGHSTIVALLLDRGAS 1382
+ + +LL A+
Sbjct: 62 AVSADAQGVFQILLRNRAT 80
>pdb|3HG0|D Chain D, Crystal Structure Of A Darpin In Complex With Orf49 From
Lactococcal Phage Tp901-1
Length = 136
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 60/114 (52%)
Query: 194 AAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVR 253
AA G + L+ AD NA G TPLH+A + +++VE+LLK+GA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNAEDKVGLTPLHLAAMNDHLEIVEVLLKNGADVNAIDAIG 80
Query: 254 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 307
E LH+ +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 81 ETPLHLVAMYGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 69/133 (51%), Gaps = 13/133 (9%)
Query: 1022 DLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAP 1081
DL L AA+ GQ++ +L+ NGA + + K G TPLHL H+++ ++LL+ A
Sbjct: 13 DLGKKLLEAARAGQDDEVRILMANGADVNAEDKVGLTPLHLAAMNDHLEIVEVLLKNGAD 72
Query: 1082 VDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHL 1141
V+ G TPLH+ + Y H ++I LL++GA NA+ G T +
Sbjct: 73 VNAIDAIGETPLHLVAMYGH-------------LEIVEVLLKHGADVNAQDKFGKTAFDI 119
Query: 1142 SASEGHADMSAML 1154
S G+ D++ +L
Sbjct: 120 SIDNGNEDLAEIL 132
Score = 70.9 bits (172), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 66/112 (58%)
Query: 997 ASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKG 1056
A+R G D V +L+ +GA V++ K T LH+AA E+ VLL+NGA + + G
Sbjct: 21 AARAGQDDEVRILMANGADVNAEDKVGLTPLHLAAMNDHLEIVEVLLKNGADVNAIDAIG 80
Query: 1057 FTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLL 1108
TPLHL YGH+++ ++LL+ A V+ Q K G T ++ ++++A +L
Sbjct: 81 ETPLHLVAMYGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEIL 132
Score = 70.1 bits (170), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 51/92 (55%)
Query: 1142 SASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKG 1201
+A G D +L+ +GADV+ K GLTPLHL A D + + E+LLKN A V+ G
Sbjct: 21 AARAGQDDEVRILMANGADVNAEDKVGLTPLHLAAMNDHLEIVEVLLKNGADVNAIDAIG 80
Query: 1202 FTPLHIACHYGQISMARLLLDQSANVTVPKNF 1233
TPLH+ YG + + +LL A+V F
Sbjct: 81 ETPLHLVAMYGHLEIVEVLLKHGADVNAQDKF 112
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 56/100 (56%)
Query: 1121 LLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDR 1180
L+ GA NAE G TPLHL+A H ++ +LL++GADV+ G TPLHL A
Sbjct: 33 LMANGADVNAEDKVGLTPLHLAAMNDHLEIVEVLLKNGADVNAIDAIGETPLHLVAMYGH 92
Query: 1181 VGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLL 1220
+ + E+LLK+ A V+ K G T I+ G +A +L
Sbjct: 93 LEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEIL 132
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 58/116 (50%), Gaps = 2/116 (1%)
Query: 1262 LHHSAQQGHSTIVALLLDRGASPNATNK-GFTPLHHSAQQGHSTIVALLLDRGASPNATN 1320
L +A+ G V +L+ GA NA +K G TPLH +A H IV +LL GA NA +
Sbjct: 18 LLEAARAGQDDEVRILMANGADVNAEDKVGLTPLHLAAMNDHLEIVEVLLKNGADVNAID 77
Query: 1321 KTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALL 1376
G TPLH+ YG + + +LL A+V+ G T S G+ + +L
Sbjct: 78 AI-GETPLHLVAMYGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEIL 132
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 61/114 (53%)
Query: 227 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 286
A + + V +L+ +GA + A +V LH+A + +++VE+LLK+GA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNAEDKVGLTPLHLAAMNDHLEIVEVLLKNGADVNAIDAIG 80
Query: 287 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 340
E LH+ +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 81 ETPLHLVAMYGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 61/114 (53%)
Query: 260 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 319
A + + V +L+ +GA + A +V LH+A + +++VE+LLK+GA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNAEDKVGLTPLHLAAMNDHLEIVEVLLKNGADVNAIDAIG 80
Query: 320 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 373
E LH+ +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 81 ETPLHLVAMYGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 61/114 (53%)
Query: 293 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 352
A + + V +L+ +GA + A +V LH+A + +++VE+LLK+GA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNAEDKVGLTPLHLAAMNDHLEIVEVLLKNGADVNAIDAIG 80
Query: 353 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 406
E LH+ +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 81 ETPLHLVAMYGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 61/114 (53%)
Query: 326 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 385
A + + V +L+ +GA + A +V LH+A + +++VE+LLK+GA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNAEDKVGLTPLHLAAMNDHLEIVEVLLKNGADVNAIDAIG 80
Query: 386 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 439
E LH+ +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 81 ETPLHLVAMYGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 61/114 (53%)
Query: 359 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 418
A + + V +L+ +GA + A +V LH+A + +++VE+LLK+GA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNAEDKVGLTPLHLAAMNDHLEIVEVLLKNGADVNAIDAIG 80
Query: 419 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 472
E LH+ +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 81 ETPLHLVAMYGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 61/114 (53%)
Query: 392 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 451
A + + V +L+ +GA + A +V LH+A + +++VE+LLK+GA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNAEDKVGLTPLHLAAMNDHLEIVEVLLKNGADVNAIDAIG 80
Query: 452 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 505
E LH+ +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 81 ETPLHLVAMYGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 61/114 (53%)
Query: 425 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 484
A + + V +L+ +GA + A +V LH+A + +++VE+LLK+GA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNAEDKVGLTPLHLAAMNDHLEIVEVLLKNGADVNAIDAIG 80
Query: 485 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 538
E LH+ +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 81 ETPLHLVAMYGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 61/114 (53%)
Query: 458 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 517
A + + V +L+ +GA + A +V LH+A + +++VE+LLK+GA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNAEDKVGLTPLHLAAMNDHLEIVEVLLKNGADVNAIDAIG 80
Query: 518 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 571
E LH+ +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 81 ETPLHLVAMYGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 61/114 (53%)
Query: 491 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 550
A + + V +L+ +GA + A +V LH+A + +++VE+LLK+GA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNAEDKVGLTPLHLAAMNDHLEIVEVLLKNGADVNAIDAIG 80
Query: 551 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 604
E LH+ +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 81 ETPLHLVAMYGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 61/114 (53%)
Query: 524 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 583
A + + V +L+ +GA + A +V LH+A + +++VE+LLK+GA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNAEDKVGLTPLHLAAMNDHLEIVEVLLKNGADVNAIDAIG 80
Query: 584 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 637
E LH+ +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 81 ETPLHLVAMYGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 61/114 (53%)
Query: 557 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 616
A + + V +L+ +GA + A +V LH+A + +++VE+LLK+GA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNAEDKVGLTPLHLAAMNDHLEIVEVLLKNGADVNAIDAIG 80
Query: 617 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 670
E LH+ +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 81 ETPLHLVAMYGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 61/114 (53%)
Query: 590 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 649
A + + V +L+ +GA + A +V LH+A + +++VE+LLK+GA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNAEDKVGLTPLHLAAMNDHLEIVEVLLKNGADVNAIDAIG 80
Query: 650 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 703
E LH+ +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 81 ETPLHLVAMYGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 61/114 (53%)
Query: 623 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 682
A + + V +L+ +GA + A +V LH+A + +++VE+LLK+GA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNAEDKVGLTPLHLAAMNDHLEIVEVLLKNGADVNAIDAIG 80
Query: 683 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 736
E LH+ +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 81 ETPLHLVAMYGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 61/114 (53%)
Query: 656 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 715
A + + V +L+ +GA + A +V LH+A + +++VE+LLK+GA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNAEDKVGLTPLHLAAMNDHLEIVEVLLKNGADVNAIDAIG 80
Query: 716 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 769
E LH+ +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 81 ETPLHLVAMYGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 61/114 (53%)
Query: 689 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 748
A + + V +L+ +GA + A +V LH+A + +++VE+LLK+GA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNAEDKVGLTPLHLAAMNDHLEIVEVLLKNGADVNAIDAIG 80
Query: 749 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 802
E LH+ +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 81 ETPLHLVAMYGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 61/114 (53%)
Query: 722 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 781
A + + V +L+ +GA + A +V LH+A + +++VE+LLK+GA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNAEDKVGLTPLHLAAMNDHLEIVEVLLKNGADVNAIDAIG 80
Query: 782 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 835
E LH+ +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 81 ETPLHLVAMYGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 61/114 (53%)
Query: 755 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 814
A + + V +L+ +GA + A +V LH+A + +++VE+LLK+GA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNAEDKVGLTPLHLAAMNDHLEIVEVLLKNGADVNAIDAIG 80
Query: 815 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 868
E LH+ +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 81 ETPLHLVAMYGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 61/114 (53%)
Query: 788 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 847
A + + V +L+ +GA + A +V LH+A + +++VE+LLK+GA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNAEDKVGLTPLHLAAMNDHLEIVEVLLKNGADVNAIDAIG 80
Query: 848 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 901
E LH+ +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 81 ETPLHLVAMYGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 61/114 (53%)
Query: 821 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 880
A + + V +L+ +GA + A +V LH+A + +++VE+LLK+GA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNAEDKVGLTPLHLAAMNDHLEIVEVLLKNGADVNAIDAIG 80
Query: 881 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 934
E LH+ +++VE+LLKHGA + A + + I+ + E+L K
Sbjct: 81 ETPLHLVAMYGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 64/127 (50%), Gaps = 13/127 (10%)
Query: 1065 KYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEY 1124
+ G ++L+ A V+ + K G+TPLH+A+ DH ++I LL+
Sbjct: 23 RAGQDDEVRILMANGADVNAEDKVGLTPLHLAAMNDH-------------LEIVEVLLKN 69
Query: 1125 GAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVA 1184
GA NA G TPLHL A GH ++ +LL+HGADV+ K G T + +A
Sbjct: 70 GADVNAIDAIGETPLHLVAMYGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLA 129
Query: 1185 ELLLKNN 1191
E+L K N
Sbjct: 130 EILQKLN 136
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 61/113 (53%)
Query: 854 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 913
A + + V +L+ +GA + A +V LH+A + +++VE+LLK+GA + A +
Sbjct: 21 AARAGQDDEVRILMANGADVNAEDKVGLTPLHLAAMNDHLEIVEVLLKNGADVNAIDAIG 80
Query: 914 EPMLHIACKKNRIKVVELLLKHGASSHVVSCYSNVKVHVSLNKIQDVSSSILR 966
E LH+ +++VE+LLKHGA + + +S++ + + IL+
Sbjct: 81 ETPLHLVAMYGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQ 133
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Query: 1294 LHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCT 1353
L +A+ G V +L+ GA NA +K G TPLH+A + + +LL A+V+
Sbjct: 18 LLEAARAGQDDEVRILMANGADVNAEDKV-GLTPLHLAAMNDHLEIVEVLLKNGADVNAI 76
Query: 1354 TDQGFTPLHHSAQQGHSTIVALLLDRGASPNATNK 1388
G TPLH A GH IV +LL GA NA +K
Sbjct: 77 DAIGETPLHLVAMYGHLEIVEVLLKHGADVNAQDK 111
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 45/87 (51%)
Query: 188 LTALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIE 247
LT LH+AA H + + LL AD NA G TPLH+ +++VE+LLKHGA +
Sbjct: 48 LTPLHLAAMNDHLEIVEVLLKNGADVNAIDAIGETPLHLVAMYGHLEIVEVLLKHGADVN 107
Query: 248 ATTEVREPMLHIACKKNRIKVVELLLK 274
A + + I+ + E+L K
Sbjct: 108 AQDKFGKTAFDISIDNGNEDLAEILQK 134
Score = 53.9 bits (128), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 68/156 (43%), Gaps = 44/156 (28%)
Query: 887 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASSHVVSCYS 946
A + + V +L+ +GA + A +V LH+A + +++VE+LLK+GA + +
Sbjct: 21 AARAGQDDEVRILMANGADVNAEDKVGLTPLHLAAMNDHLEIVEVLLKNGADVNAIDAIG 80
Query: 947 NVKVHVSLNKIQDVSSSILRLATCDVLPQCETRLNFSNLRVREQQTPLHIASRLGNVDIV 1006
+TPLH+ + G+++IV
Sbjct: 81 --------------------------------------------ETPLHLVAMYGHLEIV 96
Query: 1007 MLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVL 1042
+LL+HGA V++ K TA I+ G E++A +L
Sbjct: 97 EVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEIL 132
Score = 53.9 bits (128), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 18/117 (15%)
Query: 73 AARSGHEAVIEMLLEQGAPISSKTKVRGFYILRSGHEAVIEMLLEQGAPISSKTKVAAVL 132
AAR+G + + +L+ GA ++++ KV G L A ++ ++ VL
Sbjct: 21 AARAGQDDEVRILMANGADVNAEDKV-GLTPLHL-------------AAMNDHLEIVEVL 66
Query: 133 LENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQ---GKAPVDDVTVD 186
L+NGA + + G TPLHL YGH+++ ++LL+ A V+ Q GK D+++D
Sbjct: 67 LKNGADVNAIDAIGETPLHLVAMYGHLEIVEVLLKHGADVNAQDKFGKTAF-DISID 122
Score = 53.5 bits (127), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 57/93 (61%), Gaps = 3/93 (3%)
Query: 40 AAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISSKTKVR 99
AA+ G+ + V +L++ GA+++ + + GLT LH AA + H ++E+LL+ GA +++ +
Sbjct: 21 AARAGQDDEVRILMANGADVNAEDKVGLTPLHLAAMNDHLEIVEVLLKNGADVNAIDAIG 80
Query: 100 G---FYILRSGHEAVIEMLLEQGAPISSKTKVA 129
+ GH ++E+LL+ GA ++++ K
Sbjct: 81 ETPLHLVAMYGHLEIVEVLLKHGADVNAQDKFG 113
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 56/137 (40%), Gaps = 30/137 (21%)
Query: 1175 CAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFP 1234
Q+D V +L+ N A V+ K G TPLH+A + + +LL A+V
Sbjct: 24 AGQDDEV---RILMANGADVNAEDKVGLTPLHLAAMNDHLEIVEVLLKNGADV------- 73
Query: 1235 SRXXXXXXXXXXXXXXYTNTTDQ-GFTPLHHSAQQGHSTIVALLLDRGASPNATNK-GFT 1292
N D G TPLH A GH IV +LL GA NA +K G T
Sbjct: 74 ------------------NAIDAIGETPLHLVAMYGHLEIVEVLLKHGADVNAQDKFGKT 115
Query: 1293 PLHHSAQQGHSTIVALL 1309
S G+ + +L
Sbjct: 116 AFDISIDNGNEDLAEIL 132
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 51/84 (60%)
Query: 992 TPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTS 1051
TPLH+A+ +++IV +LL++GA V++ T LH+ A G E+ VLL++GA + +
Sbjct: 49 TPLHLAAMNDHLEIVEVLLKNGADVNAIDAIGETPLHLVAMYGHLEIVEVLLKHGADVNA 108
Query: 1052 TTKKGFTPLHLTGKYGHIKVAKLL 1075
K G T ++ G+ +A++L
Sbjct: 109 QDKFGKTAFDISIDNGNEDLAEIL 132
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
Query: 34 ITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPIS 93
+TPLH+AA +V +LL GA+++ G T LH A GH ++E+LL+ GA ++
Sbjct: 48 LTPLHLAAMNDHLEIVEVLLKNGADVNAIDAIGETPLHLVAMYGHLEIVEVLLKHGADVN 107
Query: 94 SKTKV--RGFYI-LRSGHEAVIEML 115
++ K F I + +G+E + E+L
Sbjct: 108 AQDKFGKTAFDISIDNGNEDLAEIL 132
>pdb|2F8Y|A Chain A, Crystal Structure Of Human Notch1 Ankyrin Repeats To 1.55a
Resolution.
pdb|2F8Y|B Chain B, Crystal Structure Of Human Notch1 Ankyrin Repeats To 1.55a
Resolution
Length = 223
Score = 72.0 bits (175), Expect = 2e-12, Method: Composition-based stats.
Identities = 65/190 (34%), Positives = 86/190 (45%), Gaps = 13/190 (6%)
Query: 1038 VAAVLLENGASL-TSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVA 1096
V + + GASL T + G T LHL +Y AK LL+ A + Q G TPLH A
Sbjct: 6 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAA 65
Query: 1097 SHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLE 1156
D Q V +L+ A+ D+ +A G TPL L+A M L+
Sbjct: 66 VSADAQGVFQILIRNRAT-DL-----------DARMHDGTTPLILAARLAVEGMLEDLIN 113
Query: 1157 HGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISM 1216
ADV+ G + LH A + V A +LLKN A D + TPL +A G
Sbjct: 114 SHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYET 173
Query: 1217 ARLLLDQSAN 1226
A++LLD AN
Sbjct: 174 AKVLLDHFAN 183
Score = 60.8 bits (146), Expect = 5e-09, Method: Composition-based stats.
Identities = 65/235 (27%), Positives = 105/235 (44%), Gaps = 23/235 (9%)
Query: 128 VAAVLLENGASL-TSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQ---GKAPVDDV 183
V + + GASL T + G T LHL +Y AK LL+ A + Q G+ P
Sbjct: 6 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTP---- 61
Query: 184 TVDYLTALHVAAHCGHARVAKTLLDKKA-DPNARALNGFTPLHIACKKNRIKVVELLLKH 242
LH A V + L+ +A D +AR +G TPL +A + ++E L+
Sbjct: 62 -------LHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINS 114
Query: 243 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 302
A + A ++ + LH A N + +LLK+GA+ + E L +A ++ +
Sbjct: 115 HADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETA 174
Query: 303 ELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLH 357
++LL H A+ + T + IA ++ +V LL ++ VR P LH
Sbjct: 175 KVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNL-------VRSPQLH 222
Score = 58.9 bits (141), Expect = 2e-08, Method: Composition-based stats.
Identities = 56/203 (27%), Positives = 97/203 (47%), Gaps = 8/203 (3%)
Query: 189 TALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGAS-IE 247
TALH+AA + AK LL+ AD N + G TPLH A + V ++L+++ A+ ++
Sbjct: 27 TALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLD 86
Query: 248 ATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 307
A L +A + ++E L+ A + A ++ + LH A N + +LLK
Sbjct: 87 ARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLK 146
Query: 308 HGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKV 367
+GA+ + E L +A ++ + ++LL H A+ + T + IA ++ +
Sbjct: 147 NGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDI 206
Query: 368 VELLLKHGASIEATTEVREPMLH 390
V LL ++ VR P LH
Sbjct: 207 VRLLDEYNL-------VRSPQLH 222
Score = 53.5 bits (127), Expect = 9e-07, Method: Composition-based stats.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 13/218 (5%)
Query: 895 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASSHVVSCYSNVKVHVS 953
V+ + GAS+ T+ E LH+A + +R + LL+ A +++ +H +
Sbjct: 6 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAA 65
Query: 954 LN-KIQDVSSSILRLATCDVLPQCETRLNFSNLRVREQQTPLHIASRLGNVDIVMLLLQH 1012
++ Q V ++R D+ + R+ + TPL +A+RL ++ L+
Sbjct: 66 VSADAQGVFQILIRNRATDL-----------DARMHDGTTPLILAARLAVEGMLEDLINS 114
Query: 1013 GAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVA 1072
A V++ +ALH AA + A VLL+NGA+ + TPL L + G + A
Sbjct: 115 HADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETA 174
Query: 1073 KLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLE 1110
K+LL A D P +A H ++ LL E
Sbjct: 175 KVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDE 212
Score = 51.2 bits (121), Expect = 4e-06, Method: Composition-based stats.
Identities = 57/212 (26%), Positives = 88/212 (41%), Gaps = 25/212 (11%)
Query: 1166 KNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSA 1225
+ G T LHL A+ R A+ LL+ +A + G TPLH A + ++L+ A
Sbjct: 23 RTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRA 82
Query: 1226 NVTVPKNFPSRXXXXXXXXXXXXXXYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPN 1285
+ +R G TPL +A+ ++ L++ A N
Sbjct: 83 T-----DLDARMH------------------DGTTPLILAARLAVEGMLEDLINSHADVN 119
Query: 1286 ATNK-GFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLL 1344
A + G + LH +A + +LL GA+ + N R TPL +A G A++LL
Sbjct: 120 AVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQN-NREETPLFLAAREGSYETAKVLL 178
Query: 1345 DQSANVSCTTDQGFTPLHHSAQQGHSTIVALL 1376
D AN T P + ++ H IV LL
Sbjct: 179 DHFANRDITDHMDRLPRDIAQERMHHDIVRLL 210
Score = 46.6 bits (109), Expect = 1e-04, Method: Composition-based stats.
Identities = 59/225 (26%), Positives = 90/225 (40%), Gaps = 39/225 (17%)
Query: 1087 KNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEG 1146
+ G T LH+A+ Y D A LLE A N + G TPLH + S
Sbjct: 23 RTGETALHLAARYSRS-------------DAAKRLLEASADANIQDNMGRTPLHAAVSAD 69
Query: 1147 HADMSAMLLEHGA-DVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPL 1205
+ +L+ + A D+ +G TPL L A+ G+ E L+ ++A V+ G + L
Sbjct: 70 AQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSAL 129
Query: 1206 HIACHYGQISMARLLLDQSANVTVPKNFPSRXXXXXXXXXXXXXXYTNTTDQGFTPLHHS 1265
H A + A +LL AN + N TPL +
Sbjct: 130 HWAAAVNNVDAAVVLLKNGANKDMQNNREE------------------------TPLFLA 165
Query: 1266 AQQGHSTIVALLLDRGASPNATNK-GFTPLHHSAQQGHSTIVALL 1309
A++G +LLD A+ + T+ P + ++ H IV LL
Sbjct: 166 AREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLL 210
Score = 45.8 bits (107), Expect = 2e-04, Method: Composition-based stats.
Identities = 53/224 (23%), Positives = 100/224 (44%), Gaps = 9/224 (4%)
Query: 235 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 293
V+ + GAS+ T+ E LH+A + +R + LL+ A + LH A
Sbjct: 6 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAA 65
Query: 294 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 352
+ V ++L+++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 66 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 125
Query: 353 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 412
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 126 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 185
Query: 413 ATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLH 456
T + IA ++ +V LL ++ VR P LH
Sbjct: 186 ITDHMDRLPRDIAQERMHHDIVRLLDEYNL-------VRSPQLH 222
Score = 45.8 bits (107), Expect = 2e-04, Method: Composition-based stats.
Identities = 53/224 (23%), Positives = 100/224 (44%), Gaps = 9/224 (4%)
Query: 268 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 326
V+ + GAS+ T+ E LH+A + +R + LL+ A + LH A
Sbjct: 6 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAA 65
Query: 327 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 385
+ V ++L+++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 66 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 125
Query: 386 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 445
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 126 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 185
Query: 446 ATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLH 489
T + IA ++ +V LL ++ VR P LH
Sbjct: 186 ITDHMDRLPRDIAQERMHHDIVRLLDEYNL-------VRSPQLH 222
Score = 45.8 bits (107), Expect = 2e-04, Method: Composition-based stats.
Identities = 53/224 (23%), Positives = 100/224 (44%), Gaps = 9/224 (4%)
Query: 301 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 359
V+ + GAS+ T+ E LH+A + +R + LL+ A + LH A
Sbjct: 6 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAA 65
Query: 360 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 418
+ V ++L+++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 66 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 125
Query: 419 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 478
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 126 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 185
Query: 479 ATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLH 522
T + IA ++ +V LL ++ VR P LH
Sbjct: 186 ITDHMDRLPRDIAQERMHHDIVRLLDEYNL-------VRSPQLH 222
Score = 45.8 bits (107), Expect = 2e-04, Method: Composition-based stats.
Identities = 53/224 (23%), Positives = 100/224 (44%), Gaps = 9/224 (4%)
Query: 334 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 392
V+ + GAS+ T+ E LH+A + +R + LL+ A + LH A
Sbjct: 6 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAA 65
Query: 393 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 451
+ V ++L+++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 66 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 125
Query: 452 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 511
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 126 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 185
Query: 512 ATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLH 555
T + IA ++ +V LL ++ VR P LH
Sbjct: 186 ITDHMDRLPRDIAQERMHHDIVRLLDEYNL-------VRSPQLH 222
Score = 45.8 bits (107), Expect = 2e-04, Method: Composition-based stats.
Identities = 53/224 (23%), Positives = 100/224 (44%), Gaps = 9/224 (4%)
Query: 367 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 425
V+ + GAS+ T+ E LH+A + +R + LL+ A + LH A
Sbjct: 6 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAA 65
Query: 426 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 484
+ V ++L+++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 66 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 125
Query: 485 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 544
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 126 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 185
Query: 545 ATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLH 588
T + IA ++ +V LL ++ VR P LH
Sbjct: 186 ITDHMDRLPRDIAQERMHHDIVRLLDEYNL-------VRSPQLH 222
Score = 45.8 bits (107), Expect = 2e-04, Method: Composition-based stats.
Identities = 53/224 (23%), Positives = 100/224 (44%), Gaps = 9/224 (4%)
Query: 400 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 458
V+ + GAS+ T+ E LH+A + +R + LL+ A + LH A
Sbjct: 6 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAA 65
Query: 459 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 517
+ V ++L+++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 66 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 125
Query: 518 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 577
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 126 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 185
Query: 578 ATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLH 621
T + IA ++ +V LL ++ VR P LH
Sbjct: 186 ITDHMDRLPRDIAQERMHHDIVRLLDEYNL-------VRSPQLH 222
Score = 45.8 bits (107), Expect = 2e-04, Method: Composition-based stats.
Identities = 53/224 (23%), Positives = 100/224 (44%), Gaps = 9/224 (4%)
Query: 433 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 491
V+ + GAS+ T+ E LH+A + +R + LL+ A + LH A
Sbjct: 6 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAA 65
Query: 492 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 550
+ V ++L+++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 66 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 125
Query: 551 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 610
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 126 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 185
Query: 611 ATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLH 654
T + IA ++ +V LL ++ VR P LH
Sbjct: 186 ITDHMDRLPRDIAQERMHHDIVRLLDEYNL-------VRSPQLH 222
Score = 45.8 bits (107), Expect = 2e-04, Method: Composition-based stats.
Identities = 53/224 (23%), Positives = 100/224 (44%), Gaps = 9/224 (4%)
Query: 466 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 524
V+ + GAS+ T+ E LH+A + +R + LL+ A + LH A
Sbjct: 6 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAA 65
Query: 525 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 583
+ V ++L+++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 66 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 125
Query: 584 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 643
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 126 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 185
Query: 644 ATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLH 687
T + IA ++ +V LL ++ VR P LH
Sbjct: 186 ITDHMDRLPRDIAQERMHHDIVRLLDEYNL-------VRSPQLH 222
Score = 45.8 bits (107), Expect = 2e-04, Method: Composition-based stats.
Identities = 53/224 (23%), Positives = 100/224 (44%), Gaps = 9/224 (4%)
Query: 499 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 557
V+ + GAS+ T+ E LH+A + +R + LL+ A + LH A
Sbjct: 6 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAA 65
Query: 558 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 616
+ V ++L+++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 66 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 125
Query: 617 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 676
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 126 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 185
Query: 677 ATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLH 720
T + IA ++ +V LL ++ VR P LH
Sbjct: 186 ITDHMDRLPRDIAQERMHHDIVRLLDEYNL-------VRSPQLH 222
Score = 45.8 bits (107), Expect = 2e-04, Method: Composition-based stats.
Identities = 53/224 (23%), Positives = 100/224 (44%), Gaps = 9/224 (4%)
Query: 532 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 590
V+ + GAS+ T+ E LH+A + +R + LL+ A + LH A
Sbjct: 6 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAA 65
Query: 591 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 649
+ V ++L+++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 66 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 125
Query: 650 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 709
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 126 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 185
Query: 710 ATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLH 753
T + IA ++ +V LL ++ VR P LH
Sbjct: 186 ITDHMDRLPRDIAQERMHHDIVRLLDEYNL-------VRSPQLH 222
Score = 45.8 bits (107), Expect = 2e-04, Method: Composition-based stats.
Identities = 53/224 (23%), Positives = 100/224 (44%), Gaps = 9/224 (4%)
Query: 565 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 623
V+ + GAS+ T+ E LH+A + +R + LL+ A + LH A
Sbjct: 6 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAA 65
Query: 624 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 682
+ V ++L+++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 66 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 125
Query: 683 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 742
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 126 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 185
Query: 743 ATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLH 786
T + IA ++ +V LL ++ VR P LH
Sbjct: 186 ITDHMDRLPRDIAQERMHHDIVRLLDEYNL-------VRSPQLH 222
Score = 45.8 bits (107), Expect = 2e-04, Method: Composition-based stats.
Identities = 53/224 (23%), Positives = 100/224 (44%), Gaps = 9/224 (4%)
Query: 598 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 656
V+ + GAS+ T+ E LH+A + +R + LL+ A + LH A
Sbjct: 6 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAA 65
Query: 657 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 715
+ V ++L+++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 66 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 125
Query: 716 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 775
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 126 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 185
Query: 776 ATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLH 819
T + IA ++ +V LL ++ VR P LH
Sbjct: 186 ITDHMDRLPRDIAQERMHHDIVRLLDEYNL-------VRSPQLH 222
Score = 45.8 bits (107), Expect = 2e-04, Method: Composition-based stats.
Identities = 53/224 (23%), Positives = 100/224 (44%), Gaps = 9/224 (4%)
Query: 631 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 689
V+ + GAS+ T+ E LH+A + +R + LL+ A + LH A
Sbjct: 6 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAA 65
Query: 690 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 748
+ V ++L+++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 66 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 125
Query: 749 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 808
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 126 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 185
Query: 809 ATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLH 852
T + IA ++ +V LL ++ VR P LH
Sbjct: 186 ITDHMDRLPRDIAQERMHHDIVRLLDEYNL-------VRSPQLH 222
Score = 45.8 bits (107), Expect = 2e-04, Method: Composition-based stats.
Identities = 53/224 (23%), Positives = 100/224 (44%), Gaps = 9/224 (4%)
Query: 664 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 722
V+ + GAS+ T+ E LH+A + +R + LL+ A + LH A
Sbjct: 6 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAA 65
Query: 723 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 781
+ V ++L+++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 66 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 125
Query: 782 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 841
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 126 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 185
Query: 842 ATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLH 885
T + IA ++ +V LL ++ VR P LH
Sbjct: 186 ITDHMDRLPRDIAQERMHHDIVRLLDEYNL-------VRSPQLH 222
Score = 45.8 bits (107), Expect = 2e-04, Method: Composition-based stats.
Identities = 53/224 (23%), Positives = 100/224 (44%), Gaps = 9/224 (4%)
Query: 697 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 755
V+ + GAS+ T+ E LH+A + +R + LL+ A + LH A
Sbjct: 6 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAA 65
Query: 756 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 814
+ V ++L+++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 66 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 125
Query: 815 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 874
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 126 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 185
Query: 875 ATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLH 918
T + IA ++ +V LL ++ VR P LH
Sbjct: 186 ITDHMDRLPRDIAQERMHHDIVRLLDEYNL-------VRSPQLH 222
Score = 45.4 bits (106), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/137 (29%), Positives = 60/137 (43%), Gaps = 2/137 (1%)
Query: 1253 NTTDQ-GFTPLHHSAQQGHSTIVALLLDRGASPN-ATNKGFTPLHHSAQQGHSTIVALLL 1310
N TD+ G T LH +A+ S LL+ A N N G TPLH + + +L+
Sbjct: 19 NQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILI 78
Query: 1311 DRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHS 1370
A+ G TPL +A M L++ A+V+ D G + LH +A +
Sbjct: 79 RNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNV 138
Query: 1371 TIVALLLDRGASPNATN 1387
+LL GA+ + N
Sbjct: 139 DAAVVLLKNGANKDMQN 155
Score = 42.7 bits (99), Expect = 0.001, Method: Composition-based stats.
Identities = 48/205 (23%), Positives = 93/205 (45%), Gaps = 2/205 (0%)
Query: 730 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 788
V+ + GAS+ T+ E LH+A + +R + LL+ A + LH A
Sbjct: 6 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAA 65
Query: 789 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 847
+ V ++L+++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 66 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 125
Query: 848 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 907
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+ +
Sbjct: 126 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 185
Query: 908 ATTEVREPMLHIACKKNRIKVVELL 932
T + IA ++ +V LL
Sbjct: 186 ITDHMDRLPRDIAQERMHHDIVRLL 210
Score = 41.6 bits (96), Expect = 0.003, Method: Composition-based stats.
Identities = 63/246 (25%), Positives = 107/246 (43%), Gaps = 31/246 (12%)
Query: 48 MVTLLLSRGANIDNKT-RDGLTALHCAARSGHEAVIEMLLEQGAPISSKTKVRGFYILRS 106
+++ + +GA++ N+T R G TALH AAR + LLE A + + + R+
Sbjct: 6 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMG-----RT 60
Query: 107 GHEAVIEMLLEQGAPISSKTKVAAVLLENGAS-LTSTTKKGFTPLHLTGKYGHIKVAKLL 165
A + + V +L+ N A+ L + G TPL L + + + L
Sbjct: 61 PLHAAVS---------ADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDL 111
Query: 166 LQKDAPVDFQGKAPVDDVTVDYLTALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLH 225
+ A V+ VDD+ +ALH AA + A LL A+ + + TPL
Sbjct: 112 INSHADVN-----AVDDLGK---SALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLF 163
Query: 226 IACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEV 285
+A ++ + ++LL H A+ + T + IA ++ +V LL ++ V
Sbjct: 164 LAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNL-------V 216
Query: 286 REPMLH 291
R P LH
Sbjct: 217 RSPQLH 222
Score = 40.4 bits (93), Expect = 0.006, Method: Composition-based stats.
Identities = 42/181 (23%), Positives = 83/181 (45%), Gaps = 2/181 (1%)
Query: 763 VVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 821
V+ + GAS+ T+ E LH+A + +R + LL+ A + LH A
Sbjct: 6 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAA 65
Query: 822 CKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 880
+ V ++L+++ A+ ++A L +A + ++E L+ A + A ++
Sbjct: 66 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 125
Query: 881 EPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASSH 940
+ LH A N + +LLK+GA+ + E L +A ++ + ++LL H A+
Sbjct: 126 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 185
Query: 941 V 941
+
Sbjct: 186 I 186
Score = 39.7 bits (91), Expect = 0.011, Method: Composition-based stats.
Identities = 54/224 (24%), Positives = 87/224 (38%), Gaps = 28/224 (12%)
Query: 35 TPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISS 94
T LH+AA++ +++ LL A+ + + G T LH A + + V ++L+ A
Sbjct: 27 TALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLD 86
Query: 95 KTKVRGFYILRSGHEAVIEMLLEQGAPISSKTKVAAVLLENGASLTSTTKKGFTPLHLTG 154
G L +E +LE L+ + A + + G + LH
Sbjct: 87 ARMHDGTTPLILAARLAVEGMLED-------------LINSHADVNAVDDLGKSALHWAA 133
Query: 155 KYGHIKVAKLLLQKDAPVDFQGKAPVDDVTVDYLTALHVAAHCGHARVAKTLLDKKADPN 214
++ A +LL+ A D Q T L +AA G AK LLD A+ +
Sbjct: 134 AVNNVDAAVVLLKNGANKDMQNNREE--------TPLFLAAREGSYETAKVLLDHFANRD 185
Query: 215 ARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVREPMLH 258
P IA ++ +V LL ++ VR P LH
Sbjct: 186 ITDHMDRLPRDIAQERMHHDIVRLLDEYNL-------VRSPQLH 222
Score = 39.3 bits (90), Expect = 0.016, Method: Composition-based stats.
Identities = 36/136 (26%), Positives = 64/136 (47%), Gaps = 1/136 (0%)
Query: 983 SNLRVREQQTPLHIASRLGNVDIVMLLLQHGAA-VDSTTKDLYTALHIAAKEGQEEVAAV 1041
+N++ +TPLH A + +L+++ A +D+ D T L +AA+ E +
Sbjct: 51 ANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLED 110
Query: 1042 LLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDH 1101
L+ + A + + G + LH ++ A +LL+ A D Q TPL +A+
Sbjct: 111 LINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGS 170
Query: 1102 QNVALLLLEKGASMDI 1117
A +LL+ A+ DI
Sbjct: 171 YETAKVLLDHFANRDI 186
Score = 37.7 bits (86), Expect = 0.045, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 39/78 (50%)
Query: 1305 IVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHS 1364
+++ + +GAS + G T LH+A Y + A+ LL+ SA+ + + G TPLH +
Sbjct: 6 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAA 65
Query: 1365 AQQGHSTIVALLLDRGAS 1382
+ +L+ A+
Sbjct: 66 VSADAQGVFQILIRNRAT 83
>pdb|1IXV|A Chain A, Crystal Structure Analysis Of Homolog Of Oncoprotein
Gankyrin, An Interactor Of Rb And Cdk46
Length = 231
Score = 70.5 bits (171), Expect = 6e-12, Method: Composition-based stats.
Identities = 60/215 (27%), Positives = 94/215 (43%), Gaps = 29/215 (13%)
Query: 1171 PLH-LCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTV 1229
PLH C + + V ELL + + + G PLH + + + LL + NV +
Sbjct: 5 PLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNL 64
Query: 1230 PKNFPSRXXXXXXXXXXXXXXYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPN---A 1286
++P D G+TP H + G+ +V L DR P+
Sbjct: 65 -DDYPD--------------------DSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKI 103
Query: 1287 TNKGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLL--L 1344
TN+G T LH + + + L++ GAS +K PLH A G + + LL L
Sbjct: 104 TNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQI-PLHRAASVGSLKLIELLCGL 162
Query: 1345 DQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDR 1379
+SA V+ QG+TPL H+ +GH LL+++
Sbjct: 163 GKSA-VNWQDKQGWTPLFHALAEGHGDAAVLLVEK 196
Score = 69.7 bits (169), Expect = 1e-11, Method: Composition-based stats.
Identities = 58/148 (39%), Positives = 76/148 (51%), Gaps = 11/148 (7%)
Query: 992 TPLHIASRLGNVDIVMLLLQHGAAVD--STTKDLYTALHIAAKEGQEEVAAVLLENGASL 1049
TP HIA +GN+++V L D T T LH+A + EV+ L+ENGAS+
Sbjct: 74 TPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASV 133
Query: 1050 TSTTKKGFTPLHLTGKYGHIKVAKLL--LQKDAPVDFQGKNGVTPLHVASHYDHQNVALL 1107
K PLH G +K+ +LL L K A V++Q K G TPL A H + A+L
Sbjct: 134 RIKDKFNQIPLHRAASVGSLKLIELLCGLGKSA-VNWQDKQGWTPLFHALAEGHGDAAVL 192
Query: 1108 LLEK-GASMDIATTLLEYGAKPNAESVA 1134
L+EK GA D+ GAK AE VA
Sbjct: 193 LVEKYGAEYDLVDN---KGAK--AEDVA 215
Score = 59.7 bits (143), Expect = 1e-08, Method: Composition-based stats.
Identities = 54/212 (25%), Positives = 89/212 (41%), Gaps = 48/212 (22%)
Query: 1074 LLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESV 1133
LLLQKD ++G PLH + + + LL K ++++ +
Sbjct: 28 LLLQKD-------QDGRIPLHWSVSFQAHEITSFLLSKMENVNL----------DDYPDD 70
Query: 1134 AGFTPLHLSASEGHADMSAMLLEH--GADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNN 1191
+G+TP H++ S G+ ++ L + D++ G+T LHL + V++ L++N
Sbjct: 71 SGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENG 130
Query: 1192 AQVDTPTKKGFTPLHIACHYGQISMARLL--LDQSANVTVPKNFPSRXXXXXXXXXXXXX 1249
A V K PLH A G + + LL L +SA
Sbjct: 131 ASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSA------------------------ 166
Query: 1250 XYTNTTD-QGFTPLHHSAQQGHSTIVALLLDR 1280
N D QG+TPL H+ +GH LL+++
Sbjct: 167 --VNWQDKQGWTPLFHALAEGHGDAAVLLVEK 196
Score = 59.7 bits (143), Expect = 1e-08, Method: Composition-based stats.
Identities = 53/192 (27%), Positives = 86/192 (44%), Gaps = 11/192 (5%)
Query: 127 KVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKAPVDDVTVD 186
KV +L + L + G PLH + + ++ LL K V+ +DD D
Sbjct: 17 KVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVN------LDDYPDD 70
Query: 187 Y-LTALHVAAHCGHARVAKTLLDK--KADPNARALNGFTPLHIACKKNRIKVVELLLKHG 243
T H+A G+ V K+L D+ K D N G T LH+A K +V + L+++G
Sbjct: 71 SGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENG 130
Query: 244 ASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR--EPMLHIACKKNRIKV 301
AS+ + + LH A +K++ELL G S + + P+ H + +
Sbjct: 131 ASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAA 190
Query: 302 VELLLKHGASIE 313
V L+ K+GA +
Sbjct: 191 VLLVEKYGAEYD 202
Score = 57.8 bits (138), Expect = 5e-08, Method: Composition-based stats.
Identities = 49/185 (26%), Positives = 73/185 (39%), Gaps = 26/185 (14%)
Query: 1166 KNGLTPLHLCAQEDRVGVAELLLKNNAQV---DTPTKKGFTPLHIACHYGQISMARLLLD 1222
++G PLH + LL V D P G+TP HIAC G + + + L D
Sbjct: 34 QDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYD 93
Query: 1223 QSANVTVPKNFPSRXXXXXXXXXXXXXXYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGA 1282
+ + K T+QG T LH + + + L++ GA
Sbjct: 94 RPLKPDLNK----------------------ITNQGVTCLHLAVGKKWFEVSQFLIENGA 131
Query: 1283 SPNATNK-GFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMAR 1341
S +K PLH +A G ++ LL G S +G+TPL A G A
Sbjct: 132 SVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAV 191
Query: 1342 LLLDQ 1346
LL+++
Sbjct: 192 LLVEK 196
Score = 51.2 bits (121), Expect = 4e-06, Method: Composition-based stats.
Identities = 49/179 (27%), Positives = 74/179 (41%), Gaps = 18/179 (10%)
Query: 988 REQQTPLHIASRLGNVDIVMLLLQHGAAV---DSTTKDLYTALHIAAKEGQEEVAAVLLE 1044
++ + PLH + +I LL V D +T HIA G EV L +
Sbjct: 34 QDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYD 93
Query: 1045 N--GASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQ 1102
L T +G T LHL +V++ L++ A V + K PLH A+
Sbjct: 94 RPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSL 153
Query: 1103 NVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLE-HGAD 1160
+ LL G S N + G+TPL + +EGH D + +L+E +GA+
Sbjct: 154 KLIELLCGLGKS------------AVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAE 200
Score = 50.1 bits (118), Expect = 8e-06, Method: Composition-based stats.
Identities = 37/130 (28%), Positives = 57/130 (43%), Gaps = 5/130 (3%)
Query: 1258 GFTPLHHSAQQGHSTIVALLLDRGASPN----ATNKGFTPLHHSAQQGHSTIVALLLDRG 1313
G PLH S I + LL + + N + G+TP H + G+ +V L DR
Sbjct: 36 GRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRP 95
Query: 1314 ASPNATNKT-RGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTI 1372
P+ T +G T LH+A +++ L++ A+V PLH +A G +
Sbjct: 96 LKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKL 155
Query: 1373 VALLLDRGAS 1382
+ LL G S
Sbjct: 156 IELLCGLGKS 165
Score = 46.6 bits (109), Expect = 1e-04, Method: Composition-based stats.
Identities = 37/134 (27%), Positives = 58/134 (43%), Gaps = 6/134 (4%)
Query: 1261 PLHHSAQQGHSTIVALLLDRGASP--NATNKGFTPLHHSAQQGHSTIVALLLDRGASPNA 1318
PLH + + V LL S G PLH S I + LL + + N
Sbjct: 5 PLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNL 64
Query: 1319 TN--KTRGFTPLHIACHYGQISMARLLLDQ--SANVSCTTDQGFTPLHHSAQQGHSTIVA 1374
+ G+TP HIAC G + + + L D+ +++ T+QG T LH + + +
Sbjct: 65 DDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQ 124
Query: 1375 LLLDRGASPNATNK 1388
L++ GAS +K
Sbjct: 125 FLIENGASVRIKDK 138
Score = 45.8 bits (107), Expect = 2e-04, Method: Composition-based stats.
Identities = 51/195 (26%), Positives = 81/195 (41%), Gaps = 26/195 (13%)
Query: 1 IRWTHYWKLHKVTKYSQKVINTINPFGSHFQHNITPLHVAAKWGKANMVTLLLSRGANID 60
+ W+ ++ H++T + + +N TP H+A G +V L R D
Sbjct: 40 LHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPD 99
Query: 61 -NK-TRDGLTALHCAARSGHEAVIEMLLEQGAPISSKTKVRGFYILRS---GHEAVIEML 115
NK T G+T LH A V + L+E GA + K K + R+ G +IE+L
Sbjct: 100 LNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELL 159
Query: 116 LEQGAPISSKTKVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAP---- 171
G +++ K+G+TPL GH A LL++K
Sbjct: 160 CGLGK----------------SAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDL 203
Query: 172 VDFQGKAPVDDVTVD 186
VD +G A +DV ++
Sbjct: 204 VDNKG-AKAEDVALN 217
Score = 45.1 bits (105), Expect = 3e-04, Method: Composition-based stats.
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 10/199 (5%)
Query: 223 PLHIACKKNRIKVVELLLKHGAS--IEATTEVREPMLHIACKKNRIKVVELLLKHGASI- 279
PLH AC +N V+ LL S ++ + R P LH + ++ LL ++
Sbjct: 5 PLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIP-LHWSVSFQAHEITSFLLSKMENVN 63
Query: 280 --EATTEVREPMLHIACKKNRIKVVELLLKH--GASIEATTEVREPMLHIACKKNRIKVV 335
+ + HIAC ++VV+ L + T LH+A K +V
Sbjct: 64 LDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVS 123
Query: 336 ELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR--EPMLHIAC 393
+ L+++GAS+ + + LH A +K++ELL G S + + P+ H
Sbjct: 124 QFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALA 183
Query: 394 KKNRIKVVELLLKHGASIE 412
+ + V L+ K+GA +
Sbjct: 184 EGHGDAAVLLVEKYGAEYD 202
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 48/198 (24%), Positives = 84/198 (42%), Gaps = 10/198 (5%)
Query: 257 LHIACKKNRIKVVELLLKHGASI--EATTEVREPMLHIACKKNRIKVVELLLKHGASI-- 312
LH AC +N V+ LL S+ + + R P LH + ++ LL ++
Sbjct: 6 LHQACMENEFFKVQELLHSKPSLLLQKDQDGRIP-LHWSVSFQAHEITSFLLSKMENVNL 64
Query: 313 -EATTEVREPMLHIACKKNRIKVVELLLKH--GASIEATTEVREPMLHIACKKNRIKVVE 369
+ + HIAC ++VV+ L + T LH+A K +V +
Sbjct: 65 DDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQ 124
Query: 370 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR--EPMLHIACK 427
L+++GAS+ + + LH A +K++ELL G S + + P+ H +
Sbjct: 125 FLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAE 184
Query: 428 KNRIKVVELLLKHGASIE 445
+ V L+ K+GA +
Sbjct: 185 GHGDAAVLLVEKYGAEYD 202
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 48/198 (24%), Positives = 84/198 (42%), Gaps = 10/198 (5%)
Query: 323 LHIACKKNRIKVVELLLKHGASI--EATTEVREPMLHIACKKNRIKVVELLLKHGASI-- 378
LH AC +N V+ LL S+ + + R P LH + ++ LL ++
Sbjct: 6 LHQACMENEFFKVQELLHSKPSLLLQKDQDGRIP-LHWSVSFQAHEITSFLLSKMENVNL 64
Query: 379 -EATTEVREPMLHIACKKNRIKVVELLLKH--GASIEATTEVREPMLHIACKKNRIKVVE 435
+ + HIAC ++VV+ L + T LH+A K +V +
Sbjct: 65 DDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQ 124
Query: 436 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR--EPMLHIACK 493
L+++GAS+ + + LH A +K++ELL G S + + P+ H +
Sbjct: 125 FLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAE 184
Query: 494 KNRIKVVELLLKHGASIE 511
+ V L+ K+GA +
Sbjct: 185 GHGDAAVLLVEKYGAEYD 202
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 48/198 (24%), Positives = 84/198 (42%), Gaps = 10/198 (5%)
Query: 389 LHIACKKNRIKVVELLLKHGASI--EATTEVREPMLHIACKKNRIKVVELLLKHGASI-- 444
LH AC +N V+ LL S+ + + R P LH + ++ LL ++
Sbjct: 6 LHQACMENEFFKVQELLHSKPSLLLQKDQDGRIP-LHWSVSFQAHEITSFLLSKMENVNL 64
Query: 445 -EATTEVREPMLHIACKKNRIKVVELLLKH--GASIEATTEVREPMLHIACKKNRIKVVE 501
+ + HIAC ++VV+ L + T LH+A K +V +
Sbjct: 65 DDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQ 124
Query: 502 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR--EPMLHIACK 559
L+++GAS+ + + LH A +K++ELL G S + + P+ H +
Sbjct: 125 FLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAE 184
Query: 560 KNRIKVVELLLKHGASIE 577
+ V L+ K+GA +
Sbjct: 185 GHGDAAVLLVEKYGAEYD 202
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 48/198 (24%), Positives = 84/198 (42%), Gaps = 10/198 (5%)
Query: 455 LHIACKKNRIKVVELLLKHGASI--EATTEVREPMLHIACKKNRIKVVELLLKHGASI-- 510
LH AC +N V+ LL S+ + + R P LH + ++ LL ++
Sbjct: 6 LHQACMENEFFKVQELLHSKPSLLLQKDQDGRIP-LHWSVSFQAHEITSFLLSKMENVNL 64
Query: 511 -EATTEVREPMLHIACKKNRIKVVELLLKH--GASIEATTEVREPMLHIACKKNRIKVVE 567
+ + HIAC ++VV+ L + T LH+A K +V +
Sbjct: 65 DDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQ 124
Query: 568 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR--EPMLHIACK 625
L+++GAS+ + + LH A +K++ELL G S + + P+ H +
Sbjct: 125 FLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAE 184
Query: 626 KNRIKVVELLLKHGASIE 643
+ V L+ K+GA +
Sbjct: 185 GHGDAAVLLVEKYGAEYD 202
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 48/198 (24%), Positives = 84/198 (42%), Gaps = 10/198 (5%)
Query: 521 LHIACKKNRIKVVELLLKHGASI--EATTEVREPMLHIACKKNRIKVVELLLKHGASI-- 576
LH AC +N V+ LL S+ + + R P LH + ++ LL ++
Sbjct: 6 LHQACMENEFFKVQELLHSKPSLLLQKDQDGRIP-LHWSVSFQAHEITSFLLSKMENVNL 64
Query: 577 -EATTEVREPMLHIACKKNRIKVVELLLKH--GASIEATTEVREPMLHIACKKNRIKVVE 633
+ + HIAC ++VV+ L + T LH+A K +V +
Sbjct: 65 DDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQ 124
Query: 634 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR--EPMLHIACK 691
L+++GAS+ + + LH A +K++ELL G S + + P+ H +
Sbjct: 125 FLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAE 184
Query: 692 KNRIKVVELLLKHGASIE 709
+ V L+ K+GA +
Sbjct: 185 GHGDAAVLLVEKYGAEYD 202
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 48/198 (24%), Positives = 84/198 (42%), Gaps = 10/198 (5%)
Query: 587 LHIACKKNRIKVVELLLKHGASI--EATTEVREPMLHIACKKNRIKVVELLLKHGASI-- 642
LH AC +N V+ LL S+ + + R P LH + ++ LL ++
Sbjct: 6 LHQACMENEFFKVQELLHSKPSLLLQKDQDGRIP-LHWSVSFQAHEITSFLLSKMENVNL 64
Query: 643 -EATTEVREPMLHIACKKNRIKVVELLLKH--GASIEATTEVREPMLHIACKKNRIKVVE 699
+ + HIAC ++VV+ L + T LH+A K +V +
Sbjct: 65 DDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQ 124
Query: 700 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR--EPMLHIACK 757
L+++GAS+ + + LH A +K++ELL G S + + P+ H +
Sbjct: 125 FLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAE 184
Query: 758 KNRIKVVELLLKHGASIE 775
+ V L+ K+GA +
Sbjct: 185 GHGDAAVLLVEKYGAEYD 202
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 48/198 (24%), Positives = 84/198 (42%), Gaps = 10/198 (5%)
Query: 653 LHIACKKNRIKVVELLLKHGASI--EATTEVREPMLHIACKKNRIKVVELLLKHGASI-- 708
LH AC +N V+ LL S+ + + R P LH + ++ LL ++
Sbjct: 6 LHQACMENEFFKVQELLHSKPSLLLQKDQDGRIP-LHWSVSFQAHEITSFLLSKMENVNL 64
Query: 709 -EATTEVREPMLHIACKKNRIKVVELLLKH--GASIEATTEVREPMLHIACKKNRIKVVE 765
+ + HIAC ++VV+ L + T LH+A K +V +
Sbjct: 65 DDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQ 124
Query: 766 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR--EPMLHIACK 823
L+++GAS+ + + LH A +K++ELL G S + + P+ H +
Sbjct: 125 FLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAE 184
Query: 824 KNRIKVVELLLKHGASIE 841
+ V L+ K+GA +
Sbjct: 185 GHGDAAVLLVEKYGAEYD 202
Score = 40.4 bits (93), Expect = 0.007, Method: Composition-based stats.
Identities = 41/162 (25%), Positives = 70/162 (43%), Gaps = 8/162 (4%)
Query: 785 LHIACKKNRIKVVELLLKHGASI--EATTEVREPMLHIACKKNRIKVVELLLKHGASI-- 840
LH AC +N V+ LL S+ + + R P LH + ++ LL ++
Sbjct: 6 LHQACMENEFFKVQELLHSKPSLLLQKDQDGRIP-LHWSVSFQAHEITSFLLSKMENVNL 64
Query: 841 -EATTEVREPMLHIACKKNRIKVVELLLKH--GASIEATTEVREPMLHIACKKNRIKVVE 897
+ + HIAC ++VV+ L + T LH+A K +V +
Sbjct: 65 DDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQ 124
Query: 898 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASS 939
L+++GAS+ + + LH A +K++ELL G S+
Sbjct: 125 FLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSA 166
>pdb|2DZN|A Chain A, Crystal Structure Analysis Of Yeast Nas6p Complexed With The
Proteasome Subunit, Rpt3
pdb|2DZN|C Chain C, Crystal Structure Analysis Of Yeast Nas6p Complexed With The
Proteasome Subunit, Rpt3
pdb|2DZN|E Chain E, Crystal Structure Analysis Of Yeast Nas6p Complexed With The
Proteasome Subunit, Rpt3
pdb|2DZO|A Chain A, Crystal Structure Analysis Of Yeast Nas6p Complexed With The
Proteasome Subunit, Rpt3
pdb|2DZO|C Chain C, Crystal Structure Analysis Of Yeast Nas6p Complexed With The
Proteasome Subunit, Rpt3
Length = 228
Score = 70.5 bits (171), Expect = 6e-12, Method: Composition-based stats.
Identities = 60/215 (27%), Positives = 94/215 (43%), Gaps = 29/215 (13%)
Query: 1171 PLH-LCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTV 1229
PLH C + + V ELL + + + G PLH + + + LL + NV +
Sbjct: 5 PLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNL 64
Query: 1230 PKNFPSRXXXXXXXXXXXXXXYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPN---A 1286
++P D G+TP H + G+ +V L DR P+
Sbjct: 65 -DDYPD--------------------DSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKI 103
Query: 1287 TNKGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLL--L 1344
TN+G T LH + + + L++ GAS +K PLH A G + + LL L
Sbjct: 104 TNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQI-PLHRAASVGSLKLIELLCGL 162
Query: 1345 DQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDR 1379
+SA V+ QG+TPL H+ +GH LL+++
Sbjct: 163 GKSA-VNWQDKQGWTPLFHALAEGHGDAAVLLVEK 196
Score = 69.3 bits (168), Expect = 1e-11, Method: Composition-based stats.
Identities = 58/148 (39%), Positives = 76/148 (51%), Gaps = 11/148 (7%)
Query: 992 TPLHIASRLGNVDIVMLLLQHGAAVD--STTKDLYTALHIAAKEGQEEVAAVLLENGASL 1049
TP HIA +GN+++V L D T T LH+A + EV+ L+ENGAS+
Sbjct: 74 TPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASV 133
Query: 1050 TSTTKKGFTPLHLTGKYGHIKVAKLL--LQKDAPVDFQGKNGVTPLHVASHYDHQNVALL 1107
K PLH G +K+ +LL L K A V++Q K G TPL A H + A+L
Sbjct: 134 RIKDKFNQIPLHRAASVGSLKLIELLCGLGKSA-VNWQDKQGWTPLFHALAEGHGDAAVL 192
Query: 1108 LLEK-GASMDIATTLLEYGAKPNAESVA 1134
L+EK GA D+ GAK AE VA
Sbjct: 193 LVEKYGAEYDLVDN---KGAK--AEDVA 215
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 54/212 (25%), Positives = 89/212 (41%), Gaps = 48/212 (22%)
Query: 1074 LLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESV 1133
LLLQKD ++G PLH + + + LL K ++++ +
Sbjct: 28 LLLQKD-------QDGRIPLHWSVSFQAHEITSFLLSKMENVNL----------DDYPDD 70
Query: 1134 AGFTPLHLSASEGHADMSAMLLEH--GADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNN 1191
+G+TP H++ S G+ ++ L + D++ G+T LHL + V++ L++N
Sbjct: 71 SGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENG 130
Query: 1192 AQVDTPTKKGFTPLHIACHYGQISMARLL--LDQSANVTVPKNFPSRXXXXXXXXXXXXX 1249
A V K PLH A G + + LL L +SA
Sbjct: 131 ASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSA------------------------ 166
Query: 1250 XYTNTTD-QGFTPLHHSAQQGHSTIVALLLDR 1280
N D QG+TPL H+ +GH LL+++
Sbjct: 167 --VNWQDKQGWTPLFHALAEGHGDAAVLLVEK 196
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 53/192 (27%), Positives = 86/192 (44%), Gaps = 11/192 (5%)
Query: 127 KVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKAPVDDVTVD 186
KV +L + L + G PLH + + ++ LL K V+ +DD D
Sbjct: 17 KVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVN------LDDYPDD 70
Query: 187 Y-LTALHVAAHCGHARVAKTLLDK--KADPNARALNGFTPLHIACKKNRIKVVELLLKHG 243
T H+A G+ V K+L D+ K D N G T LH+A K +V + L+++G
Sbjct: 71 SGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENG 130
Query: 244 ASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR--EPMLHIACKKNRIKV 301
AS+ + + LH A +K++ELL G S + + P+ H + +
Sbjct: 131 ASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAA 190
Query: 302 VELLLKHGASIE 313
V L+ K+GA +
Sbjct: 191 VLLVEKYGAEYD 202
Score = 57.4 bits (137), Expect = 5e-08, Method: Composition-based stats.
Identities = 49/185 (26%), Positives = 73/185 (39%), Gaps = 26/185 (14%)
Query: 1166 KNGLTPLHLCAQEDRVGVAELLLKNNAQV---DTPTKKGFTPLHIACHYGQISMARLLLD 1222
++G PLH + LL V D P G+TP HIAC G + + + L D
Sbjct: 34 QDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYD 93
Query: 1223 QSANVTVPKNFPSRXXXXXXXXXXXXXXYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGA 1282
+ + K T+QG T LH + + + L++ GA
Sbjct: 94 RPLKPDLNK----------------------ITNQGVTCLHLAVGKKWFEVSQFLIENGA 131
Query: 1283 SPNATNK-GFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMAR 1341
S +K PLH +A G ++ LL G S +G+TPL A G A
Sbjct: 132 SVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAV 191
Query: 1342 LLLDQ 1346
LL+++
Sbjct: 192 LLVEK 196
Score = 51.2 bits (121), Expect = 4e-06, Method: Composition-based stats.
Identities = 49/179 (27%), Positives = 74/179 (41%), Gaps = 18/179 (10%)
Query: 988 REQQTPLHIASRLGNVDIVMLLLQHGAAV---DSTTKDLYTALHIAAKEGQEEVAAVLLE 1044
++ + PLH + +I LL V D +T HIA G EV L +
Sbjct: 34 QDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYD 93
Query: 1045 N--GASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQ 1102
L T +G T LHL +V++ L++ A V + K PLH A+
Sbjct: 94 RPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSL 153
Query: 1103 NVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLE-HGAD 1160
+ LL G S N + G+TPL + +EGH D + +L+E +GA+
Sbjct: 154 KLIELLCGLGKS------------AVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAE 200
Score = 50.1 bits (118), Expect = 8e-06, Method: Composition-based stats.
Identities = 37/130 (28%), Positives = 57/130 (43%), Gaps = 5/130 (3%)
Query: 1258 GFTPLHHSAQQGHSTIVALLLDRGASPN----ATNKGFTPLHHSAQQGHSTIVALLLDRG 1313
G PLH S I + LL + + N + G+TP H + G+ +V L DR
Sbjct: 36 GRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRP 95
Query: 1314 ASPNATNKT-RGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTI 1372
P+ T +G T LH+A +++ L++ A+V PLH +A G +
Sbjct: 96 LKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKL 155
Query: 1373 VALLLDRGAS 1382
+ LL G S
Sbjct: 156 IELLCGLGKS 165
Score = 46.6 bits (109), Expect = 1e-04, Method: Composition-based stats.
Identities = 37/134 (27%), Positives = 58/134 (43%), Gaps = 6/134 (4%)
Query: 1261 PLHHSAQQGHSTIVALLLDRGASP--NATNKGFTPLHHSAQQGHSTIVALLLDRGASPNA 1318
PLH + + V LL S G PLH S I + LL + + N
Sbjct: 5 PLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNL 64
Query: 1319 TN--KTRGFTPLHIACHYGQISMARLLLDQ--SANVSCTTDQGFTPLHHSAQQGHSTIVA 1374
+ G+TP HIAC G + + + L D+ +++ T+QG T LH + + +
Sbjct: 65 DDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQ 124
Query: 1375 LLLDRGASPNATNK 1388
L++ GAS +K
Sbjct: 125 FLIENGASVRIKDK 138
Score = 45.4 bits (106), Expect = 2e-04, Method: Composition-based stats.
Identities = 51/195 (26%), Positives = 81/195 (41%), Gaps = 26/195 (13%)
Query: 1 IRWTHYWKLHKVTKYSQKVINTINPFGSHFQHNITPLHVAAKWGKANMVTLLLSRGANID 60
+ W+ ++ H++T + + +N TP H+A G +V L R D
Sbjct: 40 LHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPD 99
Query: 61 -NK-TRDGLTALHCAARSGHEAVIEMLLEQGAPISSKTKVRGFYILRS---GHEAVIEML 115
NK T G+T LH A V + L+E GA + K K + R+ G +IE+L
Sbjct: 100 LNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELL 159
Query: 116 LEQGAPISSKTKVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAP---- 171
G +++ K+G+TPL GH A LL++K
Sbjct: 160 CGLGK----------------SAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDL 203
Query: 172 VDFQGKAPVDDVTVD 186
VD +G A +DV ++
Sbjct: 204 VDNKG-AKAEDVALN 217
Score = 45.1 bits (105), Expect = 3e-04, Method: Composition-based stats.
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 10/199 (5%)
Query: 223 PLHIACKKNRIKVVELLLKHGAS--IEATTEVREPMLHIACKKNRIKVVELLLKHGASI- 279
PLH AC +N V+ LL S ++ + R P LH + ++ LL ++
Sbjct: 5 PLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIP-LHWSVSFQAHEITSFLLSKMENVN 63
Query: 280 --EATTEVREPMLHIACKKNRIKVVELLLKH--GASIEATTEVREPMLHIACKKNRIKVV 335
+ + HIAC ++VV+ L + T LH+A K +V
Sbjct: 64 LDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVS 123
Query: 336 ELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR--EPMLHIAC 393
+ L+++GAS+ + + LH A +K++ELL G S + + P+ H
Sbjct: 124 QFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALA 183
Query: 394 KKNRIKVVELLLKHGASIE 412
+ + V L+ K+GA +
Sbjct: 184 EGHGDAAVLLVEKYGAEYD 202
Score = 42.0 bits (97), Expect = 0.003, Method: Composition-based stats.
Identities = 48/198 (24%), Positives = 84/198 (42%), Gaps = 10/198 (5%)
Query: 257 LHIACKKNRIKVVELLLKHGASI--EATTEVREPMLHIACKKNRIKVVELLLKHGASI-- 312
LH AC +N V+ LL S+ + + R P LH + ++ LL ++
Sbjct: 6 LHQACMENEFFKVQELLHSKPSLLLQKDQDGRIP-LHWSVSFQAHEITSFLLSKMENVNL 64
Query: 313 -EATTEVREPMLHIACKKNRIKVVELLLKH--GASIEATTEVREPMLHIACKKNRIKVVE 369
+ + HIAC ++VV+ L + T LH+A K +V +
Sbjct: 65 DDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQ 124
Query: 370 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR--EPMLHIACK 427
L+++GAS+ + + LH A +K++ELL G S + + P+ H +
Sbjct: 125 FLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAE 184
Query: 428 KNRIKVVELLLKHGASIE 445
+ V L+ K+GA +
Sbjct: 185 GHGDAAVLLVEKYGAEYD 202
Score = 42.0 bits (97), Expect = 0.003, Method: Composition-based stats.
Identities = 48/198 (24%), Positives = 84/198 (42%), Gaps = 10/198 (5%)
Query: 323 LHIACKKNRIKVVELLLKHGASI--EATTEVREPMLHIACKKNRIKVVELLLKHGASI-- 378
LH AC +N V+ LL S+ + + R P LH + ++ LL ++
Sbjct: 6 LHQACMENEFFKVQELLHSKPSLLLQKDQDGRIP-LHWSVSFQAHEITSFLLSKMENVNL 64
Query: 379 -EATTEVREPMLHIACKKNRIKVVELLLKH--GASIEATTEVREPMLHIACKKNRIKVVE 435
+ + HIAC ++VV+ L + T LH+A K +V +
Sbjct: 65 DDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQ 124
Query: 436 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR--EPMLHIACK 493
L+++GAS+ + + LH A +K++ELL G S + + P+ H +
Sbjct: 125 FLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAE 184
Query: 494 KNRIKVVELLLKHGASIE 511
+ V L+ K+GA +
Sbjct: 185 GHGDAAVLLVEKYGAEYD 202
Score = 42.0 bits (97), Expect = 0.003, Method: Composition-based stats.
Identities = 48/198 (24%), Positives = 84/198 (42%), Gaps = 10/198 (5%)
Query: 389 LHIACKKNRIKVVELLLKHGASI--EATTEVREPMLHIACKKNRIKVVELLLKHGASI-- 444
LH AC +N V+ LL S+ + + R P LH + ++ LL ++
Sbjct: 6 LHQACMENEFFKVQELLHSKPSLLLQKDQDGRIP-LHWSVSFQAHEITSFLLSKMENVNL 64
Query: 445 -EATTEVREPMLHIACKKNRIKVVELLLKH--GASIEATTEVREPMLHIACKKNRIKVVE 501
+ + HIAC ++VV+ L + T LH+A K +V +
Sbjct: 65 DDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQ 124
Query: 502 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR--EPMLHIACK 559
L+++GAS+ + + LH A +K++ELL G S + + P+ H +
Sbjct: 125 FLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAE 184
Query: 560 KNRIKVVELLLKHGASIE 577
+ V L+ K+GA +
Sbjct: 185 GHGDAAVLLVEKYGAEYD 202
Score = 42.0 bits (97), Expect = 0.003, Method: Composition-based stats.
Identities = 48/198 (24%), Positives = 84/198 (42%), Gaps = 10/198 (5%)
Query: 455 LHIACKKNRIKVVELLLKHGASI--EATTEVREPMLHIACKKNRIKVVELLLKHGASI-- 510
LH AC +N V+ LL S+ + + R P LH + ++ LL ++
Sbjct: 6 LHQACMENEFFKVQELLHSKPSLLLQKDQDGRIP-LHWSVSFQAHEITSFLLSKMENVNL 64
Query: 511 -EATTEVREPMLHIACKKNRIKVVELLLKH--GASIEATTEVREPMLHIACKKNRIKVVE 567
+ + HIAC ++VV+ L + T LH+A K +V +
Sbjct: 65 DDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQ 124
Query: 568 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR--EPMLHIACK 625
L+++GAS+ + + LH A +K++ELL G S + + P+ H +
Sbjct: 125 FLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAE 184
Query: 626 KNRIKVVELLLKHGASIE 643
+ V L+ K+GA +
Sbjct: 185 GHGDAAVLLVEKYGAEYD 202
Score = 42.0 bits (97), Expect = 0.003, Method: Composition-based stats.
Identities = 48/198 (24%), Positives = 84/198 (42%), Gaps = 10/198 (5%)
Query: 521 LHIACKKNRIKVVELLLKHGASI--EATTEVREPMLHIACKKNRIKVVELLLKHGASI-- 576
LH AC +N V+ LL S+ + + R P LH + ++ LL ++
Sbjct: 6 LHQACMENEFFKVQELLHSKPSLLLQKDQDGRIP-LHWSVSFQAHEITSFLLSKMENVNL 64
Query: 577 -EATTEVREPMLHIACKKNRIKVVELLLKH--GASIEATTEVREPMLHIACKKNRIKVVE 633
+ + HIAC ++VV+ L + T LH+A K +V +
Sbjct: 65 DDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQ 124
Query: 634 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR--EPMLHIACK 691
L+++GAS+ + + LH A +K++ELL G S + + P+ H +
Sbjct: 125 FLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAE 184
Query: 692 KNRIKVVELLLKHGASIE 709
+ V L+ K+GA +
Sbjct: 185 GHGDAAVLLVEKYGAEYD 202
Score = 42.0 bits (97), Expect = 0.003, Method: Composition-based stats.
Identities = 48/198 (24%), Positives = 84/198 (42%), Gaps = 10/198 (5%)
Query: 587 LHIACKKNRIKVVELLLKHGASI--EATTEVREPMLHIACKKNRIKVVELLLKHGASI-- 642
LH AC +N V+ LL S+ + + R P LH + ++ LL ++
Sbjct: 6 LHQACMENEFFKVQELLHSKPSLLLQKDQDGRIP-LHWSVSFQAHEITSFLLSKMENVNL 64
Query: 643 -EATTEVREPMLHIACKKNRIKVVELLLKH--GASIEATTEVREPMLHIACKKNRIKVVE 699
+ + HIAC ++VV+ L + T LH+A K +V +
Sbjct: 65 DDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQ 124
Query: 700 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR--EPMLHIACK 757
L+++GAS+ + + LH A +K++ELL G S + + P+ H +
Sbjct: 125 FLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAE 184
Query: 758 KNRIKVVELLLKHGASIE 775
+ V L+ K+GA +
Sbjct: 185 GHGDAAVLLVEKYGAEYD 202
Score = 42.0 bits (97), Expect = 0.003, Method: Composition-based stats.
Identities = 48/198 (24%), Positives = 84/198 (42%), Gaps = 10/198 (5%)
Query: 653 LHIACKKNRIKVVELLLKHGASI--EATTEVREPMLHIACKKNRIKVVELLLKHGASI-- 708
LH AC +N V+ LL S+ + + R P LH + ++ LL ++
Sbjct: 6 LHQACMENEFFKVQELLHSKPSLLLQKDQDGRIP-LHWSVSFQAHEITSFLLSKMENVNL 64
Query: 709 -EATTEVREPMLHIACKKNRIKVVELLLKH--GASIEATTEVREPMLHIACKKNRIKVVE 765
+ + HIAC ++VV+ L + T LH+A K +V +
Sbjct: 65 DDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQ 124
Query: 766 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR--EPMLHIACK 823
L+++GAS+ + + LH A +K++ELL G S + + P+ H +
Sbjct: 125 FLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAE 184
Query: 824 KNRIKVVELLLKHGASIE 841
+ V L+ K+GA +
Sbjct: 185 GHGDAAVLLVEKYGAEYD 202
Score = 40.4 bits (93), Expect = 0.008, Method: Composition-based stats.
Identities = 41/162 (25%), Positives = 70/162 (43%), Gaps = 8/162 (4%)
Query: 785 LHIACKKNRIKVVELLLKHGASI--EATTEVREPMLHIACKKNRIKVVELLLKHGASI-- 840
LH AC +N V+ LL S+ + + R P LH + ++ LL ++
Sbjct: 6 LHQACMENEFFKVQELLHSKPSLLLQKDQDGRIP-LHWSVSFQAHEITSFLLSKMENVNL 64
Query: 841 -EATTEVREPMLHIACKKNRIKVVELLLKH--GASIEATTEVREPMLHIACKKNRIKVVE 897
+ + HIAC ++VV+ L + T LH+A K +V +
Sbjct: 65 DDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQ 124
Query: 898 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASS 939
L+++GAS+ + + LH A +K++ELL G S+
Sbjct: 125 FLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSA 166
>pdb|1WG0|A Chain A, Structural Comparison Of Nas6p Protein Structures In Two
Different Crystal Forms
Length = 243
Score = 70.1 bits (170), Expect = 8e-12, Method: Composition-based stats.
Identities = 60/215 (27%), Positives = 94/215 (43%), Gaps = 29/215 (13%)
Query: 1171 PLH-LCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTV 1229
PLH C + + V ELL + + + G PLH + + + LL + NV +
Sbjct: 5 PLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNL 64
Query: 1230 PKNFPSRXXXXXXXXXXXXXXYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPN---A 1286
++P D G+TP H + G+ +V L DR P+
Sbjct: 65 -DDYPD--------------------DSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKI 103
Query: 1287 TNKGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLL--L 1344
TN+G T LH + + + L++ GAS +K PLH A G + + LL L
Sbjct: 104 TNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQI-PLHRAASVGSLKLIELLCGL 162
Query: 1345 DQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDR 1379
+SA V+ QG+TPL H+ +GH LL+++
Sbjct: 163 GKSA-VNWQDKQGWTPLFHALAEGHGDAAVLLVEK 196
Score = 68.9 bits (167), Expect = 2e-11, Method: Composition-based stats.
Identities = 58/148 (39%), Positives = 76/148 (51%), Gaps = 11/148 (7%)
Query: 992 TPLHIASRLGNVDIVMLLLQHGAAVD--STTKDLYTALHIAAKEGQEEVAAVLLENGASL 1049
TP HIA +GN+++V L D T T LH+A + EV+ L+ENGAS+
Sbjct: 74 TPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASV 133
Query: 1050 TSTTKKGFTPLHLTGKYGHIKVAKLL--LQKDAPVDFQGKNGVTPLHVASHYDHQNVALL 1107
K PLH G +K+ +LL L K A V++Q K G TPL A H + A+L
Sbjct: 134 RIKDKFNQIPLHRAASVGSLKLIELLCGLGKSA-VNWQDKQGWTPLFHALAEGHGDAAVL 192
Query: 1108 LLEK-GASMDIATTLLEYGAKPNAESVA 1134
L+EK GA D+ GAK AE VA
Sbjct: 193 LVEKYGAEYDLVDN---KGAK--AEDVA 215
Score = 58.9 bits (141), Expect = 2e-08, Method: Composition-based stats.
Identities = 54/212 (25%), Positives = 89/212 (41%), Gaps = 48/212 (22%)
Query: 1074 LLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESV 1133
LLLQKD ++G PLH + + + LL K ++++ +
Sbjct: 28 LLLQKD-------QDGRIPLHWSVSFQAHEITSFLLSKMENVNL----------DDYPDD 70
Query: 1134 AGFTPLHLSASEGHADMSAMLLEH--GADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNN 1191
+G+TP H++ S G+ ++ L + D++ G+T LHL + V++ L++N
Sbjct: 71 SGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENG 130
Query: 1192 AQVDTPTKKGFTPLHIACHYGQISMARLL--LDQSANVTVPKNFPSRXXXXXXXXXXXXX 1249
A V K PLH A G + + LL L +SA
Sbjct: 131 ASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSA------------------------ 166
Query: 1250 XYTNTTD-QGFTPLHHSAQQGHSTIVALLLDR 1280
N D QG+TPL H+ +GH LL+++
Sbjct: 167 --VNWQDKQGWTPLFHALAEGHGDAAVLLVEK 196
Score = 58.9 bits (141), Expect = 2e-08, Method: Composition-based stats.
Identities = 53/192 (27%), Positives = 86/192 (44%), Gaps = 11/192 (5%)
Query: 127 KVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKAPVDDVTVD 186
KV +L + L + G PLH + + ++ LL K V+ +DD D
Sbjct: 17 KVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVN------LDDYPDD 70
Query: 187 Y-LTALHVAAHCGHARVAKTLLDK--KADPNARALNGFTPLHIACKKNRIKVVELLLKHG 243
T H+A G+ V K+L D+ K D N G T LH+A K +V + L+++G
Sbjct: 71 SGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENG 130
Query: 244 ASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR--EPMLHIACKKNRIKV 301
AS+ + + LH A +K++ELL G S + + P+ H + +
Sbjct: 131 ASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAA 190
Query: 302 VELLLKHGASIE 313
V L+ K+GA +
Sbjct: 191 VLLVEKYGAEYD 202
Score = 57.0 bits (136), Expect = 7e-08, Method: Composition-based stats.
Identities = 49/185 (26%), Positives = 73/185 (39%), Gaps = 26/185 (14%)
Query: 1166 KNGLTPLHLCAQEDRVGVAELLLKNNAQV---DTPTKKGFTPLHIACHYGQISMARLLLD 1222
++G PLH + LL V D P G+TP HIAC G + + + L D
Sbjct: 34 QDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYD 93
Query: 1223 QSANVTVPKNFPSRXXXXXXXXXXXXXXYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGA 1282
+ + K T+QG T LH + + + L++ GA
Sbjct: 94 RPLKPDLNK----------------------ITNQGVTCLHLAVGKKWFEVSQFLIENGA 131
Query: 1283 SPNATNK-GFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMAR 1341
S +K PLH +A G ++ LL G S +G+TPL A G A
Sbjct: 132 SVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAV 191
Query: 1342 LLLDQ 1346
LL+++
Sbjct: 192 LLVEK 196
Score = 49.7 bits (117), Expect = 1e-05, Method: Composition-based stats.
Identities = 37/130 (28%), Positives = 57/130 (43%), Gaps = 5/130 (3%)
Query: 1258 GFTPLHHSAQQGHSTIVALLLDRGASPN----ATNKGFTPLHHSAQQGHSTIVALLLDRG 1313
G PLH S I + LL + + N + G+TP H + G+ +V L DR
Sbjct: 36 GRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRP 95
Query: 1314 ASPNATNKT-RGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTI 1372
P+ T +G T LH+A +++ L++ A+V PLH +A G +
Sbjct: 96 LKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKL 155
Query: 1373 VALLLDRGAS 1382
+ LL G S
Sbjct: 156 IELLCGLGKS 165
Score = 46.2 bits (108), Expect = 1e-04, Method: Composition-based stats.
Identities = 37/134 (27%), Positives = 58/134 (43%), Gaps = 6/134 (4%)
Query: 1261 PLHHSAQQGHSTIVALLLDRGASP--NATNKGFTPLHHSAQQGHSTIVALLLDRGASPNA 1318
PLH + + V LL S G PLH S I + LL + + N
Sbjct: 5 PLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNL 64
Query: 1319 TN--KTRGFTPLHIACHYGQISMARLLLDQ--SANVSCTTDQGFTPLHHSAQQGHSTIVA 1374
+ G+TP HIAC G + + + L D+ +++ T+QG T LH + + +
Sbjct: 65 DDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQ 124
Query: 1375 LLLDRGASPNATNK 1388
L++ GAS +K
Sbjct: 125 FLIENGASVRIKDK 138
Score = 45.1 bits (105), Expect = 3e-04, Method: Composition-based stats.
Identities = 51/195 (26%), Positives = 81/195 (41%), Gaps = 26/195 (13%)
Query: 1 IRWTHYWKLHKVTKYSQKVINTINPFGSHFQHNITPLHVAAKWGKANMVTLLLSRGANID 60
+ W+ ++ H++T + + +N TP H+A G +V L R D
Sbjct: 40 LHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPD 99
Query: 61 -NK-TRDGLTALHCAARSGHEAVIEMLLEQGAPISSKTKVRGFYILRS---GHEAVIEML 115
NK T G+T LH A V + L+E GA + K K + R+ G +IE+L
Sbjct: 100 LNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELL 159
Query: 116 LEQGAPISSKTKVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAP---- 171
G +++ K+G+TPL GH A LL++K
Sbjct: 160 CGLGK----------------SAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDL 203
Query: 172 VDFQGKAPVDDVTVD 186
VD +G A +DV ++
Sbjct: 204 VDNKG-AKAEDVALN 217
Score = 44.7 bits (104), Expect = 4e-04, Method: Composition-based stats.
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 10/199 (5%)
Query: 223 PLHIACKKNRIKVVELLLKHGAS--IEATTEVREPMLHIACKKNRIKVVELLLKHGASI- 279
PLH AC +N V+ LL S ++ + R P LH + ++ LL ++
Sbjct: 5 PLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIP-LHWSVSFQAHEITSFLLSKMENVN 63
Query: 280 --EATTEVREPMLHIACKKNRIKVVELLLKH--GASIEATTEVREPMLHIACKKNRIKVV 335
+ + HIAC ++VV+ L + T LH+A K +V
Sbjct: 64 LDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVS 123
Query: 336 ELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR--EPMLHIAC 393
+ L+++GAS+ + + LH A +K++ELL G S + + P+ H
Sbjct: 124 QFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALA 183
Query: 394 KKNRIKVVELLLKHGASIE 412
+ + V L+ K+GA +
Sbjct: 184 EGHGDAAVLLVEKYGAEYD 202
Score = 41.6 bits (96), Expect = 0.003, Method: Composition-based stats.
Identities = 48/198 (24%), Positives = 84/198 (42%), Gaps = 10/198 (5%)
Query: 257 LHIACKKNRIKVVELLLKHGASI--EATTEVREPMLHIACKKNRIKVVELLLKHGASI-- 312
LH AC +N V+ LL S+ + + R P LH + ++ LL ++
Sbjct: 6 LHQACMENEFFKVQELLHSKPSLLLQKDQDGRIP-LHWSVSFQAHEITSFLLSKMENVNL 64
Query: 313 -EATTEVREPMLHIACKKNRIKVVELLLKH--GASIEATTEVREPMLHIACKKNRIKVVE 369
+ + HIAC ++VV+ L + T LH+A K +V +
Sbjct: 65 DDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQ 124
Query: 370 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR--EPMLHIACK 427
L+++GAS+ + + LH A +K++ELL G S + + P+ H +
Sbjct: 125 FLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAE 184
Query: 428 KNRIKVVELLLKHGASIE 445
+ V L+ K+GA +
Sbjct: 185 GHGDAAVLLVEKYGAEYD 202
Score = 41.6 bits (96), Expect = 0.003, Method: Composition-based stats.
Identities = 48/198 (24%), Positives = 84/198 (42%), Gaps = 10/198 (5%)
Query: 323 LHIACKKNRIKVVELLLKHGASI--EATTEVREPMLHIACKKNRIKVVELLLKHGASI-- 378
LH AC +N V+ LL S+ + + R P LH + ++ LL ++
Sbjct: 6 LHQACMENEFFKVQELLHSKPSLLLQKDQDGRIP-LHWSVSFQAHEITSFLLSKMENVNL 64
Query: 379 -EATTEVREPMLHIACKKNRIKVVELLLKH--GASIEATTEVREPMLHIACKKNRIKVVE 435
+ + HIAC ++VV+ L + T LH+A K +V +
Sbjct: 65 DDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQ 124
Query: 436 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR--EPMLHIACK 493
L+++GAS+ + + LH A +K++ELL G S + + P+ H +
Sbjct: 125 FLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAE 184
Query: 494 KNRIKVVELLLKHGASIE 511
+ V L+ K+GA +
Sbjct: 185 GHGDAAVLLVEKYGAEYD 202
Score = 41.6 bits (96), Expect = 0.003, Method: Composition-based stats.
Identities = 48/198 (24%), Positives = 84/198 (42%), Gaps = 10/198 (5%)
Query: 389 LHIACKKNRIKVVELLLKHGASI--EATTEVREPMLHIACKKNRIKVVELLLKHGASI-- 444
LH AC +N V+ LL S+ + + R P LH + ++ LL ++
Sbjct: 6 LHQACMENEFFKVQELLHSKPSLLLQKDQDGRIP-LHWSVSFQAHEITSFLLSKMENVNL 64
Query: 445 -EATTEVREPMLHIACKKNRIKVVELLLKH--GASIEATTEVREPMLHIACKKNRIKVVE 501
+ + HIAC ++VV+ L + T LH+A K +V +
Sbjct: 65 DDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQ 124
Query: 502 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR--EPMLHIACK 559
L+++GAS+ + + LH A +K++ELL G S + + P+ H +
Sbjct: 125 FLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAE 184
Query: 560 KNRIKVVELLLKHGASIE 577
+ V L+ K+GA +
Sbjct: 185 GHGDAAVLLVEKYGAEYD 202
Score = 41.6 bits (96), Expect = 0.003, Method: Composition-based stats.
Identities = 48/198 (24%), Positives = 84/198 (42%), Gaps = 10/198 (5%)
Query: 455 LHIACKKNRIKVVELLLKHGASI--EATTEVREPMLHIACKKNRIKVVELLLKHGASI-- 510
LH AC +N V+ LL S+ + + R P LH + ++ LL ++
Sbjct: 6 LHQACMENEFFKVQELLHSKPSLLLQKDQDGRIP-LHWSVSFQAHEITSFLLSKMENVNL 64
Query: 511 -EATTEVREPMLHIACKKNRIKVVELLLKH--GASIEATTEVREPMLHIACKKNRIKVVE 567
+ + HIAC ++VV+ L + T LH+A K +V +
Sbjct: 65 DDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQ 124
Query: 568 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR--EPMLHIACK 625
L+++GAS+ + + LH A +K++ELL G S + + P+ H +
Sbjct: 125 FLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAE 184
Query: 626 KNRIKVVELLLKHGASIE 643
+ V L+ K+GA +
Sbjct: 185 GHGDAAVLLVEKYGAEYD 202
Score = 41.6 bits (96), Expect = 0.003, Method: Composition-based stats.
Identities = 48/198 (24%), Positives = 84/198 (42%), Gaps = 10/198 (5%)
Query: 521 LHIACKKNRIKVVELLLKHGASI--EATTEVREPMLHIACKKNRIKVVELLLKHGASI-- 576
LH AC +N V+ LL S+ + + R P LH + ++ LL ++
Sbjct: 6 LHQACMENEFFKVQELLHSKPSLLLQKDQDGRIP-LHWSVSFQAHEITSFLLSKMENVNL 64
Query: 577 -EATTEVREPMLHIACKKNRIKVVELLLKH--GASIEATTEVREPMLHIACKKNRIKVVE 633
+ + HIAC ++VV+ L + T LH+A K +V +
Sbjct: 65 DDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQ 124
Query: 634 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR--EPMLHIACK 691
L+++GAS+ + + LH A +K++ELL G S + + P+ H +
Sbjct: 125 FLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAE 184
Query: 692 KNRIKVVELLLKHGASIE 709
+ V L+ K+GA +
Sbjct: 185 GHGDAAVLLVEKYGAEYD 202
Score = 41.6 bits (96), Expect = 0.003, Method: Composition-based stats.
Identities = 48/198 (24%), Positives = 84/198 (42%), Gaps = 10/198 (5%)
Query: 587 LHIACKKNRIKVVELLLKHGASI--EATTEVREPMLHIACKKNRIKVVELLLKHGASI-- 642
LH AC +N V+ LL S+ + + R P LH + ++ LL ++
Sbjct: 6 LHQACMENEFFKVQELLHSKPSLLLQKDQDGRIP-LHWSVSFQAHEITSFLLSKMENVNL 64
Query: 643 -EATTEVREPMLHIACKKNRIKVVELLLKH--GASIEATTEVREPMLHIACKKNRIKVVE 699
+ + HIAC ++VV+ L + T LH+A K +V +
Sbjct: 65 DDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQ 124
Query: 700 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR--EPMLHIACK 757
L+++GAS+ + + LH A +K++ELL G S + + P+ H +
Sbjct: 125 FLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAE 184
Query: 758 KNRIKVVELLLKHGASIE 775
+ V L+ K+GA +
Sbjct: 185 GHGDAAVLLVEKYGAEYD 202
Score = 41.6 bits (96), Expect = 0.003, Method: Composition-based stats.
Identities = 48/198 (24%), Positives = 84/198 (42%), Gaps = 10/198 (5%)
Query: 653 LHIACKKNRIKVVELLLKHGASI--EATTEVREPMLHIACKKNRIKVVELLLKHGASI-- 708
LH AC +N V+ LL S+ + + R P LH + ++ LL ++
Sbjct: 6 LHQACMENEFFKVQELLHSKPSLLLQKDQDGRIP-LHWSVSFQAHEITSFLLSKMENVNL 64
Query: 709 -EATTEVREPMLHIACKKNRIKVVELLLKH--GASIEATTEVREPMLHIACKKNRIKVVE 765
+ + HIAC ++VV+ L + T LH+A K +V +
Sbjct: 65 DDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQ 124
Query: 766 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR--EPMLHIACK 823
L+++GAS+ + + LH A +K++ELL G S + + P+ H +
Sbjct: 125 FLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAE 184
Query: 824 KNRIKVVELLLKHGASIE 841
+ V L+ K+GA +
Sbjct: 185 GHGDAAVLLVEKYGAEYD 202
Score = 40.0 bits (92), Expect = 0.010, Method: Composition-based stats.
Identities = 41/162 (25%), Positives = 70/162 (43%), Gaps = 8/162 (4%)
Query: 785 LHIACKKNRIKVVELLLKHGASI--EATTEVREPMLHIACKKNRIKVVELLLKHGASI-- 840
LH AC +N V+ LL S+ + + R P LH + ++ LL ++
Sbjct: 6 LHQACMENEFFKVQELLHSKPSLLLQKDQDGRIP-LHWSVSFQAHEITSFLLSKMENVNL 64
Query: 841 -EATTEVREPMLHIACKKNRIKVVELLLKH--GASIEATTEVREPMLHIACKKNRIKVVE 897
+ + HIAC ++VV+ L + T LH+A K +V +
Sbjct: 65 DDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQ 124
Query: 898 LLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASS 939
L+++GAS+ + + LH A +K++ELL G S+
Sbjct: 125 FLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSA 166
>pdb|1OT8|A Chain A, Structure Of The Ankyrin Domain Of The Drosophila Notch
Receptor
pdb|1OT8|B Chain B, Structure Of The Ankyrin Domain Of The Drosophila Notch
Receptor
pdb|1OT8|C Chain C, Structure Of The Ankyrin Domain Of The Drosophila Notch
Receptor
Length = 239
Score = 67.8 bits (164), Expect = 4e-11, Method: Composition-based stats.
Identities = 65/196 (33%), Positives = 87/196 (44%), Gaps = 13/196 (6%)
Query: 1032 KEGQEEVAAVLLENGASLTSTT-KKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGV 1090
++ +V + LL GA L +T K G T LHL ++ AK LL A + Q G
Sbjct: 26 EDSTAQVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGR 85
Query: 1091 TPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADM 1150
TPLH A D V +LL + AT L NA G TPL L+A M
Sbjct: 86 TPLHAAVAADAMGVFQILLR-----NRATNL-------NARMHDGTTPLILAARLAIEGM 133
Query: 1151 SAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACH 1210
L+ AD++ A +G T LH A + +LL ++A D K TPL +A
Sbjct: 134 VEDLITADADINAADNSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAR 193
Query: 1211 YGQISMARLLLDQSAN 1226
G ++ LLD AN
Sbjct: 194 EGSYEASKALLDNFAN 209
Score = 57.0 bits (136), Expect = 7e-08, Method: Composition-based stats.
Identities = 66/223 (29%), Positives = 100/223 (44%), Gaps = 16/223 (7%)
Query: 124 SKTKVAAVLLENGASLTSTT-KKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQ---GKAP 179
S +V + LL GA L +T K G T LHL ++ AK LL A + Q G+ P
Sbjct: 28 STAQVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTP 87
Query: 180 VDDVTVDYLTALHVAAHCGHARVAKTLLDKKA-DPNARALNGFTPLHIACKKNRIKVVEL 238
LH A V + LL +A + NAR +G TPL +A + +VE
Sbjct: 88 -----------LHAAVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVED 136
Query: 239 LLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNR 298
L+ A I A + LH A N + V +LL H A+ +A + E L +A ++
Sbjct: 137 LITADADINAADNSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGS 196
Query: 299 IKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 341
+ + LL + A+ E T + +A ++ +V LL +H
Sbjct: 197 YEASKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 239
Score = 56.6 bits (135), Expect = 9e-08, Method: Composition-based stats.
Identities = 56/187 (29%), Positives = 91/187 (48%), Gaps = 1/187 (0%)
Query: 189 TALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGAS-IE 247
T+LH+AA A AK LLD AD N++ G TPLH A + + V ++LL++ A+ +
Sbjct: 53 TSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAAVAADAMGVFQILLRNRATNLN 112
Query: 248 ATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 307
A L +A + +VE L+ A I A + LH A N + V +LL
Sbjct: 113 ARMHDGTTPLILAARLAIEGMVEDLITADADINAADNSGKTALHWAAAVNNTEAVNILLM 172
Query: 308 HGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKV 367
H A+ +A + E L +A ++ + + LL + A+ E T + +A ++ +
Sbjct: 173 HHANRDAQDDKDETPLFLAAREGSYEASKALLDNFANREITDHMDRLPRDVASERLHHDI 232
Query: 368 VELLLKH 374
V LL +H
Sbjct: 233 VRLLDEH 239
Score = 53.5 bits (127), Expect = 8e-07, Method: Composition-based stats.
Identities = 72/259 (27%), Positives = 107/259 (41%), Gaps = 41/259 (15%)
Query: 1135 GFTPLHLSASEG---------------HADMSAMLLEHGADVSHAA-KNGLTPLHLCAQE 1178
G TPL ++A G A + + LL GA+++ K G T LHL A+
Sbjct: 2 GLTPLMIAAVRGGGLDTGEDIENNEDSTAQVISDLLAQGAELNATMDKTGETSLHLAARF 61
Query: 1179 DRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRXX 1238
R A+ LL A ++ G TPLH A + + ++LL A N +R
Sbjct: 62 ARADAAKRLLDAGADANSQDNTGRTPLHAAVAADAMGVFQILLRNRAT-----NLNARMH 116
Query: 1239 XXXXXXXXXXXXYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNAT-NKGFTPLHHS 1297
G TPL +A+ +V L+ A NA N G T LH +
Sbjct: 117 ------------------DGTTPLILAARLAIEGMVEDLITADADINAADNSGKTALHWA 158
Query: 1298 AQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQG 1357
A ++ V +LL A+ +A + + TPL +A G ++ LLD AN T
Sbjct: 159 AAVNNTEAVNILLMHHANRDAQDD-KDETPLFLAAREGSYEASKALLDNFANREITDHMD 217
Query: 1358 FTPLHHSAQQGHSTIVALL 1376
P ++++ H IV LL
Sbjct: 218 RLPRDVASERLHHDIVRLL 236
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 60/219 (27%), Positives = 92/219 (42%), Gaps = 13/219 (5%)
Query: 894 KVVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASSHVVSCYSNVKVHV 952
+V+ LL GA + AT + E LH+A + R + LL GA ++ +H
Sbjct: 31 QVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHA 90
Query: 953 SLN-KIQDVSSSILRLATCDVLPQCETRLNFSNLRVREQQTPLHIASRLGNVDIVMLLLQ 1011
++ V +LR R N R+ + TPL +A+RL +V L+
Sbjct: 91 AVAADAMGVFQILLR-----------NRATNLNARMHDGTTPLILAARLAIEGMVEDLIT 139
Query: 1012 HGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKV 1071
A +++ TALH AA E +LL + A+ + K TPL L + G +
Sbjct: 140 ADADINAADNSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEA 199
Query: 1072 AKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLE 1110
+K LL A + P VAS H ++ LL E
Sbjct: 200 SKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDE 238
Score = 49.7 bits (117), Expect = 1e-05, Method: Composition-based stats.
Identities = 61/238 (25%), Positives = 102/238 (42%), Gaps = 17/238 (7%)
Query: 220 GFTPLHIAC---------------KKNRIKVVELLLKHGASIEATTE-VREPMLHIACKK 263
G TPL IA + + +V+ LL GA + AT + E LH+A +
Sbjct: 2 GLTPLMIAAVRGGGLDTGEDIENNEDSTAQVISDLLAQGAELNATMDKTGETSLHLAARF 61
Query: 264 NRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGAS-IEATTEVREPM 322
R + LL GA + LH A + + V ++LL++ A+ + A
Sbjct: 62 ARADAAKRLLDAGADANSQDNTGRTPLHAAVAADAMGVFQILLRNRATNLNARMHDGTTP 121
Query: 323 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 382
L +A + +VE L+ A I A + LH A N + V +LL H A+ +A
Sbjct: 122 LILAARLAIEGMVEDLITADADINAADNSGKTALHWAAAVNNTEAVNILLMHHANRDAQD 181
Query: 383 EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 440
+ E L +A ++ + + LL + A+ E T + +A ++ +V LL +H
Sbjct: 182 DKDETPLFLAAREGSYEASKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 239
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 2/209 (0%)
Query: 267 KVVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHI 325
+V+ LL GA + AT + E LH+A + R + LL GA + LH
Sbjct: 31 QVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHA 90
Query: 326 ACKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEV 384
A + + V ++LL++ A+ + A L +A + +VE L+ A I A
Sbjct: 91 AVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNS 150
Query: 385 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 444
+ LH A N + V +LL H A+ +A + E L +A ++ + + LL + A+
Sbjct: 151 GKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFANR 210
Query: 445 EATTEVREPMLHIACKKNRIKVVELLLKH 473
E T + +A ++ +V LL +H
Sbjct: 211 EITDHMDRLPRDVASERLHHDIVRLLDEH 239
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 2/209 (0%)
Query: 300 KVVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHI 358
+V+ LL GA + AT + E LH+A + R + LL GA + LH
Sbjct: 31 QVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHA 90
Query: 359 ACKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEV 417
A + + V ++LL++ A+ + A L +A + +VE L+ A I A
Sbjct: 91 AVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNS 150
Query: 418 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 477
+ LH A N + V +LL H A+ +A + E L +A ++ + + LL + A+
Sbjct: 151 GKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFANR 210
Query: 478 EATTEVREPMLHIACKKNRIKVVELLLKH 506
E T + +A ++ +V LL +H
Sbjct: 211 EITDHMDRLPRDVASERLHHDIVRLLDEH 239
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 2/209 (0%)
Query: 333 KVVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHI 391
+V+ LL GA + AT + E LH+A + R + LL GA + LH
Sbjct: 31 QVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHA 90
Query: 392 ACKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEV 450
A + + V ++LL++ A+ + A L +A + +VE L+ A I A
Sbjct: 91 AVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNS 150
Query: 451 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 510
+ LH A N + V +LL H A+ +A + E L +A ++ + + LL + A+
Sbjct: 151 GKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFANR 210
Query: 511 EATTEVREPMLHIACKKNRIKVVELLLKH 539
E T + +A ++ +V LL +H
Sbjct: 211 EITDHMDRLPRDVASERLHHDIVRLLDEH 239
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 2/209 (0%)
Query: 366 KVVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHI 424
+V+ LL GA + AT + E LH+A + R + LL GA + LH
Sbjct: 31 QVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHA 90
Query: 425 ACKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEV 483
A + + V ++LL++ A+ + A L +A + +VE L+ A I A
Sbjct: 91 AVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNS 150
Query: 484 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 543
+ LH A N + V +LL H A+ +A + E L +A ++ + + LL + A+
Sbjct: 151 GKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFANR 210
Query: 544 EATTEVREPMLHIACKKNRIKVVELLLKH 572
E T + +A ++ +V LL +H
Sbjct: 211 EITDHMDRLPRDVASERLHHDIVRLLDEH 239
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 2/209 (0%)
Query: 399 KVVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHI 457
+V+ LL GA + AT + E LH+A + R + LL GA + LH
Sbjct: 31 QVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHA 90
Query: 458 ACKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEV 516
A + + V ++LL++ A+ + A L +A + +VE L+ A I A
Sbjct: 91 AVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNS 150
Query: 517 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 576
+ LH A N + V +LL H A+ +A + E L +A ++ + + LL + A+
Sbjct: 151 GKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFANR 210
Query: 577 EATTEVREPMLHIACKKNRIKVVELLLKH 605
E T + +A ++ +V LL +H
Sbjct: 211 EITDHMDRLPRDVASERLHHDIVRLLDEH 239
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 2/209 (0%)
Query: 432 KVVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHI 490
+V+ LL GA + AT + E LH+A + R + LL GA + LH
Sbjct: 31 QVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHA 90
Query: 491 ACKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEV 549
A + + V ++LL++ A+ + A L +A + +VE L+ A I A
Sbjct: 91 AVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNS 150
Query: 550 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 609
+ LH A N + V +LL H A+ +A + E L +A ++ + + LL + A+
Sbjct: 151 GKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFANR 210
Query: 610 EATTEVREPMLHIACKKNRIKVVELLLKH 638
E T + +A ++ +V LL +H
Sbjct: 211 EITDHMDRLPRDVASERLHHDIVRLLDEH 239
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 2/209 (0%)
Query: 465 KVVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHI 523
+V+ LL GA + AT + E LH+A + R + LL GA + LH
Sbjct: 31 QVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHA 90
Query: 524 ACKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEV 582
A + + V ++LL++ A+ + A L +A + +VE L+ A I A
Sbjct: 91 AVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNS 150
Query: 583 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 642
+ LH A N + V +LL H A+ +A + E L +A ++ + + LL + A+
Sbjct: 151 GKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFANR 210
Query: 643 EATTEVREPMLHIACKKNRIKVVELLLKH 671
E T + +A ++ +V LL +H
Sbjct: 211 EITDHMDRLPRDVASERLHHDIVRLLDEH 239
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 2/209 (0%)
Query: 498 KVVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHI 556
+V+ LL GA + AT + E LH+A + R + LL GA + LH
Sbjct: 31 QVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHA 90
Query: 557 ACKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEV 615
A + + V ++LL++ A+ + A L +A + +VE L+ A I A
Sbjct: 91 AVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNS 150
Query: 616 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 675
+ LH A N + V +LL H A+ +A + E L +A ++ + + LL + A+
Sbjct: 151 GKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFANR 210
Query: 676 EATTEVREPMLHIACKKNRIKVVELLLKH 704
E T + +A ++ +V LL +H
Sbjct: 211 EITDHMDRLPRDVASERLHHDIVRLLDEH 239
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 2/209 (0%)
Query: 531 KVVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHI 589
+V+ LL GA + AT + E LH+A + R + LL GA + LH
Sbjct: 31 QVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHA 90
Query: 590 ACKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEV 648
A + + V ++LL++ A+ + A L +A + +VE L+ A I A
Sbjct: 91 AVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNS 150
Query: 649 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 708
+ LH A N + V +LL H A+ +A + E L +A ++ + + LL + A+
Sbjct: 151 GKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFANR 210
Query: 709 EATTEVREPMLHIACKKNRIKVVELLLKH 737
E T + +A ++ +V LL +H
Sbjct: 211 EITDHMDRLPRDVASERLHHDIVRLLDEH 239
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 2/209 (0%)
Query: 564 KVVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHI 622
+V+ LL GA + AT + E LH+A + R + LL GA + LH
Sbjct: 31 QVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHA 90
Query: 623 ACKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEV 681
A + + V ++LL++ A+ + A L +A + +VE L+ A I A
Sbjct: 91 AVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNS 150
Query: 682 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 741
+ LH A N + V +LL H A+ +A + E L +A ++ + + LL + A+
Sbjct: 151 GKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFANR 210
Query: 742 EATTEVREPMLHIACKKNRIKVVELLLKH 770
E T + +A ++ +V LL +H
Sbjct: 211 EITDHMDRLPRDVASERLHHDIVRLLDEH 239
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 2/209 (0%)
Query: 597 KVVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHI 655
+V+ LL GA + AT + E LH+A + R + LL GA + LH
Sbjct: 31 QVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHA 90
Query: 656 ACKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEV 714
A + + V ++LL++ A+ + A L +A + +VE L+ A I A
Sbjct: 91 AVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNS 150
Query: 715 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 774
+ LH A N + V +LL H A+ +A + E L +A ++ + + LL + A+
Sbjct: 151 GKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFANR 210
Query: 775 EATTEVREPMLHIACKKNRIKVVELLLKH 803
E T + +A ++ +V LL +H
Sbjct: 211 EITDHMDRLPRDVASERLHHDIVRLLDEH 239
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 2/209 (0%)
Query: 630 KVVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHI 688
+V+ LL GA + AT + E LH+A + R + LL GA + LH
Sbjct: 31 QVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHA 90
Query: 689 ACKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEV 747
A + + V ++LL++ A+ + A L +A + +VE L+ A I A
Sbjct: 91 AVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNS 150
Query: 748 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 807
+ LH A N + V +LL H A+ +A + E L +A ++ + + LL + A+
Sbjct: 151 GKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFANR 210
Query: 808 EATTEVREPMLHIACKKNRIKVVELLLKH 836
E T + +A ++ +V LL +H
Sbjct: 211 EITDHMDRLPRDVASERLHHDIVRLLDEH 239
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 2/209 (0%)
Query: 663 KVVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHI 721
+V+ LL GA + AT + E LH+A + R + LL GA + LH
Sbjct: 31 QVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHA 90
Query: 722 ACKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEV 780
A + + V ++LL++ A+ + A L +A + +VE L+ A I A
Sbjct: 91 AVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNS 150
Query: 781 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 840
+ LH A N + V +LL H A+ +A + E L +A ++ + + LL + A+
Sbjct: 151 GKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFANR 210
Query: 841 EATTEVREPMLHIACKKNRIKVVELLLKH 869
E T + +A ++ +V LL +H
Sbjct: 211 EITDHMDRLPRDVASERLHHDIVRLLDEH 239
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 2/209 (0%)
Query: 696 KVVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHI 754
+V+ LL GA + AT + E LH+A + R + LL GA + LH
Sbjct: 31 QVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHA 90
Query: 755 ACKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEV 813
A + + V ++LL++ A+ + A L +A + +VE L+ A I A
Sbjct: 91 AVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNS 150
Query: 814 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 873
+ LH A N + V +LL H A+ +A + E L +A ++ + + LL + A+
Sbjct: 151 GKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFANR 210
Query: 874 EATTEVREPMLHIACKKNRIKVVELLLKH 902
E T + +A ++ +V LL +H
Sbjct: 211 EITDHMDRLPRDVASERLHHDIVRLLDEH 239
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 2/209 (0%)
Query: 729 KVVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHI 787
+V+ LL GA + AT + E LH+A + R + LL GA + LH
Sbjct: 31 QVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHA 90
Query: 788 ACKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEV 846
A + + V ++LL++ A+ + A L +A + +VE L+ A I A
Sbjct: 91 AVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNS 150
Query: 847 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 906
+ LH A N + V +LL H A+ +A + E L +A ++ + + LL + A+
Sbjct: 151 GKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFANR 210
Query: 907 EATTEVREPMLHIACKKNRIKVVELLLKH 935
E T + +A ++ +V LL +H
Sbjct: 211 EITDHMDRLPRDVASERLHHDIVRLLDEH 239
Score = 47.0 bits (110), Expect = 7e-05, Method: Composition-based stats.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 2/210 (0%)
Query: 200 ARVAKTLLDKKADPNARA-LNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVREPMLH 258
A+V LL + A+ NA G T LH+A + R + LL GA + LH
Sbjct: 30 AQVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLH 89
Query: 259 IACKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTE 317
A + + V ++LL++ A+ + A L +A + +VE L+ A I A
Sbjct: 90 AAVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADN 149
Query: 318 VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGAS 377
+ LH A N + V +LL H A+ +A + E L +A ++ + + LL + A+
Sbjct: 150 SGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFAN 209
Query: 378 IEATTEVREPMLHIACKKNRIKVVELLLKH 407
E T + +A ++ +V LL +H
Sbjct: 210 REITDHMDRLPRDVASERLHHDIVRLLDEH 239
Score = 44.7 bits (104), Expect = 4e-04, Method: Composition-based stats.
Identities = 48/182 (26%), Positives = 82/182 (45%), Gaps = 2/182 (1%)
Query: 762 KVVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHI 820
+V+ LL GA + AT + E LH+A + R + LL GA + LH
Sbjct: 31 QVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHA 90
Query: 821 ACKKNRIKVVELLLKHGAS-IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEV 879
A + + V ++LL++ A+ + A L +A + +VE L+ A I A
Sbjct: 91 AVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNS 150
Query: 880 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASS 939
+ LH A N + V +LL H A+ +A + E L +A ++ + + LL + A+
Sbjct: 151 GKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFANR 210
Query: 940 HV 941
+
Sbjct: 211 EI 212
Score = 44.3 bits (103), Expect = 4e-04, Method: Composition-based stats.
Identities = 38/131 (29%), Positives = 59/131 (45%), Gaps = 1/131 (0%)
Query: 1258 GFTPLHHSAQQGHSTIVALLLDRGASPNAT-NKGFTPLHHSAQQGHSTIVALLLDRGASP 1316
G T LH +A+ + LLD GA N+ N G TPLH + + +LL A+
Sbjct: 51 GETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAAVAADAMGVFQILLRNRATN 110
Query: 1317 NATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALL 1376
G TPL +A M L+ A+++ + G T LH +A ++ V +L
Sbjct: 111 LNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNSGKTALHWAAAVNNTEAVNIL 170
Query: 1377 LDRGASPNATN 1387
L A+ +A +
Sbjct: 171 LMHHANRDAQD 181
Score = 41.2 bits (95), Expect = 0.004, Method: Composition-based stats.
Identities = 69/263 (26%), Positives = 110/263 (41%), Gaps = 47/263 (17%)
Query: 34 ITPLHVAAKWG---------------KANMVTLLLSRGANIDNKTRD--GLTALHCAARS 76
+TPL +AA G A +++ LL++GA + N T D G T+LH AAR
Sbjct: 3 LTPLMIAAVRGGGLDTGEDIENNEDSTAQVISDLLAQGAEL-NATMDKTGETSLHLAARF 61
Query: 77 GHEAVIEMLLEQGAPISSKTKVRGFYILRSGHEAVIEMLLEQGAPISSKTKVAAVLLENG 136
+ LL+ GA +S+ +G + A + V +LL N
Sbjct: 62 ARADAAKRLLDAGADANSQDN--------TGRTPL------HAAVAADAMGVFQILLRNR 107
Query: 137 AS-LTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPV---DFQGKAPVDDVTVDYLTALH 192
A+ L + G TPL L + + + L+ DA + D GK TALH
Sbjct: 108 ATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNSGK-----------TALH 156
Query: 193 VAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEV 252
AA + LL A+ +A+ TPL +A ++ + + LL + A+ E T +
Sbjct: 157 WAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFANREITDHM 216
Query: 253 REPMLHIACKKNRIKVVELLLKH 275
+A ++ +V LL +H
Sbjct: 217 DRLPRDVASERLHHDIVRLLDEH 239
Score = 39.3 bits (90), Expect = 0.017, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 57/128 (44%), Gaps = 1/128 (0%)
Query: 991 QTPLHIASRLGNVDIVMLLLQHGAA-VDSTTKDLYTALHIAAKEGQEEVAAVLLENGASL 1049
+TPLH A + + +LL++ A +++ D T L +AA+ E + L+ A +
Sbjct: 85 RTPLHAAVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADI 144
Query: 1050 TSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLL 1109
+ G T LH + + +LL A D Q TPL +A+ + LL
Sbjct: 145 NAADNSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALL 204
Query: 1110 EKGASMDI 1117
+ A+ +I
Sbjct: 205 DNFANREI 212
Score = 36.6 bits (83), Expect = 0.10, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 1303 STIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLH 1362
+ +++ LL +GA NAT G T LH+A + + A+ LLD A+ + + G TPLH
Sbjct: 30 AQVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLH 89
Query: 1363 HS-AQQGHSTIVALLLDRGASPNA 1385
+ A LL +R + NA
Sbjct: 90 AAVAADAMGVFQILLRNRATNLNA 113
Score = 31.6 bits (70), Expect = 3.0, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 31/70 (44%)
Query: 21 NTINPFGSHFQHNITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEA 80
N + TPL +AA+ MV L++ A+I+ G TALH AA +
Sbjct: 106 NRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNSGKTALHWAAAVNNTE 165
Query: 81 VIEMLLEQGA 90
+ +LL A
Sbjct: 166 AVNILLMHHA 175
>pdb|3V2O|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The
Ankyrin Repeat Domains Of Human Ankra2
Length = 183
Score = 64.7 bits (156), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 2/121 (1%)
Query: 1253 NTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATNKGF-TPLHHSAQQGHSTIVALLLD 1311
+T ++GFTPL +A G +V LL GA P KG + L + +G++ IV +LLD
Sbjct: 47 HTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLD 106
Query: 1312 RGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHST 1371
G N + G TPL A H + ++LL+ A+ + TD G+ + + G+ +
Sbjct: 107 CGVDVNEYDWNGG-TPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRS 165
Query: 1372 I 1372
+
Sbjct: 166 V 166
Score = 63.9 bits (154), Expect = 6e-10, Method: Composition-based stats.
Identities = 41/123 (33%), Positives = 61/123 (49%), Gaps = 2/123 (1%)
Query: 1262 LHHSAQQGHSTIVALLLDRGASPNATNK-GFTPLHHSAQQGHSTIVALLLDRGASPNATN 1320
+H A QG +A +++ N T++ GFTPL +A G +V LL GA P
Sbjct: 23 VHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLG 82
Query: 1321 KTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRG 1380
K R + L +AC G + ++LLD +V+ G TPL ++ H V +LL+ G
Sbjct: 83 KGRE-SALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESG 141
Query: 1381 ASP 1383
A P
Sbjct: 142 ADP 144
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 54/115 (46%), Gaps = 8/115 (6%)
Query: 130 AVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKAPVDDVTVDYLT 189
A +E + T ++GFTPL +G I V + LLQ A GK +
Sbjct: 36 ATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRE--------S 87
Query: 190 ALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGA 244
AL +A G+ + K LLD D N NG TPL A N +K V++LL+ GA
Sbjct: 88 ALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGA 142
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 62/122 (50%), Gaps = 2/122 (1%)
Query: 190 ALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEAT 249
++H A G T ++++ N GFTPL A +I VVE LL++GA +
Sbjct: 22 SVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLL 81
Query: 250 TEVREPMLHIACKKNRIKVVELLLKHGASI-EATTEVREPMLHIACKKNRIKVVELLLKH 308
+ RE L +AC K +V++LL G + E P+L+ A N +K V++LL+
Sbjct: 82 GKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLY-AVHGNHVKCVKMLLES 140
Query: 309 GA 310
GA
Sbjct: 141 GA 142
Score = 55.1 bits (131), Expect = 3e-07, Method: Composition-based stats.
Identities = 49/195 (25%), Positives = 78/195 (40%), Gaps = 46/195 (23%)
Query: 1026 ALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQ 1085
++H A +G+ A +E + T ++GFTPL +G I V + LLQ
Sbjct: 22 SVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQ-------- 73
Query: 1086 GKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASE 1145
NG P LL KG + L L+ S+
Sbjct: 74 --NGADPQ--------------LLGKGRE----------------------SALSLACSK 95
Query: 1146 GHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPL 1205
G+ D+ MLL+ G DV+ NG TPL + V ++LL++ A T G+ +
Sbjct: 96 GYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSM 155
Query: 1206 HIACHYGQISMARLL 1220
+A G S+ +++
Sbjct: 156 DLAVALGYRSVQQVI 170
Score = 53.9 bits (128), Expect = 7e-07, Method: Composition-based stats.
Identities = 40/142 (28%), Positives = 63/142 (44%), Gaps = 13/142 (9%)
Query: 1016 VDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLL 1075
++ T ++ +T L AA GQ V LL+NGA K + L L G+ + K+L
Sbjct: 45 INHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKML 104
Query: 1076 LQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAG 1135
L V+ NG TPL A H +H +LLE GA P E+ +G
Sbjct: 105 LDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGAD-------------PTIETDSG 151
Query: 1136 FTPLHLSASEGHADMSAMLLEH 1157
+ + L+ + G+ + ++ H
Sbjct: 152 YNSMDLAVALGYRSVQQVIESH 173
Score = 53.1 bits (126), Expect = 1e-06, Method: Composition-based stats.
Identities = 42/169 (24%), Positives = 69/169 (40%), Gaps = 27/169 (15%)
Query: 1139 LHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPT 1198
+H A++G A +E ++H + G TPL A ++ V E LL+N A
Sbjct: 23 VHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLG 82
Query: 1199 KKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRXXXXXXXXXXXXXXYTNTTD-Q 1257
K + L +AC G + ++LLD +V N D
Sbjct: 83 KGRESALSLACSKGYTDIVKMLLDCGVDV-------------------------NEYDWN 117
Query: 1258 GFTPLHHSAQQGHSTIVALLLDRGASPN-ATNKGFTPLHHSAQQGHSTI 1305
G TPL ++ H V +LL+ GA P T+ G+ + + G+ ++
Sbjct: 118 GGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSV 166
Score = 49.7 bits (117), Expect = 1e-05, Method: Composition-based stats.
Identities = 41/147 (27%), Positives = 67/147 (45%), Gaps = 3/147 (2%)
Query: 961 SSSILRLATCDVLPQCETRL---NFSNLRVREQQTPLHIASRLGNVDIVMLLLQHGAAVD 1017
S S+ +LA + TR+ N N E TPL A+ G + +V LLQ+GA
Sbjct: 20 SLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQ 79
Query: 1018 STTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQ 1077
K +AL +A +G ++ +LL+ G + G TPL H+K K+LL+
Sbjct: 80 LLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLE 139
Query: 1078 KDAPVDFQGKNGVTPLHVASHYDHQNV 1104
A + +G + +A +++V
Sbjct: 140 SGADPTIETDSGYNSMDLAVALGYRSV 166
Score = 47.0 bits (110), Expect = 8e-05, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 45/95 (47%)
Query: 1135 GFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQV 1194
GFTPL +A+ G + LL++GAD K + L L + + ++LL V
Sbjct: 52 GFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDV 111
Query: 1195 DTPTKKGFTPLHIACHYGQISMARLLLDQSANVTV 1229
+ G TPL A H + ++LL+ A+ T+
Sbjct: 112 NEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTI 146
Score = 45.8 bits (107), Expect = 2e-04, Method: Composition-based stats.
Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 11/132 (8%)
Query: 821 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI-EATTEV 879
A +I VVE LL++GA + + RE L +AC K +V++LL G + E
Sbjct: 59 AAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNG 118
Query: 880 REPMLHIACKKNRIKVVELLLKHGA--SIEATTEVREPMLHIACKKNRIKVVELLLKHGA 937
P+L+ A N +K V++LL+ GA +IE + L +A ++ V
Sbjct: 119 GTPLLY-AVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQV-------I 170
Query: 938 SSHVVSCYSNVK 949
SH++ N+K
Sbjct: 171 ESHLLKLLQNIK 182
Score = 45.1 bits (105), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 293 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI-EATTEV 351
A +I VVE LL++GA + + RE L +AC K +V++LL G + E
Sbjct: 59 AAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNG 118
Query: 352 REPMLHIACKKNRIKVVELLLKHGA 376
P+L+ A N +K V++LL+ GA
Sbjct: 119 GTPLLY-AVHGNHVKCVKMLLESGA 142
Score = 45.1 bits (105), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 359 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI-EATTEV 417
A +I VVE LL++GA + + RE L +AC K +V++LL G + E
Sbjct: 59 AAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNG 118
Query: 418 REPMLHIACKKNRIKVVELLLKHGA 442
P+L+ A N +K V++LL+ GA
Sbjct: 119 GTPLLY-AVHGNHVKCVKMLLESGA 142
Score = 45.1 bits (105), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 425 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI-EATTEV 483
A +I VVE LL++GA + + RE L +AC K +V++LL G + E
Sbjct: 59 AAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNG 118
Query: 484 REPMLHIACKKNRIKVVELLLKHGA 508
P+L+ A N +K V++LL+ GA
Sbjct: 119 GTPLLY-AVHGNHVKCVKMLLESGA 142
Score = 45.1 bits (105), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 491 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI-EATTEV 549
A +I VVE LL++GA + + RE L +AC K +V++LL G + E
Sbjct: 59 AAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNG 118
Query: 550 REPMLHIACKKNRIKVVELLLKHGA 574
P+L+ A N +K V++LL+ GA
Sbjct: 119 GTPLLY-AVHGNHVKCVKMLLESGA 142
Score = 45.1 bits (105), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 557 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI-EATTEV 615
A +I VVE LL++GA + + RE L +AC K +V++LL G + E
Sbjct: 59 AAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNG 118
Query: 616 REPMLHIACKKNRIKVVELLLKHGA 640
P+L+ A N +K V++LL+ GA
Sbjct: 119 GTPLLY-AVHGNHVKCVKMLLESGA 142
Score = 45.1 bits (105), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 623 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI-EATTEV 681
A +I VVE LL++GA + + RE L +AC K +V++LL G + E
Sbjct: 59 AAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNG 118
Query: 682 REPMLHIACKKNRIKVVELLLKHGA 706
P+L+ A N +K V++LL+ GA
Sbjct: 119 GTPLLY-AVHGNHVKCVKMLLESGA 142
Score = 45.1 bits (105), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 689 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI-EATTEV 747
A +I VVE LL++GA + + RE L +AC K +V++LL G + E
Sbjct: 59 AAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNG 118
Query: 748 REPMLHIACKKNRIKVVELLLKHGA 772
P+L+ A N +K V++LL+ GA
Sbjct: 119 GTPLLY-AVHGNHVKCVKMLLESGA 142
Score = 45.1 bits (105), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 755 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI-EATTEV 813
A +I VVE LL++GA + + RE L +AC K +V++LL G + E
Sbjct: 59 AAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNG 118
Query: 814 REPMLHIACKKNRIKVVELLLKHGA 838
P+L+ A N +K V++LL+ GA
Sbjct: 119 GTPLLY-AVHGNHVKCVKMLLESGA 142
Score = 42.4 bits (98), Expect = 0.002, Method: Composition-based stats.
Identities = 38/143 (26%), Positives = 61/143 (42%), Gaps = 15/143 (10%)
Query: 29 HFQ-HNITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLE 87
+FQ N +H A G+ + + + I++ +G T L AA G AV+E LL+
Sbjct: 14 YFQGANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQ 73
Query: 88 QGAPISSKTKVRGFYILRSGHEAVIEMLLEQGAPISSKTKVAAVLLENGASLTSTTKKGF 147
GA +L G E+ + + +G T + +LL+ G + G
Sbjct: 74 NGADPQ---------LLGKGRESALSLACSKGY-----TDIVKMLLDCGVDVNEYDWNGG 119
Query: 148 TPLHLTGKYGHIKVAKLLLQKDA 170
TPL H+K K+LL+ A
Sbjct: 120 TPLLYAVHGNHVKCVKMLLESGA 142
Score = 42.4 bits (98), Expect = 0.002, Method: Composition-based stats.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Query: 1294 LHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCT 1353
+H A QG +A +++ N T++ GFTPL A +GQI++ LL A+
Sbjct: 23 VHQLAAQGEMLYLATRIEQENVINHTDE-EGFTPLMWAAAHGQIAVVEFLLQNGADPQLL 81
Query: 1354 TDQGFTPLHHSAQQGHSTIVALLLDRGASPN 1384
+ L + +G++ IV +LLD G N
Sbjct: 82 GKGRESALSLACSKGYTDIVKMLLDCGVDVN 112
Score = 40.8 bits (94), Expect = 0.005, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 3/99 (3%)
Query: 31 QHNITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGA 90
+ TPL AA G+ +V LL GA+ + +AL A G+ +++MLL+ G
Sbjct: 50 EEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGV 109
Query: 91 PISSKTKVRG---FYILRSGHEAVIEMLLEQGAPISSKT 126
++ G Y + H ++MLLE GA + +T
Sbjct: 110 DVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIET 148
Score = 34.7 bits (78), Expect = 0.37, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 1344 LDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATNK 1388
++Q ++ T ++GFTPL +A G +V LL GA P K
Sbjct: 39 IEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGK 83
Score = 33.9 bits (76), Expect = 0.65, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 40/86 (46%)
Query: 990 QQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASL 1049
+++ L +A G DIV +LL G V+ + T L A + +LLE+GA
Sbjct: 85 RESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADP 144
Query: 1050 TSTTKKGFTPLHLTGKYGHIKVAKLL 1075
T T G+ + L G+ V +++
Sbjct: 145 TIETDSGYNSMDLAVALGYRSVQQVI 170
>pdb|3SO8|A Chain A, Crystal Structure Of Ankra
Length = 162
Score = 64.7 bits (156), Expect = 4e-10, Method: Composition-based stats.
Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 2/121 (1%)
Query: 1253 NTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATNKGF-TPLHHSAQQGHSTIVALLLD 1311
+T ++GFTPL +A G +V LL GA P KG + L + +G++ IV +LLD
Sbjct: 29 HTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLD 88
Query: 1312 RGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHST 1371
G N + G TPL A H + ++LL+ A+ + TD G+ + + G+ +
Sbjct: 89 CGVDVNEYDWNGG-TPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRS 147
Query: 1372 I 1372
+
Sbjct: 148 V 148
Score = 63.5 bits (153), Expect = 7e-10, Method: Composition-based stats.
Identities = 41/123 (33%), Positives = 61/123 (49%), Gaps = 2/123 (1%)
Query: 1262 LHHSAQQGHSTIVALLLDRGASPNATNK-GFTPLHHSAQQGHSTIVALLLDRGASPNATN 1320
+H A QG +A +++ N T++ GFTPL +A G +V LL GA P
Sbjct: 5 VHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLG 64
Query: 1321 KTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRG 1380
K R + L +AC G + ++LLD +V+ G TPL ++ H V +LL+ G
Sbjct: 65 KGRE-SALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESG 123
Query: 1381 ASP 1383
A P
Sbjct: 124 ADP 126
Score = 59.3 bits (142), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 54/115 (46%), Gaps = 8/115 (6%)
Query: 130 AVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKAPVDDVTVDYLT 189
A +E + T ++GFTPL +G I V + LLQ A GK +
Sbjct: 18 ATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRE--------S 69
Query: 190 ALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGA 244
AL +A G+ + K LLD D N NG TPL A N +K V++LL+ GA
Sbjct: 70 ALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGA 124
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 62/122 (50%), Gaps = 2/122 (1%)
Query: 190 ALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEAT 249
++H A G T ++++ N GFTPL A +I VVE LL++GA +
Sbjct: 4 SVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLL 63
Query: 250 TEVREPMLHIACKKNRIKVVELLLKHGASI-EATTEVREPMLHIACKKNRIKVVELLLKH 308
+ RE L +AC K +V++LL G + E P+L+ A N +K V++LL+
Sbjct: 64 GKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLY-AVHGNHVKCVKMLLES 122
Query: 309 GA 310
GA
Sbjct: 123 GA 124
Score = 54.7 bits (130), Expect = 4e-07, Method: Composition-based stats.
Identities = 49/195 (25%), Positives = 78/195 (40%), Gaps = 46/195 (23%)
Query: 1026 ALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQ 1085
++H A +G+ A +E + T ++GFTPL +G I V + LLQ
Sbjct: 4 SVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQ-------- 55
Query: 1086 GKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASE 1145
NG P LL KG + L L+ S+
Sbjct: 56 --NGADPQ--------------LLGKGRE----------------------SALSLACSK 77
Query: 1146 GHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPL 1205
G+ D+ MLL+ G DV+ NG TPL + V ++LL++ A T G+ +
Sbjct: 78 GYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSM 137
Query: 1206 HIACHYGQISMARLL 1220
+A G S+ +++
Sbjct: 138 DLAVALGYRSVQQVI 152
Score = 53.5 bits (127), Expect = 7e-07, Method: Composition-based stats.
Identities = 40/142 (28%), Positives = 63/142 (44%), Gaps = 13/142 (9%)
Query: 1016 VDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLL 1075
++ T ++ +T L AA GQ V LL+NGA K + L L G+ + K+L
Sbjct: 27 INHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKML 86
Query: 1076 LQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAG 1135
L V+ NG TPL A H +H +LLE GA P E+ +G
Sbjct: 87 LDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGAD-------------PTIETDSG 133
Query: 1136 FTPLHLSASEGHADMSAMLLEH 1157
+ + L+ + G+ + ++ H
Sbjct: 134 YNSMDLAVALGYRSVQQVIESH 155
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 42/169 (24%), Positives = 69/169 (40%), Gaps = 27/169 (15%)
Query: 1139 LHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPT 1198
+H A++G A +E ++H + G TPL A ++ V E LL+N A
Sbjct: 5 VHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLG 64
Query: 1199 KKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRXXXXXXXXXXXXXXYTNTTD-Q 1257
K + L +AC G + ++LLD +V N D
Sbjct: 65 KGRESALSLACSKGYTDIVKMLLDCGVDV-------------------------NEYDWN 99
Query: 1258 GFTPLHHSAQQGHSTIVALLLDRGASPN-ATNKGFTPLHHSAQQGHSTI 1305
G TPL ++ H V +LL+ GA P T+ G+ + + G+ ++
Sbjct: 100 GGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSV 148
Score = 49.7 bits (117), Expect = 1e-05, Method: Composition-based stats.
Identities = 41/147 (27%), Positives = 67/147 (45%), Gaps = 3/147 (2%)
Query: 961 SSSILRLATCDVLPQCETRL---NFSNLRVREQQTPLHIASRLGNVDIVMLLLQHGAAVD 1017
S S+ +LA + TR+ N N E TPL A+ G + +V LLQ+GA
Sbjct: 2 SLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQ 61
Query: 1018 STTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQ 1077
K +AL +A +G ++ +LL+ G + G TPL H+K K+LL+
Sbjct: 62 LLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLE 121
Query: 1078 KDAPVDFQGKNGVTPLHVASHYDHQNV 1104
A + +G + +A +++V
Sbjct: 122 SGADPTIETDSGYNSMDLAVALGYRSV 148
Score = 46.6 bits (109), Expect = 9e-05, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 45/95 (47%)
Query: 1135 GFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQV 1194
GFTPL +A+ G + LL++GAD K + L L + + ++LL V
Sbjct: 34 GFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDV 93
Query: 1195 DTPTKKGFTPLHIACHYGQISMARLLLDQSANVTV 1229
+ G TPL A H + ++LL+ A+ T+
Sbjct: 94 NEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTI 128
Score = 45.1 bits (105), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 293 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI-EATTEV 351
A +I VVE LL++GA + + RE L +AC K +V++LL G + E
Sbjct: 41 AAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNG 100
Query: 352 REPMLHIACKKNRIKVVELLLKHGA 376
P+L+ A N +K V++LL+ GA
Sbjct: 101 GTPLLY-AVHGNHVKCVKMLLESGA 124
Score = 45.1 bits (105), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 359 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI-EATTEV 417
A +I VVE LL++GA + + RE L +AC K +V++LL G + E
Sbjct: 41 AAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNG 100
Query: 418 REPMLHIACKKNRIKVVELLLKHGA 442
P+L+ A N +K V++LL+ GA
Sbjct: 101 GTPLLY-AVHGNHVKCVKMLLESGA 124
Score = 45.1 bits (105), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 425 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI-EATTEV 483
A +I VVE LL++GA + + RE L +AC K +V++LL G + E
Sbjct: 41 AAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNG 100
Query: 484 REPMLHIACKKNRIKVVELLLKHGA 508
P+L+ A N +K V++LL+ GA
Sbjct: 101 GTPLLY-AVHGNHVKCVKMLLESGA 124
Score = 45.1 bits (105), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 491 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI-EATTEV 549
A +I VVE LL++GA + + RE L +AC K +V++LL G + E
Sbjct: 41 AAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNG 100
Query: 550 REPMLHIACKKNRIKVVELLLKHGA 574
P+L+ A N +K V++LL+ GA
Sbjct: 101 GTPLLY-AVHGNHVKCVKMLLESGA 124
Score = 45.1 bits (105), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 557 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI-EATTEV 615
A +I VVE LL++GA + + RE L +AC K +V++LL G + E
Sbjct: 41 AAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNG 100
Query: 616 REPMLHIACKKNRIKVVELLLKHGA 640
P+L+ A N +K V++LL+ GA
Sbjct: 101 GTPLLY-AVHGNHVKCVKMLLESGA 124
Score = 45.1 bits (105), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 623 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI-EATTEV 681
A +I VVE LL++GA + + RE L +AC K +V++LL G + E
Sbjct: 41 AAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNG 100
Query: 682 REPMLHIACKKNRIKVVELLLKHGA 706
P+L+ A N +K V++LL+ GA
Sbjct: 101 GTPLLY-AVHGNHVKCVKMLLESGA 124
Score = 45.1 bits (105), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 689 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI-EATTEV 747
A +I VVE LL++GA + + RE L +AC K +V++LL G + E
Sbjct: 41 AAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNG 100
Query: 748 REPMLHIACKKNRIKVVELLLKHGA 772
P+L+ A N +K V++LL+ GA
Sbjct: 101 GTPLLY-AVHGNHVKCVKMLLESGA 124
Score = 45.1 bits (105), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 755 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI-EATTEV 813
A +I VVE LL++GA + + RE L +AC K +V++LL G + E
Sbjct: 41 AAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNG 100
Query: 814 REPMLHIACKKNRIKVVELLLKHGA 838
P+L+ A N +K V++LL+ GA
Sbjct: 101 GTPLLY-AVHGNHVKCVKMLLESGA 124
Score = 45.1 bits (105), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 821 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI-EATTEV 879
A +I VVE LL++GA + + RE L +AC K +V++LL G + E
Sbjct: 41 AAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNG 100
Query: 880 REPMLHIACKKNRIKVVELLLKHGA 904
P+L+ A N +K V++LL+ GA
Sbjct: 101 GTPLLY-AVHGNHVKCVKMLLESGA 124
Score = 42.4 bits (98), Expect = 0.002, Method: Composition-based stats.
Identities = 36/138 (26%), Positives = 58/138 (42%), Gaps = 14/138 (10%)
Query: 33 NITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPI 92
N +H A G+ + + + I++ +G T L AA G AV+E LL+ GA
Sbjct: 1 NSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADP 60
Query: 93 SSKTKVRGFYILRSGHEAVIEMLLEQGAPISSKTKVAAVLLENGASLTSTTKKGFTPLHL 152
+L G E+ + + +G T + +LL+ G + G TPL
Sbjct: 61 Q---------LLGKGRESALSLACSKGY-----TDIVKMLLDCGVDVNEYDWNGGTPLLY 106
Query: 153 TGKYGHIKVAKLLLQKDA 170
H+K K+LL+ A
Sbjct: 107 AVHGNHVKCVKMLLESGA 124
Score = 42.4 bits (98), Expect = 0.002, Method: Composition-based stats.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Query: 1294 LHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCT 1353
+H A QG +A +++ N T++ GFTPL A +GQI++ LL A+
Sbjct: 5 VHQLAAQGEMLYLATRIEQENVINHTDE-EGFTPLMWAAAHGQIAVVEFLLQNGADPQLL 63
Query: 1354 TDQGFTPLHHSAQQGHSTIVALLLDRGASPN 1384
+ L + +G++ IV +LLD G N
Sbjct: 64 GKGRESALSLACSKGYTDIVKMLLDCGVDVN 94
Score = 40.8 bits (94), Expect = 0.005, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 3/99 (3%)
Query: 31 QHNITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGA 90
+ TPL AA G+ +V LL GA+ + +AL A G+ +++MLL+ G
Sbjct: 32 EEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGV 91
Query: 91 PISSKTKVRG---FYILRSGHEAVIEMLLEQGAPISSKT 126
++ G Y + H ++MLLE GA + +T
Sbjct: 92 DVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIET 130
Score = 35.4 bits (80), Expect = 0.24, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 887 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG 936
A +I VVE LL++GA + + RE L +AC K +V++LL G
Sbjct: 41 AAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCG 90
Score = 34.7 bits (78), Expect = 0.40, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 1344 LDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATNK 1388
++Q ++ T ++GFTPL +A G +V LL GA P K
Sbjct: 21 IEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGK 65
Score = 33.9 bits (76), Expect = 0.66, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 40/86 (46%)
Query: 990 QQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASL 1049
+++ L +A G DIV +LL G V+ + T L A + +LLE+GA
Sbjct: 67 RESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADP 126
Query: 1050 TSTTKKGFTPLHLTGKYGHIKVAKLL 1075
T T G+ + L G+ V +++
Sbjct: 127 TIETDSGYNSMDLAVALGYRSVQQVI 152
>pdb|3V2X|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The
Ankyrin Repeat Domains Of Human Ankra2
pdb|3V31|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The
Ankyrin Repeat Domains Of Human Ankra2
Length = 167
Score = 64.3 bits (155), Expect = 4e-10, Method: Composition-based stats.
Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 2/121 (1%)
Query: 1253 NTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATNKGF-TPLHHSAQQGHSTIVALLLD 1311
+T ++GFTPL +A G +V LL GA P KG + L + +G++ IV +LLD
Sbjct: 31 HTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLD 90
Query: 1312 RGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHST 1371
G N + G TPL A H + ++LL+ A+ + TD G+ + + G+ +
Sbjct: 91 CGVDVNEYDWNGG-TPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRS 149
Query: 1372 I 1372
+
Sbjct: 150 V 150
Score = 63.5 bits (153), Expect = 8e-10, Method: Composition-based stats.
Identities = 41/123 (33%), Positives = 61/123 (49%), Gaps = 2/123 (1%)
Query: 1262 LHHSAQQGHSTIVALLLDRGASPNATNK-GFTPLHHSAQQGHSTIVALLLDRGASPNATN 1320
+H A QG +A +++ N T++ GFTPL +A G +V LL GA P
Sbjct: 7 VHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLG 66
Query: 1321 KTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRG 1380
K R + L +AC G + ++LLD +V+ G TPL ++ H V +LL+ G
Sbjct: 67 KGRE-SALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESG 125
Query: 1381 ASP 1383
A P
Sbjct: 126 ADP 128
Score = 58.9 bits (141), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 54/115 (46%), Gaps = 8/115 (6%)
Query: 130 AVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKAPVDDVTVDYLT 189
A +E + T ++GFTPL +G I V + LLQ A GK +
Sbjct: 20 ATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKG--------RES 71
Query: 190 ALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGA 244
AL +A G+ + K LLD D N NG TPL A N +K V++LL+ GA
Sbjct: 72 ALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGA 126
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 62/122 (50%), Gaps = 2/122 (1%)
Query: 190 ALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEAT 249
++H A G T ++++ N GFTPL A +I VVE LL++GA +
Sbjct: 6 SVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLL 65
Query: 250 TEVREPMLHIACKKNRIKVVELLLKHGASI-EATTEVREPMLHIACKKNRIKVVELLLKH 308
+ RE L +AC K +V++LL G + E P+L+ A N +K V++LL+
Sbjct: 66 GKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLY-AVHGNHVKCVKMLLES 124
Query: 309 GA 310
GA
Sbjct: 125 GA 126
Score = 54.7 bits (130), Expect = 4e-07, Method: Composition-based stats.
Identities = 49/195 (25%), Positives = 78/195 (40%), Gaps = 46/195 (23%)
Query: 1026 ALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQ 1085
++H A +G+ A +E + T ++GFTPL +G I V + LLQ
Sbjct: 6 SVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQ-------- 57
Query: 1086 GKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASE 1145
NG P LL KG + L L+ S+
Sbjct: 58 --NGADPQ--------------LLGKGRE----------------------SALSLACSK 79
Query: 1146 GHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPL 1205
G+ D+ MLL+ G DV+ NG TPL + V ++LL++ A T G+ +
Sbjct: 80 GYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSM 139
Query: 1206 HIACHYGQISMARLL 1220
+A G S+ +++
Sbjct: 140 DLAVALGYRSVQQVI 154
Score = 53.5 bits (127), Expect = 8e-07, Method: Composition-based stats.
Identities = 40/142 (28%), Positives = 63/142 (44%), Gaps = 13/142 (9%)
Query: 1016 VDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLL 1075
++ T ++ +T L AA GQ V LL+NGA K + L L G+ + K+L
Sbjct: 29 INHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKML 88
Query: 1076 LQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAG 1135
L V+ NG TPL A H +H +LLE GA P E+ +G
Sbjct: 89 LDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGAD-------------PTIETDSG 135
Query: 1136 FTPLHLSASEGHADMSAMLLEH 1157
+ + L+ + G+ + ++ H
Sbjct: 136 YNSMDLAVALGYRSVQQVIESH 157
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 42/169 (24%), Positives = 69/169 (40%), Gaps = 27/169 (15%)
Query: 1139 LHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPT 1198
+H A++G A +E ++H + G TPL A ++ V E LL+N A
Sbjct: 7 VHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLG 66
Query: 1199 KKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRXXXXXXXXXXXXXXYTNTTD-Q 1257
K + L +AC G + ++LLD +V N D
Sbjct: 67 KGRESALSLACSKGYTDIVKMLLDCGVDV-------------------------NEYDWN 101
Query: 1258 GFTPLHHSAQQGHSTIVALLLDRGASPN-ATNKGFTPLHHSAQQGHSTI 1305
G TPL ++ H V +LL+ GA P T+ G+ + + G+ ++
Sbjct: 102 GGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSV 150
Score = 49.7 bits (117), Expect = 1e-05, Method: Composition-based stats.
Identities = 41/147 (27%), Positives = 67/147 (45%), Gaps = 3/147 (2%)
Query: 961 SSSILRLATCDVLPQCETRL---NFSNLRVREQQTPLHIASRLGNVDIVMLLLQHGAAVD 1017
S S+ +LA + TR+ N N E TPL A+ G + +V LLQ+GA
Sbjct: 4 SLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQ 63
Query: 1018 STTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQ 1077
K +AL +A +G ++ +LL+ G + G TPL H+K K+LL+
Sbjct: 64 LLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLE 123
Query: 1078 KDAPVDFQGKNGVTPLHVASHYDHQNV 1104
A + +G + +A +++V
Sbjct: 124 SGADPTIETDSGYNSMDLAVALGYRSV 150
Score = 46.6 bits (109), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 45/95 (47%)
Query: 1135 GFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQV 1194
GFTPL +A+ G + LL++GAD K + L L + + ++LL V
Sbjct: 36 GFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDV 95
Query: 1195 DTPTKKGFTPLHIACHYGQISMARLLLDQSANVTV 1229
+ G TPL A H + ++LL+ A+ T+
Sbjct: 96 NEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTI 130
Score = 45.4 bits (106), Expect = 2e-04, Method: Composition-based stats.
Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 11/132 (8%)
Query: 821 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI-EATTEV 879
A +I VVE LL++GA + + RE L +AC K +V++LL G + E
Sbjct: 43 AAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNG 102
Query: 880 REPMLHIACKKNRIKVVELLLKHGA--SIEATTEVREPMLHIACKKNRIKVVELLLKHGA 937
P+L+ A N +K V++LL+ GA +IE + L +A ++ V
Sbjct: 103 GTPLLY-AVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQV-------I 154
Query: 938 SSHVVSCYSNVK 949
SH++ N+K
Sbjct: 155 ESHLLKLLQNIK 166
Score = 45.1 bits (105), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 293 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI-EATTEV 351
A +I VVE LL++GA + + RE L +AC K +V++LL G + E
Sbjct: 43 AAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNG 102
Query: 352 REPMLHIACKKNRIKVVELLLKHGA 376
P+L+ A N +K V++LL+ GA
Sbjct: 103 GTPLLY-AVHGNHVKCVKMLLESGA 126
Score = 45.1 bits (105), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 359 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI-EATTEV 417
A +I VVE LL++GA + + RE L +AC K +V++LL G + E
Sbjct: 43 AAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNG 102
Query: 418 REPMLHIACKKNRIKVVELLLKHGA 442
P+L+ A N +K V++LL+ GA
Sbjct: 103 GTPLLY-AVHGNHVKCVKMLLESGA 126
Score = 45.1 bits (105), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 425 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI-EATTEV 483
A +I VVE LL++GA + + RE L +AC K +V++LL G + E
Sbjct: 43 AAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNG 102
Query: 484 REPMLHIACKKNRIKVVELLLKHGA 508
P+L+ A N +K V++LL+ GA
Sbjct: 103 GTPLLY-AVHGNHVKCVKMLLESGA 126
Score = 45.1 bits (105), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 491 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI-EATTEV 549
A +I VVE LL++GA + + RE L +AC K +V++LL G + E
Sbjct: 43 AAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNG 102
Query: 550 REPMLHIACKKNRIKVVELLLKHGA 574
P+L+ A N +K V++LL+ GA
Sbjct: 103 GTPLLY-AVHGNHVKCVKMLLESGA 126
Score = 45.1 bits (105), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 557 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI-EATTEV 615
A +I VVE LL++GA + + RE L +AC K +V++LL G + E
Sbjct: 43 AAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNG 102
Query: 616 REPMLHIACKKNRIKVVELLLKHGA 640
P+L+ A N +K V++LL+ GA
Sbjct: 103 GTPLLY-AVHGNHVKCVKMLLESGA 126
Score = 45.1 bits (105), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 623 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI-EATTEV 681
A +I VVE LL++GA + + RE L +AC K +V++LL G + E
Sbjct: 43 AAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNG 102
Query: 682 REPMLHIACKKNRIKVVELLLKHGA 706
P+L+ A N +K V++LL+ GA
Sbjct: 103 GTPLLY-AVHGNHVKCVKMLLESGA 126
Score = 45.1 bits (105), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 689 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI-EATTEV 747
A +I VVE LL++GA + + RE L +AC K +V++LL G + E
Sbjct: 43 AAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNG 102
Query: 748 REPMLHIACKKNRIKVVELLLKHGA 772
P+L+ A N +K V++LL+ GA
Sbjct: 103 GTPLLY-AVHGNHVKCVKMLLESGA 126
Score = 45.1 bits (105), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 755 ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI-EATTEV 813
A +I VVE LL++GA + + RE L +AC K +V++LL G + E
Sbjct: 43 AAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNG 102
Query: 814 REPMLHIACKKNRIKVVELLLKHGA 838
P+L+ A N +K V++LL+ GA
Sbjct: 103 GTPLLY-AVHGNHVKCVKMLLESGA 126
Score = 42.4 bits (98), Expect = 0.002, Method: Composition-based stats.
Identities = 36/138 (26%), Positives = 58/138 (42%), Gaps = 14/138 (10%)
Query: 33 NITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPI 92
N +H A G+ + + + I++ +G T L AA G AV+E LL+ GA
Sbjct: 3 NSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADP 62
Query: 93 SSKTKVRGFYILRSGHEAVIEMLLEQGAPISSKTKVAAVLLENGASLTSTTKKGFTPLHL 152
+L G E+ + + +G T + +LL+ G + G TPL
Sbjct: 63 Q---------LLGKGRESALSLACSKGY-----TDIVKMLLDCGVDVNEYDWNGGTPLLY 108
Query: 153 TGKYGHIKVAKLLLQKDA 170
H+K K+LL+ A
Sbjct: 109 AVHGNHVKCVKMLLESGA 126
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Query: 1294 LHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCT 1353
+H A QG +A +++ N T++ GFTPL A +GQI++ LL A+
Sbjct: 7 VHQLAAQGEMLYLATRIEQENVINHTDE-EGFTPLMWAAAHGQIAVVEFLLQNGADPQLL 65
Query: 1354 TDQGFTPLHHSAQQGHSTIVALLLDRGASPN 1384
+ L + +G++ IV +LLD G N
Sbjct: 66 GKGRESALSLACSKGYTDIVKMLLDCGVDVN 96
Score = 40.4 bits (93), Expect = 0.006, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 3/99 (3%)
Query: 31 QHNITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGA 90
+ TPL AA G+ +V LL GA+ + +AL A G+ +++MLL+ G
Sbjct: 34 EEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGV 93
Query: 91 PISSKTKVRG---FYILRSGHEAVIEMLLEQGAPISSKT 126
++ G Y + H ++MLLE GA + +T
Sbjct: 94 DVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIET 132
Score = 34.7 bits (78), Expect = 0.41, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 1344 LDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATNK 1388
++Q ++ T ++GFTPL +A G +V LL GA P K
Sbjct: 23 IEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGK 67
Score = 33.9 bits (76), Expect = 0.70, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 40/86 (46%)
Query: 990 QQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASL 1049
+++ L +A G DIV +LL G V+ + T L A + +LLE+GA
Sbjct: 69 RESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADP 128
Query: 1050 TSTTKKGFTPLHLTGKYGHIKVAKLL 1075
T T G+ + L G+ V +++
Sbjct: 129 TIETDSGYNSMDLAVALGYRSVQQVI 154
>pdb|1BD8|A Chain A, Structure Of Cdk Inhibitor P19ink4d
Length = 156
Score = 63.5 bits (153), Expect = 8e-10, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 53/108 (49%), Gaps = 1/108 (0%)
Query: 1113 ASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPL 1172
S IA LL+ GA PN + +G +P+H +A G D +L+EHGADV+ G P+
Sbjct: 46 GSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPI 105
Query: 1173 HLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLL 1220
HL QE V L + + +G TPL +A G + +L
Sbjct: 106 HLAVQEGHTAVVSFLAA-ESDLHRRDARGLTPLELALQRGAQDLVDIL 152
Score = 52.4 bits (124), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 2/116 (1%)
Query: 1262 LHHSAQQGHSTIVALLLDRG-ASPNATNKGFTPLHHSAQQGHSTIVALLLDRGASPNATN 1320
L +A +G V LL R P+A N+ G + I LL +GASPN +
Sbjct: 6 LSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASPNVQD 65
Query: 1321 KTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALL 1376
T G +P+H A G + ++L++ A+V+ G P+H + Q+GH+ +V+ L
Sbjct: 66 -TSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFL 120
Score = 44.3 bits (103), Expect = 5e-04, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 52/128 (40%), Gaps = 24/128 (18%)
Query: 1182 GVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRXXXXX 1241
+A LLK A + G +P+H A G + ++L++ A+V VP
Sbjct: 49 AIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDG--------- 99
Query: 1242 XXXXXXXXXYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATNKGFTPLHHSAQQG 1301
G P+H + Q+GH+ +V+ L +G TPL + Q+G
Sbjct: 100 ---------------TGALPIHLAVQEGHTAVVSFLAAESDLHRRDARGLTPLELALQRG 144
Query: 1302 HSTIVALL 1309
+V +L
Sbjct: 145 AQDLVDIL 152
Score = 43.9 bits (102), Expect = 7e-04, Method: Composition-based stats.
Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 15/120 (12%)
Query: 126 TKVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPV---DFQGKAPVDD 182
T +A LL+ GAS G +P+H + G + K+L++ A V D G P+
Sbjct: 48 TAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPI-- 105
Query: 183 VTVDYLTALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKH 242
H+A GH V + L ++D + R G TPL +A ++ +V++L H
Sbjct: 106 ---------HLAVQEGHTAVV-SFLAAESDLHRRDARGLTPLELALQRGAQDLVDILQGH 155
Score = 43.9 bits (102), Expect = 7e-04, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 1/109 (0%)
Query: 1000 LGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTP 1059
G+ I + LL+ GA+ + + +H AA+ G + VL+E+GA + G P
Sbjct: 45 FGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALP 104
Query: 1060 LHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLL 1108
+HL + GH V L ++ + + G+TPL +A Q++ +L
Sbjct: 105 IHLAVQEGHTAVVS-FLAAESDLHRRDARGLTPLELALQRGAQDLVDIL 152
Score = 43.5 bits (101), Expect = 8e-04, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 50/124 (40%), Gaps = 14/124 (11%)
Query: 1034 GQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPL 1093
G +A LL+ GAS G +P+H + G + K+L++ A V+ G P+
Sbjct: 46 GSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPI 105
Query: 1094 HVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAM 1153
H+A H V L A D+ + G TPL L+ G D+ +
Sbjct: 106 HLAVQEGHTAVVSFL---AAESDL-----------HRRDARGLTPLELALQRGAQDLVDI 151
Query: 1154 LLEH 1157
L H
Sbjct: 152 LQGH 155
Score = 41.2 bits (95), Expect = 0.004, Method: Composition-based stats.
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 984 NLRVREQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLL 1043
N++ +P+H A+R G +D + +L++HGA V+ +H+A +EG V + L
Sbjct: 62 NVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLA 121
Query: 1044 ENGASLTSTTKKGFTPLHLTGKYGHIKVAKLL 1075
+ L +G TPL L + G + +L
Sbjct: 122 AE-SDLHRRDARGLTPLELALQRGAQDLVDIL 152
Score = 39.7 bits (91), Expect = 0.011, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 189 TALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEA 248
TAL V G +A LL + A PN + +G +P+H A + + +++L++HGA +
Sbjct: 38 TALQVMMF-GSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNV 96
Query: 249 TTEVREPMLHIACKKNRIKVVELL 272
+H+A ++ VV L
Sbjct: 97 PDGTGALPIHLAVQEGHTAVVSFL 120
Score = 37.4 bits (85), Expect = 0.063, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 1128 PNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELL 1187
P+A + G T L + G ++ LL+ GA + +G +P+H A+ + ++L
Sbjct: 29 PDALNRFGKTALQVMMF-GSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVL 87
Query: 1188 LKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQS 1224
+++ A V+ P G P+H+A G ++ L +S
Sbjct: 88 VEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAES 124
Score = 34.3 bits (77), Expect = 0.47, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 29/51 (56%)
Query: 35 TPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEML 85
+P+H AA+ G + + +L+ GA+++ G +H A + GH AV+ L
Sbjct: 70 SPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFL 120
Score = 32.7 bits (73), Expect = 1.4, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 43 WGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISSKTKVRGFY 102
+G + LL +GA+ + + G + +H AAR+G +++L+E GA ++
Sbjct: 45 FGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALP 104
Query: 103 I---LRSGHEAVIEML 115
I ++ GH AV+ L
Sbjct: 105 IHLAVQEGHTAVVSFL 120
>pdb|1BI8|B Chain B, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The
Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|D Chain D, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The
Structures Cdk6-P19ink4d Inhibitor Complex
Length = 166
Score = 63.2 bits (152), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 53/108 (49%), Gaps = 1/108 (0%)
Query: 1113 ASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPL 1172
S IA LL+ GA PN + +G +P+H +A G D +L+EHGADV+ G P+
Sbjct: 52 GSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPI 111
Query: 1173 HLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLL 1220
HL QE V L + + +G TPL +A G + +L
Sbjct: 112 HLAVQEGHTAVVSFLAA-ESDLHRRDARGLTPLELALQRGAQDLVDIL 158
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 2/116 (1%)
Query: 1262 LHHSAQQGHSTIVALLLDRG-ASPNATNKGFTPLHHSAQQGHSTIVALLLDRGASPNATN 1320
L +A +G V LL R P+A N+ G + I LL +GASPN +
Sbjct: 12 LSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASPNVQD 71
Query: 1321 KTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALL 1376
T G +P+H A G + ++L++ A+V+ G P+H + Q+GH+ +V+ L
Sbjct: 72 -TSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFL 126
Score = 52.0 bits (123), Expect = 3e-06, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 62/115 (53%), Gaps = 4/115 (3%)
Query: 1271 STIVAL-LLDRGASPNATN-KGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPL 1328
ST +AL LL +GASPN + G +P+H +A+ G + +L++ GA N + T G P+
Sbjct: 53 STAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGT-GALPI 111
Query: 1329 HIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGASP 1383
H+A G ++ L +S ++ +G TPL + Q+G +V +L +P
Sbjct: 112 HLAVQEGHTAVVSFLAAES-DLHRRDARGLTPLELALQRGAQDLVDILQGHMVAP 165
Score = 44.7 bits (104), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/135 (23%), Positives = 54/135 (40%), Gaps = 24/135 (17%)
Query: 1182 GVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRXXXXX 1241
+A LLK A + G +P+H A G + ++L++ A+V VP
Sbjct: 55 AIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDG--------- 105
Query: 1242 XXXXXXXXXYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATNKGFTPLHHSAQQG 1301
G P+H + Q+GH+ +V+ L +G TPL + Q+G
Sbjct: 106 ---------------TGALPIHLAVQEGHTAVVSFLAAESDLHRRDARGLTPLELALQRG 150
Query: 1302 HSTIVALLLDRGASP 1316
+V +L +P
Sbjct: 151 AQDLVDILQGHMVAP 165
Score = 43.5 bits (101), Expect = 8e-04, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 1/109 (0%)
Query: 1000 LGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTP 1059
G+ I + LL+ GA+ + + +H AA+ G + VL+E+GA + G P
Sbjct: 51 FGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALP 110
Query: 1060 LHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLL 1108
+HL + GH V L ++ + + G+TPL +A Q++ +L
Sbjct: 111 IHLAVQEGHTAVVS-FLAAESDLHRRDARGLTPLELALQRGAQDLVDIL 158
Score = 43.5 bits (101), Expect = 9e-04, Method: Composition-based stats.
Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 15/120 (12%)
Query: 126 TKVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPV---DFQGKAPVDD 182
T +A LL+ GAS G +P+H + G + K+L++ A V D G P+
Sbjct: 54 TAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPI-- 111
Query: 183 VTVDYLTALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKH 242
H+A GH V + L ++D + R G TPL +A ++ +V++L H
Sbjct: 112 ---------HLAVQEGHTAVV-SFLAAESDLHRRDARGLTPLELALQRGAQDLVDILQGH 161
Score = 43.1 bits (100), Expect = 0.001, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 50/124 (40%), Gaps = 14/124 (11%)
Query: 1034 GQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPL 1093
G +A LL+ GAS G +P+H + G + K+L++ A V+ G P+
Sbjct: 52 GSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPI 111
Query: 1094 HVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAM 1153
H+A H V L A D+ + G TPL L+ G D+ +
Sbjct: 112 HLAVQEGHTAVVSFL---AAESDL-----------HRRDARGLTPLELALQRGAQDLVDI 157
Query: 1154 LLEH 1157
L H
Sbjct: 158 LQGH 161
Score = 40.8 bits (94), Expect = 0.005, Method: Composition-based stats.
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 984 NLRVREQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLL 1043
N++ +P+H A+R G +D + +L++HGA V+ +H+A +EG V + L
Sbjct: 68 NVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLA 127
Query: 1044 ENGASLTSTTKKGFTPLHLTGKYGHIKVAKLL 1075
+ L +G TPL L + G + +L
Sbjct: 128 AE-SDLHRRDARGLTPLELALQRGAQDLVDIL 158
Score = 39.7 bits (91), Expect = 0.012, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 189 TALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEA 248
TAL V G +A LL + A PN + +G +P+H A + + +++L++HGA +
Sbjct: 44 TALQVMMF-GSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNV 102
Query: 249 TTEVREPMLHIACKKNRIKVVELL 272
+H+A ++ VV L
Sbjct: 103 PDGTGALPIHLAVQEGHTAVVSFL 126
Score = 37.0 bits (84), Expect = 0.070, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 1128 PNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELL 1187
P+A + G T L + G ++ LL+ GA + +G +P+H A+ + ++L
Sbjct: 35 PDALNRFGKTALQVMMF-GSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVL 93
Query: 1188 LKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQS 1224
+++ A V+ P G P+H+A G ++ L +S
Sbjct: 94 VEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAES 130
Score = 34.3 bits (77), Expect = 0.54, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 29/51 (56%)
Query: 35 TPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEML 85
+P+H AA+ G + + +L+ GA+++ G +H A + GH AV+ L
Sbjct: 76 SPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFL 126
Score = 32.7 bits (73), Expect = 1.6, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 43 WGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISSKTKVRGFY 102
+G + LL +GA+ + + G + +H AAR+G +++L+E GA ++
Sbjct: 51 FGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALP 110
Query: 103 I---LRSGHEAVIEML 115
I ++ GH AV+ L
Sbjct: 111 IHLAVQEGHTAVVSFL 126
>pdb|2FO1|E Chain E, Crystal Structure Of The Csl-Notch-Mastermind Ternary
Complex Bound To Dna
Length = 373
Score = 60.5 bits (145), Expect = 6e-09, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 62/116 (53%), Gaps = 1/116 (0%)
Query: 158 HIKVAKLLLQKDAPVDFQGKAPVDDVTVDYLTALHVAAHCGHARVAKTLL-DKKADPNAR 216
+ AKLL++K A VD+ G A D TALH AA + + K L+ +K ++ + +
Sbjct: 250 QVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNXPIVKYLVGEKGSNKDKQ 309
Query: 217 ALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 272
+G TP+ +A ++ RI+VV L++ GAS+EA +A N +V++
Sbjct: 310 DEDGKTPIXLAAQEGRIEVVXYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIF 365
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 54/203 (26%), Positives = 88/203 (43%), Gaps = 12/203 (5%)
Query: 1013 GAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTG---KYGHI 1069
GA V++ D T L +A + + A L + GA T K + LH +G
Sbjct: 156 GADVNAXDCDENTPLXLAVLARRRRLVAYLXKAGADPTIYNKSERSALHQAAANRDFGXX 215
Query: 1070 KVAKLLLQKDAPVDFQGKNGVTPLHVASH---YDHQNVALLLLEKGASMDIATTLLEYGA 1126
+ ++ +NG T L + +H D A LL+EKGA +D + A
Sbjct: 216 VYXLNSTKLKGDIEELDRNGXTALXIVAHNEGRDQVASAKLLVEKGAKVD-----YDGAA 270
Query: 1127 KPNAESVAGFTPLHLSASEGHADMSAMLL-EHGADVSHAAKNGLTPLHLCAQEDRVGVAE 1185
+ ++E G T LH +A + + L+ E G++ ++G TP+ L AQE R+ V
Sbjct: 271 RKDSEKYKGRTALHYAAQVSNXPIVKYLVGEKGSNKDKQDEDGKTPIXLAAQEGRIEVVX 330
Query: 1186 LLLKNNAQVDTPTKKGFTPLHIA 1208
L++ A V+ T +A
Sbjct: 331 YLIQQGASVEAVDATDHTARQLA 353
Score = 45.1 bits (105), Expect = 3e-04, Method: Composition-based stats.
Identities = 51/217 (23%), Positives = 89/217 (41%), Gaps = 15/217 (6%)
Query: 203 AKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 262
AK + AD NA + TPL +A R ++V L K GA + LH A
Sbjct: 149 AKECIAAGADVNAXDCDENTPLXLAVLARRRRLVAYLXKAGADPTIYNKSERSALHQAAA 208
Query: 263 KNRIKVVELLL---KHGASIEATTEVREPMLHIACK---KNRIKVVELLLKHGASIEATT 316
L K IE L I ++++ +LL++ GA ++
Sbjct: 209 NRDFGXXVYXLNSTKLKGDIEELDRNGXTALXIVAHNEGRDQVASAKLLVEKGAKVDYDG 268
Query: 317 EVRE--------PMLHIACKKNRIKVVELLL-KHGASIEATTEVREPMLHIACKKNRIKV 367
R+ LH A + + +V+ L+ + G++ + E + + +A ++ RI+V
Sbjct: 269 AARKDSEKYKGRTALHYAAQVSNXPIVKYLVGEKGSNKDKQDEDGKTPIXLAAQEGRIEV 328
Query: 368 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 404
V L++ GAS+EA +A N +V++
Sbjct: 329 VXYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIF 365
Score = 39.7 bits (91), Expect = 0.011, Method: Composition-based stats.
Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 9/106 (8%)
Query: 1008 LLLQHGAAVD---STTKDL-----YTALHIAAKEGQEEVAAVLL-ENGASLTSTTKKGFT 1058
LL++ GA VD + KD TALH AA+ + L+ E G++ + G T
Sbjct: 256 LLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNXPIVKYLVGEKGSNKDKQDEDGKT 315
Query: 1059 PLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNV 1104
P+ L + G I+V L+Q+ A V+ T +A +H N+
Sbjct: 316 PIXLAAQEGRIEVVXYLIQQGASVEAVDATDHTARQLAQANNHHNI 361
Score = 39.7 bits (91), Expect = 0.012, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 37/88 (42%)
Query: 1289 KGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSA 1348
KG T LH++AQ + IV L+ S G TP+ +A G+I + L+ Q A
Sbjct: 278 KGRTALHYAAQVSNXPIVKYLVGEKGSNKDKQDEDGKTPIXLAAQEGRIEVVXYLIQQGA 337
Query: 1349 NVSCTTDQGFTPLHHSAQQGHSTIVALL 1376
+V T + H IV +
Sbjct: 338 SVEAVDATDHTARQLAQANNHHNIVDIF 365
Score = 39.7 bits (91), Expect = 0.013, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 991 QTPLHIASRLGNVDIVMLLL-QHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASL 1049
+T LH A+++ N IV L+ + G+ D +D T + +AA+EG+ EV L++ GAS+
Sbjct: 280 RTALHYAAQVSNXPIVKYLVGEKGSNKDKQDEDGKTPIXLAAQEGRIEVVXYLIQQGASV 339
Query: 1050 TSTTKKGFTPLHLTGKYGHIKVAKLL 1075
+ T L H + +
Sbjct: 340 EAVDATDHTARQLAQANNHHNIVDIF 365
Score = 37.0 bits (84), Expect = 0.072, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 1313 GASPNATNKTRGFTPLHIACHYGQISMARLLL-DQSANVSCTTDQGFTPLHHSAQQGHST 1371
GA+ + K +G T LH A + + L+ ++ +N + G TP+ +AQ+G
Sbjct: 268 GAARKDSEKYKGRTALHYAAQVSNXPIVKYLVGEKGSNKDKQDEDGKTPIXLAAQEGRIE 327
Query: 1372 IVALLLDRGASPNATN 1387
+V L+ +GAS A +
Sbjct: 328 VVXYLIQQGASVEAVD 343
Score = 36.2 bits (82), Expect = 0.13, Method: Composition-based stats.
Identities = 46/210 (21%), Positives = 83/210 (39%), Gaps = 15/210 (7%)
Query: 276 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 335
GA + A L +A R ++V L K GA + LH A
Sbjct: 156 GADVNAXDCDENTPLXLAVLARRRRLVAYLXKAGADPTIYNKSERSALHQAAANRDFGXX 215
Query: 336 ELLL---KHGASIEATTEVREPMLHIACK---KNRIKVVELLLKHGASIEATTEVRE--- 386
L K IE L I ++++ +LL++ GA ++ R+
Sbjct: 216 VYXLNSTKLKGDIEELDRNGXTALXIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSE 275
Query: 387 -----PMLHIACKKNRIKVVELLL-KHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 440
LH A + + +V+ L+ + G++ + E + + +A ++ RI+VV L++
Sbjct: 276 KYKGRTALHYAAQVSNXPIVKYLVGEKGSNKDKQDEDGKTPIXLAAQEGRIEVVXYLIQQ 335
Query: 441 GASIEATTEVREPMLHIACKKNRIKVVELL 470
GAS+EA +A N +V++
Sbjct: 336 GASVEAVDATDHTARQLAQANNHHNIVDIF 365
Score = 36.2 bits (82), Expect = 0.13, Method: Composition-based stats.
Identities = 46/210 (21%), Positives = 83/210 (39%), Gaps = 15/210 (7%)
Query: 309 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 368
GA + A L +A R ++V L K GA + LH A
Sbjct: 156 GADVNAXDCDENTPLXLAVLARRRRLVAYLXKAGADPTIYNKSERSALHQAAANRDFGXX 215
Query: 369 ELLL---KHGASIEATTEVREPMLHIACK---KNRIKVVELLLKHGASIEATTEVRE--- 419
L K IE L I ++++ +LL++ GA ++ R+
Sbjct: 216 VYXLNSTKLKGDIEELDRNGXTALXIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSE 275
Query: 420 -----PMLHIACKKNRIKVVELLL-KHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 473
LH A + + +V+ L+ + G++ + E + + +A ++ RI+VV L++
Sbjct: 276 KYKGRTALHYAAQVSNXPIVKYLVGEKGSNKDKQDEDGKTPIXLAAQEGRIEVVXYLIQQ 335
Query: 474 GASIEATTEVREPMLHIACKKNRIKVVELL 503
GAS+EA +A N +V++
Sbjct: 336 GASVEAVDATDHTARQLAQANNHHNIVDIF 365
Score = 36.2 bits (82), Expect = 0.13, Method: Composition-based stats.
Identities = 46/210 (21%), Positives = 83/210 (39%), Gaps = 15/210 (7%)
Query: 342 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 401
GA + A L +A R ++V L K GA + LH A
Sbjct: 156 GADVNAXDCDENTPLXLAVLARRRRLVAYLXKAGADPTIYNKSERSALHQAAANRDFGXX 215
Query: 402 ELLL---KHGASIEATTEVREPMLHIACK---KNRIKVVELLLKHGASIEATTEVRE--- 452
L K IE L I ++++ +LL++ GA ++ R+
Sbjct: 216 VYXLNSTKLKGDIEELDRNGXTALXIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSE 275
Query: 453 -----PMLHIACKKNRIKVVELLL-KHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 506
LH A + + +V+ L+ + G++ + E + + +A ++ RI+VV L++
Sbjct: 276 KYKGRTALHYAAQVSNXPIVKYLVGEKGSNKDKQDEDGKTPIXLAAQEGRIEVVXYLIQQ 335
Query: 507 GASIEATTEVREPMLHIACKKNRIKVVELL 536
GAS+EA +A N +V++
Sbjct: 336 GASVEAVDATDHTARQLAQANNHHNIVDIF 365
Score = 36.2 bits (82), Expect = 0.13, Method: Composition-based stats.
Identities = 46/210 (21%), Positives = 83/210 (39%), Gaps = 15/210 (7%)
Query: 375 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 434
GA + A L +A R ++V L K GA + LH A
Sbjct: 156 GADVNAXDCDENTPLXLAVLARRRRLVAYLXKAGADPTIYNKSERSALHQAAANRDFGXX 215
Query: 435 ELLL---KHGASIEATTEVREPMLHIACK---KNRIKVVELLLKHGASIEATTEVRE--- 485
L K IE L I ++++ +LL++ GA ++ R+
Sbjct: 216 VYXLNSTKLKGDIEELDRNGXTALXIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSE 275
Query: 486 -----PMLHIACKKNRIKVVELLL-KHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 539
LH A + + +V+ L+ + G++ + E + + +A ++ RI+VV L++
Sbjct: 276 KYKGRTALHYAAQVSNXPIVKYLVGEKGSNKDKQDEDGKTPIXLAAQEGRIEVVXYLIQQ 335
Query: 540 GASIEATTEVREPMLHIACKKNRIKVVELL 569
GAS+EA +A N +V++
Sbjct: 336 GASVEAVDATDHTARQLAQANNHHNIVDIF 365
Score = 36.2 bits (82), Expect = 0.13, Method: Composition-based stats.
Identities = 46/210 (21%), Positives = 83/210 (39%), Gaps = 15/210 (7%)
Query: 408 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 467
GA + A L +A R ++V L K GA + LH A
Sbjct: 156 GADVNAXDCDENTPLXLAVLARRRRLVAYLXKAGADPTIYNKSERSALHQAAANRDFGXX 215
Query: 468 ELLL---KHGASIEATTEVREPMLHIACK---KNRIKVVELLLKHGASIEATTEVRE--- 518
L K IE L I ++++ +LL++ GA ++ R+
Sbjct: 216 VYXLNSTKLKGDIEELDRNGXTALXIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSE 275
Query: 519 -----PMLHIACKKNRIKVVELLL-KHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 572
LH A + + +V+ L+ + G++ + E + + +A ++ RI+VV L++
Sbjct: 276 KYKGRTALHYAAQVSNXPIVKYLVGEKGSNKDKQDEDGKTPIXLAAQEGRIEVVXYLIQQ 335
Query: 573 GASIEATTEVREPMLHIACKKNRIKVVELL 602
GAS+EA +A N +V++
Sbjct: 336 GASVEAVDATDHTARQLAQANNHHNIVDIF 365
Score = 36.2 bits (82), Expect = 0.13, Method: Composition-based stats.
Identities = 46/210 (21%), Positives = 83/210 (39%), Gaps = 15/210 (7%)
Query: 441 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 500
GA + A L +A R ++V L K GA + LH A
Sbjct: 156 GADVNAXDCDENTPLXLAVLARRRRLVAYLXKAGADPTIYNKSERSALHQAAANRDFGXX 215
Query: 501 ELLL---KHGASIEATTEVREPMLHIACK---KNRIKVVELLLKHGASIEATTEVRE--- 551
L K IE L I ++++ +LL++ GA ++ R+
Sbjct: 216 VYXLNSTKLKGDIEELDRNGXTALXIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSE 275
Query: 552 -----PMLHIACKKNRIKVVELLL-KHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 605
LH A + + +V+ L+ + G++ + E + + +A ++ RI+VV L++
Sbjct: 276 KYKGRTALHYAAQVSNXPIVKYLVGEKGSNKDKQDEDGKTPIXLAAQEGRIEVVXYLIQQ 335
Query: 606 GASIEATTEVREPMLHIACKKNRIKVVELL 635
GAS+EA +A N +V++
Sbjct: 336 GASVEAVDATDHTARQLAQANNHHNIVDIF 365
Score = 36.2 bits (82), Expect = 0.13, Method: Composition-based stats.
Identities = 46/210 (21%), Positives = 83/210 (39%), Gaps = 15/210 (7%)
Query: 474 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 533
GA + A L +A R ++V L K GA + LH A
Sbjct: 156 GADVNAXDCDENTPLXLAVLARRRRLVAYLXKAGADPTIYNKSERSALHQAAANRDFGXX 215
Query: 534 ELLL---KHGASIEATTEVREPMLHIACK---KNRIKVVELLLKHGASIEATTEVRE--- 584
L K IE L I ++++ +LL++ GA ++ R+
Sbjct: 216 VYXLNSTKLKGDIEELDRNGXTALXIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSE 275
Query: 585 -----PMLHIACKKNRIKVVELLL-KHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 638
LH A + + +V+ L+ + G++ + E + + +A ++ RI+VV L++
Sbjct: 276 KYKGRTALHYAAQVSNXPIVKYLVGEKGSNKDKQDEDGKTPIXLAAQEGRIEVVXYLIQQ 335
Query: 639 GASIEATTEVREPMLHIACKKNRIKVVELL 668
GAS+EA +A N +V++
Sbjct: 336 GASVEAVDATDHTARQLAQANNHHNIVDIF 365
Score = 36.2 bits (82), Expect = 0.13, Method: Composition-based stats.
Identities = 46/210 (21%), Positives = 83/210 (39%), Gaps = 15/210 (7%)
Query: 507 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 566
GA + A L +A R ++V L K GA + LH A
Sbjct: 156 GADVNAXDCDENTPLXLAVLARRRRLVAYLXKAGADPTIYNKSERSALHQAAANRDFGXX 215
Query: 567 ELLL---KHGASIEATTEVREPMLHIACK---KNRIKVVELLLKHGASIEATTEVRE--- 617
L K IE L I ++++ +LL++ GA ++ R+
Sbjct: 216 VYXLNSTKLKGDIEELDRNGXTALXIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSE 275
Query: 618 -----PMLHIACKKNRIKVVELLL-KHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 671
LH A + + +V+ L+ + G++ + E + + +A ++ RI+VV L++
Sbjct: 276 KYKGRTALHYAAQVSNXPIVKYLVGEKGSNKDKQDEDGKTPIXLAAQEGRIEVVXYLIQQ 335
Query: 672 GASIEATTEVREPMLHIACKKNRIKVVELL 701
GAS+EA +A N +V++
Sbjct: 336 GASVEAVDATDHTARQLAQANNHHNIVDIF 365
Score = 36.2 bits (82), Expect = 0.13, Method: Composition-based stats.
Identities = 46/210 (21%), Positives = 83/210 (39%), Gaps = 15/210 (7%)
Query: 540 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 599
GA + A L +A R ++V L K GA + LH A
Sbjct: 156 GADVNAXDCDENTPLXLAVLARRRRLVAYLXKAGADPTIYNKSERSALHQAAANRDFGXX 215
Query: 600 ELLL---KHGASIEATTEVREPMLHIACK---KNRIKVVELLLKHGASIEATTEVRE--- 650
L K IE L I ++++ +LL++ GA ++ R+
Sbjct: 216 VYXLNSTKLKGDIEELDRNGXTALXIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSE 275
Query: 651 -----PMLHIACKKNRIKVVELLL-KHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 704
LH A + + +V+ L+ + G++ + E + + +A ++ RI+VV L++
Sbjct: 276 KYKGRTALHYAAQVSNXPIVKYLVGEKGSNKDKQDEDGKTPIXLAAQEGRIEVVXYLIQQ 335
Query: 705 GASIEATTEVREPMLHIACKKNRIKVVELL 734
GAS+EA +A N +V++
Sbjct: 336 GASVEAVDATDHTARQLAQANNHHNIVDIF 365
Score = 36.2 bits (82), Expect = 0.13, Method: Composition-based stats.
Identities = 46/210 (21%), Positives = 83/210 (39%), Gaps = 15/210 (7%)
Query: 573 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 632
GA + A L +A R ++V L K GA + LH A
Sbjct: 156 GADVNAXDCDENTPLXLAVLARRRRLVAYLXKAGADPTIYNKSERSALHQAAANRDFGXX 215
Query: 633 ELLL---KHGASIEATTEVREPMLHIACK---KNRIKVVELLLKHGASIEATTEVRE--- 683
L K IE L I ++++ +LL++ GA ++ R+
Sbjct: 216 VYXLNSTKLKGDIEELDRNGXTALXIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSE 275
Query: 684 -----PMLHIACKKNRIKVVELLL-KHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 737
LH A + + +V+ L+ + G++ + E + + +A ++ RI+VV L++
Sbjct: 276 KYKGRTALHYAAQVSNXPIVKYLVGEKGSNKDKQDEDGKTPIXLAAQEGRIEVVXYLIQQ 335
Query: 738 GASIEATTEVREPMLHIACKKNRIKVVELL 767
GAS+EA +A N +V++
Sbjct: 336 GASVEAVDATDHTARQLAQANNHHNIVDIF 365
Score = 36.2 bits (82), Expect = 0.13, Method: Composition-based stats.
Identities = 46/210 (21%), Positives = 83/210 (39%), Gaps = 15/210 (7%)
Query: 606 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 665
GA + A L +A R ++V L K GA + LH A
Sbjct: 156 GADVNAXDCDENTPLXLAVLARRRRLVAYLXKAGADPTIYNKSERSALHQAAANRDFGXX 215
Query: 666 ELLL---KHGASIEATTEVREPMLHIACK---KNRIKVVELLLKHGASIEATTEVRE--- 716
L K IE L I ++++ +LL++ GA ++ R+
Sbjct: 216 VYXLNSTKLKGDIEELDRNGXTALXIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSE 275
Query: 717 -----PMLHIACKKNRIKVVELLL-KHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 770
LH A + + +V+ L+ + G++ + E + + +A ++ RI+VV L++
Sbjct: 276 KYKGRTALHYAAQVSNXPIVKYLVGEKGSNKDKQDEDGKTPIXLAAQEGRIEVVXYLIQQ 335
Query: 771 GASIEATTEVREPMLHIACKKNRIKVVELL 800
GAS+EA +A N +V++
Sbjct: 336 GASVEAVDATDHTARQLAQANNHHNIVDIF 365
Score = 36.2 bits (82), Expect = 0.13, Method: Composition-based stats.
Identities = 46/210 (21%), Positives = 83/210 (39%), Gaps = 15/210 (7%)
Query: 639 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 698
GA + A L +A R ++V L K GA + LH A
Sbjct: 156 GADVNAXDCDENTPLXLAVLARRRRLVAYLXKAGADPTIYNKSERSALHQAAANRDFGXX 215
Query: 699 ELLL---KHGASIEATTEVREPMLHIACK---KNRIKVVELLLKHGASIEATTEVRE--- 749
L K IE L I ++++ +LL++ GA ++ R+
Sbjct: 216 VYXLNSTKLKGDIEELDRNGXTALXIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSE 275
Query: 750 -----PMLHIACKKNRIKVVELLL-KHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 803
LH A + + +V+ L+ + G++ + E + + +A ++ RI+VV L++
Sbjct: 276 KYKGRTALHYAAQVSNXPIVKYLVGEKGSNKDKQDEDGKTPIXLAAQEGRIEVVXYLIQQ 335
Query: 804 GASIEATTEVREPMLHIACKKNRIKVVELL 833
GAS+EA +A N +V++
Sbjct: 336 GASVEAVDATDHTARQLAQANNHHNIVDIF 365
Score = 36.2 bits (82), Expect = 0.13, Method: Composition-based stats.
Identities = 46/210 (21%), Positives = 83/210 (39%), Gaps = 15/210 (7%)
Query: 672 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 731
GA + A L +A R ++V L K GA + LH A
Sbjct: 156 GADVNAXDCDENTPLXLAVLARRRRLVAYLXKAGADPTIYNKSERSALHQAAANRDFGXX 215
Query: 732 ELLL---KHGASIEATTEVREPMLHIACK---KNRIKVVELLLKHGASIEATTEVRE--- 782
L K IE L I ++++ +LL++ GA ++ R+
Sbjct: 216 VYXLNSTKLKGDIEELDRNGXTALXIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSE 275
Query: 783 -----PMLHIACKKNRIKVVELLL-KHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 836
LH A + + +V+ L+ + G++ + E + + +A ++ RI+VV L++
Sbjct: 276 KYKGRTALHYAAQVSNXPIVKYLVGEKGSNKDKQDEDGKTPIXLAAQEGRIEVVXYLIQQ 335
Query: 837 GASIEATTEVREPMLHIACKKNRIKVVELL 866
GAS+EA +A N +V++
Sbjct: 336 GASVEAVDATDHTARQLAQANNHHNIVDIF 365
Score = 36.2 bits (82), Expect = 0.13, Method: Composition-based stats.
Identities = 46/210 (21%), Positives = 83/210 (39%), Gaps = 15/210 (7%)
Query: 705 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 764
GA + A L +A R ++V L K GA + LH A
Sbjct: 156 GADVNAXDCDENTPLXLAVLARRRRLVAYLXKAGADPTIYNKSERSALHQAAANRDFGXX 215
Query: 765 ELLL---KHGASIEATTEVREPMLHIACK---KNRIKVVELLLKHGASIEATTEVRE--- 815
L K IE L I ++++ +LL++ GA ++ R+
Sbjct: 216 VYXLNSTKLKGDIEELDRNGXTALXIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSE 275
Query: 816 -----PMLHIACKKNRIKVVELLL-KHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 869
LH A + + +V+ L+ + G++ + E + + +A ++ RI+VV L++
Sbjct: 276 KYKGRTALHYAAQVSNXPIVKYLVGEKGSNKDKQDEDGKTPIXLAAQEGRIEVVXYLIQQ 335
Query: 870 GASIEATTEVREPMLHIACKKNRIKVVELL 899
GAS+EA +A N +V++
Sbjct: 336 GASVEAVDATDHTARQLAQANNHHNIVDIF 365
Score = 36.2 bits (82), Expect = 0.13, Method: Composition-based stats.
Identities = 46/210 (21%), Positives = 83/210 (39%), Gaps = 15/210 (7%)
Query: 738 GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 797
GA + A L +A R ++V L K GA + LH A
Sbjct: 156 GADVNAXDCDENTPLXLAVLARRRRLVAYLXKAGADPTIYNKSERSALHQAAANRDFGXX 215
Query: 798 ELLL---KHGASIEATTEVREPMLHIACK---KNRIKVVELLLKHGASIEATTEVRE--- 848
L K IE L I ++++ +LL++ GA ++ R+
Sbjct: 216 VYXLNSTKLKGDIEELDRNGXTALXIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSE 275
Query: 849 -----PMLHIACKKNRIKVVELLL-KHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 902
LH A + + +V+ L+ + G++ + E + + +A ++ RI+VV L++
Sbjct: 276 KYKGRTALHYAAQVSNXPIVKYLVGEKGSNKDKQDEDGKTPIXLAAQEGRIEVVXYLIQQ 335
Query: 903 GASIEATTEVREPMLHIACKKNRIKVVELL 932
GAS+EA +A N +V++
Sbjct: 336 GASVEAVDATDHTARQLAQANNHHNIVDIF 365
>pdb|2ZGG|A Chain A, Asn-Hydroxylation Stabilises The Ankyrin Repeat Domain Fold
Length = 92
Score = 60.5 bits (145), Expect = 7e-09, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 52/87 (59%)
Query: 1022 DLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAP 1081
DL L AA+ GQ++ +L+ NGA + + K G TPLHL + GH++V KLLL+ A
Sbjct: 5 DLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGAD 64
Query: 1082 VDFQGKNGVTPLHVASHYDHQNVALLL 1108
V+ Q K G T ++ ++++A +L
Sbjct: 65 VNAQDKFGKTAFDISIDNGNEDLAEIL 91
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/79 (37%), Positives = 53/79 (67%), Gaps = 3/79 (3%)
Query: 40 AAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISSKTKV- 98
AA+ G+ + V +L++ GA++ K ++G T LH AAR+GH V+++LLE GA ++++ K
Sbjct: 13 AARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVNAQDKFG 72
Query: 99 -RGFYI-LRSGHEAVIEML 115
F I + +G+E + E+L
Sbjct: 73 KTAFDISIDNGNEDLAEIL 91
Score = 50.8 bits (120), Expect = 5e-06, Method: Composition-based stats.
Identities = 30/79 (37%), Positives = 43/79 (54%)
Query: 1142 SASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKG 1201
+A G D +L+ +GADV+ KNG TPLHL A+ + V +LLL+ A V+ K G
Sbjct: 13 AARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVNAQDKFG 72
Query: 1202 FTPLHIACHYGQISMARLL 1220
T I+ G +A +L
Sbjct: 73 KTAFDISIDNGNEDLAEIL 91
Score = 48.1 bits (113), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 46/79 (58%)
Query: 997 ASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKG 1056
A+R G D V +L+ +GA V + K+ T LH+AA+ G EV +LLE GA + + K G
Sbjct: 13 AARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVNAQDKFG 72
Query: 1057 FTPLHLTGKYGHIKVAKLL 1075
T ++ G+ +A++L
Sbjct: 73 KTAFDISIDNGNEDLAEIL 91
Score = 47.4 bits (111), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 131 VLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGK--APVDDVTVD 186
+L+ NGA + + K G TPLHL + GH++V KLLL+ A V+ Q K D+++D
Sbjct: 24 ILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVNAQDKFGKTAFDISID 81
Score = 46.2 bits (108), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 33/58 (56%)
Query: 1331 ACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATNK 1388
A GQ R+L+ A+V+ G TPLH +A+ GH +V LLL+ GA NA +K
Sbjct: 13 AARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVNAQDK 70
Score = 45.8 bits (107), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 1262 LHHSAQQGHSTIVALLLDRGASPNATNK-GFTPLHHSAQQGHSTIVALLLDRGASPNATN 1320
L +A+ G V +L+ GA A +K G TPLH +A+ GH +V LLL+ GA NA +
Sbjct: 10 LLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVNAQD 69
Query: 1321 KTRGFTPLHIACHYGQISMARLL 1343
K G T I+ G +A +L
Sbjct: 70 KF-GKTAFDISIDNGNEDLAEIL 91
Score = 45.1 bits (105), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 40/82 (48%)
Query: 1106 LLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAA 1165
LL + D L+ GA A+ G TPLHL+A GH ++ +LLE GADV+
Sbjct: 10 LLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVNAQD 69
Query: 1166 KNGLTPLHLCAQEDRVGVAELL 1187
K G T + +AE+L
Sbjct: 70 KFGKTAFDISIDNGNEDLAEIL 91
Score = 43.9 bits (102), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 992 TPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVL 1042
TPLH+A+R G++++V LLL+ GA V++ K TA I+ G E++A +L
Sbjct: 41 TPLHLAARNGHLEVVKLLLEAGADVNAQDKFGKTAFDISIDNGNEDLAEIL 91
Score = 43.5 bits (101), Expect = 8e-04, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 40/79 (50%)
Query: 194 AAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVR 253
AA G + L+ AD A+ NG TPLH+A + ++VV+LLL+ GA + A +
Sbjct: 13 AARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVNAQDKFG 72
Query: 254 EPMLHIACKKNRIKVVELL 272
+ I+ + E+L
Sbjct: 73 KTAFDISIDNGNEDLAEIL 91
Score = 41.6 bits (96), Expect = 0.003, Method: Composition-based stats.
Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 13/91 (14%)
Query: 1064 GKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLE 1123
+ G ++L+ A V + KNG TPLH+A+ H V LLLE GA +
Sbjct: 14 ARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADV-------- 65
Query: 1124 YGAKPNAESVAGFTPLHLSASEGHADMSAML 1154
NA+ G T +S G+ D++ +L
Sbjct: 66 -----NAQDKFGKTAFDISIDNGNEDLAEIL 91
Score = 40.0 bits (92), Expect = 0.009, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Query: 1294 LHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCT 1353
L +A+ G V +L+ GA A +K G TPLH+A G + + +LLL+ A+V+
Sbjct: 10 LLEAARAGQDDEVRILMANGADVAAKDKN-GSTPLHLAARNGHLEVVKLLLEAGADVNAQ 68
Query: 1354 TDQGFTPLHHSAQQGHSTIVALL 1376
G T S G+ + +L
Sbjct: 69 DKFGKTAFDISIDNGNEDLAEIL 91
Score = 39.3 bits (90), Expect = 0.015, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 1176 AQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNF 1233
Q+D V +L+ N A V K G TPLH+A G + + +LLL+ A+V F
Sbjct: 17 GQDDEV---RILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVNAQDKF 71
Score = 39.3 bits (90), Expect = 0.015, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 33/51 (64%)
Query: 35 TPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEML 85
TPLH+AA+ G +V LLL GA+++ + + G TA + +G+E + E+L
Sbjct: 41 TPLHLAARNGHLEVVKLLLEAGADVNAQDKFGKTAFDISIDNGNEDLAEIL 91
Score = 37.7 bits (86), Expect = 0.048, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 1258 GFTPLHHSAQQGHSTIVALLLDRGASPNATNK-GFTPLHHSAQQGHSTIVALL 1309
G TPLH +A+ GH +V LLL+ GA NA +K G T S G+ + +L
Sbjct: 39 GSTPLHLAARNGHLEVVKLLLEAGADVNAQDKFGKTAFDISIDNGNEDLAEIL 91
Score = 34.3 bits (77), Expect = 0.54, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 36/70 (51%)
Query: 236 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 295
V +L+ +GA + A + LH+A + ++VV+LLL+ GA + A + + I+
Sbjct: 22 VRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVNAQDKFGKTAFDISID 81
Query: 296 KNRIKVVELL 305
+ E+L
Sbjct: 82 NGNEDLAEIL 91
Score = 34.3 bits (77), Expect = 0.54, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 36/70 (51%)
Query: 269 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 328
V +L+ +GA + A + LH+A + ++VV+LLL+ GA + A + + I+
Sbjct: 22 VRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVNAQDKFGKTAFDISID 81
Query: 329 KNRIKVVELL 338
+ E+L
Sbjct: 82 NGNEDLAEIL 91
Score = 34.3 bits (77), Expect = 0.54, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 36/70 (51%)
Query: 302 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 361
V +L+ +GA + A + LH+A + ++VV+LLL+ GA + A + + I+
Sbjct: 22 VRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVNAQDKFGKTAFDISID 81
Query: 362 KNRIKVVELL 371
+ E+L
Sbjct: 82 NGNEDLAEIL 91
Score = 34.3 bits (77), Expect = 0.54, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 36/70 (51%)
Query: 335 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 394
V +L+ +GA + A + LH+A + ++VV+LLL+ GA + A + + I+
Sbjct: 22 VRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVNAQDKFGKTAFDISID 81
Query: 395 KNRIKVVELL 404
+ E+L
Sbjct: 82 NGNEDLAEIL 91
Score = 34.3 bits (77), Expect = 0.54, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 36/70 (51%)
Query: 368 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 427
V +L+ +GA + A + LH+A + ++VV+LLL+ GA + A + + I+
Sbjct: 22 VRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVNAQDKFGKTAFDISID 81
Query: 428 KNRIKVVELL 437
+ E+L
Sbjct: 82 NGNEDLAEIL 91
Score = 34.3 bits (77), Expect = 0.54, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 36/70 (51%)
Query: 401 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 460
V +L+ +GA + A + LH+A + ++VV+LLL+ GA + A + + I+
Sbjct: 22 VRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVNAQDKFGKTAFDISID 81
Query: 461 KNRIKVVELL 470
+ E+L
Sbjct: 82 NGNEDLAEIL 91
Score = 34.3 bits (77), Expect = 0.54, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 36/70 (51%)
Query: 434 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 493
V +L+ +GA + A + LH+A + ++VV+LLL+ GA + A + + I+
Sbjct: 22 VRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVNAQDKFGKTAFDISID 81
Query: 494 KNRIKVVELL 503
+ E+L
Sbjct: 82 NGNEDLAEIL 91
Score = 34.3 bits (77), Expect = 0.54, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 36/70 (51%)
Query: 467 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 526
V +L+ +GA + A + LH+A + ++VV+LLL+ GA + A + + I+
Sbjct: 22 VRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVNAQDKFGKTAFDISID 81
Query: 527 KNRIKVVELL 536
+ E+L
Sbjct: 82 NGNEDLAEIL 91
Score = 34.3 bits (77), Expect = 0.54, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 36/70 (51%)
Query: 500 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 559
V +L+ +GA + A + LH+A + ++VV+LLL+ GA + A + + I+
Sbjct: 22 VRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVNAQDKFGKTAFDISID 81
Query: 560 KNRIKVVELL 569
+ E+L
Sbjct: 82 NGNEDLAEIL 91
Score = 34.3 bits (77), Expect = 0.54, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 36/70 (51%)
Query: 533 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 592
V +L+ +GA + A + LH+A + ++VV+LLL+ GA + A + + I+
Sbjct: 22 VRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVNAQDKFGKTAFDISID 81
Query: 593 KNRIKVVELL 602
+ E+L
Sbjct: 82 NGNEDLAEIL 91
Score = 34.3 bits (77), Expect = 0.54, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 36/70 (51%)
Query: 566 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 625
V +L+ +GA + A + LH+A + ++VV+LLL+ GA + A + + I+
Sbjct: 22 VRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVNAQDKFGKTAFDISID 81
Query: 626 KNRIKVVELL 635
+ E+L
Sbjct: 82 NGNEDLAEIL 91
Score = 34.3 bits (77), Expect = 0.54, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 36/70 (51%)
Query: 599 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 658
V +L+ +GA + A + LH+A + ++VV+LLL+ GA + A + + I+
Sbjct: 22 VRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVNAQDKFGKTAFDISID 81
Query: 659 KNRIKVVELL 668
+ E+L
Sbjct: 82 NGNEDLAEIL 91
Score = 34.3 bits (77), Expect = 0.54, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 36/70 (51%)
Query: 632 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 691
V +L+ +GA + A + LH+A + ++VV+LLL+ GA + A + + I+
Sbjct: 22 VRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVNAQDKFGKTAFDISID 81
Query: 692 KNRIKVVELL 701
+ E+L
Sbjct: 82 NGNEDLAEIL 91
Score = 34.3 bits (77), Expect = 0.54, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 36/70 (51%)
Query: 665 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 724
V +L+ +GA + A + LH+A + ++VV+LLL+ GA + A + + I+
Sbjct: 22 VRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVNAQDKFGKTAFDISID 81
Query: 725 KNRIKVVELL 734
+ E+L
Sbjct: 82 NGNEDLAEIL 91
Score = 34.3 bits (77), Expect = 0.54, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 36/70 (51%)
Query: 698 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 757
V +L+ +GA + A + LH+A + ++VV+LLL+ GA + A + + I+
Sbjct: 22 VRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVNAQDKFGKTAFDISID 81
Query: 758 KNRIKVVELL 767
+ E+L
Sbjct: 82 NGNEDLAEIL 91
Score = 34.3 bits (77), Expect = 0.54, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 36/70 (51%)
Query: 731 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 790
V +L+ +GA + A + LH+A + ++VV+LLL+ GA + A + + I+
Sbjct: 22 VRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVNAQDKFGKTAFDISID 81
Query: 791 KNRIKVVELL 800
+ E+L
Sbjct: 82 NGNEDLAEIL 91
Score = 34.3 bits (77), Expect = 0.54, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 36/70 (51%)
Query: 764 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 823
V +L+ +GA + A + LH+A + ++VV+LLL+ GA + A + + I+
Sbjct: 22 VRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVNAQDKFGKTAFDISID 81
Query: 824 KNRIKVVELL 833
+ E+L
Sbjct: 82 NGNEDLAEIL 91
Score = 34.3 bits (77), Expect = 0.54, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 36/70 (51%)
Query: 797 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 856
V +L+ +GA + A + LH+A + ++VV+LLL+ GA + A + + I+
Sbjct: 22 VRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVNAQDKFGKTAFDISID 81
Query: 857 KNRIKVVELL 866
+ E+L
Sbjct: 82 NGNEDLAEIL 91
Score = 34.3 bits (77), Expect = 0.54, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 36/70 (51%)
Query: 830 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 889
V +L+ +GA + A + LH+A + ++VV+LLL+ GA + A + + I+
Sbjct: 22 VRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVNAQDKFGKTAFDISID 81
Query: 890 KNRIKVVELL 899
+ E+L
Sbjct: 82 NGNEDLAEIL 91
Score = 34.3 bits (77), Expect = 0.54, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 36/70 (51%)
Query: 863 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 922
V +L+ +GA + A + LH+A + ++VV+LLL+ GA + A + + I+
Sbjct: 22 VRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVNAQDKFGKTAFDISID 81
Query: 923 KNRIKVVELL 932
+ E+L
Sbjct: 82 NGNEDLAEIL 91
Score = 33.5 bits (75), Expect = 0.91, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 26/51 (50%)
Query: 189 TALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELL 239
T LH+AA GH V K LL+ AD NA+ G T I+ + E+L
Sbjct: 41 TPLHLAARNGHLEVVKLLLEAGADVNAQDKFGKTAFDISIDNGNEDLAEIL 91
Score = 32.0 bits (71), Expect = 2.4, Method: Composition-based stats.
Identities = 18/71 (25%), Positives = 37/71 (52%)
Query: 896 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASSHVVSCYSNVKVHVSLN 955
V +L+ +GA + A + LH+A + ++VV+LLL+ GA + + +S++
Sbjct: 22 VRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVNAQDKFGKTAFDISID 81
Query: 956 KIQDVSSSILR 966
+ + IL+
Sbjct: 82 NGNEDLAEILQ 92
>pdb|2ZGD|A Chain A, Asn-Hydroxylation Stabilises The Ankyrin Repeat Domain Fold
Length = 110
Score = 60.1 bits (144), Expect = 7e-09, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 51/87 (58%)
Query: 1022 DLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAP 1081
DL L AA+ GQ++ +L+ NGA + + K G TPLHL + GH++V KLLL+ A
Sbjct: 23 DLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGAD 82
Query: 1082 VDFQGKNGVTPLHVASHYDHQNVALLL 1108
V Q K G T ++ ++++A +L
Sbjct: 83 VXAQDKFGKTAFDISIDNGNEDLAEIL 109
Score = 55.1 bits (131), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 59/95 (62%), Gaps = 4/95 (4%)
Query: 25 PFGSHFQHNI-TPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIE 83
P GSH ++ L AA+ G+ + V +L++ GA++ K ++G T LH AAR+GH V++
Sbjct: 15 PRGSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVK 74
Query: 84 MLLEQGAPISSKTKV--RGFYI-LRSGHEAVIEML 115
+LLE GA + ++ K F I + +G+E + E+L
Sbjct: 75 LLLEAGADVXAQDKFGKTAFDISIDNGNEDLAEIL 109
Score = 50.4 bits (119), Expect = 7e-06, Method: Composition-based stats.
Identities = 30/79 (37%), Positives = 42/79 (53%)
Query: 1142 SASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKG 1201
+A G D +L+ +GADV+ KNG TPLHL A+ + V +LLL+ A V K G
Sbjct: 31 AARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFG 90
Query: 1202 FTPLHIACHYGQISMARLL 1220
T I+ G +A +L
Sbjct: 91 KTAFDISIDNGNEDLAEIL 109
Score = 48.5 bits (114), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 46/79 (58%)
Query: 997 ASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKG 1056
A+R G D V +L+ +GA V + K+ T LH+AA+ G EV +LLE GA + + K G
Sbjct: 31 AARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFG 90
Query: 1057 FTPLHLTGKYGHIKVAKLL 1075
T ++ G+ +A++L
Sbjct: 91 KTAFDISIDNGNEDLAEIL 109
Score = 47.0 bits (110), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 131 VLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGK--APVDDVTVD 186
+L+ NGA + + K G TPLHL + GH++V KLLL+ A V Q K D+++D
Sbjct: 42 ILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISID 99
Score = 45.1 bits (105), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 39/82 (47%)
Query: 1106 LLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAA 1165
LL + D L+ GA A+ G TPLHL+A GH ++ +LLE GADV
Sbjct: 28 LLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQD 87
Query: 1166 KNGLTPLHLCAQEDRVGVAELL 1187
K G T + +AE+L
Sbjct: 88 KFGKTAFDISIDNGNEDLAEIL 109
Score = 43.9 bits (102), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 32/58 (55%)
Query: 1331 ACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATNK 1388
A GQ R+L+ A+V+ G TPLH +A+ GH +V LLL+ GA A +K
Sbjct: 31 AARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDK 88
Score = 43.9 bits (102), Expect = 7e-04, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 40/79 (50%)
Query: 194 AAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVR 253
AA G + L+ AD A+ NG TPLH+A + ++VV+LLL+ GA + A +
Sbjct: 31 AARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFG 90
Query: 254 EPMLHIACKKNRIKVVELL 272
+ I+ + E+L
Sbjct: 91 KTAFDISIDNGNEDLAEIL 109
Score = 43.5 bits (101), Expect = 7e-04, Method: Composition-based stats.
Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 1262 LHHSAQQGHSTIVALLLDRGASPNATNK-GFTPLHHSAQQGHSTIVALLLDRGASPNATN 1320
L +A+ G V +L+ GA A +K G TPLH +A+ GH +V LLL+ GA A +
Sbjct: 28 LLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQD 87
Query: 1321 KTRGFTPLHIACHYGQISMARLL 1343
K G T I+ G +A +L
Sbjct: 88 KF-GKTAFDISIDNGNEDLAEIL 109
Score = 43.5 bits (101), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 34/51 (66%)
Query: 992 TPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVL 1042
TPLH+A+R G++++V LLL+ GA V + K TA I+ G E++A +L
Sbjct: 59 TPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNGNEDLAEIL 109
Score = 40.0 bits (92), Expect = 0.009, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Query: 1294 LHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCT 1353
L +A+ G V +L+ GA A +K G TPLH+A G + + +LLL+ A+V
Sbjct: 28 LLEAARAGQDDEVRILMANGADVAAKDKN-GSTPLHLAARNGHLEVVKLLLEAGADVXAQ 86
Query: 1354 TDQGFTPLHHSAQQGHSTIVALL 1376
G T S G+ + +L
Sbjct: 87 DKFGKTAFDISIDNGNEDLAEIL 109
Score = 39.7 bits (91), Expect = 0.013, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 1176 AQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNF 1233
Q+D V +L+ N A V K G TPLH+A G + + +LLL+ A+V F
Sbjct: 35 GQDDEV---RILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKF 89
Score = 39.3 bits (90), Expect = 0.014, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 13/91 (14%)
Query: 1064 GKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLE 1123
+ G ++L+ A V + KNG TPLH+A+ H V LLLE GA +
Sbjct: 32 ARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADV-------- 83
Query: 1124 YGAKPNAESVAGFTPLHLSASEGHADMSAML 1154
A+ G T +S G+ D++ +L
Sbjct: 84 -----XAQDKFGKTAFDISIDNGNEDLAEIL 109
Score = 35.4 bits (80), Expect = 0.22, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 1258 GFTPLHHSAQQGHSTIVALLLDRGASPNATNK-GFTPLHHSAQQGHSTIVALL 1309
G TPLH +A+ GH +V LLL+ GA A +K G T S G+ + +L
Sbjct: 57 GSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNGNEDLAEIL 109
Score = 34.3 bits (77), Expect = 0.50, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 36/70 (51%)
Query: 236 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 295
V +L+ +GA + A + LH+A + ++VV+LLL+ GA + A + + I+
Sbjct: 40 VRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISID 99
Query: 296 KNRIKVVELL 305
+ E+L
Sbjct: 100 NGNEDLAEIL 109
Score = 34.3 bits (77), Expect = 0.50, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 36/70 (51%)
Query: 269 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 328
V +L+ +GA + A + LH+A + ++VV+LLL+ GA + A + + I+
Sbjct: 40 VRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISID 99
Query: 329 KNRIKVVELL 338
+ E+L
Sbjct: 100 NGNEDLAEIL 109
Score = 34.3 bits (77), Expect = 0.50, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 36/70 (51%)
Query: 302 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 361
V +L+ +GA + A + LH+A + ++VV+LLL+ GA + A + + I+
Sbjct: 40 VRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISID 99
Query: 362 KNRIKVVELL 371
+ E+L
Sbjct: 100 NGNEDLAEIL 109
Score = 34.3 bits (77), Expect = 0.50, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 36/70 (51%)
Query: 335 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 394
V +L+ +GA + A + LH+A + ++VV+LLL+ GA + A + + I+
Sbjct: 40 VRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISID 99
Query: 395 KNRIKVVELL 404
+ E+L
Sbjct: 100 NGNEDLAEIL 109
Score = 34.3 bits (77), Expect = 0.50, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 36/70 (51%)
Query: 368 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 427
V +L+ +GA + A + LH+A + ++VV+LLL+ GA + A + + I+
Sbjct: 40 VRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISID 99
Query: 428 KNRIKVVELL 437
+ E+L
Sbjct: 100 NGNEDLAEIL 109
Score = 34.3 bits (77), Expect = 0.50, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 36/70 (51%)
Query: 401 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 460
V +L+ +GA + A + LH+A + ++VV+LLL+ GA + A + + I+
Sbjct: 40 VRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISID 99
Query: 461 KNRIKVVELL 470
+ E+L
Sbjct: 100 NGNEDLAEIL 109
Score = 34.3 bits (77), Expect = 0.50, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 36/70 (51%)
Query: 434 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 493
V +L+ +GA + A + LH+A + ++VV+LLL+ GA + A + + I+
Sbjct: 40 VRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISID 99
Query: 494 KNRIKVVELL 503
+ E+L
Sbjct: 100 NGNEDLAEIL 109
Score = 34.3 bits (77), Expect = 0.50, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 36/70 (51%)
Query: 467 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 526
V +L+ +GA + A + LH+A + ++VV+LLL+ GA + A + + I+
Sbjct: 40 VRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISID 99
Query: 527 KNRIKVVELL 536
+ E+L
Sbjct: 100 NGNEDLAEIL 109
Score = 34.3 bits (77), Expect = 0.50, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 36/70 (51%)
Query: 500 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 559
V +L+ +GA + A + LH+A + ++VV+LLL+ GA + A + + I+
Sbjct: 40 VRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISID 99
Query: 560 KNRIKVVELL 569
+ E+L
Sbjct: 100 NGNEDLAEIL 109
Score = 34.3 bits (77), Expect = 0.50, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 36/70 (51%)
Query: 533 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 592
V +L+ +GA + A + LH+A + ++VV+LLL+ GA + A + + I+
Sbjct: 40 VRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISID 99
Query: 593 KNRIKVVELL 602
+ E+L
Sbjct: 100 NGNEDLAEIL 109
Score = 34.3 bits (77), Expect = 0.50, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 36/70 (51%)
Query: 566 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 625
V +L+ +GA + A + LH+A + ++VV+LLL+ GA + A + + I+
Sbjct: 40 VRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISID 99
Query: 626 KNRIKVVELL 635
+ E+L
Sbjct: 100 NGNEDLAEIL 109
Score = 34.3 bits (77), Expect = 0.50, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 36/70 (51%)
Query: 599 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 658
V +L+ +GA + A + LH+A + ++VV+LLL+ GA + A + + I+
Sbjct: 40 VRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISID 99
Query: 659 KNRIKVVELL 668
+ E+L
Sbjct: 100 NGNEDLAEIL 109
Score = 34.3 bits (77), Expect = 0.50, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 36/70 (51%)
Query: 632 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 691
V +L+ +GA + A + LH+A + ++VV+LLL+ GA + A + + I+
Sbjct: 40 VRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISID 99
Query: 692 KNRIKVVELL 701
+ E+L
Sbjct: 100 NGNEDLAEIL 109
Score = 34.3 bits (77), Expect = 0.50, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 36/70 (51%)
Query: 665 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 724
V +L+ +GA + A + LH+A + ++VV+LLL+ GA + A + + I+
Sbjct: 40 VRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISID 99
Query: 725 KNRIKVVELL 734
+ E+L
Sbjct: 100 NGNEDLAEIL 109
Score = 34.3 bits (77), Expect = 0.50, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 36/70 (51%)
Query: 698 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 757
V +L+ +GA + A + LH+A + ++VV+LLL+ GA + A + + I+
Sbjct: 40 VRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISID 99
Query: 758 KNRIKVVELL 767
+ E+L
Sbjct: 100 NGNEDLAEIL 109
Score = 34.3 bits (77), Expect = 0.50, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 36/70 (51%)
Query: 731 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 790
V +L+ +GA + A + LH+A + ++VV+LLL+ GA + A + + I+
Sbjct: 40 VRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISID 99
Query: 791 KNRIKVVELL 800
+ E+L
Sbjct: 100 NGNEDLAEIL 109
Score = 34.3 bits (77), Expect = 0.50, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 36/70 (51%)
Query: 764 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 823
V +L+ +GA + A + LH+A + ++VV+LLL+ GA + A + + I+
Sbjct: 40 VRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISID 99
Query: 824 KNRIKVVELL 833
+ E+L
Sbjct: 100 NGNEDLAEIL 109
Score = 34.3 bits (77), Expect = 0.50, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 36/70 (51%)
Query: 797 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 856
V +L+ +GA + A + LH+A + ++VV+LLL+ GA + A + + I+
Sbjct: 40 VRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISID 99
Query: 857 KNRIKVVELL 866
+ E+L
Sbjct: 100 NGNEDLAEIL 109
Score = 34.3 bits (77), Expect = 0.50, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 36/70 (51%)
Query: 830 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 889
V +L+ +GA + A + LH+A + ++VV+LLL+ GA + A + + I+
Sbjct: 40 VRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISID 99
Query: 890 KNRIKVVELL 899
+ E+L
Sbjct: 100 NGNEDLAEIL 109
Score = 34.3 bits (77), Expect = 0.50, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 36/70 (51%)
Query: 863 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 922
V +L+ +GA + A + LH+A + ++VV+LLL+ GA + A + + I+
Sbjct: 40 VRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISID 99
Query: 923 KNRIKVVELL 932
+ E+L
Sbjct: 100 NGNEDLAEIL 109
Score = 31.6 bits (70), Expect = 3.3, Method: Composition-based stats.
Identities = 18/71 (25%), Positives = 36/71 (50%)
Query: 896 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASSHVVSCYSNVKVHVSLN 955
V +L+ +GA + A + LH+A + ++VV+LLL+ GA + +S++
Sbjct: 40 VRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISID 99
Query: 956 KIQDVSSSILR 966
+ + IL+
Sbjct: 100 NGNEDLAEILQ 110
Score = 31.2 bits (69), Expect = 4.5, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 25/51 (49%)
Query: 189 TALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELL 239
T LH+AA GH V K LL+ AD A+ G T I+ + E+L
Sbjct: 59 TPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNGNEDLAEIL 109
>pdb|3HRA|A Chain A, Crystal Structure Of Ef0377 An Ankyrin Repeat Protein
Length = 201
Score = 60.1 bits (144), Expect = 8e-09, Method: Composition-based stats.
Identities = 55/213 (25%), Positives = 94/213 (44%), Gaps = 33/213 (15%)
Query: 1172 LHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPK 1231
L Q D V E+L QVD +G TPL+IA H I +A+ L+D+ A++ +
Sbjct: 10 LEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQN 69
Query: 1232 NFPSRXXXXXXXXXXXXXXYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASP--NATNK 1289
+ +P ++ QG + I+A +L + A+P N N+
Sbjct: 70 SISD------------------------SPYLYAGAQGRTEILAYML-KHATPDLNKHNR 104
Query: 1290 -GFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQ-----ISMARLL 1343
G L +A++GH V LLL+ G G+T L A + + +LL
Sbjct: 105 YGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLL 164
Query: 1344 LDQSANVSCTTDQGFTPLHHSAQQGHSTIVALL 1376
++ A+ S + G T + ++ Q+G++ I +L
Sbjct: 165 MENGADQSIKDNSGRTAMDYANQKGYTEISKIL 197
Score = 47.4 bits (111), Expect = 6e-05, Method: Composition-based stats.
Identities = 54/203 (26%), Positives = 96/203 (47%), Gaps = 20/203 (9%)
Query: 883 MLHIACKKNRIKVVELLLKHGASI-EATTEVREPMLHIACKKNRIKVVELLLKHGASSHV 941
+L A +++ KV E+L + E TE P L+IA N I++ + L+ GA ++
Sbjct: 9 LLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTP-LNIAVHNNDIEIAKALIDRGADINL 67
Query: 942 VSCYSNVK-VHVSLNKIQDVSSSILRLATCDVLPQCETRLNFSNLRVREQQTPLHIASRL 1000
+ S+ ++ ++ + +L+ AT D LN N R L A+
Sbjct: 68 QNSISDSPYLYAGAQGRTEILAYMLKHATPD--------LNKHN---RYGGNALIPAAEK 116
Query: 1001 GNVDIVMLLLQHGAA-VDSTTKDLYTAL--HIAAKEGQE---EVAAVLLENGASLTSTTK 1054
G++D V LLL+ G +D YTAL + +EG + ++ +L+ENGA +
Sbjct: 117 GHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDN 176
Query: 1055 KGFTPLHLTGKYGHIKVAKLLLQ 1077
G T + + G+ +++K+L Q
Sbjct: 177 SGRTAMDYANQKGYTEISKILAQ 199
Score = 43.9 bits (102), Expect = 7e-04, Method: Composition-based stats.
Identities = 43/181 (23%), Positives = 75/181 (41%), Gaps = 16/181 (8%)
Query: 1016 VDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLL 1075
VD + T L+IA E+A L++ GA + +P G G ++ +
Sbjct: 32 VDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYM 91
Query: 1076 LQKDAPVDFQ-----GKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNA 1130
L+ P D G N + P H D NV LLL + +D ++G
Sbjct: 92 LKHATP-DLNKHNRYGGNALIPAAEKGHID--NVKLLLEDGREDIDFQN---DFGYTALI 145
Query: 1131 ESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKN 1190
E+V ++ + D+ +L+E+GAD S +G T + Q+ ++++L +
Sbjct: 146 EAVG-----LREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQY 200
Query: 1191 N 1191
N
Sbjct: 201 N 201
Score = 42.4 bits (98), Expect = 0.002, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 1322 TRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGA 1381
T G TPL+IA H I +A+ L+D+ A+++ +P ++ QG + I+A +L + A
Sbjct: 37 TEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYML-KHA 95
Query: 1382 SPN 1384
+P+
Sbjct: 96 TPD 98
Score = 40.0 bits (92), Expect = 0.009, Method: Composition-based stats.
Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 1/98 (1%)
Query: 180 VDDVTVDYLTALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELL 239
VD+V + T L++A H +AK L+D+ AD N + +P A + R +++ +
Sbjct: 32 VDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYM 91
Query: 240 LKHGA-SIEATTEVREPMLHIACKKNRIKVVELLLKHG 276
LKH + L A +K I V+LLL+ G
Sbjct: 92 LKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDG 129
Score = 39.7 bits (91), Expect = 0.011, Method: Composition-based stats.
Identities = 48/208 (23%), Positives = 85/208 (40%), Gaps = 20/208 (9%)
Query: 1020 TKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKD 1079
T ++ L A + ++V +L + + +G TPL++ I++AK L+ +
Sbjct: 3 TYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRG 62
Query: 1080 APVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPL 1139
A ++ Q +P A + +L K A+ D+ N + G L
Sbjct: 63 ADINLQNSISDSPYLYAGAQGRTEILAYML-KHATPDL-----------NKHNRYGGNAL 110
Query: 1140 HLSASEGHADMSAMLLEHG-ADVSHAAKNGLTPLHLCAQEDRVG------VAELLLKNNA 1192
+A +GH D +LLE G D+ G T L + A R G + +LL++N A
Sbjct: 111 IPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTAL-IEAVGLREGNQLYQDIVKLLMENGA 169
Query: 1193 QVDTPTKKGFTPLHIACHYGQISMARLL 1220
G T + A G ++++L
Sbjct: 170 DQSIKDNSGRTAMDYANQKGYTEISKIL 197
Score = 37.7 bits (86), Expect = 0.046, Method: Composition-based stats.
Identities = 34/136 (25%), Positives = 62/136 (45%), Gaps = 13/136 (9%)
Query: 35 TPLHVAAKWGKANMVTLLLSRGA-NIDNKTRDGLTALHCAARSGHEAVIEMLLEQG-API 92
+P A G+ ++ +L +++ R G AL AA GH +++LLE G I
Sbjct: 74 SPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDI 133
Query: 93 SSKTKVRGFYILRSGHEAVIEML-LEQGAPISSKTKVAAVLLENGASLTSTTKKGFTPLH 151
+ G+ A+IE + L +G + + +L+ENGA + G T +
Sbjct: 134 DFQNDF--------GYTALIEAVGLREGNQLYQD--IVKLLMENGADQSIKDNSGRTAMD 183
Query: 152 LTGKYGHIKVAKLLLQ 167
+ G+ +++K+L Q
Sbjct: 184 YANQKGYTEISKILAQ 199
Score = 32.3 bits (72), Expect = 2.1, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 40/92 (43%)
Query: 1289 KGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSA 1348
+G TPL+ + I L+DRGA N N L+ +A +L +
Sbjct: 38 EGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATP 97
Query: 1349 NVSCTTDQGFTPLHHSAQQGHSTIVALLLDRG 1380
+++ G L +A++GH V LLL+ G
Sbjct: 98 DLNKHNRYGGNALIPAAEKGHIDNVKLLLEDG 129
Score = 30.8 bits (68), Expect = 5.7, Method: Composition-based stats.
Identities = 36/131 (27%), Positives = 56/131 (42%), Gaps = 12/131 (9%)
Query: 115 LLEQGAPISSKTKVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDF 174
LLE +K KV +L + + +G TPL++ I++AK L+ + A ++
Sbjct: 9 LLEAANQRDTK-KVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINL 67
Query: 175 QGKAPVDDVTVDYLTALHVAAHCGHARVAKTLLDKKADPNARALN--GFTPLHIACKKNR 232
Q + D Y A G + +L K A P+ N G L A +K
Sbjct: 68 QNS--ISDSPYLY------AGAQGRTEILAYML-KHATPDLNKHNRYGGNALIPAAEKGH 118
Query: 233 IKVVELLLKHG 243
I V+LLL+ G
Sbjct: 119 IDNVKLLLEDG 129
>pdb|2XEN|A Chain A, Structural Determinants For Improved Thermal Stability Of
Designed Ankyrin Repeat Proteins With A Redesigned C-
Capping Module
Length = 91
Score = 59.7 bits (143), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 53/87 (60%)
Query: 1022 DLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAP 1081
DL L AA+ GQ++ +L+ NGA + + K G+TPLHL + GH+++ ++LL+ A
Sbjct: 1 DLGKKLLEAARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGAD 60
Query: 1082 VDFQGKNGVTPLHVASHYDHQNVALLL 1108
V+ Q K G T ++ ++++A +L
Sbjct: 61 VNAQDKFGKTAFDISIDNGNEDLAEIL 87
Score = 56.2 bits (134), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/84 (40%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 997 ASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKG 1056
A+R G D V +L+ +GA V++ KD YT LH+AA+EG E+ VLL+ GA + + K G
Sbjct: 9 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFG 68
Query: 1057 FTPLHLTGKYGHIKVAKLLLQKDA 1080
T ++ G+ +A+ +LQK A
Sbjct: 69 KTAFDISIDNGNEDLAE-ILQKAA 91
Score = 55.1 bits (131), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/79 (37%), Positives = 53/79 (67%), Gaps = 3/79 (3%)
Query: 40 AAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISSKTKV- 98
AA+ G+ + V +L++ GA+++ K +DG T LH AAR GH ++E+LL+ GA ++++ K
Sbjct: 9 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFG 68
Query: 99 -RGFYI-LRSGHEAVIEML 115
F I + +G+E + E+L
Sbjct: 69 KTAFDISIDNGNEDLAEIL 87
Score = 53.5 bits (127), Expect = 9e-07, Method: Composition-based stats.
Identities = 30/79 (37%), Positives = 44/79 (55%)
Query: 1142 SASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKG 1201
+A G D +L+ +GADV+ K+G TPLHL A+E + + E+LLK A V+ K G
Sbjct: 9 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFG 68
Query: 1202 FTPLHIACHYGQISMARLL 1220
T I+ G +A +L
Sbjct: 69 KTAFDISIDNGNEDLAEIL 87
Score = 51.6 bits (122), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 44/84 (52%)
Query: 1106 LLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAA 1165
LL + D L+ GA NA+ G+TPLHL+A EGH ++ +LL+ GADV+
Sbjct: 6 LLEAARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQD 65
Query: 1166 KNGLTPLHLCAQEDRVGVAELLLK 1189
K G T + +AE+L K
Sbjct: 66 KFGKTAFDISIDNGNEDLAEILQK 89
Score = 50.4 bits (119), Expect = 6e-06, Method: Composition-based stats.
Identities = 33/83 (39%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 1262 LHHSAQQGHSTIVALLLDRGASPNATNK-GFTPLHHSAQQGHSTIVALLLDRGASPNATN 1320
L +A+ G V +L+ GA NA +K G+TPLH +A++GH IV +LL GA NA +
Sbjct: 6 LLEAARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQD 65
Query: 1321 KTRGFTPLHIACHYGQISMARLL 1343
K G T I+ G +A +L
Sbjct: 66 KF-GKTAFDISIDNGNEDLAEIL 87
Score = 50.1 bits (118), Expect = 9e-06, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 44/81 (54%)
Query: 194 AAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVR 253
AA G + L+ AD NA+ +G+TPLH+A ++ +++VE+LLK GA + A +
Sbjct: 9 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFG 68
Query: 254 EPMLHIACKKNRIKVVELLLK 274
+ I+ + E+L K
Sbjct: 69 KTAFDISIDNGNEDLAEILQK 89
Score = 47.4 bits (111), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 34/58 (58%)
Query: 1331 ACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATNK 1388
A GQ R+L+ A+V+ G+TPLH +A++GH IV +LL GA NA +K
Sbjct: 9 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDK 66
Score = 46.2 bits (108), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Query: 131 VLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGK--APVDDVTVD 186
+L+ NGA + + K G+TPLHL + GH+++ ++LL+ A V+ Q K D+++D
Sbjct: 20 ILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTAFDISID 77
Score = 44.7 bits (104), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 39/59 (66%)
Query: 984 NLRVREQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVL 1042
N + ++ TPLH+A+R G+++IV +LL+ GA V++ K TA I+ G E++A +L
Sbjct: 29 NAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTAFDISIDNGNEDLAEIL 87
Score = 42.4 bits (98), Expect = 0.002, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Query: 1294 LHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCT 1353
L +A+ G V +L+ GA NA +K G+TPLH+A G + + +LL A+V+
Sbjct: 6 LLEAARAGQDDEVRILMANGADVNAKDKD-GYTPLHLAAREGHLEIVEVLLKAGADVNAQ 64
Query: 1354 TDQGFTPLHHSAQQGHSTIVALL 1376
G T S G+ + +L
Sbjct: 65 DKFGKTAFDISIDNGNEDLAEIL 87
Score = 40.0 bits (92), Expect = 0.009, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 1176 AQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNF 1233
Q+D V +L+ N A V+ K G+TPLH+A G + + +LL A+V F
Sbjct: 13 GQDDEV---RILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKF 67
Score = 39.7 bits (91), Expect = 0.011, Method: Composition-based stats.
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 13/91 (14%)
Query: 1064 GKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLE 1123
+ G ++L+ A V+ + K+G TPLH+A+ H ++I LL+
Sbjct: 10 ARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGH-------------LEIVEVLLK 56
Query: 1124 YGAKPNAESVAGFTPLHLSASEGHADMSAML 1154
GA NA+ G T +S G+ D++ +L
Sbjct: 57 AGADVNAQDKFGKTAFDISIDNGNEDLAEIL 87
Score = 39.7 bits (91), Expect = 0.013, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 1253 NTTDQ-GFTPLHHSAQQGHSTIVALLLDRGASPNATNK-GFTPLHHSAQQGHSTIVALL 1309
N D+ G+TPLH +A++GH IV +LL GA NA +K G T S G+ + +L
Sbjct: 29 NAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTAFDISIDNGNEDLAEIL 87
Score = 38.9 bits (89), Expect = 0.021, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 33/51 (64%)
Query: 35 TPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEML 85
TPLH+AA+ G +V +LL GA+++ + + G TA + +G+E + E+L
Sbjct: 37 TPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTAFDISIDNGNEDLAEIL 87
Score = 36.6 bits (83), Expect = 0.100, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 38/72 (52%)
Query: 236 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 295
V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A + + I+
Sbjct: 18 VRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTAFDISID 77
Query: 296 KNRIKVVELLLK 307
+ E+L K
Sbjct: 78 NGNEDLAEILQK 89
Score = 36.6 bits (83), Expect = 0.100, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 38/72 (52%)
Query: 269 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 328
V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A + + I+
Sbjct: 18 VRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTAFDISID 77
Query: 329 KNRIKVVELLLK 340
+ E+L K
Sbjct: 78 NGNEDLAEILQK 89
Score = 36.6 bits (83), Expect = 0.100, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 38/72 (52%)
Query: 302 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 361
V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A + + I+
Sbjct: 18 VRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTAFDISID 77
Query: 362 KNRIKVVELLLK 373
+ E+L K
Sbjct: 78 NGNEDLAEILQK 89
Score = 36.6 bits (83), Expect = 0.100, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 38/72 (52%)
Query: 335 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 394
V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A + + I+
Sbjct: 18 VRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTAFDISID 77
Query: 395 KNRIKVVELLLK 406
+ E+L K
Sbjct: 78 NGNEDLAEILQK 89
Score = 36.6 bits (83), Expect = 0.100, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 38/72 (52%)
Query: 368 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 427
V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A + + I+
Sbjct: 18 VRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTAFDISID 77
Query: 428 KNRIKVVELLLK 439
+ E+L K
Sbjct: 78 NGNEDLAEILQK 89
Score = 36.6 bits (83), Expect = 0.100, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 38/72 (52%)
Query: 401 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 460
V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A + + I+
Sbjct: 18 VRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTAFDISID 77
Query: 461 KNRIKVVELLLK 472
+ E+L K
Sbjct: 78 NGNEDLAEILQK 89
Score = 36.6 bits (83), Expect = 0.100, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 38/72 (52%)
Query: 434 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 493
V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A + + I+
Sbjct: 18 VRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTAFDISID 77
Query: 494 KNRIKVVELLLK 505
+ E+L K
Sbjct: 78 NGNEDLAEILQK 89
Score = 36.6 bits (83), Expect = 0.100, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 38/72 (52%)
Query: 467 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 526
V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A + + I+
Sbjct: 18 VRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTAFDISID 77
Query: 527 KNRIKVVELLLK 538
+ E+L K
Sbjct: 78 NGNEDLAEILQK 89
Score = 36.6 bits (83), Expect = 0.100, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 38/72 (52%)
Query: 500 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 559
V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A + + I+
Sbjct: 18 VRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTAFDISID 77
Query: 560 KNRIKVVELLLK 571
+ E+L K
Sbjct: 78 NGNEDLAEILQK 89
Score = 36.6 bits (83), Expect = 0.100, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 38/72 (52%)
Query: 533 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 592
V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A + + I+
Sbjct: 18 VRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTAFDISID 77
Query: 593 KNRIKVVELLLK 604
+ E+L K
Sbjct: 78 NGNEDLAEILQK 89
Score = 36.6 bits (83), Expect = 0.100, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 38/72 (52%)
Query: 566 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 625
V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A + + I+
Sbjct: 18 VRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTAFDISID 77
Query: 626 KNRIKVVELLLK 637
+ E+L K
Sbjct: 78 NGNEDLAEILQK 89
Score = 36.6 bits (83), Expect = 0.100, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 38/72 (52%)
Query: 599 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 658
V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A + + I+
Sbjct: 18 VRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTAFDISID 77
Query: 659 KNRIKVVELLLK 670
+ E+L K
Sbjct: 78 NGNEDLAEILQK 89
Score = 36.6 bits (83), Expect = 0.100, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 38/72 (52%)
Query: 632 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 691
V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A + + I+
Sbjct: 18 VRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTAFDISID 77
Query: 692 KNRIKVVELLLK 703
+ E+L K
Sbjct: 78 NGNEDLAEILQK 89
Score = 36.6 bits (83), Expect = 0.100, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 38/72 (52%)
Query: 665 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 724
V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A + + I+
Sbjct: 18 VRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTAFDISID 77
Query: 725 KNRIKVVELLLK 736
+ E+L K
Sbjct: 78 NGNEDLAEILQK 89
Score = 36.6 bits (83), Expect = 0.100, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 38/72 (52%)
Query: 698 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 757
V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A + + I+
Sbjct: 18 VRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTAFDISID 77
Query: 758 KNRIKVVELLLK 769
+ E+L K
Sbjct: 78 NGNEDLAEILQK 89
Score = 36.6 bits (83), Expect = 0.100, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 38/72 (52%)
Query: 731 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 790
V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A + + I+
Sbjct: 18 VRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTAFDISID 77
Query: 791 KNRIKVVELLLK 802
+ E+L K
Sbjct: 78 NGNEDLAEILQK 89
Score = 36.6 bits (83), Expect = 0.100, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 38/72 (52%)
Query: 764 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 823
V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A + + I+
Sbjct: 18 VRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTAFDISID 77
Query: 824 KNRIKVVELLLK 835
+ E+L K
Sbjct: 78 NGNEDLAEILQK 89
Score = 36.6 bits (83), Expect = 0.100, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 38/72 (52%)
Query: 797 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 856
V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A + + I+
Sbjct: 18 VRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTAFDISID 77
Query: 857 KNRIKVVELLLK 868
+ E+L K
Sbjct: 78 NGNEDLAEILQK 89
Score = 36.6 bits (83), Expect = 0.100, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 38/72 (52%)
Query: 830 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 889
V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A + + I+
Sbjct: 18 VRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTAFDISID 77
Query: 890 KNRIKVVELLLK 901
+ E+L K
Sbjct: 78 NGNEDLAEILQK 89
Score = 36.6 bits (83), Expect = 0.100, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 38/72 (52%)
Query: 863 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 922
V +L+ +GA + A + LH+A ++ +++VE+LLK GA + A + + I+
Sbjct: 18 VRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTAFDISID 77
Query: 923 KNRIKVVELLLK 934
+ E+L K
Sbjct: 78 NGNEDLAEILQK 89
Score = 34.3 bits (77), Expect = 0.57, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 39/73 (53%)
Query: 896 VELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASSHVVSCYSNVKVHVSLN 955
V +L+ +GA + A + LH+A ++ +++VE+LLK GA + + +S++
Sbjct: 18 VRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTAFDISID 77
Query: 956 KIQDVSSSILRLA 968
+ + IL+ A
Sbjct: 78 NGNEDLAEILQKA 90
Score = 32.7 bits (73), Expect = 1.6, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 30/64 (46%)
Query: 178 APVDDVTVDYLTALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVE 237
A V+ D T LH+AA GH + + LL AD NA+ G T I+ + E
Sbjct: 26 ADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTAFDISIDNGNEDLAE 85
Query: 238 LLLK 241
+L K
Sbjct: 86 ILQK 89
>pdb|1IKN|D Chain D, IkappabalphaNF-Kappab Complex
Length = 236
Score = 58.2 bits (139), Expect = 3e-08, Method: Composition-based stats.
Identities = 47/139 (33%), Positives = 66/139 (47%), Gaps = 15/139 (10%)
Query: 189 TALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLK-----HG 243
T LH+A +A+ LL DP R G TPLH+AC++ + V +L + H
Sbjct: 47 TPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHL 106
Query: 244 ASI-EATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREP-----MLHIACKKN 297
SI +AT LH+A + +VELL+ GA + A +EP LH+A
Sbjct: 107 HSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNA----QEPCNGRTALHLAVDLQ 162
Query: 298 RIKVVELLLKHGASIEATT 316
+V LLLK GA + T
Sbjct: 163 NPDLVSLLLKCGADVNRVT 181
Score = 55.8 bits (133), Expect = 2e-07, Method: Composition-based stats.
Identities = 46/156 (29%), Positives = 69/156 (44%), Gaps = 18/156 (11%)
Query: 1025 TALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQK------ 1078
T LH+A Q E+A LL G +G TPLHL + G + +L Q
Sbjct: 47 TPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHL 106
Query: 1079 DAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTP 1138
+ + NG T LH+AS + + + LL+ GA ++ E G T
Sbjct: 107 HSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNA------------QEPCNGRTA 154
Query: 1139 LHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHL 1174
LHL+ + D+ ++LL+ GADV+ G +P L
Sbjct: 155 LHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQL 190
Score = 55.8 bits (133), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/111 (36%), Positives = 56/111 (50%), Gaps = 7/111 (6%)
Query: 1257 QGFTPLHHSAQQGHSTIVALLLDRGASPN------ATN-KGFTPLHHSAQQGHSTIVALL 1309
+G TPLH + +QG V +L +P+ ATN G T LH ++ G+ IV LL
Sbjct: 77 RGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELL 136
Query: 1310 LDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTP 1360
+ GA NA G T LH+A + LLL A+V+ T QG++P
Sbjct: 137 VSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSP 187
Score = 52.4 bits (124), Expect = 2e-06, Method: Composition-based stats.
Identities = 51/192 (26%), Positives = 89/192 (46%), Gaps = 10/192 (5%)
Query: 877 TEVREPMLHIAC----KKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 932
TE + LH+A K ++V+ + A + +++ LH+A N+ ++ E L
Sbjct: 5 TEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEAL 64
Query: 933 LKHGASSHVVSCYSNVKVHVSLNKIQDVSSSILRLATCDVLPQCETRLNFSNLRVREQQT 992
L G + N +H++ Q +S+ L P + L +N T
Sbjct: 65 LGAGCDPELRDFRGNTPLHLACE--QGCLASVGVLTQSCTTPHLHSILKATNY---NGHT 119
Query: 993 PLHIASRLGNVDIVMLLLQHGAAVDSTTK-DLYTALHIAAKEGQEEVAAVLLENGASLTS 1051
LH+AS G + IV LL+ GA V++ + TALH+A ++ ++LL+ GA +
Sbjct: 120 CLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNR 179
Query: 1052 TTKKGFTPLHLT 1063
T +G++P LT
Sbjct: 180 VTYQGYSPYQLT 191
Score = 51.6 bits (122), Expect = 3e-06, Method: Composition-based stats.
Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 8/151 (5%)
Query: 1058 TPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDI 1117
TPLHL ++A+ LL + + G TPLH+A +L + + +
Sbjct: 47 TPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHL 106
Query: 1118 ATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADV-SHAAKNGLTPLHLCA 1176
+ L A + G T LHL++ G+ + +L+ GADV + NG T LHL
Sbjct: 107 HSIL-------KATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAV 159
Query: 1177 QEDRVGVAELLLKNNAQVDTPTKKGFTPLHI 1207
+ LLLK A V+ T +G++P +
Sbjct: 160 DLQNPDLVSLLLKCGADVNRVTYQGYSPYQL 190
Score = 50.8 bits (120), Expect = 5e-06, Method: Composition-based stats.
Identities = 47/163 (28%), Positives = 70/163 (42%), Gaps = 21/163 (12%)
Query: 1170 TPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTV 1229
TPLHL ++ +AE LL + +G TPLH+AC G ++ +L + + T
Sbjct: 47 TPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVL---TQSCTT 103
Query: 1230 PKNFPSRXXXXXXXXXXXXXXYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATN- 1288
P T G T LH ++ G+ IV LL+ GA NA
Sbjct: 104 PH---------------LHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEP 148
Query: 1289 -KGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHI 1330
G T LH + + +V+LLL GA N +G++P +
Sbjct: 149 CNGRTALHLAVDLQNPDLVSLLLKCGADVNRVT-YQGYSPYQL 190
Score = 50.4 bits (119), Expect = 7e-06, Method: Composition-based stats.
Identities = 43/133 (32%), Positives = 62/133 (46%), Gaps = 9/133 (6%)
Query: 1260 TPLHHSAQQGHSTIVALLLDRGASPNATN-KGFTPLHHSAQQGHSTIVALLLDRGASPN- 1317
TPLH + I LL G P + +G TPLH + +QG V +L +P+
Sbjct: 47 TPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHL 106
Query: 1318 -----ATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTD-QGFTPLHHSAQQGHST 1371
ATN G T LH+A +G + + LL+ A+V+ G T LH + +
Sbjct: 107 HSILKATNYN-GHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPD 165
Query: 1372 IVALLLDRGASPN 1384
+V+LLL GA N
Sbjct: 166 LVSLLLKCGADVN 178
Score = 45.4 bits (106), Expect = 2e-04, Method: Composition-based stats.
Identities = 46/155 (29%), Positives = 64/155 (41%), Gaps = 20/155 (12%)
Query: 1080 APVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPL 1139
A ++FQ TPLH+A + +IA LL G P G TPL
Sbjct: 36 AFLNFQNNLQQTPLHLAVITNQP-------------EIAEALLGAGCDPELRDFRGNTPL 82
Query: 1140 HLSASEGHADMSAMLLE-----HGADVSHAAK-NGLTPLHLCAQEDRVGVAELLLKNNAQ 1193
HL+ +G +L + H + A NG T LHL + +G+ ELL+ A
Sbjct: 83 HLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGAD 142
Query: 1194 VDTPTK-KGFTPLHIACHYGQISMARLLLDQSANV 1227
V+ G T LH+A + LLL A+V
Sbjct: 143 VNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADV 177
Score = 44.7 bits (104), Expect = 3e-04, Method: Composition-based stats.
Identities = 51/181 (28%), Positives = 81/181 (44%), Gaps = 19/181 (10%)
Query: 316 TEVREPMLHIAC----KKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 371
TE + LH+A K ++V+ + A + +++ LH+A N+ ++ E L
Sbjct: 5 TEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEAL 64
Query: 372 LKHGASIEATTEVREPMLHIACKKNRIKVVELLLK-----HGASI-EATTEVREPMLHIA 425
L G E LH+AC++ + V +L + H SI +AT LH+A
Sbjct: 65 LGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLA 124
Query: 426 CKKNRIKVVELLLKHGASIEATTEVREP-----MLHIACKKNRIKVVELLLKHGASIEAT 480
+ +VELL+ GA + A +EP LH+A +V LLLK GA +
Sbjct: 125 SIHGYLGIVELLVSLGADVNA----QEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRV 180
Query: 481 T 481
T
Sbjct: 181 T 181
Score = 44.7 bits (104), Expect = 3e-04, Method: Composition-based stats.
Identities = 51/181 (28%), Positives = 81/181 (44%), Gaps = 19/181 (10%)
Query: 415 TEVREPMLHIAC----KKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 470
TE + LH+A K ++V+ + A + +++ LH+A N+ ++ E L
Sbjct: 5 TEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEAL 64
Query: 471 LKHGASIEATTEVREPMLHIACKKNRIKVVELLLK-----HGASI-EATTEVREPMLHIA 524
L G E LH+AC++ + V +L + H SI +AT LH+A
Sbjct: 65 LGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLA 124
Query: 525 CKKNRIKVVELLLKHGASIEATTEVREP-----MLHIACKKNRIKVVELLLKHGASIEAT 579
+ +VELL+ GA + A +EP LH+A +V LLLK GA +
Sbjct: 125 SIHGYLGIVELLVSLGADVNA----QEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRV 180
Query: 580 T 580
T
Sbjct: 181 T 181
Score = 44.7 bits (104), Expect = 3e-04, Method: Composition-based stats.
Identities = 51/181 (28%), Positives = 81/181 (44%), Gaps = 19/181 (10%)
Query: 514 TEVREPMLHIAC----KKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 569
TE + LH+A K ++V+ + A + +++ LH+A N+ ++ E L
Sbjct: 5 TEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEAL 64
Query: 570 LKHGASIEATTEVREPMLHIACKKNRIKVVELLLK-----HGASI-EATTEVREPMLHIA 623
L G E LH+AC++ + V +L + H SI +AT LH+A
Sbjct: 65 LGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLA 124
Query: 624 CKKNRIKVVELLLKHGASIEATTEVREP-----MLHIACKKNRIKVVELLLKHGASIEAT 678
+ +VELL+ GA + A +EP LH+A +V LLLK GA +
Sbjct: 125 SIHGYLGIVELLVSLGADVNA----QEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRV 180
Query: 679 T 679
T
Sbjct: 181 T 181
Score = 44.7 bits (104), Expect = 3e-04, Method: Composition-based stats.
Identities = 51/181 (28%), Positives = 81/181 (44%), Gaps = 19/181 (10%)
Query: 613 TEVREPMLHIAC----KKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 668
TE + LH+A K ++V+ + A + +++ LH+A N+ ++ E L
Sbjct: 5 TEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEAL 64
Query: 669 LKHGASIEATTEVREPMLHIACKKNRIKVVELLLK-----HGASI-EATTEVREPMLHIA 722
L G E LH+AC++ + V +L + H SI +AT LH+A
Sbjct: 65 LGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLA 124
Query: 723 CKKNRIKVVELLLKHGASIEATTEVREP-----MLHIACKKNRIKVVELLLKHGASIEAT 777
+ +VELL+ GA + A +EP LH+A +V LLLK GA +
Sbjct: 125 SIHGYLGIVELLVSLGADVNA----QEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRV 180
Query: 778 T 778
T
Sbjct: 181 T 181
Score = 44.7 bits (104), Expect = 3e-04, Method: Composition-based stats.
Identities = 51/181 (28%), Positives = 81/181 (44%), Gaps = 19/181 (10%)
Query: 712 TEVREPMLHIAC----KKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 767
TE + LH+A K ++V+ + A + +++ LH+A N+ ++ E L
Sbjct: 5 TEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEAL 64
Query: 768 LKHGASIEATTEVREPMLHIACKKNRIKVVELLLK-----HGASI-EATTEVREPMLHIA 821
L G E LH+AC++ + V +L + H SI +AT LH+A
Sbjct: 65 LGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLA 124
Query: 822 CKKNRIKVVELLLKHGASIEATTEVREP-----MLHIACKKNRIKVVELLLKHGASIEAT 876
+ +VELL+ GA + A +EP LH+A +V LLLK GA +
Sbjct: 125 SIHGYLGIVELLVSLGADVNA----QEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRV 180
Query: 877 T 877
T
Sbjct: 181 T 181
Score = 43.9 bits (102), Expect = 6e-04, Method: Composition-based stats.
Identities = 39/132 (29%), Positives = 61/132 (46%), Gaps = 3/132 (2%)
Query: 120 APISSKTKVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKAP 179
A I+++ ++A LL G +G TPLHL + G + +L Q +
Sbjct: 52 AVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLH--SI 109
Query: 180 VDDVTVDYLTALHVAAHCGHARVAKTLLDKKADPNAR-ALNGFTPLHIACKKNRIKVVEL 238
+ + T LH+A+ G+ + + L+ AD NA+ NG T LH+A +V L
Sbjct: 110 LKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSL 169
Query: 239 LLKHGASIEATT 250
LLK GA + T
Sbjct: 170 LLKCGADVNRVT 181
Score = 43.5 bits (101), Expect = 7e-04, Method: Composition-based stats.
Identities = 43/142 (30%), Positives = 66/142 (46%), Gaps = 15/142 (10%)
Query: 252 VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK---- 307
+++ LH+A N+ ++ E LL G E LH+AC++ + V +L +
Sbjct: 44 LQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTT 103
Query: 308 -HGASI-EATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREP-----MLHIAC 360
H SI +AT LH+A + +VELL+ GA + A +EP LH+A
Sbjct: 104 PHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNA----QEPCNGRTALHLAV 159
Query: 361 KKNRIKVVELLLKHGASIEATT 382
+V LLLK GA + T
Sbjct: 160 DLQNPDLVSLLLKCGADVNRVT 181
Score = 41.2 bits (95), Expect = 0.004, Method: Composition-based stats.
Identities = 48/200 (24%), Positives = 84/200 (42%), Gaps = 34/200 (17%)
Query: 1103 NVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVS 1162
++A++ EK +M++ + A N ++ TPLHL+ +++ LL G D
Sbjct: 13 HLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPE 72
Query: 1163 HAAKNGLTPLHLCAQEDRVGVAELLLKN------NAQVDTPTKKGFTPLHIACHYGQISM 1216
G TPLHL ++ + +L ++ ++ + G T LH+A +G + +
Sbjct: 73 LRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGI 132
Query: 1217 ARLLLDQSANVTV--PKNFPSRXXXXXXXXXXXXXXYTNTTDQGFTPLHHSAQQGHSTIV 1274
LL+ A+V P N G T LH + + +V
Sbjct: 133 VELLVSLGADVNAQEPCN-------------------------GRTALHLAVDLQNPDLV 167
Query: 1275 ALLLDRGASPN-ATNKGFTP 1293
+LLL GA N T +G++P
Sbjct: 168 SLLLKCGADVNRVTYQGYSP 187
Score = 38.9 bits (89), Expect = 0.020, Method: Composition-based stats.
Identities = 41/155 (26%), Positives = 68/155 (43%), Gaps = 32/155 (20%)
Query: 29 HFQHNI--TPLHVAAKWGKANMVTLLLSRGANIDNKTRD--GLTALHCAARSGHEAVIEM 84
+FQ+N+ TPLH+A + + LL GA D + RD G T LH A G A + +
Sbjct: 39 NFQNNLQQTPLHLAVITNQPEIAEALL--GAGCDPELRDFRGNTPLHLACEQGCLASVGV 96
Query: 85 LLEQGA-----PISSKTKVRGFYILR----SGHEAVIEMLLEQGAPISSKT--------- 126
L + I T G L G+ ++E+L+ GA ++++
Sbjct: 97 LTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALH 156
Query: 127 --------KVAAVLLENGASLTSTTKKGFTPLHLT 153
+ ++LL+ GA + T +G++P LT
Sbjct: 157 LAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLT 191
Score = 38.9 bits (89), Expect = 0.023, Method: Composition-based stats.
Identities = 61/249 (24%), Positives = 99/249 (39%), Gaps = 57/249 (22%)
Query: 811 TEVREPMLHIAC----KKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 866
TE + LH+A K ++V+ + A + +++ LH+A N+ ++ E L
Sbjct: 5 TEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEAL 64
Query: 867 LKHGASIEATTEVREPMLHIACKKNRIKVVELLLK-----HGASI-EATTEVREPMLHIA 920
L G E LH+AC++ + V +L + H SI +AT LH+A
Sbjct: 65 LGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLA 124
Query: 921 CKKNRIKVVELLLKHGASSHVVSCYSNVKVHVSLNKIQDVSSSILRLATCDVLPQCETRL 980
+ +VELL+ GA DV++ C R
Sbjct: 125 SIHGYLGIVELLVSLGA---------------------DVNAQ----------EPCNGR- 152
Query: 981 NFSNLRVREQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIA----AKEGQE 1036
T LH+A L N D+V LLL+ GA V+ T Y+ + + Q+
Sbjct: 153 -----------TALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQ 201
Query: 1037 EVAAVLLEN 1045
++ + LEN
Sbjct: 202 QLGQLTLEN 210
>pdb|1OY3|D Chain D, Crystal Structure Of An IkbbetaNF-Kb P65 Homodimer Complex
Length = 282
Score = 57.8 bits (138), Expect = 4e-08, Method: Composition-based stats.
Identities = 71/244 (29%), Positives = 91/244 (37%), Gaps = 38/244 (15%)
Query: 1020 TKDLYTALHIAAKEGQEEVAAVLLENGAS---LTSTTKKGFTPLHLTGKYGHIKVAKLLL 1076
T+D TALH+A E LL A L G T LHL G + L
Sbjct: 6 TEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLY 65
Query: 1077 QKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGAS--MDIATTLLEYG--------- 1125
A V + G T LH+A A +LL+ S D + T L
Sbjct: 66 AAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSH 125
Query: 1126 ------AKPN-----------------AESVAGFTPLHLSASEGHADMSAMLLEHGADVS 1162
++PN AE+ G TPLH++ A+M +L + GAD++
Sbjct: 126 APAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLN 185
Query: 1163 HAAKN-GLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLL 1221
G TPLHL + V ELLLK A G TPL A +ARLL
Sbjct: 186 KPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLR 245
Query: 1222 DQSA 1225
A
Sbjct: 246 AHGA 249
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 65/222 (29%), Positives = 87/222 (39%), Gaps = 31/222 (13%)
Query: 35 TPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISS 94
T LH+AA G+A+ V L + GA + R G TALH A R +LL Q P S
Sbjct: 47 TALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLL-QPRP-SH 104
Query: 95 KTKVRGFYILRSGHEAVIEMLLEQGAPISSKTKVAAVLLENGAS------------LTST 142
Y+ +S + P +S A N + L +
Sbjct: 105 PRDASDTYLTQS----------QDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAE 154
Query: 143 TKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKAPVDDVTVDYLTALHVAAHCGHARV 202
G TPLH+ + ++ +LL +DA D P T LH+A A V
Sbjct: 155 NYDGHTPLHVAVIHKDAEMVRLL--RDAGADLNKPEPTCG-----RTPLHLAVEAQAASV 207
Query: 203 AKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGA 244
+ LL ADP AR G TPL A + + LL HGA
Sbjct: 208 LELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGA 249
Score = 50.4 bits (119), Expect = 6e-06, Method: Composition-based stats.
Identities = 67/253 (26%), Positives = 90/253 (35%), Gaps = 18/253 (7%)
Query: 1135 GFTPLHLSASEGHADMSAMLLEHGADVSHAAKN-----GLTPLHLCAQEDRVGVAELLLK 1189
G T LHL+ H LL G H + G T LHL A E L
Sbjct: 9 GDTALHLAVIHQHEPFLDFLL--GFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYA 66
Query: 1190 NNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRXXXXXXXXXXXXX 1249
A V + G T LH+AC + A +LL + P++
Sbjct: 67 AGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRP--SHPRDASDTYLTQSQDCTPDTS 124
Query: 1250 XYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATN-KGFTPLHHSAQQGHSTIVAL 1308
D P + + + L A N G TPLH + + +V L
Sbjct: 125 HAPAAVDSQPNPENEEEPRDEDWRLQL--------EAENYDGHTPLHVAVIHKDAEMVRL 176
Query: 1309 LLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQG 1368
L D GA N T G TPLH+A S+ LLL A+ + G TPL + +
Sbjct: 177 LRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRP 236
Query: 1369 HSTIVALLLDRGA 1381
+ + LL GA
Sbjct: 237 NPILARLLRAHGA 249
Score = 47.4 bits (111), Expect = 6e-05, Method: Composition-based stats.
Identities = 70/280 (25%), Positives = 102/280 (36%), Gaps = 54/280 (19%)
Query: 1053 TKKGFTPLHLTGKYGHIKVAKLLLQKDAP---VDFQGKNGVTPLHVASHYDHQNVALLLL 1109
T+ G T LHL + H LL A +D Q G T LH+A+ + L
Sbjct: 6 TEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLY 65
Query: 1110 EKGASMDIATTLLEYGAKPNAESVAGFTPLHLSAS-EGHADMSAMLLEHGADVSHAAKNG 1168
GA + +A E G G T LHL+ H +L + A+
Sbjct: 66 AAGAGVLVA----ERG---------GHTALHLACRVRAHTCACVLLQPRPSHPRDASDTY 112
Query: 1169 LTPLHLCAQEDRVGVAELLLKNNA-------------QVDTPTKKGFTPLHIACHYGQIS 1215
LT C + A + + N Q++ G TPLH+A +
Sbjct: 113 LTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAE 172
Query: 1216 MARLLLDQSANVTVPKNFPSRXXXXXXXXXXXXXXYTNTTDQGFTPLHHSAQQGHSTIVA 1275
M RLL D A++ P+ R TPLH + + ++++
Sbjct: 173 MVRLLRDAGADLNKPEPTCGR-----------------------TPLHLAVEAQAASVLE 209
Query: 1276 LLLDRGASPNA-TNKGFTPLHHSAQQGHSTIVALLLDRGA 1314
LLL GA P A G TPL + + + + LL GA
Sbjct: 210 LLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGA 249
Score = 47.0 bits (110), Expect = 8e-05, Method: Composition-based stats.
Identities = 77/272 (28%), Positives = 105/272 (38%), Gaps = 52/272 (19%)
Query: 63 TRDGLTALHCAARSGHEAVIEMLLEQGAPISSKTKVRGFYILRSGHEAV-IEMLLEQG-- 119
T DG TALH A HE ++ LL GF +GHE + ++ L Q
Sbjct: 6 TEDGDTALHLAVIHQHEPFLDFLL-------------GF---SAGHEYLDLQNDLGQTAL 49
Query: 120 --APISSKTKVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGK 177
A I + L GA + + G T LHL + A +LLQ
Sbjct: 50 HLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRP------- 102
Query: 178 APVDDVTVDYLT-ALHVAAHCGHARVAKTLLDKKADP---------------NARALNGF 221
+ D + YLT + HA A +D + +P A +G
Sbjct: 103 SHPRDASDTYLTQSQDCTPDTSHAPAA---VDSQPNPENEEEPRDEDWRLQLEAENYDGH 159
Query: 222 TPLHIACKKNRIKVVELLLKHGASIEATTEV--REPMLHIACKKNRIKVVELLLKHGASI 279
TPLH+A ++V LL GA + R P LH+A + V+ELLLK GA
Sbjct: 160 TPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTP-LHLAVEAQAASVLELLLKAGADP 218
Query: 280 EATTE-VREPMLHIACKKNRIKVVELLLKHGA 310
A R P+ + N I + LL HGA
Sbjct: 219 TARMYGGRTPLGSALLRPNPI-LARLLRAHGA 249
Score = 44.3 bits (103), Expect = 4e-04, Method: Composition-based stats.
Identities = 54/216 (25%), Positives = 82/216 (37%), Gaps = 35/216 (16%)
Query: 991 QTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLE------ 1044
QT LH+A+ LG V L GA V + +TALH+A + A VLL+
Sbjct: 46 QTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHP 105
Query: 1045 NGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVD--------FQGKNGVTPLHVA 1096
AS T T+ + + ++ P D + +G TPLHVA
Sbjct: 106 RDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVA 165
Query: 1097 SHYDHQNVALLLLEKGASMD---------------------IATTLLEYGAKPNAESVAG 1135
+ + LL + GA ++ + LL+ GA P A G
Sbjct: 166 VIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGG 225
Query: 1136 FTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTP 1171
TPL + + ++ +L HGA + L+P
Sbjct: 226 RTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSP 261
Score = 43.9 bits (102), Expect = 7e-04, Method: Composition-based stats.
Identities = 58/244 (23%), Positives = 88/244 (36%), Gaps = 48/244 (19%)
Query: 1163 HAAKNGLTPLHLCAQEDRVGVAELLLKNNA---QVDTPTKKGFTPLHIACHYGQISMARL 1219
+ ++G T LHL + LL +A +D G T LH+A G+ S
Sbjct: 4 YVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEK 63
Query: 1220 LLDQSANVTVPKNFPSRXXXXXXXXXXXXXXYTNTTDQGFTPLHHSAQ-QGHSTIVALLL 1278
L A V V + G T LH + + + H+ LL
Sbjct: 64 LYAAGAGVLVAER------------------------GGHTALHLACRVRAHTCACVLLQ 99
Query: 1279 DRGASPNATNKGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTR--------------- 1323
R + P + + S A + + PN N+
Sbjct: 100 PRPSHPRDASDTYLTQSQDCTPDTSHAPAAV---DSQPNPENEEEPRDEDWRLQLEAENY 156
Query: 1324 -GFTPLHIACHYGQISMARLLLDQSANVSCTTDQ-GFTPLHHSAQQGHSTIVALLLDRGA 1381
G TPLH+A + M RLL D A+++ G TPLH + + ++++ LLL GA
Sbjct: 157 DGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGA 216
Query: 1382 SPNA 1385
P A
Sbjct: 217 DPTA 220
Score = 32.7 bits (73), Expect = 1.4, Method: Composition-based stats.
Identities = 67/252 (26%), Positives = 94/252 (37%), Gaps = 26/252 (10%)
Query: 143 TKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKAPVDDVTVDY-LTALHVAAHCGHAR 201
T+ G T LHL + H LL A ++ D+ D TALH+AA G A
Sbjct: 6 TEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYL------DLQNDLGQTALHLAAILGEAS 59
Query: 202 VAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKH-------------GASIEA 248
+ L A G T LH+AC+ +LL+ S +
Sbjct: 60 TVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDC 119
Query: 249 TTEVREPMLHIACKKNRIKVVELLLKH-GASIEATTEVREPMLHIACKKNRIKVVELLLK 307
T + + + N E + +EA LH+A ++V LL
Sbjct: 120 TPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRD 179
Query: 308 HGASIEATTEV--REPMLHIACKKNRIKVVELLLKHGASIEATTE-VREPMLHIACKKNR 364
GA + R P LH+A + V+ELLLK GA A R P+ + N
Sbjct: 180 AGADLNKPEPTCGRTP-LHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNP 238
Query: 365 IKVVELLLKHGA 376
I + LL HGA
Sbjct: 239 I-LARLLRAHGA 249
Score = 32.0 bits (71), Expect = 2.4, Method: Composition-based stats.
Identities = 66/247 (26%), Positives = 89/247 (36%), Gaps = 22/247 (8%)
Query: 183 VTVDYLTALHVAAHCGHARVAKTLLDKKADPNARALN---GFTPLHIACKKNRIKVVELL 239
VT D TALH+A H LL A L G T LH+A VE L
Sbjct: 5 VTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKL 64
Query: 240 LKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH-------------GASIEATTEVR 286
GA + LH+AC+ +LL+ S + T +
Sbjct: 65 YAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTS 124
Query: 287 EPMLHIACKKNRIKVVELLLKH-GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 345
+ + N E + +EA LH+A ++V LL GA +
Sbjct: 125 HAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADL 184
Query: 346 EATTEV--REPMLHIACKKNRIKVVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVE 402
R P LH+A + V+ELLLK GA A R P+ + N I +
Sbjct: 185 NKPEPTCGRTP-LHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPI-LAR 242
Query: 403 LLLKHGA 409
LL HGA
Sbjct: 243 LLRAHGA 249
Score = 31.2 bits (69), Expect = 4.3, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 41/90 (45%), Gaps = 5/90 (5%)
Query: 356 LHIACKKNRIKVVELLLKHGASIEATTEV--REPMLHIACKKNRIKVVELLLKHGASIEA 413
LH+A ++V LL GA + R P LH+A + V+ELLLK GA A
Sbjct: 162 LHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTP-LHLAVEAQAASVLELLLKAGADPTA 220
Query: 414 TTE-VREPMLHIACKKNRIKVVELLLKHGA 442
R P+ + N I + LL HGA
Sbjct: 221 RMYGGRTPLGSALLRPNPI-LARLLRAHGA 249
Score = 31.2 bits (69), Expect = 4.3, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 41/90 (45%), Gaps = 5/90 (5%)
Query: 422 LHIACKKNRIKVVELLLKHGASIEATTEV--REPMLHIACKKNRIKVVELLLKHGASIEA 479
LH+A ++V LL GA + R P LH+A + V+ELLLK GA A
Sbjct: 162 LHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTP-LHLAVEAQAASVLELLLKAGADPTA 220
Query: 480 TTE-VREPMLHIACKKNRIKVVELLLKHGA 508
R P+ + N I + LL HGA
Sbjct: 221 RMYGGRTPLGSALLRPNPI-LARLLRAHGA 249
Score = 31.2 bits (69), Expect = 4.3, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 41/90 (45%), Gaps = 5/90 (5%)
Query: 488 LHIACKKNRIKVVELLLKHGASIEATTEV--REPMLHIACKKNRIKVVELLLKHGASIEA 545
LH+A ++V LL GA + R P LH+A + V+ELLLK GA A
Sbjct: 162 LHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTP-LHLAVEAQAASVLELLLKAGADPTA 220
Query: 546 TTE-VREPMLHIACKKNRIKVVELLLKHGA 574
R P+ + N I + LL HGA
Sbjct: 221 RMYGGRTPLGSALLRPNPI-LARLLRAHGA 249
Score = 31.2 bits (69), Expect = 4.3, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 41/90 (45%), Gaps = 5/90 (5%)
Query: 554 LHIACKKNRIKVVELLLKHGASIEATTEV--REPMLHIACKKNRIKVVELLLKHGASIEA 611
LH+A ++V LL GA + R P LH+A + V+ELLLK GA A
Sbjct: 162 LHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTP-LHLAVEAQAASVLELLLKAGADPTA 220
Query: 612 TTE-VREPMLHIACKKNRIKVVELLLKHGA 640
R P+ + N I + LL HGA
Sbjct: 221 RMYGGRTPLGSALLRPNPI-LARLLRAHGA 249
Score = 31.2 bits (69), Expect = 4.3, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 41/90 (45%), Gaps = 5/90 (5%)
Query: 620 LHIACKKNRIKVVELLLKHGASIEATTEV--REPMLHIACKKNRIKVVELLLKHGASIEA 677
LH+A ++V LL GA + R P LH+A + V+ELLLK GA A
Sbjct: 162 LHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTP-LHLAVEAQAASVLELLLKAGADPTA 220
Query: 678 TTE-VREPMLHIACKKNRIKVVELLLKHGA 706
R P+ + N I + LL HGA
Sbjct: 221 RMYGGRTPLGSALLRPNPI-LARLLRAHGA 249
Score = 31.2 bits (69), Expect = 4.3, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 41/90 (45%), Gaps = 5/90 (5%)
Query: 686 LHIACKKNRIKVVELLLKHGASIEATTEV--REPMLHIACKKNRIKVVELLLKHGASIEA 743
LH+A ++V LL GA + R P LH+A + V+ELLLK GA A
Sbjct: 162 LHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTP-LHLAVEAQAASVLELLLKAGADPTA 220
Query: 744 TTE-VREPMLHIACKKNRIKVVELLLKHGA 772
R P+ + N I + LL HGA
Sbjct: 221 RMYGGRTPLGSALLRPNPI-LARLLRAHGA 249
Score = 31.2 bits (69), Expect = 4.3, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 41/90 (45%), Gaps = 5/90 (5%)
Query: 752 LHIACKKNRIKVVELLLKHGASIEATTEV--REPMLHIACKKNRIKVVELLLKHGASIEA 809
LH+A ++V LL GA + R P LH+A + V+ELLLK GA A
Sbjct: 162 LHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTP-LHLAVEAQAASVLELLLKAGADPTA 220
Query: 810 TTE-VREPMLHIACKKNRIKVVELLLKHGA 838
R P+ + N I + LL HGA
Sbjct: 221 RMYGGRTPLGSALLRPNPI-LARLLRAHGA 249
Score = 31.2 bits (69), Expect = 4.3, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 41/90 (45%), Gaps = 5/90 (5%)
Query: 818 LHIACKKNRIKVVELLLKHGASIEATTEV--REPMLHIACKKNRIKVVELLLKHGASIEA 875
LH+A ++V LL GA + R P LH+A + V+ELLLK GA A
Sbjct: 162 LHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTP-LHLAVEAQAASVLELLLKAGADPTA 220
Query: 876 TTE-VREPMLHIACKKNRIKVVELLLKHGA 904
R P+ + N I + LL HGA
Sbjct: 221 RMYGGRTPLGSALLRPNPI-LARLLRAHGA 249
Score = 30.8 bits (68), Expect = 5.3, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 29/57 (50%)
Query: 35 TPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAP 91
TPLH+A + A+++ LLL GA+ + G T L A + + +L GAP
Sbjct: 194 TPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAP 250
>pdb|1K3Z|D Chain D, X-Ray Crystal Structure Of The IkbbNF-Kb P65 Homodimer
Complex
Length = 282
Score = 57.8 bits (138), Expect = 4e-08, Method: Composition-based stats.
Identities = 71/244 (29%), Positives = 91/244 (37%), Gaps = 38/244 (15%)
Query: 1020 TKDLYTALHIAAKEGQEEVAAVLLENGAS---LTSTTKKGFTPLHLTGKYGHIKVAKLLL 1076
T+D TALH+A E LL A L G T LHL G + L
Sbjct: 6 TEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLY 65
Query: 1077 QKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGAS--MDIATTLLEYG--------- 1125
A V + G T LH+A A +LL+ S D + T L
Sbjct: 66 AAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSH 125
Query: 1126 ------AKPN-----------------AESVAGFTPLHLSASEGHADMSAMLLEHGADVS 1162
++PN AE+ G TPLH++ A+M +L + GAD++
Sbjct: 126 APAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLN 185
Query: 1163 HAAKN-GLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLL 1221
G TPLHL + V ELLLK A G TPL A +ARLL
Sbjct: 186 KPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLR 245
Query: 1222 DQSA 1225
A
Sbjct: 246 AHGA 249
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 65/222 (29%), Positives = 87/222 (39%), Gaps = 31/222 (13%)
Query: 35 TPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISS 94
T LH+AA G+A+ V L + GA + R G TALH A R +LL Q P S
Sbjct: 47 TALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLL-QPRP-SH 104
Query: 95 KTKVRGFYILRSGHEAVIEMLLEQGAPISSKTKVAAVLLENGAS------------LTST 142
Y+ +S + P +S A N + L +
Sbjct: 105 PRDASDTYLTQS----------QDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAE 154
Query: 143 TKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKAPVDDVTVDYLTALHVAAHCGHARV 202
G TPLH+ + ++ +LL +DA D P T LH+A A V
Sbjct: 155 NYDGHTPLHVAVIHKDAEMVRLL--RDAGADLNKPEPTCG-----RTPLHLAVEAQAASV 207
Query: 203 AKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGA 244
+ LL ADP AR G TPL A + + LL HGA
Sbjct: 208 LELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGA 249
Score = 50.4 bits (119), Expect = 6e-06, Method: Composition-based stats.
Identities = 67/253 (26%), Positives = 90/253 (35%), Gaps = 18/253 (7%)
Query: 1135 GFTPLHLSASEGHADMSAMLLEHGADVSHAAKN-----GLTPLHLCAQEDRVGVAELLLK 1189
G T LHL+ H LL G H + G T LHL A E L
Sbjct: 9 GDTALHLAVIHQHEPFLDFLL--GFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYA 66
Query: 1190 NNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRXXXXXXXXXXXXX 1249
A V + G T LH+AC + A +LL + P++
Sbjct: 67 AGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRP--SHPRDASDTYLTQSQDCTPDTS 124
Query: 1250 XYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATN-KGFTPLHHSAQQGHSTIVAL 1308
D P + + + L A N G TPLH + + +V L
Sbjct: 125 HAPAAVDSQPNPENEEEPRDEDWRLQL--------EAENYDGHTPLHVAVIHKDAEMVRL 176
Query: 1309 LLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQG 1368
L D GA N T G TPLH+A S+ LLL A+ + G TPL + +
Sbjct: 177 LRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRP 236
Query: 1369 HSTIVALLLDRGA 1381
+ + LL GA
Sbjct: 237 NPILARLLRAHGA 249
Score = 47.4 bits (111), Expect = 6e-05, Method: Composition-based stats.
Identities = 70/280 (25%), Positives = 102/280 (36%), Gaps = 54/280 (19%)
Query: 1053 TKKGFTPLHLTGKYGHIKVAKLLLQKDAP---VDFQGKNGVTPLHVASHYDHQNVALLLL 1109
T+ G T LHL + H LL A +D Q G T LH+A+ + L
Sbjct: 6 TEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLY 65
Query: 1110 EKGASMDIATTLLEYGAKPNAESVAGFTPLHLSAS-EGHADMSAMLLEHGADVSHAAKNG 1168
GA + +A E G G T LHL+ H +L + A+
Sbjct: 66 AAGAGVLVA----ERG---------GHTALHLACRVRAHTCACVLLQPRPSHPRDASDTY 112
Query: 1169 LTPLHLCAQEDRVGVAELLLKNNA-------------QVDTPTKKGFTPLHIACHYGQIS 1215
LT C + A + + N Q++ G TPLH+A +
Sbjct: 113 LTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAE 172
Query: 1216 MARLLLDQSANVTVPKNFPSRXXXXXXXXXXXXXXYTNTTDQGFTPLHHSAQQGHSTIVA 1275
M RLL D A++ P+ R TPLH + + ++++
Sbjct: 173 MVRLLRDAGADLNKPEPTCGR-----------------------TPLHLAVEAQAASVLE 209
Query: 1276 LLLDRGASPNA-TNKGFTPLHHSAQQGHSTIVALLLDRGA 1314
LLL GA P A G TPL + + + + LL GA
Sbjct: 210 LLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGA 249
Score = 47.0 bits (110), Expect = 8e-05, Method: Composition-based stats.
Identities = 77/272 (28%), Positives = 105/272 (38%), Gaps = 52/272 (19%)
Query: 63 TRDGLTALHCAARSGHEAVIEMLLEQGAPISSKTKVRGFYILRSGHEAV-IEMLLEQG-- 119
T DG TALH A HE ++ LL GF +GHE + ++ L Q
Sbjct: 6 TEDGDTALHLAVIHQHEPFLDFLL-------------GF---SAGHEYLDLQNDLGQTAL 49
Query: 120 --APISSKTKVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGK 177
A I + L GA + + G T LHL + A +LLQ
Sbjct: 50 HLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRP------- 102
Query: 178 APVDDVTVDYLT-ALHVAAHCGHARVAKTLLDKKADP---------------NARALNGF 221
+ D + YLT + HA A +D + +P A +G
Sbjct: 103 SHPRDASDTYLTQSQDCTPDTSHAPAA---VDSQPNPENEEEPRDEDWRLQLEAENYDGH 159
Query: 222 TPLHIACKKNRIKVVELLLKHGASIEATTEV--REPMLHIACKKNRIKVVELLLKHGASI 279
TPLH+A ++V LL GA + R P LH+A + V+ELLLK GA
Sbjct: 160 TPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTP-LHLAVEAQAASVLELLLKAGADP 218
Query: 280 EATTE-VREPMLHIACKKNRIKVVELLLKHGA 310
A R P+ + N I + LL HGA
Sbjct: 219 TARMYGGRTPLGSALLRPNPI-LARLLRAHGA 249
Score = 44.3 bits (103), Expect = 4e-04, Method: Composition-based stats.
Identities = 54/216 (25%), Positives = 82/216 (37%), Gaps = 35/216 (16%)
Query: 991 QTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLE------ 1044
QT LH+A+ LG V L GA V + +TALH+A + A VLL+
Sbjct: 46 QTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHP 105
Query: 1045 NGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVD--------FQGKNGVTPLHVA 1096
AS T T+ + + ++ P D + +G TPLHVA
Sbjct: 106 RDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVA 165
Query: 1097 SHYDHQNVALLLLEKGASMD---------------------IATTLLEYGAKPNAESVAG 1135
+ + LL + GA ++ + LL+ GA P A G
Sbjct: 166 VIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGG 225
Query: 1136 FTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTP 1171
TPL + + ++ +L HGA + L+P
Sbjct: 226 RTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSP 261
Score = 43.9 bits (102), Expect = 7e-04, Method: Composition-based stats.
Identities = 58/244 (23%), Positives = 88/244 (36%), Gaps = 48/244 (19%)
Query: 1163 HAAKNGLTPLHLCAQEDRVGVAELLLKNNA---QVDTPTKKGFTPLHIACHYGQISMARL 1219
+ ++G T LHL + LL +A +D G T LH+A G+ S
Sbjct: 4 YVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEK 63
Query: 1220 LLDQSANVTVPKNFPSRXXXXXXXXXXXXXXYTNTTDQGFTPLHHSAQ-QGHSTIVALLL 1278
L A V V + G T LH + + + H+ LL
Sbjct: 64 LYAAGAGVLVAER------------------------GGHTALHLACRVRAHTCACVLLQ 99
Query: 1279 DRGASPNATNKGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTR--------------- 1323
R + P + + S A + + PN N+
Sbjct: 100 PRPSHPRDASDTYLTQSQDCTPDTSHAPAAV---DSQPNPENEEEPRDEDWRLQLEAENY 156
Query: 1324 -GFTPLHIACHYGQISMARLLLDQSANVSCTTDQ-GFTPLHHSAQQGHSTIVALLLDRGA 1381
G TPLH+A + M RLL D A+++ G TPLH + + ++++ LLL GA
Sbjct: 157 DGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGA 216
Query: 1382 SPNA 1385
P A
Sbjct: 217 DPTA 220
Score = 32.7 bits (73), Expect = 1.4, Method: Composition-based stats.
Identities = 67/252 (26%), Positives = 94/252 (37%), Gaps = 26/252 (10%)
Query: 143 TKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKAPVDDVTVDY-LTALHVAAHCGHAR 201
T+ G T LHL + H LL A ++ D+ D TALH+AA G A
Sbjct: 6 TEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYL------DLQNDLGQTALHLAAILGEAS 59
Query: 202 VAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKH-------------GASIEA 248
+ L A G T LH+AC+ +LL+ S +
Sbjct: 60 TVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDC 119
Query: 249 TTEVREPMLHIACKKNRIKVVELLLKH-GASIEATTEVREPMLHIACKKNRIKVVELLLK 307
T + + + N E + +EA LH+A ++V LL
Sbjct: 120 TPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRD 179
Query: 308 HGASIEATTEV--REPMLHIACKKNRIKVVELLLKHGASIEATTE-VREPMLHIACKKNR 364
GA + R P LH+A + V+ELLLK GA A R P+ + N
Sbjct: 180 AGADLNKPEPTCGRTP-LHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNP 238
Query: 365 IKVVELLLKHGA 376
I + LL HGA
Sbjct: 239 I-LARLLRAHGA 249
Score = 32.0 bits (71), Expect = 2.4, Method: Composition-based stats.
Identities = 66/247 (26%), Positives = 89/247 (36%), Gaps = 22/247 (8%)
Query: 183 VTVDYLTALHVAAHCGHARVAKTLLDKKADPNARALN---GFTPLHIACKKNRIKVVELL 239
VT D TALH+A H LL A L G T LH+A VE L
Sbjct: 5 VTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKL 64
Query: 240 LKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH-------------GASIEATTEVR 286
GA + LH+AC+ +LL+ S + T +
Sbjct: 65 YAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTS 124
Query: 287 EPMLHIACKKNRIKVVELLLKH-GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 345
+ + N E + +EA LH+A ++V LL GA +
Sbjct: 125 HAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADL 184
Query: 346 EATTEV--REPMLHIACKKNRIKVVELLLKHGASIEATTE-VREPMLHIACKKNRIKVVE 402
R P LH+A + V+ELLLK GA A R P+ + N I +
Sbjct: 185 NKPEPTCGRTP-LHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPI-LAR 242
Query: 403 LLLKHGA 409
LL HGA
Sbjct: 243 LLRAHGA 249
Score = 31.2 bits (69), Expect = 4.3, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 41/90 (45%), Gaps = 5/90 (5%)
Query: 356 LHIACKKNRIKVVELLLKHGASIEATTEV--REPMLHIACKKNRIKVVELLLKHGASIEA 413
LH+A ++V LL GA + R P LH+A + V+ELLLK GA A
Sbjct: 162 LHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTP-LHLAVEAQAASVLELLLKAGADPTA 220
Query: 414 TTE-VREPMLHIACKKNRIKVVELLLKHGA 442
R P+ + N I + LL HGA
Sbjct: 221 RMYGGRTPLGSALLRPNPI-LARLLRAHGA 249
Score = 31.2 bits (69), Expect = 4.3, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 41/90 (45%), Gaps = 5/90 (5%)
Query: 422 LHIACKKNRIKVVELLLKHGASIEATTEV--REPMLHIACKKNRIKVVELLLKHGASIEA 479
LH+A ++V LL GA + R P LH+A + V+ELLLK GA A
Sbjct: 162 LHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTP-LHLAVEAQAASVLELLLKAGADPTA 220
Query: 480 TTE-VREPMLHIACKKNRIKVVELLLKHGA 508
R P+ + N I + LL HGA
Sbjct: 221 RMYGGRTPLGSALLRPNPI-LARLLRAHGA 249
Score = 31.2 bits (69), Expect = 4.3, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 41/90 (45%), Gaps = 5/90 (5%)
Query: 488 LHIACKKNRIKVVELLLKHGASIEATTEV--REPMLHIACKKNRIKVVELLLKHGASIEA 545
LH+A ++V LL GA + R P LH+A + V+ELLLK GA A
Sbjct: 162 LHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTP-LHLAVEAQAASVLELLLKAGADPTA 220
Query: 546 TTE-VREPMLHIACKKNRIKVVELLLKHGA 574
R P+ + N I + LL HGA
Sbjct: 221 RMYGGRTPLGSALLRPNPI-LARLLRAHGA 249
Score = 31.2 bits (69), Expect = 4.3, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 41/90 (45%), Gaps = 5/90 (5%)
Query: 554 LHIACKKNRIKVVELLLKHGASIEATTEV--REPMLHIACKKNRIKVVELLLKHGASIEA 611
LH+A ++V LL GA + R P LH+A + V+ELLLK GA A
Sbjct: 162 LHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTP-LHLAVEAQAASVLELLLKAGADPTA 220
Query: 612 TTE-VREPMLHIACKKNRIKVVELLLKHGA 640
R P+ + N I + LL HGA
Sbjct: 221 RMYGGRTPLGSALLRPNPI-LARLLRAHGA 249
Score = 31.2 bits (69), Expect = 4.3, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 41/90 (45%), Gaps = 5/90 (5%)
Query: 620 LHIACKKNRIKVVELLLKHGASIEATTEV--REPMLHIACKKNRIKVVELLLKHGASIEA 677
LH+A ++V LL GA + R P LH+A + V+ELLLK GA A
Sbjct: 162 LHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTP-LHLAVEAQAASVLELLLKAGADPTA 220
Query: 678 TTE-VREPMLHIACKKNRIKVVELLLKHGA 706
R P+ + N I + LL HGA
Sbjct: 221 RMYGGRTPLGSALLRPNPI-LARLLRAHGA 249
Score = 31.2 bits (69), Expect = 4.3, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 41/90 (45%), Gaps = 5/90 (5%)
Query: 686 LHIACKKNRIKVVELLLKHGASIEATTEV--REPMLHIACKKNRIKVVELLLKHGASIEA 743
LH+A ++V LL GA + R P LH+A + V+ELLLK GA A
Sbjct: 162 LHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTP-LHLAVEAQAASVLELLLKAGADPTA 220
Query: 744 TTE-VREPMLHIACKKNRIKVVELLLKHGA 772
R P+ + N I + LL HGA
Sbjct: 221 RMYGGRTPLGSALLRPNPI-LARLLRAHGA 249
Score = 31.2 bits (69), Expect = 4.3, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 41/90 (45%), Gaps = 5/90 (5%)
Query: 752 LHIACKKNRIKVVELLLKHGASIEATTEV--REPMLHIACKKNRIKVVELLLKHGASIEA 809
LH+A ++V LL GA + R P LH+A + V+ELLLK GA A
Sbjct: 162 LHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTP-LHLAVEAQAASVLELLLKAGADPTA 220
Query: 810 TTE-VREPMLHIACKKNRIKVVELLLKHGA 838
R P+ + N I + LL HGA
Sbjct: 221 RMYGGRTPLGSALLRPNPI-LARLLRAHGA 249
Score = 31.2 bits (69), Expect = 4.3, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 41/90 (45%), Gaps = 5/90 (5%)
Query: 818 LHIACKKNRIKVVELLLKHGASIEATTEV--REPMLHIACKKNRIKVVELLLKHGASIEA 875
LH+A ++V LL GA + R P LH+A + V+ELLLK GA A
Sbjct: 162 LHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTP-LHLAVEAQAASVLELLLKAGADPTA 220
Query: 876 TTE-VREPMLHIACKKNRIKVVELLLKHGA 904
R P+ + N I + LL HGA
Sbjct: 221 RMYGGRTPLGSALLRPNPI-LARLLRAHGA 249
Score = 30.8 bits (68), Expect = 5.3, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 29/57 (50%)
Query: 35 TPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAP 91
TPLH+A + A+++ LLL GA+ + G T L A + + +L GAP
Sbjct: 194 TPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAP 250
>pdb|1NFI|E Chain E, I-Kappa-B-AlphaNF-Kappa-B Complex
pdb|1NFI|F Chain F, I-Kappa-B-AlphaNF-Kappa-B Complex
Length = 213
Score = 57.8 bits (138), Expect = 4e-08, Method: Composition-based stats.
Identities = 47/139 (33%), Positives = 66/139 (47%), Gaps = 15/139 (10%)
Query: 189 TALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLK-----HG 243
T LH+A +A+ LL DP R G TPLH+AC++ + V +L + H
Sbjct: 44 TPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHL 103
Query: 244 ASI-EATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREP-----MLHIACKKN 297
SI +AT LH+A + +VELL+ GA + A +EP LH+A
Sbjct: 104 HSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNA----QEPCNGRTALHLAVDLQ 159
Query: 298 RIKVVELLLKHGASIEATT 316
+V LLLK GA + T
Sbjct: 160 NPDLVSLLLKCGADVNRVT 178
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 46/156 (29%), Positives = 69/156 (44%), Gaps = 18/156 (11%)
Query: 1025 TALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQK------ 1078
T LH+A Q E+A LL G +G TPLHL + G + +L Q
Sbjct: 44 TPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHL 103
Query: 1079 DAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTP 1138
+ + NG T LH+AS + + + LL+ GA ++ E G T
Sbjct: 104 HSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNA------------QEPCNGRTA 151
Query: 1139 LHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHL 1174
LHL+ + D+ ++LL+ GADV+ G +P L
Sbjct: 152 LHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQL 187
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/111 (36%), Positives = 56/111 (50%), Gaps = 7/111 (6%)
Query: 1257 QGFTPLHHSAQQGHSTIVALLLDRGASPN------ATN-KGFTPLHHSAQQGHSTIVALL 1309
+G TPLH + +QG V +L +P+ ATN G T LH ++ G+ IV LL
Sbjct: 74 RGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELL 133
Query: 1310 LDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTP 1360
+ GA NA G T LH+A + LLL A+V+ T QG++P
Sbjct: 134 VSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSP 184
Score = 52.4 bits (124), Expect = 2e-06, Method: Composition-based stats.
Identities = 51/192 (26%), Positives = 89/192 (46%), Gaps = 10/192 (5%)
Query: 877 TEVREPMLHIAC----KKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 932
TE + LH+A K ++V+ + A + +++ LH+A N+ ++ E L
Sbjct: 2 TEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEAL 61
Query: 933 LKHGASSHVVSCYSNVKVHVSLNKIQDVSSSILRLATCDVLPQCETRLNFSNLRVREQQT 992
L G + N +H++ Q +S+ L P + L +N T
Sbjct: 62 LGAGCDPELRDFRGNTPLHLACE--QGCLASVGVLTQSCTTPHLHSILKATNY---NGHT 116
Query: 993 PLHIASRLGNVDIVMLLLQHGAAVDSTTK-DLYTALHIAAKEGQEEVAAVLLENGASLTS 1051
LH+AS G + IV LL+ GA V++ + TALH+A ++ ++LL+ GA +
Sbjct: 117 CLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNR 176
Query: 1052 TTKKGFTPLHLT 1063
T +G++P LT
Sbjct: 177 VTYQGYSPYQLT 188
Score = 51.2 bits (121), Expect = 4e-06, Method: Composition-based stats.
Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 8/151 (5%)
Query: 1058 TPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDI 1117
TPLHL ++A+ LL + + G TPLH+A +L + + +
Sbjct: 44 TPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHL 103
Query: 1118 ATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADV-SHAAKNGLTPLHLCA 1176
+ L A + G T LHL++ G+ + +L+ GADV + NG T LHL
Sbjct: 104 HSIL-------KATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAV 156
Query: 1177 QEDRVGVAELLLKNNAQVDTPTKKGFTPLHI 1207
+ LLLK A V+ T +G++P +
Sbjct: 157 DLQNPDLVSLLLKCGADVNRVTYQGYSPYQL 187
Score = 50.4 bits (119), Expect = 6e-06, Method: Composition-based stats.
Identities = 47/163 (28%), Positives = 70/163 (42%), Gaps = 21/163 (12%)
Query: 1170 TPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTV 1229
TPLHL ++ +AE LL + +G TPLH+AC G ++ +L + + T
Sbjct: 44 TPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVL---TQSCTT 100
Query: 1230 PKNFPSRXXXXXXXXXXXXXXYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATN- 1288
P T G T LH ++ G+ IV LL+ GA NA
Sbjct: 101 PH---------------LHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEP 145
Query: 1289 -KGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHI 1330
G T LH + + +V+LLL GA N +G++P +
Sbjct: 146 CNGRTALHLAVDLQNPDLVSLLLKCGADVNRVT-YQGYSPYQL 187
Score = 50.1 bits (118), Expect = 9e-06, Method: Composition-based stats.
Identities = 43/133 (32%), Positives = 62/133 (46%), Gaps = 9/133 (6%)
Query: 1260 TPLHHSAQQGHSTIVALLLDRGASPNATN-KGFTPLHHSAQQGHSTIVALLLDRGASPN- 1317
TPLH + I LL G P + +G TPLH + +QG V +L +P+
Sbjct: 44 TPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHL 103
Query: 1318 -----ATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTD-QGFTPLHHSAQQGHST 1371
ATN G T LH+A +G + + LL+ A+V+ G T LH + +
Sbjct: 104 HSILKATNYN-GHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPD 162
Query: 1372 IVALLLDRGASPN 1384
+V+LLL GA N
Sbjct: 163 LVSLLLKCGADVN 175
Score = 45.1 bits (105), Expect = 3e-04, Method: Composition-based stats.
Identities = 46/155 (29%), Positives = 64/155 (41%), Gaps = 20/155 (12%)
Query: 1080 APVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPL 1139
A ++FQ TPLH+A + +IA LL G P G TPL
Sbjct: 33 AFLNFQNNLQQTPLHLAVITNQP-------------EIAEALLGAGCDPELRDFRGNTPL 79
Query: 1140 HLSASEGHADMSAMLLE-----HGADVSHAAK-NGLTPLHLCAQEDRVGVAELLLKNNAQ 1193
HL+ +G +L + H + A NG T LHL + +G+ ELL+ A
Sbjct: 80 HLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGAD 139
Query: 1194 VDTPTK-KGFTPLHIACHYGQISMARLLLDQSANV 1227
V+ G T LH+A + LLL A+V
Sbjct: 140 VNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADV 174
Score = 44.7 bits (104), Expect = 4e-04, Method: Composition-based stats.
Identities = 51/181 (28%), Positives = 81/181 (44%), Gaps = 19/181 (10%)
Query: 316 TEVREPMLHIAC----KKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 371
TE + LH+A K ++V+ + A + +++ LH+A N+ ++ E L
Sbjct: 2 TEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEAL 61
Query: 372 LKHGASIEATTEVREPMLHIACKKNRIKVVELLLK-----HGASI-EATTEVREPMLHIA 425
L G E LH+AC++ + V +L + H SI +AT LH+A
Sbjct: 62 LGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLA 121
Query: 426 CKKNRIKVVELLLKHGASIEATTEVREP-----MLHIACKKNRIKVVELLLKHGASIEAT 480
+ +VELL+ GA + A +EP LH+A +V LLLK GA +
Sbjct: 122 SIHGYLGIVELLVSLGADVNA----QEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRV 177
Query: 481 T 481
T
Sbjct: 178 T 178
Score = 44.7 bits (104), Expect = 4e-04, Method: Composition-based stats.
Identities = 51/181 (28%), Positives = 81/181 (44%), Gaps = 19/181 (10%)
Query: 415 TEVREPMLHIAC----KKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 470
TE + LH+A K ++V+ + A + +++ LH+A N+ ++ E L
Sbjct: 2 TEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEAL 61
Query: 471 LKHGASIEATTEVREPMLHIACKKNRIKVVELLLK-----HGASI-EATTEVREPMLHIA 524
L G E LH+AC++ + V +L + H SI +AT LH+A
Sbjct: 62 LGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLA 121
Query: 525 CKKNRIKVVELLLKHGASIEATTEVREP-----MLHIACKKNRIKVVELLLKHGASIEAT 579
+ +VELL+ GA + A +EP LH+A +V LLLK GA +
Sbjct: 122 SIHGYLGIVELLVSLGADVNA----QEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRV 177
Query: 580 T 580
T
Sbjct: 178 T 178
Score = 44.7 bits (104), Expect = 4e-04, Method: Composition-based stats.
Identities = 51/181 (28%), Positives = 81/181 (44%), Gaps = 19/181 (10%)
Query: 514 TEVREPMLHIAC----KKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 569
TE + LH+A K ++V+ + A + +++ LH+A N+ ++ E L
Sbjct: 2 TEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEAL 61
Query: 570 LKHGASIEATTEVREPMLHIACKKNRIKVVELLLK-----HGASI-EATTEVREPMLHIA 623
L G E LH+AC++ + V +L + H SI +AT LH+A
Sbjct: 62 LGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLA 121
Query: 624 CKKNRIKVVELLLKHGASIEATTEVREP-----MLHIACKKNRIKVVELLLKHGASIEAT 678
+ +VELL+ GA + A +EP LH+A +V LLLK GA +
Sbjct: 122 SIHGYLGIVELLVSLGADVNA----QEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRV 177
Query: 679 T 679
T
Sbjct: 178 T 178
Score = 44.7 bits (104), Expect = 4e-04, Method: Composition-based stats.
Identities = 51/181 (28%), Positives = 81/181 (44%), Gaps = 19/181 (10%)
Query: 613 TEVREPMLHIAC----KKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 668
TE + LH+A K ++V+ + A + +++ LH+A N+ ++ E L
Sbjct: 2 TEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEAL 61
Query: 669 LKHGASIEATTEVREPMLHIACKKNRIKVVELLLK-----HGASI-EATTEVREPMLHIA 722
L G E LH+AC++ + V +L + H SI +AT LH+A
Sbjct: 62 LGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLA 121
Query: 723 CKKNRIKVVELLLKHGASIEATTEVREP-----MLHIACKKNRIKVVELLLKHGASIEAT 777
+ +VELL+ GA + A +EP LH+A +V LLLK GA +
Sbjct: 122 SIHGYLGIVELLVSLGADVNA----QEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRV 177
Query: 778 T 778
T
Sbjct: 178 T 178
Score = 44.7 bits (104), Expect = 4e-04, Method: Composition-based stats.
Identities = 51/181 (28%), Positives = 81/181 (44%), Gaps = 19/181 (10%)
Query: 712 TEVREPMLHIAC----KKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 767
TE + LH+A K ++V+ + A + +++ LH+A N+ ++ E L
Sbjct: 2 TEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEAL 61
Query: 768 LKHGASIEATTEVREPMLHIACKKNRIKVVELLLK-----HGASI-EATTEVREPMLHIA 821
L G E LH+AC++ + V +L + H SI +AT LH+A
Sbjct: 62 LGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLA 121
Query: 822 CKKNRIKVVELLLKHGASIEATTEVREP-----MLHIACKKNRIKVVELLLKHGASIEAT 876
+ +VELL+ GA + A +EP LH+A +V LLLK GA +
Sbjct: 122 SIHGYLGIVELLVSLGADVNA----QEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRV 177
Query: 877 T 877
T
Sbjct: 178 T 178
Score = 43.9 bits (102), Expect = 7e-04, Method: Composition-based stats.
Identities = 39/132 (29%), Positives = 61/132 (46%), Gaps = 3/132 (2%)
Query: 120 APISSKTKVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKAP 179
A I+++ ++A LL G +G TPLHL + G + +L Q +
Sbjct: 49 AVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLH--SI 106
Query: 180 VDDVTVDYLTALHVAAHCGHARVAKTLLDKKADPNAR-ALNGFTPLHIACKKNRIKVVEL 238
+ + T LH+A+ G+ + + L+ AD NA+ NG T LH+A +V L
Sbjct: 107 LKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSL 166
Query: 239 LLKHGASIEATT 250
LLK GA + T
Sbjct: 167 LLKCGADVNRVT 178
Score = 43.5 bits (101), Expect = 9e-04, Method: Composition-based stats.
Identities = 43/142 (30%), Positives = 66/142 (46%), Gaps = 15/142 (10%)
Query: 252 VREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK---- 307
+++ LH+A N+ ++ E LL G E LH+AC++ + V +L +
Sbjct: 41 LQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTT 100
Query: 308 -HGASI-EATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREP-----MLHIAC 360
H SI +AT LH+A + +VELL+ GA + A +EP LH+A
Sbjct: 101 PHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNA----QEPCNGRTALHLAV 156
Query: 361 KKNRIKVVELLLKHGASIEATT 382
+V LLLK GA + T
Sbjct: 157 DLQNPDLVSLLLKCGADVNRVT 178
Score = 40.8 bits (94), Expect = 0.005, Method: Composition-based stats.
Identities = 48/200 (24%), Positives = 84/200 (42%), Gaps = 34/200 (17%)
Query: 1103 NVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVS 1162
++A++ EK +M++ + A N ++ TPLHL+ +++ LL G D
Sbjct: 10 HLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPE 69
Query: 1163 HAAKNGLTPLHLCAQEDRVGVAELLLKN------NAQVDTPTKKGFTPLHIACHYGQISM 1216
G TPLHL ++ + +L ++ ++ + G T LH+A +G + +
Sbjct: 70 LRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGI 129
Query: 1217 ARLLLDQSANVTV--PKNFPSRXXXXXXXXXXXXXXYTNTTDQGFTPLHHSAQQGHSTIV 1274
LL+ A+V P N G T LH + + +V
Sbjct: 130 VELLVSLGADVNAQEPCN-------------------------GRTALHLAVDLQNPDLV 164
Query: 1275 ALLLDRGASPN-ATNKGFTP 1293
+LLL GA N T +G++P
Sbjct: 165 SLLLKCGADVNRVTYQGYSP 184
Score = 38.5 bits (88), Expect = 0.025, Method: Composition-based stats.
Identities = 41/155 (26%), Positives = 68/155 (43%), Gaps = 32/155 (20%)
Query: 29 HFQHNI--TPLHVAAKWGKANMVTLLLSRGANIDNKTRD--GLTALHCAARSGHEAVIEM 84
+FQ+N+ TPLH+A + + LL GA D + RD G T LH A G A + +
Sbjct: 36 NFQNNLQQTPLHLAVITNQPEIAEALL--GAGCDPELRDFRGNTPLHLACEQGCLASVGV 93
Query: 85 LLEQGA-----PISSKTKVRGFYILR----SGHEAVIEMLLEQGAPISSKT--------- 126
L + I T G L G+ ++E+L+ GA ++++
Sbjct: 94 LTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALH 153
Query: 127 --------KVAAVLLENGASLTSTTKKGFTPLHLT 153
+ ++LL+ GA + T +G++P LT
Sbjct: 154 LAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLT 188
Score = 38.5 bits (88), Expect = 0.029, Method: Composition-based stats.
Identities = 61/249 (24%), Positives = 99/249 (39%), Gaps = 57/249 (22%)
Query: 811 TEVREPMLHIAC----KKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 866
TE + LH+A K ++V+ + A + +++ LH+A N+ ++ E L
Sbjct: 2 TEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEAL 61
Query: 867 LKHGASIEATTEVREPMLHIACKKNRIKVVELLLK-----HGASI-EATTEVREPMLHIA 920
L G E LH+AC++ + V +L + H SI +AT LH+A
Sbjct: 62 LGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLA 121
Query: 921 CKKNRIKVVELLLKHGASSHVVSCYSNVKVHVSLNKIQDVSSSILRLATCDVLPQCETRL 980
+ +VELL+ GA DV++ C R
Sbjct: 122 SIHGYLGIVELLVSLGA---------------------DVNAQ----------EPCNGR- 149
Query: 981 NFSNLRVREQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIA----AKEGQE 1036
T LH+A L N D+V LLL+ GA V+ T Y+ + + Q+
Sbjct: 150 -----------TALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQ 198
Query: 1037 EVAAVLLEN 1045
++ + LEN
Sbjct: 199 QLGQLTLEN 207
>pdb|1AP7|A Chain A, P19-Ink4d From Mouse, Nmr, 20 Structures
Length = 168
Score = 57.4 bits (137), Expect = 5e-08, Method: Composition-based stats.
Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 1/104 (0%)
Query: 1117 IATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCA 1176
+A LL+ GA PN + +G +P+H +A G D +L+EHGADV+ G P+HL
Sbjct: 58 VALELLKQGASPNVQDASGTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAI 117
Query: 1177 QEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLL 1220
+E V L + + G TPL +A G ++ +L
Sbjct: 118 REGHSSVVSFLAP-ESDLHHRDASGLTPLELARQRGAQNLMDIL 160
Score = 49.3 bits (116), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/116 (29%), Positives = 58/116 (50%), Gaps = 2/116 (1%)
Query: 1262 LHHSAQQGHSTIVALLLDRG-ASPNATNKGFTPLHHSAQQGHSTIVALLLDRGASPNATN 1320
L +A +G V LL R P+A N+ G + LL +GASPN +
Sbjct: 14 LSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSPAVALELLKQGASPNVQD 73
Query: 1321 KTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALL 1376
+ G +P+H A G + ++L++ A+V+ G P+H + ++GHS++V+ L
Sbjct: 74 AS-GTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREGHSSVVSFL 128
Score = 46.2 bits (108), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 55/109 (50%), Gaps = 1/109 (0%)
Query: 1000 LGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTP 1059
G+ + + LL+ GA+ + + +H AA+ G + VL+E+GA + + G P
Sbjct: 53 FGSPAVALELLKQGASPNVQDASGTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLP 112
Query: 1060 LHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLL 1108
+HL + GH V L ++ + + +G+TPL +A QN+ +L
Sbjct: 113 IHLAIREGHSSVVS-FLAPESDLHHRDASGLTPLELARQRGAQNLMDIL 160
Score = 42.4 bits (98), Expect = 0.002, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 984 NLRVREQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLL 1043
N++ +P+H A+R G +D + +L++HGA V++ +H+A +EG V + L
Sbjct: 70 NVQDASGTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREGHSSVVSFLA 129
Query: 1044 ENGASLTSTTKKGFTPLHLTGKYG 1067
+ L G TPL L + G
Sbjct: 130 PE-SDLHHRDASGLTPLELARQRG 152
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 189 TALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEA 248
TAL V G VA LL + A PN + +G +P+H A + + +++L++HGA + A
Sbjct: 46 TALQVMMF-GSPAVALELLKQGASPNVQDASGTSPVHDAARTGFLDTLKVLVEHGADVNA 104
Query: 249 TTEVREPMLHIACKKNRIKVVELL 272
+H+A ++ VV L
Sbjct: 105 LDSTGSLPIHLAIREGHSSVVSFL 128
Score = 41.2 bits (95), Expect = 0.004, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 56/118 (47%), Gaps = 15/118 (12%)
Query: 128 VAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPV---DFQGKAPVDDVT 184
VA LL+ GAS G +P+H + G + K+L++ A V D G P+
Sbjct: 58 VALELLKQGASPNVQDASGTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPI---- 113
Query: 185 VDYLTALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKH 242
H+A GH+ V + L ++D + R +G TPL +A ++ ++++L H
Sbjct: 114 -------HLAIREGHSSVV-SFLAPESDLHHRDASGLTPLELARQRGAQNLMDILQGH 163
Score = 41.2 bits (95), Expect = 0.004, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 51/124 (41%), Gaps = 14/124 (11%)
Query: 1034 GQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPL 1093
G VA LL+ GAS G +P+H + G + K+L++ A V+ G P+
Sbjct: 54 GSPAVALELLKQGASPNVQDASGTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPI 113
Query: 1094 HVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAM 1153
H+A H +V L + + + +G TPL L+ G ++ +
Sbjct: 114 HLAIREGHSSVVSFLAPE--------------SDLHHRDASGLTPLELARQRGAQNLMDI 159
Query: 1154 LLEH 1157
L H
Sbjct: 160 LQGH 163
Score = 38.1 bits (87), Expect = 0.037, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 53/129 (41%), Gaps = 26/129 (20%)
Query: 1182 GVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRXXXXX 1241
VA LLK A + G +P+H A G + ++L++ A+V
Sbjct: 57 AVALELLKQGASPNVQDASGTSPVHDAARTGFLDTLKVLVEHGADV-------------- 102
Query: 1242 XXXXXXXXXYTNTTDQ-GFTPLHHSAQQGHSTIVALLLDRGASPNATNKGFTPLHHSAQQ 1300
N D G P+H + ++GHS++V+ L + G TPL + Q+
Sbjct: 103 -----------NALDSTGSLPIHLAIREGHSSVVSFLAPESDLHHRDASGLTPLELARQR 151
Query: 1301 GHSTIVALL 1309
G ++ +L
Sbjct: 152 GAQNLMDIL 160
Score = 35.0 bits (79), Expect = 0.32, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 29/51 (56%)
Query: 35 TPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEML 85
+P+H AA+ G + + +L+ GA+++ G +H A R GH +V+ L
Sbjct: 78 SPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREGHSSVVSFL 128
Score = 34.3 bits (77), Expect = 0.53, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 43 WGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISSKTKVRGFY 102
+G + LL +GA+ + + G + +H AAR+G +++L+E GA +++
Sbjct: 53 FGSPAVALELLKQGASPNVQDASGTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLP 112
Query: 103 I---LRSGHEAVIEML 115
I +R GH +V+ L
Sbjct: 113 IHLAIREGHSSVVSFL 128
Score = 33.1 bits (74), Expect = 1.0, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Query: 1128 PNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELL 1187
P+A + G T L + G ++ LL+ GA + +G +P+H A+ + ++L
Sbjct: 37 PDALNRFGKTALQVMMF-GSPAVALELLKQGASPNVQDASGTSPVHDAARTGFLDTLKVL 95
Query: 1188 LKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQS 1224
+++ A V+ G P+H+A G S+ L +S
Sbjct: 96 VEHGADVNALDSTGSLPIHLAIREGHSSVVSFLAPES 132
Score = 30.8 bits (68), Expect = 5.7, Method: Composition-based stats.
Identities = 29/113 (25%), Positives = 50/113 (44%), Gaps = 2/113 (1%)
Query: 194 AAHCGHARVAKTLLDKK-ADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEV 252
AA G + + LL ++ P+A G T L + + +ELL K GAS
Sbjct: 17 AAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSPAVALELL-KQGASPNVQDAS 75
Query: 253 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 305
+H A + + +++L++HGA + A +H+A ++ VV L
Sbjct: 76 GTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREGHSSVVSFL 128
Score = 30.0 bits (66), Expect = 8.3, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 31/67 (46%)
Query: 272 LLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNR 331
LLK GAS +H A + + +++L++HGA + A +H+A ++
Sbjct: 62 LLKQGASPNVQDASGTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREGH 121
Query: 332 IKVVELL 338
VV L
Sbjct: 122 SSVVSFL 128
Score = 30.0 bits (66), Expect = 8.3, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 31/67 (46%)
Query: 305 LLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNR 364
LLK GAS +H A + + +++L++HGA + A +H+A ++
Sbjct: 62 LLKQGASPNVQDASGTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREGH 121
Query: 365 IKVVELL 371
VV L
Sbjct: 122 SSVVSFL 128
Score = 30.0 bits (66), Expect = 8.3, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 31/67 (46%)
Query: 338 LLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNR 397
LLK GAS +H A + + +++L++HGA + A +H+A ++
Sbjct: 62 LLKQGASPNVQDASGTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREGH 121
Query: 398 IKVVELL 404
VV L
Sbjct: 122 SSVVSFL 128
Score = 30.0 bits (66), Expect = 8.3, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 31/67 (46%)
Query: 371 LLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNR 430
LLK GAS +H A + + +++L++HGA + A +H+A ++
Sbjct: 62 LLKQGASPNVQDASGTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREGH 121
Query: 431 IKVVELL 437
VV L
Sbjct: 122 SSVVSFL 128
Score = 30.0 bits (66), Expect = 8.3, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 31/67 (46%)
Query: 404 LLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNR 463
LLK GAS +H A + + +++L++HGA + A +H+A ++
Sbjct: 62 LLKQGASPNVQDASGTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREGH 121
Query: 464 IKVVELL 470
VV L
Sbjct: 122 SSVVSFL 128
Score = 30.0 bits (66), Expect = 8.3, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 31/67 (46%)
Query: 437 LLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNR 496
LLK GAS +H A + + +++L++HGA + A +H+A ++
Sbjct: 62 LLKQGASPNVQDASGTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREGH 121
Query: 497 IKVVELL 503
VV L
Sbjct: 122 SSVVSFL 128
Score = 30.0 bits (66), Expect = 8.3, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 31/67 (46%)
Query: 470 LLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNR 529
LLK GAS +H A + + +++L++HGA + A +H+A ++
Sbjct: 62 LLKQGASPNVQDASGTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREGH 121
Query: 530 IKVVELL 536
VV L
Sbjct: 122 SSVVSFL 128
Score = 30.0 bits (66), Expect = 8.3, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 31/67 (46%)
Query: 503 LLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNR 562
LLK GAS +H A + + +++L++HGA + A +H+A ++
Sbjct: 62 LLKQGASPNVQDASGTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREGH 121
Query: 563 IKVVELL 569
VV L
Sbjct: 122 SSVVSFL 128
Score = 30.0 bits (66), Expect = 8.3, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 31/67 (46%)
Query: 536 LLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNR 595
LLK GAS +H A + + +++L++HGA + A +H+A ++
Sbjct: 62 LLKQGASPNVQDASGTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREGH 121
Query: 596 IKVVELL 602
VV L
Sbjct: 122 SSVVSFL 128
Score = 30.0 bits (66), Expect = 8.3, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 31/67 (46%)
Query: 569 LLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNR 628
LLK GAS +H A + + +++L++HGA + A +H+A ++
Sbjct: 62 LLKQGASPNVQDASGTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREGH 121
Query: 629 IKVVELL 635
VV L
Sbjct: 122 SSVVSFL 128
Score = 30.0 bits (66), Expect = 8.3, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 31/67 (46%)
Query: 602 LLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNR 661
LLK GAS +H A + + +++L++HGA + A +H+A ++
Sbjct: 62 LLKQGASPNVQDASGTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREGH 121
Query: 662 IKVVELL 668
VV L
Sbjct: 122 SSVVSFL 128
Score = 30.0 bits (66), Expect = 8.3, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 31/67 (46%)
Query: 635 LLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNR 694
LLK GAS +H A + + +++L++HGA + A +H+A ++
Sbjct: 62 LLKQGASPNVQDASGTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREGH 121
Query: 695 IKVVELL 701
VV L
Sbjct: 122 SSVVSFL 128
Score = 30.0 bits (66), Expect = 8.3, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 31/67 (46%)
Query: 668 LLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNR 727
LLK GAS +H A + + +++L++HGA + A +H+A ++
Sbjct: 62 LLKQGASPNVQDASGTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREGH 121
Query: 728 IKVVELL 734
VV L
Sbjct: 122 SSVVSFL 128
Score = 30.0 bits (66), Expect = 8.3, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 31/67 (46%)
Query: 701 LLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNR 760
LLK GAS +H A + + +++L++HGA + A +H+A ++
Sbjct: 62 LLKQGASPNVQDASGTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREGH 121
Query: 761 IKVVELL 767
VV L
Sbjct: 122 SSVVSFL 128
Score = 30.0 bits (66), Expect = 8.3, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 31/67 (46%)
Query: 734 LLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNR 793
LLK GAS +H A + + +++L++HGA + A +H+A ++
Sbjct: 62 LLKQGASPNVQDASGTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREGH 121
Query: 794 IKVVELL 800
VV L
Sbjct: 122 SSVVSFL 128
Score = 30.0 bits (66), Expect = 8.3, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 31/67 (46%)
Query: 767 LLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNR 826
LLK GAS +H A + + +++L++HGA + A +H+A ++
Sbjct: 62 LLKQGASPNVQDASGTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREGH 121
Query: 827 IKVVELL 833
VV L
Sbjct: 122 SSVVSFL 128
Score = 30.0 bits (66), Expect = 8.3, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 31/67 (46%)
Query: 800 LLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNR 859
LLK GAS +H A + + +++L++HGA + A +H+A ++
Sbjct: 62 LLKQGASPNVQDASGTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREGH 121
Query: 860 IKVVELL 866
VV L
Sbjct: 122 SSVVSFL 128
Score = 30.0 bits (66), Expect = 8.3, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 31/67 (46%)
Query: 833 LLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNR 892
LLK GAS +H A + + +++L++HGA + A +H+A ++
Sbjct: 62 LLKQGASPNVQDASGTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREGH 121
Query: 893 IKVVELL 899
VV L
Sbjct: 122 SSVVSFL 128
Score = 30.0 bits (66), Expect = 8.3, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 31/67 (46%)
Query: 866 LLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNR 925
LLK GAS +H A + + +++L++HGA + A +H+A ++
Sbjct: 62 LLKQGASPNVQDASGTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREGH 121
Query: 926 IKVVELL 932
VV L
Sbjct: 122 SSVVSFL 128
>pdb|1BLX|B Chain B, P19ink4dCDK6 COMPLEX
Length = 166
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 1/104 (0%)
Query: 1117 IATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCA 1176
+A LL+ GA PN + +G +P+H +A G D +L+EHGADV+ G P+HL
Sbjct: 56 VALELLKQGASPNVQDASGTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAI 115
Query: 1177 QEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLL 1220
+E V L + + G TPL +A G ++ +L
Sbjct: 116 REGHSSVVS-FLAPESDLHHRDASGLTPLELARQRGAQNLMDIL 158
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 1303 STIVAL-LLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPL 1361
S VAL LL +GASPN + + G +P+H A G + ++L++ A+V+ G P+
Sbjct: 53 SPAVALELLKQGASPNVQDAS-GTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPI 111
Query: 1362 HHSAQQGHSTIVALL 1376
H + ++GHS++V+ L
Sbjct: 112 HLAIREGHSSVVSFL 126
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 55/109 (50%), Gaps = 1/109 (0%)
Query: 1000 LGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTP 1059
G+ + + LL+ GA+ + + +H AA+ G + VL+E+GA + + G P
Sbjct: 51 FGSPAVALELLKQGASPNVQDASGTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLP 110
Query: 1060 LHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLL 1108
+HL + GH V L ++ + + +G+TPL +A QN+ +L
Sbjct: 111 IHLAIREGHSSVVS-FLAPESDLHHRDASGLTPLELARQRGAQNLMDIL 158
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 189 TALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEA 248
TAL V G VA LL + A PN + +G +P+H A + + +++L++HGA + A
Sbjct: 44 TALQVMM-FGSPAVALELLKQGASPNVQDASGTSPVHDAARTGFLDTLKVLVEHGADVNA 102
Query: 249 TTEVREPMLHIACKKNRIKVVELL 272
+H+A ++ VV L
Sbjct: 103 LDSTGSLPIHLAIREGHSSVVSFL 126
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 22/141 (15%)
Query: 105 RSGHEAVIEMLLEQGAPISSKTKVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKL 164
R G A+ M+ G+P VA LL+ GAS G +P+H + G + K+
Sbjct: 40 RFGKTALQVMMF--GSP-----AVALELLKQGASPNVQDASGTSPVHDAARTGFLDTLKV 92
Query: 165 LLQKDAPV---DFQGKAPVDDVTVDYLTALHVAAHCGHARVAKTLLDKKADPNARALNGF 221
L++ A V D G P+ H+A GH+ V + L ++D + R +G
Sbjct: 93 LVEHGADVNALDSTGSLPI-----------HLAIREGHSSVV-SFLAPESDLHHRDASGL 140
Query: 222 TPLHIACKKNRIKVVELLLKH 242
TPL +A ++ ++++L H
Sbjct: 141 TPLELARQRGAQNLMDILQGH 161
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 984 NLRVREQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLL 1043
N++ +P+H A+R G +D + +L++HGA V++ +H+A +EG V + L
Sbjct: 68 NVQDASGTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREGHSSVVSFLA 127
Query: 1044 ENGASLTSTTKKGFTPLHLTGKYGHIKVAKLL 1075
+ L G TPL L + G + +L
Sbjct: 128 PE-SDLHHRDASGLTPLELARQRGAQNLMDIL 158
Score = 38.9 bits (89), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 51/124 (41%), Gaps = 14/124 (11%)
Query: 1034 GQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPL 1093
G VA LL+ GAS G +P+H + G + K+L++ A V+ G P+
Sbjct: 52 GSPAVALELLKQGASPNVQDASGTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPI 111
Query: 1094 HVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAM 1153
H+A H +V + L + + +G TPL L+ G ++ +
Sbjct: 112 HLAIREGHSSV--------------VSFLAPESDLHHRDASGLTPLELARQRGAQNLMDI 157
Query: 1154 LLEH 1157
L H
Sbjct: 158 LQGH 161
Score = 36.6 bits (83), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 53/128 (41%), Gaps = 26/128 (20%)
Query: 1183 VAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRXXXXXX 1242
VA LLK A + G +P+H A G + ++L++ A+V
Sbjct: 56 VALELLKQGASPNVQDASGTSPVHDAARTGFLDTLKVLVEHGADV--------------- 100
Query: 1243 XXXXXXXXYTNTTDQ-GFTPLHHSAQQGHSTIVALLLDRGASPNATNKGFTPLHHSAQQG 1301
N D G P+H + ++GHS++V+ L + G TPL + Q+G
Sbjct: 101 ----------NALDSTGSLPIHLAIREGHSSVVSFLAPESDLHHRDASGLTPLELARQRG 150
Query: 1302 HSTIVALL 1309
++ +L
Sbjct: 151 AQNLMDIL 158
Score = 36.2 bits (82), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 62/148 (41%), Gaps = 28/148 (18%)
Query: 21 NTINPFGSHFQHNITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEA 80
+ +N FG T L V +G + LL +GA+ + + G + +H AAR+G
Sbjct: 36 DALNRFGK------TALQVM-MFGSPAVALELLKQGASPNVQDASGTSPVHDAARTGFLD 88
Query: 81 VIEMLLEQGAPISSKTKVRGFYI---LRSGHEAVIEMLLEQGAPISSKTKVAAVLLENGA 137
+++L+E GA +++ I +R GH +V+ L AP S
Sbjct: 89 TLKVLVEHGADVNALDSTGSLPIHLAIREGHSSVVSFL----APES-------------- 130
Query: 138 SLTSTTKKGFTPLHLTGKYGHIKVAKLL 165
L G TPL L + G + +L
Sbjct: 131 DLHHRDASGLTPLELARQRGAQNLMDIL 158
Score = 32.7 bits (73), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
Query: 213 PNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 272
P+A G T L + + +ELL K GAS +H A + + +++L
Sbjct: 35 PDALNRFGKTALQVMMFGSPAVALELL-KQGASPNVQDASGTSPVHDAARTGFLDTLKVL 93
Query: 273 LKHGASIEATTEVREPMLHIACKKNRIKVVELL 305
++HGA + A +H+A ++ VV L
Sbjct: 94 VEHGADVNALDSTGSLPIHLAIREGHSSVVSFL 126
Score = 32.0 bits (71), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 31/67 (46%)
Query: 272 LLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNR 331
LLK GAS +H A + + +++L++HGA + A +H+A ++
Sbjct: 60 LLKQGASPNVQDASGTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREGH 119
Query: 332 IKVVELL 338
VV L
Sbjct: 120 SSVVSFL 126
Score = 32.0 bits (71), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 31/67 (46%)
Query: 305 LLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNR 364
LLK GAS +H A + + +++L++HGA + A +H+A ++
Sbjct: 60 LLKQGASPNVQDASGTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREGH 119
Query: 365 IKVVELL 371
VV L
Sbjct: 120 SSVVSFL 126
Score = 32.0 bits (71), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 31/67 (46%)
Query: 338 LLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNR 397
LLK GAS +H A + + +++L++HGA + A +H+A ++
Sbjct: 60 LLKQGASPNVQDASGTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREGH 119
Query: 398 IKVVELL 404
VV L
Sbjct: 120 SSVVSFL 126
Score = 32.0 bits (71), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 31/67 (46%)
Query: 371 LLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNR 430
LLK GAS +H A + + +++L++HGA + A +H+A ++
Sbjct: 60 LLKQGASPNVQDASGTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREGH 119
Query: 431 IKVVELL 437
VV L
Sbjct: 120 SSVVSFL 126
Score = 32.0 bits (71), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 31/67 (46%)
Query: 404 LLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNR 463
LLK GAS +H A + + +++L++HGA + A +H+A ++
Sbjct: 60 LLKQGASPNVQDASGTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREGH 119
Query: 464 IKVVELL 470
VV L
Sbjct: 120 SSVVSFL 126
Score = 32.0 bits (71), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 31/67 (46%)
Query: 437 LLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNR 496
LLK GAS +H A + + +++L++HGA + A +H+A ++
Sbjct: 60 LLKQGASPNVQDASGTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREGH 119
Query: 497 IKVVELL 503
VV L
Sbjct: 120 SSVVSFL 126
Score = 32.0 bits (71), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 31/67 (46%)
Query: 470 LLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNR 529
LLK GAS +H A + + +++L++HGA + A +H+A ++
Sbjct: 60 LLKQGASPNVQDASGTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREGH 119
Query: 530 IKVVELL 536
VV L
Sbjct: 120 SSVVSFL 126
Score = 32.0 bits (71), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 31/67 (46%)
Query: 503 LLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNR 562
LLK GAS +H A + + +++L++HGA + A +H+A ++
Sbjct: 60 LLKQGASPNVQDASGTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREGH 119
Query: 563 IKVVELL 569
VV L
Sbjct: 120 SSVVSFL 126
Score = 32.0 bits (71), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 31/67 (46%)
Query: 536 LLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNR 595
LLK GAS +H A + + +++L++HGA + A +H+A ++
Sbjct: 60 LLKQGASPNVQDASGTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREGH 119
Query: 596 IKVVELL 602
VV L
Sbjct: 120 SSVVSFL 126
Score = 32.0 bits (71), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 31/67 (46%)
Query: 569 LLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNR 628
LLK GAS +H A + + +++L++HGA + A +H+A ++
Sbjct: 60 LLKQGASPNVQDASGTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREGH 119
Query: 629 IKVVELL 635
VV L
Sbjct: 120 SSVVSFL 126
Score = 32.0 bits (71), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 31/67 (46%)
Query: 602 LLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNR 661
LLK GAS +H A + + +++L++HGA + A +H+A ++
Sbjct: 60 LLKQGASPNVQDASGTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREGH 119
Query: 662 IKVVELL 668
VV L
Sbjct: 120 SSVVSFL 126
Score = 32.0 bits (71), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 31/67 (46%)
Query: 635 LLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNR 694
LLK GAS +H A + + +++L++HGA + A +H+A ++
Sbjct: 60 LLKQGASPNVQDASGTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREGH 119
Query: 695 IKVVELL 701
VV L
Sbjct: 120 SSVVSFL 126
Score = 32.0 bits (71), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 31/67 (46%)
Query: 668 LLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNR 727
LLK GAS +H A + + +++L++HGA + A +H+A ++
Sbjct: 60 LLKQGASPNVQDASGTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREGH 119
Query: 728 IKVVELL 734
VV L
Sbjct: 120 SSVVSFL 126
Score = 32.0 bits (71), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 31/67 (46%)
Query: 701 LLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNR 760
LLK GAS +H A + + +++L++HGA + A +H+A ++
Sbjct: 60 LLKQGASPNVQDASGTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREGH 119
Query: 761 IKVVELL 767
VV L
Sbjct: 120 SSVVSFL 126
Score = 32.0 bits (71), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 31/67 (46%)
Query: 734 LLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNR 793
LLK GAS +H A + + +++L++HGA + A +H+A ++
Sbjct: 60 LLKQGASPNVQDASGTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREGH 119
Query: 794 IKVVELL 800
VV L
Sbjct: 120 SSVVSFL 126
Score = 32.0 bits (71), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 31/67 (46%)
Query: 767 LLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNR 826
LLK GAS +H A + + +++L++HGA + A +H+A ++
Sbjct: 60 LLKQGASPNVQDASGTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREGH 119
Query: 827 IKVVELL 833
VV L
Sbjct: 120 SSVVSFL 126
Score = 32.0 bits (71), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 31/67 (46%)
Query: 800 LLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNR 859
LLK GAS +H A + + +++L++HGA + A +H+A ++
Sbjct: 60 LLKQGASPNVQDASGTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREGH 119
Query: 860 IKVVELL 866
VV L
Sbjct: 120 SSVVSFL 126
Score = 32.0 bits (71), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 31/67 (46%)
Query: 833 LLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNR 892
LLK GAS +H A + + +++L++HGA + A +H+A ++
Sbjct: 60 LLKQGASPNVQDASGTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREGH 119
Query: 893 IKVVELL 899
VV L
Sbjct: 120 SSVVSFL 126
Score = 32.0 bits (71), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 31/67 (46%)
Query: 866 LLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNR 925
LLK GAS +H A + + +++L++HGA + A +H+A ++
Sbjct: 60 LLKQGASPNVQDASGTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREGH 119
Query: 926 IKVVELL 932
VV L
Sbjct: 120 SSVVSFL 126
Score = 31.6 bits (70), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 36/71 (50%)
Query: 1154 LLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQ 1213
LL+ GA + +G +P+H A+ + ++L+++ A V+ G P+H+A G
Sbjct: 60 LLKQGASPNVQDASGTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREGH 119
Query: 1214 ISMARLLLDQS 1224
S+ L +S
Sbjct: 120 SSVVSFLAPES 130
>pdb|1MX6|A Chain A, Structure Of P18ink4c (F92n)
pdb|1MX6|B Chain B, Structure Of P18ink4c (F92n)
Length = 168
Score = 55.8 bits (133), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/116 (32%), Positives = 55/116 (47%), Gaps = 1/116 (0%)
Query: 999 RLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFT 1058
+LGN +I LL GA D + + +H AA+ G + LLEN A + +G
Sbjct: 46 KLGNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLENQADVNIEDNEGNL 105
Query: 1059 PLHLTGKYGHIKVAKLLLQKDAP-VDFQGKNGVTPLHVASHYDHQNVALLLLEKGA 1113
PLHL K GH++V + L++ A V + G T +A Y V L+ GA
Sbjct: 106 PLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGA 161
Score = 55.8 bits (133), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/106 (36%), Positives = 54/106 (50%), Gaps = 1/106 (0%)
Query: 1116 DIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLC 1175
+IA LL GA P+ + GF +H +A G D LLE+ ADV+ G PLHL
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLENQADVNIEDNEGNLPLHLA 110
Query: 1176 AQEDRVGVAELLLKNNA-QVDTPTKKGFTPLHIACHYGQISMARLL 1220
A+E + V E L+K+ A V KG T +A YG+ + L+
Sbjct: 111 AKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLM 156
Score = 50.8 bits (120), Expect = 6e-06, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 1301 GHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTP 1360
G+ I LL RGA+P+ ++T GF +H A G + + LL+ A+V+ ++G P
Sbjct: 48 GNPEIARRLLLRGANPDLKDRT-GFAVIHDAARAGFLDTLQTLLENQADVNIEDNEGNLP 106
Query: 1361 LHHSAQQGHSTIVALLLDRGAS 1382
LH +A++GH +V L+ AS
Sbjct: 107 LHLAAKEGHLRVVEFLVKHTAS 128
Score = 48.1 bits (113), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 189 TALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEA 248
TAL V G+ +A+ LL + A+P+ + GF +H A + + ++ LL++ A +
Sbjct: 40 TALQVMK-LGNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLENQADVNI 98
Query: 249 TTEVREPMLHIACKKNRIKVVELLLKHGAS 278
LH+A K+ ++VVE L+KH AS
Sbjct: 99 EDNEGNLPLHLAAKEGHLRVVEFLVKHTAS 128
Score = 44.3 bits (103), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Query: 1025 TALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDF 1084
TAL + K G E+A LL GA+ + GF +H + G + + LL+ A V+
Sbjct: 40 TALQVM-KLGNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLENQADVNI 98
Query: 1085 QGKNGVTPLHVASHYDHQNVALLLLEKGAS 1114
+ G PLH+A+ H V L++ AS
Sbjct: 99 EDNEGNLPLHLAAKEGHLRVVEFLVKHTAS 128
Score = 40.8 bits (94), Expect = 0.005, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 1258 GFTPLHHSAQQGHSTIVALLLDRGASPN-ATNKGFTPLHHSAQQGHSTIVALLLDRGASP 1316
GF +H +A+ G + LL+ A N N+G PLH +A++GH +V L+ AS
Sbjct: 70 GFAVIHDAARAGFLDTLQTLLENQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASN 129
Query: 1317 NATNKTRGFTPLHIACHYGQISMARLL 1343
+G T +A YG+ + L+
Sbjct: 130 VGHRNHKGDTACDLARLYGRNEVVSLM 156
Score = 40.4 bits (93), Expect = 0.007, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 42 KWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPIS---SKTKV 98
K G + LL RGAN D K R G +H AAR+G ++ LLE A ++ ++ +
Sbjct: 46 KLGNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLENQADVNIEDNEGNL 105
Query: 99 RGFYILRSGHEAVIEMLLEQGA 120
+ GH V+E L++ A
Sbjct: 106 PLHLAAKEGHLRVVEFLVKHTA 127
Score = 39.7 bits (91), Expect = 0.011, Method: Composition-based stats.
Identities = 37/140 (26%), Positives = 58/140 (41%), Gaps = 27/140 (19%)
Query: 1183 VAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRXXXXXX 1242
+A LL A D + GF +H A G + + LL+ A+V + N
Sbjct: 52 IARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLENQADVNIEDN---------- 101
Query: 1243 XXXXXXXXYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASP--NATNKGFTPLHHSAQQ 1300
+G PLH +A++GH +V L+ AS + +KG T +
Sbjct: 102 --------------EGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLY 147
Query: 1301 GHSTIVALLLDRGASPNATN 1320
G + +V+L+ GA ATN
Sbjct: 148 GRNEVVSLMQANGAG-GATN 166
Score = 39.7 bits (91), Expect = 0.013, Method: Composition-based stats.
Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 1/113 (0%)
Query: 964 ILRLATCDVLPQCETRLNFSNLRVREQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDL 1023
+++L ++ + R +L+ R +H A+R G +D + LL++ A V+ +
Sbjct: 44 VMKLGNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLENQADVNIEDNEG 103
Query: 1024 YTALHIAAKEGQEEVAAVLLENGAS-LTSTTKKGFTPLHLTGKYGHIKVAKLL 1075
LH+AAKEG V L+++ AS + KG T L YG +V L+
Sbjct: 104 NLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLM 156
Score = 38.1 bits (87), Expect = 0.032, Method: Composition-based stats.
Identities = 21/81 (25%), Positives = 40/81 (49%)
Query: 1146 GHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPL 1205
G+ +++ LL GA+ + G +H A+ + + LL+N A V+ +G PL
Sbjct: 48 GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLENQADVNIEDNEGNLPL 107
Query: 1206 HIACHYGQISMARLLLDQSAN 1226
H+A G + + L+ +A+
Sbjct: 108 HLAAKEGHLRVVEFLVKHTAS 128
Score = 36.2 bits (82), Expect = 0.12, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 54/122 (44%), Gaps = 15/122 (12%)
Query: 127 KVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPV---DFQGKAPVDDV 183
++A LL GA+ + GF +H + G + + LL+ A V D +G P
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLENQADVNIEDNEGNLP---- 106
Query: 184 TVDYLTALHVAAHCGHARVAKTLLDKKA-DPNARALNGFTPLHIACKKNRIKVVELLLKH 242
LH+AA GH RV + L+ A + R G T +A R +VV L+ +
Sbjct: 107 -------LHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQAN 159
Query: 243 GA 244
GA
Sbjct: 160 GA 161
Score = 35.0 bits (79), Expect = 0.29, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 40/79 (50%)
Query: 861 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 920
++ LL GA+ + ++H A + + ++ LL++ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLENQADVNIEDNEGNLPLHLA 110
Query: 921 CKKNRIKVVELLLKHGASS 939
K+ ++VVE L+KH AS+
Sbjct: 111 AKEGHLRVVEFLVKHTASN 129
Score = 34.7 bits (78), Expect = 0.34, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 39/78 (50%)
Query: 234 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 293
++ LL GA+ + ++H A + + ++ LL++ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLENQADVNIEDNEGNLPLHLA 110
Query: 294 CKKNRIKVVELLLKHGAS 311
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 34.7 bits (78), Expect = 0.34, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 39/78 (50%)
Query: 267 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 326
++ LL GA+ + ++H A + + ++ LL++ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLENQADVNIEDNEGNLPLHLA 110
Query: 327 CKKNRIKVVELLLKHGAS 344
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 34.7 bits (78), Expect = 0.34, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 39/78 (50%)
Query: 300 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 359
++ LL GA+ + ++H A + + ++ LL++ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLENQADVNIEDNEGNLPLHLA 110
Query: 360 CKKNRIKVVELLLKHGAS 377
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 34.7 bits (78), Expect = 0.34, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 39/78 (50%)
Query: 333 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 392
++ LL GA+ + ++H A + + ++ LL++ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLENQADVNIEDNEGNLPLHLA 110
Query: 393 CKKNRIKVVELLLKHGAS 410
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 34.7 bits (78), Expect = 0.34, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 39/78 (50%)
Query: 366 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 425
++ LL GA+ + ++H A + + ++ LL++ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLENQADVNIEDNEGNLPLHLA 110
Query: 426 CKKNRIKVVELLLKHGAS 443
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 34.7 bits (78), Expect = 0.34, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 39/78 (50%)
Query: 399 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 458
++ LL GA+ + ++H A + + ++ LL++ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLENQADVNIEDNEGNLPLHLA 110
Query: 459 CKKNRIKVVELLLKHGAS 476
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 34.7 bits (78), Expect = 0.34, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 39/78 (50%)
Query: 432 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 491
++ LL GA+ + ++H A + + ++ LL++ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLENQADVNIEDNEGNLPLHLA 110
Query: 492 CKKNRIKVVELLLKHGAS 509
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 34.7 bits (78), Expect = 0.34, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 39/78 (50%)
Query: 465 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 524
++ LL GA+ + ++H A + + ++ LL++ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLENQADVNIEDNEGNLPLHLA 110
Query: 525 CKKNRIKVVELLLKHGAS 542
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 34.7 bits (78), Expect = 0.34, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 39/78 (50%)
Query: 498 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 557
++ LL GA+ + ++H A + + ++ LL++ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLENQADVNIEDNEGNLPLHLA 110
Query: 558 CKKNRIKVVELLLKHGAS 575
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 34.7 bits (78), Expect = 0.34, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 39/78 (50%)
Query: 531 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 590
++ LL GA+ + ++H A + + ++ LL++ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLENQADVNIEDNEGNLPLHLA 110
Query: 591 CKKNRIKVVELLLKHGAS 608
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 34.7 bits (78), Expect = 0.34, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 39/78 (50%)
Query: 564 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 623
++ LL GA+ + ++H A + + ++ LL++ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLENQADVNIEDNEGNLPLHLA 110
Query: 624 CKKNRIKVVELLLKHGAS 641
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 34.7 bits (78), Expect = 0.34, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 39/78 (50%)
Query: 597 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 656
++ LL GA+ + ++H A + + ++ LL++ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLENQADVNIEDNEGNLPLHLA 110
Query: 657 CKKNRIKVVELLLKHGAS 674
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 34.7 bits (78), Expect = 0.34, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 39/78 (50%)
Query: 630 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 689
++ LL GA+ + ++H A + + ++ LL++ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLENQADVNIEDNEGNLPLHLA 110
Query: 690 CKKNRIKVVELLLKHGAS 707
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 34.7 bits (78), Expect = 0.34, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 39/78 (50%)
Query: 663 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 722
++ LL GA+ + ++H A + + ++ LL++ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLENQADVNIEDNEGNLPLHLA 110
Query: 723 CKKNRIKVVELLLKHGAS 740
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 34.7 bits (78), Expect = 0.34, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 39/78 (50%)
Query: 696 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 755
++ LL GA+ + ++H A + + ++ LL++ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLENQADVNIEDNEGNLPLHLA 110
Query: 756 CKKNRIKVVELLLKHGAS 773
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 34.7 bits (78), Expect = 0.34, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 39/78 (50%)
Query: 729 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 788
++ LL GA+ + ++H A + + ++ LL++ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLENQADVNIEDNEGNLPLHLA 110
Query: 789 CKKNRIKVVELLLKHGAS 806
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 34.7 bits (78), Expect = 0.34, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 39/78 (50%)
Query: 762 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 821
++ LL GA+ + ++H A + + ++ LL++ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLENQADVNIEDNEGNLPLHLA 110
Query: 822 CKKNRIKVVELLLKHGAS 839
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 34.7 bits (78), Expect = 0.34, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 39/78 (50%)
Query: 795 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 854
++ LL GA+ + ++H A + + ++ LL++ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLENQADVNIEDNEGNLPLHLA 110
Query: 855 CKKNRIKVVELLLKHGAS 872
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
>pdb|1MX4|A Chain A, Structure Of P18ink4c (F82q)
pdb|1MX4|B Chain B, Structure Of P18ink4c (F82q)
Length = 168
Score = 55.8 bits (133), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/106 (36%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
Query: 1116 DIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLC 1175
+IA LL GA P+ + GF +H +A G D LLE ADV+ G PLHL
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGQLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 1176 AQEDRVGVAELLLKNNA-QVDTPTKKGFTPLHIACHYGQISMARLL 1220
A+E + V E L+K+ A V KG T +A YG+ + L+
Sbjct: 111 AKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLM 156
Score = 55.8 bits (133), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/116 (32%), Positives = 55/116 (47%), Gaps = 1/116 (0%)
Query: 999 RLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFT 1058
+LGN +I LL GA D + + +H AA+ GQ + LLE A + +G
Sbjct: 46 KLGNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGQLDTLQTLLEFQADVNIEDNEGNL 105
Query: 1059 PLHLTGKYGHIKVAKLLLQKDAP-VDFQGKNGVTPLHVASHYDHQNVALLLLEKGA 1113
PLHL K GH++V + L++ A V + G T +A Y V L+ GA
Sbjct: 106 PLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGA 161
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 1301 GHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTP 1360
G+ I LL RGA+P+ ++T GF +H A GQ+ + LL+ A+V+ ++G P
Sbjct: 48 GNPEIARRLLLRGANPDLKDRT-GFAVIHDAARAGQLDTLQTLLEFQADVNIEDNEGNLP 106
Query: 1361 LHHSAQQGHSTIVALLLDRGAS 1382
LH +A++GH +V L+ AS
Sbjct: 107 LHLAAKEGHLRVVEFLVKHTAS 128
Score = 48.9 bits (115), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 189 TALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEA 248
TAL V G+ +A+ LL + A+P+ + GF +H A + ++ ++ LL+ A +
Sbjct: 40 TALQVMK-LGNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGQLDTLQTLLEFQADVNI 98
Query: 249 TTEVREPMLHIACKKNRIKVVELLLKHGAS 278
LH+A K+ ++VVE L+KH AS
Sbjct: 99 EDNEGNLPLHLAAKEGHLRVVEFLVKHTAS 128
Score = 43.9 bits (102), Expect = 7e-04, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Query: 1025 TALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDF 1084
TAL + K G E+A LL GA+ + GF +H + G + + LL+ A V+
Sbjct: 40 TALQVM-KLGNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGQLDTLQTLLEFQADVNI 98
Query: 1085 QGKNGVTPLHVASHYDHQNVALLLLEKGAS 1114
+ G PLH+A+ H V L++ AS
Sbjct: 99 EDNEGNLPLHLAAKEGHLRVVEFLVKHTAS 128
Score = 42.0 bits (97), Expect = 0.003, Method: Composition-based stats.
Identities = 38/140 (27%), Positives = 59/140 (42%), Gaps = 27/140 (19%)
Query: 1183 VAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRXXXXXX 1242
+A LL A D + GF +H A GQ+ + LL+ A+V + N
Sbjct: 52 IARRLLLRGANPDLKDRTGFAVIHDAARAGQLDTLQTLLEFQADVNIEDN---------- 101
Query: 1243 XXXXXXXXYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASP--NATNKGFTPLHHSAQQ 1300
+G PLH +A++GH +V L+ AS + +KG T +
Sbjct: 102 --------------EGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLY 147
Query: 1301 GHSTIVALLLDRGASPNATN 1320
G + +V+L+ GA ATN
Sbjct: 148 GRNEVVSLMQANGAG-GATN 166
Score = 40.8 bits (94), Expect = 0.006, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 1258 GFTPLHHSAQQGHSTIVALLLDRGASPN-ATNKGFTPLHHSAQQGHSTIVALLLDRGASP 1316
GF +H +A+ G + LL+ A N N+G PLH +A++GH +V L+ AS
Sbjct: 70 GFAVIHDAARAGQLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASN 129
Query: 1317 NATNKTRGFTPLHIACHYGQISMARLL 1343
+G T +A YG+ + L+
Sbjct: 130 VGHRNHKGDTACDLARLYGRNEVVSLM 156
Score = 40.0 bits (92), Expect = 0.009, Method: Composition-based stats.
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 1/113 (0%)
Query: 964 ILRLATCDVLPQCETRLNFSNLRVREQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDL 1023
+++L ++ + R +L+ R +H A+R G +D + LL+ A V+ +
Sbjct: 44 VMKLGNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGQLDTLQTLLEFQADVNIEDNEG 103
Query: 1024 YTALHIAAKEGQEEVAAVLLENGAS-LTSTTKKGFTPLHLTGKYGHIKVAKLL 1075
LH+AAKEG V L+++ AS + KG T L YG +V L+
Sbjct: 104 NLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLM 156
Score = 40.0 bits (92), Expect = 0.010, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 42 KWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISSKTKVRGF 101
K G + LL RGAN D K R G +H AAR+G ++ LLE A ++ +
Sbjct: 46 KLGNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGQLDTLQTLLEFQADVNIEDNEGNL 105
Query: 102 YI---LRSGHEAVIEMLLEQGA 120
+ + GH V+E L++ A
Sbjct: 106 PLHLAAKEGHLRVVEFLVKHTA 127
Score = 35.8 bits (81), Expect = 0.17, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 40/79 (50%)
Query: 861 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 920
++ LL GA+ + ++H A + ++ ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGQLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 921 CKKNRIKVVELLLKHGASS 939
K+ ++VVE L+KH AS+
Sbjct: 111 AKEGHLRVVEFLVKHTASN 129
Score = 35.8 bits (81), Expect = 0.17, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 54/122 (44%), Gaps = 15/122 (12%)
Query: 127 KVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPV---DFQGKAPVDDV 183
++A LL GA+ + GF +H + G + + LL+ A V D +G P
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGQLDTLQTLLEFQADVNIEDNEGNLP---- 106
Query: 184 TVDYLTALHVAAHCGHARVAKTLLDKKA-DPNARALNGFTPLHIACKKNRIKVVELLLKH 242
LH+AA GH RV + L+ A + R G T +A R +VV L+ +
Sbjct: 107 -------LHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQAN 159
Query: 243 GA 244
GA
Sbjct: 160 GA 161
Score = 35.4 bits (80), Expect = 0.20, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 39/78 (50%)
Query: 234 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 293
++ LL GA+ + ++H A + ++ ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGQLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 294 CKKNRIKVVELLLKHGAS 311
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 35.4 bits (80), Expect = 0.20, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 39/78 (50%)
Query: 267 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 326
++ LL GA+ + ++H A + ++ ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGQLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 327 CKKNRIKVVELLLKHGAS 344
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 35.4 bits (80), Expect = 0.20, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 39/78 (50%)
Query: 300 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 359
++ LL GA+ + ++H A + ++ ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGQLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 360 CKKNRIKVVELLLKHGAS 377
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 35.4 bits (80), Expect = 0.20, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 39/78 (50%)
Query: 333 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 392
++ LL GA+ + ++H A + ++ ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGQLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 393 CKKNRIKVVELLLKHGAS 410
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 35.4 bits (80), Expect = 0.20, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 39/78 (50%)
Query: 366 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 425
++ LL GA+ + ++H A + ++ ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGQLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 426 CKKNRIKVVELLLKHGAS 443
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 35.4 bits (80), Expect = 0.20, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 39/78 (50%)
Query: 399 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 458
++ LL GA+ + ++H A + ++ ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGQLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 459 CKKNRIKVVELLLKHGAS 476
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 35.4 bits (80), Expect = 0.20, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 39/78 (50%)
Query: 432 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 491
++ LL GA+ + ++H A + ++ ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGQLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 492 CKKNRIKVVELLLKHGAS 509
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 35.4 bits (80), Expect = 0.20, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 39/78 (50%)
Query: 465 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 524
++ LL GA+ + ++H A + ++ ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGQLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 525 CKKNRIKVVELLLKHGAS 542
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 35.4 bits (80), Expect = 0.20, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 39/78 (50%)
Query: 498 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 557
++ LL GA+ + ++H A + ++ ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGQLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 558 CKKNRIKVVELLLKHGAS 575
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 35.4 bits (80), Expect = 0.20, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 39/78 (50%)
Query: 531 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 590
++ LL GA+ + ++H A + ++ ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGQLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 591 CKKNRIKVVELLLKHGAS 608
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 35.4 bits (80), Expect = 0.20, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 39/78 (50%)
Query: 564 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 623
++ LL GA+ + ++H A + ++ ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGQLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 624 CKKNRIKVVELLLKHGAS 641
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 35.4 bits (80), Expect = 0.20, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 39/78 (50%)
Query: 597 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 656
++ LL GA+ + ++H A + ++ ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGQLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 657 CKKNRIKVVELLLKHGAS 674
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 35.4 bits (80), Expect = 0.20, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 39/78 (50%)
Query: 630 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 689
++ LL GA+ + ++H A + ++ ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGQLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 690 CKKNRIKVVELLLKHGAS 707
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 35.4 bits (80), Expect = 0.20, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 39/78 (50%)
Query: 663 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 722
++ LL GA+ + ++H A + ++ ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGQLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 723 CKKNRIKVVELLLKHGAS 740
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 35.4 bits (80), Expect = 0.20, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 39/78 (50%)
Query: 696 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 755
++ LL GA+ + ++H A + ++ ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGQLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 756 CKKNRIKVVELLLKHGAS 773
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 35.4 bits (80), Expect = 0.20, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 39/78 (50%)
Query: 729 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 788
++ LL GA+ + ++H A + ++ ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGQLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 789 CKKNRIKVVELLLKHGAS 806
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 35.4 bits (80), Expect = 0.20, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 39/78 (50%)
Query: 762 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 821
++ LL GA+ + ++H A + ++ ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGQLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 822 CKKNRIKVVELLLKHGAS 839
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 35.4 bits (80), Expect = 0.20, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 39/78 (50%)
Query: 795 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 854
++ LL GA+ + ++H A + ++ ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGQLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 855 CKKNRIKVVELLLKHGAS 872
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
>pdb|2RFM|A Chain A, Structure Of A Thermophilic Ankyrin Repeat Protein
pdb|2RFM|B Chain B, Structure Of A Thermophilic Ankyrin Repeat Protein
Length = 192
Score = 55.8 bits (133), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/132 (30%), Positives = 67/132 (50%)
Query: 984 NLRVREQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLL 1043
N R +TPL +A LG + + L+++ ++ + TAL A K + +A LL
Sbjct: 29 NYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLL 88
Query: 1044 ENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQN 1103
G+++ + G TPL + +G+ +++ LL+ A V+ + G TPL VAS Y
Sbjct: 89 SKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSE 148
Query: 1104 VALLLLEKGASM 1115
+ LLE GA +
Sbjct: 149 IVKKLLELGADI 160
Score = 54.3 bits (129), Expect = 5e-07, Method: Composition-based stats.
Identities = 45/152 (29%), Positives = 72/152 (47%), Gaps = 15/152 (9%)
Query: 1021 KDLY--TALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQK 1078
+D Y T L +A G E L+EN L +G T L K + +A+ LL K
Sbjct: 31 RDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSK 90
Query: 1079 DAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTP 1138
+ V+ + +G TPL + + + ++ LLE GA++ N ++ G TP
Sbjct: 91 GSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANV-------------NDRNLEGETP 137
Query: 1139 LHLSASEGHADMSAMLLEHGADVSHAAKNGLT 1170
L +++ G +++ LLE GAD+S GLT
Sbjct: 138 LIVASKYGRSEIVKKLLELGADISARDLTGLT 169
Score = 54.3 bits (129), Expect = 5e-07, Method: Composition-based stats.
Identities = 34/101 (33%), Positives = 52/101 (51%)
Query: 1103 NVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVS 1162
+ AL+ K + IA LL G+ N + +G TPL S G+++MS LLEHGA+V+
Sbjct: 69 STALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVN 128
Query: 1163 HAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFT 1203
G TPL + ++ R + + LL+ A + G T
Sbjct: 129 DRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLT 169
Score = 51.2 bits (121), Expect = 4e-06, Method: Composition-based stats.
Identities = 39/141 (27%), Positives = 70/141 (49%), Gaps = 14/141 (9%)
Query: 32 HNITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAP 91
+N TPL VA G N + L+ +++K +G TAL A ++ + E LL +G+
Sbjct: 34 YNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSN 93
Query: 92 ISSKTKVRGFYILRSGHEAVIEMLLEQGAPISSKTKVAAVLLENGASLTSTTKKGFTPLH 151
+++K SG ++ + I ++++ LLE+GA++ +G TPL
Sbjct: 94 VNTKD--------FSGKTPLMWSI------IFGYSEMSYFLLEHGANVNDRNLEGETPLI 139
Query: 152 LTGKYGHIKVAKLLLQKDAPV 172
+ KYG ++ K LL+ A +
Sbjct: 140 VASKYGRSEIVKKLLELGADI 160
Score = 47.4 bits (111), Expect = 6e-05, Method: Composition-based stats.
Identities = 42/152 (27%), Positives = 66/152 (43%), Gaps = 24/152 (15%)
Query: 1137 TPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDT 1196
TPL ++ G + L+E+ + G T L + +R+G+AE LL + V+T
Sbjct: 37 TPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNT 96
Query: 1197 PTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRXXXXXXXXXXXXXXYTNTTD 1256
G TPL + +G M+ LL+ ANV +N
Sbjct: 97 KDFSGKTPLMWSIIFGYSEMSYFLLEHGANVN-DRNL----------------------- 132
Query: 1257 QGFTPLHHSAQQGHSTIVALLLDRGASPNATN 1288
+G TPL +++ G S IV LL+ GA +A +
Sbjct: 133 EGETPLIVASKYGRSEIVKKLLELGADISARD 164
Score = 46.2 bits (108), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 2/104 (1%)
Query: 1257 QGFTPLHHSAQQGHSTIVALLLDRGASPNATN-KGFTPLHHSAQQGHSTIVALLLDRGAS 1315
+G T L + + I LL +G++ N + G TPL S G+S + LL+ GA+
Sbjct: 67 EGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGAN 126
Query: 1316 PNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFT 1359
N N G TPL +A YG+ + + LL+ A++S G T
Sbjct: 127 VNDRN-LEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLT 169
Score = 44.7 bits (104), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Query: 1289 KGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSA 1348
+G T L + + I LL +G++ N T G TPL + +G M+ LL+ A
Sbjct: 67 EGSTALIWAVKNNRLGIAEKLLSKGSNVN-TKDFSGKTPLMWSIIFGYSEMSYFLLEHGA 125
Query: 1349 NVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATN 1387
NV+ +G TPL +++ G S IV LL+ GA +A +
Sbjct: 126 NVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARD 164
Score = 44.7 bits (104), Expect = 4e-04, Method: Composition-based stats.
Identities = 38/132 (28%), Positives = 60/132 (45%), Gaps = 2/132 (1%)
Query: 981 NFSNLRVR--EQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEV 1038
NF L + E T L A + + I LL G+ V++ T L + G E+
Sbjct: 57 NFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEM 116
Query: 1039 AAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASH 1098
+ LLE+GA++ +G TPL + KYG ++ K LL+ A + + G+T A
Sbjct: 117 SYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARI 176
Query: 1099 YDHQNVALLLLE 1110
+ Q V + E
Sbjct: 177 FGRQEVIKIFTE 188
Score = 44.3 bits (103), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 37/61 (60%)
Query: 35 TPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISS 94
TPL + +G + M LL GAN++++ +G T L A++ G +++ LLE GA IS+
Sbjct: 103 TPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISA 162
Query: 95 K 95
+
Sbjct: 163 R 163
Score = 42.4 bits (98), Expect = 0.002, Method: Composition-based stats.
Identities = 31/102 (30%), Positives = 52/102 (50%)
Query: 180 VDDVTVDYLTALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELL 239
++D ++ TAL A +A+ LL K ++ N + +G TPL + ++ L
Sbjct: 61 LEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFL 120
Query: 240 LKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEA 281
L+HGA++ E L +A K R ++V+ LL+ GA I A
Sbjct: 121 LEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISA 162
Score = 41.6 bits (96), Expect = 0.003, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 8/100 (8%)
Query: 123 SSKTKVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKAPVDD 182
+++ +A LL G+++ + G TPL + +G+ +++ LL+ A V+D
Sbjct: 78 NNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHG--------ANVND 129
Query: 183 VTVDYLTALHVAAHCGHARVAKTLLDKKADPNARALNGFT 222
++ T L VA+ G + + K LL+ AD +AR L G T
Sbjct: 130 RNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLT 169
Score = 41.2 bits (95), Expect = 0.004, Method: Composition-based stats.
Identities = 34/126 (26%), Positives = 58/126 (46%)
Query: 222 TPLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEA 281
TPL +AC ++ L+++ +E L A K NR+ + E LL G+++
Sbjct: 37 TPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNT 96
Query: 282 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 341
+ L + ++ LL+HGA++ E L +A K R ++V+ LL+
Sbjct: 97 KDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLEL 156
Query: 342 GASIEA 347
GA I A
Sbjct: 157 GADISA 162
Score = 40.8 bits (94), Expect = 0.005, Method: Composition-based stats.
Identities = 35/126 (27%), Positives = 56/126 (44%)
Query: 189 TALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEA 248
T L VA G L++ + + G T L A K NR+ + E LL G+++
Sbjct: 37 TPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNT 96
Query: 249 TTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH 308
+ L + ++ LL+HGA++ E L +A K R ++V+ LL+
Sbjct: 97 KDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLEL 156
Query: 309 GASIEA 314
GA I A
Sbjct: 157 GADISA 162
Score = 39.7 bits (91), Expect = 0.012, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 35 TPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLE 87
TPL VA+K+G++ +V LL GA+I + GLTA A G + VI++ E
Sbjct: 136 TPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIFTE 188
Score = 38.5 bits (88), Expect = 0.030, Method: Composition-based stats.
Identities = 46/198 (23%), Positives = 76/198 (38%), Gaps = 45/198 (22%)
Query: 880 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASS 939
R P++ +AC ++ L+++ +E L A K NR+ + E LL G
Sbjct: 36 RTPLM-VACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKG--- 91
Query: 940 HVVSCYSNVKVHVSLNKIQDVSSSILRLATCDVLPQCETRLNFSNLRVREQQTPLHIASR 999
SNV +FS +TPL +
Sbjct: 92 ------SNVNTK-----------------------------DFSG------KTPLMWSII 110
Query: 1000 LGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTP 1059
G ++ LL+HGA V+ + T L +A+K G+ E+ LLE GA +++ G T
Sbjct: 111 FGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTA 170
Query: 1060 LHLTGKYGHIKVAKLLLQ 1077
+G +V K+ +
Sbjct: 171 EASARIFGRQEVIKIFTE 188
Score = 37.4 bits (85), Expect = 0.056, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 1/128 (0%)
Query: 253 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 312
R P++ +AC ++ L+++ +E L A K NR+ + E LL G+++
Sbjct: 36 RTPLM-VACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNV 94
Query: 313 EATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLL 372
+ L + ++ LL+HGA++ E L +A K R ++V+ LL
Sbjct: 95 NTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLL 154
Query: 373 KHGASIEA 380
+ GA I A
Sbjct: 155 ELGADISA 162
Score = 37.4 bits (85), Expect = 0.056, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 1/128 (0%)
Query: 286 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 345
R P++ +AC ++ L+++ +E L A K NR+ + E LL G+++
Sbjct: 36 RTPLM-VACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNV 94
Query: 346 EATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLL 405
+ L + ++ LL+HGA++ E L +A K R ++V+ LL
Sbjct: 95 NTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLL 154
Query: 406 KHGASIEA 413
+ GA I A
Sbjct: 155 ELGADISA 162
Score = 37.4 bits (85), Expect = 0.056, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 1/128 (0%)
Query: 319 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 378
R P++ +AC ++ L+++ +E L A K NR+ + E LL G+++
Sbjct: 36 RTPLM-VACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNV 94
Query: 379 EATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLL 438
+ L + ++ LL+HGA++ E L +A K R ++V+ LL
Sbjct: 95 NTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLL 154
Query: 439 KHGASIEA 446
+ GA I A
Sbjct: 155 ELGADISA 162
Score = 37.4 bits (85), Expect = 0.056, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 1/128 (0%)
Query: 352 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 411
R P++ +AC ++ L+++ +E L A K NR+ + E LL G+++
Sbjct: 36 RTPLM-VACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNV 94
Query: 412 EATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLL 471
+ L + ++ LL+HGA++ E L +A K R ++V+ LL
Sbjct: 95 NTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLL 154
Query: 472 KHGASIEA 479
+ GA I A
Sbjct: 155 ELGADISA 162
Score = 37.4 bits (85), Expect = 0.056, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 1/128 (0%)
Query: 385 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 444
R P++ +AC ++ L+++ +E L A K NR+ + E LL G+++
Sbjct: 36 RTPLM-VACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNV 94
Query: 445 EATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLL 504
+ L + ++ LL+HGA++ E L +A K R ++V+ LL
Sbjct: 95 NTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLL 154
Query: 505 KHGASIEA 512
+ GA I A
Sbjct: 155 ELGADISA 162
Score = 37.4 bits (85), Expect = 0.056, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 1/128 (0%)
Query: 418 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 477
R P++ +AC ++ L+++ +E L A K NR+ + E LL G+++
Sbjct: 36 RTPLM-VACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNV 94
Query: 478 EATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLL 537
+ L + ++ LL+HGA++ E L +A K R ++V+ LL
Sbjct: 95 NTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLL 154
Query: 538 KHGASIEA 545
+ GA I A
Sbjct: 155 ELGADISA 162
Score = 37.4 bits (85), Expect = 0.056, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 1/128 (0%)
Query: 451 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 510
R P++ +AC ++ L+++ +E L A K NR+ + E LL G+++
Sbjct: 36 RTPLM-VACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNV 94
Query: 511 EATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLL 570
+ L + ++ LL+HGA++ E L +A K R ++V+ LL
Sbjct: 95 NTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLL 154
Query: 571 KHGASIEA 578
+ GA I A
Sbjct: 155 ELGADISA 162
Score = 37.4 bits (85), Expect = 0.056, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 1/128 (0%)
Query: 484 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 543
R P++ +AC ++ L+++ +E L A K NR+ + E LL G+++
Sbjct: 36 RTPLM-VACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNV 94
Query: 544 EATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLL 603
+ L + ++ LL+HGA++ E L +A K R ++V+ LL
Sbjct: 95 NTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLL 154
Query: 604 KHGASIEA 611
+ GA I A
Sbjct: 155 ELGADISA 162
Score = 37.4 bits (85), Expect = 0.056, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 1/128 (0%)
Query: 517 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 576
R P++ +AC ++ L+++ +E L A K NR+ + E LL G+++
Sbjct: 36 RTPLM-VACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNV 94
Query: 577 EATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLL 636
+ L + ++ LL+HGA++ E L +A K R ++V+ LL
Sbjct: 95 NTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLL 154
Query: 637 KHGASIEA 644
+ GA I A
Sbjct: 155 ELGADISA 162
Score = 37.4 bits (85), Expect = 0.056, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 1/128 (0%)
Query: 550 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 609
R P++ +AC ++ L+++ +E L A K NR+ + E LL G+++
Sbjct: 36 RTPLM-VACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNV 94
Query: 610 EATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLL 669
+ L + ++ LL+HGA++ E L +A K R ++V+ LL
Sbjct: 95 NTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLL 154
Query: 670 KHGASIEA 677
+ GA I A
Sbjct: 155 ELGADISA 162
Score = 37.4 bits (85), Expect = 0.056, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 1/128 (0%)
Query: 583 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 642
R P++ +AC ++ L+++ +E L A K NR+ + E LL G+++
Sbjct: 36 RTPLM-VACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNV 94
Query: 643 EATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLL 702
+ L + ++ LL+HGA++ E L +A K R ++V+ LL
Sbjct: 95 NTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLL 154
Query: 703 KHGASIEA 710
+ GA I A
Sbjct: 155 ELGADISA 162
Score = 37.4 bits (85), Expect = 0.056, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 1/128 (0%)
Query: 616 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 675
R P++ +AC ++ L+++ +E L A K NR+ + E LL G+++
Sbjct: 36 RTPLM-VACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNV 94
Query: 676 EATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLL 735
+ L + ++ LL+HGA++ E L +A K R ++V+ LL
Sbjct: 95 NTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLL 154
Query: 736 KHGASIEA 743
+ GA I A
Sbjct: 155 ELGADISA 162
Score = 37.4 bits (85), Expect = 0.056, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 1/128 (0%)
Query: 649 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 708
R P++ +AC ++ L+++ +E L A K NR+ + E LL G+++
Sbjct: 36 RTPLM-VACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNV 94
Query: 709 EATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLL 768
+ L + ++ LL+HGA++ E L +A K R ++V+ LL
Sbjct: 95 NTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLL 154
Query: 769 KHGASIEA 776
+ GA I A
Sbjct: 155 ELGADISA 162
Score = 37.4 bits (85), Expect = 0.056, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 1/128 (0%)
Query: 682 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 741
R P++ +AC ++ L+++ +E L A K NR+ + E LL G+++
Sbjct: 36 RTPLM-VACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNV 94
Query: 742 EATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLL 801
+ L + ++ LL+HGA++ E L +A K R ++V+ LL
Sbjct: 95 NTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLL 154
Query: 802 KHGASIEA 809
+ GA I A
Sbjct: 155 ELGADISA 162
Score = 37.4 bits (85), Expect = 0.056, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 1/128 (0%)
Query: 715 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 774
R P++ +AC ++ L+++ +E L A K NR+ + E LL G+++
Sbjct: 36 RTPLM-VACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNV 94
Query: 775 EATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLL 834
+ L + ++ LL+HGA++ E L +A K R ++V+ LL
Sbjct: 95 NTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLL 154
Query: 835 KHGASIEA 842
+ GA I A
Sbjct: 155 ELGADISA 162
Score = 37.4 bits (85), Expect = 0.056, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 1/128 (0%)
Query: 748 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 807
R P++ +AC ++ L+++ +E L A K NR+ + E LL G+++
Sbjct: 36 RTPLM-VACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNV 94
Query: 808 EATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLL 867
+ L + ++ LL+HGA++ E L +A K R ++V+ LL
Sbjct: 95 NTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLL 154
Query: 868 KHGASIEA 875
+ GA I A
Sbjct: 155 ELGADISA 162
Score = 37.4 bits (85), Expect = 0.056, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 1/128 (0%)
Query: 781 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 840
R P++ +AC ++ L+++ +E L A K NR+ + E LL G+++
Sbjct: 36 RTPLM-VACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNV 94
Query: 841 EATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLL 900
+ L + ++ LL+HGA++ E L +A K R ++V+ LL
Sbjct: 95 NTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLL 154
Query: 901 KHGASIEA 908
+ GA I A
Sbjct: 155 ELGADISA 162
Score = 34.3 bits (77), Expect = 0.49, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Query: 814 REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASI 873
R P++ +AC ++ L+++ +E L A K NR+ + E LL G+++
Sbjct: 36 RTPLM-VACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNV 94
Query: 874 EATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLL 933
+ L + ++ LL+HGA++ E L +A K R ++V+ LL
Sbjct: 95 NTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLL 154
Query: 934 KHGA 937
+ GA
Sbjct: 155 ELGA 158
>pdb|3V30|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The
Ankyrin Repeat Domains Of Human Rfxank
Length = 172
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 47/170 (27%), Positives = 74/170 (43%), Gaps = 26/170 (15%)
Query: 1167 NGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSAN 1226
+ L+ L AQ + + E L K + V+ P ++GFTPL A +G+I R LL+ A+
Sbjct: 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGAD 61
Query: 1227 VTVPKNFPSRXXXXXXXXXXXXXXYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNA 1286
+ + + L ++ G++ IV LLL+R N
Sbjct: 62 PHI------------------------LAKERESALSLASTGGYTDIVGLLLERDVDINI 97
Query: 1287 TN-KGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYG 1335
+ G TPL ++ + H V LL RGA T G+TP+ +A G
Sbjct: 98 YDWNGGTPLLYAVRGNHVKCVEALLARGADL-TTEADSGYTPMDLAVALG 146
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 43/154 (27%), Positives = 69/154 (44%), Gaps = 14/154 (9%)
Query: 1060 LHLTGKYGHIKVAKLLLQK-DAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIA 1118
+H G + K L+K D V+ + G TPL AS + ++
Sbjct: 6 IHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAF-------------GEIETV 52
Query: 1119 TTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQE 1178
LLE+GA P+ + + L L+++ G+ D+ +LLE D++ NG TPL +
Sbjct: 53 RFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRG 112
Query: 1179 DRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYG 1212
+ V E LL A + T G+TP+ +A G
Sbjct: 113 NHVKCVEALLARGADLTTEADSGYTPMDLAVALG 146
Score = 53.9 bits (128), Expect = 6e-07, Method: Composition-based stats.
Identities = 43/148 (29%), Positives = 67/148 (45%), Gaps = 4/148 (2%)
Query: 961 SSSILRLATCDVLPQCETRL----NFSNLRVREQQTPLHIASRLGNVDIVMLLLQHGAAV 1016
S SI +LA L Q + L N N TPL AS G ++ V LL+ GA
Sbjct: 3 SLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADP 62
Query: 1017 DSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLL 1076
K+ +AL +A+ G ++ +LLE + G TPL + H+K + LL
Sbjct: 63 HILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALL 122
Query: 1077 QKDAPVDFQGKNGVTPLHVASHYDHQNV 1104
+ A + + +G TP+ +A ++ V
Sbjct: 123 ARGADLTTEADSGYTPMDLAVALGYRKV 150
Score = 51.2 bits (121), Expect = 4e-06, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 58/118 (49%), Gaps = 2/118 (1%)
Query: 1256 DQGFTPLHHSAQQGHSTIVALLLDRGASPNATNKGF-TPLHHSAQQGHSTIVALLLDRGA 1314
++GFTPL ++ G V LL+ GA P+ K + L ++ G++ IV LLL+R
Sbjct: 34 ERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDV 93
Query: 1315 SPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTI 1372
N + G TPL A + LL + A+++ D G+TP+ + G+ +
Sbjct: 94 DINIYDWNGG-TPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKV 150
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 36/134 (26%), Positives = 60/134 (44%), Gaps = 13/134 (9%)
Query: 1024 YTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVD 1083
+T L A+ G+ E LLE GA K+ + L L G+ + LLL++D ++
Sbjct: 37 FTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDIN 96
Query: 1084 FQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSA 1143
NG TPL A +H LL +GA + E+ +G+TP+ L+
Sbjct: 97 IYDWNGGTPLLYAVRGNHVKCVEALLARGADL-------------TTEADSGYTPMDLAV 143
Query: 1144 SEGHADMSAMLLEH 1157
+ G+ + ++ H
Sbjct: 144 ALGYRKVQQVIENH 157
Score = 47.8 bits (112), Expect = 4e-05, Method: Composition-based stats.
Identities = 40/124 (32%), Positives = 58/124 (46%), Gaps = 7/124 (5%)
Query: 1262 LHHSAQQGHSTIVALLLDRGASPNATNK----GFTPLHHSAQQGHSTIVALLLDRGASPN 1317
+H A QG + L +G N NK GFTPL ++ G V LL+ GA P+
Sbjct: 6 IHQLAAQGELDQLKEHLRKG--DNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPH 63
Query: 1318 ATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLL 1377
K R + L +A G + LLL++ +++ G TPL ++ + H V LL
Sbjct: 64 ILAKERE-SALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALL 122
Query: 1378 DRGA 1381
RGA
Sbjct: 123 ARGA 126
Score = 45.4 bits (106), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/138 (26%), Positives = 61/138 (44%), Gaps = 20/138 (14%)
Query: 31 QHNITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGA 90
+ TPL A+ +G+ V LL GA+ ++ +AL A+ G+ ++ +LLE+
Sbjct: 34 ERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDV 93
Query: 91 PISSKTKVRG---FYILRSGHEAVIEMLLEQGAPISSKTKVAAVLLENGASLTSTTKKGF 147
I+ G Y +R H +E LL + GA LT+ G+
Sbjct: 94 DINIYDWNGGTPLLYAVRGNHVKCVEALLAR-----------------GADLTTEADSGY 136
Query: 148 TPLHLTGKYGHIKVAKLL 165
TP+ L G+ KV +++
Sbjct: 137 TPMDLAVALGYRKVQQVI 154
Score = 44.7 bits (104), Expect = 3e-04, Method: Composition-based stats.
Identities = 42/144 (29%), Positives = 62/144 (43%), Gaps = 8/144 (5%)
Query: 199 HARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVREPMLH 258
H R L++K P+ R GFTPL A I+ V LL+ GA + RE L
Sbjct: 21 HLRKGDNLVNK---PDER---GFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALS 74
Query: 259 IACKKNRIKVVELLLKHGASIEATT-EVREPMLHIACKKNRIKVVELLLKHGASIEATTE 317
+A +V LLL+ I P+L+ A + N +K VE LL GA + +
Sbjct: 75 LASTGGYTDIVGLLLERDVDINIYDWNGGTPLLY-AVRGNHVKCVEALLARGADLTTEAD 133
Query: 318 VREPMLHIACKKNRIKVVELLLKH 341
+ +A KV +++ H
Sbjct: 134 SGYTPMDLAVALGYRKVQQVIENH 157
Score = 44.3 bits (103), Expect = 5e-04, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 45/88 (51%)
Query: 988 REQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGA 1047
+E+++ L +AS G DIV LLL+ ++ + T L A + + LL GA
Sbjct: 67 KERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGA 126
Query: 1048 SLTSTTKKGFTPLHLTGKYGHIKVAKLL 1075
LT+ G+TP+ L G+ KV +++
Sbjct: 127 DLTTEADSGYTPMDLAVALGYRKVQQVI 154
Score = 43.1 bits (100), Expect = 0.001, Method: Composition-based stats.
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Query: 1294 LHHSAQQGHSTIVALLLDRGASPNATNK--TRGFTPLHIACHYGQISMARLLLDQSANVS 1351
+H A QG + L +G N NK RGFTPL A +G+I R LL+ A+
Sbjct: 6 IHQLAAQGELDQLKEHLRKG--DNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPH 63
Query: 1352 CTTDQGFTPLHHSAQQGHSTIVALLLDRGASPN 1384
+ + L ++ G++ IV LLL+R N
Sbjct: 64 ILAKERESALSLASTGGYTDIVGLLLERDVDIN 96
Score = 40.0 bits (92), Expect = 0.009, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 43/94 (45%)
Query: 1135 GFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQV 1194
GFTPL +++ G + LLE GAD AK + L L + + LLL+ + +
Sbjct: 36 GFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDI 95
Query: 1195 DTPTKKGFTPLHIACHYGQISMARLLLDQSANVT 1228
+ G TPL A + LL + A++T
Sbjct: 96 NIYDWNGGTPLLYAVRGNHVKCVEALLARGADLT 129
Score = 36.2 bits (82), Expect = 0.12, Method: Composition-based stats.
Identities = 38/149 (25%), Positives = 61/149 (40%), Gaps = 18/149 (12%)
Query: 37 LHVAAKWGKANMVTLLLSRGANIDNKTRD-GLTALHCAARSGHEAVIEMLLEQGAPISSK 95
+H A G+ + + L +G N+ NK + G T L A+ G + LLE GA
Sbjct: 6 IHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADP--- 62
Query: 96 TKVRGFYILRSGHEAVIEMLLEQGAPISSKTKVAAVLLENGASLTSTTKKGFTPLHLTGK 155
+IL E+ + + A T + +LLE + G TPL +
Sbjct: 63 ------HILAKERESALSL-----ASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVR 111
Query: 156 YGHIKVAKLLLQKDAPVDFQ---GKAPVD 181
H+K + LL + A + + G P+D
Sbjct: 112 GNHVKCVEALLARGADLTTEADSGYTPMD 140
Score = 32.0 bits (71), Expect = 2.2, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 51/122 (41%), Gaps = 2/122 (1%)
Query: 188 LTALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIE 247
T L A+ G + LL+ ADP+ A + L +A +V LLL+ I
Sbjct: 37 FTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDIN 96
Query: 248 ATT-EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLL 306
P+L+ A + N +K VE LL GA + + + +A KV +++
Sbjct: 97 IYDWNGGTPLLY-AVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIE 155
Query: 307 KH 308
H
Sbjct: 156 NH 157
>pdb|1IHB|A Chain A, Crystal Structure Of P18-Ink4c(Ink6)
pdb|1IHB|B Chain B, Crystal Structure Of P18-Ink4c(Ink6)
Length = 162
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/106 (36%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
Query: 1116 DIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLC 1175
+IA LL GA P+ + GF +H +A G D LLE ADV+ G PLHL
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 1176 AQEDRVGVAELLLKNNA-QVDTPTKKGFTPLHIACHYGQISMARLL 1220
A+E + V E L+K+ A V KG T +A YG+ + L+
Sbjct: 111 AKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLM 156
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 54/116 (46%), Gaps = 1/116 (0%)
Query: 999 RLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFT 1058
+LGN +I LL GA D + + +H AA+ G + LLE A + +G
Sbjct: 46 KLGNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNL 105
Query: 1059 PLHLTGKYGHIKVAKLLLQKDAP-VDFQGKNGVTPLHVASHYDHQNVALLLLEKGA 1113
PLHL K GH++V + L++ A V + G T +A Y V L+ GA
Sbjct: 106 PLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGA 161
Score = 49.7 bits (117), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 1301 GHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTP 1360
G+ I LL RGA+P+ ++T GF +H A G + + LL+ A+V+ ++G P
Sbjct: 48 GNPEIARRLLLRGANPDLKDRT-GFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLP 106
Query: 1361 LHHSAQQGHSTIVALLLDRGAS 1382
LH +A++GH +V L+ AS
Sbjct: 107 LHLAAKEGHLRVVEFLVKHTAS 128
Score = 47.8 bits (112), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Query: 189 TALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEA 248
TAL V G+ +A+ LL + A+P+ + GF +H A + + ++ LL+ A +
Sbjct: 40 TALQVM-KLGNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNI 98
Query: 249 TTEVREPMLHIACKKNRIKVVELLLKHGAS 278
LH+A K+ ++VVE L+KH AS
Sbjct: 99 EDNEGNLPLHLAAKEGHLRVVEFLVKHTAS 128
Score = 43.1 bits (100), Expect = 0.001, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Query: 1025 TALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDF 1084
TAL + K G E+A LL GA+ + GF +H + G + + LL+ A V+
Sbjct: 40 TALQVM-KLGNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNI 98
Query: 1085 QGKNGVTPLHVASHYDHQNVALLLLEKGAS 1114
+ G PLH+A+ H V L++ AS
Sbjct: 99 EDNEGNLPLHLAAKEGHLRVVEFLVKHTAS 128
Score = 40.0 bits (92), Expect = 0.008, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 1258 GFTPLHHSAQQGHSTIVALLLDRGASPN-ATNKGFTPLHHSAQQGHSTIVALLLDRGASP 1316
GF +H +A+ G + LL+ A N N+G PLH +A++GH +V L+ AS
Sbjct: 70 GFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASN 129
Query: 1317 NATNKTRGFTPLHIACHYGQISMARLL 1343
+G T +A YG+ + L+
Sbjct: 130 VGHRNHKGDTACDLARLYGRNEVVSLM 156
Score = 39.3 bits (90), Expect = 0.015, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 42 KWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPIS---SKTKV 98
K G + LL RGAN D K R G +H AAR+G ++ LLE A ++ ++ +
Sbjct: 46 KLGNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNL 105
Query: 99 RGFYILRSGHEAVIEMLLEQGA 120
+ GH V+E L++ A
Sbjct: 106 PLHLAAKEGHLRVVEFLVKHTA 127
Score = 38.9 bits (89), Expect = 0.018, Method: Composition-based stats.
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 1/113 (0%)
Query: 964 ILRLATCDVLPQCETRLNFSNLRVREQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDL 1023
+++L ++ + R +L+ R +H A+R G +D + LL+ A V+ +
Sbjct: 44 VMKLGNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEG 103
Query: 1024 YTALHIAAKEGQEEVAAVLLENGAS-LTSTTKKGFTPLHLTGKYGHIKVAKLL 1075
LH+AAKEG V L+++ AS + KG T L YG +V L+
Sbjct: 104 NLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLM 156
Score = 37.7 bits (86), Expect = 0.040, Method: Composition-based stats.
Identities = 34/134 (25%), Positives = 55/134 (41%), Gaps = 26/134 (19%)
Query: 1183 VAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRXXXXXX 1242
+A LL A D + GF +H A G + + LL+ A+V + N
Sbjct: 52 IARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDN---------- 101
Query: 1243 XXXXXXXXYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASP--NATNKGFTPLHHSAQQ 1300
+G PLH +A++GH +V L+ AS + +KG T +
Sbjct: 102 --------------EGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLY 147
Query: 1301 GHSTIVALLLDRGA 1314
G + +V+L+ GA
Sbjct: 148 GRNEVVSLMQANGA 161
Score = 35.4 bits (80), Expect = 0.25, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 54/122 (44%), Gaps = 15/122 (12%)
Query: 127 KVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPV---DFQGKAPVDDV 183
++A LL GA+ + GF +H + G + + LL+ A V D +G P
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLP---- 106
Query: 184 TVDYLTALHVAAHCGHARVAKTLLDKKA-DPNARALNGFTPLHIACKKNRIKVVELLLKH 242
LH+AA GH RV + L+ A + R G T +A R +VV L+ +
Sbjct: 107 -------LHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQAN 159
Query: 243 GA 244
GA
Sbjct: 160 GA 161
Score = 34.7 bits (78), Expect = 0.42, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 39/79 (49%)
Query: 861 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 920
++ LL GA+ + ++H A + + ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 921 CKKNRIKVVELLLKHGASS 939
K+ ++VVE L+KH AS+
Sbjct: 111 AKEGHLRVVEFLVKHTASN 129
Score = 34.3 bits (77), Expect = 0.50, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 234 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 293
++ LL GA+ + ++H A + + ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 294 CKKNRIKVVELLLKHGAS 311
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 34.3 bits (77), Expect = 0.50, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 267 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 326
++ LL GA+ + ++H A + + ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 327 CKKNRIKVVELLLKHGAS 344
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 34.3 bits (77), Expect = 0.50, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 300 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 359
++ LL GA+ + ++H A + + ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 360 CKKNRIKVVELLLKHGAS 377
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 34.3 bits (77), Expect = 0.50, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 333 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 392
++ LL GA+ + ++H A + + ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 393 CKKNRIKVVELLLKHGAS 410
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 34.3 bits (77), Expect = 0.50, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 366 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 425
++ LL GA+ + ++H A + + ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 426 CKKNRIKVVELLLKHGAS 443
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 34.3 bits (77), Expect = 0.50, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 399 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 458
++ LL GA+ + ++H A + + ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 459 CKKNRIKVVELLLKHGAS 476
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 34.3 bits (77), Expect = 0.50, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 432 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 491
++ LL GA+ + ++H A + + ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 492 CKKNRIKVVELLLKHGAS 509
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 34.3 bits (77), Expect = 0.50, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 465 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 524
++ LL GA+ + ++H A + + ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 525 CKKNRIKVVELLLKHGAS 542
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 34.3 bits (77), Expect = 0.50, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 498 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 557
++ LL GA+ + ++H A + + ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 558 CKKNRIKVVELLLKHGAS 575
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 34.3 bits (77), Expect = 0.50, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 531 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 590
++ LL GA+ + ++H A + + ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 591 CKKNRIKVVELLLKHGAS 608
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 34.3 bits (77), Expect = 0.50, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 564 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 623
++ LL GA+ + ++H A + + ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 624 CKKNRIKVVELLLKHGAS 641
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 34.3 bits (77), Expect = 0.50, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 597 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 656
++ LL GA+ + ++H A + + ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 657 CKKNRIKVVELLLKHGAS 674
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 34.3 bits (77), Expect = 0.50, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 630 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 689
++ LL GA+ + ++H A + + ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 690 CKKNRIKVVELLLKHGAS 707
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 34.3 bits (77), Expect = 0.50, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 663 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 722
++ LL GA+ + ++H A + + ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 723 CKKNRIKVVELLLKHGAS 740
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 34.3 bits (77), Expect = 0.50, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 696 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 755
++ LL GA+ + ++H A + + ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 756 CKKNRIKVVELLLKHGAS 773
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 34.3 bits (77), Expect = 0.50, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 729 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 788
++ LL GA+ + ++H A + + ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 789 CKKNRIKVVELLLKHGAS 806
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 34.3 bits (77), Expect = 0.50, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 762 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 821
++ LL GA+ + ++H A + + ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 822 CKKNRIKVVELLLKHGAS 839
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 34.3 bits (77), Expect = 0.50, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 795 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 854
++ LL GA+ + ++H A + + ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 855 CKKNRIKVVELLLKHGAS 872
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
>pdb|1BU9|A Chain A, Solution Structure Of P18-Ink4c, 21 Structures
pdb|1G3N|B Chain B, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|F Chain F, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 168
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/106 (36%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
Query: 1116 DIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLC 1175
+IA LL GA P+ + GF +H +A G D LLE ADV+ G PLHL
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 1176 AQEDRVGVAELLLKNNA-QVDTPTKKGFTPLHIACHYGQISMARLL 1220
A+E + V E L+K+ A V KG T +A YG+ + L+
Sbjct: 111 AKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLM 156
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 54/116 (46%), Gaps = 1/116 (0%)
Query: 999 RLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFT 1058
+LGN +I LL GA D + + +H AA+ G + LLE A + +G
Sbjct: 46 KLGNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNL 105
Query: 1059 PLHLTGKYGHIKVAKLLLQKDAP-VDFQGKNGVTPLHVASHYDHQNVALLLLEKGA 1113
PLHL K GH++V + L++ A V + G T +A Y V L+ GA
Sbjct: 106 PLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGA 161
Score = 49.7 bits (117), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 1301 GHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTP 1360
G+ I LL RGA+P+ ++T GF +H A G + + LL+ A+V+ ++G P
Sbjct: 48 GNPEIARRLLLRGANPDLKDRT-GFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLP 106
Query: 1361 LHHSAQQGHSTIVALLLDRGAS 1382
LH +A++GH +V L+ AS
Sbjct: 107 LHLAAKEGHLRVVEFLVKHTAS 128
Score = 47.8 bits (112), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Query: 189 TALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEA 248
TAL V G+ +A+ LL + A+P+ + GF +H A + + ++ LL+ A +
Sbjct: 40 TALQVM-KLGNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNI 98
Query: 249 TTEVREPMLHIACKKNRIKVVELLLKHGAS 278
LH+A K+ ++VVE L+KH AS
Sbjct: 99 EDNEGNLPLHLAAKEGHLRVVEFLVKHTAS 128
Score = 43.1 bits (100), Expect = 0.001, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Query: 1025 TALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDF 1084
TAL + K G E+A LL GA+ + GF +H + G + + LL+ A V+
Sbjct: 40 TALQVM-KLGNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNI 98
Query: 1085 QGKNGVTPLHVASHYDHQNVALLLLEKGAS 1114
+ G PLH+A+ H V L++ AS
Sbjct: 99 EDNEGNLPLHLAAKEGHLRVVEFLVKHTAS 128
Score = 40.0 bits (92), Expect = 0.008, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 1258 GFTPLHHSAQQGHSTIVALLLDRGASPN-ATNKGFTPLHHSAQQGHSTIVALLLDRGASP 1316
GF +H +A+ G + LL+ A N N+G PLH +A++GH +V L+ AS
Sbjct: 70 GFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASN 129
Query: 1317 NATNKTRGFTPLHIACHYGQISMARLL 1343
+G T +A YG+ + L+
Sbjct: 130 VGHRNHKGDTACDLARLYGRNEVVSLM 156
Score = 39.3 bits (90), Expect = 0.015, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 42 KWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISSKTKVRGF 101
K G + LL RGAN D K R G +H AAR+G ++ LLE A ++ +
Sbjct: 46 KLGNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNL 105
Query: 102 YI---LRSGHEAVIEMLLEQGA 120
+ + GH V+E L++ A
Sbjct: 106 PLHLAAKEGHLRVVEFLVKHTA 127
Score = 38.9 bits (89), Expect = 0.019, Method: Composition-based stats.
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 1/113 (0%)
Query: 964 ILRLATCDVLPQCETRLNFSNLRVREQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDL 1023
+++L ++ + R +L+ R +H A+R G +D + LL+ A V+ +
Sbjct: 44 VMKLGNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEG 103
Query: 1024 YTALHIAAKEGQEEVAAVLLENGAS-LTSTTKKGFTPLHLTGKYGHIKVAKLL 1075
LH+AAKEG V L+++ AS + KG T L YG +V L+
Sbjct: 104 NLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLM 156
Score = 38.5 bits (88), Expect = 0.024, Method: Composition-based stats.
Identities = 37/140 (26%), Positives = 58/140 (41%), Gaps = 27/140 (19%)
Query: 1183 VAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRXXXXXX 1242
+A LL A D + GF +H A G + + LL+ A+V + N
Sbjct: 52 IARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDN---------- 101
Query: 1243 XXXXXXXXYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASP--NATNKGFTPLHHSAQQ 1300
+G PLH +A++GH +V L+ AS + +KG T +
Sbjct: 102 --------------EGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLY 147
Query: 1301 GHSTIVALLLDRGASPNATN 1320
G + +V+L+ GA ATN
Sbjct: 148 GRNEVVSLMQANGAG-GATN 166
Score = 35.4 bits (80), Expect = 0.25, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 54/122 (44%), Gaps = 15/122 (12%)
Query: 127 KVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPV---DFQGKAPVDDV 183
++A LL GA+ + GF +H + G + + LL+ A V D +G P
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLP---- 106
Query: 184 TVDYLTALHVAAHCGHARVAKTLLDKKA-DPNARALNGFTPLHIACKKNRIKVVELLLKH 242
LH+AA GH RV + L+ A + R G T +A R +VV L+ +
Sbjct: 107 -------LHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQAN 159
Query: 243 GA 244
GA
Sbjct: 160 GA 161
Score = 34.7 bits (78), Expect = 0.42, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 39/79 (49%)
Query: 861 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 920
++ LL GA+ + ++H A + + ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 921 CKKNRIKVVELLLKHGASS 939
K+ ++VVE L+KH AS+
Sbjct: 111 AKEGHLRVVEFLVKHTASN 129
Score = 34.3 bits (77), Expect = 0.50, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 234 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 293
++ LL GA+ + ++H A + + ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 294 CKKNRIKVVELLLKHGAS 311
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 34.3 bits (77), Expect = 0.50, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 267 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 326
++ LL GA+ + ++H A + + ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 327 CKKNRIKVVELLLKHGAS 344
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 34.3 bits (77), Expect = 0.50, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 300 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 359
++ LL GA+ + ++H A + + ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 360 CKKNRIKVVELLLKHGAS 377
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 34.3 bits (77), Expect = 0.50, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 333 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 392
++ LL GA+ + ++H A + + ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 393 CKKNRIKVVELLLKHGAS 410
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 34.3 bits (77), Expect = 0.50, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 366 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 425
++ LL GA+ + ++H A + + ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 426 CKKNRIKVVELLLKHGAS 443
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 34.3 bits (77), Expect = 0.50, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 399 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 458
++ LL GA+ + ++H A + + ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 459 CKKNRIKVVELLLKHGAS 476
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 34.3 bits (77), Expect = 0.50, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 432 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 491
++ LL GA+ + ++H A + + ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 492 CKKNRIKVVELLLKHGAS 509
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 34.3 bits (77), Expect = 0.50, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 465 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 524
++ LL GA+ + ++H A + + ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 525 CKKNRIKVVELLLKHGAS 542
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 34.3 bits (77), Expect = 0.50, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 498 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 557
++ LL GA+ + ++H A + + ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 558 CKKNRIKVVELLLKHGAS 575
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 34.3 bits (77), Expect = 0.50, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 531 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 590
++ LL GA+ + ++H A + + ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 591 CKKNRIKVVELLLKHGAS 608
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 34.3 bits (77), Expect = 0.50, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 564 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 623
++ LL GA+ + ++H A + + ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 624 CKKNRIKVVELLLKHGAS 641
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 34.3 bits (77), Expect = 0.50, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 597 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 656
++ LL GA+ + ++H A + + ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 657 CKKNRIKVVELLLKHGAS 674
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 34.3 bits (77), Expect = 0.50, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 630 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 689
++ LL GA+ + ++H A + + ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 690 CKKNRIKVVELLLKHGAS 707
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 34.3 bits (77), Expect = 0.50, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 663 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 722
++ LL GA+ + ++H A + + ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 723 CKKNRIKVVELLLKHGAS 740
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 34.3 bits (77), Expect = 0.50, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 696 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 755
++ LL GA+ + ++H A + + ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 756 CKKNRIKVVELLLKHGAS 773
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 34.3 bits (77), Expect = 0.50, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 729 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 788
++ LL GA+ + ++H A + + ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 789 CKKNRIKVVELLLKHGAS 806
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 34.3 bits (77), Expect = 0.50, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 762 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 821
++ LL GA+ + ++H A + + ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 822 CKKNRIKVVELLLKHGAS 839
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 34.3 bits (77), Expect = 0.50, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 795 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 854
++ LL GA+ + ++H A + + ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 855 CKKNRIKVVELLLKHGAS 872
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
>pdb|3UXG|A Chain A, Crystal Structure Of Rfxank
Length = 172
Score = 55.1 bits (131), Expect = 3e-07, Method: Composition-based stats.
Identities = 47/170 (27%), Positives = 73/170 (42%), Gaps = 26/170 (15%)
Query: 1167 NGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSAN 1226
+ L+ L AQ + + E L K + V+ P ++GFTPL A +G+I R LL+ A+
Sbjct: 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGAD 61
Query: 1227 VTVPKNFPSRXXXXXXXXXXXXXXYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNA 1286
+ + + L ++ G++ IV LLL+R N
Sbjct: 62 PHI------------------------LAKERESALSLASTGGYTDIVGLLLERDVDINI 97
Query: 1287 TN-KGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYG 1335
+ G TPL ++ H V LL RGA T G+TP+ +A G
Sbjct: 98 YDWNGGTPLLYAVHGNHVKCVEALLARGADL-TTEADSGYTPMDLAVALG 146
Score = 55.1 bits (131), Expect = 3e-07, Method: Composition-based stats.
Identities = 43/154 (27%), Positives = 68/154 (44%), Gaps = 14/154 (9%)
Query: 1060 LHLTGKYGHIKVAKLLLQK-DAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIA 1118
+H G + K L+K D V+ + G TPL AS + ++
Sbjct: 6 IHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAF-------------GEIETV 52
Query: 1119 TTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQE 1178
LLE+GA P+ + + L L+++ G+ D+ +LLE D++ NG TPL
Sbjct: 53 RFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVHG 112
Query: 1179 DRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYG 1212
+ V E LL A + T G+TP+ +A G
Sbjct: 113 NHVKCVEALLARGADLTTEADSGYTPMDLAVALG 146
Score = 54.3 bits (129), Expect = 5e-07, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 59/118 (50%), Gaps = 2/118 (1%)
Query: 1256 DQGFTPLHHSAQQGHSTIVALLLDRGASPNATNKGF-TPLHHSAQQGHSTIVALLLDRGA 1314
++GFTPL ++ G V LL+ GA P+ K + L ++ G++ IV LLL+R
Sbjct: 34 ERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDV 93
Query: 1315 SPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTI 1372
N + G TPL A H + LL + A+++ D G+TP+ + G+ +
Sbjct: 94 DINIYDWNGG-TPLLYAVHGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKV 150
Score = 52.8 bits (125), Expect = 2e-06, Method: Composition-based stats.
Identities = 43/148 (29%), Positives = 66/148 (44%), Gaps = 4/148 (2%)
Query: 961 SSSILRLATCDVLPQCETRL----NFSNLRVREQQTPLHIASRLGNVDIVMLLLQHGAAV 1016
S SI +LA L Q + L N N TPL AS G ++ V LL+ GA
Sbjct: 3 SLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADP 62
Query: 1017 DSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLL 1076
K+ +AL +A+ G ++ +LLE + G TPL H+K + LL
Sbjct: 63 HILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVHGNHVKCVEALL 122
Query: 1077 QKDAPVDFQGKNGVTPLHVASHYDHQNV 1104
+ A + + +G TP+ +A ++ V
Sbjct: 123 ARGADLTTEADSGYTPMDLAVALGYRKV 150
Score = 52.4 bits (124), Expect = 2e-06, Method: Composition-based stats.
Identities = 37/134 (27%), Positives = 61/134 (45%), Gaps = 13/134 (9%)
Query: 1024 YTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVD 1083
+T L A+ G+ E LLE GA K+ + L L G+ + LLL++D ++
Sbjct: 37 FTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDIN 96
Query: 1084 FQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSA 1143
NG TPL A H +H LL +GA + E+ +G+TP+ L+
Sbjct: 97 IYDWNGGTPLLYAVHGNHVKCVEALLARGADL-------------TTEADSGYTPMDLAV 143
Query: 1144 SEGHADMSAMLLEH 1157
+ G+ + ++ H
Sbjct: 144 ALGYRKVQQVIENH 157
Score = 47.4 bits (111), Expect = 5e-05, Method: Composition-based stats.
Identities = 40/124 (32%), Positives = 57/124 (45%), Gaps = 7/124 (5%)
Query: 1262 LHHSAQQGHSTIVALLLDRGASPNATNK----GFTPLHHSAQQGHSTIVALLLDRGASPN 1317
+H A QG + L +G N NK GFTPL ++ G V LL+ GA P+
Sbjct: 6 IHQLAAQGELDQLKEHLRKG--DNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPH 63
Query: 1318 ATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLL 1377
K R + L +A G + LLL++ +++ G TPL ++ H V LL
Sbjct: 64 ILAKERE-SALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVHGNHVKCVEALL 122
Query: 1378 DRGA 1381
RGA
Sbjct: 123 ARGA 126
Score = 45.1 bits (105), Expect = 3e-04, Method: Composition-based stats.
Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 14/135 (10%)
Query: 31 QHNITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGA 90
+ TPL A+ +G+ V LL GA+ ++ +AL A+ G+ ++ +LLE+
Sbjct: 34 ERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDV 93
Query: 91 PISSKTKVRGFYILRSGHEAVIEMLLEQGAPISSKTKVAAVLLENGASLTSTTKKGFTPL 150
I+ G +L + H + K LL GA LT+ G+TP+
Sbjct: 94 DINIYDWNGGTPLLYAVH--------------GNHVKCVEALLARGADLTTEADSGYTPM 139
Query: 151 HLTGKYGHIKVAKLL 165
L G+ KV +++
Sbjct: 140 DLAVALGYRKVQQVI 154
Score = 43.5 bits (101), Expect = 8e-04, Method: Composition-based stats.
Identities = 41/143 (28%), Positives = 58/143 (40%), Gaps = 6/143 (4%)
Query: 199 HARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVREPMLH 258
H R L++K P+ R GFTPL A I+ V LL+ GA + RE L
Sbjct: 21 HLRKGDNLVNK---PDER---GFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALS 74
Query: 259 IACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEV 318
+A +V LLL+ I L A N +K VE LL GA + +
Sbjct: 75 LASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVHGNHVKCVEALLARGADLTTEADS 134
Query: 319 REPMLHIACKKNRIKVVELLLKH 341
+ +A KV +++ H
Sbjct: 135 GYTPMDLAVALGYRKVQQVIENH 157
Score = 43.1 bits (100), Expect = 0.001, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 44/94 (46%)
Query: 1135 GFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQV 1194
GFTPL +++ G + LLE GAD AK + L L + + LLL+ + +
Sbjct: 36 GFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDI 95
Query: 1195 DTPTKKGFTPLHIACHYGQISMARLLLDQSANVT 1228
+ G TPL A H + LL + A++T
Sbjct: 96 NIYDWNGGTPLLYAVHGNHVKCVEALLARGADLT 129
Score = 43.1 bits (100), Expect = 0.001, Method: Composition-based stats.
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Query: 1294 LHHSAQQGHSTIVALLLDRGASPNATNK--TRGFTPLHIACHYGQISMARLLLDQSANVS 1351
+H A QG + L +G N NK RGFTPL A +G+I R LL+ A+
Sbjct: 6 IHQLAAQGELDQLKEHLRKG--DNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPH 63
Query: 1352 CTTDQGFTPLHHSAQQGHSTIVALLLDRGASPN 1384
+ + L ++ G++ IV LLL+R N
Sbjct: 64 ILAKERESALSLASTGGYTDIVGLLLERDVDIN 96
Score = 43.1 bits (100), Expect = 0.001, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 44/88 (50%)
Query: 988 REQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGA 1047
+E+++ L +AS G DIV LLL+ ++ + T L A + LL GA
Sbjct: 67 KERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVHGNHVKCVEALLARGA 126
Query: 1048 SLTSTTKKGFTPLHLTGKYGHIKVAKLL 1075
LT+ G+TP+ L G+ KV +++
Sbjct: 127 DLTTEADSGYTPMDLAVALGYRKVQQVI 154
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 14/114 (12%)
Query: 132 LLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPV---DFQGKAPVDDVTVDYL 188
LLE GA K+ + L L G+ + LLL++D + D+ G P
Sbjct: 55 LLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTP--------- 105
Query: 189 TALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKH 242
L A H H + + LL + AD A +G+TP+ +A KV +++ H
Sbjct: 106 --LLYAVHGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENH 157
Score = 30.8 bits (68), Expect = 5.2, Method: Composition-based stats.
Identities = 31/121 (25%), Positives = 47/121 (38%)
Query: 188 LTALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIE 247
T L A+ G + LL+ ADP+ A + L +A +V LLL+ I
Sbjct: 37 FTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDIN 96
Query: 248 ATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 307
L A N +K VE LL GA + + + +A KV +++
Sbjct: 97 IYDWNGGTPLLYAVHGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIEN 156
Query: 308 H 308
H
Sbjct: 157 H 157
>pdb|2RFA|A Chain A, Crystal Structure Of The Mouse Trpv6 Ankyrin Repeat Domain
Length = 232
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 97/215 (45%), Gaps = 16/215 (7%)
Query: 1025 TALHIAAKEGQEEVAAVLLE-NGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVD 1083
+ L +AAKE + + LL+ G + G T LH+ Y +++ A +L++ +
Sbjct: 5 SPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELV 64
Query: 1084 FQG-----KNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTP 1138
F+ G T LH+A + N+ LL +GAS+ T + +P+ G P
Sbjct: 65 FEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHP 124
Query: 1139 LHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLH-LCAQEDRVGVAEL--LLKNNAQVD 1195
L +A G ++ +L+EHGAD+ G T LH L Q ++ ++ LL + D
Sbjct: 125 LSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGD 184
Query: 1196 -------TPTKKGFTPLHIACHYGQISMARLLLDQ 1223
P +G TP +A G I M + L+ +
Sbjct: 185 HLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQK 219
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 73/163 (44%), Gaps = 33/163 (20%)
Query: 222 TPLHIACKKNRIKVVELLLKH-GASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIE 280
+PL +A K+N ++ + LLK G + + E LHIA + ++ +L+ E
Sbjct: 5 SPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLM------E 58
Query: 281 ATTE-VREPM----------LHIACKKNRIKVVELLLKHGASIEA--TTEV--------- 318
A E V EPM LHIA + +V LL GAS+ A T V
Sbjct: 59 AAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLI 118
Query: 319 ---REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHI 358
P+ AC + ++V LL++HGA I A + +LHI
Sbjct: 119 YYGEHPLSFAACVGSE-EIVRLLIEHGADIRAQDSLGNTVLHI 160
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 83/194 (42%), Gaps = 37/194 (19%)
Query: 780 VREPMLHIACKKNRIKVVELLLKH-GASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 838
+ E L +A K+N ++ + LLK G + + E LHIA + ++ +L+
Sbjct: 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLM---- 57
Query: 839 SIEATTE-VREPM----------LHIACKKNRIKVVELLLKHGASIEA--TTEV------ 879
EA E V EPM LHIA + +V LL GAS+ A T V
Sbjct: 58 --EAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPH 115
Query: 880 ------REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIAC----KKNRIKVV 929
P+ AC + ++V LL++HGA I A + +LHI K ++
Sbjct: 116 NLIYYGEHPLSFAACVGSE-EIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMY 174
Query: 930 ELLLKHGASSHVVS 943
LLL + H+ S
Sbjct: 175 NLLLSYDGGDHLKS 188
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 73/166 (43%), Gaps = 33/166 (19%)
Query: 252 VREPMLHIACKKNRIKVVELLLKH-GASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 310
+ E L +A K+N ++ + LLK G + + E LHIA + ++ +L+
Sbjct: 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLM---- 57
Query: 311 SIEATTE-VREPM----------LHIACKKNRIKVVELLLKHGASIEA--TTEV------ 351
EA E V EPM LHIA + +V LL GAS+ A T V
Sbjct: 58 --EAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPH 115
Query: 352 ------REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHI 391
P+ AC + ++V LL++HGA I A + +LHI
Sbjct: 116 NLIYYGEHPLSFAACVGSE-EIVRLLIEHGADIRAQDSLGNTVLHI 160
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 73/166 (43%), Gaps = 33/166 (19%)
Query: 285 VREPMLHIACKKNRIKVVELLLKH-GASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 343
+ E L +A K+N ++ + LLK G + + E LHIA + ++ +L+
Sbjct: 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLM---- 57
Query: 344 SIEATTE-VREPM----------LHIACKKNRIKVVELLLKHGASIEA--TTEV------ 384
EA E V EPM LHIA + +V LL GAS+ A T V
Sbjct: 58 --EAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPH 115
Query: 385 ------REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHI 424
P+ AC + ++V LL++HGA I A + +LHI
Sbjct: 116 NLIYYGEHPLSFAACVGSE-EIVRLLIEHGADIRAQDSLGNTVLHI 160
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 73/166 (43%), Gaps = 33/166 (19%)
Query: 318 VREPMLHIACKKNRIKVVELLLKH-GASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 376
+ E L +A K+N ++ + LLK G + + E LHIA + ++ +L+
Sbjct: 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLM---- 57
Query: 377 SIEATTE-VREPM----------LHIACKKNRIKVVELLLKHGASIEA--TTEV------ 417
EA E V EPM LHIA + +V LL GAS+ A T V
Sbjct: 58 --EAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPH 115
Query: 418 ------REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHI 457
P+ AC + ++V LL++HGA I A + +LHI
Sbjct: 116 NLIYYGEHPLSFAACVGSE-EIVRLLIEHGADIRAQDSLGNTVLHI 160
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 73/166 (43%), Gaps = 33/166 (19%)
Query: 351 VREPMLHIACKKNRIKVVELLLKH-GASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 409
+ E L +A K+N ++ + LLK G + + E LHIA + ++ +L+
Sbjct: 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLM---- 57
Query: 410 SIEATTE-VREPM----------LHIACKKNRIKVVELLLKHGASIEA--TTEV------ 450
EA E V EPM LHIA + +V LL GAS+ A T V
Sbjct: 58 --EAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPH 115
Query: 451 ------REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHI 490
P+ AC + ++V LL++HGA I A + +LHI
Sbjct: 116 NLIYYGEHPLSFAACVGSE-EIVRLLIEHGADIRAQDSLGNTVLHI 160
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 73/166 (43%), Gaps = 33/166 (19%)
Query: 384 VREPMLHIACKKNRIKVVELLLKH-GASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 442
+ E L +A K+N ++ + LLK G + + E LHIA + ++ +L+
Sbjct: 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLM---- 57
Query: 443 SIEATTE-VREPM----------LHIACKKNRIKVVELLLKHGASIEA--TTEV------ 483
EA E V EPM LHIA + +V LL GAS+ A T V
Sbjct: 58 --EAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPH 115
Query: 484 ------REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHI 523
P+ AC + ++V LL++HGA I A + +LHI
Sbjct: 116 NLIYYGEHPLSFAACVGSE-EIVRLLIEHGADIRAQDSLGNTVLHI 160
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 73/166 (43%), Gaps = 33/166 (19%)
Query: 417 VREPMLHIACKKNRIKVVELLLKH-GASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 475
+ E L +A K+N ++ + LLK G + + E LHIA + ++ +L+
Sbjct: 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLM---- 57
Query: 476 SIEATTE-VREPM----------LHIACKKNRIKVVELLLKHGASIEA--TTEV------ 516
EA E V EPM LHIA + +V LL GAS+ A T V
Sbjct: 58 --EAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPH 115
Query: 517 ------REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHI 556
P+ AC + ++V LL++HGA I A + +LHI
Sbjct: 116 NLIYYGEHPLSFAACVGSE-EIVRLLIEHGADIRAQDSLGNTVLHI 160
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 73/166 (43%), Gaps = 33/166 (19%)
Query: 450 VREPMLHIACKKNRIKVVELLLKH-GASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 508
+ E L +A K+N ++ + LLK G + + E LHIA + ++ +L+
Sbjct: 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLM---- 57
Query: 509 SIEATTE-VREPM----------LHIACKKNRIKVVELLLKHGASIEA--TTEV------ 549
EA E V EPM LHIA + +V LL GAS+ A T V
Sbjct: 58 --EAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPH 115
Query: 550 ------REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHI 589
P+ AC + ++V LL++HGA I A + +LHI
Sbjct: 116 NLIYYGEHPLSFAACVGSE-EIVRLLIEHGADIRAQDSLGNTVLHI 160
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 73/166 (43%), Gaps = 33/166 (19%)
Query: 483 VREPMLHIACKKNRIKVVELLLKH-GASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 541
+ E L +A K+N ++ + LLK G + + E LHIA + ++ +L+
Sbjct: 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLM---- 57
Query: 542 SIEATTE-VREPM----------LHIACKKNRIKVVELLLKHGASIEA--TTEV------ 582
EA E V EPM LHIA + +V LL GAS+ A T V
Sbjct: 58 --EAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPH 115
Query: 583 ------REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHI 622
P+ AC + ++V LL++HGA I A + +LHI
Sbjct: 116 NLIYYGEHPLSFAACVGSE-EIVRLLIEHGADIRAQDSLGNTVLHI 160
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 73/166 (43%), Gaps = 33/166 (19%)
Query: 516 VREPMLHIACKKNRIKVVELLLKH-GASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 574
+ E L +A K+N ++ + LLK G + + E LHIA + ++ +L+
Sbjct: 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLM---- 57
Query: 575 SIEATTE-VREPM----------LHIACKKNRIKVVELLLKHGASIEA--TTEV------ 615
EA E V EPM LHIA + +V LL GAS+ A T V
Sbjct: 58 --EAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPH 115
Query: 616 ------REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHI 655
P+ AC + ++V LL++HGA I A + +LHI
Sbjct: 116 NLIYYGEHPLSFAACVGSE-EIVRLLIEHGADIRAQDSLGNTVLHI 160
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 73/166 (43%), Gaps = 33/166 (19%)
Query: 549 VREPMLHIACKKNRIKVVELLLKH-GASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 607
+ E L +A K+N ++ + LLK G + + E LHIA + ++ +L+
Sbjct: 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLM---- 57
Query: 608 SIEATTE-VREPM----------LHIACKKNRIKVVELLLKHGASIEA--TTEV------ 648
EA E V EPM LHIA + +V LL GAS+ A T V
Sbjct: 58 --EAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPH 115
Query: 649 ------REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHI 688
P+ AC + ++V LL++HGA I A + +LHI
Sbjct: 116 NLIYYGEHPLSFAACVGSE-EIVRLLIEHGADIRAQDSLGNTVLHI 160
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 73/166 (43%), Gaps = 33/166 (19%)
Query: 582 VREPMLHIACKKNRIKVVELLLKH-GASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 640
+ E L +A K+N ++ + LLK G + + E LHIA + ++ +L+
Sbjct: 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLM---- 57
Query: 641 SIEATTE-VREPM----------LHIACKKNRIKVVELLLKHGASIEA--TTEV------ 681
EA E V EPM LHIA + +V LL GAS+ A T V
Sbjct: 58 --EAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPH 115
Query: 682 ------REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHI 721
P+ AC + ++V LL++HGA I A + +LHI
Sbjct: 116 NLIYYGEHPLSFAACVGSE-EIVRLLIEHGADIRAQDSLGNTVLHI 160
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 73/166 (43%), Gaps = 33/166 (19%)
Query: 615 VREPMLHIACKKNRIKVVELLLKH-GASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 673
+ E L +A K+N ++ + LLK G + + E LHIA + ++ +L+
Sbjct: 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLM---- 57
Query: 674 SIEATTE-VREPM----------LHIACKKNRIKVVELLLKHGASIEA--TTEV------ 714
EA E V EPM LHIA + +V LL GAS+ A T V
Sbjct: 58 --EAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPH 115
Query: 715 ------REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHI 754
P+ AC + ++V LL++HGA I A + +LHI
Sbjct: 116 NLIYYGEHPLSFAACVGSE-EIVRLLIEHGADIRAQDSLGNTVLHI 160
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 73/166 (43%), Gaps = 33/166 (19%)
Query: 648 VREPMLHIACKKNRIKVVELLLKH-GASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 706
+ E L +A K+N ++ + LLK G + + E LHIA + ++ +L+
Sbjct: 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLM---- 57
Query: 707 SIEATTE-VREPM----------LHIACKKNRIKVVELLLKHGASIEA--TTEV------ 747
EA E V EPM LHIA + +V LL GAS+ A T V
Sbjct: 58 --EAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPH 115
Query: 748 ------REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHI 787
P+ AC + ++V LL++HGA I A + +LHI
Sbjct: 116 NLIYYGEHPLSFAACVGSE-EIVRLLIEHGADIRAQDSLGNTVLHI 160
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 73/166 (43%), Gaps = 33/166 (19%)
Query: 681 VREPMLHIACKKNRIKVVELLLKH-GASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 739
+ E L +A K+N ++ + LLK G + + E LHIA + ++ +L+
Sbjct: 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLM---- 57
Query: 740 SIEATTE-VREPM----------LHIACKKNRIKVVELLLKHGASIEA--TTEV------ 780
EA E V EPM LHIA + +V LL GAS+ A T V
Sbjct: 58 --EAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPH 115
Query: 781 ------REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHI 820
P+ AC + ++V LL++HGA I A + +LHI
Sbjct: 116 NLIYYGEHPLSFAACVGSE-EIVRLLIEHGADIRAQDSLGNTVLHI 160
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 73/166 (43%), Gaps = 33/166 (19%)
Query: 714 VREPMLHIACKKNRIKVVELLLKH-GASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 772
+ E L +A K+N ++ + LLK G + + E LHIA + ++ +L+
Sbjct: 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLM---- 57
Query: 773 SIEATTE-VREPM----------LHIACKKNRIKVVELLLKHGASIEA--TTEV------ 813
EA E V EPM LHIA + +V LL GAS+ A T V
Sbjct: 58 --EAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPH 115
Query: 814 ------REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHI 853
P+ AC + ++V LL++HGA I A + +LHI
Sbjct: 116 NLIYYGEHPLSFAACVGSE-EIVRLLIEHGADIRAQDSLGNTVLHI 160
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 73/166 (43%), Gaps = 33/166 (19%)
Query: 747 VREPMLHIACKKNRIKVVELLLKH-GASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 805
+ E L +A K+N ++ + LLK G + + E LHIA + ++ +L+
Sbjct: 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLM---- 57
Query: 806 SIEATTE-VREPM----------LHIACKKNRIKVVELLLKHGASIEA--TTEV------ 846
EA E V EPM LHIA + +V LL GAS+ A T V
Sbjct: 58 --EAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPH 115
Query: 847 ------REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHI 886
P+ AC + ++V LL++HGA I A + +LHI
Sbjct: 116 NLIYYGEHPLSFAACVGSE-EIVRLLIEHGADIRAQDSLGNTVLHI 160
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 102/255 (40%), Gaps = 59/255 (23%)
Query: 846 VREPMLHIACKKNRIKVVELLLKH-GASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 904
+ E L +A K+N ++ + LLK G + + E LHIA + ++ +L+
Sbjct: 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLM---- 57
Query: 905 SIEATTE-VREPM----------LHIACKKNRIKVVELLLKHGASSHVVSCYSNVKVHVS 953
EA E V EPM LHIA + +V LL GAS
Sbjct: 58 --EAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGAS--------------- 100
Query: 954 LNKIQDVSSSILRLATCDVLPQCETRLNFSNLRVREQQTPLHIASRLGNVDIVMLLLQHG 1013
VS+ AT V L + + PL A+ +G+ +IV LL++HG
Sbjct: 101 ------VSAR----ATGSVFHYRPHNLIYYG------EHPLSFAACVGSEEIVRLLIEHG 144
Query: 1014 AAVDSTTKDLYTALHIAAKEGQEEVAAVL------LENGASLTS----TTKKGFTPLHLT 1063
A + + T LHI + + A + + G L S +G TP L
Sbjct: 145 ADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLA 204
Query: 1064 GKYGHIKVAKLLLQK 1078
G G+I + + L+QK
Sbjct: 205 GVEGNIVMFQHLMQK 219
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 16/127 (12%)
Query: 146 GFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKAPVDDVTVDYLTALHVAAHCGHARVAKT 205
G T LH+ Y +++ A +L++ + F+ P+ + TALH+A + + +
Sbjct: 37 GETALHIAALYDNLEAAMVLMEAAPELVFE---PMTSELYEGQTALHIAVINQNVNLVRA 93
Query: 206 LLDKKADPNARA-------------LNGFTPLHIACKKNRIKVVELLLKHGASIEATTEV 252
LL + A +ARA G PL A ++V LL++HGA I A +
Sbjct: 94 LLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSL 153
Query: 253 REPMLHI 259
+LHI
Sbjct: 154 GNTVLHI 160
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 86/212 (40%), Gaps = 34/212 (16%)
Query: 912 VREPMLHIACKKNRIKVVELLLKH-GASSHVVSCYSNVKVHVSLNKIQDVSSSILRLATC 970
+ E L +A K+N ++ + LLK G H +H++ + D L
Sbjct: 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIA--ALYD------NLEAA 53
Query: 971 DVLPQCETRLNFSNL--RVREQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKD------ 1022
VL + L F + + E QT LHIA NV++V LL GA+V +
Sbjct: 54 MVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYR 113
Query: 1023 ----LYTALH---IAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHL----TGKYGHIKV 1071
+Y H AA G EE+ +L+E+GA + + G T LH+ K ++
Sbjct: 114 PHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQM 173
Query: 1072 AKLLLQKDAPVDFQ------GKNGVTPLHVAS 1097
LLL D + G+TP +A
Sbjct: 174 YNLLLSYDGGDHLKSLELVPNNQGLTPFKLAG 205
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 55/123 (44%), Gaps = 20/123 (16%)
Query: 189 TALHVAAHCGHARVAKTLLDKKAD----PNARAL-NGFTPLHIACKKNRIKVVELLLKHG 243
TALH+AA + A L++ + P L G T LHIA + +V LL G
Sbjct: 39 TALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARG 98
Query: 244 ASIEA--TTEV------------REPMLHIACKKNRIKVVELLLKHGASIEATTEVREPM 289
AS+ A T V P+ AC + ++V LL++HGA I A + +
Sbjct: 99 ASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSE-EIVRLLIEHGADIRAQDSLGNTV 157
Query: 290 LHI 292
LHI
Sbjct: 158 LHI 160
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 58/135 (42%), Gaps = 32/135 (23%)
Query: 216 RALNGFTPLHIACKKNRIKVVELLLKHGASIEATTE-VREPM----------LHIACKKN 264
R G T LHIA + ++ +L+ EA E V EPM LHIA
Sbjct: 33 RGAMGETALHIAALYDNLEAAMVLM------EAAPELVFEPMTSELYEGQTALHIAVINQ 86
Query: 265 RIKVVELLLKHGASIEA--TTEV------------REPMLHIACKKNRIKVVELLLKHGA 310
+ +V LL GAS+ A T V P+ AC + ++V LL++HGA
Sbjct: 87 NVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSE-EIVRLLIEHGA 145
Query: 311 SIEATTEVREPMLHI 325
I A + +LHI
Sbjct: 146 DIRAQDSLGNTVLHI 160
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 66/164 (40%), Gaps = 25/164 (15%)
Query: 22 TINPFGSHFQHNITPLHVAAKWGKANMVTLLLSRGANID-------------NKTRDGLT 68
P S T LH+A N+V LL+RGA++ N G
Sbjct: 64 VFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEH 123
Query: 69 ALHCAARSGHEAVIEMLLEQGAPISSKTKVRGFYILRSGHEAVIEMLLEQGAPISSKTKV 128
L AA G E ++ +L+E GA I ++ + G+ + ++L+ + +
Sbjct: 124 PLSFAACVGSEEIVRLLIEHGADIRAQDSL--------GNTVLHILILQPNKTFACQMYN 175
Query: 129 AAVLLENGASLTS----TTKKGFTPLHLTGKYGHIKVAKLLLQK 168
+ + G L S +G TP L G G+I + + L+QK
Sbjct: 176 LLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQK 219
Score = 38.9 bits (89), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 92/240 (38%), Gaps = 55/240 (22%)
Query: 1170 TPLHLCAQEDRV-GVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVT 1228
+PL L A+E+ V +++LL +V G T LHIA Y + A +L++ + +
Sbjct: 5 SPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELV 64
Query: 1229 VPKNFPSRXXXXXXXXXXXXXXYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATN 1288
T+ +G T LH + + +V LL RGAS +A
Sbjct: 65 FEP-------------------MTSELYEGQTALHIAVINQNVNLVRALLARGASVSARA 105
Query: 1289 KGFT--------------PLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHI---- 1330
G PL +A G IV LL++ GA A + + G T LHI
Sbjct: 106 TGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQD-SLGNTVLHILILQ 164
Query: 1331 -----ACHYGQISMARLLLDQSANVSCTT------DQGFTPLHHSAQQGHSTIVALLLDR 1379
AC M LLL + +QG TP + +G+ + L+ +
Sbjct: 165 PNKTFACQ-----MYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQK 219
>pdb|1MX2|A Chain A, Structure Of F71n Mutant Of P18ink4c
pdb|1MX2|B Chain B, Structure Of F71n Mutant Of P18ink4c
Length = 168
Score = 51.6 bits (122), Expect = 3e-06, Method: Composition-based stats.
Identities = 38/106 (35%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Query: 1116 DIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLC 1175
+IA LL GA P+ + G +H +A G D LLE ADV+ G PLHL
Sbjct: 51 EIARRLLLRGANPDLKDRTGNAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 1176 AQEDRVGVAELLLKNNA-QVDTPTKKGFTPLHIACHYGQISMARLL 1220
A+E + V E L+K+ A V KG T +A YG+ + L+
Sbjct: 111 AKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLM 156
Score = 50.4 bits (119), Expect = 7e-06, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 53/116 (45%), Gaps = 1/116 (0%)
Query: 999 RLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFT 1058
+LGN +I LL GA D + +H AA+ G + LLE A + +G
Sbjct: 46 KLGNPEIARRLLLRGANPDLKDRTGNAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNL 105
Query: 1059 PLHLTGKYGHIKVAKLLLQKDAP-VDFQGKNGVTPLHVASHYDHQNVALLLLEKGA 1113
PLHL K GH++V + L++ A V + G T +A Y V L+ GA
Sbjct: 106 PLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGA 161
Score = 47.0 bits (110), Expect = 7e-05, Method: Composition-based stats.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 155 KYGHIKVAKLLLQKDAPVDFQGKAPVDDVTVDYLTALHVAAHCGHARVAKTLLDKKADPN 214
K G+ ++A+ LL + A D + + +H AA G +TLL+ +AD N
Sbjct: 46 KLGNPEIARRLLLRGANPDLKDRTGN--------AVIHDAARAGFLDTLQTLLEFQADVN 97
Query: 215 ARALNGFTPLHIACKKNRIKVVELLLKHGAS 245
G PLH+A K+ ++VVE L+KH AS
Sbjct: 98 IEDNEGNLPLHLAAKEGHLRVVEFLVKHTAS 128
Score = 45.8 bits (107), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 1301 GHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTP 1360
G+ I LL RGA+P+ ++T G +H A G + + LL+ A+V+ ++G P
Sbjct: 48 GNPEIARRLLLRGANPDLKDRT-GNAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLP 106
Query: 1361 LHHSAQQGHSTIVALLLDRGAS 1382
LH +A++GH +V L+ AS
Sbjct: 107 LHLAAKEGHLRVVEFLVKHTAS 128
Score = 43.9 bits (102), Expect = 6e-04, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Query: 189 TALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEA 248
TAL V G+ +A+ LL + A+P+ + G +H A + + ++ LL+ A +
Sbjct: 40 TALQVMK-LGNPEIARRLLLRGANPDLKDRTGNAVIHDAARAGFLDTLQTLLEFQADVNI 98
Query: 249 TTEVREPMLHIACKKNRIKVVELLLKHGAS 278
LH+A K+ ++VVE L+KH AS
Sbjct: 99 EDNEGNLPLHLAAKEGHLRVVEFLVKHTAS 128
Score = 40.0 bits (92), Expect = 0.009, Method: Composition-based stats.
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 1/113 (0%)
Query: 964 ILRLATCDVLPQCETRLNFSNLRVREQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDL 1023
+++L ++ + R +L+ R +H A+R G +D + LL+ A V+ +
Sbjct: 44 VMKLGNPEIARRLLLRGANPDLKDRTGNAVIHDAARAGFLDTLQTLLEFQADVNIEDNEG 103
Query: 1024 YTALHIAAKEGQEEVAAVLLENGAS-LTSTTKKGFTPLHLTGKYGHIKVAKLL 1075
LH+AAKEG V L+++ AS + KG T L YG +V L+
Sbjct: 104 NLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLM 156
Score = 39.3 bits (90), Expect = 0.014, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Query: 1025 TALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDF 1084
TAL + K G E+A LL GA+ + G +H + G + + LL+ A V+
Sbjct: 40 TALQVM-KLGNPEIARRLLLRGANPDLKDRTGNAVIHDAARAGFLDTLQTLLEFQADVNI 98
Query: 1085 QGKNGVTPLHVASHYDHQNVALLLLEKGAS 1114
+ G PLH+A+ H V L++ AS
Sbjct: 99 EDNEGNLPLHLAAKEGHLRVVEFLVKHTAS 128
Score = 37.7 bits (86), Expect = 0.047, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 42 KWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPIS---SKTKV 98
K G + LL RGAN D K R G +H AAR+G ++ LLE A ++ ++ +
Sbjct: 46 KLGNPEIARRLLLRGANPDLKDRTGNAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNL 105
Query: 99 RGFYILRSGHEAVIEMLLEQGA 120
+ GH V+E L++ A
Sbjct: 106 PLHLAAKEGHLRVVEFLVKHTA 127
Score = 36.2 bits (82), Expect = 0.12, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Query: 1258 GFTPLHHSAQQGHSTIVALLLDRGASPN-ATNKGFTPLHHSAQQGHSTIVALLLDRGASP 1316
G +H +A+ G + LL+ A N N+G PLH +A++GH +V L+ AS
Sbjct: 70 GNAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASN 129
Query: 1317 NATNKTRGFTPLHIACHYGQISMARLL 1343
+G T +A YG+ + L+
Sbjct: 130 VGHRNHKGDTACDLARLYGRNEVVSLM 156
Score = 35.4 bits (80), Expect = 0.21, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 39/79 (49%)
Query: 861 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 920
++ LL GA+ + ++H A + + ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGNAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 921 CKKNRIKVVELLLKHGASS 939
K+ ++VVE L+KH AS+
Sbjct: 111 AKEGHLRVVEFLVKHTASN 129
Score = 35.4 bits (80), Expect = 0.25, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 234 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 293
++ LL GA+ + ++H A + + ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGNAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 294 CKKNRIKVVELLLKHGAS 311
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 35.4 bits (80), Expect = 0.25, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 267 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 326
++ LL GA+ + ++H A + + ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGNAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 327 CKKNRIKVVELLLKHGAS 344
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 35.4 bits (80), Expect = 0.25, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 300 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 359
++ LL GA+ + ++H A + + ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGNAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 360 CKKNRIKVVELLLKHGAS 377
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 35.4 bits (80), Expect = 0.25, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 333 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 392
++ LL GA+ + ++H A + + ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGNAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 393 CKKNRIKVVELLLKHGAS 410
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 35.4 bits (80), Expect = 0.25, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 366 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 425
++ LL GA+ + ++H A + + ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGNAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 426 CKKNRIKVVELLLKHGAS 443
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 35.4 bits (80), Expect = 0.25, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 399 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 458
++ LL GA+ + ++H A + + ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGNAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 459 CKKNRIKVVELLLKHGAS 476
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 35.4 bits (80), Expect = 0.25, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 432 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 491
++ LL GA+ + ++H A + + ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGNAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 492 CKKNRIKVVELLLKHGAS 509
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 35.4 bits (80), Expect = 0.25, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 465 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 524
++ LL GA+ + ++H A + + ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGNAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 525 CKKNRIKVVELLLKHGAS 542
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 35.4 bits (80), Expect = 0.25, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 498 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 557
++ LL GA+ + ++H A + + ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGNAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 558 CKKNRIKVVELLLKHGAS 575
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 35.4 bits (80), Expect = 0.25, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 531 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 590
++ LL GA+ + ++H A + + ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGNAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 591 CKKNRIKVVELLLKHGAS 608
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 35.4 bits (80), Expect = 0.25, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 564 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 623
++ LL GA+ + ++H A + + ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGNAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 624 CKKNRIKVVELLLKHGAS 641
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 35.4 bits (80), Expect = 0.25, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 597 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 656
++ LL GA+ + ++H A + + ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGNAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 657 CKKNRIKVVELLLKHGAS 674
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 35.4 bits (80), Expect = 0.25, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 630 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 689
++ LL GA+ + ++H A + + ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGNAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 690 CKKNRIKVVELLLKHGAS 707
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 35.4 bits (80), Expect = 0.25, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 663 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 722
++ LL GA+ + ++H A + + ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGNAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 723 CKKNRIKVVELLLKHGAS 740
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 35.4 bits (80), Expect = 0.25, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 696 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 755
++ LL GA+ + ++H A + + ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGNAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 756 CKKNRIKVVELLLKHGAS 773
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 35.4 bits (80), Expect = 0.25, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 729 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 788
++ LL GA+ + ++H A + + ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGNAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 789 CKKNRIKVVELLLKHGAS 806
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 35.4 bits (80), Expect = 0.25, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 762 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 821
++ LL GA+ + ++H A + + ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGNAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 822 CKKNRIKVVELLLKHGAS 839
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 35.4 bits (80), Expect = 0.25, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 795 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 854
++ LL GA+ + ++H A + + ++ LL+ A + LH+A
Sbjct: 51 EIARRLLLRGANPDLKDRTGNAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 855 CKKNRIKVVELLLKHGAS 872
K+ ++VVE L+KH AS
Sbjct: 111 AKEGHLRVVEFLVKHTAS 128
Score = 34.7 bits (78), Expect = 0.34, Method: Composition-based stats.
Identities = 36/140 (25%), Positives = 57/140 (40%), Gaps = 27/140 (19%)
Query: 1183 VAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRXXXXXX 1242
+A LL A D + G +H A G + + LL+ A+V + N
Sbjct: 52 IARRLLLRGANPDLKDRTGNAVIHDAARAGFLDTLQTLLEFQADVNIEDN---------- 101
Query: 1243 XXXXXXXXYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASP--NATNKGFTPLHHSAQQ 1300
+G PLH +A++GH +V L+ AS + +KG T +
Sbjct: 102 --------------EGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLY 147
Query: 1301 GHSTIVALLLDRGASPNATN 1320
G + +V+L+ GA ATN
Sbjct: 148 GRNEVVSLMQANGAG-GATN 166
>pdb|3AAA|C Chain C, Crystal Structure Of Actin Capping Protein In Complex With
V-1
Length = 123
Score = 49.7 bits (117), Expect = 1e-05, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 52/112 (46%), Gaps = 3/112 (2%)
Query: 997 ASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKG 1056
A + G++D V + G V+ T + LH AA GQ E+ LL GA + + K
Sbjct: 14 ALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHH 73
Query: 1057 FTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLL 1108
TPL GH+ KLLL K A +G +G+T D+Q + LL
Sbjct: 74 ITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEAT---DNQAIKALL 122
Score = 48.9 bits (115), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 38/72 (52%)
Query: 1158 GADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMA 1217
G DV+ + G PLH A ++ + E LL A ++ P K TPL A + G +S
Sbjct: 30 GEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCV 89
Query: 1218 RLLLDQSANVTV 1229
+LLL + A+ TV
Sbjct: 90 KLLLSKGADKTV 101
Score = 45.1 bits (105), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 1254 TTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATNK-GFTPLHHSAQQGHSTIVALLLDR 1312
T + G PLH++A G I+ LL +GA NA +K TPL + +GH + V LLL +
Sbjct: 36 TLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCVKLLLSK 95
Query: 1313 GA 1314
GA
Sbjct: 96 GA 97
Score = 44.3 bits (103), Expect = 5e-04, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 1290 GFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSAN 1349
G PLH++A G I+ LL +GA NA +K TPL A + G +S +LLL + A+
Sbjct: 40 GRKPLHYAADCGQLEILEFLLLKGADINAPDKHH-ITPLLSAVYEGHVSCVKLLLSKGAD 98
Query: 1350 VSCTTDQGFTPLHHSAQQGHSTIVALL 1376
+ G T + Q I ALL
Sbjct: 99 KTVKGPDGLTAFEATDNQA---IKALL 122
Score = 42.7 bits (99), Expect = 0.002, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 40/84 (47%)
Query: 1030 AAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNG 1089
A K G + + G + T + G PLH G +++ + LL K A ++ K+
Sbjct: 14 ALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHH 73
Query: 1090 VTPLHVASHYDHQNVALLLLEKGA 1113
+TPL A + H + LLL KGA
Sbjct: 74 ITPLLSAVYEGHVSCVKLLLSKGA 97
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 31/58 (53%)
Query: 1324 GFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGA 1381
G PLH A GQ+ + LL + A+++ TPL + +GH + V LLL +GA
Sbjct: 40 GRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGA 97
Score = 41.2 bits (95), Expect = 0.004, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 35/60 (58%)
Query: 36 PLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISSK 95
PLH AA G+ ++ LL +GA+I+ + +T L A GH + +++LL +GA + K
Sbjct: 43 PLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVK 102
Score = 38.9 bits (89), Expect = 0.018, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 37/93 (39%)
Query: 1111 KGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLT 1170
K +D + G N G PLH +A G ++ LL GAD++ K+ +T
Sbjct: 16 KNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHIT 75
Query: 1171 PLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFT 1203
PL E V +LLL A G T
Sbjct: 76 PLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLT 108
Score = 38.9 bits (89), Expect = 0.020, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 4/87 (4%)
Query: 991 QTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLT 1050
+ PLH A+ G ++I+ LL GA +++ K T L A EG +LL GA T
Sbjct: 41 RKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKT 100
Query: 1051 STTKKGFTPLHLTGKYGHIKVAKLLLQ 1077
G T T + K LLQ
Sbjct: 101 VKGPDGLTAFEATDN----QAIKALLQ 123
Score = 38.9 bits (89), Expect = 0.021, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 29/54 (53%)
Query: 191 LHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGA 244
LH AA CG + + LL K AD NA + TPL A + + V+LLL GA
Sbjct: 44 LHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGA 97
Score = 38.5 bits (88), Expect = 0.026, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 8/87 (9%)
Query: 136 GASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKAPVDDVTVDYLTALHVAA 195
G + T + G PLH G +++ + LL K A ++ K ++T L A
Sbjct: 30 GEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDK--------HHITPLLSAV 81
Query: 196 HCGHARVAKTLLDKKADPNARALNGFT 222
+ GH K LL K AD + +G T
Sbjct: 82 YEGHVSCVKLLLSKGADKTVKGPDGLT 108
Score = 37.4 bits (85), Expect = 0.054, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 30/53 (56%)
Query: 31 QHNITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIE 83
+H+ITPL A G + V LLLS+GA+ K DGLTA +A+++
Sbjct: 71 KHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAIKALLQ 123
Score = 37.0 bits (84), Expect = 0.070, Method: Composition-based stats.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Query: 40 AAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISSKTKVR 99
A K G + V +++G +++ G LH AA G ++E LL +GA I++ K
Sbjct: 14 ALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHH 73
Query: 100 GFYILRS---GHEAVIEMLLEQGAPISSK 125
+L + GH + +++LL +GA + K
Sbjct: 74 ITPLLSAVYEGHVSCVKLLLSKGADKTVK 102
Score = 33.1 bits (74), Expect = 1.1, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 44/116 (37%), Gaps = 26/116 (22%)
Query: 1194 VDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRXXXXXXXXXXXXXXYTN 1253
V+ + G PLH A GQ+ + LL + A++ P
Sbjct: 33 VNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDK--------------------- 71
Query: 1254 TTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATNKGFTPLHHSAQQGHSTIVALL 1309
TPL + +GH + V LLL +GA + T KG L + I ALL
Sbjct: 72 ---HHITPLLSAVYEGHVSCVKLLLSKGA--DKTVKGPDGLTAFEATDNQAIKALL 122
Score = 31.2 bits (69), Expect = 4.6, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 1335 GQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATNK 1388
G + + + + +V+ T + G PLH++A G I+ LL +GA NA +K
Sbjct: 18 GDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDK 71
>pdb|4HBD|A Chain A, Crystal Structure Of Kank2 Ankyrin Repeats
Length = 276
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 61/129 (47%), Gaps = 10/129 (7%)
Query: 1257 QGFTPLHHSAQQGHSTIVALLLDRGASP-NATNK-GFTPLHHSA------QQGHSTIVAL 1308
G T LH+S + +V LLD G + N+ G++P+ +A Q T++ L
Sbjct: 110 NGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQL 169
Query: 1309 LLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQG 1368
R + NA G T L +A +G++ + + LL A+V+ D G T L + + G
Sbjct: 170 F--RLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHG 227
Query: 1369 HSTIVALLL 1377
H I LLL
Sbjct: 228 HKEIAGLLL 236
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 67/155 (43%), Gaps = 20/155 (12%)
Query: 1072 AKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAE 1131
A+LL D V+ NG T LH + + + V LL+ G K + +
Sbjct: 97 ARLL---DYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGV------------CKVDKQ 141
Query: 1132 SVAGFTPLHLSA-----SEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAEL 1186
+ AG++P+ L+A ++ + L G + A++ G T L L RV V +
Sbjct: 142 NRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKA 201
Query: 1187 LLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLL 1221
LL A V+ G T L AC +G +A LLL
Sbjct: 202 LLACEADVNVQDDDGSTALMCACEHGHKEIAGLLL 236
Score = 39.3 bits (90), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 991 QTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLE-NGASL 1049
QT L +A G VD+V LL A V+ D TAL A + G +E+A +LL +
Sbjct: 184 QTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDI 243
Query: 1050 TSTTKKGFTPLHLTGKYGHIKVAKLLLQK 1078
+ T + G T L + G ++A +L +
Sbjct: 244 SLTDRDGSTALMVALDAGQSEIASMLYSR 272
Score = 38.1 bits (87), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 79/208 (37%), Gaps = 42/208 (20%)
Query: 1117 IATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHG-ADVSHAAKNGLTPLHLC 1175
++ LL+Y N G T LH S S + + LL+ G V + G +P+ L
Sbjct: 95 MSARLLDYVV--NIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLT 152
Query: 1176 A------QEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTV 1229
A Q+D V +L N ++ G T L +A +G++ + + LL A+V V
Sbjct: 153 ALATLKTQDDIETVLQLFRLGNINA-KASQAGQTALMLAVSHGRVDVVKALLACEADVNV 211
Query: 1230 PKNFPSRXXXXXXXXXXXXXXYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPN---- 1285
D G T L + + GH I LLL A P+
Sbjct: 212 QD------------------------DDGSTALMCACEHGHKEIAGLLL---AVPSCDIS 244
Query: 1286 -ATNKGFTPLHHSAQQGHSTIVALLLDR 1312
G T L + G S I ++L R
Sbjct: 245 LTDRDGSTALMVALDAGQSEIASMLYSR 272
Score = 35.8 bits (81), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 31 QHNITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLL 86
Q T L +A G+ ++V LL+ A+++ + DG TAL CA GH+ + +LL
Sbjct: 181 QAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLL 236
Score = 33.1 bits (74), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 10/126 (7%)
Query: 189 TALHVAAHCGHARVAKTLLDK---KADPNARALNGFTPLHIAC-----KKNRIKVVELLL 240
TALH + + V + LLD K D RA G++P+ + ++ I+ V L
Sbjct: 113 TALHYSVSHANFPVVQQLLDSGVCKVDKQNRA--GYSPIMLTALATLKTQDDIETVLQLF 170
Query: 241 KHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIK 300
+ G ++ + L +A R+ VV+ LL A + + L AC+ +
Sbjct: 171 RLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKE 230
Query: 301 VVELLL 306
+ LLL
Sbjct: 231 IAGLLL 236
Score = 33.1 bits (74), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 74/196 (37%), Gaps = 23/196 (11%)
Query: 1150 MSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNN-AQVDTPTKKGFTPLHIA 1208
MSA LL++ ++ A NG T LH V + LL + +VD + G++P+
Sbjct: 95 MSARLLDYVVNI--ADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPI--- 149
Query: 1209 CHYGQISMARLLLDQSANVTVPKNFPSRXXXXXXXXXXXXXXYTNTTDQGFTPLHHSAQQ 1268
++ L Q TV + F + G T L +
Sbjct: 150 ----MLTALATLKTQDDIETVLQLF------------RLGNINAKASQAGQTALMLAVSH 193
Query: 1269 GHSTIVALLLDRGASPNA-TNKGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTP 1327
G +V LL A N + G T L + + GH I LLL + + G T
Sbjct: 194 GRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTA 253
Query: 1328 LHIACHYGQISMARLL 1343
L +A GQ +A +L
Sbjct: 254 LMVALDAGQSEIASML 269
>pdb|3EHQ|A Chain A, Crystal Structure Of Human Osteoclast Stimulating Factor
pdb|3EHQ|B Chain B, Crystal Structure Of Human Osteoclast Stimulating Factor
pdb|3EHR|A Chain A, Crystal Structure Of Human Osteoclast Stimulating Factor
pdb|3EHR|B Chain B, Crystal Structure Of Human Osteoclast Stimulating Factor
Length = 222
Score = 48.9 bits (115), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 1293 PLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQ-SANVS 1351
PLH +A++G+ + + LD N +K G T L+ ACH G + L Q + ++
Sbjct: 76 PLHEAAKRGNLSWLRECLDNRVGVNGLDKA-GSTALYWACHGGHKDIVEXLFTQPNIELN 134
Query: 1352 CTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATN 1387
G T LH +A +G++ IV LLL +GA + N
Sbjct: 135 QQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRN 170
Score = 42.7 bits (99), Expect = 0.001, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Query: 1027 LHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAK-LLLQKDAPVDFQ 1085
LH AAK G L+N + K G T L+ GH + + L Q + ++ Q
Sbjct: 77 LHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEXLFTQPNIELNQQ 136
Query: 1086 GKNGVTPLHVASHYDHQNVALLLLEKGASMDI 1117
K G T LH A+ + ++ LLL KGA D+
Sbjct: 137 NKLGDTALHAAAWKGYADIVQLLLAKGARTDL 168
Score = 40.8 bits (94), Expect = 0.005, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 1/94 (1%)
Query: 993 PLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLL-ENGASLTS 1051
PLH A++ GN+ + L + V+ K TAL+ A G +++ L + L
Sbjct: 76 PLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEXLFTQPNIELNQ 135
Query: 1052 TTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQ 1085
K G T LH G+ + +LLL K A D +
Sbjct: 136 QNKLGDTALHAAAWKGYADIVQLLLAKGARTDLR 169
Score = 38.9 bits (89), Expect = 0.023, Method: Composition-based stats.
Identities = 41/154 (26%), Positives = 57/154 (37%), Gaps = 45/154 (29%)
Query: 1204 PLHIACHYGQISMARLLLDQSANVTVPKNFPSRXXXXXXXXXXXXXXYTNTTDQ-GFTPL 1262
PLH A G +S R LD V N D+ G T L
Sbjct: 76 PLHEAAKRGNLSWLRECLDNRVGV-------------------------NGLDKAGSTAL 110
Query: 1263 HHSAQQGHSTIVALLLDR-GASPNATNK-GFTPLHHSAQQGHSTIVALLLDRGASPNATN 1320
+ + GH IV L + N NK G T LH +A +G++ IV LLL +GA + N
Sbjct: 111 YWACHGGHKDIVEXLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRN 170
Query: 1321 KTRGFTPLHIACHYGQISMARLLLDQSANVSCTT 1354
+ +L D + N +C +
Sbjct: 171 IEK-----------------KLAFDXATNAACAS 187
Score = 37.7 bits (86), Expect = 0.046, Method: Composition-based stats.
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 12/101 (11%)
Query: 1059 PLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIA 1118
PLH K G++ + L V+ K G T L+ A H H+++ +
Sbjct: 76 PLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDI------------VE 123
Query: 1119 TTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGA 1159
+ + N ++ G T LH +A +G+AD+ +LL GA
Sbjct: 124 XLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGA 164
Score = 37.7 bits (86), Expect = 0.050, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Query: 36 PLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISSK 95
PLH AAK G + + L ++ + G TAL+ A GH+ ++E L Q ++
Sbjct: 76 PLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEXLFTQPNIELNQ 135
Query: 96 TKVRGFYILRS----GHEAVIEMLLEQGA 120
G L + G+ ++++LL +GA
Sbjct: 136 QNKLGDTALHAAAWKGYADIVQLLLAKGA 164
Score = 35.0 bits (79), Expect = 0.31, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 1/91 (1%)
Query: 191 LHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKH-GASIEAT 249
LH AA G+ + LD + N G T L+ AC +VE L +
Sbjct: 77 LHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEXLFTQPNIELNQQ 136
Query: 250 TEVREPMLHIACKKNRIKVVELLLKHGASIE 280
++ + LH A K +V+LLL GA +
Sbjct: 137 NKLGDTALHAAAWKGYADIVQLLLAKGARTD 167
Score = 32.7 bits (73), Expect = 1.6, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 3/97 (3%)
Query: 1130 AESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLH-LCAQEDRVGVAELLL 1188
AES+ PLH +A G+ L++ V+ K G T L+ C + V L
Sbjct: 70 AESID--NPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEXLFT 127
Query: 1189 KNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSA 1225
+ N +++ K G T LH A G + +LLL + A
Sbjct: 128 QPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGA 164
Score = 31.6 bits (70), Expect = 3.0, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 37/92 (40%), Gaps = 1/92 (1%)
Query: 223 PLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKH-GASIEA 281
PLH A K+ + + L + + + L+ AC +VE L +
Sbjct: 76 PLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEXLFTQPNIELNQ 135
Query: 282 TTEVREPMLHIACKKNRIKVVELLLKHGASIE 313
++ + LH A K +V+LLL GA +
Sbjct: 136 QNKLGDTALHAAAWKGYADIVQLLLAKGARTD 167
Score = 30.8 bits (68), Expect = 5.2, Method: Composition-based stats.
Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 2/113 (1%)
Query: 1085 QGKNGVTPL-HVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSA 1143
+G+ G+ P +VA + + L K ++ L+ N AG T L+ +
Sbjct: 55 KGRTGLIPSNYVAEQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWAC 114
Query: 1144 SEGHADMSAMLL-EHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVD 1195
GH D+ L + +++ K G T LH A + + +LLL A+ D
Sbjct: 115 HGGHKDIVEXLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTD 167
>pdb|4A63|B Chain B, Crystal Structure Of The P73-Aspp2 Complex At 2.6a
Resolution
pdb|4A63|D Chain D, Crystal Structure Of The P73-Aspp2 Complex At 2.6a
Resolution
pdb|4A63|F Chain F, Crystal Structure Of The P73-Aspp2 Complex At 2.6a
Resolution
pdb|4A63|H Chain H, Crystal Structure Of The P73-Aspp2 Complex At 2.6a
Resolution
pdb|4A63|J Chain J, Crystal Structure Of The P73-Aspp2 Complex At 2.6a
Resolution
pdb|4A63|L Chain L, Crystal Structure Of The P73-Aspp2 Complex At 2.6a
Resolution
Length = 239
Score = 48.9 bits (115), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 180 VDDVTV---DYLTALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVV 236
VDD ++ + +TALH A GH + K L+ + NA +G+TPLH A N ++V
Sbjct: 60 VDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVC 119
Query: 237 ELLLKHGASIEATT 250
+ L++ GA++ A T
Sbjct: 120 KFLVESGAAVFAMT 133
Score = 46.6 bits (109), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 39/80 (48%)
Query: 17 QKVINTINPFGSHFQHNITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARS 76
Q++I ++ IT LH A G +V L+ G N++ DG T LHCAA
Sbjct: 54 QRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASC 113
Query: 77 GHEAVIEMLLEQGAPISSKT 96
+ V + L+E GA + + T
Sbjct: 114 NNVQVCKFLVESGAAVFAMT 133
Score = 45.4 bits (106), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 5/100 (5%)
Query: 1259 FTPLH---HSAQQGHSTIVALLLDRGASPNATN-KGFTPLHHSAQQGHSTIVALLLDRGA 1314
F PL S+ +G +V ++ P+ N +G T LH++ GH+ IV L+ G
Sbjct: 35 FNPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGV 94
Query: 1315 SPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTT 1354
+ NA + + G+TPLH A + + + L++ A V T
Sbjct: 95 NVNAAD-SDGWTPLHCAASCNNVQVCKFLVESGAAVFAMT 133
Score = 45.1 bits (105), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 1128 PNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELL 1187
PN E G T LH + GH ++ L++ G +V+ A +G TPLH A + V V + L
Sbjct: 66 PNDE---GITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFL 122
Query: 1188 LKNNAQV 1194
+++ A V
Sbjct: 123 VESGAAV 129
Score = 44.7 bits (104), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 1256 DQGFTPLHHSAQQGHSTIVALLLDRGASPNATNK-GFTPLHHSAQQGHSTIVALLLDRGA 1314
D+G T LH++ GH+ IV L+ G + NA + G+TPLH +A + + L++ GA
Sbjct: 68 DEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGA 127
Query: 1315 S 1315
+
Sbjct: 128 A 128
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 36/65 (55%)
Query: 989 EQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGAS 1048
E T LH A G+ +IV L+Q G V++ D +T LH AA +V L+E+GA+
Sbjct: 69 EGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAA 128
Query: 1049 LTSTT 1053
+ + T
Sbjct: 129 VFAMT 133
Score = 41.6 bits (96), Expect = 0.003, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 1/99 (1%)
Query: 985 LRVREQQTPLHIASRL-GNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLL 1043
+RV+ L + S L G D+V ++ + TALH A G E+ L+
Sbjct: 31 MRVKFNPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLV 90
Query: 1044 ENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPV 1082
+ G ++ + G+TPLH +++V K L++ A V
Sbjct: 91 QFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAV 129
Score = 39.7 bits (91), Expect = 0.010, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 33/61 (54%)
Query: 1055 KGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGAS 1114
+G T LH GH ++ K L+Q V+ +G TPLH A+ ++ V L+E GA+
Sbjct: 69 EGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAA 128
Query: 1115 M 1115
+
Sbjct: 129 V 129
Score = 39.3 bits (90), Expect = 0.015, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 3/95 (3%)
Query: 1136 FTPLHL---SASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNA 1192
F PL L S+ EG D+ ++ D S G+T LH + + L++
Sbjct: 35 FNPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGV 94
Query: 1193 QVDTPTKKGFTPLHIACHYGQISMARLLLDQSANV 1227
V+ G+TPLH A + + + L++ A V
Sbjct: 95 NVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAV 129
Score = 38.9 bits (89), Expect = 0.021, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 1291 FTPLH---HSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQS 1347
F PL S+ +G +V ++ P+ N G T LH A G + + L+
Sbjct: 35 FNPLALLLDSSLEGEFDLVQRIIYEVDDPSLPND-EGITALHNAVCAGHTEIVKFLVQFG 93
Query: 1348 ANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGAS 1382
NV+ G+TPLH +A + + L++ GA+
Sbjct: 94 VNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAA 128
Score = 37.7 bits (86), Expect = 0.050, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 14/91 (15%)
Query: 1071 VAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNA 1130
V +++ + D P G+T LH A H +I L+++G NA
Sbjct: 53 VQRIIYEVDDP-SLPNDEGITALHNAVCAGH-------------TEIVKFLVQFGVNVNA 98
Query: 1131 ESVAGFTPLHLSASEGHADMSAMLLEHGADV 1161
G+TPLH +AS + + L+E GA V
Sbjct: 99 ADSDGWTPLHCAASCNNVQVCKFLVESGAAV 129
Score = 37.4 bits (85), Expect = 0.059, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 36/72 (50%)
Query: 212 DPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVEL 271
DP+ G T LH A ++V+ L++ G ++ A LH A N ++V +
Sbjct: 62 DPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKF 121
Query: 272 LLKHGASIEATT 283
L++ GA++ A T
Sbjct: 122 LVESGAAVFAMT 133
Score = 33.9 bits (76), Expect = 0.72, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 29/53 (54%)
Query: 1335 GQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATN 1387
G+ + + ++ + + S D+G T LH++ GH+ IV L+ G + NA +
Sbjct: 48 GEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAAD 100
Score = 32.3 bits (72), Expect = 1.9, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 28/55 (50%)
Query: 118 QGAPISSKTKVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPV 172
A + T++ L++ G ++ + G+TPLH +++V K L++ A V
Sbjct: 75 HNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAV 129
Score = 31.6 bits (70), Expect = 3.4, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 257 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 316
LH A ++V+ L++ G ++ A LH A N ++V + L++ GA++ A T
Sbjct: 74 LHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMT 133
Score = 31.6 bits (70), Expect = 3.4, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 290 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 349
LH A ++V+ L++ G ++ A LH A N ++V + L++ GA++ A T
Sbjct: 74 LHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMT 133
Score = 31.6 bits (70), Expect = 3.4, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 323 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 382
LH A ++V+ L++ G ++ A LH A N ++V + L++ GA++ A T
Sbjct: 74 LHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMT 133
Score = 31.6 bits (70), Expect = 3.4, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 356 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 415
LH A ++V+ L++ G ++ A LH A N ++V + L++ GA++ A T
Sbjct: 74 LHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMT 133
Score = 31.6 bits (70), Expect = 3.4, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 389 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 448
LH A ++V+ L++ G ++ A LH A N ++V + L++ GA++ A T
Sbjct: 74 LHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMT 133
Score = 31.6 bits (70), Expect = 3.4, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 422 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 481
LH A ++V+ L++ G ++ A LH A N ++V + L++ GA++ A T
Sbjct: 74 LHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMT 133
Score = 31.6 bits (70), Expect = 3.4, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 455 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 514
LH A ++V+ L++ G ++ A LH A N ++V + L++ GA++ A T
Sbjct: 74 LHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMT 133
Score = 31.6 bits (70), Expect = 3.4, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 488 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 547
LH A ++V+ L++ G ++ A LH A N ++V + L++ GA++ A T
Sbjct: 74 LHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMT 133
Score = 31.6 bits (70), Expect = 3.4, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 521 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 580
LH A ++V+ L++ G ++ A LH A N ++V + L++ GA++ A T
Sbjct: 74 LHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMT 133
Score = 31.6 bits (70), Expect = 3.4, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 554 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 613
LH A ++V+ L++ G ++ A LH A N ++V + L++ GA++ A T
Sbjct: 74 LHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMT 133
Score = 31.6 bits (70), Expect = 3.4, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 587 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 646
LH A ++V+ L++ G ++ A LH A N ++V + L++ GA++ A T
Sbjct: 74 LHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMT 133
Score = 31.6 bits (70), Expect = 3.4, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 620 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 679
LH A ++V+ L++ G ++ A LH A N ++V + L++ GA++ A T
Sbjct: 74 LHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMT 133
Score = 31.6 bits (70), Expect = 3.4, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 653 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 712
LH A ++V+ L++ G ++ A LH A N ++V + L++ GA++ A T
Sbjct: 74 LHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMT 133
Score = 31.6 bits (70), Expect = 3.4, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 686 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 745
LH A ++V+ L++ G ++ A LH A N ++V + L++ GA++ A T
Sbjct: 74 LHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMT 133
Score = 31.6 bits (70), Expect = 3.4, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 719 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 778
LH A ++V+ L++ G ++ A LH A N ++V + L++ GA++ A T
Sbjct: 74 LHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMT 133
Score = 31.6 bits (70), Expect = 3.4, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 752 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 811
LH A ++V+ L++ G ++ A LH A N ++V + L++ GA++ A T
Sbjct: 74 LHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMT 133
Score = 31.6 bits (70), Expect = 3.4, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 785 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 844
LH A ++V+ L++ G ++ A LH A N ++V + L++ GA++ A T
Sbjct: 74 LHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMT 133
Score = 31.6 bits (70), Expect = 3.4, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 818 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 877
LH A ++V+ L++ G ++ A LH A N ++V + L++ GA++ A T
Sbjct: 74 LHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMT 133
Score = 31.6 bits (70), Expect = 3.4, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 851 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 910
LH A ++V+ L++ G ++ A LH A N ++V + L++ GA++ A T
Sbjct: 74 LHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMT 133
Score = 30.8 bits (68), Expect = 5.0, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 8/67 (11%)
Query: 145 KGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKAPVDDVTVDYLTALHVAAHCGHARVAK 204
+G T LH GH ++ K L+Q V+ D T LH AA C + +V K
Sbjct: 69 EGITALHNAVCAGHTEIVKFLVQFGVNVNAADS--------DGWTPLHCAASCNNVQVCK 120
Query: 205 TLLDKKA 211
L++ A
Sbjct: 121 FLVESGA 127
>pdb|1YCS|B Chain B, P53-53bp2 Complex
Length = 239
Score = 48.9 bits (115), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 180 VDDVTV---DYLTALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVV 236
VDD ++ + +TALH A GH + K L+ + NA +G+TPLH A N ++V
Sbjct: 60 VDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVC 119
Query: 237 ELLLKHGASIEATT 250
+ L++ GA++ A T
Sbjct: 120 KFLVESGAAVFAMT 133
Score = 46.6 bits (109), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 39/80 (48%)
Query: 17 QKVINTINPFGSHFQHNITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARS 76
Q++I ++ IT LH A G +V L+ G N++ DG T LHCAA
Sbjct: 54 QRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASC 113
Query: 77 GHEAVIEMLLEQGAPISSKT 96
+ V + L+E GA + + T
Sbjct: 114 NNVQVCKFLVESGAAVFAMT 133
Score = 45.1 bits (105), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 1128 PNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELL 1187
PN E G T LH + GH ++ L++ G +V+ A +G TPLH A + V V + L
Sbjct: 66 PNDE---GITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFL 122
Query: 1188 LKNNAQV 1194
+++ A V
Sbjct: 123 VESGAAV 129
Score = 44.7 bits (104), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 1256 DQGFTPLHHSAQQGHSTIVALLLDRGASPNATNK-GFTPLHHSAQQGHSTIVALLLDRGA 1314
D+G T LH++ GH+ IV L+ G + NA + G+TPLH +A + + L++ GA
Sbjct: 68 DEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGA 127
Query: 1315 S 1315
+
Sbjct: 128 A 128
Score = 44.7 bits (104), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 1278 LDRGASPNATNKGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQI 1337
+D + PN ++G T LH++ GH+ IV L+ G + NA + + G+TPLH A +
Sbjct: 60 VDDPSLPN--DEGITALHNAVCAGHTEIVKFLVQFGVNVNAAD-SDGWTPLHCAASCNNV 116
Query: 1338 SMARLLLDQSANVSCTT 1354
+ + L++ A V T
Sbjct: 117 QVCKFLVESGAAVFAMT 133
Score = 42.4 bits (98), Expect = 0.002, Method: Composition-based stats.
Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 3/101 (2%)
Query: 985 LRVREQQTPLHI---ASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAV 1041
+RV+ PL + +S G D+V ++ + TALH A G E+
Sbjct: 29 MRVKFNPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKF 88
Query: 1042 LLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPV 1082
L++ G ++ + G+TPLH +++V K L++ A V
Sbjct: 89 LVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAV 129
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 36/65 (55%)
Query: 989 EQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGAS 1048
E T LH A G+ +IV L+Q G V++ D +T LH AA +V L+E+GA+
Sbjct: 69 EGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAA 128
Query: 1049 LTSTT 1053
+ + T
Sbjct: 129 VFAMT 133
Score = 39.7 bits (91), Expect = 0.010, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 33/61 (54%)
Query: 1055 KGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGAS 1114
+G T LH GH ++ K L+Q V+ +G TPLH A+ ++ V L+E GA+
Sbjct: 69 EGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAA 128
Query: 1115 M 1115
+
Sbjct: 129 V 129
Score = 38.5 bits (88), Expect = 0.029, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 5/97 (5%)
Query: 1136 FTPLHL-----SASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKN 1190
F PL L S+ EG D+ ++ D S G+T LH + + L++
Sbjct: 33 FNPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQF 92
Query: 1191 NAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANV 1227
V+ G+TPLH A + + + L++ A V
Sbjct: 93 GVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAV 129
Score = 38.1 bits (87), Expect = 0.033, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Query: 1297 SAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQ 1356
S+ +G +V ++ P+ N G T LH A G + + L+ NV+
Sbjct: 44 SSLEGEFDLVQRIIYEVDDPSLPND-EGITALHNAVCAGHTEIVKFLVQFGVNVNAADSD 102
Query: 1357 GFTPLHHSAQQGHSTIVALLLDRGAS 1382
G+TPLH +A + + L++ GA+
Sbjct: 103 GWTPLHCAASCNNVQVCKFLVESGAA 128
Score = 37.7 bits (86), Expect = 0.050, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 14/91 (15%)
Query: 1071 VAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNA 1130
V +++ + D P G+T LH A H +I L+++G NA
Sbjct: 53 VQRIIYEVDDP-SLPNDEGITALHNAVCAGH-------------TEIVKFLVQFGVNVNA 98
Query: 1131 ESVAGFTPLHLSASEGHADMSAMLLEHGADV 1161
G+TPLH +AS + + L+E GA V
Sbjct: 99 ADSDGWTPLHCAASCNNVQVCKFLVESGAAV 129
Score = 37.4 bits (85), Expect = 0.059, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 36/72 (50%)
Query: 212 DPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVEL 271
DP+ G T LH A ++V+ L++ G ++ A LH A N ++V +
Sbjct: 62 DPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKF 121
Query: 272 LLKHGASIEATT 283
L++ GA++ A T
Sbjct: 122 LVESGAAVFAMT 133
Score = 33.9 bits (76), Expect = 0.59, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 1325 FTPLHIACHY-----GQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDR 1379
F PL +A G+ + + ++ + + S D+G T LH++ GH+ IV L+
Sbjct: 33 FNPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQF 92
Query: 1380 GASPNATN 1387
G + NA +
Sbjct: 93 GVNVNAAD 100
Score = 32.3 bits (72), Expect = 1.9, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 28/55 (50%)
Query: 118 QGAPISSKTKVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPV 172
A + T++ L++ G ++ + G+TPLH +++V K L++ A V
Sbjct: 75 HNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAV 129
Score = 31.6 bits (70), Expect = 3.4, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 257 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 316
LH A ++V+ L++ G ++ A LH A N ++V + L++ GA++ A T
Sbjct: 74 LHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMT 133
Score = 31.6 bits (70), Expect = 3.4, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 290 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 349
LH A ++V+ L++ G ++ A LH A N ++V + L++ GA++ A T
Sbjct: 74 LHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMT 133
Score = 31.6 bits (70), Expect = 3.4, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 323 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 382
LH A ++V+ L++ G ++ A LH A N ++V + L++ GA++ A T
Sbjct: 74 LHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMT 133
Score = 31.6 bits (70), Expect = 3.4, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 356 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 415
LH A ++V+ L++ G ++ A LH A N ++V + L++ GA++ A T
Sbjct: 74 LHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMT 133
Score = 31.6 bits (70), Expect = 3.4, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 389 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 448
LH A ++V+ L++ G ++ A LH A N ++V + L++ GA++ A T
Sbjct: 74 LHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMT 133
Score = 31.6 bits (70), Expect = 3.4, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 422 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 481
LH A ++V+ L++ G ++ A LH A N ++V + L++ GA++ A T
Sbjct: 74 LHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMT 133
Score = 31.6 bits (70), Expect = 3.4, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 455 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 514
LH A ++V+ L++ G ++ A LH A N ++V + L++ GA++ A T
Sbjct: 74 LHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMT 133
Score = 31.6 bits (70), Expect = 3.4, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 488 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 547
LH A ++V+ L++ G ++ A LH A N ++V + L++ GA++ A T
Sbjct: 74 LHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMT 133
Score = 31.6 bits (70), Expect = 3.4, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 521 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 580
LH A ++V+ L++ G ++ A LH A N ++V + L++ GA++ A T
Sbjct: 74 LHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMT 133
Score = 31.6 bits (70), Expect = 3.4, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 554 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 613
LH A ++V+ L++ G ++ A LH A N ++V + L++ GA++ A T
Sbjct: 74 LHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMT 133
Score = 31.6 bits (70), Expect = 3.4, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 587 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 646
LH A ++V+ L++ G ++ A LH A N ++V + L++ GA++ A T
Sbjct: 74 LHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMT 133
Score = 31.6 bits (70), Expect = 3.4, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 620 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 679
LH A ++V+ L++ G ++ A LH A N ++V + L++ GA++ A T
Sbjct: 74 LHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMT 133
Score = 31.6 bits (70), Expect = 3.4, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 653 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 712
LH A ++V+ L++ G ++ A LH A N ++V + L++ GA++ A T
Sbjct: 74 LHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMT 133
Score = 31.6 bits (70), Expect = 3.4, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 686 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 745
LH A ++V+ L++ G ++ A LH A N ++V + L++ GA++ A T
Sbjct: 74 LHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMT 133
Score = 31.6 bits (70), Expect = 3.4, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 719 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 778
LH A ++V+ L++ G ++ A LH A N ++V + L++ GA++ A T
Sbjct: 74 LHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMT 133
Score = 31.6 bits (70), Expect = 3.4, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 752 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 811
LH A ++V+ L++ G ++ A LH A N ++V + L++ GA++ A T
Sbjct: 74 LHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMT 133
Score = 31.6 bits (70), Expect = 3.4, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 785 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 844
LH A ++V+ L++ G ++ A LH A N ++V + L++ GA++ A T
Sbjct: 74 LHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMT 133
Score = 31.6 bits (70), Expect = 3.4, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 818 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 877
LH A ++V+ L++ G ++ A LH A N ++V + L++ GA++ A T
Sbjct: 74 LHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMT 133
Score = 31.6 bits (70), Expect = 3.4, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 851 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 910
LH A ++V+ L++ G ++ A LH A N ++V + L++ GA++ A T
Sbjct: 74 LHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMT 133
Score = 30.8 bits (68), Expect = 5.0, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 8/67 (11%)
Query: 145 KGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKAPVDDVTVDYLTALHVAAHCGHARVAK 204
+G T LH GH ++ K L+Q V+ D T LH AA C + +V K
Sbjct: 69 EGITALHNAVCAGHTEIVKFLVQFGVNVNAADS--------DGWTPLHCAASCNNVQVCK 120
Query: 205 TLLDKKA 211
L++ A
Sbjct: 121 FLVESGA 127
>pdb|1MYO|A Chain A, Solution Structure Of Myotrophin, Nmr, 44 Structures
pdb|2MYO|A Chain A, Solution Structure Of Myotrophin, Nmr, Minimized Average
Structure
pdb|2KXP|C Chain C, Solution Nmr Structure Of V-1 Bound To Capping Protein (Cp)
Length = 118
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 54/109 (49%), Gaps = 5/109 (4%)
Query: 1001 GNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPL 1060
G++D V + G V+ T + LH AA GQ E+ LL GA + + K TPL
Sbjct: 13 GDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPL 72
Query: 1061 HLTGKY-GHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLL 1108
L+ Y GH+ KLLL K A +G +G+T L D+Q + LL
Sbjct: 73 -LSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALEAT---DNQAIKALL 117
Score = 47.0 bits (110), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 38/72 (52%)
Query: 1158 GADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMA 1217
G DV+ + G PLH A ++ + E LL A ++ P K TPL A + G +S
Sbjct: 25 GEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCV 84
Query: 1218 RLLLDQSANVTV 1229
+LLL + A+ TV
Sbjct: 85 KLLLSKGADKTV 96
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 1280 RGASPNAT-NKGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQIS 1338
+G N T G PLH++A G I+ LL +GA NA +K TPL A + G +S
Sbjct: 24 KGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHH-ITPLLSAVYEGHVS 82
Query: 1339 MARLLLDQSANVSCTTDQGFTPLHHSAQQ 1367
+LLL + A+ + G T L + Q
Sbjct: 83 CVKLLLSKGADKTVKGPDGLTALEATDNQ 111
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 1254 TTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATNK-GFTPLHHSAQQGHSTIVALLLDR 1312
T + G PLH++A G I+ LL +GA NA +K TPL + +GH + V LLL +
Sbjct: 31 TLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCVKLLLSK 90
Query: 1313 GAS 1315
GA
Sbjct: 91 GAD 93
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%)
Query: 1324 GFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGAS 1382
G PLH A GQ+ + LL + A+++ TPL + +GH + V LLL +GA
Sbjct: 35 GRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGAD 93
Score = 40.0 bits (92), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 36 PLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISSK 95
PLH AA G+ ++ LL +GA+I+ + +T L A GH + +++LL +GA + K
Sbjct: 38 PLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVK 97
Query: 96 TKVRGFYILRSGHEAVIEMLLE 117
G L + I+ LL+
Sbjct: 98 GP-DGLTALEATDNQAIKALLQ 118
Score = 40.0 bits (92), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 40/85 (47%)
Query: 1030 AAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNG 1089
A K G + + G + T + G PLH G +++ + LL K A ++ K+
Sbjct: 9 ALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHH 68
Query: 1090 VTPLHVASHYDHQNVALLLLEKGAS 1114
+TPL A + H + LLL KGA
Sbjct: 69 ITPLLSAVYEGHVSCVKLLLSKGAD 93
Score = 37.7 bits (86), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 36/80 (45%)
Query: 984 NLRVREQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLL 1043
N + + PLH A+ G ++I+ LL GA +++ K T L A EG +LL
Sbjct: 29 NRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCVKLLL 88
Query: 1044 ENGASLTSTTKKGFTPLHLT 1063
GA T G T L T
Sbjct: 89 SKGADKTVKGPDGLTALEAT 108
Score = 37.4 bits (85), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 29/55 (52%)
Query: 191 LHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGAS 245
LH AA CG + + LL K AD NA + TPL A + + V+LLL GA
Sbjct: 39 LHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGAD 93
Score = 37.0 bits (84), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 8/89 (8%)
Query: 136 GASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKAPVDDVTVDYLTALHVAA 195
G + T + G PLH G +++ + LL K A ++ K ++T L A
Sbjct: 25 GEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKH--------HITPLLSAV 76
Query: 196 HCGHARVAKTLLDKKADPNARALNGFTPL 224
+ GH K LL K AD + +G T L
Sbjct: 77 YEGHVSCVKLLLSKGADKTVKGPDGLTAL 105
Score = 37.0 bits (84), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 38/95 (40%)
Query: 1111 KGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLT 1170
K +D + G N G PLH +A G ++ LL GAD++ K+ +T
Sbjct: 11 KNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHIT 70
Query: 1171 PLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPL 1205
PL E V +LLL A G T L
Sbjct: 71 PLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAL 105
Score = 36.2 bits (82), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%)
Query: 31 QHNITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIE 83
+H+ITPL A G + V LLLS+GA+ K DGLTAL +A+++
Sbjct: 66 KHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALEATDNQAIKALLQ 118
Score = 35.8 bits (81), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 3/98 (3%)
Query: 40 AAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISSKTKVR 99
A K G + V +++G +++ G LH AA G ++E LL +GA I++ K
Sbjct: 9 ALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHH 68
Query: 100 GFYILRS---GHEAVIEMLLEQGAPISSKTKVAAVLLE 134
+L + GH + +++LL +GA + K LE
Sbjct: 69 ITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALE 106
Score = 33.1 bits (74), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 39/109 (35%), Gaps = 25/109 (22%)
Query: 1193 QVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRXXXXXXXXXXXXXXYT 1252
V+ + G PLH A GQ+ + LL + A++ P
Sbjct: 27 DVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDK-------------------- 66
Query: 1253 NTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATN-KGFTPLHHSAQQ 1300
TPL + +GH + V LLL +GA G T L + Q
Sbjct: 67 ----HHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALEATDNQ 111
Score = 32.7 bits (73), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 1335 GQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATNK 1388
G + + + + +V+ T + G PLH++A G I+ LL +GA NA +K
Sbjct: 13 GDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDK 66
>pdb|1D9S|A Chain A, Tumor Suppressor P15(Ink4b) Structure By Comparative
Modeling And Nmr Data
Length = 136
Score = 45.8 bits (107), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/116 (30%), Positives = 50/116 (43%), Gaps = 2/116 (1%)
Query: 1262 LHHSAQQGHSTIVALLLDRGASPNATNK-GFTPLHHSAQQGHSTIVALLLDRGASPNATN 1320
L +A +G V LL+ GA PNA N+ G P+ G + + LLL GA PN +
Sbjct: 16 LATAAARGQVETVRQLLEAGADPNALNRFGRRPIQ-VMMMGSAQVAELLLLHGAEPNCAD 74
Query: 1321 KTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALL 1376
P+H A G + +L A + G P+ + +QGH I L
Sbjct: 75 PATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYL 130
Score = 37.0 bits (84), Expect = 0.075, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 15/130 (11%)
Query: 1026 ALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQ 1085
L AA GQ E LLE GA + + G P+ + G +VA+LLL A +
Sbjct: 15 GLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVM-MMGSAQVAELLLLHGAEPNCA 73
Query: 1086 GKNGVT-PLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSAS 1144
+T P+H A+ + ++L GA +D+ G P+ L+
Sbjct: 74 DPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAW-------------GRLPVDLAEE 120
Query: 1145 EGHADMSAML 1154
+GH D++ L
Sbjct: 121 QGHRDIARYL 130
Score = 35.4 bits (80), Expect = 0.24, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query: 1000 LGNVDIVMLLLQHGAAVD-STTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFT 1058
+G+ + LLL HGA + + L +H AA+EG + VL GA L G
Sbjct: 54 MGSAQVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRL 113
Query: 1059 PLHLTGKYGHIKVAKLL 1075
P+ L + GH +A+ L
Sbjct: 114 PVDLAEEQGHRDIARYL 130
Score = 32.7 bits (73), Expect = 1.3, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 6/94 (6%)
Query: 190 ALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGAS---I 246
L AA G + LL+ ADPNA G P+ + + +V ELLL HGA
Sbjct: 15 GLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMMGS-AQVAELLLLHGAEPNCA 73
Query: 247 EATTEVREPMLHIACKKNRIKVVELLLKHGASIE 280
+ T R +H A ++ + + +L + GA ++
Sbjct: 74 DPATLTRP--VHDAAREGFLDTLVVLHRAGARLD 105
>pdb|2VGE|A Chain A, Crystal Structure Of The C-Terminal Region Of Human Iaspp
Length = 229
Score = 44.3 bits (103), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 39/80 (48%)
Query: 17 QKVINTINPFGSHFQHNITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARS 76
Q+ + +N + IT LH A ++V L++ GAN+++ G T LHCAA
Sbjct: 38 QQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASC 97
Query: 77 GHEAVIEMLLEQGAPISSKT 96
+ L++ GA I + T
Sbjct: 98 NDTVICMALVQHGAAIFATT 117
Score = 40.4 bits (93), Expect = 0.006, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 43/96 (44%)
Query: 188 LTALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIE 247
L L AA G V + + + DP+ G T LH A +V+ L+ GA++
Sbjct: 22 LVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVN 81
Query: 248 ATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 283
+ LH A N + L++HGA+I ATT
Sbjct: 82 SPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATT 117
Score = 40.4 bits (93), Expect = 0.008, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 1252 TNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATNK-GFTPLHHSAQQGHSTIVALLL 1310
+ ++G T LH++ + +IV L+ GA+ N+ + G+TPLH +A + I L+
Sbjct: 48 SQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALV 107
Query: 1311 DRGASPNATNKTRGFT 1326
GA+ AT + G T
Sbjct: 108 QHGAAIFATTLSDGAT 123
Score = 38.9 bits (89), Expect = 0.018, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 48/114 (42%), Gaps = 5/114 (4%)
Query: 1277 LLDRGASPNATNKG-FTPL---HHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIAC 1332
+L + SP + PL +A G +V + P+ N+ G T LH A
Sbjct: 4 VLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNE-EGITALHNAI 62
Query: 1333 HYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNAT 1386
S+ L+ ANV+ G+TPLH +A + I L+ GA+ AT
Sbjct: 63 CGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFAT 116
Score = 38.5 bits (88), Expect = 0.027, Method: Composition-based stats.
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 5/103 (4%)
Query: 1120 TLLEYGAKPNAESVAGFTPLHL---SASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCA 1176
++L P A PL L +A G ++ ++ D S + G+T LH
Sbjct: 3 SVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAI 62
Query: 1177 QEDRVGVAELLLKNNAQVDTPTKKGFTPLHIA--CHYGQISMA 1217
+ + L+ A V++P G+TPLH A C+ I MA
Sbjct: 63 CGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMA 105
Score = 37.0 bits (84), Expect = 0.085, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 40/83 (48%)
Query: 971 DVLPQCETRLNFSNLRVREQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIA 1030
+V+ Q +N + E T LH A N IV L+ GA V+S +T LH A
Sbjct: 35 EVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCA 94
Query: 1031 AKEGQEEVAAVLLENGASLTSTT 1053
A + L+++GA++ +TT
Sbjct: 95 ASCNDTVICMALVQHGAAIFATT 117
Score = 36.2 bits (82), Expect = 0.13, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 1112 GASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADV-SHAAKNGLT 1170
GA+ I L+ GA N+ G+TPLH +AS + L++HGA + + +G T
Sbjct: 64 GANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGAT 123
Query: 1171 PLHLC 1175
C
Sbjct: 124 AFEKC 128
Score = 35.4 bits (80), Expect = 0.22, Method: Composition-based stats.
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
Query: 1265 SAQQGHSTIVALLLDRGASPNATNK-GFTPLHHSAQQGHSTIVALLLDRGASPNATNKTR 1323
+A G +V + P+ N+ G T LH++ + +IV L+ GA+ N+ + +
Sbjct: 28 AALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPD-SH 86
Query: 1324 GFTPLHIACHYGQISMARLLLDQSANVSCTT 1354
G+TPLH A + L+ A + TT
Sbjct: 87 GWTPLHCAASCNDTVICMALVQHGAAIFATT 117
Score = 34.7 bits (78), Expect = 0.36, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Query: 1030 AAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNG 1089
AA G+ EV ++ + ++G T LH + + L+ A V+ +G
Sbjct: 28 AALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHG 87
Query: 1090 VTPLHVASHYDHQNVALLLLEKGASMDIATTL 1121
TPLH A+ + + + L++ GA++ ATTL
Sbjct: 88 WTPLHCAASCNDTVICMALVQHGAAI-FATTL 118
Score = 32.3 bits (72), Expect = 2.1, Method: Composition-based stats.
Identities = 32/116 (27%), Positives = 49/116 (42%), Gaps = 3/116 (2%)
Query: 204 KTLLDKKADPNA--RA-LNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIA 260
+++L K P RA LN L A ++VV+ +K E LH A
Sbjct: 2 RSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNA 61
Query: 261 CKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 316
+V+ L+ GA++ + LH A N + L++HGA+I ATT
Sbjct: 62 ICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATT 117
Score = 32.0 bits (71), Expect = 2.4, Method: Composition-based stats.
Identities = 32/137 (23%), Positives = 51/137 (37%), Gaps = 27/137 (19%)
Query: 1154 LLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTK---KGFTPLHIACH 1210
+L A + L PL L G E++ + +++ P++ +G T LH A
Sbjct: 4 VLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAIC 63
Query: 1211 YGQISMARLLLDQSANVTVPKNFPSRXXXXXXXXXXXXXXYTNTTDQGFTPLHHSAQQGH 1270
S+ L+ ANV P + G+TPLH +A
Sbjct: 64 GANYSIVDFLITAGANVNSPDS------------------------HGWTPLHCAASCND 99
Query: 1271 STIVALLLDRGASPNAT 1287
+ I L+ GA+ AT
Sbjct: 100 TVICMALVQHGAAIFAT 116
Score = 31.6 bits (70), Expect = 3.0, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 1126 AKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAE 1185
++PN E G T LH + + + L+ GA+V+ +G TPLH A + +
Sbjct: 48 SQPNEE---GITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICM 104
Query: 1186 LLLKNNAQV 1194
L+++ A +
Sbjct: 105 ALVQHGAAI 113
Score = 30.8 bits (68), Expect = 6.0, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 41/98 (41%), Gaps = 3/98 (3%)
Query: 988 REQQTPLHI---ASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLE 1044
R + PL + A+ G +++V ++ ++ TALH A + L+
Sbjct: 16 RARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLIT 75
Query: 1045 NGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPV 1082
GA++ S G+TPLH + L+Q A +
Sbjct: 76 AGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAI 113
Score = 30.8 bits (68), Expect = 6.2, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 2/114 (1%)
Query: 238 LLLKHGASIEATTEVREPMLHI--ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 295
+L K G+ +A P++ + A ++VV+ +K E LH A
Sbjct: 4 VLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAIC 63
Query: 296 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 349
+V+ L+ GA++ + LH A N + L++HGA+I ATT
Sbjct: 64 GANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATT 117
Score = 30.8 bits (68), Expect = 6.2, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 2/114 (1%)
Query: 271 LLLKHGASIEATTEVREPMLHI--ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 328
+L K G+ +A P++ + A ++VV+ +K E LH A
Sbjct: 4 VLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAIC 63
Query: 329 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 382
+V+ L+ GA++ + LH A N + L++HGA+I ATT
Sbjct: 64 GANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATT 117
Score = 30.8 bits (68), Expect = 6.2, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 2/114 (1%)
Query: 304 LLLKHGASIEATTEVREPMLHI--ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 361
+L K G+ +A P++ + A ++VV+ +K E LH A
Sbjct: 4 VLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAIC 63
Query: 362 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 415
+V+ L+ GA++ + LH A N + L++HGA+I ATT
Sbjct: 64 GANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATT 117
Score = 30.8 bits (68), Expect = 6.2, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 2/114 (1%)
Query: 337 LLLKHGASIEATTEVREPMLHI--ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 394
+L K G+ +A P++ + A ++VV+ +K E LH A
Sbjct: 4 VLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAIC 63
Query: 395 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 448
+V+ L+ GA++ + LH A N + L++HGA+I ATT
Sbjct: 64 GANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATT 117
Score = 30.8 bits (68), Expect = 6.2, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 2/114 (1%)
Query: 370 LLLKHGASIEATTEVREPMLHI--ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 427
+L K G+ +A P++ + A ++VV+ +K E LH A
Sbjct: 4 VLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAIC 63
Query: 428 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 481
+V+ L+ GA++ + LH A N + L++HGA+I ATT
Sbjct: 64 GANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATT 117
Score = 30.8 bits (68), Expect = 6.2, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 2/114 (1%)
Query: 403 LLLKHGASIEATTEVREPMLHI--ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 460
+L K G+ +A P++ + A ++VV+ +K E LH A
Sbjct: 4 VLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAIC 63
Query: 461 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 514
+V+ L+ GA++ + LH A N + L++HGA+I ATT
Sbjct: 64 GANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATT 117
Score = 30.8 bits (68), Expect = 6.2, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 2/114 (1%)
Query: 436 LLLKHGASIEATTEVREPMLHI--ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 493
+L K G+ +A P++ + A ++VV+ +K E LH A
Sbjct: 4 VLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAIC 63
Query: 494 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 547
+V+ L+ GA++ + LH A N + L++HGA+I ATT
Sbjct: 64 GANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATT 117
Score = 30.8 bits (68), Expect = 6.2, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 2/114 (1%)
Query: 469 LLLKHGASIEATTEVREPMLHI--ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 526
+L K G+ +A P++ + A ++VV+ +K E LH A
Sbjct: 4 VLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAIC 63
Query: 527 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 580
+V+ L+ GA++ + LH A N + L++HGA+I ATT
Sbjct: 64 GANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATT 117
Score = 30.8 bits (68), Expect = 6.2, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 2/114 (1%)
Query: 502 LLLKHGASIEATTEVREPMLHI--ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 559
+L K G+ +A P++ + A ++VV+ +K E LH A
Sbjct: 4 VLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAIC 63
Query: 560 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 613
+V+ L+ GA++ + LH A N + L++HGA+I ATT
Sbjct: 64 GANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATT 117
Score = 30.8 bits (68), Expect = 6.2, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 2/114 (1%)
Query: 535 LLLKHGASIEATTEVREPMLHI--ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 592
+L K G+ +A P++ + A ++VV+ +K E LH A
Sbjct: 4 VLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAIC 63
Query: 593 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 646
+V+ L+ GA++ + LH A N + L++HGA+I ATT
Sbjct: 64 GANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATT 117
Score = 30.8 bits (68), Expect = 6.2, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 2/114 (1%)
Query: 568 LLLKHGASIEATTEVREPMLHI--ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 625
+L K G+ +A P++ + A ++VV+ +K E LH A
Sbjct: 4 VLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAIC 63
Query: 626 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 679
+V+ L+ GA++ + LH A N + L++HGA+I ATT
Sbjct: 64 GANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATT 117
Score = 30.8 bits (68), Expect = 6.2, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 2/114 (1%)
Query: 601 LLLKHGASIEATTEVREPMLHI--ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 658
+L K G+ +A P++ + A ++VV+ +K E LH A
Sbjct: 4 VLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAIC 63
Query: 659 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 712
+V+ L+ GA++ + LH A N + L++HGA+I ATT
Sbjct: 64 GANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATT 117
Score = 30.8 bits (68), Expect = 6.2, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 2/114 (1%)
Query: 634 LLLKHGASIEATTEVREPMLHI--ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 691
+L K G+ +A P++ + A ++VV+ +K E LH A
Sbjct: 4 VLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAIC 63
Query: 692 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 745
+V+ L+ GA++ + LH A N + L++HGA+I ATT
Sbjct: 64 GANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATT 117
Score = 30.8 bits (68), Expect = 6.2, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 2/114 (1%)
Query: 667 LLLKHGASIEATTEVREPMLHI--ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 724
+L K G+ +A P++ + A ++VV+ +K E LH A
Sbjct: 4 VLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAIC 63
Query: 725 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 778
+V+ L+ GA++ + LH A N + L++HGA+I ATT
Sbjct: 64 GANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATT 117
Score = 30.8 bits (68), Expect = 6.2, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 2/114 (1%)
Query: 700 LLLKHGASIEATTEVREPMLHI--ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 757
+L K G+ +A P++ + A ++VV+ +K E LH A
Sbjct: 4 VLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAIC 63
Query: 758 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 811
+V+ L+ GA++ + LH A N + L++HGA+I ATT
Sbjct: 64 GANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATT 117
Score = 30.8 bits (68), Expect = 6.2, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 2/114 (1%)
Query: 733 LLLKHGASIEATTEVREPMLHI--ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 790
+L K G+ +A P++ + A ++VV+ +K E LH A
Sbjct: 4 VLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAIC 63
Query: 791 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 844
+V+ L+ GA++ + LH A N + L++HGA+I ATT
Sbjct: 64 GANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATT 117
Score = 30.8 bits (68), Expect = 6.2, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 2/114 (1%)
Query: 766 LLLKHGASIEATTEVREPMLHI--ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 823
+L K G+ +A P++ + A ++VV+ +K E LH A
Sbjct: 4 VLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAIC 63
Query: 824 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 877
+V+ L+ GA++ + LH A N + L++HGA+I ATT
Sbjct: 64 GANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATT 117
Score = 30.8 bits (68), Expect = 6.2, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 2/114 (1%)
Query: 799 LLLKHGASIEATTEVREPMLHI--ACKKNRIKVVELLLKHGASIEATTEVREPMLHIACK 856
+L K G+ +A P++ + A ++VV+ +K E LH A
Sbjct: 4 VLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAIC 63
Query: 857 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 910
+V+ L+ GA++ + LH A N + L++HGA+I ATT
Sbjct: 64 GANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATT 117
>pdb|1DCQ|A Chain A, Crystal Structure Of The Arf-Gap Domain And Ankyrin Repeats
Of Papbeta
Length = 278
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 53/118 (44%), Gaps = 11/118 (9%)
Query: 1004 DIVMLLLQHGAAVDSTTK--------DLYTALHIAAKEGQE---EVAAVLLENGASLTST 1052
DI LL + VD T K TALH+A + + L++N +L
Sbjct: 142 DIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQ 201
Query: 1053 TKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLE 1110
T KG T LH + + KLLL+ A ++ ++G TPL +A H++ LL +
Sbjct: 202 TGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQ 259
Score = 38.1 bits (87), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 42/93 (45%), Gaps = 7/93 (7%)
Query: 990 QQTPLHIASRLGNVD-----IVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLE 1044
+T LH+A R +VD IV L+Q+ +D T TALH E +LL
Sbjct: 169 DETALHLAVR--SVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLR 226
Query: 1045 NGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQ 1077
AS+ + G TPL + + H +LL Q
Sbjct: 227 GKASIEIANESGETPLDIAKRLKHEHCEELLTQ 259
Score = 37.4 bits (85), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 81/187 (43%), Gaps = 32/187 (17%)
Query: 154 GKYGHIKVAKLLLQKDAPVDFQGKAPVDDVTV--DYLTALHVAAHCGHARVAKTLLDKKA 211
G G ++ + L + PV P D+ DY+TA ++ R A+ K A
Sbjct: 77 GNAGFNEIMECCLPSEDPVK---PNPGSDMIARKDYITAKYM-----ERRYARK---KHA 125
Query: 212 DPNARALNGFTPLHIACKKNRIK-VVELLLKHGASIEATTEV--------REPMLHIACK 262
D A+ LH C+ + + + LL + ++ T ++ E LH+A +
Sbjct: 126 DTAAK-------LHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVR 178
Query: 263 ---KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVR 319
+ + +V+ L+++ +++ T LH C + + ++LLL+ ASIE E
Sbjct: 179 SVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESG 238
Query: 320 EPMLHIA 326
E L IA
Sbjct: 239 ETPLDIA 245
Score = 35.8 bits (81), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 284 EVREPMLHIACK---KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 340
E E LH+A + + + +V+ L+++ +++ T LH C + + ++LLL+
Sbjct: 167 EPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLR 226
Query: 341 HGASIEATTEVREPMLHIA 359
ASIE E E L IA
Sbjct: 227 GKASIEIANESGETPLDIA 245
Score = 35.8 bits (81), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 317 EVREPMLHIACK---KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 373
E E LH+A + + + +V+ L+++ +++ T LH C + + ++LLL+
Sbjct: 167 EPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLR 226
Query: 374 HGASIEATTEVREPMLHIA 392
ASIE E E L IA
Sbjct: 227 GKASIEIANESGETPLDIA 245
Score = 35.8 bits (81), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 350 EVREPMLHIACK---KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 406
E E LH+A + + + +V+ L+++ +++ T LH C + + ++LLL+
Sbjct: 167 EPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLR 226
Query: 407 HGASIEATTEVREPMLHIA 425
ASIE E E L IA
Sbjct: 227 GKASIEIANESGETPLDIA 245
Score = 35.8 bits (81), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 383 EVREPMLHIACK---KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 439
E E LH+A + + + +V+ L+++ +++ T LH C + + ++LLL+
Sbjct: 167 EPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLR 226
Query: 440 HGASIEATTEVREPMLHIA 458
ASIE E E L IA
Sbjct: 227 GKASIEIANESGETPLDIA 245
Score = 35.8 bits (81), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 416 EVREPMLHIACK---KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 472
E E LH+A + + + +V+ L+++ +++ T LH C + + ++LLL+
Sbjct: 167 EPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLR 226
Query: 473 HGASIEATTEVREPMLHIA 491
ASIE E E L IA
Sbjct: 227 GKASIEIANESGETPLDIA 245
Score = 35.8 bits (81), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 449 EVREPMLHIACK---KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 505
E E LH+A + + + +V+ L+++ +++ T LH C + + ++LLL+
Sbjct: 167 EPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLR 226
Query: 506 HGASIEATTEVREPMLHIA 524
ASIE E E L IA
Sbjct: 227 GKASIEIANESGETPLDIA 245
Score = 35.8 bits (81), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 482 EVREPMLHIACK---KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 538
E E LH+A + + + +V+ L+++ +++ T LH C + + ++LLL+
Sbjct: 167 EPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLR 226
Query: 539 HGASIEATTEVREPMLHIA 557
ASIE E E L IA
Sbjct: 227 GKASIEIANESGETPLDIA 245
Score = 35.8 bits (81), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 515 EVREPMLHIACK---KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 571
E E LH+A + + + +V+ L+++ +++ T LH C + + ++LLL+
Sbjct: 167 EPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLR 226
Query: 572 HGASIEATTEVREPMLHIA 590
ASIE E E L IA
Sbjct: 227 GKASIEIANESGETPLDIA 245
Score = 35.8 bits (81), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 548 EVREPMLHIACK---KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 604
E E LH+A + + + +V+ L+++ +++ T LH C + + ++LLL+
Sbjct: 167 EPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLR 226
Query: 605 HGASIEATTEVREPMLHIA 623
ASIE E E L IA
Sbjct: 227 GKASIEIANESGETPLDIA 245
Score = 35.8 bits (81), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 581 EVREPMLHIACK---KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 637
E E LH+A + + + +V+ L+++ +++ T LH C + + ++LLL+
Sbjct: 167 EPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLR 226
Query: 638 HGASIEATTEVREPMLHIA 656
ASIE E E L IA
Sbjct: 227 GKASIEIANESGETPLDIA 245
Score = 35.8 bits (81), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 614 EVREPMLHIACK---KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 670
E E LH+A + + + +V+ L+++ +++ T LH C + + ++LLL+
Sbjct: 167 EPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLR 226
Query: 671 HGASIEATTEVREPMLHIA 689
ASIE E E L IA
Sbjct: 227 GKASIEIANESGETPLDIA 245
Score = 35.8 bits (81), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 647 EVREPMLHIACK---KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 703
E E LH+A + + + +V+ L+++ +++ T LH C + + ++LLL+
Sbjct: 167 EPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLR 226
Query: 704 HGASIEATTEVREPMLHIA 722
ASIE E E L IA
Sbjct: 227 GKASIEIANESGETPLDIA 245
Score = 35.8 bits (81), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 680 EVREPMLHIACK---KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 736
E E LH+A + + + +V+ L+++ +++ T LH C + + ++LLL+
Sbjct: 167 EPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLR 226
Query: 737 HGASIEATTEVREPMLHIA 755
ASIE E E L IA
Sbjct: 227 GKASIEIANESGETPLDIA 245
Score = 35.8 bits (81), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 713 EVREPMLHIACK---KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 769
E E LH+A + + + +V+ L+++ +++ T LH C + + ++LLL+
Sbjct: 167 EPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLR 226
Query: 770 HGASIEATTEVREPMLHIA 788
ASIE E E L IA
Sbjct: 227 GKASIEIANESGETPLDIA 245
Score = 35.8 bits (81), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 746 EVREPMLHIACK---KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 802
E E LH+A + + + +V+ L+++ +++ T LH C + + ++LLL+
Sbjct: 167 EPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLR 226
Query: 803 HGASIEATTEVREPMLHIA 821
ASIE E E L IA
Sbjct: 227 GKASIEIANESGETPLDIA 245
Score = 35.8 bits (81), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 779 EVREPMLHIACK---KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 835
E E LH+A + + + +V+ L+++ +++ T LH C + + ++LLL+
Sbjct: 167 EPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLR 226
Query: 836 HGASIEATTEVREPMLHIA 854
ASIE E E L IA
Sbjct: 227 GKASIEIANESGETPLDIA 245
Score = 35.8 bits (81), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 812 EVREPMLHIACK---KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 868
E E LH+A + + + +V+ L+++ +++ T LH C + + ++LLL+
Sbjct: 167 EPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLR 226
Query: 869 HGASIEATTEVREPMLHIA 887
ASIE E E L IA
Sbjct: 227 GKASIEIANESGETPLDIA 245
Score = 35.8 bits (81), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 845 EVREPMLHIACK---KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLK 901
E E LH+A + + + +V+ L+++ +++ T LH C + + ++LLL+
Sbjct: 167 EPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLR 226
Query: 902 HGASIEATTEVREPMLHIA 920
ASIE E E L IA
Sbjct: 227 GKASIEIANESGETPLDIA 245
Score = 35.0 bits (79), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%)
Query: 1153 MLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIA 1208
L+++ ++ G T LH C D +LLL+ A ++ + G TPL IA
Sbjct: 190 FLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIA 245
Score = 32.7 bits (73), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 1170 TPLHLCAQE-DRVG--VAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSAN 1226
T LHL + DR + + L++N+ +D T KG T LH C +LLL A+
Sbjct: 171 TALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKAS 230
Query: 1227 VTV 1229
+ +
Sbjct: 231 IEI 233
>pdb|1BI7|B Chain B, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The
Structure Of The Cdk6-P16ink4a Tumor Suppressor Complex
Length = 156
Score = 44.3 bits (103), Expect = 5e-04, Method: Composition-based stats.
Identities = 34/101 (33%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Query: 1121 LLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLT-PLHLCAQED 1179
LLE GA PNA + G P+ + G A ++ +LL HGA+ + A LT P+H A+E
Sbjct: 31 LLEAGANPNAPNSYGRRPIQVMMM-GSARVAELLLLHGAEPNCADPATLTRPVHDAAREG 89
Query: 1180 RVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLL 1220
+ +L + A++D G P+ +A G +AR L
Sbjct: 90 FLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYL 130
Score = 40.4 bits (93), Expect = 0.006, Method: Composition-based stats.
Identities = 34/127 (26%), Positives = 51/127 (40%), Gaps = 2/127 (1%)
Query: 1262 LHHSAQQGHSTIVALLLDRGASPNATNK-GFTPLHHSAQQGHSTIVALLLDRGASPNATN 1320
L +A +G V LL+ GA+PNA N G P+ G + + LLL GA PN +
Sbjct: 16 LATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQ-VMMMGSARVAELLLLHGAEPNCAD 74
Query: 1321 KTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRG 1380
P+H A G + +L A + G P+ + + GH + L
Sbjct: 75 PATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAA 134
Query: 1381 ASPNATN 1387
+N
Sbjct: 135 GGTRGSN 141
Score = 35.4 bits (80), Expect = 0.23, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query: 1000 LGNVDIVMLLLQHGAAVD-STTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFT 1058
+G+ + LLL HGA + + L +H AA+EG + VL GA L G
Sbjct: 54 MGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRL 113
Query: 1059 PLHLTGKYGHIKVAKLL 1075
P+ L + GH VA+ L
Sbjct: 114 PVDLAEELGHRDVARYL 130
Score = 33.5 bits (75), Expect = 0.92, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 54/129 (41%), Gaps = 15/129 (11%)
Query: 1027 LHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQG 1086
L AA G+ E LLE GA+ + G P+ + G +VA+LLL A +
Sbjct: 16 LATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVM-MMGSARVAELLLLHGAEPNCAD 74
Query: 1087 KNGVT-PLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASE 1145
+T P+H A+ + ++L GA +D+ G P+ L+
Sbjct: 75 PATLTRPVHDAAREGFLDTLVVLHRAGARLDV-------------RDAWGRLPVDLAEEL 121
Query: 1146 GHADMSAML 1154
GH D++ L
Sbjct: 122 GHRDVARYL 130
Score = 30.8 bits (68), Expect = 5.9, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 6/93 (6%)
Query: 191 LHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGAS---IE 247
L AA G + LL+ A+PNA G P+ + + +V ELLL HGA +
Sbjct: 16 LATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGS-ARVAELLLLHGAEPNCAD 74
Query: 248 ATTEVREPMLHIACKKNRIKVVELLLKHGASIE 280
T R +H A ++ + + +L + GA ++
Sbjct: 75 PATLTRP--VHDAAREGFLDTLVVLHRAGARLD 105
>pdb|3KEA|A Chain A, Structure Function Studies Of Vaccinia Virus Host-Range
Protein K1 Reveal A Novel Ankyrin Repeat Interaction
Surface For K1s Function
pdb|3KEA|B Chain B, Structure Function Studies Of Vaccinia Virus Host-Range
Protein K1 Reveal A Novel Ankyrin Repeat Interaction
Surface For K1s Function
Length = 285
Score = 43.9 bits (102), Expect = 6e-04, Method: Composition-based stats.
Identities = 40/158 (25%), Positives = 67/158 (42%), Gaps = 19/158 (12%)
Query: 1002 NVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLH 1061
NV +V LL GA + + LH AA ++ +LL +G + KG T L+
Sbjct: 43 NVRLVCTLLNAGALKNLLENEF--PLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALY 100
Query: 1062 LTGKYGHIKVAKLLLQKDAPVDFQGKNG--VTPLHVASHYDHQNVALLLLEKGASMDIAT 1119
G+ + KL ++K+ + F GK G + H D V+ L E ++ D+A
Sbjct: 101 YAVDSGNXQTVKLFVKKNWRLXFYGKTGWKTSFYHAVXLNDVSIVSYFLSEIPSTFDLAI 160
Query: 1120 TLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEH 1157
L + +H++ GH D +LL++
Sbjct: 161 LL---------------SCIHITIKNGHVDXXILLLDY 183
Score = 38.9 bits (89), Expect = 0.021, Method: Composition-based stats.
Identities = 34/130 (26%), Positives = 54/130 (41%), Gaps = 6/130 (4%)
Query: 1261 PLHHSAQQGHSTIVALLLDRGASPNA-TNKGFTPLHHSAQQGHSTIVALLLDRGASPNAT 1319
PLH +A + IV +LL G + +KG T L+++ G+ V L + +
Sbjct: 65 PLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNXQTVKLFVKKNWRLXFY 124
Query: 1320 NKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQG--FTPLHHSAQQGHSTIVALLL 1377
KT T + A +S+ L + + T D + +H + + GH LLL
Sbjct: 125 GKTGWKTSFYHAVXLNDVSIVSYFLSE---IPSTFDLAILLSCIHITIKNGHVDXXILLL 181
Query: 1378 DRGASPNATN 1387
D S N N
Sbjct: 182 DYXTSTNTNN 191
Score = 35.0 bits (79), Expect = 0.26, Method: Composition-based stats.
Identities = 39/160 (24%), Positives = 64/160 (40%), Gaps = 27/160 (16%)
Query: 113 EMLLEQGAPISSKTKVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPV 172
E L Q A + TK+ +LL +G + KG T L+ G+ + KL ++K+ +
Sbjct: 63 EFPLHQAATLED-TKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNXQTVKLFVKKNWRL 121
Query: 173 DFQGKA----------PVDDVT-VDY--------------LTALHVAAHCGHARVAKTLL 207
F GK ++DV+ V Y L+ +H+ GH LL
Sbjct: 122 XFYGKTGWKTSFYHAVXLNDVSIVSYFLSEIPSTFDLAILLSCIHITIKNGHVDXXILLL 181
Query: 208 DKKADPNARALNGFTP-LHIACKKNRIKVVELLLKHGASI 246
D N F P + +A I+ ++ L K+ +I
Sbjct: 182 DYXTSTNTNNSLLFIPDIKLAIDNKDIEXLQALFKYDINI 221
>pdb|2ETC|A Chain A, Crystal Structure Of The Ankyrin Repeat Domain Of Trpv2
pdb|2ETC|B Chain B, Crystal Structure Of The Ankyrin Repeat Domain Of Trpv2
Length = 274
Score = 43.5 bits (101), Expect = 9e-04, Method: Composition-based stats.
Identities = 50/188 (26%), Positives = 77/188 (40%), Gaps = 50/188 (26%)
Query: 917 LHIACKKNRIKVVELLLKHGASSHVVSCYSNVKVHVSLNKIQDVSSSILRLATCDVLPQC 976
LHIA +K ++ V+LL+++GA H+ +C + H TC
Sbjct: 107 LHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKH---------------QGTC------ 145
Query: 977 ETRLNFSNLRVREQQTPLHIASRLGNVDIVMLLLQHG------AAVDSTTKDLYTALHIA 1030
F L PL +A+ D+V LL++ A DS + AL +
Sbjct: 146 ---FYFGEL-------PLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMI 195
Query: 1031 AKEGQEEVAAV------LLENGASLTSTTK-------KGFTPLHLTGKYGHIKVAKLLLQ 1077
A E A V LL+ GA L T + +G TPL L K G I++ + +LQ
Sbjct: 196 ADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQ 255
Query: 1078 KDAPVDFQ 1085
++ +Q
Sbjct: 256 REFSGPYQ 263
Score = 32.0 bits (71), Expect = 2.3, Method: Composition-based stats.
Identities = 39/162 (24%), Positives = 67/162 (41%), Gaps = 19/162 (11%)
Query: 1047 ASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVAL 1106
A T +G + LH+ + ++ KLL++ A V + H + + + L
Sbjct: 94 AQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPL 153
Query: 1107 LLLEKGASMDIATTLLEYGAKP---NAESVAGFTPLH--LSASEGHADMSAM-------L 1154
L D+ T LLE +P A G T LH + ++ + SA+ L
Sbjct: 154 SLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGL 213
Query: 1155 LEHGADVSHAAK-------NGLTPLHLCAQEDRVGVAELLLK 1189
L+ GA + + GLTPL L A+E ++ + +L+
Sbjct: 214 LQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQ 255
Score = 32.0 bits (71), Expect = 2.4, Method: Composition-based stats.
Identities = 42/154 (27%), Positives = 72/154 (46%), Gaps = 34/154 (22%)
Query: 220 GFTPLHIACKKNRIKVVELLLKHGASIEATTEVR--------------EPMLHIACKKNR 265
G + LHIA +K ++ V+LL+++GA + R P+ AC K +
Sbjct: 103 GHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTK-Q 161
Query: 266 IKVVELLLKH---GASIEATTEVREPMLH----IA--CKKNRIKVVEL---LLKHGASIE 313
VV LL++ AS+EAT + +LH IA +N V+ + LL+ GA +
Sbjct: 162 WDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLC 221
Query: 314 ATTEVREPMLH-------IACKKNRIKVVELLLK 340
T ++ E H +A K+ +I++ +L+
Sbjct: 222 PTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQ 255
Score = 30.0 bits (66), Expect = 9.7, Method: Composition-based stats.
Identities = 41/150 (27%), Positives = 70/150 (46%), Gaps = 34/150 (22%)
Query: 323 LHIACKKNRIKVVELLLKHGASIEATTEVR--------------EPMLHIACKKNRIKVV 368
LHIA +K ++ V+LL+++GA + R P+ AC K + VV
Sbjct: 107 LHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTK-QWDVV 165
Query: 369 ELLLKH---GASIEATTEVREPMLH----IA--CKKNRIKVVEL---LLKHGASIEATTE 416
LL++ AS+EAT + +LH IA +N V+ + LL+ GA + T +
Sbjct: 166 TYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQ 225
Query: 417 VREPMLH-------IACKKNRIKVVELLLK 439
+ E H +A K+ +I++ +L+
Sbjct: 226 LEEISNHQGLTPLKLAAKEGKIEIFRHILQ 255
Score = 30.0 bits (66), Expect = 9.7, Method: Composition-based stats.
Identities = 41/150 (27%), Positives = 70/150 (46%), Gaps = 34/150 (22%)
Query: 422 LHIACKKNRIKVVELLLKHGASIEATTEVR--------------EPMLHIACKKNRIKVV 467
LHIA +K ++ V+LL+++GA + R P+ AC K + VV
Sbjct: 107 LHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTK-QWDVV 165
Query: 468 ELLLKH---GASIEATTEVREPMLH----IA--CKKNRIKVVEL---LLKHGASIEATTE 515
LL++ AS+EAT + +LH IA +N V+ + LL+ GA + T +
Sbjct: 166 TYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQ 225
Query: 516 VREPMLH-------IACKKNRIKVVELLLK 538
+ E H +A K+ +I++ +L+
Sbjct: 226 LEEISNHQGLTPLKLAAKEGKIEIFRHILQ 255
Score = 30.0 bits (66), Expect = 9.7, Method: Composition-based stats.
Identities = 41/150 (27%), Positives = 70/150 (46%), Gaps = 34/150 (22%)
Query: 521 LHIACKKNRIKVVELLLKHGASIEATTEVR--------------EPMLHIACKKNRIKVV 566
LHIA +K ++ V+LL+++GA + R P+ AC K + VV
Sbjct: 107 LHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTK-QWDVV 165
Query: 567 ELLLKH---GASIEATTEVREPMLH----IA--CKKNRIKVVEL---LLKHGASIEATTE 614
LL++ AS+EAT + +LH IA +N V+ + LL+ GA + T +
Sbjct: 166 TYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQ 225
Query: 615 VREPMLH-------IACKKNRIKVVELLLK 637
+ E H +A K+ +I++ +L+
Sbjct: 226 LEEISNHQGLTPLKLAAKEGKIEIFRHILQ 255
Score = 30.0 bits (66), Expect = 9.7, Method: Composition-based stats.
Identities = 41/150 (27%), Positives = 70/150 (46%), Gaps = 34/150 (22%)
Query: 620 LHIACKKNRIKVVELLLKHGASIEATTEVR--------------EPMLHIACKKNRIKVV 665
LHIA +K ++ V+LL+++GA + R P+ AC K + VV
Sbjct: 107 LHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTK-QWDVV 165
Query: 666 ELLLKH---GASIEATTEVREPMLH----IA--CKKNRIKVVEL---LLKHGASIEATTE 713
LL++ AS+EAT + +LH IA +N V+ + LL+ GA + T +
Sbjct: 166 TYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQ 225
Query: 714 VREPMLH-------IACKKNRIKVVELLLK 736
+ E H +A K+ +I++ +L+
Sbjct: 226 LEEISNHQGLTPLKLAAKEGKIEIFRHILQ 255
Score = 30.0 bits (66), Expect = 9.7, Method: Composition-based stats.
Identities = 41/150 (27%), Positives = 70/150 (46%), Gaps = 34/150 (22%)
Query: 719 LHIACKKNRIKVVELLLKHGASIEATTEVR--------------EPMLHIACKKNRIKVV 764
LHIA +K ++ V+LL+++GA + R P+ AC K + VV
Sbjct: 107 LHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTK-QWDVV 165
Query: 765 ELLLKH---GASIEATTEVREPMLH----IA--CKKNRIKVVEL---LLKHGASIEATTE 812
LL++ AS+EAT + +LH IA +N V+ + LL+ GA + T +
Sbjct: 166 TYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQ 225
Query: 813 VREPMLH-------IACKKNRIKVVELLLK 835
+ E H +A K+ +I++ +L+
Sbjct: 226 LEEISNHQGLTPLKLAAKEGKIEIFRHILQ 255
Score = 30.0 bits (66), Expect = 9.7, Method: Composition-based stats.
Identities = 41/150 (27%), Positives = 70/150 (46%), Gaps = 34/150 (22%)
Query: 818 LHIACKKNRIKVVELLLKHGASIEATTEVR--------------EPMLHIACKKNRIKVV 863
LHIA +K ++ V+LL+++GA + R P+ AC K + VV
Sbjct: 107 LHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTK-QWDVV 165
Query: 864 ELLLKH---GASIEATTEVREPMLH----IA--CKKNRIKVVEL---LLKHGASIEATTE 911
LL++ AS+EAT + +LH IA +N V+ + LL+ GA + T +
Sbjct: 166 TYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQ 225
Query: 912 VREPMLH-------IACKKNRIKVVELLLK 934
+ E H +A K+ +I++ +L+
Sbjct: 226 LEEISNHQGLTPLKLAAKEGKIEIFRHILQ 255
>pdb|3UI2|A Chain A, Crystal Structure Of The Cpsrp54 Tail Bound To Cpsrp43
Length = 244
Score = 43.1 bits (100), Expect = 0.001, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
Query: 987 VREQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENG 1046
V E +TP A+R + + LL+ VD+ ++ TAL A G ++ +L E G
Sbjct: 42 VSEYETPWWTAARKADEQALSQLLED-RDVDAVDENGRTALLFVAGLGSDKCVRLLAEAG 100
Query: 1047 ASLT-STTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVA 1096
A L + G T LH+ Y +V + L++ A ++ + + G+T L +A
Sbjct: 101 ADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELA 151
Score = 40.4 bits (93), Expect = 0.007, Method: Composition-based stats.
Identities = 30/76 (39%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 35 TPLHVAAKWGKANMVTLLLSRGANIDNK-TRDGLTALHCAARSGHEAVIEMLLEQGAPIS 93
T L A G V LL GA++D++ R GLTALH AA V+E L+E GA I
Sbjct: 79 TALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIE 138
Query: 94 SKTKVRGFYILRSGHE 109
+ + RG L E
Sbjct: 139 VEDE-RGLTALELARE 153
Score = 40.0 bits (92), Expect = 0.010, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 1135 GFTPLHLSASEGHADMSAMLLEHGADVSHA-AKNGLTPLHLCAQEDRVGVAELLLKNNAQ 1193
G T L A G +L E GAD+ H + GLT LH+ A R V E L++ A
Sbjct: 77 GRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGAD 136
Query: 1194 VDTPTKKGFTPLHIA 1208
++ ++G T L +A
Sbjct: 137 IEVEDERGLTALELA 151
Score = 37.4 bits (85), Expect = 0.059, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 180 VDDVTVDYLTALHVAAHCGHARVAKTLLDKKADPNARALNG-FTPLHIACKKNRIKVVEL 238
VD V + TAL A G + + L + AD + R + G T LH+A R +VVE
Sbjct: 70 VDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEA 129
Query: 239 LLKHGASIEATTE 251
L++ GA IE E
Sbjct: 130 LVELGADIEVEDE 142
Score = 37.4 bits (85), Expect = 0.060, Method: Composition-based stats.
Identities = 29/102 (28%), Positives = 43/102 (42%), Gaps = 12/102 (11%)
Query: 1076 LQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAG 1135
L +D VD +NG T L + LL E GA +D + + G
Sbjct: 64 LLEDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLD------------HRDMRGG 111
Query: 1136 FTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQ 1177
T LH++A ++ L+E GAD+ + GLT L L +
Sbjct: 112 LTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELARE 153
Score = 35.4 bits (80), Expect = 0.21, Method: Composition-based stats.
Identities = 26/102 (25%), Positives = 44/102 (43%)
Query: 1260 TPLHHSAQQGHSTIVALLLDRGASPNATNKGFTPLHHSAQQGHSTIVALLLDRGASPNAT 1319
TP +A++ ++ LL+ G T L A G V LL + GA +
Sbjct: 47 TPWWTAARKADEQALSQLLEDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHR 106
Query: 1320 NKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPL 1361
+ G T LH+A Y + + L++ A++ ++G T L
Sbjct: 107 DMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTAL 148
Score = 34.7 bits (78), Expect = 0.35, Method: Composition-based stats.
Identities = 34/105 (32%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 182 DVTVDYLTALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLK 241
DV +Y T AA + LL+ + D +A NG T L K V LL +
Sbjct: 40 DVVSEYETPWWTAARKADEQALSQLLEDR-DVDAVDENGRTALLFVAGLGSDKCVRLLAE 98
Query: 242 HGASIEATTEVREPM--LHIACKKNRIKVVELLLKHGASIEATTE 284
GA ++ ++R + LH+A R +VVE L++ GA IE E
Sbjct: 99 AGADLDHR-DMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDE 142
Score = 32.7 bits (73), Expect = 1.6, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 16 SQKVINTINPFGSHFQHN-----ITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTAL 70
S K + + G+ H +T LH+AA + + +V L+ GA+I+ + GLTAL
Sbjct: 89 SDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTAL 148
Query: 71 HCA 73
A
Sbjct: 149 ELA 151
>pdb|3DEO|A Chain A, Structural Basis For Specific Substrate Recognition By The
Chloroplast Signal Recognition Particle Protein Cpsrp43
pdb|3DEP|A Chain A, Structural Basis For Specific Substrate Recognition By The
Chloroplast Signal Recognition Particle Protein Cpsrp43
Length = 183
Score = 42.7 bits (99), Expect = 0.001, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
Query: 987 VREQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENG 1046
V E +TP A+R + + LL+ VD+ ++ TAL A G ++ +L E G
Sbjct: 41 VSEYETPWWTAARKADEQALSQLLED-RDVDAVDENGRTALLFVAGLGSDKCVRLLAEAG 99
Query: 1047 ASLT-STTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVA 1096
A L + G T LH+ Y +V + L++ A ++ + + G+T L +A
Sbjct: 100 ADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELA 150
Score = 40.0 bits (92), Expect = 0.009, Method: Composition-based stats.
Identities = 30/76 (39%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 35 TPLHVAAKWGKANMVTLLLSRGANIDNK-TRDGLTALHCAARSGHEAVIEMLLEQGAPIS 93
T L A G V LL GA++D++ R GLTALH AA V+E L+E GA I
Sbjct: 78 TALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIE 137
Query: 94 SKTKVRGFYILRSGHE 109
+ + RG L E
Sbjct: 138 VEDE-RGLTALELARE 152
Score = 39.7 bits (91), Expect = 0.013, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 1135 GFTPLHLSASEGHADMSAMLLEHGADVSHA-AKNGLTPLHLCAQEDRVGVAELLLKNNAQ 1193
G T L A G +L E GAD+ H + GLT LH+ A R V E L++ A
Sbjct: 76 GRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGAD 135
Query: 1194 VDTPTKKGFTPLHIA 1208
++ ++G T L +A
Sbjct: 136 IEVEDERGLTALELA 150
Score = 37.0 bits (84), Expect = 0.073, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 180 VDDVTVDYLTALHVAAHCGHARVAKTLLDKKADPNARALNG-FTPLHIACKKNRIKVVEL 238
VD V + TAL A G + + L + AD + R + G T LH+A R +VVE
Sbjct: 69 VDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEA 128
Query: 239 LLKHGASIEATTE 251
L++ GA IE E
Sbjct: 129 LVELGADIEVEDE 141
Score = 37.0 bits (84), Expect = 0.080, Method: Composition-based stats.
Identities = 29/102 (28%), Positives = 43/102 (42%), Gaps = 12/102 (11%)
Query: 1076 LQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAG 1135
L +D VD +NG T L + LL E GA +D + + G
Sbjct: 63 LLEDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLD------------HRDMRGG 110
Query: 1136 FTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQ 1177
T LH++A ++ L+E GAD+ + GLT L L +
Sbjct: 111 LTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELARE 152
Score = 35.0 bits (79), Expect = 0.27, Method: Composition-based stats.
Identities = 26/102 (25%), Positives = 44/102 (43%)
Query: 1260 TPLHHSAQQGHSTIVALLLDRGASPNATNKGFTPLHHSAQQGHSTIVALLLDRGASPNAT 1319
TP +A++ ++ LL+ G T L A G V LL + GA +
Sbjct: 46 TPWWTAARKADEQALSQLLEDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHR 105
Query: 1320 NKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPL 1361
+ G T LH+A Y + + L++ A++ ++G T L
Sbjct: 106 DMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTAL 147
Score = 34.3 bits (77), Expect = 0.50, Method: Composition-based stats.
Identities = 34/105 (32%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 182 DVTVDYLTALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLK 241
DV +Y T AA + LL+ + D +A NG T L K V LL +
Sbjct: 39 DVVSEYETPWWTAARKADEQALSQLLEDR-DVDAVDENGRTALLFVAGLGSDKCVRLLAE 97
Query: 242 HGASIEATTEVREPM--LHIACKKNRIKVVELLLKHGASIEATTE 284
GA ++ ++R + LH+A R +VVE L++ GA IE E
Sbjct: 98 AGADLDHR-DMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDE 141
Score = 32.3 bits (72), Expect = 2.0, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 16 SQKVINTINPFGSHFQHN-----ITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTAL 70
S K + + G+ H +T LH+AA + + +V L+ GA+I+ + GLTAL
Sbjct: 88 SDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTAL 147
Query: 71 HCA 73
A
Sbjct: 148 ELA 150
>pdb|2ETA|A Chain A, Crystal Structure Of The Ankyrin Repeat Domain Of The Trpv2
pdb|2ETA|B Chain B, Crystal Structure Of The Ankyrin Repeat Domain Of The Trpv2
pdb|2ETB|A Chain A, Crystal Structure Of The Ankyrin Repeat Domain Of Trpv2
Length = 256
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 75/182 (41%), Gaps = 50/182 (27%)
Query: 917 LHIACKKNRIKVVELLLKHGASSHVVSCYSNVKVHVSLNKIQDVSSSILRLATCDVLPQC 976
LHIA +K ++ V+LL+++GA H+ +C + H TC
Sbjct: 94 LHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQ---------------GTC------ 132
Query: 977 ETRLNFSNLRVREQQTPLHIASRLGNVDIVMLLLQHG------AAVDSTTKDLYTALHIA 1030
F L PL +A+ D+V LL++ A DS + AL +
Sbjct: 133 ---FYFGEL-------PLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMI 182
Query: 1031 AKEGQEEVAAV------LLENGASLTSTTK-------KGFTPLHLTGKYGHIKVAKLLLQ 1077
A E A V LL+ GA L T + +G TPL L K G I++ + +LQ
Sbjct: 183 ADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQ 242
Query: 1078 KD 1079
++
Sbjct: 243 RE 244
Score = 32.0 bits (71), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 79/174 (45%), Gaps = 41/174 (23%)
Query: 220 GFTPLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHI-ACKKNRIKVVELLLKHGAS 278
G + LHIA +K ++ V+LL+++GA + H+ AC + KH +
Sbjct: 90 GHSALHIAIEKRSLQCVKLLVENGADV-----------HLRACGR-------FFQKHQGT 131
Query: 279 IEATTEVREPMLHIACKKNRIKVVELLLKH---GASIEATTEVREPMLH--IACKKNR-- 331
E+ P+ AC K + VV LL++ AS+EAT + +LH + N
Sbjct: 132 CFYFGEL--PLSLAACTK-QWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPE 188
Query: 332 -----IKVVELLLKHGASIEATTEVREPMLH-------IACKKNRIKVVELLLK 373
I + + LL+ GA + T ++ E H +A K+ +I++ +L+
Sbjct: 189 NSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQ 242
Score = 30.4 bits (67), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 77/170 (45%), Gaps = 41/170 (24%)
Query: 323 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHI-ACKKNRIKVVELLLKHGASIEAT 381
LHIA +K ++ V+LL+++GA + H+ AC + KH +
Sbjct: 94 LHIAIEKRSLQCVKLLVENGADV-----------HLRACGR-------FFQKHQGTCFYF 135
Query: 382 TEVREPMLHIACKKNRIKVVELLLKH---GASIEATTEVREPMLH--IACKKNR------ 430
E+ P+ AC K + VV LL++ AS+EAT + +LH + N
Sbjct: 136 GEL--PLSLAACTK-QWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSAL 192
Query: 431 -IKVVELLLKHGASIEATTEVREPMLH-------IACKKNRIKVVELLLK 472
I + + LL+ GA + T ++ E H +A K+ +I++ +L+
Sbjct: 193 VIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQ 242
Score = 30.4 bits (67), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 77/170 (45%), Gaps = 41/170 (24%)
Query: 422 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHI-ACKKNRIKVVELLLKHGASIEAT 480
LHIA +K ++ V+LL+++GA + H+ AC + KH +
Sbjct: 94 LHIAIEKRSLQCVKLLVENGADV-----------HLRACGR-------FFQKHQGTCFYF 135
Query: 481 TEVREPMLHIACKKNRIKVVELLLKH---GASIEATTEVREPMLH--IACKKNR------ 529
E+ P+ AC K + VV LL++ AS+EAT + +LH + N
Sbjct: 136 GEL--PLSLAACTK-QWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSAL 192
Query: 530 -IKVVELLLKHGASIEATTEVREPMLH-------IACKKNRIKVVELLLK 571
I + + LL+ GA + T ++ E H +A K+ +I++ +L+
Sbjct: 193 VIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQ 242
Score = 30.4 bits (67), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 77/170 (45%), Gaps = 41/170 (24%)
Query: 521 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHI-ACKKNRIKVVELLLKHGASIEAT 579
LHIA +K ++ V+LL+++GA + H+ AC + KH +
Sbjct: 94 LHIAIEKRSLQCVKLLVENGADV-----------HLRACGR-------FFQKHQGTCFYF 135
Query: 580 TEVREPMLHIACKKNRIKVVELLLKH---GASIEATTEVREPMLH--IACKKNR------ 628
E+ P+ AC K + VV LL++ AS+EAT + +LH + N
Sbjct: 136 GEL--PLSLAACTK-QWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSAL 192
Query: 629 -IKVVELLLKHGASIEATTEVREPMLH-------IACKKNRIKVVELLLK 670
I + + LL+ GA + T ++ E H +A K+ +I++ +L+
Sbjct: 193 VIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQ 242
Score = 30.4 bits (67), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 77/170 (45%), Gaps = 41/170 (24%)
Query: 620 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHI-ACKKNRIKVVELLLKHGASIEAT 678
LHIA +K ++ V+LL+++GA + H+ AC + KH +
Sbjct: 94 LHIAIEKRSLQCVKLLVENGADV-----------HLRACGR-------FFQKHQGTCFYF 135
Query: 679 TEVREPMLHIACKKNRIKVVELLLKH---GASIEATTEVREPMLH--IACKKNR------ 727
E+ P+ AC K + VV LL++ AS+EAT + +LH + N
Sbjct: 136 GEL--PLSLAACTK-QWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSAL 192
Query: 728 -IKVVELLLKHGASIEATTEVREPMLH-------IACKKNRIKVVELLLK 769
I + + LL+ GA + T ++ E H +A K+ +I++ +L+
Sbjct: 193 VIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQ 242
Score = 30.4 bits (67), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 77/170 (45%), Gaps = 41/170 (24%)
Query: 719 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHI-ACKKNRIKVVELLLKHGASIEAT 777
LHIA +K ++ V+LL+++GA + H+ AC + KH +
Sbjct: 94 LHIAIEKRSLQCVKLLVENGADV-----------HLRACGR-------FFQKHQGTCFYF 135
Query: 778 TEVREPMLHIACKKNRIKVVELLLKH---GASIEATTEVREPMLH--IACKKNR------ 826
E+ P+ AC K + VV LL++ AS+EAT + +LH + N
Sbjct: 136 GEL--PLSLAACTK-QWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSAL 192
Query: 827 -IKVVELLLKHGASIEATTEVREPMLH-------IACKKNRIKVVELLLK 868
I + + LL+ GA + T ++ E H +A K+ +I++ +L+
Sbjct: 193 VIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQ 242
>pdb|1YMP|A Chain A, The Crystal Structure Of A Partial Mouse Notch-1 Ankyrin
Domain: Repeats 4 Through 7 Preserve An Ankyrin Fold
pdb|1YMP|B Chain B, The Crystal Structure Of A Partial Mouse Notch-1 Ankyrin
Domain: Repeats 4 Through 7 Preserve An Ankyrin Fold
Length = 135
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 59/125 (47%)
Query: 986 RVREQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLEN 1045
R+ + TPL +A+RL ++ L+ A V++ +ALH AA + A VLL+N
Sbjct: 11 RMHDGTTPLILAARLALEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKN 70
Query: 1046 GASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVA 1105
GA+ K TPL L + G + AK+LL A D P +A H ++
Sbjct: 71 GANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIV 130
Query: 1106 LLLLE 1110
LL E
Sbjct: 131 RLLDE 135
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 45/95 (47%)
Query: 1135 GFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQV 1194
G TPL L+A M L+ ADV+ G + LH A + V A +LLKN A
Sbjct: 15 GTTPLILAARLALEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANK 74
Query: 1195 DTPTKKGFTPLHIACHYGQISMARLLLDQSANVTV 1229
D K TPL +A G A++LLD AN +
Sbjct: 75 DMQNNKEETPLFLAAREGSYETAKVLLDHFANRDI 109
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 65/133 (48%)
Query: 206 LLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNR 265
L ++ D +AR +G TPL +A + ++E L+ A + A ++ + LH A N
Sbjct: 1 LRNRATDLDARMHDGTTPLILAARLALEGMLEDLINSHADVNAVDDLGKSALHWAAAVNN 60
Query: 266 IKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHI 325
+ +LLK+GA+ + E L +A ++ + ++LL H A+ + T + I
Sbjct: 61 VDAAVVLLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDI 120
Query: 326 ACKKNRIKVVELL 338
A ++ +V LL
Sbjct: 121 AQERMHHDIVRLL 133
Score = 39.3 bits (90), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 2/121 (1%)
Query: 1257 QGFTPLHHSAQQGHSTIVALLLDRGASPNATNK-GFTPLHHSAQQGHSTIVALLLDRGAS 1315
G TPL +A+ ++ L++ A NA + G + LH +A + +LL GA+
Sbjct: 14 DGTTPLILAARLALEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGAN 73
Query: 1316 PNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVAL 1375
+ N + TPL +A G A++LLD AN T P + ++ H IV L
Sbjct: 74 KDMQN-NKEETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRL 132
Query: 1376 L 1376
L
Sbjct: 133 L 133
Score = 36.2 bits (82), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 52/116 (44%), Gaps = 14/116 (12%)
Query: 52 LLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISSKTKVRGFYILRSGHEAV 111
L +R ++D + DG T L AAR E ++E L+ A +++ + G A+
Sbjct: 1 LRNRATDLDARMHDGTTPLILAARLALEGMLEDLINSHADVNAVDDL--------GKSAL 52
Query: 112 IEMLLEQGAPISSKTKVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQ 167
A + A VLL+NGA+ K TPL L + G + AK+LL
Sbjct: 53 ------HWAAAVNNVDAAVVLLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLD 102
Score = 31.6 bits (70), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 56/120 (46%)
Query: 186 DYLTALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGAS 245
D T L +AA + + L++ AD NA G + LH A N + +LLK+GA+
Sbjct: 14 DGTTPLILAARLALEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGAN 73
Query: 246 IEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 305
+ E L +A ++ + ++LL H A+ + T + IA ++ +V LL
Sbjct: 74 KDMQNNKEETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLL 133
Score = 31.2 bits (69), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 50/104 (48%)
Query: 268 VVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIAC 327
++E L+ A + A ++ + LH A N + +LLK+GA+ + E L +A
Sbjct: 30 MLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNKEETPLFLAA 89
Query: 328 KKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 371
++ + ++LL H A+ + T + IA ++ +V LL
Sbjct: 90 REGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLL 133
Score = 31.2 bits (69), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 50/104 (48%)
Query: 301 VVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIAC 360
++E L+ A + A ++ + LH A N + +LLK+GA+ + E L +A
Sbjct: 30 MLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNKEETPLFLAA 89
Query: 361 KKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 404
++ + ++LL H A+ + T + IA ++ +V LL
Sbjct: 90 REGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLL 133
Score = 31.2 bits (69), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 50/104 (48%)
Query: 334 VVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIAC 393
++E L+ A + A ++ + LH A N + +LLK+GA+ + E L +A
Sbjct: 30 MLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNKEETPLFLAA 89
Query: 394 KKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 437
++ + ++LL H A+ + T + IA ++ +V LL
Sbjct: 90 REGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLL 133
Score = 31.2 bits (69), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 50/104 (48%)
Query: 367 VVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIAC 426
++E L+ A + A ++ + LH A N + +LLK+GA+ + E L +A
Sbjct: 30 MLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNKEETPLFLAA 89
Query: 427 KKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 470
++ + ++LL H A+ + T + IA ++ +V LL
Sbjct: 90 REGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLL 133
Score = 31.2 bits (69), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 50/104 (48%)
Query: 400 VVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIAC 459
++E L+ A + A ++ + LH A N + +LLK+GA+ + E L +A
Sbjct: 30 MLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNKEETPLFLAA 89
Query: 460 KKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 503
++ + ++LL H A+ + T + IA ++ +V LL
Sbjct: 90 REGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLL 133
Score = 31.2 bits (69), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 50/104 (48%)
Query: 433 VVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIAC 492
++E L+ A + A ++ + LH A N + +LLK+GA+ + E L +A
Sbjct: 30 MLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNKEETPLFLAA 89
Query: 493 KKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 536
++ + ++LL H A+ + T + IA ++ +V LL
Sbjct: 90 REGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLL 133
Score = 31.2 bits (69), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 50/104 (48%)
Query: 466 VVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIAC 525
++E L+ A + A ++ + LH A N + +LLK+GA+ + E L +A
Sbjct: 30 MLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNKEETPLFLAA 89
Query: 526 KKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 569
++ + ++LL H A+ + T + IA ++ +V LL
Sbjct: 90 REGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLL 133
Score = 31.2 bits (69), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 50/104 (48%)
Query: 499 VVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIAC 558
++E L+ A + A ++ + LH A N + +LLK+GA+ + E L +A
Sbjct: 30 MLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNKEETPLFLAA 89
Query: 559 KKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 602
++ + ++LL H A+ + T + IA ++ +V LL
Sbjct: 90 REGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLL 133
Score = 31.2 bits (69), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 50/104 (48%)
Query: 532 VVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIAC 591
++E L+ A + A ++ + LH A N + +LLK+GA+ + E L +A
Sbjct: 30 MLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNKEETPLFLAA 89
Query: 592 KKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 635
++ + ++LL H A+ + T + IA ++ +V LL
Sbjct: 90 REGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLL 133
Score = 31.2 bits (69), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 50/104 (48%)
Query: 565 VVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIAC 624
++E L+ A + A ++ + LH A N + +LLK+GA+ + E L +A
Sbjct: 30 MLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNKEETPLFLAA 89
Query: 625 KKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 668
++ + ++LL H A+ + T + IA ++ +V LL
Sbjct: 90 REGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLL 133
Score = 31.2 bits (69), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 50/104 (48%)
Query: 598 VVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIAC 657
++E L+ A + A ++ + LH A N + +LLK+GA+ + E L +A
Sbjct: 30 MLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNKEETPLFLAA 89
Query: 658 KKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 701
++ + ++LL H A+ + T + IA ++ +V LL
Sbjct: 90 REGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLL 133
Score = 31.2 bits (69), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 50/104 (48%)
Query: 631 VVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIAC 690
++E L+ A + A ++ + LH A N + +LLK+GA+ + E L +A
Sbjct: 30 MLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNKEETPLFLAA 89
Query: 691 KKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 734
++ + ++LL H A+ + T + IA ++ +V LL
Sbjct: 90 REGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLL 133
Score = 31.2 bits (69), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 50/104 (48%)
Query: 664 VVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIAC 723
++E L+ A + A ++ + LH A N + +LLK+GA+ + E L +A
Sbjct: 30 MLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNKEETPLFLAA 89
Query: 724 KKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 767
++ + ++LL H A+ + T + IA ++ +V LL
Sbjct: 90 REGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLL 133
Score = 31.2 bits (69), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 50/104 (48%)
Query: 697 VVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIAC 756
++E L+ A + A ++ + LH A N + +LLK+GA+ + E L +A
Sbjct: 30 MLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNKEETPLFLAA 89
Query: 757 KKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 800
++ + ++LL H A+ + T + IA ++ +V LL
Sbjct: 90 REGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLL 133
Score = 31.2 bits (69), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 50/104 (48%)
Query: 730 VVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIAC 789
++E L+ A + A ++ + LH A N + +LLK+GA+ + E L +A
Sbjct: 30 MLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNKEETPLFLAA 89
Query: 790 KKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 833
++ + ++LL H A+ + T + IA ++ +V LL
Sbjct: 90 REGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLL 133
Score = 31.2 bits (69), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 50/104 (48%)
Query: 763 VVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIAC 822
++E L+ A + A ++ + LH A N + +LLK+GA+ + E L +A
Sbjct: 30 MLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNKEETPLFLAA 89
Query: 823 KKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 866
++ + ++LL H A+ + T + IA ++ +V LL
Sbjct: 90 REGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLL 133
Score = 31.2 bits (69), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 50/104 (48%)
Query: 796 VVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIAC 855
++E L+ A + A ++ + LH A N + +LLK+GA+ + E L +A
Sbjct: 30 MLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNKEETPLFLAA 89
Query: 856 KKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 899
++ + ++LL H A+ + T + IA ++ +V LL
Sbjct: 90 REGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLL 133
Score = 31.2 bits (69), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 50/104 (48%)
Query: 829 VVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIAC 888
++E L+ A + A ++ + LH A N + +LLK+GA+ + E L +A
Sbjct: 30 MLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNKEETPLFLAA 89
Query: 889 KKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 932
++ + ++LL H A+ + T + IA ++ +V LL
Sbjct: 90 REGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLL 133
Score = 30.0 bits (66), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 47/102 (46%)
Query: 1016 VDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLL 1075
+D+ D T L +AA+ E + L+ + A + + G + LH ++ A +L
Sbjct: 8 LDARMHDGTTPLILAARLALEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVL 67
Query: 1076 LQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDI 1117
L+ A D Q TPL +A+ A +LL+ A+ DI
Sbjct: 68 LKNGANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANRDI 109
>pdb|2B0O|E Chain E, Crystal Structure Of Uplc1 Gap Domain
pdb|2B0O|F Chain F, Crystal Structure Of Uplc1 Gap Domain
pdb|2B0O|G Chain G, Crystal Structure Of Uplc1 Gap Domain
pdb|2B0O|H Chain H, Crystal Structure Of Uplc1 Gap Domain
Length = 301
Score = 42.4 bits (98), Expect = 0.002, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 990 QQTPLHIASRLGN---VDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENG 1046
++ LH+A ++ N + +V ++Q+G +D+ D TALH AA Q + +LL+
Sbjct: 190 EELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGR 249
Query: 1047 ASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHV 1095
A + + + G T L + K H + +LL Q Q PLHV
Sbjct: 250 ALVGTVNEAGETALDIARKKHHKECEELLEQA------QAGTFAFPLHV 292
Score = 37.0 bits (84), Expect = 0.073, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Query: 848 EPMLHIACK---KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 904
E +LH+A K + + +V+ ++++G ++A LH A N+ ++LLLK A
Sbjct: 191 ELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRA 250
Query: 905 SIEATTEVREPMLHIACKKNRIKVVELLLKHGASS 939
+ E E L IA KK+ + ELL + A +
Sbjct: 251 LVGTVNEAGETALDIARKKHHKECEELLEQAQAGT 285
Score = 37.0 bits (84), Expect = 0.074, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 254 EPMLHIACK---KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 310
E +LH+A K + + +V+ ++++G ++A LH A N+ ++LLLK A
Sbjct: 191 ELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRA 250
Query: 311 SIEATTEVREPMLHIACKKNRIKVVELL 338
+ E E L IA KK+ + ELL
Sbjct: 251 LVGTVNEAGETALDIARKKHHKECEELL 278
Score = 37.0 bits (84), Expect = 0.074, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 287 EPMLHIACK---KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 343
E +LH+A K + + +V+ ++++G ++A LH A N+ ++LLLK A
Sbjct: 191 ELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRA 250
Query: 344 SIEATTEVREPMLHIACKKNRIKVVELL 371
+ E E L IA KK+ + ELL
Sbjct: 251 LVGTVNEAGETALDIARKKHHKECEELL 278
Score = 37.0 bits (84), Expect = 0.074, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 320 EPMLHIACK---KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 376
E +LH+A K + + +V+ ++++G ++A LH A N+ ++LLLK A
Sbjct: 191 ELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRA 250
Query: 377 SIEATTEVREPMLHIACKKNRIKVVELL 404
+ E E L IA KK+ + ELL
Sbjct: 251 LVGTVNEAGETALDIARKKHHKECEELL 278
Score = 37.0 bits (84), Expect = 0.074, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 353 EPMLHIACK---KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 409
E +LH+A K + + +V+ ++++G ++A LH A N+ ++LLLK A
Sbjct: 191 ELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRA 250
Query: 410 SIEATTEVREPMLHIACKKNRIKVVELL 437
+ E E L IA KK+ + ELL
Sbjct: 251 LVGTVNEAGETALDIARKKHHKECEELL 278
Score = 37.0 bits (84), Expect = 0.074, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 386 EPMLHIACK---KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 442
E +LH+A K + + +V+ ++++G ++A LH A N+ ++LLLK A
Sbjct: 191 ELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRA 250
Query: 443 SIEATTEVREPMLHIACKKNRIKVVELL 470
+ E E L IA KK+ + ELL
Sbjct: 251 LVGTVNEAGETALDIARKKHHKECEELL 278
Score = 37.0 bits (84), Expect = 0.074, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 419 EPMLHIACK---KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 475
E +LH+A K + + +V+ ++++G ++A LH A N+ ++LLLK A
Sbjct: 191 ELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRA 250
Query: 476 SIEATTEVREPMLHIACKKNRIKVVELL 503
+ E E L IA KK+ + ELL
Sbjct: 251 LVGTVNEAGETALDIARKKHHKECEELL 278
Score = 37.0 bits (84), Expect = 0.074, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 452 EPMLHIACK---KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 508
E +LH+A K + + +V+ ++++G ++A LH A N+ ++LLLK A
Sbjct: 191 ELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRA 250
Query: 509 SIEATTEVREPMLHIACKKNRIKVVELL 536
+ E E L IA KK+ + ELL
Sbjct: 251 LVGTVNEAGETALDIARKKHHKECEELL 278
Score = 37.0 bits (84), Expect = 0.074, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 485 EPMLHIACK---KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 541
E +LH+A K + + +V+ ++++G ++A LH A N+ ++LLLK A
Sbjct: 191 ELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRA 250
Query: 542 SIEATTEVREPMLHIACKKNRIKVVELL 569
+ E E L IA KK+ + ELL
Sbjct: 251 LVGTVNEAGETALDIARKKHHKECEELL 278
Score = 37.0 bits (84), Expect = 0.074, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 518 EPMLHIACK---KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 574
E +LH+A K + + +V+ ++++G ++A LH A N+ ++LLLK A
Sbjct: 191 ELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRA 250
Query: 575 SIEATTEVREPMLHIACKKNRIKVVELL 602
+ E E L IA KK+ + ELL
Sbjct: 251 LVGTVNEAGETALDIARKKHHKECEELL 278
Score = 37.0 bits (84), Expect = 0.074, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 551 EPMLHIACK---KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 607
E +LH+A K + + +V+ ++++G ++A LH A N+ ++LLLK A
Sbjct: 191 ELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRA 250
Query: 608 SIEATTEVREPMLHIACKKNRIKVVELL 635
+ E E L IA KK+ + ELL
Sbjct: 251 LVGTVNEAGETALDIARKKHHKECEELL 278
Score = 37.0 bits (84), Expect = 0.074, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 584 EPMLHIACK---KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 640
E +LH+A K + + +V+ ++++G ++A LH A N+ ++LLLK A
Sbjct: 191 ELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRA 250
Query: 641 SIEATTEVREPMLHIACKKNRIKVVELL 668
+ E E L IA KK+ + ELL
Sbjct: 251 LVGTVNEAGETALDIARKKHHKECEELL 278
Score = 37.0 bits (84), Expect = 0.074, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 617 EPMLHIACK---KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 673
E +LH+A K + + +V+ ++++G ++A LH A N+ ++LLLK A
Sbjct: 191 ELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRA 250
Query: 674 SIEATTEVREPMLHIACKKNRIKVVELL 701
+ E E L IA KK+ + ELL
Sbjct: 251 LVGTVNEAGETALDIARKKHHKECEELL 278
Score = 37.0 bits (84), Expect = 0.074, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 650 EPMLHIACK---KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 706
E +LH+A K + + +V+ ++++G ++A LH A N+ ++LLLK A
Sbjct: 191 ELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRA 250
Query: 707 SIEATTEVREPMLHIACKKNRIKVVELL 734
+ E E L IA KK+ + ELL
Sbjct: 251 LVGTVNEAGETALDIARKKHHKECEELL 278
Score = 37.0 bits (84), Expect = 0.074, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 683 EPMLHIACK---KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 739
E +LH+A K + + +V+ ++++G ++A LH A N+ ++LLLK A
Sbjct: 191 ELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRA 250
Query: 740 SIEATTEVREPMLHIACKKNRIKVVELL 767
+ E E L IA KK+ + ELL
Sbjct: 251 LVGTVNEAGETALDIARKKHHKECEELL 278
Score = 37.0 bits (84), Expect = 0.074, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 716 EPMLHIACK---KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 772
E +LH+A K + + +V+ ++++G ++A LH A N+ ++LLLK A
Sbjct: 191 ELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRA 250
Query: 773 SIEATTEVREPMLHIACKKNRIKVVELL 800
+ E E L IA KK+ + ELL
Sbjct: 251 LVGTVNEAGETALDIARKKHHKECEELL 278
Score = 37.0 bits (84), Expect = 0.074, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 749 EPMLHIACK---KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 805
E +LH+A K + + +V+ ++++G ++A LH A N+ ++LLLK A
Sbjct: 191 ELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRA 250
Query: 806 SIEATTEVREPMLHIACKKNRIKVVELL 833
+ E E L IA KK+ + ELL
Sbjct: 251 LVGTVNEAGETALDIARKKHHKECEELL 278
Score = 37.0 bits (84), Expect = 0.074, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 782 EPMLHIACK---KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 838
E +LH+A K + + +V+ ++++G ++A LH A N+ ++LLLK A
Sbjct: 191 ELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRA 250
Query: 839 SIEATTEVREPMLHIACKKNRIKVVELL 866
+ E E L IA KK+ + ELL
Sbjct: 251 LVGTVNEAGETALDIARKKHHKECEELL 278
Score = 37.0 bits (84), Expect = 0.074, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 815 EPMLHIACK---KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 871
E +LH+A K + + +V+ ++++G ++A LH A N+ ++LLLK A
Sbjct: 191 ELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRA 250
Query: 872 SIEATTEVREPMLHIACKKNRIKVVELL 899
+ E E L IA KK+ + ELL
Sbjct: 251 LVGTVNEAGETALDIARKKHHKECEELL 278
Score = 36.6 bits (83), Expect = 0.11, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
Query: 213 PNARALNGFTPLHIACK---KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 269
P+A+A LH+A K + + +V+ ++++G ++A LH A N+ +
Sbjct: 184 PDAQAPEELV-LHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCL 242
Query: 270 ELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 305
+LLLK A + E E L IA KK+ + ELL
Sbjct: 243 KLLLKGRALVGTVNEAGETALDIARKKHHKECEELL 278
Score = 35.8 bits (81), Expect = 0.18, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Query: 37 LHVAAKWGKAN---MVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPIS 93
LH+A K +V ++ G ++D K DG TALH AA +++LL+ A +
Sbjct: 194 LHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVG 253
Query: 94 SKTKV--RGFYILRSGHEAVIEMLLEQG 119
+ + I R H E LLEQ
Sbjct: 254 TVNEAGETALDIARKKHHKECEELLEQA 281
Score = 35.0 bits (79), Expect = 0.33, Method: Composition-based stats.
Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 3/103 (2%)
Query: 173 DFQGKAPVDDVTVDYLTALHVA---AHCGHARVAKTLLDKKADPNARALNGFTPLHIACK 229
DF P D LH+A A+ + ++ +A+A +G T LH A
Sbjct: 176 DFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAAL 235
Query: 230 KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 272
N+ ++LLLK A + E E L IA KK+ + ELL
Sbjct: 236 YNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELL 278
Score = 34.3 bits (77), Expect = 0.47, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 3/90 (3%)
Query: 1027 LHIAAKEGQEE---VAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVD 1083
LH+A K + + +++NG L + G T LH Y KLLL+ A V
Sbjct: 194 LHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVG 253
Query: 1084 FQGKNGVTPLHVASHYDHQNVALLLLEKGA 1113
+ G T L +A H+ LL + A
Sbjct: 254 TVNEAGETALDIARKKHHKECEELLEQAQA 283
Score = 32.3 bits (72), Expect = 1.8, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 1139 LHLS---ASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVD 1195
LHL+ A++ + ++++G + A +G T LH A ++ +LLLK A V
Sbjct: 194 LHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVG 253
Query: 1196 TPTKKGFTPLHIA 1208
T + G T L IA
Sbjct: 254 TVNEAGETALDIA 266
>pdb|3LJN|A Chain A, Ankyrin Repeat Protein From Leishmania Major
Length = 364
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 103/262 (39%), Gaps = 40/262 (15%)
Query: 949 KVHVSLNKIQDVSSSILRLATCDVLPQCETRLNFSNLRVREQQTPLHIASRLGNVDIVML 1008
K+HV+ K Q + + RL V P + R T LH+A + G VD
Sbjct: 23 KIHVAARKGQ--TDEVRRLIETGVSPTIQNRFGC---------TALHLACKFGCVDTAKY 71
Query: 1009 L--------LQHGA-----AVDSTTKDLYTALHIAAKEGQEEVAAVLLENGA----SLTS 1051
L L HG AV + DL AL AKE + ++L E + S
Sbjct: 72 LASVGEVHSLWHGQKPIHLAVXANKTDLVVALVEGAKERGQXPESLLNECDEREVNEIGS 131
Query: 1052 TTK--KGFTPLHLTGKYG--HIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALL 1107
K KG T LH G +++ K+L+Q A + K TPL A + +N L
Sbjct: 132 HVKHCKGQTALHWCVGLGPEYLEXIKILVQLGASPTAKDKADETPLXRAXEF--RNREAL 189
Query: 1108 LLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKN 1167
L ++ L+Y K G + LH + D++ +E G DV+
Sbjct: 190 DLXXDTVPSKSSLRLDYANK------QGNSHLHWAILINWEDVAXRFVEXGIDVNXEDNE 243
Query: 1168 GLTPLHLCAQEDRVGVAELLLK 1189
PL+L + V + + LL+
Sbjct: 244 HTVPLYLSVRAAXVLLTKELLQ 265
Score = 38.9 bits (89), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 7/96 (7%)
Query: 1294 LHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCT 1353
+H +A++G + V L++ G SP N+ G T LH+AC +G + A+ L S +
Sbjct: 24 IHVAARKGQTDEVRRLIETGVSPTIQNRF-GCTALHLACKFGCVDTAKYL--ASVGEVHS 80
Query: 1354 TDQGFTPLHHSAQQGHSTIVALLL----DRGASPNA 1385
G P+H + + +V L+ +RG P +
Sbjct: 81 LWHGQKPIHLAVXANKTDLVVALVEGAKERGQXPES 116
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 104/266 (39%), Gaps = 28/266 (10%)
Query: 818 LHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATT 877
+H+A +K + V L++ G S LH+ACK + + L G + +
Sbjct: 24 IHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVG-EVHSLW 82
Query: 878 EVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGA 937
++P +H+A N+ +V L++ GA + + E +L+ C + + +
Sbjct: 83 HGQKP-IHLAVXANKTDLVVALVE-GA--KERGQXPESLLN-ECDEREVNEI-------- 129
Query: 938 SSHVVSCYSNVKVHVSLNKIQDVSSSILRLATCDVLPQCETRLNFSNLRVREQQTPLHIA 997
SHV C +H + + I L P + + + +TPL A
Sbjct: 130 GSHVKHCKGQTALHWCVGLGPEYLEXIKILVQLGASPTAKDKAD---------ETPLXRA 180
Query: 998 SRLGNVDIVMLLL-----QHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTST 1052
N + + L + +D K + LH A E+VA +E G +
Sbjct: 181 XEFRNREALDLXXDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAXRFVEXGIDVNXE 240
Query: 1053 TKKGFTPLHLTGKYGHIKVAKLLLQK 1078
+ PL+L+ + + + K LLQK
Sbjct: 241 DNEHTVPLYLSVRAAXVLLTKELLQK 266
Score = 30.8 bits (68), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 31 QHNITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSG 77
N +HVAA+ G+ + V L+ G + + R G TALH A + G
Sbjct: 18 DENXEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFG 64
Score = 30.8 bits (68), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 989 EQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGAS 1048
E +H+A+R G D V L++ G + + TALH+A K G + A L G
Sbjct: 19 ENXEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGE- 77
Query: 1049 LTSTTKKGFTPLHL 1062
+ G P+HL
Sbjct: 78 -VHSLWHGQKPIHL 90
Score = 30.0 bits (66), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Query: 191 LHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATT 250
+HVAA G + L++ P + G T LH+ACK + + L G + +
Sbjct: 24 IHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVG-EVHSLW 82
Query: 251 EVREPMLHIACKKNRIKVVELLLK 274
++P +H+A N+ +V L++
Sbjct: 83 HGQKP-IHLAVXANKTDLVVALVE 105
>pdb|3LVQ|E Chain E, The Crystal Structure Of Asap3 In Complex With Arf6 In Trans
State
pdb|3LVR|E Chain E, The Crystal Structure Of Asap3 In Complex With Arf6 In Trans
State Soaked With Calcium
Length = 497
Score = 40.0 bits (92), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 9/109 (8%)
Query: 994 LHIASRLGN---VDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLT 1050
LH+A ++ N + +V ++Q+G +D+ D TALH AA Q + +LL+ A +
Sbjct: 175 LHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVG 234
Query: 1051 STTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHY 1099
+ + G T L + K H + +LL Q Q PLHV +
Sbjct: 235 TVNEAGETALDIARKKHHKECEELLEQA------QAGTFAFPLHVDYSW 277
Score = 36.2 bits (82), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 63/143 (44%), Gaps = 14/143 (9%)
Query: 822 CKKNRIKVVELLLKH--------GASIEATTEVREPMLHIACK---KNRIKVVELLLKHG 870
C ++ + V+E G +A E+ +LH+A K + + +V+ ++++G
Sbjct: 141 CNRDLLSVLEAFANGQDFGQPLPGPDAQAPEEL---VLHLAVKVANQASLPLVDFIIQNG 197
Query: 871 ASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVE 930
++A LH A N+ ++LLLK A + E E L IA KK+ + E
Sbjct: 198 GHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEE 257
Query: 931 LLLKHGASSHVVSCYSNVKVHVS 953
LL + A + + + +S
Sbjct: 258 LLEQAQAGTFAFPLHVDYSWVIS 280
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 14/122 (11%)
Query: 228 CKKNRIKVVELLLKH--------GASIEATTEVREPMLHIACK---KNRIKVVELLLKHG 276
C ++ + V+E G +A E+ +LH+A K + + +V+ ++++G
Sbjct: 141 CNRDLLSVLEAFANGQDFGQPLPGPDAQAPEEL---VLHLAVKVANQASLPLVDFIIQNG 197
Query: 277 ASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVE 336
++A LH A N+ ++LLLK A + E E L IA KK+ + E
Sbjct: 198 GHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEE 257
Query: 337 LL 338
LL
Sbjct: 258 LL 259
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 14/122 (11%)
Query: 261 CKKNRIKVVELLLKH--------GASIEATTEVREPMLHIACK---KNRIKVVELLLKHG 309
C ++ + V+E G +A E+ +LH+A K + + +V+ ++++G
Sbjct: 141 CNRDLLSVLEAFANGQDFGQPLPGPDAQAPEEL---VLHLAVKVANQASLPLVDFIIQNG 197
Query: 310 ASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVE 369
++A LH A N+ ++LLLK A + E E L IA KK+ + E
Sbjct: 198 GHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEE 257
Query: 370 LL 371
LL
Sbjct: 258 LL 259
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 14/122 (11%)
Query: 294 CKKNRIKVVELLLKH--------GASIEATTEVREPMLHIACK---KNRIKVVELLLKHG 342
C ++ + V+E G +A E+ +LH+A K + + +V+ ++++G
Sbjct: 141 CNRDLLSVLEAFANGQDFGQPLPGPDAQAPEEL---VLHLAVKVANQASLPLVDFIIQNG 197
Query: 343 ASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVE 402
++A LH A N+ ++LLLK A + E E L IA KK+ + E
Sbjct: 198 GHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEE 257
Query: 403 LL 404
LL
Sbjct: 258 LL 259
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 14/122 (11%)
Query: 327 CKKNRIKVVELLLKH--------GASIEATTEVREPMLHIACK---KNRIKVVELLLKHG 375
C ++ + V+E G +A E+ +LH+A K + + +V+ ++++G
Sbjct: 141 CNRDLLSVLEAFANGQDFGQPLPGPDAQAPEEL---VLHLAVKVANQASLPLVDFIIQNG 197
Query: 376 ASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVE 435
++A LH A N+ ++LLLK A + E E L IA KK+ + E
Sbjct: 198 GHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEE 257
Query: 436 LL 437
LL
Sbjct: 258 LL 259
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 14/122 (11%)
Query: 360 CKKNRIKVVELLLKH--------GASIEATTEVREPMLHIACK---KNRIKVVELLLKHG 408
C ++ + V+E G +A E+ +LH+A K + + +V+ ++++G
Sbjct: 141 CNRDLLSVLEAFANGQDFGQPLPGPDAQAPEEL---VLHLAVKVANQASLPLVDFIIQNG 197
Query: 409 ASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVE 468
++A LH A N+ ++LLLK A + E E L IA KK+ + E
Sbjct: 198 GHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEE 257
Query: 469 LL 470
LL
Sbjct: 258 LL 259
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 14/122 (11%)
Query: 393 CKKNRIKVVELLLKH--------GASIEATTEVREPMLHIACK---KNRIKVVELLLKHG 441
C ++ + V+E G +A E+ +LH+A K + + +V+ ++++G
Sbjct: 141 CNRDLLSVLEAFANGQDFGQPLPGPDAQAPEEL---VLHLAVKVANQASLPLVDFIIQNG 197
Query: 442 ASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVE 501
++A LH A N+ ++LLLK A + E E L IA KK+ + E
Sbjct: 198 GHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEE 257
Query: 502 LL 503
LL
Sbjct: 258 LL 259
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 14/122 (11%)
Query: 426 CKKNRIKVVELLLKH--------GASIEATTEVREPMLHIACK---KNRIKVVELLLKHG 474
C ++ + V+E G +A E+ +LH+A K + + +V+ ++++G
Sbjct: 141 CNRDLLSVLEAFANGQDFGQPLPGPDAQAPEEL---VLHLAVKVANQASLPLVDFIIQNG 197
Query: 475 ASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVE 534
++A LH A N+ ++LLLK A + E E L IA KK+ + E
Sbjct: 198 GHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEE 257
Query: 535 LL 536
LL
Sbjct: 258 LL 259
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 14/122 (11%)
Query: 459 CKKNRIKVVELLLKH--------GASIEATTEVREPMLHIACK---KNRIKVVELLLKHG 507
C ++ + V+E G +A E+ +LH+A K + + +V+ ++++G
Sbjct: 141 CNRDLLSVLEAFANGQDFGQPLPGPDAQAPEEL---VLHLAVKVANQASLPLVDFIIQNG 197
Query: 508 ASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVE 567
++A LH A N+ ++LLLK A + E E L IA KK+ + E
Sbjct: 198 GHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEE 257
Query: 568 LL 569
LL
Sbjct: 258 LL 259
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 14/122 (11%)
Query: 492 CKKNRIKVVELLLKH--------GASIEATTEVREPMLHIACK---KNRIKVVELLLKHG 540
C ++ + V+E G +A E+ +LH+A K + + +V+ ++++G
Sbjct: 141 CNRDLLSVLEAFANGQDFGQPLPGPDAQAPEEL---VLHLAVKVANQASLPLVDFIIQNG 197
Query: 541 ASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVE 600
++A LH A N+ ++LLLK A + E E L IA KK+ + E
Sbjct: 198 GHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEE 257
Query: 601 LL 602
LL
Sbjct: 258 LL 259
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 14/122 (11%)
Query: 525 CKKNRIKVVELLLKH--------GASIEATTEVREPMLHIACK---KNRIKVVELLLKHG 573
C ++ + V+E G +A E+ +LH+A K + + +V+ ++++G
Sbjct: 141 CNRDLLSVLEAFANGQDFGQPLPGPDAQAPEEL---VLHLAVKVANQASLPLVDFIIQNG 197
Query: 574 ASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVE 633
++A LH A N+ ++LLLK A + E E L IA KK+ + E
Sbjct: 198 GHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEE 257
Query: 634 LL 635
LL
Sbjct: 258 LL 259
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 14/122 (11%)
Query: 558 CKKNRIKVVELLLKH--------GASIEATTEVREPMLHIACK---KNRIKVVELLLKHG 606
C ++ + V+E G +A E+ +LH+A K + + +V+ ++++G
Sbjct: 141 CNRDLLSVLEAFANGQDFGQPLPGPDAQAPEEL---VLHLAVKVANQASLPLVDFIIQNG 197
Query: 607 ASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVE 666
++A LH A N+ ++LLLK A + E E L IA KK+ + E
Sbjct: 198 GHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEE 257
Query: 667 LL 668
LL
Sbjct: 258 LL 259
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 14/122 (11%)
Query: 591 CKKNRIKVVELLLKH--------GASIEATTEVREPMLHIACK---KNRIKVVELLLKHG 639
C ++ + V+E G +A E+ +LH+A K + + +V+ ++++G
Sbjct: 141 CNRDLLSVLEAFANGQDFGQPLPGPDAQAPEEL---VLHLAVKVANQASLPLVDFIIQNG 197
Query: 640 ASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVE 699
++A LH A N+ ++LLLK A + E E L IA KK+ + E
Sbjct: 198 GHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEE 257
Query: 700 LL 701
LL
Sbjct: 258 LL 259
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 14/122 (11%)
Query: 624 CKKNRIKVVELLLKH--------GASIEATTEVREPMLHIACK---KNRIKVVELLLKHG 672
C ++ + V+E G +A E+ +LH+A K + + +V+ ++++G
Sbjct: 141 CNRDLLSVLEAFANGQDFGQPLPGPDAQAPEEL---VLHLAVKVANQASLPLVDFIIQNG 197
Query: 673 ASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVE 732
++A LH A N+ ++LLLK A + E E L IA KK+ + E
Sbjct: 198 GHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEE 257
Query: 733 LL 734
LL
Sbjct: 258 LL 259
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 14/122 (11%)
Query: 657 CKKNRIKVVELLLKH--------GASIEATTEVREPMLHIACK---KNRIKVVELLLKHG 705
C ++ + V+E G +A E+ +LH+A K + + +V+ ++++G
Sbjct: 141 CNRDLLSVLEAFANGQDFGQPLPGPDAQAPEEL---VLHLAVKVANQASLPLVDFIIQNG 197
Query: 706 ASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVE 765
++A LH A N+ ++LLLK A + E E L IA KK+ + E
Sbjct: 198 GHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEE 257
Query: 766 LL 767
LL
Sbjct: 258 LL 259
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 14/122 (11%)
Query: 690 CKKNRIKVVELLLKH--------GASIEATTEVREPMLHIACK---KNRIKVVELLLKHG 738
C ++ + V+E G +A E+ +LH+A K + + +V+ ++++G
Sbjct: 141 CNRDLLSVLEAFANGQDFGQPLPGPDAQAPEEL---VLHLAVKVANQASLPLVDFIIQNG 197
Query: 739 ASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVE 798
++A LH A N+ ++LLLK A + E E L IA KK+ + E
Sbjct: 198 GHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEE 257
Query: 799 LL 800
LL
Sbjct: 258 LL 259
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 14/122 (11%)
Query: 723 CKKNRIKVVELLLKH--------GASIEATTEVREPMLHIACK---KNRIKVVELLLKHG 771
C ++ + V+E G +A E+ +LH+A K + + +V+ ++++G
Sbjct: 141 CNRDLLSVLEAFANGQDFGQPLPGPDAQAPEEL---VLHLAVKVANQASLPLVDFIIQNG 197
Query: 772 ASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVE 831
++A LH A N+ ++LLLK A + E E L IA KK+ + E
Sbjct: 198 GHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEE 257
Query: 832 LL 833
LL
Sbjct: 258 LL 259
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 14/122 (11%)
Query: 756 CKKNRIKVVELLLKH--------GASIEATTEVREPMLHIACK---KNRIKVVELLLKHG 804
C ++ + V+E G +A E+ +LH+A K + + +V+ ++++G
Sbjct: 141 CNRDLLSVLEAFANGQDFGQPLPGPDAQAPEEL---VLHLAVKVANQASLPLVDFIIQNG 197
Query: 805 ASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVE 864
++A LH A N+ ++LLLK A + E E L IA KK+ + E
Sbjct: 198 GHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEE 257
Query: 865 LL 866
LL
Sbjct: 258 LL 259
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 14/122 (11%)
Query: 789 CKKNRIKVVELLLKH--------GASIEATTEVREPMLHIACK---KNRIKVVELLLKHG 837
C ++ + V+E G +A E+ +LH+A K + + +V+ ++++G
Sbjct: 141 CNRDLLSVLEAFANGQDFGQPLPGPDAQAPEEL---VLHLAVKVANQASLPLVDFIIQNG 197
Query: 838 ASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVE 897
++A LH A N+ ++LLLK A + E E L IA KK+ + E
Sbjct: 198 GHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEE 257
Query: 898 LL 899
LL
Sbjct: 258 LL 259
Score = 35.4 bits (80), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
Query: 213 PNARALNGFTPLHIACK---KNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 269
P+A+A LH+A K + + +V+ ++++G ++A LH A N+ +
Sbjct: 165 PDAQAPEELV-LHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCL 223
Query: 270 ELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 305
+LLLK A + E E L IA KK+ + ELL
Sbjct: 224 KLLLKGRALVGTVNEAGETALDIARKKHHKECEELL 259
Score = 33.1 bits (74), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Query: 48 MVTLLLSRGANIDNKTRDGLTALHCAARSGHEAVIEMLLEQGAPISSKTKV--RGFYILR 105
+V ++ G ++D K DG TALH AA +++LL+ A + + + I R
Sbjct: 189 LVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIAR 248
Query: 106 SGHEAVIEMLLEQ 118
H E LLEQ
Sbjct: 249 KKHHKECEELLEQ 261
Score = 30.8 bits (68), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 1139 LHLS---ASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVD 1195
LHL+ A++ + ++++G + A +G T LH A ++ +LLLK A V
Sbjct: 175 LHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVG 234
Query: 1196 TPTKKGFTPLHIA 1208
T + G T L IA
Sbjct: 235 TVNEAGETALDIA 247
Score = 30.4 bits (67), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 36/85 (42%), Gaps = 3/85 (3%)
Query: 1027 LHIAAKEGQE---EVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVD 1083
LH+A K + + +++NG L + G T LH Y KLLL+ A V
Sbjct: 175 LHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVG 234
Query: 1084 FQGKNGVTPLHVASHYDHQNVALLL 1108
+ G T L +A H+ LL
Sbjct: 235 TVNEAGETALDIARKKHHKECEELL 259
>pdb|2F37|A Chain A, Crystal Structure Of The Ankyrin Repeat Domain Of Human
Trpv2
pdb|2F37|B Chain B, Crystal Structure Of The Ankyrin Repeat Domain Of Human
Trpv2
Length = 251
Score = 39.7 bits (91), Expect = 0.011, Method: Composition-based stats.
Identities = 44/151 (29%), Positives = 70/151 (46%), Gaps = 25/151 (16%)
Query: 884 LHIACKKNRIKVVELLLKHGASIEATTEVR--------------EPMLHIACKKNRIKVV 929
LHIA +K ++ V+LL+++GA++ A R P+ AC K + VV
Sbjct: 99 LHIAIEKRSLQCVKLLVENGANVHARACGRFFQKGQGTCFYFGELPLSLAACTK-QWDVV 157
Query: 930 ELLLKHG---ASSHVVSCYSNVKVHVSLNKIQDVSSSILRLATC--DVLPQCETRL---- 980
LL++ AS N +H +L I D S+ + L T D L Q RL
Sbjct: 158 SYLLENPHQPASLQATDSQGNTVLH-ALVXISDNSAENIALVTSXYDGLLQAGARLCPTV 216
Query: 981 NFSNLRVREQQTPLHIASRLGNVDIVMLLLQ 1011
++R + TPL +A++ G ++I +LQ
Sbjct: 217 QLEDIRNLQDLTPLKLAAKEGKIEIFRHILQ 247
Score = 38.5 bits (88), Expect = 0.028, Method: Composition-based stats.
Identities = 48/182 (26%), Positives = 74/182 (40%), Gaps = 50/182 (27%)
Query: 917 LHIACKKNRIKVVELLLKHGASSHVVSCYSNVKVHVSLNKIQDVSSSILRLATCDVLPQC 976
LHIA +K ++ V+LL+++GA+ H +C K Q TC
Sbjct: 99 LHIAIEKRSLQCVKLLVENGANVHARACGR------FFQKGQ---------GTC------ 137
Query: 977 ETRLNFSNLRVREQQTPLHIASRLGNVDIVMLLLQHG------AAVDSTTKDLYTALHIA 1030
F L PL +A+ D+V LL++ A DS + AL
Sbjct: 138 ---FYFGEL-------PLSLAACTKQWDVVSYLLENPHQPASLQATDSQGNTVLHALVXI 187
Query: 1031 AKEGQEEVAAV------LLENGASLTSTTK-------KGFTPLHLTGKYGHIKVAKLLLQ 1077
+ E +A V LL+ GA L T + + TPL L K G I++ + +LQ
Sbjct: 188 SDNSAENIALVTSXYDGLLQAGARLCPTVQLEDIRNLQDLTPLKLAAKEGKIEIFRHILQ 247
Query: 1078 KD 1079
++
Sbjct: 248 RE 249
Score = 32.3 bits (72), Expect = 2.1, Method: Composition-based stats.
Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 34/154 (22%)
Query: 220 GFTPLHIACKKNRIKVVELLLKHGASIEATTEVR--------------EPMLHIACKKNR 265
G + LHIA +K ++ V+LL+++GA++ A R P+ AC K +
Sbjct: 95 GHSALHIAIEKRSLQCVKLLVENGANVHARACGRFFQKGQGTCFYFGELPLSLAACTK-Q 153
Query: 266 IKVVELLLKH---GASIEATTEVREPMLH--IACKKNRIKVVEL-------LLKHGASIE 313
VV LL++ AS++AT +LH + N + + L LL+ GA +
Sbjct: 154 WDVVSYLLENPHQPASLQATDSQGNTVLHALVXISDNSAENIALVTSXYDGLLQAGARLC 213
Query: 314 ATTEVRE-------PMLHIACKKNRIKVVELLLK 340
T ++ + L +A K+ +I++ +L+
Sbjct: 214 PTVQLEDIRNLQDLTPLKLAAKEGKIEIFRHILQ 247
Score = 31.6 bits (70), Expect = 3.5, Method: Composition-based stats.
Identities = 48/182 (26%), Positives = 72/182 (39%), Gaps = 46/182 (25%)
Query: 991 QTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLY-------------TALHIAAKEGQEE 1037
+ LHIA ++ V LL+++GA V + + L +AA Q +
Sbjct: 96 HSALHIAIEKRSLQCVKLLVENGANVHARACGRFFQKGQGTCFYFGELPLSLAACTKQWD 155
Query: 1038 VAAVLLEN---GASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLH 1094
V + LLEN ASL +T +G T LH A V +
Sbjct: 156 VVSYLLENPHQPASLQATDSQGNTVLH------------------ALVXISDNSAENIAL 197
Query: 1095 VASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAML 1154
V S YD LL+ GA + T LE + ++ TPL L+A EG ++ +
Sbjct: 198 VTSXYDG------LLQAGARL-CPTVQLE-----DIRNLQDLTPLKLAAKEGKIEIFRHI 245
Query: 1155 LE 1156
L+
Sbjct: 246 LQ 247
Score = 30.0 bits (66), Expect = 8.5, Method: Composition-based stats.
Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 34/150 (22%)
Query: 323 LHIACKKNRIKVVELLLKHGASIEATTEVR--------------EPMLHIACKKNRIKVV 368
LHIA +K ++ V+LL+++GA++ A R P+ AC K + VV
Sbjct: 99 LHIAIEKRSLQCVKLLVENGANVHARACGRFFQKGQGTCFYFGELPLSLAACTK-QWDVV 157
Query: 369 ELLLKH---GASIEATTEVREPMLH--IACKKNRIKVVEL-------LLKHGASIEATTE 416
LL++ AS++AT +LH + N + + L LL+ GA + T +
Sbjct: 158 SYLLENPHQPASLQATDSQGNTVLHALVXISDNSAENIALVTSXYDGLLQAGARLCPTVQ 217
Query: 417 VRE-------PMLHIACKKNRIKVVELLLK 439
+ + L +A K+ +I++ +L+
Sbjct: 218 LEDIRNLQDLTPLKLAAKEGKIEIFRHILQ 247
Score = 30.0 bits (66), Expect = 8.5, Method: Composition-based stats.
Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 34/150 (22%)
Query: 422 LHIACKKNRIKVVELLLKHGASIEATTEVR--------------EPMLHIACKKNRIKVV 467
LHIA +K ++ V+LL+++GA++ A R P+ AC K + VV
Sbjct: 99 LHIAIEKRSLQCVKLLVENGANVHARACGRFFQKGQGTCFYFGELPLSLAACTK-QWDVV 157
Query: 468 ELLLKH---GASIEATTEVREPMLH--IACKKNRIKVVEL-------LLKHGASIEATTE 515
LL++ AS++AT +LH + N + + L LL+ GA + T +
Sbjct: 158 SYLLENPHQPASLQATDSQGNTVLHALVXISDNSAENIALVTSXYDGLLQAGARLCPTVQ 217
Query: 516 VRE-------PMLHIACKKNRIKVVELLLK 538
+ + L +A K+ +I++ +L+
Sbjct: 218 LEDIRNLQDLTPLKLAAKEGKIEIFRHILQ 247
Score = 30.0 bits (66), Expect = 8.5, Method: Composition-based stats.
Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 34/150 (22%)
Query: 521 LHIACKKNRIKVVELLLKHGASIEATTEVR--------------EPMLHIACKKNRIKVV 566
LHIA +K ++ V+LL+++GA++ A R P+ AC K + VV
Sbjct: 99 LHIAIEKRSLQCVKLLVENGANVHARACGRFFQKGQGTCFYFGELPLSLAACTK-QWDVV 157
Query: 567 ELLLKH---GASIEATTEVREPMLH--IACKKNRIKVVEL-------LLKHGASIEATTE 614
LL++ AS++AT +LH + N + + L LL+ GA + T +
Sbjct: 158 SYLLENPHQPASLQATDSQGNTVLHALVXISDNSAENIALVTSXYDGLLQAGARLCPTVQ 217
Query: 615 VRE-------PMLHIACKKNRIKVVELLLK 637
+ + L +A K+ +I++ +L+
Sbjct: 218 LEDIRNLQDLTPLKLAAKEGKIEIFRHILQ 247
Score = 30.0 bits (66), Expect = 8.5, Method: Composition-based stats.
Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 34/150 (22%)
Query: 620 LHIACKKNRIKVVELLLKHGASIEATTEVR--------------EPMLHIACKKNRIKVV 665
LHIA +K ++ V+LL+++GA++ A R P+ AC K + VV
Sbjct: 99 LHIAIEKRSLQCVKLLVENGANVHARACGRFFQKGQGTCFYFGELPLSLAACTK-QWDVV 157
Query: 666 ELLLKH---GASIEATTEVREPMLH--IACKKNRIKVVEL-------LLKHGASIEATTE 713
LL++ AS++AT +LH + N + + L LL+ GA + T +
Sbjct: 158 SYLLENPHQPASLQATDSQGNTVLHALVXISDNSAENIALVTSXYDGLLQAGARLCPTVQ 217
Query: 714 VRE-------PMLHIACKKNRIKVVELLLK 736
+ + L +A K+ +I++ +L+
Sbjct: 218 LEDIRNLQDLTPLKLAAKEGKIEIFRHILQ 247
Score = 30.0 bits (66), Expect = 8.5, Method: Composition-based stats.
Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 34/150 (22%)
Query: 719 LHIACKKNRIKVVELLLKHGASIEATTEVR--------------EPMLHIACKKNRIKVV 764
LHIA +K ++ V+LL+++GA++ A R P+ AC K + VV
Sbjct: 99 LHIAIEKRSLQCVKLLVENGANVHARACGRFFQKGQGTCFYFGELPLSLAACTK-QWDVV 157
Query: 765 ELLLKH---GASIEATTEVREPMLH--IACKKNRIKVVEL-------LLKHGASIEATTE 812
LL++ AS++AT +LH + N + + L LL+ GA + T +
Sbjct: 158 SYLLENPHQPASLQATDSQGNTVLHALVXISDNSAENIALVTSXYDGLLQAGARLCPTVQ 217
Query: 813 VRE-------PMLHIACKKNRIKVVELLLK 835
+ + L +A K+ +I++ +L+
Sbjct: 218 LEDIRNLQDLTPLKLAAKEGKIEIFRHILQ 247
Score = 30.0 bits (66), Expect = 8.5, Method: Composition-based stats.
Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 34/150 (22%)
Query: 818 LHIACKKNRIKVVELLLKHGASIEATTEVR--------------EPMLHIACKKNRIKVV 863
LHIA +K ++ V+LL+++GA++ A R P+ AC K + VV
Sbjct: 99 LHIAIEKRSLQCVKLLVENGANVHARACGRFFQKGQGTCFYFGELPLSLAACTK-QWDVV 157
Query: 864 ELLLKH---GASIEATTEVREPMLH--IACKKNRIKVVEL-------LLKHGASIEATTE 911
LL++ AS++AT +LH + N + + L LL+ GA + T +
Sbjct: 158 SYLLENPHQPASLQATDSQGNTVLHALVXISDNSAENIALVTSXYDGLLQAGARLCPTVQ 217
Query: 912 VRE-------PMLHIACKKNRIKVVELLLK 934
+ + L +A K+ +I++ +L+
Sbjct: 218 LEDIRNLQDLTPLKLAAKEGKIEIFRHILQ 247
>pdb|3T9K|A Chain A, Crystal Structure Of Acap1 C-portion Mutant S554d Fused With
Integrin Beta1 Peptide
pdb|3T9K|B Chain B, Crystal Structure Of Acap1 C-portion Mutant S554d Fused With
Integrin Beta1 Peptide
Length = 390
Score = 39.7 bits (91), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
Query: 1251 YTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPN-ATNKGFTPLHHSAQQGHSTIVALL 1309
+ N TPL + LL GA+ N A + G PLHH+ GH+ + L
Sbjct: 228 WVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLF 287
Query: 1310 LDRGASPNATNKTRGFTPLHIACHYGQISMARLL 1343
L RGA A + + G PL IA + LL
Sbjct: 288 LKRGADLGARD-SEGRDPLTIAMETANADIVTLL 320
Score = 38.9 bits (89), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 1152 AMLLEHGADVS--HAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIAC 1209
A L HGADV+ + ++ TPL + + E LL+N A V+ G PLH A
Sbjct: 217 ADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHAT 276
Query: 1210 HYGQISMARLLLDQSANV 1227
G +A L L + A++
Sbjct: 277 ILGHTGLACLFLKRGADL 294
Score = 38.9 bits (89), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 2/101 (1%)
Query: 1010 LQHGAAVD--STTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYG 1067
L HGA V+ + +D T L A LL+NGA++ G PLH G
Sbjct: 220 LAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILG 279
Query: 1068 HIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLL 1108
H +A L L++ A + + G PL +A + ++ LL
Sbjct: 280 HTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLL 320
Score = 37.7 bits (86), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 44/112 (39%), Gaps = 8/112 (7%)
Query: 1284 PNATNKGFTPLHHSA----QQGHSTIVALLLD---RGASPNATNKTR-GFTPLHIACHYG 1335
P ++ LH A GH + + D GA N N + TPL A
Sbjct: 187 PEPPSEDLGSLHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAAN 246
Query: 1336 QISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATN 1387
+ LL ANV+ G PLHH+ GH+ + L L RGA A +
Sbjct: 247 SLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARD 298
Score = 35.4 bits (80), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 66/144 (45%), Gaps = 12/144 (8%)
Query: 171 PVDFQGKA--PVDDVTVDYLTALHVAAHCGHARVAKTLLDKKA-DPNARALNGF----TP 223
P D + K P +D+ + AL A GH T+ D A + +NG TP
Sbjct: 180 PGDLRSKPEPPSEDLGSLHPGALLFRAS-GHPPSLPTMADALAHGADVNWVNGGQDNATP 238
Query: 224 LHIACKKNRIKVVELLLKHGASI-EATTEVREPMLHIACKKNRIKVVELLLKHGASIEA- 281
L A N + E LL++GA++ +A + R P LH A + L LK GA + A
Sbjct: 239 LIQATAANSLLACEFLLQNGANVNQADSAGRGP-LHHATILGHTGLACLFLKRGADLGAR 297
Query: 282 TTEVREPMLHIACKKNRIKVVELL 305
+E R+P L IA + +V LL
Sbjct: 298 DSEGRDP-LTIAMETANADIVTLL 320
Score = 35.4 bits (80), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 31/67 (46%)
Query: 1121 LLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDR 1180
LL+ GA N AG PLH + GH ++ + L+ GAD+ G PL + +
Sbjct: 254 LLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETAN 313
Query: 1181 VGVAELL 1187
+ LL
Sbjct: 314 ADIVTLL 320
Score = 35.0 bits (79), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 31/68 (45%)
Query: 1153 MLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYG 1212
LL++GA+V+ A G PLH G+A L LK A + +G PL IA
Sbjct: 253 FLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETA 312
Query: 1213 QISMARLL 1220
+ LL
Sbjct: 313 NADIVTLL 320
Score = 33.5 bits (75), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 240 LKHGASIEATTEVRE---PMLHIACKKNRIKVVELLLKHGASI-EATTEVREPMLHIACK 295
L HGA + ++ P++ A N + E LL++GA++ +A + R P LH A
Sbjct: 220 LAHGADVNWVNGGQDNATPLIQ-ATAANSLLACEFLLQNGANVNQADSAGRGP-LHHATI 277
Query: 296 KNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKVVELL 338
+ L LK GA + A +E R+P L IA + +V LL
Sbjct: 278 LGHTGLACLFLKRGADLGARDSEGRDP-LTIAMETANADIVTLL 320
Score = 33.5 bits (75), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 273 LKHGASIEATTEVRE---PMLHIACKKNRIKVVELLLKHGASI-EATTEVREPMLHIACK 328
L HGA + ++ P++ A N + E LL++GA++ +A + R P LH A
Sbjct: 220 LAHGADVNWVNGGQDNATPLIQ-ATAANSLLACEFLLQNGANVNQADSAGRGP-LHHATI 277
Query: 329 KNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKVVELL 371
+ L LK GA + A +E R+P L IA + +V LL
Sbjct: 278 LGHTGLACLFLKRGADLGARDSEGRDP-LTIAMETANADIVTLL 320
Score = 33.5 bits (75), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 306 LKHGASIEATTEVRE---PMLHIACKKNRIKVVELLLKHGASI-EATTEVREPMLHIACK 361
L HGA + ++ P++ A N + E LL++GA++ +A + R P LH A
Sbjct: 220 LAHGADVNWVNGGQDNATPLIQ-ATAANSLLACEFLLQNGANVNQADSAGRGP-LHHATI 277
Query: 362 KNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKVVELL 404
+ L LK GA + A +E R+P L IA + +V LL
Sbjct: 278 LGHTGLACLFLKRGADLGARDSEGRDP-LTIAMETANADIVTLL 320
Score = 33.5 bits (75), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 339 LKHGASIEATTEVRE---PMLHIACKKNRIKVVELLLKHGASI-EATTEVREPMLHIACK 394
L HGA + ++ P++ A N + E LL++GA++ +A + R P LH A
Sbjct: 220 LAHGADVNWVNGGQDNATPLIQ-ATAANSLLACEFLLQNGANVNQADSAGRGP-LHHATI 277
Query: 395 KNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKVVELL 437
+ L LK GA + A +E R+P L IA + +V LL
Sbjct: 278 LGHTGLACLFLKRGADLGARDSEGRDP-LTIAMETANADIVTLL 320
Score = 33.5 bits (75), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 372 LKHGASIEATTEVRE---PMLHIACKKNRIKVVELLLKHGASI-EATTEVREPMLHIACK 427
L HGA + ++ P++ A N + E LL++GA++ +A + R P LH A
Sbjct: 220 LAHGADVNWVNGGQDNATPLIQ-ATAANSLLACEFLLQNGANVNQADSAGRGP-LHHATI 277
Query: 428 KNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKVVELL 470
+ L LK GA + A +E R+P L IA + +V LL
Sbjct: 278 LGHTGLACLFLKRGADLGARDSEGRDP-LTIAMETANADIVTLL 320
Score = 33.5 bits (75), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 405 LKHGASIEATTEVRE---PMLHIACKKNRIKVVELLLKHGASI-EATTEVREPMLHIACK 460
L HGA + ++ P++ A N + E LL++GA++ +A + R P LH A
Sbjct: 220 LAHGADVNWVNGGQDNATPLIQ-ATAANSLLACEFLLQNGANVNQADSAGRGP-LHHATI 277
Query: 461 KNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKVVELL 503
+ L LK GA + A +E R+P L IA + +V LL
Sbjct: 278 LGHTGLACLFLKRGADLGARDSEGRDP-LTIAMETANADIVTLL 320
Score = 33.5 bits (75), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 438 LKHGASIEATTEVRE---PMLHIACKKNRIKVVELLLKHGASI-EATTEVREPMLHIACK 493
L HGA + ++ P++ A N + E LL++GA++ +A + R P LH A
Sbjct: 220 LAHGADVNWVNGGQDNATPLIQ-ATAANSLLACEFLLQNGANVNQADSAGRGP-LHHATI 277
Query: 494 KNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKVVELL 536
+ L LK GA + A +E R+P L IA + +V LL
Sbjct: 278 LGHTGLACLFLKRGADLGARDSEGRDP-LTIAMETANADIVTLL 320
Score = 33.5 bits (75), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 471 LKHGASIEATTEVRE---PMLHIACKKNRIKVVELLLKHGASI-EATTEVREPMLHIACK 526
L HGA + ++ P++ A N + E LL++GA++ +A + R P LH A
Sbjct: 220 LAHGADVNWVNGGQDNATPLIQ-ATAANSLLACEFLLQNGANVNQADSAGRGP-LHHATI 277
Query: 527 KNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKVVELL 569
+ L LK GA + A +E R+P L IA + +V LL
Sbjct: 278 LGHTGLACLFLKRGADLGARDSEGRDP-LTIAMETANADIVTLL 320
Score = 33.5 bits (75), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 504 LKHGASIEATTEVRE---PMLHIACKKNRIKVVELLLKHGASI-EATTEVREPMLHIACK 559
L HGA + ++ P++ A N + E LL++GA++ +A + R P LH A
Sbjct: 220 LAHGADVNWVNGGQDNATPLIQ-ATAANSLLACEFLLQNGANVNQADSAGRGP-LHHATI 277
Query: 560 KNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKVVELL 602
+ L LK GA + A +E R+P L IA + +V LL
Sbjct: 278 LGHTGLACLFLKRGADLGARDSEGRDP-LTIAMETANADIVTLL 320
Score = 33.5 bits (75), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 537 LKHGASIEATTEVRE---PMLHIACKKNRIKVVELLLKHGASI-EATTEVREPMLHIACK 592
L HGA + ++ P++ A N + E LL++GA++ +A + R P LH A
Sbjct: 220 LAHGADVNWVNGGQDNATPLIQ-ATAANSLLACEFLLQNGANVNQADSAGRGP-LHHATI 277
Query: 593 KNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKVVELL 635
+ L LK GA + A +E R+P L IA + +V LL
Sbjct: 278 LGHTGLACLFLKRGADLGARDSEGRDP-LTIAMETANADIVTLL 320
Score = 33.5 bits (75), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 570 LKHGASIEATTEVRE---PMLHIACKKNRIKVVELLLKHGASI-EATTEVREPMLHIACK 625
L HGA + ++ P++ A N + E LL++GA++ +A + R P LH A
Sbjct: 220 LAHGADVNWVNGGQDNATPLIQ-ATAANSLLACEFLLQNGANVNQADSAGRGP-LHHATI 277
Query: 626 KNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKVVELL 668
+ L LK GA + A +E R+P L IA + +V LL
Sbjct: 278 LGHTGLACLFLKRGADLGARDSEGRDP-LTIAMETANADIVTLL 320
Score = 33.5 bits (75), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 603 LKHGASIEATTEVRE---PMLHIACKKNRIKVVELLLKHGASI-EATTEVREPMLHIACK 658
L HGA + ++ P++ A N + E LL++GA++ +A + R P LH A
Sbjct: 220 LAHGADVNWVNGGQDNATPLIQ-ATAANSLLACEFLLQNGANVNQADSAGRGP-LHHATI 277
Query: 659 KNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKVVELL 701
+ L LK GA + A +E R+P L IA + +V LL
Sbjct: 278 LGHTGLACLFLKRGADLGARDSEGRDP-LTIAMETANADIVTLL 320
Score = 33.5 bits (75), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 636 LKHGASIEATTEVRE---PMLHIACKKNRIKVVELLLKHGASI-EATTEVREPMLHIACK 691
L HGA + ++ P++ A N + E LL++GA++ +A + R P LH A
Sbjct: 220 LAHGADVNWVNGGQDNATPLIQ-ATAANSLLACEFLLQNGANVNQADSAGRGP-LHHATI 277
Query: 692 KNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKVVELL 734
+ L LK GA + A +E R+P L IA + +V LL
Sbjct: 278 LGHTGLACLFLKRGADLGARDSEGRDP-LTIAMETANADIVTLL 320
Score = 33.5 bits (75), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 669 LKHGASIEATTEVRE---PMLHIACKKNRIKVVELLLKHGASI-EATTEVREPMLHIACK 724
L HGA + ++ P++ A N + E LL++GA++ +A + R P LH A
Sbjct: 220 LAHGADVNWVNGGQDNATPLIQ-ATAANSLLACEFLLQNGANVNQADSAGRGP-LHHATI 277
Query: 725 KNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKVVELL 767
+ L LK GA + A +E R+P L IA + +V LL
Sbjct: 278 LGHTGLACLFLKRGADLGARDSEGRDP-LTIAMETANADIVTLL 320
Score = 33.5 bits (75), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 702 LKHGASIEATTEVRE---PMLHIACKKNRIKVVELLLKHGASI-EATTEVREPMLHIACK 757
L HGA + ++ P++ A N + E LL++GA++ +A + R P LH A
Sbjct: 220 LAHGADVNWVNGGQDNATPLIQ-ATAANSLLACEFLLQNGANVNQADSAGRGP-LHHATI 277
Query: 758 KNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKVVELL 800
+ L LK GA + A +E R+P L IA + +V LL
Sbjct: 278 LGHTGLACLFLKRGADLGARDSEGRDP-LTIAMETANADIVTLL 320
Score = 33.5 bits (75), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 735 LKHGASIEATTEVRE---PMLHIACKKNRIKVVELLLKHGASI-EATTEVREPMLHIACK 790
L HGA + ++ P++ A N + E LL++GA++ +A + R P LH A
Sbjct: 220 LAHGADVNWVNGGQDNATPLIQ-ATAANSLLACEFLLQNGANVNQADSAGRGP-LHHATI 277
Query: 791 KNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKVVELL 833
+ L LK GA + A +E R+P L IA + +V LL
Sbjct: 278 LGHTGLACLFLKRGADLGARDSEGRDP-LTIAMETANADIVTLL 320
Score = 33.5 bits (75), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 768 LKHGASIEATTEVRE---PMLHIACKKNRIKVVELLLKHGASI-EATTEVREPMLHIACK 823
L HGA + ++ P++ A N + E LL++GA++ +A + R P LH A
Sbjct: 220 LAHGADVNWVNGGQDNATPLIQ-ATAANSLLACEFLLQNGANVNQADSAGRGP-LHHATI 277
Query: 824 KNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKVVELL 866
+ L LK GA + A +E R+P L IA + +V LL
Sbjct: 278 LGHTGLACLFLKRGADLGARDSEGRDP-LTIAMETANADIVTLL 320
Score = 33.5 bits (75), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 801 LKHGASIEATTEVRE---PMLHIACKKNRIKVVELLLKHGASI-EATTEVREPMLHIACK 856
L HGA + ++ P++ A N + E LL++GA++ +A + R P LH A
Sbjct: 220 LAHGADVNWVNGGQDNATPLIQ-ATAANSLLACEFLLQNGANVNQADSAGRGP-LHHATI 277
Query: 857 KNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKVVELL 899
+ L LK GA + A +E R+P L IA + +V LL
Sbjct: 278 LGHTGLACLFLKRGADLGARDSEGRDP-LTIAMETANADIVTLL 320
Score = 33.5 bits (75), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 834 LKHGASIEATTEVRE---PMLHIACKKNRIKVVELLLKHGASI-EATTEVREPMLHIACK 889
L HGA + ++ P++ A N + E LL++GA++ +A + R P LH A
Sbjct: 220 LAHGADVNWVNGGQDNATPLIQ-ATAANSLLACEFLLQNGANVNQADSAGRGP-LHHATI 277
Query: 890 KNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKVVELL 932
+ L LK GA + A +E R+P L IA + +V LL
Sbjct: 278 LGHTGLACLFLKRGADLGARDSEGRDP-LTIAMETANADIVTLL 320
Score = 33.1 bits (74), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 131 VLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPV---DFQGKAP----VDDV 183
LL+NGA++ G PLH GH +A L L++ A + D +G+ P ++
Sbjct: 253 FLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETA 312
Query: 184 TVDYLTALHVA 194
D +T L +A
Sbjct: 313 NADIVTLLRLA 323
Score = 32.3 bits (72), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 40/88 (45%)
Query: 988 REQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGA 1047
++ TPL A+ ++ LLQ+GA V+ LH A G +A + L+ GA
Sbjct: 233 QDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGA 292
Query: 1048 SLTSTTKKGFTPLHLTGKYGHIKVAKLL 1075
L + +G PL + + + + LL
Sbjct: 293 DLGARDSEGRDPLTIAMETANADIVTLL 320
Score = 31.2 bits (69), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Query: 20 INTINPFGSHFQHNITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHE 79
+N +N Q N TPL A LL GAN++ G LH A GH
Sbjct: 226 VNWVN----GGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHT 281
Query: 80 AVIEMLLEQGAPISSK 95
+ + L++GA + ++
Sbjct: 282 GLACLFLKRGADLGAR 297
Score = 30.4 bits (67), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 39/97 (40%), Gaps = 13/97 (13%)
Query: 1058 TPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDI 1117
TPL + + LLQ A V+ G PLH A+ H +A L L++GA +
Sbjct: 237 TPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADL-- 294
Query: 1118 ATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAML 1154
A G PL ++ +AD+ +L
Sbjct: 295 -----------GARDSEGRDPLTIAMETANADIVTLL 320
Score = 30.4 bits (67), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 47/129 (36%), Gaps = 14/129 (10%)
Query: 114 MLLEQGAPISSKTKVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPV- 172
+ G P S T A+ + + + TPL + + LLQ A V
Sbjct: 203 LFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVN 262
Query: 173 --DFQGKAPVDDVTVDYLTALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKK 230
D G+ P LH A GH +A L + AD AR G PL IA +
Sbjct: 263 QADSAGRGP-----------LHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMET 311
Query: 231 NRIKVVELL 239
+V LL
Sbjct: 312 ANADIVTLL 320
>pdb|4F1P|A Chain A, Crystal Structure Of Mutant S554d For Arfgap And Ank Repeat
Domain Of Acap1
pdb|4F1P|B Chain B, Crystal Structure Of Mutant S554d For Arfgap And Ank Repeat
Domain Of Acap1
Length = 368
Score = 39.7 bits (91), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
Query: 1251 YTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPN-ATNKGFTPLHHSAQQGHSTIVALL 1309
+ N TPL + LL GA+ N A + G PLHH+ GH+ + L
Sbjct: 228 WVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLF 287
Query: 1310 LDRGASPNATNKTRGFTPLHIACHYGQISMARLL 1343
L RGA A + + G PL IA + LL
Sbjct: 288 LKRGADLGARD-SEGRDPLTIAMETANADIVTLL 320
Score = 38.9 bits (89), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 1155 LEHGADVS--HAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYG 1212
L HGADV+ + ++ TPL + + E LL+N A V+ G PLH A G
Sbjct: 220 LAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILG 279
Query: 1213 QISMARLLLDQSANV 1227
+A L L + A++
Sbjct: 280 HTGLACLFLKRGADL 294
Score = 38.9 bits (89), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 2/101 (1%)
Query: 1010 LQHGAAVD--STTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYG 1067
L HGA V+ + +D T L A LL+NGA++ G PLH G
Sbjct: 220 LAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILG 279
Query: 1068 HIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLL 1108
H +A L L++ A + + G PL +A + ++ LL
Sbjct: 280 HTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLL 320
Score = 37.7 bits (86), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 42/107 (39%), Gaps = 8/107 (7%)
Query: 1284 PNATNKGFTPLHHSA----QQGHSTIVALLLD---RGASPNATNKTR-GFTPLHIACHYG 1335
P ++ LH A GH + + D GA N N + TPL A
Sbjct: 187 PEPPSEDLGSLHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAAN 246
Query: 1336 QISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGAS 1382
+ LL ANV+ G PLHH+ GH+ + L L RGA
Sbjct: 247 SLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGAD 293
Score = 35.8 bits (81), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 66/144 (45%), Gaps = 12/144 (8%)
Query: 171 PVDFQGKA--PVDDVTVDYLTALHVAAHCGHARVAKTLLDKKA-DPNARALNGF----TP 223
P D + K P +D+ + AL A GH T+ D A + +NG TP
Sbjct: 180 PGDLRSKPEPPSEDLGSLHPGALLFRAS-GHPPSLPTMADALAHGADVNWVNGGQDNATP 238
Query: 224 LHIACKKNRIKVVELLLKHGASI-EATTEVREPMLHIACKKNRIKVVELLLKHGASIEA- 281
L A N + E LL++GA++ +A + R P LH A + L LK GA + A
Sbjct: 239 LIQATAANSLLACEFLLQNGANVNQADSAGRGP-LHHATILGHTGLACLFLKRGADLGAR 297
Query: 282 TTEVREPMLHIACKKNRIKVVELL 305
+E R+P L IA + +V LL
Sbjct: 298 DSEGRDP-LTIAMETANADIVTLL 320
Score = 35.4 bits (80), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 31/67 (46%)
Query: 1121 LLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDR 1180
LL+ GA N AG PLH + GH ++ + L+ GAD+ G PL + +
Sbjct: 254 LLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETAN 313
Query: 1181 VGVAELL 1187
+ LL
Sbjct: 314 ADIVTLL 320
Score = 35.0 bits (79), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 31/68 (45%)
Query: 1153 MLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYG 1212
LL++GA+V+ A G PLH G+A L LK A + +G PL IA
Sbjct: 253 FLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETA 312
Query: 1213 QISMARLL 1220
+ LL
Sbjct: 313 NADIVTLL 320
Score = 33.9 bits (76), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 240 LKHGASIEATTEVRE---PMLHIACKKNRIKVVELLLKHGASI-EATTEVREPMLHIACK 295
L HGA + ++ P++ A N + E LL++GA++ +A + R P LH A
Sbjct: 220 LAHGADVNWVNGGQDNATPLIQ-ATAANSLLACEFLLQNGANVNQADSAGRGP-LHHATI 277
Query: 296 KNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKVVELL 338
+ L LK GA + A +E R+P L IA + +V LL
Sbjct: 278 LGHTGLACLFLKRGADLGARDSEGRDP-LTIAMETANADIVTLL 320
Score = 33.9 bits (76), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 273 LKHGASIEATTEVRE---PMLHIACKKNRIKVVELLLKHGASI-EATTEVREPMLHIACK 328
L HGA + ++ P++ A N + E LL++GA++ +A + R P LH A
Sbjct: 220 LAHGADVNWVNGGQDNATPLIQ-ATAANSLLACEFLLQNGANVNQADSAGRGP-LHHATI 277
Query: 329 KNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKVVELL 371
+ L LK GA + A +E R+P L IA + +V LL
Sbjct: 278 LGHTGLACLFLKRGADLGARDSEGRDP-LTIAMETANADIVTLL 320
Score = 33.9 bits (76), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 306 LKHGASIEATTEVRE---PMLHIACKKNRIKVVELLLKHGASI-EATTEVREPMLHIACK 361
L HGA + ++ P++ A N + E LL++GA++ +A + R P LH A
Sbjct: 220 LAHGADVNWVNGGQDNATPLIQ-ATAANSLLACEFLLQNGANVNQADSAGRGP-LHHATI 277
Query: 362 KNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKVVELL 404
+ L LK GA + A +E R+P L IA + +V LL
Sbjct: 278 LGHTGLACLFLKRGADLGARDSEGRDP-LTIAMETANADIVTLL 320
Score = 33.9 bits (76), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 339 LKHGASIEATTEVRE---PMLHIACKKNRIKVVELLLKHGASI-EATTEVREPMLHIACK 394
L HGA + ++ P++ A N + E LL++GA++ +A + R P LH A
Sbjct: 220 LAHGADVNWVNGGQDNATPLIQ-ATAANSLLACEFLLQNGANVNQADSAGRGP-LHHATI 277
Query: 395 KNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKVVELL 437
+ L LK GA + A +E R+P L IA + +V LL
Sbjct: 278 LGHTGLACLFLKRGADLGARDSEGRDP-LTIAMETANADIVTLL 320
Score = 33.9 bits (76), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 372 LKHGASIEATTEVRE---PMLHIACKKNRIKVVELLLKHGASI-EATTEVREPMLHIACK 427
L HGA + ++ P++ A N + E LL++GA++ +A + R P LH A
Sbjct: 220 LAHGADVNWVNGGQDNATPLIQ-ATAANSLLACEFLLQNGANVNQADSAGRGP-LHHATI 277
Query: 428 KNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKVVELL 470
+ L LK GA + A +E R+P L IA + +V LL
Sbjct: 278 LGHTGLACLFLKRGADLGARDSEGRDP-LTIAMETANADIVTLL 320
Score = 33.9 bits (76), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 405 LKHGASIEATTEVRE---PMLHIACKKNRIKVVELLLKHGASI-EATTEVREPMLHIACK 460
L HGA + ++ P++ A N + E LL++GA++ +A + R P LH A
Sbjct: 220 LAHGADVNWVNGGQDNATPLIQ-ATAANSLLACEFLLQNGANVNQADSAGRGP-LHHATI 277
Query: 461 KNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKVVELL 503
+ L LK GA + A +E R+P L IA + +V LL
Sbjct: 278 LGHTGLACLFLKRGADLGARDSEGRDP-LTIAMETANADIVTLL 320
Score = 33.9 bits (76), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 438 LKHGASIEATTEVRE---PMLHIACKKNRIKVVELLLKHGASI-EATTEVREPMLHIACK 493
L HGA + ++ P++ A N + E LL++GA++ +A + R P LH A
Sbjct: 220 LAHGADVNWVNGGQDNATPLIQ-ATAANSLLACEFLLQNGANVNQADSAGRGP-LHHATI 277
Query: 494 KNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKVVELL 536
+ L LK GA + A +E R+P L IA + +V LL
Sbjct: 278 LGHTGLACLFLKRGADLGARDSEGRDP-LTIAMETANADIVTLL 320
Score = 33.9 bits (76), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 471 LKHGASIEATTEVRE---PMLHIACKKNRIKVVELLLKHGASI-EATTEVREPMLHIACK 526
L HGA + ++ P++ A N + E LL++GA++ +A + R P LH A
Sbjct: 220 LAHGADVNWVNGGQDNATPLIQ-ATAANSLLACEFLLQNGANVNQADSAGRGP-LHHATI 277
Query: 527 KNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKVVELL 569
+ L LK GA + A +E R+P L IA + +V LL
Sbjct: 278 LGHTGLACLFLKRGADLGARDSEGRDP-LTIAMETANADIVTLL 320
Score = 33.9 bits (76), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 504 LKHGASIEATTEVRE---PMLHIACKKNRIKVVELLLKHGASI-EATTEVREPMLHIACK 559
L HGA + ++ P++ A N + E LL++GA++ +A + R P LH A
Sbjct: 220 LAHGADVNWVNGGQDNATPLIQ-ATAANSLLACEFLLQNGANVNQADSAGRGP-LHHATI 277
Query: 560 KNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKVVELL 602
+ L LK GA + A +E R+P L IA + +V LL
Sbjct: 278 LGHTGLACLFLKRGADLGARDSEGRDP-LTIAMETANADIVTLL 320
Score = 33.9 bits (76), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 537 LKHGASIEATTEVRE---PMLHIACKKNRIKVVELLLKHGASI-EATTEVREPMLHIACK 592
L HGA + ++ P++ A N + E LL++GA++ +A + R P LH A
Sbjct: 220 LAHGADVNWVNGGQDNATPLIQ-ATAANSLLACEFLLQNGANVNQADSAGRGP-LHHATI 277
Query: 593 KNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKVVELL 635
+ L LK GA + A +E R+P L IA + +V LL
Sbjct: 278 LGHTGLACLFLKRGADLGARDSEGRDP-LTIAMETANADIVTLL 320
Score = 33.9 bits (76), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 570 LKHGASIEATTEVRE---PMLHIACKKNRIKVVELLLKHGASI-EATTEVREPMLHIACK 625
L HGA + ++ P++ A N + E LL++GA++ +A + R P LH A
Sbjct: 220 LAHGADVNWVNGGQDNATPLIQ-ATAANSLLACEFLLQNGANVNQADSAGRGP-LHHATI 277
Query: 626 KNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKVVELL 668
+ L LK GA + A +E R+P L IA + +V LL
Sbjct: 278 LGHTGLACLFLKRGADLGARDSEGRDP-LTIAMETANADIVTLL 320
Score = 33.9 bits (76), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 603 LKHGASIEATTEVRE---PMLHIACKKNRIKVVELLLKHGASI-EATTEVREPMLHIACK 658
L HGA + ++ P++ A N + E LL++GA++ +A + R P LH A
Sbjct: 220 LAHGADVNWVNGGQDNATPLIQ-ATAANSLLACEFLLQNGANVNQADSAGRGP-LHHATI 277
Query: 659 KNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKVVELL 701
+ L LK GA + A +E R+P L IA + +V LL
Sbjct: 278 LGHTGLACLFLKRGADLGARDSEGRDP-LTIAMETANADIVTLL 320
Score = 33.9 bits (76), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 636 LKHGASIEATTEVRE---PMLHIACKKNRIKVVELLLKHGASI-EATTEVREPMLHIACK 691
L HGA + ++ P++ A N + E LL++GA++ +A + R P LH A
Sbjct: 220 LAHGADVNWVNGGQDNATPLIQ-ATAANSLLACEFLLQNGANVNQADSAGRGP-LHHATI 277
Query: 692 KNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKVVELL 734
+ L LK GA + A +E R+P L IA + +V LL
Sbjct: 278 LGHTGLACLFLKRGADLGARDSEGRDP-LTIAMETANADIVTLL 320
Score = 33.9 bits (76), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 669 LKHGASIEATTEVRE---PMLHIACKKNRIKVVELLLKHGASI-EATTEVREPMLHIACK 724
L HGA + ++ P++ A N + E LL++GA++ +A + R P LH A
Sbjct: 220 LAHGADVNWVNGGQDNATPLIQ-ATAANSLLACEFLLQNGANVNQADSAGRGP-LHHATI 277
Query: 725 KNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKVVELL 767
+ L LK GA + A +E R+P L IA + +V LL
Sbjct: 278 LGHTGLACLFLKRGADLGARDSEGRDP-LTIAMETANADIVTLL 320
Score = 33.9 bits (76), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 702 LKHGASIEATTEVRE---PMLHIACKKNRIKVVELLLKHGASI-EATTEVREPMLHIACK 757
L HGA + ++ P++ A N + E LL++GA++ +A + R P LH A
Sbjct: 220 LAHGADVNWVNGGQDNATPLIQ-ATAANSLLACEFLLQNGANVNQADSAGRGP-LHHATI 277
Query: 758 KNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKVVELL 800
+ L LK GA + A +E R+P L IA + +V LL
Sbjct: 278 LGHTGLACLFLKRGADLGARDSEGRDP-LTIAMETANADIVTLL 320
Score = 33.9 bits (76), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 735 LKHGASIEATTEVRE---PMLHIACKKNRIKVVELLLKHGASI-EATTEVREPMLHIACK 790
L HGA + ++ P++ A N + E LL++GA++ +A + R P LH A
Sbjct: 220 LAHGADVNWVNGGQDNATPLIQ-ATAANSLLACEFLLQNGANVNQADSAGRGP-LHHATI 277
Query: 791 KNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKVVELL 833
+ L LK GA + A +E R+P L IA + +V LL
Sbjct: 278 LGHTGLACLFLKRGADLGARDSEGRDP-LTIAMETANADIVTLL 320
Score = 33.9 bits (76), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 768 LKHGASIEATTEVRE---PMLHIACKKNRIKVVELLLKHGASI-EATTEVREPMLHIACK 823
L HGA + ++ P++ A N + E LL++GA++ +A + R P LH A
Sbjct: 220 LAHGADVNWVNGGQDNATPLIQ-ATAANSLLACEFLLQNGANVNQADSAGRGP-LHHATI 277
Query: 824 KNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKVVELL 866
+ L LK GA + A +E R+P L IA + +V LL
Sbjct: 278 LGHTGLACLFLKRGADLGARDSEGRDP-LTIAMETANADIVTLL 320
Score = 33.9 bits (76), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 801 LKHGASIEATTEVRE---PMLHIACKKNRIKVVELLLKHGASI-EATTEVREPMLHIACK 856
L HGA + ++ P++ A N + E LL++GA++ +A + R P LH A
Sbjct: 220 LAHGADVNWVNGGQDNATPLIQ-ATAANSLLACEFLLQNGANVNQADSAGRGP-LHHATI 277
Query: 857 KNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKVVELL 899
+ L LK GA + A +E R+P L IA + +V LL
Sbjct: 278 LGHTGLACLFLKRGADLGARDSEGRDP-LTIAMETANADIVTLL 320
Score = 33.9 bits (76), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 834 LKHGASIEATTEVRE---PMLHIACKKNRIKVVELLLKHGASI-EATTEVREPMLHIACK 889
L HGA + ++ P++ A N + E LL++GA++ +A + R P LH A
Sbjct: 220 LAHGADVNWVNGGQDNATPLIQ-ATAANSLLACEFLLQNGANVNQADSAGRGP-LHHATI 277
Query: 890 KNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKVVELL 932
+ L LK GA + A +E R+P L IA + +V LL
Sbjct: 278 LGHTGLACLFLKRGADLGARDSEGRDP-LTIAMETANADIVTLL 320
Score = 33.1 bits (74), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 131 VLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPV---DFQGKAP----VDDV 183
LL+NGA++ G PLH GH +A L L++ A + D +G+ P ++
Sbjct: 253 FLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETA 312
Query: 184 TVDYLTALHVA 194
D +T L +A
Sbjct: 313 NADIVTLLRLA 323
Score = 32.3 bits (72), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 40/88 (45%)
Query: 988 REQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGA 1047
++ TPL A+ ++ LLQ+GA V+ LH A G +A + L+ GA
Sbjct: 233 QDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGA 292
Query: 1048 SLTSTTKKGFTPLHLTGKYGHIKVAKLL 1075
L + +G PL + + + + LL
Sbjct: 293 DLGARDSEGRDPLTIAMETANADIVTLL 320
Score = 31.2 bits (69), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Query: 20 INTINPFGSHFQHNITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHE 79
+N +N Q N TPL A LL GAN++ G LH A GH
Sbjct: 226 VNWVN----GGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHT 281
Query: 80 AVIEMLLEQGAPISSK 95
+ + L++GA + ++
Sbjct: 282 GLACLFLKRGADLGAR 297
Score = 30.8 bits (68), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 39/97 (40%), Gaps = 13/97 (13%)
Query: 1058 TPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDI 1117
TPL + + LLQ A V+ G PLH A+ H +A L L++GA +
Sbjct: 237 TPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADL-- 294
Query: 1118 ATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAML 1154
A G PL ++ +AD+ +L
Sbjct: 295 -----------GARDSEGRDPLTIAMETANADIVTLL 320
Score = 30.4 bits (67), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 47/129 (36%), Gaps = 14/129 (10%)
Query: 114 MLLEQGAPISSKTKVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPV- 172
+ G P S T A+ + + + TPL + + LLQ A V
Sbjct: 203 LFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVN 262
Query: 173 --DFQGKAPVDDVTVDYLTALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKK 230
D G+ P LH A GH +A L + AD AR G PL IA +
Sbjct: 263 QADSAGRGP-----------LHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMET 311
Query: 231 NRIKVVELL 239
+V LL
Sbjct: 312 ANADIVTLL 320
>pdb|3JUE|A Chain A, Crystal Structure Of Arfgap And Ank Repeat Domain Of Acap1
pdb|3JUE|B Chain B, Crystal Structure Of Arfgap And Ank Repeat Domain Of Acap1
Length = 368
Score = 39.7 bits (91), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
Query: 1251 YTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPN-ATNKGFTPLHHSAQQGHSTIVALL 1309
+ N TPL + LL GA+ N A + G PLHH+ GH+ + L
Sbjct: 228 WVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLF 287
Query: 1310 LDRGASPNATNKTRGFTPLHIACHYGQISMARLL 1343
L RGA A + + G PL IA + LL
Sbjct: 288 LKRGADLGARD-SEGRDPLTIAMETANADIVTLL 320
Score = 38.9 bits (89), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 1155 LEHGADVS--HAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYG 1212
L HGADV+ + ++ TPL + + E LL+N A V+ G PLH A G
Sbjct: 220 LAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILG 279
Query: 1213 QISMARLLLDQSANV 1227
+A L L + A++
Sbjct: 280 HTGLACLFLKRGADL 294
Score = 38.9 bits (89), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 2/101 (1%)
Query: 1010 LQHGAAVD--STTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYG 1067
L HGA V+ + +D T L A LL+NGA++ G PLH G
Sbjct: 220 LAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILG 279
Query: 1068 HIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLL 1108
H +A L L++ A + + G PL +A + ++ LL
Sbjct: 280 HTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLL 320
Score = 37.7 bits (86), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 42/107 (39%), Gaps = 8/107 (7%)
Query: 1284 PNATNKGFTPLHHSA----QQGHSTIVALLLD---RGASPNATNKTR-GFTPLHIACHYG 1335
P ++ LH A GH + + D GA N N + TPL A
Sbjct: 187 PEPPSEDLGSLHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAAN 246
Query: 1336 QISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGAS 1382
+ LL ANV+ G PLHH+ GH+ + L L RGA
Sbjct: 247 SLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGAD 293
Score = 35.4 bits (80), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 31/67 (46%)
Query: 1121 LLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDR 1180
LL+ GA N AG PLH + GH ++ + L+ GAD+ G PL + +
Sbjct: 254 LLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETAN 313
Query: 1181 VGVAELL 1187
+ LL
Sbjct: 314 ADIVTLL 320
Score = 35.0 bits (79), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 31/68 (45%)
Query: 1153 MLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYG 1212
LL++GA+V+ A G PLH G+A L LK A + +G PL IA
Sbjct: 253 FLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETA 312
Query: 1213 QISMARLL 1220
+ LL
Sbjct: 313 NADIVTLL 320
Score = 35.0 bits (79), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 222 TPLHIACKKNRIKVVELLLKHGASI-EATTEVREPMLHIACKKNRIKVVELLLKHGASIE 280
TPL A N + E LL++GA++ +A + R P LH A + L LK GA +
Sbjct: 237 TPLIQATAANSLLACEFLLQNGANVNQADSAGRGP-LHHATILGHTGLACLFLKRGADLG 295
Query: 281 A-TTEVREPMLHIACKKNRIKVVELL 305
A +E R+P L IA + +V LL
Sbjct: 296 ARDSEGRDP-LTIAMETANADIVTLL 320
Score = 33.9 bits (76), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 240 LKHGASIEATTEVRE---PMLHIACKKNRIKVVELLLKHGASI-EATTEVREPMLHIACK 295
L HGA + ++ P++ A N + E LL++GA++ +A + R P LH A
Sbjct: 220 LAHGADVNWVNGGQDNATPLIQ-ATAANSLLACEFLLQNGANVNQADSAGRGP-LHHATI 277
Query: 296 KNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKVVELL 338
+ L LK GA + A +E R+P L IA + +V LL
Sbjct: 278 LGHTGLACLFLKRGADLGARDSEGRDP-LTIAMETANADIVTLL 320
Score = 33.9 bits (76), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 273 LKHGASIEATTEVRE---PMLHIACKKNRIKVVELLLKHGASI-EATTEVREPMLHIACK 328
L HGA + ++ P++ A N + E LL++GA++ +A + R P LH A
Sbjct: 220 LAHGADVNWVNGGQDNATPLIQ-ATAANSLLACEFLLQNGANVNQADSAGRGP-LHHATI 277
Query: 329 KNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKVVELL 371
+ L LK GA + A +E R+P L IA + +V LL
Sbjct: 278 LGHTGLACLFLKRGADLGARDSEGRDP-LTIAMETANADIVTLL 320
Score = 33.9 bits (76), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 306 LKHGASIEATTEVRE---PMLHIACKKNRIKVVELLLKHGASI-EATTEVREPMLHIACK 361
L HGA + ++ P++ A N + E LL++GA++ +A + R P LH A
Sbjct: 220 LAHGADVNWVNGGQDNATPLIQ-ATAANSLLACEFLLQNGANVNQADSAGRGP-LHHATI 277
Query: 362 KNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKVVELL 404
+ L LK GA + A +E R+P L IA + +V LL
Sbjct: 278 LGHTGLACLFLKRGADLGARDSEGRDP-LTIAMETANADIVTLL 320
Score = 33.9 bits (76), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 339 LKHGASIEATTEVRE---PMLHIACKKNRIKVVELLLKHGASI-EATTEVREPMLHIACK 394
L HGA + ++ P++ A N + E LL++GA++ +A + R P LH A
Sbjct: 220 LAHGADVNWVNGGQDNATPLIQ-ATAANSLLACEFLLQNGANVNQADSAGRGP-LHHATI 277
Query: 395 KNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKVVELL 437
+ L LK GA + A +E R+P L IA + +V LL
Sbjct: 278 LGHTGLACLFLKRGADLGARDSEGRDP-LTIAMETANADIVTLL 320
Score = 33.9 bits (76), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 372 LKHGASIEATTEVRE---PMLHIACKKNRIKVVELLLKHGASI-EATTEVREPMLHIACK 427
L HGA + ++ P++ A N + E LL++GA++ +A + R P LH A
Sbjct: 220 LAHGADVNWVNGGQDNATPLIQ-ATAANSLLACEFLLQNGANVNQADSAGRGP-LHHATI 277
Query: 428 KNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKVVELL 470
+ L LK GA + A +E R+P L IA + +V LL
Sbjct: 278 LGHTGLACLFLKRGADLGARDSEGRDP-LTIAMETANADIVTLL 320
Score = 33.9 bits (76), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 405 LKHGASIEATTEVRE---PMLHIACKKNRIKVVELLLKHGASI-EATTEVREPMLHIACK 460
L HGA + ++ P++ A N + E LL++GA++ +A + R P LH A
Sbjct: 220 LAHGADVNWVNGGQDNATPLIQ-ATAANSLLACEFLLQNGANVNQADSAGRGP-LHHATI 277
Query: 461 KNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKVVELL 503
+ L LK GA + A +E R+P L IA + +V LL
Sbjct: 278 LGHTGLACLFLKRGADLGARDSEGRDP-LTIAMETANADIVTLL 320
Score = 33.9 bits (76), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 438 LKHGASIEATTEVRE---PMLHIACKKNRIKVVELLLKHGASI-EATTEVREPMLHIACK 493
L HGA + ++ P++ A N + E LL++GA++ +A + R P LH A
Sbjct: 220 LAHGADVNWVNGGQDNATPLIQ-ATAANSLLACEFLLQNGANVNQADSAGRGP-LHHATI 277
Query: 494 KNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKVVELL 536
+ L LK GA + A +E R+P L IA + +V LL
Sbjct: 278 LGHTGLACLFLKRGADLGARDSEGRDP-LTIAMETANADIVTLL 320
Score = 33.9 bits (76), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 471 LKHGASIEATTEVRE---PMLHIACKKNRIKVVELLLKHGASI-EATTEVREPMLHIACK 526
L HGA + ++ P++ A N + E LL++GA++ +A + R P LH A
Sbjct: 220 LAHGADVNWVNGGQDNATPLIQ-ATAANSLLACEFLLQNGANVNQADSAGRGP-LHHATI 277
Query: 527 KNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKVVELL 569
+ L LK GA + A +E R+P L IA + +V LL
Sbjct: 278 LGHTGLACLFLKRGADLGARDSEGRDP-LTIAMETANADIVTLL 320
Score = 33.9 bits (76), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 504 LKHGASIEATTEVRE---PMLHIACKKNRIKVVELLLKHGASI-EATTEVREPMLHIACK 559
L HGA + ++ P++ A N + E LL++GA++ +A + R P LH A
Sbjct: 220 LAHGADVNWVNGGQDNATPLIQ-ATAANSLLACEFLLQNGANVNQADSAGRGP-LHHATI 277
Query: 560 KNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKVVELL 602
+ L LK GA + A +E R+P L IA + +V LL
Sbjct: 278 LGHTGLACLFLKRGADLGARDSEGRDP-LTIAMETANADIVTLL 320
Score = 33.9 bits (76), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 537 LKHGASIEATTEVRE---PMLHIACKKNRIKVVELLLKHGASI-EATTEVREPMLHIACK 592
L HGA + ++ P++ A N + E LL++GA++ +A + R P LH A
Sbjct: 220 LAHGADVNWVNGGQDNATPLIQ-ATAANSLLACEFLLQNGANVNQADSAGRGP-LHHATI 277
Query: 593 KNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKVVELL 635
+ L LK GA + A +E R+P L IA + +V LL
Sbjct: 278 LGHTGLACLFLKRGADLGARDSEGRDP-LTIAMETANADIVTLL 320
Score = 33.9 bits (76), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 570 LKHGASIEATTEVRE---PMLHIACKKNRIKVVELLLKHGASI-EATTEVREPMLHIACK 625
L HGA + ++ P++ A N + E LL++GA++ +A + R P LH A
Sbjct: 220 LAHGADVNWVNGGQDNATPLIQ-ATAANSLLACEFLLQNGANVNQADSAGRGP-LHHATI 277
Query: 626 KNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKVVELL 668
+ L LK GA + A +E R+P L IA + +V LL
Sbjct: 278 LGHTGLACLFLKRGADLGARDSEGRDP-LTIAMETANADIVTLL 320
Score = 33.9 bits (76), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 603 LKHGASIEATTEVRE---PMLHIACKKNRIKVVELLLKHGASI-EATTEVREPMLHIACK 658
L HGA + ++ P++ A N + E LL++GA++ +A + R P LH A
Sbjct: 220 LAHGADVNWVNGGQDNATPLIQ-ATAANSLLACEFLLQNGANVNQADSAGRGP-LHHATI 277
Query: 659 KNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKVVELL 701
+ L LK GA + A +E R+P L IA + +V LL
Sbjct: 278 LGHTGLACLFLKRGADLGARDSEGRDP-LTIAMETANADIVTLL 320
Score = 33.9 bits (76), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 636 LKHGASIEATTEVRE---PMLHIACKKNRIKVVELLLKHGASI-EATTEVREPMLHIACK 691
L HGA + ++ P++ A N + E LL++GA++ +A + R P LH A
Sbjct: 220 LAHGADVNWVNGGQDNATPLIQ-ATAANSLLACEFLLQNGANVNQADSAGRGP-LHHATI 277
Query: 692 KNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKVVELL 734
+ L LK GA + A +E R+P L IA + +V LL
Sbjct: 278 LGHTGLACLFLKRGADLGARDSEGRDP-LTIAMETANADIVTLL 320
Score = 33.9 bits (76), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 669 LKHGASIEATTEVRE---PMLHIACKKNRIKVVELLLKHGASI-EATTEVREPMLHIACK 724
L HGA + ++ P++ A N + E LL++GA++ +A + R P LH A
Sbjct: 220 LAHGADVNWVNGGQDNATPLIQ-ATAANSLLACEFLLQNGANVNQADSAGRGP-LHHATI 277
Query: 725 KNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKVVELL 767
+ L LK GA + A +E R+P L IA + +V LL
Sbjct: 278 LGHTGLACLFLKRGADLGARDSEGRDP-LTIAMETANADIVTLL 320
Score = 33.9 bits (76), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 702 LKHGASIEATTEVRE---PMLHIACKKNRIKVVELLLKHGASI-EATTEVREPMLHIACK 757
L HGA + ++ P++ A N + E LL++GA++ +A + R P LH A
Sbjct: 220 LAHGADVNWVNGGQDNATPLIQ-ATAANSLLACEFLLQNGANVNQADSAGRGP-LHHATI 277
Query: 758 KNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKVVELL 800
+ L LK GA + A +E R+P L IA + +V LL
Sbjct: 278 LGHTGLACLFLKRGADLGARDSEGRDP-LTIAMETANADIVTLL 320
Score = 33.9 bits (76), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 735 LKHGASIEATTEVRE---PMLHIACKKNRIKVVELLLKHGASI-EATTEVREPMLHIACK 790
L HGA + ++ P++ A N + E LL++GA++ +A + R P LH A
Sbjct: 220 LAHGADVNWVNGGQDNATPLIQ-ATAANSLLACEFLLQNGANVNQADSAGRGP-LHHATI 277
Query: 791 KNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKVVELL 833
+ L LK GA + A +E R+P L IA + +V LL
Sbjct: 278 LGHTGLACLFLKRGADLGARDSEGRDP-LTIAMETANADIVTLL 320
Score = 33.9 bits (76), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 768 LKHGASIEATTEVRE---PMLHIACKKNRIKVVELLLKHGASI-EATTEVREPMLHIACK 823
L HGA + ++ P++ A N + E LL++GA++ +A + R P LH A
Sbjct: 220 LAHGADVNWVNGGQDNATPLIQ-ATAANSLLACEFLLQNGANVNQADSAGRGP-LHHATI 277
Query: 824 KNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKVVELL 866
+ L LK GA + A +E R+P L IA + +V LL
Sbjct: 278 LGHTGLACLFLKRGADLGARDSEGRDP-LTIAMETANADIVTLL 320
Score = 33.9 bits (76), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 801 LKHGASIEATTEVRE---PMLHIACKKNRIKVVELLLKHGASI-EATTEVREPMLHIACK 856
L HGA + ++ P++ A N + E LL++GA++ +A + R P LH A
Sbjct: 220 LAHGADVNWVNGGQDNATPLIQ-ATAANSLLACEFLLQNGANVNQADSAGRGP-LHHATI 277
Query: 857 KNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKVVELL 899
+ L LK GA + A +E R+P L IA + +V LL
Sbjct: 278 LGHTGLACLFLKRGADLGARDSEGRDP-LTIAMETANADIVTLL 320
Score = 33.9 bits (76), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 834 LKHGASIEATTEVRE---PMLHIACKKNRIKVVELLLKHGASI-EATTEVREPMLHIACK 889
L HGA + ++ P++ A N + E LL++GA++ +A + R P LH A
Sbjct: 220 LAHGADVNWVNGGQDNATPLIQ-ATAANSLLACEFLLQNGANVNQADSAGRGP-LHHATI 277
Query: 890 KNRIKVVELLLKHGASIEA-TTEVREPMLHIACKKNRIKVVELL 932
+ L LK GA + A +E R+P L IA + +V LL
Sbjct: 278 LGHTGLACLFLKRGADLGARDSEGRDP-LTIAMETANADIVTLL 320
Score = 33.1 bits (74), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 131 VLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPV---DFQGKAP----VDDV 183
LL+NGA++ G PLH GH +A L L++ A + D +G+ P ++
Sbjct: 253 FLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETA 312
Query: 184 TVDYLTALHVA 194
D +T L +A
Sbjct: 313 NADIVTLLRLA 323
Score = 32.3 bits (72), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 40/88 (45%)
Query: 988 REQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGA 1047
++ TPL A+ ++ LLQ+GA V+ LH A G +A + L+ GA
Sbjct: 233 QDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGA 292
Query: 1048 SLTSTTKKGFTPLHLTGKYGHIKVAKLL 1075
L + +G PL + + + + LL
Sbjct: 293 DLGARDSEGRDPLTIAMETANADIVTLL 320
Score = 31.2 bits (69), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Query: 20 INTINPFGSHFQHNITPLHVAAKWGKANMVTLLLSRGANIDNKTRDGLTALHCAARSGHE 79
+N +N Q N TPL A LL GAN++ G LH A GH
Sbjct: 226 VNWVN----GGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHT 281
Query: 80 AVIEMLLEQGAPISSK 95
+ + L++GA + ++
Sbjct: 282 GLACLFLKRGADLGAR 297
Score = 30.8 bits (68), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 39/97 (40%), Gaps = 13/97 (13%)
Query: 1058 TPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDI 1117
TPL + + LLQ A V+ G PLH A+ H +A L L++GA +
Sbjct: 237 TPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADL-- 294
Query: 1118 ATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAML 1154
A G PL ++ +AD+ +L
Sbjct: 295 -----------GARDSEGRDPLTIAMETANADIVTLL 320
Score = 30.8 bits (68), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 47/129 (36%), Gaps = 14/129 (10%)
Query: 114 MLLEQGAPISSKTKVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPV- 172
+ G P S T A+ + + + TPL + + LLQ A V
Sbjct: 203 LFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVN 262
Query: 173 --DFQGKAPVDDVTVDYLTALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKK 230
D G+ P LH A GH +A L + AD AR G PL IA +
Sbjct: 263 QADSAGRGP-----------LHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMET 311
Query: 231 NRIKVVELL 239
+V LL
Sbjct: 312 ANADIVTLL 320
>pdb|1DC2|A Chain A, Solution Nmr Structure Of Tumor Suppressor P16ink4a, 20
Structures
pdb|1A5E|A Chain A, Solution Nmr Structure Of Tumor Suppressor P16ink4a, 18
Structures
pdb|2A5E|A Chain A, Solution Nmr Structure Of Tumor Suppressor P16ink4a,
Restrained Minimized Mean Structure
Length = 156
Score = 39.3 bits (90), Expect = 0.018, Method: Composition-based stats.
Identities = 34/127 (26%), Positives = 50/127 (39%), Gaps = 2/127 (1%)
Query: 1262 LHHSAQQGHSTIVALLLDRGASPNATNK-GFTPLHHSAQQGHSTIVALLLDRGASPNATN 1320
L +A +G V LL+ GA PNA N G P+ G + + LLL GA PN +
Sbjct: 16 LATAAARGRVEEVRALLEAGALPNAPNSYGRRPIQ-VMMMGSARVAELLLLHGAEPNCAD 74
Query: 1321 KTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRG 1380
P+H A G + +L A + G P+ + + GH + L
Sbjct: 75 PATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAA 134
Query: 1381 ASPNATN 1387
+N
Sbjct: 135 GGTRGSN 141
Score = 35.4 bits (80), Expect = 0.25, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query: 1000 LGNVDIVMLLLQHGAAVD-STTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFT 1058
+G+ + LLL HGA + + L +H AA+EG + VL GA L G
Sbjct: 54 MGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRL 113
Query: 1059 PLHLTGKYGHIKVAKLL 1075
P+ L + GH VA+ L
Sbjct: 114 PVDLAEELGHRDVARYL 130
Score = 32.0 bits (71), Expect = 2.6, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 53/129 (41%), Gaps = 15/129 (11%)
Query: 1027 LHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQG 1086
L AA G+ E LLE GA + G P+ + G +VA+LLL A +
Sbjct: 16 LATAAARGRVEEVRALLEAGALPNAPNSYGRRPIQVM-MMGSARVAELLLLHGAEPNCAD 74
Query: 1087 KNGVT-PLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASE 1145
+T P+H A+ + ++L GA +D+ G P+ L+
Sbjct: 75 PATLTRPVHDAAREGFLDTLVVLHRAGARLDV-------------RDAWGRLPVDLAEEL 121
Query: 1146 GHADMSAML 1154
GH D++ L
Sbjct: 122 GHRDVARYL 130
>pdb|2NYJ|A Chain A, Crystal Structure Of The Ankyrin Repeat Domain Of Trpv1
pdb|2PNN|A Chain A, Crystal Structure Of The Ankyrin Repeat Domain Of Trpv1
Length = 273
Score = 36.2 bits (82), Expect = 0.12, Method: Composition-based stats.
Identities = 46/163 (28%), Positives = 65/163 (39%), Gaps = 37/163 (22%)
Query: 35 TPLHVAAKWGKANMVTLLLSRGANID----------NKTRDGL----TALHCAARSGHEA 80
T LH+A + +VTLL+ GA++ K R G L AA + A
Sbjct: 103 TALHIAIERRNXTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLA 162
Query: 81 VIEMLLE---QGAPISSKTKVRGFYILRSGHEAVIEMLLEQGAPISSKTKVAAV----LL 133
+++ LL+ Q A IS++ V V+ L+E TK +L
Sbjct: 163 IVKFLLQNSWQPADISARDSV---------GNTVLHALVEVADNTVDNTKFVTSXYNEIL 213
Query: 134 ENGASLTSTTK-------KGFTPLHLTGKYGHIKVAKLLLQKD 169
GA L T K KG TPL L G I V +LQ++
Sbjct: 214 ILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQRE 256
Score = 36.2 bits (82), Expect = 0.14, Method: Composition-based stats.
Identities = 40/163 (24%), Positives = 64/163 (39%), Gaps = 25/163 (15%)
Query: 1135 GFTPLHLSASEGHADMSAMLLEHGADVSHAAKN--------------GLTPLHLCAQEDR 1180
G T LH++ + + +L+E+GADV AA G PL L A ++
Sbjct: 101 GQTALHIAIERRNXTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQ 160
Query: 1181 VGVAELLLKNN---AQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRX 1237
+ + + LL+N+ A + G T LH + +A +D + VT N
Sbjct: 161 LAIVKFLLQNSWQPADISARDSVGNTVLH-----ALVEVADNTVDNTKFVTSXYN---EI 212
Query: 1238 XXXXXXXXXXXXXYTNTTDQGFTPLHHSAQQGHSTIVALLLDR 1280
T +G TPL +A G ++A +L R
Sbjct: 213 LILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQR 255
Score = 33.9 bits (76), Expect = 0.66, Method: Composition-based stats.
Identities = 48/203 (23%), Positives = 73/203 (35%), Gaps = 46/203 (22%)
Query: 1210 HYGQISMARLLLDQSANVTVPKNFPSRXXXXXXXXXXXXXXYTNTTDQGFTPLHHSAQQG 1269
H GQ LLLD + K F + YT++ +G T LH + ++
Sbjct: 66 HNGQNDTIALLLDVARKTDSLKQFVN-------------ASYTDSYYKGQTALHIAIERR 112
Query: 1270 HSTIVALLLDRGASPNATNK---------------GFTPLHHSAQQGHSTIVALLLDRGA 1314
+ T+V LL++ GA A G PL +A IV LL
Sbjct: 113 NXTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSW 172
Query: 1315 SPN--ATNKTRGFTPLH---------------IACHYGQISMARLLLDQSANV-SCTTDQ 1356
P + + G T LH + Y +I + L + + T +
Sbjct: 173 QPADISARDSVGNTVLHALVEVADNTVDNTKFVTSXYNEILILGAKLHPTLKLEEITNRK 232
Query: 1357 GFTPLHHSAQQGHSTIVALLLDR 1379
G TPL +A G ++A +L R
Sbjct: 233 GLTPLALAASSGKIGVLAYILQR 255
Score = 30.8 bits (68), Expect = 5.3, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 17/89 (19%)
Query: 220 GFTPLHIACKKNRIKVVELLLKHGASIEAT--------TEVR------EPMLHIACKKNR 265
G T LHIA ++ +V LL+++GA ++A T+ R E L +A N+
Sbjct: 101 GQTALHIAIERRNXTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQ 160
Query: 266 IKVVELLLKHG---ASIEATTEVREPMLH 291
+ +V+ LL++ A I A V +LH
Sbjct: 161 LAIVKFLLQNSWQPADISARDSVGNTVLH 189
Score = 30.8 bits (68), Expect = 5.5, Method: Composition-based stats.
Identities = 49/189 (25%), Positives = 68/189 (35%), Gaps = 59/189 (31%)
Query: 991 QTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLT 1050
QT LHIA N +V LL+++GA V + NG
Sbjct: 102 QTALHIAIERRNXTLVTLLVENGADVQAAA------------------------NGDFFK 137
Query: 1051 STTKK-----GFTPLHLTGKYGHIKVAKLLLQKD-APVDFQGKNGV--TPLH-------- 1094
T + G PL L + + K LLQ P D ++ V T LH
Sbjct: 138 KTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADN 197
Query: 1095 -------VASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGH 1147
V S Y+ +L+L GA + L E + G TPL L+AS G
Sbjct: 198 TVDNTKFVTSXYNE----ILIL--GAKLHPTLKLEEITNR------KGLTPLALAASSGK 245
Query: 1148 ADMSAMLLE 1156
+ A +L+
Sbjct: 246 IGVLAYILQ 254
Score = 30.0 bits (66), Expect = 9.3, Method: Composition-based stats.
Identities = 35/150 (23%), Positives = 69/150 (46%), Gaps = 22/150 (14%)
Query: 884 LHIACKKNRIKVVELLLKHGASIEAT--------TEVR------EPMLHIACKKNRIKVV 929
LHIA ++ +V LL+++GA ++A T+ R E L +A N++ +V
Sbjct: 105 LHIAIERRNXTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIV 164
Query: 930 ELLLKHGASSHVVSCYSNVKVHV--SLNKIQDVSSSILRLATC---DVL---PQCETRLN 981
+ LL++ +S +V V +L ++ D + + T ++L + L
Sbjct: 165 KFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSXYNEILILGAKLHPTLK 224
Query: 982 FSNLRVREQQTPLHIASRLGNVDIVMLLLQ 1011
+ R+ TPL +A+ G + ++ +LQ
Sbjct: 225 LEEITNRKGLTPLALAASSGKIGVLAYILQ 254
>pdb|3JXI|A Chain A, Crystal Structure Of The Chicken Trpv4 Ankyrin Repeat
Domain
pdb|3JXI|B Chain B, Crystal Structure Of The Chicken Trpv4 Ankyrin Repeat
Domain
pdb|3JXI|C Chain C, Crystal Structure Of The Chicken Trpv4 Ankyrin Repeat
Domain
pdb|3JXI|D Chain D, Crystal Structure Of The Chicken Trpv4 Ankyrin Repeat
Domain
pdb|3JXJ|A Chain A, Crystal Structure Of The Chicken Trpv4 Ankyrin Repeat
Domain
pdb|3JXJ|B Chain B, Crystal Structure Of The Chicken Trpv4 Ankyrin Repeat
Domain
Length = 260
Score = 31.6 bits (70), Expect = 3.0, Method: Composition-based stats.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
Query: 66 GLTALHCAARSGHEAVIEMLLEQGAPISSKTKVRGFYILRSGHEAVIEMLLEQGAPISSK 125
G TALH A + +E+L+E+GA + ++ + R F G L A +++
Sbjct: 93 GQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQ 152
Query: 126 TKVAAVLLENG---ASLTSTTKKGFTPLH 151
+ L ENG A L +G T LH
Sbjct: 153 PHIVHYLTENGHKQADLRRQDSRGNTVLH 181
>pdb|2ODL|A Chain A, Crystal Structure Of The Hmw1 Secretion Domain From
Haemophilus Influenzae
Length = 373
Score = 31.2 bits (69), Expect = 4.0, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 15/96 (15%)
Query: 996 IASRLGNVDIVMLLL--QHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTT 1053
I ++ GN+++ + Q + DS +KD + ++AKEG+ E+ V+ S +
Sbjct: 198 IFAKGGNINVRAATIRNQGKLSADSVSKDKSGNIVLSAKEGEAEIGGVI-----SAQNQQ 252
Query: 1054 KKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNG 1089
KG L +TG K+ L+ A +D GK G
Sbjct: 253 AKG-GKLXITGD-------KVTLKTGAVIDLSGKEG 280
>pdb|1SW6|A Chain A, S. Cerevisiae Swi6 Ankyrin-Repeat Fragment
pdb|1SW6|B Chain B, S. Cerevisiae Swi6 Ankyrin-Repeat Fragment
Length = 327
Score = 31.2 bits (69), Expect = 4.0, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 1129 NAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCA 1176
NA+ G T L+++A G+ + LL++GAD A K+GL P+ A
Sbjct: 277 NAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGA 324
Score = 30.8 bits (68), Expect = 6.2, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 981 NFSNLRVREQQTPLHIASRLGNVDIVMLLLQHGA 1014
N N + T L+IA+RLGN+ IV LL +GA
Sbjct: 274 NMLNAQDSNGDTCLNIAARLGNISIVDALLDYGA 307
>pdb|2OGE|A Chain A, X-Ray Structure Of S. Venezuelae Desv In Its Internal
Aldimine Form
pdb|2OGE|B Chain B, X-Ray Structure Of S. Venezuelae Desv In Its Internal
Aldimine Form
pdb|2OGE|C Chain C, X-Ray Structure Of S. Venezuelae Desv In Its Internal
Aldimine Form
pdb|2OGE|D Chain D, X-Ray Structure Of S. Venezuelae Desv In Its Internal
Aldimine Form
Length = 399
Score = 30.8 bits (68), Expect = 5.3, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 1290 GFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQ 1346
G TP+ + H T+ LL+++ +P +TR P+H+ H + R L D+
Sbjct: 124 GATPVPVEPHEDHPTLDPLLVEKAITP----RTRALLPVHLYGHPADMDALRELADR 176
>pdb|2OGA|A Chain A, X-Ray Crystal Structure Of S. Venezuelae Desv In Complex
With Ketimine Intermediate
pdb|2OGA|B Chain B, X-Ray Crystal Structure Of S. Venezuelae Desv In Complex
With Ketimine Intermediate
pdb|2OGA|C Chain C, X-Ray Crystal Structure Of S. Venezuelae Desv In Complex
With Ketimine Intermediate
pdb|2OGA|D Chain D, X-Ray Crystal Structure Of S. Venezuelae Desv In Complex
With Ketimine Intermediate
Length = 399
Score = 30.8 bits (68), Expect = 5.3, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 1290 GFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQ 1346
G TP+ + H T+ LL+++ +P +TR P+H+ H + R L D+
Sbjct: 124 GATPVPVEPHEDHPTLDPLLVEKAITP----RTRALLPVHLYGHPADMDALRELADR 176
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.132 0.374
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,594,676
Number of Sequences: 62578
Number of extensions: 1409144
Number of successful extensions: 10111
Number of sequences better than 100.0: 122
Number of HSP's better than 100.0 without gapping: 115
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 3856
Number of HSP's gapped (non-prelim): 3488
length of query: 1388
length of database: 14,973,337
effective HSP length: 111
effective length of query: 1277
effective length of database: 8,027,179
effective search space: 10250707583
effective search space used: 10250707583
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)