RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy13746
(294 letters)
>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA
dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}
Length = 192
Score = 93.1 bits (230), Expect = 2e-23
Identities = 41/220 (18%), Positives = 87/220 (39%), Gaps = 41/220 (18%)
Query: 17 GIIG--LIGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGCLKGSLSPA 74
+IG L+G A + A+ G+ V L D + + +K I+ +L+ +
Sbjct: 8 TVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAK----------- 56
Query: 75 HAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGCLKGSLSPEEQFGLISGTPVLRECLE 134
+ G E+ I+ + +
Sbjct: 57 ----------------------------KKFAENPKAGDEFVEKTLSTIATSTDAASVVH 88
Query: 135 DAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEHSTHRSQFIVAHP 194
+ E++ E L++K+++++ +D F + +TI +S+TSS + ++ +T + +F H
Sbjct: 89 STDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSSLQITSIANATTRQDRFAGLHF 148
Query: 195 VNPPYFIPLVEIVPAAWTSERVITRTREIMTEIGMKPVTL 234
NP + LVE++ TS++ + +G PV+
Sbjct: 149 FNPVPVMKLVEVIKTPMTSQKTFESLVDFSKALGKHPVSC 188
>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit,
middle domain {Pseudomonas fragi [TaxId: 296]}
Length = 186
Score = 86.1 bits (212), Expect = 6e-21
Identities = 40/219 (18%), Positives = 76/219 (34%), Gaps = 47/219 (21%)
Query: 17 GIIG--LIGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGCLKGSLSPA 74
++G ++G A AS G + + D+ IE L KG
Sbjct: 8 AVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLVGRVDKG--------- 58
Query: 75 HAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGCLKGSLSPEEQFGLISGTPVLRECLE 134
+ ++ N I+ TL
Sbjct: 59 ---------RMTPAKMAEVLNGIRPTLSYGDFGNV------------------------- 84
Query: 135 DAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEHSTHRSQFIVAHP 194
+ E+V E ++K V ++ + + IL+S+TS+ S+L++ F+ H
Sbjct: 85 --DLVVEAVVENPKVKQAVLAEVENHVREDAILASNTSTISISLLAKALKRPENFVGMHF 142
Query: 195 VNPPYFIPLVEIVPAAWTSERVITRTREIMTEIGMKPVT 233
NP + +PLVE++ +S+ + T ++G P+
Sbjct: 143 FNPVHMMPLVEVIRGEKSSDLAVATTVAYAKKMGKNPIV 181
>d2b0ja2 c.2.1.6 (A:1-242) 5,10-methenyltetrahydromethanopterin
hydrogenase, HMD {Archaeon Methanocaldococcus jannaschii
[TaxId: 2190]}
Length = 242
Score = 53.8 bits (129), Expect = 3e-09
Identities = 25/186 (13%), Positives = 57/186 (30%), Gaps = 17/186 (9%)
Query: 50 AKNTIQHTLQDYHQKGCLKGSLSPAHAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGC 109
A+ + ++ K ++ LS + +V+ + + K C
Sbjct: 68 AEEPGLVVIDEFDPKEVMEAHLSGNPESIMPKIREVVKAKAKELPKP---------PKAC 118
Query: 110 LKGSLSPEEQFGLISGTPVLRECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSS 169
+ + PE+ ++ RE +E A + +P + + + + I++
Sbjct: 119 IH-LVHPEDVGLKVTSDD--REAVEGADIVITWLP-KGNKQPDIIKKFADAIPEGAIVTH 174
Query: 170 STSSFLPS---VLSEHSTHRSQFIVAHPVNPPYFIPLVEIVPAAWTSERVITRTREIMTE 226
+ + + + HP P V I + SE + + EI
Sbjct: 175 ACTIPTTKFAKIFKDLGREDLNITSYHPGCVPEMKGQVYIA-EGYASEEAVNKLYEIGKI 233
Query: 227 IGMKPV 232
K
Sbjct: 234 ARGKAF 239
>d1f0ya1 a.100.1.3 (A:204-302) Short chain L-3-hydroxyacyl CoA
dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}
Length = 99
Score = 39.1 bits (90), Expect = 7e-05
Identities = 14/36 (38%), Positives = 17/36 (47%)
Query: 240 GFALNRIQFAVLNECYHLVHDGVLSAKDIDRVMSEG 275
GF +NR+ L E L G S +DID M G
Sbjct: 1 GFIVNRLLVPYLMEAIRLYERGDASKEDIDTAMKLG 36
>d1wdka2 a.100.1.3 (A:621-715) Fatty oxidation complex alpha
subunit, C-terminal domain {Pseudomonas fragi [TaxId:
296]}
Length = 95
Score = 34.8 bits (80), Expect = 0.002
Identities = 11/50 (22%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Query: 243 LNRIQFAVLNECYHLVHDGVL-SAKDIDRVMSEGLGLRYAFLGPLETIHL 291
+N + + E + DG++ +A + D + G+G G L I
Sbjct: 8 INWMMIPLCLETVRCLEDGIVETAAEADMGLVYGIGFPLFRGGALRYIDS 57
>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline
dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}
Length = 184
Score = 36.0 bits (82), Expect = 0.002
Identities = 20/96 (20%), Positives = 38/96 (39%), Gaps = 3/96 (3%)
Query: 18 IIGL--IGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGCLKGSLSPAH 75
++GL G A+A A G V +D+ +++I+ ++ + G L +
Sbjct: 6 VLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSD 65
Query: 76 AGYKVSLYDVLSEQI-ENAKNTIQHTLQDYHQKGCL 110
G V DV+ + +I + Y +G L
Sbjct: 66 IGLAVKDADVILIVVPAIHHASIAANIASYISEGQL 101
>d1wdka1 a.100.1.3 (A:497-620) Fatty oxidation complex alpha
subunit, C-terminal domain {Pseudomonas fragi [TaxId:
296]}
Length = 124
Score = 33.6 bits (76), Expect = 0.007
Identities = 9/31 (29%), Positives = 12/31 (38%)
Query: 240 GFALNRIQFAVLNECYHLVHDGVLSAKDIDR 270
GF +NR+ F LV GV +
Sbjct: 1 GFLVNRVLFPYFGGFAKLVSAGVDFVRIDKV 31
>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase
{Pseudomonas aeruginosa [TaxId: 287]}
Length = 202
Score = 33.8 bits (76), Expect = 0.014
Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
Query: 17 GIIGL--IGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQ 63
I GL +G A ++ G++V DV S +I+ ++ +
Sbjct: 4 SIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLE 52
>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase
{Trypanosoma brucei [TaxId: 5691]}
Length = 178
Score = 32.7 bits (73), Expect = 0.032
Identities = 11/52 (21%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Query: 17 GIIGL--IGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGC 66
G++GL +G A+ A G+KV++++ + E + K
Sbjct: 5 GVVGLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAF 56
>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter
oxydans [TaxId: 442]}
Length = 260
Score = 31.7 bits (71), Expect = 0.086
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 22 IGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQ 55
IG A A+ A G ++L D+ E +E A+ +++
Sbjct: 17 IGLATALRLAEEGTAIALLDMNREALEKAEASVR 50
>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep
(Ovis orientalis aries) [TaxId: 9940]}
Length = 176
Score = 31.1 bits (69), Expect = 0.095
Identities = 7/52 (13%), Positives = 18/52 (34%), Gaps = 2/52 (3%)
Query: 17 GIIGL--IGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGC 66
+IGL +GQ + G+ V ++ ++++ +
Sbjct: 6 ALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSL 57
>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium
aquaticum [TaxId: 144185]}
Length = 258
Score = 31.3 bits (70), Expect = 0.12
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 22 IGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQHT 57
+G+A A+ A+ G K+SL DV SE +E +K + T
Sbjct: 16 LGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLET 51
>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO)
{Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Length = 212
Score = 30.8 bits (68), Expect = 0.13
Identities = 7/36 (19%), Positives = 17/36 (47%)
Query: 20 GLIGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQ 55
G +G+ A+ A+ G+++ + E+ E +
Sbjct: 10 GNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYR 45
>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase
{Human (Homo sapiens) [TaxId: 9606]}
Length = 297
Score = 31.2 bits (70), Expect = 0.13
Identities = 10/46 (21%), Positives = 19/46 (41%)
Query: 22 IGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGCL 67
IG+A G V + E++++A + +Q L Q +
Sbjct: 24 IGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVI 69
>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine
reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 236
Score = 30.9 bits (69), Expect = 0.15
Identities = 12/84 (14%), Positives = 26/84 (30%), Gaps = 6/84 (7%)
Query: 22 IGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGCLKGSLSPAHAGYKVS 81
+G F + + V+ DV+ + +A ++ T Q + + KV
Sbjct: 14 LGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTDSFTEQADQVTAEVGKLLGDQKV- 72
Query: 82 LYDVLSEQIENAKNTIQHTLQDYH 105
D + + A +
Sbjct: 73 --DAI---LCVAGGWAGGNAKSKS 91
>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol
dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId:
35933]}
Length = 268
Score = 30.4 bits (68), Expect = 0.22
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 22 IGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQ 55
IG+ A +F G KV + D+ + + N I
Sbjct: 18 IGETTAKLFVRYGAKVVIADIADDHGQKVCNNIG 51
>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI
{Human (Homo sapiens) [TaxId: 9606]}
Length = 244
Score = 30.3 bits (68), Expect = 0.22
Identities = 9/34 (26%), Positives = 15/34 (44%)
Query: 22 IGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQ 55
IG+ A FA K+ L+D+ +E +
Sbjct: 19 IGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCK 52
>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein
reductase {Malaria parasite (Plasmodium falciparum)
[TaxId: 5833]}
Length = 251
Score = 30.0 bits (67), Expect = 0.26
Identities = 6/34 (17%), Positives = 14/34 (41%)
Query: 22 IGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQ 55
IG+ A + A + V + ++ + I+
Sbjct: 22 IGREIAKMLAKSVSHVICISRTQKSCDSVVDEIK 55
>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 257
Score = 29.9 bits (67), Expect = 0.29
Identities = 9/34 (26%), Positives = 10/34 (29%)
Query: 22 IGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQ 55
IG A A G KV IE +
Sbjct: 22 IGAAVARALVQQGLKVVGCARTVGNIEELAAECK 55
>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein
reductase {Streptomyces coelicolor [TaxId: 1902]}
Length = 257
Score = 30.1 bits (67), Expect = 0.30
Identities = 6/34 (17%), Positives = 11/34 (32%)
Query: 22 IGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQ 55
IG A G +V + E + ++
Sbjct: 14 IGLEIARRLGKEGLRVFVCARGEEGLRTTLKELR 47
>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 244
Score = 29.6 bits (66), Expect = 0.31
Identities = 7/33 (21%), Positives = 14/33 (42%)
Query: 22 IGQAWAMIFASAGYKVSLYDVLSEQIENAKNTI 54
+G + + G KV D+L E+ + +
Sbjct: 18 MGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL 50
>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase
{Escherichia coli [TaxId: 562]}
Length = 255
Score = 30.0 bits (67), Expect = 0.32
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 22 IGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQ 55
IG+ A+ FA+AG V + D+ ++ + + IQ
Sbjct: 23 IGKEIAITFATAGASVVVSDINADAANHVVDEIQ 56
>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis
elegans [TaxId: 6239]}
Length = 272
Score = 29.6 bits (66), Expect = 0.39
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 22 IGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQ 55
IG+ A++FA G V++ SE++E + I
Sbjct: 17 IGRTTAILFAQEGANVTITGRSSERLEETRQIIL 50
>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura
stramonium), II [TaxId: 4076]}
Length = 259
Score = 29.6 bits (66), Expect = 0.40
Identities = 6/41 (14%), Positives = 11/41 (26%)
Query: 22 IGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQHTLQDYH 62
IG AS G V +++ + +
Sbjct: 20 IGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVE 60
>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE
{Escherichia coli [TaxId: 562]}
Length = 167
Score = 29.1 bits (64), Expect = 0.40
Identities = 6/35 (17%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 17 GIIGL--IGQAWAMIFASAGYKVSLYDVLSEQIEN 49
++G +GQ W G++V + + + +
Sbjct: 4 TVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCS 38
>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 264
Score = 29.5 bits (66), Expect = 0.40
Identities = 12/34 (35%), Positives = 21/34 (61%)
Query: 22 IGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQ 55
IG+A A++FA G KV++ +E++E + I
Sbjct: 17 IGRATAVLFAREGAKVTITGRHAERLEETRQQIL 50
>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase
{Klebsiella pneumoniae [TaxId: 573]}
Length = 255
Score = 29.4 bits (65), Expect = 0.41
Identities = 8/34 (23%), Positives = 15/34 (44%)
Query: 22 IGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQ 55
IG+A A+ G+ V++ D + + I
Sbjct: 13 IGKAIALRLVKDGFAVAIADYNDATAKAVASEIN 46
>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase
{Thermus thermophilus [TaxId: 274]}
Length = 242
Score = 29.2 bits (65), Expect = 0.44
Identities = 8/33 (24%), Positives = 15/33 (45%)
Query: 22 IGQAWAMIFASAGYKVSLYDVLSEQIENAKNTI 54
IG+A +FA G ++ D+ + A +
Sbjct: 17 IGRATLELFAKEGARLVACDIEEGPLREAAEAV 49
>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura
stramonium), I [TaxId: 4076]}
Length = 258
Score = 29.3 bits (65), Expect = 0.44
Identities = 6/41 (14%), Positives = 13/41 (31%)
Query: 22 IGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQHTLQDYH 62
IG A A G +V ++++ + +
Sbjct: 18 IGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVE 58
>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA
{Synechocystis sp. pcc 6803 [TaxId: 1148]}
Length = 165
Score = 29.0 bits (63), Expect = 0.45
Identities = 9/52 (17%), Positives = 14/52 (26%), Gaps = 2/52 (3%)
Query: 17 GIIG--LIGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGC 66
G++G LIG + A G+ + E A
Sbjct: 4 GVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLL 55
>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase
{Streptomyces hydrogenans [TaxId: 1905]}
Length = 254
Score = 29.2 bits (65), Expect = 0.46
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 22 IGQAWAMIFASAGYKVSLYDVLSEQIENAKNTI 54
+G A +AG +V L DVL E+ +
Sbjct: 17 LGAEAARQAVAAGARVVLADVLDEEGAATAREL 49
>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase
{Archaeoglobus fulgidus [TaxId: 2234]}
Length = 180
Score = 28.9 bits (63), Expect = 0.48
Identities = 16/115 (13%), Positives = 35/115 (30%), Gaps = 7/115 (6%)
Query: 17 GIIGL--IGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQK-----GCLKG 69
I+G +G A ++ G +V ++ + + K
Sbjct: 4 SILGAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPE 63
Query: 70 SLSPAHAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGCLKGSLSPEEQFGLIS 124
L +V L V ++ + + I L+D + KG + + +
Sbjct: 64 QLEKCLENAEVVLLGVSTDGVLPVMSRILPYLKDQYIVLISKGLIDFDNSVLTVP 118
>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase
{Human (Homo sapiens) [TaxId: 9606]}
Length = 248
Score = 29.1 bits (64), Expect = 0.50
Identities = 7/45 (15%), Positives = 12/45 (26%)
Query: 22 IGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGC 66
+G A A G L D+ + E + +
Sbjct: 17 LGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVT 61
>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase
{Lactobacillus brevis [TaxId: 1580]}
Length = 251
Score = 29.2 bits (65), Expect = 0.57
Identities = 11/33 (33%), Positives = 15/33 (45%)
Query: 22 IGQAWAMIFASAGYKVSLYDVLSEQIENAKNTI 54
IG A A F G KV + S+ E A ++
Sbjct: 18 IGLAIATKFVEEGAKVMITGRHSDVGEKAAKSV 50
>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase,
PGDH {Human (Homo sapiens) [TaxId: 9606]}
Length = 254
Score = 29.2 bits (65), Expect = 0.57
Identities = 11/34 (32%), Positives = 15/34 (44%)
Query: 22 IGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQ 55
IG+A+A G KV+L D E K +
Sbjct: 15 IGRAFAEALLLKGAKVALVDWNLEAGVQCKAALH 48
>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase
{Pseudomonas aeruginosa [TaxId: 287]}
Length = 162
Score = 28.7 bits (63), Expect = 0.57
Identities = 15/96 (15%), Positives = 29/96 (30%), Gaps = 12/96 (12%)
Query: 17 GIIGL--IGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGCLKGSLSPA 74
IGL +G A AGY ++++D++ ++ +
Sbjct: 5 AFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQ-------- 56
Query: 75 HAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGCL 110
G V + + + Q L + G L
Sbjct: 57 --GADVVISMLPASQHVEGLYLDDDGLLAHIAPGTL 90
>d1ufza_ a.5.9.1 (A:) HBS1-like protein {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 83
Score = 27.5 bits (61), Expect = 0.57
Identities = 17/57 (29%), Positives = 26/57 (45%)
Query: 114 LSPEEQFGLISGTPVLRECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSS 170
LS +Q L S +RE L DA+ IL+ K V +A+ + + + SS
Sbjct: 26 LSEIDQARLYSCLDHMREVLGDAVPDDILTEAILKHKFDVQKALSVVLEQDGSGPSS 82
>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 259
Score = 28.8 bits (64), Expect = 0.62
Identities = 7/34 (20%), Positives = 11/34 (32%)
Query: 22 IGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQ 55
IG A FA G + ++ + Q
Sbjct: 20 IGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQ 53
>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis
elegans [TaxId: 6239]}
Length = 274
Score = 28.8 bits (64), Expect = 0.63
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 22 IGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQ 55
IG++ A+IFA G +V++ +++E K I
Sbjct: 16 IGRSAAVIFAKEGAQVTITGRNEDRLEETKQQIL 49
>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter
sphaeroides [TaxId: 1063]}
Length = 256
Score = 28.6 bits (63), Expect = 0.72
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 22 IGQAWAMIFASAGYKVSLYDVLSEQIENAKNTI 54
IG+A+A + G +V++ D+ E I
Sbjct: 17 IGRAFAEAYVREGARVAIADINLEAARATAAEI 49
>d2o9ux1 d.17.1.1 (X:1001-1096) Monellin, B & A chains together
{Serendipity berry (Dioscoreophyllum cumminsii) [TaxId:
3457]}
Length = 96
Score = 27.3 bits (60), Expect = 0.75
Identities = 11/36 (30%), Positives = 21/36 (58%)
Query: 119 QFGLISGTPVLRECLEDAIFIQESVPEILQIKHQVY 154
Q+G ++ V+R C++ I+ E EI ++Q+Y
Sbjct: 28 QYGRLTFNKVIRPCMKKTIYENEGFREIKGYEYQLY 63
>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase
{Thermotoga maritima [TaxId: 2336]}
Length = 234
Score = 28.5 bits (63), Expect = 0.77
Identities = 7/33 (21%), Positives = 17/33 (51%)
Query: 22 IGQAWAMIFASAGYKVSLYDVLSEQIENAKNTI 54
IG+A A + + G +V++ E ++ + +
Sbjct: 16 IGRAVADVLSQEGAEVTICARNEELLKRSGHRY 48
>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase
{Escherichia coli [TaxId: 562]}
Length = 243
Score = 28.6 bits (63), Expect = 0.78
Identities = 8/33 (24%), Positives = 13/33 (39%)
Query: 22 IGQAWAMIFASAGYKVSLYDVLSEQIENAKNTI 54
IG+A A A+ G KV + + +
Sbjct: 16 IGRAIAETLAARGAKVIGTATSENGAQAISDYL 48
>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase
{Salmonella typhimurium [TaxId: 90371]}
Length = 161
Score = 28.2 bits (62), Expect = 0.86
Identities = 12/43 (27%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Query: 17 GIIGL--IGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQHT 57
G IGL +G+ + AGY + + D E I + T
Sbjct: 4 GFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAET 46
>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH)
{Streptococcus pyogenes [TaxId: 1314]}
Length = 196
Score = 28.4 bits (62), Expect = 0.87
Identities = 7/52 (13%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Query: 17 GIIGL--IGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGC 66
+ G +G + ++ + +V++ D+L +++ N + +Y +
Sbjct: 4 AVAGSGYVGLSLGVLLSL-QNEVTIVDILPSKVDKINNGLSPIQDEYIEYYL 54
>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 252
Score = 28.5 bits (63), Expect = 0.93
Identities = 8/38 (21%), Positives = 17/38 (44%)
Query: 22 IGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQHTLQ 59
G A+ + AG+ V+ +D +Q + + + Q
Sbjct: 12 GGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQ 49
>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase
{Comamonas testosteroni [TaxId: 285]}
Length = 253
Score = 28.0 bits (62), Expect = 1.1
Identities = 5/33 (15%), Positives = 11/33 (33%)
Query: 22 IGQAWAMIFASAGYKVSLYDVLSEQIENAKNTI 54
+G + G KV+ D+ + +
Sbjct: 18 VGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL 50
>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 244
Score = 28.0 bits (62), Expect = 1.1
Identities = 4/33 (12%), Positives = 10/33 (30%)
Query: 22 IGQAWAMIFASAGYKVSLYDVLSEQIENAKNTI 54
IG+ + G +V +++
Sbjct: 19 IGRGTVQALHATGARVVAVSRTQADLDSLVREC 51
>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family
member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}
Length = 245
Score = 28.1 bits (62), Expect = 1.1
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 22 IGQAWAMIFASAGYKVSLYDVLSEQIENAKN 52
IGQA A+ FA G KV D+ +++ +
Sbjct: 18 IGQAAALAFAREGAKVIATDINESKLQELEK 48
>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein
reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}
Length = 241
Score = 28.1 bits (62), Expect = 1.2
Identities = 8/33 (24%), Positives = 13/33 (39%)
Query: 22 IGQAWAMIFASAGYKVSLYDVLSEQIENAKNTI 54
IG+A +FA G + D + A +
Sbjct: 17 IGRAALDLFAREGASLVAVDREERLLAEAVAAL 49
>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of
estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 302
Score = 28.0 bits (62), Expect = 1.2
Identities = 10/47 (21%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Query: 22 IGQAWAMIFASAGYKVSLYDVLSEQIENAKN--TIQHTLQDYHQKGC 66
+G+A+A+ FA G V + D+ + K +++ ++G
Sbjct: 19 LGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGG 65
>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial
(DECR) {Human (Homo sapiens), [TaxId: 9606]}
Length = 294
Score = 28.2 bits (62), Expect = 1.2
Identities = 4/34 (11%), Positives = 13/34 (38%)
Query: 22 IGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQ 55
+G+ + +S G + + + ++ I
Sbjct: 37 LGKGMTTLLSSLGAQCVIASRKMDVLKATAEQIS 70
>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga
maritima [TaxId: 2336]}
Length = 251
Score = 28.1 bits (62), Expect = 1.3
Identities = 8/33 (24%), Positives = 12/33 (36%)
Query: 22 IGQAWAMIFASAGYKVSLYDVLSEQIENAKNTI 54
+G A A AG V + E+ A +
Sbjct: 17 LGFGIAQGLAEAGCSVVVASRNLEEASEAAQKL 49
>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine
reductase) {Nematode (Caenorhabditis elegans) [TaxId:
6239]}
Length = 235
Score = 27.9 bits (61), Expect = 1.3
Identities = 8/42 (19%), Positives = 14/42 (33%)
Query: 22 IGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQ 63
+G A F GY V D+ + ++ + Q
Sbjct: 14 LGSAILEFFKKNGYTVLNIDLSANDQADSNILVDGNKNWTEQ 55
>d1ieja_ c.94.1.2 (A:) Ovotransferrin {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 329
Score = 28.1 bits (62), Expect = 1.4
Identities = 10/74 (13%), Positives = 21/74 (28%), Gaps = 3/74 (4%)
Query: 46 QIENAKNTIQHTLQDYHQKG-CLKGSLSPAHAGYKVSLY--DVLSEQIENAKNTIQHTLQ 102
+ K + T+ D K C G A + E +++ +
Sbjct: 91 AVAVVKKGTEFTVNDLQGKTSCHTGLGRSAGWNIPIGTLLHRGAIEWEGIESGSVEQAVA 150
Query: 103 DYHQKGCLKGSLSP 116
+ C+ G+
Sbjct: 151 KFFSASCVPGATIE 164
>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus
thermophilus [TaxId: 274]}
Length = 248
Score = 27.9 bits (62), Expect = 1.4
Identities = 14/38 (36%), Positives = 18/38 (47%)
Query: 22 IGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQHTLQ 59
IG+A A FA G V+L D+ E E A+ Q
Sbjct: 17 IGRAIAQAFAREGALVALCDLRPEGKEVAEAIGGAFFQ 54
>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3
{Human (Homo sapiens) [TaxId: 9606]}
Length = 250
Score = 27.6 bits (61), Expect = 1.6
Identities = 6/33 (18%), Positives = 12/33 (36%)
Query: 22 IGQAWAMIFASAGYKVSLYDVLSEQIENAKNTI 54
IG F ++G +V + D + +
Sbjct: 18 IGAGIVRAFVNSGARVVICDKDESGGRALEQEL 50
>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1
{Human (Homo sapiens) [TaxId: 9606]}
Length = 269
Score = 27.8 bits (61), Expect = 1.6
Identities = 7/33 (21%), Positives = 12/33 (36%)
Query: 22 IGQAWAMIFASAGYKVSLYDVLSEQIENAKNTI 54
IG+ A A G V + E ++ +
Sbjct: 26 IGREMAYHLAKMGAHVVVTARSKETLQKVVSHC 58
>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747
{Archaeon Methanobacterium thermoautotrophicum [TaxId:
145262]}
Length = 152
Score = 26.7 bits (58), Expect = 2.1
Identities = 8/42 (19%), Positives = 11/42 (26%), Gaps = 2/42 (4%)
Query: 17 GIIGL--IGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQH 56
G IG + Q A S G +V +
Sbjct: 4 GFIGFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTVG 45
>d1bdba_ c.2.1.2 (A:)
Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
{Pseudomonas sp., lb400 [TaxId: 306]}
Length = 276
Score = 27.3 bits (60), Expect = 2.1
Identities = 8/31 (25%), Positives = 17/31 (54%)
Query: 22 IGQAWAMIFASAGYKVSLYDVLSEQIENAKN 52
+G+A F + G KV++ D +E++ +
Sbjct: 17 LGRALVDRFVAEGAKVAVLDKSAERLAELET 47
>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein
reductase {Mycobacterium tuberculosis [TaxId: 1773]}
Length = 237
Score = 27.0 bits (59), Expect = 2.3
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 22 IGQAWAMIFASAGYKVSLYDVLSEQIENA 50
IG A A A+ G+KV++ S +
Sbjct: 19 IGLAIAQRLAADGHKVAVTHRGSGAPKGL 47
>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 242
Score = 27.3 bits (60), Expect = 2.3
Identities = 5/33 (15%), Positives = 11/33 (33%)
Query: 22 IGQAWAMIFASAGYKVSLYDVLSEQIENAKNTI 54
IG+ ++G KV + + +
Sbjct: 17 IGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC 49
>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite
(Plasmodium falciparum) [TaxId: 5833]}
Length = 329
Score = 27.2 bits (58), Expect = 2.4
Identities = 14/102 (13%), Positives = 24/102 (23%), Gaps = 3/102 (2%)
Query: 22 IGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGCLKGSLSPAHAGYKVS 81
G A + K+ KN + K + S
Sbjct: 16 YGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDAS 75
Query: 82 LYDVLSEQIENAKNTIQHTLQDYHQKGCLKGSLSPEEQFGLI 123
E N + LQ+Y + +++G I
Sbjct: 76 FDTANDIDEETKNNKRYNMLQNYTIEDVAN---LIHQKYGKI 114
>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine
reductase) {Leishmania major [TaxId: 5664]}
Length = 284
Score = 26.5 bits (57), Expect = 3.4
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 22 IGQAWAMIFASAGYKVSLYDVLSEQIENA 50
+G++ A + GY V L+ S NA
Sbjct: 14 LGRSIAEGLHAEGYAVCLHYHRSAAEANA 42
>d2g9wa1 a.4.5.39 (A:3-124) Hypothetical protein Rv1846c
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 122
Score = 25.5 bits (56), Expect = 3.9
Identities = 12/87 (13%), Positives = 27/87 (31%), Gaps = 12/87 (13%)
Query: 39 LYDVLSEQIENAKNTIQHTLQDYHQKGCLKGSLSPAHAGYKVSLYDVLSEQIENAKNTIQ 98
+++ LS + + A T+ LQ +K + + Y + + E +
Sbjct: 28 VHEALSARRDLAYTTVMAVLQRLAKKNLVL-----QIRDDRAHRYAPVHGRDELVAGLMV 82
Query: 99 HTLQDYHQKGCLK-------GSLSPEE 118
L G + + +E
Sbjct: 83 DALAQAEDSGSRQAALVHFVERVGADE 109
>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase
{Comamonas testosteroni [TaxId: 285]}
Length = 257
Score = 26.4 bits (57), Expect = 4.0
Identities = 6/26 (23%), Positives = 14/26 (53%)
Query: 22 IGQAWAMIFASAGYKVSLYDVLSEQI 47
IG A + +AG+++ D+ ++
Sbjct: 13 IGAATRKVLEAAGHQIVGIDIRDAEV 38
>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus
bisporus) [TaxId: 5341]}
Length = 260
Score = 26.2 bits (57), Expect = 4.1
Identities = 7/33 (21%), Positives = 13/33 (39%)
Query: 22 IGQAWAMIFASAGYKVSLYDVLSEQIENAKNTI 54
IG A+ A+AG V++ + +
Sbjct: 21 IGLAFTRAVAAAGANVAVIYRSAADAVEVTEKV 53
>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus
[TaxId: 274]}
Length = 256
Score = 26.3 bits (57), Expect = 4.2
Identities = 8/45 (17%), Positives = 14/45 (31%)
Query: 22 IGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGC 66
+G A A AG +V+L A+ + +
Sbjct: 22 LGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRAD 66
>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase
{Rice blast fungus (Magnaporthe grisea) [TaxId:
148305]}
Length = 259
Score = 26.2 bits (57), Expect = 4.3
Identities = 8/35 (22%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 22 IGQAWAMIFASAGYKVSL-YDVLSEQIENAKNTIQ 55
IG+ A+ G V + Y S+ E ++
Sbjct: 18 IGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELK 52
>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase
{Thermus thermophilus [TaxId: 274]}
Length = 241
Score = 26.3 bits (57), Expect = 4.7
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 22 IGQAWAMIFASAGYKVSLYDVLSE 45
+G+A A+ + GY+V + D+ E
Sbjct: 13 LGRAAALALKARGYRVVVLDLRRE 36
>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine
reductase) {Trypanosoma cruzi [TaxId: 5693]}
Length = 266
Score = 26.0 bits (56), Expect = 5.0
Identities = 7/29 (24%), Positives = 13/29 (44%)
Query: 22 IGQAWAMIFASAGYKVSLYDVLSEQIENA 50
IG + A+ G++V ++ SE
Sbjct: 13 IGHSIAVRLHQQGFRVVVHYRHSEGAAQR 41
>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia
pseudotuberculosis [TaxId: 633]}
Length = 356
Score = 26.4 bits (56), Expect = 5.0
Identities = 7/40 (17%), Positives = 15/40 (37%)
Query: 17 GIIGLIGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQH 56
G G G ++ + G V Y + + + + T +
Sbjct: 15 GHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARV 54
>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase
{Oil seed rape (Brassica napus) [TaxId: 3708]}
Length = 244
Score = 25.8 bits (56), Expect = 6.0
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 22 IGQAWAMIFASAGYKVSLYDVLSEQ 46
IG+A A+ AG KV + S +
Sbjct: 13 IGKAIALSLGKAGCKVLVNYARSAK 37
>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase
{Azoarcus sp. ebn1 [TaxId: 76114]}
Length = 247
Score = 26.0 bits (57), Expect = 6.0
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 22 IGQAWAMIFASAGYKVSLYDVLSEQ 46
IG+A A FA G +++ D++
Sbjct: 17 IGRAIAERFAVEGADIAIADLVPAP 41
>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR,
naphtol reductase) {Rice blast fungus (Magnaporthe
grisea) [TaxId: 148305]}
Length = 272
Score = 25.9 bits (56), Expect = 6.1
Identities = 12/51 (23%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Query: 22 IGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGCLKGSLS 72
IG+ AM G KV + S E+A+ + ++ C+K ++
Sbjct: 30 IGREMAMELGRRGCKVIVNYANST--ESAEEVVAAIKKNGSDAACVKANVG 78
>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium
[TaxId: 1404]}
Length = 261
Score = 25.9 bits (56), Expect = 6.3
Identities = 8/29 (27%), Positives = 15/29 (51%)
Query: 22 IGQAWAMIFASAGYKVSLYDVLSEQIENA 50
+G++ A+ FA+ KV + E N+
Sbjct: 19 LGKSMAIRFATEKAKVVVNYRSKEDEANS 47
>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli
[TaxId: 562]}
Length = 258
Score = 25.6 bits (55), Expect = 6.5
Identities = 4/45 (8%), Positives = 10/45 (22%)
Query: 22 IGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGC 66
I A G +++ + + D +
Sbjct: 19 IAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCD 63
>d1qgoa_ c.92.1.2 (A:) Cobalt chelatase CbiK {Salmonella typhimurium
[TaxId: 90371]}
Length = 257
Score = 25.7 bits (56), Expect = 6.6
Identities = 7/34 (20%), Positives = 13/34 (38%)
Query: 7 FPAQGGFYPDGIIGLIGQAWAMIFASAGYKVSLY 40
G + + G +W M F +AG + +
Sbjct: 200 MLVAGDHAINDMASDDGDSWKMRFNAAGIPATPW 233
>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase
{Pseudomonas fragi [TaxId: 296]}
Length = 260
Score = 25.5 bits (55), Expect = 7.6
Identities = 6/21 (28%), Positives = 8/21 (38%)
Query: 22 IGQAWAMIFASAGYKVSLYDV 42
IG A A+ G + L
Sbjct: 16 IGLGIATALAAQGADIVLNGF 36
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.135 0.393
Gapped
Lambda K H
0.267 0.0535 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,045,882
Number of extensions: 46424
Number of successful extensions: 254
Number of sequences better than 10.0: 1
Number of HSP's gapped: 250
Number of HSP's successfully gapped: 85
Length of query: 294
Length of database: 2,407,596
Length adjustment: 85
Effective length of query: 209
Effective length of database: 1,240,546
Effective search space: 259274114
Effective search space used: 259274114
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.3 bits)