BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13744
(296 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|350414148|ref|XP_003490220.1| PREDICTED: transcription elongation factor SPT5-like [Bombus
impatiens]
Length = 1133
Score = 204 bits (518), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 164/411 (39%), Positives = 203/411 (49%), Gaps = 127/411 (30%)
Query: 2 TGGFMSPRISSPMHPSGGRGGRGGGRGGHHGGNVRR--DRELIGKTIKITGGPYK--VG- 56
GFMSPRI+SPMHPSGG GRGGG G G DRELIG TIKITGGPYK VG
Sbjct: 728 VAGFMSPRIASPMHPSGGGFGRGGGGGRGRGRGGGARRDRELIGTTIKITGGPYKGNVGI 787
Query: 57 ------------------------------------------SRTP--GGGATPLH--DG 70
+RTP GGG TP++ DG
Sbjct: 788 VKDATETTARVELHSTCQTISVDRSHIANVAVLTKDGGFSSYNRTPAYGGGQTPMYARDG 847
Query: 71 SRTP----------------------------------GPWDPS--STPARSIHNDAYPM 94
S+TP G WDP+ +TPAR+ D Y M
Sbjct: 848 SKTPMHGSQTPMYENGSRTPHYGSMTPSHDGSRTPGQSGAWDPAVTNTPARTNDFDGYSM 907
Query: 95 DDSFNNSY-----------PHTPGTMYGSSSEHTSYSP-------LQASPSPSGYQSHSG 136
++ + Y P TPGTMYGS +SY P ASPSP+GY
Sbjct: 908 EEGGSPGYAPGYPSTGPFTPQTPGTMYGSEQSFSSYQPSPSPAGSASASPSPTGY----- 962
Query: 137 VSSGSSSYLGATPSPSSEAAPYGTPSPLSYSSRQ-------ASPFTPGTGLDQ------Y 183
V++ S S G T SP + TPSP+ YS +P TPG GLD
Sbjct: 963 VATPSPSGTGYTTSPH---GAFATPSPMGYSPMTPGVAGSPYNPQTPGAGLDTNVGSGII 1019
Query: 184 PTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGVCSVYLAEEERTLSIEAHELEPVM 243
EWHTTDIEVRI ++ +DP GQ GVIR + G+CS++L E+R +++ ELEPV+
Sbjct: 1020 GGAEWHTTDIEVRIRDSHQDPALAGQQGVIRGISGGMCSIFLPVEDRVVNLICEELEPVV 1079
Query: 244 PQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEEDDVKMIDVKFLCKYK 294
P D+VKVI+GE +E G LLS+DN EGVVKL +D+VKM+ ++FLCK K
Sbjct: 1080 PSRGDRVKVIIGEDREAVGTLLSIDNQEGVVKLN-KDEVKMLHLRFLCKMK 1129
>gi|380016442|ref|XP_003692194.1| PREDICTED: transcription elongation factor SPT5-like isoform 3 [Apis
florea]
Length = 1014
Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 167/408 (40%), Positives = 206/408 (50%), Gaps = 129/408 (31%)
Query: 4 GFMSPRISSPMHPSGGRGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK--VG----- 56
GFMSPRI+SPMHPSGG GGRG GG RRDRELIG TIKITGGPYK VG
Sbjct: 615 GFMSPRIASPMHPSGGGGGRGR----GRGGGARRDRELIGTTIKITGGPYKGNVGIVKDA 670
Query: 57 --------------------------------------SRTP--GGGATPLH--DGSRTP 74
+RTP GGG TP++ DGS+TP
Sbjct: 671 IDTTARVELHSTCQTISVDRSHIANVAVLTKDGGFSSYNRTPAYGGGQTPMYARDGSKTP 730
Query: 75 ----------------------------------GPWDPS--STPARSIHNDAYPMDDSF 98
G WDP+ +TPAR+ D Y M++
Sbjct: 731 MHGSQTPMYENGSRTPHYGSMTPSHDGSRTPGQSGAWDPAVTNTPARTNDFDGYSMEEGG 790
Query: 99 NNSY------------PHTPGTMYGSSSEHTSYSPLQASPSPSGYQSHSGVSSGSSSYLG 146
+ Y P TPGTMYGS +SY P SPSP+G S +S S +
Sbjct: 791 SPGYAPGYPPTGGPFTPQTPGTMYGSEQSFSSYQP---SPSPAG----SATASPSPAGYV 843
Query: 147 ATPSPS------SEAAPYGTPSPLSYSSRQ-------ASPFTPGTGLDQ------YPTPE 187
ATPSPS S + TPSP+ YS +P TPG GLD E
Sbjct: 844 ATPSPSGTGYTTSPHGAFATPSPMGYSPMTPGVAGSPYNPQTPGAGLDTGVGAGVIGGTE 903
Query: 188 WHTTDIEVRINENARDPEFRGQIGVIRHLG-SGVCSVYLAEEERTLSIEAHELEPVMPQP 246
WHTTDIEVRI ++ +DP GQ GVIR + SG+C+V+L E+R +++ ELEPV+P
Sbjct: 904 WHTTDIEVRIRDSHQDPALAGQQGVIRGISVSGMCAVFLPVEDRVVNLVCEELEPVVPSR 963
Query: 247 NDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEEDDVKMIDVKFLCKYK 294
D+VKVI+GE +E G LLS+DN EGVVKL +D+VKM+ ++FLCK K
Sbjct: 964 GDRVKVIIGEDREAVGTLLSIDNQEGVVKLN-KDEVKMLHLRFLCKMK 1010
>gi|380016440|ref|XP_003692193.1| PREDICTED: transcription elongation factor SPT5-like isoform 2 [Apis
florea]
Length = 1077
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 164/405 (40%), Positives = 203/405 (50%), Gaps = 122/405 (30%)
Query: 4 GFMSPRISSPMHPSGGRGGRGGGRGGHHGGNVRRDR-ELIGKTIKITGGPYK--VG---- 56
GFMSPRI+SPMHPSGG GRGGG G G R ELIG TIKITGGPYK VG
Sbjct: 677 GFMSPRIASPMHPSGGGFGRGGGGRGRGRGGGARRDRELIGTTIKITGGPYKGNVGIVKD 736
Query: 57 ---------------------------------------SRTP--GGGATPLH--DGSRT 73
+RTP GGG TP++ DGS+T
Sbjct: 737 AIDTTARVELHSTCQTISVDRSHIANVAVLTKDGGFSSYNRTPAYGGGQTPMYARDGSKT 796
Query: 74 P----------------------------------GPWDPS--STPARSIHNDAYPMDDS 97
P G WDP+ +TPAR+ D Y M++
Sbjct: 797 PMHGSQTPMYENGSRTPHYGSMTPSHDGSRTPGQSGAWDPAVTNTPARTNDFDGYSMEEG 856
Query: 98 FNNSY------------PHTPGTMYGSSSEHTSYSPLQASPSPSGYQSHSGVSSGSSSYL 145
+ Y P TPGTMYGS +SY P SPSP+G S +S S +
Sbjct: 857 GSPGYAPGYPPTGGPFTPQTPGTMYGSEQSFSSYQP---SPSPAG----SATASPSPAGY 909
Query: 146 GATPSPS------SEAAPYGTPSPLSYSSRQ----ASPFTPGTGLDQ------YPTPEWH 189
ATPSPS S + TPSP+ YS +P TPG GLD EWH
Sbjct: 910 VATPSPSGTGYTTSPHGAFATPSPMGYSPMTPGSPYNPQTPGAGLDTGVGAGVIGGTEWH 969
Query: 190 TTDIEVRINENARDPEFRGQIGVIRHLGSGVCSVYLAEEERTLSIEAHELEPVMPQPNDK 249
TTDIEVRI ++ +DP GQ GVIR + G+C+V+L E+R +++ ELEPV+P D+
Sbjct: 970 TTDIEVRIRDSHQDPALAGQQGVIRGITGGMCAVFLPVEDRVVNLVCEELEPVVPSRGDR 1029
Query: 250 VKVIVGEHKECTGVLLSVDNGEGVVKLTEEDDVKMIDVKFLCKYK 294
VKVI+GE +E G LLS+DN EGVVKL +D+VKM+ ++FLCK K
Sbjct: 1030 VKVIIGEDREAVGTLLSIDNQEGVVKLN-KDEVKMLHLRFLCKMK 1073
>gi|328775915|ref|XP_003249083.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor SPT5
[Apis mellifera]
Length = 1134
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 128/279 (45%), Positives = 163/279 (58%), Gaps = 45/279 (16%)
Query: 53 YKVGSRTPG-GGATPLHDGSRTPG---PWDPS--STPARSIHNDAYPMDDSFNNSY---- 102
Y+ GSRTP G TP HDGSRTPG WDP+ +TPAR+ D Y M++ + Y
Sbjct: 860 YENGSRTPHYGSMTPSHDGSRTPGQSGAWDPAVTNTPARTNDFDGYSMEEGGSPGYAPGY 919
Query: 103 --------PHTPGTMYGSSSEHTSYSPLQASPSPSGYQSHSGVSSGSSSYLGATPSPS-- 152
P TPGTMYGS +SY P SPSP+G S +S S + ATPSPS
Sbjct: 920 PPTGGPFTPQTPGTMYGSEQSFSSYQP---SPSPAG----SATASPSPAGYVATPSPSGT 972
Query: 153 ----SEAAPYGTPSPLSYSSRQ-------ASPFTPGTGLDQ------YPTPEWHTTDIEV 195
S + TPSP+ YS +P TPG GLD EWHTTDIEV
Sbjct: 973 GYTTSPHGAFATPSPMGYSPMTPGVAGSPYNPQTPGAGLDTGVGAGVIGGTEWHTTDIEV 1032
Query: 196 RINENARDPEFRGQIGVIRHLGSGVCSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVG 255
RI ++ +DP GQ GVIR + G+C+V+L E+R +++ ELEPV+P D+VKVI+G
Sbjct: 1033 RIRDSHQDPALAGQQGVIRGISGGMCAVFLPVEDRVVNLVCEELEPVVPSRGDRVKVIIG 1092
Query: 256 EHKECTGVLLSVDNGEGVVKLTEEDDVKMIDVKFLCKYK 294
E +E G LLS+DN EGVVKL +D+VKM+ ++FLCK K
Sbjct: 1093 EDREAVGTLLSIDNQEGVVKLN-KDEVKMLHLRFLCKMK 1130
>gi|383859710|ref|XP_003705335.1| PREDICTED: transcription elongation factor SPT5-like [Megachile
rotundata]
Length = 1135
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 128/279 (45%), Positives = 163/279 (58%), Gaps = 45/279 (16%)
Query: 53 YKVGSRTPG-GGATPLHDGSRTPG---PWDPS--STPARSIHNDAYPMDDSFNNSY---- 102
Y+ GSRTP G TP HDGSRTPG WDP+ +TPAR+ D Y M++ + Y
Sbjct: 861 YENGSRTPHYGSMTPSHDGSRTPGQSGAWDPAVTNTPARTNDFDGYSMEEGGSPGYAPGY 920
Query: 103 --------PHTPGTMYGSSSEHTSYSPLQASPSPSGYQSHSGVSSGSSSYLGATPSPS-- 152
P TPGTMYGS +SY P SPSP+G S +S S + ATPSPS
Sbjct: 921 PPTGGPFTPQTPGTMYGSEQSFSSYQP---SPSPAG----SATASPSPAGYVATPSPSGT 973
Query: 153 ----SEAAPYGTPSPLSYSSRQ-------ASPFTPGTGLDQ------YPTPEWHTTDIEV 195
S + TPSP+ YS +P TPG GLD EWHTTDIEV
Sbjct: 974 GYTTSPHGAFATPSPMGYSPMTPGVAGSPYNPQTPGAGLDTGVGAGIVGGTEWHTTDIEV 1033
Query: 196 RINENARDPEFRGQIGVIRHLGSGVCSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVG 255
RI ++ +DP GQ GVIR + G+C+V+L E+R +++ ELEPV+P D+VKVI+G
Sbjct: 1034 RIRDSHQDPALAGQQGVIRGISGGMCAVFLPVEDRVVNLVCEELEPVVPSRGDRVKVIIG 1093
Query: 256 EHKECTGVLLSVDNGEGVVKLTEEDDVKMIDVKFLCKYK 294
E +E G LLS+DN EGVVKL +D+VKM+ ++FLCK K
Sbjct: 1094 EDREAVGTLLSIDNQEGVVKLN-KDEVKMLHLRFLCKMK 1131
>gi|340717676|ref|XP_003397305.1| PREDICTED: transcription elongation factor SPT5-like isoform 2
[Bombus terrestris]
Length = 1075
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 159/407 (39%), Positives = 203/407 (49%), Gaps = 122/407 (29%)
Query: 2 TGGFMSPRISSPMHPSGGRGGRGGGRGGHHGGNVRR--DRELIGKTIKITGGPYK--VG- 56
GFMSPRI+SPMHPSGG GRGGG G G DRELIG TIKITGGPYK VG
Sbjct: 673 VAGFMSPRIASPMHPSGGGFGRGGGGGRGRGRGGGARRDRELIGTTIKITGGPYKGNVGI 732
Query: 57 ------------------------------------------SRTP--GGGATPLH--DG 70
+RTP GGG TP++ DG
Sbjct: 733 VKDATETTARVELHSTCQTISVDRSHIANVAVLTKDGGFSSYNRTPAYGGGQTPMYARDG 792
Query: 71 SRTP----------------------------------GPWDPS--STPARSIHNDAYPM 94
S+TP G WDP+ +TPAR+ D Y M
Sbjct: 793 SKTPMHGSQTPMYENGSRTPHYGSMTPSHDGSRTPGQSGAWDPAVTNTPARTNDFDGYSM 852
Query: 95 DDSFNNSY-----------PHTPGTMYGSSSEHTSYSPLQASPSPSGYQSHSGVSSGSSS 143
++ + Y P TPGTMYGS +SY P SPSP+G S +S S +
Sbjct: 853 EEGGSPGYAPGYPSTGPFTPQTPGTMYGSEQSFSSYQP---SPSPAG----SATASPSPT 905
Query: 144 YLGATPSP------SSEAAPYGTPSPLSYSSRQ----ASPFTPGTGLDQ------YPTPE 187
ATPSP +S + TPSP+ YS +P TPG LD +
Sbjct: 906 GYVATPSPTGTGYTTSPHGAFATPSPMGYSPMTPGSPYNPQTPGANLDTNVGSGIIGGAD 965
Query: 188 WHTTDIEVRINENARDPEFRGQIGVIRHLGSGVCSVYLAEEERTLSIEAHELEPVMPQPN 247
WHTTDIEVRI ++ +DP GQ GV+R + G+C+++L E+R +++ +LEPV+P
Sbjct: 966 WHTTDIEVRIRDSHQDPALAGQQGVVRGISGGMCAIFLPVEDRVVNLICEDLEPVVPSRG 1025
Query: 248 DKVKVIVGEHKECTGVLLSVDNGEGVVKLTEEDDVKMIDVKFLCKYK 294
D+VKVI+GE +E G LLS+DN EGVVKL +D+VKM+ ++FLCK K
Sbjct: 1026 DRVKVIIGEDREAVGTLLSIDNQEGVVKLN-KDEVKMLHLRFLCKMK 1071
>gi|340717674|ref|XP_003397304.1| PREDICTED: transcription elongation factor SPT5-like isoform 1
[Bombus terrestris]
Length = 1133
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 159/410 (38%), Positives = 203/410 (49%), Gaps = 125/410 (30%)
Query: 2 TGGFMSPRISSPMHPSGGRGGRGGGRGGHHGGNVRR--DRELIGKTIKITGGPYK--VG- 56
GFMSPRI+SPMHPSGG GRGGG G G DRELIG TIKITGGPYK VG
Sbjct: 728 VAGFMSPRIASPMHPSGGGFGRGGGGGRGRGRGGGARRDRELIGTTIKITGGPYKGNVGI 787
Query: 57 ------------------------------------------SRTP--GGGATPLH--DG 70
+RTP GGG TP++ DG
Sbjct: 788 VKDATETTARVELHSTCQTISVDRSHIANVAVLTKDGGFSSYNRTPAYGGGQTPMYARDG 847
Query: 71 SRTP----------------------------------GPWDPS--STPARSIHNDAYPM 94
S+TP G WDP+ +TPAR+ D Y M
Sbjct: 848 SKTPMHGSQTPMYENGSRTPHYGSMTPSHDGSRTPGQSGAWDPAVTNTPARTNDFDGYSM 907
Query: 95 DDSFNNSY-----------PHTPGTMYGSSSEHTSYSPLQASPSPSGYQSHSGVSSGSSS 143
++ + Y P TPGTMYGS +SY P SPSP+G S +S S +
Sbjct: 908 EEGGSPGYAPGYPSTGPFTPQTPGTMYGSEQSFSSYQP---SPSPAG----SATASPSPT 960
Query: 144 YLGATPSP------SSEAAPYGTPSPLSYSSRQ-------ASPFTPGTGLDQ------YP 184
ATPSP +S + TPSP+ YS +P TPG LD
Sbjct: 961 GYVATPSPTGTGYTTSPHGAFATPSPMGYSPMTPGVAGSPYNPQTPGANLDTNVGSGIIG 1020
Query: 185 TPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGVCSVYLAEEERTLSIEAHELEPVMP 244
+WHTTDIEVRI ++ +DP GQ GV+R + G+C+++L E+R +++ +LEPV+P
Sbjct: 1021 GADWHTTDIEVRIRDSHQDPALAGQQGVVRGISGGMCAIFLPVEDRVVNLICEDLEPVVP 1080
Query: 245 QPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEEDDVKMIDVKFLCKYK 294
D+VKVI+GE +E G LLS+DN EGVVKL +D+VKM+ ++FLCK K
Sbjct: 1081 SRGDRVKVIIGEDREAVGTLLSIDNQEGVVKLN-KDEVKMLHLRFLCKMK 1129
>gi|380016438|ref|XP_003692192.1| PREDICTED: transcription elongation factor SPT5-like isoform 1 [Apis
florea]
Length = 1135
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 165/409 (40%), Positives = 204/409 (49%), Gaps = 126/409 (30%)
Query: 4 GFMSPRISSPMHPSGGRGGRGGGRGGHHGGNVRRDR-ELIGKTIKITGGPYK--VG---- 56
GFMSPRI+SPMHPSGG GRGGG G G R ELIG TIKITGGPYK VG
Sbjct: 731 GFMSPRIASPMHPSGGGFGRGGGGRGRGRGGGARRDRELIGTTIKITGGPYKGNVGIVKD 790
Query: 57 ---------------------------------------SRTP--GGGATPLH--DGSRT 73
+RTP GGG TP++ DGS+T
Sbjct: 791 AIDTTARVELHSTCQTISVDRSHIANVAVLTKDGGFSSYNRTPAYGGGQTPMYARDGSKT 850
Query: 74 P----------------------------------GPWDPS--STPARSIHNDAYPMDDS 97
P G WDP+ +TPAR+ D Y M++
Sbjct: 851 PMHGSQTPMYENGSRTPHYGSMTPSHDGSRTPGQSGAWDPAVTNTPARTNDFDGYSMEEG 910
Query: 98 FNNSY------------PHTPGTMYGSSSEHTSYSPLQASPSPSGYQSHSGVSSGSSSYL 145
+ Y P TPGTMYGS +SY P SPSP+G S +S S +
Sbjct: 911 GSPGYAPGYPPTGGPFTPQTPGTMYGSEQSFSSYQP---SPSPAG----SATASPSPAGY 963
Query: 146 GATPSPS------SEAAPYGTPSPLSYSSRQ-------ASPFTPGTGLDQ------YPTP 186
ATPSPS S + TPSP+ YS +P TPG GLD
Sbjct: 964 VATPSPSGTGYTTSPHGAFATPSPMGYSPMTPGVAGSPYNPQTPGAGLDTGVGAGVIGGT 1023
Query: 187 EWHTTDIEVRINENARDPEFRGQIGVIRHLG-SGVCSVYLAEEERTLSIEAHELEPVMPQ 245
EWHTTDIEVRI ++ +DP GQ GVIR + SG+C+V+L E+R +++ ELEPV+P
Sbjct: 1024 EWHTTDIEVRIRDSHQDPALAGQQGVIRGISVSGMCAVFLPVEDRVVNLVCEELEPVVPS 1083
Query: 246 PNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEEDDVKMIDVKFLCKYK 294
D+VKVI+GE +E G LLS+DN EGVVKL +D+VKM+ ++FLCK K
Sbjct: 1084 RGDRVKVIIGEDREAVGTLLSIDNQEGVVKLN-KDEVKMLHLRFLCKMK 1131
>gi|307213971|gb|EFN89194.1| Transcription elongation factor SPT5 [Harpegnathos saltator]
Length = 1053
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 161/410 (39%), Positives = 199/410 (48%), Gaps = 125/410 (30%)
Query: 2 TGGFMSPRISSPMHPSGGRGGRGGGRGGHHGGNVRR---DRELIGKTIKITGGPYK--VG 56
GFMSPRI+SPMHPSGG GRGGG G G DRELIG TIKITGGPYK VG
Sbjct: 648 VAGFMSPRIASPMHPSGGGFGRGGGGAGRGRGRGGGARRDRELIGTTIKITGGPYKGNVG 707
Query: 57 -------------------------------------------SRTP---GGGATPLH-- 68
+RTP GG TP++
Sbjct: 708 IVKDATETTARVELHSTCQTISVDRSHIANVGVPSKDGGFSSYNRTPAYTAGGQTPMYAR 767
Query: 69 DGSRTP----------------------------------GPWDP--SSTPARSIHNDAY 92
DGS+TP G WDP ++TPAR+ D Y
Sbjct: 768 DGSKTPMHGSQTPMYENGSRTPHYGSMTPSHDGSRTPGQSGAWDPTVTNTPARTNDFDGY 827
Query: 93 PMDDSFNNSY------------PHTPGTMYGSSSEHTSYSPLQASPSPSGYQSHSGVSSG 140
M++ + Y P TPGTMYGS +SY P SPSP+G S +S
Sbjct: 828 SMEEGGSPGYAPGYPPTGGPFTPQTPGTMYGSEQSFSSYQP---SPSPAG----SATASP 880
Query: 141 SSSYLGATPSPS------SEAAPYGTPSPLSYSSRQ----ASPFTPGTGLD------QYP 184
S + ATPSPS S + TPSP+ YS +P TPG GLD
Sbjct: 881 SPTGYVATPSPSGTGYTTSPHGAFATPSPMGYSPMTPGSPYNPQTPGAGLDTGVGSSTIG 940
Query: 185 TPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGVCSVYLAEEERTLSIEAHELEPVMP 244
EWHTTDIEVRI ++ DP GQ VIR + G+C+VYL E+R +++ +LEPV+P
Sbjct: 941 GSEWHTTDIEVRIRDSHDDPALAGQQAVIRGISGGMCTVYLPTEDRVVNLGCEQLEPVVP 1000
Query: 245 QPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEEDDVKMIDVKFLCKYK 294
D+VKVI+GE +E G LLS+DN EGVVKL E ++K + ++FLCK K
Sbjct: 1001 SRGDRVKVILGEDREAVGTLLSIDNQEGVVKLNTE-EIKFLQLRFLCKMK 1049
>gi|332029065|gb|EGI69079.1| Transcription elongation factor SPT5 [Acromyrmex echinatior]
Length = 1142
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 162/414 (39%), Positives = 200/414 (48%), Gaps = 129/414 (31%)
Query: 2 TGGFMSPRISSPMHPSGGRGGRGGGRGGHHGGNVRR----DRELIGKTIKITGGPYK--V 55
GFMSPRI+SPMHPSGG GRGGG G G DRELIG TIKITGGPYK V
Sbjct: 732 VAGFMSPRIASPMHPSGGGFGRGGGGGRGRGRGGGGGARRDRELIGTTIKITGGPYKGNV 791
Query: 56 G-------------------------------------------SRTPGGGA-------- 64
G +RTP GA
Sbjct: 792 GIVKDATETTARVELHSTCQTISVDRSHIANVGVPSKDGGFSSYNRTPAYGAGGQTPMYA 851
Query: 65 -----TPLH--------DGSRTP------------------GPWDP--SSTPARSIHNDA 91
TP+H +GSRTP G WDP ++TPAR+ D
Sbjct: 852 RDGSKTPMHGSQTPMYENGSRTPHYGSMTPSHDGSRTPGQSGAWDPTVTNTPARTNDFDG 911
Query: 92 YPMDDSFNNSY------------PHTPGTMYGSSSEHTSYSPLQASPSPSGYQSHSGVSS 139
Y M++ + Y P TPGTMYGS +SY P SPSP+G S +S
Sbjct: 912 YSMEEGGSPGYGPGYPPTGGPFTPQTPGTMYGSEQSFSSYQP---SPSPAG----SATAS 964
Query: 140 GSSSYLGATPSPS------SEAAPYGTPSPLSYSSRQ-------ASPFTPGTGLDQ---- 182
S + ATPSPS S + TPSPL YS +P TPG+G+D
Sbjct: 965 PSPAGYVATPSPSGTGYTTSPHGAFATPSPLGYSPMTPGIPGSPYNPQTPGSGIDAGVGS 1024
Query: 183 --YPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGVCSVYLAEEERTLSIEAHELE 240
EWHTTDIEVRI ++ DP GQ VIR + G+C+VYL E+R +++ +LE
Sbjct: 1025 GIIGNSEWHTTDIEVRIRDSHDDPALAGQQAVIRGISGGMCTVYLPTEDRVVNLVCEQLE 1084
Query: 241 PVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEEDDVKMIDVKFLCKYK 294
PV+P D+VKVI+GE +E G LLS+DN EGVVKL D++K + ++FLCK K
Sbjct: 1085 PVVPSRGDRVKVILGEDREAVGTLLSIDNQEGVVKLN-TDEIKFLQLRFLCKMK 1137
>gi|307184945|gb|EFN71210.1| Transcription elongation factor SPT5 [Camponotus floridanus]
Length = 1096
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 125/278 (44%), Positives = 161/278 (57%), Gaps = 44/278 (15%)
Query: 53 YKVGSRTPG-GGATPLHDGSRTPG---PWDPS--STPARSIHNDAYPMDDSFNNSY---- 102
Y+ GSRTP G TP HDGSRTPG WDP+ +TPAR+ D Y M++ + Y
Sbjct: 823 YENGSRTPHYGSMTPSHDGSRTPGQSGAWDPAVTNTPARTNDFDGYSMEEGGSPGYAPGY 882
Query: 103 --------PHTPGTMYGSSSEHTSYSPLQASPSPSGYQSHSGVSSGSSSYLGATPSPS-- 152
P TPGTMYGS +SY P SPSP+G S +S S + ATPSPS
Sbjct: 883 PPTGGPFTPQTPGTMYGSEQSFSSYQP---SPSPAG----SATASPSPAGYVATPSPSGT 935
Query: 153 ----SEAAPYGTPSPLSYSSRQ-------ASPFTPGTGLD-----QYPTPEWHTTDIEVR 196
S + TPSP+SYS +P TPG+GLD +WHTTDIEVR
Sbjct: 936 GYTTSPHGAFATPSPMSYSPMTPGVAGSPYNPQTPGSGLDTGVGSSISGSDWHTTDIEVR 995
Query: 197 INENARDPEFRGQIGVIRHLGSGVCSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGE 256
I ++ DP GQ VIR + G+C+VYL E+R +++ +LEPV+P D+VKVI+GE
Sbjct: 996 IRDSHDDPALAGQQAVIRGISGGMCTVYLPTEDRVVNLGCEQLEPVVPSRGDRVKVILGE 1055
Query: 257 HKECTGVLLSVDNGEGVVKLTEEDDVKMIDVKFLCKYK 294
+E G LLS+DN EGVVKL E ++K + ++FLCK K
Sbjct: 1056 DREAVGTLLSIDNQEGVVKLNTE-EIKFLQLRFLCKMK 1092
>gi|242016949|ref|XP_002428957.1| transcription elongation factor SPT5, putative [Pediculus humanus
corporis]
gi|212513786|gb|EEB16219.1| transcription elongation factor SPT5, putative [Pediculus humanus
corporis]
Length = 1122
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 130/272 (47%), Positives = 163/272 (59%), Gaps = 36/272 (13%)
Query: 53 YKVGSRTPGGGATPLHDGSRTPG---PWDP--SSTPARSIHNDAYPMDDS---------- 97
Y+ GSRTP G TP HDGSRTPG WD ++TPARS + Y +D++
Sbjct: 856 YEPGSRTPYGSMTPSHDGSRTPGQSGAWDANVANTPARSNDFEVYSLDEASPSPGYNPST 915
Query: 98 --FNNSYPHTP----GTMYGSSSEHTSYSPLQASPSPSGYQSHSGVSSGSSSYLGATPSP 151
+ P+TP GTMYGS ++ Y SPSPSG+Q S S+ S S G TPSP
Sbjct: 916 PGYQAGGPYTPQTPGGTMYGSDHSYSPYQ---PSPSPSGFQGGSYSSTPSPSG-GYTPSP 971
Query: 152 SSEAAPYGTPS----PLSYSSRQA----SPFTPGTGLDQYPTPEWHTTDIEVRINENARD 203
S A Y TPS P++ S A +P TPG GLD P +W TTDIEVRI + D
Sbjct: 972 SG-APLYATPSLQYSPMTPGSGSAPSPYNPHTPGAGLDT-PVQDWQTTDIEVRIRDTHDD 1029
Query: 204 PEFRGQIGVIRHLGSGVCSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGV 263
P GQ G+IR + G CSVYL +EER ++I LEPV+PQ D+VKVI+GE +E G
Sbjct: 1030 PGLSGQTGIIRSITGGTCSVYLPDEERVVNIIGDHLEPVIPQRGDQVKVIMGEFREAVGQ 1089
Query: 264 LLSVDNGEGVVKLTEEDDVKMIDVKFLCKYKP 295
LLS+DN EGVVKL +D V+M+ ++FLCK KP
Sbjct: 1090 LLSIDNQEGVVKLN-QDQVQMLQLRFLCKMKP 1120
>gi|321454579|gb|EFX65744.1| hypothetical protein DAPPUDRAFT_303545 [Daphnia pulex]
Length = 1099
Score = 180 bits (457), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 123/284 (43%), Positives = 165/284 (58%), Gaps = 52/284 (18%)
Query: 52 PYKVGSRTPG-GGATPLHDGSRTPG---PWDPS--STPARSI-HNDAYPMDD-----SFN 99
P GSRTP GG TP HDGSRTPG WDP+ +TPARS + D DD ++N
Sbjct: 821 PLYDGSRTPHYGGMTPSHDGSRTPGQSGAWDPTVTNTPARSTDYGDLDNWDDQSPSPAYN 880
Query: 100 -----NSY----------PHTPGTMYGSSSEHTSYSPLQASPSPSGYQSHSGVSSGSSSY 144
++Y PHTPGT YGS +HT YSP Q SPSP+ YQ+ S S S
Sbjct: 881 PATPGSAYHVDTPQGPYTPHTPGTSYGS--DHT-YSPYQPSPSPAPYQA-----SPSPSG 932
Query: 145 LGATPSPSS---------EAAPYGTPSPLSYSSRQ-------ASPFTPGTGLDQYPTPEW 188
TPSPS+ A+ Y +PSP+SYS +P TPG G+D + +W
Sbjct: 933 YAPTPSPSTGLPFHPSPGMASSYTSPSPMSYSPMTPGVAPSPLNPQTPGAGMDSLSSQDW 992
Query: 189 HTTDIEVRINENARDPEFRGQIGVIRHLGSGVCSVYLAEEERTLSIEAHELEPVMPQPND 248
+TTDIEVR ++ D GQ G+IR + G+CS++L E+R +++ LEP++P D
Sbjct: 993 YTTDIEVRFKDSHSDAGLSGQSGIIRGISGGMCSLFLPAEDRVVTVAGELLEPIVPSRRD 1052
Query: 249 KVKVIVGEHKECTGVLLSVDNGEGVVKLTEEDDVKMIDVKFLCK 292
+VK+I+GE +E G LLS+D+ EGVVKL E DV+M +++LCK
Sbjct: 1053 RVKIILGEERESCGQLLSIDHQEGVVKL-ESGDVRMFQLRYLCK 1095
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 47/80 (58%), Gaps = 10/80 (12%)
Query: 4 GFMSPRISSPMHPS-----GGRGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK---- 54
G+MSPRISSPMHPS GG G GGG G GG + RDR+LIGKTIK+T GPYK
Sbjct: 689 GYMSPRISSPMHPSGGGGGGGGGRGGGGGGFGRGGRIGRDRDLIGKTIKVTQGPYKGHIG 748
Query: 55 -VGSRTPGGGATPLHDGSRT 73
V T LH +T
Sbjct: 749 IVKDATDSTARVELHSKCQT 768
>gi|270008998|gb|EFA05446.1| hypothetical protein TcasGA2_TC015626 [Tribolium castaneum]
Length = 1061
Score = 177 bits (448), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 111/252 (44%), Positives = 150/252 (59%), Gaps = 28/252 (11%)
Query: 56 GSRTP---GGGATPLHDGSRTPGP---WDPSST-----PARSIHNDAYPMDDSFNNSYPH 104
GSRTP GG TP+HDGSRTP WDP+ + P + Y M+ F P
Sbjct: 826 GSRTPLHYGGSMTPIHDGSRTPNASSEWDPTVSNTYPSPGYNPGTPGYQMNGPFT---PQ 882
Query: 105 TPGTMYGSSSEHTSYSPLQASPSPSGYQSHSGVSSGSSSYLGATPSPSSEAAPYGTPSPL 164
TPGT+Y S+ YSP QASP GYQS S ++ Y G +P+ ++ PY TPS
Sbjct: 883 TPGTIYDST-----YSPYQASP---GYQSAISTPSPATGY-GQSPASNN---PYNTPSSG 930
Query: 165 SYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGVCSVY 224
+ +P TPG GLD P +WHT DIEVRI ++ DP GQ G+IR + +CS++
Sbjct: 931 YSPNMPYNPQTPGAGLDVLPMTDWHTIDIEVRIRDSHDDPGLVGQTGIIRSISGAMCSIF 990
Query: 225 LAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEEDDVKM 284
L EE+R ++I + LEPV PQ D KVI+GE +E TG LLS+D EGVVK+ ++D+KM
Sbjct: 991 LPEEDRVVNIISDHLEPVRPQRGDAFKVIIGEEREATGELLSIDLHEGVVKM--KNDIKM 1048
Query: 285 IDVKFLCKYKPE 296
+ ++ LCK + +
Sbjct: 1049 LPLQNLCKMRKD 1060
>gi|242001250|ref|XP_002435268.1| transcription elongation factor SPT5, putative [Ixodes scapularis]
gi|215498598|gb|EEC08092.1| transcription elongation factor SPT5, putative [Ixodes scapularis]
Length = 961
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 120/271 (44%), Positives = 156/271 (57%), Gaps = 44/271 (16%)
Query: 53 YKVGSRTP--GGGATPLHDGSRTP--GPWDPSS--TPARSIHNDAYPMDDSFNNSYPHTP 106
Y+ GSRTP GGG TP+HDGSRTP G WDP++ TPAR +D Y ++++ + P TP
Sbjct: 700 YEAGSRTPHFGGGQTPVHDGSRTPVHGAWDPTTANTPARPELDD-YQLEEASPSYQPATP 758
Query: 107 GT----------------MYGSSSEHTSYSPLQASPSPSGYQSHSGVSSGSSSYLGATPS 150
G MYGS +SP QASPSP+ YQ S Y+ ATPS
Sbjct: 759 GYQAPETPQGPYTPQTPGMYGSDH---GFSPYQASPSPTAYQP----SPSPKGYV-ATPS 810
Query: 151 PSSEAAPYGTPSPLSYSSRQA------SPF---TPGTGLDQYPTPEWHTTDIEVRINENA 201
P + A GTPSP +Y SPF TPG G++ EW T D+EVRI +
Sbjct: 811 PVAFQA--GTPSPSTYGGYSPMTPGAPSPFNPQTPGAGMEALSV-EWQTMDLEVRIKDTH 867
Query: 202 RDPEFRGQIGVIRHLGSGVCSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECT 261
D GQ GVIR + G+CSV+L +E+R +SI + LEPV+P DKVKVI+GE +E T
Sbjct: 868 EDDGMIGQTGVIRGISGGMCSVFLLKEDRVVSILSEHLEPVVPVAKDKVKVILGEDREET 927
Query: 262 GVLLSVDNGEGVVKLTEEDDVKMIDVKFLCK 292
G LLS+D+ EGVVK+ + M +++LCK
Sbjct: 928 GELLSIDHPEGVVKMG-NGKITMQPMRYLCK 957
>gi|291389983|ref|XP_002711495.1| PREDICTED: suppressor of Ty 5 homolog isoform 1 [Oryctolagus
cuniculus]
Length = 1083
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 150/429 (34%), Positives = 199/429 (46%), Gaps = 145/429 (33%)
Query: 2 TGGF--MSPRISSPMHPSGG--RGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK--- 54
GGF MSPRISSPMHPS G RG G GG G RRD ELIG+T++I+ GPYK
Sbjct: 658 VGGFAPMSPRISSPMHPSAGGQRGDFGSPGGGMSRGRGRRDNELIGQTVRISQGPYKGYI 717
Query: 55 -------------------------------VGSRTPG---------------------- 61
VGS+ PG
Sbjct: 718 GVVKDATESTARVELHSTCQTISVDRQRLTTVGSQRPGGMTSTYGRTPMYGSQTPMYGSG 777
Query: 62 ------GGATPLHDGSRTP------------------GPWDPS--STPARSIHNDAYPMD 95
G TPL DGSRTP G WDP+ +TP+R+ Y D
Sbjct: 778 SRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFD 837
Query: 96 D--------------------------SFNNSY-PHTPGT--MYGSS--------SEHTS 118
D N Y P TPGT MY + S S
Sbjct: 838 DEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGS 897
Query: 119 YSPL-------QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGTPSP 163
Y P Q +PSP+GYQ +HS S + S A+PSPS S P G PSP
Sbjct: 898 YQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-GAPSP 956
Query: 164 LSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGVCSV 223
Y +P TPG+G++Q + +W TTDI+V++ + D + GQ GVIR + G+CSV
Sbjct: 957 GGY-----NPHTPGSGIEQN-SSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGMCSV 1010
Query: 224 YLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEEDDVK 283
YL + E+ +SI + LEP+ P N+KVKVI+GE +E TGVLLS+D +G+V++ ++ +K
Sbjct: 1011 YLKDSEKVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLK 1070
Query: 284 MIDVKFLCK 292
+++++FL K
Sbjct: 1071 ILNLRFLGK 1079
>gi|291389985|ref|XP_002711496.1| PREDICTED: suppressor of Ty 5 homolog isoform 2 [Oryctolagus
cuniculus]
Length = 1079
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 150/429 (34%), Positives = 199/429 (46%), Gaps = 145/429 (33%)
Query: 2 TGGF--MSPRISSPMHPSGG--RGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK--- 54
GGF MSPRISSPMHPS G RG G GG G RRD ELIG+T++I+ GPYK
Sbjct: 654 VGGFAPMSPRISSPMHPSAGGQRGDFGSPGGGMSRGRGRRDNELIGQTVRISQGPYKGYI 713
Query: 55 -------------------------------VGSRTPG---------------------- 61
VGS+ PG
Sbjct: 714 GVVKDATESTARVELHSTCQTISVDRQRLTTVGSQRPGGMTSTYGRTPMYGSQTPMYGSG 773
Query: 62 ------GGATPLHDGSRTP------------------GPWDPS--STPARSIHNDAYPMD 95
G TPL DGSRTP G WDP+ +TP+R+ Y D
Sbjct: 774 SRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFD 833
Query: 96 D--------------------------SFNNSY-PHTPGT--MYGSS--------SEHTS 118
D N Y P TPGT MY + S S
Sbjct: 834 DEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGS 893
Query: 119 YSPL-------QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGTPSP 163
Y P Q +PSP+GYQ +HS S + S A+PSPS S P G PSP
Sbjct: 894 YQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-GAPSP 952
Query: 164 LSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGVCSV 223
Y +P TPG+G++Q + +W TTDI+V++ + D + GQ GVIR + G+CSV
Sbjct: 953 GGY-----NPHTPGSGIEQN-SSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGMCSV 1006
Query: 224 YLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEEDDVK 283
YL + E+ +SI + LEP+ P N+KVKVI+GE +E TGVLLS+D +G+V++ ++ +K
Sbjct: 1007 YLKDSEKVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLK 1066
Query: 284 MIDVKFLCK 292
+++++FL K
Sbjct: 1067 ILNLRFLGK 1075
>gi|345494683|ref|XP_001604079.2| PREDICTED: transcription elongation factor SPT5-like isoform 1
[Nasonia vitripennis]
gi|345494685|ref|XP_003427341.1| PREDICTED: transcription elongation factor SPT5-like isoform 2
[Nasonia vitripennis]
Length = 1157
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 149/421 (35%), Positives = 197/421 (46%), Gaps = 137/421 (32%)
Query: 1 MTGGFMSPRISSPMHP-------------SGGRGGRGGGRGGHHGGNVRRDRELIGKTIK 47
M GFMSPRI+SPMHP G GG GGG G G RRDR+LIG TIK
Sbjct: 745 MISGFMSPRIASPMHPSGSPAGRGGGGPGGPGGGGGGGGGRGRGRGGARRDRDLIGTTIK 804
Query: 48 ITGGPYK--VG-------------------------------------------SRTPGG 62
IT GPYK VG SRTP
Sbjct: 805 ITSGPYKGNVGIVKDATETTARVELHSTCQTISVDRSHIANVGVPTKDGGFSSYSRTPAY 864
Query: 63 GA---TPLHDGSRTP-----------------------------------GPWDP--SST 82
GA TP++ GS+TP G WDP ++T
Sbjct: 865 GAGSQTPMYSGSKTPMHGSQTPMYETGSRTPHYGSMTPSHDAGSRTPGQSGAWDPTVTNT 924
Query: 83 PARSIHNDAYPMDDSFNNSY-----------PHTPGTMYGSSSEHTSYSPLQASPSPSGY 131
PAR+ D Y +++ + Y P TPGTMYGS S+ P Q SPSP
Sbjct: 925 PARTSDFDGYNIEEGGSPGYAPGYPSGGPFTPQTPGTMYGSEQ---SFGPYQPSPSPVA- 980
Query: 132 QSHSGVSSGSSSYLGATPSPS------SEAAPYGTPSPLSYSSRQ-------ASPFTPGT 178
S +S S + G+TPSP+ S + +PSP+ YS +P TPG+
Sbjct: 981 ---SATASPSPAAYGSTPSPAGTGYTTSPHGAFASPSPMGYSPMTPGGVGSPYNPQTPGS 1037
Query: 179 GLDQYPT-----PEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGVCSVYLAEEERTLS 233
+D + EWHTTD+EVR+ ++ D GQ G I + G+C+V+L E+R+++
Sbjct: 1038 TIDAGHSSGVFGQEWHTTDLEVRVRDSNLDAA--GQQGYITTITGGMCTVFLPREDRSVN 1095
Query: 234 IEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEEDDVKMIDVKFLCKY 293
I +LEPV+P ND+VKVI+GE +E G LLS+DN EGV K + +VKM+ ++FLCK
Sbjct: 1096 ILCDQLEPVVPSQNDRVKVIIGEDRESVGTLLSIDNQEGVFK-SNAGEVKMLQLRFLCKM 1154
Query: 294 K 294
+
Sbjct: 1155 R 1155
>gi|426242877|ref|XP_004015297.1| PREDICTED: transcription elongation factor SPT5 isoform 2 [Ovis
aries]
Length = 1076
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 151/425 (35%), Positives = 200/425 (47%), Gaps = 141/425 (33%)
Query: 2 TGGF--MSPRISSPMHPSGG-----RGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK 54
GGF MSPRISSPMHPS G G GGG GG G RRD ELIG+T++I+ GPYK
Sbjct: 655 VGGFAPMSPRISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYK 714
Query: 55 ----------------------------------VGSRTPGGGA---------------- 64
VGSR PGG A
Sbjct: 715 GYIGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMASTYGRTPMYGSQTPMY 774
Query: 65 ---------------------------TPLHDGSRTP---GPWDPS--STPARSIHNDAY 92
TPLHDGSRTP G WDP+ +TP+R+ Y
Sbjct: 775 GSGSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEY 834
Query: 93 PMDD--------------------------SFNNSY-PHTPGT--MYGSSSEHTSYSPL- 122
DD N Y P TPGT MY + +P
Sbjct: 835 AFDDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPAQ 894
Query: 123 -------QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGTPSPLSYS 167
Q +PSP+GYQ +HS S + S A+PSPS S P G PSP Y
Sbjct: 895 PQPSGNHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-GAPSPGGY- 952
Query: 168 SRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGVCSVYLAE 227
+P TPG+G++Q + +W TTDI+V++ + D + GQ GVIR + G+CSVYL +
Sbjct: 953 ----NPHTPGSGIEQN-SSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGMCSVYLKD 1007
Query: 228 EERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEEDDVKMIDV 287
E+ +SI + LEP+ P N+KVKVI+GE +E TGVLLS+D +G+V++ ++ +K++++
Sbjct: 1008 SEKVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNL 1067
Query: 288 KFLCK 292
+FL K
Sbjct: 1068 RFLGK 1072
>gi|426242875|ref|XP_004015296.1| PREDICTED: transcription elongation factor SPT5 isoform 1 [Ovis
aries]
Length = 1080
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 151/425 (35%), Positives = 200/425 (47%), Gaps = 141/425 (33%)
Query: 2 TGGF--MSPRISSPMHPSGG-----RGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK 54
GGF MSPRISSPMHPS G G GGG GG G RRD ELIG+T++I+ GPYK
Sbjct: 659 VGGFAPMSPRISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYK 718
Query: 55 ----------------------------------VGSRTPGGGA---------------- 64
VGSR PGG A
Sbjct: 719 GYIGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMASTYGRTPMYGSQTPMY 778
Query: 65 ---------------------------TPLHDGSRTP---GPWDPS--STPARSIHNDAY 92
TPLHDGSRTP G WDP+ +TP+R+ Y
Sbjct: 779 GSGSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEY 838
Query: 93 PMDD--------------------------SFNNSY-PHTPGT--MYGSSSEHTSYSPL- 122
DD N Y P TPGT MY + +P
Sbjct: 839 AFDDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPAQ 898
Query: 123 -------QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGTPSPLSYS 167
Q +PSP+GYQ +HS S + S A+PSPS S P G PSP Y
Sbjct: 899 PQPSGNHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-GAPSPGGY- 956
Query: 168 SRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGVCSVYLAE 227
+P TPG+G++Q + +W TTDI+V++ + D + GQ GVIR + G+CSVYL +
Sbjct: 957 ----NPHTPGSGIEQN-SSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGMCSVYLKD 1011
Query: 228 EERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEEDDVKMIDV 287
E+ +SI + LEP+ P N+KVKVI+GE +E TGVLLS+D +G+V++ ++ +K++++
Sbjct: 1012 SEKVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNL 1071
Query: 288 KFLCK 292
+FL K
Sbjct: 1072 RFLGK 1076
>gi|440910334|gb|ELR60142.1| Transcription elongation factor SPT5 [Bos grunniens mutus]
Length = 1083
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 154/432 (35%), Positives = 202/432 (46%), Gaps = 148/432 (34%)
Query: 2 TGGF--MSPRISSPMHPSGG-----RGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK 54
GGF MSPRISSPMHPS G G GGG GG G RRD ELIG+T++I+ GPYK
Sbjct: 655 VGGFAPMSPRISSPMHPSAGGQRGGFGSPGGGGGGMSRGRGRRDNELIGQTVRISQGPYK 714
Query: 55 ----------------------------------VGSRTPGGGA---------------- 64
VGSR PGG A
Sbjct: 715 GYIGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMASTYGRTPMYGSQTPMY 774
Query: 65 ---------------------------TPLHDGSRTP---GPWDPS--STPARSIHNDAY 92
TPLHDGSRTP G WDP+ +TP+R+ Y
Sbjct: 775 GSGSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEY 834
Query: 93 PMDD--------------------------SFNNSY-PHTPGT--MYGSS--------SE 115
DD N Y P TPGT MY + S
Sbjct: 835 AFDDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSP 894
Query: 116 HTSYSPL-------QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGT 160
SY P Q +PSP+GYQ +HS S + S A+PSPS S P G
Sbjct: 895 QGSYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-GA 953
Query: 161 PSPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGV 220
PSP Y +P TPG+G++Q + +W TTDI+V++ + D + GQ GVIR + G+
Sbjct: 954 PSPGGY-----NPHTPGSGIEQN-SSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGM 1007
Query: 221 CSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEED 280
CSVYL + E+ +SI + LEP+ P N+KVKVI+GE +E TGVLLS+D +G+V++ ++
Sbjct: 1008 CSVYLKDSEKVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDE 1067
Query: 281 DVKMIDVKFLCK 292
+K+++++FL K
Sbjct: 1068 QLKILNLRFLGK 1079
>gi|91084937|ref|XP_971098.1| PREDICTED: similar to Spt5 CG7626-PA [Tribolium castaneum]
Length = 1050
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 143/380 (37%), Positives = 186/380 (48%), Gaps = 117/380 (30%)
Query: 5 FMSPRISSPMHPSGGRGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK---------- 54
+MSPR SSPMHPS G GG GGG G G V RDR++IG TIKIT GPYK
Sbjct: 699 YMSPRRSSPMHPSSGGGGMGGG--GGGRGRVSRDRDIIGTTIKITKGPYKGNIGIVKDAT 756
Query: 55 ------------------------VGS-----------RTPG------------GGATPL 67
VG+ RTP G TP+
Sbjct: 757 QSTARIELHTSCQTISVDRSHIADVGTPSRDGSISSYGRTPAYTGNQTPLYRDTGNKTPM 816
Query: 68 HD-GSRTPGPWDPSSTPARSIH------NDAYPMDDSFNNSY------------------ 102
D GSRTP + S TP IH N + D + +N+Y
Sbjct: 817 CDSGSRTPLHYGGSMTP---IHDGSRTPNASSEWDPTVSNTYPSPGYNPGTPGYQMNGPF 873
Query: 103 -PHTPGTMYGSSSEHTSYSPLQAS----PSP-SGYQSHSGVSSGSSSYLGATPSPSSEAA 156
P TPGT+Y S +YSP QAS PSP +GY G +P+ ++
Sbjct: 874 TPQTPGTIYDS-----TYSPYQASAISTPSPATGY--------------GQSPASNN--- 911
Query: 157 PYGTPSPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHL 216
PY TPS + +P TPG GLD P +WHT DIEVRI ++ DP GQ G+IR +
Sbjct: 912 PYNTPSSGYSPNMPYNPQTPGAGLDVLPMTDWHTIDIEVRIRDSHDDPGLVGQTGIIRSI 971
Query: 217 GSGVCSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKL 276
+CS++L EE+R ++I + LEPV PQ D KVI+GE +E TG LLS+D EGVVK+
Sbjct: 972 SGAMCSIFLPEEDRVVNIISDHLEPVRPQRGDAFKVIIGEEREATGELLSIDLHEGVVKM 1031
Query: 277 TEEDDVKMIDVKFLCKYKPE 296
++D+KM+ ++ LCK + +
Sbjct: 1032 --KNDIKMLPLQNLCKMRKD 1049
>gi|328927069|ref|NP_001076908.2| transcription elongation factor SPT5 [Bos taurus]
gi|157279187|gb|AAI34447.1| SUPT5H protein [Bos taurus]
Length = 1083
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 153/432 (35%), Positives = 201/432 (46%), Gaps = 148/432 (34%)
Query: 2 TGGF--MSPRISSPMHPSGG-----RGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK 54
GGF MSPRISSPMHPS G G GGG GG G RRD ELIG+T++I+ GPYK
Sbjct: 655 VGGFAPMSPRISSPMHPSAGGQRGGFGSPGGGGGGMSRGRGRRDNELIGQTVRISQGPYK 714
Query: 55 ----------------------------------VGSRTPGGGA---------------- 64
VGSR PGG A
Sbjct: 715 GYIGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMASTYGRTPMYGSQTPMY 774
Query: 65 ---------------------------TPLHDGSRTP---GPWDPS--STPARSIHNDAY 92
TPLHDGSRTP G WDP+ +TP+R+ Y
Sbjct: 775 GSGSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEY 834
Query: 93 PMDD--------------------------SFNNSY-PHTPGT--MYGSS--------SE 115
DD N Y P TPGT MY + S
Sbjct: 835 AFDDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSP 894
Query: 116 HTSYSPL-------QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGT 160
SY P Q +PSP+GYQ +HS S + S A+PSP S P G
Sbjct: 895 QGSYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPGPVGYSPMTP-GA 953
Query: 161 PSPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGV 220
PSP Y +P TPG+G++Q + +W TTDI+V++ + D + GQ GVIR + G+
Sbjct: 954 PSPGGY-----NPHTPGSGIEQN-SSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGM 1007
Query: 221 CSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEED 280
CSVYL + E+ +SI + LEP+ P N+KVKVI+GE +E TGVLLS+D +G+V++ ++
Sbjct: 1008 CSVYLKDSEKVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDE 1067
Query: 281 DVKMIDVKFLCK 292
+K+++++FL K
Sbjct: 1068 QLKILNLRFLGK 1079
>gi|327287408|ref|XP_003228421.1| PREDICTED: transcription elongation factor SPT5-like [Anolis
carolinensis]
Length = 1081
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 149/426 (34%), Positives = 199/426 (46%), Gaps = 143/426 (33%)
Query: 3 GGF--MSPRISSPMHPSGGRGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK------ 54
GGF MSPRI+SPMHPS G G G GG G RRD +LIG+T++I+ GPYK
Sbjct: 659 GGFAPMSPRINSPMHPSAGGQPGGFGGGGMSRGRGRRDNDLIGQTVRISQGPYKGYIGVV 718
Query: 55 ----------------------------VGSRTPG------------------------- 61
VGSR PG
Sbjct: 719 KDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSAHSRTPMYGSQTPMYGSGSRT 778
Query: 62 ---GGATPLHDGSRTP------------------GPWDPS--STPARSIHNDAYPMDD-- 96
G TPLHDG+RTP G WDP+ +TP+R+ Y DD
Sbjct: 779 PMYGSQTPLHDGNRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEFDYGFDDEP 838
Query: 97 ------------------------SFNNSY-PHTPGT--MYGSS--------SEHTSYSP 121
N Y P TPGT MY + S SY P
Sbjct: 839 TPSPQGYGGTPNPQTPGYPDPSSPQVNPPYNPQTPGTPAMYNTDQFSPYAVPSPQGSYQP 898
Query: 122 L-------QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGTPSPLSY 166
Q +PSP GYQ +HS S + S A+PSPS S P G PSP +Y
Sbjct: 899 SPSPQSFHQVAPSPVGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-GAPSPGAY 957
Query: 167 SSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGVCSVYLA 226
+P TPG+G++Q + +W TTDI+V++ + D + GQ GVIR + G+CSVYL
Sbjct: 958 -----NPHTPGSGIEQ-SSSDWVTTDIQVKVRDTYLDSQVVGQTGVIRSVTGGICSVYLK 1011
Query: 227 EEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEEDDVKMID 286
+ E+ +SI + LEPV P N+KVKVI+GE +E TGVLLS+D +G+V++ ++ +K+++
Sbjct: 1012 DSEKVVSISSEHLEPVTPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILN 1071
Query: 287 VKFLCK 292
++FL K
Sbjct: 1072 LRFLGK 1077
>gi|301784031|ref|XP_002927427.1| PREDICTED: transcription elongation factor SPT5-like isoform 2
[Ailuropoda melanoleuca]
Length = 1082
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 153/431 (35%), Positives = 201/431 (46%), Gaps = 147/431 (34%)
Query: 2 TGGF--MSPRISSPMHPSGG----RGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK- 54
GGF MSPRISSPMHPS G G GG GG G RRD ELIG+T++I+ GPYK
Sbjct: 655 VGGFAPMSPRISSPMHPSAGGQRGGFGSPGGGGGMSRGRGRRDNELIGQTVRISQGPYKG 714
Query: 55 ---------------------------------VGSRTPGG-----GATP---------- 66
VGSR PGG G TP
Sbjct: 715 YIGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYG 774
Query: 67 ----------------------------LHDGSRTP---GPWDPS--STPARSIHNDAYP 93
LHDGSRTP G WDP+ +TP+R+ Y
Sbjct: 775 SGSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYA 834
Query: 94 MDD--------------------------SFNNSY-PHTPGT--MYGSS--------SEH 116
DD N Y P TPGT MY + S
Sbjct: 835 FDDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQ 894
Query: 117 TSYSPL-------QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGTP 161
SY P Q +PSP+GYQ +HS S + S A+PSPS S P G P
Sbjct: 895 GSYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-GAP 953
Query: 162 SPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGVC 221
SP Y +P TPG+G++Q + +W TTDI+V++ + D + GQ GVIR + G+C
Sbjct: 954 SPGGY-----NPHTPGSGIEQN-SSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGMC 1007
Query: 222 SVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEEDD 281
SVYL + E+ +SI + LEP+ P N+KVKVI+GE +E TGVLLS+D +G+V++ ++
Sbjct: 1008 SVYLKDSEKVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQ 1067
Query: 282 VKMIDVKFLCK 292
+K+++++FL K
Sbjct: 1068 LKILNLRFLGK 1078
>gi|62088094|dbj|BAD92494.1| suppressor of Ty 5 homolog variant [Homo sapiens]
Length = 1116
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 154/432 (35%), Positives = 202/432 (46%), Gaps = 148/432 (34%)
Query: 2 TGGF--MSPRISSPMHPSGG-----RGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK 54
GGF MSPRISSPMHPS G G GGG GG G RRD ELIG+T++I+ GPYK
Sbjct: 688 VGGFAPMSPRISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYK 747
Query: 55 ----------------------------------VGSRTPGG-----GATP--------- 66
VGSR PGG G TP
Sbjct: 748 GYIGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMY 807
Query: 67 -----------------------------LHDGSRTP---GPWDPS--STPARSIHNDAY 92
LHDGSRTP G WDP+ +TP+R+ Y
Sbjct: 808 GSGSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEY 867
Query: 93 PMDD--------------------------SFNNSY-PHTPGT--MYGSS--------SE 115
DD N Y P TPGT MY + S
Sbjct: 868 AFDDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSP 927
Query: 116 HTSYSPL-------QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGT 160
SY P Q +PSP+GYQ +HS S + S A+PSPS S P G
Sbjct: 928 QGSYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-GA 986
Query: 161 PSPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGV 220
PSP Y +P TPG+G++Q + +W TTDI+V++ + D + GQ GVIR + G+
Sbjct: 987 PSPGGY-----NPHTPGSGIEQN-SSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGM 1040
Query: 221 CSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEED 280
CSVYL + E+ +SI + LEP+ P N+KVKVI+GE +E TGVLLS+D +G+V++ ++
Sbjct: 1041 CSVYLKDSEKVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDE 1100
Query: 281 DVKMIDVKFLCK 292
+K+++++FL K
Sbjct: 1101 QLKILNLRFLGK 1112
>gi|426388682|ref|XP_004060762.1| PREDICTED: transcription elongation factor SPT5 isoform 2 [Gorilla
gorilla gorilla]
Length = 1115
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 154/432 (35%), Positives = 202/432 (46%), Gaps = 148/432 (34%)
Query: 2 TGGF--MSPRISSPMHPSGG-----RGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK 54
GGF MSPRISSPMHPS G G GGG GG G RRD ELIG+T++I+ GPYK
Sbjct: 687 VGGFAPMSPRISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYK 746
Query: 55 ----------------------------------VGSRTPGG-----GATP--------- 66
VGSR PGG G TP
Sbjct: 747 GYIGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMY 806
Query: 67 -----------------------------LHDGSRTP---GPWDPS--STPARSIHNDAY 92
LHDGSRTP G WDP+ +TP+R+ Y
Sbjct: 807 GSGSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEY 866
Query: 93 PMDD--------------------------SFNNSY-PHTPGT--MYGSS--------SE 115
DD N Y P TPGT MY + S
Sbjct: 867 AFDDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSP 926
Query: 116 HTSYSPL-------QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGT 160
SY P Q +PSP+GYQ +HS S + S A+PSPS S P G
Sbjct: 927 QGSYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-GA 985
Query: 161 PSPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGV 220
PSP Y +P TPG+G++Q + +W TTDI+V++ + D + GQ GVIR + G+
Sbjct: 986 PSPGGY-----NPHTPGSGIEQN-SSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGM 1039
Query: 221 CSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEED 280
CSVYL + E+ +SI + LEP+ P N+KVKVI+GE +E TGVLLS+D +G+V++ ++
Sbjct: 1040 CSVYLKDSEKVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDE 1099
Query: 281 DVKMIDVKFLCK 292
+K+++++FL K
Sbjct: 1100 QLKILNLRFLGK 1111
>gi|281344078|gb|EFB19662.1| hypothetical protein PANDA_017202 [Ailuropoda melanoleuca]
Length = 980
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 153/431 (35%), Positives = 201/431 (46%), Gaps = 147/431 (34%)
Query: 2 TGGF--MSPRISSPMHPSGG----RGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK- 54
GGF MSPRISSPMHPS G G GG GG G RRD ELIG+T++I+ GPYK
Sbjct: 553 VGGFAPMSPRISSPMHPSAGGQRGGFGSPGGGGGMSRGRGRRDNELIGQTVRISQGPYKG 612
Query: 55 ---------------------------------VGSRTPGG-----GATP---------- 66
VGSR PGG G TP
Sbjct: 613 YIGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYG 672
Query: 67 ----------------------------LHDGSRTP---GPWDPS--STPARSIHNDAYP 93
LHDGSRTP G WDP+ +TP+R+ Y
Sbjct: 673 SGSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYA 732
Query: 94 MDD--------------------------SFNNSY-PHTPGT--MYGSS--------SEH 116
DD N Y P TPGT MY + S
Sbjct: 733 FDDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQ 792
Query: 117 TSYSPL-------QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGTP 161
SY P Q +PSP+GYQ +HS S + S A+PSPS S P G P
Sbjct: 793 GSYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-GAP 851
Query: 162 SPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGVC 221
SP Y +P TPG+G++Q + +W TTDI+V++ + D + GQ GVIR + G+C
Sbjct: 852 SPGGY-----NPHTPGSGIEQ-NSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGMC 905
Query: 222 SVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEEDD 281
SVYL + E+ +SI + LEP+ P N+KVKVI+GE +E TGVLLS+D +G+V++ ++
Sbjct: 906 SVYLKDSEKVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQ 965
Query: 282 VKMIDVKFLCK 292
+K+++++FL K
Sbjct: 966 LKILNLRFLGK 976
>gi|195546902|ref|NP_001124297.1| transcription elongation factor SPT5 isoform b [Homo sapiens]
gi|208965586|dbj|BAG72807.1| suppressor of Ty 5 homolog [synthetic construct]
Length = 1083
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 154/432 (35%), Positives = 202/432 (46%), Gaps = 148/432 (34%)
Query: 2 TGGF--MSPRISSPMHPSGG-----RGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK 54
GGF MSPRISSPMHPS G G GGG GG G RRD ELIG+T++I+ GPYK
Sbjct: 655 VGGFAPMSPRISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYK 714
Query: 55 ----------------------------------VGSRTPGG-----GATP--------- 66
VGSR PGG G TP
Sbjct: 715 GYIGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMY 774
Query: 67 -----------------------------LHDGSRTP---GPWDPS--STPARSIHNDAY 92
LHDGSRTP G WDP+ +TP+R+ Y
Sbjct: 775 GSGSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEY 834
Query: 93 PMDD--------------------------SFNNSY-PHTPGT--MYGSS--------SE 115
DD N Y P TPGT MY + S
Sbjct: 835 AFDDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSP 894
Query: 116 HTSYSPL-------QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGT 160
SY P Q +PSP+GYQ +HS S + S A+PSPS S P G
Sbjct: 895 QGSYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-GA 953
Query: 161 PSPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGV 220
PSP Y +P TPG+G++Q + +W TTDI+V++ + D + GQ GVIR + G+
Sbjct: 954 PSPGGY-----NPHTPGSGIEQN-SSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGM 1007
Query: 221 CSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEED 280
CSVYL + E+ +SI + LEP+ P N+KVKVI+GE +E TGVLLS+D +G+V++ ++
Sbjct: 1008 CSVYLKDSEKVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDE 1067
Query: 281 DVKMIDVKFLCK 292
+K+++++FL K
Sbjct: 1068 QLKILNLRFLGK 1079
>gi|194381082|dbj|BAG64109.1| unnamed protein product [Homo sapiens]
Length = 1065
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 154/432 (35%), Positives = 202/432 (46%), Gaps = 148/432 (34%)
Query: 2 TGGF--MSPRISSPMHPSGG-----RGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK 54
GGF MSPRISSPMHPS G G GGG GG G RRD ELIG+T++I+ GPYK
Sbjct: 637 VGGFAPMSPRISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYK 696
Query: 55 ----------------------------------VGSRTPGG-----GATP--------- 66
VGSR PGG G TP
Sbjct: 697 GYIGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMY 756
Query: 67 -----------------------------LHDGSRTP---GPWDPS--STPARSIHNDAY 92
LHDGSRTP G WDP+ +TP+R+ Y
Sbjct: 757 GSGSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEY 816
Query: 93 PMDD--------------------------SFNNSY-PHTPGT--MYGSS--------SE 115
DD N Y P TPGT MY + S
Sbjct: 817 AFDDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSP 876
Query: 116 HTSYSPL-------QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGT 160
SY P Q +PSP+GYQ +HS S + S A+PSPS S P G
Sbjct: 877 QGSYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-GA 935
Query: 161 PSPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGV 220
PSP Y +P TPG+G++Q + +W TTDI+V++ + D + GQ GVIR + G+
Sbjct: 936 PSPGGY-----NPHTPGSGIEQN-SSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGM 989
Query: 221 CSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEED 280
CSVYL + E+ +SI + LEP+ P N+KVKVI+GE +E TGVLLS+D +G+V++ ++
Sbjct: 990 CSVYLKDSEKVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDE 1049
Query: 281 DVKMIDVKFLCK 292
+K+++++FL K
Sbjct: 1050 QLKILNLRFLGK 1061
>gi|20149524|ref|NP_003160.2| transcription elongation factor SPT5 isoform a [Homo sapiens]
gi|161169023|ref|NP_001104490.1| transcription elongation factor SPT5 isoform a [Homo sapiens]
gi|195546900|ref|NP_001124296.1| transcription elongation factor SPT5 isoform a [Homo sapiens]
gi|74735318|sp|O00267.1|SPT5H_HUMAN RecName: Full=Transcription elongation factor SPT5; Short=hSPT5;
AltName: Full=DRB sensitivity-inducing factor 160 kDa
subunit; Short=DSIF p160; AltName: Full=DRB
sensitivity-inducing factor large subunit; Short=DSIF
large subunit; AltName: Full=Tat-cotransactivator 1
protein; Short=Tat-CT1 protein
gi|2065177|emb|CAA73326.1| Supt5h protein [Homo sapiens]
gi|4104824|gb|AAD02179.1| transcription factor Tat-CT1 [Homo sapiens]
gi|18848308|gb|AAH24203.1| Suppressor of Ty 5 homolog (S. cerevisiae) [Homo sapiens]
gi|119577304|gb|EAW56900.1| suppressor of Ty 5 homolog (S. cerevisiae), isoform CRA_b [Homo
sapiens]
gi|124000571|gb|ABM87794.1| suppressor of Ty 5 homolog (S. cerevisiae) [synthetic construct]
Length = 1087
Score = 163 bits (413), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 154/432 (35%), Positives = 202/432 (46%), Gaps = 148/432 (34%)
Query: 2 TGGF--MSPRISSPMHPSGG-----RGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK 54
GGF MSPRISSPMHPS G G GGG GG G RRD ELIG+T++I+ GPYK
Sbjct: 659 VGGFAPMSPRISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYK 718
Query: 55 ----------------------------------VGSRTPGG-----GATP--------- 66
VGSR PGG G TP
Sbjct: 719 GYIGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMY 778
Query: 67 -----------------------------LHDGSRTP---GPWDPS--STPARSIHNDAY 92
LHDGSRTP G WDP+ +TP+R+ Y
Sbjct: 779 GSGSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEY 838
Query: 93 PMDD--------------------------SFNNSY-PHTPGT--MYGSS--------SE 115
DD N Y P TPGT MY + S
Sbjct: 839 AFDDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSP 898
Query: 116 HTSYSPL-------QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGT 160
SY P Q +PSP+GYQ +HS S + S A+PSPS S P G
Sbjct: 899 QGSYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-GA 957
Query: 161 PSPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGV 220
PSP Y +P TPG+G++Q + +W TTDI+V++ + D + GQ GVIR + G+
Sbjct: 958 PSPGGY-----NPHTPGSGIEQN-SSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGM 1011
Query: 221 CSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEED 280
CSVYL + E+ +SI + LEP+ P N+KVKVI+GE +E TGVLLS+D +G+V++ ++
Sbjct: 1012 CSVYLKDSEKVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDE 1071
Query: 281 DVKMIDVKFLCK 292
+K+++++FL K
Sbjct: 1072 QLKILNLRFLGK 1083
>gi|301784029|ref|XP_002927426.1| PREDICTED: transcription elongation factor SPT5-like isoform 1
[Ailuropoda melanoleuca]
Length = 1086
Score = 163 bits (413), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 153/431 (35%), Positives = 201/431 (46%), Gaps = 147/431 (34%)
Query: 2 TGGF--MSPRISSPMHPSGG----RGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK- 54
GGF MSPRISSPMHPS G G GG GG G RRD ELIG+T++I+ GPYK
Sbjct: 659 VGGFAPMSPRISSPMHPSAGGQRGGFGSPGGGGGMSRGRGRRDNELIGQTVRISQGPYKG 718
Query: 55 ---------------------------------VGSRTPGG-----GATP---------- 66
VGSR PGG G TP
Sbjct: 719 YIGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYG 778
Query: 67 ----------------------------LHDGSRTP---GPWDPS--STPARSIHNDAYP 93
LHDGSRTP G WDP+ +TP+R+ Y
Sbjct: 779 SGSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYA 838
Query: 94 MDD--------------------------SFNNSY-PHTPGT--MYGSS--------SEH 116
DD N Y P TPGT MY + S
Sbjct: 839 FDDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQ 898
Query: 117 TSYSPL-------QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGTP 161
SY P Q +PSP+GYQ +HS S + S A+PSPS S P G P
Sbjct: 899 GSYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-GAP 957
Query: 162 SPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGVC 221
SP Y +P TPG+G++Q + +W TTDI+V++ + D + GQ GVIR + G+C
Sbjct: 958 SPGGY-----NPHTPGSGIEQN-SSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGMC 1011
Query: 222 SVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEEDD 281
SVYL + E+ +SI + LEP+ P N+KVKVI+GE +E TGVLLS+D +G+V++ ++
Sbjct: 1012 SVYLKDSEKVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQ 1071
Query: 282 VKMIDVKFLCK 292
+K+++++FL K
Sbjct: 1072 LKILNLRFLGK 1082
>gi|119577300|gb|EAW56896.1| suppressor of Ty 5 homolog (S. cerevisiae), isoform CRA_a [Homo
sapiens]
gi|119577301|gb|EAW56897.1| suppressor of Ty 5 homolog (S. cerevisiae), isoform CRA_a [Homo
sapiens]
gi|119577302|gb|EAW56898.1| suppressor of Ty 5 homolog (S. cerevisiae), isoform CRA_a [Homo
sapiens]
gi|119577303|gb|EAW56899.1| suppressor of Ty 5 homolog (S. cerevisiae), isoform CRA_a [Homo
sapiens]
gi|194382692|dbj|BAG64516.1| unnamed protein product [Homo sapiens]
Length = 946
Score = 163 bits (413), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 154/432 (35%), Positives = 202/432 (46%), Gaps = 148/432 (34%)
Query: 2 TGGF--MSPRISSPMHPSGG-----RGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK 54
GGF MSPRISSPMHPS G G GGG GG G RRD ELIG+T++I+ GPYK
Sbjct: 518 VGGFAPMSPRISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYK 577
Query: 55 ----------------------------------VGSRTPGG-----GATP--------- 66
VGSR PGG G TP
Sbjct: 578 GYIGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMY 637
Query: 67 -----------------------------LHDGSRTP---GPWDPS--STPARSIHNDAY 92
LHDGSRTP G WDP+ +TP+R+ Y
Sbjct: 638 GSGSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEY 697
Query: 93 PMDD--------------------------SFNNSY-PHTPGT--MYGSS--------SE 115
DD N Y P TPGT MY + S
Sbjct: 698 AFDDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSP 757
Query: 116 HTSYSPL-------QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGT 160
SY P Q +PSP+GYQ +HS S + S A+PSPS S P G
Sbjct: 758 QGSYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-GA 816
Query: 161 PSPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGV 220
PSP Y +P TPG+G++Q + +W TTDI+V++ + D + GQ GVIR + G+
Sbjct: 817 PSPGGY-----NPHTPGSGIEQN-SSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGM 870
Query: 221 CSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEED 280
CSVYL + E+ +SI + LEP+ P N+KVKVI+GE +E TGVLLS+D +G+V++ ++
Sbjct: 871 CSVYLKDSEKVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDE 930
Query: 281 DVKMIDVKFLCK 292
+K+++++FL K
Sbjct: 931 QLKILNLRFLGK 942
>gi|403305268|ref|XP_003943189.1| PREDICTED: transcription elongation factor SPT5 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 1083
Score = 163 bits (413), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 153/432 (35%), Positives = 201/432 (46%), Gaps = 148/432 (34%)
Query: 2 TGGF--MSPRISSPMHPSGG-----RGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK 54
GGF MSPRISSPMHPS G G GG GG G RRD ELIG+T++I+ GPYK
Sbjct: 655 VGGFAPMSPRISSPMHPSAGGQRGGFGSPGGSSGGMSRGRGRRDNELIGQTVRISQGPYK 714
Query: 55 ----------------------------------VGSRTPGG-----GATP--------- 66
VGSR PGG G TP
Sbjct: 715 GYIGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMY 774
Query: 67 -----------------------------LHDGSRTP---GPWDPS--STPARSIHNDAY 92
LHDGSRTP G WDP+ +TP+R+ Y
Sbjct: 775 GSGSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEY 834
Query: 93 PMDD--------------------------SFNNSY-PHTPGT--MYGSS--------SE 115
DD N Y P TPGT MY + S
Sbjct: 835 AFDDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSP 894
Query: 116 HTSYSPL-------QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGT 160
SY P Q +PSP+GYQ +HS S + S A+PSPS S P G
Sbjct: 895 QGSYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-GA 953
Query: 161 PSPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGV 220
PSP Y +P TPG+G++Q + +W TTDI+V++ + D + GQ GVIR + G+
Sbjct: 954 PSPGGY-----NPHTPGSGIEQN-SSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGM 1007
Query: 221 CSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEED 280
CSVYL + E+ +SI + LEP+ P N+KVKVI+GE +E TGVLLS+D +G+V++ ++
Sbjct: 1008 CSVYLKDSEKVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDE 1067
Query: 281 DVKMIDVKFLCK 292
+K+++++FL K
Sbjct: 1068 QLKILNLRFLGK 1079
>gi|2723380|dbj|BAA24075.1| DSIF p160 [Homo sapiens]
Length = 1087
Score = 163 bits (413), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 154/432 (35%), Positives = 202/432 (46%), Gaps = 148/432 (34%)
Query: 2 TGGF--MSPRISSPMHPSGG-----RGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK 54
GGF MSPRISSPMHPS G G GGG GG G RRD ELIG+T++I+ GPYK
Sbjct: 659 VGGFAPMSPRISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYK 718
Query: 55 ----------------------------------VGSRTPGG-----GATP--------- 66
VGSR PGG G TP
Sbjct: 719 GYIGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMY 778
Query: 67 -----------------------------LHDGSRTP---GPWDPS--STPARSIHNDAY 92
LHDGSRTP G WDP+ +TP+R+ Y
Sbjct: 779 GSGSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEY 838
Query: 93 PMDD--------------------------SFNNSY-PHTPGT--MYGSS--------SE 115
DD N Y P TPGT MY + S
Sbjct: 839 AFDDEPTRSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSP 898
Query: 116 HTSYSPL-------QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGT 160
SY P Q +PSP+GYQ +HS S + S A+PSPS S P G
Sbjct: 899 QGSYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-GA 957
Query: 161 PSPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGV 220
PSP Y +P TPG+G++Q + +W TTDI+V++ + D + GQ GVIR + G+
Sbjct: 958 PSPGGY-----NPHTPGSGIEQN-SSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGM 1011
Query: 221 CSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEED 280
CSVYL + E+ +SI + LEP+ P N+KVKVI+GE +E TGVLLS+D +G+V++ ++
Sbjct: 1012 CSVYLKDSEKVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDE 1071
Query: 281 DVKMIDVKFLCK 292
+K+++++FL K
Sbjct: 1072 QLKILNLRFLGK 1083
>gi|403305266|ref|XP_003943188.1| PREDICTED: transcription elongation factor SPT5 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403305270|ref|XP_003943190.1| PREDICTED: transcription elongation factor SPT5 isoform 3 [Saimiri
boliviensis boliviensis]
Length = 1087
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 153/432 (35%), Positives = 201/432 (46%), Gaps = 148/432 (34%)
Query: 2 TGGF--MSPRISSPMHPSGG-----RGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK 54
GGF MSPRISSPMHPS G G GG GG G RRD ELIG+T++I+ GPYK
Sbjct: 659 VGGFAPMSPRISSPMHPSAGGQRGGFGSPGGSSGGMSRGRGRRDNELIGQTVRISQGPYK 718
Query: 55 ----------------------------------VGSRTPGG-----GATP--------- 66
VGSR PGG G TP
Sbjct: 719 GYIGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMY 778
Query: 67 -----------------------------LHDGSRTP---GPWDPS--STPARSIHNDAY 92
LHDGSRTP G WDP+ +TP+R+ Y
Sbjct: 779 GSGSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEY 838
Query: 93 PMDD--------------------------SFNNSY-PHTPGT--MYGSS--------SE 115
DD N Y P TPGT MY + S
Sbjct: 839 AFDDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSP 898
Query: 116 HTSYSPL-------QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGT 160
SY P Q +PSP+GYQ +HS S + S A+PSPS S P G
Sbjct: 899 QGSYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-GA 957
Query: 161 PSPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGV 220
PSP Y +P TPG+G++Q + +W TTDI+V++ + D + GQ GVIR + G+
Sbjct: 958 PSPGGY-----NPHTPGSGIEQN-SSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGM 1011
Query: 221 CSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEED 280
CSVYL + E+ +SI + LEP+ P N+KVKVI+GE +E TGVLLS+D +G+V++ ++
Sbjct: 1012 CSVYLKDSEKVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDE 1071
Query: 281 DVKMIDVKFLCK 292
+K+++++FL K
Sbjct: 1072 QLKILNLRFLGK 1083
>gi|332855586|ref|XP_003316394.1| PREDICTED: transcription elongation factor SPT5 isoform 1 [Pan
troglodytes]
Length = 1083
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 154/432 (35%), Positives = 202/432 (46%), Gaps = 148/432 (34%)
Query: 2 TGGF--MSPRISSPMHPSGG-----RGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK 54
GGF MSPRISSPMHPS G G GGG GG G RRD ELIG+T++I+ GPYK
Sbjct: 655 VGGFAPMSPRISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYK 714
Query: 55 ----------------------------------VGSRTPGG-----GATP--------- 66
VGSR PGG G TP
Sbjct: 715 GYIGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMY 774
Query: 67 -----------------------------LHDGSRTP---GPWDPS--STPARSIHNDAY 92
LHDGSRTP G WDP+ +TP+R+ Y
Sbjct: 775 GSGSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEY 834
Query: 93 PMDD--------------------------SFNNSY-PHTPGT--MYGSS--------SE 115
DD N Y P TPGT MY + S
Sbjct: 835 AFDDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSP 894
Query: 116 HTSYSPL-------QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGT 160
SY P Q +PSP+GYQ +HS S + S A+PSPS S P G
Sbjct: 895 QGSYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-GA 953
Query: 161 PSPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGV 220
PSP Y +P TPG+G++Q + +W TTDI+V++ + D + GQ GVIR + G+
Sbjct: 954 PSPGGY-----NPHTPGSGIEQN-SSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGM 1007
Query: 221 CSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEED 280
CSVYL + E+ +SI + LEP+ P N+KVKVI+GE +E TGVLLS+D +G+V++ ++
Sbjct: 1008 CSVYLKDSEKVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDE 1067
Query: 281 DVKMIDVKFLCK 292
+K+++++FL K
Sbjct: 1068 QLKILNLRFLGK 1079
>gi|380798993|gb|AFE71372.1| transcription elongation factor SPT5 isoform a, partial [Macaca
mulatta]
Length = 1035
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 154/432 (35%), Positives = 202/432 (46%), Gaps = 148/432 (34%)
Query: 2 TGGF--MSPRISSPMHPSGG-----RGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK 54
GGF MSPRISSPMHPS G G GGG GG G RRD ELIG+T++I+ GPYK
Sbjct: 607 VGGFAPMSPRISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYK 666
Query: 55 ----------------------------------VGSRTPGG-----GATP--------- 66
VGSR PGG G TP
Sbjct: 667 GYIGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMY 726
Query: 67 -----------------------------LHDGSRTP---GPWDPS--STPARSIHNDAY 92
LHDGSRTP G WDP+ +TP+R+ Y
Sbjct: 727 GSGSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEY 786
Query: 93 PMDD--------------------------SFNNSY-PHTPGT--MYGSS--------SE 115
DD N Y P TPGT MY + S
Sbjct: 787 AFDDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSP 846
Query: 116 HTSYSPL-------QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGT 160
SY P Q +PSP+GYQ +HS S + S A+PSPS S P G
Sbjct: 847 QGSYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-GA 905
Query: 161 PSPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGV 220
PSP Y +P TPG+G++Q + +W TTDI+V++ + D + GQ GVIR + G+
Sbjct: 906 PSPGGY-----NPHTPGSGIEQN-SSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGM 959
Query: 221 CSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEED 280
CSVYL + E+ +SI + LEP+ P N+KVKVI+GE +E TGVLLS+D +G+V++ ++
Sbjct: 960 CSVYLKDSEKVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDE 1019
Query: 281 DVKMIDVKFLCK 292
+K+++++FL K
Sbjct: 1020 QLKILNLRFLGK 1031
>gi|441652999|ref|XP_003270421.2| PREDICTED: transcription elongation factor SPT5 isoform 2 [Nomascus
leucogenys]
Length = 1087
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 154/432 (35%), Positives = 202/432 (46%), Gaps = 148/432 (34%)
Query: 2 TGGF--MSPRISSPMHPSGG-----RGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK 54
GGF MSPRISSPMHPS G G GGG GG G RRD ELIG+T++I+ GPYK
Sbjct: 659 VGGFAPMSPRISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYK 718
Query: 55 ----------------------------------VGSRTPGG-----GATP--------- 66
VGSR PGG G TP
Sbjct: 719 GYIGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMY 778
Query: 67 -----------------------------LHDGSRTP---GPWDPS--STPARSIHNDAY 92
LHDGSRTP G WDP+ +TP+R+ Y
Sbjct: 779 GSGSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEY 838
Query: 93 PMDD--------------------------SFNNSY-PHTPGT--MYGSS--------SE 115
DD N Y P TPGT MY + S
Sbjct: 839 AFDDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSP 898
Query: 116 HTSYSPL-------QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGT 160
SY P Q +PSP+GYQ +HS S + S A+PSPS S P G
Sbjct: 899 QGSYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-GA 957
Query: 161 PSPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGV 220
PSP Y +P TPG+G++Q + +W TTDI+V++ + D + GQ GVIR + G+
Sbjct: 958 PSPGGY-----NPHTPGSGIEQN-SSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGM 1011
Query: 221 CSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEED 280
CSVYL + E+ +SI + LEP+ P N+KVKVI+GE +E TGVLLS+D +G+V++ ++
Sbjct: 1012 CSVYLKDSEKVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDE 1071
Query: 281 DVKMIDVKFLCK 292
+K+++++FL K
Sbjct: 1072 QLKILNLRFLGK 1083
>gi|426388680|ref|XP_004060761.1| PREDICTED: transcription elongation factor SPT5 isoform 1 [Gorilla
gorilla gorilla]
Length = 1140
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 154/432 (35%), Positives = 202/432 (46%), Gaps = 148/432 (34%)
Query: 2 TGGF--MSPRISSPMHPSGG-----RGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK 54
GGF MSPRISSPMHPS G G GGG GG G RRD ELIG+T++I+ GPYK
Sbjct: 712 VGGFAPMSPRISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYK 771
Query: 55 ----------------------------------VGSRTPGG-----GATP--------- 66
VGSR PGG G TP
Sbjct: 772 GYIGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMY 831
Query: 67 -----------------------------LHDGSRTP---GPWDPS--STPARSIHNDAY 92
LHDGSRTP G WDP+ +TP+R+ Y
Sbjct: 832 GSGSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEY 891
Query: 93 PMDD--------------------------SFNNSY-PHTPGT--MYGSS--------SE 115
DD N Y P TPGT MY + S
Sbjct: 892 AFDDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSP 951
Query: 116 HTSYSPL-------QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGT 160
SY P Q +PSP+GYQ +HS S + S A+PSPS S P G
Sbjct: 952 QGSYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-GA 1010
Query: 161 PSPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGV 220
PSP Y +P TPG+G++Q + +W TTDI+V++ + D + GQ GVIR + G+
Sbjct: 1011 PSPGGY-----NPHTPGSGIEQN-SSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGM 1064
Query: 221 CSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEED 280
CSVYL + E+ +SI + LEP+ P N+KVKVI+GE +E TGVLLS+D +G+V++ ++
Sbjct: 1065 CSVYLKDSEKVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDE 1124
Query: 281 DVKMIDVKFLCK 292
+K+++++FL K
Sbjct: 1125 QLKILNLRFLGK 1136
>gi|355703540|gb|EHH30031.1| hypothetical protein EGK_10603 [Macaca mulatta]
Length = 1087
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 154/432 (35%), Positives = 202/432 (46%), Gaps = 148/432 (34%)
Query: 2 TGGF--MSPRISSPMHPSGG-----RGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK 54
GGF MSPRISSPMHPS G G GGG GG G RRD ELIG+T++I+ GPYK
Sbjct: 659 VGGFAPMSPRISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYK 718
Query: 55 ----------------------------------VGSRTPGG-----GATP--------- 66
VGSR PGG G TP
Sbjct: 719 GYIGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMY 778
Query: 67 -----------------------------LHDGSRTP---GPWDPS--STPARSIHNDAY 92
LHDGSRTP G WDP+ +TP+R+ Y
Sbjct: 779 GSGSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEY 838
Query: 93 PMDD--------------------------SFNNSY-PHTPGT--MYGSS--------SE 115
DD N Y P TPGT MY + S
Sbjct: 839 AFDDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSP 898
Query: 116 HTSYSPL-------QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGT 160
SY P Q +PSP+GYQ +HS S + S A+PSPS S P G
Sbjct: 899 QGSYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-GA 957
Query: 161 PSPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGV 220
PSP Y +P TPG+G++Q + +W TTDI+V++ + D + GQ GVIR + G+
Sbjct: 958 PSPGGY-----NPHTPGSGIEQN-SSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGM 1011
Query: 221 CSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEED 280
CSVYL + E+ +SI + LEP+ P N+KVKVI+GE +E TGVLLS+D +G+V++ ++
Sbjct: 1012 CSVYLKDSEKVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDE 1071
Query: 281 DVKMIDVKFLCK 292
+K+++++FL K
Sbjct: 1072 QLKILNLRFLGK 1083
>gi|380798991|gb|AFE71371.1| transcription elongation factor SPT5 isoform b, partial [Macaca
mulatta]
Length = 1031
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 154/432 (35%), Positives = 202/432 (46%), Gaps = 148/432 (34%)
Query: 2 TGGF--MSPRISSPMHPSGG-----RGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK 54
GGF MSPRISSPMHPS G G GGG GG G RRD ELIG+T++I+ GPYK
Sbjct: 603 VGGFAPMSPRISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYK 662
Query: 55 ----------------------------------VGSRTPGG-----GATP--------- 66
VGSR PGG G TP
Sbjct: 663 GYIGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMY 722
Query: 67 -----------------------------LHDGSRTP---GPWDPS--STPARSIHNDAY 92
LHDGSRTP G WDP+ +TP+R+ Y
Sbjct: 723 GSGSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEY 782
Query: 93 PMDD--------------------------SFNNSY-PHTPGT--MYGSS--------SE 115
DD N Y P TPGT MY + S
Sbjct: 783 AFDDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSP 842
Query: 116 HTSYSPL-------QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGT 160
SY P Q +PSP+GYQ +HS S + S A+PSPS S P G
Sbjct: 843 QGSYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-GA 901
Query: 161 PSPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGV 220
PSP Y +P TPG+G++Q + +W TTDI+V++ + D + GQ GVIR + G+
Sbjct: 902 PSPGGY-----NPHTPGSGIEQN-SSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGM 955
Query: 221 CSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEED 280
CSVYL + E+ +SI + LEP+ P N+KVKVI+GE +E TGVLLS+D +G+V++ ++
Sbjct: 956 CSVYLKDSEKVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDE 1015
Query: 281 DVKMIDVKFLCK 292
+K+++++FL K
Sbjct: 1016 QLKILNLRFLGK 1027
>gi|417405815|gb|JAA49607.1| Putative rna polymerase ii transcription elongation factor
dsif/supt5h/spt5 [Desmodus rotundus]
Length = 1087
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 153/432 (35%), Positives = 201/432 (46%), Gaps = 148/432 (34%)
Query: 2 TGGF--MSPRISSPMHPSGG-----RGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK 54
GGF MSPRISSPMHPS G G GG GG G RRD ELIG+T++I+ GPYK
Sbjct: 659 VGGFAPMSPRISSPMHPSAGGQRGGFGSPGGSSGGMSRGRGRRDNELIGQTVRISQGPYK 718
Query: 55 ----------------------------------VGSRTPGG-----GATP--------- 66
VGSR PGG G TP
Sbjct: 719 GYIGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMY 778
Query: 67 -----------------------------LHDGSRTP---GPWDPS--STPARSIHNDAY 92
LHDGSRTP G WDP+ +TP+R+ Y
Sbjct: 779 GSGSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEY 838
Query: 93 PMDD--------------------------SFNNSY-PHTPGT--MYGSS--------SE 115
DD N Y P TPGT MY + S
Sbjct: 839 AFDDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSP 898
Query: 116 HTSYSPL-------QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGT 160
SY P Q +PSP+GYQ +HS S + S A+PSPS S P G
Sbjct: 899 QGSYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-GA 957
Query: 161 PSPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGV 220
PSP Y +P TPG+G++Q + +W TTDI+V++ + D + GQ GVIR + G+
Sbjct: 958 PSPGGY-----NPHTPGSGIEQN-SSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGM 1011
Query: 221 CSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEED 280
CSVYL + E+ +SI + LEP+ P N+KVKVI+GE +E TGVLLS+D +G+V++ ++
Sbjct: 1012 CSVYLKDSEKVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDE 1071
Query: 281 DVKMIDVKFLCK 292
+K+++++FL K
Sbjct: 1072 QLKILNLRFLGK 1083
>gi|335289667|ref|XP_003355949.1| PREDICTED: transcription elongation factor SPT5 isoform 1 [Sus
scrofa]
gi|335289669|ref|XP_003355950.1| PREDICTED: transcription elongation factor SPT5 isoform 2 [Sus
scrofa]
gi|335289671|ref|XP_003355951.1| PREDICTED: transcription elongation factor SPT5 isoform 3 [Sus
scrofa]
Length = 1087
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 154/432 (35%), Positives = 202/432 (46%), Gaps = 148/432 (34%)
Query: 2 TGGF--MSPRISSPMHPSGG-----RGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK 54
GGF MSPRISSPMHPS G G GGG GG G RRD ELIG+T++I+ GPYK
Sbjct: 659 VGGFAPMSPRISSPMHPSAGGQRGGFGSPGGGGGGMSRGRGRRDNELIGQTVRISQGPYK 718
Query: 55 ----------------------------------VGSRTPGG-----GATP--------- 66
VGSR PGG G TP
Sbjct: 719 GYIGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMY 778
Query: 67 -----------------------------LHDGSRTP---GPWDPS--STPARSIHNDAY 92
LHDGSRTP G WDP+ +TP+R+ Y
Sbjct: 779 GSGSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEY 838
Query: 93 PMDD--------------------------SFNNSY-PHTPGT--MYGSS--------SE 115
DD N Y P TPGT MY + S
Sbjct: 839 AFDDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSP 898
Query: 116 HTSYSPL-------QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGT 160
SY P Q +PSP+GYQ +HS S + S A+PSPS S P G
Sbjct: 899 QGSYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-GA 957
Query: 161 PSPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGV 220
PSP Y +P TPG+G++Q + +W TTDI+V++ + D + GQ GVIR + G+
Sbjct: 958 PSPGGY-----NPHTPGSGIEQN-SSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGM 1011
Query: 221 CSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEED 280
CSVYL + E+ +SI + LEP+ P N+KVKVI+GE +E TGVLLS+D +G+V++ ++
Sbjct: 1012 CSVYLKDSEKVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDE 1071
Query: 281 DVKMIDVKFLCK 292
+K+++++FL K
Sbjct: 1072 QLKILNLRFLGK 1083
>gi|332855584|ref|XP_512652.3| PREDICTED: transcription elongation factor SPT5 isoform 2 [Pan
troglodytes]
gi|397482119|ref|XP_003812280.1| PREDICTED: transcription elongation factor SPT5 isoform 1 [Pan
paniscus]
gi|397482121|ref|XP_003812281.1| PREDICTED: transcription elongation factor SPT5 isoform 2 [Pan
paniscus]
gi|410264254|gb|JAA20093.1| suppressor of Ty 5 homolog [Pan troglodytes]
gi|410302772|gb|JAA29986.1| suppressor of Ty 5 homolog [Pan troglodytes]
gi|410302774|gb|JAA29987.1| suppressor of Ty 5 homolog [Pan troglodytes]
Length = 1087
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 154/432 (35%), Positives = 202/432 (46%), Gaps = 148/432 (34%)
Query: 2 TGGF--MSPRISSPMHPSGG-----RGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK 54
GGF MSPRISSPMHPS G G GGG GG G RRD ELIG+T++I+ GPYK
Sbjct: 659 VGGFAPMSPRISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYK 718
Query: 55 ----------------------------------VGSRTPGG-----GATP--------- 66
VGSR PGG G TP
Sbjct: 719 GYIGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMY 778
Query: 67 -----------------------------LHDGSRTP---GPWDPS--STPARSIHNDAY 92
LHDGSRTP G WDP+ +TP+R+ Y
Sbjct: 779 GSGSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEY 838
Query: 93 PMDD--------------------------SFNNSY-PHTPGT--MYGSS--------SE 115
DD N Y P TPGT MY + S
Sbjct: 839 AFDDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSP 898
Query: 116 HTSYSPL-------QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGT 160
SY P Q +PSP+GYQ +HS S + S A+PSPS S P G
Sbjct: 899 QGSYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-GA 957
Query: 161 PSPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGV 220
PSP Y +P TPG+G++Q + +W TTDI+V++ + D + GQ GVIR + G+
Sbjct: 958 PSPGGY-----NPHTPGSGIEQN-SSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGM 1011
Query: 221 CSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEED 280
CSVYL + E+ +SI + LEP+ P N+KVKVI+GE +E TGVLLS+D +G+V++ ++
Sbjct: 1012 CSVYLKDSEKVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDE 1071
Query: 281 DVKMIDVKFLCK 292
+K+++++FL K
Sbjct: 1072 QLKILNLRFLGK 1083
>gi|388490406|ref|NP_001253880.1| transcription elongation factor SPT5 [Macaca mulatta]
gi|402905510|ref|XP_003915562.1| PREDICTED: transcription elongation factor SPT5 [Papio anubis]
gi|383411229|gb|AFH28828.1| transcription elongation factor SPT5 isoform a [Macaca mulatta]
Length = 1087
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 154/432 (35%), Positives = 202/432 (46%), Gaps = 148/432 (34%)
Query: 2 TGGF--MSPRISSPMHPSGG-----RGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK 54
GGF MSPRISSPMHPS G G GGG GG G RRD ELIG+T++I+ GPYK
Sbjct: 659 VGGFAPMSPRISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYK 718
Query: 55 ----------------------------------VGSRTPGG-----GATP--------- 66
VGSR PGG G TP
Sbjct: 719 GYIGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMY 778
Query: 67 -----------------------------LHDGSRTP---GPWDPS--STPARSIHNDAY 92
LHDGSRTP G WDP+ +TP+R+ Y
Sbjct: 779 GSGSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEY 838
Query: 93 PMDD--------------------------SFNNSY-PHTPGT--MYGSS--------SE 115
DD N Y P TPGT MY + S
Sbjct: 839 AFDDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSP 898
Query: 116 HTSYSPL-------QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGT 160
SY P Q +PSP+GYQ +HS S + S A+PSPS S P G
Sbjct: 899 QGSYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-GA 957
Query: 161 PSPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGV 220
PSP Y +P TPG+G++Q + +W TTDI+V++ + D + GQ GVIR + G+
Sbjct: 958 PSPGGY-----NPHTPGSGIEQN-SSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGM 1011
Query: 221 CSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEED 280
CSVYL + E+ +SI + LEP+ P N+KVKVI+GE +E TGVLLS+D +G+V++ ++
Sbjct: 1012 CSVYLKDSEKVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDE 1071
Query: 281 DVKMIDVKFLCK 292
+K+++++FL K
Sbjct: 1072 QLKILNLRFLGK 1083
>gi|73947648|ref|XP_533673.2| PREDICTED: transcription elongation factor SPT5 isoform 1 [Canis
lupus familiaris]
Length = 1087
Score = 163 bits (412), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 154/432 (35%), Positives = 202/432 (46%), Gaps = 148/432 (34%)
Query: 2 TGGF--MSPRISSPMHPSGG-----RGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK 54
GGF MSPRISSPMHPS G G GGG GG G RRD ELIG+T++I+ GPYK
Sbjct: 659 VGGFAPMSPRISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYK 718
Query: 55 ----------------------------------VGSRTPGG-----GATP--------- 66
VGSR PGG G TP
Sbjct: 719 GYIGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMY 778
Query: 67 -----------------------------LHDGSRTP---GPWDPS--STPARSIHNDAY 92
LHDGSRTP G WDP+ +TP+R+ Y
Sbjct: 779 GSGSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEY 838
Query: 93 PMDD--------------------------SFNNSY-PHTPGT--MYGSS--------SE 115
DD N Y P TPGT MY + S
Sbjct: 839 AFDDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSP 898
Query: 116 HTSYSPL-------QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGT 160
SY P Q +PSP+GYQ +HS S + S A+PSPS S P G
Sbjct: 899 QGSYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-GA 957
Query: 161 PSPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGV 220
PSP Y +P TPG+G++Q + +W TTDI+V++ + D + GQ GVIR + G+
Sbjct: 958 PSPGGY-----NPHTPGSGIEQN-SSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGM 1011
Query: 221 CSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEED 280
CSVYL + E+ +SI + LEP+ P N+KVKVI+GE +E TGVLLS+D +G+V++ ++
Sbjct: 1012 CSVYLKDSEKVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDE 1071
Query: 281 DVKMIDVKFLCK 292
+K+++++FL K
Sbjct: 1072 QLKILNLRFLGK 1083
>gi|410983050|ref|XP_003997857.1| PREDICTED: transcription elongation factor SPT5 isoform 1 [Felis
catus]
gi|410983052|ref|XP_003997858.1| PREDICTED: transcription elongation factor SPT5 isoform 2 [Felis
catus]
gi|355722676|gb|AES07650.1| suppressor of Ty 5-like protein [Mustela putorius furo]
Length = 1087
Score = 163 bits (412), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 154/432 (35%), Positives = 202/432 (46%), Gaps = 148/432 (34%)
Query: 2 TGGF--MSPRISSPMHPSGG-----RGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK 54
GGF MSPRISSPMHPS G G GGG GG G RRD ELIG+T++I+ GPYK
Sbjct: 659 VGGFAPMSPRISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYK 718
Query: 55 ----------------------------------VGSRTPGG-----GATP--------- 66
VGSR PGG G TP
Sbjct: 719 GYIGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMY 778
Query: 67 -----------------------------LHDGSRTP---GPWDPS--STPARSIHNDAY 92
LHDGSRTP G WDP+ +TP+R+ Y
Sbjct: 779 GSGSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEY 838
Query: 93 PMDD--------------------------SFNNSY-PHTPGT--MYGSS--------SE 115
DD N Y P TPGT MY + S
Sbjct: 839 AFDDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSP 898
Query: 116 HTSYSPL-------QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGT 160
SY P Q +PSP+GYQ +HS S + S A+PSPS S P G
Sbjct: 899 QGSYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-GA 957
Query: 161 PSPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGV 220
PSP Y +P TPG+G++Q + +W TTDI+V++ + D + GQ GVIR + G+
Sbjct: 958 PSPGGY-----NPHTPGSGIEQN-SSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGM 1011
Query: 221 CSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEED 280
CSVYL + E+ +SI + LEP+ P N+KVKVI+GE +E TGVLLS+D +G+V++ ++
Sbjct: 1012 CSVYLKDSEKVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDE 1071
Query: 281 DVKMIDVKFLCK 292
+K+++++FL K
Sbjct: 1072 QLKILNLRFLGK 1083
>gi|194382222|dbj|BAG58866.1| unnamed protein product [Homo sapiens]
Length = 879
Score = 163 bits (412), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 154/432 (35%), Positives = 202/432 (46%), Gaps = 148/432 (34%)
Query: 2 TGGF--MSPRISSPMHPSGG-----RGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK 54
GGF MSPRISSPMHPS G G GGG GG G RRD ELIG+T++I+ GPYK
Sbjct: 451 VGGFAPMSPRISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYK 510
Query: 55 ----------------------------------VGSRTPGG-----GATP--------- 66
VGSR PGG G TP
Sbjct: 511 GYIGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMY 570
Query: 67 -----------------------------LHDGSRTP---GPWDPS--STPARSIHNDAY 92
LHDGSRTP G WDP+ +TP+R+ Y
Sbjct: 571 GSGSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEY 630
Query: 93 PMDD--------------------------SFNNSY-PHTPGT--MYGSS--------SE 115
DD N Y P TPGT MY + S
Sbjct: 631 AFDDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSP 690
Query: 116 HTSYSPL-------QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGT 160
SY P Q +PSP+GYQ +HS S + S A+PSPS S P G
Sbjct: 691 QGSYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-GA 749
Query: 161 PSPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGV 220
PSP Y +P TPG+G++Q + +W TTDI+V++ + D + GQ GVIR + G+
Sbjct: 750 PSPGGY-----NPHTPGSGIEQN-SSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGM 803
Query: 221 CSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEED 280
CSVYL + E+ +SI + LEP+ P N+KVKVI+GE +E TGVLLS+D +G+V++ ++
Sbjct: 804 CSVYLKDSEKVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDE 863
Query: 281 DVKMIDVKFLCK 292
+K+++++FL K
Sbjct: 864 QLKILNLRFLGK 875
>gi|431920164|gb|ELK18203.1| Transcription elongation factor SPT5 [Pteropus alecto]
Length = 1083
Score = 163 bits (412), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 153/432 (35%), Positives = 201/432 (46%), Gaps = 148/432 (34%)
Query: 2 TGGF--MSPRISSPMHPSGG-----RGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK 54
GGF MSPRISSPMHPS G G GG GG G RRD ELIG+T++I+ GPYK
Sbjct: 655 VGGFAPMSPRISSPMHPSAGGQRGGFGSPGGSSGGMSRGRGRRDNELIGQTVRISQGPYK 714
Query: 55 ----------------------------------VGSRTPGG-----GATP--------- 66
VGSR PGG G TP
Sbjct: 715 GYIGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMY 774
Query: 67 -----------------------------LHDGSRTP---GPWDPS--STPARSIHNDAY 92
LHDGSRTP G WDP+ +TP+R+ Y
Sbjct: 775 GSGSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEY 834
Query: 93 PMDD--------------------------SFNNSY-PHTPGT--MYGSS--------SE 115
DD N Y P TPGT MY + S
Sbjct: 835 AFDDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSP 894
Query: 116 HTSYSPL-------QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGT 160
SY P Q +PSP+GYQ +HS S + S A+PSPS S P G
Sbjct: 895 QGSYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-GA 953
Query: 161 PSPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGV 220
PSP Y +P TPG+G++Q + +W TTDI+V++ + D + GQ GVIR + G+
Sbjct: 954 PSPGGY-----NPHTPGSGIEQN-SSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGM 1007
Query: 221 CSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEED 280
CSVYL + E+ +SI + LEP+ P N+KVKVI+GE +E TGVLLS+D +G+V++ ++
Sbjct: 1008 CSVYLKDSEKVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDPDE 1067
Query: 281 DVKMIDVKFLCK 292
+K+++++FL K
Sbjct: 1068 QLKILNLRFLGK 1079
>gi|384939612|gb|AFI33411.1| transcription elongation factor SPT5 isoform a [Macaca mulatta]
Length = 1087
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 154/432 (35%), Positives = 202/432 (46%), Gaps = 148/432 (34%)
Query: 2 TGGF--MSPRISSPMHPSGG-----RGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK 54
GGF MSPRISSPMHPS G G GGG GG G RRD ELIG+T++I+ GPYK
Sbjct: 659 VGGFAPMSPRISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYK 718
Query: 55 ----------------------------------VGSRTPGG-----GATP--------- 66
VGSR PGG G TP
Sbjct: 719 GYIGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMY 778
Query: 67 -----------------------------LHDGSRTP---GPWDPS--STPARSIHNDAY 92
LHDGSRTP G WDP+ +TP+R+ Y
Sbjct: 779 GSGSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEY 838
Query: 93 PMDD--------------------------SFNNSY-PHTPGT--MYGSS--------SE 115
DD N Y P TPGT MY + S
Sbjct: 839 AFDDEPTPSPQAYGGTPNPQTPGYPDPPSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSP 898
Query: 116 HTSYSPL-------QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGT 160
SY P Q +PSP+GYQ +HS S + S A+PSPS S P G
Sbjct: 899 QGSYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-GA 957
Query: 161 PSPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGV 220
PSP Y +P TPG+G++Q + +W TTDI+V++ + D + GQ GVIR + G+
Sbjct: 958 PSPGGY-----NPHTPGSGIEQN-SSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGM 1011
Query: 221 CSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEED 280
CSVYL + E+ +SI + LEP+ P N+KVKVI+GE +E TGVLLS+D +G+V++ ++
Sbjct: 1012 CSVYLKDSEKVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDE 1071
Query: 281 DVKMIDVKFLCK 292
+K+++++FL K
Sbjct: 1072 QLKILNLRFLGK 1083
>gi|37589282|gb|AAH58598.1| Suppressor of Ty 5 homolog (S. cerevisiae) [Mus musculus]
Length = 1082
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 149/429 (34%), Positives = 198/429 (46%), Gaps = 145/429 (33%)
Query: 2 TGGF--MSPRISSPMHPSG-GRGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK---- 54
GGF MSPRISSPMHPS G+ G G GG G RRD ELIG+T++I+ GPYK
Sbjct: 657 VGGFTPMSPRISSPMHPSAEGQHGGFGSPGGMSRGRGRRDNELIGQTVRISQGPYKGYIG 716
Query: 55 ------------------------------VGSRTPGG---------------------- 62
V S+ PGG
Sbjct: 717 VVKDATESTARVELHSTCQTISVDRQRLTTVDSQRPGGMTSTYGRTPMYGSQTPMYGSGS 776
Query: 63 ------GATPLHDGSRTP------------------GPWDPS--STPARSIHNDAYPMDD 96
TPL DGSRTP G WDP+ +TP+R+ Y DD
Sbjct: 777 RTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDD 836
Query: 97 --------------------------SFNNSY-PHTPGT--MYGSS--------SEHTSY 119
N Y P TPGT MY + S SY
Sbjct: 837 EPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSY 896
Query: 120 SPL-------QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGTPSPL 164
P Q +PSP+GYQ +HS S + S A+PSPS S P G PSP
Sbjct: 897 QPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-GAPSPG 955
Query: 165 SYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGVCSVY 224
Y +P TPG+G++Q + +W TTDI+V++ + D + GQ GVIR + G+CSVY
Sbjct: 956 GY-----NPHTPGSGIEQN-SSDWVTTDIQVKVRDTYLDTQIVGQTGVIRSVTGGMCSVY 1009
Query: 225 LAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEED-DVK 283
L + E+ +SI + LEP+ P N+KVKVI+GE +E TGVLLS+D +G++++ ED +K
Sbjct: 1010 LKDSEKVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIIRMDLEDQQIK 1069
Query: 284 MIDVKFLCK 292
+++++FL K
Sbjct: 1070 ILNLRFLGK 1078
>gi|35505439|gb|AAH57449.1| Supt5h protein, partial [Mus musculus]
Length = 1098
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 149/429 (34%), Positives = 198/429 (46%), Gaps = 145/429 (33%)
Query: 2 TGGF--MSPRISSPMHPSG-GRGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK---- 54
GGF MSPRISSPMHPS G+ G G GG G RRD ELIG+T++I+ GPYK
Sbjct: 673 VGGFTPMSPRISSPMHPSAEGQHGGFGSPGGMSRGRGRRDNELIGQTVRISQGPYKGYIG 732
Query: 55 ------------------------------VGSRTPGG---------------------- 62
V S+ PGG
Sbjct: 733 VVKDATESTARVELHSTCQTISVDRQRLTTVDSQRPGGMTSTYGRTPMYGSQTPMYGSGS 792
Query: 63 ------GATPLHDGSRTP------------------GPWDPS--STPARSIHNDAYPMDD 96
TPL DGSRTP G WDP+ +TP+R+ Y DD
Sbjct: 793 RTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDD 852
Query: 97 --------------------------SFNNSY-PHTPGT--MYGSS--------SEHTSY 119
N Y P TPGT MY + S SY
Sbjct: 853 EPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSY 912
Query: 120 SPL-------QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGTPSPL 164
P Q +PSP+GYQ +HS S + S A+PSPS S P G PSP
Sbjct: 913 QPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-GAPSPG 971
Query: 165 SYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGVCSVY 224
Y +P TPG+G++Q + +W TTDI+V++ + D + GQ GVIR + G+CSVY
Sbjct: 972 GY-----NPHTPGSGIEQN-SSDWVTTDIQVKVRDTYLDTQIVGQTGVIRSVTGGMCSVY 1025
Query: 225 LAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEED-DVK 283
L + E+ +SI + LEP+ P N+KVKVI+GE +E TGVLLS+D +G++++ ED +K
Sbjct: 1026 LKDSEKVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIIRMDLEDQQIK 1085
Query: 284 MIDVKFLCK 292
+++++FL K
Sbjct: 1086 ILNLRFLGK 1094
>gi|74144580|dbj|BAE27278.1| unnamed protein product [Mus musculus]
Length = 1082
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 149/429 (34%), Positives = 198/429 (46%), Gaps = 145/429 (33%)
Query: 2 TGGF--MSPRISSPMHPSG-GRGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK---- 54
GGF MSPRISSPMHPS G+ G G GG G RRD ELIG+T++I+ GPYK
Sbjct: 657 VGGFTPMSPRISSPMHPSAEGQHGGFGSPGGMSRGRGRRDNELIGQTVRISQGPYKGYIG 716
Query: 55 ------------------------------VGSRTPGG---------------------- 62
V S+ PGG
Sbjct: 717 VVKDATESTARVELHSTCQTISVDRQRLTTVDSQRPGGMTSTYGRTPMYGSQTPMYGSGS 776
Query: 63 ------GATPLHDGSRTP------------------GPWDPS--STPARSIHNDAYPMDD 96
TPL DGSRTP G WDP+ +TP+R+ Y DD
Sbjct: 777 RTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDD 836
Query: 97 --------------------------SFNNSY-PHTPGT--MYGSS--------SEHTSY 119
N Y P TPGT MY + S SY
Sbjct: 837 EPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSY 896
Query: 120 SPL-------QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGTPSPL 164
P Q +PSP+GYQ +HS S + S A+PSPS S P G PSP
Sbjct: 897 QPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-GAPSPG 955
Query: 165 SYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGVCSVY 224
Y +P TPG+G++Q + +W TTDI+V++ + D + GQ GVIR + G+CSVY
Sbjct: 956 GY-----NPHTPGSGIEQN-SSDWVTTDIQVKVRDTYLDTQIVGQTGVIRSVTGGMCSVY 1009
Query: 225 LAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEED-DVK 283
L + E+ +SI + LEP+ P N+KVKVI+GE +E TGVLLS+D +G++++ ED +K
Sbjct: 1010 LKDSEKVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIIRMDLEDQQIK 1069
Query: 284 MIDVKFLCK 292
+++++FL K
Sbjct: 1070 ILNLRFLGK 1078
>gi|22094123|ref|NP_038704.1| transcription elongation factor SPT5 [Mus musculus]
gi|81882162|sp|O55201.1|SPT5H_MOUSE RecName: Full=Transcription elongation factor SPT5; AltName: Full=DRB
sensitivity-inducing factor large subunit; Short=DSIF
large subunit
gi|2754752|gb|AAC40052.1| chromatin structural protein homolog Supt5hp [Mus musculus]
gi|13938032|gb|AAH07132.1| Suppressor of Ty 5 homolog (S. cerevisiae) [Mus musculus]
gi|74144699|dbj|BAE27330.1| unnamed protein product [Mus musculus]
Length = 1082
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 149/429 (34%), Positives = 198/429 (46%), Gaps = 145/429 (33%)
Query: 2 TGGF--MSPRISSPMHPSG-GRGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK---- 54
GGF MSPRISSPMHPS G+ G G GG G RRD ELIG+T++I+ GPYK
Sbjct: 657 VGGFTPMSPRISSPMHPSAEGQHGGFGSPGGMSRGRGRRDNELIGQTVRISQGPYKGYIG 716
Query: 55 ------------------------------VGSRTPGG---------------------- 62
V S+ PGG
Sbjct: 717 VVKDATESTARVELHSTCQTISVDRQRLTTVDSQRPGGMTSTYGRTPMYGSQTPMYGSGS 776
Query: 63 ------GATPLHDGSRTP------------------GPWDPS--STPARSIHNDAYPMDD 96
TPL DGSRTP G WDP+ +TP+R+ Y DD
Sbjct: 777 RTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDD 836
Query: 97 --------------------------SFNNSY-PHTPGT--MYGSS--------SEHTSY 119
N Y P TPGT MY + S SY
Sbjct: 837 EPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSY 896
Query: 120 SPL-------QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGTPSPL 164
P Q +PSP+GYQ +HS S + S A+PSPS S P G PSP
Sbjct: 897 QPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-GAPSPG 955
Query: 165 SYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGVCSVY 224
Y +P TPG+G++Q + +W TTDI+V++ + D + GQ GVIR + G+CSVY
Sbjct: 956 GY-----NPHTPGSGIEQN-SSDWVTTDIQVKVRDTYLDTQIVGQTGVIRSVTGGMCSVY 1009
Query: 225 LAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEED-DVK 283
L + E+ +SI + LEP+ P N+KVKVI+GE +E TGVLLS+D +G++++ ED +K
Sbjct: 1010 LKDSEKVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIIRMDLEDQQIK 1069
Query: 284 MIDVKFLCK 292
+++++FL K
Sbjct: 1070 ILNLRFLGK 1078
>gi|197097560|ref|NP_001127053.1| transcription elongation factor SPT5 [Pongo abelii]
gi|75040884|sp|Q5R405.1|SPT5H_PONAB RecName: Full=Transcription elongation factor SPT5; AltName: Full=DRB
sensitivity-inducing factor large subunit; Short=DSIF
large subunit
gi|55733669|emb|CAH93511.1| hypothetical protein [Pongo abelii]
Length = 1083
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 154/432 (35%), Positives = 202/432 (46%), Gaps = 148/432 (34%)
Query: 2 TGGF--MSPRISSPMHPSGG-----RGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK 54
GGF MSPRISSPMHPS G G GGG GG G RRD ELIG+T++I+ GPYK
Sbjct: 655 VGGFAPMSPRISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYK 714
Query: 55 ----------------------------------VGSRTPGG-----GATP--------- 66
VGSR PGG G TP
Sbjct: 715 GYIGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMY 774
Query: 67 -----------------------------LHDGSRTP---GPWDPS--STPARSIHNDAY 92
LHDGSRTP G WDP+ +TP+R+ Y
Sbjct: 775 GSGSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEY 834
Query: 93 PMDD--------------------------SFNNSY-PHTPGT--MYGSS--------SE 115
DD N Y P TPGT MY + S
Sbjct: 835 AFDDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSP 894
Query: 116 HTSYSPL-------QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGT 160
SY P Q +PSP+GYQ +HS S + S A+PSPS S P G
Sbjct: 895 QGSYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-GA 953
Query: 161 PSPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGV 220
PSP Y +P TPG+G++Q + +W TTDI+V++ + D + GQ GVIR + G+
Sbjct: 954 PSPGGY-----NPHTPGSGIEQN-SSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGM 1007
Query: 221 CSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEED 280
CSVYL + E+ +SI + LEP+ P N+KVKVI+GE +E TGVLLS+D +G+V++ ++
Sbjct: 1008 CSVYLKDSEKVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDPDE 1067
Query: 281 DVKMIDVKFLCK 292
+K+++++FL K
Sbjct: 1068 QLKILNLRFLGK 1079
>gi|403044506|ref|NP_001100967.2| transcription elongation factor SPT5 [Rattus norvegicus]
gi|392337506|ref|XP_003753275.1| PREDICTED: transcription elongation factor SPT5 [Rattus norvegicus]
gi|74203110|dbj|BAE26244.1| unnamed protein product [Mus musculus]
Length = 1083
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 149/429 (34%), Positives = 198/429 (46%), Gaps = 145/429 (33%)
Query: 2 TGGF--MSPRISSPMHPSG-GRGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK---- 54
GGF MSPRISSPMHPS G+ G G GG G RRD ELIG+T++I+ GPYK
Sbjct: 658 VGGFTPMSPRISSPMHPSAEGQHGGFGSPGGMSRGRGRRDNELIGQTVRISQGPYKGYIG 717
Query: 55 ------------------------------VGSRTPGG---------------------- 62
V S+ PGG
Sbjct: 718 VVKDATESTARVELHSTCQTISVDRQRLTTVDSQRPGGMTSTYGRTPMYGSQTPMYGSGS 777
Query: 63 ------GATPLHDGSRTP------------------GPWDPS--STPARSIHNDAYPMDD 96
TPL DGSRTP G WDP+ +TP+R+ Y DD
Sbjct: 778 RTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDD 837
Query: 97 --------------------------SFNNSY-PHTPGT--MYGSS--------SEHTSY 119
N Y P TPGT MY + S SY
Sbjct: 838 EPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSY 897
Query: 120 SPL-------QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGTPSPL 164
P Q +PSP+GYQ +HS S + S A+PSPS S P G PSP
Sbjct: 898 QPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-GAPSPG 956
Query: 165 SYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGVCSVY 224
Y +P TPG+G++Q + +W TTDI+V++ + D + GQ GVIR + G+CSVY
Sbjct: 957 GY-----NPHTPGSGIEQN-SSDWVTTDIQVKVRDTYLDTQIVGQTGVIRSVTGGMCSVY 1010
Query: 225 LAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEED-DVK 283
L + E+ +SI + LEP+ P N+KVKVI+GE +E TGVLLS+D +G++++ ED +K
Sbjct: 1011 LKDSEKVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIIRMDLEDQQIK 1070
Query: 284 MIDVKFLCK 292
+++++FL K
Sbjct: 1071 ILNLRFLGK 1079
>gi|74138739|dbj|BAE27184.1| unnamed protein product [Mus musculus]
Length = 1082
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 149/429 (34%), Positives = 198/429 (46%), Gaps = 145/429 (33%)
Query: 2 TGGF--MSPRISSPMHPSG-GRGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK---- 54
GGF MSPRISSPMHPS G+ G G GG G RRD ELIG+T++I+ GPYK
Sbjct: 657 VGGFTPMSPRISSPMHPSAEGQHGGFGSPGGMSRGRGRRDNELIGQTVRISQGPYKGYIG 716
Query: 55 ------------------------------VGSRTPGG---------------------- 62
V S+ PGG
Sbjct: 717 VVKDATESTARVELHSTCQTISVDRQRLTTVDSQRPGGMTSTYGRTPMYGSQTPMYGSGS 776
Query: 63 ------GATPLHDGSRTP------------------GPWDPS--STPARSIHNDAYPMDD 96
TPL DGSRTP G WDP+ +TP+R+ Y DD
Sbjct: 777 RTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDD 836
Query: 97 --------------------------SFNNSY-PHTPGT--MYGSS--------SEHTSY 119
N Y P TPGT MY + S SY
Sbjct: 837 EPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSY 896
Query: 120 SPL-------QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGTPSPL 164
P Q +PSP+GYQ +HS S + S A+PSPS S P G PSP
Sbjct: 897 QPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-GAPSPG 955
Query: 165 SYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGVCSVY 224
Y +P TPG+G++Q + +W TTDI+V++ + D + GQ GVIR + G+CSVY
Sbjct: 956 GY-----NPHTPGSGIEQN-SSDWVTTDIQVKVRDTYLDTQIVGQTGVIRSVTGGMCSVY 1009
Query: 225 LAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEED-DVK 283
L + E+ +SI + LEP+ P N+KVKVI+GE +E TGVLLS+D +G++++ ED +K
Sbjct: 1010 LKDSEKVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIIRMDLEDQQIK 1069
Query: 284 MIDVKFLCK 292
+++++FL K
Sbjct: 1070 ILNLRFLGK 1078
>gi|392344064|ref|XP_003748857.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor SPT5
[Rattus norvegicus]
Length = 1137
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 149/429 (34%), Positives = 198/429 (46%), Gaps = 145/429 (33%)
Query: 2 TGGF--MSPRISSPMHPSG-GRGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK---- 54
GGF MSPRISSPMHPS G+ G G GG G RRD ELIG+T++I+ GPYK
Sbjct: 712 VGGFTPMSPRISSPMHPSAEGQHGGFGSPGGMSRGRGRRDNELIGQTVRISQGPYKGYIG 771
Query: 55 ------------------------------VGSRTPGG---------------------- 62
V S+ PGG
Sbjct: 772 VVKDATESTARVELHSTCQTISVDRQRLTTVDSQRPGGMTSTYGRTPMYGSQTPMYGSGS 831
Query: 63 ------GATPLHDGSRTP------------------GPWDPS--STPARSIHNDAYPMDD 96
TPL DGSRTP G WDP+ +TP+R+ Y DD
Sbjct: 832 RTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDD 891
Query: 97 --------------------------SFNNSY-PHTPGT--MYGSS--------SEHTSY 119
N Y P TPGT MY + S SY
Sbjct: 892 EPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSY 951
Query: 120 SPL-------QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGTPSPL 164
P Q +PSP+GYQ +HS S + S A+PSPS S P G PSP
Sbjct: 952 QPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-GAPSPG 1010
Query: 165 SYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGVCSVY 224
Y +P TPG+G++Q + +W TTDI+V++ + D + GQ GVIR + G+CSVY
Sbjct: 1011 GY-----NPHTPGSGIEQN-SSDWVTTDIQVKVRDTYLDTQIVGQTGVIRSVTGGMCSVY 1064
Query: 225 LAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEED-DVK 283
L + E+ +SI + LEP+ P N+KVKVI+GE +E TGVLLS+D +G++++ ED +K
Sbjct: 1065 LKDSEKVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIIRMDLEDQQIK 1124
Query: 284 MIDVKFLCK 292
+++++FL K
Sbjct: 1125 ILNLRFLGK 1133
>gi|410225316|gb|JAA09877.1| suppressor of Ty 5 homolog [Pan troglodytes]
gi|410225318|gb|JAA09878.1| suppressor of Ty 5 homolog [Pan troglodytes]
Length = 1087
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 152/432 (35%), Positives = 200/432 (46%), Gaps = 148/432 (34%)
Query: 2 TGGF--MSPRISSPMHPSGG-----RGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK 54
GGF MSPRISSPMHPS G G GGG GG G RRD ELIG+T++I+ GPYK
Sbjct: 659 VGGFAPMSPRISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYK 718
Query: 55 ----------------------------------VGSRTPG------------------- 61
VGSR PG
Sbjct: 719 GYIGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMY 778
Query: 62 ---------GGATPLHDGSRTP------------------GPWDPS--STPARSIHNDAY 92
G TPL DGSRTP G WDP+ +TP+R+ Y
Sbjct: 779 GSGSRTPMYGSQTPLQDGSRTPHYGSQTPPHDGSRTPAQSGAWDPNNPNTPSRAEEEYEY 838
Query: 93 PMDD--------------------------SFNNSY-PHTPGT--MYGSS--------SE 115
DD N Y P TPGT MY + S
Sbjct: 839 AFDDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSP 898
Query: 116 HTSYSPL-------QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGT 160
SY P Q +PSP+GYQ +HS S + S A+PSPS S P G
Sbjct: 899 QGSYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-GA 957
Query: 161 PSPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGV 220
PSP Y +P TPG+G++Q + +W TTDI+V++ + D + GQ GVIR + G+
Sbjct: 958 PSPGGY-----NPHTPGSGIEQN-SSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGM 1011
Query: 221 CSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEED 280
CSVYL + E+ +SI + LEP+ P N+KVKVI+GE +E TGVLLS+D +G+V++ ++
Sbjct: 1012 CSVYLKDSEKVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDE 1071
Query: 281 DVKMIDVKFLCK 292
+K+++++FL K
Sbjct: 1072 QLKILNLRFLGK 1083
>gi|74222096|dbj|BAE26864.1| unnamed protein product [Mus musculus]
Length = 1082
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 149/429 (34%), Positives = 198/429 (46%), Gaps = 145/429 (33%)
Query: 2 TGGF--MSPRISSPMHPSG-GRGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK---- 54
GGF MSPRISSPMHPS G+ G G GG G RRD ELIG+T++I+ GPYK
Sbjct: 657 VGGFTPMSPRISSPMHPSAEGQHGGFGSPGGMSRGRGRRDNELIGQTVRISQGPYKGYIG 716
Query: 55 ------------------------------VGSRTPGG---------------------- 62
V S+ PGG
Sbjct: 717 VVKDATESTARVELHSTCQTISVDRQRLTTVDSQRPGGMTSTYGRTPMYGSQTPMYGSDS 776
Query: 63 ------GATPLHDGSRTP------------------GPWDPS--STPARSIHNDAYPMDD 96
TPL DGSRTP G WDP+ +TP+R+ Y DD
Sbjct: 777 RTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDD 836
Query: 97 --------------------------SFNNSY-PHTPGT--MYGSS--------SEHTSY 119
N Y P TPGT MY + S SY
Sbjct: 837 EPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSY 896
Query: 120 SPL-------QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGTPSPL 164
P Q +PSP+GYQ +HS S + S A+PSPS S P G PSP
Sbjct: 897 QPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-GAPSPG 955
Query: 165 SYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGVCSVY 224
Y +P TPG+G++Q + +W TTDI+V++ + D + GQ GVIR + G+CSVY
Sbjct: 956 GY-----NPHTPGSGIEQN-SSDWVTTDIQVKVRDTYLDTQIVGQTGVIRSVTGGMCSVY 1009
Query: 225 LAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEED-DVK 283
L + E+ +SI + LEP+ P N+KVKVI+GE +E TGVLLS+D +G++++ ED +K
Sbjct: 1010 LKDSEKVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIIRMDIEDQQIK 1069
Query: 284 MIDVKFLCK 292
+++++FL K
Sbjct: 1070 ILNLRFLGK 1078
>gi|149056473|gb|EDM07904.1| suppressor of Ty 5 homolog (S. cerevisiae), isoform CRA_b [Rattus
norvegicus]
Length = 943
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 149/429 (34%), Positives = 198/429 (46%), Gaps = 145/429 (33%)
Query: 2 TGGF--MSPRISSPMHPSG-GRGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK---- 54
GGF MSPRISSPMHPS G+ G G GG G RRD ELIG+T++I+ GPYK
Sbjct: 518 VGGFTPMSPRISSPMHPSAEGQHGGFGSPGGMSRGRGRRDNELIGQTVRISQGPYKGYIG 577
Query: 55 ------------------------------VGSRTPGG---------------------- 62
V S+ PGG
Sbjct: 578 VVKDATESTARVELHSTCQTISVDRQRLTTVDSQRPGGMTSTYGRTPMYGSQTPMYGSGS 637
Query: 63 ------GATPLHDGSRTP------------------GPWDPS--STPARSIHNDAYPMDD 96
TPL DGSRTP G WDP+ +TP+R+ Y DD
Sbjct: 638 RTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDD 697
Query: 97 --------------------------SFNNSY-PHTPGT--MYGSS--------SEHTSY 119
N Y P TPGT MY + S SY
Sbjct: 698 EPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSY 757
Query: 120 SPL-------QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGTPSPL 164
P Q +PSP+GYQ +HS S + S A+PSPS S P G PSP
Sbjct: 758 QPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-GAPSPG 816
Query: 165 SYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGVCSVY 224
Y +P TPG+G++Q + +W TTDI+V++ + D + GQ GVIR + G+CSVY
Sbjct: 817 GY-----NPHTPGSGIEQN-SSDWVTTDIQVKVRDTYLDTQIVGQTGVIRSVTGGMCSVY 870
Query: 225 LAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEED-DVK 283
L + E+ +SI + LEP+ P N+KVKVI+GE +E TGVLLS+D +G++++ ED +K
Sbjct: 871 LKDSEKVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIIRMDLEDQQIK 930
Query: 284 MIDVKFLCK 292
+++++FL K
Sbjct: 931 ILNLRFLGK 939
>gi|338710414|ref|XP_003362360.1| PREDICTED: transcription elongation factor SPT5 isoform 3 [Equus
caballus]
Length = 1083
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 154/432 (35%), Positives = 202/432 (46%), Gaps = 148/432 (34%)
Query: 2 TGGF--MSPRISSPMHPSGG-----RGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK 54
GGF MSPRISSPMHPS G G GGG GG G RRD ELIG+T++I+ GPYK
Sbjct: 655 VGGFAPMSPRISSPMHPSTGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYK 714
Query: 55 ----------------------------------VGSRTPGG-----GATP--------- 66
VGSR PGG G TP
Sbjct: 715 GYIGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMY 774
Query: 67 -----------------------------LHDGSRTP---GPWDPS--STPARSIHNDAY 92
LHDGSRTP G WDP+ +TP+R+ Y
Sbjct: 775 GSGSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEY 834
Query: 93 PMDD--------------------------SFNNSY-PHTPGT--MYGSS--------SE 115
DD N Y P TPGT MY + S
Sbjct: 835 AFDDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSP 894
Query: 116 HTSYSPL-------QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGT 160
SY P Q +PSP+GYQ +HS S + S A+PSPS S P G
Sbjct: 895 QGSYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-GA 953
Query: 161 PSPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGV 220
PSP Y +P TPG+G++Q + +W TTDI+V++ + D + GQ GVIR + G+
Sbjct: 954 PSPGGY-----NPHTPGSGIEQN-SSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGM 1007
Query: 221 CSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEED 280
CSVYL + E+ +SI + LEP+ P N+KVKVI+GE +E TGVLLS+D +G+V++ ++
Sbjct: 1008 CSVYLKDSEKVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDE 1067
Query: 281 DVKMIDVKFLCK 292
+K+++++FL K
Sbjct: 1068 QLKILNLRFLGK 1079
>gi|1845267|gb|AAC51102.1| SUPT5H [Homo sapiens]
Length = 1087
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 154/432 (35%), Positives = 202/432 (46%), Gaps = 148/432 (34%)
Query: 2 TGGF--MSPRISSPMHPSGG-----RGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK 54
GGF MSPRISSPMHPS G G GGG GG G RRD ELIG+T++I+ GPYK
Sbjct: 659 VGGFAPMSPRISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYK 718
Query: 55 ----------------------------------VGSRTPGG-----GATP--------- 66
VGSR PGG G TP
Sbjct: 719 GYIGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMY 778
Query: 67 -----------------------------LHDGSRTP---GPWDPS--STPARSIHNDAY 92
LHDGSRTP G WDP+ +TP+R+ Y
Sbjct: 779 GSGSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGGWDPNNPNTPSRAEEEYEY 838
Query: 93 PMDD--------------------------SFNNSY-PHTPGT--MYGSS--------SE 115
DD N Y P TPGT MY + S
Sbjct: 839 AFDDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSP 898
Query: 116 HTSYSPL-------QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGT 160
SY P Q +PSP+GYQ +HS S + S A+PSPS S P G
Sbjct: 899 QGSYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-GA 957
Query: 161 PSPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGV 220
PSP Y +P TPG+G++Q + +W TTDI+V++ + D + GQ GVIR + G+
Sbjct: 958 PSPGGY-----NPHTPGSGIEQN-SSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGM 1011
Query: 221 CSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEED 280
CSVYL + E+ +SI + LEP+ P N+KVKVI+GE +E TGVLLS+D +G+V++ ++
Sbjct: 1012 CSVYLKDSEKVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDE 1071
Query: 281 DVKMIDVKFLCK 292
+K+++++FL K
Sbjct: 1072 QLKILNLRFLGK 1083
>gi|37589463|gb|AAH59849.1| Supt5h protein [Mus musculus]
Length = 888
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 149/429 (34%), Positives = 198/429 (46%), Gaps = 145/429 (33%)
Query: 2 TGGF--MSPRISSPMHPSG-GRGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK---- 54
GGF MSPRISSPMHPS G+ G G GG G RRD ELIG+T++I+ GPYK
Sbjct: 463 VGGFTPMSPRISSPMHPSAEGQHGGFGSPGGMSRGRGRRDNELIGQTVRISQGPYKGYIG 522
Query: 55 ------------------------------VGSRTPGG---------------------- 62
V S+ PGG
Sbjct: 523 VVKDATESTARVELHSTCQTISVDRQRLTTVDSQRPGGMTSTYGRTPMYGSQTPMYGSGS 582
Query: 63 ------GATPLHDGSRTP------------------GPWDPS--STPARSIHNDAYPMDD 96
TPL DGSRTP G WDP+ +TP+R+ Y DD
Sbjct: 583 RTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDD 642
Query: 97 --------------------------SFNNSY-PHTPGT--MYGSS--------SEHTSY 119
N Y P TPGT MY + S SY
Sbjct: 643 EPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSY 702
Query: 120 SPL-------QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGTPSPL 164
P Q +PSP+GYQ +HS S + S A+PSPS S P G PSP
Sbjct: 703 QPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-GAPSPG 761
Query: 165 SYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGVCSVY 224
Y +P TPG+G++Q + +W TTDI+V++ + D + GQ GVIR + G+CSVY
Sbjct: 762 GY-----NPHTPGSGIEQN-SSDWVTTDIQVKVRDTYLDTQIVGQTGVIRSVTGGMCSVY 815
Query: 225 LAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEED-DVK 283
L + E+ +SI + LEP+ P N+KVKVI+GE +E TGVLLS+D +G++++ ED +K
Sbjct: 816 LKDSEKVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIIRMDLEDQQIK 875
Query: 284 MIDVKFLCK 292
+++++FL K
Sbjct: 876 ILNLRFLGK 884
>gi|194215430|ref|XP_001915972.1| PREDICTED: transcription elongation factor SPT5 isoform 1 [Equus
caballus]
gi|338710411|ref|XP_003362359.1| PREDICTED: transcription elongation factor SPT5 isoform 2 [Equus
caballus]
Length = 1087
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 154/432 (35%), Positives = 202/432 (46%), Gaps = 148/432 (34%)
Query: 2 TGGF--MSPRISSPMHPSGG-----RGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK 54
GGF MSPRISSPMHPS G G GGG GG G RRD ELIG+T++I+ GPYK
Sbjct: 659 VGGFAPMSPRISSPMHPSTGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYK 718
Query: 55 ----------------------------------VGSRTPGG-----GATP--------- 66
VGSR PGG G TP
Sbjct: 719 GYIGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMY 778
Query: 67 -----------------------------LHDGSRTP---GPWDPS--STPARSIHNDAY 92
LHDGSRTP G WDP+ +TP+R+ Y
Sbjct: 779 GSGSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEY 838
Query: 93 PMDD--------------------------SFNNSY-PHTPGT--MYGSS--------SE 115
DD N Y P TPGT MY + S
Sbjct: 839 AFDDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSP 898
Query: 116 HTSYSPL-------QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGT 160
SY P Q +PSP+GYQ +HS S + S A+PSPS S P G
Sbjct: 899 QGSYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-GA 957
Query: 161 PSPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGV 220
PSP Y +P TPG+G++Q + +W TTDI+V++ + D + GQ GVIR + G+
Sbjct: 958 PSPGGY-----NPHTPGSGIEQN-SSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGM 1011
Query: 221 CSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEED 280
CSVYL + E+ +SI + LEP+ P N+KVKVI+GE +E TGVLLS+D +G+V++ ++
Sbjct: 1012 CSVYLKDSEKVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDE 1071
Query: 281 DVKMIDVKFLCK 292
+K+++++FL K
Sbjct: 1072 QLKILNLRFLGK 1083
>gi|148692198|gb|EDL24145.1| suppressor of Ty 5 homolog (S. cerevisiae) [Mus musculus]
Length = 1080
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 149/429 (34%), Positives = 198/429 (46%), Gaps = 145/429 (33%)
Query: 2 TGGF--MSPRISSPMHPSG-GRGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK---- 54
GGF MSPRISSPMHPS G+ G G GG G RRD ELIG+T++I+ GPYK
Sbjct: 655 VGGFTPMSPRISSPMHPSAEGQHGGFGSPGGMSRGRGRRDNELIGQTVRISQGPYKGYIG 714
Query: 55 ------------------------------VGSRTPGG---------------------- 62
V S+ PGG
Sbjct: 715 VVKDATESTARVELHSTCQTISVDRQRLTTVDSQRPGGMTSTYGRTPMYGSQTPMYGSGS 774
Query: 63 ------GATPLHDGSRTP------------------GPWDPS--STPARSIHNDAYPMDD 96
TPL DGSRTP G WDP+ +TP+R+ Y DD
Sbjct: 775 RTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDD 834
Query: 97 --------------------------SFNNSY-PHTPGT--MYGSS--------SEHTSY 119
N Y P TPGT MY + S SY
Sbjct: 835 EPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSY 894
Query: 120 SPL-------QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGTPSPL 164
P Q +PSP+GYQ +HS S + S A+PSPS S P G PSP
Sbjct: 895 QPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-GAPSPG 953
Query: 165 SYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGVCSVY 224
Y +P TPG+G++Q + +W TTDI+V++ + D + GQ GVIR + G+CSVY
Sbjct: 954 GY-----NPHTPGSGIEQN-SSDWVTTDIQVKVRDTYLDTQIVGQTGVIRSVTGGMCSVY 1007
Query: 225 LAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEED-DVK 283
L + E+ +SI + LEP+ P N+KVKVI+GE +E TGVLLS+D +G++++ ED +K
Sbjct: 1008 LKDSEKVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIIRMDLEDQQIK 1067
Query: 284 MIDVKFLCK 292
+++++FL K
Sbjct: 1068 ILNLRFLGK 1076
>gi|395859712|ref|XP_003802176.1| PREDICTED: transcription elongation factor SPT5 [Otolemur garnettii]
Length = 1086
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 154/433 (35%), Positives = 202/433 (46%), Gaps = 148/433 (34%)
Query: 1 MTGGF--MSPRISSPMHPSGG-----RGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPY 53
T GF MSPRISSPMHPS G G GGG GG G RRD ELIG+T++I+ GPY
Sbjct: 657 FTDGFSPMSPRISSPMHPSLGGQHGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPY 716
Query: 54 K----------------------------------VGSRTPGG-----GATP-------- 66
K VGSR PGG G TP
Sbjct: 717 KGYIGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPM 776
Query: 67 ------------------------------LHDGSRTP---GPWDPS--STPARSIHNDA 91
LHDGSRTP G WDP+ +TP+R+
Sbjct: 777 YGSGSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYE 836
Query: 92 YPMDD--------------------------SFNNSY-PHTPGT--MYGSS--------S 114
Y DD N Y P TPGT MY + S
Sbjct: 837 YAFDDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPS 896
Query: 115 EHTSYSPL-------QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYG 159
SY P Q +PSP+GYQ +HS S + S A+PSPS S P G
Sbjct: 897 PQGSYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-G 955
Query: 160 TPSPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSG 219
PSP Y +P TPG+G++Q + +W TTDI+V++ + D + GQ GVIR + G
Sbjct: 956 APSPGGY-----NPHTPGSGIEQN-SSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGG 1009
Query: 220 VCSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEE 279
+CSVYL + E+ +SI + LEP+ P N+KVKVI+GE +E TGVLLS+D +G+V++ +
Sbjct: 1010 MCSVYLKDSEKVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLD 1069
Query: 280 DDVKMIDVKFLCK 292
+ +K+++++FL K
Sbjct: 1070 EQLKILNLRFLGK 1082
>gi|351706478|gb|EHB09397.1| Transcription elongation factor SPT5 [Heterocephalus glaber]
Length = 1094
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 150/435 (34%), Positives = 200/435 (45%), Gaps = 151/435 (34%)
Query: 2 TGGF--MSPRISSPMHPSGGRGGRGGGRGGHHGGNVRR-----DRELIGKTIKITGGPYK 54
GGF MSPRISSPMHPSGG G G G G + R D ELIG+T++I+ GPYK
Sbjct: 663 VGGFAPMSPRISSPMHPSGGGQHGGFGSPGGSGSGMSRGRGRRDNELIGQTVRISQGPYK 722
Query: 55 ----------------------------------VGSRTPGGGAT--------------- 65
VGSR PGG A+
Sbjct: 723 GYIGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMASNYGRTPMYGSQTPMY 782
Query: 66 -------------------------------PLHDGSRTP---GPWDPS--STPARSIHN 89
PLHDGSRTP G WDP+ +TP+R+
Sbjct: 783 GSGSRTPMYGSQTPLQDADKLTSPLQAAVPTPLHDGSRTPAQSGAWDPNNPNTPSRAEEE 842
Query: 90 DAYPMDD--------------------------SFNNSY-PHTPGT--MYGSS------- 113
Y DD N Y P TPGT MY +
Sbjct: 843 YEYAFDDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAA 902
Query: 114 -SEHTSYSPL-------QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAP 157
S SY P Q +PSP+GYQ +HS S + S A+PSPS S P
Sbjct: 903 PSPQGSYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP 962
Query: 158 YGTPSPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLG 217
G PSP Y +P TPG+G++Q + +W TTDI+V++ + D + GQ GVIR +
Sbjct: 963 -GAPSPGGY-----NPHTPGSGIEQN-SSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVT 1015
Query: 218 SGVCSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLT 277
G+CSVYL + E+ +SI + LEP+ P N+KVKVI+GE +E TGVLLS+D +G+V++
Sbjct: 1016 GGMCSVYLKDSEKVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMD 1075
Query: 278 EEDDVKMIDVKFLCK 292
++ +K+++++FL K
Sbjct: 1076 LDEQLKILNLRFLGK 1090
>gi|405964095|gb|EKC29617.1| Transcription elongation factor SPT5 [Crassostrea gigas]
Length = 1046
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 113/266 (42%), Positives = 152/266 (57%), Gaps = 32/266 (12%)
Query: 52 PYKVGSRTPG-GGATPLHD-GSRTPG--PWDPSS--TPARS----IHNDAYPMDDSFNNS 101
P GSRTP G TPLH+ GSRTPG WDP++ TP R+ H D P + +
Sbjct: 785 PLHDGSRTPNYGSMTPLHEPGSRTPGQSAWDPTNPNTPTRNNDFDYHFDDNPSPGDYGGA 844
Query: 102 YPH---------TPGTM--YGSSSEHTSYSPL-QASPSPSGYQSHS-GVSSGSSSYLGAT 148
P+ TP M + + TSYSP Q SPSP Y + S G S S LG
Sbjct: 845 TPNPGTPGYTADTPSPMGPFTPQTPGTSYSPYAQPSPSPGSYSAPSPGFGGASPSPLGYQ 904
Query: 149 PSPSSEAAPYGTPSPLSYSSRQ--ASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEF 206
PSPS+ TPSPL YS +PFTPGTG+DQ +WHTT+IEV+I E D +
Sbjct: 905 PSPSNT-----TPSPLGYSPMTPGGAPFTPGTGMDQ-SMADWHTTEIEVKIKETHDDHKL 958
Query: 207 RGQIGVIRHLGSGVCSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLS 266
Q G+IR + G+CS+++ EE++ ++I LEPV P+ D+ KVI+GE +E G LLS
Sbjct: 959 IHQTGIIRSVTGGMCSLFIPEEDKVVNIACEHLEPVSPEKGDRAKVILGEERELMGTLLS 1018
Query: 267 VDNGEGVVKLTEEDDVKMIDVKFLCK 292
+D EGV+K T+ ++M+ + +LCK
Sbjct: 1019 IDGTEGVIK-TDSGHIRMLPINYLCK 1043
>gi|334328572|ref|XP_001363220.2| PREDICTED: transcription elongation factor SPT5 [Monodelphis
domestica]
Length = 993
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 148/428 (34%), Positives = 198/428 (46%), Gaps = 144/428 (33%)
Query: 2 TGGF--MSPRISSPMHPSGG---RGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK-- 54
GGF MSPRISSPMHPS G G G GG G RRD +LIG+T++I+ GPYK
Sbjct: 569 VGGFAPMSPRISSPMHPSAGGQRGGFGSAGGGGMSRGRGRRDNDLIGQTVRISQGPYKGY 628
Query: 55 --------------------------------VGSRTPGG-------------------- 62
VGSR PGG
Sbjct: 629 IGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSAYGRTPMYGSQTPMYVQ 688
Query: 63 --------GATPLHDGSRTP------------------GPWDPS--STPARSIHNDAYPM 94
TPLHDGSRTP G WDP+ +TP+R+ Y
Sbjct: 689 GSRTPMYSSQTPLHDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAF 748
Query: 95 DD--------------------------SFNNSY-PHTPGT--MYGSS--------SEHT 117
DD N Y P TPGT MY + S
Sbjct: 749 DDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNAQYNPQTPGTPAMYNTDQFSPYAAPSPQG 808
Query: 118 SYSPL-----QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGTPSPL 164
SY P Q +PSP+GYQ +HS S + S A+PSPS S P G PSP
Sbjct: 809 SYQPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-GAPSPG 867
Query: 165 SYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGVCSVY 224
Y +P TPG+G++Q + +W TTDI+V++ + D + GQ GVIR + G+CSVY
Sbjct: 868 GY-----NPHTPGSGIEQN-SSDWVTTDIQVKVRDTYLDSQVVGQTGVIRSVTGGMCSVY 921
Query: 225 LAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEEDDVKM 284
L + E+ +SI + LEP+ P ++KVKVI+GE +E TG LLS+D +G+V++ ++ +K+
Sbjct: 922 LKDSEKVVSISSEHLEPITPTKSNKVKVILGEDREATGDLLSIDGEDGIVRMDLDEQLKI 981
Query: 285 IDVKFLCK 292
++++FL K
Sbjct: 982 LNLRFLGK 989
>gi|348563026|ref|XP_003467309.1| PREDICTED: transcription elongation factor SPT5-like isoform 1 [Cavia
porcellus]
Length = 1087
Score = 160 bits (404), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 151/432 (34%), Positives = 201/432 (46%), Gaps = 148/432 (34%)
Query: 2 TGGF--MSPRISSPMHPSGGRGGRGGGRGGHHGGNVRR-----DRELIGKTIKITGGPYK 54
GGF MSPRISSPMHPSGG G G G GG + R D ELIG+T++I+ GPYK
Sbjct: 659 VGGFAPMSPRISSPMHPSGGGQHGGFGSPGGSGGGMSRGRGRRDNELIGQTVRISQGPYK 718
Query: 55 ----------------------------------VGSRTPGG-----GATP--------- 66
VGSR PGG G TP
Sbjct: 719 GYIGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSNYGRTPMYGSQTPMY 778
Query: 67 -----------------------------LHDGSRTP---GPWDPS--STPARSIHNDAY 92
LHDGSRTP G WDP+ +TP+R+ Y
Sbjct: 779 GSGSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEY 838
Query: 93 PMDD--------------------------SFNNSY-PHTPGT--MYGSS--------SE 115
DD N Y P TPGT MY + S
Sbjct: 839 AFDDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSP 898
Query: 116 HTSYSPL-------QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGT 160
SY P Q +PSP+GYQ +HS S + S A+PSPS S P G
Sbjct: 899 QGSYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-GA 957
Query: 161 PSPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGV 220
PSP Y +P TPG+G++Q + +W TTDI+V++ + D + GQ G+IR + G+
Sbjct: 958 PSPGGY-----NPHTPGSGIEQN-SSDWVTTDIQVKVRDTYLDTQVVGQTGIIRSVTGGM 1011
Query: 221 CSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEED 280
CSVYL + E+ +SI + LEP+ P N+KVKVI+GE +E TGVLLS+D +G+V++ ++
Sbjct: 1012 CSVYLKDSEKVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDE 1071
Query: 281 DVKMIDVKFLCK 292
+K+++++FL K
Sbjct: 1072 QLKILNLRFLGK 1083
>gi|348563028|ref|XP_003467310.1| PREDICTED: transcription elongation factor SPT5-like isoform 2 [Cavia
porcellus]
Length = 1083
Score = 160 bits (404), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 151/432 (34%), Positives = 201/432 (46%), Gaps = 148/432 (34%)
Query: 2 TGGF--MSPRISSPMHPSGGRGGRGGGRGGHHGGNVRR-----DRELIGKTIKITGGPYK 54
GGF MSPRISSPMHPSGG G G G GG + R D ELIG+T++I+ GPYK
Sbjct: 655 VGGFAPMSPRISSPMHPSGGGQHGGFGSPGGSGGGMSRGRGRRDNELIGQTVRISQGPYK 714
Query: 55 ----------------------------------VGSRTPGG-----GATP--------- 66
VGSR PGG G TP
Sbjct: 715 GYIGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSNYGRTPMYGSQTPMY 774
Query: 67 -----------------------------LHDGSRTP---GPWDPS--STPARSIHNDAY 92
LHDGSRTP G WDP+ +TP+R+ Y
Sbjct: 775 GSGSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEY 834
Query: 93 PMDD--------------------------SFNNSY-PHTPGT--MYGSS--------SE 115
DD N Y P TPGT MY + S
Sbjct: 835 AFDDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSP 894
Query: 116 HTSYSPL-------QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGT 160
SY P Q +PSP+GYQ +HS S + S A+PSPS S P G
Sbjct: 895 QGSYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-GA 953
Query: 161 PSPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGV 220
PSP Y +P TPG+G++Q + +W TTDI+V++ + D + GQ G+IR + G+
Sbjct: 954 PSPGGY-----NPHTPGSGIEQN-SSDWVTTDIQVKVRDTYLDTQVVGQTGIIRSVTGGM 1007
Query: 221 CSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEED 280
CSVYL + E+ +SI + LEP+ P N+KVKVI+GE +E TGVLLS+D +G+V++ ++
Sbjct: 1008 CSVYLKDSEKVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDE 1067
Query: 281 DVKMIDVKFLCK 292
+K+++++FL K
Sbjct: 1068 QLKILNLRFLGK 1079
>gi|395526018|ref|XP_003765172.1| PREDICTED: transcription elongation factor SPT5 [Sarcophilus
harrisii]
Length = 982
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 149/427 (34%), Positives = 199/427 (46%), Gaps = 143/427 (33%)
Query: 2 TGGF--MSPRISSPMHPSGG---RGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK-- 54
GGF MSPRISSPMHPS G G G GG G RRD +LIG+T++I+ GPYK
Sbjct: 559 VGGFAPMSPRISSPMHPSAGGQRGGFGSAGGGGMSRGRGRRDNDLIGQTVRISQGPYKGY 618
Query: 55 --------------------------------VGSRTPGG-----GATP----------- 66
VGSR PGG G TP
Sbjct: 619 IGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSAYGRTPMYGSQTPMYVQ 678
Query: 67 --------------------------LHDGSRTP---GPWDPS--STPARSIHNDAYPMD 95
LHDGSRTP G WDP+ +TP+R+ Y D
Sbjct: 679 GSRTPMYSSQTPLHDGESPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFD 738
Query: 96 D--------------------------SFNNSY-PHTPGT--MYGSS--------SEHTS 118
D N Y P TPGT MY + S S
Sbjct: 739 DEPTPSPQAYGGTPNPQTPGYPDPSSPQVNAQYNPQTPGTPAMYNTDQFSPYAAPSPQGS 798
Query: 119 YSPL-----QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGTPSPLS 165
Y P Q +PSP+GYQ +HS S + S A+PSPS S P G PSP
Sbjct: 799 YQPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-GAPSPGG 857
Query: 166 YSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGVCSVYL 225
Y +P TPG+G++Q + +W TTDI+V++ + D + GQ GVIR + G+CSVYL
Sbjct: 858 Y-----NPHTPGSGIEQ-NSSDWVTTDIQVKVRDTYLDSQVVGQTGVIRSVTGGMCSVYL 911
Query: 226 AEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEEDDVKMI 285
+ E+ +SI + LEP+ P ++KVKVI+GE +E TG LLS+D +G+V++ ++ +K++
Sbjct: 912 KDSEKVVSISSEHLEPITPTKSNKVKVILGEDREATGDLLSIDGEDGIVRMDLDEQLKIL 971
Query: 286 DVKFLCK 292
+++FL K
Sbjct: 972 NLRFLGK 978
>gi|71897283|ref|NP_001026555.1| transcription elongation factor SPT5 [Gallus gallus]
gi|82080942|sp|Q5ZI08.1|SPT5H_CHICK RecName: Full=Transcription elongation factor SPT5; AltName: Full=DRB
sensitivity-inducing factor large subunit; Short=DSIF
large subunit
gi|53136612|emb|CAG32635.1| hypothetical protein RCJMB04_31j17 [Gallus gallus]
Length = 1079
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 145/421 (34%), Positives = 195/421 (46%), Gaps = 141/421 (33%)
Query: 6 MSPRISSPMHPSGGRGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK----------- 54
MSPRISSPMHPSG G G GG G RRD +LIG+T++I+ GPYK
Sbjct: 662 MSPRISSPMHPSGAGQRGGFGGGGMSRGRGRRDNDLIGQTVRISQGPYKGYIGVVKDATE 721
Query: 55 -----------------------VGSRTPG----------------------------GG 63
VGSR PG G
Sbjct: 722 STARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGSGSRTPMYGS 781
Query: 64 ATPLHDGSRTP------------------GPWDPS--STPARSIHNDAYPMDD------- 96
TPLHDGSRTP G WDP+ +TP+R+ + Y DD
Sbjct: 782 QTPLHDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRADEDFEYGFDDEPTPSPQ 841
Query: 97 -------------------SFNNSY-PHTPGT--MYGSS--------SEHTSYSPL---- 122
Y P TPGT MY + S SY P
Sbjct: 842 GYGGTPNPQTPGYPDPSSPQVTQPYNPQTPGTPAMYNTDQFSPYAVPSPQGSYQPSPSPQ 901
Query: 123 ---QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGTPSPLSYSSRQA 171
Q +PSP GYQ +HS S + S A+PSPS S P G PSP Y
Sbjct: 902 SYHQVAPSPVGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-GAPSPGGY----- 955
Query: 172 SPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGVCSVYLAEEERT 231
+P TPG+G++Q + +W TTDI+V++ + D + GQ GVIR + G+CSVYL + E+
Sbjct: 956 NPHTPGSGIEQ-SSSDWVTTDIQVKVRDTYLDSQAVGQTGVIRSVTGGMCSVYLKDSEKV 1014
Query: 232 LSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEEDDVKMIDVKFLC 291
+SI + LEPV P ++KVKVI+GE +E TG+LLS+D +G+V++ ++ +K+++++FL
Sbjct: 1015 VSISSEHLEPVTPTKSNKVKVILGEDREATGILLSIDGEDGIVRMDLDEQLKILNLRFLG 1074
Query: 292 K 292
K
Sbjct: 1075 K 1075
>gi|444732088|gb|ELW72407.1| Transcription elongation factor SPT5 [Tupaia chinensis]
Length = 1243
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 117/299 (39%), Positives = 162/299 (54%), Gaps = 65/299 (21%)
Query: 52 PYKVGSRTPG-GGATPLHDGSRTP---GPWDPSS--TPARSIHNDAYPMDD--------- 96
P + GSRTP G TPLHDGSRTP G WDP++ TP+R+ Y DD
Sbjct: 948 PLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSPQAY 1007
Query: 97 -----------------SFNNSY-PHTPGT--MYGSS--------SEHTSYSPL------ 122
N Y P TPGT MY + S SY P
Sbjct: 1008 GGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSPQSY 1067
Query: 123 -QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGTPSPLSYSSRQASP 173
Q +PSP+GYQ +HS S + S A+PSPS S P G PSP Y+ P
Sbjct: 1068 HQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-GAPSPGGYN-----P 1121
Query: 174 FTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGVCSVYLAEEERTLS 233
TPG+G++Q + +W TTDI+V++ + D + GQ GVIR + G+CSVYL + E+ +S
Sbjct: 1122 HTPGSGIEQ-NSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGMCSVYLKDSEKVVS 1180
Query: 234 IEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEEDDVKMIDVKFLCK 292
I + LEP+ P N+KVKVI+GE +E TGVLLS+D +G+V++ ++ +K+++++FL K
Sbjct: 1181 ISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRFLGK 1239
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 92/219 (42%), Gaps = 40/219 (18%)
Query: 2 TGGF--MSPRISSPMHPSGG----RGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK- 54
GGF MSPRISSPMHPS G G GG GG G RRD ELIG+T++I+ GPYK
Sbjct: 809 VGGFAPMSPRISSPMHPSAGGQRGGFGSPGGGGGMSRGRGRRDNELIGQTVRISQGPYKG 868
Query: 55 ----VGSRTPGGGATPLHDGSRTPG-PWDPSSTPARSIHNDAYPMDDSFNNSYPHTPGT- 108
V T LH +T +T ++Y TP
Sbjct: 869 YIGVVKDATESTARVELHSTCQTISVDRQRLTTVYGRGRGRGSRRPGGMTSTYGRTPMYG 928
Query: 109 ----MYGSSSE---HTSYSPLQASPSPSGYQSHSGVSSGSS--SYLGA-------TPSPS 152
MYGS S + S +PLQ Y S + + GS + GA TPS +
Sbjct: 929 SQTPMYGSGSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRA 988
Query: 153 SEAAPYG-----TPSPLSYSSRQASPFTPGTGLDQYPTP 186
E Y TPSP +Y +P TPG YP P
Sbjct: 989 EEEYEYAFDDEPTPSPQAYGG-TPNPQTPG-----YPDP 1021
>gi|432090699|gb|ELK24039.1| Transcription elongation factor SPT5 [Myotis davidii]
Length = 1215
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 152/431 (35%), Positives = 199/431 (46%), Gaps = 148/431 (34%)
Query: 3 GGF--MSPRISSPMHPSGG-----RGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK- 54
GGF MSPRISSPMHPS G G GG GG G RRD ELIG+T++I+ GPYK
Sbjct: 788 GGFAPMSPRISSPMHPSAGGQRGGFGSPGGSSGGMSRGRGRRDNELIGQTVRISQGPYKG 847
Query: 55 ---------------------------------VGSRTPGG-----GATP---------- 66
VGSR PGG G TP
Sbjct: 848 YIGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMNSTYGRTPMYGSQTPMYG 907
Query: 67 ----------------------------LHDGSRTP---GPWDPS--STPARSIHNDAYP 93
LHDGSRTP G WDP+ +TP+R+ Y
Sbjct: 908 SGSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYA 967
Query: 94 MDD--------------------------SFNNSY-PHTPGT--MYGSS--------SEH 116
DD N Y P TPGT MY + S
Sbjct: 968 FDDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQ 1027
Query: 117 TSYSPL-------QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGTP 161
SY P Q +PSP+GYQ +HS S + S A+PSPS S P G P
Sbjct: 1028 GSYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-GAP 1086
Query: 162 SPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGVC 221
SP Y +P TPG+G++Q + +W TTDI+V++ + D + GQ GVIR + G+C
Sbjct: 1087 SPGGY-----NPHTPGSGIEQ-NSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVMGGMC 1140
Query: 222 SVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEEDD 281
SVYL + E+ +SI + LEP+ P N+KVKVI+GE +E TGVLLS++ +G+V + ++
Sbjct: 1141 SVYLKDSEKVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSINGEDGIVHMDLDEQ 1200
Query: 282 VKMIDVKFLCK 292
K+++++FL K
Sbjct: 1201 FKILNLRFLGK 1211
>gi|390478988|ref|XP_002762163.2| PREDICTED: transcription elongation factor SPT5 [Callithrix jacchus]
Length = 1074
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 142/416 (34%), Positives = 193/416 (46%), Gaps = 132/416 (31%)
Query: 2 TGGF--MSPRISSPMHPSGG-----RGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK 54
GGF MSPRISSPMHPS G G GG G G RRD ELIG+T++I+ GPYK
Sbjct: 662 VGGFAPMSPRISSPMHPSAGGQRGGFGSPGGSSGSMSRGRGRRDNELIGQTVRISQGPYK 721
Query: 55 ----------------------------------VGSRTPGG-----GATP--------- 66
VGSR PGG G TP
Sbjct: 722 GYIGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMY 781
Query: 67 -----------------------------LHDGSRTP---GPWDPS--STPARSIHNDAY 92
LHDGSRTP G WDP+ +TP+R+ Y
Sbjct: 782 GSGSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEY 841
Query: 93 PMDD--------------------------SFNNSY-PHTPGT--MYGSSSEHTSYSPLQ 123
DD N Y P TPGT MY ++ + + YS Q
Sbjct: 842 AFDDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMY-NTDQFSPYSYRQ 900
Query: 124 ASPSPSGY--QSHSGVSSGSSSYLGATPSPSSEAAPY-----GTPSPLSYSSRQASPFTP 176
+ PS Q G ++ +S + SPS Y G PSP Y +P TP
Sbjct: 901 VASKPSMLPEQPTPGPATPYTSDMAYQASPSPSPVGYSPMTPGAPSPGGY-----NPHTP 955
Query: 177 GTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGVCSVYLAEEERTLSIEA 236
G+G++Q + +W TTDI+V++ + D + GQ GVIR + G+CSVYL + E+ +SI +
Sbjct: 956 GSGIEQN-SSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGMCSVYLKDSEKVVSISS 1014
Query: 237 HELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEEDDVKMIDVKFLCK 292
LEP+ P N+KVKVI+GE +E TGVLLS+D +G+V++ ++ +K+++++FL K
Sbjct: 1015 EHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRFLGK 1070
>gi|344236946|gb|EGV93049.1| Transcription elongation factor SPT5 [Cricetulus griseus]
Length = 944
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 150/430 (34%), Positives = 198/430 (46%), Gaps = 146/430 (33%)
Query: 2 TGGF--MSPRISSPMHPSG--GRGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK--- 54
GGF MSPRISSPMHPSG GG G GG G RRD ELIG+T++I+ GPYK
Sbjct: 518 VGGFTPMSPRISSPMHPSGEGQHGGFGSPGGGMSRGRGRRDNELIGQTVRISQGPYKGYI 577
Query: 55 -------------------------------VGSRTPGG--------------------- 62
V S+ PGG
Sbjct: 578 GVVKDATESTARVELHSTCQTISVDRQRLTTVDSQRPGGMTSTYGRTPMYGSQTPMYGSG 637
Query: 63 -------GATPLHDGSRTP------------------GPWDPS--STPARSIHNDAYPMD 95
TPL DGSRTP G WDP+ +TP+R+ Y D
Sbjct: 638 SRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFD 697
Query: 96 D--------------------------SFNNSY-PHTPGT--MYGSS--------SEHTS 118
D N Y P TPGT MY + S S
Sbjct: 698 DEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGS 757
Query: 119 YSPL-------QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGTPSP 163
Y P Q +PSP+GYQ +HS S + S A+PSPS S P G PSP
Sbjct: 758 YQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-GAPSP 816
Query: 164 LSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGVCSV 223
Y +P TPG+G++Q + +W TTDI+V++ + D + GQ GVIR + G+CSV
Sbjct: 817 GGY-----NPHTPGSGIEQ-SSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGMCSV 870
Query: 224 YLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEED-DV 282
YL + E+ +SI + LEP+ P N+KVKVI+GE +E TGVLLS+D +G++++ ED +
Sbjct: 871 YLKDSEKVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIIRMDLEDQQI 930
Query: 283 KMIDVKFLCK 292
K+++++FL K
Sbjct: 931 KILNLRFLGK 940
>gi|354483380|ref|XP_003503872.1| PREDICTED: transcription elongation factor SPT5 isoform 1
[Cricetulus griseus]
gi|354483382|ref|XP_003503873.1| PREDICTED: transcription elongation factor SPT5 isoform 2
[Cricetulus griseus]
Length = 889
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 150/430 (34%), Positives = 198/430 (46%), Gaps = 146/430 (33%)
Query: 2 TGGF--MSPRISSPMHPSG--GRGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK--- 54
GGF MSPRISSPMHPSG GG G GG G RRD ELIG+T++I+ GPYK
Sbjct: 463 VGGFTPMSPRISSPMHPSGEGQHGGFGSPGGGMSRGRGRRDNELIGQTVRISQGPYKGYI 522
Query: 55 -------------------------------VGSRTPGG--------------------- 62
V S+ PGG
Sbjct: 523 GVVKDATESTARVELHSTCQTISVDRQRLTTVDSQRPGGMTSTYGRTPMYGSQTPMYGSG 582
Query: 63 -------GATPLHDGSRTP------------------GPWDPS--STPARSIHNDAYPMD 95
TPL DGSRTP G WDP+ +TP+R+ Y D
Sbjct: 583 SRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFD 642
Query: 96 D--------------------------SFNNSY-PHTPGT--MYGSS--------SEHTS 118
D N Y P TPGT MY + S S
Sbjct: 643 DEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGS 702
Query: 119 YSPL-------QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGTPSP 163
Y P Q +PSP+GYQ +HS S + S A+PSPS S P G PSP
Sbjct: 703 YQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-GAPSP 761
Query: 164 LSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGVCSV 223
Y +P TPG+G++Q + +W TTDI+V++ + D + GQ GVIR + G+CSV
Sbjct: 762 GGY-----NPHTPGSGIEQ-SSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGMCSV 815
Query: 224 YLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEED-DV 282
YL + E+ +SI + LEP+ P N+KVKVI+GE +E TGVLLS+D +G++++ ED +
Sbjct: 816 YLKDSEKVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIIRMDLEDQQI 875
Query: 283 KMIDVKFLCK 292
K+++++FL K
Sbjct: 876 KILNLRFLGK 885
>gi|194332615|ref|NP_001123796.1| suppressor of Ty 5 homolog [Xenopus (Silurana) tropicalis]
gi|189442281|gb|AAI67588.1| supt5h protein [Xenopus (Silurana) tropicalis]
Length = 1078
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 142/433 (32%), Positives = 195/433 (45%), Gaps = 149/433 (34%)
Query: 3 GGF--MSPRISSPMHPSGGRGGRGGGRGGHHGGNVRR----DRELIGKTIKITGGPYK-- 54
GGF MSPRISSPMHPSG G GG GG R D +LIG+T++I+ GPYK
Sbjct: 653 GGFAPMSPRISSPMHPSGSGPRGGMAGGGGGGGAGRGRGRRDNDLIGQTVRISQGPYKGY 712
Query: 55 --------------------------------VGSRTPGG-------------------- 62
VG+R GG
Sbjct: 713 IGVVKDATESTARVELHSTCQTISVDRQRLTTVGARRSGGTTSTHVRTPIYGSQTPMYGT 772
Query: 63 --------GATPLHDGSRTP------------------GPWDPS--STPARSIHNDAYPM 94
TPLHDGSRTP G WDP+ +TP+R+ Y
Sbjct: 773 GSRTPMYGSQTPLHDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRADEEYDYRY 832
Query: 95 DD--------------------------SFNNSY-PHTPGT--MYGSS--------SEHT 117
DD N Y P TPGT MY + S
Sbjct: 833 DDEPSPSPQGYGGTPNPQTPGYPDVPSPQVNAPYHPQTPGTPAMYNTDQFSPYAAPSPQG 892
Query: 118 SYSPL-------QASPSPSGYQSHSGVSSGSSSYLGATPSPSS-EAAPYGTPSPLSYSSR 169
SY P Q +PSP GYQ ++ S + TPSP + +A+P +PSP+ YS
Sbjct: 893 SYQPSPSPQSYHQVAPSPVGYQ-----NTHSPASYHPTPSPMAYQASP--SPSPMGYSPM 945
Query: 170 Q--------ASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGVC 221
+P TPG+ ++Q + +W TTDI+V++ + +D + GQ G+IR + G+C
Sbjct: 946 TPGAPSPGGYNPHTPGSSIEQI-SSDWVTTDIQVKVRDTFQDSQVIGQTGIIRSVTGGLC 1004
Query: 222 SVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEEDD 281
SV L + E+ +SI LEPV P N +VKVI+GE +E TGVLLS+DN +G+V++ +D
Sbjct: 1005 SVLLQDSEKVISISGDHLEPVTPTKNSRVKVILGEDREATGVLLSIDNEDGIVRMDLDDQ 1064
Query: 282 VKMIDVKFLCKYK 294
+K++++ FL K +
Sbjct: 1065 LKILNLHFLGKLE 1077
>gi|427788525|gb|JAA59714.1| Putative rna polymerase ii transcription elongation factor
dsif/supt5h/spt5 [Rhipicephalus pulchellus]
Length = 1087
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 119/274 (43%), Positives = 153/274 (55%), Gaps = 51/274 (18%)
Query: 53 YKVGSRTP--GGGATPLHDGSRTP--GPWDP--SSTPARSIHNDAYPMDD-SFNNSY--- 102
Y+ GSRTP GGG TPLHDGSRTP G WDP S+TPAR+ +D Y +D+ S + SY
Sbjct: 827 YEAGSRTPHFGGGQTPLHDGSRTPVHGAWDPTASNTPARTELDD-YTLDEGSPSPSYQPA 885
Query: 103 ------------PHTPGT--MYGSSSEHTSYSP----LQASPSPSGYQSHSGVSSGSSSY 144
P+TP T MYGS SYSP Q SPSP+GY + + ++
Sbjct: 886 TPGYQAPETPQGPYTPQTPGMYGSDH---SYSPSPTAYQPSPSPTGYVT----TPSPVTF 938
Query: 145 LGATPSPS-----SEAAPYGTPSPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINE 199
TPSPS S P G PSP + P TPG G++Q EW + D+EVRI +
Sbjct: 939 QAGTPSPSTYGGYSPTTP-GAPSPFN-------PQTPGAGMEQLSV-EWQSVDLEVRIKD 989
Query: 200 NARDPEFRGQIGVIRHLGSGVCSVYLAEEERTLSIEAHELEPVMPQPN-DKVKVIVGEHK 258
GQ GVIR + G+CSV+L +E+R +SI + LEPV P DKVKV++GE +
Sbjct: 990 THEGEGLIGQTGVIRGISGGMCSVFLLKEDRVVSIPSEHLEPVPPTLRGDKVKVLMGEDR 1049
Query: 259 ECTGVLLSVDNGEGVVKLTEEDDVKMIDVKFLCK 292
E TG LLS+D EGVVK+ + M ++ CK
Sbjct: 1050 EETGELLSIDMREGVVKIFSSGKITMQPLRHFCK 1083
>gi|148237645|ref|NP_001089092.1| suppressor of Ty 5 homolog [Xenopus laevis]
gi|120537396|gb|AAI29067.1| LOC733281 protein [Xenopus laevis]
Length = 1083
Score = 153 bits (386), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 143/431 (33%), Positives = 197/431 (45%), Gaps = 146/431 (33%)
Query: 2 TGGF--MSPRISSPMHPSGGRGGRGGGRGGHHGGNVRR-DRELIGKTIKITGGPYK---- 54
GGF MSPRISSPMHPSGG GGG GG G R D +LIG+T++I+ GPYK
Sbjct: 660 VGGFAPMSPRISSPMHPSGGGPRGGGGGGGAAGRGRGRRDNDLIGQTVRISQGPYKGYIG 719
Query: 55 ------------------------------VGSRTPGG---------------------- 62
VG+R GG
Sbjct: 720 VVKDATESTARVELHSTCQTISVDRQRLTTVGARRSGGMTSTHVRTPIYGSQTPMYGTGS 779
Query: 63 ------GATPLHDGSRTP------------------GPWDPS--STPARSIHNDAYPMDD 96
TPLHDGSRTP G WDP+ +TP+R+ Y DD
Sbjct: 780 RTPMYGSQTPLHDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRADEEYDYRYDD 839
Query: 97 --------------------------SFNNSY-PHTPGT--MYGSS--------SEHTSY 119
N Y P TPGT MY + S SY
Sbjct: 840 EPSPSPQGYGGTPNPQTPGYPDVPSPQVNAPYHPQTPGTPAMYNTDQFSPYAAPSPQGSY 899
Query: 120 SPL-------QASPSPSGYQSHSGVSSGSSSYLGATPSPSS-EAAPYGTPSPLSYSSRQ- 170
P Q +PSP GYQ ++ S + TPSP + +A+P +PSP+ YS
Sbjct: 900 QPSPSPQSYHQVAPSPVGYQ-----NTHSPASYHPTPSPMAYQASP--SPSPMGYSPMTP 952
Query: 171 -------ASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGVCSV 223
+P TPG+ ++Q + +W TTDI+V++ + +D + GQ G++R + G+CSV
Sbjct: 953 GAPSPGGYNPHTPGSSIEQI-SSDWVTTDIQVKVRDTFQDSQVIGQTGIVRSVTGGLCSV 1011
Query: 224 YLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEEDDVK 283
L + E+ +SI LEPV P N +VKVI+GE +E TGVLLS+DN +G+V++ E+ +K
Sbjct: 1012 LLQDSEKVISISGDHLEPVTPTKNSRVKVILGEDREATGVLLSIDNEDGIVRMDLEEQLK 1071
Query: 284 MIDVKFLCKYK 294
++++ FL K +
Sbjct: 1072 ILNLHFLGKLE 1082
>gi|355755826|gb|EHH59573.1| hypothetical protein EGM_09714 [Macaca fascicularis]
Length = 951
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 129/337 (38%), Positives = 175/337 (51%), Gaps = 90/337 (26%)
Query: 2 TGGF--MSPRISSPMHPSGG-----RGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK 54
GGF MSPRISSPMHPS G G GGG GG G RRD ELIG+T++I+ GPYK
Sbjct: 655 VGGFAPMSPRISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYK 714
Query: 55 ----------------------------------VGSRTPGG-----GATPLHDGSRTPG 75
VGSR PGG G TP++ GS+TP
Sbjct: 715 GYIGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMY-GSQTPM 773
Query: 76 PWDPSSTPARSIHNDAYPMDDSFNNSYPHTPGTMYGSSSEHTSYSPLQASPSPSGYQSHS 135
S TP ++ P+ D + PH YGS + QASPSPS
Sbjct: 774 YGSGSRTP---MYGSQTPLQDG--DRTPH-----YGSQTP-------QASPSPS------ 810
Query: 136 GVSSGSSSYLGATPSPSSEAAPYGTPSPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEV 195
P S P G PSP Y+ P TPG+G++Q + +W TTDI+V
Sbjct: 811 -------------PVGYSPMTP-GAPSPGGYN-----PHTPGSGIEQ-NSSDWVTTDIQV 850
Query: 196 RINENARDPEFRGQIGVIRHLGSGVCSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVG 255
++ + D + GQ GVIR + G+CSVYL + E+ +SI + LEP+ P N+KVKVI+G
Sbjct: 851 KVRDTYLDTQVVGQTGVIRSVTGGMCSVYLKDSEKVVSISSEHLEPITPTKNNKVKVILG 910
Query: 256 EHKECTGVLLSVDNGEGVVKLTEEDDVKMIDVKFLCK 292
E +E TGVLLS+D +G+V++ ++ +K+++++FL K
Sbjct: 911 EDREATGVLLSIDGEDGIVRMDLDEQLKILNLRFLGK 947
>gi|67678018|gb|AAH97843.1| LOC733281 protein [Xenopus laevis]
Length = 610
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 142/431 (32%), Positives = 196/431 (45%), Gaps = 146/431 (33%)
Query: 2 TGGF--MSPRISSPMHPSGGRGGRGGGRGGHHGGNVRR-DRELIGKTIKITGGPYK---- 54
GGF MSPRISSPMHPSGG GGG GG G R D +LIG+T++I+ GPYK
Sbjct: 187 VGGFAPMSPRISSPMHPSGGGPRGGGGGGGAAGRGRGRRDNDLIGQTVRISQGPYKGYIG 246
Query: 55 ------------------------------VGSRTPGG---------------------- 62
VG+R GG
Sbjct: 247 VVKDATESTARVELHSTCQTISVDRQRLTTVGARRSGGMTSTHVRTPIYGSQTPMYGTGS 306
Query: 63 ------GATPLHDGSRTP------------------GPWDPS--STPARSIHNDAYPMDD 96
TPLHDGSRTP G WDP+ +TP+R+ Y DD
Sbjct: 307 RTPMYGSQTPLHDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRADEEYDYRYDD 366
Query: 97 --------------------------SFNNSY-PHTPGT----------MYGSSSEHTSY 119
N Y P TPGT Y + S SY
Sbjct: 367 EPSPSPQGYGGTPNPQTPGYPDVPSPQVNAPYHPQTPGTPAMYNTDQFSPYAAPSPQGSY 426
Query: 120 SPL-------QASPSPSGYQSHSGVSSGSSSYLGATPSPSS-EAAPYGTPSPLSYSSRQ- 170
P Q +PSP GYQ ++ S + TPSP + +A+P +PSP+ YS
Sbjct: 427 QPSPSPQSYHQVAPSPVGYQ-----NTHSPASYHPTPSPMAYQASP--SPSPMGYSPMTP 479
Query: 171 -------ASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGVCSV 223
+P TPG+ ++Q + +W TTDI+V++ + +D + GQ G++R + G+CSV
Sbjct: 480 GAPSPGGYNPHTPGSSIEQI-SSDWVTTDIQVKVRDTFQDSQVIGQTGIVRSVTGGLCSV 538
Query: 224 YLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEEDDVK 283
L + E+ +SI LEPV P N +VKVI+GE +E TGVLLS+DN +G+V++ E+ +K
Sbjct: 539 LLQDSEKVISISGDHLEPVTPTKNSRVKVILGEDREATGVLLSIDNEDGIVRMDLEEQLK 598
Query: 284 MIDVKFLCKYK 294
++++ FL K +
Sbjct: 599 ILNLHFLGKLE 609
>gi|260820493|ref|XP_002605569.1| hypothetical protein BRAFLDRAFT_282145 [Branchiostoma floridae]
gi|229290903|gb|EEN61579.1| hypothetical protein BRAFLDRAFT_282145 [Branchiostoma floridae]
Length = 951
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 115/297 (38%), Positives = 156/297 (52%), Gaps = 61/297 (20%)
Query: 52 PYKVGSRTPG-GGATPLHD-GSRTPG---PWDPSS--TPARSIHNDAYPMDDS------- 97
P G RTP G TPLHD GSRTPG WDP++ TP+R D Y DD+
Sbjct: 655 PQYEGGRTPHYGSQTPLHDDGSRTPGRTGAWDPTNPNTPSRPDDFD-YRFDDATPSPQGY 713
Query: 98 ------------------FNNSYPHTPGT-----MYGSSSEHTSYSP-------LQASPS 127
++S P TP T MYGS + ++ Y P QA+PS
Sbjct: 714 GAATPNPATPGYVSADSPADHSGPFTPQTPGTAGMYGSETTYSPYQPTPSPQGSYQATPS 773
Query: 128 PSGYQ---SHSGVSSGSS-SYLGATPSPSSEAAPYGTPSPLSYSSRQ--------ASPFT 175
P+GYQ S +G + S + ATPSP+ A TPSPL +S +P T
Sbjct: 774 PAGYQPAPSPAGYQATPSPAGYQATPSPAGYQA---TPSPLGFSPMTPGAPSPGGFNPQT 830
Query: 176 PGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGVCSVYLAEEERTLSIE 235
PG LDQ T +W T DI VRI E DP+ Q GVIR G+CSVYL+E ++ +++
Sbjct: 831 PGASLDQGGT-DWQTVDITVRIRETHEDPDLIHQRGVIRSQSGGMCSVYLSEADKMVNVM 889
Query: 236 AHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEEDDVKMIDVKFLCK 292
LEP P NDKVKVI+GE +E TG L+++D +G+V++ + +K++ ++FL K
Sbjct: 890 GEHLEPEAPAKNDKVKVILGEDREATGTLINIDGQDGIVRMDLDAQLKILQLRFLGK 946
>gi|193605997|ref|XP_001951771.1| PREDICTED: transcription elongation factor SPT5-like [Acyrthosiphon
pisum]
Length = 1066
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 110/256 (42%), Positives = 145/256 (56%), Gaps = 30/256 (11%)
Query: 53 YKVGSRTP-GGGATPLHDGSRTP-GPWDPSS--TPARSIHNDA-YPMDDSFNNSYPHTPG 107
Y+VG+RTP G TP HDGS+TP WDP++ TPAR +D YPMD Y TP
Sbjct: 823 YEVGNRTPHFGSMTPSHDGSKTPTQAWDPAAGYTPARVTDSDLEYPMDPG--TPYAQTPN 880
Query: 108 TMYGSSSEHTSYSPLQASPSPSG---YQSHSGVSSGSS--------SYLGATPSPSSEAA 156
T+YGSS SYSP QA SPSG Y S + ++ S S PSPS A
Sbjct: 881 TIYGSSDH--SYSPYQAI-SPSGGGGYNSSNSYANTPSPINTSSPRSIYHPAPSPSGSYA 937
Query: 157 PYGTPSPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHL 216
TPS +S S A+P GL P W TTDI VRI D + GQ G+IR +
Sbjct: 938 SLMTPSSVS-SPGLAAPSLTSFGL----PPGWQTTDIFVRIA----DSDLAGQTGIIRDV 988
Query: 217 GSGVCSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKL 276
CSVYL EEER ++IE LEP+MP+P+D VKV+ G +++ TG +++++ EGVV +
Sbjct: 989 SEATCSVYLPEEERVVTIENDNLEPIMPKPSDYVKVLCGSYRDRTGNMMAIEGSEGVVVM 1048
Query: 277 TEEDDVKMIDVKFLCK 292
+E + +I + LC+
Sbjct: 1049 PDEKNPILIPLLHLCR 1064
>gi|260820507|ref|XP_002605576.1| hypothetical protein BRAFLDRAFT_282155 [Branchiostoma floridae]
gi|229290910|gb|EEN61586.1| hypothetical protein BRAFLDRAFT_282155 [Branchiostoma floridae]
Length = 946
Score = 150 bits (379), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 115/297 (38%), Positives = 156/297 (52%), Gaps = 61/297 (20%)
Query: 52 PYKVGSRTPG-GGATPLHD-GSRTPG---PWDPSS--TPARSIHNDAYPMDDS------- 97
P G RTP G TPLHD GSRTPG WDP++ TP+R D Y DD+
Sbjct: 650 PQYEGGRTPHYGSQTPLHDDGSRTPGRTGAWDPTNPNTPSRPDDFD-YRFDDATPSPQGY 708
Query: 98 ------------------FNNSYPHTPGT-----MYGSSSEHTSYSP-------LQASPS 127
++S P TP T MYGS + ++ Y P QA+PS
Sbjct: 709 GAATPNPATPGYVSADSPADHSGPFTPQTPGTAGMYGSETTYSPYQPTPSPQGSYQATPS 768
Query: 128 PSGYQ---SHSGVSSGSS-SYLGATPSPSSEAAPYGTPSPLSYSSRQ--------ASPFT 175
P+GYQ S +G + S + ATPSP+ A TPSPL +S +P T
Sbjct: 769 PAGYQPAPSPAGYQATPSPAGYQATPSPAGYQA---TPSPLGFSPMTPGAPSPGGFNPQT 825
Query: 176 PGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGVCSVYLAEEERTLSIE 235
PG LDQ T +W T DI VRI E DP+ Q GVIR G+CSVYL+E ++ +++
Sbjct: 826 PGASLDQGGT-DWQTVDITVRIRETHEDPDLIHQRGVIRSQSGGMCSVYLSEADKMVNVM 884
Query: 236 AHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEEDDVKMIDVKFLCK 292
LEP P NDKVKVI+GE +E TG L+++D +G+V++ + +K++ ++FL K
Sbjct: 885 GEHLEPEAPAKNDKVKVILGEDREATGTLINIDGQDGIVRMDLDAQLKILQLRFLGK 941
>gi|410926453|ref|XP_003976693.1| PREDICTED: transcription elongation factor SPT5-like [Takifugu
rubripes]
Length = 1082
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 116/301 (38%), Positives = 159/301 (52%), Gaps = 67/301 (22%)
Query: 52 PYKVGSRTPG-GGATPLHDGSRTPG---PWDPSS--TPARSIHNDAYPMDD--------- 96
P GSRTP G TPLHDGSRTPG WDPS+ TP+R+ + DD
Sbjct: 790 PLHDGSRTPHYGSQTPLHDGSRTPGQSGAWDPSNPNTPSRNEEEYDFGYDDEPSPSPQGY 849
Query: 97 -----------------SFNNSY-PHTPGT--MYGSS--------SEHTSYSPL------ 122
N Y P TPGT MY + S SY P
Sbjct: 850 GGTPNPQTPGYPEVPSPQVNPQYNPQTPGTPAMYNTEQYSPYAAPSPQGSYQPSPSPQSY 909
Query: 123 -QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGTPSPLSYSSRQASP 173
Q +PSP GYQ +HS S + S A+PSPS S P G PSP Y+ P
Sbjct: 910 HQVAPSPVGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-GAPSPGGYN-----P 963
Query: 174 FTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGVCSVYLAEEERTLS 233
TPG+ ++Q + +W TTDI VR+ ++ D GQ GVIR + G+CSV++ E E+ +S
Sbjct: 964 HTPGSNIEQ-GSSDWVTTDILVRVKDSFMD--LMGQTGVIRSVTGGMCSVFMQESEKVVS 1020
Query: 234 IEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEEDDVKMIDVKFLCKY 293
I + LEPV P N+KVKVI+GE +E TG+LLS+D +G+V++ +D +K+++++FL +
Sbjct: 1021 ISSDHLEPVTPTKNNKVKVIMGEDREATGILLSIDGDDGIVRMELDDQLKILNLRFLGRL 1080
Query: 294 K 294
+
Sbjct: 1081 E 1081
>gi|432889364|ref|XP_004075240.1| PREDICTED: transcription elongation factor SPT5-like [Oryzias
latipes]
Length = 938
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 129/316 (40%), Positives = 178/316 (56%), Gaps = 42/316 (13%)
Query: 2 TGGF--MSPRISSPMH-PSGGRGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYKVG-- 56
GGF MSPRISSPMH GG RGGG GG G RRD ELIG+T++I GPYK
Sbjct: 633 VGGFAPMSPRISSPMHHGGGGAQQRGGGGGGMGRGRGRRDNELIGQTVRICQGPYKXXDF 692
Query: 57 ------SRTPGG-GATPLHDGSRTPGPWDPSSTPARSIHNDAYPMDDSFNNSYPHTPGTM 109
S +P G G TP +TPG + S +N P + N+ ++P
Sbjct: 693 GFDDEPSPSPQGYGGTP---NPQTPGYPEVPSPQVNPQYNPQTPGTPAMYNTEQYSP--- 746
Query: 110 YGSSSEHTSYSPL-------QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SE 154
Y + S SY P Q PSP GYQ +HS S + S A+PSPS S
Sbjct: 747 YAAPSPQGSYQPSPSPQSYHQVVPSPVGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSP 806
Query: 155 AAPYGTPSPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIR 214
P G PSP Y+ P TPG+ ++Q + +W TTDI VR+ ++ D GQ+GVIR
Sbjct: 807 MTP-GAPSPGGYN-----PHTPGSNIEQ-GSSDWVTTDILVRVKDSFMD--LMGQMGVIR 857
Query: 215 HLGSGVCSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVV 274
+ +CSV++ E E+ +SI + +LEPV P N+KVKVI+GE +E TG+LLS+D +G+V
Sbjct: 858 SVSGAMCSVFMQESEKVVSISSDQLEPVTPTKNNKVKVILGEDREATGILLSIDGDDGIV 917
Query: 275 KLTEEDDVKMIDVKFL 290
++ +D +K+++++FL
Sbjct: 918 RMELDDQLKILNLRFL 933
>gi|348523011|ref|XP_003449017.1| PREDICTED: transcription elongation factor SPT5-like [Oreochromis
niloticus]
Length = 1082
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 115/301 (38%), Positives = 160/301 (53%), Gaps = 67/301 (22%)
Query: 52 PYKVGSRTPG-GGATPLHDGSRTPG---PWDPSS--TPARSIHNDAYPMDD--------- 96
P GSRTP G TPLHDGSRTPG WDPS+ TP+R+ + + DD
Sbjct: 790 PLHDGSRTPHYGSQTPLHDGSRTPGQSGAWDPSNPNTPSRNEEDYDFGYDDEPSPSPQAY 849
Query: 97 -----------------SFNNSY-PHTPGT--MYGSS--------SEHTSYSPL------ 122
N Y P TPGT MY + S SY P
Sbjct: 850 GTTPNPQTPGYPEVPSPQVNPQYNPQTPGTPAMYNTEQYSPYAAPSPQGSYQPSPSPQSY 909
Query: 123 -QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGTPSPLSYSSRQASP 173
Q +PSP GYQ +HS S + S A+PSPS S P G PSP Y+ P
Sbjct: 910 HQVAPSPVGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-GAPSPGGYN-----P 963
Query: 174 FTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGVCSVYLAEEERTLS 233
TPG+ ++Q + +W TTDI VR+ ++ D GQ GVIR + G+CSV++ E E+ +S
Sbjct: 964 HTPGSNIEQGGS-DWVTTDILVRVKDSFMD--LMGQTGVIRSVTGGMCSVFMQETEKVVS 1020
Query: 234 IEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEEDDVKMIDVKFLCKY 293
+ + LEPV P N+KVKVI+GE +E TG+LLS+D +G+V++ +D +K+++++FL +
Sbjct: 1021 VSSDHLEPVTPTKNNKVKVILGEDREATGILLSIDGDDGIVRMELDDQLKILNLRFLGRL 1080
Query: 294 K 294
+
Sbjct: 1081 E 1081
Score = 37.7 bits (86), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 45/80 (56%), Gaps = 8/80 (10%)
Query: 2 TGGF--MSPRISSPMH-PSGGRGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK---- 54
GGF MSPRISSPMH GG RGGG GG G RRD ELIG+T++I+ GPYK
Sbjct: 660 VGGFAPMSPRISSPMHHGGGGAQQRGGGGGGMGRGRGRRDNELIGQTVRISQGPYKGYIG 719
Query: 55 -VGSRTPGGGATPLHDGSRT 73
V T LH +T
Sbjct: 720 VVKDATESTARVELHSTCQT 739
>gi|229577145|ref|NP_571748.2| transcription elongation factor SPT5 [Danio rerio]
Length = 1084
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 115/301 (38%), Positives = 156/301 (51%), Gaps = 65/301 (21%)
Query: 52 PYKVGSRTPG-GGATPLHDGSRTPG---PWDPSS--TPARSIHNDAYPMDD--------- 96
P GSRTP G TPLHDGSRTPG WDP++ TP+R + DD
Sbjct: 790 PLHDGSRTPHYGSQTPLHDGSRTPGQSGAWDPNNPNTPSRPDDEYEFAYDDEPSPSPQGY 849
Query: 97 -----------------SFNNSY-PHTPGT--MYGSS--------SEHTSYSPL------ 122
N Y P TPGT MY + S SY P
Sbjct: 850 GGTPNPQTPGYPEVPSPQVNPQYNPQTPGTPAMYNTEQYSPYAAPSPQGSYQPSPSPQSY 909
Query: 123 -QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGTPSPLSYSSRQASP 173
Q +PSP GYQ +HS S + S A+PSPS S P G PSP Y+ P
Sbjct: 910 HQVAPSPVGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-GAPSPGGYN-----P 963
Query: 174 FTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGVCSVYLAEEERTLS 233
TPG+ +DQ + +W TTDI VR+ + D Q G+IR + G+CSV+L + E+ +S
Sbjct: 964 HTPGSNIDQ-ASNDWVTTDIMVRVKDTFLDGGVINQTGIIRSVTGGMCSVFLQDTEKVVS 1022
Query: 234 IEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEEDDVKMIDVKFLCKY 293
I + LEPV P N+KVKVI+GE +E TGVLLS+D +G+V++ ++ +K+++++FL K
Sbjct: 1023 ISSEHLEPVTPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMELDEQLKILNLRFLGKL 1082
Query: 294 K 294
+
Sbjct: 1083 E 1083
>gi|82112887|sp|Q9DDT5.1|SPT5H_DANRE RecName: Full=Transcription elongation factor SPT5; AltName: Full=DRB
sensitivity-inducing factor large subunit; Short=DSIF
large subunit; AltName: Full=Protein foggy
gi|11527858|gb|AAG37030.1| transcription elongation regulator FOGGY [Danio rerio]
Length = 1084
Score = 147 bits (370), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 115/301 (38%), Positives = 156/301 (51%), Gaps = 65/301 (21%)
Query: 52 PYKVGSRTPG-GGATPLHDGSRTPG---PWDPSS--TPARSIHNDAYPMDD--------- 96
P GSRTP G TPLHDGSRTPG WDP++ TP+R + DD
Sbjct: 790 PLHDGSRTPHYGSQTPLHDGSRTPGQSGAWDPNNPNTPSRPDDEYEFAYDDEPSPSPQGY 849
Query: 97 -----------------SFNNSY-PHTPGT--MYGSS--------SEHTSYSPL------ 122
N Y P TPGT MY + S SY P
Sbjct: 850 GGTPNPQTPGYPEVPSPQVNPQYNPQTPGTPAMYNTDQYSPYAAPSPQGSYQPSPSPQSY 909
Query: 123 -QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGTPSPLSYSSRQASP 173
Q +PSP GYQ +HS S + S A+PSPS S P G PSP Y+ P
Sbjct: 910 HQVAPSPVGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-GAPSPGGYN-----P 963
Query: 174 FTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGVCSVYLAEEERTLS 233
TPG+ +DQ + +W TTDI VR+ + D Q G+IR + G+CSV+L + E+ +S
Sbjct: 964 HTPGSNIDQ-ASNDWVTTDIMVRVKDTFLDGGVINQTGIIRSVTGGMCSVFLQDTEKVVS 1022
Query: 234 IEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEEDDVKMIDVKFLCKY 293
I + LEPV P N+KVKVI+GE +E TGVLLS+D +G+V++ ++ +K+++++FL K
Sbjct: 1023 ISSEHLEPVTPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMELDEQLKILNLRFLGKL 1082
Query: 294 K 294
+
Sbjct: 1083 E 1083
>gi|357602005|gb|EHJ63237.1| hypothetical protein KGM_02129 [Danaus plexippus]
Length = 1036
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 135/377 (35%), Positives = 172/377 (45%), Gaps = 123/377 (32%)
Query: 1 MTGGFMSPRISSPMHPSGGRGGRGGGRGGHHGGNVRRDRELIGKTIK------------- 47
+ FMSPRI SPMHPSG GGRG GRGG V RDRELIG+TI
Sbjct: 694 LALAFMSPRIQSPMHPSGRGGGRGRGRGGRGA--VARDRELIGQTINRDATGSTARVELH 751
Query: 48 --------------ITGG---------------PYKVGSRTP-----------GGGATPL 67
GG P + G+ TP G ATP+
Sbjct: 752 TMCQTISVDRGHIAAAGGPNGIARGGASSYGRTPMRAGAHTPTYREAGLKTPLQGNATPI 811
Query: 68 ----------------HDGSRTPG--PWDPSSTPARSIHNDAYPMDDS--------FNNS 101
H+G RTP WD ++ R H+ ++ +
Sbjct: 812 YEAGARTPHYGSSTPAHEGGRTPAHPAWDAAAHTPRPDHDLLLASASPPPAASSSHYDAA 871
Query: 102 Y------PHTPGTMYGSSSEHTSYSPLQASPSPSGYQSHSGVSSGSSSYLGATPSPSSEA 155
Y P TPGTMYG S+HT YSP + SPSP Y + YL ATPSP
Sbjct: 872 YQQGPFTPQTPGTMYG--SDHT-YSPYRPSPSPGTY----------AGYL-ATPSP---- 913
Query: 156 APYGTPSPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRH 215
APY SP +P T D +WH D+EVR+ A +P RGQ G +R
Sbjct: 914 APY-------------SPRSPYTAED---ADDWHAPDLEVRVRGGA-EPGLRGQAGALRS 956
Query: 216 LGSGVCSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVK 275
+ C+VYL E+R L++ AH LEPV+P D+VKVI GE +E G L+S++N EGVVK
Sbjct: 957 VSGATCAVYLPLEDRVLNLPAHLLEPVVPHSGDRVKVIAGEDREAVGQLISIENQEGVVK 1016
Query: 276 LTEEDDVKMIDVKFLCK 292
DD+K++ ++ LCK
Sbjct: 1017 FG-SDDIKIMQLRHLCK 1032
>gi|47216456|emb|CAG02107.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1131
Score = 143 bits (360), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 113/316 (35%), Positives = 157/316 (49%), Gaps = 88/316 (27%)
Query: 53 YKVGSRTPG-GGATPLHDGSRTP------------------GPWDPS--STPARSIHNDA 91
Y GSRTP G TPLHDGSRTP G WDPS +TP+R+
Sbjct: 827 YGTGSRTPMYGSQTPLHDGSRTPHYGSQTPLHDGSRTPGQSGAWDPSNPNTPSRNEEEYD 886
Query: 92 YPMDD--------------------------SFNNSY-PHTPGT--MYGSSSEHTSYSPL 122
+ DD N Y P TPGT MY + YSP
Sbjct: 887 FGYDDEPSPSPQGYGGTPNPQTPGYPEVPSPQVNPQYNPQTPGTPAMYNTE----QYSPY 942
Query: 123 QASPSPSG-YQSHSGVSSGSSSYLGATPSP------SSEAAPYGTPSPLSYSSRQA---- 171
A+PSP G YQ S SY PSP S A+ + TPSP++Y A
Sbjct: 943 -AAPSPQGSYQP----SPSPQSYHQVAPSPVGYQNTHSPASYHPTPSPMAYQVVPAPSPV 997
Query: 172 ---------------SPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHL 216
+P TPG+ ++Q + +W TTDI VR+ ++ D GQ+GVIR +
Sbjct: 998 GYSPMTPGAPSPGGYNPHTPGSNIEQ-GSSDWVTTDILVRVKDSFMD--LMGQMGVIRSV 1054
Query: 217 GSGVCSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKL 276
G+CSV++ E E+ +SI + LEPV P N+KVKVI+GE +E TG+LLS+D +G+V++
Sbjct: 1055 TGGMCSVFMQESEKVVSISSDHLEPVTPTKNNKVKVIMGEDREATGILLSIDGDDGIVRM 1114
Query: 277 TEEDDVKMIDVKFLCK 292
+D +K+++++FL +
Sbjct: 1115 ELDDQLKILNLRFLGR 1130
>gi|158293811|ref|XP_001231045.2| AGAP005021-PA [Anopheles gambiae str. PEST]
gi|157016625|gb|EAU76692.2| AGAP005021-PA [Anopheles gambiae str. PEST]
Length = 1090
Score = 140 bits (352), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 137/408 (33%), Positives = 180/408 (44%), Gaps = 145/408 (35%)
Query: 3 GGFMSPRISSPMHPSGGRGGRGGGRGGHHG------GNVRRDRELIGKTIKITGGPYK-- 54
GG MSPRI SPMHPSGGRGG GGG V RDRE++G+TI+ITGGPYK
Sbjct: 707 GGIMSPRIHSPMHPSGGRGGGGGGPTRGGRGGGRGGARVSRDREILGRTIRITGGPYKGA 766
Query: 55 VG------------------------------------------------SRTPG---GG 63
VG SRTP G
Sbjct: 767 VGIVKDATETTARVELHSSCQTISVDRNHIAIVDGGATKAGSVSSYMRTPSRTPAGSYGA 826
Query: 64 ATPLHDGSRTP--------------------------------GPWDP--SSTPARSIHN 89
TP++ GS+TP G WDP S+TPARS N
Sbjct: 827 QTPVYSGSKTPLHGSQTPQYDPGSRTPYGSMTPSHDGSMTPRHGAWDPTVSNTPARS--N 884
Query: 90 DAYPMDD--------------SFNNSY-PHTPGTMYGSSSEHTSYSPLQASPSPSGYQSH 134
D M++ N Y PHTPG M+ + +YSP QASP+PS
Sbjct: 885 DFDFMEEPSPSPGYNPSTPGYQINTPYAPHTPGNMFNAD----NYSPYQASPNPS----- 935
Query: 135 SGVSSGSSSYLGATPSPSSEAAPYGTPSPLSYSSRQ----ASPF---TPGTGLDQYPTPE 187
PSP GTPSP +YS ASP+ TPG GLD +
Sbjct: 936 --------------PSPYQVGGYIGTPSPSAYSPATPGAPASPYNPQTPGAGLDPQ-LGD 980
Query: 188 WHTTDIEVRINENARDPEFRGQIGVIRHLGSGVCSVYLAEEERTLSIEAHELEPVMPQPN 247
W TTDIEV I + D + GQ G+IR + +G C V+L EE+ +++ L+PV+P+P
Sbjct: 981 WFTTDIEVTIRSHG-DSDLSGQTGIIRTVNNGDCVVFLPEEDHCVTVPLSNLQPVLPEPG 1039
Query: 248 DKVKVIVGEHKECTGVLLSVD-NGEGVVKLTEEDDVKMIDVKFLCKYK 294
+K KVIVGE +E G + + + E VV + + +I + ++ +Y+
Sbjct: 1040 EKFKVIVGEDRETVGEFIDMSGSNEAVVMINGQS--TLIPMNYMARYR 1085
>gi|312372578|gb|EFR20509.1| hypothetical protein AND_19976 [Anopheles darlingi]
Length = 1089
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/269 (38%), Positives = 140/269 (52%), Gaps = 56/269 (20%)
Query: 53 YKVGSRTPGGGATPLHDGSRTP--GPWDPS--STPARSIHNDAYPMDDS----------- 97
Y GSRTP G TP HDGS TP G WDPS +TPARS ND M+++
Sbjct: 845 YDPGSRTPYGSMTPSHDGSMTPRHGAWDPSVSNTPARS--NDFDFMEEASPSPGYNPSTP 902
Query: 98 ---FNNSY-PHTPGTMYGSSSEHTSYSPLQASPSPSGYQSHSGVSSGSSSYLGATPSPSS 153
N Y PHTPG M+ + + YSP QASP+PS PSP
Sbjct: 903 GYQINTPYAPHTPGNMFNTEN----YSPYQASPNPS-------------------PSPYQ 939
Query: 154 EAAPYGTPSPLSYSSRQ----ASPF---TPGTGLDQYPTPEWHTTDIEVRINENARDPEF 206
GTPSP +YS ASP+ TPG GLD +W TTDIEV I + D +
Sbjct: 940 VGGYIGTPSPSAYSPATPGAPASPYNPQTPGAGLDPQ-LGDWFTTDIEVTIRSHG-DSDL 997
Query: 207 RGQIGVIRHLGSGVCSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLS 266
GQ G+IR + +G C V+L EE+ +++ L+PV+P+P +K K+IVGE +E G ++
Sbjct: 998 SGQTGIIRSVNNGDCVVFLPEEDHCVTVNISNLQPVLPEPGEKFKIIVGEDRETIGDFIN 1057
Query: 267 VD-NGEGVVKLTEEDDVKMIDVKFLCKYK 294
+ + E VV + +I + +C+Y+
Sbjct: 1058 ISGSNEAVVSMNGH--TTLIPLNSMCRYR 1084
>gi|133777599|gb|AAI23816.1| SUPT5H protein [Bos taurus]
Length = 340
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/236 (39%), Positives = 138/236 (58%), Gaps = 25/236 (10%)
Query: 72 RTPGPWDPSSTPARSIHNDAYPMDDSFNNSYPHTPGTMYGSSSEHTSYSPL-------QA 124
+TPG DPSS +N P + N+ +P Y + S SY P Q
Sbjct: 111 QTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSP---YAAPSPQGSYQPSPSPQSYHQV 167
Query: 125 SPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGTPSPLSYSSRQASPFTP 176
+PSP+GYQ +HS S + S A+PSPS S P G PSP Y+ P TP
Sbjct: 168 APSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-GAPSPGGYN-----PHTP 221
Query: 177 GTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGVCSVYLAEEERTLSIEA 236
G+G++Q + +W TTDI+V++ + D + GQ GVIR + G+CSVYL + E+ +SI +
Sbjct: 222 GSGIEQNSS-DWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGMCSVYLKDSEKVVSISS 280
Query: 237 HELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEEDDVKMIDVKFLCK 292
LEP+ P N+KVKVI+GE +E TGVLLS+D +G+V++ ++ +K+++++FL K
Sbjct: 281 EHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRFLGK 336
>gi|332029066|gb|EGI69080.1| Transcription elongation factor SPT5 [Acromyrmex echinatior]
Length = 1072
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/272 (39%), Positives = 143/272 (52%), Gaps = 31/272 (11%)
Query: 44 KTIKITGGPYKVGSRTP--GGGATPLHDGSRTPG---PWDP--SSTPARSIHNDAYPMDD 96
+ I+ T + GSRTP G T HDGSRTPG WDP S+TP + + Y M+
Sbjct: 802 RCIRRTHQKHLHGSRTPHYAGSMTSSHDGSRTPGQSEAWDPTISNTPVSTNDFEEYKMEK 861
Query: 97 --------SFNN----SYPHTPGTMYGSSSEHTSY--SPLQASPSPSGYQSHSGVSSGSS 142
S N+ S+ MYGS + S SP+++S S Y+S S SS S+
Sbjct: 862 GGSWVGYPSENSPTEGSFIPQTSIMYGSEQTYGSCHSSPIESSIVNSNYESCSASSSTST 921
Query: 143 SYLGATPSPSSEAAPYGTPSPLSYS-SRQASPFTPGTGLDQYPTPEWHTTDIEVRINENA 201
Y+ S + TPSP Y S + TP G++ WHTTDIEVRI
Sbjct: 922 GYI-------SSYNAFLTPSPGDYIPSNPYNLLTPRLGMNADDNSNWHTTDIEVRIRNTH 974
Query: 202 RDPEFRGQIGVIRHLGSGVCSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVG-EHKEC 260
D GQ GVIR + +C+VYL E R +SI +L+ V+P D+VKVI+G E++E
Sbjct: 975 DDLALVGQKGVIRQVFGDICTVYLPMENRAVSIVRRQLDFVVPSCGDRVKVILGEENREA 1034
Query: 261 TGVLLSVDNGEGVVKLTEEDDVKMIDVKFLCK 292
G LLS+D EGVVKLT D++K + +FL K
Sbjct: 1035 VGTLLSIDYQEGVVKLT-TDEIKFVQFRFLGK 1065
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 47/85 (55%), Gaps = 11/85 (12%)
Query: 2 TGGFMSPRISSPMHPSGGRGGRGGGRGGHHGGNVRR----DRELIGKTIKITGGPYKVGS 57
GFMSPRI+SPMHPSGG GRGGG G G DRELIG TIKITGGPYK
Sbjct: 685 VAGFMSPRIASPMHPSGGGFGRGGGGGRGRGRGGGGGARRDRELIGTTIKITGGPYK--- 741
Query: 58 RTPGGGATPLHDGSRTPGPWDPSST 82
G + D + T + ST
Sbjct: 742 ----GNVGIVKDATETTARVERHST 762
>gi|291241653|ref|XP_002740721.1| PREDICTED: suppressor of Ty 5 homolog [Saccoglossus kowalevskii]
Length = 1095
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 114/300 (38%), Positives = 156/300 (52%), Gaps = 66/300 (22%)
Query: 52 PYKVGSRTPG-GGATPLHDGSRTPG---PWDPSS--TPARSIHNDAYPMDDSF------- 98
P GSRTP G TPLHDGSRTPG WDP++ TPAR+ D Y D+
Sbjct: 802 PLHDGSRTPHYGSQTPLHDGSRTPGQTGAWDPTNRNTPARTDEFD-YRFDEPTPSPAYGG 860
Query: 99 ----------------NNSY-PHTPG--TMYGSSSEHTSYSPLQ--ASPSPSGYQSHSGV 137
N Y P TPG TMY SSS+HT YSP Q ++PSP GYQ
Sbjct: 861 TPNPATPGYSADTPPSNGPYTPATPGSSTMY-SSSDHT-YSPYQHSSTPSPGGYQG---- 914
Query: 138 SSGSSSYLGA--------TPSPSSEAAP-----YGTPSPLSY-------SSRQASPFTPG 177
+ ++Y A TPSP+ + +P TPSP Y S +P TPG
Sbjct: 915 TPSPANYQPAPSPGGYQPTPSPAYQQSPSPGGYQLTPSPGGYPMTPGAPSPGGFNPLTPG 974
Query: 178 TGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGVCSVYLAEEERTLSIEAH 237
LD + EW T IEV++ D +IGVIR + G+CSV++ +E R +++ +
Sbjct: 975 ASLDS-GSSEWQTIHIEVKVKATHEDSALIYKIGVIRGISGGMCSVFIPDEGRVVNVHSD 1033
Query: 238 ELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTE----EDDVKMIDVKFLCKY 293
LEPVMP DKVKVI+GE +E TG L+++D +G+VK+ + + +K++ + L K+
Sbjct: 1034 HLEPVMPSKQDKVKVILGEDRESTGTLINIDGQDGIVKMDQAVGSDVQLKILHLGHLGKF 1093
>gi|390356004|ref|XP_003728680.1| PREDICTED: transcription elongation factor SPT5-like
[Strongylocentrotus purpuratus]
Length = 1089
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 104/302 (34%), Positives = 145/302 (48%), Gaps = 62/302 (20%)
Query: 53 YKVGSRTPG-GGATPLHDGSRTP------------------GPWDPSSTPARSIHNDAYP 93
Y GSRTP G TPLHDG TP G WDP++ +++ P
Sbjct: 785 YGSGSRTPMYGSQTPLHDGGGTPHYGSMTPSRDGSMTPSRSGAWDPTAPSTPMSFDESSP 844
Query: 94 MDDSFNNSYPHTPGT----------------------MYGSSSEHTSYSPLQASPSPSGY 131
+ ++ P TPG MYGS S ++ Y SPSP Y
Sbjct: 845 SPQPYGSTTPGTPGYSGEPQSPGQGPYTPATPNSSSGMYGSESTYSPYGGQTQSPSPGSY 904
Query: 132 Q-----SHSGVSSGSSSYLGATPSPS------SEAAPYGTPSPLSYSSRQ--------AS 172
Q S S + S ATPSPS S + G PSPL YS+ +
Sbjct: 905 QPTPSPSSSFQPAPSPGSYQATPSPSGTYHTPSPGSYQGNPSPLGYSANTPMAPSPLGYN 964
Query: 173 PFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGVCSVYLAE-EERT 231
P TPG + +WHT DI VRI ++ DP + GVIR + +CSVYL + E+R
Sbjct: 965 PQTPGGDIMHPAQSDWHTQDIMVRIKDSHDDPSLIFKEGVIRSVQGPLCSVYLPDGEDRV 1024
Query: 232 LSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTE-EDDVKMIDVKFL 290
++++A LEPVMP D+VKVI+G+ +E TG L+++D +G+VK+ D+K++ +K L
Sbjct: 1025 VTVKALHLEPVMPSKTDRVKVIMGDDRESTGTLINIDAEDGIVKMDLGAADIKILQLKML 1084
Query: 291 CK 292
K
Sbjct: 1085 AK 1086
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 71/195 (36%), Positives = 86/195 (44%), Gaps = 31/195 (15%)
Query: 6 MSPRISSPMHPSGGRGGRGGGRGGHHGGNVRR-----DRELIGKTIKITGGPYK-----V 55
MSPRI+SPMHPSGG +G G GG GG R DRELIG+T++IT GP+K V
Sbjct: 671 MSPRITSPMHPSGGGQQQGPGAGGPGGGGRGRGRVGRDRELIGQTVRITKGPFKGHIGIV 730
Query: 56 GSRTPGGGATPLHDGSRT----PGPWDPSSTPARSIHNDAYPMDDSFNNSYPHTPGTMYG 111
T LH +T G + S RS AY + S TP MYG
Sbjct: 731 KDATESTARIELHSTCKTINVDRGRMNIVSDQVRSGMTTAYSRNTPMYGS--QTP--MYG 786
Query: 112 SSSE---HTSYSPLQASPSPSGYQSHSGVSSGSSSYLGATPSPSSEAAPYGTPSPLSYSS 168
S S + S +PL Y S + GS TPS S P +P+S+
Sbjct: 787 SGSRTPMYGSQTPLHDGGGTPHYGSMTPSRDGS-----MTPSRSGAWDPTAPSTPMSFDE 841
Query: 169 RQASP-----FTPGT 178
SP TPGT
Sbjct: 842 SSPSPQPYGSTTPGT 856
>gi|156368739|ref|XP_001627850.1| predicted protein [Nematostella vectensis]
gi|156214810|gb|EDO35787.1| predicted protein [Nematostella vectensis]
Length = 490
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/269 (38%), Positives = 144/269 (53%), Gaps = 59/269 (21%)
Query: 56 GSRTP--GGGATPLHDGSRTP---GPWDPS--STPARSIHNDAYPMDDSF---------N 99
GSRTP GG TP HD SRTP G WDP+ +TPAR+ D Y D S N
Sbjct: 243 GSRTPHYGGSMTPSHDPSRTPLHGGAWDPTLPNTPARNDDFD-YGFDASTPSPAAGYAPN 301
Query: 100 NSYPHTPG-------------TMYGSSSEHTSYSPLQASPSPSGYQSHSGVSSGSSSYLG 146
P TPG MYGS +YSP SPSP+GY
Sbjct: 302 TPNPATPGGYGGPYTPNTPGPAMYGSEP---TYSPYTQSPSPAGY--------------- 343
Query: 147 ATPSPSSEAAPYGTPSPLSYSSRQASPFTPGTGLDQYPTP---EWHTTDIEVRINENARD 203
++ P G P+S + +P TPG GL++ T EW TTDIEVRINEN D
Sbjct: 344 -----ANPMTPGGGLPPVSPAY---NPHTPGAGLEEPSTSGPGEWVTTDIEVRINENYED 395
Query: 204 PEFRGQIGVIRHLGSGVCSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGV 263
P+ ++GV+R + GVC+VYL +E R++S ++ V P DKVKVIVG+++E TG
Sbjct: 396 PQLLDKVGVVRDVVGGVCTVYLPDEGRSISTVGAHIDAVQPDKQDKVKVIVGDYRERTGT 455
Query: 264 LLSVDNGEGVVKLTEEDDVKMIDVKFLCK 292
L+++D+ +G++K+ +++K++ + +L K
Sbjct: 456 LINIDDKDGIIKMDRPEELKILPLDYLAK 484
>gi|195335874|ref|XP_002034588.1| GM21959 [Drosophila sechellia]
gi|194126558|gb|EDW48601.1| GM21959 [Drosophila sechellia]
Length = 1078
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 95/266 (35%), Positives = 135/266 (50%), Gaps = 49/266 (18%)
Query: 53 YKVGSRTPGGGATPLHDGSRTP--GPWDPSS--TPARSIHND-----------------A 91
+ +RTP G TP HDGS TP G WDP++ TPAR+ D
Sbjct: 835 WDTDTRTPYGTMTPSHDGSMTPRHGAWDPTANTTPARNNDFDYSLEEPSPSPGYNPSTPG 894
Query: 92 YPMDDSFNNSYPHTPGTMYGSSSEHTSYSPLQASPSPS---GYQSHSGVSSGSSSYLGAT 148
Y M F P TPGT+YGS ++ ++P + GY + T
Sbjct: 895 YQMTSQFA---PQTPGTLYGSDRSYSPFNPSPSPAPSPYPVGYMN--------------T 937
Query: 149 PSPSSEAAPYGTPSPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRG 208
PSPS+ Y +P +P TPG LD +W TTDIEVRI+ + D + G
Sbjct: 938 PSPST----YSPNTPGGIPQSPYNPQTPGASLDS-SMGDWCTTDIEVRIHTHD-DTDLVG 991
Query: 209 QIGVIRHLGSGVCSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVD 268
Q G+IR + +GVCSV+L +E+R++SI + L PV+P D+ K+I G+ +E G +LS D
Sbjct: 992 QTGIIRTVSNGVCSVFLRQEDRSVSIVSEHLAPVLPSNGDEFKIIYGDDRESVGRVLSKD 1051
Query: 269 NGEGVVKLTEEDDVKMIDVKFLCKYK 294
V ++ E D+K++ + FLCK K
Sbjct: 1052 GDVFVCRINE--DIKLLPINFLCKMK 1075
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 48/75 (64%), Gaps = 5/75 (6%)
Query: 4 GFMSPRISSPMHPSGGRGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK-----VGSR 58
GFMSPRI SPMHPS GRG RGG RGG G V RDRE++GKTIKI+GGPYK V
Sbjct: 704 GFMSPRIQSPMHPSAGRGARGGARGGRGGFRVTRDREILGKTIKISGGPYKGAVGIVKDA 763
Query: 59 TPGGGATPLHDGSRT 73
T LH +T
Sbjct: 764 TESTARVELHTSCQT 778
>gi|195028306|ref|XP_001987017.1| GH20202 [Drosophila grimshawi]
gi|193903017|gb|EDW01884.1| GH20202 [Drosophila grimshawi]
Length = 1082
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/266 (37%), Positives = 133/266 (50%), Gaps = 48/266 (18%)
Query: 53 YKVGSRTPGGGATPLHDGSRTP--GPWDPSS--TPARSIHND-----------------A 91
+ +RTP G TP HDGS TP G WDP++ TPAR+ D
Sbjct: 838 WDTDTRTPYGTMTPSHDGSMTPRHGAWDPTANTTPARNTDFDYSLEEPSPSPGYNPSTPG 897
Query: 92 YPMDDSFNNSYPHTPGTMYGSSSEHTSYSPLQASPSPS---GYQSHSGVSSGSSSYLGAT 148
Y M F P TPGT+YGS ++ ++P + GY + T
Sbjct: 898 YQMSSQF---APQTPGTLYGSDRSYSPFNPSPSPAPSPYPVGYMN--------------T 940
Query: 149 PSPSSEAAPYGTPSPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRG 208
PSPS+ Y +P +P TPG LD +W TTDIEVRI+ + D + G
Sbjct: 941 PSPST----YSPNTPGGVPQSPYNPQTPGASLDS-SMGDWCTTDIEVRIHTHD-DTDLVG 994
Query: 209 QIGVIRHLGSGVCSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVD 268
Q G+IR + +GVCSV+L +E+R++SI + L PV P D+ KVI GE +E G +LS
Sbjct: 995 QTGIIRTVSNGVCSVFLRQEDRSVSIVSEHLAPVPPNSGDEFKVIYGEERESVGKVLSKQ 1054
Query: 269 NGEGVVKLTEEDDVKMIDVKFLCKYK 294
G+ V+ DDVKMI + LCK K
Sbjct: 1055 EGD-VLVCKINDDVKMIPINHLCKMK 1079
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 48/75 (64%), Gaps = 5/75 (6%)
Query: 4 GFMSPRISSPMHPSGGRGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK-----VGSR 58
GFMSPRI SPMHPSGGRG RGG RGG G V RDREL+GKTIKI GGPYK V
Sbjct: 707 GFMSPRIQSPMHPSGGRGARGGSRGGRGGFRVTRDRELLGKTIKICGGPYKGAVGIVKDA 766
Query: 59 TPGGGATPLHDGSRT 73
T LH +T
Sbjct: 767 TESTARVELHTSCQT 781
>gi|195584876|ref|XP_002082230.1| GD11454 [Drosophila simulans]
gi|194194239|gb|EDX07815.1| GD11454 [Drosophila simulans]
Length = 881
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 95/266 (35%), Positives = 135/266 (50%), Gaps = 49/266 (18%)
Query: 53 YKVGSRTPGGGATPLHDGSRTP--GPWDPS--STPARSIHND-----------------A 91
+ +RTP G TP HDGS TP G WDP+ +TPAR+ D
Sbjct: 638 WDTDTRTPYGTMTPSHDGSMTPRHGAWDPTANTTPARNNDFDYSLEEPSPSPGYNPSTPG 697
Query: 92 YPMDDSFNNSYPHTPGTMYGSSSEHTSYSPLQASPSPS---GYQSHSGVSSGSSSYLGAT 148
Y M F P TPGT+YGS ++ ++P + GY + T
Sbjct: 698 YQMTSQFA---PQTPGTLYGSDRSYSPFNPSPSPAPSPYPVGYMN--------------T 740
Query: 149 PSPSSEAAPYGTPSPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRG 208
PSPS+ Y +P +P TPG LD +W TTDIEVRI+ + D + G
Sbjct: 741 PSPST----YSPNTPGGIPQSPYNPQTPGASLDS-SMGDWCTTDIEVRIHTHD-DTDLVG 794
Query: 209 QIGVIRHLGSGVCSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVD 268
Q G+IR + +GVCSV+L +E+R++SI + L PV+P D+ K+I G+ +E G +LS D
Sbjct: 795 QTGIIRTVSNGVCSVFLRQEDRSVSIVSEHLAPVLPSNGDEFKIIYGDDRESVGRVLSKD 854
Query: 269 NGEGVVKLTEEDDVKMIDVKFLCKYK 294
V ++ E D+K++ + FLCK K
Sbjct: 855 GDVFVCRINE--DIKLLPINFLCKMK 878
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 48/75 (64%), Gaps = 5/75 (6%)
Query: 4 GFMSPRISSPMHPSGGRGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK-----VGSR 58
GFMSPRI SPMHPS GRG RGG RGG G V RDRE++GKTIKI+GGPYK V
Sbjct: 507 GFMSPRIQSPMHPSAGRGARGGARGGRGGFRVTRDREILGKTIKISGGPYKGAVGIVKDA 566
Query: 59 TPGGGATPLHDGSRT 73
T LH +T
Sbjct: 567 TESTARVELHTSCQT 581
>gi|25012655|gb|AAN71423.1| RE49559p [Drosophila melanogaster]
gi|220945972|gb|ACL85529.1| Spt5-PB [synthetic construct]
Length = 962
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 95/266 (35%), Positives = 135/266 (50%), Gaps = 49/266 (18%)
Query: 53 YKVGSRTPGGGATPLHDGSRTP--GPWDPSS--TPARSIHND-----------------A 91
+ +RTP G TP HDGS TP G WDP++ TPAR+ D
Sbjct: 719 WDTDTRTPYGTMTPSHDGSMTPRHGAWDPTANTTPARNNDFDYSLEEPSPSPGYNPSTPG 778
Query: 92 YPMDDSFNNSYPHTPGTMYGSSSEHTSYSPLQASPSPS---GYQSHSGVSSGSSSYLGAT 148
Y M F P TPGT+YGS ++ ++P + GY + T
Sbjct: 779 YQMTSQFA---PQTPGTLYGSDRSYSPFNPSPSPAPSPYPVGYMN--------------T 821
Query: 149 PSPSSEAAPYGTPSPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRG 208
PSPS+ Y +P +P TPG LD +W TTDIEVRI+ + D + G
Sbjct: 822 PSPST----YSPNTPGGIPQSPYNPQTPGASLDS-SMGDWCTTDIEVRIHTHD-DTDLVG 875
Query: 209 QIGVIRHLGSGVCSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVD 268
Q G+IR + +GVCSV+L +E+R++SI + L PV+P D+ K+I G+ +E G +LS D
Sbjct: 876 QTGIIRTVSNGVCSVFLRQEDRSVSIVSEHLAPVLPCNGDEFKIIYGDDRESVGRVLSKD 935
Query: 269 NGEGVVKLTEEDDVKMIDVKFLCKYK 294
V ++ EE +K++ + FLCK K
Sbjct: 936 GDVFVCRINEE--IKLLPINFLCKMK 959
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 49/75 (65%), Gaps = 5/75 (6%)
Query: 4 GFMSPRISSPMHPSGGRGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK-----VGSR 58
GFMSPRI SPMHPSGGRG RGG RGG G V RDRE++GKTIKI+GGPYK V
Sbjct: 588 GFMSPRIQSPMHPSGGRGARGGARGGRGGFRVTRDREILGKTIKISGGPYKGAVGIVKDA 647
Query: 59 TPGGGATPLHDGSRT 73
T LH +T
Sbjct: 648 TESTARVELHTSCQT 662
>gi|21358129|ref|NP_652610.1| Spt5 [Drosophila melanogaster]
gi|75026270|sp|Q9V460.1|SPT5H_DROME RecName: Full=Transcription elongation factor SPT5; AltName: Full=DRB
sensitivity-inducing factor large subunit; Short=DSIF
large subunit; AltName: Full=dSpt5
gi|6980000|gb|AAF34689.1|AF222864_1 Dspt5 [Drosophila melanogaster]
gi|7302477|gb|AAF57561.1| Spt5 [Drosophila melanogaster]
gi|73853381|gb|AAZ86761.1| LD10265p [Drosophila melanogaster]
gi|220950398|gb|ACL87742.1| Spt5-PA [synthetic construct]
Length = 1078
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 95/266 (35%), Positives = 135/266 (50%), Gaps = 49/266 (18%)
Query: 53 YKVGSRTPGGGATPLHDGSRTP--GPWDPS--STPARSIHND-----------------A 91
+ +RTP G TP HDGS TP G WDP+ +TPAR+ D
Sbjct: 835 WDTDTRTPYGTMTPSHDGSMTPRHGAWDPTANTTPARNNDFDYSLEEPSPSPGYNPSTPG 894
Query: 92 YPMDDSFNNSYPHTPGTMYGSSSEHTSYSPLQASPSPS---GYQSHSGVSSGSSSYLGAT 148
Y M F P TPGT+YGS ++ ++P + GY + T
Sbjct: 895 YQMTSQFA---PQTPGTLYGSDRSYSPFNPSPSPAPSPYPVGYMN--------------T 937
Query: 149 PSPSSEAAPYGTPSPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRG 208
PSPS+ Y +P +P TPG LD +W TTDIEVRI+ + D + G
Sbjct: 938 PSPST----YSPNTPGGIPQSPYNPQTPGASLDS-SMGDWCTTDIEVRIHTHD-DTDLVG 991
Query: 209 QIGVIRHLGSGVCSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVD 268
Q G+IR + +GVCSV+L +E+R++SI + L PV+P D+ K+I G+ +E G +LS D
Sbjct: 992 QTGIIRTVSNGVCSVFLRQEDRSVSIVSEHLAPVLPCNGDEFKIIYGDDRESVGRVLSKD 1051
Query: 269 NGEGVVKLTEEDDVKMIDVKFLCKYK 294
V ++ EE +K++ + FLCK K
Sbjct: 1052 GDVFVCRINEE--IKLLPINFLCKMK 1075
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 84/163 (51%), Gaps = 21/163 (12%)
Query: 4 GFMSPRISSPMHPSGGRGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYKVGSRTPGGG 63
GFMSPRI SPMHPSGGRG RGG RGG G V RDRE++GKTIKI+GGPYK G
Sbjct: 704 GFMSPRIQSPMHPSGGRGARGGARGGRGGFRVTRDREILGKTIKISGGPYK-------GA 756
Query: 64 ATPLHDGSRTPGPWDPSSTPARSIHNDAYPMDDSFNNSYPHTPGTMYGSSSEHTSYSPLQ 123
+ D + ST +H + S + ++ G + G ++Y
Sbjct: 757 VGIVKDAT--------ESTARVELHTSCQTI--SVDRNHIAIVG-VTGKEGSVSTYGRTP 805
Query: 124 ASPSPSGYQSHSGVSSGSSSYLGATPSPSSEA---APYGTPSP 163
A G Q+ S ++GS + L + +P+ + PYGT +P
Sbjct: 806 ARTPGYGAQTPSYTAAGSKTPLVGSQTPNWDTDTRTPYGTMTP 848
>gi|296477821|tpg|DAA19936.1| TPA: suppressor of Ty 5 homolog [Bos taurus]
Length = 324
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/220 (40%), Positives = 126/220 (57%), Gaps = 25/220 (11%)
Query: 72 RTPGPWDPSSTPARSIHNDAYPMDDSFNNSYPHTPGTMYGSSSEHTSYSPL-------QA 124
+TPG DPSS +N P + N+ +P Y + S SY P Q
Sbjct: 111 QTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSP---YAAPSPQGSYQPSPSPQSYHQV 167
Query: 125 SPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGTPSPLSYSSRQASPFTP 176
+PSP+GYQ +HS S + S A+PSPS S P G PSP Y+ P TP
Sbjct: 168 APSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-GAPSPGGYN-----PHTP 221
Query: 177 GTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGVCSVYLAEEERTLSIEA 236
G+G++Q + +W TTDI+V++ + D + GQ GVIR + G+CSVYL + E+ +SI +
Sbjct: 222 GSGIEQNSS-DWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGMCSVYLKDSEKVVSISS 280
Query: 237 HELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKL 276
LEP+ P N+KVKVI+GE +E TGVLLS+D +G+V++
Sbjct: 281 EHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRM 320
>gi|195382455|ref|XP_002049945.1| GJ20465 [Drosophila virilis]
gi|194144742|gb|EDW61138.1| GJ20465 [Drosophila virilis]
Length = 1085
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 102/269 (37%), Positives = 136/269 (50%), Gaps = 54/269 (20%)
Query: 53 YKVGSRTPGGGATPLHDGSRTP--GPWDPSS--TPARSIHND-----------------A 91
+ +RTP G TP HDGS TP G WDP++ TPAR+ D
Sbjct: 841 WDTDTRTPYGTMTPSHDGSMTPRHGAWDPTANTTPARNTDFDYSLEEPSPSPGYNPSTPG 900
Query: 92 YPMDDSFNNSYPHTPGTMYGSSSEHTSYSPLQASPSPS---GYQSHSGVSSGSSSYLGAT 148
Y M F P TPGT+YGS ++ ++P + GY + T
Sbjct: 901 YQMSSQF---APQTPGTLYGSDRSYSPFNPSPSPAPSPYPVGYMN--------------T 943
Query: 149 PSPSSEA--APYGTP-SPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPE 205
PSPS+ + P G P SP + P TPG LD +W TTDIEVRI+ + D +
Sbjct: 944 PSPSTYSPNTPGGVPQSPYN-------PQTPGASLDS-SMGDWCTTDIEVRIHTHD-DTD 994
Query: 206 FRGQIGVIRHLGSGVCSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLL 265
GQ G+IR + +GVCSV+L +E+R++SI + L PV P D+ KVI GE +E G +L
Sbjct: 995 LVGQTGIIRTVSNGVCSVFLRQEDRSVSIVSEHLAPVPPNSGDEFKVIYGEERESVGKVL 1054
Query: 266 SVDNGEGVVKLTEEDDVKMIDVKFLCKYK 294
S G+ V+ D+VKMI V LCK K
Sbjct: 1055 SKQEGD-VLVCKINDEVKMIPVNHLCKMK 1082
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 48/75 (64%), Gaps = 5/75 (6%)
Query: 4 GFMSPRISSPMHPSGGRGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK-----VGSR 58
GFMSPRI SPMHPSGGRG RGG RGG G V RDREL+GKTIKI GGPYK V
Sbjct: 710 GFMSPRIQSPMHPSGGRGARGGSRGGRGGFRVTRDRELLGKTIKICGGPYKGAVGIVKDA 769
Query: 59 TPGGGATPLHDGSRT 73
T LH +T
Sbjct: 770 TESTARVELHTSCQT 784
>gi|125806983|ref|XP_001360216.1| GA20489 [Drosophila pseudoobscura pseudoobscura]
gi|195149331|ref|XP_002015611.1| GL10931 [Drosophila persimilis]
gi|54635387|gb|EAL24790.1| GA20489 [Drosophila pseudoobscura pseudoobscura]
gi|194109458|gb|EDW31501.1| GL10931 [Drosophila persimilis]
Length = 1080
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/263 (38%), Positives = 133/263 (50%), Gaps = 42/263 (15%)
Query: 53 YKVGSRTPGGGATPLHDGSRTP--GPWDPSS--TPARSIHND-----------------A 91
+ +RTP G TP HDGS TP G WDP++ TPAR+ D
Sbjct: 836 WDTDTRTPYGTMTPSHDGSMTPRHGAWDPTANTTPARNNDFDYSLEEPSPSPGYNPSTPG 895
Query: 92 YPMDDSFNNSYPHTPGTMYGSSSEHTSYSPLQASPSPSGYQSHSGVSSGSSSYLGATPSP 151
Y M F P TPGT+YGS ++ ++P + S YL TPSP
Sbjct: 896 YQMTSQF---APQTPGTLYGSDRSYSPFNPSPSPAP----------SPYPVGYLN-TPSP 941
Query: 152 SSEAAPYGTPSPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIG 211
S+ Y +P +P TPG LD +W TTDIEVRI+ + D + GQ G
Sbjct: 942 ST----YSPNTPGGIPQSPYNPQTPGASLDS-SMGDWCTTDIEVRIHTHD-DTDLVGQTG 995
Query: 212 VIRHLGSGVCSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGE 271
+IR + +GVCSV+L +E+R++SI + L PV P D+ KVI GE +E G +LS G+
Sbjct: 996 IIRTVSNGVCSVFLRQEDRSVSIVSEHLAPVPPNSGDEFKVIYGEERESVGRVLSKQEGD 1055
Query: 272 GVVKLTEEDDVKMIDVKFLCKYK 294
V+ D+VKMI V LCK K
Sbjct: 1056 -VLVCKINDEVKMIPVNHLCKMK 1077
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 48/76 (63%), Gaps = 6/76 (7%)
Query: 4 GFMSPRISSPMHPSGGRGGRGGGRGGHHGG-NVRRDRELIGKTIKITGGPYK-----VGS 57
GFMSPRI SPMHPSGGRGG GG G GG V RDRE++GKTIKI+GGPYK V
Sbjct: 704 GFMSPRIQSPMHPSGGRGGARGGARGGRGGFRVTRDREILGKTIKISGGPYKGAVGIVKD 763
Query: 58 RTPGGGATPLHDGSRT 73
T LH +T
Sbjct: 764 ATEATARVELHTSCQT 779
>gi|34785805|gb|AAH57529.1| Supt5h protein [Danio rerio]
Length = 856
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/217 (40%), Positives = 124/217 (57%), Gaps = 32/217 (14%)
Query: 103 PHTPGT--MYGSS--------SEHTSYSPL-------QASPSPSGYQ-SHSGVS---SGS 141
P TPGT MY + S SY P Q +PSP GYQ +HS S + S
Sbjct: 646 PQTPGTPAMYNTDQYSPYAAPSPQGSYQPSPSPQSYHQVAPSPVGYQNTHSPASYHPTPS 705
Query: 142 SSYLGATPSPS----SEAAPYGTPSPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRI 197
A+PSPS S P G PSP Y+ P TPG+ +DQ + +W TTDI VR+
Sbjct: 706 PMAYQASPSPSPVGYSPMTP-GAPSPGGYN-----PHTPGSNIDQ-ASNDWVTTDIMVRV 758
Query: 198 NENARDPEFRGQIGVIRHLGSGVCSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEH 257
+ D Q G+IR + G+CSV+L + E+ +SI + LEPV P N+KVKVI+GE
Sbjct: 759 KDTFLDGGVINQTGIIRSVTGGMCSVFLQDTEKVVSISSEHLEPVTPTKNNKVKVILGED 818
Query: 258 KECTGVLLSVDNGEGVVKLTEEDDVKMIDVKFLCKYK 294
+E TGVLLS+D +G+V++ ++ +K+++++FL K +
Sbjct: 819 REATGVLLSIDGEDGIVRMELDEQLKILNLRFLGKLE 855
>gi|170033230|ref|XP_001844481.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167873888|gb|EDS37271.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 1046
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 132/400 (33%), Positives = 173/400 (43%), Gaps = 134/400 (33%)
Query: 4 GFMSPRISSPMHPS---GGRGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK------ 54
GFMSPRI SPMHPS GG G G G G V RD+E++GK+IKITGGPYK
Sbjct: 670 GFMSPRIHSPMHPSGGRGGARGGGRGGGRGGANRVSRDKEILGKSIKITGGPYKGAVGIV 729
Query: 55 ----------------------------VGS-----------RTPG-------GGATPLH 68
VGS RTP G TP++
Sbjct: 730 KDATESTARVELHSSCQTISVDRNHIAVVGSTPKEGSVSSYIRTPSRTPSGSYGAQTPVY 789
Query: 69 DGSRTP--------------------------------GPWDP--SSTPARSIHNDAYPM 94
GS+TP G WDP ++TPARS D + M
Sbjct: 790 SGSKTPLHGSQTPSYDVGNRTPYGSMTPSHDGSMTPRHGAWDPAVTNTPARSNDFD-FNM 848
Query: 95 DD--------------SFNNSY-PHTPGTMYGSSSEHTSYSPLQASPSPSGYQSHSGVSS 139
++ N + PHTPG M+ + + S
Sbjct: 849 EEPSPSPGYNPSTPGYQINTPFAPHTPGNMFNTENYSPYQP-----------SPSPSPSP 897
Query: 140 GSSSYLGATPSPS--SEAAPYGTPSPLSYSSRQASPFTPGTGLD-QYPTPEWHTTDIEVR 196
+Y+G TPSPS S A P SP +P TPG LD Q+ EW TTDIEV
Sbjct: 898 YQVNYMG-TPSPSGYSPATPGAPQSPY-------NPQTPGASLDSQF--GEWCTTDIEVE 947
Query: 197 INENARDPEFRGQIGVIRHLGSGVCSVYLAEEERTLSIEAHELEPVMPQ-PNDKVKVIVG 255
I N D + GQ G IR + SG CSV+L EE+R +++ ++ LEPV+P D+ KVI G
Sbjct: 948 I-RNHDDSDLAGQTGFIRTVTSGACSVFLPEEDRVVTVLSNNLEPVVPTVAGDRFKVIFG 1006
Query: 256 EHKECTGVLLSV-DNGEGVVKLTEEDDVKMIDVKFLCKYK 294
+ +E G LS+ N E +V + + K++ + +LCK K
Sbjct: 1007 DERETLGEFLSLSSNKEAIVSINGKK--KLLPLNYLCKVK 1044
>gi|195431569|ref|XP_002063809.1| GK15869 [Drosophila willistoni]
gi|194159894|gb|EDW74795.1| GK15869 [Drosophila willistoni]
Length = 1082
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/262 (37%), Positives = 132/262 (50%), Gaps = 48/262 (18%)
Query: 57 SRTPGGGATPLHDGSRTP--GPWDPSS--TPARSIHND-----------------AYPMD 95
+RTP G TP HDGS TP G WDP++ TPAR+ D Y M
Sbjct: 842 TRTPYGTMTPSHDGSMTPRHGAWDPTANTTPARNADFDYSLEEPSPSPGYNPSTPGYQMT 901
Query: 96 DSFNNSYPHTPGTMYGSSSEHTSYSPLQASPSPS---GYQSHSGVSSGSSSYLGATPSPS 152
F P TPGT+YGS ++ ++P + GY + TPSPS
Sbjct: 902 SQF---APQTPGTLYGSDRSYSPFNPSPSPAPSPFPVGYMN--------------TPSPS 944
Query: 153 SEAAPYGTPSPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGV 212
+ Y +P +P TPG LD +W TTDIEVRI+ + D + GQ GV
Sbjct: 945 T----YSPNTPGGIPQSPYNPQTPGASLDS-SMGDWCTTDIEVRIHTHD-DTDLVGQTGV 998
Query: 213 IRHLGSGVCSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEG 272
IR + +GVCSV+L +E+R++SI + L PV P D+ KVI GE +E G +LS G+
Sbjct: 999 IRTVSNGVCSVFLRQEDRSVSIVSEHLAPVPPNSGDEFKVIYGEDRESVGKVLSKQEGD- 1057
Query: 273 VVKLTEEDDVKMIDVKFLCKYK 294
V+ D+VKMI + LCK K
Sbjct: 1058 VLVCKVNDEVKMIPINHLCKMK 1079
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 50/75 (66%), Gaps = 5/75 (6%)
Query: 4 GFMSPRISSPMHPSGGRGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK-----VGSR 58
GFMSPRI SPMHPSGGRGGRGG RGG G V RDRE++GKTIKI+GGPYK V
Sbjct: 707 GFMSPRIQSPMHPSGGRGGRGGARGGRGGFRVTRDREILGKTIKISGGPYKGAVGIVKDA 766
Query: 59 TPGGGATPLHDGSRT 73
T LH +T
Sbjct: 767 TESTARVELHTSCQT 781
>gi|195487144|ref|XP_002091785.1| GE12049 [Drosophila yakuba]
gi|194177886|gb|EDW91497.1| GE12049 [Drosophila yakuba]
Length = 1079
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/266 (37%), Positives = 133/266 (50%), Gaps = 48/266 (18%)
Query: 53 YKVGSRTPGGGATPLHDGSRTP--GPWDPS--STPARSIHND-----------------A 91
+ +RTP G TP HDGS TP G WDP+ +TPAR+ D
Sbjct: 835 WDTDTRTPYGTMTPSHDGSMTPRHGAWDPTANTTPARNNDFDYSLEEPSPSPGYNPSTPG 894
Query: 92 YPMDDSFNNSYPHTPGTMYGSSSEHTSYSPLQASPSPS---GYQSHSGVSSGSSSYLGAT 148
Y M F P TPGT+YGS ++ ++P + GY + T
Sbjct: 895 YQMSSQF---APQTPGTLYGSDRSYSPFNPSPSPAPSPYPVGYMN--------------T 937
Query: 149 PSPSSEAAPYGTPSPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRG 208
PSPS+ Y +P +P TPG LD +W TTDIEVRI+ + D + G
Sbjct: 938 PSPST----YSPNTPGGIPQSPYNPQTPGASLDS-SMGDWCTTDIEVRIHTHD-DTDLVG 991
Query: 209 QIGVIRHLGSGVCSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVD 268
Q G+IR + +GVCSV+L +E+R++SI + L PV P D+ KVI GE +E G +LS
Sbjct: 992 QTGIIRTVSNGVCSVFLRQEDRSVSIVSEHLAPVPPNSGDEFKVIYGEERESVGRVLSKQ 1051
Query: 269 NGEGVVKLTEEDDVKMIDVKFLCKYK 294
G+ V+ D+VKMI V LCK K
Sbjct: 1052 EGD-VLVCKINDEVKMIPVNHLCKMK 1076
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 49/75 (65%), Gaps = 5/75 (6%)
Query: 4 GFMSPRISSPMHPSGGRGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK-----VGSR 58
GFMSPRI SPMHPSGGRG RGG RGG G V RDRE++GKTIKI+GGPYK V
Sbjct: 704 GFMSPRIQSPMHPSGGRGARGGARGGRGGFRVTRDREILGKTIKISGGPYKGAVGIVKDA 763
Query: 59 TPGGGATPLHDGSRT 73
T LH +T
Sbjct: 764 TESTARVELHTSCQT 778
>gi|195122796|ref|XP_002005897.1| GI20728 [Drosophila mojavensis]
gi|193910965|gb|EDW09832.1| GI20728 [Drosophila mojavensis]
Length = 1087
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/266 (36%), Positives = 133/266 (50%), Gaps = 48/266 (18%)
Query: 53 YKVGSRTPGGGATPLHDGSRTP--GPWDPSS--TPARSIHND-----------------A 91
+ +RTP G TP HDGS TP G WDP++ TPAR+ D
Sbjct: 843 WDTDTRTPYGTMTPSHDGSMTPRHGAWDPTANTTPARNTDFDYSLEEPSPSPGYNPSTPG 902
Query: 92 YPMDDSFNNSYPHTPGTMYGSSSEHTSYSPLQASPSPS---GYQSHSGVSSGSSSYLGAT 148
Y M F P TPGT+YGS ++ ++P + GY + T
Sbjct: 903 YQMSSQF---APQTPGTLYGSDRSYSPFNPSPSPAPSPYPVGYMN--------------T 945
Query: 149 PSPSSEAAPYGTPSPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRG 208
PSPS+ Y +P +P TPG LD +W TTDIEVRI+ + D + G
Sbjct: 946 PSPST----YSPNTPGGVPQSPYNPQTPGASLDS-TMGDWCTTDIEVRIHTHD-DTDLVG 999
Query: 209 QIGVIRHLGSGVCSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVD 268
Q G+IR + +GVCSV+L +E+R++SI + L PV P D+ KVI GE +E G +LS
Sbjct: 1000 QTGIIRTVSNGVCSVFLRQEDRSVSIVSEHLAPVPPNSGDEFKVIYGEERESVGKVLSKQ 1059
Query: 269 NGEGVVKLTEEDDVKMIDVKFLCKYK 294
G+ V+ D+VKM+ V LCK K
Sbjct: 1060 EGD-VLVCKINDEVKMLPVNHLCKMK 1084
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 48/75 (64%), Gaps = 5/75 (6%)
Query: 4 GFMSPRISSPMHPSGGRGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK-----VGSR 58
GFMSPRI SPMHPSGGRG RGG RGG G V RDREL+GKTIKI GGPYK V
Sbjct: 712 GFMSPRIQSPMHPSGGRGARGGSRGGRGGFRVTRDRELLGKTIKICGGPYKGAVGIVKDA 771
Query: 59 TPGGGATPLHDGSRT 73
T LH +T
Sbjct: 772 TESTARVELHTSCQT 786
>gi|194881346|ref|XP_001974809.1| GG21970 [Drosophila erecta]
gi|190657996|gb|EDV55209.1| GG21970 [Drosophila erecta]
Length = 1078
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 99/266 (37%), Positives = 133/266 (50%), Gaps = 48/266 (18%)
Query: 53 YKVGSRTPGGGATPLHDGSRTP--GPWDPSS--TPARSIHND-----------------A 91
+ +RTP G TP HDGS TP G WDP++ TPAR+ D
Sbjct: 834 WDTDTRTPYGTMTPSHDGSMTPRHGAWDPTANTTPARNNDFDYSLEEPSPSPGYNPSTPG 893
Query: 92 YPMDDSFNNSYPHTPGTMYGSSSEHTSYSPLQASPSPS---GYQSHSGVSSGSSSYLGAT 148
Y M F P TPGT+YGS ++ ++P + GY + T
Sbjct: 894 YQMTSQF---APQTPGTLYGSDRSYSPFNPSPSPAPSPYPVGYMN--------------T 936
Query: 149 PSPSSEAAPYGTPSPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRG 208
PSPS+ Y +P +P TPG LD +W TTDIEVRI+ + D + G
Sbjct: 937 PSPST----YSPNTPGGIPQSPYNPQTPGASLDS-SMGDWCTTDIEVRIHTHD-DTDLVG 990
Query: 209 QIGVIRHLGSGVCSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVD 268
Q G+IR + +GVCSV+L +E+R++SI + L PV P D+ KVI GE +E G +LS
Sbjct: 991 QTGIIRTVSNGVCSVFLRQEDRSVSIVSEHLAPVPPNSGDEFKVIYGEERESVGRVLSKQ 1050
Query: 269 NGEGVVKLTEEDDVKMIDVKFLCKYK 294
G+ V+ D+VKMI V LCK K
Sbjct: 1051 EGD-VLVCKINDEVKMIPVNHLCKMK 1075
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 49/75 (65%), Gaps = 5/75 (6%)
Query: 4 GFMSPRISSPMHPSGGRGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK-----VGSR 58
GFMSPRI SPMHPSGGRG RGG RGG G V RDRE++GKTIKI+GGPYK V
Sbjct: 703 GFMSPRIQSPMHPSGGRGARGGARGGRGGFRVTRDREILGKTIKISGGPYKGSVGIVKDA 762
Query: 59 TPGGGATPLHDGSRT 73
T LH +T
Sbjct: 763 TESTARVELHTSCQT 777
>gi|194753156|ref|XP_001958883.1| GF12341 [Drosophila ananassae]
gi|190620181|gb|EDV35705.1| GF12341 [Drosophila ananassae]
Length = 1081
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 98/266 (36%), Positives = 133/266 (50%), Gaps = 48/266 (18%)
Query: 53 YKVGSRTPGGGATPLHDGSRTP--GPWDPSS--TPARSIHND-----------------A 91
+ +RTP G TP HDGS TP G WDP++ TPAR+ D
Sbjct: 837 WDTDTRTPYGTMTPSHDGSMTPRHGAWDPTANTTPARNNEFDYSLEEPSPSPGYNPSTPG 896
Query: 92 YPMDDSFNNSYPHTPGTMYGSSSEHTSYSPLQASPSPS---GYQSHSGVSSGSSSYLGAT 148
Y M F P TPGT+YGS ++ ++P + GY + T
Sbjct: 897 YQMTSQF---APQTPGTLYGSDRSYSPFNPSPSPAPSPYPVGYMN--------------T 939
Query: 149 PSPSSEAAPYGTPSPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRG 208
PSPS+ Y +P +P TPG LD +W TTDIEVRI+ + D + G
Sbjct: 940 PSPST----YSPNTPGGIPQSPYNPQTPGASLDS-SMGDWCTTDIEVRIHTHD-DTDLVG 993
Query: 209 QIGVIRHLGSGVCSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVD 268
Q G+IR + +GVCSV+L +E+R++SI + L PV P D+ KVI GE +E G +L+
Sbjct: 994 QTGIIRTVSNGVCSVFLRQEDRSVSIVSEHLAPVPPNSGDEFKVIYGEERESVGRVLAKQ 1053
Query: 269 NGEGVVKLTEEDDVKMIDVKFLCKYK 294
G+ V+ D+VKMI V LCK K
Sbjct: 1054 EGD-VLVCKINDEVKMIPVNHLCKMK 1078
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 49/75 (65%), Gaps = 5/75 (6%)
Query: 4 GFMSPRISSPMHPSGGRGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK-----VGSR 58
GFMSPRI SPMHPSGGRG RGG RGG G V RDRE++GKTIKI+GGPYK V
Sbjct: 706 GFMSPRIQSPMHPSGGRGARGGARGGRGGFRVTRDREILGKTIKISGGPYKGAVGIVKDA 765
Query: 59 TPGGGATPLHDGSRT 73
T LH +T
Sbjct: 766 TESTARVELHTSCQT 780
>gi|47196177|emb|CAF88423.1| unnamed protein product [Tetraodon nigroviridis]
Length = 143
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 101/152 (66%), Gaps = 13/152 (8%)
Query: 147 ATPSPS----SEAAPYGTPSPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENAR 202
A+PSPS S P G PSP Y+ P TPG+ ++Q + +W TTDI VR+ ++
Sbjct: 1 ASPSPSPVGYSPMTP-GAPSPGGYN-----PHTPGSNIEQ-GSSDWVTTDILVRVKDSFM 53
Query: 203 DPEFRGQIGVIRHLGSGVCSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTG 262
D GQ+GVIR + G+CSV++ E E+ +SI + LEPV P N+KVKVI+GE +E TG
Sbjct: 54 D--LMGQMGVIRSVTGGMCSVFMQESEKVVSISSDHLEPVTPTKNNKVKVIMGEDREATG 111
Query: 263 VLLSVDNGEGVVKLTEEDDVKMIDVKFLCKYK 294
+LLS+D +G+V++ +D +K+++++FL + +
Sbjct: 112 ILLSIDGDDGIVRMELDDQLKILNLRFLGRLE 143
>gi|432105213|gb|ELK31569.1| Transcription elongation factor SPT5 [Myotis davidii]
Length = 279
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/236 (36%), Positives = 129/236 (54%), Gaps = 25/236 (10%)
Query: 72 RTPGPWDPSSTPARSIHNDAYPMDDSFNNSYPHTPGTMYGSSSEHTSYSPL-------QA 124
+TPG DPSS +N P + N+ P Y S S +Y P Q
Sbjct: 50 QTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFFP---YASPSPQGTYQPSPSPQSYHQV 106
Query: 125 SPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGTPSPLSYSSRQASPFTP 176
SPSP+GYQ +HS S + S A PSPS S P G PSP Y+ P P
Sbjct: 107 SPSPAGYQNTHSPASYHPTPSPMAYQARPSPSPVGYSPMTP-GAPSPGGYN-----PHRP 160
Query: 177 GTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGVCSVYLAEEERTLSIEA 236
G+G++Q + +W TTDI+V++ + D + G GVI + G+CSVY + E+ +SI +
Sbjct: 161 GSGIEQNFS-DWVTTDIQVKVRDTYLDTQVVGLTGVICSVMGGMCSVYPKDREKVVSIFS 219
Query: 237 HELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEEDDVKMIDVKFLCK 292
LEP+ P N+KVKVI+GE +E GVLLS++ +G++ + ++ K+++++FL K
Sbjct: 220 EHLEPITPTKNNKVKVILGEDREAKGVLLSINGEDGIIHMDLDEQFKILNLRFLGK 275
>gi|313244795|emb|CBY15499.1| unnamed protein product [Oikopleura dioica]
Length = 926
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/287 (33%), Positives = 141/287 (49%), Gaps = 52/287 (18%)
Query: 56 GSRTPGGGA-TPLHDGSRTPGPWDPSSTPA---------------RSIHNDAYPMDDSFN 99
GSRTP GA TP DGSRTP WD TP + N P DD F
Sbjct: 635 GSRTPAYGASTPRADGSRTPSQWDGGRTPQYDGSRTPRGGENPWNSKVAN--TPRDDGFG 692
Query: 100 NSY--PHTPGTMYGSSSEHTSYSPLQASPSPSGYQS--------------HSGVSSGSSS 143
+S+ P TPGT Y S + SP A +PS QS +S + S +
Sbjct: 693 DSFDTPGTPGTPYESRQSDYAPSPQYAPQTPSYDQSSTPYSMNPSPSPGPYSDTITPSPA 752
Query: 144 YLGATPSPS-----SEAAPYG-TPSPLSY-SSRQASPFTP-----------GTGLDQYPT 185
Y A P+PS ++ + Y TPSP Y +S + FTP G G
Sbjct: 753 YGSAGPTPSPGYFVNKKSIYKPTPSPGGYDASPSPNAFTPMNYSPGMSPMFGQGDGNINN 812
Query: 186 PEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGVCSVYLAEEERTLSIEAHELEPVMPQ 245
+WH+ DIEV I ++ D RG+ G+I+ + V SV++ + ++T+S+ L P+ PQ
Sbjct: 813 VDWHSEDIEVSIKDSHDDASHRGKTGIIKTISGHVSSVWVPDLDQTVSVGNDNLSPIQPQ 872
Query: 246 PNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEEDDVKMIDVKFLCK 292
N KVKV+ G+ + TG L+S+D +G+V++ + +K++ +KFL K
Sbjct: 873 KNHKVKVLHGDDQGHTGELISIDGNDGIVRMDADQQLKILQLKFLGK 919
>gi|339237199|ref|XP_003380154.1| transcription elongation factor SPT5 [Trichinella spiralis]
gi|316977067|gb|EFV60230.1| transcription elongation factor SPT5 [Trichinella spiralis]
Length = 915
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 88/269 (32%), Positives = 139/269 (51%), Gaps = 35/269 (13%)
Query: 52 PYKVGSRTPG-GGATPLHDGSRTP---GPWDPS--STPARS-IHNDAYPMDDSFNNSY-- 102
P G RTP G TP+HDGSRTP WDP+ +TPAR I +D + + S Y
Sbjct: 651 PMHEGGRTPYYGSQTPMHDGSRTPSHANAWDPTVPNTPARRGIPDDDFEYEASPVTKYGG 710
Query: 103 -------------------PHTPGTMYGSSSEHTSYSPLQASPSPSGYQSHSGVSSGSSS 143
P+TPG ++ SE++S +Q++ SP S++G S G S
Sbjct: 711 PASVSPATPGYSVDTPLGVPYTPGDLF---SENSSPFLMQSANSPL-LGSYAGSSVGESP 766
Query: 144 YLGATPSPSSEAAPYGTPSPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARD 203
L + S S + G+ + LS S + +P D EW ++EV I + D
Sbjct: 767 SLQPSTSGLSLFST-GSRTSLSTPSSSITSDSPKLSFDG-NLGEWVEPNMEVVIRDYPVD 824
Query: 204 PEFRGQIGVIRHLGSGVCSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGV 263
G++GV++ + C++++ E+ +S+ LEP P DKVK+I GE + TG+
Sbjct: 825 RMLNGRVGVVQAVTGDSCTIFIPSLEKAVSVYVEHLEPSKPLQGDKVKIIRGEDVDSTGL 884
Query: 264 LLSVDNGEGVVKLTEEDDVKMIDVKFLCK 292
++S+D EGVVK T+ D+++++++ FLCK
Sbjct: 885 VISIDGVEGVVK-TDSDEIRLVNMAFLCK 912
>gi|393909583|gb|EJD75507.1| micro-fibrillar-associated protein 1 containing protein [Loa loa]
Length = 1069
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/256 (32%), Positives = 125/256 (48%), Gaps = 39/256 (15%)
Query: 52 PYKVGSRTPGGGA-TPLHDGSRTP---GPWDPSSTPARSIHNDAYPMDDSFNNSYPHTPG 107
P G RTP GA TP +DG RTP WDPS+TPA +P+ D + P +P
Sbjct: 838 PMHEGGRTPHYGALTPSYDGGRTPVHSSAWDPSTTPA-------HPISDDIHYDEPSSPF 890
Query: 108 TMYGSSSEHTSYSPLQASPSPSGYQSHS-GVSSGSSSYLGATPSPSS---EAAPYGTPSP 163
+ P+P H+ G + SS LG T +P + A Y PSP
Sbjct: 891 NV----------------PTPGAMNPHTPGYNPDSS--LGQTYAPMTPGGMYADYAAPSP 932
Query: 164 LSYSSRQASPFTPGTG-LDQYPTP--EWHTTDIEVRINENARDPEFRGQIGVIRHLGS-- 218
S G+G + Q+ +W + D+ VR +N D E +GQ G I+++ +
Sbjct: 933 FSDGRSNTGATAAGSGAIPQHVLNSGDWVSVDMMVRFRDNYDDDELKGQEGTIKNVDTVE 992
Query: 219 GVCSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTE 278
G CS+Y E +R + ++ PV PQ D+ K+I G+ +G L+SVDN E VVK T+
Sbjct: 993 GRCSIYSFELDREVMAYFDQILPVKPQQGDRAKIIYGDDIGISGTLVSVDNTEAVVK-TD 1051
Query: 279 EDDVKMIDVKFLCKYK 294
+D+ + ++ LC+ +
Sbjct: 1052 NNDIVLSHIESLCRME 1067
>gi|402591185|gb|EJW85115.1| hypothetical protein WUBG_03973 [Wuchereria bancrofti]
Length = 1052
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/252 (34%), Positives = 123/252 (48%), Gaps = 31/252 (12%)
Query: 52 PYKVGSRTPGGGA-TPLHDGSRTP---GPWDPSSTPARSIHNDAYPMDDSFNNSYPHTPG 107
P G RTP GA TP +DG RTP WDPS+TPA I +D + + S + P TPG
Sbjct: 821 PMHEGGRTPHYGALTPSYDGGRTPVHSSAWDPSTTPAHPISDDIHYDEPSSPFNVP-TPG 879
Query: 108 TMYGSSSEHTSYSPLQASPSPSGYQSHSGVSSGSSSYLGATPSPSSEAAPYGTPSPLSY- 166
M +P GY S + SY A +P A Y PSP S
Sbjct: 880 AM---------------NPHTPGYNPDSSLGQ---SY--APMTPGGMYADYAAPSPFSDG 919
Query: 167 SSRQASPFTPGTGLDQYPTP--EWHTTDIEVRINENARDPEFRGQIGVIRHLGS--GVCS 222
S + Q+ EW + D+ VR +N D E +GQ G I+++ S G CS
Sbjct: 920 RSNTGGAAAGSGAIPQHVLNSGEWVSVDMMVRFRDNYDDDELKGQEGTIKNVDSVEGRCS 979
Query: 223 VYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEEDDV 282
+Y E +R ++ ++ PV PQ D+ K+I G+ +G L+SVDN E VVK T+ +D+
Sbjct: 980 IYSFELDREVTAYFDQILPVKPQQGDRAKIIYGDDIGISGTLVSVDNTEAVVK-TDNNDI 1038
Query: 283 KMIDVKFLCKYK 294
+ ++ LC+ +
Sbjct: 1039 VLSHIESLCRME 1050
>gi|312065458|ref|XP_003135800.1| hypothetical protein LOAG_00212 [Loa loa]
Length = 1409
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/256 (32%), Positives = 125/256 (48%), Gaps = 39/256 (15%)
Query: 52 PYKVGSRTPGGGA-TPLHDGSRTP---GPWDPSSTPARSIHNDAYPMDDSFNNSYPHTPG 107
P G RTP GA TP +DG RTP WDPS+TPA +P+ D + P +P
Sbjct: 1178 PMHEGGRTPHYGALTPSYDGGRTPVHSSAWDPSTTPA-------HPISDDIHYDEPSSPF 1230
Query: 108 TMYGSSSEHTSYSPLQASPSPSGYQSHS-GVSSGSSSYLGATPSPSS---EAAPYGTPSP 163
+ P+P H+ G + SS LG T +P + A Y PSP
Sbjct: 1231 NV----------------PTPGAMNPHTPGYNPDSS--LGQTYAPMTPGGMYADYAAPSP 1272
Query: 164 LSYSSRQASPFTPGTG-LDQYPTP--EWHTTDIEVRINENARDPEFRGQIGVIRHLGS-- 218
S G+G + Q+ +W + D+ VR +N D E +GQ G I+++ +
Sbjct: 1273 FSDGRSNTGATAAGSGAIPQHVLNSGDWVSVDMMVRFRDNYDDDELKGQEGTIKNVDTVE 1332
Query: 219 GVCSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTE 278
G CS+Y E +R + ++ PV PQ D+ K+I G+ +G L+SVDN E VVK T+
Sbjct: 1333 GRCSIYSFELDREVMAYFDQILPVKPQQGDRAKIIYGDDIGISGTLVSVDNTEAVVK-TD 1391
Query: 279 EDDVKMIDVKFLCKYK 294
+D+ + ++ LC+ +
Sbjct: 1392 NNDIVLSHIESLCRME 1407
>gi|391330049|ref|XP_003739477.1| PREDICTED: transcription elongation factor SPT5-like [Metaseiulus
occidentalis]
Length = 1046
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/253 (36%), Positives = 124/253 (49%), Gaps = 38/253 (15%)
Query: 53 YKVGSRTPG-GGATPLHDGSRTPG---PWDPSSTPARSIHNDAYPMDDS--FNNSYPHTP 106
Y+ GSRTP G TP HDGSRTP WD STPARS D Y + S +N P TP
Sbjct: 801 YEPGSRTPHYGNETPRHDGSRTPSHSTSWDHVSTPARSEEFDEYEHEPSPSYN---PATP 857
Query: 107 GTMYGSSSEHTSYSPLQASPSPSG-YQSHSG---VSSGSSSYLGATPSPSSEAAPYGTPS 162
G + ++P +P G Y SH S S ++ S P TPS
Sbjct: 858 GYQPDTPQVGGPFTP----QTPGGMYSSHEAPFSPYQASPSPSSSSYQLPSPGNPLTTPS 913
Query: 163 PLSYSS------------RQASPF----TPGTGLDQYPTPEWHTTDIEVRIN--ENARDP 204
P+ Y++ ASPF TPG G+D P EW D+E RI EN +D
Sbjct: 914 PMGYNNPNSQFFSPMTPGVAASPFNNPQTPGGGMDHMPM-EWQAVDLECRIRALEN-KDK 971
Query: 205 EFRGQIGVIRHLGSGVCSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVL 264
GQ +I + VCSV L +E+R +S+++H LEPV P+ N++ K I+ E E G+
Sbjct: 972 GLVGQQCIITGISGNVCSVLLIKEDRVISVDSHYLEPVRPRENERCK-IISEGGEEEGIA 1030
Query: 265 LSVDNGEGVVKLT 277
V+ G V+ ++
Sbjct: 1031 AGVNTGTSVIVVS 1043
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 62/143 (43%), Gaps = 19/143 (13%)
Query: 3 GGF--MSPRISSPMHPSGGRGGRGGGRG--------GHHGGNVRRDRELIGKTIKITGGP 52
GGF +SPRISSPMHPS G+ R +RD LIGKTIKI GP
Sbjct: 659 GGFSPLSPRISSPMHPSAE--GKSPMRSPMHAGGHGRGGAHQGKRDFHLIGKTIKIIKGP 716
Query: 53 YK-----VGSRTPGGGATPLHDGSRTPGPWDPSSTPARSIHNDAYPMDDSFNNSYPHTPG 107
YK V T LH +T PA + A S+ + H
Sbjct: 717 YKGHIGMVKDATTSTARVELHAKCQTITVDRTRLEPATKVSGRASGGASSYTRTPSHGNA 776
Query: 108 T-MYGSSS-EHTSYSPLQASPSP 128
T MYG+ + H S +P+Q S +P
Sbjct: 777 TPMYGNQTPIHGSRTPMQGSQTP 799
>gi|324499705|gb|ADY39881.1| Transcription elongation factor SPT5 [Ascaris suum]
Length = 1223
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 129/257 (50%), Gaps = 31/257 (12%)
Query: 52 PYKVGSRTPGGGA-TPLHDGSRTP----GPWDPSSTPARSIHNDAYPMDDSFNNSYPHTP 106
P G RTP GA TP ++G RTP WDP+ T + A+PM+D P +P
Sbjct: 978 PMHEGGRTPHYGASTPAYEGGRTPIHSSSAWDPAVT-----NTPAHPMNDDIQYDEPDSP 1032
Query: 107 GTMY--GSSSEHT-SYSPLQASPSPSGYQSHSGVSSGSSSYLGATPSPSSEAAPYGTPSP 163
+ GS + T Y+P +P G QS++ ++ G PSP S + Y + +P
Sbjct: 1033 FNVPTPGSLNPQTPGYNP----DTPMG-QSYTPMTPGGMYADYTAPSPYSRSNNYDSAAP 1087
Query: 164 LSYSSRQASPFTPG----TGLDQYPTP--EWHTTDIEVRINENARDPEFRGQIGVIR--H 215
YSS Q+ +TP G+ Q+ EW D+ +R N D E R Q G +R
Sbjct: 1088 --YSSAQS--YTPAGGAPAGIPQHVLNSGEWLAADMIIRFRGNYEDEELRDQEGTVRSVD 1143
Query: 216 LGSGVCSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVK 275
L G C++Y E++R + ++ PV PQ D+VKVI G+ G L+SVD E V+K
Sbjct: 1144 LAEGRCTIYSFEQDREVRAYFDQILPVKPQQGDRVKVIHGDDNGVIGTLVSVDGTEAVIK 1203
Query: 276 LTEEDDVKMIDVKFLCK 292
T+ +D+ + ++ LC+
Sbjct: 1204 -TDSNDIVLSHIESLCR 1219
>gi|170580854|ref|XP_001895436.1| Micro-fibrillar-associated protein 1 C-terminus containing protein
[Brugia malayi]
gi|158597624|gb|EDP35722.1| Micro-fibrillar-associated protein 1 C-terminus containing protein
[Brugia malayi]
Length = 1533
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 85/254 (33%), Positives = 123/254 (48%), Gaps = 27/254 (10%)
Query: 52 PYKVGSRTPGGGA-TPLHDGSRTP---GPWDPSSTPARSIHNDAYPMDDS--FN-----N 100
P G RTP GA TP +DG RTP WDPS+TPA I +D + + S FN
Sbjct: 846 PMHEGGRTPHYGALTPSYDGGRTPVHSSAWDPSTTPAHPISDDIHYDEPSSPFNVPTPGA 905
Query: 101 SYPHTPGTMYGSSSEHTSYSPLQASPSPSGYQSHSGVSSGSSSYLGATP-------SPSS 153
PHTPG SS Y + + + V+S S+Y+ +P
Sbjct: 906 MNPHTPGYNPDSSLGKICYFKISFAMD---FGELLKVNSSVSTYVRIVAGQSYAPMTPGG 962
Query: 154 EAAPYGTPSPLSYSSRQASPFTPGTG-LDQYPTP--EWHTTDIEVRINENARDPEFRGQI 210
A Y PSP S S G+G + Q+ EW + D+ VR ++ D E +GQ
Sbjct: 963 MYADYAAPSPFSDGRSNTSGAVTGSGAIPQHVLNSGEWVSVDMMVRFRDSYDDDELKGQE 1022
Query: 211 GVIRHLGS--GVCSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVD 268
G ++++ + G CS+Y E +R + ++ PV PQ D+ K+I G+ +G L+SVD
Sbjct: 1023 GTVKNVDNVEGRCSIYSFELDREVMAYFDQILPVKPQQGDRAKIIYGDDIGISGTLVSVD 1082
Query: 269 NGEGVVKLTEEDDV 282
N E VVK T+ +D+
Sbjct: 1083 NTEAVVK-TDNNDI 1095
>gi|5731756|emb|CAB52557.1| putative protein [Arabidopsis thaliana]
gi|7267476|emb|CAB77960.1| putative protein [Arabidopsis thaliana]
Length = 1054
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/248 (33%), Positives = 120/248 (48%), Gaps = 24/248 (9%)
Query: 63 GATPLHDGSRTP---GPWDPSS--TPARSIHNDAYPMDDSFNNSYPHTPGTMYGSSSEHT 117
GATP+HDG RTP W+P + +P R D P S+ S + PG+ + E
Sbjct: 811 GATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNP--GSWGTSPQYQPGSPPSRAYEAP 868
Query: 118 SYSPLQASPSPSGYQSHSGVSSGSSSYLGATPSPSSEAAPYG--TPSPLSY--SSRQASP 173
+ AS +P G S +G S PSP + P TPS SY + P
Sbjct: 869 TPGSGWAS-TPGGSYSDAGTPRDHGSAYANAPSPYLPSTPGQPMTPSSASYLPGTPGGQP 927
Query: 174 FTPGTGLDQY------PTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGVCSVYLAE 227
TPGTGLD W DI V I++ D + +GVIR + G C V L
Sbjct: 928 MTPGTGLDVMSPVIGGDAEAWFMPDILVDIHKAGEDTD----VGVIRDVSDGTCKVSLGS 983
Query: 228 --EERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEEDDVKMI 285
E T+ ELE + P+ +D+VK++ G+++ TG L+ +D +G+VK+ + DVK++
Sbjct: 984 SGEGDTIMALPSELEIIPPRKSDRVKIVGGQYRGSTGKLIGIDGSDGIVKIDDNLDVKIL 1043
Query: 286 DVKFLCKY 293
D+ L K+
Sbjct: 1044 DLALLAKF 1051
>gi|334186403|ref|NP_192575.3| global transcription factor group A2 [Arabidopsis thaliana]
gi|374095445|sp|Q9STN3.2|SPT51_ARATH RecName: Full=Putative transcription elongation factor SPT5 homolog 1
gi|332657229|gb|AEE82629.1| global transcription factor group A2 [Arabidopsis thaliana]
Length = 1041
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/248 (33%), Positives = 120/248 (48%), Gaps = 24/248 (9%)
Query: 63 GATPLHDGSRTP---GPWDPSS--TPARSIHNDAYPMDDSFNNSYPHTPGTMYGSSSEHT 117
GATP+HDG RTP W+P + +P R D P S+ S + PG+ + E
Sbjct: 798 GATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNP--GSWGTSPQYQPGSPPSRAYEAP 855
Query: 118 SYSPLQASPSPSGYQSHSGVSSGSSSYLGATPSPSSEAAPYG--TPSPLSY--SSRQASP 173
+ AS +P G S +G S PSP + P TPS SY + P
Sbjct: 856 TPGSGWAS-TPGGSYSDAGTPRDHGSAYANAPSPYLPSTPGQPMTPSSASYLPGTPGGQP 914
Query: 174 FTPGTGLDQY------PTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGVCSVYLAE 227
TPGTGLD W DI V I++ D + +GVIR + G C V L
Sbjct: 915 MTPGTGLDVMSPVIGGDAEAWFMPDILVDIHKAGEDTD----VGVIRDVSDGTCKVSLGS 970
Query: 228 --EERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEEDDVKMI 285
E T+ ELE + P+ +D+VK++ G+++ TG L+ +D +G+VK+ + DVK++
Sbjct: 971 SGEGDTIMALPSELEIIPPRKSDRVKIVGGQYRGSTGKLIGIDGSDGIVKIDDNLDVKIL 1030
Query: 286 DVKFLCKY 293
D+ L K+
Sbjct: 1031 DLALLAKF 1038
>gi|297809015|ref|XP_002872391.1| hypothetical protein ARALYDRAFT_327088 [Arabidopsis lyrata subsp.
lyrata]
gi|297318228|gb|EFH48650.1| hypothetical protein ARALYDRAFT_327088 [Arabidopsis lyrata subsp.
lyrata]
Length = 1051
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/248 (32%), Positives = 120/248 (48%), Gaps = 24/248 (9%)
Query: 63 GATPLHDGSRTP---GPWDPSS--TPARSIHNDAYPMDDSFNNSYPHTPGTMYGSSSEHT 117
GATP+HDG RTP W+P + +P R D P S+ S + PG+ + E
Sbjct: 808 GATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNP--GSWGTSPQYQPGSPPSRAYEAP 865
Query: 118 SYSPLQASPSPSGYQSHSGVSSGSSSYLGATPSPSSEAAPYG--TPSPLSY--SSRQASP 173
+ AS +P G S +G S PSP + P TPS SY + P
Sbjct: 866 TPGSGWAS-TPGGSYSDAGTPRDHGSAYANAPSPYLPSTPGQPMTPSSASYLPGTPGGQP 924
Query: 174 FTPGTGLDQY------PTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGVCSVYLAE 227
TPGTGLD W DI V +++ D + +GVIR + G C V L
Sbjct: 925 MTPGTGLDVMSPVIGGDAEAWFMPDILVDVHKAGEDSD----VGVIRDVSDGTCKVSLGS 980
Query: 228 --EERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEEDDVKMI 285
E T+ ELE + P+ +D+VK++ G+++ TG L+ +D +G+VK+ + DVK++
Sbjct: 981 SGEGDTIMALPSELEIIPPRKSDRVKIVGGQYRGSTGKLIGIDGSDGIVKIDDNLDVKIL 1040
Query: 286 DVKFLCKY 293
D+ L K+
Sbjct: 1041 DLALLAKF 1048
>gi|255570428|ref|XP_002526173.1| suppressor of ty, putative [Ricinus communis]
gi|223534550|gb|EEF36249.1| suppressor of ty, putative [Ricinus communis]
Length = 1045
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 86/253 (33%), Positives = 123/253 (48%), Gaps = 28/253 (11%)
Query: 62 GGATPLHDGSRTP---GPWDPSS--TPARSIHNDAYPMDDSFNNSYPHTPGTMYGSSSEH 116
GATP+HDG RTP W+P + +P R D P S+ S + PG+ + E
Sbjct: 797 AGATPIHDGMRTPMRDRAWNPYAPMSPPRDNWEDGNPA--SWGTSPHYQPGSPPSRAYEA 854
Query: 117 TSYSPLQASPSPSGYQSHSGVSSGSSSYLGATPSPSSEAAPYG---TPSPLSY--SSRQA 171
+ A+ +P G S +G SSS PSP + P G TPS +Y +
Sbjct: 855 PTPGSGWAN-TPGGSYSDAGTPRDSSSAYANAPSPYLPSTPGGQPMTPSSAAYLPGTPGG 913
Query: 172 SPFTPGTGLDQYPTPE--------WHTTDIEVRINENARDPEFRGQIGVIRH-LGSGVCS 222
P TPGTG +P W+ DI V + + A D IGVIR L G C
Sbjct: 914 QPMTPGTGGLDVMSPVIGGDNEGPWYMPDILVNVRKAADD----SAIGVIRDVLADGSCR 969
Query: 223 VYLAEEERTLSIEA--HELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEED 280
V L +I A +E+E V+P+ +DK+K++ G H+ TG L+ VD +G+VK+ +
Sbjct: 970 VVLGANGNGETITALPNEIEIVVPRKSDKIKIMGGAHRGATGKLIGVDGTDGIVKVDDTL 1029
Query: 281 DVKMIDVKFLCKY 293
DVK++D+ L K
Sbjct: 1030 DVKILDMVILAKL 1042
>gi|224105299|ref|XP_002313759.1| global transcription factor group [Populus trichocarpa]
gi|222850167|gb|EEE87714.1| global transcription factor group [Populus trichocarpa]
Length = 1042
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 87/256 (33%), Positives = 121/256 (47%), Gaps = 36/256 (14%)
Query: 63 GATPLHDGSRTP---GPWDPSS--TPARSIHNDAYPMDDSFNNSYPHTPGTMYGSSSEHT 117
GATP+HDG RTP W+P + +P R D P S+ +P GS T
Sbjct: 795 GATPIHDGMRTPMRDRAWNPYAPMSPPRDNWEDGNP------GSWGTSPQYQPGSPPSGT 848
Query: 118 SYSPLQAS---PSPSGYQSHSGVSSGSSSYLGATPSPSSEAAPYGTP-SPLSYSSRQASP 173
+P S +P G S +G SSS PSP + P G P +P S S +P
Sbjct: 849 YEAPTPGSGWASTPGGNYSEAGTPRDSSSAYANAPSPYLPSTPGGQPMTPSSASYLPGTP 908
Query: 174 ----FTPGT-GLDQYPTPE--------WHTTDIEVRINENARDPEFRGQIGVIRH-LGSG 219
TPGT GLD +P W DI V ++ A + +GVIR L G
Sbjct: 909 GGQLMTPGTNGLDMM-SPVIGGDGEGPWFIPDILVTVHRTADE----SAVGVIREVLQDG 963
Query: 220 VCSVYLAEEERTLSIEA--HELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLT 277
C + L +I A E+E V+P+ +DK+K++ G H+ TG L+ VD +G+VKL
Sbjct: 964 SCKIVLGAHGNGETITALPSEIEMVVPRKSDKIKILGGAHRGATGKLIGVDGTDGIVKLE 1023
Query: 278 EEDDVKMIDVKFLCKY 293
+ DVK++D+ L K
Sbjct: 1024 DTLDVKILDMVILAKL 1039
>gi|449674715|ref|XP_002160161.2| PREDICTED: transcription elongation factor SPT5-like [Hydra
magnipapillata]
Length = 1005
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 128/279 (45%), Gaps = 57/279 (20%)
Query: 56 GSRTPG-GGATPLHDGSRTPGPWDPSSTPARSIHNDAYPMDDSFNNSY-PHTPGTMYGSS 113
G+RTP GG TPLHD SRTP DPS TP+ N P ++ P P T S
Sbjct: 743 GNRTPNYGGRTPLHDPSRTPS-HDPSRTPSHDQGNRT-PSHVGHGGAWDPTQPNTPARPS 800
Query: 114 SEHTSYSPLQAS------------PSPSGYQS-------HSGVSSGSSSYLGATPSPSSE 154
E+ +Y + AS PS S Y + S V G SSY
Sbjct: 801 DEYENYFDVTASSPGFGNTPSPQTPSHSAYNAPYTPGTPMSNVFGGDSSY---------- 850
Query: 155 AAPYGTPSPLSYSSRQASPFTPGTGL-----------------DQYPTPEWHTTDIEVRI 197
+P TPSP+ +P TPG GL D++ E TDI V++
Sbjct: 851 -SPMHTPSPII-----GNPLTPGAGLMPMSPAYTPNTPRSQFDDEHDHTENLATDIMVKV 904
Query: 198 NENARDPEFRGQIGVIRHLGSGVCSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEH 257
N++ D + + IR + V ++ + + + ++++ ++E V P D+VK++ G
Sbjct: 905 NDDYHDQRYANKRAAIRAIDDDVLTLQMLDTKESITLNNTDVEIVPPVVKDQVKLLAGAD 964
Query: 258 KECTGVLLSVDNGEGVVKLTEEDD-VKMIDVKFLCKYKP 295
K TG L+++D +G++++ ++D +K++ + L Y P
Sbjct: 965 KNYTGELINIDGPDGIIRMDKKDSTLKILQLPHLAIYVP 1003
>gi|340371489|ref|XP_003384278.1| PREDICTED: transcription elongation factor SPT5-like [Amphimedon
queenslandica]
Length = 979
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 93/260 (35%), Positives = 129/260 (49%), Gaps = 39/260 (15%)
Query: 56 GSRTPG----GGATPLHDGSRTP----GPWDPS--STPARSIHNDAYPMDDSFNNSY--P 103
G RTP G TP HD SRTP WDPS +TPAR+ Y S + +Y P
Sbjct: 731 GGRTPSYNNPGYMTPSHDPSRTPLHGGSAWDPSITNTPARTDEWTNYGSAPSPSGTYANP 790
Query: 104 HTPGTM-YGSSSEHTSYSPLQASPSPSGYQSHSGVSSGSSSYLGATPSPSSEAAPYGTPS 162
TPG++ Y + S ++Y + SP QS+S GS TP SS+ TPS
Sbjct: 791 ATPGSVQYDNPSTPSAY--IADSP-----QSNSSSHYGSHYS-ARTPMYSSDYKY--TPS 840
Query: 163 PLSY------SSRQASPFTPGTGLDQ----YPTPEWHTTDIEVRINENARDPEFRGQIGV 212
P +Y S+ + SP TPG+ LD +P DIEV + + D G++GV
Sbjct: 841 PTNYNPMTPGSNLEYSPRTPGSPLDTGDLGFPP------DIEVMVKDLYHDSSLAGKVGV 894
Query: 213 IRHLGSGVCSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEG 272
I+ G SVYL ++ + + I L V P DK+K I G H TG L+++D G+G
Sbjct: 895 IKSAVGGRVSVYLYDDGQDVDIPMSFLTHVPPMKGDKIKCIKGVHTGNTGYLMNIDEGDG 954
Query: 273 VVKLTEEDDVKMIDVKFLCK 292
+VKL + +K+I + L K
Sbjct: 955 IVKLDSDGSLKIITLNELAK 974
>gi|417405599|gb|JAA49507.1| Putative rna polymerase ii transcription elongation factor
dsif/supt5h/spt5 [Desmodus rotundus]
Length = 1016
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 118/356 (33%), Positives = 144/356 (40%), Gaps = 148/356 (41%)
Query: 2 TGGF--MSPRISSPMHPSGG-----RGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYK 54
GGF MSPRISSPMHPS G G GG GG G RRD ELIG+T++I+ GPYK
Sbjct: 659 VGGFAPMSPRISSPMHPSAGGQRGGFGSPGGSSGGMSRGRGRRDNELIGQTVRISQGPYK 718
Query: 55 ----------------------------------VGSRTPGG-----GATP--------- 66
VGSR PGG G TP
Sbjct: 719 GYIGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMY 778
Query: 67 -----------------------------LHDGSRTP---GPWDPS--STPARSIHNDAY 92
LHDGSRTP G WDP+ +TP+R+ Y
Sbjct: 779 GSGSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEY 838
Query: 93 PMDD--------------------------SFNNSY-PHTPGT--MYGSS--------SE 115
DD N Y P TPGT MY + S
Sbjct: 839 AFDDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSP 898
Query: 116 HTSYSPL-------QASPSPSGYQ-SHSGVS---SGSSSYLGATPSPS----SEAAPYGT 160
SY P Q +PSP+GYQ +HS S + S A+PSPS S P G
Sbjct: 899 QGSYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTP-GA 957
Query: 161 PSPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHL 216
PSP Y +P TPG+G++Q + +W TTDI+V++ + D + GQ GVIR +
Sbjct: 958 PSPGGY-----NPHTPGSGIEQN-SSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSV 1007
>gi|428167670|gb|EKX36625.1| hypothetical protein GUITHDRAFT_117170 [Guillardia theta CCMP2712]
Length = 1042
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 129/273 (47%), Gaps = 40/273 (14%)
Query: 53 YKVGSRTPGGG-ATPLHDGSRTPGPWDPSSTPA--RSIHND---AYPMDDS--FNNSYPH 104
++ GS+TP +TP HDGS+TP P+ TP+ R+ + PM DS ++ P
Sbjct: 780 FQAGSQTPAWTPSTPAHDGSQTPNPYAEPGTPSTPRNFFDPNTPGTPMHDSTSWDAGTPA 839
Query: 105 TPGTMYGSSSEHTSYSPLQASPSPSGYQSHSGVSSGSSSYLGATPSPSSEAAPYGTPSPL 164
TPG Y S EH + +P + GY S+ + G+ L T +P A+P+ +P
Sbjct: 840 TPGA-YASPYEHPAATPATPTAY-GGYSSNYVQTPGA---LNPT-TPGEGASPFTPSTPG 893
Query: 165 SYSS---------------RQASPFTPGTGLDQYPT------PEWHTTDIEVRINENARD 203
Y+S Q +P TP T +P W IEVRI
Sbjct: 894 GYASYGYGQGNWQTGQTPFDQGTPQTPATPGGDFPVRAAPQVSNWCLKRIEVRIVSG--- 950
Query: 204 PEFRGQIGVIRHLGSGVCSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGV 263
EF + GV+ + C V + + T+ + A +LE V+PQ N V ++ GE K TG
Sbjct: 951 -EFIDRTGVVVEVKGPDCKVEMQGGQSTM-VPAEDLEAVVPQKNSSVIILQGELKGSTGK 1008
Query: 264 LLSVDNGEGVVKLTEEDDVKMIDVKFLCKYKPE 296
L+ +D +G+VK+ D+K+ID+ L + PE
Sbjct: 1009 LIGIDGRDGIVKMDLNSDIKIIDMPLLAVHVPE 1041
>gi|168038966|ref|XP_001771970.1| RNA polymerase II transcription elongation factor SPT5
[Physcomitrella patens subsp. patens]
gi|162676752|gb|EDQ63231.1| RNA polymerase II transcription elongation factor SPT5
[Physcomitrella patens subsp. patens]
Length = 1044
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/248 (33%), Positives = 122/248 (49%), Gaps = 25/248 (10%)
Query: 64 ATPLHDGSRTPG---PWDPSS--TPARSIH-NDAYPMDDSFNNSYP-HTPGTMYGSSSEH 116
ATP HDG RTP W+P + TP R + +DA P + S P + PGT G S E
Sbjct: 800 ATPSHDGMRTPMRDRAWNPHTPMTPHRGNNWDDANPSTWDTHTSTPQYEPGTPGGRSFEA 859
Query: 117 TSYSPLQASPSPSGYQSHSGV-SSGSSSYLGATPSPSSEAAPYG---TPSPLSY--SSRQ 170
+ ++ +P S +G + + SY A PSP P G TP SY +
Sbjct: 860 PTPGNGWSAQTPGASFSEAGTPTEPAQSY--AAPSPYLPGTPGGPPMTPGVPSYLPGTPG 917
Query: 171 ASPFTPGTGLDQYPTPE---WHTTDIEVRINENARDPEFRGQIGVIRHLG-SGVCSVYL- 225
P TPGTG +P W DI V I + + Q VIR + G C V L
Sbjct: 918 GQPMTPGTGGLDPTSPAIGGWVMPDIVVTIRKLGEET----QTAVIREVMPDGSCRVALG 973
Query: 226 -AEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEEDDVKM 284
+ TL + ++E V+P+ DK+K++ GEH+ CTG L+ +D +G+VKL + D+++
Sbjct: 974 PTGDGDTLLVGQADMELVLPKKTDKIKIVSGEHRGCTGKLMGIDGADGIVKLDDTLDIRI 1033
Query: 285 IDVKFLCK 292
+D+ L K
Sbjct: 1034 LDMSSLSK 1041
>gi|322793927|gb|EFZ17213.1| hypothetical protein SINV_14267 [Solenopsis invicta]
Length = 899
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 104/283 (36%), Positives = 119/283 (42%), Gaps = 121/283 (42%)
Query: 4 GFMSPRISSPMHPSGGRGGRGGGRGGHHGGNVRR-----DRELIGKTIKITGGPYK--VG 56
GFMSPRI+SPMHPSGG GRGGG GG G DRELIG TIKITGGPYK VG
Sbjct: 629 GFMSPRIASPMHPSGGGFGRGGGGGGRGRGRGGGGGARRDRELIGTTIKITGGPYKGNVG 688
Query: 57 -------------------------------------------SRTPGGGA--------- 64
+RTP GA
Sbjct: 689 IVKDATETTARVELHSTCQTISVDRSHIANVGVPTKDGGFSSYNRTPAYGAGGQTPMYAR 748
Query: 65 ----TPLH--------DGSRTP------------------GPWDPS--STPARSIHNDAY 92
TP+H +GSRTP G WDPS +TPAR+ D Y
Sbjct: 749 DGSKTPMHGSQTPMYENGSRTPHYGSMTPSHDGSRTPGQSGAWDPSVTNTPARTNDFDTY 808
Query: 93 PMDDSFNNSY------------PHTPGTMYGSSSEHTSYSPLQASPSPSGYQSHSGVSSG 140
M++ + Y P TPGTMYGS +SY P SPSP+G S +S
Sbjct: 809 SMEEGGSPGYGPGYPPTGGPFTPQTPGTMYGSEQSFSSYQP---SPSPAG----SATASP 861
Query: 141 SSSYLGATPSPS------SEAAPYGTPSPLSYSSRQASPFTPG 177
S + ATPSPS S + TPSP+ Y SP TPG
Sbjct: 862 SPTGYVATPSPSGTGYTTSPHGAFATPSPMGY-----SPMTPG 899
>gi|149056474|gb|EDM07905.1| suppressor of Ty 5 homolog (S. cerevisiae), isoform CRA_c [Rattus
norvegicus]
Length = 78
Score = 80.9 bits (198), Expect = 7e-13, Method: Composition-based stats.
Identities = 35/74 (47%), Positives = 56/74 (75%), Gaps = 1/74 (1%)
Query: 220 VCSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEE 279
+CSVYL + E+ +SI + LEP+ P N+KVKVI+GE +E TGVLLS+D +G++++ E
Sbjct: 1 MCSVYLKDSEKVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIIRMDLE 60
Query: 280 D-DVKMIDVKFLCK 292
D +K+++++FL K
Sbjct: 61 DQQIKILNLRFLGK 74
>gi|359492305|ref|XP_002265283.2| PREDICTED: putative transcription elongation factor SPT5 homolog
1-like isoform 1 [Vitis vinifera]
gi|302142757|emb|CBI19960.3| unnamed protein product [Vitis vinifera]
Length = 1034
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 122/252 (48%), Gaps = 29/252 (11%)
Query: 63 GATPLHDGSRTP---GPWDPSS--TPARSIHNDAYPMDDSFNNSYP-HTPGTMYGSSSEH 116
GATP+HDG RTP W+P + +P R + P DS+ + P + PG+ + E
Sbjct: 788 GATPIHDGMRTPMRDRAWNPYAPMSPPRDNWEEGNP--DSWVTTSPQYQPGSPPSRTYEA 845
Query: 117 TSYSPLQASPSPSGYQSHSGVSSGSSSYLGATPSPSSEAAPYG---TPSPLSY--SSRQA 171
+ AS +P G S +G S+ PSP + P G TP+ +SY +
Sbjct: 846 PTPGSGWAS-TPGGNYSEAGTPRDSTPAYANVPSPYLPSTPGGQPMTPNSVSYLPGTPGG 904
Query: 172 SPFTPGTGLD-------QYPTPEWHTTDIEVRINENARDPEFRGQIGVIRH-LGSGVCSV 223
P TPGTG+D + P W DI V I R P +GVIR L G V
Sbjct: 905 QPMTPGTGVDVMSPIGGEQEGP-WFMPDILVHI----RRPGEENTLGVIREVLPDGTYRV 959
Query: 224 YLAEEE--RTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEEDD 281
L +++ E++ V P+ +DK+K++ G H+ TG L+ VD +G+VK+ + D
Sbjct: 960 GLGSSGGGEIVTVLHAEIDAVAPRKSDKIKIMGGAHRGATGKLIGVDGTDGIVKVDDTLD 1019
Query: 282 VKMIDVKFLCKY 293
VK++D+ L K
Sbjct: 1020 VKILDMVLLAKL 1031
>gi|359492307|ref|XP_003634397.1| PREDICTED: putative transcription elongation factor SPT5 homolog
1-like isoform 2 [Vitis vinifera]
Length = 1044
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 122/252 (48%), Gaps = 29/252 (11%)
Query: 63 GATPLHDGSRTP---GPWDPSS--TPARSIHNDAYPMDDSFNNSYP-HTPGTMYGSSSEH 116
GATP+HDG RTP W+P + +P R + P DS+ + P + PG+ + E
Sbjct: 798 GATPIHDGMRTPMRDRAWNPYAPMSPPRDNWEEGNP--DSWVTTSPQYQPGSPPSRTYEA 855
Query: 117 TSYSPLQASPSPSGYQSHSGVSSGSSSYLGATPSPSSEAAPYG---TPSPLSY--SSRQA 171
+ AS +P G S +G S+ PSP + P G TP+ +SY +
Sbjct: 856 PTPGSGWAS-TPGGNYSEAGTPRDSTPAYANVPSPYLPSTPGGQPMTPNSVSYLPGTPGG 914
Query: 172 SPFTPGTGLD-------QYPTPEWHTTDIEVRINENARDPEFRGQIGVIRH-LGSGVCSV 223
P TPGTG+D + P W DI V I R P +GVIR L G V
Sbjct: 915 QPMTPGTGVDVMSPIGGEQEGP-WFMPDILVHI----RRPGEENTLGVIREVLPDGTYRV 969
Query: 224 YLAEEE--RTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEEDD 281
L +++ E++ V P+ +DK+K++ G H+ TG L+ VD +G+VK+ + D
Sbjct: 970 GLGSSGGGEIVTVLHAEIDAVAPRKSDKIKIMGGAHRGATGKLIGVDGTDGIVKVDDTLD 1029
Query: 282 VKMIDVKFLCKY 293
VK++D+ L K
Sbjct: 1030 VKILDMVLLAKL 1041
>gi|356515975|ref|XP_003526672.1| PREDICTED: putative transcription elongation factor SPT5 homolog
1-like [Glycine max]
Length = 1039
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/263 (33%), Positives = 124/263 (47%), Gaps = 32/263 (12%)
Query: 52 PYKVGSRTPGGGATPLHDGSRTP---GPWDPSS--TPARSIHNDAYPMDDSFNNSYPHTP 106
PY R PG ATP+HDG RTP W+P + +P R D P S+ S + P
Sbjct: 785 PYMTPMRDPG--ATPIHDGMRTPMHSRAWNPYTPMSPPRDNWEDGNP--GSWGASPQYQP 840
Query: 107 GTMYGSSSEHTSYSPLQASPSPSGYQSHSGVSSGSSSYLGATPSPSSEAAPYG---TPSP 163
G+ E + AS +P G S +G SS+Y A PSP + P G TPS
Sbjct: 841 GSPPSRPYEAPTPGAGWAS-TPGGNYSEAGTPRDSSAYANA-PSPYLPSTPGGQPMTPSS 898
Query: 164 LSY--SSRQASPFTPGTGLDQYPTPE--------WHTTDIEVRINENARDPEFRGQIGVI 213
SY + P TPGTG +P W DI V ++ + IGVI
Sbjct: 899 ASYLPGTPGGQPMTPGTGGMDMMSPVLGGENEGPWFIPDILVNVHRAGEE-----SIGVI 953
Query: 214 RH-LGSGVCSVYLAEEERTLSIEA--HELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNG 270
R L G V L +I A +E+E V+P+ +DK+K++ G + TG L+ VD
Sbjct: 954 REALPDGSYRVGLGSSGNGETITALPNEMEAVVPRKSDKIKIMGGALRGATGKLIGVDGT 1013
Query: 271 EGVVKLTEEDDVKMIDVKFLCKY 293
+G+VK+ + DVK++D+ L K
Sbjct: 1014 DGIVKVDDTLDVKILDLVILAKL 1036
>gi|449506979|ref|XP_004162900.1| PREDICTED: putative transcription elongation factor SPT5 homolog
1-like, partial [Cucumis sativus]
Length = 849
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 120/261 (45%), Gaps = 46/261 (17%)
Query: 63 GATPLHDGSRTPG---PWDPSSTPARSIHNDAYPMDDSFNNSYPHTPGTMYGSSSEHTSY 119
G TP+HDG RTP W+P + PM S +N P T +G+S ++
Sbjct: 602 GTTPIHDGMRTPMRDRAWNPYA-----------PMSPSRDNWEEGNPAT-WGASPQYQPG 649
Query: 120 SP----LQA-------SPSPSGYQSHSGVSSGSSSYLGATPSPSSEAAPYG---TPSPLS 165
SP +A + +P G S +G S S PSP + P G TP+ S
Sbjct: 650 SPPSRTYEAPTPGSGWANTPGGSYSDAGTPRDSGSAYANAPSPYLPSTPGGQPMTPNSAS 709
Query: 166 Y--SSRQASPFTPGTGLDQYPTPE--------WHTTDIEVRINENARDPEFRGQIGVIRH 215
Y + P TPGTG +P W+ DI V + DP +GVIR
Sbjct: 710 YLPGTPGGQPMTPGTGGLDMMSPVIGGDTEGPWYMPDILVNYRRSGDDP----IMGVIRE 765
Query: 216 -LGSGVCSVYLAE--EERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEG 272
L G C + L T++ + E+E ++P+ +DK+K++ G + TG L+ VD +G
Sbjct: 766 VLPDGSCRIGLGSSGNGETVTAPSSEVEVIVPRKSDKIKIMGGALRGATGKLIGVDGTDG 825
Query: 273 VVKLTEEDDVKMIDVKFLCKY 293
+VK+ + DVK++D+ L K
Sbjct: 826 IVKVDDTLDVKILDLVILAKL 846
>gi|356509328|ref|XP_003523402.1| PREDICTED: putative transcription elongation factor SPT5 homolog
1-like [Glycine max]
Length = 1050
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 122/266 (45%), Gaps = 38/266 (14%)
Query: 52 PYKVGSRTPGGGATPLHDGSRTPG---PWDPSS--TPARSIHNDAYPMDDSFNNSYPHTP 106
PY R PG ATP+HDG RTP W+P + +P R D P S+ +P
Sbjct: 796 PYMTPMRDPG--ATPIHDGMRTPMRDPAWNPYTPMSPPRDNWEDGNP------GSWAASP 847
Query: 107 GTMYGSSSEHTSYSPLQAS---PSPSGYQSHSGVSSGSSSYLGATPSPSSEAAPYG---T 160
GS +P + +P G S +G SS+Y A PSP + P G T
Sbjct: 848 QYQPGSPPSRPYEAPTPGAGWASTPGGNYSEAGTPRDSSAYANA-PSPYLPSTPGGQPMT 906
Query: 161 PSPLSY--SSRQASPFTPGTGLDQYPTPE--------WHTTDIEVRINENARDPEFRGQI 210
PS SY + P TPGTG +P W DI V ++ + +
Sbjct: 907 PSSASYLPGTPGGQPMTPGTGGMDMMSPVLGGENEGPWFIPDILVNVHRAGEE-----SV 961
Query: 211 GVIRH-LGSGVCSVYLAEEERTLSIEA--HELEPVMPQPNDKVKVIVGEHKECTGVLLSV 267
GVIR L G V L +I A +E+E V+P+ +DK+K++ G + TG L+ V
Sbjct: 962 GVIREVLPDGSYRVALGSSGNGEAITALPNEMEAVVPRKSDKIKIMGGALRGATGKLIGV 1021
Query: 268 DNGEGVVKLTEEDDVKMIDVKFLCKY 293
D +G+VK+ + DVK++D+ L K
Sbjct: 1022 DGTDGIVKVDDTLDVKILDLVILAKL 1047
>gi|449462178|ref|XP_004148818.1| PREDICTED: putative transcription elongation factor SPT5 homolog
1-like [Cucumis sativus]
Length = 1044
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 134/312 (42%), Gaps = 67/312 (21%)
Query: 33 GNVRRDRELIGKTIKIT-----GGPYKVGSRTP----------------GGGATPLHDGS 71
G + DR I + I+ Y +GS TP G TP+HDG
Sbjct: 746 GMFKIDRNFISDNVAISTPHRDASRYGMGSETPMHPSRTPLHPYMTPMRDIGTTPIHDGM 805
Query: 72 RTP---GPWDPSSTPARSIHNDAYPMDDSFNNSYPHTPGTMYGSSSEHTSYSP----LQA 124
RTP W+P + PM S +N P T +G+S ++ SP +A
Sbjct: 806 RTPMRDRAWNPYA-----------PMSPSRDNWEEGNPAT-WGASPQYQPGSPPSRTYEA 853
Query: 125 -------SPSPSGYQSHSGVSSGSSSYLGATPSPSSEAAPYG---TPSPLSY--SSRQAS 172
+ +P G S +G S S PSP + P G TP+ SY +
Sbjct: 854 PTPGSGWANTPGGSYSDAGTPRDSGSAYANAPSPYLPSTPGGQPMTPNSASYLPGTPGGQ 913
Query: 173 PFTPGTGLDQYPTPE--------WHTTDIEVRINENARDPEFRGQIGVIRH-LGSGVCSV 223
P TPGTG +P W+ DI V + DP +GVIR L G C +
Sbjct: 914 PMTPGTGGLDMMSPVIGGDTEGPWYMPDILVNYRRSGDDP----IMGVIREVLPDGSCRI 969
Query: 224 YLAE--EERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEEDD 281
L T++ + E+E ++P+ +DK+K++ G + TG L+ VD +G+VK+ + D
Sbjct: 970 GLGSSGNGETVTAPSSEVEVIVPRKSDKIKIMGGALRGATGKLIGVDGTDGIVKVDDTLD 1029
Query: 282 VKMIDVKFLCKY 293
VK++D+ L K
Sbjct: 1030 VKILDLVILAKL 1041
>gi|302823823|ref|XP_002993560.1| hypothetical protein SELMODRAFT_449156 [Selaginella moellendorffii]
gi|300138627|gb|EFJ05389.1| hypothetical protein SELMODRAFT_449156 [Selaginella moellendorffii]
Length = 931
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 122/245 (49%), Gaps = 30/245 (12%)
Query: 64 ATPLHDGSRTP---GPWDPSSTPARSIHNDAYPMDDSFNNSYPHTPGTMYGSSSEHT--- 117
ATP+HDG RTP W+P+ TP R +D + + Y PGT + S
Sbjct: 698 ATPIHDGMRTPMRDRAWNPT-TPLR---DDTGWGAHTTSPQYMQQPGTPLATRSYEAPTP 753
Query: 118 ----SYSPLQASPSPSGYQSHSGVSSGSSSYLGATPS--PSSEAAPYGTP--SPLSYSSR 169
+ +P + S S ++ + + SS YL TP P + A P GTP P++ S
Sbjct: 754 GSGWANTPGSYADSGSPVEAVAHYGNPSSPYLPGTPGALPMTPAVP-GTPGGQPMTPGSG 812
Query: 170 QASPFTPGTGLDQYPT-PEWHTTDIEVRINENARDPEFRGQIGVIRH-LGSGVCSVYLAE 227
P +P TG + + +W ++ V + N IGVI L G C + + +
Sbjct: 813 VLDPTSPATGFNMHELEKQWGLPELMVTLRRNGD-----TMIGVIEEVLPDGYCRLSIGD 867
Query: 228 EERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEEDDVKMIDV 287
+ T+++ E+E V P+ ND++KV+ GE + +G L+ +D+ +G+V+ DVK++++
Sbjct: 868 D--TVTVSHSEIEIVQPEKNDRIKVVYGEFRGVSGKLIGIDSDDGIVRTGT--DVKILNM 923
Query: 288 KFLCK 292
KFL K
Sbjct: 924 KFLGK 928
>gi|115467008|ref|NP_001057103.1| Os06g0208300 [Oryza sativa Japonica Group]
gi|51091204|dbj|BAD35897.1| transcription factor-like [Oryza sativa Japonica Group]
gi|113595143|dbj|BAF19017.1| Os06g0208300 [Oryza sativa Japonica Group]
gi|347737117|gb|AEP20531.1| transcription factor [Oryza sativa Japonica Group]
Length = 291
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 122/270 (45%), Gaps = 51/270 (18%)
Query: 52 PYKVGSRTPGGGATPLHDGSRTPGP--WDPSSTPARSIHNDAYPMDDSFNNSYPHTPGTM 109
PY+ R PG ATP+HDG RTP W P S P D++ P T
Sbjct: 43 PYQTPMRDPG--ATPIHDGMRTPMRRGWAPMSPPR-----------DNWEEGNPAT---- 85
Query: 110 YGSSSEHTSYSPLQ---ASPSP-SGYQSHSGVSSGSS-----SYLGATPSPSSEAAPYG- 159
+GSS + +P +P+P SG+ + GVS + S G PSP + P G
Sbjct: 86 WGSSPAYQPGTPPARPYEAPTPGSGWANTPGVSYNDAPTPRESNYGNAPSPYVPSTPVGQ 145
Query: 160 --TPSPLSY--SSRQASPFTPG-TGLDQYPTP--------EWHTTDIEVRINENARDPEF 206
TP+ SY + P TPG G+D +P W D+ V + D
Sbjct: 146 PMTPNSASYLPGTPGGQPMTPGNVGMDIM-SPIIGGEGEGNWLLPDVLVNVLRAGDD--- 201
Query: 207 RGQIGVIRH-LGSGVCSVYLAE--EERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGV 263
GV+R L G C V L +++ ELE + P+ +DK+K++ G + +G
Sbjct: 202 --GPGVVREVLADGSCRVALGSSGNGEIVTVLPTELEVIRPKKSDKIKIMNGNFRGYSGK 259
Query: 264 LLSVDNGEGVVKLTEEDDVKMIDVKFLCKY 293
L+ +D +G+VKL + +VK++D+ L K
Sbjct: 260 LIGIDGSDGIVKLDDTYEVKILDMVILAKL 289
>gi|357124871|ref|XP_003564120.1| PREDICTED: putative transcription elongation factor SPT5 homolog
1-like [Brachypodium distachyon]
Length = 904
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 118/266 (44%), Gaps = 42/266 (15%)
Query: 52 PYKVGSRTPGGGATPLHDGSRTPG---PWDPSSTPARSIHNDAYPMDDSFNNSYPHTPGT 108
P++ R PG ATP+HDG RTP W P S P R D P D++ +S + PGT
Sbjct: 655 PFQTPMRDPG--ATPIHDGMRTPMRSRAWAPMS-PPRDNWEDGNP--DTWGSSPAYHPGT 709
Query: 109 MYGSSSEHTSYSPLQASPSPSGYQSHSGVSSGS-----SSYLGATPSPSSEAAPYG---T 160
P +A SG+ + GVS S G PSP + P G T
Sbjct: 710 --------PPARPYEAPTPGSGWANTPGVSYNDVPTPRESNYGNAPSPYVPSTPVGQPMT 761
Query: 161 PSPLSY--SSRQASPFTPG-TGLDQYP-------TPEWHTTDIEVRINENARDPEFRGQI 210
P+ SY + P TPG G+D W D+ V + D
Sbjct: 762 PNSASYLPGTPGGQPMTPGNVGMDMMSPIIGGEGEVNWLLPDVLVNVLRAGDDGP----- 816
Query: 211 GVIRH-LGSGVCSVYLAEEER--TLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSV 267
G++R LG G C V L +++ +ELE V P+ D++K++ G + G L+ +
Sbjct: 817 GIVREVLGDGSCRVALGSSGNGDIVTVLPNELEAVRPKKGDRIKILNGNFRGFVGKLIGI 876
Query: 268 DNGEGVVKLTEEDDVKMIDVKFLCKY 293
D +G+VKL + +VK++D+ L K
Sbjct: 877 DGSDGIVKLDDTYEVKILDMVILAKL 902
>gi|326516394|dbj|BAJ92352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 262
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 119/267 (44%), Gaps = 44/267 (16%)
Query: 52 PYKVGSRTPGGGATPLHDGSRTPG---PWDPSSTPARSIHNDAYPMDDSFNNSYPHTPGT 108
P++ R PG ATP+HDG RTP W P S P R D P D++ +S + PGT
Sbjct: 13 PFQTPMRDPG--ATPIHDGMRTPMRSRAWAPMS-PPRDNWEDGNP--DTWGSSPAYQPGT 67
Query: 109 MYGSSSEHTSYSPLQASPSPSGYQSHSGVSSGS------SSYLGATPSPSSEAAPYG--- 159
P +A SG+ + GVS S+Y A PSP + P G
Sbjct: 68 --------PPARPYEAPTPGSGWANTPGVSYNDVPTPRESNYANA-PSPYVPSTPVGQPM 118
Query: 160 TPSPLSY--SSRQASPFTPGTGLDQYPTP--------EWHTTDIEVRINENARDPEFRGQ 209
TP+ +Y + P TPG +P W D+ V + +
Sbjct: 119 TPNSAAYLPGTPGGQPMTPGNAGMDIMSPVMGGEGEGNWALPDVLVNVLAAGDE-----G 173
Query: 210 IGVIRH-LGSGVCSVYLAEEER--TLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLS 266
GV+R LG G C V L +++ ELE + P+ +D++K++ G + G L+
Sbjct: 174 PGVVREVLGDGTCRVALGSSGNGDIVTVLPTELEVIRPKKSDRIKIMNGTFRGFVGKLIG 233
Query: 267 VDNGEGVVKLTEEDDVKMIDVKFLCKY 293
+D +G+VKL + +VK++D+ L K
Sbjct: 234 IDGSDGIVKLDDTYEVKILDMVILAKL 260
>gi|413952726|gb|AFW85375.1| hypothetical protein ZEAMMB73_424690 [Zea mays]
Length = 1045
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 136/318 (42%), Gaps = 78/318 (24%)
Query: 5 FMSPRIS----SPMHPSGGRGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYKVGSRTP 60
F PR S +PMHPS R HH Y+ R P
Sbjct: 775 FREPRYSLGGETPMHPS---------RTPHHA--------------------YQTPMRDP 805
Query: 61 GGGATPLHDGSRTP---GPWDPSSTPARSIHNDAYPMDDSFNNSYPHTPGTMYGSSSEHT 117
G ATP+HDG RTP W P S P R D P ++ +S + PGT E
Sbjct: 806 G--ATPIHDGMRTPMRSRAWAPMS-PPRDNWEDGNPA--TWGSSPAYQPGTPQARPYE-- 858
Query: 118 SYSPLQASPSP-SGYQSHSGVSSGSS-----SYLGATPSPSSEAAPYG---TPSPLSY-- 166
+P+P SG+ + GVS + +Y A PSP + P G TP+ SY
Sbjct: 859 -------APTPGSGWANTPGVSFNDAPTPRDNYANA-PSPYVPSTPVGQPMTPNSASYLP 910
Query: 167 SSRQASPFTPG-TGLDQYP-------TPEWHTTDIEVRINENARDPEFRGQIGVIRH-LG 217
+ P TPG G+D W D+ V + D GV+R LG
Sbjct: 911 GTPGGQPMTPGNAGMDMLSPIIGGDGEVAWLLPDVLVNVLRGGDDGP-----GVVREVLG 965
Query: 218 SGVCSVYLAEEER--TLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVK 275
G C V L +++ A+E+E + P+ +D++K++ G + TG L+ +D +G+V+
Sbjct: 966 DGSCRVALGSSGNGDVVTVLANEVEVIRPKKSDRIKILNGNFRGYTGKLIGIDGSDGIVR 1025
Query: 276 LTEEDDVKMIDVKFLCKY 293
L E +VK++D+ L K
Sbjct: 1026 LDETYEVKILDMVILAKL 1043
>gi|242095074|ref|XP_002438027.1| hypothetical protein SORBIDRAFT_10g006840 [Sorghum bicolor]
gi|241916250|gb|EER89394.1| hypothetical protein SORBIDRAFT_10g006840 [Sorghum bicolor]
Length = 1025
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 136/318 (42%), Gaps = 78/318 (24%)
Query: 5 FMSPRIS----SPMHPSGGRGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYKVGSRTP 60
F PR S +PMHPS R HH Y+ R P
Sbjct: 755 FREPRYSLGGETPMHPS---------RTPHHA--------------------YQTPMRDP 785
Query: 61 GGGATPLHDGSRTPG---PWDPSSTPARSIHNDAYPMDDSFNNSYPHTPGTMYGSSSEHT 117
G ATP+HDG RTP W P S P R D P ++ +S + PGT E
Sbjct: 786 G--ATPIHDGMRTPMRSRAWAPMS-PPRDNWEDGNPA--TWGSSPAYQPGTPQARPYE-- 838
Query: 118 SYSPLQASPSP-SGYQSHSGVSSGSS-----SYLGATPSPSSEAAPYG---TPSPLSY-- 166
+P+P SG+ + GVS + +Y A PSP + P G TP+ +Y
Sbjct: 839 -------APTPGSGWANTPGVSFNDAPTPRDNYANA-PSPYVPSTPVGQPMTPNSAAYLP 890
Query: 167 SSRQASPFTPGT-GLDQYP-------TPEWHTTDIEVRINENARDPEFRGQIGVIRH-LG 217
+ P TPGT GLD W D+ V + D GV+R LG
Sbjct: 891 GTPGGQPMTPGTVGLDAMSPILGGEGDGTWLLPDVMVNVLRGGDDGP-----GVVREVLG 945
Query: 218 SGVCSVYLAEEER--TLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVK 275
G C V L +++ +E+E + P+ +DK+K++ G + TG L+ +D +G+V+
Sbjct: 946 DGSCRVALGSSGNGDMVTVLPNEVEVIRPKKSDKIKILNGNFRGYTGKLIGIDGSDGIVR 1005
Query: 276 LTEEDDVKMIDVKFLCKY 293
L + +VK++D+ L K
Sbjct: 1006 LDDTYEVKILDMVILAKL 1023
>gi|302780661|ref|XP_002972105.1| hypothetical protein SELMODRAFT_96727 [Selaginella moellendorffii]
gi|300160404|gb|EFJ27022.1| hypothetical protein SELMODRAFT_96727 [Selaginella moellendorffii]
Length = 1003
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 121/248 (48%), Gaps = 40/248 (16%)
Query: 64 ATPLHDGSRTP---GPWDPSSTPARSIHNDAYPMDDSFNNSYPHTPGTMYGSSSEHTSYS 120
ATP+HDG RTP W+P+ TP R +D + + Y PGT + S
Sbjct: 774 ATPIHDGMRTPMRDRAWNPT-TPLR---DDTGWGAHTTSPQYMQQPGTPLATRSYE---- 825
Query: 121 PLQASPSP-SGYQSHSGVSSGSSSYLGATPSPSSEAAPY--GTPSPLSYSSRQ-----AS 172
+P+P SG+ + G + S S + A + ++PY GTP L +
Sbjct: 826 ----APTPGSGWANTPGSYADSGSPVEAVAHYGNPSSPYLPGTPGALPMTPAVPGTPGGQ 881
Query: 173 PFTPGTGLDQYPTP-------EWHTTDIEVRINENARDPEFRGQIGVIRH-LGSGVCSVY 224
P TPG+G+ +P +W ++ V + N IGVI L G C +
Sbjct: 882 PMTPGSGVLDPTSPATGKLEKQWGLPELMVTLRRNGD-----TTIGVIEEVLPDGYCRLS 936
Query: 225 LAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEEDDVKM 284
+ ++ T+++ E+E V P+ ND++KV+ GE + +G L+ +D+ +G+V+ DVK+
Sbjct: 937 IGDD--TVTVSHSEIEIVQPEKNDRIKVVYGEFRGVSGKLIGIDSDDGIVRTGT--DVKI 992
Query: 285 IDVKFLCK 292
+++KFL K
Sbjct: 993 LNMKFLGK 1000
>gi|440799586|gb|ELR20630.1| Transcription elongation factor, putative [Acanthamoeba castellanii
str. Neff]
Length = 1184
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 145 LGATPSPSSEAAPYGTPSPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDP 204
+ + PS + +AP TP +SY S + G W T IEVR+++ R
Sbjct: 1029 MMSLPSLARASAP-ATPGMISYDSDRVDTTNTVAGGVMSTDEPWTTEGIEVRVSDAYRGG 1087
Query: 205 EFRGQIGVIRHLGSGVCSVYLAEEE----RTLSIEAHELEPVMPQPNDKVKVIVGEHKEC 260
++ VI G C V + + + +LSI + LEPV+P D+VKVI GE K
Sbjct: 1088 QYSQASAVITSAGRDSCRVTVRDRDGNDLESLSIPSPYLEPVVPAKKDRVKVIRGELKGN 1147
Query: 261 TGVLLSVDNGEGVVKLTEEDDVKMIDVKFLCKY 293
G+L+ +D +G+VK+ D+K++ + L +Y
Sbjct: 1148 VGLLVGIDGSDGIVKMEPNLDIKLLALPLLARY 1180
>gi|218197781|gb|EEC80208.1| hypothetical protein OsI_22102 [Oryza sativa Indica Group]
Length = 1120
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 122/270 (45%), Gaps = 51/270 (18%)
Query: 52 PYKVGSRTPGGGATPLHDGSRTPGP--WDPSSTPARSIHNDAYPMDDSFNNSYPHTPGTM 109
PY+ R PG ATP+HDG RTP W P S P D++ P T
Sbjct: 872 PYQTPMRDPG--ATPIHDGMRTPMRRGWAPMSPPR-----------DNWEEGNPAT---- 914
Query: 110 YGSSSEHTSYSPLQ---ASPSP-SGYQSHSGVSSGSS-----SYLGATPSPSSEAAPYG- 159
+GSS + +P +P+P SG+ + GVS + S G PSP + P G
Sbjct: 915 WGSSPAYQPGTPPARPYEAPTPGSGWANTPGVSYNDAPTPRESNYGNAPSPYVPSTPVGQ 974
Query: 160 --TPSPLSY--SSRQASPFTPG-TGLDQYPTP--------EWHTTDIEVRINENARDPEF 206
TP+ SY + P TPG G+D +P W D+ V + D
Sbjct: 975 PMTPNSASYLPGTPGGQPMTPGNVGMDIM-SPIIGGEGEGNWLLPDVLVNVLRAGDDGP- 1032
Query: 207 RGQIGVIRH-LGSGVCSVYLAE--EERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGV 263
GV+R L G C V L +++ ELE + P+ +DK+K++ G + +G
Sbjct: 1033 ----GVVREVLADGSCRVALGSSGNGEIVTVLPTELEVIRPKKSDKIKIMNGNFRGYSGK 1088
Query: 264 LLSVDNGEGVVKLTEEDDVKMIDVKFLCKY 293
L+ +D +G+VKL + +VK++D+ L K
Sbjct: 1089 LIGIDGSDGIVKLDDTYEVKILDMVILAKL 1118
>gi|222635168|gb|EEE65300.1| hypothetical protein OsJ_20538 [Oryza sativa Japonica Group]
Length = 1008
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 122/270 (45%), Gaps = 51/270 (18%)
Query: 52 PYKVGSRTPGGGATPLHDGSRTPGP--WDPSSTPARSIHNDAYPMDDSFNNSYPHTPGTM 109
PY+ R PG ATP+HDG RTP W P S P D++ P T
Sbjct: 760 PYQTPMRDPG--ATPIHDGMRTPMRRGWAPMSPPR-----------DNWEEGNPAT---- 802
Query: 110 YGSSSEHTSYSPLQ---ASPSP-SGYQSHSGVSSGSS-----SYLGATPSPSSEAAPYG- 159
+GSS + +P +P+P SG+ + GVS + S G PSP + P G
Sbjct: 803 WGSSPAYQPGTPPARPYEAPTPGSGWANTPGVSYNDAPTPRESNYGNAPSPYVPSTPVGQ 862
Query: 160 --TPSPLSY--SSRQASPFTPG-TGLDQYPTP--------EWHTTDIEVRINENARDPEF 206
TP+ SY + P TPG G+D +P W D+ V + D
Sbjct: 863 PMTPNSASYLPGTPGGQPMTPGNVGMDIM-SPIIGGEGEGNWLLPDVLVNVLRAGDDGP- 920
Query: 207 RGQIGVIRH-LGSGVCSVYLAE--EERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGV 263
GV+R L G C V L +++ ELE + P+ +DK+K++ G + +G
Sbjct: 921 ----GVVREVLADGSCRVALGSSGNGEIVTVLPTELEVIRPKKSDKIKIMNGNFRGYSGK 976
Query: 264 LLSVDNGEGVVKLTEEDDVKMIDVKFLCKY 293
L+ +D +G+VKL + +VK++D+ L K
Sbjct: 977 LIGIDGSDGIVKLDDTYEVKILDMVILAKL 1006
>gi|357463691|ref|XP_003602127.1| Global transcription factor group [Medicago truncatula]
gi|355491175|gb|AES72378.1| Global transcription factor group [Medicago truncatula]
Length = 1040
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 120/253 (47%), Gaps = 30/253 (11%)
Query: 62 GGATPLHDGSRTP---GPWDPSS--TPARSIHNDAYPMDDSFNNSYPHTPGTMYGSSSEH 116
GATP+HDG RTP W+P + +P R D P S+ S + PG+ E
Sbjct: 794 AGATPIHDGMRTPMRDRAWNPYAPMSPPRDNWEDGNP--GSWGASPQYQPGSPPSRPYEA 851
Query: 117 TSYSPLQASPSPSGYQSHSGVSSGSSSYLGATPSPSSEAAPYG--TPSPLSY--SSRQAS 172
+ AS +P G S +G SS+Y A PSP + P TP+ SY +
Sbjct: 852 PTPGAGWAS-TPGGNYSEAGTPRDSSAYANA-PSPYLPSTPGQPMTPNSASYLPGTPGGQ 909
Query: 173 PFTPGTGLDQYPTPE--------WHTTDIEVRINENARDPEFRGQIGVIRH-LGSGVCSV 223
P TPGTG +P W DI V ++ + +GVI+ L G V
Sbjct: 910 PMTPGTGGLDIMSPVLGGDNEGPWFMPDILVNVHRAGEE-----SVGVIKEVLPDGSYRV 964
Query: 224 YLAEEE--RTLSIEAHELEPVMPQPNDKVKVIVG-EHKECTGVLLSVDNGEGVVKLTEED 280
L T+S ++E+E V+P+ +DK+K++ G + TG L+ VD +G+VK+ +
Sbjct: 965 ALGSNGNGETISALSNEVEAVVPRKSDKIKIMGGGTLRGSTGKLIGVDGTDGIVKVDDTL 1024
Query: 281 DVKMIDVKFLCKY 293
DVK++D+ L K
Sbjct: 1025 DVKILDLVILAKL 1037
>gi|224077938|ref|XP_002305464.1| predicted protein [Populus trichocarpa]
gi|222848428|gb|EEE85975.1| predicted protein [Populus trichocarpa]
Length = 147
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 77/157 (49%), Gaps = 19/157 (12%)
Query: 140 GSSSYLGATPSPSSEAAPYGTPSPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINE 199
GS+SYL TP +P + SP G G + P W DI V ++
Sbjct: 4 GSASYLPGTPGGQ-------LMTPGTNGLDMMSPVIGGDG--EGP---WFIPDILVNVHR 51
Query: 200 NARDPEFRGQIGVIRH-LGSGVCSVYLAEEE--RTLSIEAHELEPVMPQPNDKVKVIVGE 256
+P +G+IR L G C + L TL+ E+E V+P+ +DK+K++ G
Sbjct: 52 TTDEP----TVGIIREVLQDGSCKIALGANGNGETLTALPSEIEIVVPRKSDKIKILGGA 107
Query: 257 HKECTGVLLSVDNGEGVVKLTEEDDVKMIDVKFLCKY 293
H+ TG L+ VD +G+VKL + DVK++D+ L K
Sbjct: 108 HRGVTGKLIGVDGTDGIVKLEDTLDVKILDMAILAKL 144
>gi|168018336|ref|XP_001761702.1| RNA polymerase II transcription elongation factor SPT5
[Physcomitrella patens subsp. patens]
gi|162687073|gb|EDQ73458.1| RNA polymerase II transcription elongation factor SPT5
[Physcomitrella patens subsp. patens]
Length = 896
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 118/244 (48%), Gaps = 35/244 (14%)
Query: 64 ATPLHDGSRTPG---PWDPSS--TPARSIH-NDAYPMDDSFNNSYPH-TPGTMYGSSSEH 116
ATP DG RTP W+P + TP R + +DA P + + TPG + + +
Sbjct: 670 ATPSLDGMRTPMRDRAWNPHTPMTPHRGNNWDDANPSTWDIHTPFEAPTPGNGWSAQTPG 729
Query: 117 TSYSPLQASPSPSGYQSHSGVSSGSSSYLGATPSPSSEAAPYG---TPSPLSY--SSRQA 171
S+S +A QS++ L A PSP P G TP SY +
Sbjct: 730 ASFS--EAGTPTEPVQSYALC-------LAAAPSPYLPGTPGGPPMTPGVPSYLPGTPGG 780
Query: 172 SPFTPGTG-LDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGVCSVYL--AEE 228
P TPGTG LD PT + I IN + P+ +I V HL G C V L +
Sbjct: 781 QPMTPGTGGLD--PT----SPAIGEHINYS---PQTELRICV--HLQDGSCRVALGPTGD 829
Query: 229 ERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEEDDVKMIDVK 288
L + +++ V+P+ DK+K++ GEH+ CTG L+ +D +G+V+L + DV+++D+
Sbjct: 830 GDILLVGQGDMDLVLPKKTDKIKIVSGEHRGCTGKLMGIDGADGIVRLDDTLDVRILDMS 889
Query: 289 FLCK 292
L K
Sbjct: 890 SLSK 893
>gi|297721593|ref|NP_001173159.1| Os02g0772000 [Oryza sativa Japonica Group]
gi|255671276|dbj|BAH91888.1| Os02g0772000 [Oryza sativa Japonica Group]
Length = 954
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 116/265 (43%), Gaps = 45/265 (16%)
Query: 52 PYKVGSRTPGGGATPLHDGSRTPGP---WDPSSTPARSIHNDAYPMDDSFNNSYPHTPGT 108
P++ R PG ATP+ +G RTP P W P S P R+ DA ++ +S + PGT
Sbjct: 710 PFQTPLRDPG--ATPVPNGMRTPMPSRAWAPMS-PPRNGWEDAV----TWESSPTYQPGT 762
Query: 109 MYGSSSEHTSYSPLQASPSP-SGYQSHSGVSSGSSSYLGATPSPSSEAAPYG---TPSPL 164
E +P+P SG+ GVS G +S G PS + P G TP+P
Sbjct: 763 PVPQPHE---------APTPGSGWAVTPGVSFGDAS--GKNPSSYATPTPSGQPMTPNPA 811
Query: 165 SY--SSRQASPFTPGTGLDQYPTP--------EWHTTDIEVRINENARDPEFRGQIGVIR 214
SY S+ P T G +P W D+ V + D GV++
Sbjct: 812 SYLPSTPGGQPMTLGYIEMDIMSPAIGEEGGRNWLLPDVLVNVLREGYDT----TCGVVK 867
Query: 215 H-LGSGVCSVYLAEEERTLSIEA--HELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGE 271
L G C V L I A +E E V P+ NDK+K++ G + TG LL VD +
Sbjct: 868 EVLPDGSCRVALGSSGSGDEITAFPNEFEVVKPKKNDKLKIMSGSWRGLTGKLLGVDGSD 927
Query: 272 GVVK---LTEEDDVKMIDVKFLCKY 293
G+VK L D K++D L K
Sbjct: 928 GIVKVDGLETTDQTKILDTAILGKL 952
>gi|328773043|gb|EGF83080.1| hypothetical protein BATDEDRAFT_84603 [Batrachochytrium dendrobatidis
JAM81]
Length = 1068
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 118/281 (41%), Gaps = 59/281 (20%)
Query: 62 GGATPLHD-GSRTPGPWDPSS-TPARSIHNDAYPMDDSFNNSYPHTPGTMYGSSSEHTSY 119
GG TP D GSRTP W+ SS TPA + DSF H P + + T Y
Sbjct: 791 GGRTPAWDSGSRTPA-WNASSKTPAWEASSRTPARPDSFFPGADHMPYQNALADNADTPY 849
Query: 120 SPLQASPSPSGYQSHSGVSSGSSSYLGATPS-PSSEAAPYGTPSPLSYSSRQ-------- 170
P ++P+ G S +G+ GA PS P++ P +PL Q
Sbjct: 850 IP--STPAVDGMHGQSHNVTGTP---GAYPSTPAAHNLP---QTPLGGIGGQYPNMGSVP 901
Query: 171 -----------ASPFTPGT--------------GLDQYPTPEWHTTDIEVRINENA---- 201
A+PF P T G+D + + W IEVRI ++
Sbjct: 902 NTGLPQTPFVPATPFNPSTPANVHGDYYGSPNGGMDVHVSENWLCVGIEVRIIQSQTGRR 961
Query: 202 -RDPEFRGQIGVIRHLGSGVCSVYLAEE---------ERTLSIEAHELEPVMPQPNDKVK 251
RD ++ G+ I+ + G + + E + L P+ P+ + K
Sbjct: 962 FRDGQYDGRRAAIKTVEQGNRNAQILFLDGGVDGHGGEVISGVPDECLGPIHPEKKEAFK 1021
Query: 252 VIVGEHKECTGVLLSVDNGEGVVKLTEEDDVKMIDVKFLCK 292
V+ GE+++ TGVLLS+D EGVV+L D+ M+D+ L K
Sbjct: 1022 VLKGEYRDYTGVLLSIDMEEGVVRLDGRSDILMMDMSSLAK 1062
>gi|17542068|ref|NP_502283.1| Protein SPT-5 [Caenorhabditis elegans]
gi|74965276|sp|Q21338.3|SPT5H_CAEEL RecName: Full=Transcription elongation factor SPT5; AltName: Full=DRB
sensitivity-inducing factor large subunit; Short=DSIF
large subunit
gi|3878373|emb|CAA92685.1| Protein SPT-5 [Caenorhabditis elegans]
Length = 1208
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 129/308 (41%), Gaps = 77/308 (25%)
Query: 53 YKVGSRTPGGGATPLHDGSRTPGPWDPSSTPA--RSIHNDAYPMDDSFNNSY--PHTPG- 107
Y RTPG + P SRTP S TPA S H+ P ++NN Y P +P
Sbjct: 913 YDDSGRTPGYESMP----SRTPNYDSSSKTPAYPESEHSARTP---AYNNDYDIPLSPAY 965
Query: 108 -----TMYGSSSEHTSYSPLQASPSPSGYQSHSGVS--------SGSSSYLGATPSPSSE 154
Y ++ T P S +P GY ++ S + +G T SP+ +
Sbjct: 966 EPDAPEAYDNAPART---PAFVSRTP-GYDTYENSSPTYEPDAATKVEEDIGDTSSPTYD 1021
Query: 155 AAP--YGTPSPLSYSSRQ------------ASPFTPGTG--LDQYPTPE----------- 187
+ P Y P+P + + A+P TPG+G DQY P
Sbjct: 1022 SPPHSYVVPTPGAMLNPATPGAYHVDTPGFAAPMTPGSGGAYDQYVAPSPFAGYDSNNYN 1081
Query: 188 ------------------WHTTDIEVRINENARDPEFRGQIGVIRHLGSGVCSVYLAEEE 229
W ++ V+I ++ + F G+ +I+ + G VY+ + +
Sbjct: 1082 NADGAIEQIPDHFLAQGVWIVQNLCVQIKDH--EGRFNGREAIIKDVTDGKVDVYMPDHK 1139
Query: 230 RTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEE-DDVKMIDVK 288
L ++ +L P+ PQP D +VI G+ +G L+S+D E V++ E+ D+++I++
Sbjct: 1140 CNLEVDFDQLTPMKPQPGDDARVIFGQDAGHSGQLVSMDGFEAVIRSQEDMSDMRVINIG 1199
Query: 289 FLCKYKPE 296
CK E
Sbjct: 1200 LCCKMHSE 1207
>gi|147838939|emb|CAN68098.1| hypothetical protein VITISV_043874 [Vitis vinifera]
Length = 1107
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 116/260 (44%), Gaps = 51/260 (19%)
Query: 63 GATPLHDGSRTP---GPWDPSS--TPARSIHNDAYPMDDSFNNSYP-HTPGTMYGSSSEH 116
GATP+HDG RTP W+P + +P R + P DS+ + P + PG+ + E
Sbjct: 797 GATPIHDGMRTPMRDRAWNPYAPMSPPRDNWEEGNP--DSWVXTSPQYQPGSPPSRTYEA 854
Query: 117 TSYSPLQASPSPSGYQSHSGVSSGSSSYLGATPSPSSEAAPYG---TPSPLSY--SSRQA 171
+ AS +P G S +G S+ PSP + P G TP+ +SY +
Sbjct: 855 PTPGSGWAS-TPGGNYSEAGTPRDSTPAYANVPSPYLPSTPGGQPMTPNSVSYLPGTPGG 913
Query: 172 SPFTPGTGLD-------QYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHL-----GSG 219
P TPGTG+D + P W DI V I R P +GVIR + G G
Sbjct: 914 QPMTPGTGVDVMSPIGGEQEGP-WFMPDILVHI----RRPGEENTLGVIREVLPHASGMG 968
Query: 220 V----------CSVYLAEEERT----------LSIEAHELEPVMPQPNDKVKVIVGEHKE 259
+ C V R +++ E++ V P+ +DK+K++ G H+
Sbjct: 969 IFHWLSGSINKCFVVQDGTYRVGLGSSGGGEIVTVLHAEIDAVAPRKSDKIKIMGGAHRG 1028
Query: 260 CTGVLLSVDNGEGVVKLTEE 279
TG L+ VD +G+VK +E
Sbjct: 1029 ATGKLIGVDGTDGIVKAMKE 1048
>gi|413944023|gb|AFW76672.1| hypothetical protein ZEAMMB73_018684 [Zea mays]
Length = 228
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 107/227 (47%), Gaps = 37/227 (16%)
Query: 93 PMDDSFNNSYPHTPGTMYGSSSEHTSYSPLQA----SPSP-SGYQSHSGVSSGSS----- 142
P D++ + P T +GSS + +P QA +P+P SG+ + GVS +
Sbjct: 11 PPRDNWEDGNPAT----WGSSPAYQPGTP-QARPYEAPTPGSGWANTPGVSFNDAPTPRD 65
Query: 143 SYLGATPSPSSEAAPYG---TPSPLSY--SSRQASPFTPG-TGLDQYP-------TPEWH 189
+Y A PSP + P G TP+ SY + P TPG G+D W
Sbjct: 66 NYANA-PSPYVPSTPVGQPMTPNSASYLPGTPGGQPMTPGNAGMDMMSPIIGGEGEATWL 124
Query: 190 TTDIEVRINENARDPEFRGQIGVIRH-LGSGVCSVYLAEEER--TLSIEAHELEPVMPQP 246
D+ V + D GV+R LG G C V L +++ +E+E + P+
Sbjct: 125 LPDVLVNVLSGGDD-----GPGVVREVLGDGSCRVALGSSGNGDMVTVLPNEVEVIRPKK 179
Query: 247 NDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEEDDVKMIDVKFLCKY 293
+DK+K++ G + TG L+ +D +G+V+L + +VK++D+ L K
Sbjct: 180 SDKIKILNGSFRGHTGKLIGIDGSDGIVRLDDTYEVKILDMVILAKL 226
>gi|198422714|ref|XP_002120024.1| PREDICTED: similar to suppressor of Ty 5 homolog [Ciona intestinalis]
Length = 1039
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 85/243 (34%), Positives = 106/243 (43%), Gaps = 84/243 (34%)
Query: 52 PYKVGSRTPGGGA-TPLHDGSRTP----GPWDP--SSTPARSIHND-------------- 90
P GSRTP GA TPLHDG+RTP WDP ++TPAR + D
Sbjct: 802 PLHDGSRTPHYGAQTPLHDGNRTPRGAGSAWDPTNANTPARPDNFDYDAASPAPYGGGTP 861
Query: 91 ------AYPMDDS-----FNNSYPHTPGTMYGSSSEHTSYS-----PL---QASPSP--- 128
Y DD+ ++N+ P TPG Y S ++ YS PL +A+PSP
Sbjct: 862 NPQTPGGYQSDDASPATPYSNA-PQTPGG-YASDRTYSPYSGVTPSPLGSYEATPSPLGS 919
Query: 129 --SGYQ---SHSGVSSGSSSY--------LGATPSPSSEAAPYGTPSPLSYSSRQASPFT 175
S YQ S + S +SY ATPSPS TPSPL Y+S P T
Sbjct: 920 SYSNYQPTPSPGDLQSSPASYQPSPSPGSYQATPSPSGYLP---TPSPLDYTS----PLT 972
Query: 176 PGTG-----LDQYPTP-------------EWHTTDIEVRINENARDPEF-RGQIGVIRHL 216
PG G L Y TP EW + DI VR+ +N + G+ GVIR +
Sbjct: 973 PGGGITPSPLGSYGTPGSVGSLIDHGGVSEWQSVDIVVRVKQNHEEGGIASGKTGVIRSI 1032
Query: 217 GSG 219
G
Sbjct: 1033 TVG 1035
>gi|46805362|dbj|BAD16863.1| putative KOW domain-containing transcription factor [Oryza sativa
Japonica Group]
Length = 1013
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 110/265 (41%), Gaps = 53/265 (20%)
Query: 52 PYKVGSRTPGGGATPLHDGSRTPGP---WDPSSTPARSIHNDAYPMDDSFNNSYPHTPGT 108
P++ R PG ATP+ +G RTP P W P S P ++ + PGT
Sbjct: 777 PFQTPLRDPG--ATPVPNGMRTPMPSRAWAPMSPPRLAL-------------GWQSMPGT 821
Query: 109 MYGSSSEHTSYSPLQASPSP-SGYQSHSGVSSGSSSYLGATPSPSSEAAPYG---TPSPL 164
E +P+P SG+ GVS G +S G PS + P G TP+P
Sbjct: 822 PVPQPHE---------APTPGSGWAVTPGVSFGDAS--GKNPSSYATPTPSGQPMTPNPA 870
Query: 165 SY--SSRQASPFTPGTGLDQYPTP--------EWHTTDIEVRINENARDPEFRGQIGVIR 214
SY S+ P T G +P W D+ V + D GV++
Sbjct: 871 SYLPSTPGGQPMTLGYIEMDIMSPAIGEEGGRNWLLPDVLVNVLREGYDT----TCGVVK 926
Query: 215 H-LGSGVCSVYLAEEERTLSIEA--HELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGE 271
L G C V L I A +E E V P+ NDK+K++ G + TG LL VD +
Sbjct: 927 EVLPDGSCRVALGSSGSGDEITAFPNEFEVVKPKKNDKLKIMSGSWRGLTGKLLGVDGSD 986
Query: 272 GVVK---LTEEDDVKMIDVKFLCKY 293
G+VK L D K++D L K
Sbjct: 987 GIVKVDGLETTDQTKILDTAILGKL 1011
>gi|3337352|gb|AAC27397.1| putative transcription elongation factor [Arabidopsis thaliana]
Length = 990
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 109/245 (44%), Gaps = 36/245 (14%)
Query: 63 GATPLHDGSRTPG---PWDPSS--TPARSIHNDAYPMDDSFNNSYPHTPGTMYGSSSEHT 117
GATP+HDG RTP W+P +P R D P + TPG+ +GSS+
Sbjct: 771 GATPIHDGMRTPMRGRAWNPYMPMSPPRDNWEDGNPGSWGTSPYEAATPGSDWGSST--- 827
Query: 118 SYSPLQASPSPSGYQSH-SGVSSGSSSYLGATPSPSSEAAPYGTPSPLSYSSRQASPFTP 176
P S Y+ + +++G YL + PSP++ SS P TP
Sbjct: 828 --------PGRSSYRDAGTPINNGFVYYLLCLNA--------NAPSPMTPSSTSYLPTTP 871
Query: 177 GTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLG---SGVCSVYLAE--EERT 231
G Q TP TD++V + +F + + G G C V L E T
Sbjct: 872 GG---QAMTP---GTDLDVMSLDIVNIFQFTDYVSLFFLCGHHQDGSCVVALGHRGEGET 925
Query: 232 LSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEEDDVKMIDVKFLC 291
+ +++ V P+ N++VK++ G++ T ++ D +G+VKL E D+K++ + L
Sbjct: 926 IRATQNKVSLVCPKKNERVKILGGKYCGSTAKVIGEDGQDGIVKLDESLDIKILKLTILA 985
Query: 292 KYKPE 296
K E
Sbjct: 986 KLVHE 990
>gi|308451868|ref|XP_003088830.1| hypothetical protein CRE_20631 [Caenorhabditis remanei]
gi|308245173|gb|EFO89125.1| hypothetical protein CRE_20631 [Caenorhabditis remanei]
Length = 562
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 122/288 (42%), Gaps = 65/288 (22%)
Query: 58 RTPGGGA----TPLHDGSRTPGPWDPSSTPARSIHNDAYPMDDSFNNSYPHTPGTMYGSS 113
RTPG + TP +D S+TP + TP + D P ++ +NN+ TP G +
Sbjct: 282 RTPGYESLPSRTPNYDSSKTPSYTNDFDTPTSPTY-DPEP-NEPYNNAPARTPAFDSGRT 339
Query: 114 SEHTSYSPLQASPSPSGYQSHSGVSSGSSSYLGATPSPSSEAAP--YGTPSPLSYSSRQ- 170
+ +Y SG ++ +G + +G T SP+ ++ P Y P+P + +
Sbjct: 340 PGYETYD--------SGSPTYDPEPTGETEDIGDTSSPTYDSPPHSYSVPTPGAMINPAT 391
Query: 171 ------------ASPFTPGTG--LDQYPTP------------------------------ 186
+P TPGTG DQY P
Sbjct: 392 PGAYHVDTPGPFVAPMTPGTGGAYDQYVAPSPYMGGGFEANNFNNAGGAIESIPEHFLVQ 451
Query: 187 -EWHTTDIEVRINENARDPEFRGQIGVIRHLGSGVCSVYLAEEERTLSIEAHELEPVMPQ 245
W +++ V I E+ DP + + +++++ G +Y+ + + L ++ +L P PQ
Sbjct: 452 GHWIMSNLYVVIKEH--DPRYNDREAIVQNVNDGKVDIYIPDLKCNLEVDFDQLSPTRPQ 509
Query: 246 PNDKVKVIVGEHKECTGVLLSVDNGEGVVK-LTEEDDVKMIDVKFLCK 292
P D +VI G +G ++S+D + +++ ++ D++ ++ CK
Sbjct: 510 PGDFARVIFGHDGGHSGQVVSMDGVDALIRSQSDISDMRSCNIGLCCK 557
>gi|222623750|gb|EEE57882.1| hypothetical protein OsJ_08547 [Oryza sativa Japonica Group]
Length = 1011
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 108/244 (44%), Gaps = 42/244 (17%)
Query: 52 PYKVGSRTPGGGATPLHDGSRTPGP---WDPSSTPARSIHNDAYPMDDSFNNSYPHTPGT 108
P++ R PG ATP+ +G RTP P W P S P R+ DA ++ +S + PGT
Sbjct: 705 PFQTPLRDPG--ATPVPNGMRTPMPSRAWAPMS-PPRNGWEDAV----TWESSPTYQPGT 757
Query: 109 MYGSSSEHTSYSPLQASPSP-SGYQSHSGVSSGSSSYLGATPSPSSEAAPYG---TPSPL 164
E +P+P SG+ GVS G +S G PS + P G TP+P
Sbjct: 758 PVPQPHE---------APTPGSGWAVTPGVSFGDAS--GKNPSSYATPTPSGQPMTPNPA 806
Query: 165 SY--SSRQASPFTPGTGLDQYPTP--------EWHTTDIEVRINENARDPEFRGQIGVIR 214
SY S+ P T G +P W D+ V + D GV++
Sbjct: 807 SYLPSTPGGQPMTLGYIEMDIMSPAIGEEGGRNWLLPDVLVNVLREGYDT----TCGVVK 862
Query: 215 H-LGSGVCSVYLAEEERTLSIEA--HELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGE 271
L G C V L I A +E E V P+ NDK+K++ G + TG LL VD +
Sbjct: 863 EVLPDGSCRVALGSSGSGDEITAFPNEFEVVKPKKNDKLKIMSGSWRGLTGKLLGVDGSD 922
Query: 272 GVVK 275
G+VK
Sbjct: 923 GIVK 926
>gi|159463654|ref|XP_001690057.1| global transcription factor [Chlamydomonas reinhardtii]
gi|158284045|gb|EDP09795.1| global transcription factor [Chlamydomonas reinhardtii]
Length = 1188
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 90/200 (45%), Gaps = 46/200 (23%)
Query: 122 LQASPSPSGYQSHSGVSSGSSSYLGA----TPSPSSEAAPYGTPSPLSYSSRQASPFTPG 177
+ A+P+P G +G + G+++ G P+P++ P TPS +Y TPG
Sbjct: 1003 VDAAPTPGGGHYEAGYTPGTNAATGTPGLTAPTPANAYTPAFTPSGHAY--------TPG 1054
Query: 178 TGLDQYPTPE----------WHTTDIEVRINENARDPEFRGQIGVIRHLGS-GVCSV--- 223
T + TP W + ++V G+ V+R GS G CSV
Sbjct: 1055 TPGLEAGTPAVVGVVEDFGTWASILVQV---------PGSGRYAVVRAAGSDGTCSVQPG 1105
Query: 224 -------YLAEEERTLSI-EAHELEPVMPQPNDKVKVIVGEHKEC---TGVLLSVDNGEG 272
+ A+ L +A L V P DKVKVI E ++ TG L+ +DN +G
Sbjct: 1106 NYAPDSGFSADASAALETHDARALAVVRPSKRDKVKVIKAESQDVLGVTGTLIGIDNADG 1165
Query: 273 VVKLTEEDDVKMIDVKFLCK 292
+VK +D+K++D+ FL K
Sbjct: 1166 IVKCDVSNDMKILDMTFLAK 1185
>gi|427796899|gb|JAA63901.1| Putative rna polymerase ii transcription elongation factor
dsif/supt5h/spt5, partial [Rhipicephalus pulchellus]
Length = 984
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/107 (49%), Positives = 62/107 (57%), Gaps = 32/107 (29%)
Query: 53 YKVGSRTP--GGGATPLHDGSRTP--GPWDP--SSTPARSIHNDAYPMDD-SFNNSY--- 102
Y+ GSRTP GGG TPLHDGSRTP G WDP S+TPAR+ +D Y +D+ S + SY
Sbjct: 851 YEAGSRTPHFGGGQTPLHDGSRTPVHGAWDPTASNTPARTELDD-YTLDEGSPSPSYQPA 909
Query: 103 ------------PHTPGT--MYGSSSEHTSYSP----LQASPSPSGY 131
P+TP T MYGS SYSP Q SPSP+GY
Sbjct: 910 TPGYQAPETPQGPYTPQTPGMYGSDH---SYSPSPTAYQPSPSPTGY 953
Score = 40.8 bits (94), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 40/58 (68%), Gaps = 6/58 (10%)
Query: 3 GGF--MSPRISSPMHPSGGRGGRGGGRGGHHGGNVRR----DRELIGKTIKITGGPYK 54
GG+ +SPRISSPMHPSGG GG G G G GG R D ELIG+TIKIT GPYK
Sbjct: 577 GGYTPLSPRISSPMHPSGGGGGGGRGGGFGGGGGRGRGGRRDSELIGQTIKITQGPYK 634
>gi|17861616|gb|AAL39285.1| GH15359p [Drosophila melanogaster]
Length = 462
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 91/181 (50%), Gaps = 27/181 (14%)
Query: 4 GFMSPRISSPMHPSGGRGGRGGGRGGHHGGNVRRDRELIGKTIKITGGPYKVGSRTPGGG 63
GFMSPRI SPMHPSGGRG RGG RGG G V RDRE++GKTIKI+GGPYK G
Sbjct: 287 GFMSPRIQSPMHPSGGRGARGGARGGRGGFRVTRDREILGKTIKISGGPYK-------GA 339
Query: 64 ATPLHDGSRTPGPWDPSSTPARSIHNDAYPMDDSFNNSYPHTPGTMYGSSSEHTSYSPLQ 123
+ D + ST +H + N+ + G + + S S
Sbjct: 340 VGIVKDAT--------ESTARVELHTSCQTISVDRNHI------AIVGVTGKEGSVSTYG 385
Query: 124 ASPSPS---GYQSHSGVSSGSSSYLGATPSPSSEA---APYGTPSPLSYSSRQASPFTPG 177
+P+ + G Q+ S ++GS + L + +P+ + PYGT +P++ + + G
Sbjct: 386 RTPARTPGYGAQTPSYTAAGSKTPLVGSQTPNWDTDTRTPYGTMTPIARWQHDTTSWRLG 445
Query: 178 T 178
+
Sbjct: 446 S 446
>gi|297823203|ref|XP_002879484.1| KOW domain-containing transcription factor family protein
[Arabidopsis lyrata subsp. lyrata]
gi|297325323|gb|EFH55743.1| KOW domain-containing transcription factor family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 978
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 109/251 (43%), Gaps = 45/251 (17%)
Query: 63 GATPLHDGSRTP------GPWDPSSTPARSIHNDAYPMDDSFNNSYPHTPGTMYGSSSEH 116
GATP+HDG RTP P+ P S P D++ + P + GT
Sbjct: 756 GATPIHDGMRTPMRGRAWNPYMPMSPPR-----------DNWEDGNPGSWGT-------- 796
Query: 117 TSYSPLQASPSPSGYQSHSGVSSGSSSYLGATPSPSSEAAPYGTPSPLSY--SSRQASPF 174
P +AS SG+ S + S S TP ++ A TPS SY ++ P
Sbjct: 797 ---GPYEASTPGSGWGSSTPSRSSYSD--AGTPINNANAPSPMTPSSASYLPTTPGGQPM 851
Query: 175 TPGTGLDQYPTPEWHTT--DIEVR----INENARDPEFRGQIGVIRH-LGSGVCSVYLAE 227
TPGT LD H D E R I N + GVIR L G C V L
Sbjct: 852 TPGTDLDVMS----HDLGGDAETRFVPGILVNVHKAGEDSKPGVIRDVLLDGSCVVALGH 907
Query: 228 --EERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEEDDVKMI 285
E T+ + + V P+ N++VK++ G++ TG ++ D +G+VKL E DVK++
Sbjct: 908 RGEGETIMATQNNVSLVCPKKNERVKILGGKYGGSTGKVIGEDGWDGIVKLDESLDVKIM 967
Query: 286 DVKFLCKYKPE 296
+ L K E
Sbjct: 968 KLAILAKLVHE 978
>gi|357438259|ref|XP_003589405.1| Global transcription factor group [Medicago truncatula]
gi|355478453|gb|AES59656.1| Global transcription factor group [Medicago truncatula]
Length = 359
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 82/167 (49%), Gaps = 28/167 (16%)
Query: 142 SSYLGATP----SPSSEAAPYGTPSPLSYSSRQASPFTPGTGLDQYPTPEW--------H 189
S YL +TP +PSS + GTP P TPG G +P
Sbjct: 203 SPYLPSTPGQPMTPSSASYLPGTPG--------GQPMTPGIGGLDVMSPVLGGDNEGPSF 254
Query: 190 TTDIEVRINENARDPEFRGQIGVIRHL---GSGVCSVYLAEEERTLSIEAHELEPVMPQP 246
DI V ++ + +GVI+ + GS ++ + T+S ++E+E V+P+
Sbjct: 255 MPDILVNVHRTREE-----SVGVIKEVLPDGSYRVALGSSGNGETISALSNEVEAVVPRK 309
Query: 247 NDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEEDDVKMIDVKFLCKY 293
+DK+K+I GE + TG L+ VD +G+VK+ + DVK++D+ L K
Sbjct: 310 SDKIKIIGGELRGSTGKLIGVDGTDGIVKVDDTLDVKILDLVILVKL 356
>gi|308477179|ref|XP_003100804.1| hypothetical protein CRE_15485 [Caenorhabditis remanei]
gi|308264616|gb|EFP08569.1| hypothetical protein CRE_15485 [Caenorhabditis remanei]
Length = 698
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 122/288 (42%), Gaps = 65/288 (22%)
Query: 58 RTPGGGA----TPLHDGSRTPGPWDPSSTPARSIHNDAYPMDDSFNNSYPHTPGTMYGSS 113
RTPG + TP +D S+TP + TP + D P ++ +NN+ TP G +
Sbjct: 418 RTPGYESLPSRTPNYDSSKTPSYTNDFDTPTSPTY-DPEP-NEPYNNAPARTPAFDSGRT 475
Query: 114 SEHTSYSPLQASPSPSGYQSHSGVSSGSSSYLGATPSPSSEAAP--YGTPSPLSYSSRQ- 170
+ +Y SG ++ +G + +G T SP+ ++ P Y P+P + +
Sbjct: 476 PGYETYD--------SGSPTYDPEPTGETEDIGDTSSPTYDSPPHSYSVPTPGAMINPAT 527
Query: 171 ------------ASPFTPGTG--LDQYPTP------------------------------ 186
+P TPG+G DQY P
Sbjct: 528 PGAYHVDTPGPFVAPMTPGSGGAYDQYVAPSPYMGGGFEANNFNNAGGAIESIPEHFLVQ 587
Query: 187 -EWHTTDIEVRINENARDPEFRGQIGVIRHLGSGVCSVYLAEEERTLSIEAHELEPVMPQ 245
W +++ V I E+ DP + + +++++ G +Y+ + + L ++ +L P PQ
Sbjct: 588 GHWIMSNLYVVIKEH--DPRYNDREAIVQNVNDGKVDIYIPDLKCNLEVDFDQLSPTRPQ 645
Query: 246 PNDKVKVIVGEHKECTGVLLSVDNGEGVVK-LTEEDDVKMIDVKFLCK 292
P D +VI G +G ++S+D + +++ ++ D++ ++ CK
Sbjct: 646 PGDFARVIFGHDGGHSGQVVSMDGVDALIRSQSDISDMRSCNIGLCCK 693
>gi|15236477|ref|NP_192576.1| KOW domain-containing protein [Arabidopsis thaliana]
gi|5731757|emb|CAB52558.1| putative protein [Arabidopsis thaliana]
gi|7267477|emb|CAB77961.1| putative protein [Arabidopsis thaliana]
gi|21689639|gb|AAM67441.1| unknown protein [Arabidopsis thaliana]
gi|332657231|gb|AEE82631.1| KOW domain-containing protein [Arabidopsis thaliana]
Length = 141
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 2/109 (1%)
Query: 187 EWHTTDIEVRINENARDPEFRGQIGVIRHLGSGVCSVYLAE--EERTLSIEAHELEPVMP 244
E+ D+EVR + ++GVIR + G+C V L E T+ + + ELE V P
Sbjct: 30 EYSDEDVEVRFMPDILVTVHNSEVGVIRDVSDGMCKVSLGSGGEGDTIMVPSSELEIVRP 89
Query: 245 QPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEEDDVKMIDVKFLCKY 293
+ +D VK++ G + T L+ +D + +VK+ DVK++D+ L K+
Sbjct: 90 RKSDHVKILGGSYLGLTCKLIGIDGLDAIVKIDGNLDVKILDLALLAKF 138
>gi|186505223|ref|NP_180968.2| Transcription elongation factor Spt5 [Arabidopsis thaliana]
gi|374095446|sp|O80770.2|SPT52_ARATH RecName: Full=Putative transcription elongation factor SPT5 homolog
2
gi|330253842|gb|AEC08936.1| Transcription elongation factor Spt5 [Arabidopsis thaliana]
Length = 989
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 116/259 (44%), Gaps = 61/259 (23%)
Query: 63 GATPLHDGSRTP------GPWDPSSTPARSIHNDAYPMDDSFNNSYPHTPGTMYGSSSEH 116
GATP+HDG RTP P+ P S P D++ + P + GT
Sbjct: 767 GATPIHDGMRTPMRGRAWNPYMPMSPPR-----------DNWEDGNPGSWGT-------- 807
Query: 117 TSYSPLQASPSPSGYQSHSGVSSGSSSYLGA-TPSPSSEAAPYGTPSPLSYSSRQASPFT 175
SP +A+ S + S + G SSY A TP ++ A PSP++ SS P T
Sbjct: 808 ---SPYEAATPGSDWGSST---PGRSSYRDAGTPINNANA-----PSPMTPSSTSYLPTT 856
Query: 176 PGTGLDQYPTPEWHTTDIEVRINENARDPEFR---GQI------------GVIRH-LGSG 219
PG Q TP TD++V + D E R G + GVIR L G
Sbjct: 857 PGG---QAMTP---GTDLDVMSLDIGGDAETRFIPGILVNVHKAGEDRNPGVIRDVLPDG 910
Query: 220 VCSVYLAE--EERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLT 277
C V L E T+ +++ V P+ N++VK++ G++ T ++ D +G+VKL
Sbjct: 911 SCVVALGHRGEGETIRATQNKVSLVCPKKNERVKILGGKYCGSTAKVIGEDGQDGIVKLD 970
Query: 278 EEDDVKMIDVKFLCKYKPE 296
E D+K++ + L K E
Sbjct: 971 ESLDIKILKLTILAKLVHE 989
>gi|193606001|ref|XP_001947840.1| PREDICTED: transcription elongation factor SPT5-like [Acyrthosiphon
pisum]
Length = 919
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 61/110 (55%), Gaps = 18/110 (16%)
Query: 53 YKVGSRTPG-GGATPLHDGSRTPG-PWDPSS--TPARSIHNDA-YPMDDSFNNSYPHTPG 107
Y+VG+RTP G TP HDGS+TP WDP+S T R D YP+ + S+ +P
Sbjct: 799 YEVGNRTPNFGSTTPSHDGSKTPTHAWDPASGYTFTRVTDEDLEYPLGS--DTSFGQSPS 856
Query: 108 TMYGSSSEHTSYSPLQASPSPSGYQSHSGVSSGSSSYLGATPSPSSEAAP 157
T+YGSS SYSP Q +PSG S +SSY+ TPSP +P
Sbjct: 857 TLYGSSVH--SYSPYQ-ELTPSGCNS-------TSSYIN-TPSPIDTDSP 895
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 40/81 (49%), Gaps = 12/81 (14%)
Query: 4 GFMSPRISSPMHPSGGRGGRGGGR------GGHHGGNVRRDRELIGKTIKITGGPYK--- 54
GF SP+ SP + G+ G G G+ GG GG V+RD LIG+TI+I GPYK
Sbjct: 667 GFSSPQSMSPWRSTFGQLGVGIGKETFVGTGGRFGG-VQRDIGLIGQTIRIIVGPYKGDV 725
Query: 55 --VGSRTPGGGATPLHDGSRT 73
V T LH +T
Sbjct: 726 GIVKDATECTARVELHSSCQT 746
>gi|413944024|gb|AFW76673.1| hypothetical protein ZEAMMB73_018684 [Zea mays]
Length = 770
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 91/191 (47%), Gaps = 28/191 (14%)
Query: 125 SPSP-SGYQSHSGVSSGSS-----SYLGATPSPSSEAAPYG---TPSPLSY--SSRQASP 173
+P+P SG+ + GVS + +Y A PSP + P G TP+ SY + P
Sbjct: 584 APTPGSGWANTPGVSFNDAPTPRDNYANA-PSPYVPSTPVGQPMTPNSASYLPGTPGGQP 642
Query: 174 FTPG-TGLDQYP-------TPEWHTTDIEVRINENARDPEFRGQIGVIRH-LGSGVCSVY 224
TPG G+D W D+ V + D GV+R LG G C V
Sbjct: 643 MTPGNAGMDMMSPIIGGEGEATWLLPDVLVNVLSGGDDGP-----GVVREVLGDGSCRVA 697
Query: 225 LAEEER--TLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEEDDV 282
L +++ +E+E + P+ +DK+K++ G + TG L+ +D +G+V+L + +V
Sbjct: 698 LGSSGNGDMVTVLPNEVEVIRPKKSDKIKILNGSFRGHTGKLIGIDGSDGIVRLDDTYEV 757
Query: 283 KMIDVKFLCKY 293
K++D+ L K
Sbjct: 758 KILDMVILAKL 768
>gi|268536628|ref|XP_002633449.1| C. briggsae CBR-SPT-5 protein [Caenorhabditis briggsae]
Length = 1214
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 119/278 (42%), Gaps = 64/278 (23%)
Query: 65 TPLHDGSRTPGPWDPSSTPARSIHNDAYPMDDSFNNSYPHTPGTMYGSSSEHTSY---SP 121
TP +D S+TP + TP + + P D ++NN+ TPG G + + +Y SP
Sbjct: 949 TPSYDSSKTPAYGNDYETPMSPTY-EPEPAD-TYNNAPARTPGFDSGRTPGYETYDSGSP 1006
Query: 122 LQASPSPSGYQSHSGVSSGSSSYLGATPSPSSEAAP--YGTPSPLSYSSRQ--------- 170
P P+ +G+ +G T SP ++ P Y P+P + +
Sbjct: 1007 TY-DPEPA---------AGAEDDIGDTSSPRYDSPPLSYSAPTPGAMINPATPGAYHVNT 1056
Query: 171 ----ASPFTPGTG--LDQYPTPE-----------------------------WHTTDIEV 195
+P TPG+G DQY P W ++ V
Sbjct: 1057 PGPFVAPMTPGSGGGYDQYVAPSPYMGGGYDTNNYSSAGEEKIPDHFLSQGHWVMANLYV 1116
Query: 196 RINENARDPEFRGQIGVIRHLGSGVCSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVG 255
I E+ DP + + +++++ +G +Y+ + + L +E +++P P D +VI G
Sbjct: 1117 TIKEH--DPRYNDREAIVQNVENGRVEIYVPDLKINLEVEFDQIQPTKPAAGDYARVIFG 1174
Query: 256 EHKECTGVLLSVDNGEGVVK-LTEEDDVKMIDVKFLCK 292
E +G ++S + + +++ +T+ D++ I++ CK
Sbjct: 1175 EDGGHSGQVVSKEGCDALIRSMTDVRDMRSINIGNCCK 1212
>gi|218191659|gb|EEC74086.1| hypothetical protein OsI_09110 [Oryza sativa Indica Group]
Length = 988
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 114/277 (41%), Gaps = 57/277 (20%)
Query: 52 PYKVGSRTPGGGATPLHDGSRTPGP---WDPSSTPARSIHNDAYPMDDSFNNSYPHTPGT 108
P++ R PG ATP+ +G RTP P W P S P R+ DA + S +Y + G
Sbjct: 732 PFQTPLRDPG--ATPVPNGMRTPMPSRAWAPMS-PPRNSWEDAVTWESS--PTYQISFGL 786
Query: 109 MYGSSSEHTSYSPLQ---------ASPSP-SGYQSHSGVSSGSSSYLGATPSPSSEAAPY 158
S LQ +P+P SG+ GVS G +S G PS + P
Sbjct: 787 AINGKFLSLYISLLQPGTPVPQPHEAPTPGSGWAVTPGVSFGDAS--GKNPSSYATPTPS 844
Query: 159 G---TPSPLSY--SSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVI 213
G TP+P SY S+ P T G IE+ I A E G+ G
Sbjct: 845 GQPMTPNPASYLPSTPGGQPMTLGY--------------IEMDIMSPAIGEE-GGRTGFY 889
Query: 214 RHLGS------------GVCSVYLAEEERTLSIEA--HELEPVMPQPNDKVKVIVGEHKE 259
+ S G C V L I A +E E V P+ NDK+K++ G +
Sbjct: 890 QMFWSMCSGKVMIPPADGSCRVALGSSGSGDEITAFPNEFEVVKPKKNDKLKIMSGSWRG 949
Query: 260 CTGVLLSVDNGEGVVK---LTEEDDVKMIDVKFLCKY 293
TG LL VD +G+VK L D K++D L K
Sbjct: 950 LTGKLLGVDGSDGIVKVDGLETTDQTKILDTAILGKL 986
>gi|308476957|ref|XP_003100693.1| CRE-SPT-5 protein [Caenorhabditis remanei]
gi|308264505|gb|EFP08458.1| CRE-SPT-5 protein [Caenorhabditis remanei]
Length = 1210
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 119/288 (41%), Gaps = 65/288 (22%)
Query: 58 RTPGGGA----TPLHDGSRTPGPWDPSSTPARSIHNDAYPMDDSFNNSYPHTPGTMYGSS 113
RTPG + TP +D +TP + TP + D P + +NN+ TP G +
Sbjct: 930 RTPGYESLPSRTPNYDSGKTPSYTNDFDTPTSPTY-DPEPHE-PYNNAPARTPAFDSGRT 987
Query: 114 SEHTSYSPLQASPSPSGYQSHSGVSSGSSSYLGATPSPSSEAAP--YGTPSPLSYSSRQ- 170
+ +Y SG ++ +G + +G T SP+ ++ P Y P+P + +
Sbjct: 988 PGYETYD--------SGSPTYDPEPTGETEDIGDTSSPTYDSPPHSYSVPTPGAMINPAT 1039
Query: 171 ------------ASPFTPGTG--LDQYPTP------------------------------ 186
+P TPGTG DQY P
Sbjct: 1040 PGAYHVDTPGPFVAPMTPGTGGAYDQYVAPSPYMGGGFEANNFNNAGGAIESIPEHFLVQ 1099
Query: 187 -EWHTTDIEVRINENARDPEFRGQIGVIRHLGSGVCSVYLAEEERTLSIEAHELEPVMPQ 245
W +++ V I E+ DP + + ++++ G +Y+ + + L ++ +L P PQ
Sbjct: 1100 GHWIMSNLYVVIKEH--DPRYNDREAIVQNANDGKVDIYIPDLKCNLEVDFDQLSPTRPQ 1157
Query: 246 PNDKVKVIVGEHKECTGVLLSVDNGEGVVK-LTEEDDVKMIDVKFLCK 292
P D +VI G +G ++S+D + +++ ++ D++ ++ CK
Sbjct: 1158 PGDFARVIFGHDGGHSGQVVSMDGVDALIRSQSDISDMRSCNIGLCCK 1205
>gi|219122476|ref|XP_002181570.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406846|gb|EEC46784.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1057
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 99/245 (40%), Gaps = 27/245 (11%)
Query: 52 PYKVGSRTPG-GGATPLHDGSRTPGPWDPSSTPARSIHNDAYPMDDSFNNSYPHTPGTMY 110
P+ +TP GGATP+H G+ D P ++ DA DD + + T +
Sbjct: 836 PFVAAGQTPMHGGATPMHGGALDGDTSDEVWQPGGAVDQDAVKDDDGWGS----TANDGF 891
Query: 111 GSSSEHTSYSPLQASPSPSGYQSHSGVSSGSSSYLGATPSPSSEAAPYGTPSPLSYSSRQ 170
GS + S S P G+ ++ V + PS + R+
Sbjct: 892 GSPKDGDSDGWGSTSDQPKGWGTYPAVKDNTVKK--EVPSTNGNGV-----------KRE 938
Query: 171 ASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGVCSVYLAEEER 230
+ LD TP W+ V + ++D + GVI+ + + + E++
Sbjct: 939 QAKREMEAELDTEETPGWYME--RVCVQNKSKDKQ-----GVIKEIDPATKAAVVEYEDQ 991
Query: 231 TL-SIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEEDDVKMIDVKF 289
T ++ A EL V P +D V V G G L+ VD + ++K D+ K++++ F
Sbjct: 992 TFETLRASELAMVPPSEHDTVLVTGGNEIGLEGSLVCVDGSDAILK-DANDEFKIVEISF 1050
Query: 290 LCKYK 294
L K K
Sbjct: 1051 LAKVK 1055
>gi|326433915|gb|EGD79485.1| hypothetical protein PTSG_12984 [Salpingoeca sp. ATCC 50818]
Length = 1092
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 122/267 (45%), Gaps = 41/267 (15%)
Query: 52 PYKVGSRTPGGGA-TPLHDGSRTPG------PWDPS--STPARSI---HNDAYPMDDSFN 99
P+ GS TP GA TP GSRTPG W+P+ +TPA + A+ ++
Sbjct: 833 PHYTGSETPRLGAETP---GSRTPGYDYNDSAWNPNVPNTPAPDTPAGRSPAFQQTAEWD 889
Query: 100 NS-YPHTPGTMYGSSSEHTSYSPLQASPSPSGYQSHSGVS--SGSSSYLGATPSPSSEAA 156
S P ++ + +P Q P+ G +S++ + S Y G+TP+ +
Sbjct: 890 VSDVTSEPASVRAETPHAGPATPGQ--PNTPGDRSYNAAFTPAWESGYSGSTPTAGTPG- 946
Query: 157 PYGTPS-PLSYSSRQASPFTPGTGLDQYPTPE----------WHTTDIEVRINENARDPE 205
+G P+ P + S+ P TPGT + P W + VR+ +
Sbjct: 947 -FGAPATPGTGSTPGMPPATPGTHMPATPGEAVGTSGAGGAPWLVPTVSVRVVSS----- 1000
Query: 206 FRGQIGVIRHLGSGVCSVYLAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLL 265
GQ G I ++ G SV L + T + A +L P+ P ND+V V+ G+ + G+L+
Sbjct: 1001 --GQQGTISNVDGGSVSVALDDGSAT-TAPAEDLTPIDPVKNDRVYVMEGDQQGMRGMLV 1057
Query: 266 SVDNGEGVVKLTEEDDVKMIDVKFLCK 292
S+D EGVVK + +K+I + L +
Sbjct: 1058 SIDGVEGVVKFFDPPSLKIIPMAQLTR 1084
>gi|384499127|gb|EIE89618.1| hypothetical protein RO3G_14329 [Rhizopus delemar RA 99-880]
Length = 1029
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 102/267 (38%), Gaps = 61/267 (22%)
Query: 53 YKVGSRTPG---GGATP---LHDGSRTPGPWDP-SSTPARSIHNDAYPMDDSFNNSYPHT 105
+ GS+TP G TP +DG RTP WD S TP +DA+ S N+ P
Sbjct: 756 WNSGSKTPAWNSGARTPNPYANDGGRTPA-WDSGSKTPM--WRSDAWSSSTSLNHDKP-I 811
Query: 106 PGTMYGSSSEHTSYSPLQASPSPSGYQSHSGVSSGSSSYLGATPS------------PSS 153
T S+ Y P + SSS++ TP P +
Sbjct: 812 SATNSSSNHNSNRYDDANIPPQ-----------TPSSSWIAPTPHYESVPTPGAGFIPPT 860
Query: 154 EAAPYGTPSPLSYSSRQASPFTPGT----GLDQYP----------------TPEWHTTDI 193
A P+P +Y + + F P T L Q P +W DI
Sbjct: 861 PGAFMSAPTPAAYEAGTSGNFVPATPAESALPQTPFMPTGGDYRYVEEVDNEEDWPIEDI 920
Query: 194 EVRINENARD--PEFRGQIGVIRHLG--SGVCSVYLAEEERTLSIEAHELEPVMPQPNDK 249
EV+ RD RGQ+ I + S C V L + I +EP P +
Sbjct: 921 EVKF---IRDEGAARRGQLASIVSVDIISKRCVVNLYSTSEKIDIPFDCIEPARPNKKEN 977
Query: 250 VKVIVGEHKECTGVLLSVDNGEGVVKL 276
V++I GEH+ G L+ VD +G+V+L
Sbjct: 978 VRIIKGEHRGELGNLIGVDAQDGIVRL 1004
>gi|301115069|ref|XP_002999304.1| transcription elongation factor SPT5, putative [Phytophthora
infestans T30-4]
gi|262111398|gb|EEY69450.1| transcription elongation factor SPT5, putative [Phytophthora
infestans T30-4]
Length = 1142
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 188 WHTTDIEVRINENARDPEFRGQIGVIRHLGSGVCSVYLAEEERTLSIEAHELEPVMPQPN 247
W +EV + E G +GVI + SG CS+ + + R +++ +++ PV+P+
Sbjct: 1003 WKMKGVEVEVIAG----EHNGSVGVITSVSSGSCSIDV--DGRVITVSFNDVRPVVPEKQ 1056
Query: 248 DKVKVIVGEHKECTGVLLSVDNGEGVVKLTEEDDVKMIDVKFLCK 292
D V ++ G+ G L+ D +G+VK+ ++K+ + L K
Sbjct: 1057 DTVIILSGDEAGTRGSLIGTDASDGIVKVDGGSEIKIYAIASLAK 1101
>gi|361068961|gb|AEW08792.1| Pinus taeda anonymous locus CL1640Contig1_03 genomic sequence
gi|361068963|gb|AEW08793.1| Pinus taeda anonymous locus CL1640Contig1_03 genomic sequence
gi|383169972|gb|AFG68197.1| Pinus taeda anonymous locus CL1640Contig1_03 genomic sequence
gi|383169974|gb|AFG68198.1| Pinus taeda anonymous locus CL1640Contig1_03 genomic sequence
gi|383169976|gb|AFG68199.1| Pinus taeda anonymous locus CL1640Contig1_03 genomic sequence
gi|383169978|gb|AFG68200.1| Pinus taeda anonymous locus CL1640Contig1_03 genomic sequence
gi|383169980|gb|AFG68201.1| Pinus taeda anonymous locus CL1640Contig1_03 genomic sequence
gi|383169982|gb|AFG68202.1| Pinus taeda anonymous locus CL1640Contig1_03 genomic sequence
gi|383169984|gb|AFG68203.1| Pinus taeda anonymous locus CL1640Contig1_03 genomic sequence
gi|383169986|gb|AFG68204.1| Pinus taeda anonymous locus CL1640Contig1_03 genomic sequence
gi|383169988|gb|AFG68205.1| Pinus taeda anonymous locus CL1640Contig1_03 genomic sequence
gi|383169990|gb|AFG68206.1| Pinus taeda anonymous locus CL1640Contig1_03 genomic sequence
gi|383169992|gb|AFG68207.1| Pinus taeda anonymous locus CL1640Contig1_03 genomic sequence
gi|383169994|gb|AFG68208.1| Pinus taeda anonymous locus CL1640Contig1_03 genomic sequence
gi|383169996|gb|AFG68209.1| Pinus taeda anonymous locus CL1640Contig1_03 genomic sequence
gi|383169998|gb|AFG68210.1| Pinus taeda anonymous locus CL1640Contig1_03 genomic sequence
gi|383170000|gb|AFG68211.1| Pinus taeda anonymous locus CL1640Contig1_03 genomic sequence
gi|383170002|gb|AFG68212.1| Pinus taeda anonymous locus CL1640Contig1_03 genomic sequence
gi|383170004|gb|AFG68213.1| Pinus taeda anonymous locus CL1640Contig1_03 genomic sequence
Length = 68
Score = 50.8 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 43/66 (65%)
Query: 227 EEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEEDDVKMID 286
++ ++ A E++ + P+ +DK+K+I GE + TG L+ +D +G+VK+ E D+K++D
Sbjct: 1 DDGEVVTAAASEIDIIPPKKSDKIKIINGEQRGGTGKLIGIDGADGIVKMDETLDIKILD 60
Query: 287 VKFLCK 292
+ L K
Sbjct: 61 MSNLAK 66
>gi|348683762|gb|EGZ23577.1| hypothetical protein PHYSODRAFT_484339 [Phytophthora sojae]
Length = 1104
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 53/106 (50%), Gaps = 6/106 (5%)
Query: 188 WHTTDIEVRINENARDPEFRGQIGVIRHLGSGVCSVYLAEEERTLSIEAHELEPVMPQPN 247
W +EV + E G +G I ++ G CS+ + + R +++ +++ PV+P+
Sbjct: 1003 WKMKGVEVEVIAG----ELNGSVGAITNVSGGSCSIDV--DGRVITVSLNDVRPVVPEKQ 1056
Query: 248 DKVKVIVGEHKECTGVLLSVDNGEGVVKLTEEDDVKMIDVKFLCKY 293
D V ++ G+ G L+ D +G+VK+ ++K+ + L K
Sbjct: 1057 DTVIILSGDEAGTRGSLIGTDASDGIVKVDGGSEIKIYAIASLAKI 1102
>gi|328869147|gb|EGG17525.1| transcription initiation factor Spt5 [Dictyostelium fasciculatum]
Length = 1072
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 108/299 (36%), Gaps = 84/299 (28%)
Query: 56 GSRTPGGGATPLHDGSRTP----------GPWDPSSTPARSIHNDAYPMDD--------- 96
SRTP P RTP PW S+TP RS + + DD
Sbjct: 789 ASRTPMREENPGMTPMRTPMRSNNNSGHHDPWSSSATPMRSTGSSNWYSDDMPSHGSGSS 848
Query: 97 ----------------------------SFNNSYPHTPGTMYGSSSEHTSYSPLQASPSP 128
S++N P P T Y+ + P+P
Sbjct: 849 GGHQSNNSNNNNNNNNNNNNNDWSTPQTSYSNFSPFNPSTPGSDMHNRHDYTTPISIPTP 908
Query: 129 SGYQSHSGVSSGSSSYLGATPSPSS----EAAPYGTP-SPLSYSSRQ--ASPFTPGTGLD 181
Y+ TP+PS+ + P P SP + + Q A+P TP T D
Sbjct: 909 QSYE---------------TPTPSNYHYDQQTPLDVPQSPFTPHAPQTPATPSTPSTNED 953
Query: 182 QYPTPE---WHTTDIEVRINENARDPEFRGQIGVIRHLGSGVCSV-YLAEEERTLSIEAH 237
Q + W +V N G +GV+ +G CSV +L+ ++ +I
Sbjct: 954 QEDEIDNSPWQGIGFQVTYKAN-------GDLGVVTTNSNGFCSVDFLSTNKKMSNIAQS 1006
Query: 238 ELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGE----GVVKLTEEDDVKMIDVKFLCK 292
ELE V+P + V ++ G H TG L + + G+VK+ D K++ + L K
Sbjct: 1007 ELELVVPSKKELVVILRGPHATQTGSLFVITTAQSYSSGIVKMDTNLDFKVLKMANLGK 1065
>gi|223996747|ref|XP_002288047.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220977163|gb|EED95490.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 1158
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 101/237 (42%), Gaps = 26/237 (10%)
Query: 62 GGATPLHDG-----SRTPGPWDPSSTPARSIHNDAYPMDDSFNNSYPHTPGTMYGSSSEH 116
GGATP+HDG S + G D P SI +A +D+S N+ + G +
Sbjct: 938 GGATPMHDGYGATPSHSSGMSDDIWRPGGSIDREAEGVDESMNDGWGSGNGNVIKKQENQ 997
Query: 117 TSYSPLQASPSPSGYQSHSGVSSGSSSYLGATPSPSS-EAAPYGTPSPLSYSSRQASPFT 175
S + + SG+ SS + G+T +P++ EA P Y + T
Sbjct: 998 FGDS---SGDAVSGW-------GDSSDHGGSTWTPNTGEAESMVKHDPDGYGNDAGGMDT 1047
Query: 176 PGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGVCSVYLAEEERTLSIE 235
G + W + V++ +N VI+ + +G +V E++ TL++
Sbjct: 1048 AMEGSGEEAAV-WFMERVCVQLKKNTAQA-------VIKEI-NGSMAVVEMEDKSTLTVR 1098
Query: 236 AHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEEDDVKMIDVKFLCK 292
E+ V PQ +D V V G G L+ +D + ++K + E + K++D L K
Sbjct: 1099 NGEVSMVPPQEHDMVLVTGGADVGVEGELVCIDGTDAILKESNE-NFKIVDFIHLAK 1154
>gi|325181255|emb|CCA15669.1| transcription elongation factor SPT5 putative [Albugo laibachii Nc14]
gi|325181812|emb|CCA16267.1| transcription elongation factor SPT5 putative [Albugo laibachii Nc14]
Length = 1095
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 98/234 (41%), Gaps = 26/234 (11%)
Query: 73 TPG--PWDPSSTPARSIHNDAYPM-DDSFNNSYPHTPGTMYGSSSEHTSYSPLQASPSPS 129
TPG P P P H A P + P TPG +G ++ +P S +
Sbjct: 873 TPGLHPMTPGLHPTTPAHLSATPAHTREVMGTEPRTPG--FGVATPGIGLNPTTPSLATP 930
Query: 130 GYQSH--------SGVSSGSSSYLGATP-SPSSEAAP-YGTPSPLSYSSRQASPFTPGTG 179
GYQ + + +++ +SS L ATP PS A G P + YS + P +
Sbjct: 931 GYQHNPTTPGLYRTPMNALASSELVATPGVPSGLVANGAGMPVTMPYSRQAHEILNPISN 990
Query: 180 LDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGVCSVYLAEEERTLSIEAHEL 239
W +EVR+ E IGVI + V + T +++ +
Sbjct: 991 -----EVTWKMKGVEVRVAIT----ETNVSIGVIASVNGDSLGVEIDGNVHTYNVDC--V 1039
Query: 240 EPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEEDDVKMIDVKFLCKY 293
+PV+P+ D V ++ GE TG L+ D +G+VK+ + D+K+ + L K
Sbjct: 1040 QPVLPEKQDTVIILSGEEAGQTGSLIGTDGADGIVKVDGDADIKIYPLNSLAKL 1093
>gi|242063212|ref|XP_002452895.1| hypothetical protein SORBIDRAFT_04g034550 [Sorghum bicolor]
gi|241932726|gb|EES05871.1| hypothetical protein SORBIDRAFT_04g034550 [Sorghum bicolor]
Length = 119
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 219 GVCSVYL--AEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKL 276
G C V L E L + A+ELE V P+ N+K+K++ G + TG L+ +D +G+VK+
Sbjct: 41 GSCRVSLGPLGEGDELIVTANELEVVRPKKNEKLKIMNGPLRGATGKLIGLDGSDGIVKV 100
Query: 277 TEEDDVKMIDVKFLCKY 293
DVK++D+ L K
Sbjct: 101 EGSLDVKIVDMAILGKL 117
>gi|149432867|ref|XP_001513022.1| PREDICTED: transcription elongation factor SPT5 isoform 1
[Ornithorhynchus anatinus]
Length = 882
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 69/183 (37%), Gaps = 88/183 (48%)
Query: 2 TGGF--MSPRISSPMHPSGGRGGRGGGRGGHHGGNVRR----DRELIGKTIKITGGPYK- 54
GGF MSPRISSPMHPS G G G GG GG R D +LIG+T++I+ GPYK
Sbjct: 658 VGGFAPMSPRISSPMHPSAGGQRGGFGSGGSSGGMSRGRGRRDNDLIGQTVRISQGPYKG 717
Query: 55 ---------------------------------VGSRTPG-------------------- 61
VGSR PG
Sbjct: 718 YIGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSAYGRTPMYGSQTPMYG 777
Query: 62 --------GGATPLHDGSRTP------------------GPWDPS--STPARSIHNDAYP 93
G TPLHDGSRTP G WDP+ +TP+R+ Y
Sbjct: 778 SGSRTPMYGSQTPLHDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYDYG 837
Query: 94 MDD 96
DD
Sbjct: 838 FDD 840
>gi|358053888|dbj|GAB00021.1| hypothetical protein E5Q_06723 [Mixia osmundae IAM 14324]
Length = 1362
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 84/228 (36%), Gaps = 47/228 (20%)
Query: 109 MYGSSSEHTSYSPLQASPSPSGYQSHSGVSSGSSSYLGATPSPSSEA--APYGTPSPLS- 165
Y +H + A+ +P Y +S S Y TP+ A PY P+P +
Sbjct: 1140 FYDEPEQHVAKQITAANTAPLAYSRWGAQASAPSPYTAPTPAAQRHAYDTPYNAPTPGNA 1199
Query: 166 --------------------------------YSSRQASPFTPGTGLDQYPTPEWHTTDI 193
Y SRQ P P + L P+ +W T +
Sbjct: 1200 LRGYEAPSPNVYRHTDGSTGYYAADTPAHHSGYGSRQ-QPAAPRSAL---PS-DWAETGL 1254
Query: 194 EVR------INENARDPEFRGQIGVIRHLGSGVCSVYLAEEERTLSIEAHELEPVMPQPN 247
EV I A D ++ G+ G VC V + R I + +L+PV+P+
Sbjct: 1255 EVVLMPGSGIYRGAYDRQYGVVSGIASLQGQQVCEVTFPDGNRVPDIPSRQLQPVLPRKG 1314
Query: 248 DKVKVIVGEHKECTG-VLLSVDNGEGVVKLTEEDDVKMIDVKFLCKYK 294
D+V VI G + G V +D G ++ +I+ + +CK +
Sbjct: 1315 DRVIVIGGNDRHSRGSVSTDLDAGAFMMIFDVSQAQTVINAELVCKLR 1362
>gi|345309762|ref|XP_003428879.1| PREDICTED: transcription elongation factor SPT5 isoform 2
[Ornithorhynchus anatinus]
Length = 878
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 69/183 (37%), Gaps = 88/183 (48%)
Query: 2 TGGF--MSPRISSPMHPSGGRGGRGGGRGGHHGGNVRR----DRELIGKTIKITGGPYK- 54
GGF MSPRISSPMHPS G G G GG GG R D +LIG+T++I+ GPYK
Sbjct: 654 VGGFAPMSPRISSPMHPSAGGQRGGFGSGGSSGGMSRGRGRRDNDLIGQTVRISQGPYKG 713
Query: 55 ---------------------------------VGSRTPG-------------------- 61
VGSR PG
Sbjct: 714 YIGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSAYGRTPMYGSQTPMYG 773
Query: 62 --------GGATPLHDGSRTP------------------GPWDPS--STPARSIHNDAYP 93
G TPLHDGSRTP G WDP+ +TP+R+ Y
Sbjct: 774 SGSRTPMYGSQTPLHDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYDYG 833
Query: 94 MDD 96
DD
Sbjct: 834 FDD 836
>gi|330798439|ref|XP_003287260.1| hypothetical protein DICPUDRAFT_47274 [Dictyostelium purpureum]
gi|325082720|gb|EGC36193.1| hypothetical protein DICPUDRAFT_47274 [Dictyostelium purpureum]
Length = 991
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 107/253 (42%), Gaps = 38/253 (15%)
Query: 72 RTPGPWDPS------STPARSIHNDAYPMDDSFNNSYP-------------HTPGTMYGS 112
RTP DPS +TPARS ++D + M +S + TPGT Y
Sbjct: 742 RTPMREDPSQTPMRMNTPARSNNHDPWAMRESSDYYSSSSSSNNSMNNNDDTTPGTNYSL 801
Query: 113 SSEHTSYSPLQAS----PSPSGYQSHSGVSSGSSSYLGATP---SPSSEAAPYGTP-SPL 164
S +T +PL + + + Y + + S S +Y TP S S+ P+ P SP
Sbjct: 802 YSPYTPTTPLDGNRHGESTYTPYDRSTPMGSYSHNYDNPTPSYLSNYSDHTPHEIPSSPY 861
Query: 165 SYSSRQASPFTPGTGLD---QYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHLGSGVC 221
+ + +P TP +G D + P W T+IEV +N + V+ + C
Sbjct: 862 TPHNIPQTPATPNSGEDHDEEVEQPFWSGTNIEVIYKDNGK------HAVVLANTTESTC 915
Query: 222 SVYLAEEERTL-SIEAHELEPVMPQPNDKVKVIVGEHKECTGVLLSV-DNGEGVVKLTEE 279
+ + + + ++ +L V P D V +I G+ TG L + + G++K+
Sbjct: 916 KIEILDTKEVFDNVHQSQLTLVSPLKKDHVVIIKGKLTGYTGTLFILTEENTGIIKMDSN 975
Query: 280 DDVKMIDVKFLCK 292
D K+ + + K
Sbjct: 976 YDFKVFKMSYFGK 988
>gi|125543149|gb|EAY89288.1| hypothetical protein OsI_10789 [Oryza sativa Indica Group]
Length = 428
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 6/106 (5%)
Query: 188 WHTTDIEVRI-NENARDPEFRGQIGVIRHLGSGVCSVYLAEE-ERTLSIEAHELEPVMPQ 245
W +DI+VR+ +E + + V+ +G C + + ++ E +E LE V+P+
Sbjct: 310 WLHSDIKVRVVSERLSKKLYLKKGRVLDVVGPTTCDIIMDDQSELVQGVEQDMLETVLPR 369
Query: 246 PNDKVKVIVGEHKECTGVLLSVDNGE--GVVKLTEEDDVKMIDVKF 289
N V ++ GEHK G L+ ++ E GVV+L+ D MI VK+
Sbjct: 370 TNGLVLLLAGEHKGLCGHLVEKNSEEETGVVELSNTKD--MIRVKY 413
>gi|357120194|ref|XP_003561814.1| PREDICTED: protein MOS2-like [Brachypodium distachyon]
Length = 487
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 2/104 (1%)
Query: 188 WHTTDIEVRI-NENARDPEFRGQIGVIRHLGSGVCSVYLAE-EERTLSIEAHELEPVMPQ 245
W ++I VR+ NE + + ++ +G C + + + E +E LE V+P+
Sbjct: 369 WLQSNIRVRVVNERFSKRLYLMKGKIVDVVGPTTCDIIMDDGSELVQGVEQDMLETVLPR 428
Query: 246 PNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEEDDVKMIDVKF 289
N +V V+ G+HK G L+ ++ E + + D MI VK+
Sbjct: 429 TNGRVLVLCGKHKGVYGRLVEKNSAEETGLVEDADSKGMIRVKY 472
>gi|297600671|ref|NP_001049580.2| Os03g0253500 [Oryza sativa Japonica Group]
gi|108707216|gb|ABF95011.1| G-patch domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|125579838|gb|EAZ20984.1| hypothetical protein OsJ_36635 [Oryza sativa Japonica Group]
gi|255674377|dbj|BAF11494.2| Os03g0253500 [Oryza sativa Japonica Group]
Length = 428
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 6/106 (5%)
Query: 188 WHTTDIEVRI-NENARDPEFRGQIGVIRHLGSGVCSVYLAEE-ERTLSIEAHELEPVMPQ 245
W +DI+VR+ +E + + V+ +G C + + ++ E +E LE V+P+
Sbjct: 310 WLHSDIKVRVVSERLSKKLYLKKGRVLDVVGPTTCDIIMDDQSELVQGVEQDMLETVLPR 369
Query: 246 PNDKVKVIVGEHKECTGVLLSVDNGE--GVVKLTEEDDVKMIDVKF 289
N V ++ GEHK G L+ ++ E GVV+L+ D MI VK+
Sbjct: 370 MNGLVLLLAGEHKGLCGHLVEKNSEEETGVVELSNTKD--MIRVKY 413
>gi|326507120|dbj|BAJ95637.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 479
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 4/105 (3%)
Query: 188 WHTTDIEVRI-NENARDPEFRGQIGVIRHLGSGVCSVYLAE-EERTLSIEAHELEPVMPQ 245
W ++I VR+ NE + + ++ +G C + + + E +E LE V+P+
Sbjct: 361 WLQSNIRVRVVNERFSKRLYLQKAKIVDVVGLTTCDIMMDDGSELVQGVEQDMLETVLPR 420
Query: 246 PNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEEDDVK-MIDVKF 289
N +V V+ G+HK G L+ N E + E+ D K M+ VK+
Sbjct: 421 TNGRVLVLCGKHKGVYGHLVE-KNSEAETAVVEDADTKDMVRVKY 464
>gi|326531458|dbj|BAJ97733.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 467
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 4/105 (3%)
Query: 188 WHTTDIEVRI-NENARDPEFRGQIGVIRHLGSGVCSVYLAE-EERTLSIEAHELEPVMPQ 245
W ++I VR+ NE + + ++ +G C + + + E +E LE V+P+
Sbjct: 349 WLQSNIRVRVVNERFSKRLYLQKAKIVDVVGLTTCDIMMDDGSELVQGVEQDMLETVLPR 408
Query: 246 PNDKVKVIVGEHKECTGVLLSVDNGEGVVKLTEEDDVK-MIDVKF 289
N +V V+ G+HK G L+ N E + E+ D K M+ VK+
Sbjct: 409 TNGRVLVLCGKHKGVYGHLVE-KNSEAETAVVEDADTKDMVRVKY 452
>gi|91078478|ref|XP_968343.1| PREDICTED: similar to kin17 [Tribolium castaneum]
Length = 388
Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 188 WHTTDIEVRINENARDPEFRGQIGVIRHL-GSGVCSVYLAEEERTLSIEAHELEPVMPQP 246
W T DI V++ + E+ Q GVIR + V V L + R L ++ LE V+P
Sbjct: 272 WITEDIVVKVMTKSLGDEYYKQKGVIREVHNKYVAIVKLFDSGRKLKLDQEHLETVIPAI 331
Query: 247 NDKVKVIVGEHKECTGVLLSVD 268
VKV+ G ++ T LLS+D
Sbjct: 332 GKLVKVVNGAYRGETATLLSID 353
>gi|145347649|ref|XP_001418275.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578504|gb|ABO96568.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 938
Score = 43.9 bits (102), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 114/267 (42%), Gaps = 54/267 (20%)
Query: 56 GSRTP---------GGGATPLHDGSRTPG---PWDPSSTPARSIHNDAYPMDDSFNN--- 100
GSRTP GGG TP+H G TP W+P++TPA I ++ P +
Sbjct: 692 GSRTPAHYPMTPAHGGGMTPMH-GGMTPAREAAWNPTATPAH-IQDNWEPTSTAGTGWGA 749
Query: 101 -SYPHTPGTMYGSSSEHTSYSPLQASPSPSGYQSHSGVSSGSSSYLGATP-----SPSS- 153
+ +TPG YG SS A P+P+ Y GV + + G TP +P
Sbjct: 750 GNVGYTPGG-YGDSSA-------LAGPTPNAY----GVGATPGAAYGQTPGGYGQTPGGY 797
Query: 154 EAAPYGTP-SPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGV 212
EA Y P + S+ F PG + + + T + F+ +IG
Sbjct: 798 EADEYVAPPAAASWPEDYKGRFLPGVVVRLTSGAQGYITSVA------PAGSSFKVKIGT 851
Query: 213 IR-HLGSGVCSVY--LAEEERTLSIEAHELEPVMPQPNDKVKVIVGEHKEC----TGVLL 265
R G V A EE ++ ELE V P V +IV + + TG L+
Sbjct: 852 SRPRDGVEVLETVPKSAPEE---TVTEQELEIVRPGKKTSV-IIVTDSGDASRGDTGELI 907
Query: 266 SVDNGEGVVKLTEEDDVKMIDVKFLCK 292
++D +GVV+L+ +DV ++D+ L +
Sbjct: 908 TIDGVDGVVRLSSTNDVVLLDMSCLAR 934
>gi|308805314|ref|XP_003079969.1| probable transcription elongation factor (ISS) [Ostreococcus tauri]
gi|116058426|emb|CAL53615.1| probable transcription elongation factor (ISS) [Ostreococcus tauri]
Length = 926
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 114/263 (43%), Gaps = 61/263 (23%)
Query: 61 GGGATPLHDGSRTPG---PWDPSSTPARSIHNDAYPMDDSFNNSYPHTPGTMYGSSSEHT 117
GG TP+H G+ TP W+P TPA + ++ P T GT +GS++ +T
Sbjct: 690 AGGMTPMH-GAMTPAREAAWNPQQTPAH-MPSEWQPTS---------TAGTGWGSATGYT 738
Query: 118 ----SYSPLQASPSP-SGYQSHSGVSSGSSSYLGATP-----SPSSEAAP---------- 157
S A P+P +GY GV+ G+ Y GATP +P AP
Sbjct: 739 PGGFGDSAALAGPTPGAGY----GVTPGAD-YTGATPGGYGITPGGYDAPRVEDPVPVPA 793
Query: 158 -YGTPSPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVRINENARDPEFRGQIGVIRHL 216
P Y R F PG + + + T + F+ +IG +R +
Sbjct: 794 APVAAWPEDYMGR----FIPGVVVRLSSGAQGYVTSV------GPGGSTFQVKIGTVR-V 842
Query: 217 GSGVCSV----YLAEEERTLSIEAHELEPVMPQPNDKVKVIV---GEHKECTGVLLSVDN 269
GV + A+EE ++ ELE V P+ +V V+ G ++ TG L+S+D
Sbjct: 843 RDGVEVLETVPKTAQEE---TVTEDELEIVKPENKSRVIVVTAAEGANRGETGRLISIDG 899
Query: 270 GEGVVKLTEEDDVKMIDVKFLCK 292
+GV++L DV ++D+ L +
Sbjct: 900 VDGVLRLDSSSDVVILDMACLAR 922
>gi|307213972|gb|EFN89195.1| Transcription elongation factor SPT5 [Harpegnathos saltator]
Length = 275
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 58/118 (49%), Gaps = 25/118 (21%)
Query: 53 YKVGSRTPGGGATPL-HDGSRTPG---PWDPS--STPARSIHNDAYPMDDS----FNNSY 102
Y+ GSRTP G L H+G R PG WDP+ + PAR+ +D Y M++ + Y
Sbjct: 153 YENGSRTPHYGLMTLSHNGLRIPGHSGVWDPAVINIPARTNDSDGYSMEECDSPGYAPGY 212
Query: 103 P--------HTPGTMYGSSSEHTSYSPLQASPSPSGYQSHSGVSSGSSSYLGATPSPS 152
P T GT YG +SY P+ PSP G + +S S + ATPSPS
Sbjct: 213 PPTGGPFTAQTLGTTYGLGQSFSSYQPI---PSPVG----NATTSPSLAGYVATPSPS 263
>gi|413926602|gb|AFW66534.1| hypothetical protein ZEAMMB73_641784 [Zea mays]
gi|413926603|gb|AFW66535.1| hypothetical protein ZEAMMB73_641784 [Zea mays]
Length = 1280
Score = 43.1 bits (100), Expect = 0.13, Method: Composition-based stats.
Identities = 50/168 (29%), Positives = 62/168 (36%), Gaps = 23/168 (13%)
Query: 43 GKTIKITGGPYKVGSRTPGGG---ATPLHDGSRTPG----PWDPSSTPARSIHNDAYPMD 95
GK K T + TPG G ATP G TP WD + TP R DA P
Sbjct: 211 GKKAK-TSSDWDAPDATPGIGRWDATPGRVGDATPSVRRNRWDETPTPGRMADADATPAA 269
Query: 96 DSFNNSYPHTPGTMYGSSSEHTSYSPLQASPSPSGYQSHSGVSSGSSSYLGATPSPSSEA 155
TPG + + T P +P+P G + S +S ATP A
Sbjct: 270 GG------ATPGATPSGAWDATPKLPGGVTPTP-GKKQRSRWDETPASMGSATPGGLGAA 322
Query: 156 APYG-TPSPLSYSSRQASPFTPGT------GLDQYPTPEWHTTDIEVR 196
P G TP P + + + TP +QY W DIE R
Sbjct: 323 TPVGYTPGPTPFGAENLATPTPSQIARGPITPEQYQLMRWE-RDIEER 369
>gi|413935577|gb|AFW70128.1| antigenic determinant of rec-A protein, mRNA isoform 1 [Zea mays]
gi|413935578|gb|AFW70129.1| antigenic determinant of rec-A protein, mRNA isoform 2 [Zea mays]
gi|413935579|gb|AFW70130.1| antigenic determinant of rec-A protein, mRNA isoform 3 [Zea mays]
gi|413935580|gb|AFW70131.1| antigenic determinant of rec-A protein, mRNA isoform 4 [Zea mays]
Length = 1280
Score = 43.1 bits (100), Expect = 0.13, Method: Composition-based stats.
Identities = 46/152 (30%), Positives = 57/152 (37%), Gaps = 22/152 (14%)
Query: 59 TPGGG---ATPLHDGSRTPG----PWDPSSTPARSIHNDAYPMDDSFNNSYPHTPGTMYG 111
TPG G ATP G TP WD + TP R DA P TPG
Sbjct: 226 TPGIGRWDATPGRVGDATPSVRRNRWDETPTPGRMADADATPAAGG------ATPGATPS 279
Query: 112 SSSEHTSYSPLQASPSPSGYQSHSGVSSGSSSYLGATPSPSSEAAPYG-TPSPLSYSSRQ 170
+ + T P +P+P G + S +S ATP A P G TP P + +
Sbjct: 280 GAWDATPKLPGGVTPTP-GKKQRSRWDETPASMGSATPGSLGAATPAGYTPGPTPFGAEN 338
Query: 171 ASPFTPGT------GLDQYPTPEWHTTDIEVR 196
+ TP +QY W DIE R
Sbjct: 339 LATPTPSQIARGPITPEQYQLMRWE-RDIEER 369
>gi|242060490|ref|XP_002451534.1| hypothetical protein SORBIDRAFT_04g003370 [Sorghum bicolor]
gi|241931365|gb|EES04510.1| hypothetical protein SORBIDRAFT_04g003370 [Sorghum bicolor]
Length = 1280
Score = 42.7 bits (99), Expect = 0.19, Method: Composition-based stats.
Identities = 46/152 (30%), Positives = 57/152 (37%), Gaps = 22/152 (14%)
Query: 59 TPGGG---ATPLHDGSRTPG----PWDPSSTPARSIHNDAYPMDDSFNNSYPHTPGTMYG 111
TPG G ATP G TP WD + TP R DA P TPG
Sbjct: 226 TPGIGRWDATPGRVGDATPSVRRNRWDETPTPGRMADADATPAAGG------ATPGATPS 279
Query: 112 SSSEHTSYSPLQASPSPSGYQSHSGVSSGSSSYLGATPSPSSEAAPYG-TPSPLSYSSRQ 170
+ + T P +P+P G + S +S ATP A P G TP P + +
Sbjct: 280 GAWDATPKLPGGVTPTP-GKKQRSRWDETPASMGSATPGGLGAATPAGYTPGPTPFGAEN 338
Query: 171 ASPFTPGT------GLDQYPTPEWHTTDIEVR 196
+ TP +QY W DIE R
Sbjct: 339 LATPTPSQIARGPITPEQYQLMRWE-RDIEER 369
>gi|222622161|gb|EEE56293.1| hypothetical protein OsJ_05364 [Oryza sativa Japonica Group]
Length = 1106
Score = 42.7 bits (99), Expect = 0.19, Method: Composition-based stats.
Identities = 49/176 (27%), Positives = 69/176 (39%), Gaps = 35/176 (19%)
Query: 42 IGKTIKITGGPYKVGSRTPGGG---ATPLHDGSRTPG----PWDPSSTPARSIHNDAYPM 94
+G T + TPG G ATP G TP WD + TP R DA P
Sbjct: 187 VGSKKAKTSSDWDAPDATPGIGRWDATPGRVGDATPSVRRNRWDETPTPGRMADADATPA 246
Query: 95 DDSFN---------NSYPHTPGTMYGSSSEHTSYSPLQASPSPSGYQSHSGVSSGSSSYL 145
++ P PG + + + S +P+ G + G +G+++
Sbjct: 247 AGGITPGATPSGAWDATPKLPGGLV-TPTPKKQRSRWDETPASMGSATPGG--TGAATPA 303
Query: 146 GATPSPSSEAAPYG-----TPSPLSYSSRQASPFTPGTGLDQYPTPEWHTTDIEVR 196
G TP P+ P+G TP+P +SR P TP +QY W DIE R
Sbjct: 304 GYTPGPT----PFGGDNLATPTPGQIASR--GPMTP----EQYQLLRWE-RDIEER 348
>gi|66806799|ref|XP_637122.1| transcription initiation factor Spt5 [Dictyostelium discoideum AX4]
gi|60465555|gb|EAL63639.1| transcription initiation factor Spt5 [Dictyostelium discoideum AX4]
Length = 1131
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 108/276 (39%), Gaps = 57/276 (20%)
Query: 67 LHDGSRTPGPWDPS------STPARSIHNDAYPMDDSFN--------------------- 99
L++ SRTP DPS +TPARS H+D + M +S +
Sbjct: 860 LYNASRTPMREDPSQTPMRMNTPARSSHSDPWSMRESSDYFSSSSSSGSGSGSSSNNNSS 919
Query: 100 ------------NSYPH--TPGTMYGSSSEHTSYSPLQAS----PSPSGYQSHSGVSSGS 141
N Y TPGT Y S +T +PL S P+ + Y S S G
Sbjct: 920 SGGGRDSGSHNGNDYSSGTTPGTNYSLYSPYTPNTPLDGSNRSDPNYTPY-DRSTPSMGY 978
Query: 142 SSYLGATPSPSSEAAPYGTPSPLSYSSRQASPFTPGTGLDQYPTPE---WHTTDIEVRIN 198
+ TPS S P+ PS +P TP + D E W T IEV
Sbjct: 979 GNDPNPTPSYMSNYTPHEIPSSPYTPHNPQTPATPNSSEDHDEEVEPQYWSGTKIEVVFK 1038
Query: 199 ENARDPEFRGQIGVIRHLGSGVCSVYLAEEERTL-SIEAHELEPVMPQPNDKVKVIVGEH 257
++ + V+ +L V + + + + ++ +L V P D+V ++ G+
Sbjct: 1039 DSGK------HAVVLDNLSDSTVRVEMLDTKEVIDNVSQSQLNLVPPAKKDRVVIVKGKL 1092
Query: 258 KECTG-VLLSVDNGEGVVKLTEEDDVKMIDVKFLCK 292
+G + + D G+VK+ D K+ + ++ K
Sbjct: 1093 CGQSGNLFILTDENTGIVKMNSNFDFKVFKMSYIGK 1128
>gi|221057844|ref|XP_002261430.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|194247435|emb|CAQ40835.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 976
Score = 42.0 bits (97), Expect = 0.31, Method: Composition-based stats.
Identities = 34/118 (28%), Positives = 47/118 (39%), Gaps = 12/118 (10%)
Query: 53 YKVGSRTPGGGATPLHDGSRTPGPWDPSSTPARSIHNDAYPMDDSFNNSYPHTPGTMYGS 112
Y+ RTP +P D RTP +P+ S + D N+ Y TP T S
Sbjct: 548 YEDTPRTPSSSNSPYEDTPRTP-------SPSNSPYEDTPRTPSPSNSPYEDTPRTPSPS 600
Query: 113 SSEHTSYSPLQASPSPSGYQSHSGVSSGSSSYLGATPSPSSEAA----PYGTPSPLSY 166
+S + +P SPS S Y+ S + S G P S+ P P P+ Y
Sbjct: 601 NSPYED-TPRTPSPSNSPYEDTPRTPSPTFSPHGNDPQTSTHIPMSYLPASLPFPVGY 657
Score = 41.2 bits (95), Expect = 0.54, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 44/110 (40%), Gaps = 19/110 (17%)
Query: 44 KTIKITGGPYKVGSRTPGGGATPLHDGSRTPGPWD-----------PSSTPARSIHNDAY 92
+T + PY+ RTP +P D RTP P + PS++P
Sbjct: 553 RTPSSSNSPYEDTPRTPSPSNSPYEDTPRTPSPSNSPYEDTPRTPSPSNSPYEDTPRTPS 612
Query: 93 PMDDSFNNSYPHTPGTMYG------SSSEHTSYSPLQAS-PSPSGYQSHS 135
P + + ++ P TP + +S H S L AS P P GY H+
Sbjct: 613 PSNSPYEDT-PRTPSPTFSPHGNDPQTSTHIPMSYLPASLPFPVGYVPHA 661
>gi|780365|gb|AAB05843.1| ORF, partial [Rattus norvegicus]
Length = 134
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 32/51 (62%), Gaps = 6/51 (11%)
Query: 52 PYKVGSRTPG-GGATPLHDGSRTP---GPWDPS--STPARSIHNDAYPMDD 96
P + GSRTP G TPLHDGSRTP G WDP+ +TP+R+ Y DD
Sbjct: 72 PLQDGSRTPHYGSQTPLHDGSRTPAQSGGWDPNNPNTPSRAEEEYEYAFDD 122
>gi|452820428|gb|EME27470.1| zinc finger protein [Galdieria sulphuraria]
Length = 369
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 61/122 (50%), Gaps = 16/122 (13%)
Query: 183 YPTPEWHTTDIEVRI-NENARDPEFRGQIGVIRHLGSGVCSVYLAEEE-----RTLSIEA 236
Y W ++ VR+ N + + + GVI+ V +Y+A+ E + ++
Sbjct: 249 YKQLNWLEENLVVRVKNTELENGYYFKRKGVIKE----VFDLYIADVEILQLGDLIRLDQ 304
Query: 237 HELEPVMPQPNDKVKVIVGEHKECTGVLLSVDNGEGVVKL---TEEDDVKMID---VKFL 290
+LEPV+PQP +V+VI GE+K +LS+D L T+ + M++ ++++
Sbjct: 305 EDLEPVIPQPGGQVRVIYGENKGTNATILSLDMERKTACLKPETQSESSLMLNDVPLQYI 364
Query: 291 CK 292
CK
Sbjct: 365 CK 366
>gi|421489274|ref|ZP_15936657.1| Gram-positive signal peptide protein, YSIRK family [Streptococcus
oralis SK304]
gi|400366277|gb|EJP19312.1| Gram-positive signal peptide protein, YSIRK family [Streptococcus
oralis SK304]
Length = 1085
Score = 42.0 bits (97), Expect = 0.36, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 5/90 (5%)
Query: 103 PHTPGTMYGSSSEHTSYSP-LQASPSPSGYQSHSGVSSGSSSYLGATPSPSSEAAPY--- 158
PHTP + ++ P LQ SP P G + H+ G+ + +TP P + +P
Sbjct: 772 PHTPAQPSTEDKKPSAPKPDLQPSPQPEGKKPHTPAQPGAENQKPSTPKPGMQPSPQPEG 831
Query: 159 -GTPSPLSYSSRQASPFTPGTGLDQYPTPE 187
+P S+ P P G+ P PE
Sbjct: 832 KKPHTPPQPSTENQKPSAPKPGMQPSPQPE 861
>gi|406956656|gb|EKD84716.1| hypothetical protein ACD_38C00169G0017 [uncultured bacterium]
Length = 1041
Score = 41.6 bits (96), Expect = 0.47, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 57/138 (41%), Gaps = 14/138 (10%)
Query: 79 PSSTPARSIHNDAYPMDDSFNNSYPHTPGTMYGSSSEHTSYSP-LQASPSPSGYQSHSGV 137
P TP + A P DDS + Y HTP G S E P + +PS S + +G
Sbjct: 281 PPVTPG----DPAIPPDDS--DEY-HTPPVAPGESKEQAQARPYFEITPSGSSTKPLTGY 333
Query: 138 -SSGSSSYL---GATPSPSSEAAPYGTPSPLSYSSRQASPFTPGTGLDQYPTPEWHTTDI 193
+SG SY T S + + YG S +S S RQ +GL P P + DI
Sbjct: 334 YASGRKSYYDVDSKTWSKRKQISSYG--SDISGSERQTISGVTNSGLKSIPIPNGYGLDI 391
Query: 194 EVRINENARDPEFRGQIG 211
AR FR Q G
Sbjct: 392 SSLKYNGARPEIFRDQNG 409
>gi|289704523|ref|ZP_06500958.1| translation initiation factor IF-3 [Micrococcus luteus SK58]
gi|289558781|gb|EFD52037.1| translation initiation factor IF-3 [Micrococcus luteus SK58]
Length = 408
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 89 NDAYPMDDSFNNSYPHTPGTMYGSSSEHTSYSPLQASPSPS----GYQSHSGVSSGSSSY 144
+D+ P+ +S +++P M + E+ S +P + +P + + + S+
Sbjct: 290 SDSAPVRNSIGDAFPEQLKAMAARTQENASAAPAETKQAPKTPAPAAKPATRATPASAPK 349
Query: 145 LGATPSPSSEAAPYGTPSP 163
ATP P S AAP TP P
Sbjct: 350 PAATPKPRSSAAPAATPKP 368
>gi|196015634|ref|XP_002117673.1| hypothetical protein TRIADDRAFT_32870 [Trichoplax adhaerens]
gi|190579713|gb|EDV19803.1| hypothetical protein TRIADDRAFT_32870 [Trichoplax adhaerens]
Length = 678
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 35/68 (51%), Gaps = 12/68 (17%)
Query: 52 PYKVGSRTPG-GGATPLHDGSRTP---GPWDPS--STPARSIHNDAYPMDDSFN------ 99
P G+RTP G TP+HDGSRTP WDP +TP+ +D DS N
Sbjct: 608 PLYDGNRTPRYGSQTPMHDGSRTPSYSSAWDPKVPNTPSSRTEDDFDYNTDSVNPSPQGY 667
Query: 100 NSYPHTPG 107
+S P TPG
Sbjct: 668 HSNPVTPG 675
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.310 0.132 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,944,061,560
Number of Sequences: 23463169
Number of extensions: 317571633
Number of successful extensions: 1625148
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 518
Number of HSP's successfully gapped in prelim test: 6033
Number of HSP's that attempted gapping in prelim test: 1540624
Number of HSP's gapped (non-prelim): 56369
length of query: 296
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 155
effective length of database: 9,050,888,538
effective search space: 1402887723390
effective search space used: 1402887723390
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 76 (33.9 bits)