BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13740
(185 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q24117|DYL1_DROME Dynein light chain 1, cytoplasmic OS=Drosophila melanogaster GN=ctp
PE=1 SV=1
Length = 89
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 63/89 (70%)
Query: 40 MTDLPVAIKKVDMTKKMQTYVIRAAKVAFEKCTSQEEIAAYLKNRFNRRFEPMWTCIVGT 99
M+D IK DM+++MQ + A A EK +++IAAY+K F++++ P W CIVG
Sbjct: 1 MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGR 60
Query: 100 NFGAYVSYESRRFIYFYLGQTGVLLFRNG 128
NFG+YV++E+R FIYFYLGQ +LLF++G
Sbjct: 61 NFGSYVTHETRHFIYFYLGQVAILLFKSG 89
>sp|Q9UR05|DYL1_SCHPO Dynein light chain 1, cytoplasmic OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=dlc2 PE=3 SV=1
Length = 85
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 61/83 (73%)
Query: 46 AIKKVDMTKKMQTYVIRAAKVAFEKCTSQEEIAAYLKNRFNRRFEPMWTCIVGTNFGAYV 105
IK VDM++KMQ I AA A EK T +++IAA++K F+++F P W CIVG NFG++V
Sbjct: 3 VIKAVDMSEKMQQEAIHAAVQAMEKFTIEKDIAAFIKREFDKKFSPTWHCIVGRNFGSFV 62
Query: 106 SYESRRFIYFYLGQTGVLLFRNG 128
++ESR FIYFYLG LLF++G
Sbjct: 63 THESRHFIYFYLGTVAFLLFKSG 85
>sp|O96860|DYL2_DROME Dynein light chain 2, cytoplasmic OS=Drosophila melanogaster
GN=Cdlc2 PE=3 SV=1
Length = 89
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 63/89 (70%)
Query: 40 MTDLPVAIKKVDMTKKMQTYVIRAAKVAFEKCTSQEEIAAYLKNRFNRRFEPMWTCIVGT 99
M+D IK DM+++MQ + A A EK +++IAA++K F++++ P W CIVG
Sbjct: 1 MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAFIKKEFDKKYNPTWHCIVGR 60
Query: 100 NFGAYVSYESRRFIYFYLGQTGVLLFRNG 128
NFG+YV++E+R FIYFYLGQ +LLF++G
Sbjct: 61 NFGSYVTHETRHFIYFYLGQVAILLFKSG 89
>sp|Q22799|DYL1_CAEEL Dynein light chain 1, cytoplasmic OS=Caenorhabditis elegans
GN=dlc-1 PE=1 SV=1
Length = 89
Score = 100 bits (250), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%)
Query: 40 MTDLPVAIKKVDMTKKMQTYVIRAAKVAFEKCTSQEEIAAYLKNRFNRRFEPMWTCIVGT 99
M D IK DM+ MQ I A A EK +++IAAY+K F++++ P W CIVG
Sbjct: 1 MVDRKAVIKNADMSDDMQQDAIDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGR 60
Query: 100 NFGAYVSYESRRFIYFYLGQTGVLLFRNG 128
NFG+YV++E++ FIYFYLGQ +LLF++G
Sbjct: 61 NFGSYVTHETKHFIYFYLGQVAILLFKSG 89
>sp|Q78P75|DYL2_RAT Dynein light chain 2, cytoplasmic OS=Rattus norvegicus GN=Dynll2
PE=1 SV=1
Length = 89
Score = 100 bits (250), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 62/89 (69%)
Query: 40 MTDLPVAIKKVDMTKKMQTYVIRAAKVAFEKCTSQEEIAAYLKNRFNRRFEPMWTCIVGT 99
M+D IK DM++ MQ + A A EK +++IAAY+K F++++ P W CIVG
Sbjct: 1 MSDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGR 60
Query: 100 NFGAYVSYESRRFIYFYLGQTGVLLFRNG 128
NFG+YV++E++ FIYFYLGQ +LLF++G
Sbjct: 61 NFGSYVTHETKHFIYFYLGQVAILLFKSG 89
>sp|Q9D0M5|DYL2_MOUSE Dynein light chain 2, cytoplasmic OS=Mus musculus GN=Dynll2 PE=1
SV=1
Length = 89
Score = 100 bits (250), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 62/89 (69%)
Query: 40 MTDLPVAIKKVDMTKKMQTYVIRAAKVAFEKCTSQEEIAAYLKNRFNRRFEPMWTCIVGT 99
M+D IK DM++ MQ + A A EK +++IAAY+K F++++ P W CIVG
Sbjct: 1 MSDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGR 60
Query: 100 NFGAYVSYESRRFIYFYLGQTGVLLFRNG 128
NFG+YV++E++ FIYFYLGQ +LLF++G
Sbjct: 61 NFGSYVTHETKHFIYFYLGQVAILLFKSG 89
>sp|Q96FJ2|DYL2_HUMAN Dynein light chain 2, cytoplasmic OS=Homo sapiens GN=DYNLL2 PE=1
SV=1
Length = 89
Score = 100 bits (250), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 62/89 (69%)
Query: 40 MTDLPVAIKKVDMTKKMQTYVIRAAKVAFEKCTSQEEIAAYLKNRFNRRFEPMWTCIVGT 99
M+D IK DM++ MQ + A A EK +++IAAY+K F++++ P W CIVG
Sbjct: 1 MSDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGR 60
Query: 100 NFGAYVSYESRRFIYFYLGQTGVLLFRNG 128
NFG+YV++E++ FIYFYLGQ +LLF++G
Sbjct: 61 NFGSYVTHETKHFIYFYLGQVAILLFKSG 89
>sp|Q3MHR3|DYL2_BOVIN Dynein light chain 2, cytoplasmic OS=Bos taurus GN=DYNLL2 PE=3 SV=1
Length = 89
Score = 100 bits (250), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 62/89 (69%)
Query: 40 MTDLPVAIKKVDMTKKMQTYVIRAAKVAFEKCTSQEEIAAYLKNRFNRRFEPMWTCIVGT 99
M+D IK DM++ MQ + A A EK +++IAAY+K F++++ P W CIVG
Sbjct: 1 MSDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGR 60
Query: 100 NFGAYVSYESRRFIYFYLGQTGVLLFRNG 128
NFG+YV++E++ FIYFYLGQ +LLF++G
Sbjct: 61 NFGSYVTHETKHFIYFYLGQVAILLFKSG 89
>sp|P63170|DYL1_RAT Dynein light chain 1, cytoplasmic OS=Rattus norvegicus GN=Dynll1
PE=1 SV=1
Length = 89
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 62/89 (69%)
Query: 40 MTDLPVAIKKVDMTKKMQTYVIRAAKVAFEKCTSQEEIAAYLKNRFNRRFEPMWTCIVGT 99
M D IK DM+++MQ + A A EK +++IAA++K F++++ P W CIVG
Sbjct: 1 MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGR 60
Query: 100 NFGAYVSYESRRFIYFYLGQTGVLLFRNG 128
NFG+YV++E++ FIYFYLGQ +LLF++G
Sbjct: 61 NFGSYVTHETKHFIYFYLGQVAILLFKSG 89
>sp|P63169|DYL1_RABIT Dynein light chain 1, cytoplasmic OS=Oryctolagus cuniculus
GN=DYNLL1 PE=1 SV=1
Length = 89
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 62/89 (69%)
Query: 40 MTDLPVAIKKVDMTKKMQTYVIRAAKVAFEKCTSQEEIAAYLKNRFNRRFEPMWTCIVGT 99
M D IK DM+++MQ + A A EK +++IAA++K F++++ P W CIVG
Sbjct: 1 MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGR 60
Query: 100 NFGAYVSYESRRFIYFYLGQTGVLLFRNG 128
NFG+YV++E++ FIYFYLGQ +LLF++G
Sbjct: 61 NFGSYVTHETKHFIYFYLGQVAILLFKSG 89
>sp|P63168|DYL1_MOUSE Dynein light chain 1, cytoplasmic OS=Mus musculus GN=Dynll1 PE=1
SV=1
Length = 89
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 62/89 (69%)
Query: 40 MTDLPVAIKKVDMTKKMQTYVIRAAKVAFEKCTSQEEIAAYLKNRFNRRFEPMWTCIVGT 99
M D IK DM+++MQ + A A EK +++IAA++K F++++ P W CIVG
Sbjct: 1 MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGR 60
Query: 100 NFGAYVSYESRRFIYFYLGQTGVLLFRNG 128
NFG+YV++E++ FIYFYLGQ +LLF++G
Sbjct: 61 NFGSYVTHETKHFIYFYLGQVAILLFKSG 89
>sp|P61273|DYL1_MACFA Dynein light chain 1, cytoplasmic OS=Macaca fascicularis GN=DYNLL1
PE=3 SV=1
Length = 89
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 62/89 (69%)
Query: 40 MTDLPVAIKKVDMTKKMQTYVIRAAKVAFEKCTSQEEIAAYLKNRFNRRFEPMWTCIVGT 99
M D IK DM+++MQ + A A EK +++IAA++K F++++ P W CIVG
Sbjct: 1 MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGR 60
Query: 100 NFGAYVSYESRRFIYFYLGQTGVLLFRNG 128
NFG+YV++E++ FIYFYLGQ +LLF++G
Sbjct: 61 NFGSYVTHETKHFIYFYLGQVAILLFKSG 89
>sp|P63167|DYL1_HUMAN Dynein light chain 1, cytoplasmic OS=Homo sapiens GN=DYNLL1 PE=1
SV=1
Length = 89
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 62/89 (69%)
Query: 40 MTDLPVAIKKVDMTKKMQTYVIRAAKVAFEKCTSQEEIAAYLKNRFNRRFEPMWTCIVGT 99
M D IK DM+++MQ + A A EK +++IAA++K F++++ P W CIVG
Sbjct: 1 MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGR 60
Query: 100 NFGAYVSYESRRFIYFYLGQTGVLLFRNG 128
NFG+YV++E++ FIYFYLGQ +LLF++G
Sbjct: 61 NFGSYVTHETKHFIYFYLGQVAILLFKSG 89
>sp|P61285|DYL1_BOVIN Dynein light chain 1, cytoplasmic OS=Bos taurus GN=DYNLL1 PE=1 SV=1
Length = 89
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 62/89 (69%)
Query: 40 MTDLPVAIKKVDMTKKMQTYVIRAAKVAFEKCTSQEEIAAYLKNRFNRRFEPMWTCIVGT 99
M D IK DM+++MQ + A A EK +++IAA++K F++++ P W CIVG
Sbjct: 1 MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGR 60
Query: 100 NFGAYVSYESRRFIYFYLGQTGVLLFRNG 128
NFG+YV++E++ FIYFYLGQ +LLF++G
Sbjct: 61 NFGSYVTHETKHFIYFYLGQVAILLFKSG 89
>sp|O02414|DYL1_HELCR Dynein light chain LC6, flagellar outer arm OS=Heliocidaris
crassispina PE=3 SV=1
Length = 89
Score = 98.2 bits (243), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 61/89 (68%)
Query: 40 MTDLPVAIKKVDMTKKMQTYVIRAAKVAFEKCTSQEEIAAYLKNRFNRRFEPMWTCIVGT 99
M++ IK DM + MQ + A A EK +++IAAY+K F++++ P W CIVG
Sbjct: 1 MSERKAVIKNADMPEDMQQDAVDCATQALEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGR 60
Query: 100 NFGAYVSYESRRFIYFYLGQTGVLLFRNG 128
NFG+YV++E++ FIYFYLGQ VLLF++G
Sbjct: 61 NFGSYVTHETKHFIYFYLGQVAVLLFKSG 89
>sp|Q39580|DYL1_CHLRE Dynein 8 kDa light chain, flagellar outer arm OS=Chlamydomonas
reinhardtii PE=1 SV=1
Length = 91
Score = 98.2 bits (243), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 59/82 (71%)
Query: 47 IKKVDMTKKMQTYVIRAAKVAFEKCTSQEEIAAYLKNRFNRRFEPMWTCIVGTNFGAYVS 106
IK DM+++MQ + A A EK +++IAAY+K F+R+ P W CIVG NFG+YV+
Sbjct: 10 IKNADMSEEMQADAVDCATQALEKYNIEKDIAAYIKKEFDRKHNPTWHCIVGRNFGSYVT 69
Query: 107 YESRRFIYFYLGQTGVLLFRNG 128
+E++ FIYFYLGQ +LLF++G
Sbjct: 70 HETKHFIYFYLGQVAILLFKSG 91
>sp|Q94748|DYL2_SCHMA Probable dynein light chain OS=Schistosoma mansoni PE=3 SV=1
Length = 89
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 58/89 (65%)
Query: 40 MTDLPVAIKKVDMTKKMQTYVIRAAKVAFEKCTSQEEIAAYLKNRFNRRFEPMWTCIVGT 99
M + IK DM + MQ + A A +K ++++AAY+K F+R++ P W CIVG
Sbjct: 1 MGERKAVIKNADMHEDMQETAVHTAAAALDKYEIEKDVAAYIKKEFDRKYNPNWHCIVGK 60
Query: 100 NFGAYVSYESRRFIYFYLGQTGVLLFRNG 128
+FG+YV++E++ FIYFYL + LLF++G
Sbjct: 61 HFGSYVTHETQHFIYFYLQERAFLLFKSG 89
>sp|Q94758|DYL1_SCHMA Dynein light chain OS=Schistosoma mansoni GN=DLC PE=1 SV=1
Length = 89
Score = 87.8 bits (216), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 58/89 (65%)
Query: 40 MTDLPVAIKKVDMTKKMQTYVIRAAKVAFEKCTSQEEIAAYLKNRFNRRFEPMWTCIVGT 99
M++ IK DM+++MQ I A A +K +++IAA +K F+R++ P W CIVG
Sbjct: 1 MSERKAVIKNADMSEEMQEDAIHIAAGAIDKHDLEKDIAANIKKDFDRKYHPTWHCIVGR 60
Query: 100 NFGAYVSYESRRFIYFYLGQTGVLLFRNG 128
+FG+YV++E+ FIYFYL LLF++G
Sbjct: 61 HFGSYVTHETHNFIYFYLDDRAFLLFKSG 89
>sp|O94111|DYL1_EMENI Dynein light chain, cytoplasmic OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=nudG
PE=3 SV=1
Length = 94
Score = 83.6 bits (205), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 54/85 (63%)
Query: 43 LPVAIKKVDMTKKMQTYVIRAAKVAFEKCTSQEEIAAYLKNRFNRRFEPMWTCIVGTNFG 102
L IK VDM++ MQ + A A EK +++IA Y+K F+ R W C+VG NFG
Sbjct: 9 LEPQIKSVDMSEDMQQEAVEVAIEAMEKYHIEKDIAQYIKREFDSRKGATWHCVVGRNFG 68
Query: 103 AYVSYESRRFIYFYLGQTGVLLFRN 127
++V++E++ FIYFYLG +LLF+
Sbjct: 69 SFVTHETKHFIYFYLGHCAILLFKT 93
>sp|Q86A88|DYL_DICDI Dynein light chain, cytoplasmic OS=Dictyostelium discoideum GN=dlcB
PE=3 SV=1
Length = 91
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%)
Query: 45 VAIKKVDMTKKMQTYVIRAAKVAFEKCTSQEEIAAYLKNRFNRRFEPMWTCIVGTNFGAY 104
+ +K DM MQ AFE+ + +IA +K F++++ P W CIVG +FG++
Sbjct: 8 INVKNADMPDFMQQDATECTIKAFEETNIERDIAMIIKKEFDKKYSPTWHCIVGKSFGSF 67
Query: 105 VSYESRRFIYFYLGQTGVLLFRNG 128
V++E++ FIYF + + VLLF+ G
Sbjct: 68 VTHETKNFIYFNINKHSVLLFKAG 91
>sp|Q6FUJ0|DYL1_CANGA Dynein light chain 1, cytoplasmic OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=DYN2 PE=3 SV=1
Length = 86
Score = 70.1 bits (170), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 51/83 (61%)
Query: 45 VAIKKVDMTKKMQTYVIRAAKVAFEKCTSQEEIAAYLKNRFNRRFEPMWTCIVGTNFGAY 104
V +K DM +MQ V R A+ A + T + EIA+ +K + R+ W IVG +FG+Y
Sbjct: 4 VIVKASDMGDEMQQEVFRIAEEAMREHTLEREIASVIKKEMDSRYGHTWHVIVGRSFGSY 63
Query: 105 VSYESRRFIYFYLGQTGVLLFRN 127
V++E +F+YFY+G +L+F+
Sbjct: 64 VTHEKGKFVYFYVGPLALLVFKT 86
>sp|Q6BZF8|DYL1_DEBHA Dynein light chain 1, cytoplasmic OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=DYN2 PE=3 SV=1
Length = 91
Score = 66.6 bits (161), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 49/82 (59%)
Query: 47 IKKVDMTKKMQTYVIRAAKVAFEKCTSQEEIAAYLKNRFNRRFEPMWTCIVGTNFGAYVS 106
+K D+ ++MQT + + A +++IA YLK ++ + W IVG +FG+YV+
Sbjct: 10 LKASDLPEEMQTRIFELSNEAVSNYKIEKDIATYLKKELDQLYGATWHVIVGKSFGSYVT 69
Query: 107 YESRRFIYFYLGQTGVLLFRNG 128
+E F YFY+GQ L+F++G
Sbjct: 70 HEQGFFTYFYIGQLAFLIFKSG 91
>sp|Q759T0|DYL1_ASHGO Dynein light chain 1, cytoplasmic OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DYN2
PE=3 SV=1
Length = 88
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%)
Query: 44 PVAIKKVDMTKKMQTYVIRAAKVAFEKCTSQEEIAAYLKNRFNRRFEPMWTCIVGTNFGA 103
P +K D+T +++ + + A E+ + E+AAY+K + + W IVG NFG+
Sbjct: 4 PAILKASDITDELRDEIFGISVQAVEQFQLEREVAAYIKKELDSKHGQTWHVIVGKNFGS 63
Query: 104 YVSYESRRFIYFYLGQTGVLLFRNG 128
YV++E FIYFY+G L+F+
Sbjct: 64 YVTHEKGHFIYFYIGPLAFLVFKTA 88
>sp|Q02647|DYL1_YEAST Dynein light chain 1, cytoplasmic OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=DYN2 PE=1 SV=1
Length = 92
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 49/82 (59%)
Query: 47 IKKVDMTKKMQTYVIRAAKVAFEKCTSQEEIAAYLKNRFNRRFEPMWTCIVGTNFGAYVS 106
+K D+T K++ ++ +K A +K + +IA +K + + ++ W IVG NFG+YV+
Sbjct: 11 VKASDITDKLKEDILTISKDALDKYQLERDIAGTVKKQLDVKYGNTWHVIVGKNFGSYVT 70
Query: 107 YESRRFIYFYLGQTGVLLFRNG 128
+E F+YFY+G L+F+
Sbjct: 71 HEKGHFVYFYIGPLAFLVFKTA 92
>sp|Q6CWX4|DYL1_KLULA Dynein light chain 1, cytoplasmic OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=DYN2 PE=3 SV=1
Length = 87
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 44 PVAIKKVDMTKKMQTYVIRAAKVAFEKCTSQEEIAAYLKNRFNRRFEPMWTCIVGTNFGA 103
PV +K D+T +++ + + A + EIAAY+K + + W IVG NFG+
Sbjct: 4 PV-LKASDITDELRDEIFELSSNATANYKLEREIAAYIKKQLDVSQGETWHVIVGKNFGS 62
Query: 104 YVSYESRRFIYFYLGQTGVLLFRNG 128
YV++E F+YFY+G L+F+
Sbjct: 63 YVTHEKGYFVYFYIGPLAFLVFKTA 87
>sp|Q21557|DYL2_CAEEL Probable dynein light chain 2, cytoplasmic OS=Caenorhabditis
elegans GN=dlc-2 PE=3 SV=2
Length = 90
Score = 50.4 bits (119), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 40 MTDLPVAIKKVDMTKKMQTYVIRAAKVAFEKCTSQEEIAAYLKNRFNRRFEPMWTCIVGT 99
M++ + +K+ DM + VI + A +++AA++K +++F W I G
Sbjct: 1 MSEEKIEVKETDMEDPQRDMVISVVREAQRLYNIDKDVAAFVKEELDKKFGATWHVICGK 60
Query: 100 NFGAYVSYESRRFIYFYLGQTGVLLFRNG 128
FG+ VSYE FI + V++++ G
Sbjct: 61 CFGSRVSYEMGHFILLKCNKVNVMIYKCG 89
>sp|Q39579|DYL2_CHLRE Dynein 11 kDa light chain, flagellar outer arm OS=Chlamydomonas
reinhardtii PE=1 SV=1
Length = 120
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 50/83 (60%), Gaps = 7/83 (8%)
Query: 52 MTKKMQTYVIRAAKVAFEKCTSQEEIAAYLKNRFNRRF-------EPMWTCIVGTNFGAY 104
M + + ++ A +A +K ++IA Y+K+ +++++ E ++ CIVG +F +
Sbjct: 28 MPESFEQDAVQIALIAVDKYRQLKDIAFYIKHEYDKKYPGSGKATEGVYHCIVGKSFASA 87
Query: 105 VSYESRRFIYFYLGQTGVLLFRN 127
VS+E+R+FI+ + V+L+++
Sbjct: 88 VSHETRQFIHMKVDTYHVILWKS 110
>sp|A4F4L4|DNAL4_PIG Dynein light chain 4, axonemal OS=Sus scrofa GN=DNAL4 PE=3 SV=1
Length = 105
Score = 43.5 bits (101), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 47 IKKVDMTKKMQTYVIRAAKVAFEKCTSQEEIAA-YLKNRFNRRFEPMWTCIVGTNFGAYV 105
++ DM ++M+ + A EK ++ E AA +K +++F W ++G FG +
Sbjct: 22 VRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFGSSWHVVIGEGFGFEI 81
Query: 106 SYESRRFIYFYLGQT 120
++E + +Y Y G T
Sbjct: 82 THEVKNLLYLYFGGT 96
>sp|O96015|DNAL4_HUMAN Dynein light chain 4, axonemal OS=Homo sapiens GN=DNAL4 PE=2 SV=1
Length = 105
Score = 43.5 bits (101), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 47 IKKVDMTKKMQTYVIRAAKVAFEKCTSQEEIAA-YLKNRFNRRFEPMWTCIVGTNFGAYV 105
++ DM ++M+ + A EK ++ E AA +K +++F W ++G FG +
Sbjct: 22 VRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFGSSWHVVIGEGFGFEI 81
Query: 106 SYESRRFIYFYLGQT 120
++E + +Y Y G T
Sbjct: 82 THEVKNLLYLYFGGT 96
>sp|Q32KN5|DNAL4_BOVIN Dynein light chain 4, axonemal OS=Bos taurus GN=DNAL4 PE=3 SV=1
Length = 105
Score = 43.5 bits (101), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 47 IKKVDMTKKMQTYVIRAAKVAFEKCTSQEEIAA-YLKNRFNRRFEPMWTCIVGTNFGAYV 105
++ DM ++M+ + A EK ++ E AA +K +++F W ++G FG +
Sbjct: 22 VRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFGSSWHVVIGEGFGFEI 81
Query: 106 SYESRRFIYFYLGQT 120
++E + +Y Y G T
Sbjct: 82 THEVKNLLYLYFGGT 96
>sp|Q9DCM4|DNAL4_MOUSE Dynein light chain 4, axonemal OS=Mus musculus GN=Dnal4 PE=2 SV=2
Length = 105
Score = 43.5 bits (101), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 47 IKKVDMTKKMQTYVIRAAKVAFEKCTSQEEIAA-YLKNRFNRRFEPMWTCIVGTNFGAYV 105
++ DM ++M+ + A EK ++ E AA +K +++F W ++G FG +
Sbjct: 22 VRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFGSSWHVVIGEGFGFEI 81
Query: 106 SYESRRFIYFYLGQT 120
++E + +Y Y G T
Sbjct: 82 THEVKNLLYLYFGGT 96
>sp|A9KCP2|MIAB_COXBN (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Coxiella burnetii (strain Dugway 5J108-111) GN=miaB
PE=3 SV=1
Length = 439
Score = 33.9 bits (76), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 29/56 (51%)
Query: 22 HSFVYFYFSQKDTPQGTLMTDLPVAIKKVDMTKKMQTYVIRAAKVAFEKCTSQEEI 77
HSF + Y + TP L D+P+A+KK + ++AA+++ +Q+ I
Sbjct: 331 HSFSFIYSPRPGTPAAQLPDDVPMAVKKERLAILQNRINVKAAEISQSMVGTQQRI 386
>sp|Q83DX3|MIAB_COXBU (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Coxiella burnetii (strain RSA 493 / Nine Mile phase
I) GN=miaB PE=3 SV=1
Length = 439
Score = 32.3 bits (72), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 39/99 (39%), Gaps = 26/99 (26%)
Query: 22 HSFVYFYFSQKDTPQGTLMTDLPVAIKKVDMTKKMQTYVIRAAKVAFEKCTSQEEIAAYL 81
HSF + Y + TP L D+P+A+KK E A L
Sbjct: 331 HSFSFIYSPRPGTPAAQLPDDVPMAVKK--------------------------ERLAIL 364
Query: 82 KNRFNRRFEPMWTCIVGTNFGAYVSYESRRFIYFYLGQT 120
+NR N + + +VGT V+ S+++ G+T
Sbjct: 365 QNRINAKAAEISQSMVGTQQRILVTGPSKKYPDQLSGRT 403
>sp|A9NC58|MIAB_COXBR (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Coxiella burnetii (strain RSA 331 / Henzerling II)
GN=miaB PE=3 SV=1
Length = 439
Score = 32.3 bits (72), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 39/99 (39%), Gaps = 26/99 (26%)
Query: 22 HSFVYFYFSQKDTPQGTLMTDLPVAIKKVDMTKKMQTYVIRAAKVAFEKCTSQEEIAAYL 81
HSF + Y + TP L D+P+A+KK E A L
Sbjct: 331 HSFSFIYSPRPGTPAAQLPDDVPMAVKK--------------------------ERLAIL 364
Query: 82 KNRFNRRFEPMWTCIVGTNFGAYVSYESRRFIYFYLGQT 120
+NR N + + +VGT V+ S+++ G+T
Sbjct: 365 QNRINAKAAEISQSMVGTQQRILVTGPSKKYPDQLSGRT 403
>sp|B6J1A4|MIAB_COXB2 (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Coxiella burnetii (strain CbuG_Q212) GN=miaB PE=3
SV=1
Length = 439
Score = 32.3 bits (72), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 39/99 (39%), Gaps = 26/99 (26%)
Query: 22 HSFVYFYFSQKDTPQGTLMTDLPVAIKKVDMTKKMQTYVIRAAKVAFEKCTSQEEIAAYL 81
HSF + Y + TP L D+P+A+KK E A L
Sbjct: 331 HSFSFIYSPRPGTPAAQLPDDVPMAVKK--------------------------ERLAIL 364
Query: 82 KNRFNRRFEPMWTCIVGTNFGAYVSYESRRFIYFYLGQT 120
+NR N + + +VGT V+ S+++ G+T
Sbjct: 365 QNRINAKAAEISQSMVGTQQRILVTGPSKKYPDQLSGRT 403
>sp|B6J853|MIAB_COXB1 (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Coxiella burnetii (strain CbuK_Q154) GN=miaB PE=3
SV=1
Length = 439
Score = 32.3 bits (72), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 39/99 (39%), Gaps = 26/99 (26%)
Query: 22 HSFVYFYFSQKDTPQGTLMTDLPVAIKKVDMTKKMQTYVIRAAKVAFEKCTSQEEIAAYL 81
HSF + Y + TP L D+P+A+KK E A L
Sbjct: 331 HSFSFIYSPRPGTPAAQLPDDVPMAVKK--------------------------ERLAIL 364
Query: 82 KNRFNRRFEPMWTCIVGTNFGAYVSYESRRFIYFYLGQT 120
+NR N + + +VGT V+ S+++ G+T
Sbjct: 365 QNRINAKAAEISQSMVGTQQRILVTGPSKKYPDQLSGRT 403
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,995,939
Number of Sequences: 539616
Number of extensions: 2844952
Number of successful extensions: 44845
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 304
Number of HSP's successfully gapped in prelim test: 85
Number of HSP's that attempted gapping in prelim test: 37457
Number of HSP's gapped (non-prelim): 5160
length of query: 185
length of database: 191,569,459
effective HSP length: 110
effective length of query: 75
effective length of database: 132,211,699
effective search space: 9915877425
effective search space used: 9915877425
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)