Query psy13737
Match_columns 1388
No_of_seqs 918 out of 5216
Neff 10.6
Searched_HMMs 29240
Date Fri Aug 16 19:16:15 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13737.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13737hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1n11_A Ankyrin; clathrin, BAND 100.0 1.4E-61 4.9E-66 581.9 49.4 397 902-1380 3-400 (437)
2 1n11_A Ankyrin; clathrin, BAND 100.0 3.3E-60 1.1E-64 570.0 48.1 395 869-1345 3-398 (437)
3 4g8k_A 2-5A-dependent ribonucl 100.0 1.8E-44 6.1E-49 416.0 35.8 299 1022-1386 24-330 (337)
4 4g8k_A 2-5A-dependent ribonucl 100.0 6.1E-45 2.1E-49 419.9 31.7 302 988-1320 23-331 (337)
5 1wdy_A 2-5A-dependent ribonucl 100.0 1.9E-41 6.6E-46 382.0 32.8 273 1088-1388 4-284 (285)
6 3utm_A Tankyrase-1; tankyrase, 100.0 9E-42 3.1E-46 397.9 29.0 294 988-1368 56-350 (351)
7 3utm_A Tankyrase-1; tankyrase, 100.0 5E-41 1.7E-45 391.6 33.1 308 988-1382 22-334 (351)
8 2fo1_E LIN-12 protein; beta-ba 100.0 3.4E-42 1.2E-46 400.8 22.3 319 990-1383 37-372 (373)
9 1wdy_A 2-5A-dependent ribonucl 100.0 1.3E-39 4.4E-44 367.1 33.9 262 989-1287 4-282 (285)
10 3d9h_A CDNA FLJ77766, highly s 100.0 4.6E-41 1.6E-45 375.2 21.6 229 1128-1385 52-282 (285)
11 1yyh_A HN1;, notch 1, ankyrin 100.0 5E-39 1.7E-43 352.8 24.1 232 1127-1383 2-249 (253)
12 3d9h_A CDNA FLJ77766, highly s 100.0 9E-39 3.1E-43 356.6 26.0 229 1082-1351 52-281 (285)
13 2xai_A ASB-9, ankyrin repeat a 100.0 1E-38 3.5E-43 351.9 22.6 249 1088-1377 2-258 (261)
14 2xai_A ASB-9, ankyrin repeat a 100.0 3.3E-38 1.1E-42 347.8 25.8 222 1134-1384 2-224 (261)
15 1k1a_A B-cell lymphoma 3-encod 100.0 4.6E-38 1.6E-42 343.9 22.8 233 1129-1382 3-241 (241)
16 3ljn_A Hypothetical protein; a 100.0 5.3E-39 1.8E-43 374.7 15.4 291 1013-1349 10-314 (364)
17 3ljn_A Hypothetical protein; a 100.0 3.3E-39 1.1E-43 376.5 13.0 282 984-1320 14-319 (364)
18 4b93_B Ankyrin repeat domain-c 100.0 1.1E-38 3.8E-43 350.2 15.9 231 1130-1385 6-247 (269)
19 3b7b_A Euchromatic histone-lys 100.0 6.2E-37 2.1E-41 333.6 28.9 228 1126-1378 2-231 (237)
20 2fo1_E LIN-12 protein; beta-ba 100.0 3.6E-38 1.2E-42 366.8 20.2 309 148-476 39-371 (373)
21 3aji_A 26S proteasome non-ATPa 100.0 9.8E-37 3.3E-41 330.5 25.4 227 1132-1383 3-231 (231)
22 1yyh_A HN1;, notch 1, ankyrin 100.0 9.5E-37 3.3E-41 334.6 24.0 229 1016-1280 3-245 (253)
23 1oy3_D Transcription factor in 100.0 2.3E-36 7.8E-41 339.6 24.3 240 1129-1369 3-270 (282)
24 3kea_A K1L; tropism, ANK repea 100.0 3.4E-37 1.1E-41 343.6 17.1 226 1127-1386 23-250 (285)
25 3eu9_A Huntingtin-interacting 100.0 7.8E-36 2.7E-40 326.2 26.6 236 1128-1387 2-240 (240)
26 1k1a_A B-cell lymphoma 3-encod 100.0 7.4E-36 2.5E-40 326.3 23.3 230 1020-1282 6-240 (241)
27 1oy3_D Transcription factor in 100.0 8.3E-36 2.8E-40 335.0 22.7 251 984-1270 3-270 (282)
28 3b7b_A Euchromatic histone-lys 100.0 6.6E-35 2.2E-39 317.6 28.3 202 1016-1229 4-205 (237)
29 4b93_B Ankyrin repeat domain-c 100.0 2.8E-36 9.7E-41 331.1 17.1 237 1051-1350 6-245 (269)
30 2f8y_A Notch homolog 1, transl 100.0 2.6E-35 9E-40 317.3 23.8 215 1146-1385 2-219 (223)
31 2dzn_A Probable 26S proteasome 100.0 4.3E-35 1.5E-39 317.0 22.6 217 1135-1379 2-227 (228)
32 3aji_A 26S proteasome non-ATPa 100.0 1E-34 3.6E-39 314.6 24.0 225 989-1226 5-230 (231)
33 1sw6_A Regulatory protein SWI6 100.0 1.3E-36 4.4E-41 346.2 6.6 276 1022-1368 22-327 (327)
34 1s70_B 130 kDa myosin-binding 100.0 7.6E-35 2.6E-39 329.9 20.7 249 1086-1380 37-288 (299)
35 3kea_A K1L; tropism, ANK repea 100.0 1.1E-34 3.7E-39 323.3 19.1 208 1004-1229 14-223 (285)
36 1s70_B 130 kDa myosin-binding 100.0 1.3E-33 4.3E-38 319.8 24.0 234 988-1222 38-285 (299)
37 3eu9_A Huntingtin-interacting 100.0 4.5E-33 1.5E-37 304.3 25.9 112 989-1100 8-120 (240)
38 2f8y_A Notch homolog 1, transl 100.0 2.8E-33 9.5E-38 301.4 23.3 211 1001-1224 2-214 (223)
39 2dzn_A Probable 26S proteasome 100.0 2.5E-33 8.5E-38 303.1 22.9 217 990-1222 2-226 (228)
40 1sw6_A Regulatory protein SWI6 100.0 3.5E-35 1.2E-39 334.3 7.1 282 891-1212 30-327 (327)
41 2rfa_A Transient receptor pote 100.0 4.9E-33 1.7E-37 301.4 22.0 199 1168-1386 3-226 (232)
42 1ikn_D Protein (I-kappa-B-alph 100.0 8.4E-34 2.9E-38 308.1 13.0 221 1129-1368 2-230 (236)
43 1ikn_D Protein (I-kappa-B-alph 100.0 1.2E-33 4E-38 306.9 12.1 198 1163-1384 3-211 (236)
44 4gpm_A Engineered protein OR26 100.0 4.5E-32 1.5E-36 272.6 20.8 158 1203-1385 6-164 (169)
45 2rfa_A Transient receptor pote 100.0 7.6E-32 2.6E-36 292.1 21.9 210 1134-1354 2-227 (232)
46 3hra_A Ankyrin repeat family p 100.0 2.8E-31 9.5E-36 280.4 25.4 190 1166-1380 3-201 (201)
47 2pnn_A Transient receptor pote 100.0 1.3E-32 4.3E-37 306.2 13.4 212 1161-1386 6-263 (273)
48 2etb_A Transient receptor pote 100.0 1.5E-32 5.3E-37 302.3 12.2 202 1168-1383 2-247 (256)
49 4gpm_A Engineered protein OR26 100.0 5.6E-31 1.9E-35 264.6 21.2 156 1171-1351 7-163 (169)
50 2pnn_A Transient receptor pote 100.0 7.7E-32 2.6E-36 299.8 13.9 228 1125-1362 3-272 (273)
51 3hra_A Ankyrin repeat family p 100.0 3.1E-30 1.1E-34 272.4 25.3 190 1133-1347 3-201 (201)
52 2etb_A Transient receptor pote 100.0 9.2E-31 3.1E-35 288.1 14.8 205 1134-1350 1-247 (256)
53 3jxi_A Vanilloid receptor-rela 100.0 5.5E-31 1.9E-35 290.9 12.4 204 1167-1384 4-252 (260)
54 2aja_A Ankyrin repeat family p 100.0 1.9E-32 6.5E-37 312.2 -8.8 299 1000-1378 44-370 (376)
55 4hbd_A KN motif and ankyrin re 100.0 2.2E-29 7.4E-34 278.7 15.3 188 1168-1380 76-273 (276)
56 3jxi_A Vanilloid receptor-rela 100.0 1.7E-29 5.9E-34 278.8 13.3 181 1087-1286 44-253 (260)
57 2rfm_A Putative ankyrin repeat 100.0 3.1E-28 1.1E-32 254.3 17.4 162 1194-1380 28-190 (192)
58 4hbd_A KN motif and ankyrin re 100.0 2.6E-28 8.8E-33 270.1 14.4 188 1135-1347 76-273 (276)
59 1ihb_A P18-INK4C(INK6), cyclin 100.0 1.1E-27 3.9E-32 242.4 17.6 157 1200-1382 4-162 (162)
60 2vge_A RELA-associated inhibit 99.9 2.7E-30 9.3E-35 276.0 -3.0 197 1151-1375 1-206 (229)
61 3v31_A Ankyrin repeat family A 99.9 1.6E-27 5.3E-32 242.6 17.4 160 1200-1384 2-162 (167)
62 2y1l_E Darpin-8.4; hydrolase-i 99.9 3.4E-27 1.2E-31 240.2 19.7 158 1198-1380 11-169 (169)
63 3v30_A DNA-binding protein rfx 99.9 1.9E-27 6.5E-32 243.3 16.9 162 1201-1387 2-165 (172)
64 3v30_A DNA-binding protein rfx 99.9 2E-27 7E-32 243.1 16.1 166 1170-1360 4-171 (172)
65 2aja_A Ankyrin repeat family p 99.9 6.2E-30 2.1E-34 291.4 -3.2 194 148-368 67-270 (376)
66 2rfm_A Putative ankyrin repeat 99.9 3.9E-27 1.3E-31 245.9 18.0 160 1129-1312 29-189 (192)
67 3f6q_A Integrin-linked protein 99.9 3.8E-27 1.3E-31 242.6 17.5 164 1199-1387 3-168 (179)
68 1ihb_A P18-INK4C(INK6), cyclin 99.9 8.2E-27 2.8E-31 236.1 18.0 156 1168-1349 5-162 (162)
69 1awc_B Protein (GA binding pro 99.9 1.4E-26 4.9E-31 231.2 17.9 150 1201-1376 2-152 (153)
70 3twr_A Tankyrase-2; ankyrin re 99.9 6.8E-27 2.3E-31 237.3 14.8 159 1197-1381 4-164 (165)
71 2y1l_E Darpin-8.4; hydrolase-i 99.9 3.1E-26 1E-30 233.1 19.4 154 1135-1312 14-168 (169)
72 3v31_A Ankyrin repeat family A 99.9 1.9E-26 6.6E-31 234.5 17.7 157 1168-1349 3-160 (167)
73 2vge_A RELA-associated inhibit 99.9 3.1E-29 1.1E-33 267.8 -3.7 197 1119-1343 2-207 (229)
74 3f6q_A Integrin-linked protein 99.9 5.5E-26 1.9E-30 233.9 17.6 162 1168-1354 5-168 (179)
75 1bd8_A P19INK4D CDK4/6 inhibit 99.9 8.2E-26 2.8E-30 226.9 17.8 152 1201-1379 2-155 (156)
76 1ycs_B 53BP2, P53BP2; ankyrin 99.9 6.7E-27 2.3E-31 253.1 8.3 163 1199-1387 3-169 (239)
77 1ycs_B 53BP2, P53BP2; ankyrin 99.9 5.4E-27 1.9E-31 253.8 7.0 178 1133-1335 3-192 (239)
78 3twr_A Tankyrase-2; ankyrin re 99.9 1.4E-25 4.8E-30 227.6 15.5 156 1167-1348 7-164 (165)
79 1bd8_A P19INK4D CDK4/6 inhibit 99.9 8.8E-25 3E-29 219.4 17.4 150 1169-1345 3-154 (156)
80 1awc_B Protein (GA binding pro 99.9 1.8E-24 6E-29 216.0 18.8 151 187-338 2-152 (153)
81 1d9s_A Cyclin-dependent kinase 99.9 6.2E-25 2.1E-29 213.9 14.1 129 1253-1382 7-136 (136)
82 3t8k_A Uncharacterized protein 99.9 9.7E-26 3.3E-30 230.8 7.6 160 1201-1387 6-184 (186)
83 1bi7_B P16INK4A, MTS1, multipl 99.9 2.5E-24 8.5E-29 215.4 11.6 133 1254-1388 8-142 (156)
84 1d9s_A Cyclin-dependent kinase 99.9 5.5E-24 1.9E-28 207.1 13.1 134 1125-1283 2-136 (136)
85 1bi7_B P16INK4A, MTS1, multipl 99.9 4.9E-24 1.7E-28 213.3 12.5 144 1195-1364 6-151 (156)
86 3t8k_A Uncharacterized protein 99.9 4.5E-24 1.5E-28 218.4 9.2 164 1135-1352 6-182 (186)
87 1n0r_A 4ANK, 4 ankyrin repeats 99.9 8.8E-23 3E-27 196.5 16.2 125 1257-1382 1-126 (126)
88 2jab_A H10-2-G3; HER2, darpin, 99.9 4.2E-23 1.4E-27 200.9 14.1 126 1254-1380 10-136 (136)
89 3c5r_A BARD-1, BRCA1-associate 99.9 7E-23 2.4E-27 199.9 9.4 129 1254-1383 6-135 (137)
90 2jab_A H10-2-G3; HER2, darpin, 99.9 6.4E-22 2.2E-26 192.5 14.5 127 1131-1281 10-136 (136)
91 1n0r_A 4ANK, 4 ankyrin repeats 99.9 2E-21 6.8E-26 186.9 16.4 126 1134-1283 1-126 (126)
92 3deo_A Signal recognition part 99.9 6.6E-23 2.2E-27 211.3 6.1 62 1166-1228 42-103 (183)
93 3c5r_A BARD-1, BRCA1-associate 99.9 3.1E-22 1.1E-26 195.3 9.6 134 1125-1283 1-134 (137)
94 3ui2_A Signal recognition part 99.9 5.5E-23 1.9E-27 222.5 3.5 167 1135-1347 15-183 (244)
95 3ui2_A Signal recognition part 99.8 1.7E-21 5.8E-26 210.8 12.0 142 1133-1315 43-185 (244)
96 3deo_A Signal recognition part 99.8 2.5E-21 8.4E-26 199.5 12.4 140 1132-1312 41-181 (183)
97 3aaa_C Myotrophin, protein V-1 99.8 2E-21 6.9E-26 185.2 10.5 117 1255-1372 4-121 (123)
98 3ehr_A Osteoclast-stimulating 99.8 9.3E-22 3.2E-26 210.4 9.1 133 1254-1387 69-203 (222)
99 1dcq_A PYK2-associated protein 99.8 1.9E-20 6.4E-25 205.8 18.4 127 1258-1385 130-266 (278)
100 2b0o_E UPLC1; arfgap, structur 99.8 5.3E-21 1.8E-25 212.7 12.1 140 1135-1303 151-299 (301)
101 1n0q_A 3ANK, 3 ankyrin repeats 99.8 3.6E-20 1.2E-24 166.0 12.5 93 1289-1382 1-93 (93)
102 3aaa_C Myotrophin, protein V-1 99.8 1.9E-20 6.6E-25 178.4 10.9 118 1132-1273 4-121 (123)
103 2b0o_E UPLC1; arfgap, structur 99.8 1.6E-20 5.3E-25 208.9 11.7 109 1255-1370 187-299 (301)
104 1dcq_A PYK2-associated protein 99.8 1.6E-19 5.4E-24 198.5 17.6 124 1136-1283 131-263 (278)
105 3ehr_A Osteoclast-stimulating 99.8 5.1E-20 1.8E-24 196.8 9.5 131 1132-1286 70-201 (222)
106 3lvq_E ARF-GAP with SH3 domain 99.8 2.5E-19 8.6E-24 215.7 15.4 127 1259-1386 133-269 (497)
107 3jue_A Arfgap with coiled-coil 99.8 3.1E-19 1.1E-23 202.3 13.3 128 1256-1384 233-366 (368)
108 3jue_A Arfgap with coiled-coil 99.8 4.8E-19 1.7E-23 200.7 14.1 125 1134-1282 198-325 (368)
109 1n0q_A 3ANK, 3 ankyrin repeats 99.8 1.1E-18 3.7E-23 156.3 12.5 93 1134-1226 1-93 (93)
110 3lvq_E ARF-GAP with SH3 domain 99.8 1E-18 3.6E-23 210.3 15.1 135 1136-1299 133-276 (497)
111 2l6b_A NR1C; ankyrin, consensu 99.7 8.2E-19 2.8E-23 164.8 7.0 107 1254-1361 5-112 (115)
112 2l6b_A NR1C; ankyrin, consensu 99.7 1.6E-18 5.4E-23 162.8 8.6 100 1287-1387 6-105 (115)
113 2zgd_A 3 repeat synthetic anky 99.7 1.5E-16 5.2E-21 147.2 10.6 91 1285-1376 19-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.6 1.2E-15 4.2E-20 141.1 10.5 92 1129-1220 18-109 (110)
115 4g26_A Pentatricopeptide repea 21.5 1.9E+02 0.0064 33.6 8.4 143 454-604 32-199 (501)
No 1
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.4e-61 Score=581.86 Aligned_cols=397 Identities=37% Similarity=0.564 Sum_probs=329.7
Q ss_pred CCCCCccCCCCCCChhhHHHhcChHHHHHHHHhCCCCCCccccccccchhhcccccccchhhhHhhhhcccCcccccccc
Q psy13737 902 HGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASSHVVSCYSNVKVHVSLNKIQDVSSSILRLATCDVLPQCETRLN 981 (1388)
Q Consensus 902 ~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 981 (1388)
.|++++..+..|.||||+|+..|+.++|++|+++|+++
T Consensus 3 ~g~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~------------------------------------------ 40 (437)
T 1n11_A 3 PGISGGGGGESGLTPLHVASFMGHLPIVKNLLQRGASP------------------------------------------ 40 (437)
T ss_dssp ------------CCHHHHHHHHTCHHHHHHHHHTTCCS------------------------------------------
T ss_pred CCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC------------------------------------------
Confidence 46777777777777777777777777777777777765
Q ss_pred ccccccCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHCCCCCCccCCCCchHHh
Q psy13737 982 FSNLRVREQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLH 1061 (1388)
Q Consensus 982 ~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~tpL~ 1061 (1388)
+..+..|.||||+|+..|+.+++++|+++|++++.++.+|+||||+|+..|+.+++++|+++|++++..+..|.||||
T Consensus 41 --~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~ 118 (437)
T 1n11_A 41 --NVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLH 118 (437)
T ss_dssp --CCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHH
T ss_pred --CCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCcHHH
Confidence 334456778888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred HHHhcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHhhcCcHHHHHHHHHcCCChHHHHHHHhcCCCCCCCCCCCCcHHHH
Q psy13737 1062 LTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHL 1141 (1388)
Q Consensus 1062 ~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~l~~~g~~~~~~~~~g~t~L~~ 1141 (1388)
+|+..|+.+++++|++.+++++..+..|.||||+|+..++.+++++|+ +.|++++..+..|.||||+
T Consensus 119 ~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll-------------~~g~~~~~~~~~g~t~L~~ 185 (437)
T 1n11_A 119 IAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLL-------------ERDAHPNAAGKNGLTPLHV 185 (437)
T ss_dssp HHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHH-------------HTTCCTTCCCSSCCCHHHH
T ss_pred HHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHH-------------hCCCCCCCCCCCCCCHHHH
Confidence 888888888888888888888778888888888888777766655554 3466777888888899999
Q ss_pred HHhcCCHHHHHHHHhCCCCccccccCCCcHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHH
Q psy13737 1142 SASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLL 1221 (1388)
Q Consensus 1142 A~~~~~~~~v~~Ll~~g~d~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll 1221 (1388)
|+..|+.+++++|+++|++++..+..|.||||+|+..++.+++++|++.|++++.++..|+||||+|+..|+.+++++|+
T Consensus 186 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll 265 (437)
T 1n11_A 186 AVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLL 265 (437)
T ss_dssp HHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHH
Confidence 99999999999999999999988889999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCCcccCCCCCCCCcchhhhccccccccccCCCCCCChHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCcHHHHHHhc
Q psy13737 1222 DQSANVTVPKNFPSRPIGILFILFPFIIGYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNA-TNKGFTPLHHSAQQ 1300 (1388)
Q Consensus 1222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~-~~~g~tpL~~A~~~ 1300 (1388)
+++++++. .+..|+||||+|+..|+.+++++|+++|++++. +..|+||||+|+..
T Consensus 266 ~~~~~~~~------------------------~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 321 (437)
T 1n11_A 266 SKQANGNL------------------------GNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHY 321 (437)
T ss_dssp TTTCCTTC------------------------CCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHS
T ss_pred hcCCCCCC------------------------CCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHc
Confidence 99988765 667899999999999999999999999999987 55799999999999
Q ss_pred CcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHHCC
Q psy13737 1301 GHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRG 1380 (1388)
Q Consensus 1301 g~~~iv~~Ll~~g~~~~~~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~ga~~~~~d~~G~tpL~~A~~~g~~~~v~~Ll~~g 1380 (1388)
|+.++|++|+++|++++.++. .|+||||+|+..|+.++|++|+++|++++.+|.+|+|||++|++.|+.+++++|....
T Consensus 322 g~~~~v~~Ll~~gad~n~~~~-~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~ 400 (437)
T 1n11_A 322 GNIKLVKFLLQHQADVNAKTK-LGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVT 400 (437)
T ss_dssp SCSHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCCHHHHHHHTTCHHHHHHHHHHC
T ss_pred CcHHHHHHHHhcCCCCCCCCC-CCCCHHHHHHHCChHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcc
Confidence 999999999999999998775 6999999999999999999999999999999999999999999999999999987543
No 2
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=3.3e-60 Score=570.02 Aligned_cols=395 Identities=41% Similarity=0.630 Sum_probs=267.1
Q ss_pred cCCCcccccCCCCChhhHHHhcCcHHHHHHHHhCCCCCccCCCCCCChhhHHHhcChHHHHHHHHhCCCCCCcccccccc
Q psy13737 869 HGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASSHVVSCYSNV 948 (1388)
Q Consensus 869 ~ga~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~ 948 (1388)
.|++++..+..|.||||+|+..|+.++|++|+++|++++..+..+.||||+|+..|+.+++++|+++|+++
T Consensus 3 ~g~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~--------- 73 (437)
T 1n11_A 3 PGISGGGGGESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKV--------- 73 (437)
T ss_dssp ------------CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCS---------
T ss_pred CCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC---------
Confidence 45566666666666666666666666666666666666666666666666666666666666666666554
Q ss_pred chhhcccccccchhhhHhhhhcccCccccccccccccccCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHH
Q psy13737 949 KVHVSLNKIQDVSSSILRLATCDVLPQCETRLNFSNLRVREQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALH 1028 (1388)
Q Consensus 949 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 1028 (1388)
+..+..|.||||+|++.|+.+++++|+++|++++..+..|.||||
T Consensus 74 -----------------------------------~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~ 118 (437)
T 1n11_A 74 -----------------------------------NAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLH 118 (437)
T ss_dssp -----------------------------------SCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHH
T ss_pred -----------------------------------CCCCCCCCCHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCcHHH
Confidence 333445666666666666666666666666666666666666666
Q ss_pred HHHHhChHHHHHHHHHCCCCCCccCCCCchHHhHHHhcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHhhcCcHHHHHHH
Q psy13737 1029 IAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLL 1108 (1388)
Q Consensus 1029 ~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~tpL~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~l 1108 (1388)
+|+..|+.+++++|++.+++.+..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++.+++++|
T Consensus 119 ~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 198 (437)
T 1n11_A 119 IAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLL 198 (437)
T ss_dssp HHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSCCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 66666666666666666666666666666677777666666666766666666666666667777776666655544443
Q ss_pred HHcCCChHHHHHHHhcCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCccccccCCCcHHHHHHhcCcHHHHHHHH
Q psy13737 1109 LEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLL 1188 (1388)
Q Consensus 1109 l~~~~~~~~~~~l~~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll 1188 (1388)
+ +.|++++..+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|+
T Consensus 199 l-------------~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll 265 (437)
T 1n11_A 199 L-------------PRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLL 265 (437)
T ss_dssp G-------------GGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred H-------------hCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHH
Confidence 3 344555666666777777777777777777777777777777777777777777777777777777
Q ss_pred hCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCcccCCCCCCCCcchhhhccccccccccCCCCCCChHHHHHHc
Q psy13737 1189 KNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRPIGILFILFPFIIGYTNTTDQGFTPLHHSAQQ 1268 (1388)
Q Consensus 1189 ~~g~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~ 1268 (1388)
++|++++..+..|+||||+|+..|+.+++++|+++|++++. .+..|+||||+|+..
T Consensus 266 ~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~------------------------~~~~g~t~L~~A~~~ 321 (437)
T 1n11_A 266 SKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDA------------------------TTRMGYTPLHVASHY 321 (437)
T ss_dssp TTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTC------------------------CCSSCCCHHHHHHHS
T ss_pred hcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCC------------------------CCCCCCCHHHHHHHc
Confidence 77777777777777777777777777777777777776654 556677777777777
Q ss_pred CCHHHHHHHHHcCCCCCC-CCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHh
Q psy13737 1269 GHSTIVALLLDRGASPNA-TNKGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLD 1345 (1388)
Q Consensus 1269 g~~~~v~~Ll~~g~~~~~-~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~T~Lh~A~~~~~~~~v~~Ll~ 1345 (1388)
|+.++|++|+++|++++. +..|+||||+|+..|+.++|++|+++|++++..+. +|+|||++|+..|+.+++++|..
T Consensus 322 g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~-~g~t~l~~A~~~g~~~~~~~l~~ 398 (437)
T 1n11_A 322 GNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSS-DGTTPLAIAKRLGYISVTDVLKV 398 (437)
T ss_dssp SCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCS-SSCCHHHHHHHTTCHHHHHHHHH
T ss_pred CcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCCCCC-CCCCHHHHHHHcCcHHHHHHHHh
Confidence 777777777777777776 44577777777777777777777777777776654 57777777777777777777754
No 3
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=1.8e-44 Score=416.01 Aligned_cols=299 Identities=28% Similarity=0.370 Sum_probs=225.1
Q ss_pred CCCcHHHHHHHhChHHHHHHHHHCCCCCCccCC-CCchHHhHHHhcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHhhcC
Q psy13737 1022 DLYTALHIAAKEGQEEVAAVLLENGASLTSTTK-KGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYD 1100 (1388)
Q Consensus 1022 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~g~tpL~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~L~~A~~~~ 1100 (1388)
+|.||||.|++.|+.++|++|+++|++++.++. .|+||||+|+..|+.+++++|+++|++++.++..+.+|++.++..+
T Consensus 24 ~~~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~ 103 (337)
T 4g8k_A 24 EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAG 103 (337)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred CCChHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcc
Confidence 456777777777777777777777777766654 3677777777777777777777777766666666666666665554
Q ss_pred cHHHHHHHHHcCCChHHHHHHHhcCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCccccccCCCcHHHHHHhcCc
Q psy13737 1101 HQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDR 1180 (1388)
Q Consensus 1101 ~~~~~~~ll~~~~~~~~~~~l~~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~~~~~~~g~t~Lh~A~~~~~ 1180 (1388)
....... +++.+++++..+..|.||||+|+..|+.+++++|+++|++++..+..+.
T Consensus 104 ~~~~~~~-------------~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~----------- 159 (337)
T 4g8k_A 104 SVKLLKL-------------FLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKE----------- 159 (337)
T ss_dssp CHHHHHH-------------HHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC------------
T ss_pred cchhhHH-------------hhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhcccc-----------
Confidence 4443332 2333445555555666666666666666666666666655554432221
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHh-CCCCcccCCCCCCCCcchhhhccccccccccCCCCCC
Q psy13737 1181 VGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLD-QSANVTVPKNFPSRPIGILFILFPFIIGYTNTTDQGF 1259 (1388)
Q Consensus 1181 ~~~~~~Ll~~g~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 1259 (1388)
+.+..+..|+||||+|+..|+.++|++|++ .|++++. .+..|+
T Consensus 160 ------------~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~------------------------~d~~g~ 203 (337)
T 4g8k_A 160 ------------DQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNA------------------------CDNMGR 203 (337)
T ss_dssp ----------------CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTC------------------------CCTTSC
T ss_pred ------------ccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCc------------------------cCCCCC
Confidence 223456679999999999999999999996 5888875 678899
Q ss_pred ChHHHHHHcCC----HHHHHHHHHcCCCCCC-CCCCCcHHHHHHhcCcHHHHHHHHHc-CCCCCCCCCCCCCcHHHHHHH
Q psy13737 1260 TPLHHSAQQGH----STIVALLLDRGASPNA-TNKGFTPLHHSAQQGHSTIVALLLDR-GASPNATNKTRGFTPLHIACH 1333 (1388)
Q Consensus 1260 t~L~~Aa~~g~----~~~v~~Ll~~g~~~~~-~~~g~tpL~~A~~~g~~~iv~~Ll~~-g~~~~~~~~~~g~T~Lh~A~~ 1333 (1388)
||||.++..+. ..++++|+++|++++. +..|+||||+|+..|+.++|+.|++. |++++.++. +|+||||+|+.
T Consensus 204 t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~-~G~TpL~~A~~ 282 (337)
T 4g8k_A 204 NALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDS-DGKTALLLAVE 282 (337)
T ss_dssp CHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCT-TSCBHHHHHHH
T ss_pred cHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCC-CCCCHHHHHHH
Confidence 99999886543 4688999999999997 56799999999999999999999985 899998875 79999999999
Q ss_pred cCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHHCCCCCCCC
Q psy13737 1334 YGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNAT 1386 (1388)
Q Consensus 1334 ~~~~~~v~~Ll~~ga~~~~~d~~G~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~ 1386 (1388)
.|+.++|++|+++||+++. .||||+|+++|+.++|++||++||+||..
T Consensus 283 ~g~~~iv~~Ll~~GAd~n~-----~~~L~~A~~~~~~~iv~~Ll~~GA~~d~~ 330 (337)
T 4g8k_A 283 LKLKKIAELLCKRGASTDC-----GDLVMTARRNYDHSLVKVLLSHGAKEDFH 330 (337)
T ss_dssp TTCHHHHHHHHTTSCSSTT-----CCHHHHHHHTTCHHHHHHHHHTTCCC---
T ss_pred cCCHHHHHHHHHCCCCCCC-----CCHHHHHHHcCCHHHHHHHHHCcCCCCCC
Confidence 9999999999999999875 46999999999999999999999999864
No 4
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=6.1e-45 Score=419.89 Aligned_cols=302 Identities=27% Similarity=0.365 Sum_probs=234.4
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCC-CCCcHHHHHHHhChHHHHHHHHHCCCCCCccCCCCchHHhHHHhc
Q psy13737 988 REQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTK-DLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKY 1066 (1388)
Q Consensus 988 ~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~tpL~~A~~~ 1066 (1388)
.+|.|+||.|++.|+.++|++|+++|+++|.++. .|+||||+|+..|+.+++++|+++|++++.++..+.+|++.++..
T Consensus 23 ~~~~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~ 102 (337)
T 4g8k_A 23 VEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIA 102 (337)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred CCCChHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhc
Confidence 3578999999999999999999999999998876 499999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHhCCCCCCCCCCCCCcHHHHHhhcCcHHHHHHHHHcCCChHHHHHHHhcCCCCCCCCCCCCcHHHHHHhcC
Q psy13737 1067 GHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEG 1146 (1388)
Q Consensus 1067 ~~~~~~~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~l~~~g~~~~~~~~~g~t~L~~A~~~~ 1146 (1388)
+...++..+++.+++++.+|..|+||||+|+..++.++++++++.|+++++. .....+++..+..|.||||+|+..|
T Consensus 103 ~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~---~~~~~~~~~~~~~g~T~L~~A~~~g 179 (337)
T 4g8k_A 103 GSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLR---RKTKEDQERLRKGGATALMDAAEKG 179 (337)
T ss_dssp TCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCC---CCCC-----CTTCSCCHHHHHHHHT
T ss_pred ccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchh---hccccccccccCCCCcHHHHHHHCC
Confidence 9999999999999999999999999999999999999888888776654311 0112223344566778888888888
Q ss_pred CHHHHHHHHh-CCCCccccccCCCcHHHHHHhcCc----HHHHHHHHhCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHH
Q psy13737 1147 HADMSAMLLE-HGADVSHAAKNGLTPLHLCAQEDR----VGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLL 1221 (1388)
Q Consensus 1147 ~~~~v~~Ll~-~g~d~~~~~~~g~t~Lh~A~~~~~----~~~~~~Ll~~g~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll 1221 (1388)
+.+++++|++ .|++++.+|..|.||||.++..+. ..++++|+++|++++.+|..|+||||+|+..|+.++++.|+
T Consensus 180 ~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll 259 (337)
T 4g8k_A 180 HVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLL 259 (337)
T ss_dssp CHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHH
T ss_pred CHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHH
Confidence 8888887774 477777777777787777665432 35677777777777777777777777777777777777777
Q ss_pred hC-CCCcccCCCCCCCCcchhhhccccccccccCCCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcHHHHHHhc
Q psy13737 1222 DQ-SANVTVPKNFPSRPIGILFILFPFIIGYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATNKGFTPLHHSAQQ 1300 (1388)
Q Consensus 1222 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~g~tpL~~A~~~ 1300 (1388)
+. |++++. +|.+|+||||+|++.|+.++|++|+++|++++. .||||+|+..
T Consensus 260 ~~~~~~vn~------------------------~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~----~~~L~~A~~~ 311 (337)
T 4g8k_A 260 EQEHIEIND------------------------TDSDGKTALLLAVELKLKKIAELLCKRGASTDC----GDLVMTARRN 311 (337)
T ss_dssp TSTTCCTTC------------------------BCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTT----CCHHHHHHHT
T ss_pred HhcCCcccC------------------------cCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC----CCHHHHHHHc
Confidence 64 555554 566677777777777777777777777776653 3577777777
Q ss_pred CcHHHHHHHHHcCCCCCCCC
Q psy13737 1301 GHSTIVALLLDRGASPNATN 1320 (1388)
Q Consensus 1301 g~~~iv~~Ll~~g~~~~~~~ 1320 (1388)
|+.++|++||++||++|...
T Consensus 312 ~~~~iv~~Ll~~GA~~d~~~ 331 (337)
T 4g8k_A 312 YDHSLVKVLLSHGAKEDFHP 331 (337)
T ss_dssp TCHHHHHHHHHTTCCC----
T ss_pred CCHHHHHHHHHCcCCCCCCC
Confidence 77777777777777666543
No 5
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.9e-41 Score=382.04 Aligned_cols=273 Identities=32% Similarity=0.447 Sum_probs=246.7
Q ss_pred CCCcHHHHHhhcCcHHHHHHHHHcCCChHHHHHHHhcCCCCCCC-CCCCCcHHHHHHhcCCHHHHHHHHhCCCCcccccc
Q psy13737 1088 NGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAE-SVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAK 1166 (1388)
Q Consensus 1088 ~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~l~~~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~~~~~~ 1166 (1388)
+|.||||.|+..|+.+++++|++. |++++.. +..|.||||+|+..|+.+++++|+++|++++..+.
T Consensus 4 ~g~~~L~~A~~~g~~~~v~~Ll~~-------------g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~ 70 (285)
T 1wdy_A 4 EDNHLLIKAVQNEDVDLVQQLLEG-------------GANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKK 70 (285)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHT-------------TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred ccchHHHHHHHcCCHHHHHHHHHc-------------CCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCC
Confidence 577888888888877776666554 5666766 78899999999999999999999999999999999
Q ss_pred CCCcHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCcccCCCCCCCCcchhhhccc
Q psy13737 1167 NGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRPIGILFILFP 1246 (1388)
Q Consensus 1167 ~g~t~Lh~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~ 1246 (1388)
.|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.....+.
T Consensus 71 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~----------- 139 (285)
T 1wdy_A 71 NGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKE----------- 139 (285)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCH-----------
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHH-----------
Confidence 999999999999999999999999999999999999999999999999999999999998875322110
Q ss_pred cccccccCCCCCCChHHHHHHcCCHHHHHHHHHc-CCCCCC-CCCCCcHHHHHHhcCc----HHHHHHHHHcCCCCCCCC
Q psy13737 1247 FIIGYTNTTDQGFTPLHHSAQQGHSTIVALLLDR-GASPNA-TNKGFTPLHHSAQQGH----STIVALLLDRGASPNATN 1320 (1388)
Q Consensus 1247 ~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~-g~~~~~-~~~g~tpL~~A~~~g~----~~iv~~Ll~~g~~~~~~~ 1320 (1388)
.....+..|.||||+|+..|+.+++++|++. |++++. +..|+||||+|+..++ .+++++|+++|++++..+
T Consensus 140 ---~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~ 216 (285)
T 1wdy_A 140 ---DQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRG 216 (285)
T ss_dssp ---HHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCC
T ss_pred ---HHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcC
Confidence 0111367899999999999999999999997 999987 5679999999999999 999999999999999877
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHHCCCCCCCCCC
Q psy13737 1321 KTRGFTPLHIACHYGQISMARLLLD-QSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATNK 1388 (1388)
Q Consensus 1321 ~~~g~T~Lh~A~~~~~~~~v~~Ll~-~ga~~~~~d~~G~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~ 1388 (1388)
. .|+||||+|+..|+.+++++|++ .|++++.+|..|+||||+|++.|+.++|++|+++||+|+.+|.
T Consensus 217 ~-~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~~~~d~ 284 (285)
T 1wdy_A 217 E-RGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGDL 284 (285)
T ss_dssp T-TSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCCSSC
T ss_pred C-CCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcccc
Confidence 5 79999999999999999999999 8999999999999999999999999999999999999999874
No 6
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=9e-42 Score=397.88 Aligned_cols=294 Identities=28% Similarity=0.365 Sum_probs=136.3
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHCCCCCCccCCCCchHHhHHHhcC
Q psy13737 988 REQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYG 1067 (1388)
Q Consensus 988 ~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~tpL~~A~~~~ 1067 (1388)
..|.||||+|+..|+.+++++|+++|++++..+..|+||||+|+..|+.+++++|+++|++++..+..|+||||+|+..|
T Consensus 56 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 135 (351)
T 3utm_A 56 GRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKN 135 (351)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcC
Confidence 34555555555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred cHHHHHHHHhCCCCCCCCCCCCCcHHHHHhhcCcHHHHHHHHHcCCChHHHHHHHhcCCCCCCCCCCCCcHHHHHHhcCC
Q psy13737 1068 HIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGH 1147 (1388)
Q Consensus 1068 ~~~~~~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~l~~~g~~~~~~~~~g~t~L~~A~~~~~ 1147 (1388)
+.+++++|++.|++++..+..|.||+++|+..+..+....... .++++.++..++
T Consensus 136 ~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~ 190 (351)
T 3utm_A 136 RVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFK-------------------------GHSLLQAAREAD 190 (351)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHH-------------------------HHHHHHHHHTTC
T ss_pred CHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhc-------------------------ccHHHHHHHhcc
Confidence 5555555555555555555555555555544333332222111 123444444444
Q ss_pred HHHHHHHHhCCCCccccccCCCcHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCc
Q psy13737 1148 ADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANV 1227 (1388)
Q Consensus 1148 ~~~v~~Ll~~g~d~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~ 1227 (1388)
.+.+..++..+......+..|.||||+|+..++. +..+++++|++.|+++
T Consensus 191 ~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~------------------------------~~~~~~~~Ll~~g~~~ 240 (351)
T 3utm_A 191 LAKVKKTLALEIINFKQPQSHETALHCAVASLHP------------------------------KRKQVAELLLRKGANV 240 (351)
T ss_dssp HHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCST------------------------------THHHHHHHHHHTTCCT
T ss_pred HHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCc------------------------------cHHHHHHHHHHcCCCc
Confidence 4444444444433333344444444444444110 2344455555554444
Q ss_pred ccCCCCCCCCcchhhhccccccccccCCCCCCChHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCcHHHHHHhcCcHHHH
Q psy13737 1228 TVPKNFPSRPIGILFILFPFIIGYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNA-TNKGFTPLHHSAQQGHSTIV 1306 (1388)
Q Consensus 1228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~-~~~g~tpL~~A~~~g~~~iv 1306 (1388)
+. .+..|+||||+|+..|+.++|++|+++|++++. +..|+||||+|+..|+.++|
T Consensus 241 ~~------------------------~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~~v 296 (351)
T 3utm_A 241 NE------------------------KNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTC 296 (351)
T ss_dssp TC------------------------CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHH
T ss_pred CC------------------------cCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHH
Confidence 32 334455555555555555555555555555553 33455555555555555555
Q ss_pred HHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHhC
Q psy13737 1307 ALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQG 1368 (1388)
Q Consensus 1307 ~~Ll~~g~~~~~~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~ga~~~~~d~~G~tpL~~A~~~g 1368 (1388)
++|+++|++++..+. .|+||||+| ..+++++|.+.+.. ...++.++|..|+++|
T Consensus 297 ~~Ll~~gad~~~~~~-~g~tal~~a----~~~~~~~l~~~~~~---~~~~~~~~l~~A~~~g 350 (351)
T 3utm_A 297 RLLLSYGSDPSIISL-QGFTAAQMG----NEAVQQILSESTPM---RTSDVDYRLLEASKAG 350 (351)
T ss_dssp HHHHHTTCCTTCCCT-TSCCHHHHS----CHHHHHHHHHC----------------------
T ss_pred HHHHHcCCCCCCcCC-CCCChhhhh----hHHHHHHHHhcccc---ccCcceeehhhhhccC
Confidence 555555555555443 455555554 34455555554332 2334555555555554
No 7
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=5e-41 Score=391.56 Aligned_cols=308 Identities=28% Similarity=0.382 Sum_probs=244.1
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHCCCCCCccCCCCchHHhHHHhc
Q psy13737 988 REQQTPLHIASRLGNVDIVMLLLQH-GAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKY 1066 (1388)
Q Consensus 988 ~~~~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~tpL~~A~~~ 1066 (1388)
..+.|+||.|++.|+.+.++.|+.. +.+++..+..|.||||+|+..|+.+++++|++.|++++.++..|+||||+|+..
T Consensus 22 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 101 (351)
T 3utm_A 22 EYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSY 101 (351)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred cccchhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHC
Confidence 3456777777777777777666653 666666777777777777777777777777777777776666777777777777
Q ss_pred CcHHHHHHHHhCCCCCCCCCCCCCcHHHHHhhcCcHHHHHHHHHcCCChHHHHHHHhcCCCCCCCCCCCCcHHHHHHhcC
Q psy13737 1067 GHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEG 1146 (1388)
Q Consensus 1067 ~~~~~~~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~l~~~g~~~~~~~~~g~t~L~~A~~~~ 1146 (1388)
|+.+++++|++.|++++. .+..|.||||+|+..|
T Consensus 102 g~~~iv~~Ll~~g~~~~~----------------------------------------------~~~~g~t~L~~A~~~~ 135 (351)
T 3utm_A 102 GHYEVTELLLKHGACVNA----------------------------------------------MDLWQFTPLHEAASKN 135 (351)
T ss_dssp TCHHHHHHHHHTTCCTTC----------------------------------------------CCTTCCCHHHHHHHTT
T ss_pred CCHHHHHHHHHCCCCCCC----------------------------------------------CCCCCCCHHHHHHHcC
Confidence 777776666666655544 4445666677777777
Q ss_pred CHHHHHHHHhCCCCccccccCCCcHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhCCCC
Q psy13737 1147 HADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSAN 1226 (1388)
Q Consensus 1147 ~~~~v~~Ll~~g~d~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ 1226 (1388)
+.+++++|+++|++++..+..|.||+++|+..+..+.+.+... .+++..++..++.+.++.++..+..
T Consensus 136 ~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~l~~~~~ 203 (351)
T 3utm_A 136 RVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFK------------GHSLLQAAREADLAKVKKTLALEII 203 (351)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHH------------HHHHHHHHHTTCHHHHHHHTTTCCT
T ss_pred CHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhc------------ccHHHHHHHhccHHHHHHHHHhhcc
Confidence 7888888888888888888888888888887777777776654 2578888889999988888877653
Q ss_pred cccCCCCCCCCcchhhhccccccccccCCCCCCChHHHHHHc---CCHHHHHHHHHcCCCCCC-CCCCCcHHHHHHhcCc
Q psy13737 1227 VTVPKNFPSRPIGILFILFPFIIGYTNTTDQGFTPLHHSAQQ---GHSTIVALLLDRGASPNA-TNKGFTPLHHSAQQGH 1302 (1388)
Q Consensus 1227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~---g~~~~v~~Ll~~g~~~~~-~~~g~tpL~~A~~~g~ 1302 (1388)
... .+..|.||||+|+.. +..+++++|++.|++++. +..|+||||+|+..|+
T Consensus 204 ~~~------------------------~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~ 259 (351)
T 3utm_A 204 NFK------------------------QPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAH 259 (351)
T ss_dssp TCC------------------------CTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred ccc------------------------CCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCC
Confidence 221 466799999999999 558999999999999987 5679999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHHCCCC
Q psy13737 1303 STIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGAS 1382 (1388)
Q Consensus 1303 ~~iv~~Ll~~g~~~~~~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~ga~~~~~d~~G~tpL~~A~~~g~~~~v~~Ll~~ga~ 1382 (1388)
.++|++|+++|++++..+. .|+||||+|+..|+.++|++|+++|++++.+|..|+||+++| +.+++++|.+.+..
T Consensus 260 ~~~v~~Ll~~ga~~n~~d~-~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~tal~~a----~~~~~~~l~~~~~~ 334 (351)
T 3utm_A 260 NDVMEVLHKHGAKMNALDS-LGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFTAAQMG----NEAVQQILSESTPM 334 (351)
T ss_dssp HHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHS----CHHHHHHHHHC---
T ss_pred HHHHHHHHHCCCCCCCcCC-CCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCChhhhh----hHHHHHHHHhcccc
Confidence 9999999999999998875 799999999999999999999999999999999999999998 57899999987654
No 8
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=3.4e-42 Score=400.77 Aligned_cols=319 Identities=21% Similarity=0.218 Sum_probs=179.9
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHCCCCCCccCCCCchHHhHHHhcCcH
Q psy13737 990 QQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHI 1069 (1388)
Q Consensus 990 ~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~tpL~~A~~~~~~ 1069 (1388)
.+.+|+.++..|+.+.++.++++...+. .-.+++.-+...|+.+++++++.. ..+..|.||||+|+..+.
T Consensus 37 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~-----~~~~~g~t~L~~Aa~~~~- 106 (373)
T 2fo1_E 37 SQHSLLEASYDGYIKRQRNELQHYSLYP----NPQGYGNGNDFLGDFNHTNLQIPT-----EPEPESPIKLHTEAAGSY- 106 (373)
T ss_dssp ------------------------------------------------------------------CCCHHHHHHHSSS-
T ss_pred cccccccccCCccccchhhhhhhhcccc----CccccCCCCCcccccccccccccc-----CCCCCCccHHHHHhcCCc-
Confidence 4556777888888888888887766553 223456667777888888877654 356788899999988554
Q ss_pred HHHHHHHhCCCCCCCCC-CCCCcHHHHHhhcCcHHHHHHHHHcCCChHHHHHHHhcCCCCCCCCCCCCcHHHHHHhcCCH
Q psy13737 1070 KVAKLLLQKDAPVDFQG-KNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHA 1148 (1388)
Q Consensus 1070 ~~~~~Ll~~~~~~~~~~-~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~l~~~g~~~~~~~~~g~t~L~~A~~~~~~ 1148 (1388)
+++++|+. .+++..| ..|+||||+|+..++.+++++|+.. .++.|++.|+++|.+|..|.||||+|+
T Consensus 107 ~~~~~L~~--~~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~-----~~~~ll~~ga~vn~~d~~g~TpL~~A~----- 174 (373)
T 2fo1_E 107 AITEPITR--ESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVH-----EAKECIAAGADVNAMDCDENTPLMLAV----- 174 (373)
T ss_dssp CCCSCCST--TTTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHH-----HHHHHHHTCCCTTCCCTTSCCHHHHHH-----
T ss_pred hHHHHhcc--ccccccCCcCCCCHHHHHHHCCCHHHHHHHHHH-----HHHHHHhcCCCCcCCCCCCCCHHHHHH-----
Confidence 67766654 4567777 6788888888877777666665532 233344444455444444445555444
Q ss_pred HHHHHHHhCCCCccccccCCCcHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhCC---C
Q psy13737 1149 DMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQS---A 1225 (1388)
Q Consensus 1149 ~~v~~Ll~~g~d~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~---~ 1225 (1388)
..|+.+++++|+++|++++.++..|+||||+|+..|+.+++++|++++ +
T Consensus 175 ----------------------------~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~ 226 (373)
T 2fo1_E 175 ----------------------------LARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKG 226 (373)
T ss_dssp ----------------------------HHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHH
T ss_pred ----------------------------HcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCcccc
Confidence 444445555555555555545555555555555555555555555443 2
Q ss_pred CcccCCCCCCCCcchhhhccccccccccCCCCCCChHHHHHHcC---CHHHHHHHHHcCCCCCC---------CCCCCcH
Q psy13737 1226 NVTVPKNFPSRPIGILFILFPFIIGYTNTTDQGFTPLHHSAQQG---HSTIVALLLDRGASPNA---------TNKGFTP 1293 (1388)
Q Consensus 1226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g---~~~~v~~Ll~~g~~~~~---------~~~g~tp 1293 (1388)
+++. .+..|.||||+|+..| +.+++++|++.|++++. +..|+||
T Consensus 227 ~~~~------------------------~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~ 282 (373)
T 2fo1_E 227 DIEE------------------------LDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTA 282 (373)
T ss_dssp TTSC------------------------CCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCT
T ss_pred Chhh------------------------cCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCH
Confidence 3322 3444555555555554 45555555555555543 4578999
Q ss_pred HHHHHhcCcHHHHHHHHHcC-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHhCcHHH
Q psy13737 1294 LHHSAQQGHSTIVALLLDRG-ASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTI 1372 (1388)
Q Consensus 1294 L~~A~~~g~~~iv~~Ll~~g-~~~~~~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~ga~~~~~d~~G~tpL~~A~~~g~~~~ 1372 (1388)
||+|+..|+.++|++|+++| ++++..+. .|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+++|+.++
T Consensus 283 Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~-~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g~~~i 361 (373)
T 2fo1_E 283 LHYAAQVSNMPIVKYLVGEKGSNKDKQDE-DGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNI 361 (373)
T ss_dssp HHHHHSSCCHHHHHHHHHHSCCCTTCCCT-TCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHH
T ss_pred HHHHHHhCCHHHHHHHHHhcCCCccCcCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHHHHcCCHHH
Confidence 99999999999999999886 88887775 79999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHCCCCC
Q psy13737 1373 VALLLDRGASP 1383 (1388)
Q Consensus 1373 v~~Ll~~ga~~ 1383 (1388)
|++|+++|++.
T Consensus 362 v~~Ll~~~a~~ 372 (373)
T 2fo1_E 362 VDIFDRCRPER 372 (373)
T ss_dssp HHHHHTTC---
T ss_pred HHHHHhcCccc
Confidence 99999999864
No 9
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.3e-39 Score=367.12 Aligned_cols=262 Identities=30% Similarity=0.403 Sum_probs=219.1
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCCCCCC-CCCCCcHHHHHHHhChHHHHHHHHHCCCCCCccCCCCchHHhHHHhcC
Q psy13737 989 EQQTPLHIASRLGNVDIVMLLLQHGAAVDST-TKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYG 1067 (1388)
Q Consensus 989 ~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~tpL~~A~~~~ 1067 (1388)
+|.||||.|++.|+.+++++|++.|++++.. +..|+||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|
T Consensus 4 ~g~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 83 (285)
T 1wdy_A 4 EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAG 83 (285)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcC
Confidence 4789999999999999999999999999988 788999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHhCCCCCCCCCCCCCcHHHHHhhcCcHHHHHHHHHcCCChHHHHHHHhcCCCCCCC----------CCCCCc
Q psy13737 1068 HIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAE----------SVAGFT 1137 (1388)
Q Consensus 1068 ~~~~~~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~l~~~g~~~~~~----------~~~g~t 1137 (1388)
+.+++++|++.|++++.+|..|+||||+|+..++.+++++|++. |++++.. +..|.|
T Consensus 84 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-------------g~~~~~~~~~~~~~~~~~~~g~t 150 (285)
T 1wdy_A 84 SVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKR-------------GANVNLRRKTKEDQERLRKGGAT 150 (285)
T ss_dssp CHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHT-------------TCCTTCCCCCCHHHHHTTCCCCC
T ss_pred CHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHh-------------CCCcccccccHHHHHhhccCCCc
Confidence 99999999999999999999999999999999988877776665 4555555 566778
Q ss_pred HHHHHHhcCCHHHHHHHHhC-CCCccccccCCCcHHHHHHhcCc----HHHHHHHHhCCCCCCCCCCCCCcHHHHHHHhC
Q psy13737 1138 PLHLSASEGHADMSAMLLEH-GADVSHAAKNGLTPLHLCAQEDR----VGVAELLLKNNAQVDTPTKKGFTPLHIACHYG 1212 (1388)
Q Consensus 1138 ~L~~A~~~~~~~~v~~Ll~~-g~d~~~~~~~g~t~Lh~A~~~~~----~~~~~~Ll~~g~~~~~~~~~g~tpL~~A~~~g 1212 (1388)
|||+|+..|+.+++++|++. |++++..+..|.||||+|+..++ .+++++|++.|++++.+|..|+||||+|+..|
T Consensus 151 ~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 230 (285)
T 1wdy_A 151 ALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKK 230 (285)
T ss_dssp HHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTT
T ss_pred HHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcC
Confidence 88888888888888877776 77777777777777777777777 77777777777777777777777777777777
Q ss_pred CHHHHHHHHh-CCCCcccCCCCCCCCcchhhhccccccccccCCCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCC
Q psy13737 1213 QISMARLLLD-QSANVTVPKNFPSRPIGILFILFPFIIGYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNAT 1287 (1388)
Q Consensus 1213 ~~~~v~~Ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~ 1287 (1388)
+.+++++|++ .|++++. .+..|+||||+|++.|+.+++++|+++|++++..
T Consensus 231 ~~~~v~~Ll~~~g~~~~~------------------------~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~~~~ 282 (285)
T 1wdy_A 231 HLGLVQRLLEQEHIEIND------------------------TDSDGKTALLLAVELKLKKIAELLCKRGASTDCG 282 (285)
T ss_dssp CHHHHHHHHHSSSCCTTC------------------------CCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCCS
T ss_pred CHHHHHHHHhccCCCccc------------------------cCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcc
Confidence 7777777777 6666554 5566777777777777777777777777776653
No 10
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=4.6e-41 Score=375.18 Aligned_cols=229 Identities=28% Similarity=0.393 Sum_probs=211.4
Q ss_pred CCCCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCccccccCCCcHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCcHHHH
Q psy13737 1128 PNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHI 1207 (1388)
Q Consensus 1128 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~tpL~~ 1207 (1388)
.+.++..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|++.|++++.+|..|+||||+
T Consensus 52 ~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~ 131 (285)
T 3d9h_A 52 LMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFN 131 (285)
T ss_dssp TCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHH
T ss_pred ccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHH
Confidence 35678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCHHHHHHHHhCCCCcccCCCCCCCCcchhhhccccccccccCCCCCCChHHHHHHcCCHHHHHHHHHcCCCCCC-
Q psy13737 1208 ACHYGQISMARLLLDQSANVTVPKNFPSRPIGILFILFPFIIGYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNA- 1286 (1388)
Q Consensus 1208 A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~- 1286 (1388)
|+..|+.+++++|++.|++++. +..|.||||+|+..|+.+++++|++.|++++.
T Consensus 132 A~~~~~~~~v~~Ll~~g~~~~~-------------------------~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~ 186 (285)
T 3d9h_A 132 ACVSGSWDCVNLLLQHGASVQP-------------------------ESDLASPIHEAARRGHVECVNSLIAYGGNIDHK 186 (285)
T ss_dssp HHHHTCHHHHHHHHHTTCCSSC-------------------------SCTTSCHHHHHHHHTCHHHHHHHHHTTCCTTCC
T ss_pred HHHcCHHHHHHHHHHCCCCCCC-------------------------CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCc
Confidence 9999999999999999988753 44599999999999999999999999999987
Q ss_pred CCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH
Q psy13737 1287 TNKGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQ 1366 (1388)
Q Consensus 1287 ~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~ga~~~~~d~~G~tpL~~A~~ 1366 (1388)
+..|+||||+|+..|+.++|++|++.|++++. +..|+||||+|+..|+.+++++|+++|++++.+|.+|+||||+|+
T Consensus 187 d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~- 263 (285)
T 3d9h_A 187 ISHLGTPLYLACENQQRACVKKLLESGADVNQ--GKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVP- 263 (285)
T ss_dssp BTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC--CBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSC-
T ss_pred CCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCC--CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHhc-
Confidence 56899999999999999999999999999985 457999999999999999999999999999999999999999999
Q ss_pred hCcHHHHHHHHHC-CCCCCC
Q psy13737 1367 QGHSTIVALLLDR-GASPNA 1385 (1388)
Q Consensus 1367 ~g~~~~v~~Ll~~-ga~~~~ 1385 (1388)
++.+++++|+++ |+++..
T Consensus 264 -~~~~~~~~Ll~~~~a~l~~ 282 (285)
T 3d9h_A 264 -PESPLAQLFLEREGASLPK 282 (285)
T ss_dssp -TTSHHHHHHHHHC------
T ss_pred -CccHHHHHHHHhhccCCCC
Confidence 456999999998 887653
No 11
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=5e-39 Score=352.80 Aligned_cols=232 Identities=28% Similarity=0.382 Sum_probs=181.5
Q ss_pred CCCCCCCCCCcHHHHHHhcC-------------CHHHHHHHHhCCCCccc-cccCCCcHHHHHHhcCcHHHHHHHHhCCC
Q psy13737 1127 KPNAESVAGFTPLHLSASEG-------------HADMSAMLLEHGADVSH-AAKNGLTPLHLCAQEDRVGVAELLLKNNA 1192 (1388)
Q Consensus 1127 ~~~~~~~~g~t~L~~A~~~~-------------~~~~v~~Ll~~g~d~~~-~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~ 1192 (1388)
|+|.+|..|.||||+|+..| +.+++++|++.|++++. .|..|+||||+|+..|+.+++++|++.|+
T Consensus 2 dvn~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~ 81 (253)
T 1yyh_A 2 DVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASA 81 (253)
T ss_dssp --------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CCCCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Confidence 67889999999999999977 89999999999999965 48999999999999999999999999999
Q ss_pred CCCCCCCCCCcHHHHHHHhCCHHHHHHHHhCCC-CcccCCCCCCCCcchhhhccccccccccCCCCCCChHHHHHHcCCH
Q psy13737 1193 QVDTPTKKGFTPLHIACHYGQISMARLLLDQSA-NVTVPKNFPSRPIGILFILFPFIIGYTNTTDQGFTPLHHSAQQGHS 1271 (1388)
Q Consensus 1193 ~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~ 1271 (1388)
+++.+|..|+||||+|+..|+.+++++|+++++ +++. .+..|.||||+|+..|+.
T Consensus 82 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~------------------------~~~~g~t~L~~A~~~~~~ 137 (253)
T 1yyh_A 82 DANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDA------------------------RMHDGTTPLILAARLAVE 137 (253)
T ss_dssp CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTC------------------------CCTTCCCHHHHHHHHTCS
T ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccc------------------------cCCCCCcHHHHHHHcChH
Confidence 999999999999999999999999999999987 5543 677899999999999999
Q ss_pred HHHHHHHHcCCCCCC-CCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC
Q psy13737 1272 TIVALLLDRGASPNA-TNKGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANV 1350 (1388)
Q Consensus 1272 ~~v~~Ll~~g~~~~~-~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~ga~~ 1350 (1388)
+++++|++.|++++. +..|+||||+|+..|+.++|++|+++|++++..+. .|+||||+|+..|+.+++++|+++|+++
T Consensus 138 ~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~-~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 216 (253)
T 1yyh_A 138 GMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNN-REETPLFLAAREGSYETAKVLLDHFANR 216 (253)
T ss_dssp SHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCC-CCCCHHHHHHHCCCHHHHHHHHHcCCCc
Confidence 999999999999987 56799999999999999999999999999998874 7999999999999999999999999999
Q ss_pred CCCCCCCCcHHHHHHHhCcHHHHHHHHHCCCCC
Q psy13737 1351 SCTTDQGFTPLHHSAQQGHSTIVALLLDRGASP 1383 (1388)
Q Consensus 1351 ~~~d~~G~tpL~~A~~~g~~~~v~~Ll~~ga~~ 1383 (1388)
+.+|..|+||||+|+++|+.+|+++|.+....+
T Consensus 217 ~~~d~~g~tpl~~A~~~g~~~i~~~l~~~~~~~ 249 (253)
T 1yyh_A 217 DITDHMDRLPRDIAQERMHHDIVRLLDLEHHHH 249 (253)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHC-----
T ss_pred cccccCCCCHHHHHHHcCCHHHHHHHHHHhhhc
Confidence 999999999999999999999999999865443
No 12
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=9e-39 Score=356.65 Aligned_cols=229 Identities=25% Similarity=0.345 Sum_probs=177.5
Q ss_pred CCCCCCCCCcHHHHHhhcCcHHHHHHHHHcCCChHHHHHHHhcCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCc
Q psy13737 1082 VDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADV 1161 (1388)
Q Consensus 1082 ~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~l~~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~ 1161 (1388)
++..|.+|+||||+|+..|+.+++++|++ .|++++.++..|.||||+|+..|+.+++++|+++|+++
T Consensus 52 ~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~-------------~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~ 118 (285)
T 3d9h_A 52 LMGDAVSDWSPMHEAAIHGHQLSLRNLIS-------------QGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQV 118 (285)
T ss_dssp TCSSSCCSCCHHHHHHHTTCHHHHHHHHH-------------TTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCS
T ss_pred ccCCCccCCCHHHHHHHcCCHHHHHHHHH-------------CCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCC
Confidence 34456666666666666665555444433 34556667777778888888888888888888888888
Q ss_pred cccccCCCcHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCcccCCCCCCCCcchh
Q psy13737 1162 SHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRPIGIL 1241 (1388)
Q Consensus 1162 ~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~ 1241 (1388)
+..|..|.||||+|+..++.+++++|++.|++++..+ .|.||||+|+..|+.+++++|++.|++++.
T Consensus 119 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~------------ 185 (285)
T 3d9h_A 119 NGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPES-DLASPIHEAARRGHVECVNSLIAYGGNIDH------------ 185 (285)
T ss_dssp SCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSC-TTSCHHHHHHHHTCHHHHHHHHHTTCCTTC------------
T ss_pred CCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCC------------
Confidence 8888888888888888888888888888888877544 488888888888888888888888887764
Q ss_pred hhccccccccccCCCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCCCC
Q psy13737 1242 FILFPFIIGYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATNKGFTPLHHSAQQGHSTIVALLLDRGASPNATNK 1321 (1388)
Q Consensus 1242 ~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~~~~~~~ 1321 (1388)
.+..|+||||+|+..|+.+++++|++.|++++.+..|+||||+|+..|+.++|++|+++|++++..+.
T Consensus 186 ------------~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~ 253 (285)
T 3d9h_A 186 ------------KISHLGTPLYLACENQQRACVKKLLESGADVNQGKGQDSPLHAVVRTASEELACLLMDFGADTQAKNA 253 (285)
T ss_dssp ------------CBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred ------------cCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCC
Confidence 56778888888888888888888888888888777888899999888888899999988888887764
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHhC-CCCCC
Q psy13737 1322 TRGFTPLHIACHYGQISMARLLLDQ-SANVS 1351 (1388)
Q Consensus 1322 ~~g~T~Lh~A~~~~~~~~v~~Ll~~-ga~~~ 1351 (1388)
.|+||||+|+ ++.+++++|+++ |+++.
T Consensus 254 -~g~t~l~~A~--~~~~~~~~Ll~~~~a~l~ 281 (285)
T 3d9h_A 254 -EGKRPVELVP--PESPLAQLFLEREGASLP 281 (285)
T ss_dssp -TSCCGGGGSC--TTSHHHHHHHHHC-----
T ss_pred -CCCCHHHHhc--CccHHHHHHHHhhccCCC
Confidence 6889999888 456888888887 77664
No 13
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=1e-38 Score=351.92 Aligned_cols=249 Identities=24% Similarity=0.321 Sum_probs=207.8
Q ss_pred CCCcHHHHHhhcCcHHHHHHHHHcCCChHHHHHHHhcCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCccccccC
Q psy13737 1088 NGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKN 1167 (1388)
Q Consensus 1088 ~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~l~~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~~~~~~~ 1167 (1388)
+|+||||+|+..|+.+++++|++ .|++++.++..|.||||+|+..|+.+++++|+++|++++..|..
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~-------------~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~ 68 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLIS-------------QGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTAD 68 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHH-------------TTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHH-------------CCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC
Confidence 57788888888777766665554 46778888888999999999999999999999999999999999
Q ss_pred CCcHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCcccCCCCCCCCcchhhhcccc
Q psy13737 1168 GLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRPIGILFILFPF 1247 (1388)
Q Consensus 1168 g~t~Lh~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~ 1247 (1388)
|+||||+|+..|+.+++++|+++|++++. +..|+||||+|+..|+.+++++|++.|++++.
T Consensus 69 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------------------ 129 (261)
T 2xai_A 69 WHTPLFNACVSGSWDCVNLLLQHGASVQP-ESDLASPIHEAARRGHVECVNSLIAYGGNIDH------------------ 129 (261)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCSSC-SCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC------------------
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCc------------------
Confidence 99999999999999999999999988875 44588999999999999999999999888765
Q ss_pred ccccccCCCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCCCCcH
Q psy13737 1248 IIGYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATNKGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTP 1327 (1388)
Q Consensus 1248 ~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~T~ 1327 (1388)
.+..|+||||+|+..|+.+++++|++.|++++.+..|+||||+|+..|+.++|++|+++|++++..+. .|+||
T Consensus 130 ------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d~-~g~tp 202 (261)
T 2xai_A 130 ------KISHLGTPLYLACENQQRACVKKLLESGADVNQGKGQDSPLHAVARTASEELACLLMDFGADTQAKNA-EGKRP 202 (261)
T ss_dssp ------CBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTTCCBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TSCCG
T ss_pred ------CCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCcCC-CCCCh
Confidence 56788899999999999999999999999988888899999999999999999999999999887764 69999
Q ss_pred HHHHHHcCCHHHHHHHHhCCCC--------CCCCCCCCCcHHHHHHHhCcHHHHHHHH
Q psy13737 1328 LHIACHYGQISMARLLLDQSAN--------VSCTTDQGFTPLHHSAQQGHSTIVALLL 1377 (1388)
Q Consensus 1328 Lh~A~~~~~~~~v~~Ll~~ga~--------~~~~d~~G~tpL~~A~~~g~~~~v~~Ll 1377 (1388)
||+|+..+ +++++|+++++. ++.+|..|+||||+|.+....+.++-++
T Consensus 203 l~~A~~~~--~~~~~ll~~~~~~~l~~~~~~~~r~~~g~t~l~~~~~~~~p~~l~~~l 258 (261)
T 2xai_A 203 VELVPPES--PLAQLFLEREGPPSLMQLCRLRIRKCFGIQQHHKITKLVLPEDLKQFL 258 (261)
T ss_dssp GGGSCTTC--THHHHHHHC-CCCCHHHHHHHHHHTTSCTTCGGGGGGSSSCHHHHHHH
T ss_pred hhhccccc--cHHHHHHhccCCccHHHHHHHHHHHHhchhccccCcccCCcHHHHHHH
Confidence 99998655 488888888764 3467888999999988877776666554
No 14
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=3.3e-38 Score=347.83 Aligned_cols=222 Identities=27% Similarity=0.404 Sum_probs=208.1
Q ss_pred CCCcHHHHHHhcCCHHHHHHHHhCCCCccccccCCCcHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHhCC
Q psy13737 1134 AGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQ 1213 (1388)
Q Consensus 1134 ~g~t~L~~A~~~~~~~~v~~Ll~~g~d~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~tpL~~A~~~g~ 1213 (1388)
+|+||||+|+..|+.+++++|++.|++++..|..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGS 81 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCC
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCcccCCCCCCCCcchhhhccccccccccCCCCCCChHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCc
Q psy13737 1214 ISMARLLLDQSANVTVPKNFPSRPIGILFILFPFIIGYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNA-TNKGFT 1292 (1388)
Q Consensus 1214 ~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~-~~~g~t 1292 (1388)
.+++++|+++|++++. +.+|.||||+|+..|+.+++++|++.|++++. +..|+|
T Consensus 82 ~~~v~~Ll~~g~~~~~-------------------------~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t 136 (261)
T 2xai_A 82 WDCVNLLLQHGASVQP-------------------------ESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGT 136 (261)
T ss_dssp HHHHHHHHHTTCCSSC-------------------------SCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBC
T ss_pred HHHHHHHHHCCCCCCC-------------------------CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCC
Confidence 9999999999998763 45699999999999999999999999999987 567999
Q ss_pred HHHHHHhcCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHhCcHHH
Q psy13737 1293 PLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTI 1372 (1388)
Q Consensus 1293 pL~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~ga~~~~~d~~G~tpL~~A~~~g~~~~ 1372 (1388)
|||+|+..|+.+++++|++.|++++. +..|+||||+|+..|+.+++++|+++|++++.+|.+|+||||+|++++ ++
T Consensus 137 ~L~~A~~~~~~~~v~~Ll~~g~~~~~--~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpl~~A~~~~--~~ 212 (261)
T 2xai_A 137 PLYLACENQQRACVKKLLESGADVNQ--GKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVPPES--PL 212 (261)
T ss_dssp HHHHHHHTTCHHHHHHHHHHTCCTTC--CBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCTTC--TH
T ss_pred HHHHHHHhCCHHHHHHHHHcCCCCCC--CCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCChhhhccccc--cH
Confidence 99999999999999999999999985 357999999999999999999999999999999999999999999765 59
Q ss_pred HHHHHHCCCCCC
Q psy13737 1373 VALLLDRGASPN 1384 (1388)
Q Consensus 1373 v~~Ll~~ga~~~ 1384 (1388)
+++|+++++.+.
T Consensus 213 ~~~ll~~~~~~~ 224 (261)
T 2xai_A 213 AQLFLEREGPPS 224 (261)
T ss_dssp HHHHHHC-CCCC
T ss_pred HHHHHhccCCcc
Confidence 999999988764
No 15
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=4.6e-38 Score=343.89 Aligned_cols=233 Identities=29% Similarity=0.371 Sum_probs=208.6
Q ss_pred CCCCCCCCcHHHHHHhcCCHHHHHHHHh----CCCCccccccCCCcHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCcH
Q psy13737 1129 NAESVAGFTPLHLSASEGHADMSAMLLE----HGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTP 1204 (1388)
Q Consensus 1129 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~----~g~d~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~tp 1204 (1388)
+.+|..|.||||+|+..|+.++++.|++ .|++++..|..|.||||+|+..|+.+++++|++.|++++.++..|+||
T Consensus 3 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 82 (241)
T 1k1a_A 3 TRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTA 82 (241)
T ss_dssp ----CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCH
Confidence 4578899999999999999999999997 799999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCHHHHHHHHhCCCCcccCCCCCCCCcchhhhccccccccccCCCCCCChHHHHHHcCCHHHHHHHHHcCCCC
Q psy13737 1205 LHIACHYGQISMARLLLDQSANVTVPKNFPSRPIGILFILFPFIIGYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASP 1284 (1388)
Q Consensus 1205 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~ 1284 (1388)
||+|+..|+.+++++|++.++.... .....+..|+||||+|+..|+.+++++|++.|+++
T Consensus 83 l~~A~~~~~~~~~~~Ll~~~~~~~~--------------------~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~ 142 (241)
T 1k1a_A 83 AHLACEHRSPTCLRALLDSAAPGTL--------------------DLEARNYDGLTALHVAVNTECQETVQLLLERGADI 142 (241)
T ss_dssp HHHHHHTTCHHHHHHHHHHSCTTSC--------------------CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred HHHHHHcCCHHHHHHHHHcCCCccc--------------------cccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCc
Confidence 9999999999999999999873211 11226778999999999999999999999999999
Q ss_pred CCC--CCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHH
Q psy13737 1285 NAT--NKGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLH 1362 (1388)
Q Consensus 1285 ~~~--~~g~tpL~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~ga~~~~~d~~G~tpL~ 1362 (1388)
+.. ..|+||||+|+..|+.+++++|+++|++++..+. .|+||||+|+..|+.+++++|+++|++++.+|..|+||||
T Consensus 143 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~ 221 (241)
T 1k1a_A 143 DAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMY-SGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLM 221 (241)
T ss_dssp TCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCT-TSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTT
T ss_pred ccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCC-CCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHH
Confidence 874 4799999999999999999999999999998874 7999999999999999999999999999999999999999
Q ss_pred HHHHhCcHHHHHHHHHCCCC
Q psy13737 1363 HSAQQGHSTIVALLLDRGAS 1382 (1388)
Q Consensus 1363 ~A~~~g~~~~v~~Ll~~ga~ 1382 (1388)
+|++.|+.++++.|++++++
T Consensus 222 ~A~~~~~~~i~~~l~~~~aS 241 (241)
T 1k1a_A 222 VARSRRVIDILRGKATRPAS 241 (241)
T ss_dssp TCSSHHHHHHHTC-------
T ss_pred HHHhcCcHHHHhhhccCCCC
Confidence 99999999999999999875
No 16
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=5.3e-39 Score=374.73 Aligned_cols=291 Identities=20% Similarity=0.246 Sum_probs=151.2
Q ss_pred CCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHCCCCCCccCCCCchHHhHHHhcCcHHHHHHHHhCCCCCCCCCCCCCcH
Q psy13737 1013 GAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTP 1092 (1388)
Q Consensus 1013 g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~tpL~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~ 1092 (1388)
+.+++..|.+|+||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|++.|++++ +.+|.||
T Consensus 10 ~~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~--~~~g~t~ 87 (364)
T 3ljn_A 10 KLNRIKSDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHS--LWHGQKP 87 (364)
T ss_dssp ------CCHHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCC--CBTTBCH
T ss_pred CCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcc--ccCCCCH
Confidence 34555667777777777777777777777777777777777777777777777777777777777777443 3456677
Q ss_pred HHHHhhcCcHHHHHHHHHcCCChHHHHHHHhcCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCccccccCCCcHH
Q psy13737 1093 LHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPL 1172 (1388)
Q Consensus 1093 L~~A~~~~~~~~~~~ll~~~~~~~~~~~l~~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~~~~~~~g~t~L 1172 (1388)
||+|+..++.+++++|++.+. +.|++++. ......... ....+++..+..|.|||
T Consensus 88 L~~A~~~g~~~~v~~Ll~~~~---------~~~~~~~~----------~~~~~~~~~------~~~~~~~~~~~~g~t~L 142 (364)
T 3ljn_A 88 IHLAVMANKTDLVVALVEGAK---------ERGQMPES----------LLNECDERE------VNEIGSHVKHCKGQTAL 142 (364)
T ss_dssp HHHHHHTTCHHHHHHHHHHHH---------HHTCCHHH----------HHTCCCCCC------EEEETTEEEEESCCCHH
T ss_pred HHHHHHcCCHHHHHHHHHhcc---------ccCCCHHH----------HHhhcchHh------hhhhccccCCCCCCCHH
Confidence 777776666666666655411 11222222 000000000 00001111444555555
Q ss_pred HHHHhcC--cHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCcccCCCCCCCCcchhhhccccccc
Q psy13737 1173 HLCAQED--RVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRPIGILFILFPFIIG 1250 (1388)
Q Consensus 1173 h~A~~~~--~~~~~~~Ll~~g~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1250 (1388)
|+|+..| +.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++... ..
T Consensus 143 ~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-------------------~~ 203 (364)
T 3ljn_A 143 HWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSS-------------------LR 203 (364)
T ss_dssp HHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSS-------------------CC
T ss_pred HHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhccccccc-------------------cc
Confidence 5555555 55555555555555555555555555555555555555555555544100 00
Q ss_pred cccCCCCCCChHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCC----------
Q psy13737 1251 YTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNA-TNKGFTPLHHSAQQGHSTIVALLLDRGASPNAT---------- 1319 (1388)
Q Consensus 1251 ~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~-~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~~~~~---------- 1319 (1388)
.+..+..|+||||+|+..|+.++|++|+++|++++. +..|+||||+|+..|+.++|++|+++|++++..
T Consensus 204 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~ 283 (364)
T 3ljn_A 204 LDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTV 283 (364)
T ss_dssp TTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHHHHHTCTTBSSSSB
T ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCchhhhcCcccCcccc
Confidence 011344455555555555555555555555555544 334555555555555555555555554432110
Q ss_pred -CCCCCCcHHHHHHHcCCHHHHHHHHhCCCC
Q psy13737 1320 -NKTRGFTPLHIACHYGQISMARLLLDQSAN 1349 (1388)
Q Consensus 1320 -~~~~g~T~Lh~A~~~~~~~~v~~Ll~~ga~ 1349 (1388)
.+..|+|||++|+..|+.+.+..|+..+++
T Consensus 284 ~~~~~~~~~l~~aa~~~~~~~v~~ll~~~~~ 314 (364)
T 3ljn_A 284 LPDRVVWLDFVPAAADPSKQEVLQLLQEKLD 314 (364)
T ss_dssp CGGGCCCCTTSCSSCCHHHHHHHHHHHHHHH
T ss_pred cccccccccchhhhhccCHHHHHHHHHHHHH
Confidence 122455555555555555555555544433
No 17
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=3.3e-39 Score=376.50 Aligned_cols=282 Identities=20% Similarity=0.199 Sum_probs=245.1
Q ss_pred ccccCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHCCCCCCccCCCCchHHhHH
Q psy13737 984 NLRVREQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLT 1063 (1388)
Q Consensus 984 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~tpL~~A 1063 (1388)
+..+..|.||||+|+..|+.++|++|++.|++++..+..|.||||+|+..|+.+++++|++.|++++. ..|+||||+|
T Consensus 14 ~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~--~~g~t~L~~A 91 (364)
T 3ljn_A 14 IKSDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSL--WHGQKPIHLA 91 (364)
T ss_dssp --CCHHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCC--BTTBCHHHHH
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccc--cCCCCHHHHH
Confidence 44567799999999999999999999999999999999999999999999999999999999996554 5799999999
Q ss_pred HhcCcHHHHHHHHhC----CCCCCCCCCCCCcHHHHHhhcCcHHHHHHHHHcCCChHHHHHHHhcCCCCCCCCCCCCcHH
Q psy13737 1064 GKYGHIKVAKLLLQK----DAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPL 1139 (1388)
Q Consensus 1064 ~~~~~~~~~~~Ll~~----~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~l~~~g~~~~~~~~~g~t~L 1139 (1388)
+..|+.+++++|++. +++++. ... ...... ....+++..+..|.|||
T Consensus 92 ~~~g~~~~v~~Ll~~~~~~~~~~~~----------~~~-------------~~~~~~------~~~~~~~~~~~~g~t~L 142 (364)
T 3ljn_A 92 VMANKTDLVVALVEGAKERGQMPES----------LLN-------------ECDERE------VNEIGSHVKHCKGQTAL 142 (364)
T ss_dssp HHTTCHHHHHHHHHHHHHHTCCHHH----------HHT-------------CCCCCC------EEEETTEEEEESCCCHH
T ss_pred HHcCCHHHHHHHHHhccccCCCHHH----------HHh-------------hcchHh------hhhhccccCCCCCCCHH
Confidence 999999999999998 544321 111 000000 01234566788999999
Q ss_pred HHHHhcC--CHHHHHHHHhCCCCccccccCCCcHHHHHHhcCcHHHHHHHHhCCCC-----CCCCCCCCCcHHHHHHHhC
Q psy13737 1140 HLSASEG--HADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQ-----VDTPTKKGFTPLHIACHYG 1212 (1388)
Q Consensus 1140 ~~A~~~~--~~~~v~~Ll~~g~d~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~~-----~~~~~~~g~tpL~~A~~~g 1212 (1388)
|+|+..| +.+++++|+++|++++..|..|+||||+|+..|+.+++++|++.|++ ++.+|..|+||||+|+..|
T Consensus 143 ~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g 222 (364)
T 3ljn_A 143 HWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILIN 222 (364)
T ss_dssp HHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTT
T ss_pred HHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcC
Confidence 9999999 99999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred CHHHHHHHHhCCCCcccCCCCCCCCcchhhhccccccccccCCCCCCChHHHHHHcCCHHHHHHHHHcCCCCCC------
Q psy13737 1213 QISMARLLLDQSANVTVPKNFPSRPIGILFILFPFIIGYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNA------ 1286 (1388)
Q Consensus 1213 ~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~------ 1286 (1388)
+.++|++|+++|++++. .|..|+||||+|+..|+.++|++|+++|++++.
T Consensus 223 ~~~~v~~Ll~~gad~~~------------------------~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~ 278 (364)
T 3ljn_A 223 WEDVAMRFVEMGIDVNM------------------------EDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYH 278 (364)
T ss_dssp CHHHHHHHHTTTCCTTC------------------------CCTTSCCHHHHHHHTCCHHHHHHHHHHSCHHHHHTCTTB
T ss_pred CHHHHHHHHHcCCCCCC------------------------CCCCCCCHHHHHHHhChHHHHHHHHHcCCchhhhcCccc
Confidence 99999999999999876 778999999999999999999999999876421
Q ss_pred -------CCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCCC
Q psy13737 1287 -------TNKGFTPLHHSAQQGHSTIVALLLDRGASPNATN 1320 (1388)
Q Consensus 1287 -------~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~~~~~~ 1320 (1388)
+..|+|||++|+..|+.+.|..|+..+++.....
T Consensus 279 ~~~~~~~~~~~~~~l~~aa~~~~~~~v~~ll~~~~~~~~~~ 319 (364)
T 3ljn_A 279 NGTTVLPDRVVWLDFVPAAADPSKQEVLQLLQEKLDEVVRS 319 (364)
T ss_dssp SSSSBCGGGCCCCTTSCSSCCHHHHHHHHHHHHHHHHHHTC
T ss_pred CcccccccccccccchhhhhccCHHHHHHHHHHHHHHHhhc
Confidence 3458999999999999988888888876654443
No 18
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.1e-38 Score=350.23 Aligned_cols=231 Identities=30% Similarity=0.389 Sum_probs=178.5
Q ss_pred CCCCCCCcHHHHHHhcCCHHHHHHHHhCCCC--------ccccccCCCcHHHHHHhcCcH-HHHHHHHhCCCCCCCCCCC
Q psy13737 1130 AESVAGFTPLHLSASEGHADMSAMLLEHGAD--------VSHAAKNGLTPLHLCAQEDRV-GVAELLLKNNAQVDTPTKK 1200 (1388)
Q Consensus 1130 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d--------~~~~~~~g~t~Lh~A~~~~~~-~~~~~Ll~~g~~~~~~~~~ 1200 (1388)
.+|..+.+||+.|+..|+.++|++|++.|++ ++..+..|.||||.|+..+.. .++++|++.|+++|.+|.+
T Consensus 6 kkd~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~ 85 (269)
T 4b93_B 6 KKDYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQD 85 (269)
T ss_dssp -CCCHHHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCTTCCCTT
T ss_pred ccCccchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCC
Confidence 3566778999999999999999999999876 456778899999999987765 4889999999999999999
Q ss_pred CCcHHHHHHHhCCHHHHHHHHhCCCCcccCCCCCCCCcchhhhccccccccccCCCCCCChHHHHHHcCCHHHHHHHHHc
Q psy13737 1201 GFTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRPIGILFILFPFIIGYTNTTDQGFTPLHHSAQQGHSTIVALLLDR 1280 (1388)
Q Consensus 1201 g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~ 1280 (1388)
|+||||+|+..|+.++|++|++.|++++. .+..|.||+|+|+..++.+++++|++.
T Consensus 86 G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~------------------------~~~~g~t~l~~a~~~~~~~~~~~Ll~~ 141 (269)
T 4b93_B 86 GSSPLHVAALHGRADLIPLLLKHGANAGA------------------------RNADQAVPLHLACQQGHFQVVKCLLDS 141 (269)
T ss_dssp SCCHHHHHHHTTCTTHHHHHHHTTCCTTC------------------------CCTTCCCHHHHHHHHTCHHHHHHHHHT
T ss_pred CCCHHHHHHHcCcHHHHHHHHhcCCCcCc------------------------cCCCCCCccccccccChHHHHHHHHHC
Confidence 99999999999999999999999998875 677899999999999999999999999
Q ss_pred CCCCCC-CCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCc
Q psy13737 1281 GASPNA-TNKGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFT 1359 (1388)
Q Consensus 1281 g~~~~~-~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~ga~~~~~d~~G~t 1359 (1388)
|++++. +..|+||||+|+..|+.++|++|+++|++++..+. .|+||||+|+..|+.++|++|+++|+|++.+|.+|+|
T Consensus 142 g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~-~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~T 220 (269)
T 4b93_B 142 NAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNN-KGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRT 220 (269)
T ss_dssp TCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCT-TSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCC
T ss_pred CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCcccc-CCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCC
Confidence 999997 56799999999999999999999999999998875 7999999999999999999999999999999999999
Q ss_pred HHHHHHHhCc-HHHHHHHHHCCCCCCC
Q psy13737 1360 PLHHSAQQGH-STIVALLLDRGASPNA 1385 (1388)
Q Consensus 1360 pL~~A~~~g~-~~~v~~Ll~~ga~~~~ 1385 (1388)
|||+|+++|+ .+++++|.+.+++++.
T Consensus 221 pL~~A~~~~~i~~lL~~l~~~~~~~~~ 247 (269)
T 4b93_B 221 AVDCAEQNSKIMELLQVVPSCVASLDD 247 (269)
T ss_dssp SGGGSCTTCHHHHHTTC----------
T ss_pred HHHHHHhCCcHHHHHHHHHHhchhhhh
Confidence 9999999887 4666667777776654
No 19
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=6.2e-37 Score=333.62 Aligned_cols=228 Identities=28% Similarity=0.428 Sum_probs=214.0
Q ss_pred CCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCccccccCCCcHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCcHH
Q psy13737 1126 AKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPL 1205 (1388)
Q Consensus 1126 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~tpL 1205 (1388)
.+.+.++..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++.|++++.++..|.|||
T Consensus 2 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 81 (237)
T 3b7b_A 2 MNFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCL 81 (237)
T ss_dssp CCCCCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHH
T ss_pred CCcccccCCCCCHHHHHHHcCcHHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHH
Confidence 35678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCHHHHHHHHhCC-CCcccCCCCCCCCcchhhhccccccccccCCCCCCChHHHHHHcCCHHHHHHHHHcCCCC
Q psy13737 1206 HIACHYGQISMARLLLDQS-ANVTVPKNFPSRPIGILFILFPFIIGYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASP 1284 (1388)
Q Consensus 1206 ~~A~~~g~~~~v~~Ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~ 1284 (1388)
|+|+..|+.+++++|++.+ .+++. .+..|+||||+|+..|+.+++++|++.|+++
T Consensus 82 ~~A~~~~~~~~~~~Ll~~~~~~~~~------------------------~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~ 137 (237)
T 3b7b_A 82 HLAAKKGHYEVVQYLLSNGQMDVNC------------------------QDDGGWTPMIWATEYKHVDLVKLLLSKGSDI 137 (237)
T ss_dssp HHHHHTTCHHHHHHHHTTTCCCTTC------------------------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred HHHHHcCCHHHHHHHHhCCCCCccc------------------------CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 9999999999999999998 55553 6778999999999999999999999999999
Q ss_pred CC-CCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHH
Q psy13737 1285 NA-TNKGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHH 1363 (1388)
Q Consensus 1285 ~~-~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~ga~~~~~d~~G~tpL~~ 1363 (1388)
+. +..|.||||+|+..|+.+++++|++.|++++..+. .|+||||+|+..|+.+++++|+++|++++.+|.+|+||||+
T Consensus 138 ~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~ 216 (237)
T 3b7b_A 138 NIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNI-HGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQC 216 (237)
T ss_dssp TCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCT-TCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHH
T ss_pred CccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCC-CCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHHHH
Confidence 87 56799999999999999999999999999998874 79999999999999999999999999999999999999999
Q ss_pred HHHhCcHHHHHHHHH
Q psy13737 1364 SAQQGHSTIVALLLD 1378 (1388)
Q Consensus 1364 A~~~g~~~~v~~Ll~ 1378 (1388)
|+++|+.+.+..|++
T Consensus 217 A~~~~~~~~~~~l~~ 231 (237)
T 3b7b_A 217 ASLNSQVWSALQMSK 231 (237)
T ss_dssp SCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999865555543
No 20
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=3.6e-38 Score=366.76 Aligned_cols=309 Identities=19% Similarity=0.225 Sum_probs=220.0
Q ss_pred cccccccccCCHHHHHHHHhCCCCCCcCCCCCCCCCCCCcccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHH
Q psy13737 148 TPLHLTGKYGHIKVAKLLLQKDAPVDFQGKAPVDDVTVDYLTALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIA 227 (1388)
Q Consensus 148 ~~l~~A~~~G~~~iv~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A 227 (1388)
.+|..|+..|+.+.+..+++....+.++ .+++.-+...|+++++++++.. ..+..|.||||+|
T Consensus 39 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~g~~~~~~~~~~~-----~~~~~g~t~L~~A 101 (373)
T 2fo1_E 39 HSLLEASYDGYIKRQRNELQHYSLYPNP------------QGYGNGNDFLGDFNHTNLQIPT-----EPEPESPIKLHTE 101 (373)
T ss_dssp ------------------------------------------------------------------------CCCHHHHH
T ss_pred cccccccCCccccchhhhhhhhccccCc------------cccCCCCCcccccccccccccc-----CCCCCCccHHHHH
Confidence 5677788899999999998876544322 1456778888999999998754 4567789999999
Q ss_pred HHcCCHHHHHHHHhCCCCccccc-cCCCchHHHHHHhCCHHHHHHHH--------HcCCCcccccCCCCCHHHHHHHhCc
Q psy13737 228 CKKNRIKVVELLLKHGASIEATT-EVREPMLHIACKKNRIKVVELLL--------KHGASIEATTEVREPMLHIACKKNR 298 (1388)
Q Consensus 228 ~~~g~~~iv~~Ll~~g~~~~~~~-~~~~~~l~~A~~~g~~~iv~~L~--------~~~~~~~~~~~~~~~~l~~A~~~g~ 298 (1388)
+..+. +++++|++ .+++..+ ..|.||||+|+..|+.+++++|+ +.|++++..+..|.||||+|+..|+
T Consensus 102 a~~~~-~~~~~L~~--~~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL~~A~~~g~ 178 (373)
T 2fo1_E 102 AAGSY-AITEPITR--ESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARR 178 (373)
T ss_dssp HHSSS-CCCSCCST--TTTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTC
T ss_pred hcCCc-hHHHHhcc--ccccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCHHHHHHHcCh
Confidence 99665 88888865 4566777 68999999999999998888776 7889999888889999999999999
Q ss_pred HHHHHHHHhCCCCccCcCCCCCCHHHHHHHhCCHHHHHHHHhCC---CCcccccCCCCChHHHHHHcC---cHHHHHHHH
Q psy13737 299 IKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHG---ASIEATTEVREPMLHIACKKN---RIKVVELLL 372 (1388)
Q Consensus 299 ~~iv~~Ll~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~Ll~~g---~~~~~~~~~~~~~l~~A~~~~---~~~iv~~Ll 372 (1388)
.++|++|+++|++++..+..|.|||++|+..|+.+++++|++++ ++++..+..|.|||++|+..+ +.+++++|+
T Consensus 179 ~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll 258 (373)
T 2fo1_E 179 RRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLV 258 (373)
T ss_dssp HHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHH
Confidence 99999999999999988888999999999999999999999887 788888888999999999887 889999999
Q ss_pred hCCCCccc--------ccCCCcChHHHHHHcCCHHHHHHHHHcC-CCcccccCCCCCHHHHHHHcChHHHHHHHHhcCCC
Q psy13737 373 KHGASIEA--------TTEVREPMLHIACKKNRIKVVELLLKHG-ASIEATTEVREPMLHIACKKNRIKVVELLLKHGAS 443 (1388)
Q Consensus 373 ~~~~~~~~--------~~~~~~~~l~~A~~~~~~~iv~~Ll~~g-~~~~~~~~~~~~~l~~A~~~~~~~iv~~L~~~g~~ 443 (1388)
++|++++. .+..|.||||+|+..|+.++|++|++++ ++++..+..|.||||+|+..|+.+++++|+++|++
T Consensus 259 ~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad 338 (373)
T 2fo1_E 259 EKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGAS 338 (373)
T ss_dssp HHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred HCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 99888875 4557888899998888889998888775 88888888888888888888888888888888888
Q ss_pred cccccCCCCCHHHHHHhcCCHHHHHHHHhCCCC
Q psy13737 444 IEATTEVREPMLHIACKKNRIKVVELLLKHGAS 476 (1388)
Q Consensus 444 ~~~~~~~~~~~l~~A~~~g~~~iv~~Ll~~g~~ 476 (1388)
++..+..|.|||++|+.+|+.+++++|++++++
T Consensus 339 ~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~~a~ 371 (373)
T 2fo1_E 339 VEAVDATDHTARQLAQANNHHNIVDIFDRCRPE 371 (373)
T ss_dssp SSCCCSSSCCHHHHHHHTTCHHHHHHHHTTC--
T ss_pred ccCCCCCCCCHHHHHHHcCCHHHHHHHHhcCcc
Confidence 888888888888888888888888888888764
No 21
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=9.8e-37 Score=330.55 Aligned_cols=227 Identities=27% Similarity=0.376 Sum_probs=214.1
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHhCCC-CccccccCCCcHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH
Q psy13737 1132 SVAGFTPLHLSASEGHADMSAMLLEHGA-DVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACH 1210 (1388)
Q Consensus 1132 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-d~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~tpL~~A~~ 1210 (1388)
+..+.||||.|+..|+.++++.|++.+. .++..+..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+.
T Consensus 3 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 82 (231)
T 3aji_A 3 GCVSNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAAS 82 (231)
T ss_dssp CCCSSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHH
T ss_pred CccccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHH
Confidence 3457899999999999999999998764 467789999999999999999999999999999999999999999999999
Q ss_pred hCCHHHHHHHHhCCCCcccCCCCCCCCcchhhhccccccccccCCCCCCChHHHHHHcCCHHHHHHHHHcCCCCCC-CCC
Q psy13737 1211 YGQISMARLLLDQSANVTVPKNFPSRPIGILFILFPFIIGYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNA-TNK 1289 (1388)
Q Consensus 1211 ~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~-~~~ 1289 (1388)
.|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|++.|++++. +..
T Consensus 83 ~~~~~~v~~Ll~~g~~~~~------------------------~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~ 138 (231)
T 3aji_A 83 AGXDEIVKALLVKGAHVNA------------------------VNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHY 138 (231)
T ss_dssp HTCHHHHHHHHHTTCCTTC------------------------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred cCHHHHHHHHHHcCCCCCC------------------------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC
Confidence 9999999999999998765 677899999999999999999999999999987 567
Q ss_pred CCcHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHhCc
Q psy13737 1290 GFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGH 1369 (1388)
Q Consensus 1290 g~tpL~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~ga~~~~~d~~G~tpL~~A~~~g~ 1369 (1388)
|.||||+|+..|+.+++++|++.|++++..+. .|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|++.++
T Consensus 139 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~ 217 (231)
T 3aji_A 139 DATAMHRAAAKGNLKMVHILLFYKASTNIQDT-EGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGLG 217 (231)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSCHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCCccccCC-CCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhhHH
Confidence 99999999999999999999999999998875 79999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCCC
Q psy13737 1370 STIVALLLDRGASP 1383 (1388)
Q Consensus 1370 ~~~v~~Ll~~ga~~ 1383 (1388)
.+++++|+++||+.
T Consensus 218 ~~i~~lL~~~~a~i 231 (231)
T 3aji_A 218 LILKRLAEGEEASM 231 (231)
T ss_dssp HHHHHHHHHHHHCC
T ss_pred HHHHHHHccccccC
Confidence 99999999999874
No 22
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=9.5e-37 Score=334.63 Aligned_cols=229 Identities=34% Similarity=0.413 Sum_probs=124.7
Q ss_pred CCCCCCCCCcHHHHHHHhC-------------hHHHHHHHHHCCCCCCc-cCCCCchHHhHHHhcCcHHHHHHHHhCCCC
Q psy13737 1016 VDSTTKDLYTALHIAAKEG-------------QEEVAAVLLENGASLTS-TTKKGFTPLHLTGKYGHIKVAKLLLQKDAP 1081 (1388)
Q Consensus 1016 ~~~~~~~g~t~L~~A~~~~-------------~~~~~~~Ll~~g~~~~~-~~~~g~tpL~~A~~~~~~~~~~~Ll~~~~~ 1081 (1388)
+|.+|.+|+||||+|+..| +.+++++|++.|++++. .|..|+||||+|+..|+.+++++|++.|++
T Consensus 3 vn~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~ 82 (253)
T 1yyh_A 3 VNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASAD 82 (253)
T ss_dssp -------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CCCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Confidence 4444444555555554443 56666666666666543 355666666666666666666666666666
Q ss_pred CCCCCCCCCcHHHHHhhcCcHHHHHHHHHcCCChHHHHHHHhcCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCc
Q psy13737 1082 VDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADV 1161 (1388)
Q Consensus 1082 ~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~l~~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~ 1161 (1388)
++.+|..|+||||+|+..++.+++++|++.+. .+++..+..|.||||+|+..|+.+++++|++.|+++
T Consensus 83 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~------------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 150 (253)
T 1yyh_A 83 ANIQDNMGRTPLHAAVSADAQGVFQILIRNRA------------TDLDARMHDGTTPLILAARLAVEGMLEDLINSHADV 150 (253)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTT------------SCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCT
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC------------CCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCC
Confidence 66666666666666666665555555444321 145556666666666666666666666666666666
Q ss_pred cccccCCCcHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCcccCCCCCCCCcchh
Q psy13737 1162 SHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRPIGIL 1241 (1388)
Q Consensus 1162 ~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~ 1241 (1388)
+.+|..|+||||+|+..++.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.
T Consensus 151 ~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~------------ 218 (253)
T 1yyh_A 151 NAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDI------------ 218 (253)
T ss_dssp TCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC------------
T ss_pred CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccc------------
Confidence 66666666677766666666666666666666666666666666666666666666666666666554
Q ss_pred hhccccccccccCCCCCCChHHHHHHcCCHHHHHHHHHc
Q psy13737 1242 FILFPFIIGYTNTTDQGFTPLHHSAQQGHSTIVALLLDR 1280 (1388)
Q Consensus 1242 ~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~ 1280 (1388)
++..|+||||+|+++|+.+++++|...
T Consensus 219 ------------~d~~g~tpl~~A~~~g~~~i~~~l~~~ 245 (253)
T 1yyh_A 219 ------------TDHMDRLPRDIAQERMHHDIVRLLDLE 245 (253)
T ss_dssp ------------CCTTCCCHHHHHHHTTCHHHHHHHHC-
T ss_pred ------------cccCCCCHHHHHHHcCCHHHHHHHHHH
Confidence 455666666666666666666666554
No 23
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=2.3e-36 Score=339.56 Aligned_cols=240 Identities=27% Similarity=0.297 Sum_probs=185.5
Q ss_pred CCCCCCCCcHHHHHHhcCCHHHHHHHHhCCCC---ccccccCCCcHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCcHH
Q psy13737 1129 NAESVAGFTPLHLSASEGHADMSAMLLEHGAD---VSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPL 1205 (1388)
Q Consensus 1129 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d---~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~tpL 1205 (1388)
+.+|..|+||||+|+..|+.+++++|++.|++ ++.++..|+||||+|+..|+.+++++|+++|++++.+|..|+|||
T Consensus 3 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL 82 (282)
T 1oy3_D 3 GYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTAL 82 (282)
T ss_dssp CCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHH
T ss_pred CccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHH
Confidence 56788999999999999999999999999998 888999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCHHHHHHHHhCCCCcccCCCCCC-------------CC----------cchhhhccccccccccCCCCCCChH
Q psy13737 1206 HIACHYGQISMARLLLDQSANVTVPKNFPS-------------RP----------IGILFILFPFIIGYTNTTDQGFTPL 1262 (1388)
Q Consensus 1206 ~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~-------------~~----------~~~~~~~~~~~~~~~~~~~~g~t~L 1262 (1388)
|+|+..|+.+++++|++++++......... .+ ......+..........+..|+|||
T Consensus 83 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L 162 (282)
T 1oy3_D 83 HLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPL 162 (282)
T ss_dssp HHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHH
T ss_pred HHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHH
Confidence 999999999999999999887542211000 00 0000111122233455777888888
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCCCCC--CCCcHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHH
Q psy13737 1263 HHSAQQGHSTIVALLLDRGASPNATN--KGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMA 1340 (1388)
Q Consensus 1263 ~~Aa~~g~~~~v~~Ll~~g~~~~~~~--~g~tpL~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~T~Lh~A~~~~~~~~v 1340 (1388)
|+|+..|+.++|++|+++|++++..+ .|+||||+|+..|+.++|++|+++|++++.++. .|+||||+|+..|+.+++
T Consensus 163 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~-~g~tpL~~A~~~~~~~~v 241 (282)
T 1oy3_D 163 HVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMY-GGRTPLGSALLRPNPILA 241 (282)
T ss_dssp HHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHTSSCHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccc-CCCCHHHHHHHcCCcHHH
Confidence 88888888888888888888888743 388888888888888888888888888887764 688888888888888888
Q ss_pred HHHHhCCCCCCCCCCCCCcHHHHHHHhCc
Q psy13737 1341 RLLLDQSANVSCTTDQGFTPLHHSAQQGH 1369 (1388)
Q Consensus 1341 ~~Ll~~ga~~~~~d~~G~tpL~~A~~~g~ 1369 (1388)
++|+++|++++.+|..|+|||++|.....
T Consensus 242 ~~Ll~~ga~~~~~~~~g~tpl~~a~~~~~ 270 (282)
T 1oy3_D 242 RLLRAHGAPEPEDGGDKLSPCSSSGSDSD 270 (282)
T ss_dssp HHHHHTTCCCCCCC---------------
T ss_pred HHHHHcCCCcCcCCCcccccccccCCccc
Confidence 88888888888888888888888877654
No 24
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=3.4e-37 Score=343.59 Aligned_cols=226 Identities=19% Similarity=0.260 Sum_probs=211.7
Q ss_pred CCCCCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCccccccCCCcHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCcHHH
Q psy13737 1127 KPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLH 1206 (1388)
Q Consensus 1127 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~tpL~ 1206 (1388)
+++.+|..|.||||+|+..|+.+++++|+++|++++..+ |+||||+|+..|+.+++++|+++|++++.+|..|+||||
T Consensus 23 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~--g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~ 100 (285)
T 3kea_A 23 DTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALY 100 (285)
T ss_dssp TTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCCT--TCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCC--CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHH
Confidence 578999999999999999999999999999999999884 999999999999999999999999999999999999999
Q ss_pred HHHHhCCHHHHHHHHhCCCCcccCCCCCCCCcchhhhccccccccccCCCCC-CChHHHHHHcCCHHHHHHHHHcCCCCC
Q psy13737 1207 IACHYGQISMARLLLDQSANVTVPKNFPSRPIGILFILFPFIIGYTNTTDQG-FTPLHHSAQQGHSTIVALLLDRGASPN 1285 (1388)
Q Consensus 1207 ~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~t~L~~Aa~~g~~~~v~~Ll~~g~~~~ 1285 (1388)
+|+..|+.+++++|+++|++++. .+..| .||||+|+..|+.+++++|+++|+++.
T Consensus 101 ~A~~~g~~~~v~~Ll~~ga~~~~------------------------~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 156 (285)
T 3kea_A 101 YAVDSGNMQTVKLFVKKNWRLMF------------------------YGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTF 156 (285)
T ss_dssp HHHHTTCHHHHHHHHHHCGGGGG------------------------CSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTC
T ss_pred HHHHcCCHHHHHHHHhcCCCCCc------------------------cCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccc
Confidence 99999999999999999998875 66778 799999999999999999999999885
Q ss_pred CCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCCCCcH-HHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHH
Q psy13737 1286 ATNKGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTP-LHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHS 1364 (1388)
Q Consensus 1286 ~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~T~-Lh~A~~~~~~~~v~~Ll~~ga~~~~~d~~G~tpL~~A 1364 (1388)
....|+||||+|+..|+.++|++|+++|++++..+. .|+|| ||+|+..|+.+++++|+++|++++.+|. .|
T Consensus 157 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~-~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~~~-------~a 228 (285)
T 3kea_A 157 DLAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNS-LLFIPDIKLAIDNKDIEMLQALFKYDINIYSANL-------EN 228 (285)
T ss_dssp CCSTHHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCC-CBCCTTHHHHHHHTCHHHHHHHTTSCBCSTTTTG-------GG
T ss_pred cccCCccHHHHHHHcChHHHHHHHHHcCCCCCcccC-CCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCh-------hh
Confidence 555899999999999999999999999999998875 79998 9999999999999999999999999883 56
Q ss_pred HHhCcHHHHHHHHHCCCCCCCC
Q psy13737 1365 AQQGHSTIVALLLDRGASPNAT 1386 (1388)
Q Consensus 1365 ~~~g~~~~v~~Ll~~ga~~~~~ 1386 (1388)
+..|+.++|++|+++|++++..
T Consensus 229 ~~~~~~~iv~~Ll~~g~~~~~~ 250 (285)
T 3kea_A 229 VLLDDAEIAKMIIEKHVEYKSD 250 (285)
T ss_dssp GTTTCHHHHHHHHHHHHHHTTC
T ss_pred hhcCCHHHHHHHHHcCCCCCCc
Confidence 7899999999999999987653
No 25
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=7.8e-36 Score=326.25 Aligned_cols=236 Identities=27% Similarity=0.335 Sum_probs=216.0
Q ss_pred CCCCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCccccccCCCcHHHHHHhcCcHHHHHHHHhCCCCCCCCCC-CCCcHHH
Q psy13737 1128 PNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTK-KGFTPLH 1206 (1388)
Q Consensus 1128 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~~~~~~~~-~g~tpL~ 1206 (1388)
++..|..|.|||+.|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|++.|++++..+. .|+||||
T Consensus 2 ~~~~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~ 81 (240)
T 3eu9_A 2 MTHIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLH 81 (240)
T ss_dssp CCCCSCGGGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHH
T ss_pred ccccccccchHHHHHHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhH
Confidence 455677899999999999999999999999999999999999999999999999999999999999886654 5999999
Q ss_pred HHHHhCCHHHHHHHHhCCCCcccCCCCCCCCcchhhhccccccccccCCCCCCChHHHHHHcCCHHHHHHHHHcCCCCCC
Q psy13737 1207 IACHYGQISMARLLLDQSANVTVPKNFPSRPIGILFILFPFIIGYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNA 1286 (1388)
Q Consensus 1207 ~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~ 1286 (1388)
+|+..|+.+++++|++.|++++. .+..|.||||+|+..|+.+++++|++.|++++.
T Consensus 82 ~A~~~~~~~~v~~Ll~~g~~~~~------------------------~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~ 137 (240)
T 3eu9_A 82 WATRQGHLSMVVQLMKYGADPSL------------------------IDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDM 137 (240)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTC------------------------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHHcCCHHHHHHHHHcCCCCcc------------------------cCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccc
Confidence 99999999999999999998765 677899999999999999999999999999987
Q ss_pred -CCCCCcHHHHHHhcCc-HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHH
Q psy13737 1287 -TNKGFTPLHHSAQQGH-STIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHS 1364 (1388)
Q Consensus 1287 -~~~g~tpL~~A~~~g~-~~iv~~Ll~~g~~~~~~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~ga~~~~~d~~G~tpL~~A 1364 (1388)
+..|.||||+|+..++ .+++++|++.|++++..+...|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|
T Consensus 138 ~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A 217 (240)
T 3eu9_A 138 MDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLA 217 (240)
T ss_dssp CCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHH
T ss_pred cCCCCCcHHHHHHHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHH
Confidence 5679999999997776 89999999999999988876899999999999999999999999999999999999999999
Q ss_pred HHhCcHHHHHHHHHCCCCCCCCC
Q psy13737 1365 AQQGHSTIVALLLDRGASPNATN 1387 (1388)
Q Consensus 1365 ~~~g~~~~v~~Ll~~ga~~~~~~ 1387 (1388)
++.|+.+++++|+++|++....|
T Consensus 218 ~~~~~~~~v~~L~~~~~~~~~~N 240 (240)
T 3eu9_A 218 KQRKNVWMINHLQEARQAKGYDN 240 (240)
T ss_dssp HHTTCHHHHHHHHHHC-------
T ss_pred HHcCcHHHHHHHHHhhhccCcCC
Confidence 99999999999999999886554
No 26
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=7.4e-36 Score=326.33 Aligned_cols=230 Identities=26% Similarity=0.328 Sum_probs=128.7
Q ss_pred CCCCCcHHHHHHHhChHHHHHHHHH----CCCCCCccCCCCchHHhHHHhcCcHHHHHHHHhCCCCCCCCCCCCCcHHHH
Q psy13737 1020 TKDLYTALHIAAKEGQEEVAAVLLE----NGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHV 1095 (1388)
Q Consensus 1020 ~~~g~t~L~~A~~~~~~~~~~~Ll~----~g~~~~~~~~~g~tpL~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~L~~ 1095 (1388)
|.+|+||||+|+..|+.+++++|++ .|++++..+..|+||||+|+..|+.+++++|++.|++++..+..|+||||+
T Consensus 6 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~ 85 (241)
T 1k1a_A 6 DEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHL 85 (241)
T ss_dssp -CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHH
Confidence 3444444444444444444444443 344444444444444444444444444444444444444444444444444
Q ss_pred HhhcCcHHHHHHHHHcCCChHHHHHHHhcCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCccccc-cCCCcHHHH
Q psy13737 1096 ASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAA-KNGLTPLHL 1174 (1388)
Q Consensus 1096 A~~~~~~~~~~~ll~~~~~~~~~~~l~~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~~~~~-~~g~t~Lh~ 1174 (1388)
|+..++.+++++|++.+.. .+.+++..+..|.||||+|+..|+.+++++|++.|++++..+ ..|.||||+
T Consensus 86 A~~~~~~~~~~~Ll~~~~~---------~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~ 156 (241)
T 1k1a_A 86 ACEHRSPTCLRALLDSAAP---------GTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIH 156 (241)
T ss_dssp HHHTTCHHHHHHHHHHSCT---------TSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHH
T ss_pred HHHcCCHHHHHHHHHcCCC---------ccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHH
Confidence 4444444444444333221 122445556666666666666666777777777777766666 566777777
Q ss_pred HHhcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCcccCCCCCCCCcchhhhccccccccccC
Q psy13737 1175 CAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRPIGILFILFPFIIGYTNT 1254 (1388)
Q Consensus 1175 A~~~~~~~~~~~Ll~~g~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1254 (1388)
|+..++.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++. +
T Consensus 157 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~------------------------~ 212 (241)
T 1k1a_A 157 AVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSL------------------------K 212 (241)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTC------------------------C
T ss_pred HHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCC------------------------c
Confidence 7777777777777777777777677777777777777777777777777666554 4
Q ss_pred CCCCCChHHHHHHcCCHHHHHHHHHcCC
Q psy13737 1255 TDQGFTPLHHSAQQGHSTIVALLLDRGA 1282 (1388)
Q Consensus 1255 ~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~ 1282 (1388)
+..|+||||+|+..|+.++++.|+++++
T Consensus 213 ~~~g~tpl~~A~~~~~~~i~~~l~~~~a 240 (241)
T 1k1a_A 213 NCHNDTPLMVARSRRVIDILRGKATRPA 240 (241)
T ss_dssp CTTSCCTTTTCSSHHHHHHHTC------
T ss_pred CCCCCCHHHHHHhcCcHHHHhhhccCCC
Confidence 5566677777766666666666666554
No 27
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=8.3e-36 Score=334.99 Aligned_cols=251 Identities=27% Similarity=0.318 Sum_probs=200.5
Q ss_pred ccccCCCCcHHHHHHHcCCHHHHHHHHHCCCC---CCCCCCCCCcHHHHHHHhChHHHHHHHHHCCCCCCccCCCCchHH
Q psy13737 984 NLRVREQQTPLHIASRLGNVDIVMLLLQHGAA---VDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPL 1060 (1388)
Q Consensus 984 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~tpL 1060 (1388)
+..+..|.||||+|++.|+.+++++|++.|++ ++.++..|+||||+|+..|+.+++++|+++|++++.++..|+|||
T Consensus 3 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL 82 (282)
T 1oy3_D 3 GYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTAL 82 (282)
T ss_dssp CCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHH
T ss_pred CccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHH
Confidence 45677899999999999999999999999988 888999999999999999999999999999999999999999999
Q ss_pred hHHHhcCcHHHHHHHHhCCCCCCCC-------------CCCCCcHHHHHhhcCcHHHHHHHHHcCCChHHHHHHHhcCCC
Q psy13737 1061 HLTGKYGHIKVAKLLLQKDAPVDFQ-------------GKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAK 1127 (1388)
Q Consensus 1061 ~~A~~~~~~~~~~~Ll~~~~~~~~~-------------~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~l~~~g~~ 1127 (1388)
|+|+..|+.+++++|++.+++.... ...+.++++.+...+.. ......+...+.+
T Consensus 83 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~ 150 (282)
T 1oy3_D 83 HLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPE------------NEEEPRDEDWRLQ 150 (282)
T ss_dssp HHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------------------CCCGGGG
T ss_pred HHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccc------------hhhhhhhhhhhhc
Confidence 9999999999999999998764322 22344555555433221 1223344556788
Q ss_pred CCCCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCccccccC-CCcHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCcHHH
Q psy13737 1128 PNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKN-GLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLH 1206 (1388)
Q Consensus 1128 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~~~~~~~-g~t~Lh~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~tpL~ 1206 (1388)
++.++..|.||||+|+..|+.+++++|+++|++++..+.. |+||||+|+..++.+++++|+++|++++.+|..|+||||
T Consensus 151 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~ 230 (282)
T 1oy3_D 151 LEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLG 230 (282)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHH
Confidence 9999999999999999999999999999999999999864 999999999999999999999999999999999999999
Q ss_pred HHHHhCCHHHHHHHHhCCCCcccCCCCCCCCcchhhhccccccccccCCCCCCChHHHHHHcCC
Q psy13737 1207 IACHYGQISMARLLLDQSANVTVPKNFPSRPIGILFILFPFIIGYTNTTDQGFTPLHHSAQQGH 1270 (1388)
Q Consensus 1207 ~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~ 1270 (1388)
+|+..|+.+++++|+++|++++. ++..|.|||++|.....
T Consensus 231 ~A~~~~~~~~v~~Ll~~ga~~~~------------------------~~~~g~tpl~~a~~~~~ 270 (282)
T 1oy3_D 231 SALLRPNPILARLLRAHGAPEPE------------------------DGGDKLSPCSSSGSDSD 270 (282)
T ss_dssp HHHTSSCHHHHHHHHHTTCCCCC------------------------CC---------------
T ss_pred HHHHcCCcHHHHHHHHcCCCcCc------------------------CCCcccccccccCCccc
Confidence 99999999999999999999876 78899999999987653
No 28
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=6.6e-35 Score=317.58 Aligned_cols=202 Identities=27% Similarity=0.432 Sum_probs=104.6
Q ss_pred CCCCCCCCCcHHHHHHHhChHHHHHHHHHCCCCCCccCCCCchHHhHHHhcCcHHHHHHHHhCCCCCCCCCCCCCcHHHH
Q psy13737 1016 VDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHV 1095 (1388)
Q Consensus 1016 ~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~tpL~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~L~~ 1095 (1388)
++..+..|.||||+|+..|+.+++++|++.|++++..+..|+||||+|+..|+.+++++|++.|++++.++..|.||||+
T Consensus 4 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 83 (237)
T 3b7b_A 4 FKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHL 83 (237)
T ss_dssp CCCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHH
T ss_pred cccccCCCCCHHHHHHHcCcHHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHH
Confidence 33444444444444444444444444444444444444444444444444444444444444444444444444555555
Q ss_pred HhhcCcHHHHHHHHHcCCChHHHHHHHhcCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCccccccCCCcHHHHH
Q psy13737 1096 ASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLC 1175 (1388)
Q Consensus 1096 A~~~~~~~~~~~ll~~~~~~~~~~~l~~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~~~~~~~g~t~Lh~A 1175 (1388)
|+..++.+++++|++.+ ..+++..+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|
T Consensus 84 A~~~~~~~~~~~Ll~~~------------~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A 151 (237)
T 3b7b_A 84 AAKKGHYEVVQYLLSNG------------QMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWA 151 (237)
T ss_dssp HHHTTCHHHHHHHHTTT------------CCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred HHHcCCHHHHHHHHhCC------------CCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHH
Confidence 54444444433333221 133444455555555555555555555555555555555555555555555
Q ss_pred HhcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCccc
Q psy13737 1176 AQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTV 1229 (1388)
Q Consensus 1176 ~~~~~~~~~~~Ll~~g~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~ 1229 (1388)
+..++.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.
T Consensus 152 ~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~ 205 (237)
T 3b7b_A 152 AFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTL 205 (237)
T ss_dssp HHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTC
T ss_pred HHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCc
Confidence 555555555555555555555555555555555555555555555555555443
No 29
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.8e-36 Score=331.09 Aligned_cols=237 Identities=29% Similarity=0.364 Sum_probs=151.4
Q ss_pred ccCCCCchHHhHHHhcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHhhcCcHHHHHHHHHcCCChHHHHHHHhcCCCCCC
Q psy13737 1051 STTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNA 1130 (1388)
Q Consensus 1051 ~~~~~g~tpL~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~l~~~g~~~~~ 1130 (1388)
.+|.++.|||+.|+..|+.++|++|++.+++..... ...++.
T Consensus 6 kkd~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~--------------------------------------~~~~~~ 47 (269)
T 4b93_B 6 KKDYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDA--------------------------------------EDTVSA 47 (269)
T ss_dssp -CCCHHHHHHHHHHHTTCHHHHHHHHTCC---------------------------------------------------
T ss_pred ccCccchhHHHHHHHcCCHHHHHHHHHCCCcccccc--------------------------------------cccccc
Confidence 355667788888888888888888887765421100 011233
Q ss_pred CCCCCCcHHHHHHhcCCH-HHHHHHHhCCCCccccccCCCcHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHH
Q psy13737 1131 ESVAGFTPLHLSASEGHA-DMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIAC 1209 (1388)
Q Consensus 1131 ~~~~g~t~L~~A~~~~~~-~~v~~Ll~~g~d~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~tpL~~A~ 1209 (1388)
.+..|.||||.|+..+.. .++++|++.|+|++.+|.+|+||||+|+..|+.+++++|++.|++++.++..|.||+++|+
T Consensus 48 ~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~ 127 (269)
T 4b93_B 48 ADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLAC 127 (269)
T ss_dssp ---------------------------CCCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred cCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCcccccc
Confidence 455677777777766654 4677788888888888888888888888888888888888888888888888888888888
Q ss_pred HhCCHHHHHHHHhCCCCcccCCCCCCCCcchhhhccccccccccCCCCCCChHHHHHHcCCHHHHHHHHHcCCCCCC-CC
Q psy13737 1210 HYGQISMARLLLDQSANVTVPKNFPSRPIGILFILFPFIIGYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNA-TN 1288 (1388)
Q Consensus 1210 ~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~-~~ 1288 (1388)
..++.+++++|++.|++++. +|..|+||||+||..|+.++|++|+++|++++. +.
T Consensus 128 ~~~~~~~~~~Ll~~g~~~n~------------------------~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~ 183 (269)
T 4b93_B 128 QQGHFQVVKCLLDSNAKPNK------------------------KDLSGNTPLIYACSGGHHELVALLLQHGASINASNN 183 (269)
T ss_dssp HHTCHHHHHHHHHTTCCSCC------------------------CCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCT
T ss_pred ccChHHHHHHHHHCCCCCCC------------------------CCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCcccc
Confidence 88888888888888887765 567788888888888888888888888888876 55
Q ss_pred CCCcHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCC-HHHHHHHHhCCCCC
Q psy13737 1289 KGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQ-ISMARLLLDQSANV 1350 (1388)
Q Consensus 1289 ~g~tpL~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~T~Lh~A~~~~~-~~~v~~Ll~~ga~~ 1350 (1388)
.|+||||+|+..|+.++|++|+++|++++..+. +|+||||+|+++++ .++++.|...++.+
T Consensus 184 ~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~-~G~TpL~~A~~~~~i~~lL~~l~~~~~~~ 245 (269)
T 4b93_B 184 KGNTALHEAVIEKHVFVVELLLLHGASVQVLNK-RQRTAVDCAEQNSKIMELLQVVPSCVASL 245 (269)
T ss_dssp TSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCT-TSCCSGGGSCTTCHHHHHTTC--------
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCC-CCCCHHHHHHhCCcHHHHHHHHHHhchhh
Confidence 688888888888888888888888888887764 68888888887765 23444444444443
No 30
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=2.6e-35 Score=317.27 Aligned_cols=215 Identities=27% Similarity=0.360 Sum_probs=197.4
Q ss_pred CCHHHHHHHHhCCCCcccc-ccCCCcHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhCC
Q psy13737 1146 GHADMSAMLLEHGADVSHA-AKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQS 1224 (1388)
Q Consensus 1146 ~~~~~v~~Ll~~g~d~~~~-~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~ 1224 (1388)
|+.+++++|+++|++++.. |..|+||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|++.+
T Consensus 2 g~~~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~ 81 (223)
T 2f8y_A 2 DAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNR 81 (223)
T ss_dssp ---CCEETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBT
T ss_pred CcHHHHHHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 6778899999999999875 889999999999999999999999999999999999999999999999999999999988
Q ss_pred C-CcccCCCCCCCCcchhhhccccccccccCCCCCCChHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCcHHHHHHhcCc
Q psy13737 1225 A-NVTVPKNFPSRPIGILFILFPFIIGYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNA-TNKGFTPLHHSAQQGH 1302 (1388)
Q Consensus 1225 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~-~~~g~tpL~~A~~~g~ 1302 (1388)
+ +++. .+..|.||||+|+..|+.+++++|++.|++++. +..|+||||+|+..|+
T Consensus 82 ~~~~~~------------------------~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 137 (223)
T 2f8y_A 82 ATDLDA------------------------RMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNN 137 (223)
T ss_dssp TSCTTC------------------------CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTC
T ss_pred CCCccc------------------------CCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCC
Confidence 6 4443 567899999999999999999999999999987 5679999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHHCCCC
Q psy13737 1303 STIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGAS 1382 (1388)
Q Consensus 1303 ~~iv~~Ll~~g~~~~~~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~ga~~~~~d~~G~tpL~~A~~~g~~~~v~~Ll~~ga~ 1382 (1388)
.+++++|+++|++++..+. .|+||||+|+..|+.+++++|+++|++++.+|..|+|||++|+++|+.+++++|+++|+.
T Consensus 138 ~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~ 216 (223)
T 2f8y_A 138 VDAAVVLLKNGANKDMQNN-REETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLV 216 (223)
T ss_dssp HHHHHHHHHTTCCTTCCCT-TCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCS
T ss_pred HHHHHHHHHcCCCCCCcCC-CCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcchHHHHHHHHcCCC
Confidence 9999999999999998874 799999999999999999999999999999999999999999999999999999999997
Q ss_pred CCC
Q psy13737 1383 PNA 1385 (1388)
Q Consensus 1383 ~~~ 1385 (1388)
...
T Consensus 217 ~~~ 219 (223)
T 2f8y_A 217 RSP 219 (223)
T ss_dssp SCC
T ss_pred ccc
Confidence 653
No 31
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=4.3e-35 Score=317.02 Aligned_cols=217 Identities=26% Similarity=0.405 Sum_probs=198.4
Q ss_pred CCcHHHHHHhcCCHHHHHHHHhCCCCccc-cccCCCcHHHHHHhcCcHHHHHHHHhCC--CCCCC-CCCCCCcHHHHHHH
Q psy13737 1135 GFTPLHLSASEGHADMSAMLLEHGADVSH-AAKNGLTPLHLCAQEDRVGVAELLLKNN--AQVDT-PTKKGFTPLHIACH 1210 (1388)
Q Consensus 1135 g~t~L~~A~~~~~~~~v~~Ll~~g~d~~~-~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g--~~~~~-~~~~g~tpL~~A~~ 1210 (1388)
|.||||+|+..|+.++++.|++.|.++.. .+..|.||||+|+..|+.+++++|++.| ++++. ++..|+||||+|+.
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~ 81 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACS 81 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHH
Confidence 78999999999999999999999988765 8999999999999999999999999999 55555 78999999999999
Q ss_pred hCCHHHHHHHHhCC--CCcccCCCCCCCCcchhhhccccccccccCCCCCCChHHHHHHcCCHHHHHHHHHcCCCCCC-C
Q psy13737 1211 YGQISMARLLLDQS--ANVTVPKNFPSRPIGILFILFPFIIGYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNA-T 1287 (1388)
Q Consensus 1211 ~g~~~~v~~Ll~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~-~ 1287 (1388)
.|+.+++++|+++| ++++. .+..|.||||+|+..|+.+++++|+++|++++. +
T Consensus 82 ~~~~~~~~~Ll~~g~~~~~~~------------------------~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~ 137 (228)
T 2dzn_A 82 VGNLEVVKSLYDRPLKPDLNK------------------------ITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKD 137 (228)
T ss_dssp HCCHHHHHHHHSSSSCCCTTC------------------------CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCC
T ss_pred cCCHHHHHHHHhCCCCccccc------------------------CCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccC
Confidence 99999999999998 55443 677899999999999999999999999999987 5
Q ss_pred CCCCcHHHHHHhcCcHHHHHHHHHcC-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH-hCCCCCCCCCCCCCcHHHHHH
Q psy13737 1288 NKGFTPLHHSAQQGHSTIVALLLDRG-ASPNATNKTRGFTPLHIACHYGQISMARLLL-DQSANVSCTTDQGFTPLHHSA 1365 (1388)
Q Consensus 1288 ~~g~tpL~~A~~~g~~~iv~~Ll~~g-~~~~~~~~~~g~T~Lh~A~~~~~~~~v~~Ll-~~ga~~~~~d~~G~tpL~~A~ 1365 (1388)
..|+||||+|+..|+.+++++|++.| ++++..+. .|+||||+|+..|+.+++++|+ ++|++++.+|.+|+||||+|+
T Consensus 138 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~-~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~ 216 (228)
T 2dzn_A 138 KFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDK-QGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVAL 216 (228)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCT-TSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCS
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCC-CCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHHH
Confidence 67999999999999999999999999 88887764 7999999999999999999999 899999999999999999997
Q ss_pred HhCcHHHHHHHHHC
Q psy13737 1366 QQGHSTIVALLLDR 1379 (1388)
Q Consensus 1366 ~~g~~~~v~~Ll~~ 1379 (1388)
+. +++++|+++
T Consensus 217 ~~---~~~~~l~~~ 227 (228)
T 2dzn_A 217 NE---QVKKFFLNN 227 (228)
T ss_dssp ST---THHHHHHTT
T ss_pred HH---HHHHHHHhc
Confidence 65 566777653
No 32
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=1e-34 Score=314.56 Aligned_cols=225 Identities=30% Similarity=0.417 Sum_probs=212.7
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCC-CCCCCCCCCCcHHHHHHHhChHHHHHHHHHCCCCCCccCCCCchHHhHHHhcC
Q psy13737 989 EQQTPLHIASRLGNVDIVMLLLQHGA-AVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYG 1067 (1388)
Q Consensus 989 ~~~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~tpL~~A~~~~ 1067 (1388)
.+.||||.|+..|+.+.+++|++.+. .++..+..|.||||+|+..|+.+++++|++.|++++.++..|+||||+|+..|
T Consensus 5 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 84 (231)
T 3aji_A 5 VSNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAG 84 (231)
T ss_dssp CSSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHT
T ss_pred cccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcC
Confidence 47899999999999999999998764 46778999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHhCCCCCCCCCCCCCcHHHHHhhcCcHHHHHHHHHcCCChHHHHHHHhcCCCCCCCCCCCCcHHHHHHhcCC
Q psy13737 1068 HIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGH 1147 (1388)
Q Consensus 1068 ~~~~~~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~l~~~g~~~~~~~~~g~t~L~~A~~~~~ 1147 (1388)
+.+++++|++.|++++.+|..|.||||+|+..++.+++++|+ +.|++++.++..|.||||+|+..|+
T Consensus 85 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll-------------~~g~~~~~~~~~g~t~L~~A~~~~~ 151 (231)
T 3aji_A 85 XDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLL-------------EGGANPDAKDHYDATAMHRAAAKGN 151 (231)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-------------HTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred HHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH-------------HcCCCCCCcCCCCCcHHHHHHHcCC
Confidence 999999999999999999999999999999998877766655 4577889999999999999999999
Q ss_pred HHHHHHHHhCCCCccccccCCCcHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhCCCC
Q psy13737 1148 ADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSAN 1226 (1388)
Q Consensus 1148 ~~~v~~Ll~~g~d~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ 1226 (1388)
.+++++|+++|++++.+|..|.||||+|+..++.+++++|+++|++++.+|..|+|||++|+..++.+++++|+++|++
T Consensus 152 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~lL~~~~a~ 230 (231)
T 3aji_A 152 LKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGLGLILKRLAEGEEAS 230 (231)
T ss_dssp HHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSCHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhhHHHHHHHHHcccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999998764
No 33
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=1.3e-36 Score=346.16 Aligned_cols=276 Identities=17% Similarity=0.176 Sum_probs=207.8
Q ss_pred CCCcHHHHHHHhChHHHHHHHHHCCCCCCccCCCCchHHhHHHhcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHhhcCc
Q psy13737 1022 DLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDH 1101 (1388)
Q Consensus 1022 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~tpL~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~ 1101 (1388)
...+|+| ....+++++|++.|++++..+..|.|+++ |+.+++++|+++|++++ .+++++|+....
T Consensus 22 ~~~~~~~----~~~~dlv~~ll~~ga~i~~~~~~g~~~~~-----g~~~~v~~Ll~~g~~~~------~~~~~~a~~~~~ 86 (327)
T 1sw6_A 22 RTAGPII----TFTHDLTSDFLSSPLKIMKALPSPVVNDN-----EQKMKLEAFLQRLLFPE------IQEMPTSLNNDS 86 (327)
T ss_dssp ---CCEE----ECCTTCCCSTTTSSCCCEECBCCCCCCCH-----HHHHHHHHHHHHHHC--------------------
T ss_pred ccccchh----hhcCchHHHHhhCCcccccCCCCCCcccC-----chhHHHHHHHHhccCCc------cccchHhhhccc
Confidence 4455555 35567889999999999999999999987 88999999999988743 246666653211
Q ss_pred HHHHHHHHHcCCChHHHHHHHhcCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCccc-cccCCCcHHHHHHhcCc
Q psy13737 1102 QNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSH-AAKNGLTPLHLCAQEDR 1180 (1388)
Q Consensus 1102 ~~~~~~ll~~~~~~~~~~~l~~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~~~-~~~~g~t~Lh~A~~~~~ 1180 (1388)
.. .-........+.+|.|+..+..+++++|++.|++++. +|..|+||||+|+..|+
T Consensus 87 ~~-----------------------~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~ 143 (327)
T 1sw6_A 87 SN-----------------------RNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIAN 143 (327)
T ss_dssp ----------------------------------------CHHHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTC
T ss_pred cc-----------------------ccccccCCccchhHHHHHhhHHHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCC
Confidence 00 0000111223456889999999999999999999999 89999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCcHHHHHHHhCC---HHHHHHHHhCC-CCcccCCCCCCCCcchhhhccccccccccCCC
Q psy13737 1181 VGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQ---ISMARLLLDQS-ANVTVPKNFPSRPIGILFILFPFIIGYTNTTD 1256 (1388)
Q Consensus 1181 ~~~~~~Ll~~g~~~~~~~~~g~tpL~~A~~~g~---~~~v~~Ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1256 (1388)
.+++++|+++|++++.+|..|+||||+|+..|+ .++++.|++.+ ++++. .+.
T Consensus 144 ~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~------------------------~d~ 199 (327)
T 1sw6_A 144 LELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLIL------------------------EDS 199 (327)
T ss_dssp HHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGE------------------------ECT
T ss_pred HHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccC------------------------CCC
Confidence 999999999999999999999999999999998 67777777765 44443 688
Q ss_pred CCCChHHHHHH----cCCHHHHHHHHHc--------------------CCCCCC-CCCCCcHHHHHHhcCcHHHHHHHHH
Q psy13737 1257 QGFTPLHHSAQ----QGHSTIVALLLDR--------------------GASPNA-TNKGFTPLHHSAQQGHSTIVALLLD 1311 (1388)
Q Consensus 1257 ~g~t~L~~Aa~----~g~~~~v~~Ll~~--------------------g~~~~~-~~~g~tpL~~A~~~g~~~iv~~Ll~ 1311 (1388)
.|+||||+|+. .|+.+++++|++. |++++. +..|+||||+|+. +++|++
T Consensus 200 ~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~------~~~Ll~ 273 (327)
T 1sw6_A 200 MNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD------LKWIIA 273 (327)
T ss_dssp TCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCS------HHHHHH
T ss_pred CCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHH------HHHHHH
Confidence 99999999999 8999999999987 788876 5679999999996 899999
Q ss_pred cCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHhC
Q psy13737 1312 RGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQG 1368 (1388)
Q Consensus 1312 ~g~~~~~~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~ga~~~~~d~~G~tpL~~A~~~g 1368 (1388)
+ +++.++ ..|+||||+|+..|+.++|++|+++||+++.+|.+|+||||+|+++|
T Consensus 274 ~--~~n~~d-~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 274 N--MLNAQD-SNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp H--TTTCCC-TTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTCC--
T ss_pred h--CCCCCC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcC
Confidence 8 466666 47999999999999999999999999999999999999999999875
No 34
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=7.6e-35 Score=329.88 Aligned_cols=249 Identities=24% Similarity=0.352 Sum_probs=201.7
Q ss_pred CCCCCcHHHHHhhcCcHHHHHHHHHcCCChHHHHHHHhcCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCccccc
Q psy13737 1086 GKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAA 1165 (1388)
Q Consensus 1086 ~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~l~~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~~~~~ 1165 (1388)
+.+|.||||.|+..|+.+++++|++ .|++++..+..|.||||+|+..|+.+++++|+++|++++..|
T Consensus 37 ~~~~~t~l~~A~~~g~~~~v~~Ll~-------------~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~ 103 (299)
T 1s70_B 37 KFDDGAVFLAACSSGDTEEVLRLLE-------------RGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPD 103 (299)
T ss_dssp EECHHHHHHHHHHHTCHHHHHHHHH-------------HCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred ccCCccHHHHHHHcCCHHHHHHHHH-------------cCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCC
Confidence 3467789999998888777666554 567778888889999999999999999999999999999999
Q ss_pred cCCCcHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhC-CCCcccCCCCCCCCcchhhhc
Q psy13737 1166 KNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQ-SANVTVPKNFPSRPIGILFIL 1244 (1388)
Q Consensus 1166 ~~g~t~Lh~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~~~~~~~~~~~ 1244 (1388)
..|+||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++.++++.++.. +.+++.
T Consensus 104 ~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~--------------- 168 (299)
T 1s70_B 104 NEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEA--------------- 168 (299)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHH---------------
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchh---------------
Confidence 9999999999999999999999999999999999999999999999998988887763 433321
Q ss_pred cccccccccCCCCCCChHHHHHHcCCHHHHHHHHHcCCCCCC--CCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCCCCC
Q psy13737 1245 FPFIIGYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNA--TNKGFTPLHHSAQQGHSTIVALLLDRGASPNATNKT 1322 (1388)
Q Consensus 1245 ~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~--~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~~~~~~~~ 1322 (1388)
.+..+.++++ ..+..++..+..... +..|.||||+|+..|+.++|++|++.|++++..+.
T Consensus 169 ---------~~~~~~~~~~--------~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~- 230 (299)
T 1s70_B 169 ---------ARKEEERIML--------RDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDY- 230 (299)
T ss_dssp ---------HHHHHHHHHH--------HHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCT-
T ss_pred ---------hhhhhhhHHH--------HHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCC-
Confidence 1111222222 334455666655443 56799999999999999999999999999998874
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHHCC
Q psy13737 1323 RGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRG 1380 (1388)
Q Consensus 1323 ~g~T~Lh~A~~~~~~~~v~~Ll~~ga~~~~~d~~G~tpL~~A~~~g~~~~v~~Ll~~g 1380 (1388)
.|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|++....-+.+++.+..
T Consensus 231 ~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~~~~l~~l~~~~~ 288 (299)
T 1s70_B 231 DGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADEDILGYLEELQKKQN 288 (299)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCSGGGHHHHHHHHHTT
T ss_pred CCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 7999999999999999999999999999999999999999998866555555544443
No 35
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=1.1e-34 Score=323.29 Aligned_cols=208 Identities=17% Similarity=0.148 Sum_probs=139.4
Q ss_pred HHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHCCCCCCccCCCCchHHhHHHhcCcHHHHHHHHhCCCCCC
Q psy13737 1004 DIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKDAPVD 1083 (1388)
Q Consensus 1004 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~tpL~~A~~~~~~~~~~~Ll~~~~~~~ 1083 (1388)
++.++|.+. +++.+|..|+||||+|+..|+.+++++|++.|++++.. +|+||||+|+..|+.+++++|++.|++++
T Consensus 14 ~v~~lL~~~--~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~ 89 (285)
T 3kea_A 14 QLKSFLSSK--DTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLL--ENEFPLHQAATLEDTKIVKILLFSGLDDS 89 (285)
T ss_dssp HHHHHHHST--TTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCC--TTCCHHHHHTTSSSCHHHHHHHHTTCCTT
T ss_pred HHHHHHHhC--CCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCC--CCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence 344444443 56777788888888888888888888888888877766 37788888888888888888888777777
Q ss_pred CCCCCCCcHHHHHhhcCcHHHHHHHHHcCCChHHHHHHHhcCCCCCCCCCCC-CcHHHHHHhcCCHHHHHHHHhCCCCcc
Q psy13737 1084 FQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAG-FTPLHLSASEGHADMSAMLLEHGADVS 1162 (1388)
Q Consensus 1084 ~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~l~~~g~~~~~~~~~g-~t~L~~A~~~~~~~~v~~Ll~~g~d~~ 1162 (1388)
.+|..|+||||+|+..++.+++++|++ .|++++.++..| .||||+|+..|+.+++++|+++|+++.
T Consensus 90 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~-------------~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 156 (285)
T 3kea_A 90 QFDDKGNTALYYAVDSGNMQTVKLFVK-------------KNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTF 156 (285)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHH-------------HCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTC
T ss_pred CcCCCCCcHHHHHHHcCCHHHHHHHHh-------------cCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccc
Confidence 777777777777776666555444433 344555666666 566666666666666666666666552
Q ss_pred ccccCCCcHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCcH-HHHHHHhCCHHHHHHHHhCCCCccc
Q psy13737 1163 HAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTP-LHIACHYGQISMARLLLDQSANVTV 1229 (1388)
Q Consensus 1163 ~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~tp-L~~A~~~g~~~~v~~Ll~~~~~~~~ 1229 (1388)
.. ..|.||||+|+..|+.+++++|+++|++++.+|..|+|| ||+|+..|+.+++++|+++|++++.
T Consensus 157 ~~-~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~ 223 (285)
T 3kea_A 157 DL-AILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYS 223 (285)
T ss_dssp CC-STHHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTT
T ss_pred cc-cCCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 22 156666666666666666666666666666666666665 6666666666666666666665543
No 36
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=1.3e-33 Score=319.84 Aligned_cols=234 Identities=24% Similarity=0.363 Sum_probs=209.8
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHCCCCCCccCCCCchHHhHHHhcC
Q psy13737 988 REQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYG 1067 (1388)
Q Consensus 988 ~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~tpL~~A~~~~ 1067 (1388)
..|.||||.|+..|+.++|++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++..|..|+||||+|+..|
T Consensus 38 ~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g 117 (299)
T 1s70_B 38 FDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCG 117 (299)
T ss_dssp ECHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred cCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHhCCCCCCCCCCCCCcHHHHHhhcCcHHHHHHHHHc-CCChHH------------HHHHHhc-CCCCCCCCC
Q psy13737 1068 HIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYDHQNVALLLLEK-GASMDI------------ATTLLEY-GAKPNAESV 1133 (1388)
Q Consensus 1068 ~~~~~~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~-~~~~~~------------~~~l~~~-g~~~~~~~~ 1133 (1388)
+.+++++|++.|++++..+..|.||||+|+..++.++++.++.. +.+... +..++.. .......+.
T Consensus 118 ~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 197 (299)
T 1s70_B 118 YLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAK 197 (299)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTT
T ss_pred CHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcC
Confidence 99999999999999999999999999999999999999877653 444322 2233333 444455678
Q ss_pred CCCcHHHHHHhcCCHHHHHHHHhCCCCccccccCCCcHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHhCC
Q psy13737 1134 AGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQ 1213 (1388)
Q Consensus 1134 ~g~t~L~~A~~~~~~~~v~~Ll~~g~d~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~tpL~~A~~~g~ 1213 (1388)
.|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|++...
T Consensus 198 ~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~~ 277 (299)
T 1s70_B 198 SGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADEDIL 277 (299)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCSGGG
T ss_pred CCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999976544
Q ss_pred HHHHHHHHh
Q psy13737 1214 ISMARLLLD 1222 (1388)
Q Consensus 1214 ~~~v~~Ll~ 1222 (1388)
+.++.+++
T Consensus 278 -~~l~~l~~ 285 (299)
T 1s70_B 278 -GYLEELQK 285 (299)
T ss_dssp -HHHHHHHH
T ss_pred -HHHHHHHH
Confidence 44444444
No 37
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=4.5e-33 Score=304.35 Aligned_cols=112 Identities=21% Similarity=0.294 Sum_probs=48.9
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHCCCCCCccCC-CCchHHhHHHhcC
Q psy13737 989 EQQTPLHIASRLGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTK-KGFTPLHLTGKYG 1067 (1388)
Q Consensus 989 ~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~g~tpL~~A~~~~ 1067 (1388)
.|.|||+.|++.|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|++.|++++..+. .|.||||+|+..|
T Consensus 8 ~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~ 87 (240)
T 3eu9_A 8 YSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQG 87 (240)
T ss_dssp GGGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHT
T ss_pred ccchHHHHHHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcC
Confidence 344444444444444444444444444444444444444444444444444444444444433222 2444444444444
Q ss_pred cHHHHHHHHhCCCCCCCCCCCCCcHHHHHhhcC
Q psy13737 1068 HIKVAKLLLQKDAPVDFQGKNGVTPLHVASHYD 1100 (1388)
Q Consensus 1068 ~~~~~~~Ll~~~~~~~~~~~~g~t~L~~A~~~~ 1100 (1388)
+.+++++|++.|++++.++..|.||||+|+..+
T Consensus 88 ~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~ 120 (240)
T 3eu9_A 88 HLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFG 120 (240)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcC
Confidence 444444444444444444444444444443333
No 38
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=2.8e-33 Score=301.42 Aligned_cols=211 Identities=27% Similarity=0.325 Sum_probs=95.9
Q ss_pred CCHHHHHHHHHCCCCCCCC-CCCCCcHHHHHHHhChHHHHHHHHHCCCCCCccCCCCchHHhHHHhcCcHHHHHHHHhCC
Q psy13737 1001 GNVDIVMLLLQHGAAVDST-TKDLYTALHIAAKEGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQKD 1079 (1388)
Q Consensus 1001 g~~~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~tpL~~A~~~~~~~~~~~Ll~~~ 1079 (1388)
|+.+++++|+++|++++.. +..|+||||+|+..|+.+++++|++.|++++..+..|+||||+|+..|+.+++++|++.+
T Consensus 2 g~~~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~ 81 (223)
T 2f8y_A 2 DAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNR 81 (223)
T ss_dssp ---CCEETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBT
T ss_pred CcHHHHHHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 3445555555555555443 455555555555555555555555555555555555555555555555555555555554
Q ss_pred C-CCCCCCCCCCcHHHHHhhcCcHHHHHHHHHcCCChHHHHHHHhcCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhCC
Q psy13737 1080 A-PVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHG 1158 (1388)
Q Consensus 1080 ~-~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~l~~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 1158 (1388)
. +++..+..|.||||+|+..++.+++++|+ +.|++++..+..|.||||+|+..|+.+++++|+++|
T Consensus 82 ~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll-------------~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 148 (223)
T 2f8y_A 82 ATDLDARMHDGTTPLILAARLAVEGMLEDLI-------------NSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNG 148 (223)
T ss_dssp TSCTTCCCTTCCCHHHHHHHHTCHHHHHHHH-------------HTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTT
T ss_pred CCCcccCCCCCCcHHHHHHHhCcHHHHHHHH-------------HcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcC
Confidence 4 44444444444444444433333322222 223333333444444444444444444444444444
Q ss_pred CCccccccCCCcHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhCC
Q psy13737 1159 ADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQS 1224 (1388)
Q Consensus 1159 ~d~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~ 1224 (1388)
++++.++..|.||||+|+..++.+++++|+++|++++.+|..|+|||++|+..|+.+++++|+++|
T Consensus 149 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g 214 (223)
T 2f8y_A 149 ANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYN 214 (223)
T ss_dssp CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcchHHHHHHHHcC
Confidence 444444444444444444444444444444444444444444444444444444444444444433
No 39
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=2.5e-33 Score=303.14 Aligned_cols=217 Identities=27% Similarity=0.342 Sum_probs=199.4
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCcHHHHHHHhChHHHHHHHHHCC--CCCCc-cCCCCchHHhHHHh
Q psy13737 990 QQTPLHIASRLGNVDIVMLLLQHGAAVDS-TTKDLYTALHIAAKEGQEEVAAVLLENG--ASLTS-TTKKGFTPLHLTGK 1065 (1388)
Q Consensus 990 ~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll~~g--~~~~~-~~~~g~tpL~~A~~ 1065 (1388)
|.||||+|++.|+.+++++|++.|.++.. .+..|+||||+|+..|+.+++++|++.| ++++. .+..|+||||+|+.
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~ 81 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACS 81 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHH
Confidence 68999999999999999999999987654 8899999999999999999999999999 55666 78899999999999
Q ss_pred cCcHHHHHHHHhCC--CCCCCCCCCCCcHHHHHhhcCcHHHHHHHHHcCCChHHHHHHHhcCCCCCCCCCCCCcHHHHHH
Q psy13737 1066 YGHIKVAKLLLQKD--APVDFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSA 1143 (1388)
Q Consensus 1066 ~~~~~~~~~Ll~~~--~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~l~~~g~~~~~~~~~g~t~L~~A~ 1143 (1388)
.|+.+++++|++.| ++++..+..|.||||+|+..++.+++++|+ +.|++++.++..|.||||+|+
T Consensus 82 ~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll-------------~~g~~~~~~~~~g~t~L~~A~ 148 (228)
T 2dzn_A 82 VGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLI-------------ENGASVRIKDKFNQIPLHRAA 148 (228)
T ss_dssp HCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH-------------HTTCCSCCCCTTSCCHHHHHH
T ss_pred cCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHH-------------HcCCCccccCCCCCCHHHHHH
Confidence 99999999999998 899999999999999999988877766655 457888999999999999999
Q ss_pred hcCCHHHHHHHHhCC-CCccccccCCCcHHHHHHhcCcHHHHHHHH-hCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHH
Q psy13737 1144 SEGHADMSAMLLEHG-ADVSHAAKNGLTPLHLCAQEDRVGVAELLL-KNNAQVDTPTKKGFTPLHIACHYGQISMARLLL 1221 (1388)
Q Consensus 1144 ~~~~~~~v~~Ll~~g-~d~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll-~~g~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll 1221 (1388)
..|+.+++++|++.| ++++.+|..|+||||+|+..++.+++++|+ +.|++++.+|..|+|||++|+.. +++++|+
T Consensus 149 ~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~~---~~~~~l~ 225 (228)
T 2dzn_A 149 SVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNE---QVKKFFL 225 (228)
T ss_dssp HTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSST---THHHHHH
T ss_pred HcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHHHHH---HHHHHHH
Confidence 999999999999999 999999999999999999999999999999 89999999999999999999764 5666666
Q ss_pred h
Q psy13737 1222 D 1222 (1388)
Q Consensus 1222 ~ 1222 (1388)
+
T Consensus 226 ~ 226 (228)
T 2dzn_A 226 N 226 (228)
T ss_dssp T
T ss_pred h
Confidence 4
No 40
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=3.5e-35 Score=334.29 Aligned_cols=282 Identities=15% Similarity=0.054 Sum_probs=203.5
Q ss_pred CcHHHHHHHHhCCCCCccCCCCCCChhhHHHhcChHHHHHHHHhCCCCCCccccccccchhhcccccccchhhhHhhhhc
Q psy13737 891 NRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASSHVVSCYSNVKVHVSLNKIQDVSSSILRLATC 970 (1388)
Q Consensus 891 ~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 970 (1388)
...++|++|+++|++++..+..|.|+++ |+.++|++|+++|+++...... .... .
T Consensus 30 ~~~dlv~~ll~~ga~i~~~~~~g~~~~~-----g~~~~v~~Ll~~g~~~~~~~~~------~a~~--------------~ 84 (327)
T 1sw6_A 30 FTHDLTSDFLSSPLKIMKALPSPVVNDN-----EQKMKLEAFLQRLLFPEIQEMP------TSLN--------------N 84 (327)
T ss_dssp CCTTCCCSTTTSSCCCEECBCCCCCCCH-----HHHHHHHHHHHHHHC--------------------------------
T ss_pred hcCchHHHHhhCCcccccCCCCCCcccC-----chhHHHHHHHHhccCCccccch------Hhhh--------------c
Confidence 3446677777777777777777777765 7777777777777664221000 0000 0
Q ss_pred ccCccccccccccccccCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCcHHHHHHHhChHHHHHHHHHCCCCC
Q psy13737 971 DVLPQCETRLNFSNLRVREQQTPLHIASRLGNVDIVMLLLQHGAAVDS-TTKDLYTALHIAAKEGQEEVAAVLLENGASL 1049 (1388)
Q Consensus 971 ~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~ 1049 (1388)
+..+ ....+.....+.+|.|+..+..+++++|++.|++++. ++..|+||||+|+..|+.+++++|+++|+++
T Consensus 85 ~~~~-------~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~ 157 (327)
T 1sw6_A 85 DSSN-------RNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNR 157 (327)
T ss_dssp --------------------------CHHHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred cccc-------ccccccCCccchhHHHHHhhHHHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 0000 0000111223456888888889999999999999999 8999999999999999999999999999999
Q ss_pred CccCCCCchHHhHHHhcCc---HHHHHHHHhCC-CCCCCCCCCCCcHHHHHhh----cCcHHHHHHHHHcCCChHH----
Q psy13737 1050 TSTTKKGFTPLHLTGKYGH---IKVAKLLLQKD-APVDFQGKNGVTPLHVASH----YDHQNVALLLLEKGASMDI---- 1117 (1388)
Q Consensus 1050 ~~~~~~g~tpL~~A~~~~~---~~~~~~Ll~~~-~~~~~~~~~g~t~L~~A~~----~~~~~~~~~ll~~~~~~~~---- 1117 (1388)
+.+|..|+||||+|+..|+ .++++.|++.+ ++++.+|..|+||||+|+. .++.+++++|++.+.....
T Consensus 158 n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~ 237 (327)
T 1sw6_A 158 LYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQN 237 (327)
T ss_dssp TBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGG
T ss_pred CCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccc
Confidence 9999999999999999998 67777787776 6799999999999999998 8999999999876422110
Q ss_pred ---HHHHHhcCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCccccccCCCcHHHHHHhcCcHHHHHHHHhCCCCC
Q psy13737 1118 ---ATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQV 1194 (1388)
Q Consensus 1118 ---~~~l~~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~~~ 1194 (1388)
...+.+.|++++.++..|.||||.|+. +++|+++ +++.+|..|+||||+|+..|+.+++++|+++|+++
T Consensus 238 ~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~------~~~Ll~~--~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~ 309 (327)
T 1sw6_A 238 RPIQSGTNEKESKPNDKNGERKDSILENLD------LKWIIAN--MLNAQDSNGDTCLNIAARLGNISIVDALLDYGADP 309 (327)
T ss_dssp CCEEEC----------------CHHHHHCS------HHHHHHH--TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCT
T ss_pred hHHHhhhhcccCCcccccccCCChhHHHHH------HHHHHHh--CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 001123389999999999999999985 8999998 68899999999999999999999999999999999
Q ss_pred CCCCCCCCcHHHHHHHhC
Q psy13737 1195 DTPTKKGFTPLHIACHYG 1212 (1388)
Q Consensus 1195 ~~~~~~g~tpL~~A~~~g 1212 (1388)
+.+|..|+||||+|++.|
T Consensus 310 ~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 310 FIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp TCCCTTSCCGGGGTCC--
T ss_pred cccCCCCCCHHHHHHhcC
Confidence 999999999999998765
No 41
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=4.9e-33 Score=301.44 Aligned_cols=199 Identities=30% Similarity=0.386 Sum_probs=136.1
Q ss_pred CCcHHHHHHhcCcHHHHHHHHhC-CCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCcccCCCCCCCCcchhhhccc
Q psy13737 1168 GLTPLHLCAQEDRVGVAELLLKN-NAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRPIGILFILFP 1246 (1388)
Q Consensus 1168 g~t~Lh~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~ 1246 (1388)
|+||||+|+..|+.++++.|++. |++++.+|..|+||||+|+..|+.+++++|++.|+++....
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~--------------- 67 (232)
T 2rfa_A 3 WESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEP--------------- 67 (232)
T ss_dssp TTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCC---------------
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhcccc---------------
Confidence 44555555555555555544444 44555555555555555555555555555555444432100
Q ss_pred cccccccCCCCCCChHHHHHHcCCHHHHHHHHHcCCCCCC--------------CCCCCcHHHHHHhcCcHHHHHHHHHc
Q psy13737 1247 FIIGYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNA--------------TNKGFTPLHHSAQQGHSTIVALLLDR 1312 (1388)
Q Consensus 1247 ~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~--------------~~~g~tpL~~A~~~g~~~iv~~Ll~~ 1312 (1388)
....+..|+||||+|+..|+.+++++|+++|++++. +..|+||||+|+..|+.++|++|+++
T Consensus 68 ----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 143 (232)
T 2rfa_A 68 ----MTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEH 143 (232)
T ss_dssp ----CCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHT
T ss_pred ----ccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 011334455555555555555555555555555544 23699999999999999999999999
Q ss_pred CCCCCCCCCCCCCcHHHHHHHcCCHHHH----HHHHhCCCCC------CCCCCCCCcHHHHHHHhCcHHHHHHHHHCCCC
Q psy13737 1313 GASPNATNKTRGFTPLHIACHYGQISMA----RLLLDQSANV------SCTTDQGFTPLHHSAQQGHSTIVALLLDRGAS 1382 (1388)
Q Consensus 1313 g~~~~~~~~~~g~T~Lh~A~~~~~~~~v----~~Ll~~ga~~------~~~d~~G~tpL~~A~~~g~~~~v~~Ll~~ga~ 1382 (1388)
|++++..+. .|+||||+|+..|+.+++ ++|+++|+++ +.+|..|+||||+|+++|+.++|++|+++|++
T Consensus 144 ga~~~~~d~-~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~ 222 (232)
T 2rfa_A 144 GADIRAQDS-LGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKH 222 (232)
T ss_dssp TCCTTCCCT-TSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CCCCCCCCC-CCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcCcc
Confidence 999998874 799999999999999988 9999999988 58899999999999999999999999999987
Q ss_pred CCCC
Q psy13737 1383 PNAT 1386 (1388)
Q Consensus 1383 ~~~~ 1386 (1388)
+...
T Consensus 223 ~~~~ 226 (232)
T 2rfa_A 223 IAAA 226 (232)
T ss_dssp C---
T ss_pred chhh
Confidence 6543
No 42
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=8.4e-34 Score=308.09 Aligned_cols=221 Identities=23% Similarity=0.294 Sum_probs=180.9
Q ss_pred CCCCCCCCcHHHHHHhcCCHHHHHHHHhCCC----CccccccCCCcHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCcH
Q psy13737 1129 NAESVAGFTPLHLSASEGHADMSAMLLEHGA----DVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTP 1204 (1388)
Q Consensus 1129 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~----d~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~tp 1204 (1388)
+..|..|.||||+|+..|+.++++.|++.+. +++..+..|+||||+|+..++.+++++|++.|++++.+|..|+||
T Consensus 2 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 81 (236)
T 1ikn_D 2 QQLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTP 81 (236)
T ss_dssp -----CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCH
T ss_pred CcCCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCH
Confidence 3567889999999999999999999988765 788999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCHHHHHHHHhCCCCcccCCCCCCCCcchhhhccccccccccCCCCCCChHHHHHHcCCHHHHHHHHHcCCCC
Q psy13737 1205 LHIACHYGQISMARLLLDQSANVTVPKNFPSRPIGILFILFPFIIGYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASP 1284 (1388)
Q Consensus 1205 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~ 1284 (1388)
||+|+..|+.+++++|++.+++..... .....+..|.||||+|+..|+.+++++|+++|+++
T Consensus 82 L~~A~~~~~~~~v~~Ll~~~~~~~~~~------------------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 143 (236)
T 1ikn_D 82 LHLACEQGCLASVGVLTQSCTTPHLHS------------------ILKATNYNGHTCLHLASIHGYLGIVELLVSLGADV 143 (236)
T ss_dssp HHHHHHHTCHHHHHHHHHSTTTTSSSC------------------GGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCT
T ss_pred HHHHHHcCCHHHHHHHHhcccchhHHH------------------HhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 999999999999999999987643211 11236778999999999999999999999999988
Q ss_pred CCC-C-CCCcHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCC--CCCCCCCcH
Q psy13737 1285 NAT-N-KGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVS--CTTDQGFTP 1360 (1388)
Q Consensus 1285 ~~~-~-~g~tpL~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~ga~~~--~~d~~G~tp 1360 (1388)
+.. . .|+||||+|+..|+.++|++|+++|++++..+. .|+||||+|+..|+.+++++|+++|++.. .++..|.||
T Consensus 144 ~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~-~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~ 222 (236)
T 1ikn_D 144 NAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTY-QGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEES 222 (236)
T ss_dssp TCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCT-TCCCGGGGCTTSSCHHHHHHHHTTSCGGGSSCCCCCTTTC
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccC-CCCCHHHHHHccCchHHHHHHHHcchhhhhcCCccchHHH
Confidence 874 3 789999999999999999999999998887764 68999999999999999999999998765 778888888
Q ss_pred HHHHHHhC
Q psy13737 1361 LHHSAQQG 1368 (1388)
Q Consensus 1361 L~~A~~~g 1368 (1388)
.+.+....
T Consensus 223 ~~~~~~~~ 230 (236)
T 1ikn_D 223 YDTESEFT 230 (236)
T ss_dssp CCCC----
T ss_pred Hhhhcccc
Confidence 87665543
No 43
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=1.2e-33 Score=306.95 Aligned_cols=198 Identities=27% Similarity=0.336 Sum_probs=181.4
Q ss_pred ccccCCCcHHHHHHhcCcHHHHHHHHhCCC----CCCCCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCcccCCCCCCCCc
Q psy13737 1163 HAAKNGLTPLHLCAQEDRVGVAELLLKNNA----QVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRPI 1238 (1388)
Q Consensus 1163 ~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~----~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~ 1238 (1388)
.+|..|.||||+|+..|+.++++.|++.+. +++.++..|+||||+|+..|+.+++++|+++|++++.
T Consensus 3 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--------- 73 (236)
T 1ikn_D 3 QLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPEL--------- 73 (236)
T ss_dssp ----CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCC---------
T ss_pred cCCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC---------
Confidence 467899999999999999999999988765 7999999999999999999999999999999999986
Q ss_pred chhhhccccccccccCCCCCCChHHHHHHcCCHHHHHHHHHcCCCCC------C-CCCCCcHHHHHHhcCcHHHHHHHHH
Q psy13737 1239 GILFILFPFIIGYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPN------A-TNKGFTPLHHSAQQGHSTIVALLLD 1311 (1388)
Q Consensus 1239 ~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~------~-~~~g~tpL~~A~~~g~~~iv~~Ll~ 1311 (1388)
.+..|+||||+|+..|+.+++++|++.|++++ . +..|+||||+|+..|+.++|++|++
T Consensus 74 ---------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 138 (236)
T 1ikn_D 74 ---------------RDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVS 138 (236)
T ss_dssp ---------------CCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred ---------------cCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 67789999999999999999999999998742 2 4579999999999999999999999
Q ss_pred cCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHHCCCCCC
Q psy13737 1312 RGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGASPN 1384 (1388)
Q Consensus 1312 ~g~~~~~~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~ga~~~~~d~~G~tpL~~A~~~g~~~~v~~Ll~~ga~~~ 1384 (1388)
+|++++..+...|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+++|+.+++++|+++||++.
T Consensus 139 ~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~ 211 (236)
T 1ikn_D 139 LGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENL 211 (236)
T ss_dssp HTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGG
T ss_pred cCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhhh
Confidence 9999998886579999999999999999999999999999999999999999999999999999999999876
No 44
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=4.5e-32 Score=272.56 Aligned_cols=158 Identities=37% Similarity=0.618 Sum_probs=146.1
Q ss_pred cHHHHHHHhCCHHHHHHHHhCCCCcccCCCCCCCCcchhhhccccccccccCCCCCCChHHHHHHcCCHHHHHHHHHcCC
Q psy13737 1203 TPLHIACHYGQISMARLLLDQSANVTVPKNFPSRPIGILFILFPFIIGYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGA 1282 (1388)
Q Consensus 1203 tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~ 1282 (1388)
++|+.||+.|+.++|+.|+++|++++. +|..|+||||+|+..|+.+++++|++.|+
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~------------------------~d~~g~t~l~~a~~~~~~~~~~~ll~~ga 61 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADVNA------------------------SDSDGRTPLHHAAENGHKEVVKLLISKGA 61 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTC------------------------CCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCC------------------------cCCCCCCHHHHHHHcCCHHHHHHHHhccc
Confidence 479999999999999999999999876 78899999999999999999999999999
Q ss_pred CCCC-CCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHH
Q psy13737 1283 SPNA-TNKGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPL 1361 (1388)
Q Consensus 1283 ~~~~-~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~ga~~~~~d~~G~tpL 1361 (1388)
+++. +..|+||||+|+..|+.++|++|+++|++++.++. +|+||||+|+..|+.++|++|+++|++++.+|.+|+|||
T Consensus 62 d~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~-~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL 140 (169)
T 4gpm_A 62 DVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDS-DGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPL 140 (169)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred chhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHH
Confidence 9997 56799999999999999999999999999998875 799999999999999999999999999999999999999
Q ss_pred HHHHHhCcHHHHHHHHHCCCCCCC
Q psy13737 1362 HHSAQQGHSTIVALLLDRGASPNA 1385 (1388)
Q Consensus 1362 ~~A~~~g~~~~v~~Ll~~ga~~~~ 1385 (1388)
|+|+++|+.++|++|+++||+++-
T Consensus 141 ~~A~~~g~~~iv~~Ll~~GA~ie~ 164 (169)
T 4gpm_A 141 DLAREHGNEEVVKLLEKQGGWLEH 164 (169)
T ss_dssp HHHHHTTCHHHHHHHHTC------
T ss_pred HHHHHcCCHHHHHHHHHCCCCcCC
Confidence 999999999999999999999864
No 45
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.98 E-value=7.6e-32 Score=292.09 Aligned_cols=210 Identities=28% Similarity=0.364 Sum_probs=183.3
Q ss_pred CCCcHHHHHHhcCCHHHHHHHHhC-CCCccccccCCCcHHHHHHhcCcHHHHHHHHhCCCCC-----CCCCCCCCcHHHH
Q psy13737 1134 AGFTPLHLSASEGHADMSAMLLEH-GADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQV-----DTPTKKGFTPLHI 1207 (1388)
Q Consensus 1134 ~g~t~L~~A~~~~~~~~v~~Ll~~-g~d~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~~~-----~~~~~~g~tpL~~ 1207 (1388)
.|.||||+|+..|+.++++.|++. |++++.+|..|+||||+|+..|+.+++++|++.|+++ +.+|..|+||||+
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~ 81 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHI 81 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHH
Confidence 589999999999999999999998 9999999999999999999999999999999999987 7788899999999
Q ss_pred HHHhCCHHHHHHHHhCCCCcccCCCCCCCCcchhhhccccccccccCCCCCCChHHHHHHcCCHHHHHHHHHcCCCCCC-
Q psy13737 1208 ACHYGQISMARLLLDQSANVTVPKNFPSRPIGILFILFPFIIGYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNA- 1286 (1388)
Q Consensus 1208 A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~- 1286 (1388)
|+..|+.+++++|+++|++++...... .........+..|+||||+|+..|+.+++++|+++|++++.
T Consensus 82 A~~~~~~~~v~~Ll~~g~~~~~~~~~~-----------~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~ 150 (232)
T 2rfa_A 82 AVINQNVNLVRALLARGASVSARATGS-----------VFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQ 150 (232)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCCSG-----------GGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCC
T ss_pred HHHcCCHHHHHHHHhCCCCCCcccCCc-----------ceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC
Confidence 999999999999999999987633210 00112233567899999999999999999999999999997
Q ss_pred CCCCCcHHHHHHhcCcHHHH----HHHHHcCCCCC-----CCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCC
Q psy13737 1287 TNKGFTPLHHSAQQGHSTIV----ALLLDRGASPN-----ATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTT 1354 (1388)
Q Consensus 1287 ~~~g~tpL~~A~~~g~~~iv----~~Ll~~g~~~~-----~~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~ga~~~~~d 1354 (1388)
+..|+||||+|+..|+.+++ ++|++.|+++. ...+..|+||||+|+..|+.++|++|+++|+......
T Consensus 151 d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~~~~~~ 227 (232)
T 2rfa_A 151 DSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKHIAAAH 227 (232)
T ss_dssp CTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHC----
T ss_pred CCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcCccchhhh
Confidence 66899999999999999988 99999999884 2334589999999999999999999999998765443
No 46
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.98 E-value=2.8e-31 Score=280.43 Aligned_cols=190 Identities=26% Similarity=0.386 Sum_probs=157.1
Q ss_pred cCCCcHHHHHHhcCcHHHHHHHHhCCC-CCCCCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCcccCCCCCCCCcchhhhc
Q psy13737 1166 KNGLTPLHLCAQEDRVGVAELLLKNNA-QVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRPIGILFIL 1244 (1388)
Q Consensus 1166 ~~g~t~Lh~A~~~~~~~~~~~Ll~~g~-~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~ 1244 (1388)
..+.||||.|+..|+.+.++.|++.+. +++..|..|+||||+|+..|+.+++++|+++|++++.
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--------------- 67 (201)
T 3hra_A 3 TYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINL--------------- 67 (201)
T ss_dssp CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC---------------
T ss_pred cccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC---------------
Confidence 356777777777777777777777655 7777777788888888888888888888888777664
Q ss_pred cccccccccCCCCCCChHHHHHHcCCHHHHHHHH-HcCCCCCC-CCCCCcHHHHHHhcCcHHHHHHHHHcC-CCCCCCCC
Q psy13737 1245 FPFIIGYTNTTDQGFTPLHHSAQQGHSTIVALLL-DRGASPNA-TNKGFTPLHHSAQQGHSTIVALLLDRG-ASPNATNK 1321 (1388)
Q Consensus 1245 ~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll-~~g~~~~~-~~~g~tpL~~A~~~g~~~iv~~Ll~~g-~~~~~~~~ 1321 (1388)
.+..|+||||+|+..|+.+++++|+ ..+++++. +..|+||||+|+..|+.+++++|+++| ++++..+.
T Consensus 68 ---------~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~ 138 (201)
T 3hra_A 68 ---------QNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQND 138 (201)
T ss_dssp ---------CCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCT
T ss_pred ---------CCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCC
Confidence 5667788888888888888888888 45567766 456889999999999999999999998 78877764
Q ss_pred CCCCcHHHHHHHcCC-----HHHHHHHHhCCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHHCC
Q psy13737 1322 TRGFTPLHIACHYGQ-----ISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRG 1380 (1388)
Q Consensus 1322 ~~g~T~Lh~A~~~~~-----~~~v~~Ll~~ga~~~~~d~~G~tpL~~A~~~g~~~~v~~Ll~~g 1380 (1388)
.|+||||+|+..++ .+++++|+++|++++.+|..|+||||+|+++|+.+++++|+++|
T Consensus 139 -~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 139 -FGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp -TSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred -CCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 79999999999888 89999999999999999999999999999999999999999987
No 47
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.98 E-value=1.3e-32 Score=306.19 Aligned_cols=212 Identities=26% Similarity=0.309 Sum_probs=154.5
Q ss_pred ccccccCCCcHHHHHHhcCcHHHHHHHHh----CCCCCC----CCCCCCCcHHHHHHHh---CCHHHHHHHHhCCCCccc
Q psy13737 1161 VSHAAKNGLTPLHLCAQEDRVGVAELLLK----NNAQVD----TPTKKGFTPLHIACHY---GQISMARLLLDQSANVTV 1229 (1388)
Q Consensus 1161 ~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~----~g~~~~----~~~~~g~tpL~~A~~~---g~~~~v~~Ll~~~~~~~~ 1229 (1388)
.+..|..|+||||.|+..|+.++++.|++ .+++++ ..|..|+||||+|+.. |+.+++++|+++|++...
T Consensus 6 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~ 85 (273)
T 2pnn_A 6 EKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDS 85 (273)
T ss_dssp -----CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTC
T ss_pred CCCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccc
Confidence 33444455555555555555554444443 344443 2355566666666654 666666666666544221
Q ss_pred CCCCCCCCcchhhhccccccccccCCCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCCC---------------CCCcHH
Q psy13737 1230 PKNFPSRPIGILFILFPFIIGYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATN---------------KGFTPL 1294 (1388)
Q Consensus 1230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~---------------~g~tpL 1294 (1388)
... + .-......+..|+||||+|+..|+.++|++|+++|++++..+ .|+|||
T Consensus 86 ~~~-----------~--i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL 152 (273)
T 2pnn_A 86 LKQ-----------F--VNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPL 152 (273)
T ss_dssp HHH-----------H--HTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHH
T ss_pred hhH-----------H--hhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHH
Confidence 000 0 000112256789999999999999999999999999999855 599999
Q ss_pred HHHHhcCcHHHHHHHHH---cCCCCCCCCCCCCCcHHHHHHHcCC---------HHHHHHHHhCCCCCC-------CCCC
Q psy13737 1295 HHSAQQGHSTIVALLLD---RGASPNATNKTRGFTPLHIACHYGQ---------ISMARLLLDQSANVS-------CTTD 1355 (1388)
Q Consensus 1295 ~~A~~~g~~~iv~~Ll~---~g~~~~~~~~~~g~T~Lh~A~~~~~---------~~~v~~Ll~~ga~~~-------~~d~ 1355 (1388)
|+|+..|+.++|++|++ .|++++..+. .|+||||+|+..|+ .+++++|+++|++++ .+|.
T Consensus 153 ~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~-~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~ 231 (273)
T 2pnn_A 153 SLAACTNQLAIVKFLLQNSWQPADISARDS-VGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNR 231 (273)
T ss_dssp HHHHHTTCHHHHHHHHHCSSCCCCTTCCCT-TSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCT
T ss_pred HHHHHcCCHHHHHHHHhcccCCCCceeeCC-CCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCC
Confidence 99999999999999999 9999998875 79999999999998 899999999999997 4899
Q ss_pred CCCcHHHHHHHhCcHHHHHHHHHCCC-CCCCC
Q psy13737 1356 QGFTPLHHSAQQGHSTIVALLLDRGA-SPNAT 1386 (1388)
Q Consensus 1356 ~G~tpL~~A~~~g~~~~v~~Ll~~ga-~~~~~ 1386 (1388)
.|+||||+|++.|+.++|++|+++|| ||...
T Consensus 232 ~g~TpL~~A~~~g~~~iv~~Ll~~ga~dp~~~ 263 (273)
T 2pnn_A 232 KGLTPLALAASSGKIGVLAYILQREIHEPECR 263 (273)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHHTC-----
T ss_pred CCCCHHHHHHHhChHHHHHHHHHCCCCCchhh
Confidence 99999999999999999999999999 88654
No 48
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.97 E-value=1.5e-32 Score=302.32 Aligned_cols=202 Identities=26% Similarity=0.247 Sum_probs=165.5
Q ss_pred CCcHHHHHHhcCcHH----HHHHHHhCCCCCCC----CCCCCCcHHHHHHHh---CCHHHHHHHHhCCCCcccCCCCCCC
Q psy13737 1168 GLTPLHLCAQEDRVG----VAELLLKNNAQVDT----PTKKGFTPLHIACHY---GQISMARLLLDQSANVTVPKNFPSR 1236 (1388)
Q Consensus 1168 g~t~Lh~A~~~~~~~----~~~~Ll~~g~~~~~----~~~~g~tpL~~A~~~---g~~~~v~~Ll~~~~~~~~~~~~~~~ 1236 (1388)
|+||||.|+..|+.+ ++++|++.|++++. +|..|+||||+|+.. |+.+++++|++.|++++.....-
T Consensus 2 G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~-- 79 (256)
T 2etb_A 2 DRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLV-- 79 (256)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGG--
T ss_pred CccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhc--
Confidence 566777777777665 44556666777776 677777777777777 77777777777766654321100
Q ss_pred CcchhhhccccccccccCCCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCCCC--------------CCcHHHHHHhcCc
Q psy13737 1237 PIGILFILFPFIIGYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATNK--------------GFTPLHHSAQQGH 1302 (1388)
Q Consensus 1237 ~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~--------------g~tpL~~A~~~g~ 1302 (1388)
-......+..|+||||+|+..|+.++|++|+++|++++..+. |+||||+|+..|+
T Consensus 80 -----------~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~ 148 (256)
T 2etb_A 80 -----------NAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQ 148 (256)
T ss_dssp -----------GCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTC
T ss_pred -----------ccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCC
Confidence 001122456799999999999999999999999999998543 9999999999999
Q ss_pred HHHHHHHHH---cCCCCCCCCCCCCCcHHHHHHH--cCCHH-------HHHHHHhCCCCC-------CCCCCCCCcHHHH
Q psy13737 1303 STIVALLLD---RGASPNATNKTRGFTPLHIACH--YGQIS-------MARLLLDQSANV-------SCTTDQGFTPLHH 1363 (1388)
Q Consensus 1303 ~~iv~~Ll~---~g~~~~~~~~~~g~T~Lh~A~~--~~~~~-------~v~~Ll~~ga~~-------~~~d~~G~tpL~~ 1363 (1388)
.++|++|++ .|++++..+. .|+||||+|+. .++.+ ++++|+++|+++ +.+|..|+||||+
T Consensus 149 ~~~v~~Ll~~~~~ga~~n~~d~-~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~ 227 (256)
T 2etb_A 149 WDVVTYLLENPHQPASLEATDS-LGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKL 227 (256)
T ss_dssp HHHHHHHHHCSSCCCCTTCCCT-TSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHH
T ss_pred HHHHHHHHhccccCCCcCccCC-CCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHH
Confidence 999999999 9999998875 79999999999 88888 999999999999 8999999999999
Q ss_pred HHHhCcHHHHHHHHHCCCCC
Q psy13737 1364 SAQQGHSTIVALLLDRGASP 1383 (1388)
Q Consensus 1364 A~~~g~~~~v~~Ll~~ga~~ 1383 (1388)
|++.|+.++|++|+++|+++
T Consensus 228 A~~~g~~~~v~~Ll~~g~~~ 247 (256)
T 2etb_A 228 AAKEGKIEIFRHILQREFSG 247 (256)
T ss_dssp HHHTTCHHHHHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHhCCCCC
Confidence 99999999999999998764
No 49
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=5.6e-31 Score=264.56 Aligned_cols=156 Identities=37% Similarity=0.599 Sum_probs=96.9
Q ss_pred HHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCcccCCCCCCCCcchhhhccccccc
Q psy13737 1171 PLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRPIGILFILFPFIIG 1250 (1388)
Q Consensus 1171 ~Lh~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1250 (1388)
+|+.||+.|+.++|++|+++|+++|.+|..|+||||+|+..++.+++++|++.|++++.
T Consensus 7 ~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~--------------------- 65 (169)
T 4gpm_A 7 RLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNA--------------------- 65 (169)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC---------------------
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhh---------------------
Confidence 45566666666666666666666666666666666666666666666666666655543
Q ss_pred cccCCCCCCChHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCCCCcHHH
Q psy13737 1251 YTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNA-TNKGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLH 1329 (1388)
Q Consensus 1251 ~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~-~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~T~Lh 1329 (1388)
++..|+||||+|+..|+.++|++|+++|++++. +..|+||||+|+..|+.++|++|+++|++++.++. +|+||||
T Consensus 66 ---~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~-~G~TpL~ 141 (169)
T 4gpm_A 66 ---KDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDS-DGRTPLD 141 (169)
T ss_dssp ---CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHH
T ss_pred ---hccCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCC-CCCCHHH
Confidence 455566666666666666666666666666665 44566666666666777777777777776666553 5777777
Q ss_pred HHHHcCCHHHHHHHHhCCCCCC
Q psy13737 1330 IACHYGQISMARLLLDQSANVS 1351 (1388)
Q Consensus 1330 ~A~~~~~~~~v~~Ll~~ga~~~ 1351 (1388)
+|+.+|+.+++++|+++||+++
T Consensus 142 ~A~~~g~~~iv~~Ll~~GA~ie 163 (169)
T 4gpm_A 142 LAREHGNEEVVKLLEKQGGWLE 163 (169)
T ss_dssp HHHHTTCHHHHHHHHTC-----
T ss_pred HHHHcCCHHHHHHHHHCCCCcC
Confidence 7777777777777777777664
No 50
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.97 E-value=7.7e-32 Score=299.84 Aligned_cols=228 Identities=21% Similarity=0.251 Sum_probs=175.7
Q ss_pred CCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHh----CCCCcc----ccccCCCcHHHHHHhc---CcHHHHHHHHhCCCC
Q psy13737 1125 GAKPNAESVAGFTPLHLSASEGHADMSAMLLE----HGADVS----HAAKNGLTPLHLCAQE---DRVGVAELLLKNNAQ 1193 (1388)
Q Consensus 1125 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~----~g~d~~----~~~~~g~t~Lh~A~~~---~~~~~~~~Ll~~g~~ 1193 (1388)
++..+..+..|.||||.|+..|+.++|+.|++ .+++++ ..+..|+||||+|+.. |+.+++++|++.|++
T Consensus 3 ~a~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~ 82 (273)
T 2pnn_A 3 SAGEKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARK 82 (273)
T ss_dssp --------CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHH
T ss_pred cccCCCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhcc
Confidence 45567788999999999999999998888886 567766 4588999999999986 999999999999865
Q ss_pred C-------C----CCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCcccCCCCCCCCcchhhhccccccccccCCCCCCChH
Q psy13737 1194 V-------D----TPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRPIGILFILFPFIIGYTNTTDQGFTPL 1262 (1388)
Q Consensus 1194 ~-------~----~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L 1262 (1388)
+ + ..|..|+||||+|+..|+.+++++|+++|++++...... .. ........+..|+|||
T Consensus 83 ~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~-----~~-----~~~~~~~~~~~g~tpL 152 (273)
T 2pnn_A 83 TDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGD-----FF-----KKTKGRPGFYFGELPL 152 (273)
T ss_dssp TTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSG-----GG-----SSCSSSCCCCSCBSHH
T ss_pred ccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCcccccc-----cc-----ccccccccccCCCCHH
Confidence 3 2 266789999999999999999999999999987643210 00 0001122345799999
Q ss_pred HHHHHcCCHHHHHHHHH---cCCCCCC-CCCCCcHHHHHHhcCc---------HHHHHHHHHcCCCCCC------CCCCC
Q psy13737 1263 HHSAQQGHSTIVALLLD---RGASPNA-TNKGFTPLHHSAQQGH---------STIVALLLDRGASPNA------TNKTR 1323 (1388)
Q Consensus 1263 ~~Aa~~g~~~~v~~Ll~---~g~~~~~-~~~g~tpL~~A~~~g~---------~~iv~~Ll~~g~~~~~------~~~~~ 1323 (1388)
|+|+..|+.++|++|++ .|++++. +..|+||||+|+..|+ .+++++|+++|++++. ..+..
T Consensus 153 ~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~ 232 (273)
T 2pnn_A 153 SLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRK 232 (273)
T ss_dssp HHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTT
T ss_pred HHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCC
Confidence 99999999999999999 9999997 5689999999999998 7999999999999974 34468
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhCCC-CCCCCCCCCCcHHH
Q psy13737 1324 GFTPLHIACHYGQISMARLLLDQSA-NVSCTTDQGFTPLH 1362 (1388)
Q Consensus 1324 g~T~Lh~A~~~~~~~~v~~Ll~~ga-~~~~~d~~G~tpL~ 1362 (1388)
|+||||+|+..|+.++|++|+++|| |+......+++|=+
T Consensus 233 g~TpL~~A~~~g~~~iv~~Ll~~ga~dp~~~~~~~~~~~~ 272 (273)
T 2pnn_A 233 GLTPLALAASSGKIGVLAYILQREIHEPECRHAAAHHHHH 272 (273)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHHTC--------------
T ss_pred CCCHHHHHHHhChHHHHHHHHHCCCCCchhhhhhhhhccC
Confidence 9999999999999999999999999 88887777777643
No 51
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.97 E-value=3.1e-30 Score=272.40 Aligned_cols=190 Identities=21% Similarity=0.334 Sum_probs=177.4
Q ss_pred CCCCcHHHHHHhcCCHHHHHHHHhCCC-CccccccCCCcHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHh
Q psy13737 1133 VAGFTPLHLSASEGHADMSAMLLEHGA-DVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHY 1211 (1388)
Q Consensus 1133 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~-d~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~tpL~~A~~~ 1211 (1388)
..+.||||.|+..|+.+.++.|++.+. +++..|..|+||||+|+..++.+++++|++.|++++.++..|+||||+|+..
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~ 82 (201)
T 3hra_A 3 TYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQ 82 (201)
T ss_dssp CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred cccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 457899999999999999999999876 9999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHH-hCCCCcccCCCCCCCCcchhhhccccccccccCCCCCCChHHHHHHcCCHHHHHHHHHcC-CCCCC-CC
Q psy13737 1212 GQISMARLLL-DQSANVTVPKNFPSRPIGILFILFPFIIGYTNTTDQGFTPLHHSAQQGHSTIVALLLDRG-ASPNA-TN 1288 (1388)
Q Consensus 1212 g~~~~v~~Ll-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g-~~~~~-~~ 1288 (1388)
|+.+++++|+ ..+++++. .+..|.||||+|+..|+.+++++|++.| ++++. +.
T Consensus 83 ~~~~~~~~Ll~~~~~~~~~------------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~ 138 (201)
T 3hra_A 83 GRTEILAYMLKHATPDLNK------------------------HNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQND 138 (201)
T ss_dssp TCHHHHHHHHHHSCCCTTC------------------------CCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCT
T ss_pred CCHHHHHHHHhccCccccc------------------------ccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCC
Confidence 9999999999 55556554 6778999999999999999999999999 88887 56
Q ss_pred CCCcHHHHHHhcCc-----HHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy13737 1289 KGFTPLHHSAQQGH-----STIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQS 1347 (1388)
Q Consensus 1289 ~g~tpL~~A~~~g~-----~~iv~~Ll~~g~~~~~~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~g 1347 (1388)
.|+||||+|+..+. .+++++|+++|++++..+. .|+||||+|+..|+.+++++|+++|
T Consensus 139 ~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~-~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 139 FGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDN-SGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp TSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred CCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCC-CCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 79999999999988 9999999999999998875 7999999999999999999999987
No 52
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.97 E-value=9.2e-31 Score=288.13 Aligned_cols=205 Identities=23% Similarity=0.230 Sum_probs=176.7
Q ss_pred CCCcHHHHHHhcCCHH----HHHHHHhCCCCccc----cccCCCcHHHHHHhc---CcHHHHHHHHhCCCCCCCC-----
Q psy13737 1134 AGFTPLHLSASEGHAD----MSAMLLEHGADVSH----AAKNGLTPLHLCAQE---DRVGVAELLLKNNAQVDTP----- 1197 (1388)
Q Consensus 1134 ~g~t~L~~A~~~~~~~----~v~~Ll~~g~d~~~----~~~~g~t~Lh~A~~~---~~~~~~~~Ll~~g~~~~~~----- 1197 (1388)
.|+||||.|+..|+.+ ++++|++.|++++. .|..|+||||+|+.. |+.+++++|++.|++++..
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~ 80 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVN 80 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGG
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcc
Confidence 3789999999999997 66788889999998 899999999999999 9999999999999887643
Q ss_pred ------CCCCCcHHHHHHHhCCHHHHHHHHhCCCCcccCCCCCCCCcchhhhccccccccccCCCCCCChHHHHHHcCCH
Q psy13737 1198 ------TKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRPIGILFILFPFIIGYTNTTDQGFTPLHHSAQQGHS 1271 (1388)
Q Consensus 1198 ------~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~ 1271 (1388)
|..|+||||+|+..|+.+++++|+++|++++........ .......+..|+||||+|+..|+.
T Consensus 81 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~-----------~~~~~~~~~~g~tpL~~A~~~~~~ 149 (256)
T 2etb_A 81 AQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFF-----------QKHQGTCFYFGELPLSLAACTKQW 149 (256)
T ss_dssp CCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGG-----------SCCSSSCCCSCSSHHHHHHHTTCH
T ss_pred cccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccc-----------cccccccccCCCCHHHHHHHcCCH
Confidence 478999999999999999999999999998763321000 001111233499999999999999
Q ss_pred HHHHHHHH---cCCCCCC-CCCCCcHHHHHHh--cCcHH-------HHHHHHHcCCCC-------CCCCCCCCCcHHHHH
Q psy13737 1272 TIVALLLD---RGASPNA-TNKGFTPLHHSAQ--QGHST-------IVALLLDRGASP-------NATNKTRGFTPLHIA 1331 (1388)
Q Consensus 1272 ~~v~~Ll~---~g~~~~~-~~~g~tpL~~A~~--~g~~~-------iv~~Ll~~g~~~-------~~~~~~~g~T~Lh~A 1331 (1388)
++|++|++ .|++++. +..|+||||+|+. .++.+ +|++|+++|+++ +..+ ..|+||||+|
T Consensus 150 ~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d-~~g~tpL~~A 228 (256)
T 2etb_A 150 DVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISN-HQGLTPLKLA 228 (256)
T ss_dssp HHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCC-TTSCCHHHHH
T ss_pred HHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccC-CCCCCHHHHH
Confidence 99999999 9999997 5689999999999 88888 999999999999 5555 5799999999
Q ss_pred HHcCCHHHHHHHHhCCCCC
Q psy13737 1332 CHYGQISMARLLLDQSANV 1350 (1388)
Q Consensus 1332 ~~~~~~~~v~~Ll~~ga~~ 1350 (1388)
+..|+.+++++|+++|++.
T Consensus 229 ~~~g~~~~v~~Ll~~g~~~ 247 (256)
T 2etb_A 229 AKEGKIEIFRHILQREFSG 247 (256)
T ss_dssp HHTTCHHHHHHHHHHHHHH
T ss_pred HHhCCHHHHHHHHhCCCCC
Confidence 9999999999999998754
No 53
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.97 E-value=5.5e-31 Score=290.89 Aligned_cols=204 Identities=23% Similarity=0.280 Sum_probs=151.9
Q ss_pred CCCcHHHHHHhcCcHHH----HHHHHhCCCCCCCCC----CCCCcHHHHHH---HhCCHHHHHHHHhCCCCcccCCCCCC
Q psy13737 1167 NGLTPLHLCAQEDRVGV----AELLLKNNAQVDTPT----KKGFTPLHIAC---HYGQISMARLLLDQSANVTVPKNFPS 1235 (1388)
Q Consensus 1167 ~g~t~Lh~A~~~~~~~~----~~~Ll~~g~~~~~~~----~~g~tpL~~A~---~~g~~~~v~~Ll~~~~~~~~~~~~~~ 1235 (1388)
.|+||||.|++.|+.+. +++|++.|++++..+ ..|+||||+|+ ..|+.+++++|++.|++......+
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~-- 81 (260)
T 3jxi_A 4 FNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREF-- 81 (260)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHH--
T ss_pred chHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhh--
Confidence 34444444444444442 222333455544333 44555555555 445555555555554432110000
Q ss_pred CCcchhhhccccccccccCCCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCCC---------------CCCcHHHHHHhc
Q psy13737 1236 RPIGILFILFPFIIGYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATN---------------KGFTPLHHSAQQ 1300 (1388)
Q Consensus 1236 ~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~---------------~g~tpL~~A~~~ 1300 (1388)
........+..|+||||+|+..|+.++|++|+++|++++..+ .|+||||+|+..
T Consensus 82 -----------~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~ 150 (260)
T 3jxi_A 82 -----------INSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACT 150 (260)
T ss_dssp -----------HTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHT
T ss_pred -----------hcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHc
Confidence 000112255689999999999999999999999999999854 699999999999
Q ss_pred CcHHHHHHHHH---cCCCCCCCCCCCCCcHHHHHHHcCC---------HHHHHHHHhCCCCC-------CCCCCCCCcHH
Q psy13737 1301 GHSTIVALLLD---RGASPNATNKTRGFTPLHIACHYGQ---------ISMARLLLDQSANV-------SCTTDQGFTPL 1361 (1388)
Q Consensus 1301 g~~~iv~~Ll~---~g~~~~~~~~~~g~T~Lh~A~~~~~---------~~~v~~Ll~~ga~~-------~~~d~~G~tpL 1361 (1388)
|+.++|++|++ .|++++..+. .|+||||+|+..|+ .+++++|+++|+++ +.+|..|+|||
T Consensus 151 g~~~~v~~Ll~~~~~ga~~~~~d~-~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL 229 (260)
T 3jxi_A 151 NQPHIVHYLTENGHKQADLRRQDS-RGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPL 229 (260)
T ss_dssp TCHHHHHHHHHCSSCCCCTTCCCT-TSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHH
T ss_pred CCHHHHHHHHhccccCCCCcccCC-CCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHH
Confidence 99999999999 9999998875 79999999999887 79999999999999 67999999999
Q ss_pred HHHHHhCcHHHHHHHHHCCCCCC
Q psy13737 1362 HHSAQQGHSTIVALLLDRGASPN 1384 (1388)
Q Consensus 1362 ~~A~~~g~~~~v~~Ll~~ga~~~ 1384 (1388)
|+|++.|+.++|++|+++|+++.
T Consensus 230 ~~A~~~g~~~~v~~Ll~~g~~~~ 252 (260)
T 3jxi_A 230 MMAAKTGKIGIFQHIIRREIADA 252 (260)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHhCCCcc
Confidence 99999999999999999998754
No 54
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.96 E-value=1.9e-32 Score=312.16 Aligned_cols=299 Identities=15% Similarity=0.121 Sum_probs=203.1
Q ss_pred cCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH-hChHHHHHHHHHCCCCCCccCCCCchHHhHHHhcCcHHHHHHHHhC
Q psy13737 1000 LGNVDIVMLLLQHGAAVDSTTKDLYTALHIAAK-EGQEEVAAVLLENGASLTSTTKKGFTPLHLTGKYGHIKVAKLLLQK 1078 (1388)
Q Consensus 1000 ~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~~~~~Ll~~g~~~~~~~~~g~tpL~~A~~~~~~~~~~~Ll~~ 1078 (1388)
.+..+.+..++....+++. ..+.+++++|.. .++.+++++|++.|++ ++||||+|+..|+.+++++|++.
T Consensus 44 ~~~~~~~~~~~~~~~~~~~--~~~ll~~~~a~~~~~~~~~~~~l~~~g~~-------~~T~Lh~Aa~~G~~e~v~~Ll~~ 114 (376)
T 2aja_A 44 LSYKEAIHIFLPGTKNMEQ--VRQLLCLYYAHYNRNAKQLWSDAHKKGIK-------SEVICFVAAITGCSSALDTLCLL 114 (376)
T ss_dssp SCHHHHHHHCCCCSSHHHH--HHHHHHHHHHHTTTTCTTHHHHHHHHTCC-------HHHHHHHHHHHCCHHHHHHHTTC
T ss_pred ccHHHHHHHHhcCCCCHHH--HHHHHHHHHHHhcCCCHHHHHHHHHcCCC-------cCCHHHHHHHcCCHHHHHHHHHc
Confidence 3445555555544333321 124466777765 4667778888877654 34888888888888888888888
Q ss_pred CCCC---CCCCCCCCcHHHHHhhcCcHHHHHHHHHcCCChHHHHHHHhcCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHH
Q psy13737 1079 DAPV---DFQGKNGVTPLHVASHYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLL 1155 (1388)
Q Consensus 1079 ~~~~---~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~l~~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 1155 (1388)
|++. +..+..|.||||+|+..|+.+++++|++.|++..... ++..+ .||||+|+..|+.++|++|+
T Consensus 115 ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~--------i~~~~---~TpLh~Aa~~G~~eiv~~Ll 183 (376)
T 2aja_A 115 LTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAM--------IQAEN---YHAFRLAAENGHLHVLNRLC 183 (376)
T ss_dssp --CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHH--------HSHHH---HHHHHHHHHTTCHHHHHHHH
T ss_pred CCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccc--------cCCCC---CCHHHHHHHCCCHHHHHHHH
Confidence 7632 2345567788888888888888888877765432211 11222 79999999999999999999
Q ss_pred hCCCCccc--cccCCCcHHHHHH-hcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCcccCCC
Q psy13737 1156 EHGADVSH--AAKNGLTPLHLCA-QEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKN 1232 (1388)
Q Consensus 1156 ~~g~d~~~--~~~~g~t~Lh~A~-~~~~~~~~~~Ll~~g~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~ 1232 (1388)
++|++++. .|..|.||||+|+ ..|+.+++++|++.|+ .|.||||+|+..|+.+++++|+++|++++.
T Consensus 184 ~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga-------~~~taL~~Aa~~g~~evv~lL~~~ga~~~~--- 253 (376)
T 2aja_A 184 ELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV-------MLAYAEIHEFEYGEKYVNPFIARHVNRLKE--- 253 (376)
T ss_dssp HSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH-------HHHHHHHCTTTTTTTTHHHHHHHHHHHHHH---
T ss_pred HcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC-------ccchHHHHHHHCCCHHHHHHHHhcCccccc---
Confidence 99999987 8899999999999 9999999999999874 388999999999999999999999887653
Q ss_pred CCCCCcchhhhccccccccccCCCCCCChHHHHHHcCCHH------------HHHHHHHcCCCCCCCCCCCcHHHHHHhc
Q psy13737 1233 FPSRPIGILFILFPFIIGYTNTTDQGFTPLHHSAQQGHST------------IVALLLDRGASPNATNKGFTPLHHSAQQ 1300 (1388)
Q Consensus 1233 ~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~------------~v~~Ll~~g~~~~~~~~g~tpL~~A~~~ 1300 (1388)
..++++.|+..|+.+ +++.|+.++. .
T Consensus 254 -------------------------~~~~l~~A~~~g~~~vv~~~~~~~~~~~~~~li~~~~-----------------~ 291 (376)
T 2aja_A 254 -------------------------MHDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRND-----------------E 291 (376)
T ss_dssp -------------------------HHTTTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCC-----------------G
T ss_pred -------------------------ccHHHHHHHHCCChhhhcHHhhhhhHHHHHHHHHcch-----------------h
Confidence 124666777777655 3455565542 1
Q ss_pred CcHHHHHHHHHc---------CCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHhCcHH
Q psy13737 1301 GHSTIVALLLDR---------GASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHST 1371 (1388)
Q Consensus 1301 g~~~iv~~Ll~~---------g~~~~~~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~ga~~~~~d~~G~tpL~~A~~~g~~~ 1371 (1388)
+..+.+++|++. |++++ .+.||||+|+..|+.++|++|++.| ..++..|.||+.+|-++|+.+
T Consensus 292 ~~~~~~~~Ll~~~~vk~l~~~g~~~n-----~~~~~L~~A~~~g~~e~v~lLl~~~---~v~~~~~~~~~~~~~~~~~~~ 363 (376)
T 2aja_A 292 VLLDDIRFLLSIPGIKALAPTATIPG-----DANELLRLALRLGNQGACALLLSIP---SVLALTKANNYYINETGGRLD 363 (376)
T ss_dssp GGHHHHHHHHTSTTTGGGSSCCSSTT-----CCCHHHHHHHHHTCTTHHHHHTTSH---HHHHSCC--------------
T ss_pred hHHHHHHHHHhChhhhhhhccCCCCC-----CccHHHHHHHHcCcHHHHHHHHcCh---HHHHHHHHhcccccccccccc
Confidence 235667777753 44432 4679999999999999999999976 457889999999999999999
Q ss_pred HHHHHHH
Q psy13737 1372 IVALLLD 1378 (1388)
Q Consensus 1372 ~v~~Ll~ 1378 (1388)
++++-+.
T Consensus 364 ~~~~~~~ 370 (376)
T 2aja_A 364 LRAVALE 370 (376)
T ss_dssp -------
T ss_pred HHHHHHH
Confidence 9876554
No 55
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.96 E-value=2.2e-29 Score=278.70 Aligned_cols=188 Identities=25% Similarity=0.320 Sum_probs=157.1
Q ss_pred CCcHHHHHHhcCcHHHHHHHHhCCCC--CCCCCCCCCcHHHHHHHhCCHHHHHHHHhCCC-CcccCCCCCCCCcchhhhc
Q psy13737 1168 GLTPLHLCAQEDRVGVAELLLKNNAQ--VDTPTKKGFTPLHIACHYGQISMARLLLDQSA-NVTVPKNFPSRPIGILFIL 1244 (1388)
Q Consensus 1168 g~t~Lh~A~~~~~~~~~~~Ll~~g~~--~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~~~~~~ 1244 (1388)
+++++|.|+..++.+.++.+++.+.+ +|.+|..|+||||+|+..|+.+++++|++.|+ +++.
T Consensus 76 ~~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~--------------- 140 (276)
T 4hbd_A 76 CRSDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDK--------------- 140 (276)
T ss_dssp HSTTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTC---------------
T ss_pred hccCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCC---------------
Confidence 34566667777777777777665554 67777777777777777777777777777776 5543
Q ss_pred cccccccccCCCCCCChHHHHH-----HcCCHHHHHHHHHcCCCCCC-CCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCC
Q psy13737 1245 FPFIIGYTNTTDQGFTPLHHSA-----QQGHSTIVALLLDRGASPNA-TNKGFTPLHHSAQQGHSTIVALLLDRGASPNA 1318 (1388)
Q Consensus 1245 ~~~~~~~~~~~~~g~t~L~~Aa-----~~g~~~~v~~Ll~~g~~~~~-~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~~~~ 1318 (1388)
.+..|+||||+|+ ..++.+++++|++.|++++. +..|+||||+|+..|+.++|++|+++|++++.
T Consensus 141 ---------~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~ 211 (276)
T 4hbd_A 141 ---------QNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNV 211 (276)
T ss_dssp ---------CCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred ---------CCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCC
Confidence 5667778888777 56788899999999988876 45699999999999999999999999999998
Q ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHHCC
Q psy13737 1319 TNKTRGFTPLHIACHYGQISMARLLLD-QSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRG 1380 (1388)
Q Consensus 1319 ~~~~~g~T~Lh~A~~~~~~~~v~~Ll~-~ga~~~~~d~~G~tpL~~A~~~g~~~~v~~Ll~~g 1380 (1388)
++. .|+||||+|+..|+.++|++|++ .|++++.+|.+|+||||+|++.|+.+++++|++++
T Consensus 212 ~d~-~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 212 QDD-DGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp CCT-TSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred CCC-CCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 875 79999999999999999999999 89999999999999999999999999999999875
No 56
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.96 E-value=1.7e-29 Score=278.83 Aligned_cols=181 Identities=23% Similarity=0.286 Sum_probs=136.8
Q ss_pred CCCCcHHHHHh---hcCcHHHHHHHHHcCCChHHHHHHHhcCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCccc
Q psy13737 1087 KNGVTPLHVAS---HYDHQNVALLLLEKGASMDIATTLLEYGAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSH 1163 (1388)
Q Consensus 1087 ~~g~t~L~~A~---~~~~~~~~~~ll~~~~~~~~~~~l~~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~~~ 1163 (1388)
..|+||||+|+ ..++.+++++|++.+++......++ ....+..+..|.||||+|+..|+.+++++|+++|++++.
T Consensus 44 ~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~--~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~ 121 (260)
T 3jxi_A 44 STGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFI--NSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHA 121 (260)
T ss_dssp TTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHH--TCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhh--cccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCc
Confidence 33444444444 3344444444444332221111111 234456677899999999999999999999999999999
Q ss_pred cc--------------cCCCcHHHHHHhcCcHHHHHHHHh---CCCCCCCCCCCCCcHHHHHHHhCC---------HHHH
Q psy13737 1164 AA--------------KNGLTPLHLCAQEDRVGVAELLLK---NNAQVDTPTKKGFTPLHIACHYGQ---------ISMA 1217 (1388)
Q Consensus 1164 ~~--------------~~g~t~Lh~A~~~~~~~~~~~Ll~---~g~~~~~~~~~g~tpL~~A~~~g~---------~~~v 1217 (1388)
.+ ..|+||||+|+..|+.+++++|++ .|++++.+|..|+||||+|+..++ .+++
T Consensus 122 ~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v 201 (260)
T 3jxi_A 122 QARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMY 201 (260)
T ss_dssp CCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHH
T ss_pred cccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHH
Confidence 98 589999999999999999999999 999999999999999999999888 7899
Q ss_pred HHHHhCCCCcccCCCCCCCCcchhhhccccccccccCCCCCCChHHHHHHcCCHHHHHHHHHcCCCCCC
Q psy13737 1218 RLLLDQSANVTVPKNFPSRPIGILFILFPFIIGYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNA 1286 (1388)
Q Consensus 1218 ~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~ 1286 (1388)
++|+++|++++..... .+..+..|+||||+|+..|+.++|++|+++|+++..
T Consensus 202 ~~Ll~~ga~~~~~~~~-----------------~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~ 253 (260)
T 3jxi_A 202 DLLLIKCAKLFPDTNL-----------------EALLNNDGLSPLMMAAKTGKIGIFQHIIRREIADAA 253 (260)
T ss_dssp HHHHHHHHHHCTTCCG-----------------GGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHHHC
T ss_pred HHHHHhCcccccccch-----------------hhcccCCCCCHHHHHHHcCCHHHHHHHHHhCCCccc
Confidence 9999998877421100 012677888888888888888888888888776543
No 57
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.95 E-value=3.1e-28 Score=254.28 Aligned_cols=162 Identities=26% Similarity=0.359 Sum_probs=139.3
Q ss_pred CCCCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCcccCCCCCCCCcchhhhccccccccccCCCCCCChHHHHHHcCCHHH
Q psy13737 1194 VDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRPIGILFILFPFIIGYTNTTDQGFTPLHHSAQQGHSTI 1273 (1388)
Q Consensus 1194 ~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~ 1273 (1388)
++.+|..|+||||+|+..|+.+++++|++.|++++. .+..|+||||+|+..|+.++
T Consensus 28 ~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~------------------------~~~~g~t~L~~A~~~~~~~~ 83 (192)
T 2rfm_A 28 RNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLED------------------------KDIEGSTALIWAVKNNRLGI 83 (192)
T ss_dssp HTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTC------------------------CCTTSCCHHHHHHHTTCHHH
T ss_pred HhCcCCCCCCHHHHHHHcCCHHHHHHHHHhcccccc------------------------ccccCccHHHHHHHcCCHHH
Confidence 356777788888888888888888888887776654 56678888888888888888
Q ss_pred HHHHHHcCCCCCC-CCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy13737 1274 VALLLDRGASPNA-TNKGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSC 1352 (1388)
Q Consensus 1274 v~~Ll~~g~~~~~-~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~ga~~~~ 1352 (1388)
+++|++.|++++. +..|+||||+|+..|+.+++++|+++|++++..+. .|+||||+|+..|+.+++++|+++|++++.
T Consensus 84 v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 162 (192)
T 2rfm_A 84 AEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNL-EGETPLIVASKYGRSEIVKKLLELGADISA 162 (192)
T ss_dssp HHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCT-TCCCHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCC
Confidence 8888888888876 45689999999999999999999999999887764 799999999999999999999999999999
Q ss_pred CCCCCCcHHHHHHHhCcHHHHHHHHHCC
Q psy13737 1353 TTDQGFTPLHHSAQQGHSTIVALLLDRG 1380 (1388)
Q Consensus 1353 ~d~~G~tpL~~A~~~g~~~~v~~Ll~~g 1380 (1388)
+|..|+||||+|++.|+.+++++|+++|
T Consensus 163 ~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 163 RDLTGLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp BCTTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence 9999999999999999999999999875
No 58
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.95 E-value=2.6e-28 Score=270.05 Aligned_cols=188 Identities=24% Similarity=0.320 Sum_probs=174.9
Q ss_pred CCcHHHHHHhcCCHHHHHHHHhCCCC--ccccccCCCcHHHHHHhcCcHHHHHHHHhCCC-CCCCCCCCCCcHHHHHH--
Q psy13737 1135 GFTPLHLSASEGHADMSAMLLEHGAD--VSHAAKNGLTPLHLCAQEDRVGVAELLLKNNA-QVDTPTKKGFTPLHIAC-- 1209 (1388)
Q Consensus 1135 g~t~L~~A~~~~~~~~v~~Ll~~g~d--~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~-~~~~~~~~g~tpL~~A~-- 1209 (1388)
+++++|.|+..++.+.++.+++.+.+ ++..|..|+||||+|+..|+.+++++|++.|+ +++..+..|+||||+|+
T Consensus 76 ~~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~ 155 (276)
T 4hbd_A 76 CRSDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALA 155 (276)
T ss_dssp HSTTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGC
T ss_pred hccCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHH
Confidence 46789999999999999999988776 88999999999999999999999999999998 99999999999999999
Q ss_pred ---HhCCHHHHHHHHhCCCCcccCCCCCCCCcchhhhccccccccccCCCCCCChHHHHHHcCCHHHHHHHHHcCCCCCC
Q psy13737 1210 ---HYGQISMARLLLDQSANVTVPKNFPSRPIGILFILFPFIIGYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNA 1286 (1388)
Q Consensus 1210 ---~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~ 1286 (1388)
..++.+++++|++.|.+.+. .+..|+||||+|+..|+.++|++|++.|++++.
T Consensus 156 ~~~~~~~~~~v~~Ll~~g~~~~~------------------------~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~ 211 (276)
T 4hbd_A 156 TLKTQDDIETVLQLFRLGNINAK------------------------ASQAGQTALMLAVSHGRVDVVKALLACEADVNV 211 (276)
T ss_dssp CCCSHHHHHHHHHHHHHSCTTCC------------------------CTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HhhhhhhHHHHHHHHHcCCCccc------------------------cCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCC
Confidence 67899999999999976653 567899999999999999999999999999997
Q ss_pred -CCCCCcHHHHHHhcCcHHHHHHHHH-cCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy13737 1287 -TNKGFTPLHHSAQQGHSTIVALLLD-RGASPNATNKTRGFTPLHIACHYGQISMARLLLDQS 1347 (1388)
Q Consensus 1287 -~~~g~tpL~~A~~~g~~~iv~~Ll~-~g~~~~~~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~g 1347 (1388)
+..|+||||+|+..|+.++|++|++ .|++++..+. .|+||||+|+..|+.+++++|++++
T Consensus 212 ~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~-~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 212 QDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDR-DGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCT-TSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred CCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCC-CCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 6689999999999999999999999 8999998875 7999999999999999999999864
No 59
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.95 E-value=1.1e-27 Score=242.43 Aligned_cols=157 Identities=27% Similarity=0.396 Sum_probs=145.7
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHhCCCCcccCCCCCCCCcchhhhccccccccccCCCCCCChHHHHHHcCCHHHHHHHHH
Q psy13737 1200 KGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRPIGILFILFPFIIGYTNTTDQGFTPLHHSAQQGHSTIVALLLD 1279 (1388)
Q Consensus 1200 ~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~ 1279 (1388)
...||||.|+..|+.+++++|++.|++++. .+..|+||||+|+. |+.+++++|++
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~------------------------~~~~g~t~L~~A~~-~~~~~v~~Ll~ 58 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNVNVNA------------------------QNGFGRTALQVMKL-GNPEIARRLLL 58 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCCCTTC------------------------CCTTSCCHHHHCCS-SCHHHHHHHHH
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCCCccc------------------------cCccCccHHHHHHc-CcHHHHHHHHH
Confidence 456999999999999999999999988765 67789999999999 99999999999
Q ss_pred cCCCCCC-CCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCC-CCCCCCCC
Q psy13737 1280 RGASPNA-TNKGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSAN-VSCTTDQG 1357 (1388)
Q Consensus 1280 ~g~~~~~-~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~ga~-~~~~d~~G 1357 (1388)
.|++++. +..|+||||+|+..|+.+++++|+++|++++..+. .|+||||+|+..|+.+++++|+++|++ ++.+|..|
T Consensus 59 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g 137 (162)
T 1ihb_A 59 RGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDN-EGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKG 137 (162)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTS
T ss_pred cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCC-CCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCC
Confidence 9999987 56799999999999999999999999999998775 799999999999999999999999998 69999999
Q ss_pred CcHHHHHHHhCcHHHHHHHHHCCCC
Q psy13737 1358 FTPLHHSAQQGHSTIVALLLDRGAS 1382 (1388)
Q Consensus 1358 ~tpL~~A~~~g~~~~v~~Ll~~ga~ 1382 (1388)
+||||+|++.|+.+++++|+++|||
T Consensus 138 ~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 138 DTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred CcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 9999999999999999999999996
No 60
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.95 E-value=2.7e-30 Score=276.02 Aligned_cols=197 Identities=23% Similarity=0.226 Sum_probs=151.1
Q ss_pred HHHHHhCCCCccccc---cCCCcHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCc
Q psy13737 1151 SAMLLEHGADVSHAA---KNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANV 1227 (1388)
Q Consensus 1151 v~~Ll~~g~d~~~~~---~~g~t~Lh~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~ 1227 (1388)
++.|++.|++++..+ ..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|++.|+++
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~ 80 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANV 80 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 356677777766443 34567788888888888888888888888888888888888888888888888888888877
Q ss_pred ccCCCCCCCCcchhhhccccccccccCCCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCC--CCCCcHHHHH--HhcCcH
Q psy13737 1228 TVPKNFPSRPIGILFILFPFIIGYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNAT--NKGFTPLHHS--AQQGHS 1303 (1388)
Q Consensus 1228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~--~~g~tpL~~A--~~~g~~ 1303 (1388)
+. .|..|+||||+|+..|+.+++++|++.|++++.. ..|+||||+| +..|+.
T Consensus 81 n~------------------------~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~ 136 (229)
T 2vge_A 81 NS------------------------PDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYA 136 (229)
T ss_dssp TC------------------------CCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHH
T ss_pred CC------------------------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChH
Confidence 65 5667888888888888888888888888888863 3788999988 888889
Q ss_pred HHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCC--CCCCCCCCCcHHHHHHHhCcHHHHHH
Q psy13737 1304 TIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSAN--VSCTTDQGFTPLHHSAQQGHSTIVAL 1375 (1388)
Q Consensus 1304 ~iv~~Ll~~g~~~~~~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~ga~--~~~~d~~G~tpL~~A~~~g~~~~v~~ 1375 (1388)
+++++|++.|++++..+. .|.||||.++... .+++|++.|++ ++.+|.+|+||||+|+++|+.++|+-
T Consensus 137 ~~v~~Ll~~ga~~~~~~~-~~~~~l~~~~~~~---~~~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~~~v~~ 206 (229)
T 2vge_A 137 DCATYLADVEQSMGLMNS-GAVYALWDYSAEF---GDELSFREGESVTVLRRDGPEETDWWWAALHGQEGYVPR 206 (229)
T ss_dssp HHHHHHHHHHHHTTTSGG-GEEEESSCBCCSS---TTBCCBCTTCEEEEEESSCTTCSSEEEEEETTEEEEEEG
T ss_pred HHHHHHHHcCCCcccccC-CchHHHHHHhhcc---ccccCccccccccccccCCCcccHHHHHHHcCCcceeeh
Confidence 999999999988887764 6888888655443 33678888888 67788899999999999999888754
No 61
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.95 E-value=1.6e-27 Score=242.61 Aligned_cols=160 Identities=24% Similarity=0.380 Sum_probs=150.3
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHhCCCCcccCCCCCCCCcchhhhccccccccccCCCCCCChHHHHHHcCCHHHHHHHHH
Q psy13737 1200 KGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRPIGILFILFPFIIGYTNTTDQGFTPLHHSAQQGHSTIVALLLD 1279 (1388)
Q Consensus 1200 ~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~ 1279 (1388)
.|.||||.|+..|+.+++++|++.+++++. .+..|+||||+|+..|+.+++++|++
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~------------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~ 57 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINH------------------------TDEEGFTPLMWAAAHGQIAVVEFLLQ 57 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTC------------------------CCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCC------------------------CCCCCCCHHHHHHHCCCHHHHHHHHH
Confidence 588999999999999999999999987764 67789999999999999999999999
Q ss_pred cCCCCCC-CCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCC
Q psy13737 1280 RGASPNA-TNKGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGF 1358 (1388)
Q Consensus 1280 ~g~~~~~-~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~ga~~~~~d~~G~ 1358 (1388)
.|++++. +..|+||||+|+..|+.+++++|+++|++++..+. .|+||||+|+..|+.+++++|+++|++++.+|..|+
T Consensus 58 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~ 136 (167)
T 3v31_A 58 NGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDW-NGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGY 136 (167)
T ss_dssp TTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred cCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCC
Confidence 9999986 66799999999999999999999999999998774 799999999999999999999999999999999999
Q ss_pred cHHHHHHHhCcHHHHHHHHHCCCCCC
Q psy13737 1359 TPLHHSAQQGHSTIVALLLDRGASPN 1384 (1388)
Q Consensus 1359 tpL~~A~~~g~~~~v~~Ll~~ga~~~ 1384 (1388)
||||+|++.|+.+++++|++++++..
T Consensus 137 t~l~~A~~~~~~~~~~~L~~~~~~~~ 162 (167)
T 3v31_A 137 NSMDLAVALGYRSVQQVIESHLLKLL 162 (167)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 99999999999999999999887643
No 62
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.95 E-value=3.4e-27 Score=240.17 Aligned_cols=158 Identities=34% Similarity=0.521 Sum_probs=131.8
Q ss_pred CCCCCcHHHHHHHhCCHHHHHHHHhCCCCcccCCCCCCCCcchhhhccccccccccCCCCCCChHHHHHHcCCHHHHHHH
Q psy13737 1198 TKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRPIGILFILFPFIIGYTNTTDQGFTPLHHSAQQGHSTIVALL 1277 (1388)
Q Consensus 1198 ~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~L 1277 (1388)
...+.|||++|++.|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~------------------------~~~~g~t~L~~A~~~~~~~~v~~L 66 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILMANGADVNA------------------------EDASGWTPLHLAAFNGHLEIVEVL 66 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHHHTTCCTTC------------------------CCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred CCcccchHHHHHHcCCHHHHHHHHHCCCCCCC------------------------CCCCCCCHHHHHHHcCCHHHHHHH
Confidence 34556788888888888888888887777654 566778888888888888888888
Q ss_pred HHcCCCCCC-CCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCC
Q psy13737 1278 LDRGASPNA-TNKGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQ 1356 (1388)
Q Consensus 1278 l~~g~~~~~-~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~ga~~~~~d~~ 1356 (1388)
++.|++++. +..|+||||+|+..|+.+++++|+++|++++..+. .|+||||+|+..|+.+++++|+++|++++.+|..
T Consensus 67 l~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~ 145 (169)
T 2y1l_E 67 LKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDM-EGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKF 145 (169)
T ss_dssp HHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred HHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC
Confidence 888888776 45688888888888899999999999988887764 6999999999999999999999999999999999
Q ss_pred CCcHHHHHHHhCcHHHHHHHHHCC
Q psy13737 1357 GFTPLHHSAQQGHSTIVALLLDRG 1380 (1388)
Q Consensus 1357 G~tpL~~A~~~g~~~~v~~Ll~~g 1380 (1388)
|+||||+|+++|+.+++++|++.|
T Consensus 146 g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 146 GKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred CCCHHHHHHHhCCHHHHHHHHHcC
Confidence 999999999999999999999887
No 63
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.95 E-value=1.9e-27 Score=243.31 Aligned_cols=162 Identities=25% Similarity=0.375 Sum_probs=149.2
Q ss_pred CCcHHHHHHHhCCHHHHHHHHhCCCC-cccCCCCCCCCcchhhhccccccccccCCCCCCChHHHHHHcCCHHHHHHHHH
Q psy13737 1201 GFTPLHIACHYGQISMARLLLDQSAN-VTVPKNFPSRPIGILFILFPFIIGYTNTTDQGFTPLHHSAQQGHSTIVALLLD 1279 (1388)
Q Consensus 1201 g~tpL~~A~~~g~~~~v~~Ll~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~ 1279 (1388)
+.||||.|+..|+.++++.|++.+.+ ++. .+..|+||||+|+..|+.++|++|++
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~------------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~ 57 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNK------------------------PDERGFTPLIWASAFGEIETVRFLLE 57 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGC------------------------CCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccC------------------------CCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 46899999999999999999998875 332 67889999999999999999999999
Q ss_pred cCCCCCC-CCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCC
Q psy13737 1280 RGASPNA-TNKGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGF 1358 (1388)
Q Consensus 1280 ~g~~~~~-~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~ga~~~~~d~~G~ 1358 (1388)
.|++++. +..|+||||+|+..|+.+++++|+++|++++..+. .|+||||+|+..|+.+++++|+++|++++.+|..|+
T Consensus 58 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~ 136 (172)
T 3v30_A 58 WGADPHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDW-NGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGY 136 (172)
T ss_dssp HTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred cCCCchhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCC
Confidence 9999987 56799999999999999999999999999998774 799999999999999999999999999999999999
Q ss_pred cHHHHHHHhCcHHHHHHHHHCCCCCCCCC
Q psy13737 1359 TPLHHSAQQGHSTIVALLLDRGASPNATN 1387 (1388)
Q Consensus 1359 tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~ 1387 (1388)
||||+|++.|+.+++++|+++|+++...|
T Consensus 137 t~l~~A~~~~~~~~~~~L~~~~~~~~~~~ 165 (172)
T 3v30_A 137 TPMDLAVALGYRKVQQVIENHILKLFQSN 165 (172)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHHHHHSCC-
T ss_pred CHHHHHHHhCcHHHHHHHHHHHHHHhccc
Confidence 99999999999999999999999877655
No 64
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.95 E-value=2e-27 Score=243.11 Aligned_cols=166 Identities=26% Similarity=0.406 Sum_probs=89.2
Q ss_pred cHHHHHHhcCcHHHHHHHHhCCCC-CCCCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCcccCCCCCCCCcchhhhccccc
Q psy13737 1170 TPLHLCAQEDRVGVAELLLKNNAQ-VDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRPIGILFILFPFI 1248 (1388)
Q Consensus 1170 t~Lh~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1248 (1388)
||||.|+..|+.++++.|++.+.+ ++.+|..|+||||+|+..|+.+++++|+++|++++.
T Consensus 4 ~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------------------- 64 (172)
T 3v30_A 4 LSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHI------------------- 64 (172)
T ss_dssp CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTC-------------------
T ss_pred hhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchh-------------------
Confidence 444444444444444444444443 444444555555555555555555555555544432
Q ss_pred cccccCCCCCCChHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCCCCcH
Q psy13737 1249 IGYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNA-TNKGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTP 1327 (1388)
Q Consensus 1249 ~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~-~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~T~ 1327 (1388)
.+..|+||||+|+..|+.+++++|+++|++++. +..|+||||+|+..|+.++|++|+++|++++..+. .|+||
T Consensus 65 -----~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~-~g~t~ 138 (172)
T 3v30_A 65 -----LAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEAD-SGYTP 138 (172)
T ss_dssp -----CCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCH
T ss_pred -----hcccCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCC-CCCCH
Confidence 334455555555555555555555555555554 33466666666666666666666666666665543 56666
Q ss_pred HHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcH
Q psy13737 1328 LHIACHYGQISMARLLLDQSANVSCTTDQGFTP 1360 (1388)
Q Consensus 1328 Lh~A~~~~~~~~v~~Ll~~ga~~~~~d~~G~tp 1360 (1388)
||+|+..|+.+++++|+++|+++..++..|.||
T Consensus 139 l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~~p 171 (172)
T 3v30_A 139 MDLAVALGYRKVQQVIENHILKLFQSNLVPADP 171 (172)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHSCC-------
T ss_pred HHHHHHhCcHHHHHHHHHHHHHHhcccCCCCCC
Confidence 666666666666666666666666666666665
No 65
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.95 E-value=6.2e-30 Score=291.44 Aligned_cols=194 Identities=11% Similarity=0.075 Sum_probs=152.0
Q ss_pred cccccccc-cCCHHHHHHHHhCCCCCCcCCCCCCCCCCCCcccHHHHHHHcCCHHHHHHHHHCCCCC---CCCCCCCChH
Q psy13737 148 TPLHLTGK-YGHIKVAKLLLQKDAPVDFQGKAPVDDVTVDYLTALHVAAHCGHARVAKTLLDKKADP---NARALNGFTP 223 (1388)
Q Consensus 148 ~~l~~A~~-~G~~~iv~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~Aa~~g~~~~v~~Ll~~g~~~---~~~~~~g~t~ 223 (1388)
+++++|+. .++.+++++|++++.+ +.||||+||..|+.++|++|+++|.+. +..+..|.||
T Consensus 67 l~~~~a~~~~~~~~~~~~l~~~g~~---------------~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tp 131 (376)
T 2aja_A 67 LCLYYAHYNRNAKQLWSDAHKKGIK---------------SEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQA 131 (376)
T ss_dssp HHHHHHHTTTTCTTHHHHHHHHTCC---------------HHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHH
T ss_pred HHHHHHHhcCCCHHHHHHHHHcCCC---------------cCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCH
Confidence 34666655 5788899999988642 348999999999999999999998732 2233457789
Q ss_pred HHHHHHcCCHHHHHHHHhCCCCc---cccccCCCchHHHHHHhCCHHHHHHHHHcCCCccc--ccCCCCCHHHHHH-HhC
Q psy13737 224 LHIACKKNRIKVVELLLKHGASI---EATTEVREPMLHIACKKNRIKVVELLLKHGASIEA--TTEVREPMLHIAC-KKN 297 (1388)
Q Consensus 224 l~~A~~~g~~~iv~~Ll~~g~~~---~~~~~~~~~~l~~A~~~g~~~iv~~L~~~~~~~~~--~~~~~~~~l~~A~-~~g 297 (1388)
||+||..|+.++|++|+++|+++ +..+.. .||||+|+..|+.++|++|+++|++++. .+..|.||||+|+ ..|
T Consensus 132 L~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G 210 (376)
T 2aja_A 132 FRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRG 210 (376)
T ss_dssp HHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCC
Confidence 99999999999999999999752 222233 7999999999999999999999998776 7777889999999 999
Q ss_pred cHHHHHHHHhCCCCccCcCCCCCCHHHHHHHhCCHHHHHHHHhCCCCcccccCCCCChHHHHHHcCcHHHH
Q psy13737 298 RIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVV 368 (1388)
Q Consensus 298 ~~~iv~~Ll~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~A~~~~~~~iv 368 (1388)
+.++|++|+++|++ +.|||+.|+..|+.+++++|+++|++++..+. +++.|+.+|+.+++
T Consensus 211 ~~eiv~~Ll~~ga~-------~~taL~~Aa~~g~~evv~lL~~~ga~~~~~~~----~l~~A~~~g~~~vv 270 (376)
T 2aja_A 211 HHNVINFLLDCPVM-------LAYAEIHEFEYGEKYVNPFIARHVNRLKEMHD----AFKLSNPDGVFDLV 270 (376)
T ss_dssp CHHHHHHHTTSHHH-------HHHHHHCTTTTTTTTHHHHHHHHHHHHHHHHT----TTTTTSSSSCCCCS
T ss_pred CHHHHHHHHhCCCc-------cchHHHHHHHCCCHHHHHHHHhcCcccccccH----HHHHHHHCCChhhh
Confidence 99999999987642 67889999999999999999988877765543 56777777776643
No 66
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.95 E-value=3.9e-27 Score=245.89 Aligned_cols=160 Identities=28% Similarity=0.368 Sum_probs=99.5
Q ss_pred CCCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCccccccCCCcHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHH
Q psy13737 1129 NAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIA 1208 (1388)
Q Consensus 1129 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~tpL~~A 1208 (1388)
|.+|..|.||||+|+..|+.+++++|++.|++++..+..|+||||+|+..++.+++++|++.|++++.+|..|+||||+|
T Consensus 29 n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 108 (192)
T 2rfm_A 29 NYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWS 108 (192)
T ss_dssp TCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHH
T ss_pred hCcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHH
Confidence 45566666666666666666666666666666666666666666666666666666666666666666666666666666
Q ss_pred HHhCCHHHHHHHHhCCCCcccCCCCCCCCcchhhhccccccccccCCCCCCChHHHHHHcCCHHHHHHHHHcCCCCCC-C
Q psy13737 1209 CHYGQISMARLLLDQSANVTVPKNFPSRPIGILFILFPFIIGYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNA-T 1287 (1388)
Q Consensus 1209 ~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~-~ 1287 (1388)
+..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|+++|++++. +
T Consensus 109 ~~~~~~~~v~~Ll~~g~~~~~------------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~ 164 (192)
T 2rfm_A 109 IIFGYSEMSYFLLEHGANVND------------------------RNLEGETPLIVASKYGRSEIVKKLLELGADISARD 164 (192)
T ss_dssp HHHTCHHHHHHHHHTTCCSSC------------------------CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBC
T ss_pred HHcCCHHHHHHHHHCCCCCCC------------------------CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcC
Confidence 666666666666666665543 444555666666665555555555555555554 3
Q ss_pred CCCCcHHHHHHhcCcHHHHHHHHHc
Q psy13737 1288 NKGFTPLHHSAQQGHSTIVALLLDR 1312 (1388)
Q Consensus 1288 ~~g~tpL~~A~~~g~~~iv~~Ll~~ 1312 (1388)
..|+||||+|+..|+.+++++|++.
T Consensus 165 ~~g~t~l~~A~~~~~~~~v~~Ll~~ 189 (192)
T 2rfm_A 165 LTGLTAEASARIFGRQEVIKIFTEV 189 (192)
T ss_dssp TTSCBHHHHHHHTTCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHhCcHHHHHHHHhc
Confidence 3455555555555555555555554
No 67
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.95 E-value=3.8e-27 Score=242.63 Aligned_cols=164 Identities=32% Similarity=0.467 Sum_probs=149.7
Q ss_pred CCCCcHHHHHHHhCCHHHHHHHHhCC-CCcccCCCCCCCCcchhhhccccccccccCCCCCCChHHHHHHcCCHHHHHHH
Q psy13737 1199 KKGFTPLHIACHYGQISMARLLLDQS-ANVTVPKNFPSRPIGILFILFPFIIGYTNTTDQGFTPLHHSAQQGHSTIVALL 1277 (1388)
Q Consensus 1199 ~~g~tpL~~A~~~g~~~~v~~Ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~L 1277 (1388)
..+.|||+.||..|+.++++.|++.+ .+++. .+..|+||||+|+..|+.+++++|
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~------------------------~~~~g~t~L~~A~~~~~~~~v~~L 58 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQ------------------------GDDHGFSPLHWACREGRSAVVEML 58 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTC------------------------CCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccc------------------------cCCCCCCHHHHHHHcCcHHHHHHH
Confidence 46789999999999999999999984 44443 677899999999999999999999
Q ss_pred HHcCCCCCC-CCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCC
Q psy13737 1278 LDRGASPNA-TNKGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQ 1356 (1388)
Q Consensus 1278 l~~g~~~~~-~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~ga~~~~~d~~ 1356 (1388)
++.|++++. +..|+||||+|+..|+.++|++|+++|++++..+. .|+||||+|+..|+.+++++|+++|++++.+|..
T Consensus 59 l~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~-~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~ 137 (179)
T 3f6q_A 59 IMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNE-HGNVPLHYACFWGQDQVAEDLVANGALVSICNKY 137 (179)
T ss_dssp HHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTT
T ss_pred HHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccC
Confidence 999999997 56799999999999999999999999999998874 7999999999999999999999999999999999
Q ss_pred CCcHHHHHHHhCcHHHHHHHHHCCCCCCCCC
Q psy13737 1357 GFTPLHHSAQQGHSTIVALLLDRGASPNATN 1387 (1388)
Q Consensus 1357 G~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~ 1387 (1388)
|+|||++|++.++.+++++|+++|++++..+
T Consensus 138 g~tpl~~A~~~~~~~~~~~L~~~g~~~~~~~ 168 (179)
T 3f6q_A 138 GEMPVDKAKAPLRELLRERAEKMGQNLNRIP 168 (179)
T ss_dssp SCCGGGGSCHHHHHHHHHHHHHTTCCCSCBC
T ss_pred CCCcHHHHHHHHHHHHHHHHHHhhcCcccCC
Confidence 9999999999999999999999999998754
No 68
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.94 E-value=8.2e-27 Score=236.09 Aligned_cols=156 Identities=29% Similarity=0.382 Sum_probs=93.5
Q ss_pred CCcHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCcccCCCCCCCCcchhhhcccc
Q psy13737 1168 GLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRPIGILFILFPF 1247 (1388)
Q Consensus 1168 g~t~Lh~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~ 1247 (1388)
..||||.|+..|+.+++++|++.|++++.++..|+||||+|+. |+.+++++|+++|++++.
T Consensus 5 ~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~------------------ 65 (162)
T 1ihb_A 5 WGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDL------------------ 65 (162)
T ss_dssp CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTC------------------
T ss_pred HhhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCC------------------
Confidence 3455555555555555555555555555555556666666555 566666666665555443
Q ss_pred ccccccCCCCCCChHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCcHHHHHHhcCcHHHHHHHHHcCCCC-CCCCCCCCC
Q psy13737 1248 IIGYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNA-TNKGFTPLHHSAQQGHSTIVALLLDRGASP-NATNKTRGF 1325 (1388)
Q Consensus 1248 ~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~-~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~~-~~~~~~~g~ 1325 (1388)
.+..|+||||+|+..|+.+++++|++.|++++. +..|+||||+|+..|+.+++++|+++|+++ +..+ ..|+
T Consensus 66 ------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~~g~ 138 (162)
T 1ihb_A 66 ------KDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRN-HKGD 138 (162)
T ss_dssp ------CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCC-TTSC
T ss_pred ------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcC-CCCC
Confidence 344556666666666666666666666666554 345666666666666666666666666664 3333 4566
Q ss_pred cHHHHHHHcCCHHHHHHHHhCCCC
Q psy13737 1326 TPLHIACHYGQISMARLLLDQSAN 1349 (1388)
Q Consensus 1326 T~Lh~A~~~~~~~~v~~Ll~~ga~ 1349 (1388)
||||+|+..|+.+++++|+++|||
T Consensus 139 t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 139 TACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTC--
T ss_pred cHHHHHHHcCCHHHHHHHHHhCCC
Confidence 777777777777777777776664
No 69
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.94 E-value=1.4e-26 Score=231.21 Aligned_cols=150 Identities=33% Similarity=0.411 Sum_probs=141.0
Q ss_pred CCcHHHHHHHhCCHHHHHHHHhCCCCcccCCCCCCCCcchhhhccccccccccCCCCCCChHHHHHHcCCHHHHHHHHHc
Q psy13737 1201 GFTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRPIGILFILFPFIIGYTNTTDQGFTPLHHSAQQGHSTIVALLLDR 1280 (1388)
Q Consensus 1201 g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~ 1280 (1388)
+.|||+.|+..|+.+++++|++.|++++ .+..|.||||+|+..|+.+++++|++.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~-------------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 56 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPFT-------------------------TDWLGTSPLHLAAQYGHFSTTEVLLRA 56 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCCC-------------------------CCTTCCCHHHHHHHHTCHHHHHHHHTT
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCCC-------------------------cCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 4589999999999999999999988654 466799999999999999999999999
Q ss_pred CCCCCC-CCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCc
Q psy13737 1281 GASPNA-TNKGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFT 1359 (1388)
Q Consensus 1281 g~~~~~-~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~ga~~~~~d~~G~t 1359 (1388)
|++++. +..|+||||+|+..|+.+++++|+++|++++..+. .|+||||+|+..|+.+++++|+++|++++.+|..|+|
T Consensus 57 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t 135 (153)
T 1awc_B 57 GVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDM-LKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKT 135 (153)
T ss_dssp TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred CCCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCC
Confidence 999987 56799999999999999999999999999998874 7999999999999999999999999999999999999
Q ss_pred HHHHHHHhCcHHHHHHH
Q psy13737 1360 PLHHSAQQGHSTIVALL 1376 (1388)
Q Consensus 1360 pL~~A~~~g~~~~v~~L 1376 (1388)
|||+|+++|+.+++++|
T Consensus 136 ~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 136 AFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHh
Confidence 99999999999999987
No 70
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.94 E-value=6.8e-27 Score=237.28 Aligned_cols=159 Identities=30% Similarity=0.445 Sum_probs=137.6
Q ss_pred CCCCCCcHHHHHHHhCCHHHHHHHHhCCC-CcccCCCCCCCCcchhhhccccccccccCCCCCCChHHHHHHcCCHHHHH
Q psy13737 1197 PTKKGFTPLHIACHYGQISMARLLLDQSA-NVTVPKNFPSRPIGILFILFPFIIGYTNTTDQGFTPLHHSAQQGHSTIVA 1275 (1388)
Q Consensus 1197 ~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~ 1275 (1388)
.|..|.|||+.|+..|+.++++.|++.+. +++ ..+..|+||||+|+..|+.++++
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~------------------------~~~~~g~t~L~~A~~~~~~~~v~ 59 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQSVNCR------------------------DIEGRQSTPLHFAAGYNRVSVVE 59 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCC------------------------CTTTTCCCHHHHHHHTTCHHHHH
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcCCCCcc------------------------ccccCCCCHHHHHHHcChHHHHH
Confidence 45678889999999999999998887543 221 25667889999999999999999
Q ss_pred HHHHcCCCCCC-CCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCC
Q psy13737 1276 LLLDRGASPNA-TNKGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTT 1354 (1388)
Q Consensus 1276 ~Ll~~g~~~~~-~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~ga~~~~~d 1354 (1388)
+|++.|++++. +..|+||||+|+..|+.+++++|+++|++++..+. .|+||||+|+..|+.+++++|+++|++++.+|
T Consensus 60 ~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~ 138 (165)
T 3twr_A 60 YLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADL-WKFTPLHEAAAKGKYEICKLLLQHGADPTKKN 138 (165)
T ss_dssp HHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred HHHhcCCCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCCcccC
Confidence 99999999887 55799999999999999999999999999998775 79999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHhCcHHHHHHHHHCCC
Q psy13737 1355 DQGFTPLHHSAQQGHSTIVALLLDRGA 1381 (1388)
Q Consensus 1355 ~~G~tpL~~A~~~g~~~~v~~Ll~~ga 1381 (1388)
..|+||||+|++ |+.+++++|+++||
T Consensus 139 ~~g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 139 RDGNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp TTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred CCCCChhHhHhc-CChHHHHHHhhccc
Confidence 999999999877 89999999999997
No 71
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.94 E-value=3.1e-26 Score=233.11 Aligned_cols=154 Identities=35% Similarity=0.533 Sum_probs=80.8
Q ss_pred CCcHHHHHHhcCCHHHHHHHHhCCCCccccccCCCcHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHhCCH
Q psy13737 1135 GFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQI 1214 (1388)
Q Consensus 1135 g~t~L~~A~~~~~~~~v~~Ll~~g~d~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~tpL~~A~~~g~~ 1214 (1388)
+.|||+.|+..|+.+++++|+++|++++..|..|.||||+|+..++.+++++|+++|++++.+|..|+||||+|+..|+.
T Consensus 14 ~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 93 (169)
T 2y1l_E 14 LGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHL 93 (169)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred ccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCH
Confidence 44556666666666666666666655555555555555555555555555555555555555555555555555555555
Q ss_pred HHHHHHHhCCCCcccCCCCCCCCcchhhhccccccccccCCCCCCChHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCcH
Q psy13737 1215 SMARLLLDQSANVTVPKNFPSRPIGILFILFPFIIGYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNA-TNKGFTP 1293 (1388)
Q Consensus 1215 ~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~-~~~g~tp 1293 (1388)
+++++|+++|++++. .+..|+||||+|+..|+.+++++|+++|++++. +..|.||
T Consensus 94 ~~~~~Ll~~g~~~~~------------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 149 (169)
T 2y1l_E 94 EIVEVLLKNGADVNA------------------------NDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTA 149 (169)
T ss_dssp HHHHHHHHTTCCTTC------------------------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred HHHHHHHHcCCCCCC------------------------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCH
Confidence 555555555554432 333444444444444444444444444444443 2234444
Q ss_pred HHHHHhcCcHHHHHHHHHc
Q psy13737 1294 LHHSAQQGHSTIVALLLDR 1312 (1388)
Q Consensus 1294 L~~A~~~g~~~iv~~Ll~~ 1312 (1388)
||+|+..|+.+++++|++.
T Consensus 150 l~~A~~~~~~~~~~~L~~~ 168 (169)
T 2y1l_E 150 FDISIDNGNEDLAEILQKL 168 (169)
T ss_dssp HHHHHHTTCHHHHHHHHTC
T ss_pred HHHHHHhCCHHHHHHHHHc
Confidence 4444444444444444443
No 72
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.94 E-value=1.9e-26 Score=234.51 Aligned_cols=157 Identities=24% Similarity=0.380 Sum_probs=80.6
Q ss_pred CCcHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCcccCCCCCCCCcchhhhcccc
Q psy13737 1168 GLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRPIGILFILFPF 1247 (1388)
Q Consensus 1168 g~t~Lh~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~ 1247 (1388)
|.||||.|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.
T Consensus 3 ~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------------------ 64 (167)
T 3v31_A 3 NSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQL------------------ 64 (167)
T ss_dssp TCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC------------------
T ss_pred CcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCC------------------
Confidence 44444444444444444444444444444444555555555555555555555554444432
Q ss_pred ccccccCCCCCCChHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCCCCc
Q psy13737 1248 IIGYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNA-TNKGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFT 1326 (1388)
Q Consensus 1248 ~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~-~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~T 1326 (1388)
.+..|.||||+|+..|+.+++++|++.|++++. +..|+||||+|+..|+.+++++|+++|++++..+. .|+|
T Consensus 65 ------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t 137 (167)
T 3v31_A 65 ------LGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETD-SGYN 137 (167)
T ss_dssp ------CCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCC
T ss_pred ------cCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCC-CCCC
Confidence 334445555555555555555555555555543 33455555555555555555555555555554442 4555
Q ss_pred HHHHHHHcCCHHHHHHHHhCCCC
Q psy13737 1327 PLHIACHYGQISMARLLLDQSAN 1349 (1388)
Q Consensus 1327 ~Lh~A~~~~~~~~v~~Ll~~ga~ 1349 (1388)
|||+|+..|+.+++++|++++++
T Consensus 138 ~l~~A~~~~~~~~~~~L~~~~~~ 160 (167)
T 3v31_A 138 SMDLAVALGYRSVQQVIESHLLK 160 (167)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCcHHHHHHHHHHHHH
Confidence 55555555555555555555443
No 73
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.94 E-value=3.1e-29 Score=267.80 Aligned_cols=197 Identities=20% Similarity=0.236 Sum_probs=168.1
Q ss_pred HHHHhcCCCCCCCC---CCCCcHHHHHHhcCCHHHHHHHHhCCCCccccccCCCcHHHHHHhcCcHHHHHHHHhCCCCCC
Q psy13737 1119 TTLLEYGAKPNAES---VAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVD 1195 (1388)
Q Consensus 1119 ~~l~~~g~~~~~~~---~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~~~~ 1195 (1388)
+.|++.|++++..+ ..|.||||+|+..|+.+++++|++.|++++..|..|+||||+|+..|+.+++++|++.|++++
T Consensus 2 ~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n 81 (229)
T 2vge_A 2 RSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVN 81 (229)
T ss_dssp --------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred eehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence 34666777776544 456678999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCcccCCCCCCCCcchhhhccccccccccCC-CCCCChHHHH--HHcCCHH
Q psy13737 1196 TPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRPIGILFILFPFIIGYTNTT-DQGFTPLHHS--AQQGHST 1272 (1388)
Q Consensus 1196 ~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~t~L~~A--a~~g~~~ 1272 (1388)
.+|..|+||||+|+..|+.+++++|++.|++++. .+ ..|+||||+| +..|+.+
T Consensus 82 ~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~------------------------~~~~~g~tpL~~A~a~~~~~~~ 137 (229)
T 2vge_A 82 SPDSHGWTPLHCAASCNDTVICMALVQHGAAIFA------------------------TTLSDGATAFEKCDPYREGYAD 137 (229)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTC------------------------CCSSTTCCTGGGCCTTSTTHHH
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc------------------------ccCCCCCCHHHHHHHHhcChHH
Confidence 9999999999999999999999999999999875 43 5899999999 9999999
Q ss_pred HHHHHHHcCCCCCCC-CCCCcHHHHHHhcCcHHHHHHHHHcCCC--CCCCCCCCCCcHHHHHHHcCCHHHHHHH
Q psy13737 1273 IVALLLDRGASPNAT-NKGFTPLHHSAQQGHSTIVALLLDRGAS--PNATNKTRGFTPLHIACHYGQISMARLL 1343 (1388)
Q Consensus 1273 ~v~~Ll~~g~~~~~~-~~g~tpL~~A~~~g~~~iv~~Ll~~g~~--~~~~~~~~g~T~Lh~A~~~~~~~~v~~L 1343 (1388)
++++|++.|++++.. ..|.||++.++.... +++|++.|++ ++.++ ..|+||||+|+..|+.++|+.+
T Consensus 138 ~v~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~---~~~ll~~ga~~~~~~~d-~~G~TpL~~A~~~g~~~~v~~~ 207 (229)
T 2vge_A 138 CATYLADVEQSMGLMNSGAVYALWDYSAEFG---DELSFREGESVTVLRRD-GPEETDWWWAALHGQEGYVPRN 207 (229)
T ss_dssp HHHHHHHHHHHTTTSGGGEEEESSCBCCSST---TBCCBCTTCEEEEEESS-CTTCSSEEEEEETTEEEEEEGG
T ss_pred HHHHHHHcCCCcccccCCchHHHHHHhhccc---cccCccccccccccccC-CCcccHHHHHHHcCCcceeehh
Confidence 999999999999884 467899997665543 3678899988 44444 4799999999999999988753
No 74
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.94 E-value=5.5e-26 Score=233.94 Aligned_cols=162 Identities=27% Similarity=0.355 Sum_probs=77.3
Q ss_pred CCcHHHHHHhcCcHHHHHHHHhC-CCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCcccCCCCCCCCcchhhhccc
Q psy13737 1168 GLTPLHLCAQEDRVGVAELLLKN-NAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRPIGILFILFP 1246 (1388)
Q Consensus 1168 g~t~Lh~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~ 1246 (1388)
+.||||.|+..|+.+++++|++. +.+++.++..|+||||+|+..|+.+++++|++.|++++.
T Consensus 5 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~----------------- 67 (179)
T 3f6q_A 5 FMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINV----------------- 67 (179)
T ss_dssp --CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-----------------
T ss_pred HHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCC-----------------
Confidence 34444444444444444444443 333444444444444444444444444444444444332
Q ss_pred cccccccCCCCCCChHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCCCC
Q psy13737 1247 FIIGYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNA-TNKGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGF 1325 (1388)
Q Consensus 1247 ~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~-~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~ 1325 (1388)
.+..|+||||+|+..|+.+++++|++.|++++. +..|+||||+|+..|+.+++++|+++|++++..+. .|+
T Consensus 68 -------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~-~g~ 139 (179)
T 3f6q_A 68 -------MNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNK-YGE 139 (179)
T ss_dssp -------CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCT-TSC
T ss_pred -------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhcc-CCC
Confidence 333444444444444444455555555544443 33455555555555555555555555555544442 455
Q ss_pred cHHHHHHHcCCHHHHHHHHhCCCCCCCCC
Q psy13737 1326 TPLHIACHYGQISMARLLLDQSANVSCTT 1354 (1388)
Q Consensus 1326 T~Lh~A~~~~~~~~v~~Ll~~ga~~~~~d 1354 (1388)
||||+|+..++.+++++|++.|++++..+
T Consensus 140 tpl~~A~~~~~~~~~~~L~~~g~~~~~~~ 168 (179)
T 3f6q_A 140 MPVDKAKAPLRELLRERAEKMGQNLNRIP 168 (179)
T ss_dssp CGGGGSCHHHHHHHHHHHHHTTCCCSCBC
T ss_pred CcHHHHHHHHHHHHHHHHHHhhcCcccCC
Confidence 55555555555555555555555554443
No 75
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.93 E-value=8.2e-26 Score=226.94 Aligned_cols=152 Identities=27% Similarity=0.434 Sum_probs=140.8
Q ss_pred CCcHHHHHHHhCCHHHHHHHHhC-CCCcccCCCCCCCCcchhhhccccccccccCCCCCCChHHHHHHcCCHHHHHHHHH
Q psy13737 1201 GFTPLHIACHYGQISMARLLLDQ-SANVTVPKNFPSRPIGILFILFPFIIGYTNTTDQGFTPLHHSAQQGHSTIVALLLD 1279 (1388)
Q Consensus 1201 g~tpL~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~ 1279 (1388)
|.||||.|+..|+.++++.|++. +.+++. .+..|+||||+ +..|+.+++++|++
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~------------------------~~~~g~t~L~~-~~~~~~~~v~~Ll~ 56 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDA------------------------LNRFGKTALQV-MMFGSTAIALELLK 56 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTC------------------------CCTTSCCHHHH-SCTTCHHHHHHHHH
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccc------------------------cCCCCCcHHHH-HHcCCHHHHHHHHH
Confidence 56899999999999999999998 224443 67789999999 99999999999999
Q ss_pred cCCCCCC-CCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCC
Q psy13737 1280 RGASPNA-TNKGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGF 1358 (1388)
Q Consensus 1280 ~g~~~~~-~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~ga~~~~~d~~G~ 1358 (1388)
.|++++. +..|+||||+|+..|+.+++++|+++|++++..+. .|+||||+|+..|+.+++++|++. ++++.+|.+|+
T Consensus 57 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~ 134 (156)
T 1bd8_A 57 QGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDG-TGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGL 134 (156)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCT-TSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSC
T ss_pred CCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCC-CCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCC
Confidence 9999987 56799999999999999999999999999998875 799999999999999999999999 99999999999
Q ss_pred cHHHHHHHhCcHHHHHHHHHC
Q psy13737 1359 TPLHHSAQQGHSTIVALLLDR 1379 (1388)
Q Consensus 1359 tpL~~A~~~g~~~~v~~Ll~~ 1379 (1388)
||||+|++.|+.++|++|+++
T Consensus 135 t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 135 TPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp CHHHHHHHSCCHHHHHHHHTT
T ss_pred CHHHHHHHcCcHHHHHHHHhh
Confidence 999999999999999999975
No 76
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.93 E-value=6.7e-27 Score=253.05 Aligned_cols=163 Identities=21% Similarity=0.307 Sum_probs=107.1
Q ss_pred CCCCcHHHHHHHhCCHHHHHHHHhCCCCcccCCCCCCCCcchhhhccccccccccCCCCCCChHHHHHHcCCHHHHHHHH
Q psy13737 1199 KKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRPIGILFILFPFIIGYTNTTDQGFTPLHHSAQQGHSTIVALLL 1278 (1388)
Q Consensus 1199 ~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll 1278 (1388)
..|.||||.|+..++.++++.|+++|++++. +..|.||||.|+..|+.++|++|+
T Consensus 3 ~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~-------------------------~~~~~t~L~~A~~~g~~~~v~~Ll 57 (239)
T 1ycs_B 3 ITGQVSLPPGKRTNLRKTGSERIAHGMRVKF-------------------------NPLPLALLLDSSLEGEFDLVQRII 57 (239)
T ss_dssp -----------------------------------------------------------CHHHHHHHHHHTCHHHHHHHT
T ss_pred ccccccCchhhhhhhHHHHHHHhccCCCccc-------------------------CchhhHHHHHHHHcCCHHHHHHHH
Confidence 4578888888888888888888888877753 345778888888888888888888
Q ss_pred HcCCCCCC-CCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCC
Q psy13737 1279 DRGASPNA-TNKGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQG 1357 (1388)
Q Consensus 1279 ~~g~~~~~-~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~ga~~~~~d~~G 1357 (1388)
+.|++++. +..|+||||+|+..|+.++|++|+++|++++..+. .|+||||+|+..|+.++|++|+++|++++.++..|
T Consensus 58 ~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~-~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~ 136 (239)
T 1ycs_B 58 YEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADS-DGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSD 136 (239)
T ss_dssp STTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCT-TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSS
T ss_pred HcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCC
Confidence 88888876 55688888888888888888888888888887765 68888888888888888888888888888888776
Q ss_pred C-cHHHHH--HHhCcHHHHHHHHHCCCCCCCCC
Q psy13737 1358 F-TPLHHS--AQQGHSTIVALLLDRGASPNATN 1387 (1388)
Q Consensus 1358 ~-tpL~~A--~~~g~~~~v~~Ll~~ga~~~~~~ 1387 (1388)
. ||||+| +..|+.++|++|+++|++++..|
T Consensus 137 ~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~~~ 169 (239)
T 1ycs_B 137 MQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMN 169 (239)
T ss_dssp CCCHHHHCCSSSTTCCCHHHHHHHHHHHTTTTG
T ss_pred CcchHHHHHHhhhccHHHHHHHHHhhhcccccc
Confidence 6 888888 77788888888888888887764
No 77
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.93 E-value=5.4e-27 Score=253.79 Aligned_cols=178 Identities=19% Similarity=0.267 Sum_probs=95.9
Q ss_pred CCCCcHHHHHHhcCCHHHHHHHHhCCCCccccccCCCcHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHhC
Q psy13737 1133 VAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYG 1212 (1388)
Q Consensus 1133 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~tpL~~A~~~g 1212 (1388)
..|.||||.|+..++.++++.|+++|++++.. ..|.||||.|+..|+.+++++|++.|++++.+|..|+||||+|+..|
T Consensus 3 ~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~-~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g 81 (239)
T 1ycs_B 3 ITGQVSLPPGKRTNLRKTGSERIAHGMRVKFN-PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAG 81 (239)
T ss_dssp -----------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHT
T ss_pred ccccccCchhhhhhhHHHHHHHhccCCCcccC-chhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence 45777777777777777777777777777643 56677777777777777777777777777777777777777777777
Q ss_pred CHHHHHHHHhCCCCcccCCCCCCCCcchhhhccccccccccCCCCCCChHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCC
Q psy13737 1213 QISMARLLLDQSANVTVPKNFPSRPIGILFILFPFIIGYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNA-TNKGF 1291 (1388)
Q Consensus 1213 ~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~-~~~g~ 1291 (1388)
+.+++++|+++|++++. .|..|+||||+|+..|+.++|++|+++|++++. +..|.
T Consensus 82 ~~~~v~~Ll~~ga~~~~------------------------~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~ 137 (239)
T 1ycs_B 82 HTEIVKFLVQFGVNVNA------------------------ADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDM 137 (239)
T ss_dssp CHHHHHHHHHHTCCTTC------------------------CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSC
T ss_pred CHHHHHHHHHcCCCCCc------------------------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCC
Confidence 77777777777766654 555677777777777777777777777776665 22333
Q ss_pred -cHHHHH--HhcCcHHHHHHHHHcCCCCCCCC--------CCCCCcHHHHHHHcC
Q psy13737 1292 -TPLHHS--AQQGHSTIVALLLDRGASPNATN--------KTRGFTPLHIACHYG 1335 (1388)
Q Consensus 1292 -tpL~~A--~~~g~~~iv~~Ll~~g~~~~~~~--------~~~g~T~Lh~A~~~~ 1335 (1388)
||||+| +..|+.+++++|++.|++++..+ +..|.||+++|...|
T Consensus 138 ~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G 192 (239)
T 1ycs_B 138 QTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDDELPMKEG 192 (239)
T ss_dssp CCHHHHCCSSSTTCCCHHHHHHHHHHHTTTTGGGEEEESSCBCCSSTTBCCBCSS
T ss_pred cchHHHHHHhhhccHHHHHHHHHhhhcccccccceEEEEeccCCCCCCcccccCC
Confidence 777766 56666677777777666665432 224555555555444
No 78
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.93 E-value=1.4e-25 Score=227.58 Aligned_cols=156 Identities=31% Similarity=0.494 Sum_probs=75.0
Q ss_pred CCCcHHHHHHhcCcHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCcccCCCCCCCCcchhhhcc
Q psy13737 1167 NGLTPLHLCAQEDRVGVAELLLK-NNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRPIGILFILF 1245 (1388)
Q Consensus 1167 ~g~t~Lh~A~~~~~~~~~~~Ll~-~g~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~ 1245 (1388)
.|.||||.|+..|+.++++.|++ .+.+++..+..|+||||+|+..|+.+++++|+++|++++.
T Consensus 7 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~---------------- 70 (165)
T 3twr_A 7 EADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHA---------------- 70 (165)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC----------------
T ss_pred hhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCc----------------
Confidence 34444444444444444444444 2333444444444444444444444444444444444432
Q ss_pred ccccccccCCCCCCChHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCCC
Q psy13737 1246 PFIIGYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNA-TNKGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRG 1324 (1388)
Q Consensus 1246 ~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~-~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g 1324 (1388)
.+..|+||||+|+..|+.+++++|+++|++++. +..|+||||+|+..|+.+++++|+++|++++..+. .|
T Consensus 71 --------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~-~g 141 (165)
T 3twr_A 71 --------KDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNR-DG 141 (165)
T ss_dssp --------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TS
T ss_pred --------cCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCC-CC
Confidence 333444555555555555555555555555443 33455555555555555555555555555554442 45
Q ss_pred CcHHHHHHHcCCHHHHHHHHhCCC
Q psy13737 1325 FTPLHIACHYGQISMARLLLDQSA 1348 (1388)
Q Consensus 1325 ~T~Lh~A~~~~~~~~v~~Ll~~ga 1348 (1388)
+||||+|+. |+.+++++|++.||
T Consensus 142 ~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 142 NTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp CCTGGGSCT-TCHHHHHHHHTC--
T ss_pred CChhHhHhc-CChHHHHHHhhccc
Confidence 555555444 55555555555543
No 79
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.92 E-value=8.8e-25 Score=219.38 Aligned_cols=150 Identities=27% Similarity=0.437 Sum_probs=82.0
Q ss_pred CcHHHHHHhcCcHHHHHHHHhC-CCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCcccCCCCCCCCcchhhhcccc
Q psy13737 1169 LTPLHLCAQEDRVGVAELLLKN-NAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRPIGILFILFPF 1247 (1388)
Q Consensus 1169 ~t~Lh~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~ 1247 (1388)
.||||.|+..|+.++++.|++. +.+++..+..|+||||+ +..|+.+++++|+++|++++.
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~------------------ 63 (156)
T 1bd8_A 3 GDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNV------------------ 63 (156)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTC------------------
T ss_pred chHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCC------------------
Confidence 3455555555555555555544 22455555555555555 555555555555555554433
Q ss_pred ccccccCCCCCCChHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCCCCc
Q psy13737 1248 IIGYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNA-TNKGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFT 1326 (1388)
Q Consensus 1248 ~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~-~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~T 1326 (1388)
.+..|+||||+|+..|+.+++++|++.|++++. +..|+||||+|+..|+.++|++|++. ++++..+. .|+|
T Consensus 64 ------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~-~g~t 135 (156)
T 1bd8_A 64 ------QDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDA-RGLT 135 (156)
T ss_dssp ------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCT-TSCC
T ss_pred ------cCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCC-CCCC
Confidence 344455555555555555555555555555554 33456666666666666666666655 55555443 4666
Q ss_pred HHHHHHHcCCHHHHHHHHh
Q psy13737 1327 PLHIACHYGQISMARLLLD 1345 (1388)
Q Consensus 1327 ~Lh~A~~~~~~~~v~~Ll~ 1345 (1388)
|||+|+..|+.+++++|++
T Consensus 136 ~l~~A~~~~~~~~v~~Ll~ 154 (156)
T 1bd8_A 136 PLELALQRGAQDLVDILQG 154 (156)
T ss_dssp HHHHHHHSCCHHHHHHHHT
T ss_pred HHHHHHHcCcHHHHHHHHh
Confidence 6666666666666666655
No 80
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.92 E-value=1.8e-24 Score=216.00 Aligned_cols=151 Identities=30% Similarity=0.454 Sum_probs=135.1
Q ss_pred cccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccccCCCchHHHHHHhCCH
Q psy13737 187 YLTALHVAAHCGHARVAKTLLDKKADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRI 266 (1388)
Q Consensus 187 ~~~~l~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~A~~~g~~ 266 (1388)
..++|+.|+..|+.++|++|+++|.+++ .+..|.||||+|+..|+.+++++|+++|++++..+..+.||||+|+..|+.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 80 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHA 80 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCH
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChH
Confidence 3489999999999999999999998876 477899999999999999999999999999998888899999999999999
Q ss_pred HHHHHHHHcCCCcccccCCCCCHHHHHHHhCcHHHHHHHHhCCCCccCcCCCCCCHHHHHHHhCCHHHHHHH
Q psy13737 267 KVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELLLKHGASIEATTEVREPMLHIACKKNRIKVVELL 338 (1388)
Q Consensus 267 ~iv~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~L 338 (1388)
+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++..+..|.|||++|+..|+.+++++|
T Consensus 81 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 81 NIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 999999999999888888888999999999999999999998888888888888888888888888888886
No 81
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.92 E-value=6.2e-25 Score=213.91 Aligned_cols=129 Identities=26% Similarity=0.353 Sum_probs=122.8
Q ss_pred cCCCCCCChHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHH
Q psy13737 1253 NTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNA-TNKGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIA 1331 (1388)
Q Consensus 1253 ~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~-~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~T~Lh~A 1331 (1388)
..+..|.||||+|+..|+.+++++|++.|++++. +..|+||||+|+. |+.+++++|+++|++++..+...|+||||+|
T Consensus 7 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A 85 (136)
T 1d9s_A 7 MLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPVHDA 85 (136)
T ss_dssp CCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCHHHHH
T ss_pred CCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCHHHHH
Confidence 4788999999999999999999999999999987 5679999999999 9999999999999999988763399999999
Q ss_pred HHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHHCCCC
Q psy13737 1332 CHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGAS 1382 (1388)
Q Consensus 1332 ~~~~~~~~v~~Ll~~ga~~~~~d~~G~tpL~~A~~~g~~~~v~~Ll~~ga~ 1382 (1388)
+..|+.+++++|+++|++++.+|..|+||||+|++.|+.+++++|+++|||
T Consensus 86 ~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 86 AREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp HHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred HHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 999999999999999999999999999999999999999999999999986
No 82
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.92 E-value=9.7e-26 Score=230.78 Aligned_cols=160 Identities=16% Similarity=0.184 Sum_probs=141.2
Q ss_pred CCcHHHHHHHhCCHHHHHHHHhCCCCcccCCCCCCCCcchhhhccccccccccCC-CCCCChHHHHHHcCCH----HHHH
Q psy13737 1201 GFTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRPIGILFILFPFIIGYTNTT-DQGFTPLHHSAQQGHS----TIVA 1275 (1388)
Q Consensus 1201 g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~t~L~~Aa~~g~~----~~v~ 1275 (1388)
+.++|+.|++.|+.+.++.++..+.+. .+ ..|+||||+|+..|+. ++++
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~~~--------------------------~~~~~g~T~Lh~A~~~~~~~~~~~iv~ 59 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGYED--------------------------KESVLKSNILYDVLRNNNDEARYKISM 59 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSSSC--------------------------HHHHHTTTHHHHHTTCSCHHHHHHHHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCccc--------------------------ccccCCCCHHHHHHHcCCcchHHHHHH
Confidence 568899999999999999998876432 23 5699999999999975 5999
Q ss_pred HHHHcCCCCCC-CCCCCcHHHHHHhcCc------HHHHHHHHHcCCCCCCCCCCCCC-cHHHHHHHcC-----CHHHHHH
Q psy13737 1276 LLLDRGASPNA-TNKGFTPLHHSAQQGH------STIVALLLDRGASPNATNKTRGF-TPLHIACHYG-----QISMARL 1342 (1388)
Q Consensus 1276 ~Ll~~g~~~~~-~~~g~tpL~~A~~~g~------~~iv~~Ll~~g~~~~~~~~~~g~-T~Lh~A~~~~-----~~~~v~~ 1342 (1388)
+|+++|++++. +..|+||||+|+..|+ .++|++|+++|++++.++. .|+ ||||+|+..+ ..+++++
T Consensus 60 ~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~-~g~ttpLh~A~~~~~~~~~~~~iv~~ 138 (186)
T 3t8k_A 60 FLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYK-PYKIVVFKNIFNYFVDENEMIPLYKL 138 (186)
T ss_dssp HHHHTTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBG-GGTBCTTGGGGGCCSCHHHHHHHHHH
T ss_pred HHHHCCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCC-CcCchHHHHHHHcCCChhhHHHHHHH
Confidence 99999999998 6679999999999987 5889999999999999885 699 9999999954 4569999
Q ss_pred HHh-CCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHHCCCCCCCCC
Q psy13737 1343 LLD-QSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATN 1387 (1388)
Q Consensus 1343 Ll~-~ga~~~~~d~~G~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~ 1387 (1388)
|++ +|++++.+|..|+||||+|++.|+.++|++|++...+.+.++
T Consensus 139 Ll~~~gad~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~~~~~~~ 184 (186)
T 3t8k_A 139 IFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDYIKKYNLKE 184 (186)
T ss_dssp HHTSTTCCTTCCCTTSCCHHHHHHTTTCHHHHHHHHHHHHHHTCCC
T ss_pred HHHhcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHHHHHHhccc
Confidence 999 999999999999999999999999999999998776666554
No 83
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.90 E-value=2.5e-24 Score=215.41 Aligned_cols=133 Identities=26% Similarity=0.387 Sum_probs=118.0
Q ss_pred CCCCCCChHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCCCCc-HHHHH
Q psy13737 1254 TTDQGFTPLHHSAQQGHSTIVALLLDRGASPNA-TNKGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFT-PLHIA 1331 (1388)
Q Consensus 1254 ~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~-~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~T-~Lh~A 1331 (1388)
.+..|.||||+|+..|+.++|++|+++|++++. +..|+||||+|+ .|+.++|++|+++|++++..+. .|+| |||+|
T Consensus 8 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~-~g~ttpL~~A 85 (156)
T 1bi7_B 8 SMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADP-ATLTRPVHDA 85 (156)
T ss_dssp --CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCT-TTCCCHHHHH
T ss_pred CCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCC-CCCcHHHHHH
Confidence 567899999999999999999999999999987 567999999985 9999999999999999998875 6998 99999
Q ss_pred HHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHHCCCCCCCCCC
Q psy13737 1332 CHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATNK 1388 (1388)
Q Consensus 1332 ~~~~~~~~v~~Ll~~ga~~~~~d~~G~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~ 1388 (1388)
+..|+.++|++|+++|++++.+|..|+||||+|++.|+.++|++|+++|++++.+|+
T Consensus 86 ~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 142 (156)
T 1bi7_B 86 AREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNH 142 (156)
T ss_dssp HHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC--------
T ss_pred HHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCc
Confidence 999999999999999999999999999999999999999999999999999998764
No 84
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.90 E-value=5.5e-24 Score=207.14 Aligned_cols=134 Identities=24% Similarity=0.278 Sum_probs=127.8
Q ss_pred CCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCccccccCCCcHHHHHHhcCcHHHHHHHHhCCCCCCCCCCC-CCc
Q psy13737 1125 GAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKK-GFT 1203 (1388)
Q Consensus 1125 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~~~~~~~~~-g~t 1203 (1388)
+++++..+..|.||||+|+..|+.+++++|+++|++++.++..|+||||+|+. ++.+++++|+++|++++.+|.. |+|
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t 80 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTR 80 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBC
T ss_pred CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCC
Confidence 46788999999999999999999999999999999999999999999999999 9999999999999999999999 999
Q ss_pred HHHHHHHhCCHHHHHHHHhCCCCcccCCCCCCCCcchhhhccccccccccCCCCCCChHHHHHHcCCHHHHHHHHHcCCC
Q psy13737 1204 PLHIACHYGQISMARLLLDQSANVTVPKNFPSRPIGILFILFPFIIGYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGAS 1283 (1388)
Q Consensus 1204 pL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~ 1283 (1388)
|||+|+..|+.+++++|+++|++++. .+..|+||||+|+..|+.+++++|+++|+|
T Consensus 81 ~L~~A~~~~~~~~v~~Ll~~ga~~~~------------------------~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 81 PVHDAAREGFLDTLVVLHRAGARLDV------------------------CDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp HHHHHHHHTCHHHHHHHHHTCCCCCC------------------------CSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCc------------------------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 99999999999999999999999875 677899999999999999999999999885
No 85
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.90 E-value=4.9e-24 Score=213.27 Aligned_cols=144 Identities=23% Similarity=0.347 Sum_probs=106.7
Q ss_pred CCCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCcccCCCCCCCCcchhhhccccccccccCCCCCCChHHHHHHcCCHHHH
Q psy13737 1195 DTPTKKGFTPLHIACHYGQISMARLLLDQSANVTVPKNFPSRPIGILFILFPFIIGYTNTTDQGFTPLHHSAQQGHSTIV 1274 (1388)
Q Consensus 1195 ~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v 1274 (1388)
+..+..|.||||+|+..|+.+++++|+++|++++. .+..|+||||+|+ .|+.+++
T Consensus 6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~------------------------~~~~g~t~L~~A~-~~~~~~v 60 (156)
T 1bi7_B 6 GSSMEPSADWLATAAARGRVEEVRALLEAGANPNA------------------------PNSYGRRPIQVMM-MGSARVA 60 (156)
T ss_dssp ----CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTC------------------------CCSSSCCTTTSSC-TTCHHHH
T ss_pred cCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCC------------------------CCCCCCCHHHHHH-cCCHHHH
Confidence 44567788888888888888888888888887764 5667888888875 8888899
Q ss_pred HHHHHcCCCCCC-CCCCCc-HHHHHHhcCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy13737 1275 ALLLDRGASPNA-TNKGFT-PLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSC 1352 (1388)
Q Consensus 1275 ~~Ll~~g~~~~~-~~~g~t-pL~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~ga~~~~ 1352 (1388)
++|+++|++++. +..|+| |||+|+..|+.++|++|+++|++++..+. .|+||||+|+..|+.+++++|+++|++++.
T Consensus 61 ~~Ll~~g~~~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~-~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~ 139 (156)
T 1bi7_B 61 ELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDA-WGRLPVDLAEELGHRDVARYLRAAAGGTRG 139 (156)
T ss_dssp HHHHTTTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCT-TCCCHHHHHHHHTCHHHHHHHSSCC-----
T ss_pred HHHHHcCCCCCCcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCCcccCC-CCCCHHHHHHHhCHHHHHHHHHHcCCCCCc
Confidence 999988888887 456888 99999999999999999999999988774 699999999999999999999999999999
Q ss_pred CCCCCCcHHHHH
Q psy13737 1353 TTDQGFTPLHHS 1364 (1388)
Q Consensus 1353 ~d~~G~tpL~~A 1364 (1388)
+|..|.||.+-+
T Consensus 140 ~~~~g~t~~~~~ 151 (156)
T 1bi7_B 140 SNHARIDAAEGP 151 (156)
T ss_dssp ------------
T ss_pred cCcCcCcccccC
Confidence 999999998744
No 86
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.90 E-value=4.5e-24 Score=218.37 Aligned_cols=164 Identities=14% Similarity=0.144 Sum_probs=114.2
Q ss_pred CCcHHHHHHhcCCHHHHHHHHhCCCCccccc-cCCCcHHHHHHhcCcH----HHHHHHHhCCCCCCCCCCCCCcHHHHHH
Q psy13737 1135 GFTPLHLSASEGHADMSAMLLEHGADVSHAA-KNGLTPLHLCAQEDRV----GVAELLLKNNAQVDTPTKKGFTPLHIAC 1209 (1388)
Q Consensus 1135 g~t~L~~A~~~~~~~~v~~Ll~~g~d~~~~~-~~g~t~Lh~A~~~~~~----~~~~~Ll~~g~~~~~~~~~g~tpL~~A~ 1209 (1388)
+.++|+.|++.|+.+.++.+++.+. +..+ ..|+||||+|+..++. +++++|+++|++++.+|..|+||||+|+
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~--~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~ 83 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGY--EDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLF 83 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSS--SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCc--ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Confidence 4689999999999999999998764 4455 7899999999999875 5999999999999999999999999999
Q ss_pred HhCC------HHHHHHHHhCCCCcccCCCCCCCCcchhhhccccccccccCCCCCC-ChHHHHHHcCCHHHHHHHHHcCC
Q psy13737 1210 HYGQ------ISMARLLLDQSANVTVPKNFPSRPIGILFILFPFIIGYTNTTDQGF-TPLHHSAQQGHSTIVALLLDRGA 1282 (1388)
Q Consensus 1210 ~~g~------~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-t~L~~Aa~~g~~~~v~~Ll~~g~ 1282 (1388)
..|+ .+++++|+++|++++. +|..|+ ||||+|+..+..+
T Consensus 84 ~~~~~~~~~~~~iv~~Ll~~Gadin~------------------------~d~~g~ttpLh~A~~~~~~~---------- 129 (186)
T 3t8k_A 84 QGGGNDITGTTELCKIFLEKGADITA------------------------LYKPYKIVVFKNIFNYFVDE---------- 129 (186)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCCSSS------------------------CBGGGTBCTTGGGGGCCSCH----------
T ss_pred HcCCcchhhHHHHHHHHHHCCCCCCc------------------------cCCCcCchHHHHHHHcCCCh----------
Confidence 9886 3556666666666554 444555 5555555533210
Q ss_pred CCCCCCCCCcHHHHHHhcCcHHHHHHHHH-cCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy13737 1283 SPNATNKGFTPLHHSAQQGHSTIVALLLD-RGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSC 1352 (1388)
Q Consensus 1283 ~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~-~g~~~~~~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~ga~~~~ 1352 (1388)
.++.+++++|++ +|++++..+. .|+||||+|+..|+.++|++|+++..+.+.
T Consensus 130 -----------------~~~~~iv~~Ll~~~gad~~~~d~-~G~TpL~~A~~~~~~~~v~~L~~~~~~~~~ 182 (186)
T 3t8k_A 130 -----------------NEMIPLYKLIFSQSGLQLLIKDK-WGLTALEFVKRCQKPIALKMMEDYIKKYNL 182 (186)
T ss_dssp -----------------HHHHHHHHHHHTSTTCCTTCCCT-TSCCHHHHHHTTTCHHHHHHHHHHHHHHTC
T ss_pred -----------------hhHHHHHHHHHHhcCCCCcccCC-CCCCHHHHHHHcCCHHHHHHHHHHHHHHhc
Confidence 122345555555 5555555543 455666666655555555555554443333
No 87
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.89 E-value=8.8e-23 Score=196.46 Aligned_cols=125 Identities=47% Similarity=0.762 Sum_probs=119.9
Q ss_pred CCCChHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcC
Q psy13737 1257 QGFTPLHHSAQQGHSTIVALLLDRGASPNA-TNKGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYG 1335 (1388)
Q Consensus 1257 ~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~-~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~T~Lh~A~~~~ 1335 (1388)
+|+||||+|+..|+.+++++|++.|++++. +..|.||||+|+..|+.+++++|++.|++++..+. .|+||||+|+..|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~g~t~l~~A~~~~ 79 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDK-NGRTPLHLAARNG 79 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTT
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCC-CCCcHHHHHHHcC
Confidence 489999999999999999999999999986 56799999999999999999999999999988775 7999999999999
Q ss_pred CHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHHCCCC
Q psy13737 1336 QISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGAS 1382 (1388)
Q Consensus 1336 ~~~~v~~Ll~~ga~~~~~d~~G~tpL~~A~~~g~~~~v~~Ll~~ga~ 1382 (1388)
+.+++++|+++|++++.+|..|+||||+|++.|+.+++++|+++||+
T Consensus 80 ~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 80 HLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred hHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999999999996
No 88
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.89 E-value=4.2e-23 Score=200.86 Aligned_cols=126 Identities=33% Similarity=0.496 Sum_probs=118.1
Q ss_pred CCCCCCChHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHH
Q psy13737 1254 TTDQGFTPLHHSAQQGHSTIVALLLDRGASPNA-TNKGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIAC 1332 (1388)
Q Consensus 1254 ~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~-~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~T~Lh~A~ 1332 (1388)
....|.||||+|+..|+.+++++|++.|++++. +..|+||||+|+..|+.+++++|++.|++++..+. .|+||||+|+
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~-~g~t~L~~A~ 88 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDA-IGFTPLHLAA 88 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TCCCHHHHHH
T ss_pred ccccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCC-CCCCHHHHHH
Confidence 345688999999999999999999999999987 56799999999999999999999999999998775 7999999999
Q ss_pred HcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHHCC
Q psy13737 1333 HYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRG 1380 (1388)
Q Consensus 1333 ~~~~~~~v~~Ll~~ga~~~~~d~~G~tpL~~A~~~g~~~~v~~Ll~~g 1380 (1388)
..|+.+++++|+++|++++.+|..|+||||+|++.|+.+++++|+++|
T Consensus 89 ~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 89 FIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 999999999999999999999999999999999999999999999987
No 89
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.87 E-value=7e-23 Score=199.89 Aligned_cols=129 Identities=30% Similarity=0.485 Sum_probs=117.1
Q ss_pred CCCCCCChHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHH
Q psy13737 1254 TTDQGFTPLHHSAQQGHSTIVALLLDRGASPNA-TNKGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIAC 1332 (1388)
Q Consensus 1254 ~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~-~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~T~Lh~A~ 1332 (1388)
++..|+||||+|+..|+.+++++|++.|++++. +..|+||||+|+..|+.+++++|+++|++++..+. .|+||||+|+
T Consensus 6 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~g~t~L~~A~ 84 (137)
T 3c5r_A 6 TNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGY-QNDSPLHDAA 84 (137)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCG-GGCCHHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCC-CCCCHHHHHH
Confidence 678999999999999999999999999999987 56799999999999999999999999999998775 7999999999
Q ss_pred HcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHHCCCCC
Q psy13737 1333 HYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGASP 1383 (1388)
Q Consensus 1333 ~~~~~~~v~~Ll~~ga~~~~~d~~G~tpL~~A~~~g~~~~v~~Ll~~ga~~ 1383 (1388)
..|+.+++++|+++|++++.+|..|+||||+|+..++.+++++|.+.+.++
T Consensus 85 ~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~s~ 135 (137)
T 3c5r_A 85 KNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNESSS 135 (137)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC-------
T ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhccccccCC
Confidence 999999999999999999999999999999999999999999999888765
No 90
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.87 E-value=6.4e-22 Score=192.50 Aligned_cols=127 Identities=31% Similarity=0.477 Sum_probs=119.2
Q ss_pred CCCCCCcHHHHHHhcCCHHHHHHHHhCCCCccccccCCCcHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH
Q psy13737 1131 ESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACH 1210 (1388)
Q Consensus 1131 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~tpL~~A~~ 1210 (1388)
....|.||||+|+..|+.+++++|+++|++++..|..|+||||+|+..++.+++++|++.|++++.+|..|+||||+|+.
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~ 89 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAF 89 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred ccccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHH
Confidence 34567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCHHHHHHHHhCCCCcccCCCCCCCCcchhhhccccccccccCCCCCCChHHHHHHcCCHHHHHHHHHcC
Q psy13737 1211 YGQISMARLLLDQSANVTVPKNFPSRPIGILFILFPFIIGYTNTTDQGFTPLHHSAQQGHSTIVALLLDRG 1281 (1388)
Q Consensus 1211 ~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g 1281 (1388)
.|+.+++++|+++|++++. .+..|+||||+|+..|+.+++++|++.|
T Consensus 90 ~~~~~~v~~Ll~~g~~~~~------------------------~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 90 IGHLEIAEVLLKHGADVNA------------------------QDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HTCHHHHHHHHHTTCCTTC------------------------CCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred cCCHHHHHHHHHcCCCCcC------------------------cCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 9999999999999998875 6788999999999999999999999876
No 91
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.87 E-value=2e-21 Score=186.91 Aligned_cols=126 Identities=46% Similarity=0.748 Sum_probs=120.2
Q ss_pred CCCcHHHHHHhcCCHHHHHHHHhCCCCccccccCCCcHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHhCC
Q psy13737 1134 AGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQ 1213 (1388)
Q Consensus 1134 ~g~t~L~~A~~~~~~~~v~~Ll~~g~d~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~tpL~~A~~~g~ 1213 (1388)
+|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++.+++++|++.|++++.+|..|.||||+|+..|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~ 80 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCh
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCcccCCCCCCCCcchhhhccccccccccCCCCCCChHHHHHHcCCHHHHHHHHHcCCC
Q psy13737 1214 ISMARLLLDQSANVTVPKNFPSRPIGILFILFPFIIGYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGAS 1283 (1388)
Q Consensus 1214 ~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~ 1283 (1388)
.+++++|+++|++++. .+..|.||||+|+..|+.+++++|+++|++
T Consensus 81 ~~~~~~Ll~~g~~~~~------------------------~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 81 LEVVKLLLEAGADVNA------------------------KDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HHHHHHHHHTTCCTTC------------------------CCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HHHHHHHHHcCCCCcc------------------------cCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 9999999999998765 677899999999999999999999999985
No 92
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.86 E-value=6.6e-23 Score=211.31 Aligned_cols=62 Identities=24% Similarity=0.288 Sum_probs=34.7
Q ss_pred cCCCcHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCcc
Q psy13737 1166 KNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQISMARLLLDQSANVT 1228 (1388)
Q Consensus 1166 ~~g~t~Lh~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~ 1228 (1388)
..|.||||+|+..|+.++++.|++ |++++.+|..|+||||+|+..|+.+++++|+++|++++
T Consensus 42 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 103 (183)
T 3deo_A 42 SEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLD 103 (183)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 345555555555555555555555 55555555555555555555555555555555555443
No 93
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.86 E-value=3.1e-22 Score=195.26 Aligned_cols=134 Identities=28% Similarity=0.424 Sum_probs=115.9
Q ss_pred CCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCccccccCCCcHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCcH
Q psy13737 1125 GAKPNAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTP 1204 (1388)
Q Consensus 1125 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~tp 1204 (1388)
|+|| .++..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..++.+++++|++.|++++.+|..|+||
T Consensus 1 G~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~ 79 (137)
T 3c5r_A 1 GIDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSP 79 (137)
T ss_dssp ---C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCH
T ss_pred CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCH
Confidence 5677 688899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCHHHHHHHHhCCCCcccCCCCCCCCcchhhhccccccccccCCCCCCChHHHHHHcCCHHHHHHHHHcCCC
Q psy13737 1205 LHIACHYGQISMARLLLDQSANVTVPKNFPSRPIGILFILFPFIIGYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGAS 1283 (1388)
Q Consensus 1205 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~ 1283 (1388)
||+|+..|+.+++++|+++|++++. .+..|.||||+|+..+..+++++|.+.+..
T Consensus 80 L~~A~~~~~~~~v~~Ll~~ga~~~~------------------------~~~~g~tpl~~A~~~~~~~~l~~l~~~~~s 134 (137)
T 3c5r_A 80 LHDAAKNGHVDIVKLLLSYGASRNA------------------------VNIFGLRPVDYTDDESMKSLLLLPEKNESS 134 (137)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTC------------------------CCTTSCCGGGGCCCHHHHHHHSCC------
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCC------------------------CCCCCCCHHHHHhhccHHHHHhhccccccC
Confidence 9999999999999999999998875 677899999999988888888887776543
No 94
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.86 E-value=5.5e-23 Score=222.47 Aligned_cols=167 Identities=23% Similarity=0.258 Sum_probs=119.2
Q ss_pred CCcHHHHHHhcCCHHHHHHHHhCCCCccccccCCCcHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHhCCH
Q psy13737 1135 GFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQI 1214 (1388)
Q Consensus 1135 g~t~L~~A~~~~~~~~v~~Ll~~g~d~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~tpL~~A~~~g~~ 1214 (1388)
+.++++.++..|+.+.+..+...+.++ +..|.||||+|+..|+.++++.|++ |++++.+|..|+||||+||..|+.
T Consensus 15 ~~~~~l~~~~~g~~~~~~~~~~~~~~~---~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~ 90 (244)
T 3ui2_A 15 GAMEYLIEWKDGHSPSWVPSSYIAADV---VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSD 90 (244)
T ss_dssp TEEEEEEEESSCCCCEEEEGGGSCHHH---HHHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCH
T ss_pred CccHHHHHHHcCCCccccccccccccc---ccCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCH
Confidence 445555555555555544444443333 3467788888888888888888888 788888888888888888888888
Q ss_pred HHHHHHHhCCCCcccCCCCCCCCcchhhhccccccccccCC-CCCCChHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCc
Q psy13737 1215 SMARLLLDQSANVTVPKNFPSRPIGILFILFPFIIGYTNTT-DQGFTPLHHSAQQGHSTIVALLLDRGASPNA-TNKGFT 1292 (1388)
Q Consensus 1215 ~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~-~~~g~t 1292 (1388)
++|++|+++|++++. .+ ..|+||||+|+..|+.++|++|+++|++++. +..|+|
T Consensus 91 ~~v~~Ll~~ga~~~~------------------------~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t 146 (244)
T 3ui2_A 91 KCVRLLAEAGADLDH------------------------RDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLT 146 (244)
T ss_dssp HHHHHHHHTTCCTTC------------------------CCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCC
T ss_pred HHHHHHHHcCCCCCc------------------------CCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCc
Confidence 888888888877764 33 5677888888888888888888888888776 556888
Q ss_pred HHHHHHhcCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy13737 1293 PLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQS 1347 (1388)
Q Consensus 1293 pL~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~g 1347 (1388)
|||+|+..++ ...+.||||+|+..|+.+++++|++++
T Consensus 147 ~l~~A~~~~~------------------~~~~~~~l~~a~~~g~~~iv~~L~~~~ 183 (244)
T 3ui2_A 147 ALELAREILK------------------TTPKGNPMQFGRRIGLEKVINVLEGQV 183 (244)
T ss_dssp HHHHHHHHHT------------------TCCCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHh------------------ccCCCCHHHHHHHcChHHHHHHHHHhc
Confidence 8888875321 124678888888888888888887753
No 95
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.85 E-value=1.7e-21 Score=210.75 Aligned_cols=142 Identities=23% Similarity=0.308 Sum_probs=131.4
Q ss_pred CCCCcHHHHHHhcCCHHHHHHHHhCCCCccccccCCCcHHHHHHhcCcHHHHHHHHhCCCCCCCCC-CCCCcHHHHHHHh
Q psy13737 1133 VAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPT-KKGFTPLHIACHY 1211 (1388)
Q Consensus 1133 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~~~~~~~-~~g~tpL~~A~~~ 1211 (1388)
..|.||||+|+..|+.++++.|++ |++++.+|..|+||||+|+..|+.+++++|+++|++++.++ ..|+||||+|+..
T Consensus 43 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~ 121 (244)
T 3ui2_A 43 SEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGY 121 (244)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHT
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHc
Confidence 458899999999999999999999 99999999999999999999999999999999999999998 8899999999999
Q ss_pred CCHHHHHHHHhCCCCcccCCCCCCCCcchhhhccccccccccCCCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCCCCCC
Q psy13737 1212 GQISMARLLLDQSANVTVPKNFPSRPIGILFILFPFIIGYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATNKGF 1291 (1388)
Q Consensus 1212 g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~g~ 1291 (1388)
|+.+++++|+++|++++. .+..|+||||+|+..+. ...+.
T Consensus 122 g~~~~v~~Ll~~ga~~~~------------------------~d~~g~t~l~~A~~~~~----------------~~~~~ 161 (244)
T 3ui2_A 122 VRPEVVEALVELGADIEV------------------------EDERGLTALELAREILK----------------TTPKG 161 (244)
T ss_dssp TCHHHHHHHHHTTCCTTC------------------------CCTTCCCHHHHHHHHHT----------------TCCCS
T ss_pred CCHHHHHHHHHCCCCCCC------------------------CCCCCCcHHHHHHHHHh----------------ccCCC
Confidence 999999999999999876 77899999999996432 24689
Q ss_pred cHHHHHHhcCcHHHHHHHHHcCCC
Q psy13737 1292 TPLHHSAQQGHSTIVALLLDRGAS 1315 (1388)
Q Consensus 1292 tpL~~A~~~g~~~iv~~Ll~~g~~ 1315 (1388)
||||+|+..|+.+++++|++.+.+
T Consensus 162 ~~l~~a~~~g~~~iv~~L~~~~~~ 185 (244)
T 3ui2_A 162 NPMQFGRRIGLEKVINVLEGQVFE 185 (244)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred CHHHHHHHcChHHHHHHHHHhccc
Confidence 999999999999999999987543
No 96
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.85 E-value=2.5e-21 Score=199.49 Aligned_cols=140 Identities=23% Similarity=0.321 Sum_probs=127.6
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHhCCCCccccccCCCcHHHHHHhcCcHHHHHHHHhCCCCCCCCC-CCCCcHHHHHHH
Q psy13737 1132 SVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPT-KKGFTPLHIACH 1210 (1388)
Q Consensus 1132 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~~~~~~~-~~g~tpL~~A~~ 1210 (1388)
+..|.||||+|+..|+.++++.|++ |++++.+|..|+||||+|+..|+.+++++|+++|++++.++ ..|+||||+|+.
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~ 119 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG 119 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHh
Confidence 3468899999999999999999999 99999999999999999999999999999999999999998 889999999999
Q ss_pred hCCHHHHHHHHhCCCCcccCCCCCCCCcchhhhccccccccccCCCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCCCCC
Q psy13737 1211 YGQISMARLLLDQSANVTVPKNFPSRPIGILFILFPFIIGYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATNKG 1290 (1388)
Q Consensus 1211 ~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~g 1290 (1388)
.|+.+++++|+++|++++. .|..|+||||+|++.++. ..+
T Consensus 120 ~~~~~~v~~Ll~~ga~~~~------------------------~d~~g~tpl~~A~~~~~~----------------~~~ 159 (183)
T 3deo_A 120 YVRPEVVEALVELGADIEV------------------------EDERGLTALELAREILKT----------------TPK 159 (183)
T ss_dssp TTCHHHHHHHHHHTCCTTC------------------------CCTTSCCHHHHHHHHHHT----------------CCC
T ss_pred cCcHHHHHHHHHcCCCCcC------------------------CCCCCCCHHHHHHHhccC----------------ccc
Confidence 9999999999999998875 678899999999975432 356
Q ss_pred CcHHHHHHhcCcHHHHHHHHHc
Q psy13737 1291 FTPLHHSAQQGHSTIVALLLDR 1312 (1388)
Q Consensus 1291 ~tpL~~A~~~g~~~iv~~Ll~~ 1312 (1388)
.+||++|+..|+.+++++|.++
T Consensus 160 ~~~l~~a~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 160 GNPMQFGRRIGLEKVINVLEGQ 181 (183)
T ss_dssp CSHHHHHHHHHHHHHHHHHHTC
T ss_pred ccHHHHHHHcCHHHHHHHHHHh
Confidence 8899999999999999988765
No 97
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.85 E-value=2e-21 Score=185.19 Aligned_cols=117 Identities=26% Similarity=0.360 Sum_probs=105.9
Q ss_pred CCCCCChHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHH
Q psy13737 1255 TDQGFTPLHHSAQQGHSTIVALLLDRGASPNA-TNKGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACH 1333 (1388)
Q Consensus 1255 ~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~-~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~T~Lh~A~~ 1333 (1388)
+..|.||||+|+..|+.++++.|++.|++++. +..|+||||+|+..|+.+++++|++.|++++..+. .|+||||+|+.
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~-~g~tpL~~A~~ 82 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDK-HHITPLLSAVY 82 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCT-TSCCHHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCC-CCCCHHHHHHH
Confidence 45788999999999999999999999999987 55799999999999999999999999999998875 79999999999
Q ss_pred cCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHhCcHHH
Q psy13737 1334 YGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTI 1372 (1388)
Q Consensus 1334 ~~~~~~v~~Ll~~ga~~~~~d~~G~tpL~~A~~~g~~~~ 1372 (1388)
.|+.+++++|+++|++++.+|.+|+||||+|...+..++
T Consensus 83 ~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~l 121 (123)
T 3aaa_C 83 EGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAIKAL 121 (123)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCHHHHHH
T ss_pred cCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCHHHHHH
Confidence 999999999999999999999999999999965544443
No 98
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.85 E-value=9.3e-22 Score=210.43 Aligned_cols=133 Identities=23% Similarity=0.298 Sum_probs=114.5
Q ss_pred CCCCCCChHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCcHHHHHHhcCcHHHHHHHHHc-CCCCCCCCCCCCCcHHHHH
Q psy13737 1254 TTDQGFTPLHHSAQQGHSTIVALLLDRGASPNA-TNKGFTPLHHSAQQGHSTIVALLLDR-GASPNATNKTRGFTPLHIA 1331 (1388)
Q Consensus 1254 ~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~-~~~g~tpL~~A~~~g~~~iv~~Ll~~-g~~~~~~~~~~g~T~Lh~A 1331 (1388)
.+..|.||||+||..|+.++|++|++.|++++. +..|+||||+|+..|+.++|++|++. |++++..+. .|+||||+|
T Consensus 69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~-~g~tpL~~A 147 (222)
T 3ehr_A 69 QAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNK-LGDTALHAA 147 (222)
T ss_dssp HEEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCT-TSCCHHHHH
T ss_pred cccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCC-CCCCHHHHH
Confidence 456789999999999999999999999999986 66799999999999999999999999 999998875 799999999
Q ss_pred HHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHHCCCCCCCCC
Q psy13737 1332 CHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNATN 1387 (1388)
Q Consensus 1332 ~~~~~~~~v~~Ll~~ga~~~~~d~~G~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~ 1387 (1388)
+..|+.++|++|+++|++++.+|..|+||||+|+..|+.++++.|++.|+.++..|
T Consensus 148 ~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~ 203 (222)
T 3ehr_A 148 AWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSN 203 (222)
T ss_dssp HHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC-------------
T ss_pred HHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccc
Confidence 99999999999999999999999999999999999999999999999999998776
No 99
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.84 E-value=1.9e-20 Score=205.85 Aligned_cols=127 Identities=19% Similarity=0.234 Sum_probs=118.7
Q ss_pred CCChHHHHHHcCCHHHHHHHHHcCCCCCC-------CCCCCcHHHHHHhc---CcHHHHHHHHHcCCCCCCCCCCCCCcH
Q psy13737 1258 GFTPLHHSAQQGHSTIVALLLDRGASPNA-------TNKGFTPLHHSAQQ---GHSTIVALLLDRGASPNATNKTRGFTP 1327 (1388)
Q Consensus 1258 g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~-------~~~g~tpL~~A~~~---g~~~iv~~Ll~~g~~~~~~~~~~g~T~ 1327 (1388)
..++|+.|+..|+.+.+..+++.|++++. +..|+||||+|+.. |+.++|++|+++|++++..+. .|+||
T Consensus 130 ~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~-~g~Tp 208 (278)
T 1dcq_A 130 KLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTG-KGSTA 208 (278)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCT-TCCCH
T ss_pred hhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCC-CCCCH
Confidence 45799999999999999999999999653 45799999999999 899999999999999998875 79999
Q ss_pred HHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHHCCCCCCC
Q psy13737 1328 LHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNA 1385 (1388)
Q Consensus 1328 Lh~A~~~~~~~~v~~Ll~~ga~~~~~d~~G~tpL~~A~~~g~~~~v~~Ll~~ga~~~~ 1385 (1388)
||+|+..|+.++|++|+++|++++.+|.+|+||||+|++.|+.++|++|+++|+++..
T Consensus 209 Lh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~ 266 (278)
T 1dcq_A 209 LHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGRFN 266 (278)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTCCC
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999998654
No 100
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.84 E-value=5.3e-21 Score=212.72 Aligned_cols=140 Identities=23% Similarity=0.232 Sum_probs=111.5
Q ss_pred CCcHHHHHHhcCCHHHHHHHHhCCCCccc------cccCCCcHHHHHHhc---CcHHHHHHHHhCCCCCCCCCCCCCcHH
Q psy13737 1135 GFTPLHLSASEGHADMSAMLLEHGADVSH------AAKNGLTPLHLCAQE---DRVGVAELLLKNNAQVDTPTKKGFTPL 1205 (1388)
Q Consensus 1135 g~t~L~~A~~~~~~~~v~~Ll~~g~d~~~------~~~~g~t~Lh~A~~~---~~~~~~~~Ll~~g~~~~~~~~~g~tpL 1205 (1388)
+.++|+.|+..|+.+.++.|++.|++++. .+..|+||||+|+.. ++.+++++|+++|++++.+|..|+|||
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpL 230 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTAL 230 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHH
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHH
Confidence 45679999999999999999999999887 578888999998886 788888888888888888888888888
Q ss_pred HHHHHhCCHHHHHHHHhCCCCcccCCCCCCCCcchhhhccccccccccCCCCCCChHHHHHHcCCHHHHHHHHHcCCCCC
Q psy13737 1206 HIACHYGQISMARLLLDQSANVTVPKNFPSRPIGILFILFPFIIGYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPN 1285 (1388)
Q Consensus 1206 ~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~ 1285 (1388)
|+|+..|+.+++++|+++|++++. .|..|.||||+|+..|+.+++++|+++|++
T Consensus 231 h~A~~~g~~~~v~~Ll~~gad~~~------------------------~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~-- 284 (301)
T 2b0o_E 231 HYAALYNQPDCLKLLLKGRALVGT------------------------VNEAGETALDIARKKHHKECEELLEQAQAG-- 284 (301)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCCSC------------------------CCTTSCCHHHHHHHHTCHHHHHHHHHHHHH--
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCC------------------------cCCCCCCHHHHHHHcCCHHHHHHHHHhcCC--
Confidence 888888888888888888888765 667788888888888888888888888775
Q ss_pred CCCCCCcHHHHHHhcCcH
Q psy13737 1286 ATNKGFTPLHHSAQQGHS 1303 (1388)
Q Consensus 1286 ~~~~g~tpL~~A~~~g~~ 1303 (1388)
.|.||||+|+..|+.
T Consensus 285 ---~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 285 ---TFAFPLHVDYSWVIS 299 (301)
T ss_dssp ---TTSSCCC--------
T ss_pred ---CCCChhHHHHhcCCc
Confidence 477888888877763
No 101
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.82 E-value=3.6e-20 Score=165.98 Aligned_cols=93 Identities=46% Similarity=0.762 Sum_probs=86.9
Q ss_pred CCCcHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHhC
Q psy13737 1289 KGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQG 1368 (1388)
Q Consensus 1289 ~g~tpL~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~ga~~~~~d~~G~tpL~~A~~~g 1368 (1388)
+|+||||+|+..|+.+++++|++.|++++..+. .|+||||+|+..|+.+++++|+++|++++.+|.+|+||||+|++.|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~-~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~ 79 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDK-NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG 79 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence 489999999999999999999999999998875 7999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHCCCC
Q psy13737 1369 HSTIVALLLDRGAS 1382 (1388)
Q Consensus 1369 ~~~~v~~Ll~~ga~ 1382 (1388)
+.+++++|+++||+
T Consensus 80 ~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 80 HLEVVKLLLEAGAY 93 (93)
T ss_dssp CHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHcCCC
Confidence 99999999999986
No 102
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.82 E-value=1.9e-20 Score=178.39 Aligned_cols=118 Identities=26% Similarity=0.401 Sum_probs=107.6
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHhCCCCccccccCCCcHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHh
Q psy13737 1132 SVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHY 1211 (1388)
Q Consensus 1132 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~tpL~~A~~~ 1211 (1388)
+..|.||||+|+..|+.+++++|++.|++++..|..|+||||+|+..++.+++++|++.|++++.+|..|+||||+|+..
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~ 83 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYE 83 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHc
Confidence 45688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhCCCCcccCCCCCCCCcchhhhccccccccccCCCCCCChHHHHHHcCCHHH
Q psy13737 1212 GQISMARLLLDQSANVTVPKNFPSRPIGILFILFPFIIGYTNTTDQGFTPLHHSAQQGHSTI 1273 (1388)
Q Consensus 1212 g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~ 1273 (1388)
|+.+++++|+++|++++. .+..|+||||+|+..+..++
T Consensus 84 ~~~~~v~~Ll~~ga~~~~------------------------~~~~g~t~l~~A~~~~~~~l 121 (123)
T 3aaa_C 84 GHVSCVKLLLSKGADKTV------------------------KGPDGLTAFEATDNQAIKAL 121 (123)
T ss_dssp TCHHHHHHHHHTTCCTTC------------------------CCTTSCCHHHHCCCHHHHHH
T ss_pred CCHHHHHHHHHcCCCCCC------------------------cCCCCCCHHHHhCCHHHHHH
Confidence 999999999999999875 77899999999955444333
No 103
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.82 E-value=1.6e-20 Score=208.95 Aligned_cols=109 Identities=25% Similarity=0.223 Sum_probs=68.5
Q ss_pred CCCCCChHHHHHHc---CCHHHHHHHHHcCCCCCC-CCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCCCCcHHHH
Q psy13737 1255 TDQGFTPLHHSAQQ---GHSTIVALLLDRGASPNA-TNKGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHI 1330 (1388)
Q Consensus 1255 ~~~g~t~L~~Aa~~---g~~~~v~~Ll~~g~~~~~-~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~T~Lh~ 1330 (1388)
+..|+||||+|+.. |+.+++++|++.|++++. +..|+||||+|+..|+.++|++|+++|++++..+. .|+||||+
T Consensus 187 ~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~-~G~TpL~~ 265 (301)
T 2b0o_E 187 QAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNE-AGETALDI 265 (301)
T ss_dssp CSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCCSCCCT-TSCCHHHH
T ss_pred CCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCC-CCCCHHHH
Confidence 44566666666665 666666777766666665 44577777777777777777777777777766553 57777777
Q ss_pred HHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHhCcH
Q psy13737 1331 ACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHS 1370 (1388)
Q Consensus 1331 A~~~~~~~~v~~Ll~~ga~~~~~d~~G~tpL~~A~~~g~~ 1370 (1388)
|+..|+.+++++|+++|++ .|.||||+|+++|+.
T Consensus 266 A~~~~~~~iv~~Ll~~ga~------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 266 ARKKHHKECEELLEQAQAG------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp HHHHTCHHHHHHHHHHHHH------TTSSCCC--------
T ss_pred HHHcCCHHHHHHHHHhcCC------CCCChhHHHHhcCCc
Confidence 7777777777777777664 467777777777654
No 104
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.81 E-value=1.6e-19 Score=198.47 Aligned_cols=124 Identities=23% Similarity=0.334 Sum_probs=75.0
Q ss_pred CcHHHHHHhcCCHHHHHHHHhCCCCcc------ccccCCCcHHHHHHhc---CcHHHHHHHHhCCCCCCCCCCCCCcHHH
Q psy13737 1136 FTPLHLSASEGHADMSAMLLEHGADVS------HAAKNGLTPLHLCAQE---DRVGVAELLLKNNAQVDTPTKKGFTPLH 1206 (1388)
Q Consensus 1136 ~t~L~~A~~~~~~~~v~~Ll~~g~d~~------~~~~~g~t~Lh~A~~~---~~~~~~~~Ll~~g~~~~~~~~~g~tpL~ 1206 (1388)
.++|+.|+..|+.+.+..+++.|++++ ..+..|+||||+|+.. ++.+++++|+++|++++.+|..|+||||
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh 210 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALH 210 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHH
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHH
Confidence 356666666666666666666666633 3355566666666665 5566666666666666666666666666
Q ss_pred HHHHhCCHHHHHHHHhCCCCcccCCCCCCCCcchhhhccccccccccCCCCCCChHHHHHHcCCHHHHHHHHHcCCC
Q psy13737 1207 IACHYGQISMARLLLDQSANVTVPKNFPSRPIGILFILFPFIIGYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGAS 1283 (1388)
Q Consensus 1207 ~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~ 1283 (1388)
+|+..|+.++|++|+++|++++. .|..|+||||+|+..|+.+++++|+++|++
T Consensus 211 ~A~~~g~~~~v~~Ll~~gad~~~------------------------~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~ 263 (278)
T 1dcq_A 211 YCCLTDNAECLKLLLRGKASIEI------------------------ANESGETPLDIAKRLKHEHCEELLTQALSG 263 (278)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTC------------------------CCTTSCCHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred HHHHcCCHHHHHHHHHcCCCCCC------------------------ccCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 66666666666666666665543 445566666666666666666666665553
No 105
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.80 E-value=5.1e-20 Score=196.85 Aligned_cols=131 Identities=20% Similarity=0.242 Sum_probs=83.8
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHhCCCCccccccCCCcHHHHHHhcCcHHHHHHHHhC-CCCCCCCCCCCCcHHHHHHH
Q psy13737 1132 SVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKN-NAQVDTPTKKGFTPLHIACH 1210 (1388)
Q Consensus 1132 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~tpL~~A~~ 1210 (1388)
+..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|++. |++++.+|..|+||||+|+.
T Consensus 70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~ 149 (222)
T 3ehr_A 70 AESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAW 149 (222)
T ss_dssp EEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHH
T ss_pred ccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHH
Confidence 44566777777777777777777777777777777777777777777777777777776 77777777777777777777
Q ss_pred hCCHHHHHHHHhCCCCcccCCCCCCCCcchhhhccccccccccCCCCCCChHHHHHHcCCHHHHHHHHHcCCCCCC
Q psy13737 1211 YGQISMARLLLDQSANVTVPKNFPSRPIGILFILFPFIIGYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNA 1286 (1388)
Q Consensus 1211 ~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~ 1286 (1388)
.|+.+++++|+++|++++. .+..|+||||+|+..|+.++++.|++.|+....
T Consensus 150 ~~~~~~v~~Ll~~ga~~~~------------------------~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~ 201 (222)
T 3ehr_A 150 KGYADIVQLLLAKGARTDL------------------------RNIEKKLAFDMATNAACASLLKKKQGTDAVRTL 201 (222)
T ss_dssp HTCHHHHHHHHHHTCCSCC------------------------CCTTSCCHHHHCCSHHHHHHHC-----------
T ss_pred cCCHHHHHHHHHcCCCCcc------------------------ccCCCCCHHHHhcchhHHHHHHHHhccchhhhc
Confidence 7777777777776666654 455666677766666666666666666665543
No 106
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.79 E-value=2.5e-19 Score=215.71 Aligned_cols=127 Identities=23% Similarity=0.214 Sum_probs=115.9
Q ss_pred CChHHHHHHcCCHHHHHHHHHcCCCCCC-------CCCCCcHHHHHHh---cCcHHHHHHHHHcCCCCCCCCCCCCCcHH
Q psy13737 1259 FTPLHHSAQQGHSTIVALLLDRGASPNA-------TNKGFTPLHHSAQ---QGHSTIVALLLDRGASPNATNKTRGFTPL 1328 (1388)
Q Consensus 1259 ~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~-------~~~g~tpL~~A~~---~g~~~iv~~Ll~~g~~~~~~~~~~g~T~L 1328 (1388)
.+.||.|+..|+.++|+.|++.|++++. +..|+||||+|+. .|+.++|++|+++|+++|..+. .|+|||
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~-~g~TpL 211 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAA-DGNTAL 211 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCS-SSCCHH
T ss_pred HHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCC-CCCcHH
Confidence 3679999999999999999999999874 3479999999966 9999999999999999998875 799999
Q ss_pred HHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHhCcHHHHHHHHHCCCCCCCC
Q psy13737 1329 HIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNAT 1386 (1388)
Q Consensus 1329 h~A~~~~~~~~v~~Ll~~ga~~~~~d~~G~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~ 1386 (1388)
|+|+..|+.++|++|+++||+++.+|.+|+||||+|++.|+.+++++|+++||+++..
T Consensus 212 h~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~ 269 (497)
T 3lvq_E 212 HYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFAF 269 (497)
T ss_dssp HHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC-----
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999874
No 107
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.79 E-value=3.1e-19 Score=202.31 Aligned_cols=128 Identities=27% Similarity=0.304 Sum_probs=49.1
Q ss_pred CCCCChHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHc
Q psy13737 1256 DQGFTPLHHSAQQGHSTIVALLLDRGASPNA-TNKGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHY 1334 (1388)
Q Consensus 1256 ~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~-~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~T~Lh~A~~~ 1334 (1388)
..|.||||+|+..|+.++|++|+++|++++. +..|+||||+|+..|+.++|++|+++|++++..+. .|+||||+|+..
T Consensus 233 ~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~~~d~-~G~TpL~~A~~~ 311 (368)
T 3jue_A 233 QDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDS-EGRDPLTIAMET 311 (368)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHT
T ss_pred cCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHCcCCCCCcCC-CCCCHHHHHHHC
Confidence 3455555555555555555555555555554 33455555555555555555555555555554443 455555555555
Q ss_pred CCHHHHHHHHhCC---CCCCCCCCCCCcHHHHHHHhCc--HHHHHHHHHCCCCCC
Q psy13737 1335 GQISMARLLLDQS---ANVSCTTDQGFTPLHHSAQQGH--STIVALLLDRGASPN 1384 (1388)
Q Consensus 1335 ~~~~~v~~Ll~~g---a~~~~~d~~G~tpL~~A~~~g~--~~~v~~Ll~~ga~~~ 1384 (1388)
|+.+++++|++.+ ++....+..+.|+|+++..... .+-.+.|.+++.+++
T Consensus 312 g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~~~~~~~~~ekl~r~~~~~~ 366 (368)
T 3jue_A 312 ANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDFSLMASDDPEKLSRRSHDLH 366 (368)
T ss_dssp TCHHHHHHHHHHHC-----------------------------------------
T ss_pred CCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHHHHhhcCCCHHHHHhcCCCcC
Confidence 5555555555543 2222334445555555544332 233445555555444
No 108
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.78 E-value=4.8e-19 Score=200.72 Aligned_cols=125 Identities=27% Similarity=0.347 Sum_probs=86.6
Q ss_pred CCCcHHHHHHhc-CCHHHHHHHHhCCCCccccc--cCCCcHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH
Q psy13737 1134 AGFTPLHLSASE-GHADMSAMLLEHGADVSHAA--KNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACH 1210 (1388)
Q Consensus 1134 ~g~t~L~~A~~~-~~~~~v~~Ll~~g~d~~~~~--~~g~t~Lh~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~tpL~~A~~ 1210 (1388)
.+.||||.|+.. |+.++++.|+++|++++..+ ..|.||||+|+..++.+++++|+++|++++.+|..|+||||+|+.
T Consensus 198 ~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~ 277 (368)
T 3jue_A 198 HPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATI 277 (368)
T ss_dssp CHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence 445677777776 77777777777777777666 667777777777777777777777777777777777777777777
Q ss_pred hCCHHHHHHHHhCCCCcccCCCCCCCCcchhhhccccccccccCCCCCCChHHHHHHcCCHHHHHHHHHcCC
Q psy13737 1211 YGQISMARLLLDQSANVTVPKNFPSRPIGILFILFPFIIGYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGA 1282 (1388)
Q Consensus 1211 ~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~ 1282 (1388)
.|+.+++++|+++|++++. .|..|.||||+|+..|+.+++++|++.+.
T Consensus 278 ~g~~~~v~~LL~~Gad~~~------------------------~d~~G~TpL~~A~~~g~~~iv~lLl~~~~ 325 (368)
T 3jue_A 278 LGHTGLACLFLKRGADLGA------------------------RDSEGRDPLTIAMETANADIVTLLRLAKM 325 (368)
T ss_dssp HTCHHHHHHHHHTTCCTTC------------------------CCTTSCCHHHHHHHTTCHHHHHHHHHHHC
T ss_pred cCcHHHHHHHHHCcCCCCC------------------------cCCCCCCHHHHHHHCCCHHHHHHHHHcCC
Confidence 7777777777777666654 45566667777766666666666666553
No 109
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.78 E-value=1.1e-18 Score=156.31 Aligned_cols=93 Identities=46% Similarity=0.748 Sum_probs=89.5
Q ss_pred CCCcHHHHHHhcCCHHHHHHHHhCCCCccccccCCCcHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHhCC
Q psy13737 1134 AGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIACHYGQ 1213 (1388)
Q Consensus 1134 ~g~t~L~~A~~~~~~~~v~~Ll~~g~d~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~tpL~~A~~~g~ 1213 (1388)
+|+||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..++.+++++|+++|++++.+|..|+||||+|+..|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~ 80 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCC
Q psy13737 1214 ISMARLLLDQSAN 1226 (1388)
Q Consensus 1214 ~~~v~~Ll~~~~~ 1226 (1388)
.+++++|+++|++
T Consensus 81 ~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 81 LEVVKLLLEAGAY 93 (93)
T ss_dssp HHHHHHHHHTTCC
T ss_pred HHHHHHHHHcCCC
Confidence 9999999999974
No 110
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.77 E-value=1e-18 Score=210.32 Aligned_cols=135 Identities=23% Similarity=0.277 Sum_probs=117.0
Q ss_pred CcHHHHHHhcCCHHHHHHHHhCCCCcccc------ccCCCcHHHHHHh---cCcHHHHHHHHhCCCCCCCCCCCCCcHHH
Q psy13737 1136 FTPLHLSASEGHADMSAMLLEHGADVSHA------AKNGLTPLHLCAQ---EDRVGVAELLLKNNAQVDTPTKKGFTPLH 1206 (1388)
Q Consensus 1136 ~t~L~~A~~~~~~~~v~~Ll~~g~d~~~~------~~~g~t~Lh~A~~---~~~~~~~~~Ll~~g~~~~~~~~~g~tpL~ 1206 (1388)
.+.||.|+..|+.++++.|++.|+|++.. +..|+||||+|+. .|+.+++++|+++|+++|.+|..|+||||
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh 212 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALH 212 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHH
T ss_pred HHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHH
Confidence 36799999999999999999999999987 8899999999966 89999999999999999999999999999
Q ss_pred HHHHhCCHHHHHHHHhCCCCcccCCCCCCCCcchhhhccccccccccCCCCCCChHHHHHHcCCHHHHHHHHHcCCCCCC
Q psy13737 1207 IACHYGQISMARLLLDQSANVTVPKNFPSRPIGILFILFPFIIGYTNTTDQGFTPLHHSAQQGHSTIVALLLDRGASPNA 1286 (1388)
Q Consensus 1207 ~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~ 1286 (1388)
+|+..|+.++|++|+++|++++. .|..|+||||+|+..|+.+++++|+++|++++.
T Consensus 213 ~A~~~g~~~~v~~Ll~~ga~~~~------------------------~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~ 268 (497)
T 3lvq_E 213 YAALYNQPDCLKLLLKGRALVGT------------------------VNEAGETALDIARKKHHKECEELLEQAQAGTFA 268 (497)
T ss_dssp HHTTTTCHHHHHHHHHTCCCCSC------------------------CCTTCCCHHHHHHHTTCHHHHHHHHHTCC----
T ss_pred HHHHcCCHHHHHHHHHcCCCCCC------------------------cCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCC
Confidence 99999999999999999999876 788999999999999999999999999999875
Q ss_pred CCCCCcHHHHHHh
Q psy13737 1287 TNKGFTPLHHSAQ 1299 (1388)
Q Consensus 1287 ~~~g~tpL~~A~~ 1299 (1388)
||+|.+..
T Consensus 269 -----~~~h~~~~ 276 (497)
T 3lvq_E 269 -----FPLHVDYS 276 (497)
T ss_dssp -------------
T ss_pred -----Ccceeecc
Confidence 57777654
No 111
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.75 E-value=8.2e-19 Score=164.77 Aligned_cols=107 Identities=40% Similarity=0.579 Sum_probs=86.2
Q ss_pred CCCCCCChHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHH
Q psy13737 1254 TTDQGFTPLHHSAQQGHSTIVALLLDRGASPNA-TNKGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIAC 1332 (1388)
Q Consensus 1254 ~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~-~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~T~Lh~A~ 1332 (1388)
+|.+|+||||+|+..|+.+++++|++.|++++. +..|+||||+|+..|+.+++++|+++|++++..+. .|+||||+|+
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~-~g~tpl~~A~ 83 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSK-DGNTPEHLAK 83 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCT-TCCCTTHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCC-CCCCHHHHHH
Confidence 577888888888888888888888888888876 45688888888888888888888888888877664 6888888888
Q ss_pred HcCCHHHHHHHHhCCCCCCCCCCCCCcHH
Q psy13737 1333 HYGQISMARLLLDQSANVSCTTDQGFTPL 1361 (1388)
Q Consensus 1333 ~~~~~~~v~~Ll~~ga~~~~~d~~G~tpL 1361 (1388)
..|+.+++++|+++|++++.++..|.||-
T Consensus 84 ~~~~~~~~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 84 KNGHHEIVKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp TTTCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred HCCCHHHHHHHHHcCCCCCcCCccccccc
Confidence 88888888888888888888888888773
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.75 E-value=1.6e-18 Score=162.80 Aligned_cols=100 Identities=42% Similarity=0.662 Sum_probs=95.4
Q ss_pred CCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH
Q psy13737 1287 TNKGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHSAQ 1366 (1388)
Q Consensus 1287 ~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~ga~~~~~d~~G~tpL~~A~~ 1366 (1388)
+..|+||||+|+..|+.+++++|++.|++++..+. .|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|++
T Consensus 6 d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~-~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~~ 84 (115)
T 2l6b_A 6 SKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSK-DGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKK 84 (115)
T ss_dssp SCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCS-SSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHHT
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCC-CCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHH
Confidence 56799999999999999999999999999988774 79999999999999999999999999999999999999999999
Q ss_pred hCcHHHHHHHHHCCCCCCCCC
Q psy13737 1367 QGHSTIVALLLDRGASPNATN 1387 (1388)
Q Consensus 1367 ~g~~~~v~~Ll~~ga~~~~~~ 1387 (1388)
.|+.+++++|+++||++|..+
T Consensus 85 ~~~~~~~~~Ll~~ga~~n~~~ 105 (115)
T 2l6b_A 85 NGHHEIVKLLDAKGADVNARS 105 (115)
T ss_dssp TTCHHHHHHHHTTSSSHHHHS
T ss_pred CCCHHHHHHHHHcCCCCCcCC
Confidence 999999999999999998765
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.67 E-value=1.5e-16 Score=147.24 Aligned_cols=91 Identities=29% Similarity=0.457 Sum_probs=79.6
Q ss_pred CCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHH
Q psy13737 1285 NATNKGFTPLHHSAQQGHSTIVALLLDRGASPNATNKTRGFTPLHIACHYGQISMARLLLDQSANVSCTTDQGFTPLHHS 1364 (1388)
Q Consensus 1285 ~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~ga~~~~~d~~G~tpL~~A 1364 (1388)
+.+.+|+||||+|+..|+.+++++|++.|++++..+. .|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|
T Consensus 19 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~-~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A 97 (110)
T 2zgd_A 19 HMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDK-NGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDIS 97 (110)
T ss_dssp ---CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred ccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHH
Confidence 3466788999999999999999999999998887764 799999999999999999999999999999999999999999
Q ss_pred HHhCcHHHHHHH
Q psy13737 1365 AQQGHSTIVALL 1376 (1388)
Q Consensus 1365 ~~~g~~~~v~~L 1376 (1388)
++.|+.+++++|
T Consensus 98 ~~~~~~~~~~~L 109 (110)
T 2zgd_A 98 IDNGNEDLAEIL 109 (110)
T ss_dssp HHHTCHHHHHHH
T ss_pred HHcCCHHHHHHh
Confidence 999999999887
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.62 E-value=1.2e-15 Score=141.06 Aligned_cols=92 Identities=34% Similarity=0.445 Sum_probs=86.3
Q ss_pred CCCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCccccccCCCcHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHH
Q psy13737 1129 NAESVAGFTPLHLSASEGHADMSAMLLEHGADVSHAAKNGLTPLHLCAQEDRVGVAELLLKNNAQVDTPTKKGFTPLHIA 1208 (1388)
Q Consensus 1129 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~tpL~~A 1208 (1388)
...+.+|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..++.+++++|+++|++++.+|..|+||||+|
T Consensus 18 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A 97 (110)
T 2zgd_A 18 SHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDIS 97 (110)
T ss_dssp ----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred cccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHH
Confidence 44677899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCHHHHHHH
Q psy13737 1209 CHYGQISMARLL 1220 (1388)
Q Consensus 1209 ~~~g~~~~v~~L 1220 (1388)
+..|+.+++++|
T Consensus 98 ~~~~~~~~~~~L 109 (110)
T 2zgd_A 98 IDNGNEDLAEIL 109 (110)
T ss_dssp HHHTCHHHHHHH
T ss_pred HHcCCHHHHHHh
Confidence 999999999987
No 115
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=21.49 E-value=1.9e+02 Score=33.57 Aligned_cols=143 Identities=13% Similarity=0.188 Sum_probs=0.0
Q ss_pred HHHHHHhcCC----HHHHHHHHhCCCCcccccCCCccHHHHHHhcCh-------------HHHHHHHHhcCCCccccccc
Q psy13737 454 MLHIACKKNR----IKVVELLLKHGASIEATTEVREPMLHIACKKNR-------------IKVVELLLKHGASIEATTEV 516 (1388)
Q Consensus 454 ~l~~A~~~g~----~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~-------------~~iv~~Ll~~~~~~~~~~~~ 516 (1388)
.|...++.|+ +++.+.+.+.|..++...- .+++...+..+. .++.+-+.+.|..++....
T Consensus 32 ~id~c~k~G~~~~A~~lf~~M~~~Gv~pd~~ty--n~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~G~~Pd~~ty- 108 (501)
T 4g26_A 32 KLDMCSKKGDVLEALRLYDEARRNGVQLSQYHY--NVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVDKVVPNEATF- 108 (501)
T ss_dssp HHHHTTTSCCHHHHHHHHHHHHHHTCCCCHHHH--HHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHTTCCCCHHHH-
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHcCCCCCHhHH--HHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHhCCCCCHHHH-
Q ss_pred CcchhHHHHhhCc----HHHHHHHHHcCCcccccCCCCCcHHHHHHHcCc----HHHHHHHHhcCCCccccCCCCccHHH
Q psy13737 517 REPMLHIACKKNR----IKVVELLLKHGASIEATTEVREPMLHIACKKNR----IKVVELLLKHGASIEATTEVREPMLH 588 (1388)
Q Consensus 517 ~~~~l~~A~~~g~----~~~v~~L~~~g~~~~~~~~~~~~~L~~A~~~g~----~~iv~~Ll~~g~~~~~~~~~~~t~L~ 588 (1388)
.+.+...++.|+ .++++.+.+.|..++.... .+.|...++.|+ .++.+.+.+.|..++.. ...+.+.
T Consensus 109 -n~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~ty--n~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd~~--ty~~Li~ 183 (501)
T 4g26_A 109 -TNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSY--GPALFGFCRKGDADKAYEVDAHMVESEVVPEEP--ELAALLK 183 (501)
T ss_dssp -HHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHH--HHHHHHHHHTTCHHHHHHHHHHHHHTTCCCCHH--HHHHHHH
T ss_pred -HHHHHHHHhcCCHHHHHHHHHHHHHcCCCCcccee--hHHHHHHHHCCCHHHHHHHHHHHHhcCCCCCHH--HHHHHHH
Q ss_pred HHHHhCCHHHHHHHHh
Q psy13737 589 IACKKNRIKVVELLLK 604 (1388)
Q Consensus 589 ~A~~~g~~~~v~~Ll~ 604 (1388)
..+..|+.+-+..+++
T Consensus 184 ~~~~~g~~d~A~~ll~ 199 (501)
T 4g26_A 184 VSMDTKNADKVYKTLQ 199 (501)
T ss_dssp HHHHTTCHHHHHHHHH
T ss_pred HHhhCCCHHHHHHHHH
Done!