Query psy13748
Match_columns 296
No_of_seqs 164 out of 1812
Neff 9.9
Searched_HMMs 46136
Date Fri Aug 16 19:29:08 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13748.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/13748hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK09481 sspA stringent starva 100.0 8.7E-33 1.9E-37 226.6 17.3 186 3-286 11-198 (211)
2 PLN02473 glutathione S-transfe 100.0 4.5E-32 9.8E-37 223.1 18.6 202 1-286 1-207 (214)
3 PRK13972 GSH-dependent disulfi 100.0 5.3E-32 1.2E-36 222.7 15.7 194 2-286 1-201 (215)
4 PLN02395 glutathione S-transfe 100.0 5.5E-31 1.2E-35 216.8 17.8 202 1-287 1-207 (215)
5 PRK15113 glutathione S-transfe 100.0 1.8E-30 3.9E-35 213.4 18.6 194 3-286 6-204 (214)
6 KOG0406|consensus 100.0 3.3E-30 7.1E-35 206.2 17.7 192 3-290 10-211 (231)
7 PRK10542 glutathionine S-trans 100.0 1.2E-30 2.6E-35 212.6 15.0 191 3-286 1-193 (201)
8 KOG0867|consensus 100.0 4.3E-30 9.4E-35 211.5 16.6 199 1-286 1-205 (226)
9 KOG0868|consensus 100.0 2.2E-30 4.8E-35 194.2 13.2 198 3-289 6-206 (217)
10 TIGR01262 maiA maleylacetoacet 100.0 8.2E-30 1.8E-34 209.1 16.5 200 4-289 1-203 (210)
11 COG0625 Gst Glutathione S-tran 100.0 4.3E-29 9.4E-34 204.9 18.9 192 3-285 1-199 (211)
12 PRK11752 putative S-transferas 100.0 1.2E-28 2.6E-33 208.1 18.3 194 2-286 44-254 (264)
13 PRK10357 putative glutathione 100.0 1.7E-27 3.6E-32 194.2 18.8 196 3-290 1-200 (202)
14 TIGR00862 O-ClC intracellular 99.9 1.7E-26 3.6E-31 189.8 16.8 179 8-290 16-220 (236)
15 PLN02378 glutathione S-transfe 99.9 1.9E-25 4E-30 183.3 17.0 173 7-287 16-196 (213)
16 KOG4420|consensus 99.9 4.1E-26 8.8E-31 181.2 12.3 248 3-288 27-285 (325)
17 PTZ00057 glutathione s-transfe 99.9 3.1E-25 6.8E-30 181.0 16.8 180 3-286 5-195 (205)
18 PRK10387 glutaredoxin 2; Provi 99.9 1.8E-25 4E-30 183.3 15.5 205 3-285 1-208 (210)
19 PLN02817 glutathione dehydroge 99.9 2.7E-24 5.9E-29 180.6 16.8 173 8-288 70-249 (265)
20 KOG1695|consensus 99.9 4.9E-23 1.1E-27 164.1 15.6 190 1-286 1-196 (206)
21 TIGR02182 GRXB Glutaredoxin, G 99.9 1.1E-22 2.3E-27 166.4 18.0 205 4-285 1-207 (209)
22 cd03052 GST_N_GDAP1 GST_N fami 99.8 6.7E-20 1.4E-24 123.6 8.0 73 3-75 1-73 (73)
23 PLN02907 glutamate-tRNA ligase 99.8 5.5E-19 1.2E-23 165.9 16.6 155 1-283 1-159 (722)
24 PF13417 GST_N_3: Glutathione 99.8 7.8E-19 1.7E-23 119.4 9.0 74 5-81 1-74 (75)
25 cd03045 GST_N_Delta_Epsilon GS 99.8 6.3E-19 1.4E-23 119.7 8.4 74 3-76 1-74 (74)
26 KOG1422|consensus 99.8 1.2E-17 2.7E-22 129.6 15.4 175 10-289 20-204 (221)
27 cd03048 GST_N_Ure2p_like GST_N 99.8 1.3E-18 2.7E-23 120.3 9.0 77 2-79 1-80 (81)
28 cd03050 GST_N_Theta GST_N fami 99.8 1.5E-18 3.3E-23 118.4 8.9 76 3-78 1-76 (76)
29 cd03041 GST_N_2GST_N GST_N fam 99.8 1.7E-18 3.7E-23 118.3 8.3 75 2-78 1-77 (77)
30 cd03053 GST_N_Phi GST_N family 99.8 2.8E-18 6E-23 117.1 8.5 75 3-77 2-76 (76)
31 cd03059 GST_N_SspA GST_N famil 99.8 4.7E-18 1E-22 115.0 8.7 73 3-78 1-73 (73)
32 cd03056 GST_N_4 GST_N family, 99.8 4.1E-18 8.8E-23 115.4 8.1 73 3-75 1-73 (73)
33 cd03047 GST_N_2 GST_N family, 99.7 6.6E-18 1.4E-22 114.2 8.1 73 3-75 1-73 (73)
34 cd03058 GST_N_Tau GST_N family 99.7 9.3E-18 2E-22 113.9 8.7 73 3-78 1-74 (74)
35 cd03051 GST_N_GTT2_like GST_N 99.7 8.8E-18 1.9E-22 114.0 7.6 73 3-75 1-74 (74)
36 cd03057 GST_N_Beta GST_N famil 99.7 1.5E-17 3.4E-22 113.7 8.7 76 3-79 1-77 (77)
37 cd03061 GST_N_CLIC GST_N famil 99.7 1.2E-17 2.6E-22 115.8 8.0 69 9-80 20-88 (91)
38 PF02798 GST_N: Glutathione S- 99.7 1.9E-17 4.2E-22 112.6 8.5 74 1-76 1-76 (76)
39 cd03046 GST_N_GTT1_like GST_N 99.7 2.2E-17 4.8E-22 112.6 8.8 76 3-79 1-76 (76)
40 cd03042 GST_N_Zeta GST_N famil 99.7 1.5E-17 3.3E-22 112.5 7.9 73 3-75 1-73 (73)
41 cd03076 GST_N_Pi GST_N family, 99.7 1.3E-17 2.8E-22 112.7 7.1 72 2-76 1-72 (73)
42 cd03044 GST_N_EF1Bgamma GST_N 99.7 2.5E-17 5.5E-22 111.9 8.1 73 3-76 1-74 (75)
43 cd03060 GST_N_Omega_like GST_N 99.7 5.8E-17 1.3E-21 109.0 8.1 69 3-74 1-70 (71)
44 cd03039 GST_N_Sigma_like GST_N 99.7 6.4E-17 1.4E-21 109.1 6.9 72 3-76 1-72 (72)
45 KOG4244|consensus 99.7 7.9E-16 1.7E-20 123.8 13.2 211 3-279 46-272 (281)
46 cd03075 GST_N_Mu GST_N family, 99.7 1.8E-16 4E-21 109.4 8.1 76 3-78 1-82 (82)
47 cd03055 GST_N_Omega GST_N fami 99.7 1.5E-16 3.3E-21 111.7 7.8 71 2-75 18-89 (89)
48 cd03037 GST_N_GRX2 GST_N famil 99.7 1.6E-16 3.4E-21 106.9 7.4 70 3-76 1-71 (71)
49 cd03080 GST_N_Metaxin_like GST 99.7 3.4E-16 7.4E-21 106.3 7.7 68 2-79 1-75 (75)
50 cd03049 GST_N_3 GST_N family, 99.7 2.8E-16 6E-21 106.3 7.2 70 3-75 1-73 (73)
51 cd03038 GST_N_etherase_LigE GS 99.7 2.9E-16 6.2E-21 109.2 7.4 70 9-79 14-84 (84)
52 cd03077 GST_N_Alpha GST_N fami 99.6 9.7E-16 2.1E-20 105.0 8.8 71 3-79 2-77 (79)
53 PF13409 GST_N_2: Glutathione 99.6 5E-16 1.1E-20 103.9 7.0 68 10-77 1-70 (70)
54 cd03040 GST_N_mPGES2 GST_N fam 99.6 7.6E-16 1.7E-20 105.3 7.4 72 3-79 2-77 (77)
55 KOG3029|consensus 99.6 1.9E-14 4.1E-19 116.4 15.4 224 3-279 91-354 (370)
56 cd03043 GST_N_1 GST_N family, 99.6 4.4E-15 9.5E-20 100.2 7.2 68 7-75 6-73 (73)
57 COG2999 GrxB Glutaredoxin 2 [P 99.5 3.3E-13 7.1E-18 102.0 14.7 200 3-283 1-206 (215)
58 cd00570 GST_N_family Glutathio 99.5 2.4E-14 5.2E-19 95.6 7.8 71 3-75 1-71 (71)
59 COG0435 ECM4 Predicted glutath 99.5 2E-14 4.4E-19 116.1 8.6 141 139-286 127-282 (324)
60 cd03054 GST_N_Metaxin GST_N fa 99.5 4.7E-14 1E-18 95.0 7.3 65 3-77 1-72 (72)
61 KOG2903|consensus 99.5 4.8E-14 1E-18 112.9 8.1 144 139-286 121-284 (319)
62 KOG0868|consensus 99.5 1.2E-13 2.5E-18 104.6 6.7 144 109-260 25-172 (217)
63 KOG3027|consensus 99.5 9.2E-13 2E-17 102.0 11.8 208 9-279 32-247 (257)
64 PRK09481 sspA stringent starva 99.4 5.1E-13 1.1E-17 109.5 10.0 119 128-260 46-165 (211)
65 PRK10542 glutathionine S-trans 99.4 9.7E-13 2.1E-17 107.0 10.1 138 112-260 22-162 (201)
66 cd03196 GST_C_5 GST_C family, 99.4 4.3E-12 9.2E-17 93.6 10.1 109 175-286 2-113 (115)
67 cd03177 GST_C_Delta_Epsilon GS 99.4 2.7E-12 5.8E-17 95.2 8.6 111 179-291 2-114 (118)
68 TIGR01262 maiA maleylacetoacet 99.4 4.2E-12 9.1E-17 104.0 10.5 128 129-261 40-170 (210)
69 cd03189 GST_C_GTT1_like GST_C 99.3 1.4E-11 3E-16 91.4 10.1 108 174-282 2-119 (119)
70 cd03188 GST_C_Beta GST_C famil 99.3 4.4E-12 9.6E-17 93.3 6.7 107 179-286 2-112 (114)
71 cd03186 GST_C_SspA GST_N famil 99.3 1.3E-11 2.8E-16 89.8 8.3 103 178-286 2-105 (107)
72 cd03079 GST_N_Metaxin2 GST_N f 99.3 9.3E-12 2E-16 82.9 6.6 60 9-77 15-74 (74)
73 cd03180 GST_C_2 GST_C family, 99.3 5.3E-11 1.2E-15 86.9 10.6 105 179-284 2-110 (110)
74 cd03182 GST_C_GTT2_like GST_C 99.3 4.3E-11 9.3E-16 88.5 9.5 108 176-284 1-117 (117)
75 cd03191 GST_C_Zeta GST_C famil 99.3 1.3E-11 2.8E-16 92.0 6.3 111 178-289 2-118 (121)
76 cd03178 GST_C_Ure2p_like GST_C 99.2 1.5E-11 3.2E-16 90.4 6.3 108 179-287 1-111 (113)
77 cd03190 GST_C_ECM4_like GST_C 99.2 5.9E-11 1.3E-15 90.9 8.0 104 178-286 3-114 (142)
78 KOG0406|consensus 99.2 7.6E-11 1.7E-15 95.1 8.6 119 129-257 45-165 (231)
79 cd03185 GST_C_Tau GST_C family 99.2 1.1E-10 2.5E-15 87.4 8.8 106 178-289 2-114 (126)
80 cd03187 GST_C_Phi GST_C family 99.2 1.1E-10 2.4E-15 86.4 7.3 107 179-286 2-116 (118)
81 cd03198 GST_C_CLIC GST_C famil 99.1 3E-10 6.4E-15 85.0 8.5 79 209-288 22-122 (134)
82 cd03200 GST_C_JTV1 GST_C famil 99.1 4.2E-10 9.1E-15 80.0 8.3 95 159-279 1-95 (96)
83 cd03203 GST_C_Lambda GST_C fam 99.1 9.2E-10 2E-14 81.7 9.9 101 176-289 1-110 (120)
84 cd03206 GST_C_7 GST_C family, 99.1 3.1E-10 6.7E-15 81.5 6.9 70 214-284 31-100 (100)
85 cd03181 GST_C_EFB1gamma GST_C 99.1 4E-10 8.8E-15 84.0 7.7 106 180-286 2-112 (123)
86 cd03195 GST_C_4 GST_C family, 99.1 7.9E-10 1.7E-14 81.3 8.9 105 178-286 2-109 (114)
87 cd03184 GST_C_Omega GST_C fami 99.1 7E-10 1.5E-14 82.9 8.5 101 179-287 2-110 (124)
88 cd03207 GST_C_8 GST_C family, 99.1 2.4E-10 5.2E-15 82.5 5.7 97 185-287 3-99 (103)
89 TIGR02190 GlrX-dom Glutaredoxi 99.0 9.2E-10 2E-14 75.3 7.3 71 2-75 9-79 (79)
90 PF00043 GST_C: Glutathione S- 99.0 1.3E-09 2.7E-14 77.4 7.5 68 214-282 26-95 (95)
91 TIGR00862 O-ClC intracellular 99.0 1.6E-09 3.5E-14 89.4 9.0 113 129-260 47-179 (236)
92 cd03183 GST_C_Theta GST_C fami 99.0 5.4E-10 1.2E-14 83.8 5.7 110 180-289 2-121 (126)
93 PRK10638 glutaredoxin 3; Provi 99.0 1.9E-09 4.2E-14 74.5 7.6 72 1-74 1-73 (83)
94 cd03179 GST_C_1 GST_C family, 99.0 5E-10 1.1E-14 81.0 4.6 100 179-278 2-105 (105)
95 cd03209 GST_C_Mu GST_C family, 99.0 1.7E-09 3.7E-14 80.5 7.6 72 214-286 33-105 (121)
96 cd03204 GST_C_GDAP1 GST_C fami 99.0 2.6E-09 5.7E-14 77.4 7.7 71 213-284 26-111 (111)
97 cd03078 GST_N_Metaxin1_like GS 99.0 3.1E-09 6.8E-14 71.2 7.3 58 10-77 15-72 (73)
98 COG0625 Gst Glutathione S-tran 98.9 1.6E-09 3.4E-14 88.8 6.5 136 118-261 28-170 (211)
99 cd03201 GST_C_DHAR GST_C famil 98.9 6.5E-09 1.4E-13 77.1 9.1 74 215-289 29-109 (121)
100 KOG0867|consensus 98.9 2.4E-09 5.1E-14 88.4 6.0 139 119-262 31-173 (226)
101 PF02798 GST_N: Glutathione S- 98.9 1.4E-09 3E-14 73.8 3.4 45 119-164 29-76 (76)
102 PLN02378 glutathione S-transfe 98.9 5.8E-09 1.3E-13 85.6 7.2 109 129-261 48-159 (213)
103 PLN02395 glutathione S-transfe 98.9 9.5E-09 2.1E-13 84.4 8.0 144 113-260 25-172 (215)
104 cd03210 GST_C_Pi GST_C family, 98.8 8.8E-09 1.9E-13 77.2 7.0 71 215-286 34-108 (126)
105 PRK13972 GSH-dependent disulfi 98.8 5.1E-09 1.1E-13 86.1 5.8 139 113-260 24-170 (215)
106 PLN02473 glutathione S-transfe 98.8 1.5E-08 3.2E-13 83.2 8.6 146 112-261 25-174 (214)
107 PRK15113 glutathione S-transfe 98.8 9.7E-09 2.1E-13 84.3 7.5 141 113-260 31-175 (214)
108 cd03029 GRX_hybridPRX5 Glutare 98.8 2.3E-08 5E-13 67.0 7.5 71 2-75 2-72 (72)
109 cd03052 GST_N_GDAP1 GST_N fami 98.8 3.6E-09 7.9E-14 71.1 3.6 43 120-163 30-73 (73)
110 cd03208 GST_C_Alpha GST_C fami 98.8 1E-08 2.3E-13 77.9 6.3 66 220-286 43-111 (137)
111 KOG3028|consensus 98.8 6.1E-07 1.3E-11 74.9 16.8 208 10-279 16-233 (313)
112 cd03194 GST_C_3 GST_C family, 98.8 3.1E-08 6.8E-13 72.8 8.3 69 214-286 39-110 (114)
113 PF13410 GST_C_2: Glutathione 98.8 1.7E-08 3.7E-13 67.0 6.2 63 214-276 4-69 (69)
114 cd03046 GST_N_GTT1_like GST_N 98.8 1.1E-08 2.4E-13 69.3 4.8 47 120-167 29-76 (76)
115 cd03057 GST_N_Beta GST_N famil 98.8 9.4E-09 2E-13 69.9 4.3 48 119-167 28-77 (77)
116 PLN02817 glutathione dehydroge 98.7 4.6E-08 1E-12 82.5 8.9 110 128-260 100-210 (265)
117 cd03050 GST_N_Theta GST_N fami 98.7 1.1E-08 2.5E-13 69.3 4.2 46 120-166 30-76 (76)
118 cd03027 GRX_DEP Glutaredoxin ( 98.7 4.9E-08 1.1E-12 65.6 7.0 66 3-70 3-68 (73)
119 cd03048 GST_N_Ure2p_like GST_N 98.7 1.7E-08 3.6E-13 69.4 4.6 47 120-167 30-80 (81)
120 PF13409 GST_N_2: Glutathione 98.7 1.9E-08 4.1E-13 67.0 4.6 55 110-165 14-70 (70)
121 PRK10329 glutaredoxin-like pro 98.7 6.8E-08 1.5E-12 66.1 7.1 62 1-65 1-62 (81)
122 cd03075 GST_N_Mu GST_N family, 98.7 2.6E-08 5.5E-13 68.6 4.8 54 112-166 23-82 (82)
123 PF14497 GST_C_3: Glutathione 98.7 1.4E-08 3E-13 72.7 3.4 64 214-279 33-99 (99)
124 cd03045 GST_N_Delta_Epsilon GS 98.7 2.3E-08 5E-13 67.4 3.8 44 120-164 30-74 (74)
125 cd00299 GST_C_family Glutathio 98.7 3.4E-08 7.3E-13 70.4 4.7 64 214-277 34-100 (100)
126 TIGR02182 GRXB Glutaredoxin, G 98.6 8.3E-08 1.8E-12 78.5 7.4 121 134-262 39-180 (209)
127 PRK11752 putative S-transferas 98.6 9.9E-08 2.1E-12 80.8 8.0 134 119-260 78-216 (264)
128 COG0695 GrxC Glutaredoxin and 98.6 1.8E-07 3.8E-12 63.9 7.7 65 1-66 1-66 (80)
129 cd03197 GST_C_mPGES2 GST_C fam 98.6 2.9E-07 6.2E-12 69.7 9.4 71 209-279 72-145 (149)
130 TIGR02196 GlrX_YruB Glutaredox 98.6 1.5E-07 3.2E-12 63.1 7.2 71 2-74 1-73 (74)
131 cd02066 GRX_family Glutaredoxi 98.6 1.8E-07 3.9E-12 62.3 7.5 69 2-72 1-69 (72)
132 cd03059 GST_N_SspA GST_N famil 98.6 5.5E-08 1.2E-12 65.3 4.8 38 128-166 36-73 (73)
133 cd03202 GST_C_etherase_LigE GS 98.6 1.5E-07 3.2E-12 70.2 7.6 66 214-279 56-123 (124)
134 cd03053 GST_N_Phi GST_N family 98.6 4E-08 8.6E-13 66.6 4.1 44 120-164 31-75 (76)
135 cd03043 GST_N_1 GST_N family, 98.6 3.9E-08 8.4E-13 66.1 3.6 43 120-163 31-73 (73)
136 PF13417 GST_N_3: Glutathione 98.6 6.1E-08 1.3E-12 65.5 4.5 46 122-168 28-73 (75)
137 cd03061 GST_N_CLIC GST_N famil 98.6 7.1E-08 1.5E-12 67.1 4.8 41 128-168 48-88 (91)
138 cd03047 GST_N_2 GST_N family, 98.6 4.4E-08 9.4E-13 65.8 3.4 42 121-163 31-73 (73)
139 cd02976 NrdH NrdH-redoxin (Nrd 98.6 1.9E-07 4.1E-12 62.4 6.6 62 3-66 2-63 (73)
140 cd03192 GST_C_Sigma_like GST_C 98.6 6.8E-08 1.5E-12 69.7 4.7 64 214-277 37-104 (104)
141 cd03044 GST_N_EF1Bgamma GST_N 98.6 4.8E-08 1E-12 66.0 3.2 44 120-164 30-74 (75)
142 cd03193 GST_C_Metaxin GST_C fa 98.6 2.4E-07 5.2E-12 64.6 6.7 63 216-278 19-88 (88)
143 cd03418 GRX_GRXb_1_3_like Glut 98.5 5E-07 1.1E-11 60.9 7.4 70 3-74 2-72 (75)
144 cd03076 GST_N_Pi GST_N family, 98.5 1.1E-07 2.3E-12 63.9 3.6 34 130-164 39-72 (73)
145 cd03056 GST_N_4 GST_N family, 98.5 1.1E-07 2.3E-12 63.8 3.6 43 120-163 30-73 (73)
146 PLN02907 glutamate-tRNA ligase 98.5 2.9E-07 6.3E-12 87.5 7.7 96 136-260 32-128 (722)
147 cd03041 GST_N_2GST_N GST_N fam 98.5 1.1E-07 2.4E-12 64.6 3.4 45 121-166 30-77 (77)
148 cd03042 GST_N_Zeta GST_N famil 98.5 1.6E-07 3.6E-12 62.9 3.7 49 113-163 24-73 (73)
149 PRK11200 grxA glutaredoxin 1; 98.5 1.2E-06 2.7E-11 60.6 8.1 77 1-79 1-84 (85)
150 cd03038 GST_N_etherase_LigE GS 98.5 2.6E-07 5.6E-12 63.9 4.7 46 121-167 38-84 (84)
151 TIGR02200 GlrX_actino Glutared 98.5 7.7E-07 1.7E-11 60.2 6.9 70 3-74 2-75 (77)
152 PTZ00057 glutathione s-transfe 98.4 7.7E-07 1.7E-11 72.5 7.5 110 135-260 52-163 (205)
153 cd03058 GST_N_Tau GST_N family 98.4 3.3E-07 7.3E-12 61.7 4.4 37 129-166 37-74 (74)
154 cd03039 GST_N_Sigma_like GST_N 98.4 2.5E-07 5.3E-12 61.9 3.7 34 130-164 39-72 (72)
155 PF00462 Glutaredoxin: Glutare 98.4 8.4E-07 1.8E-11 57.0 5.9 60 3-64 1-60 (60)
156 TIGR02181 GRX_bact Glutaredoxi 98.4 1.4E-06 3.1E-11 59.4 7.4 71 3-75 1-71 (79)
157 TIGR02194 GlrX_NrdH Glutaredox 98.4 1.1E-06 2.4E-11 58.8 6.5 57 3-62 1-57 (72)
158 cd03080 GST_N_Metaxin_like GST 98.4 4.2E-07 9.2E-12 61.3 4.3 34 134-167 42-75 (75)
159 cd03077 GST_N_Alpha GST_N fami 98.4 4.5E-07 9.8E-12 61.9 4.3 31 137-167 47-77 (79)
160 cd03211 GST_C_Metaxin2 GST_C f 98.4 5.3E-07 1.1E-11 67.4 4.8 65 214-278 55-126 (126)
161 TIGR02183 GRXA Glutaredoxin, G 98.3 3.4E-06 7.4E-11 58.5 7.8 75 3-79 2-83 (86)
162 PRK10357 putative glutathione 98.3 1.5E-06 3.2E-11 70.7 6.8 126 130-262 38-164 (202)
163 cd03212 GST_C_Metaxin1_3 GST_C 98.3 1.7E-06 3.7E-11 65.6 6.6 66 214-279 62-134 (137)
164 KOG1695|consensus 98.3 1.3E-06 2.9E-11 70.1 5.8 117 134-260 44-163 (206)
165 PF14834 GST_C_4: Glutathione 98.3 7.2E-06 1.6E-10 58.4 8.6 107 176-286 1-110 (117)
166 cd03205 GST_C_6 GST_C family, 98.2 3.4E-06 7.4E-11 60.1 6.5 61 214-277 35-98 (98)
167 cd03051 GST_N_GTT2_like GST_N 98.2 9E-07 2E-11 59.3 3.3 49 113-163 24-74 (74)
168 cd03060 GST_N_Omega_like GST_N 98.2 1.2E-06 2.5E-11 58.4 3.7 33 129-162 37-70 (71)
169 cd03049 GST_N_3 GST_N family, 98.2 1.1E-06 2.5E-11 58.8 3.2 35 128-163 38-73 (73)
170 cd03419 GRX_GRXh_1_2_like Glut 98.2 8.4E-06 1.8E-10 55.8 7.4 74 3-76 2-76 (82)
171 TIGR02189 GlrX-like_plant Glut 98.2 9.6E-06 2.1E-10 57.8 7.6 72 2-73 9-81 (99)
172 KOG4420|consensus 98.2 6.7E-06 1.5E-10 66.7 7.1 58 118-175 54-111 (325)
173 PRK10387 glutaredoxin 2; Provi 98.2 2.9E-06 6.3E-11 69.3 5.2 122 134-262 40-181 (210)
174 PHA03050 glutaredoxin; Provisi 98.1 1.4E-05 3.1E-10 57.7 7.5 70 3-72 15-88 (108)
175 cd03079 GST_N_Metaxin2 GST_N f 98.1 4.6E-06 1E-10 55.6 3.6 30 135-164 44-73 (74)
176 cd03055 GST_N_Omega GST_N fami 98.0 6.5E-06 1.4E-10 57.5 3.6 33 130-163 56-89 (89)
177 TIGR02180 GRX_euk Glutaredoxin 98.0 4.9E-05 1.1E-09 52.2 7.5 74 3-76 1-77 (84)
178 TIGR00365 monothiol glutaredox 97.9 8E-05 1.7E-09 52.8 7.7 69 3-73 14-87 (97)
179 PF10568 Tom37: Outer mitochon 97.9 7.3E-05 1.6E-09 49.6 6.9 55 10-74 13-71 (72)
180 cd03028 GRX_PICOT_like Glutare 97.9 9.9E-05 2.1E-09 51.6 7.8 70 2-73 9-83 (90)
181 cd03037 GST_N_GRX2 GST_N famil 97.9 1.2E-05 2.6E-10 53.5 2.8 31 134-164 40-71 (71)
182 cd03054 GST_N_Metaxin GST_N fa 97.8 1.9E-05 4.2E-10 52.6 3.6 30 135-164 42-71 (72)
183 cd03040 GST_N_mPGES2 GST_N fam 97.8 2.4E-05 5.2E-10 52.9 3.8 32 135-166 41-76 (77)
184 cd00570 GST_N_family Glutathio 97.6 6.9E-05 1.5E-09 49.0 3.0 30 134-163 42-71 (71)
185 PRK12759 bifunctional gluaredo 97.4 0.00058 1.3E-08 61.5 7.7 69 1-72 1-79 (410)
186 cd03031 GRX_GRX_like Glutaredo 97.3 0.0012 2.6E-08 50.4 7.6 69 3-73 2-80 (147)
187 PRK01655 spxA transcriptional 96.9 0.0015 3.3E-08 49.0 4.1 32 3-34 2-33 (131)
188 COG1393 ArsC Arsenate reductas 96.8 0.0017 3.6E-08 47.5 4.1 34 1-34 1-34 (117)
189 PRK10824 glutaredoxin-4; Provi 96.8 0.008 1.7E-07 43.8 7.4 69 3-73 17-90 (115)
190 cd03036 ArsC_like Arsenate Red 96.8 0.0018 3.9E-08 47.1 3.9 32 3-34 1-32 (111)
191 cd03078 GST_N_Metaxin1_like GS 96.8 0.0021 4.5E-08 42.9 3.8 31 135-165 42-72 (73)
192 cd03032 ArsC_Spx Arsenate Redu 96.7 0.0022 4.8E-08 47.0 4.2 32 3-34 2-33 (115)
193 KOG1752|consensus 96.7 0.013 2.9E-07 41.7 7.6 71 3-73 16-87 (104)
194 cd02977 ArsC_family Arsenate R 96.6 0.0028 6.1E-08 45.6 4.1 32 3-34 1-32 (105)
195 cd02973 TRX_GRX_like Thioredox 96.6 0.012 2.6E-07 38.2 6.6 57 3-65 3-64 (67)
196 PRK13344 spxA transcriptional 96.5 0.0035 7.7E-08 47.0 4.2 32 3-34 2-33 (132)
197 KOG1422|consensus 96.4 0.0041 8.9E-08 49.4 4.1 116 126-260 45-164 (221)
198 PRK10026 arsenate reductase; P 96.4 0.0044 9.6E-08 46.8 4.1 34 1-34 1-35 (141)
199 PRK12559 transcriptional regul 96.4 0.0048 1E-07 46.3 4.2 33 2-34 1-33 (131)
200 PTZ00062 glutaredoxin; Provisi 96.4 0.017 3.6E-07 46.7 7.5 68 3-72 115-187 (204)
201 cd03199 GST_C_GRX2 GST_C famil 96.4 0.1 2.2E-06 38.6 11.0 67 214-284 58-125 (128)
202 PF04399 Glutaredoxin2_C: Glut 96.3 0.034 7.4E-07 41.5 8.2 67 214-284 57-124 (132)
203 TIGR01617 arsC_related transcr 96.2 0.0074 1.6E-07 44.3 4.1 32 3-34 1-32 (117)
204 COG4545 Glutaredoxin-related p 96.2 0.018 4E-07 37.6 5.2 65 1-65 1-77 (85)
205 cd03035 ArsC_Yffb Arsenate Red 96.1 0.0089 1.9E-07 43.0 4.1 32 3-34 1-32 (105)
206 cd03033 ArsC_15kD Arsenate Red 96.0 0.0089 1.9E-07 43.5 3.8 32 3-34 2-33 (113)
207 PRK10853 putative reductase; P 95.9 0.01 2.2E-07 43.6 3.8 32 3-34 2-33 (118)
208 cd03030 GRX_SH3BGR Glutaredoxi 95.7 0.076 1.6E-06 37.1 7.2 68 3-72 2-79 (92)
209 PF04908 SH3BGR: SH3-binding, 95.7 0.052 1.1E-06 38.4 6.3 70 1-72 1-85 (99)
210 COG2999 GrxB Glutaredoxin 2 [P 95.3 0.02 4.3E-07 44.3 3.4 52 140-195 46-98 (215)
211 TIGR00412 redox_disulf_2 small 95.2 0.14 3E-06 34.3 6.9 57 1-65 1-61 (76)
212 TIGR01616 nitro_assoc nitrogen 95.2 0.03 6.4E-07 41.6 3.9 32 3-34 3-34 (126)
213 cd03034 ArsC_ArsC Arsenate Red 94.8 0.046 1E-06 39.7 4.0 31 3-33 1-31 (112)
214 TIGR00014 arsC arsenate reduct 94.7 0.05 1.1E-06 39.7 4.0 32 3-34 1-32 (114)
215 PF10568 Tom37: Outer mitochon 94.6 0.052 1.1E-06 36.0 3.5 29 134-162 42-71 (72)
216 KOG1147|consensus 94.3 0.012 2.5E-07 53.3 -0.1 106 149-278 45-153 (712)
217 PF05768 DUF836: Glutaredoxin- 93.6 0.41 8.8E-06 32.4 6.5 54 3-61 2-57 (81)
218 PHA02125 thioredoxin-like prot 93.4 0.3 6.5E-06 32.5 5.6 53 2-60 1-53 (75)
219 PF11287 DUF3088: Protein of u 93.0 0.38 8.3E-06 34.4 5.6 68 10-80 23-109 (112)
220 TIGR00411 redox_disulf_1 small 92.9 0.6 1.3E-05 31.2 6.7 56 3-62 3-62 (82)
221 cd03026 AhpF_NTD_C TRX-GRX-lik 92.5 0.7 1.5E-05 31.9 6.5 57 3-65 16-77 (89)
222 PF13192 Thioredoxin_3: Thiore 92.4 1.4 3.1E-05 29.3 7.8 59 1-67 1-63 (76)
223 cd01659 TRX_superfamily Thiore 91.7 0.58 1.3E-05 28.7 5.2 53 3-58 1-58 (69)
224 TIGR02190 GlrX-dom Glutaredoxi 89.5 0.25 5.3E-06 33.3 1.8 42 121-163 38-79 (79)
225 PF03960 ArsC: ArsC family; I 88.3 0.58 1.3E-05 33.8 3.3 29 6-34 1-29 (110)
226 COG0278 Glutaredoxin-related p 86.6 2.8 6E-05 29.4 5.5 66 7-73 26-91 (105)
227 KOG4244|consensus 77.7 7.2 0.00016 32.7 5.7 38 134-171 86-123 (281)
228 PF09635 MetRS-N: MetRS-N bind 77.7 1.1 2.3E-05 32.7 0.9 34 134-167 28-63 (122)
229 TIGR01295 PedC_BrcD bacterioci 77.2 13 0.00029 27.2 6.7 62 3-64 27-103 (122)
230 cd03029 GRX_hybridPRX5 Glutare 74.6 2.7 5.8E-05 27.4 2.1 30 134-163 43-72 (72)
231 cd02947 TRX_family TRX family; 72.0 25 0.00055 23.1 6.9 54 3-62 14-74 (93)
232 cd02953 DsbDgamma DsbD gamma f 71.4 13 0.00029 26.0 5.4 55 3-58 15-77 (104)
233 TIGR03140 AhpF alkyl hydropero 70.1 7.3 0.00016 36.5 4.7 70 3-76 121-197 (515)
234 TIGR03143 AhpF_homolog putativ 70.1 15 0.00033 34.8 6.8 57 3-65 480-541 (555)
235 PF11801 Tom37_C: Tom37 C-term 70.0 9.4 0.0002 29.9 4.6 40 220-259 112-155 (168)
236 PRK15317 alkyl hydroperoxide r 69.9 7.5 0.00016 36.4 4.7 71 3-77 120-197 (517)
237 KOG3028|consensus 69.5 14 0.00031 31.7 5.7 62 134-198 42-107 (313)
238 PF11287 DUF3088: Protein of u 68.9 6.3 0.00014 28.3 3.0 17 151-167 92-108 (112)
239 PF09635 MetRS-N: MetRS-N bind 68.3 3 6.4E-05 30.5 1.3 31 50-80 32-64 (122)
240 KOG2501|consensus 66.7 17 0.00037 28.0 5.2 45 3-47 36-88 (157)
241 cd02949 TRX_NTR TRX domain, no 66.4 34 0.00075 23.5 6.5 58 3-64 17-80 (97)
242 KOG3029|consensus 65.1 55 0.0012 27.9 8.1 29 139-167 134-162 (370)
243 TIGR02196 GlrX_YruB Glutaredox 64.4 6.3 0.00014 25.2 2.3 29 134-162 43-73 (74)
244 cd02989 Phd_like_TxnDC9 Phosdu 59.6 63 0.0014 23.2 7.1 57 3-65 26-89 (113)
245 PRK10638 glutaredoxin 3; Provi 56.8 12 0.00026 25.1 2.7 32 130-162 42-73 (83)
246 PF00043 GST_C: Glutathione S- 56.0 9.2 0.0002 26.1 2.0 40 221-260 26-66 (95)
247 PF13410 GST_C_2: Glutathione 54.2 16 0.00034 23.3 2.8 42 218-261 4-45 (69)
248 PF01323 DSBA: DSBA-like thior 48.7 30 0.00065 27.2 4.2 35 3-37 2-41 (193)
249 cd02975 PfPDO_like_N Pyrococcu 46.1 62 0.0013 23.2 5.1 52 3-58 25-80 (113)
250 cd03188 GST_C_Beta GST_C famil 44.5 26 0.00056 24.6 2.9 23 237-259 58-80 (114)
251 cd02984 TRX_PICOT TRX domain, 42.7 1E+02 0.0023 20.7 7.0 58 3-64 18-81 (97)
252 TIGR02183 GRXA Glutaredoxin, G 42.3 38 0.00081 22.9 3.3 29 139-167 55-83 (86)
253 KOG3027|consensus 42.0 73 0.0016 25.8 5.1 32 135-166 61-92 (257)
254 PF00085 Thioredoxin: Thioredo 41.9 1.1E+02 0.0024 20.7 8.2 69 3-75 21-101 (103)
255 PHA02278 thioredoxin-like prot 41.7 1.2E+02 0.0027 21.3 7.1 63 3-65 18-86 (103)
256 PRK09266 hypothetical protein; 41.7 56 0.0012 27.5 4.9 60 20-79 200-259 (266)
257 cd04911 ACT_AKiii-YclM-BS_1 AC 40.4 30 0.00066 23.1 2.4 25 10-34 14-38 (76)
258 TIGR02187 GlrX_arch Glutaredox 39.9 87 0.0019 25.4 5.7 53 3-59 137-192 (215)
259 cd02963 TRX_DnaJ TRX domain, D 39.9 1.3E+02 0.0029 21.2 6.6 57 3-63 28-91 (111)
260 COG0435 ECM4 Predicted glutath 39.5 53 0.0012 27.9 4.2 107 3-111 52-192 (324)
261 cd02959 ERp19 Endoplasmic reti 39.4 55 0.0012 23.7 4.0 60 3-66 23-92 (117)
262 PRK11200 grxA glutaredoxin 1; 39.1 59 0.0013 21.7 3.9 29 139-167 56-84 (85)
263 PTZ00051 thioredoxin; Provisio 37.9 1.3E+02 0.0028 20.4 6.6 57 3-63 22-83 (98)
264 cd03189 GST_C_GTT1_like GST_C 37.4 36 0.00078 24.2 2.8 25 86-110 2-26 (119)
265 cd03179 GST_C_1 GST_C family, 37.1 47 0.001 22.8 3.3 24 237-260 58-81 (105)
266 COG3019 Predicted metal-bindin 37.0 64 0.0014 24.3 3.9 70 3-78 28-104 (149)
267 cd02997 PDI_a_PDIR PDIa family 35.0 88 0.0019 21.4 4.4 54 3-58 21-80 (104)
268 TIGR02187 GlrX_arch Glutaredox 33.7 1.8E+02 0.004 23.5 6.6 56 3-62 23-88 (215)
269 cd03025 DsbA_FrnE_like DsbA fa 32.2 78 0.0017 24.8 4.2 35 1-35 1-41 (193)
270 cd02951 SoxW SoxW family; SoxW 31.8 1.9E+02 0.0042 20.7 6.2 16 3-18 18-33 (125)
271 cd02956 ybbN ybbN protein fami 31.5 1.4E+02 0.003 20.1 4.9 57 3-63 16-78 (96)
272 cd03187 GST_C_Phi GST_C family 31.3 76 0.0017 22.3 3.7 22 237-258 60-81 (118)
273 KOG2824|consensus 31.1 93 0.002 26.4 4.4 59 13-73 149-211 (281)
274 cd03020 DsbA_DsbC_DsbG DsbA fa 30.9 67 0.0015 25.6 3.6 32 3-34 81-114 (197)
275 PF11823 DUF3343: Protein of u 30.8 82 0.0018 20.5 3.4 34 1-34 1-34 (73)
276 TIGR02681 phage_pRha phage reg 30.3 50 0.0011 23.7 2.4 26 54-79 2-28 (108)
277 cd03208 GST_C_Alpha GST_C fami 30.2 60 0.0013 24.2 3.0 36 224-261 43-80 (137)
278 PF09413 DUF2007: Domain of un 29.8 52 0.0011 20.9 2.3 32 3-34 1-32 (67)
279 COG2761 FrnE Predicted dithiol 29.7 42 0.00091 27.6 2.1 58 3-80 8-69 (225)
280 cd02948 TRX_NDPK TRX domain, T 29.5 1.2E+02 0.0026 21.0 4.3 57 3-64 21-84 (102)
281 cd02972 DsbA_family DsbA famil 29.0 80 0.0017 20.9 3.3 33 3-35 1-39 (98)
282 KOG0911|consensus 28.2 1.8E+02 0.004 23.9 5.5 64 7-72 150-213 (227)
283 cd03022 DsbA_HCCA_Iso DsbA fam 28.1 84 0.0018 24.5 3.7 33 3-35 1-37 (192)
284 cd03021 DsbA_GSTK DsbA family, 26.8 99 0.0022 24.9 3.9 33 3-35 3-39 (209)
285 cd02957 Phd_like Phosducin (Ph 26.6 1.5E+02 0.0033 20.9 4.6 59 3-66 28-91 (113)
286 PRK11657 dsbG disulfide isomer 26.5 94 0.002 26.1 3.8 31 3-33 121-155 (251)
287 cd02952 TRP14_like Human TRX-r 26.3 2.6E+02 0.0057 20.4 6.3 58 9-66 38-105 (119)
288 PF04134 DUF393: Protein of un 26.2 2.2E+02 0.0048 20.0 5.4 71 5-76 1-76 (114)
289 cd03209 GST_C_Mu GST_C family, 26.0 78 0.0017 22.7 2.9 43 216-260 31-73 (121)
290 COG5494 Predicted thioredoxin/ 25.6 1.8E+02 0.0038 23.8 4.8 58 1-63 11-69 (265)
291 PF09314 DUF1972: Domain of un 25.1 60 0.0013 25.9 2.3 20 60-79 154-173 (185)
292 cd03190 GST_C_ECM4_like GST_C 25.0 1.1E+02 0.0024 22.8 3.7 40 221-260 35-75 (142)
293 cd03198 GST_C_CLIC GST_C famil 24.4 78 0.0017 23.7 2.7 45 214-260 23-83 (134)
294 PF00731 AIRC: AIR carboxylase 23.5 1.7E+02 0.0037 22.4 4.3 38 10-47 12-49 (150)
295 KOG4023|consensus 23.4 1.1E+02 0.0024 21.5 3.0 35 2-36 3-43 (108)
296 cd03024 DsbA_FrnE DsbA family, 23.0 1.1E+02 0.0025 24.0 3.6 33 3-35 1-41 (201)
297 PRK10877 protein disulfide iso 22.7 1.3E+02 0.0029 24.8 4.0 22 3-24 111-132 (232)
298 cd02987 Phd_like_Phd Phosducin 22.2 3E+02 0.0064 21.6 5.7 59 3-66 87-150 (175)
299 KOG3425|consensus 21.5 2.6E+02 0.0057 20.6 4.7 68 8-76 42-121 (128)
300 PHA03075 glutaredoxin-like pro 20.9 1.7E+02 0.0036 21.4 3.5 63 3-76 5-68 (123)
301 cd02962 TMX2 TMX2 family; comp 20.2 4E+02 0.0087 20.3 6.8 59 3-65 51-122 (152)
No 1
>PRK09481 sspA stringent starvation protein A; Provisional
Probab=100.00 E-value=8.7e-33 Score=226.63 Aligned_cols=186 Identities=18% Similarity=0.250 Sum_probs=152.0
Q ss_pred cEEEecCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEeeCCeeeeecHHHHHHHHHhcCCCC
Q psy13748 3 LILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDGDLIVWDSHAINAYLVSAYGKND 82 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~~es~~I~~yl~~~~~~~~ 82 (296)
++||+++.|++|++|+++|+++|++|+.+.++. ++.+++|+++||.|+||+|++||.+|+||.+|++||+++++. .
T Consensus 11 ~~Ly~~~~s~~~~rv~~~L~e~gl~~e~~~v~~---~~~~~~~~~~nP~g~VPvL~~~g~~l~ES~AIl~YL~~~~~~-~ 86 (211)
T PRK09481 11 MTLFSGPTDIYSHQVRIVLAEKGVSVEIEQVEK---DNLPQDLIDLNPYQSVPTLVDRELTLYESRIIMEYLDERFPH-P 86 (211)
T ss_pred eEEeCCCCChhHHHHHHHHHHCCCCCEEEeCCc---ccCCHHHHHhCCCCCCCEEEECCEEeeCHHHHHHHHHHhCCC-C
Confidence 899999999999999999999999999999987 345789999999999999999999999999999999999986 3
Q ss_pred CCCCCCHHHHHHHhhhhhccccchhhhhhhhccCcceEeeccCCCCCCccccccCCCCCccEEEeCCEEeeccHHHHHHH
Q psy13748 83 ALYPKDPKVRALVDQRLHFDSGVLFSALRNIGVSKTFCSDLYLGWIPINFSPQLNPQHTVPTLEDGDLIVWDSHAINAYL 162 (296)
Q Consensus 83 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~nP~~~vP~L~~~g~~l~es~aI~~yl 162 (296)
.|+|.++.+|+.++.|+.+..+.+.....
T Consensus 87 ~l~p~~~~~ra~~~~~~~~~~~~~~~~~~--------------------------------------------------- 115 (211)
T PRK09481 87 PLMPVYPVARGESRLMMHRIEKDWYSLMN--------------------------------------------------- 115 (211)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHH---------------------------------------------------
Confidence 68898888888888887654332211000
Q ss_pred HHHhCCCCCCCCCCHHHHHHHHhHHhhccchhhhHHHHhhhhhhccCCcCCcHHHHHHHHHHHHHHHHHcCCCCCcCCCc
Q psy13748 163 VSAYGKNDALYPKDPKVRALVDQRLHFDSGVLFSALRNIGLKIFFKNEKEIPEEDKLRAREALDFAEKFLQGRKFITGDT 242 (296)
Q Consensus 163 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~g~~ 242 (296)
. + . .......+...+.+...+..++++|++++|++|++
T Consensus 116 -------------------------------------~-~---~-~~~~~~~~~~~~~l~~~l~~le~~L~~~~~l~G~~ 153 (211)
T PRK09481 116 -------------------------------------K-I---V-NGSASEADAARKQLREELLAIAPVFGEKPYFMSEE 153 (211)
T ss_pred -------------------------------------H-H---h-cCCHHHHHHHHHHHHHHHHHHHHHhccCCcccCCC
Confidence 0 0 0 00011123445678888899999999889999999
Q ss_pred ccchhHhHHHHHHHHHhhCCCC--CCchhHHHHHHHHhccccCccc
Q psy13748 243 YNIADFSIYTTASALVALVPGL--EKYPNLAKYFDLCKSSFKGISH 286 (296)
Q Consensus 243 ~t~aD~~~~~~l~~~~~~~~~~--~~~p~l~~~~~~~~~~~p~~~~ 286 (296)
+|+||+.+++.+.+....++++ ..+|+|.+|++++.+ +|++++
T Consensus 154 ~t~AD~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~-rp~~~~ 198 (211)
T PRK09481 154 FSLVDCYLAPLLWRLPVLGIELSGPGAKELKGYMTRVFE-RDSFLA 198 (211)
T ss_pred ccHHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHHHHhc-cHHHHH
Confidence 9999999999998777666653 579999999999999 999998
No 2
>PLN02473 glutathione S-transferase
Probab=100.00 E-value=4.5e-32 Score=223.12 Aligned_cols=202 Identities=24% Similarity=0.317 Sum_probs=157.0
Q ss_pred CccEEEecCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEeeCCeeeeecHHHHHHHHHhcCC
Q psy13748 1 MGLILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDGDLIVWDSHAINAYLVSAYGK 80 (296)
Q Consensus 1 M~~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~~es~~I~~yl~~~~~~ 80 (296)
|.+|||+++.|++++||+++|+++||+|+.+.++..++++.+++|+++||.|+||+|++||.+|+||.+|++||++++++
T Consensus 1 ~~~kLy~~~~s~~~~rv~~~L~e~gi~ye~~~v~~~~~~~~~~~~~~~nP~g~vP~L~~~g~~l~ES~aI~~YL~~~~~~ 80 (214)
T PLN02473 1 MVVKVYGQIKAANPQRVLLCFLEKGIEFEVIHVDLDKLEQKKPEHLLRQPFGQVPAIEDGDLKLFESRAIARYYATKYAD 80 (214)
T ss_pred CceEEecCCCCCchHHHHHHHHHcCCCceEEEecCcccccCCHHHHhhCCCCCCCeEEECCEEEEehHHHHHHHHHHcCC
Confidence 77999999999999999999999999999999999888888999999999999999999999999999999999999975
Q ss_pred C-CCCCCCCHHHHHHHhhhhhccccchhhhhhhhccCcceEeeccCCCCCCccccccCCCCCccEEEeCCEEeeccHHHH
Q psy13748 81 N-DALYPKDPKVRALVDQRLHFDSGVLFSALRNIGVSKTFCSDLYLGWIPINFSPQLNPQHTVPTLEDGDLIVWDSHAIN 159 (296)
Q Consensus 81 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~nP~~~vP~L~~~g~~l~es~aI~ 159 (296)
. ..|+|.++.+|+++++|+.+..+.+.+.....
T Consensus 81 ~~~~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~---------------------------------------------- 114 (214)
T PLN02473 81 QGTDLLGKTLEHRAIVDQWVEVENNYFYAVALPL---------------------------------------------- 114 (214)
T ss_pred cCCCCCCCCHHHHHHHHHHHHHHHhcccHHHHHH----------------------------------------------
Confidence 3 35888888888888888876655332110000
Q ss_pred HHHHHHhCCCCCCCCCCHHHHHHHHhHHhhccchhhhHHHHhhhhhhccCC-cCCcHHHHHHHHHHHHHHHHHcCCCCCc
Q psy13748 160 AYLVSAYGKNDALYPKDPKVRALVDQRLHFDSGVLFSALRNIGLKIFFKNE-KEIPEEDKLRAREALDFAEKFLQGRKFI 238 (296)
Q Consensus 160 ~yl~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~le~~L~~~~~l 238 (296)
+ ....+........ ....+.....+.+.++.+|+.|++++|+
T Consensus 115 -----------------------~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l 157 (214)
T PLN02473 115 -----------------------V--------------INLVFKPRLGEPCDVALVEELKVKFDKVLDVYENRLATNRYL 157 (214)
T ss_pred -----------------------H--------------HHHHhcccccCCCChHHHHHHHHHHHHHHHHHHHHhccCCcc
Confidence 0 0000000000000 1112334567888899999999988999
Q ss_pred CCCcccchhHhHHHHHHHHHhh-CC--CCCCchhHHHHHHHHhccccCccc
Q psy13748 239 TGDTYNIADFSIYTTASALVAL-VP--GLEKYPNLAKYFDLCKSSFKGISH 286 (296)
Q Consensus 239 ~g~~~t~aD~~~~~~l~~~~~~-~~--~~~~~p~l~~~~~~~~~~~p~~~~ 286 (296)
+|+++|+||+.+++.+.+.... .. .++.+|+|.+|++++.+ +|+|++
T Consensus 158 ~Gd~~t~ADi~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~-~p~~~~ 207 (214)
T PLN02473 158 GGDEFTLADLTHMPGMRYIMNETSLSGLVTSRENLNRWWNEISA-RPAWKK 207 (214)
T ss_pred cCCCCCHHHHHHHHHHHHHHhccccHHHHhcCHHHHHHHHHHhc-ChhhHH
Confidence 9999999999999988765432 11 15789999999999999 999997
No 3
>PRK13972 GSH-dependent disulfide bond oxidoreductase; Provisional
Probab=100.00 E-value=5.3e-32 Score=222.72 Aligned_cols=194 Identities=22% Similarity=0.330 Sum_probs=151.6
Q ss_pred ccEEEecCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEee-----CC--eeeeecHHHHHHH
Q psy13748 2 GLILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLED-----GD--LIVWDSHAINAYL 74 (296)
Q Consensus 2 ~~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~-----~~--~~~~es~~I~~yl 74 (296)
|+|||+.+ +++|++|+++|+++||+|+.+.+++..+++..++|+++||.|+||+|++ || .+|+||.+|++||
T Consensus 1 m~~Ly~~~-~~~~~~v~~~L~e~gl~~e~~~v~~~~~~~~~~~~~~iNP~gkVP~L~~~~~~d~g~~~~L~ES~AI~~YL 79 (215)
T PRK13972 1 MIDLYFAP-TPNGHKITLFLEEAELDYRLIKVDLGKGGQFRPEFLRISPNNKIPAIVDHSPADGGEPLSLFESGAILLYL 79 (215)
T ss_pred CeEEEECC-CCChHHHHHHHHHcCCCcEEEEecCcccccCCHHHHhhCcCCCCCEEEeCCCCCCCCceeEEcHHHHHHHH
Confidence 37999887 7899999999999999999999999877778899999999999999986 45 4799999999999
Q ss_pred HHhcCCCCCCCCCCHHHHHHHhhhhhccccchhhhhhhhccCcceEeeccCCCCCCccccccCCCCCccEEEeCCEEeec
Q psy13748 75 VSAYGKNDALYPKDPKVRALVDQRLHFDSGVLFSALRNIGVSKTFCSDLYLGWIPINFSPQLNPQHTVPTLEDGDLIVWD 154 (296)
Q Consensus 75 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~nP~~~vP~L~~~g~~l~e 154 (296)
+++++ .+.|.++.+|+++++|+.+..+.+.+.+....+
T Consensus 80 ~~~~~---~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~--------------------------------------- 117 (215)
T PRK13972 80 AEKTG---LFLSHETRERAATLQWLFWQVGGLGPMLGQNHH--------------------------------------- 117 (215)
T ss_pred HHhcC---CCCCCCHHHHHHHHHHHHHHhhccCcceeeeee---------------------------------------
Confidence 99986 477888999999999998876654321110000
Q ss_pred cHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhHHhhccchhhhHHHHhhhhhhccCCcCCcHHHHHHHHHHHHHHHHHcCC
Q psy13748 155 SHAINAYLVSAYGKNDALYPKDPKVRALVDQRLHFDSGVLFSALRNIGLKIFFKNEKEIPEEDKLRAREALDFAEKFLQG 234 (296)
Q Consensus 155 s~aI~~yl~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~ 234 (296)
+.. ... .......+...+.+.+.+..+|++|++
T Consensus 118 -----------~~~------~~~------------------------------~~~~~~~~~~~~~~~~~l~~le~~L~~ 150 (215)
T PRK13972 118 -----------FNH------AAP------------------------------QTIPYAIERYQVETQRLYHVLNKRLEN 150 (215)
T ss_pred -----------eec------cCC------------------------------CCCchHHHHHHHHHHHHHHHHHHHhcc
Confidence 000 000 000111223445688889999999998
Q ss_pred CCCcCCCcccchhHhHHHHHHHHHhhCCCCCCchhHHHHHHHHhccccCccc
Q psy13748 235 RKFITGDTYNIADFSIYTTASALVALVPGLEKYPNLAKYFDLCKSSFKGISH 286 (296)
Q Consensus 235 ~~~l~g~~~t~aD~~~~~~l~~~~~~~~~~~~~p~l~~~~~~~~~~~p~~~~ 286 (296)
++|++|+++|+||+++++.+......+.....||+|.+|++++.+ +|++++
T Consensus 151 ~~~l~Gd~~t~ADi~l~~~~~~~~~~~~~~~~~P~l~~w~~r~~~-rp~~~~ 201 (215)
T PRK13972 151 SPWLGGENYSIADIACWPWVNAWTRQRIDLAMYPAVKNWHERIRS-RPATGQ 201 (215)
T ss_pred CccccCCCCCHHHHHHHHHHHHHhhcCCcchhCHHHHHHHHHHHh-CHHHHH
Confidence 899999999999999988775544445557889999999999999 999988
No 4
>PLN02395 glutathione S-transferase
Probab=99.97 E-value=5.5e-31 Score=216.83 Aligned_cols=202 Identities=23% Similarity=0.298 Sum_probs=155.2
Q ss_pred CccEEEecCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEeeCCeeeeecHHHHHHHHHhcCC
Q psy13748 1 MGLILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDGDLIVWDSHAINAYLVSAYGK 80 (296)
Q Consensus 1 M~~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~~es~~I~~yl~~~~~~ 80 (296)
|++|||+.+.| +++|++++|+++|++|+.+.+++..+++.+++|+++||.|+||+|+++|.+|+||.+|++||+++++.
T Consensus 1 ~~~~ly~~~~~-~~~rv~~~L~e~gl~~e~~~v~~~~~~~~~~~~~~~nP~g~vP~L~~~~~~l~ES~aI~~YL~~~~~~ 79 (215)
T PLN02395 1 MVLKVYGPAFA-SPKRALVTLIEKGVEFETVPVDLMKGEHKQPEYLALQPFGVVPVIVDGDYKIFESRAIMRYYAEKYRS 79 (215)
T ss_pred CeEEEEcCCcC-cHHHHHHHHHHcCCCceEEEeccccCCcCCHHHHhhCCCCCCCEEEECCEEEEcHHHHHHHHHHHcCC
Confidence 88999997665 58999999999999999999998777777899999999999999999999999999999999999975
Q ss_pred C-CCCCCCCHHHHHHHhhhhhccccchhhhhhhhccCcceEeeccCCCCCCccccccCCCCCccEEEeCCEEeeccHHHH
Q psy13748 81 N-DALYPKDPKVRALVDQRLHFDSGVLFSALRNIGVSKTFCSDLYLGWIPINFSPQLNPQHTVPTLEDGDLIVWDSHAIN 159 (296)
Q Consensus 81 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~nP~~~vP~L~~~g~~l~es~aI~ 159 (296)
. +.|+|.++.+++++++|+.+..+.+.+.+...
T Consensus 80 ~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------------------------- 113 (215)
T PLN02395 80 QGPDLLGKTIEERGQVEQWLDVEATSYHPPLLNL---------------------------------------------- 113 (215)
T ss_pred CCcCcCCCChhHHHHHHHHHHHHHHhcCchHHHH----------------------------------------------
Confidence 3 35889888899999998887665443211100
Q ss_pred HHHHHHhCCCCCCCCCCHHHHHHHHhHHhhccchhhhHHHHhhhhhh-ccCCcCCcHHHHHHHHHHHHHHHHHcCCCCCc
Q psy13748 160 AYLVSAYGKNDALYPKDPKVRALVDQRLHFDSGVLFSALRNIGLKIF-FKNEKEIPEEDKLRAREALDFAEKFLQGRKFI 238 (296)
Q Consensus 160 ~yl~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l 238 (296)
.. ...+.... ............+.+.+.++.+|++|++++|+
T Consensus 114 ----------------------~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l 156 (215)
T PLN02395 114 ----------------------TL---------------HILFASKMGFPADEKVIKESEEKLAKVLDVYEARLSKSKYL 156 (215)
T ss_pred ----------------------HH---------------HHHhhhhccCCCcHHHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 00 00000000 00011112344567888999999999988999
Q ss_pred CCCcccchhHhHHHHHHHHHhh-C--CCCCCchhHHHHHHHHhccccCcccC
Q psy13748 239 TGDTYNIADFSIYTTASALVAL-V--PGLEKYPNLAKYFDLCKSSFKGISHD 287 (296)
Q Consensus 239 ~g~~~t~aD~~~~~~l~~~~~~-~--~~~~~~p~l~~~~~~~~~~~p~~~~~ 287 (296)
+|+++|+||+.+++.+.++... + ..+..+|+|.+|++++.+ +|++++.
T Consensus 157 ~G~~~s~ADi~l~~~~~~~~~~~~~~~~~~~~p~L~~w~~~~~~-rp~~k~~ 207 (215)
T PLN02395 157 AGDFVSLADLAHLPFTEYLVGPIGKAYLIKDRKHVSAWWDDISS-RPAWKEV 207 (215)
T ss_pred cCCCcCHHHHHHHHHHHHHhcccchhhhhccCchHHHHHHHHHc-ChHHHHH
Confidence 9999999999998887665332 2 125779999999999999 9999983
No 5
>PRK15113 glutathione S-transferase; Provisional
Probab=99.97 E-value=1.8e-30 Score=213.37 Aligned_cols=194 Identities=24% Similarity=0.266 Sum_probs=153.8
Q ss_pred cEEEecC--CCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEeeCCeeeeecHHHHHHHHHhcCC
Q psy13748 3 LILHEII--ASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDGDLIVWDSHAINAYLVSAYGK 80 (296)
Q Consensus 3 ~~Ly~~~--~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~~es~~I~~yl~~~~~~ 80 (296)
++||+.+ .|++|++++++|+++||+|+.+.+++.++++..++|+++||.|+||+|++||.+|+||.+|++||++++++
T Consensus 6 ~~Ly~~~~~~s~~~~rv~~~l~e~gi~~e~~~v~~~~~~~~~~~~~~~nP~g~VP~L~~~~~~l~ES~aI~~YL~~~~~~ 85 (214)
T PRK15113 6 ITLYSDAHFFSPYVMSAFVALQEKGLPFELKTVDLDAGEHLQPTYQGYSLTRRVPTLQHDDFELSESSAIAEYLEERFAP 85 (214)
T ss_pred EEEEeCCCCCCchHHHHHHHHHHcCCCCeEEEeCCCCccccCHHHHhcCCCCCCCEEEECCEEEecHHHHHHHHHHHcCC
Confidence 8999976 79999999999999999999999999888888899999999999999999999999999999999999986
Q ss_pred CC--CCCCCCHHHHHHHhhhhhccccchhhhhhhhccCcceEeeccCCCCCCccccccCCCCCccEEEeCCEEeeccHHH
Q psy13748 81 ND--ALYPKDPKVRALVDQRLHFDSGVLFSALRNIGVSKTFCSDLYLGWIPINFSPQLNPQHTVPTLEDGDLIVWDSHAI 158 (296)
Q Consensus 81 ~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~nP~~~vP~L~~~g~~l~es~aI 158 (296)
.. .++|.++.+|+.+++|+.+..+.+.......
T Consensus 86 ~~~~~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~--------------------------------------------- 120 (214)
T PRK15113 86 PAWERIYPADLQARARARQIQAWLRSDLMPLREER--------------------------------------------- 120 (214)
T ss_pred CCccccCCCCHHHHHHHHHHHHHHHhhhHHHhccC---------------------------------------------
Confidence 42 2889888999999988887765332100000
Q ss_pred HHHHHHHhCCCCCCCCCCHHHHHHHHhHHhhccchhhhHHHHhhhhhhccCCcCCcHHHHHHHHHHHHHHHHHcCC-CCC
Q psy13748 159 NAYLVSAYGKNDALYPKDPKVRALVDQRLHFDSGVLFSALRNIGLKIFFKNEKEIPEEDKLRAREALDFAEKFLQG-RKF 237 (296)
Q Consensus 159 ~~yl~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~-~~~ 237 (296)
. ....+.. .......+...+.+.+.+..++++|++ +.|
T Consensus 121 -----------------------------------~---~~~~~~~---~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~ 159 (214)
T PRK15113 121 -----------------------------------P---TDVVFAG---AKKAPLSEAGKAAAEKLFAVAERLLAPGQPN 159 (214)
T ss_pred -----------------------------------c---cchhccC---CCCCcccHHHHHHHHHHHHHHHHHHhcCCCE
Confidence 0 0000000 111223455667788999999999974 579
Q ss_pred cCCCcccchhHhHHHHHHHHHhhCCCCCCchhHHHHHHHHhccccCccc
Q psy13748 238 ITGDTYNIADFSIYTTASALVALVPGLEKYPNLAKYFDLCKSSFKGISH 286 (296)
Q Consensus 238 l~g~~~t~aD~~~~~~l~~~~~~~~~~~~~p~l~~~~~~~~~~~p~~~~ 286 (296)
++|+ +|+||+.+++.+.+....+..+. |+|.+|++|+.+ +|+|++
T Consensus 160 l~G~-~TlADi~l~~~l~~~~~~~~~~~--p~l~~~~~r~~~-rp~~~~ 204 (214)
T PRK15113 160 LFGE-WCIADTDLALMLNRLVLHGDEVP--ERLADYATFQWQ-RASVQR 204 (214)
T ss_pred eeCC-ccHHHHHHHHHHHHHHHcCCCCC--HHHHHHHHHHhc-CHHHHH
Confidence 9996 99999999999987765555432 999999999999 999998
No 6
>KOG0406|consensus
Probab=99.97 E-value=3.3e-30 Score=206.17 Aligned_cols=192 Identities=24% Similarity=0.272 Sum_probs=158.9
Q ss_pred cEEEecCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhC-CCccccEEeeCCeeeeecHHHHHHHHHhcCCC
Q psy13748 3 LILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLN-PQHTVPTLEDGDLIVWDSHAINAYLVSAYGKN 81 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~-p~~~vP~l~~~~~~~~es~~I~~yl~~~~~~~ 81 (296)
++||++..||+++|++++|++|||+|+.+.+|+. ++++++++.| +.++||||+++|.+|+||..|++||++.++++
T Consensus 10 vrL~~~w~sPfa~R~~iaL~~KgI~yE~veedl~---~Ks~~ll~~np~hkKVPvL~Hn~k~i~ESliiveYiDe~w~~~ 86 (231)
T KOG0406|consen 10 VKLLGMWFSPFAQRVRIALKLKGIPYEYVEEDLT---NKSEWLLEKNPVHKKVPVLEHNGKPICESLIIVEYIDETWPSG 86 (231)
T ss_pred EEEEEeecChHHHHHHHHHHhcCCceEEEecCCC---CCCHHHHHhccccccCCEEEECCceehhhHHHHHHHHhhccCC
Confidence 7999999999999999999999999999999984 3689999999 78999999999999999999999999999977
Q ss_pred CCCCCCCHHHHHHHhhhhhccccchhhhhhhhccCcceEeeccCCCCCCccccccCCCCCccEEEeCCEEeeccHHHHHH
Q psy13748 82 DALYPKDPKVRALVDQRLHFDSGVLFSALRNIGVSKTFCSDLYLGWIPINFSPQLNPQHTVPTLEDGDLIVWDSHAINAY 161 (296)
Q Consensus 82 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~nP~~~vP~L~~~g~~l~es~aI~~y 161 (296)
++++|.||.+|++.+.|..+++..++.....+
T Consensus 87 ~~iLP~DPy~Ra~arfwa~~id~~~~~~~~~~------------------------------------------------ 118 (231)
T KOG0406|consen 87 PPILPSDPYERAQARFWAEYIDKKVFFVGRFV------------------------------------------------ 118 (231)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHhHHHHHHHHH------------------------------------------------
Confidence 78999999999999999887776433211111
Q ss_pred HHHHhCCCCCCCCCCHHHHHHHHhHHhhccchhhhHHHHhhhhhhccCCcCCcHHHHHHHHHHHHHHHHHcC-CCCCcCC
Q psy13748 162 LVSAYGKNDALYPKDPKVRALVDQRLHFDSGVLFSALRNIGLKIFFKNEKEIPEEDKLRAREALDFAEKFLQ-GRKFITG 240 (296)
Q Consensus 162 l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~-~~~~l~g 240 (296)
.........+...+.+.+.+..+|+.|. +++|+.|
T Consensus 119 --------------------------------------------~~~~~~e~~~~~~~e~~e~l~~lE~el~k~k~~fgG 154 (231)
T KOG0406|consen 119 --------------------------------------------VAAKGGEEQEAAKEELREALKVLEEELGKGKDFFGG 154 (231)
T ss_pred --------------------------------------------HhhcCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 0011122245667789999999999999 7899999
Q ss_pred CcccchhHhHHHHHHHHHhh----C---CC-CCCchhHHHHHHHHhccccCcccCCCC
Q psy13748 241 DTYNIADFSIYTTASALVAL----V---PG-LEKYPNLAKYFDLCKSSFKGISHDEEG 290 (296)
Q Consensus 241 ~~~t~aD~~~~~~l~~~~~~----~---~~-~~~~p~l~~~~~~~~~~~p~~~~~~~~ 290 (296)
+++++.|+++++.+...... + +. ...+|+|.+|.++|.+ ++++++..+.
T Consensus 155 ~~~G~vDi~~~p~~~~~~~~~~~~~~~~~~~~~~~P~L~~W~~~~~~-~~~V~~~~p~ 211 (231)
T KOG0406|consen 155 ETIGFVDIAIGPSFERWLAVLEKFGGVKFIIEEETPKLIKWIKRMKE-DEAVKAVLPD 211 (231)
T ss_pred CCcCHhhhhHHhhHHHHHHHHHHhcCcccCCCCCCccHHHHHHHHhc-ChhHHhhcCC
Confidence 99999999999877665554 2 22 5789999999999999 9999984443
No 7
>PRK10542 glutathionine S-transferase; Provisional
Probab=99.97 E-value=1.2e-30 Score=212.63 Aligned_cols=191 Identities=20% Similarity=0.312 Sum_probs=150.8
Q ss_pred cEEEecCCCchhHHHHHHHHHhCCceeEEEecccccc-cchHHHHhhCCCccccEEe-eCCeeeeecHHHHHHHHHhcCC
Q psy13748 3 LILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLARE-QFSDEYLKLNPQHTVPTLE-DGDLIVWDSHAINAYLVSAYGK 80 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~-~~~~~~~~~~p~~~vP~l~-~~~~~~~es~~I~~yl~~~~~~ 80 (296)
|+||+.+.| ++++++++|+++||+|+.+.+++.+++ ..+++|+++||.|+||+|+ +||.+|+||.+|++||++++++
T Consensus 1 m~l~~~~~s-~~~~~~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~~nP~g~vPvL~~~~g~~l~eS~aI~~YL~~~~~~ 79 (201)
T PRK10542 1 MKLFYKPGA-CSLASHITLRESGLDFTLVSVDLAKKRLENGDDYLAINPKGQVPALLLDDGTLLTEGVAIMQYLADSVPD 79 (201)
T ss_pred CceeecccH-HHHHHHHHHHHcCCCceEEEeecccccccCChHHHHhCcCCCCCeEEeCCCcEeecHHHHHHHHHHhCcc
Confidence 589999877 699999999999999999999987653 4568999999999999998 6889999999999999999986
Q ss_pred CCCCCCCCHHHHHHHhhhhhccccchhhhhhhhccCcceEeeccCCCCCCccccccCCCCCccEEEeCCEEeeccHHHHH
Q psy13748 81 NDALYPKDPKVRALVDQRLHFDSGVLFSALRNIGVSKTFCSDLYLGWIPINFSPQLNPQHTVPTLEDGDLIVWDSHAINA 160 (296)
Q Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~nP~~~vP~L~~~g~~l~es~aI~~ 160 (296)
...+.|.++.+|+.++.|+.+..+.+.+.+..+
T Consensus 80 ~~l~~p~~~~~ra~~~~~~~~~~~~~~~~~~~~----------------------------------------------- 112 (201)
T PRK10542 80 RQLLAPVGSLSRYHTIEWLNYIATELHKGFTPL----------------------------------------------- 112 (201)
T ss_pred cccCCCCCcHHHHHHHHHHHHHHhhhhhhhhhc-----------------------------------------------
Confidence 533346678888888888876655433211100
Q ss_pred HHHHHhCCCCCCCCCCHHHHHHHHhHHhhccchhhhHHHHhhhhhhccCCcCCcHHHHHHHHHHHHHHHHHcCCCCCcCC
Q psy13748 161 YLVSAYGKNDALYPKDPKVRALVDQRLHFDSGVLFSALRNIGLKIFFKNEKEIPEEDKLRAREALDFAEKFLQGRKFITG 240 (296)
Q Consensus 161 yl~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~g 240 (296)
+.+.. .........+.+.+.++.+|++|++++||+|
T Consensus 113 -----------~~~~~---------------------------------~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G 148 (201)
T PRK10542 113 -----------FRPDT---------------------------------PEEYKPTVRAQLEKKFQYVDEALADEQWICG 148 (201)
T ss_pred -----------cCCCC---------------------------------hHHHHHHHHHHHHHHHHHHHHHhcCCCeeeC
Confidence 00000 0000123346688889999999998899999
Q ss_pred CcccchhHhHHHHHHHHHhhCCCCCCchhHHHHHHHHhccccCccc
Q psy13748 241 DTYNIADFSIYTTASALVALVPGLEKYPNLAKYFDLCKSSFKGISH 286 (296)
Q Consensus 241 ~~~t~aD~~~~~~l~~~~~~~~~~~~~p~l~~~~~~~~~~~p~~~~ 286 (296)
+++|+||+.+++.+.+....+.....+|+|.+|++++.+ +|++++
T Consensus 149 ~~~s~ADi~l~~~~~~~~~~~~~~~~~p~l~~w~~~~~~-~p~~k~ 193 (201)
T PRK10542 149 QRFTIADAYLFTVLRWAYAVKLNLEGLEHIAAYMQRVAE-RPAVAA 193 (201)
T ss_pred CCCcHHhHHHHHHHHHhhccCCCcccchHHHHHHHHHHc-CHHHHH
Confidence 999999999999888776666667789999999999999 999998
No 8
>KOG0867|consensus
Probab=99.97 E-value=4.3e-30 Score=211.53 Aligned_cols=199 Identities=40% Similarity=0.579 Sum_probs=164.5
Q ss_pred CccEEEecCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEeeCCeeeeecHHHHHHHHHhcCC
Q psy13748 1 MGLILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDGDLIVWDSHAINAYLVSAYGK 80 (296)
Q Consensus 1 M~~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~~es~~I~~yl~~~~~~ 80 (296)
|.++||+++.|+.|++|.++++++|++|+.+.++...+++.+++|+++||.|+||+|++||..++||+||+.||.++|+.
T Consensus 1 ~~~~ly~~~~s~~~r~vl~~~~~~~l~~e~~~v~~~~ge~~~pefl~~nP~~kVP~l~d~~~~l~eS~AI~~Yl~~ky~~ 80 (226)
T KOG0867|consen 1 MKLKLYGHLGSPPARAVLIAAKELGLEVELKPVDLVKGEQKSPEFLKLNPLGKVPALEDGGLTLWESHAILRYLAEKYGP 80 (226)
T ss_pred CCceEeecCCCcchHHHHHHHHHcCCceeEEEeeccccccCCHHHHhcCcCCCCCeEecCCeEEeeHHHHHHHHHHHcCC
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999982
Q ss_pred CCC-CCCCCHHHHHHHhhhhhccccchhhhhhhhccCcceEeeccCCCCCCccccccCCCCCccEEEeCCEEeeccHHHH
Q psy13748 81 NDA-LYPKDPKVRALVDQRLHFDSGVLFSALRNIGVSKTFCSDLYLGWIPINFSPQLNPQHTVPTLEDGDLIVWDSHAIN 159 (296)
Q Consensus 81 ~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~nP~~~vP~L~~~g~~l~es~aI~ 159 (296)
... ++|.++..|+.+++|+.+..+.+.+...
T Consensus 81 ~~~~l~p~~~~~ra~v~~~l~~~~~~l~~~~~------------------------------------------------ 112 (226)
T KOG0867|consen 81 LGGILLPKDLKERAIVDQWLEFENGVLDPVTF------------------------------------------------ 112 (226)
T ss_pred CCcccCCcCHHHHHHHHHHHHhhhcccccccc------------------------------------------------
Confidence 234 8888888888888888777765542100
Q ss_pred HHHHHHhCCCCCCCCCCHHHHHHHHhHHhhccchhhhHHHHhhhh-hhccC-CcCCcHHHHHHHHHHHHHHHHHcCCCCC
Q psy13748 160 AYLVSAYGKNDALYPKDPKVRALVDQRLHFDSGVLFSALRNIGLK-IFFKN-EKEIPEEDKLRAREALDFAEKFLQGRKF 237 (296)
Q Consensus 160 ~yl~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~l~~le~~L~~~~~ 237 (296)
.+..+.+ ..... ...........++..++.+|.+|.++.|
T Consensus 113 --------------------------------------~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~~~y 154 (226)
T KOG0867|consen 113 --------------------------------------ERPILAPLLVGLPLNPTAVKELEAKLRKALDNLERFLKTQVY 154 (226)
T ss_pred --------------------------------------cceeeecceecccCcchhhHHHHHHHHHHHHHHHHHHccCCc
Confidence 0111111 11111 2333566778899999999999999999
Q ss_pred cCCCcccchhHhHHHHHHHHH--hh-CCCCCCchhHHHHHHHHhccccCccc
Q psy13748 238 ITGDTYNIADFSIYTTASALV--AL-VPGLEKYPNLAKYFDLCKSSFKGISH 286 (296)
Q Consensus 238 l~g~~~t~aD~~~~~~l~~~~--~~-~~~~~~~p~l~~~~~~~~~~~p~~~~ 286 (296)
++|+++|+||+.+++.+..+. .. ......+|++.+|++++.+ +|++++
T Consensus 155 l~g~~~tlADl~~~~~~~~~~~~~~~~~~~~~~p~v~~W~~~~~~-~P~~~e 205 (226)
T KOG0867|consen 155 LAGDQLTLADLSLASTLSQFQGKFATEKDFEKYPKVARWYERIQK-RPAYEE 205 (226)
T ss_pred ccCCcccHHHHHHhhHHHHHhHhhhhhhhhhhChHHHHHHHHHHh-CccHHH
Confidence 999999999999999998873 33 3337889999999999999 999887
No 9
>KOG0868|consensus
Probab=99.97 E-value=2.2e-30 Score=194.25 Aligned_cols=198 Identities=25% Similarity=0.301 Sum_probs=165.8
Q ss_pred cEEEecCCCchhHHHHHHHHHhCCceeEEEeccccc-ccchHHHHhhCCCccccEEeeCCeeeeecHHHHHHHHHhcCCC
Q psy13748 3 LILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAR-EQFSDEYLKLNPQHTVPTLEDGDLIVWDSHAINAYLVSAYGKN 81 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~-~~~~~~~~~~~p~~~vP~l~~~~~~~~es~~I~~yl~~~~~~~ 81 (296)
.+||.+-.|.+++|||++|+.|||+|+.++|++.++ .+.+.+|.++||.++||+|++||.+++||.||+.||++.+|+
T Consensus 6 piLYSYWrSSCswRVRiALaLK~iDYey~PvnLlk~~~q~~~ef~~iNPm~kVP~L~i~g~tl~eS~AII~YLeEt~P~- 84 (217)
T KOG0868|consen 6 PILYSYWRSSCSWRVRIALALKGIDYEYKPVNLLKEEDQSDSEFKEINPMEKVPTLVIDGLTLTESLAIIEYLEETYPD- 84 (217)
T ss_pred chhhhhhcccchHHHHHHHHHcCCCcceeehhhhcchhhhhhHHhhcCchhhCCeEEECCEEeehHHHHHHHHHhcCCC-
Confidence 789999999999999999999999999999999886 666689999999999999999999999999999999999998
Q ss_pred CCCCCCCHHHHHHHhhhhhccccchhhhhhhhccCcceEeeccCCCCCCccccccCCCCCccEEEeCCEEeeccHHHHHH
Q psy13748 82 DALYPKDPKVRALVDQRLHFDSGVLFSALRNIGVSKTFCSDLYLGWIPINFSPQLNPQHTVPTLEDGDLIVWDSHAINAY 161 (296)
Q Consensus 82 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~nP~~~vP~L~~~g~~l~es~aI~~y 161 (296)
++|+|+|+..|+.+++....+.+.+.+. +..+++.|
T Consensus 85 ppLLP~d~~KRA~~r~i~~~i~sgIQPl--------------------------------------------QNl~vl~~ 120 (217)
T KOG0868|consen 85 PPLLPKDPHKRAKARAISLLIASGIQPL--------------------------------------------QNLSVLKM 120 (217)
T ss_pred CCCCCcCHHHHHHHHHHHHHHHhCCCcc--------------------------------------------hhhHHHHH
Confidence 4899999999999999999888876542 12445555
Q ss_pred HHHHhCCCCCCCCCCHHHHHHHHhHHhhccchhhhHHHHhhhhhhccCCcCCcHHHHHHHHHHHHHHHHHcCC--CCCcC
Q psy13748 162 LVSAYGKNDALYPKDPKVRALVDQRLHFDSGVLFSALRNIGLKIFFKNEKEIPEEDKLRAREALDFAEKFLQG--RKFIT 239 (296)
Q Consensus 162 l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~--~~~l~ 239 (296)
+.++.+. .-..| ....+.+.+..+|+.|.. ++|..
T Consensus 121 l~ek~~~-------------~~~~W------------------------------~q~~ItkGF~ALEklL~~~aGkycv 157 (217)
T KOG0868|consen 121 LNEKEPG-------------YGDQW------------------------------AQHFITKGFTALEKLLKSHAGKYCV 157 (217)
T ss_pred hcccccc-------------hhhHH------------------------------HHHHHHHhHHHHHHHHHHccCCccc
Confidence 5443321 00111 123566778888888874 68999
Q ss_pred CCcccchhHhHHHHHHHHHhhCCCCCCchhHHHHHHHHhccccCcccCCC
Q psy13748 240 GDTYNIADFSIYTTASALVALVPGLEKYPNLAKYFDLCKSSFKGISHDEE 289 (296)
Q Consensus 240 g~~~t~aD~~~~~~l~~~~~~~~~~~~~p~l~~~~~~~~~~~p~~~~~~~ 289 (296)
||..|+||+.+.+.+........++..||.+.+..+.+.+ .|.|+.+.+
T Consensus 158 GDevtiADl~L~pqv~nA~rf~vdl~PYPti~ri~e~l~e-lpaFq~ahP 206 (217)
T KOG0868|consen 158 GDEVTIADLCLPPQVYNANRFHVDLTPYPTITRINEELAE-LPAFQAAHP 206 (217)
T ss_pred CceeehhhhccchhhhhhhhccccCCcCchHHHHHHHHHh-CHHHHhcCC
Confidence 9999999999999999887777779999999999999999 999998444
No 10
>TIGR01262 maiA maleylacetoacetate isomerase. Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism.
Probab=99.97 E-value=8.2e-30 Score=209.10 Aligned_cols=200 Identities=27% Similarity=0.294 Sum_probs=154.1
Q ss_pred EEEecCCCchhHHHHHHHHHhCCceeEEEecccc-cccchHHHHhhCCCccccEEeeCCeeeeecHHHHHHHHHhcCCCC
Q psy13748 4 ILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLA-REQFSDEYLKLNPQHTVPTLEDGDLIVWDSHAINAYLVSAYGKND 82 (296)
Q Consensus 4 ~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~-~~~~~~~~~~~~p~~~vP~l~~~~~~~~es~~I~~yl~~~~~~~~ 82 (296)
+||++..|++|++||++|.++||+|+.+.++... +++..++++++||.|+||+|++||.+++||.+|++||++++++.
T Consensus 1 ~Ly~~~~s~~~~~v~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~nP~g~vP~L~~~g~~l~ES~aI~~yl~~~~~~~- 79 (210)
T TIGR01262 1 KLYSYWRSSCSYRVRIALALKGIDYEYVPVNLLRDGEQRSPEFLALNPQGLVPTLDIDGEVLTQSLAIIEYLEETYPDP- 79 (210)
T ss_pred CcccCCCCCchHHHHHHHHHCCCCceEEecccccccccCChhhhhcCCCCcCCEEEECCEEeecHHHHHHHHHHhCCCC-
Confidence 5899999999999999999999999999998732 35567899999999999999999999999999999999999863
Q ss_pred CCCCCCHHHHHHHhhhhhccccchhhhhhhhccCcceEeeccCCCCCCccccccCCCCCccEEEeCCEEeeccHHHHHHH
Q psy13748 83 ALYPKDPKVRALVDQRLHFDSGVLFSALRNIGVSKTFCSDLYLGWIPINFSPQLNPQHTVPTLEDGDLIVWDSHAINAYL 162 (296)
Q Consensus 83 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~nP~~~vP~L~~~g~~l~es~aI~~yl 162 (296)
.++|.++.+++.+++|+.+..+.+.+... ..+..++
T Consensus 80 ~l~p~~~~~~a~~~~~~~~~~~~~~~~~~--------------------------------------------~~~~~~~ 115 (210)
T TIGR01262 80 PLLPADPIKRARVRALALLIACDIHPLNN--------------------------------------------LRVLQYL 115 (210)
T ss_pred CCCCCCHHHHHHHHHHHHHHhcccChhhh--------------------------------------------hhHHHHH
Confidence 68898999999999998876543321000 0000000
Q ss_pred HHHhCCCCCCCCCCHHHHHHHHhHHhhccchhhhHHHHhhhhhhccCCcCCcHHHHHHHHHHHHHHHHHcCC--CCCcCC
Q psy13748 163 VSAYGKNDALYPKDPKVRALVDQRLHFDSGVLFSALRNIGLKIFFKNEKEIPEEDKLRAREALDFAEKFLQG--RKFITG 240 (296)
Q Consensus 163 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~--~~~l~g 240 (296)
.+..+ .......+...+.+.+.++.+|++|++ ++||+|
T Consensus 116 ~~~~~----------------------------------------~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G 155 (210)
T TIGR01262 116 REKLG----------------------------------------VEEEARNRWYQHWISKGFAALEALLQPHAGAFCVG 155 (210)
T ss_pred HhhcC----------------------------------------CCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEeeC
Confidence 00000 000001122345688899999999986 469999
Q ss_pred CcccchhHhHHHHHHHHHhhCCCCCCchhHHHHHHHHhccccCcccCCC
Q psy13748 241 DTYNIADFSIYTTASALVALVPGLEKYPNLAKYFDLCKSSFKGISHDEE 289 (296)
Q Consensus 241 ~~~t~aD~~~~~~l~~~~~~~~~~~~~p~l~~~~~~~~~~~p~~~~~~~ 289 (296)
+++|+||+.+++.+.+....+..+..||+|.+|+++|.+ +|+++++.+
T Consensus 156 ~~~T~ADi~~~~~l~~~~~~~~~~~~~p~l~~~~~~~~~-rp~~~~~~~ 203 (210)
T TIGR01262 156 DTPTLADLCLVPQVYNAERFGVDLTPYPTLRRIAAALAA-LPAFQRAHP 203 (210)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCcccchHHHHHHHHHhc-CHHHHHhCc
Confidence 999999999999998776555556889999999999999 999999443
No 11
>COG0625 Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=4.3e-29 Score=204.87 Aligned_cols=192 Identities=29% Similarity=0.385 Sum_probs=156.0
Q ss_pred cEEEecCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEeeCCe-eeeecHHHHHHHHHhcCCC
Q psy13748 3 LILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDGDL-IVWDSHAINAYLVSAYGKN 81 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~-~~~es~~I~~yl~~~~~~~ 81 (296)
++||+.+.||+|+||+++|.++|++|+.+.+++.. +..+++|+++||.|+||+|++++. +|+||.+|++||+++++..
T Consensus 1 ~~L~~~~~sp~~~kv~l~l~e~g~~ye~~~v~~~~-~~~~~~~~~~nP~gkVPvL~~~~~~~l~ES~AI~~YL~~~~~~~ 79 (211)
T COG0625 1 MKLYGSPTSPYSRKVRLALEEKGLPYEIVLVDLDA-EQKPPDFLALNPLGKVPALVDDDGEVLTESGAILEYLAERYPGP 79 (211)
T ss_pred CeeecCCCCcchHHHHHHHHHcCCCceEEEeCccc-ccCCHHHHhcCCCCCCCEEeeCCCCeeecHHHHHHHHHhhCCCC
Confidence 58999999999999999999999999999999987 778899999999999999997665 8999999999999999964
Q ss_pred CCCCCCCHH---HHHHHhhhhhccccchhhhhhhhccCcceEeeccCCCCCCccccccCCCCCccEEEeCCEEeeccHHH
Q psy13748 82 DALYPKDPK---VRALVDQRLHFDSGVLFSALRNIGVSKTFCSDLYLGWIPINFSPQLNPQHTVPTLEDGDLIVWDSHAI 158 (296)
Q Consensus 82 ~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~nP~~~vP~L~~~g~~l~es~aI 158 (296)
. ++|.++. +|+.+..|+.+..+.+.+......
T Consensus 80 ~-l~p~~~~~r~~r~~~~~~~~~~~~~~~~~~~~~~-------------------------------------------- 114 (211)
T COG0625 80 P-LLPADPLARRARALLLWWLFFAASDLHPVIGQRR-------------------------------------------- 114 (211)
T ss_pred C-cCCCCchhHHHHHHHHHHHHHHHhcccHHHHHHH--------------------------------------------
Confidence 3 8998774 777777887777655443222111
Q ss_pred HHHHHHHhCCCCCCCCCCHHHHHHHHhHHhhccchhhhHHHHhhhhhhcc--C-CcCCcHHHHHHHHHHHHHHHHHcCCC
Q psy13748 159 NAYLVSAYGKNDALYPKDPKVRALVDQRLHFDSGVLFSALRNIGLKIFFK--N-EKEIPEEDKLRAREALDFAEKFLQGR 235 (296)
Q Consensus 159 ~~yl~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~l~~le~~L~~~ 235 (296)
...... . .....+...+.+...+..++..|.++
T Consensus 115 --------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~ 150 (211)
T COG0625 115 --------------------------------------------RALLGSEPELLEAALEAARAEIRALLALLEALLADG 150 (211)
T ss_pred --------------------------------------------hhhccccccccHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 000000 0 11123455677889999999999999
Q ss_pred CCcCCCcccchhHhHHHHHHHHHhhCCCCCCchhHHHHHHHHhccccCcc
Q psy13748 236 KFITGDTYNIADFSIYTTASALVALVPGLEKYPNLAKYFDLCKSSFKGIS 285 (296)
Q Consensus 236 ~~l~g~~~t~aD~~~~~~l~~~~~~~~~~~~~p~l~~~~~~~~~~~p~~~ 285 (296)
+|++|+++|+||+.+++.+.++...+.....+|++.+|++|+.+ +|+++
T Consensus 151 ~~l~G~~~tiAD~~~~~~~~~~~~~~~~~~~~p~l~~w~~r~~~-rp~~~ 199 (211)
T COG0625 151 PYLAGDRFTIADIALAPLLWRLALLGEELADYPALKAWYERVLA-RPAFR 199 (211)
T ss_pred CcccCCCCCHHHHHHHHHHHHhhhcCcccccChHHHHHHHHHHc-CCchh
Confidence 99999999999999999999877776666889999999999998 99953
No 12
>PRK11752 putative S-transferase; Provisional
Probab=99.96 E-value=1.2e-28 Score=208.11 Aligned_cols=194 Identities=25% Similarity=0.339 Sum_probs=149.1
Q ss_pred ccEEEecCCCchhHHHHHHHHHh------CCceeEEEecccccccchHHHHhhCCCccccEEeeC----CeeeeecHHHH
Q psy13748 2 GLILHEIIASPPVRAVKLCLTEL------GLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDG----DLIVWDSHAIN 71 (296)
Q Consensus 2 ~~~Ly~~~~s~~~~~v~~~L~~~------gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~----~~~~~es~~I~ 71 (296)
+++||+.+ |++|+||+++|+++ |++|+.+.+++..+++.+++|+++||.|+||+|+++ +.+|+||.+|+
T Consensus 44 ~~~Ly~~~-s~~~~rV~i~L~e~~~~~~~gl~ye~~~v~~~~~~~~~~e~~~iNP~GkVP~Lv~~dg~~~~~L~ES~AIl 122 (264)
T PRK11752 44 PLQLYSLG-TPNGQKVTIMLEELLALGVKGAEYDAWLIRIGEGDQFSSGFVEINPNSKIPALLDRSGNPPIRVFESGAIL 122 (264)
T ss_pred CeEEecCC-CCchHHHHHHHHHHHhccCCCCceEEEEecCccccccCHHHHhhCCCCCCCEEEeCCCCCCeEEEcHHHHH
Confidence 58999975 99999999999997 999999999998877888999999999999999964 36899999999
Q ss_pred HHHHHhcCCCCCCCCCCHHHHHHHhhhhhccccchhhhhhhhccCcceEeeccCCCCCCccccccCCCCCccEEEeCCEE
Q psy13748 72 AYLVSAYGKNDALYPKDPKVRALVDQRLHFDSGVLFSALRNIGVSKTFCSDLYLGWIPINFSPQLNPQHTVPTLEDGDLI 151 (296)
Q Consensus 72 ~yl~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~nP~~~vP~L~~~g~~ 151 (296)
+||+++++ .|+|.++.+|+.++.|+.+..+.+.. ..
T Consensus 123 ~YL~~~~~---~L~P~~~~era~v~~wl~~~~~~~~~-~~---------------------------------------- 158 (264)
T PRK11752 123 LYLAEKFG---AFLPKDLAARTETLNWLFWQQGSAPF-LG---------------------------------------- 158 (264)
T ss_pred HHHHHhcC---CcCCCCHHHHHHHHHHHHHHhhhhhH-HH----------------------------------------
Confidence 99999987 48999999999999998766543210 00
Q ss_pred eeccHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhHHhhccchhhhHHHHhhhhhhccCCcCCcHHHHHHHHHHHHHHHHH
Q psy13748 152 VWDSHAINAYLVSAYGKNDALYPKDPKVRALVDQRLHFDSGVLFSALRNIGLKIFFKNEKEIPEEDKLRAREALDFAEKF 231 (296)
Q Consensus 152 l~es~aI~~yl~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~ 231 (296)
.. . ...+ ...........+...+.+.+.++.+|++
T Consensus 159 ----------------------------~~-~---------------~~~~-~~~~~~~~~~~~~~~~~~~~~L~~le~~ 193 (264)
T PRK11752 159 ----------------------------GG-F---------------GHFY-AYAPEKIEYAINRFTMEAKRQLDVLDKQ 193 (264)
T ss_pred ----------------------------HH-H---------------HHHH-HhCCccchHHHHHHHHHHHHHHHHHHHH
Confidence 00 0 0000 0000000111233345678889999999
Q ss_pred cCCCCCcCCCcccchhHhHHHHHHHHHhh------C-CCCCCchhHHHHHHHHhccccCccc
Q psy13748 232 LQGRKFITGDTYNIADFSIYTTASALVAL------V-PGLEKYPNLAKYFDLCKSSFKGISH 286 (296)
Q Consensus 232 L~~~~~l~g~~~t~aD~~~~~~l~~~~~~------~-~~~~~~p~l~~~~~~~~~~~p~~~~ 286 (296)
|++++||+|+++|+||+++++.+.++... . ..+..||++.+|++++.+ +|++++
T Consensus 194 L~~~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~~~~~~P~L~~w~~rv~~-rPs~k~ 254 (264)
T PRK11752 194 LAEHEYIAGDEYTIADIAIWPWYGNLVLGNLYDAAEFLDVGSYKHVQRWAKEIAE-RPAVKR 254 (264)
T ss_pred hccCCCCCCCccCHHHHHHHHHHHHHhhccccccccccCcccCHHHHHHHHHHHh-CHHHHH
Confidence 99889999999999999999887655331 1 125789999999999999 999998
No 13
>PRK10357 putative glutathione S-transferase; Provisional
Probab=99.96 E-value=1.7e-27 Score=194.17 Aligned_cols=196 Identities=22% Similarity=0.245 Sum_probs=147.7
Q ss_pred cEEEecCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEe-eCCeeeeecHHHHHHHHHhcCCC
Q psy13748 3 LILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLE-DGDLIVWDSHAINAYLVSAYGKN 81 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~-~~~~~~~es~~I~~yl~~~~~~~ 81 (296)
++||+++.||++++|+++|+++||+|+.+.++...+ ++++.++||.|+||+|+ +||.+++||.+|++||+++++.
T Consensus 1 ~~Ly~~~~s~~~~~v~~~L~~~gv~ye~~~~~~~~~---~~~~~~~nP~g~vP~L~~~~g~~l~eS~aI~~yL~~~~~~- 76 (202)
T PRK10357 1 MKLIGSYTSPFVRKISILLLEKGITFEFVNELPYNA---DNGVAQYNPLGKVPALVTEEGECWFDSPIIAEYIELLNVA- 76 (202)
T ss_pred CeeecCCCCchHHHHHHHHHHcCCCCeEEecCCCCC---chhhhhcCCccCCCeEEeCCCCeeecHHHHHHHHHHhCCC-
Confidence 589999999999999999999999999998886543 45777889999999998 7889999999999999999875
Q ss_pred CCCCCCCHHHHHHHhhhhhccccchhhhhhhhccCcceEeeccCCCCCCccccccCCCCCccEEEeCCEEeeccHHHHHH
Q psy13748 82 DALYPKDPKVRALVDQRLHFDSGVLFSALRNIGVSKTFCSDLYLGWIPINFSPQLNPQHTVPTLEDGDLIVWDSHAINAY 161 (296)
Q Consensus 82 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~nP~~~vP~L~~~g~~l~es~aI~~y 161 (296)
+.|+|.++.+++.+++|..+..+.+......
T Consensus 77 ~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~------------------------------------------------- 107 (202)
T PRK10357 77 PAMLPRDPLAALRVRQLEALADGIMDAALVS------------------------------------------------- 107 (202)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH-------------------------------------------------
Confidence 3688988888888888876544422111000
Q ss_pred HHHHhCCCCCCCCCCHHHHHHHHhHHhhccchhhhHHHHhhhhhhccCCcCCcHHHHHHHHHHHHHHHHHcCCCCCcCCC
Q psy13748 162 LVSAYGKNDALYPKDPKVRALVDQRLHFDSGVLFSALRNIGLKIFFKNEKEIPEEDKLRAREALDFAEKFLQGRKFITGD 241 (296)
Q Consensus 162 l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~g~ 241 (296)
+ ...... .........+...+.+.+.++.+|++|.+++ ++|+
T Consensus 108 ---------------------~---------------~~~~~~-~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~-l~Gd 149 (202)
T PRK10357 108 ---------------------V---------------REQARP-AAQQSEDELLRQREKINRSLDALEGYLVDGT-LKTD 149 (202)
T ss_pred ---------------------H---------------HHHhCc-cccccHHHHHHHHHHHHHHHHHHHHhhccCc-ccCC
Confidence 0 000000 0000011123445678889999999998777 9999
Q ss_pred cccchhHhHHHHHHHHHhhCC--C-CCCchhHHHHHHHHhccccCcccCCCC
Q psy13748 242 TYNIADFSIYTTASALVALVP--G-LEKYPNLAKYFDLCKSSFKGISHDEEG 290 (296)
Q Consensus 242 ~~t~aD~~~~~~l~~~~~~~~--~-~~~~p~l~~~~~~~~~~~p~~~~~~~~ 290 (296)
++|+||+.+++.+.++..... . ...+|++.+|++++.+ +|+|+++.+.
T Consensus 150 ~~t~ADi~l~~~l~~~~~~~~~~~~~~~~p~l~~~~~~i~~-rp~~~~~~~~ 200 (202)
T PRK10357 150 TVNLATIAIACAVGYLNFRRVAPGWCVDRPHLVKLVENLFQ-RESFARTEPP 200 (202)
T ss_pred CcCHHHHHHHHHHHHHHhcccCcchhhcChHHHHHHHHHhc-ChhhhhcCCC
Confidence 999999999999876644222 2 4679999999999999 9999996553
No 14
>TIGR00862 O-ClC intracellular chloride channel protein. These proteins are thought to function in the regulation of the membrane potential and in transepithelial ion absorption and secretion in the kidney.
Probab=99.95 E-value=1.7e-26 Score=189.80 Aligned_cols=179 Identities=17% Similarity=0.209 Sum_probs=134.6
Q ss_pred cCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEeeCCeeeeecHHHHHHHHHhcCCC--CCCC
Q psy13748 8 IIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDGDLIVWDSHAINAYLVSAYGKN--DALY 85 (296)
Q Consensus 8 ~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~~es~~I~~yl~~~~~~~--~~l~ 85 (296)
...||+|++|+++|.++|++|+.+.+++.+ .+++|+++||.|+||+|+++|.+++||.+|++||+++++++ +.+.
T Consensus 16 ~~~cp~~~rv~i~L~ekgi~~e~~~vd~~~---~~~~fl~inP~g~vPvL~~~g~~l~ES~aI~eYL~e~~~~~~~p~l~ 92 (236)
T TIGR00862 16 IGNCPFSQRLFMILWLKGVVFNVTTVDLKR---KPEDLQNLAPGTHPPFLTYNTEVKTDVNKIEEFLEETLCPPRYPKLS 92 (236)
T ss_pred CCCCHhHHHHHHHHHHcCCCcEEEEECCCC---CCHHHHHHCcCCCCCEEEECCEEeecHHHHHHHHHHHcCCCCCCCCC
Confidence 357999999999999999999999999864 37899999999999999999999999999999999999753 2344
Q ss_pred CCCHHHHHHHhhhhhccccchhhhhhhhccCcceEeeccCCCCCCccccccCCCCCccEEEeCCEEeeccHHHHHHHHHH
Q psy13748 86 PKDPKVRALVDQRLHFDSGVLFSALRNIGVSKTFCSDLYLGWIPINFSPQLNPQHTVPTLEDGDLIVWDSHAINAYLVSA 165 (296)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~nP~~~vP~L~~~g~~l~es~aI~~yl~~~ 165 (296)
|.++..++....
T Consensus 93 p~~~~~~~~~~~-------------------------------------------------------------------- 104 (236)
T TIGR00862 93 PKHPESNTAGLD-------------------------------------------------------------------- 104 (236)
T ss_pred CCCHHHHHHHHH--------------------------------------------------------------------
Confidence 433333222110
Q ss_pred hCCCCCCCCCCHHHHHHHHhHHhhccchhhhHHHHhhhhhhccCCcCCcHHHHHHHHHHHHHHHHHcC------------
Q psy13748 166 YGKNDALYPKDPKVRALVDQRLHFDSGVLFSALRNIGLKIFFKNEKEIPEEDKLRAREALDFAEKFLQ------------ 233 (296)
Q Consensus 166 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~------------ 233 (296)
+...+..++ ........+...+.+.+.++.++++|.
T Consensus 105 ----------------------------l~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~Le~~L~~~~~~~~~~~~~ 152 (236)
T TIGR00862 105 ----------------------------IFAKFSAYI----KNSNPEANDNLEKGLLKALKKLDDYLNSPLPEEIDEDSA 152 (236)
T ss_pred ----------------------------HHHHHHHHH----HcCCHHHHHHHHHHHHHHHHHHHHHHhcccccccccccc
Confidence 000000000 011111112333457888888888886
Q ss_pred ------CCCCcCCCcccchhHhHHHHHHHHHhh-----CCC-CCCchhHHHHHHHHhccccCcccCCCC
Q psy13748 234 ------GRKFITGDTYNIADFSIYTTASALVAL-----VPG-LEKYPNLAKYFDLCKSSFKGISHDEEG 290 (296)
Q Consensus 234 ------~~~~l~g~~~t~aD~~~~~~l~~~~~~-----~~~-~~~~p~l~~~~~~~~~~~p~~~~~~~~ 290 (296)
+++|+.|+.+|++|+.+++.+.++..+ +++ .+.||+|.+|++++.+ +++|+++.+.
T Consensus 153 ~~~~~~~~~f~~Gd~~tlaD~~l~p~l~~l~~~~~~~~~~~i~~~~p~l~~w~~~~~~-~~sf~~t~p~ 220 (236)
T TIGR00862 153 EDEKVSRRKFLDGDELTLADCNLLPKLHIVKVVAKKYRNFDIPAEFTGVWRYLSNAYA-REEFTNTCPD 220 (236)
T ss_pred ccccccCCCcccCCccchhhHHHHHHHHHHHHHHHHHhCcCccccCchHHHHHHHHhc-cchHHhhCCC
Confidence 479999999999999999999888754 666 6899999999999999 9999985443
No 15
>PLN02378 glutathione S-transferase DHAR1
Probab=99.94 E-value=1.9e-25 Score=183.28 Aligned_cols=173 Identities=22% Similarity=0.252 Sum_probs=130.4
Q ss_pred ecCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEeeCCeeeeecHHHHHHHHHhcCCCCCCCC
Q psy13748 7 EIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDGDLIVWDSHAINAYLVSAYGKNDALYP 86 (296)
Q Consensus 7 ~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~~es~~I~~yl~~~~~~~~~l~~ 86 (296)
++..||+|+||+++|+++|++|+.+.+++.. .+++|+++||.|+||+|++||.+|+||.+|++||+++++.. .+
T Consensus 16 ~~~~~p~~~rv~~~L~e~gl~~e~~~v~~~~---~~~~~l~inP~G~VPvL~~~~~~l~ES~aI~~YL~~~~~~~-~l-- 89 (213)
T PLN02378 16 HLGDCPFSQRALLTLEEKSLTYKIHLINLSD---KPQWFLDISPQGKVPVLKIDDKWVTDSDVIVGILEEKYPDP-PL-- 89 (213)
T ss_pred CCCCCcchHHHHHHHHHcCCCCeEEEeCccc---CCHHHHHhCCCCCCCEEEECCEEecCHHHHHHHHHHhCCCC-CC--
Confidence 3567999999999999999999999999854 36799999999999999999999999999999999999853 23
Q ss_pred CCHHHHHHHhhhhhccccchhhhhhhhccCcceEeeccCCCCCCccccccCCCCCccEEEeCCEEeeccHHHHHHHHHHh
Q psy13748 87 KDPKVRALVDQRLHFDSGVLFSALRNIGVSKTFCSDLYLGWIPINFSPQLNPQHTVPTLEDGDLIVWDSHAINAYLVSAY 166 (296)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~nP~~~vP~L~~~g~~l~es~aI~~yl~~~~ 166 (296)
.++.+++.+...+.
T Consensus 90 ~~~~~~a~i~~~~~------------------------------------------------------------------ 103 (213)
T PLN02378 90 KTPAEFASVGSNIF------------------------------------------------------------------ 103 (213)
T ss_pred CCHHHHHHHHHHHH------------------------------------------------------------------
Confidence 24455554332110
Q ss_pred CCCCCCCCCCHHHHHHHHhHHhhccchhhhHHHHhhhhhhccCCcCCcHHHHHHHHHHHHHHHHHcC--CCCCcCCCccc
Q psy13748 167 GKNDALYPKDPKVRALVDQRLHFDSGVLFSALRNIGLKIFFKNEKEIPEEDKLRAREALDFAEKFLQ--GRKFITGDTYN 244 (296)
Q Consensus 167 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~--~~~~l~g~~~t 244 (296)
..+..... .. . ..+...+.+.+.+..+|++|+ +++|++|+++|
T Consensus 104 -----------------------------~~~~~~~~----~~-~-~~~~~~~~~~~~l~~le~~L~~~~~~fl~Gd~~T 148 (213)
T PLN02378 104 -----------------------------GTFGTFLK----SK-D-SNDGSEHALLVELEALENHLKSHDGPFIAGERVS 148 (213)
T ss_pred -----------------------------HHHHHHHh----cC-C-hhhHHHHHHHHHHHHHHHHHhcCCCCCcCCCCCc
Confidence 00000000 00 0 012333567778999999997 46899999999
Q ss_pred chhHhHHHHHHHHHhh-----CCC-CCCchhHHHHHHHHhccccCcccC
Q psy13748 245 IADFSIYTTASALVAL-----VPG-LEKYPNLAKYFDLCKSSFKGISHD 287 (296)
Q Consensus 245 ~aD~~~~~~l~~~~~~-----~~~-~~~~p~l~~~~~~~~~~~p~~~~~ 287 (296)
+||+.+++.+.++... ++. ...+|++.+|++++.+ +|++++.
T Consensus 149 ~ADi~l~~~~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~-rpa~~~~ 196 (213)
T PLN02378 149 AVDLSLAPKLYHLQVALGHFKSWSVPESFPHVHNYMKTLFS-LDSFEKT 196 (213)
T ss_pred hhhHHHHHHHHHHHHHHHHhcCCCchhHhHHHHHHHHHHhc-CCCeecc
Confidence 9999999998765432 222 3679999999999999 9999983
No 16
>KOG4420|consensus
Probab=99.94 E-value=4.1e-26 Score=181.23 Aligned_cols=248 Identities=21% Similarity=0.219 Sum_probs=162.7
Q ss_pred cEEEecCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEeeCCeeeeecHHHHHHHHHhcCCCC
Q psy13748 3 LILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDGDLIVWDSHAINAYLVSAYGKND 82 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~~es~~I~~yl~~~~~~~~ 82 (296)
+.||+++.|-.++|||+++++|||.|+...|++..+++.++||.++||.|+||||++|+.+|.|++.|++|++++|-...
T Consensus 27 ~vLyhhpysf~sQkVrlvi~EK~id~~~y~V~l~~geh~epwFmrlNp~gevPVl~~g~~II~d~tqIIdYvErtf~ger 106 (325)
T KOG4420|consen 27 LVLYHHPYSFSSQKVRLVIAEKGIDCEEYDVSLPQGEHKEPWFMRLNPGGEVPVLIHGDNIISDYTQIIDYVERTFTGER 106 (325)
T ss_pred ceeeecCcccccceeeeehhhcccccceeeccCccccccCchheecCCCCCCceEecCCeecccHHHHHHHHHHhhcccc
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999998777
Q ss_pred CCCCC-CHHHHHHHhhhhhccccchhhhhhhhccCcceEeeccCCCCCCccccccCCCCCccEEEeCCEEeeccHHHHHH
Q psy13748 83 ALYPK-DPKVRALVDQRLHFDSGVLFSALRNIGVSKTFCSDLYLGWIPINFSPQLNPQHTVPTLEDGDLIVWDSHAINAY 161 (296)
Q Consensus 83 ~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~nP~~~vP~L~~~g~~l~es~aI~~y 161 (296)
.|.|. +..+.+++..+.......-..++..- +-++|.-++ ...+..-..|.+|
T Consensus 107 ~l~pe~~S~~~d~~l~~e~~l~~lpm~~~t~g--------------------~~lh~eL~~------~s~iP~~~~iR~~ 160 (325)
T KOG4420|consen 107 VLMPEVGSLQHDRVLQYEELLDALPMDAYTHG--------------------CILHPELTT------DSMIPKYAEIRRH 160 (325)
T ss_pred cccccccccccHHHHHHHHHHHhcCcchhhcc--------------------ccccchhhc------cccCcccHHHHHH
Confidence 78886 33333333333322222111111000 001110000 0001111345555
Q ss_pred HHHHhCC-CCCCCCCCHHHHHHHHhHHhhccchhhhHHHHhhhhhhccCCcCCcHHHHHHHHHHHHHHHHHcCC----CC
Q psy13748 162 LVSAYGK-NDALYPKDPKVRALVDQRLHFDSGVLFSALRNIGLKIFFKNEKEIPEEDKLRAREALDFAEKFLQG----RK 236 (296)
Q Consensus 162 l~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~----~~ 236 (296)
+...... .....-..+.... ...................+...+....+...|+.+|+-|++ ..
T Consensus 161 ~~k~~~~v~~l~~~e~pdla~-----------ay~akqkkl~~kl~~hdd~s~lkkild~l~~~Ld~VEteLe~r~~~~~ 229 (325)
T KOG4420|consen 161 LAKATTDVMKLDHEEEPDLAE-----------AYLAKQKKLMAKLLEHDDVSYLKKILDELAMVLDQVETELEKRKLCEL 229 (325)
T ss_pred HHHHHHHHHHHHhhcCchhhH-----------HHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhhccccce
Confidence 5443221 0000000000000 000000000111111111223345566778888888888886 58
Q ss_pred CcCCCcccchhHhHHHHHHHHHhhCCC-----CCCchhHHHHHHHHhccccCcccCC
Q psy13748 237 FITGDTYNIADFSIYTTASALVALVPG-----LEKYPNLAKYFDLCKSSFKGISHDE 288 (296)
Q Consensus 237 ~l~g~~~t~aD~~~~~~l~~~~~~~~~-----~~~~p~l~~~~~~~~~~~p~~~~~~ 288 (296)
||+|+.+|+||+.+.+.|+++..+|+. ....|+|..|++|+.+ |++|++..
T Consensus 230 wL~G~efslADVsLg~~LhRL~~Lg~e~~yw~~gsrpnle~Yf~rvrr-R~sf~kvl 285 (325)
T KOG4420|consen 230 WLCGCEFSLADVSLGATLHRLKFLGLEKKYWEDGSRPNLESYFERVRR-RFSFRKVL 285 (325)
T ss_pred eeccccchHHHHHHHHHHHHHHHcccHHHhcccCCCccHHHHHHHHHh-hhHHHHhh
Confidence 999999999999999999999999875 4477999999999999 99999843
No 17
>PTZ00057 glutathione s-transferase; Provisional
Probab=99.93 E-value=3.1e-25 Score=180.99 Aligned_cols=180 Identities=18% Similarity=0.223 Sum_probs=127.3
Q ss_pred cEEEecCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHH--------hhCCCccccEEeeCCeeeeecHHHHHHH
Q psy13748 3 LILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYL--------KLNPQHTVPTLEDGDLIVWDSHAINAYL 74 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~--------~~~p~~~vP~l~~~~~~~~es~~I~~yl 74 (296)
++||+++.++++++||++|+++|++|+.+.++. ..+ .++ +.||.|+||+|++||.+|+||.||++||
T Consensus 5 ~~L~y~~~~~~~~~vrl~L~~~gi~ye~~~~~~----~~~-~~~~~~~~~~~~~nP~g~vP~L~~~~~~l~eS~AI~~YL 79 (205)
T PTZ00057 5 IVLYYFDARGKAELIRLIFAYLGIEYTDKRFGE----NGD-AFIEFKNFKKEKDTPFEQVPILEMDNIIFAQSQAIVRYL 79 (205)
T ss_pred eEEEecCCCcchHHHHHHHHHcCCCeEEEeccc----cch-HHHHHHhccccCCCCCCCCCEEEECCEEEecHHHHHHHH
Confidence 899999999999999999999999999987742 212 332 4799999999999999999999999999
Q ss_pred HHhcCCCCCCCCCCHHHHHHHhhhhhccccchhhhhhhhccCcceEeeccCCCCCCccccccCCCCCccEEEeCCEEeec
Q psy13748 75 VSAYGKNDALYPKDPKVRALVDQRLHFDSGVLFSALRNIGVSKTFCSDLYLGWIPINFSPQLNPQHTVPTLEDGDLIVWD 154 (296)
Q Consensus 75 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~nP~~~vP~L~~~g~~l~e 154 (296)
+++++. .+.+..+++.++.......+ +...
T Consensus 80 a~~~~~----~~~~~~~~~~~~~~~~~~~~-~~~~--------------------------------------------- 109 (205)
T PTZ00057 80 SKKYKI----CGESELNEFYADMIFCGVQD-IHYK--------------------------------------------- 109 (205)
T ss_pred HHHcCC----CCCCHHHHHHHHHHHHHHHH-HHHH---------------------------------------------
Confidence 999863 23333333333221110000 0000
Q ss_pred cHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhHHhhccchhhhHHHHhhhhhhccCCcCCcHHHHHHHHHHHHHHHHHcCC
Q psy13748 155 SHAINAYLVSAYGKNDALYPKDPKVRALVDQRLHFDSGVLFSALRNIGLKIFFKNEKEIPEEDKLRAREALDFAEKFLQG 234 (296)
Q Consensus 155 s~aI~~yl~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~ 234 (296)
+... ..+. ....+...+.+.+.+..+|++|++
T Consensus 110 ----------------------------~~~~-------------~~~~-------~~~~~~~~~~~~~~l~~le~~L~~ 141 (205)
T PTZ00057 110 ----------------------------FNNT-------------NLFK-------QNETTFLNEELPKWSGYFENILKK 141 (205)
T ss_pred ----------------------------Hhhh-------------HHHH-------HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0000 0000 000123346788888999999975
Q ss_pred C--CCcCCCcccchhHhHHHHHHHHHh-hCCCCCCchhHHHHHHHHhccccCccc
Q psy13748 235 R--KFITGDTYNIADFSIYTTASALVA-LVPGLEKYPNLAKYFDLCKSSFKGISH 286 (296)
Q Consensus 235 ~--~~l~g~~~t~aD~~~~~~l~~~~~-~~~~~~~~p~l~~~~~~~~~~~p~~~~ 286 (296)
+ +|++|+++|+||+.+++.+.++.. .+..+..||+|.+|.+++++ +|++++
T Consensus 142 ~~~~~l~Gd~~T~AD~~l~~~~~~~~~~~~~~l~~~P~l~~~~~r~~~-~P~~k~ 195 (205)
T PTZ00057 142 NHCNYFVGDNLTYADLAVFNLYDDIETKYPNSLKNFPLLKAHNEFISN-LPNIKN 195 (205)
T ss_pred CCCCeeeCCcccHHHHHHHHHHHHHHHhChhhhccChhHHHHHHHHHh-ChHHHH
Confidence 3 799999999999999998876653 34457899999999999999 999998
No 18
>PRK10387 glutaredoxin 2; Provisional
Probab=99.93 E-value=1.8e-25 Score=183.27 Aligned_cols=205 Identities=16% Similarity=0.114 Sum_probs=139.5
Q ss_pred cEEEecCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEE-eeCCeeeeecHHHHHHHHHhcCCC
Q psy13748 3 LILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTL-EDGDLIVWDSHAINAYLVSAYGKN 81 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l-~~~~~~~~es~~I~~yl~~~~~~~ 81 (296)
++||++..||+|+||+++|+++||+|+.+.++... ... ..+.||.|+||+| .+||.+++||.+|++||+++|++.
T Consensus 1 ~~Ly~~~~sp~~~kv~~~L~~~gi~y~~~~~~~~~--~~~--~~~~~p~~~VPvL~~~~g~~l~eS~aI~~yL~~~~~~~ 76 (210)
T PRK10387 1 MKLYIYDHCPFCVKARMIFGLKNIPVELIVLANDD--EAT--PIRMIGQKQVPILQKDDGSYMPESLDIVHYIDELDGKP 76 (210)
T ss_pred CEEEeCCCCchHHHHHHHHHHcCCCeEEEEcCCCc--hhh--HHHhcCCcccceEEecCCeEecCHHHHHHHHHHhCCCc
Confidence 68999999999999999999999999998876432 222 2678999999999 588999999999999999999853
Q ss_pred CCCCCCCHHHHHHHhhhhhccccchhhhhhhhccCcceEeeccCCCCCCccccccCCCCCccEEEeCCEEeeccHHHHHH
Q psy13748 82 DALYPKDPKVRALVDQRLHFDSGVLFSALRNIGVSKTFCSDLYLGWIPINFSPQLNPQHTVPTLEDGDLIVWDSHAINAY 161 (296)
Q Consensus 82 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~nP~~~vP~L~~~g~~l~es~aI~~y 161 (296)
+++ ..+++.++.|+.+....+...+...
T Consensus 77 --~l~--~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------------------ 104 (210)
T PRK10387 77 --LLT--GKRSPAIEEWLRKVFGYLNKLLYPR------------------------------------------------ 104 (210)
T ss_pred --cCC--CcccHHHHHHHHHHHHHhhcchhcc------------------------------------------------
Confidence 343 2357778888876654332211000
Q ss_pred HHHHhCCCCCCCC--CCHHHHHHHHhHHhhccchhhhHHHHhhhhhhccCCcCCcHHHHHHHHHHHHHHHHHcCCCCCcC
Q psy13748 162 LVSAYGKNDALYP--KDPKVRALVDQRLHFDSGVLFSALRNIGLKIFFKNEKEIPEEDKLRAREALDFAEKFLQGRKFIT 239 (296)
Q Consensus 162 l~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~ 239 (296)
+. ....| .....+.....-.....+... . .....+...+.+++.+..++++|++ +|++
T Consensus 105 ----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~-----~~~~~~~~~~~~~~~l~~le~~L~~-~~l~ 164 (210)
T PRK10387 105 ----FA--KADLPEFATPSARQYFIDKKEASIGDFD--------A-----LLAHTPGLIKEINADLRALDPLIVK-PNAV 164 (210)
T ss_pred ----cc--cCCCcccCCHHHHHHHHHhHHhccCCHH--------H-----HHhcCHHHHHHHHHHHHHHHHHhcC-cccc
Confidence 00 00000 111111110000000000000 0 0011245667899999999999987 9999
Q ss_pred CCcccchhHhHHHHHHHHHhhCCCCCCchhHHHHHHHHhccccCcc
Q psy13748 240 GDTYNIADFSIYTTASALVALVPGLEKYPNLAKYFDLCKSSFKGIS 285 (296)
Q Consensus 240 g~~~t~aD~~~~~~l~~~~~~~~~~~~~p~l~~~~~~~~~~~p~~~ 285 (296)
|+++|+||+.+++.+.++...+. ...+|++.+|++|+.+ +|++.
T Consensus 165 G~~~s~ADi~l~~~l~~~~~~~~-~~~~p~l~~w~~r~~~-r~~~~ 208 (210)
T PRK10387 165 NGELSTDDIHLFPILRNLTLVKG-IEWPPRVADYRDNMSK-KTQVP 208 (210)
T ss_pred CCCCCHHHHHHHHHHhcceeecC-CCCCHHHHHHHHHHHH-HhCCC
Confidence 99999999999999988766422 2346999999999999 98864
No 19
>PLN02817 glutathione dehydrogenase (ascorbate)
Probab=99.92 E-value=2.7e-24 Score=180.58 Aligned_cols=173 Identities=20% Similarity=0.254 Sum_probs=131.2
Q ss_pred cCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEeeCCeeeeecHHHHHHHHHhcCCCCCCCCC
Q psy13748 8 IIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDGDLIVWDSHAINAYLVSAYGKNDALYPK 87 (296)
Q Consensus 8 ~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~~es~~I~~yl~~~~~~~~~l~~~ 87 (296)
...||+|++++++|+++||+|+.+.+++. ..+++|+++||.|+||+|+++|.+|+||.+|++||+++++.. .+.
T Consensus 70 ~g~cp~s~rV~i~L~ekgi~ye~~~vdl~---~~~~~fl~iNP~GkVPvL~~d~~~L~ES~aI~~YL~e~~p~~-~L~-- 143 (265)
T PLN02817 70 LGDCPFCQRVLLTLEEKHLPYDMKLVDLT---NKPEWFLKISPEGKVPVVKLDEKWVADSDVITQALEEKYPDP-PLA-- 143 (265)
T ss_pred CCCCcHHHHHHHHHHHcCCCCEEEEeCcC---cCCHHHHhhCCCCCCCEEEECCEEEecHHHHHHHHHHHCCCC-CCC--
Confidence 34599999999999999999999999884 347899999999999999988899999999999999999863 332
Q ss_pred CHHHHHHHhhhhhccccchhhhhhhhccCcceEeeccCCCCCCccccccCCCCCccEEEeCCEEeeccHHHHHHHHHHhC
Q psy13748 88 DPKVRALVDQRLHFDSGVLFSALRNIGVSKTFCSDLYLGWIPINFSPQLNPQHTVPTLEDGDLIVWDSHAINAYLVSAYG 167 (296)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~nP~~~vP~L~~~g~~l~es~aI~~yl~~~~~ 167 (296)
++.+++.+..++..
T Consensus 144 ~~~era~i~~~l~~------------------------------------------------------------------ 157 (265)
T PLN02817 144 TPPEKASVGSKIFS------------------------------------------------------------------ 157 (265)
T ss_pred CHHHHHHHHHHHHH------------------------------------------------------------------
Confidence 45566655543210
Q ss_pred CCCCCCCCCHHHHHHHHhHHhhccchhhhHHHHhhhhhhccCCcCCcHHHHHHHHHHHHHHHHHcCC-CCCcCCCcccch
Q psy13748 168 KNDALYPKDPKVRALVDQRLHFDSGVLFSALRNIGLKIFFKNEKEIPEEDKLRAREALDFAEKFLQG-RKFITGDTYNIA 246 (296)
Q Consensus 168 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~-~~~l~g~~~t~a 246 (296)
.+... ...... .+...+.+.+.+..+|+.|++ ++||+|+++|+|
T Consensus 158 -----------------------------~~~~~----~~~~~~--~~~~~~~l~~~l~~LE~~L~~~g~yl~Gd~~SlA 202 (265)
T PLN02817 158 -----------------------------TFIGF----LKSKDP--GDGTEQALLDELTSFDDYIKENGPFINGEKISAA 202 (265)
T ss_pred -----------------------------HHHHH----hccCCc--chHHHHHHHHHHHHHHHHHhcCCCeeCCCCCCHH
Confidence 00000 000000 112234567778899999974 689999999999
Q ss_pred hHhHHHHHHHHHhh-----CCC-CCCchhHHHHHHHHhccccCcccCC
Q psy13748 247 DFSIYTTASALVAL-----VPG-LEKYPNLAKYFDLCKSSFKGISHDE 288 (296)
Q Consensus 247 D~~~~~~l~~~~~~-----~~~-~~~~p~l~~~~~~~~~~~p~~~~~~ 288 (296)
|+.+++.+.++... ++. ...+|+|.+|++++.+ +|+|++..
T Consensus 203 Di~l~p~L~~l~~~~~~~~~~~i~~~~P~L~~w~~ri~~-rps~~~~~ 249 (265)
T PLN02817 203 DLSLGPKLYHLEIALGHYKNWSVPDSLPFVKSYMKNIFS-MESFVKTR 249 (265)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHHhc-chhHhhcC
Confidence 99999998766432 333 4679999999999999 99999843
No 20
>KOG1695|consensus
Probab=99.91 E-value=4.9e-23 Score=164.10 Aligned_cols=190 Identities=22% Similarity=0.219 Sum_probs=139.8
Q ss_pred Cc-cEEEecCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEeeCCeeeeecHHHHHHHHHhcC
Q psy13748 1 MG-LILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDGDLIVWDSHAINAYLVSAYG 79 (296)
Q Consensus 1 M~-~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~~es~~I~~yl~~~~~ 79 (296)
|+ ++|++++..+++..+|++++..|++|+.+++..... -.......|.|++|+|..||..|.+|.||++||+++||
T Consensus 1 m~~ykL~Yf~~RG~ae~iR~lf~~a~v~fEd~r~~~~~~---w~~~K~~~pfgqlP~l~vDg~~i~QS~AI~RyLArk~g 77 (206)
T KOG1695|consen 1 MPPYKLTYFNIRGLAEPIRLLFAYAGVSFEDKRITMEDA---WEELKDKMPFGQLPVLEVDGKKLVQSRAILRYLARKFG 77 (206)
T ss_pred CCceEEEecCcchhHHHHHHHHHhcCCCcceeeeccccc---hhhhcccCCCCCCCEEeECCEeeccHHHHHHHHHHHhC
Confidence 66 999999999999999999999999999999987541 12233447888888888888888888888888888887
Q ss_pred CCCCCCCCCHHHHHHHhhhhhccccchhhhhhhhccCcceEeeccCCCCCCccccccCCCCCccEEEeCCEEeeccHHHH
Q psy13748 80 KNDALYPKDPKVRALVDQRLHFDSGVLFSALRNIGVSKTFCSDLYLGWIPINFSPQLNPQHTVPTLEDGDLIVWDSHAIN 159 (296)
Q Consensus 80 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~nP~~~vP~L~~~g~~l~es~aI~ 159 (296)
+.++++.+.++++.+.+...+........+
T Consensus 78 ----l~Gkt~~E~a~vD~i~d~~~D~~~~~~~~~---------------------------------------------- 107 (206)
T KOG1695|consen 78 ----LAGKTEEEEAWVDMIVDQFKDFRWEIFRQP---------------------------------------------- 107 (206)
T ss_pred ----cCCCCHHHHHHHHHHHHhhhhHHHHHHHHh----------------------------------------------
Confidence 677777777777776665554322111100
Q ss_pred HHHHHHhCCCCCCCCCCHHHHHHHHhHHhhccchhhhHHHHhhhhhhccCCcCCcH-HHHHHHHHHHHHHHHHcC--CCC
Q psy13748 160 AYLVSAYGKNDALYPKDPKVRALVDQRLHFDSGVLFSALRNIGLKIFFKNEKEIPE-EDKLRAREALDFAEKFLQ--GRK 236 (296)
Q Consensus 160 ~yl~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~le~~L~--~~~ 236 (296)
.............+ .........++.+++.|. +..
T Consensus 108 ------------------------------------------~~~~~~g~~~~~~~~~~~Pa~~~~~~~~~~~L~~~~sg 145 (206)
T KOG1695|consen 108 ------------------------------------------YTAPEAGKSEEELDKLYLPAKPKYFKILEKILKKNKSG 145 (206)
T ss_pred ------------------------------------------hhhhhhccchhhhhhhhccchHHHHHHHHHHHHhCCCC
Confidence 00000000011011 233466778888888888 457
Q ss_pred CcCCCcccchhHhHHHHHHHHHhh-CCC-CCCchhHHHHHHHHhccccCccc
Q psy13748 237 FITGDTYNIADFSIYTTASALVAL-VPG-LEKYPNLAKYFDLCKSSFKGISH 286 (296)
Q Consensus 237 ~l~g~~~t~aD~~~~~~l~~~~~~-~~~-~~~~p~l~~~~~~~~~~~p~~~~ 286 (296)
||+||++|+||+.++..+..+... ... ...+|+|.++.+++.+ +|.+++
T Consensus 146 flvGd~lT~aDl~i~e~l~~l~~~~~~~~~~~~P~L~a~~~kv~~-~p~ik~ 196 (206)
T KOG1695|consen 146 FLVGDKLTWADLVIAEHLDTLEELLDPSALDHFPKLKAFKERVSS-IPNIKK 196 (206)
T ss_pred eeecCcccHHHHHHHHHHHHHHHhcCchhhccChHHHHHHHHHhc-CchHHH
Confidence 999999999999999999888883 333 6778999999999999 999998
No 21
>TIGR02182 GRXB Glutaredoxin, GrxB family. This model includes the highly abundant E. coli GrxB (Grx2) glutaredoxin which is notably longer than either GrxA or GrxC. Unlike the other two E. coli glutaredoxins, GrxB appears to be unable to reduce ribonucleotide reductase, and may have more to do with resistance to redox stress.
Probab=99.91 E-value=1.1e-22 Score=166.38 Aligned_cols=205 Identities=15% Similarity=0.116 Sum_probs=132.6
Q ss_pred EEEecCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEe-eCCeeeeecHHHHHHHHHhcCCCC
Q psy13748 4 ILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLE-DGDLIVWDSHAINAYLVSAYGKND 82 (296)
Q Consensus 4 ~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~-~~~~~~~es~~I~~yl~~~~~~~~ 82 (296)
|||++..||+|+|||++|.++|++|+.+.++.. +. ....++||.|+||+|+ +||.+++||.+|++||+++|+..
T Consensus 1 ~Ly~~~~sp~~~kvr~~L~~~gl~~e~~~~~~~--~~--~~~~~~np~g~vP~l~~~~g~~l~es~~I~~yL~~~~~~~- 75 (209)
T TIGR02182 1 KLYIYDHCPFCVRARMIFGLKNIPVEKHVLLND--DE--ETPIRMIGAKQVPILQKDDGRAMPESLDIVAYFDKLDGEP- 75 (209)
T ss_pred CeecCCCCChHHHHHHHHHHcCCCeEEEECCCC--cc--hhHHHhcCCCCcceEEeeCCeEeccHHHHHHHHHHhCCCc-
Confidence 699999999999999999999999998776542 22 2347899999999998 89999999999999999999852
Q ss_pred CCCCCCHHHHHHHhhhhhccccchhhhhhhhccCcceEeeccCCCCCCccccccCCCCCccEEEeCCEEeeccHHHHHHH
Q psy13748 83 ALYPKDPKVRALVDQRLHFDSGVLFSALRNIGVSKTFCSDLYLGWIPINFSPQLNPQHTVPTLEDGDLIVWDSHAINAYL 162 (296)
Q Consensus 83 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~nP~~~vP~L~~~g~~l~es~aI~~yl 162 (296)
.+.+ ..++.+++|+.+....+...+...... ...+++
T Consensus 76 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~------------------------------ 112 (209)
T TIGR02182 76 LLTG---KVSPEIEAWLRKVTGYANKLLLPRFAK----------SDLPEF------------------------------ 112 (209)
T ss_pred cCCC---CChHHHHHHHHHHHHHhhhhhcccccc----------CCCccc------------------------------
Confidence 3322 245667777765444332211000000 000000
Q ss_pred HHHhCCCCCCCCCCHHHHHHHHhHHhhccchhhhHHHHhhhhhhccCCcCCcHHHHHHHHHHHHHHHHHcCCCCCcCCCc
Q psy13748 163 VSAYGKNDALYPKDPKVRALVDQRLHFDSGVLFSALRNIGLKIFFKNEKEIPEEDKLRAREALDFAEKFLQGRKFITGDT 242 (296)
Q Consensus 163 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~g~~ 242 (296)
..+..+.....-. ....... .......+...+.+++.++.++++|++++|++| +
T Consensus 113 ------------~~~~~~~~~~~~~-----------~~~~g~~--~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~g-~ 166 (209)
T TIGR02182 113 ------------ATQSARKYFTDKK-----------EASAGNF--SALLNHTPGLLEEINADLEELDKLIDGPNAVNG-E 166 (209)
T ss_pred ------------CCHHHHHHHHHHH-----------HHhcCCH--HHHHccCHHHHHHHHHHHHHHHHHHhCccccCC-C
Confidence 0000000000000 0000000 000011234567788999999999999999965 5
Q ss_pred ccchhHhHHHHHHHHHhhCCCCCCch-hHHHHHHHHhccccCcc
Q psy13748 243 YNIADFSIYTTASALVALVPGLEKYP-NLAKYFDLCKSSFKGIS 285 (296)
Q Consensus 243 ~t~aD~~~~~~l~~~~~~~~~~~~~p-~l~~~~~~~~~~~p~~~ 285 (296)
+|+||+.+++.+.++...+. ..+| +|.+|++||++ ++++.
T Consensus 167 ~TiADi~l~~~l~~~~~~~~--~~~p~~l~~w~~Ri~a-r~~~~ 207 (209)
T TIGR02182 167 LSEDDILVFPLLRNLTLVAG--INWPSRVADYLDNMSK-KSKVP 207 (209)
T ss_pred CCHHHHHHHHHhcCeeeecC--CCCChHHHHHHHHHHH-HhCCC
Confidence 99999999999987665432 1356 99999999998 88753
No 22
>cd03052 GST_N_GDAP1 GST_N family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal TRX-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=99.81 E-value=6.7e-20 Score=123.63 Aligned_cols=73 Identities=33% Similarity=0.439 Sum_probs=69.3
Q ss_pred cEEEecCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEeeCCeeeeecHHHHHHHH
Q psy13748 3 LILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDGDLIVWDSHAINAYLV 75 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~~es~~I~~yl~ 75 (296)
++||+++.|++|++++++|+++|++|+.+.+++..+++..++|.++||.|+||+|++||.+++||.+|++||+
T Consensus 1 ~~ly~~~~s~~s~rv~~~L~e~gl~~e~~~v~~~~~~~~~~~~~~inP~g~vP~L~~~g~~l~Es~aI~~yLe 73 (73)
T cd03052 1 LVLYHWTQSFSSQKVRLVIAEKGLRCEEYDVSLPLSEHNEPWFMRLNPTGEVPVLIHGDNIICDPTQIIDYLE 73 (73)
T ss_pred CEEecCCCCccHHHHHHHHHHcCCCCEEEEecCCcCccCCHHHHHhCcCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 4899999999999999999999999999999988777788999999999999999999999999999999985
No 23
>PLN02907 glutamate-tRNA ligase
Probab=99.81 E-value=5.5e-19 Score=165.87 Aligned_cols=155 Identities=19% Similarity=0.233 Sum_probs=121.4
Q ss_pred CccEEEecCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEe-eCCeeeeecHHHHHHHHHhcC
Q psy13748 1 MGLILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLE-DGDLIVWDSHAINAYLVSAYG 79 (296)
Q Consensus 1 M~~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~-~~~~~~~es~~I~~yl~~~~~ 79 (296)
|+++||+.+.|+ +.++.++|++.|++|+.+. .+|.|+||+|+ +||.+++||.||++||+++++
T Consensus 1 ~~~kLy~~~~S~-~~~v~~~L~~lgv~~e~~~---------------~~p~GkVPvLv~ddG~~L~ES~AIl~YLa~~~p 64 (722)
T PLN02907 1 MEAKLSFPPDSP-PLAVIAAAKVAGVPLTIDP---------------SLKSGSAPTLLFSSGEKLTGTNVLLRYIARSAS 64 (722)
T ss_pred CeEEEEECCCCC-hHHHHHHHHHcCCCcEEee---------------cCCCCCCcEEEECCCCEEECHHHHHHHHHHhCC
Confidence 889999999886 6679999999999998854 25899999998 688999999999999999987
Q ss_pred CCCCCCCCCHHHHHHHhhhhhccccchhhhhhhhccCcceEeeccCCCCCCccccccCCCCCccEEEeCCEEeeccHHHH
Q psy13748 80 KNDALYPKDPKVRALVDQRLHFDSGVLFSALRNIGVSKTFCSDLYLGWIPINFSPQLNPQHTVPTLEDGDLIVWDSHAIN 159 (296)
Q Consensus 80 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~nP~~~vP~L~~~g~~l~es~aI~ 159 (296)
.. .|+|.++.+++++.+|+.+...
T Consensus 65 ~~-~L~p~d~~erAqV~qWL~~~~~------------------------------------------------------- 88 (722)
T PLN02907 65 LP-GFYGQDAFESSQVDEWLDYAPT------------------------------------------------------- 88 (722)
T ss_pred Cc-CCCCCCHHHHHHHHHHHHHHhh-------------------------------------------------------
Confidence 53 5667666666666666543221
Q ss_pred HHHHHHhCCCCCCCCCCHHHHHHHHhHHhhccchhhhHHHHhhhhhhccCCcCCcHHHHHHHHHHHHHHHHHcCCCCCcC
Q psy13748 160 AYLVSAYGKNDALYPKDPKVRALVDQRLHFDSGVLFSALRNIGLKIFFKNEKEIPEEDKLRAREALDFAEKFLQGRKFIT 239 (296)
Q Consensus 160 ~yl~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~ 239 (296)
.. . ...+...++.++.+|++++||+
T Consensus 89 ---------------------------------~~----------------~------~~~l~~~L~~LE~~L~~rtYLv 113 (722)
T PLN02907 89 ---------------------------------FS----------------S------GSEFENACEYVDGYLASRTFLV 113 (722)
T ss_pred ---------------------------------cc----------------c------HHHHHHHHHHHHHHhccCCeec
Confidence 00 0 0134566889999999889999
Q ss_pred CCcccchhHhHHHHHHHHH--hhCCC-CCCchhHHHHHHHHhccccC
Q psy13748 240 GDTYNIADFSIYTTASALV--ALVPG-LEKYPNLAKYFDLCKSSFKG 283 (296)
Q Consensus 240 g~~~t~aD~~~~~~l~~~~--~~~~~-~~~~p~l~~~~~~~~~~~p~ 283 (296)
|+++|+||+++++.+.... ..+.. ...+|+|.+|++++.+ +|+
T Consensus 114 Gd~lTLADIaL~~~L~~~~~~~~~~~~~~~yPnL~RW~erI~a-rPs 159 (722)
T PLN02907 114 GYSLTIADIAIWSGLAGSGQRWESLRKSKKYQNLVRWFNSISA-EYS 159 (722)
T ss_pred CCCCCHHHHHHHHHHHhhhhhhhcccccccCHHHHHHHHHHHh-CCC
Confidence 9999999999998885541 11221 5789999999999999 999
No 24
>PF13417 GST_N_3: Glutathione S-transferase, N-terminal domain; PDB: 3ERG_B 3IBH_A 3ERF_A 3UBL_A 3UBK_A 3IR4_A 3M8N_B 2R4V_A 2PER_A 2R5G_A ....
Probab=99.79 E-value=7.8e-19 Score=119.37 Aligned_cols=74 Identities=35% Similarity=0.433 Sum_probs=69.2
Q ss_pred EEecCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEeeCCeeeeecHHHHHHHHHhcCCC
Q psy13748 5 LHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDGDLIVWDSHAINAYLVSAYGKN 81 (296)
Q Consensus 5 Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~~es~~I~~yl~~~~~~~ 81 (296)
||+++.||+|+|+|++|+++||+|+.+.++... ..+++.+.||.++||+|++||.+++||.+|++||++++++.
T Consensus 1 Ly~~~~Sp~~~kv~~~l~~~~i~~~~~~v~~~~---~~~~~~~~~p~~~vPvL~~~g~~l~dS~~I~~yL~~~~~~~ 74 (75)
T PF13417_consen 1 LYGFPGSPYSQKVRLALEEKGIPYELVPVDPEE---KRPEFLKLNPKGKVPVLVDDGEVLTDSAAIIEYLEERYPGP 74 (75)
T ss_dssp EEEETTSHHHHHHHHHHHHHTEEEEEEEEBTTS---TSHHHHHHSTTSBSSEEEETTEEEESHHHHHHHHHHHSTSS
T ss_pred CCCcCCChHHHHHHHHHHHcCCeEEEeccCccc---chhHHHhhcccccceEEEECCEEEeCHHHHHHHHHHHcCCC
Confidence 899999999999999999999999999998643 37899999999999999999999999999999999999863
No 25
>cd03045 GST_N_Delta_Epsilon GST_N family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites that are easily excreted. They are also implicated in protection against cellular damage by oxidative stress.
Probab=99.79 E-value=6.3e-19 Score=119.71 Aligned_cols=74 Identities=51% Similarity=0.796 Sum_probs=70.0
Q ss_pred cEEEecCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEeeCCeeeeecHHHHHHHHH
Q psy13748 3 LILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDGDLIVWDSHAINAYLVS 76 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~~es~~I~~yl~~ 76 (296)
++||+++.||+|++++++|+++|++|+.+.+++.++++..++|.++||.|+||+|+++|.+++||.+|++||++
T Consensus 1 ~~Ly~~~~~~~~~~v~~~l~~~gi~~e~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~l~es~aI~~yL~~ 74 (74)
T cd03045 1 IDLYYLPGSPPCRAVLLTAKALGLELNLKEVNLMKGEHLKPEFLKLNPQHTVPTLVDNGFVLWESHAILIYLVE 74 (74)
T ss_pred CEEEeCCCCCcHHHHHHHHHHcCCCCEEEEecCccCCcCCHHHHhhCcCCCCCEEEECCEEEEcHHHHHHHHhC
Confidence 68999999999999999999999999999999877777789999999999999999999999999999999974
No 26
>KOG1422|consensus
Probab=99.78 E-value=1.2e-17 Score=129.59 Aligned_cols=175 Identities=17% Similarity=0.193 Sum_probs=133.6
Q ss_pred CCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEeeCCeeeeecHHHHHHHHHhcCCCCCCCCC-C
Q psy13748 10 ASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDGDLIVWDSHAINAYLVSAYGKNDALYPK-D 88 (296)
Q Consensus 10 ~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~~es~~I~~yl~~~~~~~~~l~~~-~ 88 (296)
.||+|+++.+.|+++|++|.++.||+.+ .++||+++.|.|++|+|..|+..++||..|.++|+++++.++ ++. +
T Consensus 20 dcpf~qr~~m~L~~k~~~f~vttVd~~~---kp~~f~~~sp~~~~P~l~~d~~~~tDs~~Ie~~Lee~l~~p~--~~~~~ 94 (221)
T KOG1422|consen 20 DCPFCQRLFMTLELKGVPFKVTTVDLSR---KPEWFLDISPGGKPPVLKFDEKWVTDSDKIEEFLEEKLPPPK--LPTLA 94 (221)
T ss_pred CChhHHHHHHHHHHcCCCceEEEeecCC---CcHHHHhhCCCCCCCeEEeCCceeccHHHHHHHHHHhcCCCC--CcccC
Confidence 6999999999999999999999999955 478999999999999999999999999999999999998642 221 0
Q ss_pred HHHHHHHhhhhhccccchhhhhhhhccCcceEeeccCCCCCCccccccCCCCCccEEEeCCEEeeccHHHHHHHHHHhCC
Q psy13748 89 PKVRALVDQRLHFDSGVLFSALRNIGVSKTFCSDLYLGWIPINFSPQLNPQHTVPTLEDGDLIVWDSHAINAYLVSAYGK 168 (296)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~nP~~~vP~L~~~g~~l~es~aI~~yl~~~~~~ 168 (296)
+.+.
T Consensus 95 ~~E~---------------------------------------------------------------------------- 98 (221)
T KOG1422|consen 95 PPES---------------------------------------------------------------------------- 98 (221)
T ss_pred CHHH----------------------------------------------------------------------------
Confidence 1111
Q ss_pred CCCCCCCCHHHHHHHHhHHhhccchhhhHHHHhhhhhhccCCcCCcHHHHHHHHHHHHHHHHHcCC---CCCcCCCcccc
Q psy13748 169 NDALYPKDPKVRALVDQRLHFDSGVLFSALRNIGLKIFFKNEKEIPEEDKLRAREALDFAEKFLQG---RKFITGDTYNI 245 (296)
Q Consensus 169 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~---~~~l~g~~~t~ 245 (296)
+. +...+...|...+....+...+.....+-..+.+++.+|.. ++||.||++|+
T Consensus 99 ------------as-----------ag~diF~kF~~fi~ksk~~~n~~~e~~Ll~~L~~Ld~yL~sp~~~~Fl~Gd~lt~ 155 (221)
T KOG1422|consen 99 ------------AS-----------AGSDIFAKFSAFIKKSKDAANDGLEKALLKELEKLDDYLKSPSRRKFLDGDKLTL 155 (221)
T ss_pred ------------Hh-----------hHHHHHHHHHHHHhCchhhccchHHHHHHHHHHHHHHHhcCccCCccccCCeeee
Confidence 10 01111112222222333333344456677778999999984 79999999999
Q ss_pred hhHhHHHHHHHHHhh-----CCC-CCCchhHHHHHHHHhccccCcccCCC
Q psy13748 246 ADFSIYTTASALVAL-----VPG-LEKYPNLAKYFDLCKSSFKGISHDEE 289 (296)
Q Consensus 246 aD~~~~~~l~~~~~~-----~~~-~~~~p~l~~~~~~~~~~~p~~~~~~~ 289 (296)
+|+.+++-|+.+... +++ .+.++.+.+|+..+.+ +.+|..+.+
T Consensus 156 aDcsLlPKL~~i~va~k~yk~~~IP~~lt~V~rYl~~~ya-~d~F~~tcp 204 (221)
T KOG1422|consen 156 ADCSLLPKLHHIKVAAKHYKNFEIPASLTGVWRYLKNAYA-RDEFTNTCP 204 (221)
T ss_pred ehhhhchhHHHHHHHHHHhcCCCCchhhhHHHHHHHHHHh-HHHhhcCCc
Confidence 999999999988776 444 5678999999999998 999988444
No 27
>cd03048 GST_N_Ure2p_like GST_N family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The N-terminal TRX-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. Characterized GSTs in this subfamily include Aspergillus fumigatus GSTs 1 and 2, and
Probab=99.78 E-value=1.3e-18 Score=120.32 Aligned_cols=77 Identities=34% Similarity=0.460 Sum_probs=71.1
Q ss_pred ccEEEecCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEeeC---CeeeeecHHHHHHHHHhc
Q psy13748 2 GLILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDG---DLIVWDSHAINAYLVSAY 78 (296)
Q Consensus 2 ~~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~---~~~~~es~~I~~yl~~~~ 78 (296)
|++||+++. |+|++++++|+++|++|+.+.+++..++..+++|.++||.++||+|+++ |..++||.+|++||++++
T Consensus 1 ~~~Ly~~~~-~~~~~v~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~g~~l~eS~aI~~yL~~~~ 79 (81)
T cd03048 1 MITLYTHGT-PNGFKVSIMLEELGLPYEIHPVDISKGEQKKPEFLKINPNGRIPAIVDHNGTPLTVFESGAILLYLAEKY 79 (81)
T ss_pred CeEEEeCCC-CChHHHHHHHHHcCCCcEEEEecCcCCcccCHHHHHhCcCCCCCEEEeCCCCceEEEcHHHHHHHHHHHh
Confidence 479999986 9999999999999999999999986666778999999999999999976 899999999999999998
Q ss_pred C
Q psy13748 79 G 79 (296)
Q Consensus 79 ~ 79 (296)
+
T Consensus 80 ~ 80 (81)
T cd03048 80 D 80 (81)
T ss_pred C
Confidence 7
No 28
>cd03050 GST_N_Theta GST_N family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenation of dihalomethanes. This is an essential process in methylotrophic bacteria to enable them to use chloromethane and DC
Probab=99.78 E-value=1.5e-18 Score=118.39 Aligned_cols=76 Identities=34% Similarity=0.416 Sum_probs=70.9
Q ss_pred cEEEecCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEeeCCeeeeecHHHHHHHHHhc
Q psy13748 3 LILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDGDLIVWDSHAINAYLVSAY 78 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~~es~~I~~yl~~~~ 78 (296)
++||+++.|++|++++++|+++|++|+.+.++...++...+++.++||.|+||+|+++|.+++||.+|++||++++
T Consensus 1 ~~ly~~~~s~~~~~v~~~l~~~g~~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~Yl~~~~ 76 (76)
T cd03050 1 LKLYYDLMSQPSRAVYIFLKLNKIPFEECPIDLRKGEQLTPEFKKINPFGKVPAIVDGDFTLAESVAILRYLARKF 76 (76)
T ss_pred CEEeeCCCChhHHHHHHHHHHcCCCcEEEEecCCCCCcCCHHHHHhCcCCCCCEEEECCEEEEcHHHHHHHHHhhC
Confidence 5899999999999999999999999999999987766667899999999999999999999999999999999864
No 29
>cd03041 GST_N_2GST_N GST_N family, 2 repeats of the N-terminal domain of soluble GSTs (2 GST_N) subfamily; composed of uncharacterized proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.77 E-value=1.7e-18 Score=118.25 Aligned_cols=75 Identities=32% Similarity=0.419 Sum_probs=66.5
Q ss_pred ccEEEecCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEee--CCeeeeecHHHHHHHHHhc
Q psy13748 2 GLILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLED--GDLIVWDSHAINAYLVSAY 78 (296)
Q Consensus 2 ~~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~--~~~~~~es~~I~~yl~~~~ 78 (296)
|++||+++.||+|+|++++|.++||+|+.+.++. ++...+++++.||.++||+|++ +|.+++||.+|++||++++
T Consensus 1 ~~~Ly~~~~sp~~~kv~~~L~~~gi~y~~~~v~~--~~~~~~~~~~~~p~~~vP~l~~~~~~~~l~es~~I~~yL~~~~ 77 (77)
T cd03041 1 PLELYEFEGSPFCRLVREVLTELELDVILYPCPK--GSPKRDKFLEKGGKVQVPYLVDPNTGVQMFESADIVKYLFKTY 77 (77)
T ss_pred CceEecCCCCchHHHHHHHHHHcCCcEEEEECCC--ChHHHHHHHHhCCCCcccEEEeCCCCeEEEcHHHHHHHHHHhC
Confidence 4799999999999999999999999999988753 3445678999999999999986 4789999999999999864
No 30
>cd03053 GST_N_Phi GST_N family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Phi GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes are highly reactive toward chloroacetanilide and thiocarbamate herbicides. Some Phi GSTs have other functions including t
Probab=99.76 E-value=2.8e-18 Score=117.12 Aligned_cols=75 Identities=41% Similarity=0.546 Sum_probs=70.0
Q ss_pred cEEEecCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEeeCCeeeeecHHHHHHHHHh
Q psy13748 3 LILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDGDLIVWDSHAINAYLVSA 77 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~~es~~I~~yl~~~ 77 (296)
++||+++.||+|+++|++|+++|++|+.+.++...+++..++|.++||.|++|+|+++|..++||.+|++||+++
T Consensus 2 ~~Ly~~~~s~~s~~v~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~P~~~vP~l~~~g~~l~es~aI~~yL~~~ 76 (76)
T cd03053 2 LKLYGAAMSTCVRRVLLCLEEKGVDYELVPVDLTKGEHKSPEHLARNPFGQIPALEDGDLKLFESRAITRYLAEK 76 (76)
T ss_pred eEEEeCCCChhHHHHHHHHHHcCCCcEEEEeCccccccCCHHHHhhCCCCCCCEEEECCEEEEcHHHHHHHHhhC
Confidence 689999999999999999999999999999998766667789999999999999999999999999999999863
No 31
>cd03059 GST_N_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal TRX-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=99.76 E-value=4.7e-18 Score=115.03 Aligned_cols=73 Identities=29% Similarity=0.396 Sum_probs=67.7
Q ss_pred cEEEecCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEeeCCeeeeecHHHHHHHHHhc
Q psy13748 3 LILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDGDLIVWDSHAINAYLVSAY 78 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~~es~~I~~yl~~~~ 78 (296)
++||+.+.||+|++++++|+++|++|+.+.++.. +..++++++||.|+||+|++||..++||.+|++||++++
T Consensus 1 ~~ly~~~~~~~~~~v~~~l~~~gi~~~~~~v~~~---~~~~~~~~~~p~~~vP~l~~~~~~l~es~aI~~yL~~~~ 73 (73)
T cd03059 1 MTLYSGPDDVYSHRVRIVLAEKGVSVEIIDVDPD---NPPEDLAELNPYGTVPTLVDRDLVLYESRIIMEYLDERF 73 (73)
T ss_pred CEEEECCCChhHHHHHHHHHHcCCccEEEEcCCC---CCCHHHHhhCCCCCCCEEEECCEEEEcHHHHHHHHHhhC
Confidence 6899999999999999999999999999998863 456899999999999999999999999999999999864
No 32
>cd03056 GST_N_4 GST_N family, unknown subfamily 4; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.75 E-value=4.1e-18 Score=115.36 Aligned_cols=73 Identities=33% Similarity=0.433 Sum_probs=68.7
Q ss_pred cEEEecCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEeeCCeeeeecHHHHHHHH
Q psy13748 3 LILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDGDLIVWDSHAINAYLV 75 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~~es~~I~~yl~ 75 (296)
++||+++.||+|++++++|+++|++|+.+.+++..+++..++|+++||.+++|+|+++|..++||.+|++||+
T Consensus 1 ~~Ly~~~~~~~~~~v~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~i~es~aI~~yl~ 73 (73)
T cd03056 1 MKLYGFPLSGNCYKVRLLLALLGIPYEWVEVDILKGETRTPEFLALNPNGEVPVLELDGRVLAESNAILVYLA 73 (73)
T ss_pred CEEEeCCCCccHHHHHHHHHHcCCCcEEEEecCCCcccCCHHHHHhCCCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 5899999999999999999999999999999987667778999999999999999999999999999999984
No 33
>cd03047 GST_N_2 GST_N family, unknown subfamily 2; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The sequence from Burkholderia cepacia was identified as part of a gene cluster involved in the degradation of 2,4,5-trichlorophenoxyacetic acid. Some GSTs (e.g. Class Zeta and Delta) are known to catalyze dechlorination reactions.
Probab=99.74 E-value=6.6e-18 Score=114.24 Aligned_cols=73 Identities=37% Similarity=0.503 Sum_probs=67.5
Q ss_pred cEEEecCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEeeCCeeeeecHHHHHHHH
Q psy13748 3 LILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDGDLIVWDSHAINAYLV 75 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~~es~~I~~yl~ 75 (296)
++||+++.|+++++++++|+++|++|+.+.++...+++..++|.++||.|+||+|++||..++||.+|++||+
T Consensus 1 ~~l~~~~~s~~~~~v~~~L~~~~l~~~~~~~~~~~~~~~~~~~~~~nP~~~vP~L~~~~~~l~eS~aI~~YL~ 73 (73)
T cd03047 1 LTIWGRRSSINVQKVLWLLDELGLPYERIDAGGQFGGLDTPEFLAMNPNGRVPVLEDGDFVLWESNAILRYLA 73 (73)
T ss_pred CEEEecCCCcchHHHHHHHHHcCCCCEEEEeccccccccCHHHHhhCCCCCCCEEEECCEEEECHHHHHHHhC
Confidence 5899999999999999999999999999998876555667899999999999999999999999999999984
No 34
>cd03058 GST_N_Tau GST_N family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropionate herbicides. In addition, Tau GSTs play important roles in intracellular signalling, biosynthesis of anthocyanin,
Probab=99.74 E-value=9.3e-18 Score=113.86 Aligned_cols=73 Identities=29% Similarity=0.325 Sum_probs=66.9
Q ss_pred cEEEecCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCC-ccccEEeeCCeeeeecHHHHHHHHHhc
Q psy13748 3 LILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQ-HTVPTLEDGDLIVWDSHAINAYLVSAY 78 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~-~~vP~l~~~~~~~~es~~I~~yl~~~~ 78 (296)
++||+++.||+|+|++++|+++|++|+.+.++.. ...++|++.||. |++|+|++||.+++||.+|++||++++
T Consensus 1 ~~Ly~~~~sp~~~~v~~~l~~~gl~~~~~~~~~~---~~~~~~~~~~p~~~~vP~l~~~~~~l~eS~aI~~yL~~~~ 74 (74)
T cd03058 1 VKLLGAWASPFVLRVRIALALKGVPYEYVEEDLG---NKSELLLASNPVHKKIPVLLHNGKPICESLIIVEYIDEAW 74 (74)
T ss_pred CEEEECCCCchHHHHHHHHHHcCCCCEEEEeCcc---cCCHHHHHhCCCCCCCCEEEECCEEeehHHHHHHHHHhhC
Confidence 6899999999999999999999999999988764 456889999995 999999999999999999999999864
No 35
>cd03051 GST_N_GTT2_like GST_N family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensitivity to heat shock.
Probab=99.74 E-value=8.8e-18 Score=114.00 Aligned_cols=73 Identities=38% Similarity=0.519 Sum_probs=67.4
Q ss_pred cEEEecCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEe-eCCeeeeecHHHHHHHH
Q psy13748 3 LILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLE-DGDLIVWDSHAINAYLV 75 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~-~~~~~~~es~~I~~yl~ 75 (296)
++||+++.||+|+|+|++|+++|++|+.+.++...+++..+++.++||.+++|+|+ +||..++||.+|++||+
T Consensus 1 ~~Ly~~~~s~~~~~~~~~L~~~~l~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~l~es~aI~~yLe 74 (74)
T cd03051 1 MKLYDSPTAPNPRRVRIFLAEKGIDVPLVTVDLAAGEQRSPEFLAKNPAGTVPVLELDDGTVITESVAICRYLE 74 (74)
T ss_pred CEEEeCCCCcchHHHHHHHHHcCCCceEEEeecccCccCCHHHHhhCCCCCCCEEEeCCCCEEecHHHHHHHhC
Confidence 58999999999999999999999999999999876666678999999999999998 67889999999999985
No 36
>cd03057 GST_N_Beta GST_N family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site forms a covalent bond with GSH.
Probab=99.73 E-value=1.5e-17 Score=113.70 Aligned_cols=76 Identities=29% Similarity=0.328 Sum_probs=69.5
Q ss_pred cEEEecCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEeeC-CeeeeecHHHHHHHHHhcC
Q psy13748 3 LILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDG-DLIVWDSHAINAYLVSAYG 79 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~-~~~~~es~~I~~yl~~~~~ 79 (296)
++||+++.| ++++++++|+++|++|+.+.++..++++..++|+++||.+++|+|+++ |..++||.+|++||+++++
T Consensus 1 ~~Ly~~~~~-~~~~v~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~np~~~vP~l~~~~g~~l~eS~aI~~yL~~~~p 77 (77)
T cd03057 1 MKLYYSPGA-CSLAPHIALEELGLPFELVRVDLRTKTQKGADYLAINPKGQVPALVLDDGEVLTESAAILQYLADLHP 77 (77)
T ss_pred CEEEeCCCC-chHHHHHHHHHcCCCceEEEEecccCccCCHhHHHhCCCCCCCEEEECCCcEEEcHHHHHHHHHHhCc
Confidence 589999976 589999999999999999999987777778999999999999999966 8999999999999999874
No 37
>cd03061 GST_N_CLIC GST_N family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division and apoptosis. They can exist in both water-soluble and membrane-bound states, and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and it adopts a fold similar to GSTs, containing an N-terminal domain with a TRX fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. The CLI
Probab=99.73 E-value=1.2e-17 Score=115.84 Aligned_cols=69 Identities=16% Similarity=0.152 Sum_probs=64.3
Q ss_pred CCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEeeCCeeeeecHHHHHHHHHhcCC
Q psy13748 9 IASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDGDLIVWDSHAINAYLVSAYGK 80 (296)
Q Consensus 9 ~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~~es~~I~~yl~~~~~~ 80 (296)
..||+|+++|++|++|||+|+.+.+++.+ .++||+++||.|+||+|+++|.+++||.+|++||++++..
T Consensus 20 g~cpf~~rvrl~L~eKgi~ye~~~vd~~~---~p~~~~~~nP~g~vPvL~~~~~~i~eS~~I~eYLde~~~~ 88 (91)
T cd03061 20 GNCPFCQRLFMVLWLKGVVFNVTTVDMKR---KPEDLKDLAPGTQPPFLLYNGEVKTDNNKIEEFLEETLCP 88 (91)
T ss_pred CCChhHHHHHHHHHHCCCceEEEEeCCCC---CCHHHHHhCCCCCCCEEEECCEEecCHHHHHHHHHHHccC
Confidence 46999999999999999999999999854 4689999999999999999999999999999999999875
No 38
>PF02798 GST_N: Glutathione S-transferase, N-terminal domain; InterPro: IPR004045 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of Cephalopoda is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Soluble GSTs activate glutathione (GSH) to GS-. In many GSTs, this is accomplished by a Tyr at H-bonding distance from the sulphur of GSH. These enzymes catalyse nucleophilic attack by reduced glutathione (GSH) on nonpolar compounds that contain an electrophillic carbon, nitrogen, or sulphur atom []. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold, with each monomer composed of two distinct domains []. The N-terminal domain forms a thioredoxin-like fold that binds the glutathione moiety, while the C-terminal domain contains several hydrophobic alpha-helices that specifically bind hydrophobic substrates. This entry represents the N-terminal domain of GST.; GO: 0005515 protein binding; PDB: 2VCT_H 2WJU_B 4ACS_A 1BYE_D 1AXD_B 2VCV_P 1TDI_A 1JLV_D 1Y6E_A 1U88_B ....
Probab=99.73 E-value=1.9e-17 Score=112.60 Aligned_cols=74 Identities=35% Similarity=0.477 Sum_probs=64.7
Q ss_pred CccEEEecCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCC-ccccEEeeC-CeeeeecHHHHHHHHH
Q psy13748 1 MGLILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQ-HTVPTLEDG-DLIVWDSHAINAYLVS 76 (296)
Q Consensus 1 M~~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~-~~vP~l~~~-~~~~~es~~I~~yl~~ 76 (296)
|.++||.++. ++.++|++|+++|++|+.+.++...+++.+++|.+.||. |+||+|+++ |..++||.||++||++
T Consensus 1 ~~l~l~~~~~--~~~~~r~~l~~~gv~~e~~~v~~~~~~~~~~e~~~~~p~~g~vP~l~~~~~~~l~es~AI~~YLa~ 76 (76)
T PF02798_consen 1 MTLTLYNGRG--RSERIRLLLAEKGVEYEDVRVDFEKGEHKSPEFLAINPMFGKVPALEDGDGFVLTESNAILRYLAR 76 (76)
T ss_dssp EEEEEESSST--TTHHHHHHHHHTT--EEEEEEETTTTGGGSHHHHHHTTTSSSSSEEEETTTEEEESHHHHHHHHHH
T ss_pred CEEEEECCCC--chHHHHHHHHHhcccCceEEEecccccccchhhhhcccccceeeEEEECCCCEEEcHHHHHHHhCC
Confidence 4456666555 899999999999999999999998887778999999999 999999988 9999999999999985
No 39
>cd03046 GST_N_GTT1_like GST_N family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endoplasmic reticulum. Its expression is induced after diauxic shift and remains high throughout the stationary phase. S. pomb
Probab=99.73 E-value=2.2e-17 Score=112.65 Aligned_cols=76 Identities=37% Similarity=0.479 Sum_probs=69.7
Q ss_pred cEEEecCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEeeCCeeeeecHHHHHHHHHhcC
Q psy13748 3 LILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDGDLIVWDSHAINAYLVSAYG 79 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~~es~~I~~yl~~~~~ 79 (296)
++||+++. +++++++++|+++|++|+.+.++...+++..++|.++||.++||+|+++|.+++||.+|++||+++++
T Consensus 1 ~~l~~~~~-~~~~~v~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~~vP~l~~~g~~l~es~aI~~yL~~~~~ 76 (76)
T cd03046 1 ITLYHLPR-SRSFRILWLLEELGLPYELVLYDRGPGEQAPPEYLAINPLGKVPVLVDGDLVLTESAAIILYLAEKYG 76 (76)
T ss_pred CEEEeCCC-CChHHHHHHHHHcCCCcEEEEeCCCCCccCCHHHHhcCCCCCCCEEEECCEEEEcHHHHHHHHHHhCc
Confidence 58999886 57999999999999999999999876667789999999999999999999999999999999999874
No 40
>cd03042 GST_N_Zeta GST_N family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates but display modest GSH peroxidase activity. They are also implicated in the detoxification of the carcinogen dichloroacetic acid by catalyzing its dechlorination to glyoxylic acid.
Probab=99.73 E-value=1.5e-17 Score=112.51 Aligned_cols=73 Identities=41% Similarity=0.502 Sum_probs=68.7
Q ss_pred cEEEecCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEeeCCeeeeecHHHHHHHH
Q psy13748 3 LILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDGDLIVWDSHAINAYLV 75 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~~es~~I~~yl~ 75 (296)
++||++..|++|+++|++|+++|++|+.+.+++..+++..++|.++||.+++|+|+++|..++||.+|++||+
T Consensus 1 ~~L~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~l~es~aI~~yL~ 73 (73)
T cd03042 1 MILYSYFRSSASYRVRIALNLKGLDYEYVPVNLLKGEQLSPAYRALNPQGLVPTLVIDGLVLTQSLAIIEYLD 73 (73)
T ss_pred CEEecCCCCcchHHHHHHHHHcCCCCeEEEecCccCCcCChHHHHhCCCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 5899999999999999999999999999999987766778999999999999999999999999999999984
No 41
>cd03076 GST_N_Pi GST_N family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an increase in JNK activity, thereby promoting apoptosis. GSTP1 is expressed in various tumors and is the predominant GST in a w
Probab=99.72 E-value=1.3e-17 Score=112.69 Aligned_cols=72 Identities=21% Similarity=0.225 Sum_probs=65.8
Q ss_pred ccEEEecCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEeeCCeeeeecHHHHHHHHH
Q psy13748 2 GLILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDGDLIVWDSHAINAYLVS 76 (296)
Q Consensus 2 ~~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~~es~~I~~yl~~ 76 (296)
+++||+++.|++|+++|++|+++|++|+.+.++.. +..++++++||.|+||+|++||.+++||.+|++||++
T Consensus 1 ~~~Ly~~~~~~~~~~v~~~L~~~~i~~e~~~v~~~---~~~~~~~~~~p~~~vP~l~~~~~~l~es~aI~~yL~~ 72 (73)
T cd03076 1 PYTLTYFPVRGRAEAIRLLLADQGISWEEERVTYE---EWQESLKPKMLFGQLPCFKDGDLTLVQSNAILRHLGR 72 (73)
T ss_pred CcEEEEeCCcchHHHHHHHHHHcCCCCEEEEecHH---HhhhhhhccCCCCCCCEEEECCEEEEcHHHHHHHHhc
Confidence 47999999999999999999999999999999862 3356789999999999999999999999999999975
No 42
>cd03044 GST_N_EF1Bgamma GST_N family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal TRX-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role in prot
Probab=99.72 E-value=2.5e-17 Score=111.94 Aligned_cols=73 Identities=22% Similarity=0.263 Sum_probs=67.2
Q ss_pred cEEEecCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEee-CCeeeeecHHHHHHHHH
Q psy13748 3 LILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLED-GDLIVWDSHAINAYLVS 76 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~-~~~~~~es~~I~~yl~~ 76 (296)
.+||+++.|++|++++++|+++|++|+.+.++...+ +.+++|+++||.|++|+|+. ||.+++||.+|++||++
T Consensus 1 ~~Ly~~~~~~~~~~~~~~l~~~gi~~~~~~v~~~~~-~~~~~~~~~nP~~~vP~L~~~~g~~l~es~aI~~yL~~ 74 (75)
T cd03044 1 GTLYTYPGNPRSLKILAAAKYNGLDVEIVDFQPGKE-NKTPEFLKKFPLGKVPAFEGADGFCLFESNAIAYYVAN 74 (75)
T ss_pred CeEecCCCCccHHHHHHHHHHcCCceEEEecccccc-cCCHHHHHhCCCCCCCEEEcCCCCEEeeHHHHHHHHhh
Confidence 489999999999999999999999999999998653 67899999999999999995 58999999999999975
No 43
>cd03060 GST_N_Omega_like GST_N family, Omega-like subfamily; composed of uncharacterized proteins with similarity to class Omega GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. Like Omega enzymes, proteins in this subfamily contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a r
Probab=99.70 E-value=5.8e-17 Score=108.95 Aligned_cols=69 Identities=23% Similarity=0.280 Sum_probs=63.2
Q ss_pred cEEEecCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEee-CCeeeeecHHHHHHH
Q psy13748 3 LILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLED-GDLIVWDSHAINAYL 74 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~-~~~~~~es~~I~~yl 74 (296)
.+||+++.||+|+|++++|+++|++|+.+.++... ..++|+++||.|+||+|++ ||..++||.+|++|+
T Consensus 1 ~~ly~~~~~p~~~rv~~~L~~~gl~~e~~~v~~~~---~~~~~~~~np~~~vP~L~~~~g~~l~eS~aI~~y~ 70 (71)
T cd03060 1 PILYSFRRCPYAMRARMALLLAGITVELREVELKN---KPAEMLAASPKGTVPVLVLGNGTVIEESLDIMRWA 70 (71)
T ss_pred CEEEecCCCcHHHHHHHHHHHcCCCcEEEEeCCCC---CCHHHHHHCCCCCCCEEEECCCcEEecHHHHHHhh
Confidence 37999999999999999999999999999998753 3589999999999999986 599999999999996
No 44
>cd03039 GST_N_Sigma_like GST_N family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition of platelet aggregation, bronchoconstriction, vasodilation and mediation of allergy and inflammation. Other class Sigma
Probab=99.69 E-value=6.4e-17 Score=109.09 Aligned_cols=72 Identities=21% Similarity=0.128 Sum_probs=64.5
Q ss_pred cEEEecCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEeeCCeeeeecHHHHHHHHH
Q psy13748 3 LILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDGDLIVWDSHAINAYLVS 76 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~~es~~I~~yl~~ 76 (296)
++||+++.|++|+++|++|+++|++|+.+.++...+ ..++|.++||.+++|+|+++|..++||.+|++||++
T Consensus 1 ~~Ly~~~~~~~~~~v~~~l~~~gi~~e~~~~~~~~~--~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~yL~~ 72 (72)
T cd03039 1 YKLTYFNIRGRGEPIRLLLADAGVEYEDVRITYEEW--PELDLKPTLPFGQLPVLEIDGKKLTQSNAILRYLAR 72 (72)
T ss_pred CEEEEEcCcchHHHHHHHHHHCCCCcEEEEeCHHHh--hhhhhccCCcCCCCCEEEECCEEEEecHHHHHHhhC
Confidence 689999999999999999999999999999887532 234588999999999999999999999999999963
No 45
>KOG4244|consensus
Probab=99.68 E-value=7.9e-16 Score=123.81 Aligned_cols=211 Identities=18% Similarity=0.143 Sum_probs=140.9
Q ss_pred cEEEecC-------CCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEeeCCeeeeecHHHHHHHH
Q psy13748 3 LILHEII-------ASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDGDLIVWDSHAINAYLV 75 (296)
Q Consensus 3 ~~Ly~~~-------~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~~es~~I~~yl~ 75 (296)
+-||.++ .||+|.|+..+|...+||||.+...+ ...++.|++|.++-||+-+.||.-|..+|.
T Consensus 46 VYLyQF~R~~~~PnLSPfClKvEt~lR~~~IpYE~~~~~~----------~~rSr~G~lPFIELNGe~iaDS~~I~~~L~ 115 (281)
T KOG4244|consen 46 VYLYQFPRTKTCPNLSPFCLKVETFLRAYDIPYEIVDCSL----------KRRSRNGTLPFIELNGEHIADSDLIEDRLR 115 (281)
T ss_pred EEEEeccccCCCCCCChHHHHHHHHHHHhCCCceeccccc----------eeeccCCCcceEEeCCeeccccHHHHHHHH
Confidence 3466665 69999999999999999999877654 246789999999999999999999999999
Q ss_pred HhcCCCCCCCCCCHHHHHHHhhhhhccccchhhhhhhhccCcceEeeccCCCCCCccccccCCCCCccEEEeCCEEeecc
Q psy13748 76 SAYGKNDALYPKDPKVRALVDQRLHFDSGVLFSALRNIGVSKTFCSDLYLGWIPINFSPQLNPQHTVPTLEDGDLIVWDS 155 (296)
Q Consensus 76 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~nP~~~vP~L~~~g~~l~es 155 (296)
+.++-+.. -++++|++...+..++++++...+.+.-..+
T Consensus 116 ~hf~~~~~---L~~e~~a~s~Al~rm~dnhL~~~l~y~k~~~-------------------------------------- 154 (281)
T KOG4244|consen 116 KHFKIPDD---LSAEQRAQSRALSRMADNHLFWILLYYKGAD-------------------------------------- 154 (281)
T ss_pred HHcCCCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHhhhcc--------------------------------------
Confidence 98885422 4578899999999988887776544331110
Q ss_pred HHHHHHHHHHhCCCCCCCCCCHHHHHHHHh--HHhhccchhhhHHHHhhhhhhccCCcCCcHHHHHHHHHHHHHHHHHcC
Q psy13748 156 HAINAYLVSAYGKNDALYPKDPKVRALVDQ--RLHFDSGVLFSALRNIGLKIFFKNEKEIPEEDKLRAREALDFAEKFLQ 233 (296)
Q Consensus 156 ~aI~~yl~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~ 233 (296)
.+.....-+..+ +.+- -..-+.. |..+..+.+. ......+ +.- ..++..+.+++-++.++..|+
T Consensus 155 ~~~~~~~~~~~~----l~~~---l~~~l~~~~~~~~f~~kv~----~r~~g~I-G~f--~~~Ei~ell~rDlr~i~~~Lg 220 (281)
T KOG4244|consen 155 DAWLNTDRKLIG----LPGF---LFPLLLPLFWKAIFGKKVY----KRSTGAI-GDF--ESAEIDELLHRDLRAISDYLG 220 (281)
T ss_pred hHHHHHHHhccC----cccc---chHHHHHHHHHHHHHHHHH----HHhhccc-cCc--CHHHHHHHHHHHHHHHHHHhC
Confidence 001111111111 0000 0000111 1111111110 0000000 000 133466778999999999999
Q ss_pred CCCCcCCCcccchhHhHHHHHHHHHhhCCC-------CCCchhHHHHHHHHhc
Q psy13748 234 GRKFITGDTYNIADFSIYTTASALVALVPG-------LEKYPNLAKYFDLCKS 279 (296)
Q Consensus 234 ~~~~l~g~~~t~aD~~~~~~l~~~~~~~~~-------~~~~p~l~~~~~~~~~ 279 (296)
+++||+|+++|-+|+.+++.|+.+.. ++. -.++|+|..|.+|+++
T Consensus 221 ~KkflfGdkit~~DatvFgqLa~v~Y-P~~~~i~d~le~d~p~l~eYceRIr~ 272 (281)
T KOG4244|consen 221 DKKFLFGDKITPADATVFGQLAQVYY-PFRSHISDLLEGDFPNLLEYCERIRK 272 (281)
T ss_pred CCccccCCCCCcceeeehhhhhheec-cCCCcHHHHHhhhchHHHHHHHHHHH
Confidence 99999999999999999999987665 321 4679999999999986
No 46
>cd03075 GST_N_Mu GST_N family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the most abundant GSTs in human liver, skeletal muscle and brain, and are believed to provide protection against diseases inc
Probab=99.68 E-value=1.8e-16 Score=109.35 Aligned_cols=76 Identities=21% Similarity=0.183 Sum_probs=65.2
Q ss_pred cEEEecCCCchhHHHHHHHHHhCCceeEEEecccccccc-hHHHHh-----hCCCccccEEeeCCeeeeecHHHHHHHHH
Q psy13748 3 LILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQF-SDEYLK-----LNPQHTVPTLEDGDLIVWDSHAINAYLVS 76 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~-~~~~~~-----~~p~~~vP~l~~~~~~~~es~~I~~yl~~ 76 (296)
.+||++..++.|+++|++|+++|++|+.+.+++.++++. .+++.+ .+|.|+||+|++||.+++||.||++||++
T Consensus 1 ~~l~y~~~~~~~~~~~~~l~~~gi~~e~~~v~~~~~~~~~~~~~~~~~~~~~~P~g~vP~L~~~g~~l~ES~AIl~YLa~ 80 (82)
T cd03075 1 PTLGYWDIRGLAQPIRLLLEYTGEKYEEKRYELGDAPDYDRSQWLNEKFKLGLDFPNLPYYIDGDVKLTQSNAILRYIAR 80 (82)
T ss_pred CEEEEeCCccccHHHHHHHHHcCCCcEEEEeccCCccccchHhhhccchhcCCcCCCCCEEEECCEEEeehHHHHHHHhh
Confidence 379999999999999999999999999999998765543 345542 23999999999999999999999999987
Q ss_pred hc
Q psy13748 77 AY 78 (296)
Q Consensus 77 ~~ 78 (296)
++
T Consensus 81 ~~ 82 (82)
T cd03075 81 KH 82 (82)
T ss_pred cC
Confidence 64
No 47
>cd03055 GST_N_Omega GST_N family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a redox active residue capable of reducing GSH mixed disulfides in a monothiol mechanism. Polymorphisms of the class Omega
Probab=99.68 E-value=1.5e-16 Score=111.72 Aligned_cols=71 Identities=30% Similarity=0.347 Sum_probs=64.8
Q ss_pred ccEEEecCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEeeC-CeeeeecHHHHHHHH
Q psy13748 2 GLILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDG-DLIVWDSHAINAYLV 75 (296)
Q Consensus 2 ~~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~-~~~~~es~~I~~yl~ 75 (296)
+++||+++.||+|++++++|+++|++|+.+.++... .++++.+.||.+++|+|+++ |..++||.+|++||+
T Consensus 18 ~~~Ly~~~~sp~~~kv~~~L~~~gl~~~~~~v~~~~---~~~~~~~~np~~~vPvL~~~~g~~l~eS~aI~~yLe 89 (89)
T cd03055 18 IIRLYSMRFCPYAQRARLVLAAKNIPHEVININLKD---KPDWFLEKNPQGKVPALEIDEGKVVYESLIICEYLD 89 (89)
T ss_pred cEEEEeCCCCchHHHHHHHHHHcCCCCeEEEeCCCC---CcHHHHhhCCCCCcCEEEECCCCEEECHHHHHHhhC
Confidence 489999999999999999999999999999998743 35779999999999999965 899999999999985
No 48
>cd03037 GST_N_GRX2 GST_N family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD, compared with other GRXs which are 9-12kD in size. GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=99.68 E-value=1.6e-16 Score=106.86 Aligned_cols=70 Identities=14% Similarity=0.083 Sum_probs=61.1
Q ss_pred cEEEecCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEeeC-CeeeeecHHHHHHHHH
Q psy13748 3 LILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDG-DLIVWDSHAINAYLVS 76 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~-~~~~~es~~I~~yl~~ 76 (296)
++||++..||+|+|+|++|+++|++|+.+.++... ....++.||.++||+|+++ |..++||.+|++||++
T Consensus 1 ~~Ly~~~~~p~~~rvr~~L~~~gl~~~~~~~~~~~----~~~~~~~~~~~~vP~L~~~~~~~l~es~aI~~yL~~ 71 (71)
T cd03037 1 MKLYIYEHCPFCVKARMIAGLKNIPVEQIILQNDD----EATPIRMIGAKQVPILEKDDGSFMAESLDIVAFIDE 71 (71)
T ss_pred CceEecCCCcHhHHHHHHHHHcCCCeEEEECCCCc----hHHHHHhcCCCccCEEEeCCCeEeehHHHHHHHHhC
Confidence 58999999999999999999999999998887432 2345678999999999865 8999999999999974
No 49
>cd03080 GST_N_Metaxin_like GST_N family, Metaxin subfamily, Metaxin-like proteins; a heterogenous group of proteins, predominantly uncharacterized, with similarity to metaxins and GSTs. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. One characterized member of this subgroup is a novel GST from Rhodococcus with toluene o-monooxygenase and gamma-glutamylcysteine synthetase activities. Also members are the cadmium-inducible lysosomal protein CDR-1 and its homologs from C. elegans, and the failed axon connections (fax) protein from Drosophila. CDR-1 is an integral membrane protein that functions to protect against cadmium toxicity and may also have a role in osmoregulation to maintain salt balance in C. ele
Probab=99.66 E-value=3.4e-16 Score=106.33 Aligned_cols=68 Identities=28% Similarity=0.259 Sum_probs=61.8
Q ss_pred ccEEEecC-------CCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEeeCCeeeeecHHHHHHH
Q psy13748 2 GLILHEII-------ASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDGDLIVWDSHAINAYL 74 (296)
Q Consensus 2 ~~~Ly~~~-------~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~~es~~I~~yl 74 (296)
|++||+++ .||+|+|++++|+++|++|+.+.++. .++||.|++|+|++||.+++||.+|++||
T Consensus 1 m~~L~~~~~~~~~~~~sp~~~~v~~~L~~~gi~~~~~~~~~----------~~~~p~g~vPvl~~~g~~l~eS~~I~~yL 70 (75)
T cd03080 1 MITLYQFPRAFGVPSLSPFCLKVETFLRMAGIPYENKFGGL----------AKRSPKGKLPFIELNGEKIADSELIIDHL 70 (75)
T ss_pred CEEEEecCCCCCCCCCCHHHHHHHHHHHHCCCCcEEeecCc----------ccCCCCCCCCEEEECCEEEcCHHHHHHHH
Confidence 46999998 68999999999999999999988764 26899999999999999999999999999
Q ss_pred HHhcC
Q psy13748 75 VSAYG 79 (296)
Q Consensus 75 ~~~~~ 79 (296)
+++|+
T Consensus 71 ~~~~~ 75 (75)
T cd03080 71 EEKYG 75 (75)
T ss_pred HHHcC
Confidence 99875
No 50
>cd03049 GST_N_3 GST_N family, unknown subfamily 3; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.66 E-value=2.8e-16 Score=106.29 Aligned_cols=70 Identities=31% Similarity=0.383 Sum_probs=63.8
Q ss_pred cEEEecCCCchhHHHHHHHHH--hCCceeEEEecccccccchHHHHhhCCCccccEEe-eCCeeeeecHHHHHHHH
Q psy13748 3 LILHEIIASPPVRAVKLCLTE--LGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLE-DGDLIVWDSHAINAYLV 75 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~--~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~-~~~~~~~es~~I~~yl~ 75 (296)
++||+++.||+|+++|++|++ +|++|+.+.++. ....++|++.||.++||+|+ +||..++||.+|++||+
T Consensus 1 ~~Ly~~~~s~~~~~~~~~l~~~~~~i~~~~~~~~~---~~~~~~~~~~~p~~~vP~l~~~~g~~l~es~aI~~yLe 73 (73)
T cd03049 1 MKLLYSPTSPYVRKVRVAAHETGLGDDVELVLVNP---WSDDESLLAVNPLGKIPALVLDDGEALFDSRVICEYLD 73 (73)
T ss_pred CEEecCCCCcHHHHHHHHHHHhCCCCCcEEEEcCc---ccCChHHHHhCCCCCCCEEEECCCCEEECHHHHHhhhC
Confidence 589999999999999999999 899999999885 34468999999999999998 68899999999999985
No 51
>cd03038 GST_N_etherase_LigE GST_N family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF.
Probab=99.66 E-value=2.9e-16 Score=109.20 Aligned_cols=70 Identities=31% Similarity=0.361 Sum_probs=61.5
Q ss_pred CCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEeeC-CeeeeecHHHHHHHHHhcC
Q psy13748 9 IASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDG-DLIVWDSHAINAYLVSAYG 79 (296)
Q Consensus 9 ~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~-~~~~~es~~I~~yl~~~~~ 79 (296)
+.||+|+|+|++|.++|++|+.+.++....+...+++ ++||.++||+|++| |.+++||.+|++||+++++
T Consensus 14 ~~Sp~~~kv~~~L~~~~i~~~~~~~~~~~~~~~~~~~-~~~p~~~vP~L~~~~~~~l~eS~aI~~yL~~~~p 84 (84)
T cd03038 14 AFSPNVWKTRLALNHKGLEYKTVPVEFPDIPPILGEL-TSGGFYTVPVIVDGSGEVIGDSFAIAEYLEEAYP 84 (84)
T ss_pred CcCChhHHHHHHHHhCCCCCeEEEecCCCcccccccc-cCCCCceeCeEEECCCCEEeCHHHHHHHHHHhCc
Confidence 5799999999999999999999999876544434455 89999999999988 8999999999999999874
No 52
>cd03077 GST_N_Alpha GST_N family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Alpha subfamily is composed of eukaryotic GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GSTA3-3 catalyzes the isomerization of intermediates in steroid hormone biosynthesis. GSTA4-4 preferentially catalyzes the
Probab=99.65 E-value=9.7e-16 Score=105.03 Aligned_cols=71 Identities=23% Similarity=0.312 Sum_probs=62.2
Q ss_pred cEEEecCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhC-----CCccccEEeeCCeeeeecHHHHHHHHHh
Q psy13748 3 LILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLN-----PQHTVPTLEDGDLIVWDSHAINAYLVSA 77 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~-----p~~~vP~l~~~~~~~~es~~I~~yl~~~ 77 (296)
++||+++.|+.|++++++|+++|++|+.+.++.. +++.+.+ |.|+||+|++||.+++||.||++||+++
T Consensus 2 ~~Ly~~~~~~~~~~v~~~l~~~gi~~e~~~v~~~------~~~~~~~~~~~~~~g~vP~L~~~g~~l~ES~AI~~YL~~~ 75 (79)
T cd03077 2 PVLHYFNGRGRMESIRWLLAAAGVEFEEKFIESA------EDLEKLKKDGSLMFQQVPMVEIDGMKLVQTRAILNYIAGK 75 (79)
T ss_pred CEEEEeCCCChHHHHHHHHHHcCCCcEEEEeccH------HHHHhhccccCCCCCCCCEEEECCEEEeeHHHHHHHHHHH
Confidence 5899999999999999999999999999998752 3333343 5899999999999999999999999998
Q ss_pred cC
Q psy13748 78 YG 79 (296)
Q Consensus 78 ~~ 79 (296)
++
T Consensus 76 ~~ 77 (79)
T cd03077 76 YN 77 (79)
T ss_pred cC
Confidence 86
No 53
>PF13409 GST_N_2: Glutathione S-transferase, N-terminal domain; PDB: 3C8E_B 3M1G_A 3R3E_A 3O3T_A 1RK4_A 1K0O_B 1K0N_A 3QR6_A 3SWL_A 3TGZ_B ....
Probab=99.65 E-value=5e-16 Score=103.87 Aligned_cols=68 Identities=38% Similarity=0.482 Sum_probs=58.3
Q ss_pred CCchhHHHHHHHHHhCCceeEEEecc-cccccchHHHHhhCCCccccEEee-CCeeeeecHHHHHHHHHh
Q psy13748 10 ASPPVRAVKLCLTELGLEAEYKTCNL-LAREQFSDEYLKLNPQHTVPTLED-GDLIVWDSHAINAYLVSA 77 (296)
Q Consensus 10 ~s~~~~~v~~~L~~~gi~~~~~~i~~-~~~~~~~~~~~~~~p~~~vP~l~~-~~~~~~es~~I~~yl~~~ 77 (296)
+||||+|++++|+++|++|+...+.. ..+.+.+++|.++||.|+||+|++ +|.+++||.+|++||+++
T Consensus 1 ~sP~a~Rv~i~l~~~gl~~~~~~v~~~~~~~~~~~~~~~~~p~~~VP~L~~~~g~vi~eS~~I~~yL~~~ 70 (70)
T PF13409_consen 1 FSPFAHRVRIALEEKGLPYEIKVVPLIPKGEQKPPEFLALNPRGKVPVLVDPDGTVINESLAILEYLEEQ 70 (70)
T ss_dssp T-HHHHHHHHHHHHHTGTCEEEEEETTTTBCTTCHBHHHHSTT-SSSEEEETTTEEEESHHHHHHHHHHT
T ss_pred CchHhHHHHHHHHHhCCCCEEEEEeeecCccccChhhhccCcCeEEEEEEECCCCEeeCHHHHHHHHhcC
Confidence 59999999999999999999988844 244556689999999999999996 789999999999999874
No 54
>cd03040 GST_N_mPGES2 GST_N family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated, and a C-terminal soluble domain with a GST-like structure.
Probab=99.64 E-value=7.6e-16 Score=105.25 Aligned_cols=72 Identities=24% Similarity=0.242 Sum_probs=62.2
Q ss_pred cEEEecCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEeeC----CeeeeecHHHHHHHHHhc
Q psy13748 3 LILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDG----DLIVWDSHAINAYLVSAY 78 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~----~~~~~es~~I~~yl~~~~ 78 (296)
++||+++.||+|+|++++|.++||+|+.+.++... .++ ++.||.++||+|+++ |.+++||.+|++||++..
T Consensus 2 i~Ly~~~~~p~c~kv~~~L~~~gi~y~~~~~~~~~----~~~-~~~~~~~~vP~l~~~~~~~~~~l~eS~~I~~yL~~~~ 76 (77)
T cd03040 2 ITLYQYKTCPFCCKVRAFLDYHGIPYEVVEVNPVS----RKE-IKWSSYKKVPILRVESGGDGQQLVDSSVIISTLKTYL 76 (77)
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCceEEEECCchh----HHH-HHHhCCCccCEEEECCCCCccEEEcHHHHHHHHHHHc
Confidence 68999999999999999999999999999887532 122 467999999999854 789999999999999875
Q ss_pred C
Q psy13748 79 G 79 (296)
Q Consensus 79 ~ 79 (296)
|
T Consensus 77 ~ 77 (77)
T cd03040 77 G 77 (77)
T ss_pred C
Confidence 4
No 55
>KOG3029|consensus
Probab=99.63 E-value=1.9e-14 Score=116.39 Aligned_cols=224 Identities=17% Similarity=0.150 Sum_probs=137.6
Q ss_pred cEEEecCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEeeCCeeeeecHHHHHHHHHhcCCCC
Q psy13748 3 LILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDGDLIVWDSHAINAYLVSAYGKND 82 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~~es~~I~~yl~~~~~~~~ 82 (296)
++||.|.+||+|.|||.+|.+.||+|+++.|++... .-++.+...+||+|..+|+.+.||.+|+.-|+.-.....
T Consensus 91 l~LyQyetCPFCcKVrAFLDyhgisY~VVEVnpV~r-----~eIk~SsykKVPil~~~Geqm~dSsvIIs~laTyLq~~~ 165 (370)
T KOG3029|consen 91 LVLYQYETCPFCCKVRAFLDYHGISYAVVEVNPVLR-----QEIKWSSYKKVPILLIRGEQMVDSSVIISLLATYLQDKR 165 (370)
T ss_pred EEEEeeccCchHHHHHHHHhhcCCceEEEEecchhh-----hhccccccccccEEEeccceechhHHHHHHHHHHhccCC
Confidence 789999999999999999999999999999997543 236677889999998777789999999988866442110
Q ss_pred -------CCCC------------------------C-C----HHHHHHHhhhhhccccchhhhhhhhccCcceEeeccCC
Q psy13748 83 -------ALYP------------------------K-D----PKVRALVDQRLHFDSGVLFSALRNIGVSKTFCSDLYLG 126 (296)
Q Consensus 83 -------~l~~------------------------~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 126 (296)
.++| + + -+.+..-+.|-.|.++.+.-
T Consensus 166 q~l~eiiq~yPa~~~~ne~GK~v~~~~NKyflM~~e~d~~~~ke~~~eerkWR~WvDn~lVH------------------ 227 (370)
T KOG3029|consen 166 QDLGEIIQMYPATSFFNEDGKEVNDILNKYFLMYREHDPGVSKETDEEERKWRSWVDNHLVH------------------ 227 (370)
T ss_pred CCHHHHHHhccccccccccccchhhcchhheeeeeccCCCccccchHHHhHHHHHHhhhhhh------------------
Confidence 0111 0 0 11122233333333332210
Q ss_pred CCCCccccccCCCCCccEEEeCCEEeeccHHHHHHHHHHhCCCCCCCCC-CHHHHHHHHhHHhhccchhhhHHHHhhhhh
Q psy13748 127 WIPINFSPQLNPQHTVPTLEDGDLIVWDSHAINAYLVSAYGKNDALYPK-DPKVRALVDQRLHFDSGVLFSALRNIGLKI 205 (296)
Q Consensus 127 ~~~~~~~~~~nP~~~vP~L~~~g~~l~es~aI~~yl~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (296)
=+.|+. =..-.||.+.++|+.+.=. +.-. ...+|... -... +...++...
T Consensus 228 --------LiSPNv--------Yrn~~EsletFewf~q~G~----w~~~FpawEr~la--------vY~G-AtAM~lisK 278 (370)
T KOG3029|consen 228 --------LISPNV--------YRNMGESLETFEWFSQAGE----WDVHFPAWERDLA--------VYCG-ATAMYLISK 278 (370)
T ss_pred --------hcCccc--------ccChhhHHHHHHHHHHcCC----ccccCchHHHHHH--------HHhh-HHHHHHHHH
Confidence 000100 0123567777777765311 1100 11111110 0011 111222222
Q ss_pred hccCCcCCcHHHHHHHHHHHHHHHHHcC-CCCCcCCCcccchhHhHHHHHHHHHhh-CCC-CCCchhHHHHHHHHhc
Q psy13748 206 FFKNEKEIPEEDKLRAREALDFAEKFLQ-GRKFITGDTYNIADFSIYTTASALVAL-VPG-LEKYPNLAKYFDLCKS 279 (296)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~l~~le~~L~-~~~~l~g~~~t~aD~~~~~~l~~~~~~-~~~-~~~~p~l~~~~~~~~~ 279 (296)
..+.... .....+.+.+.++.....|+ +++|+.|+++.+||..+++.+..+..+ .+. .-....+..|+-+|+.
T Consensus 279 ~LKkkhn-i~D~Re~lydA~d~Wvaalgknr~flGG~kPnLaDLsvfGvl~sm~gc~afkd~~q~t~I~eW~~rmea 354 (370)
T KOG3029|consen 279 MLKKKHN-ISDEREHLYDAADQWVAALGKNRPFLGGKKPNLADLSVFGVLRSMEGCQAFKDCLQNTSIGEWYYRMEA 354 (370)
T ss_pred HHHhhcc-cchHHHHHHHHHHHHHHHhCCCCCccCCCCCchhhhhhhhhhhHhhhhhHHHHHHhcchHHHHHHHHHH
Confidence 2222233 33467788888888888886 579999999999999999999887776 222 3334679999999987
No 56
>cd03043 GST_N_1 GST_N family, unknown subfamily 1; composed of uncharacterized proteins, predominantly from bacteria, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.59 E-value=4.4e-15 Score=100.17 Aligned_cols=68 Identities=31% Similarity=0.376 Sum_probs=61.4
Q ss_pred ecCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEeeCCeeeeecHHHHHHHH
Q psy13748 7 EIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDGDLIVWDSHAINAYLV 75 (296)
Q Consensus 7 ~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~~es~~I~~yl~ 75 (296)
+...|++|++++++|+++|++|+.+.++...+ +..++|.++||.|++|+|+++|.+++||.+|++||+
T Consensus 6 ~~~~s~~s~~v~~~L~~~gl~~e~~~v~~~~~-~~~~~~~~~nP~g~vP~L~~~g~~l~eS~aI~~YL~ 73 (73)
T cd03043 6 NKNYSSWSLRPWLLLKAAGIPFEEILVPLYTP-DTRARILEFSPTGKVPVLVDGGIVVWDSLAICEYLA 73 (73)
T ss_pred CCCCCHHHHHHHHHHHHcCCCCEEEEeCCCCc-cccHHHHhhCCCCcCCEEEECCEEEEcHHHHHHHhC
Confidence 45689999999999999999999999987653 356899999999999999999999999999999984
No 57
>COG2999 GrxB Glutaredoxin 2 [Posttranslational modification, protein turnover, chaperones]
Probab=99.55 E-value=3.3e-13 Score=102.04 Aligned_cols=200 Identities=17% Similarity=0.202 Sum_probs=125.7
Q ss_pred cEEEecCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEe-eCCeeeeecHHHHHHHHHhcCCC
Q psy13748 3 LILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLE-DGDLIVWDSHAINAYLVSAYGKN 81 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~-~~~~~~~es~~I~~yl~~~~~~~ 81 (296)
|+||-|..||+|.|+|+++-.+|||++.+....... + ++ .++-...+||+|+ +||..+.||..|++|+++..+++
T Consensus 1 MkLYIYdHCPfcvrarmi~Gl~nipve~~vL~nDDe-~-Tp--~rmiG~KqVPiL~Kedg~~m~ESlDIV~y~d~~~~~~ 76 (215)
T COG2999 1 MKLYIYDHCPFCVRARMIFGLKNIPVELHVLLNDDE-E-TP--IRMIGQKQVPILQKEDGRAMPESLDIVHYVDELDGKP 76 (215)
T ss_pred CceeEeccChHHHHHHHHhhccCCChhhheeccCcc-c-Ch--hhhhcccccceEEccccccchhhhHHHHHHHHhcCch
Confidence 689999999999999999999999999988876442 2 12 3455667899997 88999999999999999998852
Q ss_pred CCCCCCCHHHHHHHhhhhhccccch----hhhhhhhccCcceEeeccCCCCCCccccccCCCCCccEEEeCCEEeeccHH
Q psy13748 82 DALYPKDPKVRALVDQRLHFDSGVL----FSALRNIGVSKTFCSDLYLGWIPINFSPQLNPQHTVPTLEDGDLIVWDSHA 157 (296)
Q Consensus 82 ~~l~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~nP~~~vP~L~~~g~~l~es~a 157 (296)
+.- .+-+..++.|+..+.+-. .+...++-+ |||
T Consensus 77 --~lt--~~~~pai~~wlrkv~~y~nkll~PR~~k~~l--------------~EF------------------------- 113 (215)
T COG2999 77 --LLT--GKVRPAIEAWLRKVNGYLNKLLLPRFAKSAL--------------PEF------------------------- 113 (215)
T ss_pred --hhc--cCcCHHHHHHHHHhcchHhhhhhhhHhhcCC--------------ccc-------------------------
Confidence 221 222344555555444322 222221111 333
Q ss_pred HHHHHHHHhCCCCCCCCCCHHHHHHHHhHHhhccchhhhHHHHhhhhhhccCCcCCcHHHHHHHHHHHHHHHHHcCCCCC
Q psy13748 158 INAYLVSAYGKNDALYPKDPKVRALVDQRLHFDSGVLFSALRNIGLKIFFKNEKEIPEEDKLRAREALDFAEKFLQGRKF 237 (296)
Q Consensus 158 I~~yl~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~ 237 (296)
+++.++-......+-..+.+.. .+ .-.....+++...++.++..+.+..=
T Consensus 114 -----------------~T~sA~~yf~~KKe~s~g~F~~--------~l-----~~t~~~~~~i~~dl~~l~~Li~~~s~ 163 (215)
T COG2999 114 -----------------ATPSARKYFTDKKEASEGSFES--------LL-----NHTAQYLKRIQADLRALDKLIVGPSA 163 (215)
T ss_pred -----------------cCHHHHHHHHhhhhhccccHHH--------HH-----hchHHHHHHHHHHHHHHHHHhcCcch
Confidence 2222211111110001111111 01 01335567788888888888876553
Q ss_pred cCCCcccchhHhHHHHHHHHHhh-CCCCCCchhHHHHHHHHhccccC
Q psy13748 238 ITGDTYNIADFSIYTTASALVAL-VPGLEKYPNLAKYFDLCKSSFKG 283 (296)
Q Consensus 238 l~g~~~t~aD~~~~~~l~~~~~~-~~~~~~~p~l~~~~~~~~~~~p~ 283 (296)
+.| ..+.-|+.+++.|..+..+ |..+. .++..|+.++.+ ...
T Consensus 164 ~n~-~l~~ddi~vFplLRnlt~v~gi~wp--s~v~dy~~~mse-ktq 206 (215)
T COG2999 164 VNG-ELSEDDILVFPLLRNLTLVAGIQWP--SRVADYRDNMSE-KTQ 206 (215)
T ss_pred hcc-ccchhhhhhhHHhccceecccCCCc--HHHHHHHHHHHH-hhC
Confidence 444 4889999999999776665 44332 479999999987 543
No 58
>cd00570 GST_N_family Glutathione S-transferase (GST) family, N-terminal domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK subfamily, a member of the DsbA family). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical doma
Probab=99.55 E-value=2.4e-14 Score=95.64 Aligned_cols=71 Identities=44% Similarity=0.560 Sum_probs=63.4
Q ss_pred cEEEecCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEeeCCeeeeecHHHHHHHH
Q psy13748 3 LILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDGDLIVWDSHAINAYLV 75 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~~es~~I~~yl~ 75 (296)
++||+++.||+|++++++|+++|++|+.+.++...... .++.+.+|.+++|+|+++|..++||.+|++||+
T Consensus 1 ~~ly~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~P~l~~~~~~~~es~~I~~yl~ 71 (71)
T cd00570 1 LKLYYFPGSPRSLRVRLALEEKGLPYELVPVDLGEGEQ--EEFLALNPLGKVPVLEDGGLVLTESLAILEYLA 71 (71)
T ss_pred CEEEeCCCCccHHHHHHHHHHcCCCcEEEEeCCCCCCC--HHHHhcCCCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 58999999999999999999999999999998654322 268889999999999999999999999999984
No 59
>COG0435 ECM4 Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.55 E-value=2e-14 Score=116.14 Aligned_cols=141 Identities=28% Similarity=0.393 Sum_probs=110.4
Q ss_pred CCCccEEEeC---CEEeeccHHHHHHHHHHhCC----CCCCCCCCHHHHHHHHhHHhhccchhhhHHHHhhhhhhccCCc
Q psy13748 139 QHTVPTLEDG---DLIVWDSHAINAYLVSAYGK----NDALYPKDPKVRALVDQRLHFDSGVLFSALRNIGLKIFFKNEK 211 (296)
Q Consensus 139 ~~~vP~L~~~---g~~l~es~aI~~yl~~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (296)
.-+||||+|. .-+-.||..|++.+..+|.+ ...|+|... |.+++.+.++ +++.+++.+....+...+
T Consensus 127 RvTVPVLwDk~~~tIVnNES~eIirm~N~aFde~~~~~~dlyP~~L--r~eId~~n~~----Iy~~vNNGVYk~GFA~tq 200 (324)
T COG0435 127 RVTVPVLWDKKTQTIVNNESAEIIRMFNSAFDEFGASAVDLYPEAL--RTEIDELNKW----IYDTVNNGVYKAGFATTQ 200 (324)
T ss_pred ceeEEEEEecCCCeeecCCcHHHHHHHHHHHHHHhhhccccCCHHH--HHHHHHHHhh----hcccccCceeeecccchH
Confidence 4489999974 34678999999999988853 556666544 6677777665 444455555544444445
Q ss_pred CCcHHHHHHHHHHHHHHHHHcCCCCCcCCCcccchhHhHHHHHHHHHhh--C---CC---CCCchhHHHHHHHHhccccC
Q psy13748 212 EIPEEDKLRAREALDFAEKFLQGRKFITGDTYNIADFSIYTTASALVAL--V---PG---LEKYPNLAKYFDLCKSSFKG 283 (296)
Q Consensus 212 ~~~~~~~~~~~~~l~~le~~L~~~~~l~g~~~t~aD~~~~~~l~~~~~~--~---~~---~~~~p~l~~~~~~~~~~~p~ 283 (296)
++-++....+-+.|+.+|..|+++.||+||++|-||+-+++.|.++..+ + +. ...||+|..|+..+.+ .|.
T Consensus 201 ~aYeea~~~lF~~Ld~lE~~L~~~ryl~Gd~lTEAD~RLftTlvRFD~VYvgHFKCN~~rI~dypnL~~yLr~LYq-~pg 279 (324)
T COG0435 201 EAYEEAVKKLFEALDKLEQILSERRYLTGDQLTEADIRLFTTLVRFDPVYVGHFKCNLRRIRDYPNLWGYLRDLYQ-LPG 279 (324)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCeeeccccchHhhhhhhheeEeecceEEeeeecccchhhcCchHHHHHHHHhc-Ccc
Confidence 5566667778888999999999999999999999999999999988877 2 12 6679999999999999 999
Q ss_pred ccc
Q psy13748 284 ISH 286 (296)
Q Consensus 284 ~~~ 286 (296)
|+.
T Consensus 280 ~~~ 282 (324)
T COG0435 280 FAE 282 (324)
T ss_pred ccc
Confidence 998
No 60
>cd03054 GST_N_Metaxin GST_N family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities.
Probab=99.52 E-value=4.7e-14 Score=94.98 Aligned_cols=65 Identities=26% Similarity=0.175 Sum_probs=58.3
Q ss_pred cEEEecC-------CCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEeeCCeeeeecHHHHHHHH
Q psy13748 3 LILHEII-------ASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDGDLIVWDSHAINAYLV 75 (296)
Q Consensus 3 ~~Ly~~~-------~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~~es~~I~~yl~ 75 (296)
+.||.++ .||+|++++++|+++|++|+.+.++.. .+||.|+||+|+++|..++||.+|++||+
T Consensus 1 ~~L~~~~~~~~~~s~sp~~~~v~~~L~~~~i~~~~~~~~~~----------~~~p~g~vP~l~~~g~~l~es~~I~~yL~ 70 (72)
T cd03054 1 LELYQWGRAFGLPSLSPECLKVETYLRMAGIPYEVVFSSNP----------WRSPTGKLPFLELNGEKIADSEKIIEYLK 70 (72)
T ss_pred CEEEEeCCCCCCCCCCHHHHHHHHHHHhCCCceEEEecCCc----------ccCCCcccCEEEECCEEEcCHHHHHHHHh
Confidence 4678777 899999999999999999999988752 17899999999999999999999999998
Q ss_pred Hh
Q psy13748 76 SA 77 (296)
Q Consensus 76 ~~ 77 (296)
++
T Consensus 71 ~~ 72 (72)
T cd03054 71 KK 72 (72)
T ss_pred hC
Confidence 74
No 61
>KOG2903|consensus
Probab=99.51 E-value=4.8e-14 Score=112.89 Aligned_cols=144 Identities=28% Similarity=0.332 Sum_probs=108.6
Q ss_pred CCCccEEEeC---CEEeeccHHHHHHHHHHhCC------CCCCCCCCHHHHHHHHhHHhhccchhhhHHHHhhhhhhccC
Q psy13748 139 QHTVPTLEDG---DLIVWDSHAINAYLVSAYGK------NDALYPKDPKVRALVDQRLHFDSGVLFSALRNIGLKIFFKN 209 (296)
Q Consensus 139 ~~~vP~L~~~---g~~l~es~aI~~yl~~~~~~------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (296)
..+||||+|. ..+--||..|++.+...|.+ .+.+--..+..++++++|.+|.. +.++..+....+..
T Consensus 121 rfTVPVLWD~k~ktIVnNES~eIIr~fNs~f~ef~~~~e~~~lDL~P~~L~~~Ide~N~wvy----~~INNGVYk~GFA~ 196 (319)
T KOG2903|consen 121 RFTVPVLWDLKTKTIVNNESSEIIRMFNSAFDEFNGIAENPVLDLYPSSLRAQIDETNSWVY----DKINNGVYKCGFAE 196 (319)
T ss_pred eEEEEEEEccccceeecCchHHHHHHHhhhhhhhhccccCCccccCCHHHHHHHhhhhceec----ccccCceeeecccc
Confidence 4599999984 45789999999999944422 33443345566888888887754 44455555555555
Q ss_pred CcCCcHHHHHHHHHHHHHHHHHcCCCC--CcCCCcccchhHhHHHHHHHHHhh-----CCC----CCCchhHHHHHHHHh
Q psy13748 210 EKEIPEEDKLRAREALDFAEKFLQGRK--FITGDTYNIADFSIYTTASALVAL-----VPG----LEKYPNLAKYFDLCK 278 (296)
Q Consensus 210 ~~~~~~~~~~~~~~~l~~le~~L~~~~--~l~g~~~t~aD~~~~~~l~~~~~~-----~~~----~~~~p~l~~~~~~~~ 278 (296)
..+.-+.....+-+.|+++|+.|+++. |++|+++|.||+.+++.+.++..+ .+. ...||+|..|.+.+.
T Consensus 197 ~~e~Ye~~V~~lfe~LDr~E~vL~~~~~~f~~G~~LTeaDirLy~TiIRFD~VY~~hFKCn~~~ir~~Yp~l~~~lk~iY 276 (319)
T KOG2903|consen 197 KQEAYEEEVNQLFEALDRCEDVLGKNRKYFLCGDTLTEADIRLYTTIIRFDEVYVQHFKCNKKTIRDEYPNLHNWLKNIY 276 (319)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHhcccceEeeccccchhheeeeeeEEeehhhhheeeecchhhhhccCcHHHHHHHHHH
Confidence 555566777788889999999999866 999999999999999999887766 111 458999999999999
Q ss_pred ccccCccc
Q psy13748 279 SSFKGISH 286 (296)
Q Consensus 279 ~~~p~~~~ 286 (296)
+-.|+|+.
T Consensus 277 ~~~~~~~~ 284 (319)
T KOG2903|consen 277 WNIPGFSS 284 (319)
T ss_pred hhccchhh
Confidence 74677776
No 62
>KOG0868|consensus
Probab=99.47 E-value=1.2e-13 Score=104.58 Aligned_cols=144 Identities=22% Similarity=0.202 Sum_probs=109.8
Q ss_pred hhhhhccCcceEeeccCCCCC--CccccccCCCCCccEEEeCCEEeeccHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhH
Q psy13748 109 ALRNIGVSKTFCSDLYLGWIP--INFSPQLNPQHTVPTLEDGDLIVWDSHAINAYLVSAYGKNDALYPKDPKVRALVDQR 186 (296)
Q Consensus 109 ~~~~~~~~~~~~v~~~~~~~~--~~~~~~~nP~~~vP~L~~~g~~l~es~aI~~yl~~~~~~~~~l~~~~~~~~~~~~~~ 186 (296)
++..|.|+ ...|++-++++. .+| ++.||.++||.|++||.++.||.||+.||+++++ +++|+|.++..|+..++.
T Consensus 25 aLK~iDYe-y~PvnLlk~~~q~~~ef-~~iNPm~kVP~L~i~g~tl~eS~AII~YLeEt~P-~ppLLP~d~~KRA~~r~i 101 (217)
T KOG0868|consen 25 ALKGIDYE-YKPVNLLKEEDQSDSEF-KEINPMEKVPTLVIDGLTLTESLAIIEYLEETYP-DPPLLPKDPHKRAKARAI 101 (217)
T ss_pred HHcCCCcc-eeehhhhcchhhhhhHH-hhcCchhhCCeEEECCEEeehHHHHHHHHHhcCC-CCCCCCcCHHHHHHHHHH
Confidence 45555554 457888887543 788 9999999999999999999999999999999998 588999999999999999
Q ss_pred HhhccchhhhHHHHhhhhhhccCCcCCcHHHHHHHHHHHHHHHHHcCCCCCcC--CCcccchhHhHHHHHHHHHhh
Q psy13748 187 LHFDSGVLFSALRNIGLKIFFKNEKEIPEEDKLRAREALDFAEKFLQGRKFIT--GDTYNIADFSIYTTASALVAL 260 (296)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~--g~~~t~aD~~~~~~l~~~~~~ 260 (296)
.....+.+.+.-+..+..++.....+ .....+.....+.-..|++ -|. ..+++.||-.+++|+.....+
T Consensus 102 ~~~i~sgIQPlQNl~vl~~l~ek~~~---~~~~W~q~~ItkGF~ALEk--lL~~~aGkycvGDevtiADl~L~pqv 172 (217)
T KOG0868|consen 102 SLLIASGIQPLQNLSVLKMLNEKEPG---YGDQWAQHFITKGFTALEK--LLKSHAGKYCVGDEVTIADLCLPPQV 172 (217)
T ss_pred HHHHHhCCCcchhhHHHHHhcccccc---hhhHHHHHHHHHhHHHHHH--HHHHccCCcccCceeehhhhccchhh
Confidence 98887777765444444433222211 2256677777777777776 342 246999999999999876665
No 63
>KOG3027|consensus
Probab=99.47 E-value=9.2e-13 Score=101.99 Aligned_cols=208 Identities=15% Similarity=0.166 Sum_probs=147.8
Q ss_pred CCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEeeCCeeeeecHHHHHHHHHhcCCCCCCCC-C
Q psy13748 9 IASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDGDLIVWDSHAINAYLVSAYGKNDALYP-K 87 (296)
Q Consensus 9 ~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~~es~~I~~yl~~~~~~~~~l~~-~ 87 (296)
+....|..|..+|+.+++||.++-.+- .+| ++|.|+||.|..|.+.++|-.+|+.++..+.- .|-. .
T Consensus 32 ~d~ascLAVqtfLrMcnLPf~v~~~~N-------aef--mSP~G~vPllr~g~~~~aef~pIV~fVeak~~---~l~s~l 99 (257)
T KOG3027|consen 32 PDNASCLAVQTFLRMCNLPFNVRQRAN-------AEF--MSPGGKVPLLRIGKTLFAEFEPIVDFVEAKGV---TLTSWL 99 (257)
T ss_pred ccchhHHHHHHHHHHcCCCceeeecCC-------ccc--cCCCCCCceeeecchhhhhhhHHHHHHHHhcc---chhhhh
Confidence 345678999999999999999877552 333 78999999999999999999999999998763 2322 3
Q ss_pred CHHHHHHHhhhhhccccchhhhhhhhccCcceEeeccCCCCCCccccccCCCCCccEEEeCCEEeeccHHHHHHHHHHhC
Q psy13748 88 DPKVRALVDQRLHFDSGVLFSALRNIGVSKTFCSDLYLGWIPINFSPQLNPQHTVPTLEDGDLIVWDSHAINAYLVSAYG 167 (296)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~nP~~~vP~L~~~g~~l~es~aI~~yl~~~~~ 167 (296)
+..+++.++.+++.+.+.+.-+..++-|.+...++. |-.+..+...-+--..|.+|--+.
T Consensus 100 sE~qkadmra~vslVen~~t~aEl~~s~~de~ty~~------------------vT~~R~gs~ypWPLs~i~~f~Krr-- 159 (257)
T KOG3027|consen 100 SEDQKADMRAYVSLVENLLTTAELYVSWNDEETYDE------------------VTALRYGSVYPWPLSHILPFVKRR-- 159 (257)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHH------------------HhhhccCCCCCCcHHHHHHHHHHH--
Confidence 788999999999999999988877777664433221 000011111112222233332110
Q ss_pred CCCCCCCCCHHHHHHHHhHHhhccchhhhHHHHhhhhhhccCCcCCcHHHHHHHHHHHHHHHHHcCCCCCcCCCcccchh
Q psy13748 168 KNDALYPKDPKVRALVDQRLHFDSGVLFSALRNIGLKIFFKNEKEIPEEDKLRAREALDFAEKFLQGRKFITGDTYNIAD 247 (296)
Q Consensus 168 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~g~~~t~aD 247 (296)
.+...+ ..........+...+.+...++.++..|+..+||.|+.+|-.|
T Consensus 160 --------------~~~r~l-----------------k~~~W~~~~~DqVie~vdkc~~aLsa~L~~q~yf~g~~P~elD 208 (257)
T KOG3027|consen 160 --------------KALREL-----------------KVYDWDDKTMDQVIEQVDKCCRALSAQLGSQPYFTGDQPTELD 208 (257)
T ss_pred --------------HHHHHH-----------------hhcCcccccHHHHHHHHHHHHHHHHHHhcCCCccCCCCccHHH
Confidence 010000 0111222235677788999999999999999999999999999
Q ss_pred HhHHHHHHHHHhhCCC-------CCCchhHHHHHHHHhc
Q psy13748 248 FSIYTTASALVALVPG-------LEKYPNLAKYFDLCKS 279 (296)
Q Consensus 248 ~~~~~~l~~~~~~~~~-------~~~~p~l~~~~~~~~~ 279 (296)
..+++.+..+....+. +..|++|.++.+|+++
T Consensus 209 AlvFGHlytilTt~Lpn~ela~~lkkys~LlefcrrIeq 247 (257)
T KOG3027|consen 209 ALVFGHLYTILTTRLPNMELANILKKYSNLLEFCRRIEQ 247 (257)
T ss_pred HHHHhhhHHhhhhcCCcHHHHHHHHHhHHHHHHHHHHHH
Confidence 9999999988877443 6789999999999987
No 64
>PRK09481 sspA stringent starvation protein A; Provisional
Probab=99.45 E-value=5.1e-13 Score=109.50 Aligned_cols=119 Identities=20% Similarity=0.212 Sum_probs=84.0
Q ss_pred CCCccccccCCCCCccEEEeCCEEeeccHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhHHhhccchhhhHHHHhhhhhhc
Q psy13748 128 IPINFSPQLNPQHTVPTLEDGDLIVWDSHAINAYLVSAYGKNDALYPKDPKVRALVDQRLHFDSGVLFSALRNIGLKIFF 207 (296)
Q Consensus 128 ~~~~~~~~~nP~~~vP~L~~~g~~l~es~aI~~yl~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (296)
.+++| +++||+|+||+|++||.+++||.||++||+++++. +.|+|.++.+++++..|..+..+. +.....
T Consensus 46 ~~~~~-~~~nP~g~VPvL~~~g~~l~ES~AIl~YL~~~~~~-~~l~p~~~~~ra~~~~~~~~~~~~--------~~~~~~ 115 (211)
T PRK09481 46 LPQDL-IDLNPYQSVPTLVDRELTLYESRIIMEYLDERFPH-PPLMPVYPVARGESRLMMHRIEKD--------WYSLMN 115 (211)
T ss_pred CCHHH-HHhCCCCCCCEEEECCEEeeCHHHHHHHHHHhCCC-CCCCCCCHHHHHHHHHHHHHHHHH--------HHHHHH
Confidence 34677 99999999999999999999999999999999974 578999999999999998653321 111111
Q ss_pred cCCcCCcHHHHHHHHHHHHHHHHHcCC-CCCcCCCcccchhHhHHHHHHHHHhh
Q psy13748 208 KNEKEIPEEDKLRAREALDFAEKFLQG-RKFITGDTYNIADFSIYTTASALVAL 260 (296)
Q Consensus 208 ~~~~~~~~~~~~~~~~~l~~le~~L~~-~~~l~g~~~t~aD~~~~~~l~~~~~~ 260 (296)
......+. ........+.+.|+. ..+|.+..+.+||.++++|+..+..+
T Consensus 116 -~~~~~~~~---~~~~~~~~l~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~~ 165 (211)
T PRK09481 116 -KIVNGSAS---EADAARKQLREELLAIAPVFGEKPYFMSEEFSLVDCYLAPLL 165 (211)
T ss_pred -HHhcCCHH---HHHHHHHHHHHHHHHHHHHhccCCcccCCCccHHHHHHHHHH
Confidence 11111122 223333444443332 23777778999999999999877655
No 65
>PRK10542 glutathionine S-transferase; Provisional
Probab=99.43 E-value=9.7e-13 Score=107.00 Aligned_cols=138 Identities=19% Similarity=0.249 Sum_probs=95.2
Q ss_pred hhccCcceEeeccCCC-CC-CccccccCCCCCccEEE-eCCEEeeccHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhHHh
Q psy13748 112 NIGVSKTFCSDLYLGW-IP-INFSPQLNPQHTVPTLE-DGDLIVWDSHAINAYLVSAYGKNDALYPKDPKVRALVDQRLH 188 (296)
Q Consensus 112 ~~~~~~~~~v~~~~~~-~~-~~~~~~~nP~~~vP~L~-~~g~~l~es~aI~~yl~~~~~~~~~l~~~~~~~~~~~~~~~~ 188 (296)
.++|+. ..|++..+. +. ++| .++||.|+||+|+ +||.+++||.||++||++.++..+.+.|.++.+++++.+|..
T Consensus 22 gi~~e~-~~v~~~~~~~~~~~~~-~~~nP~g~vPvL~~~~g~~l~eS~aI~~YL~~~~~~~~l~~p~~~~~ra~~~~~~~ 99 (201)
T PRK10542 22 GLDFTL-VSVDLAKKRLENGDDY-LAINPKGQVPALLLDDGTLLTEGVAIMQYLADSVPDRQLLAPVGSLSRYHTIEWLN 99 (201)
T ss_pred CCCceE-EEeecccccccCChHH-HHhCcCCCCCeEEeCCCcEeecHHHHHHHHHHhCcccccCCCCCcHHHHHHHHHHH
Confidence 455554 356776654 33 677 9999999999998 688999999999999999998655455778899999999998
Q ss_pred hccchhhhHHHHhhhhhhccCCcCCcHHHHHHHHHHHHHHHHHcCCCCCcCCCcccchhHhHHHHHHHHHhh
Q psy13748 189 FDSGVLFSALRNIGLKIFFKNEKEIPEEDKLRAREALDFAEKFLQGRKFITGDTYNIADFSIYTTASALVAL 260 (296)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~g~~~t~aD~~~~~~l~~~~~~ 260 (296)
+..+.+...+. ... .....+...+.....+...-..|+. +|.+..+.+||.++++|+..+..+
T Consensus 100 ~~~~~~~~~~~----~~~---~~~~~~~~~~~~~~~~~~~l~~le~--~L~~~~~l~G~~~s~ADi~l~~~~ 162 (201)
T PRK10542 100 YIATELHKGFT----PLF---RPDTPEEYKPTVRAQLEKKFQYVDE--ALADEQWICGQRFTIADAYLFTVL 162 (201)
T ss_pred HHHhhhhhhhh----hcc---CCCChHHHHHHHHHHHHHHHHHHHH--HhcCCCeeeCCCCcHHhHHHHHHH
Confidence 76554443221 111 1221222223333344444445554 777777889999999999876655
No 66
>cd03196 GST_C_5 GST_C family, unknown subfamily 5; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.38 E-value=4.3e-12 Score=93.55 Aligned_cols=109 Identities=18% Similarity=0.205 Sum_probs=88.2
Q ss_pred CCHHHHHHHHhHHhhccchhhhHHHHhhhhhhccCCcCCcHHHHHHHHHHHHHHHHHcCCCCCcCCCcccchhHhHHHHH
Q psy13748 175 KDPKVRALVDQRLHFDSGVLFSALRNIGLKIFFKNEKEIPEEDKLRAREALDFAEKFLQGRKFITGDTYNIADFSIYTTA 254 (296)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~g~~~t~aD~~~~~~l 254 (296)
.++..+++++.|..+..+.+.+.+........... ...+...+.+.+.+..+|++|++++|++|+++|+||+.+++.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~l~~le~~L~~~~yl~Gd~~tlADi~l~~~l 79 (115)
T cd03196 2 QDPAALKEMLALIAENDNEFKHHLDRYKYADRYPE--ESEEEYRQQAEAFLKDLEARLQQHSYLLGDKPSLADWAIFPFV 79 (115)
T ss_pred CchHHHHHHHHHHHHcchhhHHHHHhccchhhcCc--ccHHHHHHHHHHHHHHHHHHHccCCccCCCCccHHHHHHHHHH
Confidence 47889999999999999888887766544433222 1355667789999999999999889999999999999999887
Q ss_pred HHHHhh---CCCCCCchhHHHHHHHHhccccCccc
Q psy13748 255 SALVAL---VPGLEKYPNLAKYFDLCKSSFKGISH 286 (296)
Q Consensus 255 ~~~~~~---~~~~~~~p~l~~~~~~~~~~~p~~~~ 286 (296)
.++... +.....+|+|.+|++++.+ +|+|++
T Consensus 80 ~~~~~~~~~~~~~~~~P~L~~w~~r~~~-rpa~~~ 113 (115)
T cd03196 80 RQFAHVDPKWFDQSPYPRLRRWLNGFLA-SPLFSK 113 (115)
T ss_pred HHHHHhhhcccCcccCHHHHHHHHHHHc-ChHHHh
Confidence 665543 2235889999999999999 999986
No 67
>cd03177 GST_C_Delta_Epsilon GST_C family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites th
Probab=99.37 E-value=2.7e-12 Score=95.22 Aligned_cols=111 Identities=42% Similarity=0.685 Sum_probs=88.2
Q ss_pred HHHHHHhHHhhccchhhhHHHHhhhhhhccCCcCCcHHHHHHHHHHHHHHHHHcCCCCCcCCCcccchhHhHHHHHHHHH
Q psy13748 179 VRALVDQRLHFDSGVLFSALRNIGLKIFFKNEKEIPEEDKLRAREALDFAEKFLQGRKFITGDTYNIADFSIYTTASALV 258 (296)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~g~~~t~aD~~~~~~l~~~~ 258 (296)
+++++.+|+.+..+.+.......+....... ....+...+.+.+.+..+++.|++++|++|+++|++|+++++.+.++.
T Consensus 2 ~~a~~~~wl~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~s~aDi~l~~~~~~~~ 80 (118)
T cd03177 2 KRAIVNQRLHFDSGTLYQRLRDYYYPILFGG-AEPPEEKLDKLEEALDFLETFLEGSDYVAGDQLTIADLSLVATVSTLE 80 (118)
T ss_pred hHHHHHHHHHhhhchHHHHHHHHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHccCCeeCCCCcCHHHHHHHHHHHHHH
Confidence 5788999999888777776655444433222 244667778899999999999988899999999999999999998876
Q ss_pred h-hCCCCCCchhHHHHHHHHhccccCccc-CCCCC
Q psy13748 259 A-LVPGLEKYPNLAKYFDLCKSSFKGISH-DEEGP 291 (296)
Q Consensus 259 ~-~~~~~~~~p~l~~~~~~~~~~~p~~~~-~~~~~ 291 (296)
. .++....+|+|.+|++++.+ +|++++ ..+|+
T Consensus 81 ~~~~~~~~~~p~l~~w~~~~~~-~p~~~~~~~~~~ 114 (118)
T cd03177 81 ALLPLDLSKYPNVRAWLERLKA-LPPYEEANGKGA 114 (118)
T ss_pred HhcCCChhhCchHHHHHHHHHc-ccchHHHHHHHH
Confidence 5 45556779999999999999 999998 44443
No 68
>TIGR01262 maiA maleylacetoacetate isomerase. Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism.
Probab=99.37 E-value=4.2e-12 Score=103.99 Aligned_cols=128 Identities=21% Similarity=0.212 Sum_probs=87.9
Q ss_pred CCccccccCCCCCccEEEeCCEEeeccHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhHHhhccchhhhHHHHhhhhhhcc
Q psy13748 129 PINFSPQLNPQHTVPTLEDGDLIVWDSHAINAYLVSAYGKNDALYPKDPKVRALVDQRLHFDSGVLFSALRNIGLKIFFK 208 (296)
Q Consensus 129 ~~~~~~~~nP~~~vP~L~~~g~~l~es~aI~~yl~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (296)
++++ .+.||.|+||+|++||.+++||.||++||++.++. +.|.|.++.+++++.+|..+....+.......+......
T Consensus 40 ~~~~-~~~nP~g~vP~L~~~g~~l~ES~aI~~yl~~~~~~-~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (210)
T TIGR01262 40 SPEF-LALNPQGLVPTLDIDGEVLTQSLAIIEYLEETYPD-PPLLPADPIKRARVRALALLIACDIHPLNNLRVLQYLRE 117 (210)
T ss_pred Chhh-hhcCCCCcCCEEEECCEEeecHHHHHHHHHHhCCC-CCCCCCCHHHHHHHHHHHHHHhcccChhhhhhHHHHHHh
Confidence 4677 99999999999999999999999999999999975 458899999999999998876544443222111111111
Q ss_pred CCcCCcHHH-HHHHHHHHHHHHHHcCCCCCcCCC--cccchhHhHHHHHHHHHhhC
Q psy13748 209 NEKEIPEED-KLRAREALDFAEKFLQGRKFITGD--TYNIADFSIYTTASALVALV 261 (296)
Q Consensus 209 ~~~~~~~~~-~~~~~~~l~~le~~L~~~~~l~g~--~~t~aD~~~~~~l~~~~~~~ 261 (296)
.....+.. .+...+.+...-..|++ .|.+. .+.+||-++++|+..+..+.
T Consensus 118 -~~~~~~~~~~~~~~~~~~~~l~~le~--~L~~~~~~~l~G~~~T~ADi~~~~~l~ 170 (210)
T TIGR01262 118 -KLGVEEEARNRWYQHWISKGFAALEA--LLQPHAGAFCVGDTPTLADLCLVPQVY 170 (210)
T ss_pred -hcCCCHHHHHHHHHHHHHHHHHHHHH--HHhcCCCCEeeCCCCCHHHHHHHHHHH
Confidence 11111221 22223333344445554 67653 48899999999999887763
No 69
>cd03189 GST_C_GTT1_like GST_C family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endopl
Probab=99.33 E-value=1.4e-11 Score=91.44 Aligned_cols=108 Identities=28% Similarity=0.303 Sum_probs=82.4
Q ss_pred CCCHHHHHHHHhHHhhccchhhhHHHHhhhhhhccCC----------cCCcHHHHHHHHHHHHHHHHHcCCCCCcCCCcc
Q psy13748 174 PKDPKVRALVDQRLHFDSGVLFSALRNIGLKIFFKNE----------KEIPEEDKLRAREALDFAEKFLQGRKFITGDTY 243 (296)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~l~~le~~L~~~~~l~g~~~ 243 (296)
|.++.+++++.+|..+..+.+.+.+............ ....+.....+.+.+..+|+.|++++|++|+++
T Consensus 2 ~~~~~~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~Gd~~ 81 (119)
T cd03189 2 PPDTAEYADYLYWLHFAEGSLMPPLLLKLVLSRIGSAPPPIANKIADKVLAGFINPELKKHLDFLEDRLAKKGYFVGDKL 81 (119)
T ss_pred CCCHHHHHHHHHHHHHHhHhhhHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHhHHHHHHHHHHHHHHccCCCCCCCCC
Confidence 4688999999999999888888765433222111110 111223445788889999999998999999999
Q ss_pred cchhHhHHHHHHHHHhhCCCCCCchhHHHHHHHHhcccc
Q psy13748 244 NIADFSIYTTASALVALVPGLEKYPNLAKYFDLCKSSFK 282 (296)
Q Consensus 244 t~aD~~~~~~l~~~~~~~~~~~~~p~l~~~~~~~~~~~p 282 (296)
|+||+.+++.+.+....+.....+|++.+|++++.+ +|
T Consensus 82 t~ADi~l~~~~~~~~~~~~~~~~~p~l~~w~~~~~~-~p 119 (119)
T cd03189 82 TAADIMMSFPLEAALARGPLLEKYPNIAAYLERIEA-RP 119 (119)
T ss_pred CHHHHHHHHHHHHHHHcCcccccCchHHHHHHHHhc-CC
Confidence 999999998888776655457889999999999998 76
No 70
>cd03188 GST_C_Beta GST_C family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site for
Probab=99.31 E-value=4.4e-12 Score=93.29 Aligned_cols=107 Identities=21% Similarity=0.315 Sum_probs=82.0
Q ss_pred HHHHHHhHHhhccchhhhHHHHhhhhhhccCC----cCCcHHHHHHHHHHHHHHHHHcCCCCCcCCCcccchhHhHHHHH
Q psy13748 179 VRALVDQRLHFDSGVLFSALRNIGLKIFFKNE----KEIPEEDKLRAREALDFAEKFLQGRKFITGDTYNIADFSIYTTA 254 (296)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~le~~L~~~~~l~g~~~t~aD~~~~~~l 254 (296)
+|+++.+|..+..+.+.+.+...+........ +...+...+.+.+.++.+|+.|++++|++|+++|+||+.+++.+
T Consensus 2 ~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~t~aDi~~~~~~ 81 (114)
T cd03188 2 ERARLLEWLNFLSSELHKAFGPLFYPARWATDEAAQEEVKAAARERLAARLAYLDAQLAGGPYLLGDRFSVADAYLFVVL 81 (114)
T ss_pred cHHHHHHHHHHHhhhhchhhhhcccccccccChhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeeeCCCcchHHHHHHHHH
Confidence 47889999999888887766444333221110 11123445678889999999999889999999999999999998
Q ss_pred HHHHhhCCCCCCchhHHHHHHHHhccccCccc
Q psy13748 255 SALVALVPGLEKYPNLAKYFDLCKSSFKGISH 286 (296)
Q Consensus 255 ~~~~~~~~~~~~~p~l~~~~~~~~~~~p~~~~ 286 (296)
.++...+.....+|++.+|++++.+ +|++++
T Consensus 82 ~~~~~~~~~~~~~p~l~~w~~~~~~-~p~~k~ 112 (114)
T cd03188 82 RWAPGVGLDLSDWPNLAAYLARVAA-RPAVQA 112 (114)
T ss_pred HHHhhcCCChhhChHHHHHHHHHHh-CHHhHh
Confidence 8776555556789999999999999 999986
No 71
>cd03186 GST_C_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=99.30 E-value=1.3e-11 Score=89.85 Aligned_cols=103 Identities=16% Similarity=0.162 Sum_probs=81.2
Q ss_pred HHHHHHHhHHhhccchhhhHHHHhhhhhhccCCcCCcHHHHHHHHHHHHHHHHHcCCCCCcCCCcccchhHhHHHHHHHH
Q psy13748 178 KVRALVDQRLHFDSGVLFSALRNIGLKIFFKNEKEIPEEDKLRAREALDFAEKFLQGRKFITGDTYNIADFSIYTTASAL 257 (296)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~g~~~t~aD~~~~~~l~~~ 257 (296)
.+|+++..|..+..+.+.+.+...+.. .....+...+.+.+.+..+++.|++++|++|+++|++|+.+++.+...
T Consensus 2 ~~ra~~r~w~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~~~~~ 76 (107)
T cd03186 2 VARARSRLLMHRIEQDWYPLVDTIEKG-----RKKEAEKARKELRESLLALAPVFAHKPYFMSEEFSLVDCALAPLLWRL 76 (107)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhC-----cHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCcHHHHHHHHHHHHH
Confidence 468899999999887776665433321 122244566778899999999999899999999999999999998665
Q ss_pred HhhCCCC-CCchhHHHHHHHHhccccCccc
Q psy13748 258 VALVPGL-EKYPNLAKYFDLCKSSFKGISH 286 (296)
Q Consensus 258 ~~~~~~~-~~~p~l~~~~~~~~~~~p~~~~ 286 (296)
...+..+ ..+|++.+|++++.+ +|++++
T Consensus 77 ~~~~~~~~~~~p~l~~w~~~~~~-rpa~~~ 105 (107)
T cd03186 77 PALGIELPKQAKPLKDYMERVFA-RDSFQK 105 (107)
T ss_pred HHcCCCCcccchHHHHHHHHHHC-CHHHHH
Confidence 5456543 579999999999999 999876
No 72
>cd03079 GST_N_Metaxin2 GST_N family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=99.29 E-value=9.3e-12 Score=82.89 Aligned_cols=60 Identities=18% Similarity=0.181 Sum_probs=50.0
Q ss_pred CCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEeeCCeeeeecHHHHHHHHHh
Q psy13748 9 IASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDGDLIVWDSHAINAYLVSA 77 (296)
Q Consensus 9 ~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~~es~~I~~yl~~~ 77 (296)
+.+++|.|++++|++.|++|+.+.. ..+ ...+|.|+||+|++||.+|+||.+|+.||+++
T Consensus 15 ~~~~~~~kv~~~L~elglpye~~~~--~~~-------~~~~P~GkVP~L~~dg~vI~eS~aIl~yL~~~ 74 (74)
T cd03079 15 PDNASCLAVQTFLKMCNLPFNVRCR--ANA-------EFMSPSGKVPFIRVGNQIVSEFGPIVQFVEAK 74 (74)
T ss_pred CCCCCHHHHHHHHHHcCCCcEEEec--CCc-------cccCCCCcccEEEECCEEEeCHHHHHHHHhcC
Confidence 4678899999999999999998732 111 12678899999999999999999999999863
No 73
>cd03180 GST_C_2 GST_C family, unknown subfamily 2; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.28 E-value=5.3e-11 Score=86.89 Aligned_cols=105 Identities=16% Similarity=0.252 Sum_probs=80.3
Q ss_pred HHHHHHhHHhhccchhhhHHHHhhhhhhccCCc----CCcHHHHHHHHHHHHHHHHHcCCCCCcCCCcccchhHhHHHHH
Q psy13748 179 VRALVDQRLHFDSGVLFSALRNIGLKIFFKNEK----EIPEEDKLRAREALDFAEKFLQGRKFITGDTYNIADFSIYTTA 254 (296)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~le~~L~~~~~l~g~~~t~aD~~~~~~l 254 (296)
+|+++.+|+.+..+.+.+.+...+......... ...+...+.+.+.++.+|+.|++++|++|+++|+||+.+++.+
T Consensus 2 ~ra~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lE~~L~~~~~l~g~~~t~aDi~~~~~~ 81 (110)
T cd03180 2 ARARADRWMDWQTSTLNPAFRYAFWGLVRTPPEQRDPAAIAASLAAWAKLMAILDAQLAGRPYLAGDRFTLADIPLGCSA 81 (110)
T ss_pred chhHHHHHHHHHHhhcChHHHHHHHHHHcCCcccCCHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCCCHHHHHHHHHH
Confidence 478899999988888887766554433222111 1223456688999999999999889999999999999999888
Q ss_pred HHHHhhCCCCCCchhHHHHHHHHhccccCc
Q psy13748 255 SALVALVPGLEKYPNLAKYFDLCKSSFKGI 284 (296)
Q Consensus 255 ~~~~~~~~~~~~~p~l~~~~~~~~~~~p~~ 284 (296)
......+.....+|+|.+|++++.+ +|+|
T Consensus 82 ~~~~~~~~~~~~~p~l~~~~~~~~~-~p~~ 110 (110)
T cd03180 82 YRWFELPIERPPLPHLERWYARLRA-RPAF 110 (110)
T ss_pred HHHHHcccccccCchHHHHHHHHHh-CCCC
Confidence 5444444446889999999999999 9985
No 74
>cd03182 GST_C_GTT2_like GST_C family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensiti
Probab=99.26 E-value=4.3e-11 Score=88.50 Aligned_cols=108 Identities=18% Similarity=0.203 Sum_probs=83.2
Q ss_pred CHHHHHHHHhHHhhccchhhhHHHHhhhhhhcc-C-------CcCCcHHHHHHHHHHHHHHHHHcCCCCCcCCCcccchh
Q psy13748 176 DPKVRALVDQRLHFDSGVLFSALRNIGLKIFFK-N-------EKEIPEEDKLRAREALDFAEKFLQGRKFITGDTYNIAD 247 (296)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------~~~~~~~~~~~~~~~l~~le~~L~~~~~l~g~~~t~aD 247 (296)
++.+++++.+|..+..+.+.+.+...+...... . .....+.....+.+.+..+|+.|++++|+.|+++|++|
T Consensus 1 d~~~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~l~gd~~t~aD 80 (117)
T cd03182 1 TPLERAQIEMWQRRAELQGLYPIGQAFRHATPGLKPPDREEQVPEWGERSKARAADFLAYLDTRLAGSPYVAGDRFTIAD 80 (117)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCccccccCHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHH
Confidence 467899999999998777776655444332111 1 11223455677889999999999888899999999999
Q ss_pred HhHHHHHHHHHhhCCCC-CCchhHHHHHHHHhccccCc
Q psy13748 248 FSIYTTASALVALVPGL-EKYPNLAKYFDLCKSSFKGI 284 (296)
Q Consensus 248 ~~~~~~l~~~~~~~~~~-~~~p~l~~~~~~~~~~~p~~ 284 (296)
+.+++.+.+....+.++ ..+|++.+|++++.+ +|++
T Consensus 81 i~l~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~-~p~~ 117 (117)
T cd03182 81 ITAFVGLDFAKVVKLRVPEELTHLRAWYDRMAA-RPSA 117 (117)
T ss_pred HHHHHHhHHHHhcCCCCccccHHHHHHHHHHHh-ccCC
Confidence 99999998776666654 589999999999999 9974
No 75
>cd03191 GST_C_Zeta GST_C family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates, but display modest GSH peroxidase activity. They are also implicated in the detoxification of th
Probab=99.25 E-value=1.3e-11 Score=91.95 Aligned_cols=111 Identities=19% Similarity=0.169 Sum_probs=80.8
Q ss_pred HHHHHHHhHHhhccchhhhHHHHhhhhhhcc--C--CcCCcHHHHHHHHHHHHHHHHHcC--CCCCcCCCcccchhHhHH
Q psy13748 178 KVRALVDQRLHFDSGVLFSALRNIGLKIFFK--N--EKEIPEEDKLRAREALDFAEKFLQ--GRKFITGDTYNIADFSIY 251 (296)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~l~~le~~L~--~~~~l~g~~~t~aD~~~~ 251 (296)
.+++++++|..+..+.+.+.+...+...... . .....+...+.+.+.+..+|+.|+ .++||+|+++|+||++++
T Consensus 2 ~~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~ 81 (121)
T cd03191 2 KKRARVRALALIIACDIHPLNNLRVLKYLTEELGLDEEAKNAWYRHWIARGFAALEKLLAQTAGKFCFGDEPTLADICLV 81 (121)
T ss_pred hhHHHHHHHHHHHHccCCccccHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeecCCcCCHHHHHHH
Confidence 4689999999998877765432222111111 1 111112233567888999999997 347999999999999999
Q ss_pred HHHHHHHhhCCCCCCchhHHHHHHHHhccccCcccCCC
Q psy13748 252 TTASALVALVPGLEKYPNLAKYFDLCKSSFKGISHDEE 289 (296)
Q Consensus 252 ~~l~~~~~~~~~~~~~p~l~~~~~~~~~~~p~~~~~~~ 289 (296)
+.+.+....++.+..+|+|.+|++++.+ +|+|++..+
T Consensus 82 ~~~~~~~~~~~~~~~~p~l~~w~~~~~~-~p~~~~~~~ 118 (121)
T cd03191 82 PQVYNARRFGVDLSPYPTIARINEACLE-LPAFQAAHP 118 (121)
T ss_pred HHHHHHHHhCCCcccCcHHHHHHHHHHh-ChhHHHhCc
Confidence 9988766666656889999999999999 999998543
No 76
>cd03178 GST_C_Ure2p_like GST_C family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The N-terminal thioredoxin-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of GSH with a wide range of en
Probab=99.25 E-value=1.5e-11 Score=90.38 Aligned_cols=108 Identities=24% Similarity=0.314 Sum_probs=82.9
Q ss_pred HHHHHHhHHhhccchhhhHHHHhhhhhhccC--CcCCcHHHHHHHHHHHHHHHHHcCCCCCcCCCcccchhHhHHHHHHH
Q psy13748 179 VRALVDQRLHFDSGVLFSALRNIGLKIFFKN--EKEIPEEDKLRAREALDFAEKFLQGRKFITGDTYNIADFSIYTTASA 256 (296)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~le~~L~~~~~l~g~~~t~aD~~~~~~l~~ 256 (296)
+++++.+|+.+.++.+.+.+...+....... .+...+...+.+.+.++.+|+.|++++|++|+++|+||+++++.+.+
T Consensus 1 ~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~l~~~~~~ 80 (113)
T cd03178 1 ERYEVLQWLFFQMGGLGPMFGQAGHFSRYAPEKIPYAIERYTNEAKRLYGVLDKRLAGRDYLAGDEYSIADIAIFPWVRR 80 (113)
T ss_pred ChHHHHHHHHHHHccCCCcchHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHHHHccCCcccCCCCCeeeeeHHHHHHH
Confidence 3678899999988888776544322221111 12223445677888999999999988999999999999999998888
Q ss_pred HHhhCCC-CCCchhHHHHHHHHhccccCcccC
Q psy13748 257 LVALVPG-LEKYPNLAKYFDLCKSSFKGISHD 287 (296)
Q Consensus 257 ~~~~~~~-~~~~p~l~~~~~~~~~~~p~~~~~ 287 (296)
....+.. ...+|++.+|++++.+ +|+++++
T Consensus 81 ~~~~~~~~~~~~p~l~~w~~~~~~-~p~~~~~ 111 (113)
T cd03178 81 LEWIGIDDLDDFPNVKRWLDRIAA-RPAVQRG 111 (113)
T ss_pred HHhccccchhhchHHHHHHHHHhh-CHHHHHh
Confidence 7666554 6789999999999999 9999873
No 77
>cd03190 GST_C_ECM4_like GST_C family, ECM4-like subfamily; composed of predominantly uncharacterized and taxonomically diverse proteins with similarity to the translation product of the Saccharomyces cerevisiae gene ECM4. ECM4, a gene of unknown function, is involved in cell surface biosynthesis and architecture. S. cerevisiae ECM4 mutants show increased amounts of the cell wall hexose, N-acetylglucosamine. More recently, global gene expression analysis shows that ECM4 is upregulated during genotoxic conditions and together with the expression profiles of 18 other genes could potentially differentiate between genotoxic and cytotoxic insults in yeast.
Probab=99.20 E-value=5.9e-11 Score=90.87 Aligned_cols=104 Identities=24% Similarity=0.327 Sum_probs=80.0
Q ss_pred HHHHHHHhHHhhccchhhhHHHHhhhhhhccCCcCCcHHHHHHHHHHHHHHHHHcCCCCCcCCCcccchhHhHHHHHHHH
Q psy13748 178 KVRALVDQRLHFDSGVLFSALRNIGLKIFFKNEKEIPEEDKLRAREALDFAEKFLQGRKFITGDTYNIADFSIYTTASAL 257 (296)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~g~~~t~aD~~~~~~l~~~ 257 (296)
+.|+++++|.+|....+.+.+.. ..........+...+.+.+.++.+|++|++++|++|+++|+||+++++.+.++
T Consensus 3 ~~~a~i~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~l~~LE~~L~~~~yl~Gd~~TlADi~l~~~l~~~ 78 (142)
T cd03190 3 ELRSEIDELNEWIYDNINNGVYK----AGFATTQEAYDEAVDELFEALDRLEELLSDRRYLLGDRLTEADIRLFTTLIRF 78 (142)
T ss_pred hHHHHHHHHHHHHHHHHhhHHHH----HhhccCHHHHHHHHHHHHHHHHHHHHHHccCCeeeCCCccHHHHHHHHHHHHH
Confidence 46888999999988777655432 11122233344566788999999999999889999999999999999998765
Q ss_pred Hhh-------CC-CCCCchhHHHHHHHHhccccCccc
Q psy13748 258 VAL-------VP-GLEKYPNLAKYFDLCKSSFKGISH 286 (296)
Q Consensus 258 ~~~-------~~-~~~~~p~l~~~~~~~~~~~p~~~~ 286 (296)
..+ +. .+..||+|.+|++++.+ +|++++
T Consensus 79 ~~~~~~~~~~~~~~~~~~P~L~~w~~r~~~-~P~~k~ 114 (142)
T cd03190 79 DAVYVQHFKCNLKRIRDYPNLWNYLRRLYQ-NPGVAE 114 (142)
T ss_pred HHHhhhhcccccchhhhCchHHHHHHHHhc-CchHhh
Confidence 432 11 14689999999999999 999998
No 78
>KOG0406|consensus
Probab=99.20 E-value=7.6e-11 Score=95.09 Aligned_cols=119 Identities=18% Similarity=0.152 Sum_probs=86.5
Q ss_pred CCccccccC-CCCCccEEEeCCEEeeccHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhHHhhccchhhhHHHHhhhhhhc
Q psy13748 129 PINFSPQLN-PQHTVPTLEDGDLIVWDSHAINAYLVSAYGKNDALYPKDPKVRALVDQRLHFDSGVLFSALRNIGLKIFF 207 (296)
Q Consensus 129 ~~~~~~~~n-P~~~vP~L~~~g~~l~es~aI~~yl~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (296)
+|++++..| +.++||||+++|..++||..|++||++.++.+++++|+|+.+|++.+.|.++....+.. ...
T Consensus 45 Ks~~ll~~np~hkKVPvL~Hn~k~i~ESliiveYiDe~w~~~~~iLP~DPy~Ra~arfwa~~id~~~~~-------~~~- 116 (231)
T KOG0406|consen 45 KSEWLLEKNPVHKKVPVLEHNGKPICESLIIVEYIDETWPSGPPILPSDPYERAQARFWAEYIDKKVFF-------VGR- 116 (231)
T ss_pred CCHHHHHhccccccCCEEEECCceehhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHhHHHH-------HHH-
Confidence 788889999 78899999999999999999999999999988999999999999999999876643321 111
Q ss_pred cCCcCCcHHHHHHHHHHHHHHHHHcCCCCCcC-CCcccchhHhHHHHHHHH
Q psy13748 208 KNEKEIPEEDKLRAREALDFAEKFLQGRKFIT-GDTYNIADFSIYTTASAL 257 (296)
Q Consensus 208 ~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~-g~~~t~aD~~~~~~l~~~ 257 (296)
........+..+...+.+...-..|+. -|. |+.+-.||...+.|+...
T Consensus 117 ~~~~~~~~e~~~~~~~e~~e~l~~lE~--el~k~k~~fgG~~~G~vDi~~~ 165 (231)
T KOG0406|consen 117 FVVAAKGGEEQEAAKEELREALKVLEE--ELGKGKDFFGGETIGFVDIAIG 165 (231)
T ss_pred HHHhhcCchHHHHHHHHHHHHHHHHHH--HHhcCCCCCCCCCcCHhhhhHH
Confidence 000111213333333344444455654 355 677777888888888654
No 79
>cd03185 GST_C_Tau GST_C family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropi
Probab=99.19 E-value=1.1e-10 Score=87.42 Aligned_cols=106 Identities=26% Similarity=0.222 Sum_probs=82.3
Q ss_pred HHHHHHHhHHhhccchhhhHHHHhhhhhhccCCcCCcHHHHHHHHHHHHHHHHHcCCCCCcCCCcccchhHhHHHHHHHH
Q psy13748 178 KVRALVDQRLHFDSGVLFSALRNIGLKIFFKNEKEIPEEDKLRAREALDFAEKFLQGRKFITGDTYNIADFSIYTTASAL 257 (296)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~g~~~t~aD~~~~~~l~~~ 257 (296)
.+|+++..|..+..+.+.+.+...+.. .....+...+.+.+.++.+++.|++++|++|+++|+||+.+++.+.++
T Consensus 2 ~~ra~~~~w~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~ADi~l~~~~~~~ 76 (126)
T cd03185 2 YERAVARFWAAFIDDKLFPAGRKVLAA-----KGEEREKAKEEALEALKVLEEELGGKPFFGGDTIGYVDIALGSFLGWF 76 (126)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHcc-----chHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHHH
Confidence 468889999998887777665443321 122344566788899999999999889999999999999999988776
Q ss_pred Hhh----CCC---CCCchhHHHHHHHHhccccCcccCCC
Q psy13748 258 VAL----VPG---LEKYPNLAKYFDLCKSSFKGISHDEE 289 (296)
Q Consensus 258 ~~~----~~~---~~~~p~l~~~~~~~~~~~p~~~~~~~ 289 (296)
... +.. ...+|++.+|++++++ +|++++..+
T Consensus 77 ~~~~~~~~~~~~~~~~~p~l~~w~~~~~~-~p~~~~~~~ 114 (126)
T cd03185 77 RAYEEVGGVKLLDEEKTPLLAAWAERFLE-LEAVKEVLP 114 (126)
T ss_pred HHHHHHcCccccCcccCchHHHHHHHHHh-ccHHHHhCC
Confidence 432 322 4678999999999999 999998443
No 80
>cd03187 GST_C_Phi GST_C family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes a
Probab=99.16 E-value=1.1e-10 Score=86.37 Aligned_cols=107 Identities=21% Similarity=0.348 Sum_probs=78.2
Q ss_pred HHHHHHhHHhhccchhhhHHHHhhhhhhcc----C--CcCCcHHHHHHHHHHHHHHHHHcCCCCCcCCCcccchhHhHHH
Q psy13748 179 VRALVDQRLHFDSGVLFSALRNIGLKIFFK----N--EKEIPEEDKLRAREALDFAEKFLQGRKFITGDTYNIADFSIYT 252 (296)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~--~~~~~~~~~~~~~~~l~~le~~L~~~~~l~g~~~t~aD~~~~~ 252 (296)
+|+++.+|..+..+.+.+............ . .....+...+.+.+.+..+|++|++++|++|+++|+||+.+++
T Consensus 2 ~ra~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~l~~ 81 (118)
T cd03187 2 ERAIVEQWLEVESHQFDPPASALAFELVFKPMLGLPTDEAVVEENEEKLKKVLDVYEARLSKSKYLAGDSFTLADLSHLP 81 (118)
T ss_pred chHHHHHHHHHHHhhcchhHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHHcccCcccCCCCccHHHHHHHH
Confidence 578889999988777766554322111111 1 1112234456788899999999998899999999999999998
Q ss_pred HHHHHHhhCC--CCCCchhHHHHHHHHhccccCccc
Q psy13748 253 TASALVALVP--GLEKYPNLAKYFDLCKSSFKGISH 286 (296)
Q Consensus 253 ~l~~~~~~~~--~~~~~p~l~~~~~~~~~~~p~~~~ 286 (296)
.+.++...+. ....+|++.+|++++.+ +|++++
T Consensus 82 ~~~~~~~~~~~~~~~~~p~l~~~~~~~~~-~p~~~~ 116 (118)
T cd03187 82 YLQYLMATPFAKLFDSRPHVKAWWEDISA-RPAWKK 116 (118)
T ss_pred HHHHHHHccchhhhhcCchHHHHHHHHHh-CHHHHh
Confidence 8877654322 25679999999999999 999875
No 81
>cd03198 GST_C_CLIC GST_C family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin, and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division, and apoptosis. They can exist in both water-soluble and membrane-bound states and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and adopts a fold similar to GSTs, containing an N-terminal domain with a thioredoxin fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. T
Probab=99.13 E-value=3e-10 Score=85.01 Aligned_cols=79 Identities=16% Similarity=0.261 Sum_probs=65.7
Q ss_pred CCcCCcHHHHHHHHHHHHHHHHHcCC----------------CCCcCCCcccchhHhHHHHHHHHHhh-----CCCC-CC
Q psy13748 209 NEKEIPEEDKLRAREALDFAEKFLQG----------------RKFITGDTYNIADFSIYTTASALVAL-----VPGL-EK 266 (296)
Q Consensus 209 ~~~~~~~~~~~~~~~~l~~le~~L~~----------------~~~l~g~~~t~aD~~~~~~l~~~~~~-----~~~~-~~ 266 (296)
...+..+...+.+...|+.++.+|.+ ++||+|+++|+||+.+++.+.++..+ ++.. ..
T Consensus 22 ~~~~~~e~~~~~l~~~L~~ld~~L~~~~~~~~~~~~~~~~~~~~fL~Gd~fTlADi~l~p~L~~~~~~~~~~~g~~i~~~ 101 (134)
T cd03198 22 SNPALNENLEKGLLKALKKLDDYLNSPLPDEIDSAEDEGVSQRKFLDGDELTLADCNLLPKLHIVKVVAKKYRNFEIPAD 101 (134)
T ss_pred CChhhhHHHHHHHHHHHHHHHHHHccCccccccccccccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcccc
Confidence 33444667778899999999999986 67999999999999999998766432 5553 78
Q ss_pred chhHHHHHHHHhccccCcccCC
Q psy13748 267 YPNLAKYFDLCKSSFKGISHDE 288 (296)
Q Consensus 267 ~p~l~~~~~~~~~~~p~~~~~~ 288 (296)
+|+|.+|++++.+ ||+|++..
T Consensus 102 ~P~L~aw~~ri~a-RPsfk~t~ 122 (134)
T cd03198 102 LTGLWRYLKNAYQ-REEFTNTC 122 (134)
T ss_pred CHHHHHHHHHHHC-CHHHHHHc
Confidence 9999999999999 99999843
No 82
>cd03200 GST_C_JTV1 GST_C family, JTV-1 subfamily; composed of uncharacterized proteins with similarity to the translation product of the human JTV-1 gene. Human JTV-1, a gene of unknown function, initiates within the human PMS2 gene promoter, but is transcribed from the opposite strand. PMS2 encodes a protein involved in DNA mismatch repair and is mutated in a subset of patients with hereditary nonpolyposis colon cancer. It is unknown whether the expression of JTV-1 affects that of PMS2, or vice versa, as a result of their juxtaposition. JTV-1 is up-regulated while PMS2 is down-regulated in tumor cell spheroids that show increased resistance to anticancer cytotoxic drugs compared with tumor cell monolayers indicating that suppressed DNA mismatch repair may be a mechanism for multicellular resistance to alkylating agents.
Probab=99.11 E-value=4.2e-10 Score=79.96 Aligned_cols=95 Identities=15% Similarity=0.227 Sum_probs=73.8
Q ss_pred HHHHHHHhCCCCCCCCCCHHHHHHHHhHHhhccchhhhHHHHhhhhhhccCCcCCcHHHHHHHHHHHHHHHHHcCCCCCc
Q psy13748 159 NAYLVSAYGKNDALYPKDPKVRALVDQRLHFDSGVLFSALRNIGLKIFFKNEKEIPEEDKLRAREALDFAEKFLQGRKFI 238 (296)
Q Consensus 159 ~~yl~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l 238 (296)
+||+++.-+ |.|.++.+++++++|++.....+. ....+.+.+.+..++++|++++|+
T Consensus 1 ~r~~~~~~~----~~~~~~~~~~~vd~~~d~~~~~l~-------------------~~~~~~~~~~l~~le~~L~~~~fl 57 (96)
T cd03200 1 ARFLYRLLG----PAPNAPNAATNIDSWVDTAIFQLA-------------------EGSSKEKAAVLRALNSALGRSPWL 57 (96)
T ss_pred CchHHHHhc----ccCCCchHHHHHHHHHHHHHHHHh-------------------cCCHHHHHHHHHHHHHHHcCCCcc
Confidence 478888833 889999999999999985321111 012345667888999999999999
Q ss_pred CCCcccchhHhHHHHHHHHHhhCCCCCCchhHHHHHHHHhc
Q psy13748 239 TGDTYNIADFSIYTTASALVALVPGLEKYPNLAKYFDLCKS 279 (296)
Q Consensus 239 ~g~~~t~aD~~~~~~l~~~~~~~~~~~~~p~l~~~~~~~~~ 279 (296)
+|+++|+||+++++.+... +.....+|++.+|++++.+
T Consensus 58 ~Gd~~tiADi~l~~~l~~~---~~~~~~~p~l~~w~~r~~~ 95 (96)
T cd03200 58 VGSEFTVADIVSWCALLQT---GLASAAPANVQRWLKSCEN 95 (96)
T ss_pred CCCCCCHHHHHHHHHHHHc---ccccccChHHHHHHHHHHh
Confidence 9999999999999887642 4445689999999999985
No 83
>cd03203 GST_C_Lambda GST_C family, Class Lambda subfamily; composed of plant-specific class Lambda GSTs. GSTs are cytosolic, usually dimeric, proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Lambda subfamily was recently discovered, together with dehydroascorbate reductases (DHARs), as two outlying groups of the GST superfamily in Arabidopsis thaliana, which contain conserved active site cysteines. Characterization of recombinant A. thaliana proteins show that Lambda class GSTs are monomeric, similar
Probab=99.10 E-value=9.2e-10 Score=81.75 Aligned_cols=101 Identities=21% Similarity=0.371 Sum_probs=71.3
Q ss_pred CHHHHHHHHhHHhhccchhhhHHHHhhhhhhccCCcCCcHHHHHHHHHHHHHHHHHcC---CCCCcCCCcccchhHhHHH
Q psy13748 176 DPKVRALVDQRLHFDSGVLFSALRNIGLKIFFKNEKEIPEEDKLRAREALDFAEKFLQ---GRKFITGDTYNIADFSIYT 252 (296)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~---~~~~l~g~~~t~aD~~~~~ 252 (296)
|+.+|+.+++|+.+. ..+...+......+.. .+.+.+.++.+|+.|+ +++|++| ++|+||+.+++
T Consensus 1 d~~~ra~~~~~~~~~-----~~~~~~~~~~~~~~~~------~~~~~~~l~~Le~~L~~~~~~~fl~G-~~tlADi~l~~ 68 (120)
T cd03203 1 DPAKREFADELLAYT-----DAFTKALYSSLIKGDP------SAEAAAALDYIENALSKFDDGPFFLG-QFSLVDIAYVP 68 (120)
T ss_pred CHHHHHHHHHHHHHH-----HHHHHHHHHHHhcCCc------hHHHHHHHHHHHHHHHhcCCCCCcCC-CccHHHHHHHH
Confidence 467899999998872 2222222222211111 2355677788888886 4789999 99999999999
Q ss_pred HHHHHHh-----hCCCC-CCchhHHHHHHHHhccccCcccCCC
Q psy13748 253 TASALVA-----LVPGL-EKYPNLAKYFDLCKSSFKGISHDEE 289 (296)
Q Consensus 253 ~l~~~~~-----~~~~~-~~~p~l~~~~~~~~~~~p~~~~~~~ 289 (296)
.+.++.. .++.+ ..+|++.+|++++.+ +|++++..+
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~P~l~~W~~~~~~-rp~~~~~~~ 110 (120)
T cd03203 69 FIERFQIFLSELFNYDITEGRPNLAAWIEEMNK-IEAYTQTKQ 110 (120)
T ss_pred HHHHHHHHHHHhcCccccccCcHHHHHHHHHhc-chHHHhHcC
Confidence 9876542 35553 689999999999999 999998443
No 84
>cd03206 GST_C_7 GST_C family, unknown subfamily 7; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.09 E-value=3.1e-10 Score=81.45 Aligned_cols=70 Identities=27% Similarity=0.465 Sum_probs=59.9
Q ss_pred cHHHHHHHHHHHHHHHHHcCCCCCcCCCcccchhHhHHHHHHHHHhhCCCCCCchhHHHHHHHHhccccCc
Q psy13748 214 PEEDKLRAREALDFAEKFLQGRKFITGDTYNIADFSIYTTASALVALVPGLEKYPNLAKYFDLCKSSFKGI 284 (296)
Q Consensus 214 ~~~~~~~~~~~l~~le~~L~~~~~l~g~~~t~aD~~~~~~l~~~~~~~~~~~~~p~l~~~~~~~~~~~p~~ 284 (296)
.+...+.+.+.++.+|+.|++++|++|+++|+||+.+++.+......+.....+|++.+|.+++.+ +|++
T Consensus 31 ~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~-~p~~ 100 (100)
T cd03206 31 KETAIARAHRLLRLLEEHLAGRDWLAGDRPTIADVAVYPYVALAPEGGVDLEDYPAIRRWLARIEA-LPGF 100 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHccCCccCCCCCCHHHHHHHHHHHHHhccCCChhhCcHHHHHHHHHHh-CcCC
Confidence 456677899999999999998899999999999999988886544444446789999999999999 9975
No 85
>cd03181 GST_C_EFB1gamma GST_C family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role
Probab=99.09 E-value=4e-10 Score=84.02 Aligned_cols=106 Identities=21% Similarity=0.212 Sum_probs=81.7
Q ss_pred HHHHHhHHhhccchhhhHHHHhhhhhhcc--CCcCCcHHHHHHHHHHHHHHHHHcCCCCCcCCCcccchhHhHHHHHHHH
Q psy13748 180 RALVDQRLHFDSGVLFSALRNIGLKIFFK--NEKEIPEEDKLRAREALDFAEKFLQGRKFITGDTYNIADFSIYTTASAL 257 (296)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~g~~~t~aD~~~~~~l~~~ 257 (296)
|+++.+|..+..+.+.+.+...+...... ......+...+.+.+.++.+++.|++++|++|+++|++|+.+++.+.+.
T Consensus 2 ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~siaDi~l~~~~~~~ 81 (123)
T cd03181 2 EAQVLQWVSFANTELLPAVAAWFLPLLGIAPYNKKSVEAALEELDRVLGVLEERLLKRTYLVGERLTLADIFVAGALLLG 81 (123)
T ss_pred hHHHHHHHHHHHhhhHHHHHHHHHHHcCccCCCHHHHHHHHHHHHHHHHHHHHHHccCceeccCCccHHHHHHHHHHHHH
Confidence 67889999998888887766554443211 1112234456678889999999999889999999999999999998876
Q ss_pred HhhCCC---CCCchhHHHHHHHHhccccCccc
Q psy13748 258 VALVPG---LEKYPNLAKYFDLCKSSFKGISH 286 (296)
Q Consensus 258 ~~~~~~---~~~~p~l~~~~~~~~~~~p~~~~ 286 (296)
...+.. ...+|++.+|.+++.+ +|++++
T Consensus 82 ~~~~~~~~~~~~~p~l~~w~~~~~~-~p~~~~ 112 (123)
T cd03181 82 FTYVFDKEWRAKYPNVTRWFNTVVN-QPIFKA 112 (123)
T ss_pred HHHHcCHHHHHhChHHHHHHHHHHc-CHHHHH
Confidence 444332 3678999999999999 999998
No 86
>cd03195 GST_C_4 GST_C family, unknown subfamily 4; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.08 E-value=7.9e-10 Score=81.30 Aligned_cols=105 Identities=18% Similarity=0.165 Sum_probs=80.6
Q ss_pred HHHHHHHhHHhhccchhhhHHHHhhhhh-hc-cCCcCCcHHHHHHHHHHHHHHHHHcC-CCCCcCCCcccchhHhHHHHH
Q psy13748 178 KVRALVDQRLHFDSGVLFSALRNIGLKI-FF-KNEKEIPEEDKLRAREALDFAEKFLQ-GRKFITGDTYNIADFSIYTTA 254 (296)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~l~~le~~L~-~~~~l~g~~~t~aD~~~~~~l 254 (296)
.+|++...|..+..+.+.+......... +. .......+...+.+.+.+..++..|+ +++||+| .+|+||+.++..+
T Consensus 2 ~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~l~G-~fSiAD~~l~~~~ 80 (114)
T cd03195 2 RQRARARQVQAWLRSDLLPIRVERSTEVVFAGAKAEPLSEAAQAAAEKLIAVAEALLPPGAANLFG-EWCIADTDLALML 80 (114)
T ss_pred HhhHHHHHHHHHHHhhHHHHHHhCCccceecCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCcccC-CccHHHHHHHHHH
Confidence 5789999999999888876522111111 11 11122445667778888889999995 5589999 5999999999999
Q ss_pred HHHHhhCCCCCCchhHHHHHHHHhccccCccc
Q psy13748 255 SALVALVPGLEKYPNLAKYFDLCKSSFKGISH 286 (296)
Q Consensus 255 ~~~~~~~~~~~~~p~l~~~~~~~~~~~p~~~~ 286 (296)
.+....|+++. |++.+|.+|+.+ ||++++
T Consensus 81 ~~~~~~g~~l~--p~l~ay~~r~~~-rPa~~~ 109 (114)
T cd03195 81 NRLVLNGDPVP--ERLRDYARRQWQ-RPSVQA 109 (114)
T ss_pred HHHHHcCCCCC--HHHHHHHHHHHC-CHHHHH
Confidence 99988888774 999999999999 999998
No 87
>cd03184 GST_C_Omega GST_C family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a re
Probab=99.08 E-value=7e-10 Score=82.93 Aligned_cols=101 Identities=26% Similarity=0.251 Sum_probs=76.7
Q ss_pred HHHHHHhHHhhccchhhhHHHHhhhhhhccCCcCCcHHHHHHHHHHHHHHHHHcCC--CCCcCCCcccchhHhHHHHHHH
Q psy13748 179 VRALVDQRLHFDSGVLFSALRNIGLKIFFKNEKEIPEEDKLRAREALDFAEKFLQG--RKFITGDTYNIADFSIYTTASA 256 (296)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~--~~~l~g~~~t~aD~~~~~~l~~ 256 (296)
+|++.+.|.......+.+ +...+. . ++..+...+.+.+.+..+|+.|++ ++|++|+++|+||+.+++.+.+
T Consensus 2 ~ra~~r~~~~~~~~~~~~-~~~~~~----~--~~~~~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~t~aDi~~~~~~~~ 74 (124)
T cd03184 2 EKAQQKLLLERFSKVVSA-FYKLLG----A--PSDREEKKAELRSALENLEEELTKRGTPFFGGDSPGMVDYMIWPWFER 74 (124)
T ss_pred hHHHHHHHHHHHhhhhHH-HHHHHh----c--cccchhhHHHHHHHHHHHHHHHHhcCCCCcCCCCccHHHHHhhHHHHH
Confidence 477778888876533222 222221 1 333567778899999999999985 7999999999999999999877
Q ss_pred HHhhC------CCCCCchhHHHHHHHHhccccCcccC
Q psy13748 257 LVALV------PGLEKYPNLAKYFDLCKSSFKGISHD 287 (296)
Q Consensus 257 ~~~~~------~~~~~~p~l~~~~~~~~~~~p~~~~~ 287 (296)
+..++ .....+|++.+|++++.+ +|++++.
T Consensus 75 ~~~~~~~~~~~~~~~~~p~l~~w~~r~~~-~p~v~~~ 110 (124)
T cd03184 75 LEALKLLLGYEFPLDRFPKLKKWMDAMKE-DPAVQAF 110 (124)
T ss_pred HHHHHhhccccCCcccChHHHHHHHHhcc-ChHHHHH
Confidence 66553 236789999999999999 9999983
No 88
>cd03207 GST_C_8 GST_C family, unknown subfamily 8; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.07 E-value=2.4e-10 Score=82.48 Aligned_cols=97 Identities=18% Similarity=0.185 Sum_probs=73.4
Q ss_pred hHHhhccchhhhHHHHhhhhhhccCCcCCcHHHHHHHHHHHHHHHHHcCCCCCcCCCcccchhHhHHHHHHHHHhhCCCC
Q psy13748 185 QRLHFDSGVLFSALRNIGLKIFFKNEKEIPEEDKLRAREALDFAEKFLQGRKFITGDTYNIADFSIYTTASALVALVPGL 264 (296)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~g~~~t~aD~~~~~~l~~~~~~~~~~ 264 (296)
+|..+..+.+.+.+...+... ..+......+.+.+.++.++++|++++|++|+++|+||+.+++.+.+....+. .
T Consensus 3 ~w~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~le~~l~~~~~l~g~~~t~aDi~~~~~~~~~~~~~~-~ 77 (103)
T cd03207 3 RWLFFYAGVVEPALIAKAMGI----EEPARMAGFGSYDDVLAALEQALAKGPYLLGERFTAADVLVGSPLGWGLQFGL-L 77 (103)
T ss_pred eeeeeccccccHHHHHHHcCC----CcchhhhhhhhHHHHHHHHHHHHccCCcccCCccCHHHHHHHHHHHHHHHcCC-C
Confidence 344555555555443332211 12234556678999999999999988999999999999999999988776554 5
Q ss_pred CCchhHHHHHHHHhccccCcccC
Q psy13748 265 EKYPNLAKYFDLCKSSFKGISHD 287 (296)
Q Consensus 265 ~~~p~l~~~~~~~~~~~p~~~~~ 287 (296)
..+|++.+|++++.+ +|+++++
T Consensus 78 ~~~p~l~~w~~~~~~-~p~~~~~ 99 (103)
T cd03207 78 PERPAFDAYIARITD-RPAFQRA 99 (103)
T ss_pred CCChHHHHHHHHHHc-CHHHHHH
Confidence 789999999999999 9999873
No 89
>TIGR02190 GlrX-dom Glutaredoxin-family domain. This C-terminal domain with homology to glutaredoxin is fused to an N-terminal peroxiredoxin-like domain.
Probab=99.04 E-value=9.2e-10 Score=75.26 Aligned_cols=71 Identities=20% Similarity=0.189 Sum_probs=61.2
Q ss_pred ccEEEecCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEeeCCeeeeecHHHHHHHH
Q psy13748 2 GLILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDGDLIVWDSHAINAYLV 75 (296)
Q Consensus 2 ~~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~~es~~I~~yl~ 75 (296)
.++||+.++||+|.+++.+|+..||+|+.+.++-. ....++.+.++..++|++..||..+.++..|..||+
T Consensus 9 ~V~ly~~~~Cp~C~~ak~~L~~~gi~y~~idi~~~---~~~~~~~~~~g~~~vP~i~i~g~~igG~~~l~~~l~ 79 (79)
T TIGR02190 9 SVVVFTKPGCPFCAKAKATLKEKGYDFEEIPLGND---ARGRSLRAVTGATTVPQVFIGGKLIGGSDELEAYLA 79 (79)
T ss_pred CEEEEECCCCHhHHHHHHHHHHcCCCcEEEECCCC---hHHHHHHHHHCCCCcCeEEECCEEEcCHHHHHHHhC
Confidence 48999999999999999999999999999887642 223456667788999999999999999999999984
No 90
>PF00043 GST_C: Glutathione S-transferase, C-terminal domain; InterPro: IPR004046 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of cephalopods is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold. Each monomer is composed of a distinct N-terminal sub-domain, which adopts the thioredoxin fold, and a C-terminal all-helical sub-domain. This entry is the C-terminal domain.; PDB: 3UAP_A 3UAR_A 3QAV_A 3QAW_A 1Y6E_A 1U88_B 4AI6_B 1UA5_A 4AKH_A 3QMZ_S ....
Probab=99.02 E-value=1.3e-09 Score=77.38 Aligned_cols=68 Identities=29% Similarity=0.512 Sum_probs=60.3
Q ss_pred cHHHHHHHHHHHHHHHHHcCCCCCcCCCcccchhHhHHHHHHHHHhhCCCC--CCchhHHHHHHHHhcccc
Q psy13748 214 PEEDKLRAREALDFAEKFLQGRKFITGDTYNIADFSIYTTASALVALVPGL--EKYPNLAKYFDLCKSSFK 282 (296)
Q Consensus 214 ~~~~~~~~~~~l~~le~~L~~~~~l~g~~~t~aD~~~~~~l~~~~~~~~~~--~~~p~l~~~~~~~~~~~p 282 (296)
.+.....+.+.++.+++.|.+++|++|+++|+||+.+++.+.++...+... +.||+|.+|++++.+ +|
T Consensus 26 ~~~~~~~~~~~l~~le~~l~~~~~l~G~~~t~ADi~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~-~P 95 (95)
T PF00043_consen 26 VEEARAKVPRYLEVLEKRLKGGPYLVGDKLTIADIALFPMLDWLERLGPDFLFEKFPKLKKWYERMFA-RP 95 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSSSSSBSS-CHHHHHHHHHHHHHHHHTTTTTHTTSHHHHHHHHHHHT-SH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCeeeccCCchhHHHHHHHHHHHHHhCCCcccccCHHHHHHHHHHHc-CC
Confidence 445567788899999999999999999999999999999999999987764 899999999999998 87
No 91
>TIGR00862 O-ClC intracellular chloride channel protein. These proteins are thought to function in the regulation of the membrane potential and in transepithelial ion absorption and secretion in the kidney.
Probab=99.02 E-value=1.6e-09 Score=89.44 Aligned_cols=113 Identities=21% Similarity=0.182 Sum_probs=71.2
Q ss_pred CCccccccCCCCCccEEEeCCEEeeccHHHHHHHHHHhCCC--CCCCCCCHHHHHHHHhHHhhccchhhhHHHHhhhhhh
Q psy13748 129 PINFSPQLNPQHTVPTLEDGDLIVWDSHAINAYLVSAYGKN--DALYPKDPKVRALVDQRLHFDSGVLFSALRNIGLKIF 206 (296)
Q Consensus 129 ~~~~~~~~nP~~~vP~L~~~g~~l~es~aI~~yl~~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (296)
+++| +++||.|+||+|+++|.+++||.+|++||++.++.+ +.+.|.++..++ ....++....
T Consensus 47 ~~~f-l~inP~g~vPvL~~~g~~l~ES~aI~eYL~e~~~~~~~p~l~p~~~~~~~---------------~~~~l~~~~~ 110 (236)
T TIGR00862 47 PEDL-QNLAPGTHPPFLTYNTEVKTDVNKIEEFLEETLCPPRYPKLSPKHPESNT---------------AGLDIFAKFS 110 (236)
T ss_pred CHHH-HHHCcCCCCCEEEECCEEeecHHHHHHHHHHHcCCCCCCCCCCCCHHHHH---------------HHHHHHHHHH
Confidence 4666 999999999999999999999999999999999742 444444332211 1111222222
Q ss_pred ccCCcCCcHHHHHHHHHHHHHHHHHcCCCCCcC------------------CCcccchhHhHHHHHHHHHhh
Q psy13748 207 FKNEKEIPEEDKLRAREALDFAEKFLQGRKFIT------------------GDTYNIADFSIYTTASALVAL 260 (296)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~------------------g~~~t~aD~~~~~~l~~~~~~ 260 (296)
.-.....+...+.+.+.+...-+.|++ +|. +..|..||.++++|+..+..+
T Consensus 111 -~~~~~~~~~~~~~~~~~l~~~l~~Le~--~L~~~~~~~~~~~~~~~~~~~~~~f~~Gd~~tlaD~~l~p~l 179 (236)
T TIGR00862 111 -AYIKNSNPEANDNLEKGLLKALKKLDD--YLNSPLPEEIDEDSAEDEKVSRRKFLDGDELTLADCNLLPKL 179 (236)
T ss_pred -HHHHcCCHHHHHHHHHHHHHHHHHHHH--HHhccccccccccccccccccCCCcccCCccchhhHHHHHHH
Confidence 111111122223333323333334444 886 467899999999999988776
No 92
>cd03183 GST_C_Theta GST_C family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenatio
Probab=99.01 E-value=5.4e-10 Score=83.77 Aligned_cols=110 Identities=23% Similarity=0.225 Sum_probs=76.6
Q ss_pred HHHHHhHHhhccchhhhHHHHhhhhh-----hccC--CcCCcHHHHHHHHHHHHHHHHH-cCCCCCcCCCcccchhHhHH
Q psy13748 180 RALVDQRLHFDSGVLFSALRNIGLKI-----FFKN--EKEIPEEDKLRAREALDFAEKF-LQGRKFITGDTYNIADFSIY 251 (296)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~--~~~~~~~~~~~~~~~l~~le~~-L~~~~~l~g~~~t~aD~~~~ 251 (296)
++++.+|..+..+.+.+.+...+... .... .+...+...+.+.+.+..+|+. +++++|++|+++|+||+.++
T Consensus 2 ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~~l~Gd~~t~ADi~l~ 81 (126)
T cd03183 2 RARVDEYLAWQHTNLRLGCAKYFWQKVLLPLLGGKPVSPEKVKKAEENLEESLDLLENYFLKDKPFLAGDEISIADLSAV 81 (126)
T ss_pred cccHHHHHHHHHhhhHhhHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHH
Confidence 45678888887766665543322211 1111 1122334456788889999987 55578999999999999999
Q ss_pred HHHHHHHhhCCC-CCCchhHHHHHHHHhcc-ccCcccCCC
Q psy13748 252 TTASALVALVPG-LEKYPNLAKYFDLCKSS-FKGISHDEE 289 (296)
Q Consensus 252 ~~l~~~~~~~~~-~~~~p~l~~~~~~~~~~-~p~~~~~~~ 289 (296)
+.+......+.+ +..+|++.+|++++.+. +|+++++.+
T Consensus 82 ~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~~~p~~~~~~~ 121 (126)
T cd03183 82 CEIMQPEAAGYDVFEGRPKLAAWRKRVKEAGNPLFDEAHK 121 (126)
T ss_pred HHHHHHHhcCCcccccCchHHHHHHHHHHhcchhHHHHHH
Confidence 888777655664 58899999999999962 589887443
No 93
>PRK10638 glutaredoxin 3; Provisional
Probab=99.00 E-value=1.9e-09 Score=74.45 Aligned_cols=72 Identities=15% Similarity=0.075 Sum_probs=62.2
Q ss_pred Cc-cEEEecCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEeeCCeeeeecHHHHHHH
Q psy13748 1 MG-LILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDGDLIVWDSHAINAYL 74 (296)
Q Consensus 1 M~-~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~~es~~I~~yl 74 (296)
|+ +++|+.+.||+|.+++.+|.++|++|+.+.++.. .....++.+.++.+++|++..||..+.....+..+-
T Consensus 1 m~~v~ly~~~~Cp~C~~a~~~L~~~gi~y~~~dv~~~--~~~~~~l~~~~g~~~vP~i~~~g~~igG~~~~~~~~ 73 (83)
T PRK10638 1 MANVEIYTKATCPFCHRAKALLNSKGVSFQEIPIDGD--AAKREEMIKRSGRTTVPQIFIDAQHIGGCDDLYALD 73 (83)
T ss_pred CCcEEEEECCCChhHHHHHHHHHHcCCCcEEEECCCC--HHHHHHHHHHhCCCCcCEEEECCEEEeCHHHHHHHH
Confidence 66 9999999999999999999999999999888643 223567889999999999999999998887777653
No 94
>cd03179 GST_C_1 GST_C family, unknown subfamily 1; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.99 E-value=5e-10 Score=81.01 Aligned_cols=100 Identities=22% Similarity=0.275 Sum_probs=74.0
Q ss_pred HHHHHHhHHhhccchhhhHHHHhhhhhhcc----CCcCCcHHHHHHHHHHHHHHHHHcCCCCCcCCCcccchhHhHHHHH
Q psy13748 179 VRALVDQRLHFDSGVLFSALRNIGLKIFFK----NEKEIPEEDKLRAREALDFAEKFLQGRKFITGDTYNIADFSIYTTA 254 (296)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~g~~~t~aD~~~~~~l 254 (296)
+|+++++|..+..+.+.+.+.......... ......+.....+.+.++.++..|++++|++|+++|+||+++++.+
T Consensus 2 ~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~g~~~slaDi~~~~~~ 81 (105)
T cd03179 2 ERAQVLRWLFFEQYSHEPYIATLRFLRVYLGLGEADAEVLAFLRERGHAALAVLEAHLAGRDFLVGDALTIADIALAAYT 81 (105)
T ss_pred cHHHHHHHHHHhhcccCccceeeeeeEeeccCCCCCHHHHHHHHHHHHHHHHHHHHHHccCccccCCCCCHHHHHHHHHH
Confidence 478899999887777766543322221111 1112334566778889999999998889999999999999999999
Q ss_pred HHHHhhCCCCCCchhHHHHHHHHh
Q psy13748 255 SALVALVPGLEKYPNLAKYFDLCK 278 (296)
Q Consensus 255 ~~~~~~~~~~~~~p~l~~~~~~~~ 278 (296)
.+....+.+...+|++.+|.++++
T Consensus 82 ~~~~~~~~~~~~~p~l~~~~~~~~ 105 (105)
T cd03179 82 HVADEGGFDLADYPAIRAWLARIE 105 (105)
T ss_pred HhccccCCChHhCccHHHHHHhhC
Confidence 887665665677999999999874
No 95
>cd03209 GST_C_Mu GST_C family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the m
Probab=98.99 E-value=1.7e-09 Score=80.46 Aligned_cols=72 Identities=22% Similarity=0.454 Sum_probs=61.8
Q ss_pred cHHHHHHHHHHHHHHHHHcCCCCCcCCCcccchhHhHHHHHHHHHhhCCC-CCCchhHHHHHHHHhccccCccc
Q psy13748 214 PEEDKLRAREALDFAEKFLQGRKFITGDTYNIADFSIYTTASALVALVPG-LEKYPNLAKYFDLCKSSFKGISH 286 (296)
Q Consensus 214 ~~~~~~~~~~~l~~le~~L~~~~~l~g~~~t~aD~~~~~~l~~~~~~~~~-~~~~p~l~~~~~~~~~~~p~~~~ 286 (296)
.+...+.+.+.+..++++|++++|++|+++|+||+.+++.+.++...+.. +..||+|.+|++++.+ +|++++
T Consensus 33 ~~~~~~~~~~~l~~le~~L~~~~~l~G~~~T~aDi~l~~~~~~~~~~~~~~~~~~P~l~~~~~rv~~-~p~vk~ 105 (121)
T cd03209 33 KPDYLAKLPDKLKLFSDFLGDRPWFAGDKITYVDFLLYEALDQHRIFEPDCLDAFPNLKDFLERFEA-LPKISA 105 (121)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCcCCCCccHHHHHHHHHHHHHHHhCccccccChHHHHHHHHHHH-CHHHHH
Confidence 33455677889999999999889999999999999999998887765332 6789999999999999 999998
No 96
>cd03204 GST_C_GDAP1 GST_C family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal thioredoxin-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=98.97 E-value=2.6e-09 Score=77.40 Aligned_cols=71 Identities=30% Similarity=0.309 Sum_probs=60.6
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCC----------CCcCCCcccchhHhHHHHHHHHHhhCCCC-----CCchhHHHHHHHH
Q psy13748 213 IPEEDKLRAREALDFAEKFLQGR----------KFITGDTYNIADFSIYTTASALVALVPGL-----EKYPNLAKYFDLC 277 (296)
Q Consensus 213 ~~~~~~~~~~~~l~~le~~L~~~----------~~l~g~~~t~aD~~~~~~l~~~~~~~~~~-----~~~p~l~~~~~~~ 277 (296)
..+.....+...+..+|++|.++ +||+|+++|+||+.+++.+.+....++.. ..+|++.+|++++
T Consensus 26 ~i~~~~~~l~~~l~~LE~~L~~~~~~~~~~~~~~yL~Gd~~TlADi~l~~~l~~~~~~~~~~~~~~~~~~P~l~~w~~rv 105 (111)
T cd03204 26 YLKKILDELEMVLDQVEQELQRRKEETEEQKCQLWLCGDTFTLADISLGVTLHRLKFLGLSRRYWGNGKRPNLEAYFERV 105 (111)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCcccccccCCCccCCCCCCHHHHHHHHHHHHHHHcCccccccccccChHHHHHHHHH
Confidence 34566788999999999999754 49999999999999999998887666543 5799999999999
Q ss_pred hccccCc
Q psy13748 278 KSSFKGI 284 (296)
Q Consensus 278 ~~~~p~~ 284 (296)
.+ ||+|
T Consensus 106 ~a-Rpsf 111 (111)
T cd03204 106 LQ-RESF 111 (111)
T ss_pred Hc-CCCC
Confidence 99 9986
No 97
>cd03078 GST_N_Metaxin1_like GST_N family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins including Tom37 from fungi. Mammalian metaxin (or metaxin 1) and the fungal protein Tom37 are components of preprotein import complexes of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals.
Probab=98.96 E-value=3.1e-09 Score=71.19 Aligned_cols=58 Identities=21% Similarity=0.165 Sum_probs=50.3
Q ss_pred CCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEeeCCeeeeecHHHHHHHHHh
Q psy13748 10 ASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDGDLIVWDSHAINAYLVSA 77 (296)
Q Consensus 10 ~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~~es~~I~~yl~~~ 77 (296)
.||+|.++.++|+..|++|+.+...- -..+|.|++|+|++++..+.||..|++||.++
T Consensus 15 ~sp~clk~~~~Lr~~~~~~~v~~~~n----------~~~sp~gkLP~l~~~~~~i~d~~~Ii~~L~~~ 72 (73)
T cd03078 15 VDPECLAVLAYLKFAGAPLKVVPSNN----------PWRSPTGKLPALLTSGTKISGPEKIIEYLRKQ 72 (73)
T ss_pred CCHHHHHHHHHHHcCCCCEEEEecCC----------CCCCCCCccCEEEECCEEecChHHHHHHHHHc
Confidence 57999999999999999998875431 13578999999999999999999999999864
No 98
>COG0625 Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.95 E-value=1.6e-09 Score=88.82 Aligned_cols=136 Identities=24% Similarity=0.167 Sum_probs=90.3
Q ss_pred ceEeeccCCCCC-CccccccCCCCCccEEEeCCE-EeeccHHHHHHHHHHhCCCCCCCCCCHH---HHHHHHhHHhhccc
Q psy13748 118 TFCSDLYLGWIP-INFSPQLNPQHTVPTLEDGDL-IVWDSHAINAYLVSAYGKNDALYPKDPK---VRALVDQRLHFDSG 192 (296)
Q Consensus 118 ~~~v~~~~~~~~-~~~~~~~nP~~~vP~L~~~g~-~l~es~aI~~yl~~~~~~~~~l~~~~~~---~~~~~~~~~~~~~~ 192 (296)
.+.|++.. ++. ++| ..+||+|+||+|++++. +++||.||++||++.|+... |+|.++. +|+.+..|..+..+
T Consensus 28 ~~~v~~~~-~~~~~~~-~~~nP~gkVPvL~~~~~~~l~ES~AI~~YL~~~~~~~~-l~p~~~~~r~~r~~~~~~~~~~~~ 104 (211)
T COG0625 28 IVLVDLDA-EQKPPDF-LALNPLGKVPALVDDDGEVLTESGAILEYLAERYPGPP-LLPADPLARRARALLLWWLFFAAS 104 (211)
T ss_pred EEEeCccc-ccCCHHH-HhcCCCCCCCEEeeCCCCeeecHHHHHHHHHhhCCCCC-cCCCCchhHHHHHHHHHHHHHHHh
Confidence 34455555 454 677 99999999999997655 99999999999999998644 9998875 88888889887654
Q ss_pred hhhhHHHHhhhhhhccCCcCCcHH-HHHHHHHHHHHHHHHcCC-CCCcCCCcccchhHhHHHHHHHHHhhC
Q psy13748 193 VLFSALRNIGLKIFFKNEKEIPEE-DKLRAREALDFAEKFLQG-RKFITGDTYNIADFSIYTTASALVALV 261 (296)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~le~~L~~-~~~l~g~~~t~aD~~~~~~l~~~~~~~ 261 (296)
.+.+. +....... ...... ..+........+...+.. ...|....+..||.++++|+.....+.
T Consensus 105 ~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~tiAD~~~~~~~~ 170 (211)
T COG0625 105 DLHPV----IGQRRRAL-LGSEPELLEAALEAARAEIRALLALLEALLADGPYLAGDRFTIADIALAPLLW 170 (211)
T ss_pred cccHH----HHHHHhhh-ccccccccHHHHHHHHHHHHHHHHHHHHHhccCCcccCCCCCHHHHHHHHHHH
Confidence 44322 22222111 111111 123344444444444432 125665678999999999998876653
No 99
>cd03201 GST_C_DHAR GST_C family, Dehydroascorbate Reductase (DHAR) subfamily; composed of plant-specific DHARs, monomeric enzymes catalyzing the reduction of DHA into ascorbic acid (AsA) using glutathione as the reductant. DHAR allows plants to recycle oxidized AsA before it is lost. AsA serves as a cofactor of violaxanthin de-epoxidase in the xanthophyll cycle and as an antioxidant in the detoxification of reactive oxygen species. Because AsA is the major reductant in plants, DHAR serves to regulate their redox state. It has been suggested that a significant portion of DHAR activity is plastidic, acting to reduce the large amounts of ascorbate oxidized during hydrogen peroxide scavenging by ascorbate peroxidase. DHAR contains a conserved cysteine in its active site and in addition to its reductase activity, shows thiol transferase activity similar to glutaredoxins.
Probab=98.94 E-value=6.5e-09 Score=77.14 Aligned_cols=74 Identities=16% Similarity=0.183 Sum_probs=61.3
Q ss_pred HHHHHHHHHHHHHHHHHcCC-CCCcCCCcccchhHhHHHHHHHHHhh-----CCC-CCCchhHHHHHHHHhccccCcccC
Q psy13748 215 EEDKLRAREALDFAEKFLQG-RKFITGDTYNIADFSIYTTASALVAL-----VPG-LEKYPNLAKYFDLCKSSFKGISHD 287 (296)
Q Consensus 215 ~~~~~~~~~~l~~le~~L~~-~~~l~g~~~t~aD~~~~~~l~~~~~~-----~~~-~~~~p~l~~~~~~~~~~~p~~~~~ 287 (296)
+...+.+.+.+..++..|.+ ++||+|+++|+||+.+++.+.++... ++. ...+|++.+|++++.+ ||+|+++
T Consensus 29 ~~~~~~l~~~l~~Le~~L~~~~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~~~~~P~l~~w~~rl~~-rps~~~t 107 (121)
T cd03201 29 DGTEQALLDELEALEDHLKENGPFINGEKISAVDLSLAPKLYHLEIALGHYKNWSVPESLTSVKSYMKALFS-RESFVKT 107 (121)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCccCCCCCCHHhHHHHHHHHHHHHHHHHhcCCCCcccchHHHHHHHHHHC-Cchhhhc
Confidence 45567788899999999984 79999999999999999987666532 333 3789999999999999 9999984
Q ss_pred CC
Q psy13748 288 EE 289 (296)
Q Consensus 288 ~~ 289 (296)
.+
T Consensus 108 ~~ 109 (121)
T cd03201 108 KA 109 (121)
T ss_pred CC
Confidence 44
No 100
>KOG0867|consensus
Probab=98.90 E-value=2.4e-09 Score=88.44 Aligned_cols=139 Identities=34% Similarity=0.408 Sum_probs=101.7
Q ss_pred eEeeccCCCCC-CccccccCCCCCccEEEeCCEEeeccHHHHHHHHHHhCC-CCCCCCCCHHHHHHHHhHHhhccchhhh
Q psy13748 119 FCSDLYLGWIP-INFSPQLNPQHTVPTLEDGDLIVWDSHAINAYLVSAYGK-NDALYPKDPKVRALVDQRLHFDSGVLFS 196 (296)
Q Consensus 119 ~~v~~~~~~~~-~~~~~~~nP~~~vP~L~~~g~~l~es~aI~~yl~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 196 (296)
..+|+..|+|. |+| +++||.|+||+|+|+|..++||.||+.||+++|.. +..|+|.+..+|+.+++|+.+..+.+.+
T Consensus 31 ~~v~~~~ge~~~pef-l~~nP~~kVP~l~d~~~~l~eS~AI~~Yl~~ky~~~~~~l~p~~~~~ra~v~~~l~~~~~~l~~ 109 (226)
T KOG0867|consen 31 KPVDLVKGEQKSPEF-LKLNPLGKVPALEDGGLTLWESHAILRYLAEKYGPLGGILLPKDLKERAIVDQWLEFENGVLDP 109 (226)
T ss_pred EEeeccccccCCHHH-HhcCcCCCCCeEecCCeEEeeHHHHHHHHHHHcCCCCcccCCcCHHHHHHHHHHHHhhhccccc
Confidence 46899999997 889 99999999999999999999999999999999974 4449999999999999999887755431
Q ss_pred HHHHhhhhhhccCC--cCCcHHHHHHHHHHHHHHHHHcCCCCCcCCCcccchhHhHHHHHHHHHhhCC
Q psy13748 197 ALRNIGLKIFFKNE--KEIPEEDKLRAREALDFAEKFLQGRKFITGDTYNIADFSIYTTASALVALVP 262 (296)
Q Consensus 197 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~le~~L~~~~~l~g~~~t~aD~~~~~~l~~~~~~~~ 262 (296)
... ....+..-. ........+.....+...-..++. ||.+..+..+|..+++|+..+..+..
T Consensus 110 -~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~--~l~~~~yl~g~~~tlADl~~~~~~~~ 173 (226)
T KOG0867|consen 110 -VTF-ERPILAPLLVGLPLNPTAVKELEAKLRKALDNLER--FLKTQVYLAGDQLTLADLSLASTLSQ 173 (226)
T ss_pred -ccc-cceeeecceecccCcchhhHHHHHHHHHHHHHHHH--HHccCCcccCCcccHHHHHHhhHHHH
Confidence 000 111111101 111223333344444444444554 99888899999999999998888733
No 101
>PF02798 GST_N: Glutathione S-transferase, N-terminal domain; InterPro: IPR004045 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of Cephalopoda is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Soluble GSTs activate glutathione (GSH) to GS-. In many GSTs, this is accomplished by a Tyr at H-bonding distance from the sulphur of GSH. These enzymes catalyse nucleophilic attack by reduced glutathione (GSH) on nonpolar compounds that contain an electrophillic carbon, nitrogen, or sulphur atom []. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold, with each monomer composed of two distinct domains []. The N-terminal domain forms a thioredoxin-like fold that binds the glutathione moiety, while the C-terminal domain contains several hydrophobic alpha-helices that specifically bind hydrophobic substrates. This entry represents the N-terminal domain of GST.; GO: 0005515 protein binding; PDB: 2VCT_H 2WJU_B 4ACS_A 1BYE_D 1AXD_B 2VCV_P 1TDI_A 1JLV_D 1Y6E_A 1U88_B ....
Probab=98.89 E-value=1.4e-09 Score=73.79 Aligned_cols=45 Identities=36% Similarity=0.502 Sum_probs=40.8
Q ss_pred eEeeccCCCCC-CccccccCCC-CCccEEEeC-CEEeeccHHHHHHHHH
Q psy13748 119 FCSDLYLGWIP-INFSPQLNPQ-HTVPTLEDG-DLIVWDSHAINAYLVS 164 (296)
Q Consensus 119 ~~v~~~~~~~~-~~~~~~~nP~-~~vP~L~~~-g~~l~es~aI~~yl~~ 164 (296)
..+++..+++. ++| ++.||. |+||+|+++ |.+++||.||++||++
T Consensus 29 ~~v~~~~~~~~~~e~-~~~~p~~g~vP~l~~~~~~~l~es~AI~~YLa~ 76 (76)
T PF02798_consen 29 VRVDFEKGEHKSPEF-LAINPMFGKVPALEDGDGFVLTESNAILRYLAR 76 (76)
T ss_dssp EEEETTTTGGGSHHH-HHHTTTSSSSSEEEETTTEEEESHHHHHHHHHH
T ss_pred EEEecccccccchhh-hhcccccceeeEEEECCCCEEEcHHHHHHHhCC
Confidence 56888888875 777 999999 999999998 9999999999999985
No 102
>PLN02378 glutathione S-transferase DHAR1
Probab=98.87 E-value=5.8e-09 Score=85.57 Aligned_cols=109 Identities=23% Similarity=0.213 Sum_probs=66.9
Q ss_pred CCccccccCCCCCccEEEeCCEEeeccHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhHHhhccchhhhHHHHhhhhhhcc
Q psy13748 129 PINFSPQLNPQHTVPTLEDGDLIVWDSHAINAYLVSAYGKNDALYPKDPKVRALVDQRLHFDSGVLFSALRNIGLKIFFK 208 (296)
Q Consensus 129 ~~~~~~~~nP~~~vP~L~~~g~~l~es~aI~~yl~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (296)
+++| +++||.|+||+|++||.+++||.||++||+++++.. .+ .++.+++.+. .. . ...+ .
T Consensus 48 ~~~~-l~inP~G~VPvL~~~~~~l~ES~aI~~YL~~~~~~~-~l--~~~~~~a~i~-----------~~---~-~~~~-~ 107 (213)
T PLN02378 48 PQWF-LDISPQGKVPVLKIDDKWVTDSDVIVGILEEKYPDP-PL--KTPAEFASVG-----------SN---I-FGTF-G 107 (213)
T ss_pred CHHH-HHhCCCCCCCEEEECCEEecCHHHHHHHHHHhCCCC-CC--CCHHHHHHHH-----------HH---H-HHHH-H
Confidence 3566 999999999999999999999999999999999742 23 2444444321 11 1 1111 0
Q ss_pred CCcCCcHHHHHHHHHHHHHHHHHcCC-CCCcC--CCcccchhHhHHHHHHHHHhhC
Q psy13748 209 NEKEIPEEDKLRAREALDFAEKFLQG-RKFIT--GDTYNIADFSIYTTASALVALV 261 (296)
Q Consensus 209 ~~~~~~~~~~~~~~~~l~~le~~L~~-~~~l~--g~~~t~aD~~~~~~l~~~~~~~ 261 (296)
.... ..... ......+.+.|.. ...|. +..|..||.++++|+..+..+.
T Consensus 108 ~~~~-~~~~~---~~~~~~~~~~l~~le~~L~~~~~~fl~Gd~~T~ADi~l~~~~~ 159 (213)
T PLN02378 108 TFLK-SKDSN---DGSEHALLVELEALENHLKSHDGPFIAGERVSAVDLSLAPKLY 159 (213)
T ss_pred HHHh-cCChh---hHHHHHHHHHHHHHHHHHhcCCCCCcCCCCCchhhHHHHHHHH
Confidence 0000 00111 1222233333332 23665 4579999999999999887753
No 103
>PLN02395 glutathione S-transferase
Probab=98.85 E-value=9.5e-09 Score=84.41 Aligned_cols=144 Identities=23% Similarity=0.294 Sum_probs=102.6
Q ss_pred hccCcceEeeccCCCCC-CccccccCCCCCccEEEeCCEEeeccHHHHHHHHHHhCC-CCCCCCCCHHHHHHHHhHHhhc
Q psy13748 113 IGVSKTFCSDLYLGWIP-INFSPQLNPQHTVPTLEDGDLIVWDSHAINAYLVSAYGK-NDALYPKDPKVRALVDQRLHFD 190 (296)
Q Consensus 113 ~~~~~~~~v~~~~~~~~-~~~~~~~nP~~~vP~L~~~g~~l~es~aI~~yl~~~~~~-~~~l~~~~~~~~~~~~~~~~~~ 190 (296)
++|+. +.+++..+++. ++| ++.||.|+||+|+++|.+++||.||++||++.++. .+.|+|.++.+++++++|..+.
T Consensus 25 l~~e~-~~v~~~~~~~~~~~~-~~~nP~g~vP~L~~~~~~l~ES~aI~~YL~~~~~~~~~~l~p~~~~~~~~~~~~~~~~ 102 (215)
T PLN02395 25 VEFET-VPVDLMKGEHKQPEY-LALQPFGVVPVIVDGDYKIFESRAIMRYYAEKYRSQGPDLLGKTIEERGQVEQWLDVE 102 (215)
T ss_pred CCceE-EEeccccCCcCCHHH-HhhCCCCCCCEEEECCEEEEcHHHHHHHHHHHcCCCCcCcCCCChhHHHHHHHHHHHH
Confidence 34443 45777677665 777 99999999999999999999999999999999975 3469999999999999999988
Q ss_pred cchhhhHHHHhhhhhhccCC--cCCcHHHHHHHHHHHHHHHHHcCCCCCcCCCcccchhHhHHHHHHHHHhh
Q psy13748 191 SGVLFSALRNIGLKIFFKNE--KEIPEEDKLRAREALDFAEKFLQGRKFITGDTYNIADFSIYTTASALVAL 260 (296)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~le~~L~~~~~l~g~~~t~aD~~~~~~l~~~~~~ 260 (296)
...+.+.+............ ....+...+...+.+...-..|+. .|.++.+.+||-++++|+..+..+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~--~L~~~~~l~G~~~s~ADi~l~~~~ 172 (215)
T PLN02395 103 ATSYHPPLLNLTLHILFASKMGFPADEKVIKESEEKLAKVLDVYEA--RLSKSKYLAGDFVSLADLAHLPFT 172 (215)
T ss_pred HHhcCchHHHHHHHHHhhhhccCCCcHHHHHHHHHHHHHHHHHHHH--HhcCCccccCCCcCHHHHHHHHHH
Confidence 77766655444443333322 111222223333333444445554 677778999999999999865543
No 104
>cd03210 GST_C_Pi GST_C family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an incre
Probab=98.85 E-value=8.8e-09 Score=77.16 Aligned_cols=71 Identities=21% Similarity=0.355 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHHHHHHHcCC---CCCcCCCcccchhHhHHHHHHHHHhhC-CCCCCchhHHHHHHHHhccccCccc
Q psy13748 215 EEDKLRAREALDFAEKFLQG---RKFITGDTYNIADFSIYTTASALVALV-PGLEKYPNLAKYFDLCKSSFKGISH 286 (296)
Q Consensus 215 ~~~~~~~~~~l~~le~~L~~---~~~l~g~~~t~aD~~~~~~l~~~~~~~-~~~~~~p~l~~~~~~~~~~~p~~~~ 286 (296)
+...+.+.+.+..++++|++ ++|++|+++|+||+.+++.+.++.... ..+..+|++.+|++++.+ +|++++
T Consensus 34 ~~~~~~~~~~l~~le~~L~~~~~~~~l~G~~~T~ADi~l~~~~~~~~~~~~~~~~~~P~l~~~~~rv~~-~p~v~~ 108 (126)
T cd03210 34 DDYIKDLPEQLKPFEKLLSKNNGKGFIVGDKISFADYNLFDLLDIHLVLAPGCLDAFPLLKAFVERLSA-RPKLKA 108 (126)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCccHHHHHHHHHHHHHHHhChHhhhcChHHHHHHHHHHh-CcHHHH
Confidence 34456678889999999974 589999999999999999887776542 226889999999999999 999998
No 105
>PRK13972 GSH-dependent disulfide bond oxidoreductase; Provisional
Probab=98.84 E-value=5.1e-09 Score=86.05 Aligned_cols=139 Identities=18% Similarity=0.162 Sum_probs=95.6
Q ss_pred hccCcceEeeccCCCCC-CccccccCCCCCccEEEe-----CC--EEeeccHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Q psy13748 113 IGVSKTFCSDLYLGWIP-INFSPQLNPQHTVPTLED-----GD--LIVWDSHAINAYLVSAYGKNDALYPKDPKVRALVD 184 (296)
Q Consensus 113 ~~~~~~~~v~~~~~~~~-~~~~~~~nP~~~vP~L~~-----~g--~~l~es~aI~~yl~~~~~~~~~l~~~~~~~~~~~~ 184 (296)
++|+. ..+++..+++. ++| +++||.|+||+|++ || .+++||.||++||++.++ .+.|.++.+++++.
T Consensus 24 l~~e~-~~v~~~~~~~~~~~~-~~iNP~gkVP~L~~~~~~d~g~~~~L~ES~AI~~YL~~~~~---~l~p~~~~~ra~~~ 98 (215)
T PRK13972 24 LDYRL-IKVDLGKGGQFRPEF-LRISPNNKIPAIVDHSPADGGEPLSLFESGAILLYLAEKTG---LFLSHETRERAATL 98 (215)
T ss_pred CCcEE-EEecCcccccCCHHH-HhhCcCCCCCEEEeCCCCCCCCceeEEcHHHHHHHHHHhcC---CCCCCCHHHHHHHH
Confidence 44443 35677777775 788 99999999999996 45 589999999999999985 37788999999999
Q ss_pred hHHhhccchhhhHHHHhhhhhhccCCcCCcHHHHHHHHHHHHHHHHHcCCCCCcCCCcccchhHhHHHHHHHHHhh
Q psy13748 185 QRLHFDSGVLFSALRNIGLKIFFKNEKEIPEEDKLRAREALDFAEKFLQGRKFITGDTYNIADFSIYTTASALVAL 260 (296)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~g~~~t~aD~~~~~~l~~~~~~ 260 (296)
.|..+..+.+.+.+... ...........+...+.....+......|+. +|.+..+..||.++++|+..+..+
T Consensus 99 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~--~L~~~~~l~Gd~~t~ADi~l~~~~ 170 (215)
T PRK13972 99 QWLFWQVGGLGPMLGQN--HHFNHAAPQTIPYAIERYQVETQRLYHVLNK--RLENSPWLGGENYSIADIACWPWV 170 (215)
T ss_pred HHHHHHhhccCcceeee--eeeeccCCCCCchHHHHHHHHHHHHHHHHHH--HhccCccccCCCCCHHHHHHHHHH
Confidence 99988766555332111 0011111111223333344444445555664 787778999999999999865544
No 106
>PLN02473 glutathione S-transferase
Probab=98.84 E-value=1.5e-08 Score=83.23 Aligned_cols=146 Identities=19% Similarity=0.230 Sum_probs=103.6
Q ss_pred hhccCcceEeeccCCCCC-CccccccCCCCCccEEEeCCEEeeccHHHHHHHHHHhCC-CCCCCCCCHHHHHHHHhHHhh
Q psy13748 112 NIGVSKTFCSDLYLGWIP-INFSPQLNPQHTVPTLEDGDLIVWDSHAINAYLVSAYGK-NDALYPKDPKVRALVDQRLHF 189 (296)
Q Consensus 112 ~~~~~~~~~v~~~~~~~~-~~~~~~~nP~~~vP~L~~~g~~l~es~aI~~yl~~~~~~-~~~l~~~~~~~~~~~~~~~~~ 189 (296)
.++|+. ..+++..+++. +++ .++||+|+||+|++||.+++||.||++||++.++. ...|.|.++.+++++.+|..+
T Consensus 25 gi~ye~-~~v~~~~~~~~~~~~-~~~nP~g~vP~L~~~g~~l~ES~aI~~YL~~~~~~~~~~l~p~~~~~ra~~~~~~~~ 102 (214)
T PLN02473 25 GIEFEV-IHVDLDKLEQKKPEH-LLRQPFGQVPAIEDGDLKLFESRAIARYYATKYADQGTDLLGKTLEHRAIVDQWVEV 102 (214)
T ss_pred CCCceE-EEecCcccccCCHHH-HhhCCCCCCCeEEECCEEEEehHHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHHHH
Confidence 344444 45788777765 788 78999999999999999999999999999999975 346999999999999999998
Q ss_pred ccchhhhHHHHhhhhhhccCC--cCCcHHHHHHHHHHHHHHHHHcCCCCCcCCCcccchhHhHHHHHHHHHhhC
Q psy13748 190 DSGVLFSALRNIGLKIFFKNE--KEIPEEDKLRAREALDFAEKFLQGRKFITGDTYNIADFSIYTTASALVALV 261 (296)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~le~~L~~~~~l~g~~~t~aD~~~~~~l~~~~~~~ 261 (296)
..+.+...+...+........ ........+.....+...-+.|++ .|.+..+.+||.++++|+..+..+.
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~--~L~~~~~l~Gd~~t~ADi~~~~~~~ 174 (214)
T PLN02473 103 ENNYFYAVALPLVINLVFKPRLGEPCDVALVEELKVKFDKVLDVYEN--RLATNRYLGGDEFTLADLTHMPGMR 174 (214)
T ss_pred HHhcccHHHHHHHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHH--HhccCCcccCCCCCHHHHHHHHHHH
Confidence 876655544333333332221 111222333333344444445554 6776679999999999998776654
No 107
>PRK15113 glutathione S-transferase; Provisional
Probab=98.84 E-value=9.7e-09 Score=84.31 Aligned_cols=141 Identities=16% Similarity=0.117 Sum_probs=95.7
Q ss_pred hccCcceEeeccCCCCC-CccccccCCCCCccEEEeCCEEeeccHHHHHHHHHHhCCCC--CCCCCCHHHHHHHHhHHhh
Q psy13748 113 IGVSKTFCSDLYLGWIP-INFSPQLNPQHTVPTLEDGDLIVWDSHAINAYLVSAYGKND--ALYPKDPKVRALVDQRLHF 189 (296)
Q Consensus 113 ~~~~~~~~v~~~~~~~~-~~~~~~~nP~~~vP~L~~~g~~l~es~aI~~yl~~~~~~~~--~l~~~~~~~~~~~~~~~~~ 189 (296)
++|+. ..+++.++++. ++| .++||.|+||+|++||.+++||.||++||++.++..+ .|+|.++.+++++++|..+
T Consensus 31 i~~e~-~~v~~~~~~~~~~~~-~~~nP~g~VP~L~~~~~~l~ES~aI~~YL~~~~~~~~~~~l~p~~~~~ra~~~~~~~~ 108 (214)
T PRK15113 31 LPFEL-KTVDLDAGEHLQPTY-QGYSLTRRVPTLQHDDFELSESSAIAEYLEERFAPPAWERIYPADLQARARARQIQAW 108 (214)
T ss_pred CCCeE-EEeCCCCccccCHHH-HhcCCCCCCCEEEECCEEEecHHHHHHHHHHHcCCCCccccCCCCHHHHHHHHHHHHH
Confidence 34443 46777777766 777 9999999999999999999999999999999997532 4999999999999999988
Q ss_pred ccchhhhHHHHhhhhhhccCCcCCcHHHHHHHHHHHHHHHHHcCCCCCcCC-CcccchhHhHHHHHHHHHhh
Q psy13748 190 DSGVLFSALRNIGLKIFFKNEKEIPEEDKLRAREALDFAEKFLQGRKFITG-DTYNIADFSIYTTASALVAL 260 (296)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~g-~~~t~aD~~~~~~l~~~~~~ 260 (296)
..+.+........ .... ......+...+...+.+...-+.|+. .|.+ +.+..+| ++++|+..+..+
T Consensus 109 ~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~l~~le~--~L~~~~~~l~G~-~TlADi~l~~~l 175 (214)
T PRK15113 109 LRSDLMPLREERP-TDVV-FAGAKKAPLSEAGKAAAEKLFAVAER--LLAPGQPNLFGE-WCIADTDLALML 175 (214)
T ss_pred HHhhhHHHhccCc-cchh-ccCCCCCcccHHHHHHHHHHHHHHHH--HHhcCCCEeeCC-ccHHHHHHHHHH
Confidence 7654432211000 0000 11111122233344444444455554 6764 4577787 999999877765
No 108
>cd03029 GRX_hybridPRX5 Glutaredoxin (GRX) family, PRX5 hybrid subfamily; composed of hybrid proteins containing peroxiredoxin (PRX) and GRX domains, which is found in some pathogenic bacteria and cyanobacteria. PRXs are thiol-specific antioxidant (TSA) proteins that confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins. PRX-GRX hybrid proteins from Haemophilus influenza and Neisseria meningitis exhibit GSH-dependent peroxidase activity. The flow of reducing equivalents in the catalytic cycle of the hybrid protein goes from NADPH - GSH reductase - GSH - GRX domain of hybrid - PRX domain of hybrid - peroxide substrate.
Probab=98.82 E-value=2.3e-08 Score=67.02 Aligned_cols=71 Identities=17% Similarity=0.121 Sum_probs=59.6
Q ss_pred ccEEEecCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEeeCCeeeeecHHHHHHHH
Q psy13748 2 GLILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDGDLIVWDSHAINAYLV 75 (296)
Q Consensus 2 ~~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~~es~~I~~yl~ 75 (296)
.+++|..++||+|.+++.+|...|++|+.+.++-.. ....+.+......+|++..||..+.++..|.+||+
T Consensus 2 ~v~lys~~~Cp~C~~ak~~L~~~~i~~~~~~v~~~~---~~~~~~~~~g~~~vP~ifi~g~~igg~~~l~~~l~ 72 (72)
T cd03029 2 SVSLFTKPGCPFCARAKAALQENGISYEEIPLGKDI---TGRSLRAVTGAMTVPQVFIDGELIGGSDDLEKYFA 72 (72)
T ss_pred eEEEEECCCCHHHHHHHHHHHHcCCCcEEEECCCCh---hHHHHHHHhCCCCcCeEEECCEEEeCHHHHHHHhC
Confidence 378999999999999999999999999988886422 12344556677899999999999999999999974
No 109
>cd03052 GST_N_GDAP1 GST_N family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal TRX-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=98.82 E-value=3.6e-09 Score=71.07 Aligned_cols=43 Identities=37% Similarity=0.393 Sum_probs=37.5
Q ss_pred EeeccCCCCC-CccccccCCCCCccEEEeCCEEeeccHHHHHHHH
Q psy13748 120 CSDLYLGWIP-INFSPQLNPQHTVPTLEDGDLIVWDSHAINAYLV 163 (296)
Q Consensus 120 ~v~~~~~~~~-~~~~~~~nP~~~vP~L~~~g~~l~es~aI~~yl~ 163 (296)
.+++..+++. ++| .++||.|+||+|++||.+++||.||++||+
T Consensus 30 ~v~~~~~~~~~~~~-~~inP~g~vP~L~~~g~~l~Es~aI~~yLe 73 (73)
T cd03052 30 DVSLPLSEHNEPWF-MRLNPTGEVPVLIHGDNIICDPTQIIDYLE 73 (73)
T ss_pred EecCCcCccCCHHH-HHhCcCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 4667777765 566 999999999999999999999999999984
No 110
>cd03208 GST_C_Alpha GST_C family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Alpha subfamily is composed of vertebrate GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GS
Probab=98.81 E-value=1e-08 Score=77.86 Aligned_cols=66 Identities=21% Similarity=0.373 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHHcC--CCCCcCCCcccchhHhHHHHHHHHHhhCCC-CCCchhHHHHHHHHhccccCccc
Q psy13748 220 RAREALDFAEKFLQ--GRKFITGDTYNIADFSIYTTASALVALVPG-LEKYPNLAKYFDLCKSSFKGISH 286 (296)
Q Consensus 220 ~~~~~l~~le~~L~--~~~~l~g~~~t~aD~~~~~~l~~~~~~~~~-~~~~p~l~~~~~~~~~~~p~~~~ 286 (296)
.+.+.+..+|++|+ +++|++|+++|+||+.++..+.++...... +..||+|.+|++++.+ +|++++
T Consensus 43 ~~~~~l~~lE~~L~~~~~~~l~G~~~T~ADi~l~~~l~~~~~~~~~~l~~~P~l~~~~~rv~~-~P~vk~ 111 (137)
T cd03208 43 AKNRYFPVFEKVLKSHGQDFLVGNKLSRADIHLLEAILMVEELDPSLLSDFPLLQAFKTRISN-LPTIKK 111 (137)
T ss_pred HHHHHHHHHHHHHHhCCCCeeeCCCCCHHHHHHHHHHHHHHHhchhhhccChHHHHHHHHHHc-CHHHHH
Confidence 45688899999998 678999999999999999999877654333 6889999999999999 999998
No 111
>KOG3028|consensus
Probab=98.80 E-value=6.1e-07 Score=74.87 Aligned_cols=208 Identities=19% Similarity=0.159 Sum_probs=129.3
Q ss_pred CCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEe-eCCeeeeecHHHHHHHHHhcCCCCCCCCC-
Q psy13748 10 ASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLE-DGDLIVWDSHAINAYLVSAYGKNDALYPK- 87 (296)
Q Consensus 10 ~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~-~~~~~~~es~~I~~yl~~~~~~~~~l~~~- 87 (296)
.++-|..+.++++.++-|.+++..+- +| .+|.|++|+|+ ++|..+..-..|+.||...-. ...+-..
T Consensus 16 id~~sL~~l~y~kl~~~~l~v~~ssN-------~~---~s~sg~LP~l~~~ng~~va~~~~iv~~L~k~~~-ky~~d~dl 84 (313)
T KOG3028|consen 16 IDPDSLAALIYLKLAGAPLKVVVSSN-------PW---RSPSGKLPYLITDNGTKVAGPVKIVQFLKKNTK-KYNLDADL 84 (313)
T ss_pred cChhHHHHHHHHHHhCCCceeEeecC-------CC---CCCCCCCCeEEecCCceeccHHHHHHHHHHhcc-cCCcCccH
Confidence 47789999999999997666555442 11 56899999998 566999999999999987421 1122222
Q ss_pred CHHHHHHHhhhhhccccchhhhhhhhccCcceEeeccCCCCCCccccccCCCCCccEEEeCCEEeeccHHHHHHHHHHhC
Q psy13748 88 DPKVRALVDQRLHFDSGVLFSALRNIGVSKTFCSDLYLGWIPINFSPQLNPQHTVPTLEDGDLIVWDSHAINAYLVSAYG 167 (296)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~nP~~~vP~L~~~g~~l~es~aI~~yl~~~~~ 167 (296)
...+++....|+.++.+.+.+++.+.-|=++. + | ..++--+.+...+
T Consensus 85 ~~kq~a~~~a~~sll~~~l~~a~~~t~~v~~~--------N---y----------------------~e~Tkk~yak~l~ 131 (313)
T KOG3028|consen 85 SAKQLADTLAFMSLLEENLEPALLYTFWVDTE--------N---Y----------------------NEVTKKWYAKALP 131 (313)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--------c---h----------------------hhHhHHHHHhcCC
Confidence 37889999999999999888875544221110 0 0 0001111111000
Q ss_pred -CCCCCCCCCHHHHHHHHhHHhhccchhhhHHHHhhhhhhccCCcCCcHHHHHHHHHHHHHHHHHcCCCCCcCCCcccch
Q psy13748 168 -KNDALYPKDPKVRALVDQRLHFDSGVLFSALRNIGLKIFFKNEKEIPEEDKLRAREALDFAEKFLQGRKFITGDTYNIA 246 (296)
Q Consensus 168 -~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~g~~~t~a 246 (296)
+-.-++| ...+.+..+.+.. .. +.......+......+.+..+.+.|+..+|++||++|..
T Consensus 132 fP~n~~~p--~~l~~qAk~rl~l---------------~~-g~~~~~e~~i~~~Aska~~~LS~~Lgs~kffFgd~pssl 193 (313)
T KOG3028|consen 132 FPLNYILP--GKLQRQAKERLQL---------------TL-GELTEREDQIYKDASKALNLLSTLLGSKKFFFGDKPSSL 193 (313)
T ss_pred Cchhhcch--hhhHHHHHHHHHH---------------Hh-CCchhhHHHHHHHHHHHHHHHHHHhcCceEeeCCCCchH
Confidence 0000000 0011111111111 00 111111334455678889999999999999999999999
Q ss_pred hHhHHHHHHHHHhhCCC-------CCCchhHHHHHHHHhc
Q psy13748 247 DFSIYTTASALVALVPG-------LEKYPNLAKYFDLCKS 279 (296)
Q Consensus 247 D~~~~~~l~~~~~~~~~-------~~~~p~l~~~~~~~~~ 279 (296)
|+.+++.+..+..+.+. +...++|.+|.+++.+
T Consensus 194 Da~lfs~la~~~~~~Lp~~~Lq~~l~~~~NL~~~~~~i~s 233 (313)
T KOG3028|consen 194 DALLFSYLAILLQVALPNDSLQVHLLAHKNLVRYVERIRS 233 (313)
T ss_pred HHHHHHHHHHHHhccCCchhHHHHHHhcchHHHHHHHHHH
Confidence 99999999886665332 3448999999999985
No 112
>cd03194 GST_C_3 GST_C family, unknown subfamily 3; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.80 E-value=3.1e-08 Score=72.75 Aligned_cols=69 Identities=20% Similarity=0.240 Sum_probs=53.6
Q ss_pred cHHHHHHHHHHHHHHHHHc---CCCCCcCCCcccchhHhHHHHHHHHHhhCCCCCCchhHHHHHHHHhccccCccc
Q psy13748 214 PEEDKLRAREALDFAEKFL---QGRKFITGDTYNIADFSIYTTASALVALVPGLEKYPNLAKYFDLCKSSFKGISH 286 (296)
Q Consensus 214 ~~~~~~~~~~~l~~le~~L---~~~~~l~g~~~t~aD~~~~~~l~~~~~~~~~~~~~p~l~~~~~~~~~~~p~~~~ 286 (296)
.+...+.+.+.+..++..| ++++||+|+ +|+||+.+++.+.+....+.+. .|++.+|++++.+ +|++++
T Consensus 39 ~~~~~~~~~~~~~~le~~l~~~~~~~yl~Gd-~T~ADi~l~~~~~~~~~~~~~~--~P~l~~~~~rv~~-rPsv~~ 110 (114)
T cd03194 39 SEAVQADIARIEAIWAECLARFQGGPFLFGD-FSIADAFFAPVVTRFRTYGLPL--SPAAQAYVDALLA-HPAMQE 110 (114)
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCCCCCCC-CcHHHHHHHHHHHHHHHcCCCC--CHHHHHHHHHHHC-CHHHHH
Confidence 3444555666666666655 467899999 9999999999988776655543 3999999999999 999987
No 113
>PF13410 GST_C_2: Glutathione S-transferase, C-terminal domain; PDB: 4DEJ_H 3IC8_A 2JL4_A 2V6K_B 3CBU_B 1JLW_B 3F6D_B 3G7I_A 3F63_A 3G7J_B ....
Probab=98.79 E-value=1.7e-08 Score=67.03 Aligned_cols=63 Identities=30% Similarity=0.450 Sum_probs=53.9
Q ss_pred cHHHHHHHHHHHHHHHHHcCCCCCcCCCcccchhHhHHHHHHHHHhhCCC---CCCchhHHHHHHH
Q psy13748 214 PEEDKLRAREALDFAEKFLQGRKFITGDTYNIADFSIYTTASALVALVPG---LEKYPNLAKYFDL 276 (296)
Q Consensus 214 ~~~~~~~~~~~l~~le~~L~~~~~l~g~~~t~aD~~~~~~l~~~~~~~~~---~~~~p~l~~~~~~ 276 (296)
.++..+.+.+.++.++++|.+++|++|+++|++|+.+++.+.++...+.. ...+|+|.+|++|
T Consensus 4 ~~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~r 69 (69)
T PF13410_consen 4 VERARAQLEAALDALEDHLADGPFLFGDRPSLADIALAPFLWRLRFVGPDFDLLEAYPNLRAWYER 69 (69)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSSBTTBSS--HHHHHHHHHHHHHHHCTHTCCHHTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHHhCcCcCccccCHHHHHHHhC
Confidence 45667889999999999999999999999999999999999998888543 5789999999986
No 114
>cd03046 GST_N_GTT1_like GST_N family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endoplasmic reticulum. Its expression is induced after diauxic shift and remains high throughout the stationary phase. S. pomb
Probab=98.77 E-value=1.1e-08 Score=69.33 Aligned_cols=47 Identities=38% Similarity=0.517 Sum_probs=40.1
Q ss_pred EeeccCCCCC-CccccccCCCCCccEEEeCCEEeeccHHHHHHHHHHhC
Q psy13748 120 CSDLYLGWIP-INFSPQLNPQHTVPTLEDGDLIVWDSHAINAYLVSAYG 167 (296)
Q Consensus 120 ~v~~~~~~~~-~~~~~~~nP~~~vP~L~~~g~~l~es~aI~~yl~~~~~ 167 (296)
.++...+++. ++| .+.||.++||+|+++|..++||.||++||++.++
T Consensus 29 ~~~~~~~~~~~~~~-~~~~p~~~vP~l~~~g~~l~es~aI~~yL~~~~~ 76 (76)
T cd03046 29 LYDRGPGEQAPPEY-LAINPLGKVPVLVDGDLVLTESAAIILYLAEKYG 76 (76)
T ss_pred EeCCCCCccCCHHH-HhcCCCCCCCEEEECCEEEEcHHHHHHHHHHhCc
Confidence 4566556655 667 9999999999999999999999999999998764
No 115
>cd03057 GST_N_Beta GST_N family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site forms a covalent bond with GSH.
Probab=98.76 E-value=9.4e-09 Score=69.89 Aligned_cols=48 Identities=25% Similarity=0.258 Sum_probs=40.3
Q ss_pred eEeeccCCCCC-CccccccCCCCCccEEEeC-CEEeeccHHHHHHHHHHhC
Q psy13748 119 FCSDLYLGWIP-INFSPQLNPQHTVPTLEDG-DLIVWDSHAINAYLVSAYG 167 (296)
Q Consensus 119 ~~v~~~~~~~~-~~~~~~~nP~~~vP~L~~~-g~~l~es~aI~~yl~~~~~ 167 (296)
..++...+++. ++| .+.||.++||+|+++ |..++||.||++||++.++
T Consensus 28 ~~~~~~~~~~~~~~~-~~~np~~~vP~l~~~~g~~l~eS~aI~~yL~~~~p 77 (77)
T cd03057 28 VRVDLRTKTQKGADY-LAINPKGQVPALVLDDGEVLTESAAILQYLADLHP 77 (77)
T ss_pred EEEecccCccCCHhH-HHhCCCCCCCEEEECCCcEEEcHHHHHHHHHHhCc
Confidence 34666666665 677 899999999999976 8999999999999998764
No 116
>PLN02817 glutathione dehydrogenase (ascorbate)
Probab=98.75 E-value=4.6e-08 Score=82.54 Aligned_cols=110 Identities=20% Similarity=0.170 Sum_probs=68.6
Q ss_pred CCCccccccCCCCCccEEEeCCEEeeccHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhHHhhccchhhhHHHHhhhhhhc
Q psy13748 128 IPINFSPQLNPQHTVPTLEDGDLIVWDSHAINAYLVSAYGKNDALYPKDPKVRALVDQRLHFDSGVLFSALRNIGLKIFF 207 (296)
Q Consensus 128 ~~~~~~~~~nP~~~vP~L~~~g~~l~es~aI~~yl~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (296)
.+++| +++||.|+||+|+++|.+++||.+|++||++.++.. .+ .++.+++++..| .+ ....
T Consensus 100 ~~~~f-l~iNP~GkVPvL~~d~~~L~ES~aI~~YL~e~~p~~-~L--~~~~era~i~~~--------------l~-~~~~ 160 (265)
T PLN02817 100 KPEWF-LKISPEGKVPVVKLDEKWVADSDVITQALEEKYPDP-PL--ATPPEKASVGSK--------------IF-STFI 160 (265)
T ss_pred CCHHH-HhhCCCCCCCEEEECCEEEecHHHHHHHHHHHCCCC-CC--CCHHHHHHHHHH--------------HH-HHHH
Confidence 34556 999999999999998899999999999999999853 33 356666654321 11 1111
Q ss_pred cCCcCCcHHHHHHHHHHHHHHHHHcCCCCCcC-CCcccchhHhHHHHHHHHHhh
Q psy13748 208 KNEKEIPEEDKLRAREALDFAEKFLQGRKFIT-GDTYNIADFSIYTTASALVAL 260 (296)
Q Consensus 208 ~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~-g~~~t~aD~~~~~~l~~~~~~ 260 (296)
.. -..... .....+.+...-..|++ +|. ++.|..||.++++|+..+..+
T Consensus 161 ~~-~~~~~~-~~~~~~~l~~~l~~LE~--~L~~~g~yl~Gd~~SlADi~l~p~L 210 (265)
T PLN02817 161 GF-LKSKDP-GDGTEQALLDELTSFDD--YIKENGPFINGEKISAADLSLGPKL 210 (265)
T ss_pred HH-hccCCc-chHHHHHHHHHHHHHHH--HHhcCCCeeCCCCCCHHHHHHHHHH
Confidence 10 000111 11111122222223333 675 347899999999999988765
No 117
>cd03050 GST_N_Theta GST_N family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenation of dihalomethanes. This is an essential process in methylotrophic bacteria to enable them to use chloromethane and DC
Probab=98.74 E-value=1.1e-08 Score=69.30 Aligned_cols=46 Identities=35% Similarity=0.470 Sum_probs=38.7
Q ss_pred EeeccCCCCC-CccccccCCCCCccEEEeCCEEeeccHHHHHHHHHHh
Q psy13748 120 CSDLYLGWIP-INFSPQLNPQHTVPTLEDGDLIVWDSHAINAYLVSAY 166 (296)
Q Consensus 120 ~v~~~~~~~~-~~~~~~~nP~~~vP~L~~~g~~l~es~aI~~yl~~~~ 166 (296)
.++...+++. +++ .+.||.|+||+|+++|..++||.||++||+++|
T Consensus 30 ~v~~~~~~~~~~~~-~~~~p~~~vP~L~~~~~~l~eS~aI~~Yl~~~~ 76 (76)
T cd03050 30 PIDLRKGEQLTPEF-KKINPFGKVPAIVDGDFTLAESVAILRYLARKF 76 (76)
T ss_pred EecCCCCCcCCHHH-HHhCcCCCCCEEEECCEEEEcHHHHHHHHHhhC
Confidence 4566556554 566 899999999999999999999999999998864
No 118
>cd03027 GRX_DEP Glutaredoxin (GRX) family, Dishevelled, Egl-10, and Pleckstrin (DEP) subfamily; composed of uncharacterized proteins containing a GRX domain and additional domains DEP and DUF547, both of which have unknown functions. GRX is a glutathione (GSH) dependent reductase containing a redox active CXXC motif in a TRX fold. It has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. By altering the redox state of target proteins, GRX is involved in many cellular functions.
Probab=98.73 E-value=4.9e-08 Score=65.58 Aligned_cols=66 Identities=17% Similarity=0.135 Sum_probs=55.2
Q ss_pred cEEEecCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEeeCCeeeeecHHH
Q psy13748 3 LILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDGDLIVWDSHAI 70 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~~es~~I 70 (296)
++||+.+.||+|++++.+|..+||+|+.+.++- .....+++.++++.+.+|++..||..+..-...
T Consensus 3 v~ly~~~~C~~C~ka~~~L~~~gi~~~~~di~~--~~~~~~el~~~~g~~~vP~v~i~~~~iGg~~~~ 68 (73)
T cd03027 3 VTIYSRLGCEDCTAVRLFLREKGLPYVEINIDI--FPERKAELEERTGSSVVPQIFFNEKLVGGLTDL 68 (73)
T ss_pred EEEEecCCChhHHHHHHHHHHCCCceEEEECCC--CHHHHHHHHHHhCCCCcCEEEECCEEEeCHHHH
Confidence 689999999999999999999999999887763 233456788899999999999888877654443
No 119
>cd03048 GST_N_Ure2p_like GST_N family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The N-terminal TRX-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. Characterized GSTs in this subfamily include Aspergillus fumigatus GSTs 1 and 2, and
Probab=98.72 E-value=1.7e-08 Score=69.38 Aligned_cols=47 Identities=32% Similarity=0.480 Sum_probs=39.6
Q ss_pred EeeccCCCCC-CccccccCCCCCccEEEeC---CEEeeccHHHHHHHHHHhC
Q psy13748 120 CSDLYLGWIP-INFSPQLNPQHTVPTLEDG---DLIVWDSHAINAYLVSAYG 167 (296)
Q Consensus 120 ~v~~~~~~~~-~~~~~~~nP~~~vP~L~~~---g~~l~es~aI~~yl~~~~~ 167 (296)
.+++..+++. ++| .+.||.++||+|+++ |..++||.||++||+++++
T Consensus 30 ~~~~~~~~~~~~~~-~~~~p~~~vP~l~~~~~~g~~l~eS~aI~~yL~~~~~ 80 (81)
T cd03048 30 PVDISKGEQKKPEF-LKINPNGRIPAIVDHNGTPLTVFESGAILLYLAEKYD 80 (81)
T ss_pred EecCcCCcccCHHH-HHhCcCCCCCEEEeCCCCceEEEcHHHHHHHHHHHhC
Confidence 4555556555 666 899999999999976 8999999999999999876
No 120
>PF13409 GST_N_2: Glutathione S-transferase, N-terminal domain; PDB: 3C8E_B 3M1G_A 3R3E_A 3O3T_A 1RK4_A 1K0O_B 1K0N_A 3QR6_A 3SWL_A 3TGZ_B ....
Probab=98.72 E-value=1.9e-08 Score=67.01 Aligned_cols=55 Identities=25% Similarity=0.283 Sum_probs=41.2
Q ss_pred hhhhccCcceEeeccCCCCC-CccccccCCCCCccEEEe-CCEEeeccHHHHHHHHHH
Q psy13748 110 LRNIGVSKTFCSDLYLGWIP-INFSPQLNPQHTVPTLED-GDLIVWDSHAINAYLVSA 165 (296)
Q Consensus 110 ~~~~~~~~~~~v~~~~~~~~-~~~~~~~nP~~~vP~L~~-~g~~l~es~aI~~yl~~~ 165 (296)
...++++-........++.+ ++| ...||.|+||+|++ +|.+++||.+|++||+++
T Consensus 14 ~~gl~~~~~~v~~~~~~~~~~~~~-~~~~p~~~VP~L~~~~g~vi~eS~~I~~yL~~~ 70 (70)
T PF13409_consen 14 EKGLPYEIKVVPLIPKGEQKPPEF-LALNPRGKVPVLVDPDGTVINESLAILEYLEEQ 70 (70)
T ss_dssp HHTGTCEEEEEETTTTBCTTCHBH-HHHSTT-SSSEEEETTTEEEESHHHHHHHHHHT
T ss_pred HhCCCCEEEEEeeecCccccChhh-hccCcCeEEEEEEECCCCEeeCHHHHHHHHhcC
Confidence 44555554444344566666 566 99999999999996 899999999999999873
No 121
>PRK10329 glutaredoxin-like protein; Provisional
Probab=98.71 E-value=6.8e-08 Score=66.12 Aligned_cols=62 Identities=18% Similarity=0.213 Sum_probs=49.0
Q ss_pred CccEEEecCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEeeCCeeee
Q psy13748 1 MGLILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDGDLIVW 65 (296)
Q Consensus 1 M~~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~~ 65 (296)
|.++||..++||+|.+++.+|.++||+|+.+.++-.. . ..+.++.++...||+++.++..+.
T Consensus 1 ~~v~lYt~~~Cp~C~~ak~~L~~~gI~~~~idi~~~~--~-~~~~~~~~g~~~vPvv~i~~~~~~ 62 (81)
T PRK10329 1 MRITIYTRNDCVQCHATKRAMESRGFDFEMINVDRVP--E-AAETLRAQGFRQLPVVIAGDLSWS 62 (81)
T ss_pred CEEEEEeCCCCHhHHHHHHHHHHCCCceEEEECCCCH--H-HHHHHHHcCCCCcCEEEECCEEEe
Confidence 6799999999999999999999999999998887321 1 122344568889999998775443
No 122
>cd03075 GST_N_Mu GST_N family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the most abundant GSTs in human liver, skeletal muscle and brain, and are believed to provide protection against diseases inc
Probab=98.70 E-value=2.6e-08 Score=68.56 Aligned_cols=54 Identities=17% Similarity=0.033 Sum_probs=39.2
Q ss_pred hhccCcceEeeccCCCC--CCcccccc----CCCCCccEEEeCCEEeeccHHHHHHHHHHh
Q psy13748 112 NIGVSKTFCSDLYLGWI--PINFSPQL----NPQHTVPTLEDGDLIVWDSHAINAYLVSAY 166 (296)
Q Consensus 112 ~~~~~~~~~v~~~~~~~--~~~~~~~~----nP~~~vP~L~~~g~~l~es~aI~~yl~~~~ 166 (296)
.++|+. ..+++..+++ .++|+... +|+|+||+|++||..++||.||++||++++
T Consensus 23 gi~~e~-~~v~~~~~~~~~~~~~~~~~~~~~~P~g~vP~L~~~g~~l~ES~AIl~YLa~~~ 82 (82)
T cd03075 23 GEKYEE-KRYELGDAPDYDRSQWLNEKFKLGLDFPNLPYYIDGDVKLTQSNAILRYIARKH 82 (82)
T ss_pred CCCcEE-EEeccCCccccchHhhhccchhcCCcCCCCCEEEECCEEEeehHHHHHHHhhcC
Confidence 344444 4566666554 24552223 399999999999999999999999998754
No 123
>PF14497 GST_C_3: Glutathione S-transferase, C-terminal domain; PDB: 3AY8_A 2UZ8_B 1V2A_C 2HNL_A 2YV9_B 3H1N_A 3FR6_A 1Q4J_B 1PA3_B 1OKT_B ....
Probab=98.69 E-value=1.4e-08 Score=72.66 Aligned_cols=64 Identities=25% Similarity=0.473 Sum_probs=51.3
Q ss_pred cHHHHHHHHHHHHHHHHHcCCCC--CcCCCcccchhHhHHHHHHHHHhhCCCC-CCchhHHHHHHHHhc
Q psy13748 214 PEEDKLRAREALDFAEKFLQGRK--FITGDTYNIADFSIYTTASALVALVPGL-EKYPNLAKYFDLCKS 279 (296)
Q Consensus 214 ~~~~~~~~~~~l~~le~~L~~~~--~l~g~~~t~aD~~~~~~l~~~~~~~~~~-~~~p~l~~~~~~~~~ 279 (296)
.....+.+.+.+..++++|+.+. ||+|+++|+||+.+++.|...... .+ ..+|+|.+|++||++
T Consensus 33 ~~~~~~~~~~~l~~l~~~L~~~~~~~l~G~~~T~AD~~v~~~l~~~~~~--~~~~~~p~L~~w~~ri~~ 99 (99)
T PF14497_consen 33 GDFSREELPKALKILEKHLAERGGDFLVGDKPTLADIAVFGFLASLRWA--DFPKDYPNLVRWYERIEE 99 (99)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSSSSSSSSS--HHHHHHHHHHHHHHCC--HHTTTCHHHHHHHHHHHT
T ss_pred HHhhHHHHHHHHHHHHHHHHcCCCeeecCCCCCHHHHHHHHHHHHHhhc--ccccccHHHHHHHHhhcC
Confidence 44556788999999999998766 999999999999999988665532 23 589999999999974
No 124
>cd03045 GST_N_Delta_Epsilon GST_N family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites that are easily excreted. They are also implicated in protection against cellular damage by oxidative stress.
Probab=98.67 E-value=2.3e-08 Score=67.36 Aligned_cols=44 Identities=50% Similarity=0.755 Sum_probs=37.5
Q ss_pred EeeccCCCCC-CccccccCCCCCccEEEeCCEEeeccHHHHHHHHH
Q psy13748 120 CSDLYLGWIP-INFSPQLNPQHTVPTLEDGDLIVWDSHAINAYLVS 164 (296)
Q Consensus 120 ~v~~~~~~~~-~~~~~~~nP~~~vP~L~~~g~~l~es~aI~~yl~~ 164 (296)
.+++..+++. ++| .+.||.|+||+|+++|..++||.||++||++
T Consensus 30 ~i~~~~~~~~~~~~-~~~~p~~~vP~l~~~~~~l~es~aI~~yL~~ 74 (74)
T cd03045 30 EVNLMKGEHLKPEF-LKLNPQHTVPTLVDNGFVLWESHAILIYLVE 74 (74)
T ss_pred EecCccCCcCCHHH-HhhCcCCCCCEEEECCEEEEcHHHHHHHHhC
Confidence 4566566654 777 9999999999999999999999999999964
No 125
>cd00299 GST_C_family Glutathione S-transferase (GST) family, C-terminal alpha helical domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an activ
Probab=98.66 E-value=3.4e-08 Score=70.36 Aligned_cols=64 Identities=34% Similarity=0.574 Sum_probs=55.4
Q ss_pred cHHHHHHHHHHHHHHHHHcCCCCCcCCCcccchhHhHHHHHHHHHhhCCC---CCCchhHHHHHHHH
Q psy13748 214 PEEDKLRAREALDFAEKFLQGRKFITGDTYNIADFSIYTTASALVALVPG---LEKYPNLAKYFDLC 277 (296)
Q Consensus 214 ~~~~~~~~~~~l~~le~~L~~~~~l~g~~~t~aD~~~~~~l~~~~~~~~~---~~~~p~l~~~~~~~ 277 (296)
.+...+.+.+.++.+++.|++++|+.|+++|+||+.+++.+.++...+.. ...+|++.+|++++
T Consensus 34 ~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~ 100 (100)
T cd00299 34 LEEAREELAAALAALEKLLAGRPYLAGDRFSLADIALAPVLARLDLLGPLLGLLDEYPRLAAWYDRL 100 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCCCCCCcCHHHHHHHHHHHHHHHhhhhhhhhccCccHHHHHHhC
Confidence 44556788999999999999889999999999999999999988877554 57899999999875
No 126
>TIGR02182 GRXB Glutaredoxin, GrxB family. This model includes the highly abundant E. coli GrxB (Grx2) glutaredoxin which is notably longer than either GrxA or GrxC. Unlike the other two E. coli glutaredoxins, GrxB appears to be unable to reduce ribonucleotide reductase, and may have more to do with resistance to redox stress.
Probab=98.65 E-value=8.3e-08 Score=78.46 Aligned_cols=121 Identities=19% Similarity=0.097 Sum_probs=71.5
Q ss_pred cccCCCCCccEEE-eCCEEeeccHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhHHhhccchhhhHHHHhhhhhhccCCcC
Q psy13748 134 PQLNPQHTVPTLE-DGDLIVWDSHAINAYLVSAYGKNDALYPKDPKVRALVDQRLHFDSGVLFSALRNIGLKIFFKNEKE 212 (296)
Q Consensus 134 ~~~nP~~~vP~L~-~~g~~l~es~aI~~yl~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (296)
.+.||.|+||+|+ +||..++||.+|++||+++|+. +.+.|. .++++..|..+....+...+...+... ....
T Consensus 39 ~~~np~g~vP~l~~~~g~~l~es~~I~~yL~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 111 (209)
T TIGR02182 39 IRMIGAKQVPILQKDDGRAMPESLDIVAYFDKLDGE-PLLTGK---VSPEIEAWLRKVTGYANKLLLPRFAKS---DLPE 111 (209)
T ss_pred HHhcCCCCcceEEeeCCeEeccHHHHHHHHHHhCCC-ccCCCC---ChHHHHHHHHHHHHHhhhhhccccccC---CCcc
Confidence 6889999999998 8999999999999999999974 333322 456677777654433322221111100 0000
Q ss_pred C-cHHHHH------------------HHHHHHHHHHHHcCC-CCCcCCCcccchhHhHHHHHHHHHhhCC
Q psy13748 213 I-PEEDKL------------------RAREALDFAEKFLQG-RKFITGDTYNIADFSIYTTASALVALVP 262 (296)
Q Consensus 213 ~-~~~~~~------------------~~~~~l~~le~~L~~-~~~l~g~~~t~aD~~~~~~l~~~~~~~~ 262 (296)
. .....+ ...+.+..+++.|+. ..+|.+..+. +|-++++|+..+..+..
T Consensus 112 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l-~g~~TiADi~l~~~l~~ 180 (209)
T TIGR02182 112 FATQSARKYFTDKKEASAGNFSALLNHTPGLLEEINADLEELDKLIDGPNAV-NGELSEDDILVFPLLRN 180 (209)
T ss_pred cCCHHHHHHHHHHHHHhcCCHHHHHccCHHHHHHHHHHHHHHHHHHhCcccc-CCCCCHHHHHHHHHhcC
Confidence 0 000000 012344455555543 2367666565 55699999988877644
No 127
>PRK11752 putative S-transferase; Provisional
Probab=98.65 E-value=9.9e-08 Score=80.81 Aligned_cols=134 Identities=21% Similarity=0.182 Sum_probs=91.5
Q ss_pred eEeeccCCCCC-CccccccCCCCCccEEEeC----CEEeeccHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhHHhhccch
Q psy13748 119 FCSDLYLGWIP-INFSPQLNPQHTVPTLEDG----DLIVWDSHAINAYLVSAYGKNDALYPKDPKVRALVDQRLHFDSGV 193 (296)
Q Consensus 119 ~~v~~~~~~~~-~~~~~~~nP~~~vP~L~~~----g~~l~es~aI~~yl~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 193 (296)
+.|++..+++. ++| .++||.|+||+|+++ |.+++||.||++||++.++ .|.|.++.+++++.+|..+..+.
T Consensus 78 ~~v~~~~~~~~~~e~-~~iNP~GkVP~Lv~~dg~~~~~L~ES~AIl~YL~~~~~---~L~P~~~~era~v~~wl~~~~~~ 153 (264)
T PRK11752 78 WLIRIGEGDQFSSGF-VEINPNSKIPALLDRSGNPPIRVFESGAILLYLAEKFG---AFLPKDLAARTETLNWLFWQQGS 153 (264)
T ss_pred EEecCccccccCHHH-HhhCCCCCCCEEEeCCCCCCeEEEcHHHHHHHHHHhcC---CcCCCCHHHHHHHHHHHHHHhhh
Confidence 46777777765 778 999999999999964 4799999999999999986 38999999999999999876543
Q ss_pred hhhHHHHhhhhhhccCCcCCcHHHHHHHHHHHHHHHHHcCCCCCcCCCcccchhHhHHHHHHHHHhh
Q psy13748 194 LFSALRNIGLKIFFKNEKEIPEEDKLRAREALDFAEKFLQGRKFITGDTYNIADFSIYTTASALVAL 260 (296)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~g~~~t~aD~~~~~~l~~~~~~ 260 (296)
. ......+.... .......+...+.....+...-+.|+. .|.+..|.+||.++++|+..+..+
T Consensus 154 ~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~L~~le~--~L~~~~fl~Gd~~TlADi~l~~~l 216 (264)
T PRK11752 154 A-PFLGGGFGHFY-AYAPEKIEYAINRFTMEAKRQLDVLDK--QLAEHEYIAGDEYTIADIAIWPWY 216 (264)
T ss_pred h-hHHHHHHHHHH-HhCCccchHHHHHHHHHHHHHHHHHHH--HhccCCCCCCCccCHHHHHHHHHH
Confidence 2 22222222222 111221122222222223333334444 677778999999999999986654
No 128
>COG0695 GrxC Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=98.64 E-value=1.8e-07 Score=63.86 Aligned_cols=65 Identities=20% Similarity=0.153 Sum_probs=52.5
Q ss_pred CccEEEecCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHH-hhCCCccccEEeeCCeeeee
Q psy13748 1 MGLILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYL-KLNPQHTVPTLEDGDLIVWD 66 (296)
Q Consensus 1 M~~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~-~~~p~~~vP~l~~~~~~~~e 66 (296)
|++++|..++||||.+++-+|..+|++|+.+.++....+. ..+++ ..++..+||++..|+..+.-
T Consensus 1 ~~v~iyt~~~CPyC~~ak~~L~~~g~~~~~i~~~~~~~~~-~~~~~~~~~g~~tvP~I~i~~~~igg 66 (80)
T COG0695 1 ANVTIYTKPGCPYCKRAKRLLDRKGVDYEEIDVDDDEPEE-AREMVKRGKGQRTVPQIFIGGKHVGG 66 (80)
T ss_pred CCEEEEECCCCchHHHHHHHHHHcCCCcEEEEecCCcHHH-HHHHHHHhCCCCCcCEEEECCEEEeC
Confidence 5689999999999999999999999999999888654322 33444 44589999999988866553
No 129
>cd03197 GST_C_mPGES2 GST_C family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH, or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature, and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated and a C-terminal soluble domain with a GST-like structure. The C-terminus contains two structural domains a N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST active site is located in a cleft between t
Probab=98.64 E-value=2.9e-07 Score=69.68 Aligned_cols=71 Identities=14% Similarity=0.260 Sum_probs=57.6
Q ss_pred CCcCCcHHHHHHHHHHHHHHHHHcC-CCCCcCCCcccchhHhHHHHHHHHHhh-CC-CCCCchhHHHHHHHHhc
Q psy13748 209 NEKEIPEEDKLRAREALDFAEKFLQ-GRKFITGDTYNIADFSIYTTASALVAL-VP-GLEKYPNLAKYFDLCKS 279 (296)
Q Consensus 209 ~~~~~~~~~~~~~~~~l~~le~~L~-~~~~l~g~~~t~aD~~~~~~l~~~~~~-~~-~~~~~p~l~~~~~~~~~ 279 (296)
......++..+.+...++.+-+.+. +++|++|+++|+||+.+++.+..+..+ ++ ++..+|++.+|++||++
T Consensus 72 k~~~i~~D~r~~L~~a~~~w~~~~~~~~~FlaGd~ptIADisvyg~l~s~e~~~~~~Dl~~~p~I~~W~eRm~~ 145 (149)
T cd03197 72 KPRLLQDDVREWLYDALNTWVAALGKDRQFHGGSKPNLADLAVYGVLRSVEGHPAFKDMVEETKIGEWYERMDA 145 (149)
T ss_pred cccCCCchHHHHHHHHHHHHHHHhcCCCCccCCCCCCHHHHHHHHHHHHHHHhccccchhhCcCHHHHHHHHHH
Confidence 3333334556778888887766665 468999999999999999999988887 67 68899999999999986
No 130
>TIGR02196 GlrX_YruB Glutaredoxin-like protein, YruB-family. This glutaredoxin-like protein family contains the conserved CxxC motif and includes the Clostridium pasteurianum protein YruB which has been cloned from a rubredoxin operon. Somewhat related to NrdH, it is unknown whether this protein actually interacts with glutathione/glutathione reducatase, or, like NrdH, some other reductant system.
Probab=98.64 E-value=1.5e-07 Score=63.08 Aligned_cols=71 Identities=24% Similarity=0.306 Sum_probs=56.3
Q ss_pred ccEEEecCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEeeCCeee--eecHHHHHHH
Q psy13748 2 GLILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDGDLIV--WDSHAINAYL 74 (296)
Q Consensus 2 ~~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~--~es~~I~~yl 74 (296)
+++||+.++||+|++++.+|.+.|++|..+.++- ..+..+++.+.++.+.+|+|+.+|..+ .++..|.++|
T Consensus 1 ~i~lf~~~~C~~C~~~~~~l~~~~i~~~~vdi~~--~~~~~~~~~~~~~~~~vP~~~~~~~~~~g~~~~~i~~~i 73 (74)
T TIGR02196 1 KVKVYTTPWCPPCKKAKEYLTSKGIAFEEIDVEK--DSAAREEVLKVLGQRGVPVIVIGHKIIVGFDPEKLDQLL 73 (74)
T ss_pred CEEEEcCCCChhHHHHHHHHHHCCCeEEEEeccC--CHHHHHHHHHHhCCCcccEEEECCEEEeeCCHHHHHHHh
Confidence 3799999999999999999999999998876653 222345677889999999999888776 5556665554
No 131
>cd02066 GRX_family Glutaredoxin (GRX) family; composed of GRX, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known including human GRX1 and GRX2, as well as E. coli GRX1 and GRX3, which
Probab=98.63 E-value=1.8e-07 Score=62.26 Aligned_cols=69 Identities=19% Similarity=0.165 Sum_probs=58.4
Q ss_pred ccEEEecCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEeeCCeeeeecHHHHH
Q psy13748 2 GLILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDGDLIVWDSHAINA 72 (296)
Q Consensus 2 ~~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~~es~~I~~ 72 (296)
++++|+.++||+|++++.+|..+|++|+.+.++-. .....++.++++..++|++..||..+.++..|.+
T Consensus 1 ~v~ly~~~~Cp~C~~~~~~L~~~~i~~~~~di~~~--~~~~~~l~~~~~~~~~P~~~~~~~~igg~~~~~~ 69 (72)
T cd02066 1 KVVVFSKSTCPYCKRAKRLLESLGIEFEEIDILED--GELREELKELSGWPTVPQIFINGEFIGGYDDLKA 69 (72)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCCcEEEEECCCC--HHHHHHHHHHhCCCCcCEEEECCEEEecHHHHHH
Confidence 36899999999999999999999999987776532 2245677788999999999999999999887765
No 132
>cd03059 GST_N_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal TRX-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=98.63 E-value=5.5e-08 Score=65.28 Aligned_cols=38 Identities=42% Similarity=0.705 Sum_probs=34.2
Q ss_pred CCCccccccCCCCCccEEEeCCEEeeccHHHHHHHHHHh
Q psy13748 128 IPINFSPQLNPQHTVPTLEDGDLIVWDSHAINAYLVSAY 166 (296)
Q Consensus 128 ~~~~~~~~~nP~~~vP~L~~~g~~l~es~aI~~yl~~~~ 166 (296)
..++| ++.||.|+||+|+++|..++||.||++||++++
T Consensus 36 ~~~~~-~~~~p~~~vP~l~~~~~~l~es~aI~~yL~~~~ 73 (73)
T cd03059 36 PPEDL-AELNPYGTVPTLVDRDLVLYESRIIMEYLDERF 73 (73)
T ss_pred CCHHH-HhhCCCCCCCEEEECCEEEEcHHHHHHHHHhhC
Confidence 34677 899999999999999999999999999998764
No 133
>cd03202 GST_C_etherase_LigE GST_C family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=98.63 E-value=1.5e-07 Score=70.24 Aligned_cols=66 Identities=23% Similarity=0.302 Sum_probs=58.0
Q ss_pred cHHHHHHHHHHHHHHHHHcCCCCCcCCCcccchhHhHHHHHHHHHhh-CCC-CCCchhHHHHHHHHhc
Q psy13748 214 PEEDKLRAREALDFAEKFLQGRKFITGDTYNIADFSIYTTASALVAL-VPG-LEKYPNLAKYFDLCKS 279 (296)
Q Consensus 214 ~~~~~~~~~~~l~~le~~L~~~~~l~g~~~t~aD~~~~~~l~~~~~~-~~~-~~~~p~l~~~~~~~~~ 279 (296)
.+...+.+.+.++.++++|++++|+.|+++|+||+.+++.+.+.... +.. ...+|++.+|++||.+
T Consensus 56 ~~~~~~~~~~~l~~l~~~L~~~~fl~Gd~~t~AD~~l~~~l~~~~~~~~~~~~~~~p~l~~W~~r~~~ 123 (124)
T cd03202 56 REAALANFRAALEPLRATLKGQPFLGGAAPNYADYIVFGGFQWARIVSPFPLLEEDDPVYDWFERCLD 123 (124)
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCccCCCCCchhHHHHHHHHHHHHHcCcccccccCChHHHHHHHHhc
Confidence 45667789999999999999889999999999999999999887765 555 5789999999999986
No 134
>cd03053 GST_N_Phi GST_N family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Phi GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes are highly reactive toward chloroacetanilide and thiocarbamate herbicides. Some Phi GSTs have other functions including t
Probab=98.62 E-value=4e-08 Score=66.57 Aligned_cols=44 Identities=39% Similarity=0.509 Sum_probs=36.7
Q ss_pred EeeccCCCCC-CccccccCCCCCccEEEeCCEEeeccHHHHHHHHH
Q psy13748 120 CSDLYLGWIP-INFSPQLNPQHTVPTLEDGDLIVWDSHAINAYLVS 164 (296)
Q Consensus 120 ~v~~~~~~~~-~~~~~~~nP~~~vP~L~~~g~~l~es~aI~~yl~~ 164 (296)
.++...+++. ++| .+.||.|+||+|+++|..++||.||++||++
T Consensus 31 ~~~~~~~~~~~~~~-~~~~P~~~vP~l~~~g~~l~es~aI~~yL~~ 75 (76)
T cd03053 31 PVDLTKGEHKSPEH-LARNPFGQIPALEDGDLKLFESRAITRYLAE 75 (76)
T ss_pred EeCccccccCCHHH-HhhCCCCCCCEEEECCEEEEcHHHHHHHHhh
Confidence 3455555554 555 9999999999999999999999999999976
No 135
>cd03043 GST_N_1 GST_N family, unknown subfamily 1; composed of uncharacterized proteins, predominantly from bacteria, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=98.61 E-value=3.9e-08 Score=66.07 Aligned_cols=43 Identities=37% Similarity=0.602 Sum_probs=35.8
Q ss_pred EeeccCCCCCCccccccCCCCCccEEEeCCEEeeccHHHHHHHH
Q psy13748 120 CSDLYLGWIPINFSPQLNPQHTVPTLEDGDLIVWDSHAINAYLV 163 (296)
Q Consensus 120 ~v~~~~~~~~~~~~~~~nP~~~vP~L~~~g~~l~es~aI~~yl~ 163 (296)
.+++..+...++| .+.||.|+||+|+++|..++||.||++||+
T Consensus 31 ~v~~~~~~~~~~~-~~~nP~g~vP~L~~~g~~l~eS~aI~~YL~ 73 (73)
T cd03043 31 LVPLYTPDTRARI-LEFSPTGKVPVLVDGGIVVWDSLAICEYLA 73 (73)
T ss_pred EeCCCCccccHHH-HhhCCCCcCCEEEECCEEEEcHHHHHHHhC
Confidence 4455444445777 999999999999999999999999999984
No 136
>PF13417 GST_N_3: Glutathione S-transferase, N-terminal domain; PDB: 3ERG_B 3IBH_A 3ERF_A 3UBL_A 3UBK_A 3IR4_A 3M8N_B 2R4V_A 2PER_A 2R5G_A ....
Probab=98.60 E-value=6.1e-08 Score=65.51 Aligned_cols=46 Identities=33% Similarity=0.356 Sum_probs=39.4
Q ss_pred eccCCCCCCccccccCCCCCccEEEeCCEEeeccHHHHHHHHHHhCC
Q psy13748 122 DLYLGWIPINFSPQLNPQHTVPTLEDGDLIVWDSHAINAYLVSAYGK 168 (296)
Q Consensus 122 ~~~~~~~~~~~~~~~nP~~~vP~L~~~g~~l~es~aI~~yl~~~~~~ 168 (296)
++..+.+.+++ ...||.++||+|++||..++||.+|++||++.+++
T Consensus 28 ~v~~~~~~~~~-~~~~p~~~vPvL~~~g~~l~dS~~I~~yL~~~~~~ 73 (75)
T PF13417_consen 28 PVDPEEKRPEF-LKLNPKGKVPVLVDDGEVLTDSAAIIEYLEERYPG 73 (75)
T ss_dssp EEBTTSTSHHH-HHHSTTSBSSEEEETTEEEESHHHHHHHHHHHSTS
T ss_pred ccCcccchhHH-HhhcccccceEEEECCEEEeCHHHHHHHHHHHcCC
Confidence 33444445667 99999999999999999999999999999999974
No 137
>cd03061 GST_N_CLIC GST_N family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division and apoptosis. They can exist in both water-soluble and membrane-bound states, and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and it adopts a fold similar to GSTs, containing an N-terminal domain with a TRX fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. The CLI
Probab=98.60 E-value=7.1e-08 Score=67.05 Aligned_cols=41 Identities=17% Similarity=0.110 Sum_probs=36.8
Q ss_pred CCCccccccCCCCCccEEEeCCEEeeccHHHHHHHHHHhCC
Q psy13748 128 IPINFSPQLNPQHTVPTLEDGDLIVWDSHAINAYLVSAYGK 168 (296)
Q Consensus 128 ~~~~~~~~~nP~~~vP~L~~~g~~l~es~aI~~yl~~~~~~ 168 (296)
++|++|.++||.|+||+|+++|.+++||.+|++||++.+..
T Consensus 48 ~~p~~~~~~nP~g~vPvL~~~~~~i~eS~~I~eYLde~~~~ 88 (91)
T cd03061 48 RKPEDLKDLAPGTQPPFLLYNGEVKTDNNKIEEFLEETLCP 88 (91)
T ss_pred CCCHHHHHhCCCCCCCEEEECCEEecCHHHHHHHHHHHccC
Confidence 44566699999999999999999999999999999998863
No 138
>cd03047 GST_N_2 GST_N family, unknown subfamily 2; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The sequence from Burkholderia cepacia was identified as part of a gene cluster involved in the degradation of 2,4,5-trichlorophenoxyacetic acid. Some GSTs (e.g. Class Zeta and Delta) are known to catalyze dechlorination reactions.
Probab=98.59 E-value=4.4e-08 Score=65.84 Aligned_cols=42 Identities=40% Similarity=0.749 Sum_probs=35.0
Q ss_pred eeccCCCCC-CccccccCCCCCccEEEeCCEEeeccHHHHHHHH
Q psy13748 121 SDLYLGWIP-INFSPQLNPQHTVPTLEDGDLIVWDSHAINAYLV 163 (296)
Q Consensus 121 v~~~~~~~~-~~~~~~~nP~~~vP~L~~~g~~l~es~aI~~yl~ 163 (296)
++...+++. ++| .+.||.|+||+|+++|..++||.||++||+
T Consensus 31 ~~~~~~~~~~~~~-~~~nP~~~vP~L~~~~~~l~eS~aI~~YL~ 73 (73)
T cd03047 31 AGGQFGGLDTPEF-LAMNPNGRVPVLEDGDFVLWESNAILRYLA 73 (73)
T ss_pred eccccccccCHHH-HhhCCCCCCCEEEECCEEEECHHHHHHHhC
Confidence 444445544 666 899999999999999999999999999984
No 139
>cd02976 NrdH NrdH-redoxin (NrdH) family; NrdH is a small monomeric protein with a conserved redox active CXXC motif within a TRX fold, characterized by a glutaredoxin (GRX)-like sequence and TRX-like activity profile. In vitro, it displays protein disulfide reductase activity that is dependent on TRX reductase, not glutathione (GSH). It is part of the NrdHIEF operon, where NrdEF codes for class Ib ribonucleotide reductase (RNR-Ib), an efficient enzyme at low oxygen levels. Under these conditions when GSH is mostly conjugated to spermidine, NrdH can still function and act as a hydrogen donor for RNR-Ib. It has been suggested that the NrdHEF system may be the oldest RNR reducing system, capable of functioning in a microaerophilic environment, where GSH was not yet available. NrdH from Corynebacterium ammoniagenes can form domain-swapped dimers, although it is unknown if this happens in vivo. Domain-swapped dimerization, which results in the blocking of the TRX reductase binding site, cou
Probab=98.59 E-value=1.9e-07 Score=62.38 Aligned_cols=62 Identities=24% Similarity=0.190 Sum_probs=52.3
Q ss_pred cEEEecCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEeeCCeeeee
Q psy13748 3 LILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDGDLIVWD 66 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~~e 66 (296)
+++|+.++||+|.+++.+|.++|++|+.+.++.. .+..+++.+.|+.+.+|+|+.+|..+..
T Consensus 2 v~l~~~~~c~~c~~~~~~l~~~~i~~~~~~i~~~--~~~~~~~~~~~~~~~vP~i~~~~~~i~g 63 (73)
T cd02976 2 VTVYTKPDCPYCKATKRFLDERGIPFEEVDVDED--PEALEELKKLNGYRSVPVVVIGDEHLSG 63 (73)
T ss_pred EEEEeCCCChhHHHHHHHHHHCCCCeEEEeCCCC--HHHHHHHHHHcCCcccCEEEECCEEEec
Confidence 6899999999999999999999999998887642 2334678888999999999988876654
No 140
>cd03192 GST_C_Sigma_like GST_C family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi, and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition
Probab=98.59 E-value=6.8e-08 Score=69.65 Aligned_cols=64 Identities=28% Similarity=0.367 Sum_probs=53.5
Q ss_pred cHHHHHHHHHHHHHHHHHcCC--CCCcCCCcccchhHhHHHHHHHHHhhCCC--CCCchhHHHHHHHH
Q psy13748 214 PEEDKLRAREALDFAEKFLQG--RKFITGDTYNIADFSIYTTASALVALVPG--LEKYPNLAKYFDLC 277 (296)
Q Consensus 214 ~~~~~~~~~~~l~~le~~L~~--~~~l~g~~~t~aD~~~~~~l~~~~~~~~~--~~~~p~l~~~~~~~ 277 (296)
.....+.+.+.+..+++.|.+ ++|++|+++|+||+++++.+.++...+.. ...+|++.+|++++
T Consensus 37 ~~~~~~~~~~~l~~le~~l~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~~p~l~~~~~~~ 104 (104)
T cd03192 37 KEFLKEAIPKYLKKLEKILKENGGGYLVGDKLTWADLVVFDVLDYLLYLDPKLLLKKYPKLKALRERV 104 (104)
T ss_pred HHHHHHhhHHHHHHHHHHHHHcCCCeeeCCCccHHHHHHHHHHHHHHhhCchhhHHhChhHHHHHHhC
Confidence 334556788899999999987 78999999999999999999888766443 57799999999875
No 141
>cd03044 GST_N_EF1Bgamma GST_N family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal TRX-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role in prot
Probab=98.57 E-value=4.8e-08 Score=66.03 Aligned_cols=44 Identities=20% Similarity=0.218 Sum_probs=35.9
Q ss_pred EeeccCCCCCCccccccCCCCCccEEEe-CCEEeeccHHHHHHHHH
Q psy13748 120 CSDLYLGWIPINFSPQLNPQHTVPTLED-GDLIVWDSHAINAYLVS 164 (296)
Q Consensus 120 ~v~~~~~~~~~~~~~~~nP~~~vP~L~~-~g~~l~es~aI~~yl~~ 164 (296)
.+++..+...++| ++.||.|+||+|++ +|.+++||.||++||++
T Consensus 30 ~v~~~~~~~~~~~-~~~nP~~~vP~L~~~~g~~l~es~aI~~yL~~ 74 (75)
T cd03044 30 DFQPGKENKTPEF-LKKFPLGKVPAFEGADGFCLFESNAIAYYVAN 74 (75)
T ss_pred ecccccccCCHHH-HHhCCCCCCCEEEcCCCCEEeeHHHHHHHHhh
Confidence 4555545334666 99999999999995 68999999999999975
No 142
>cd03193 GST_C_Metaxin GST_C family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities. Other members are the cadmium-inducible
Probab=98.56 E-value=2.4e-07 Score=64.63 Aligned_cols=63 Identities=24% Similarity=0.376 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCcCCCcccchhHhHHHHHHHHHhhCCC-------CCCchhHHHHHHHHh
Q psy13748 216 EDKLRAREALDFAEKFLQGRKFITGDTYNIADFSIYTTASALVALVPG-------LEKYPNLAKYFDLCK 278 (296)
Q Consensus 216 ~~~~~~~~~l~~le~~L~~~~~l~g~~~t~aD~~~~~~l~~~~~~~~~-------~~~~p~l~~~~~~~~ 278 (296)
...+.+.+.++.+|+.|++++|+.|+++|++|+.+++.+.++...++. +..+|++.+|++++.
T Consensus 19 ~~~~~~~~~l~~le~~L~~~~yl~Gd~~t~aDi~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~r~~ 88 (88)
T cd03193 19 EIYSLAKKDLKALSDLLGDKKFFFGDKPTSLDATVFGHLASILYAPLPNSALQLILKEYPNLVEYCERIR 88 (88)
T ss_pred HHHHHHHHHHHHHHHHhCCCCccCCCCCCHHHHHHHHHHHHHHhcCCCChHHHHHHHhCcHHHHHHHHhC
Confidence 445678899999999999999999999999999999999877653221 367899999999874
No 143
>cd03418 GRX_GRXb_1_3_like Glutaredoxin (GRX) family, GRX bacterial class 1 and 3 (b_1_3)-like subfamily; composed of bacterial GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known i
Probab=98.53 E-value=5e-07 Score=60.92 Aligned_cols=70 Identities=17% Similarity=0.141 Sum_probs=56.0
Q ss_pred cEEEecCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCc-cccEEeeCCeeeeecHHHHHHH
Q psy13748 3 LILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQH-TVPTLEDGDLIVWDSHAINAYL 74 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~-~vP~l~~~~~~~~es~~I~~yl 74 (296)
++||+.+.||+|.+++.+|+..||+|+.+.++.. .....++.+..... .+|++..+|..+.....+.++-
T Consensus 2 i~ly~~~~Cp~C~~ak~~L~~~~i~~~~i~i~~~--~~~~~~~~~~~~~~~~vP~v~i~g~~igg~~~~~~~~ 72 (75)
T cd03418 2 VEIYTKPNCPYCVRAKALLDKKGVDYEEIDVDGD--PALREEMINRSGGRRTVPQIFIGDVHIGGCDDLYALE 72 (75)
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCcEEEEECCCC--HHHHHHHHHHhCCCCccCEEEECCEEEeChHHHHHHH
Confidence 6899999999999999999999999999888743 12224454554444 8999999999999888887763
No 144
>cd03076 GST_N_Pi GST_N family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an increase in JNK activity, thereby promoting apoptosis. GSTP1 is expressed in various tumors and is the predominant GST in a w
Probab=98.50 E-value=1.1e-07 Score=63.90 Aligned_cols=34 Identities=26% Similarity=0.246 Sum_probs=31.5
Q ss_pred CccccccCCCCCccEEEeCCEEeeccHHHHHHHHH
Q psy13748 130 INFSPQLNPQHTVPTLEDGDLIVWDSHAINAYLVS 164 (296)
Q Consensus 130 ~~~~~~~nP~~~vP~L~~~g~~l~es~aI~~yl~~ 164 (296)
+++ .+.||.|+||+|++||..++||.||++||++
T Consensus 39 ~~~-~~~~p~~~vP~l~~~~~~l~es~aI~~yL~~ 72 (73)
T cd03076 39 ESL-KPKMLFGQLPCFKDGDLTLVQSNAILRHLGR 72 (73)
T ss_pred hhh-hccCCCCCCCEEEECCEEEEcHHHHHHHHhc
Confidence 456 8999999999999999999999999999975
No 145
>cd03056 GST_N_4 GST_N family, unknown subfamily 4; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=98.50 E-value=1.1e-07 Score=63.81 Aligned_cols=43 Identities=35% Similarity=0.427 Sum_probs=35.9
Q ss_pred EeeccCCCCC-CccccccCCCCCccEEEeCCEEeeccHHHHHHHH
Q psy13748 120 CSDLYLGWIP-INFSPQLNPQHTVPTLEDGDLIVWDSHAINAYLV 163 (296)
Q Consensus 120 ~v~~~~~~~~-~~~~~~~nP~~~vP~L~~~g~~l~es~aI~~yl~ 163 (296)
.+++..+++. ++| .+.||.+++|+|+++|..++||.||++||+
T Consensus 30 ~i~~~~~~~~~~~~-~~~~p~~~vP~l~~~~~~i~es~aI~~yl~ 73 (73)
T cd03056 30 EVDILKGETRTPEF-LALNPNGEVPVLELDGRVLAESNAILVYLA 73 (73)
T ss_pred EecCCCcccCCHHH-HHhCCCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 4555556655 555 899999999999999999999999999983
No 146
>PLN02907 glutamate-tRNA ligase
Probab=98.50 E-value=2.9e-07 Score=87.49 Aligned_cols=96 Identities=14% Similarity=0.212 Sum_probs=73.1
Q ss_pred cCCCCCccEEE-eCCEEeeccHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhHHhhccchhhhHHHHhhhhhhccCCcCCc
Q psy13748 136 LNPQHTVPTLE-DGDLIVWDSHAINAYLVSAYGKNDALYPKDPKVRALVDQRLHFDSGVLFSALRNIGLKIFFKNEKEIP 214 (296)
Q Consensus 136 ~nP~~~vP~L~-~~g~~l~es~aI~~yl~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (296)
.||.|+||+|+ +||..++||.||++||++.++. ..|+|.++.+++++.+|+.+ .
T Consensus 32 ~~p~GkVPvLv~ddG~~L~ES~AIl~YLa~~~p~-~~L~p~d~~erAqV~qWL~~------------------------~ 86 (722)
T PLN02907 32 SLKSGSAPTLLFSSGEKLTGTNVLLRYIARSASL-PGFYGQDAFESSQVDEWLDY------------------------A 86 (722)
T ss_pred cCCCCCCcEEEECCCCEEECHHHHHHHHHHhCCC-cCCCCCCHHHHHHHHHHHHH------------------------H
Confidence 57999999999 6899999999999999999964 56999999999999999753 0
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCcCCCcccchhHhHHHHHHHHHhh
Q psy13748 215 EEDKLRAREALDFAEKFLQGRKFITGDTYNIADFSIYTTASALVAL 260 (296)
Q Consensus 215 ~~~~~~~~~~l~~le~~L~~~~~l~g~~~t~aD~~~~~~l~~~~~~ 260 (296)
... .....+...-+.|+. +|.+.+|.+||.++++|+..+..+
T Consensus 87 -~~~-~~~~~l~~~L~~LE~--~L~~rtYLvGd~lTLADIaL~~~L 128 (722)
T PLN02907 87 -PTF-SSGSEFENACEYVDG--YLASRTFLVGYSLTIADIAIWSGL 128 (722)
T ss_pred -hhc-ccHHHHHHHHHHHHH--HhccCCeecCCCCCHHHHHHHHHH
Confidence 111 111222222334443 787788999999999999987665
No 147
>cd03041 GST_N_2GST_N GST_N family, 2 repeats of the N-terminal domain of soluble GSTs (2 GST_N) subfamily; composed of uncharacterized proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=98.49 E-value=1.1e-07 Score=64.59 Aligned_cols=45 Identities=24% Similarity=0.268 Sum_probs=37.1
Q ss_pred eeccCCCCC-CccccccCCCCCccEEEe--CCEEeeccHHHHHHHHHHh
Q psy13748 121 SDLYLGWIP-INFSPQLNPQHTVPTLED--GDLIVWDSHAINAYLVSAY 166 (296)
Q Consensus 121 v~~~~~~~~-~~~~~~~nP~~~vP~L~~--~g~~l~es~aI~~yl~~~~ 166 (296)
++...+++. +++ .+.||.|+||+|++ +|..++||.+|++||++.|
T Consensus 30 ~~v~~~~~~~~~~-~~~~p~~~vP~l~~~~~~~~l~es~~I~~yL~~~~ 77 (77)
T cd03041 30 YPCPKGSPKRDKF-LEKGGKVQVPYLVDPNTGVQMFESADIVKYLFKTY 77 (77)
T ss_pred EECCCChHHHHHH-HHhCCCCcccEEEeCCCCeEEEcHHHHHHHHHHhC
Confidence 455566543 777 89999999999996 4789999999999998864
No 148
>cd03042 GST_N_Zeta GST_N family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates but display modest GSH peroxidase activity. They are also implicated in the detoxification of the carcinogen dichloroacetic acid by catalyzing its dechlorination to glyoxylic acid.
Probab=98.47 E-value=1.6e-07 Score=62.91 Aligned_cols=49 Identities=33% Similarity=0.312 Sum_probs=38.8
Q ss_pred hccCcceEeeccCCCCC-CccccccCCCCCccEEEeCCEEeeccHHHHHHHH
Q psy13748 113 IGVSKTFCSDLYLGWIP-INFSPQLNPQHTVPTLEDGDLIVWDSHAINAYLV 163 (296)
Q Consensus 113 ~~~~~~~~v~~~~~~~~-~~~~~~~nP~~~vP~L~~~g~~l~es~aI~~yl~ 163 (296)
++|+. ..++...+.+. ++| .+.||.++||+|+++|..++||.||++||+
T Consensus 24 i~~~~-~~~~~~~~~~~~~~~-~~~~p~~~vP~l~~~~~~l~es~aI~~yL~ 73 (73)
T cd03042 24 LDYEY-VPVNLLKGEQLSPAY-RALNPQGLVPTLVIDGLVLTQSLAIIEYLD 73 (73)
T ss_pred CCCeE-EEecCccCCcCChHH-HHhCCCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 34433 24566556554 677 999999999999999999999999999984
No 149
>PRK11200 grxA glutaredoxin 1; Provisional
Probab=98.46 E-value=1.2e-06 Score=60.58 Aligned_cols=77 Identities=14% Similarity=0.100 Sum_probs=61.8
Q ss_pred CccEEEecCCCchhHHHHHHHHH-----hCCceeEEEecccccccchHHHHhhCCC--ccccEEeeCCeeeeecHHHHHH
Q psy13748 1 MGLILHEIIASPPVRAVKLCLTE-----LGLEAEYKTCNLLAREQFSDEYLKLNPQ--HTVPTLEDGDLIVWDSHAINAY 73 (296)
Q Consensus 1 M~~~Ly~~~~s~~~~~v~~~L~~-----~gi~~~~~~i~~~~~~~~~~~~~~~~p~--~~vP~l~~~~~~~~es~~I~~y 73 (296)
|-+++|+.++||+|.+++-+|.. .|++|+.+.++-.. ....++...... ..||++..||..+.....|..+
T Consensus 1 m~v~iy~~~~C~~C~~a~~~L~~l~~~~~~i~~~~idi~~~~--~~~~el~~~~~~~~~~vP~ifi~g~~igg~~~~~~~ 78 (85)
T PRK11200 1 MFVVIFGRPGCPYCVRAKELAEKLSEERDDFDYRYVDIHAEG--ISKADLEKTVGKPVETVPQIFVDQKHIGGCTDFEAY 78 (85)
T ss_pred CEEEEEeCCCChhHHHHHHHHHhhcccccCCcEEEEECCCCh--HHHHHHHHHHCCCCCcCCEEEECCEEEcCHHHHHHH
Confidence 66999999999999999999999 89999988887421 112344444333 5899999999999999999999
Q ss_pred HHHhcC
Q psy13748 74 LVSAYG 79 (296)
Q Consensus 74 l~~~~~ 79 (296)
+.+.++
T Consensus 79 ~~~~~~ 84 (85)
T PRK11200 79 VKENLG 84 (85)
T ss_pred HHHhcc
Confidence 988764
No 150
>cd03038 GST_N_etherase_LigE GST_N family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF.
Probab=98.46 E-value=2.6e-07 Score=63.87 Aligned_cols=46 Identities=28% Similarity=0.203 Sum_probs=35.8
Q ss_pred eeccCCCCCCccccccCCCCCccEEEeC-CEEeeccHHHHHHHHHHhC
Q psy13748 121 SDLYLGWIPINFSPQLNPQHTVPTLEDG-DLIVWDSHAINAYLVSAYG 167 (296)
Q Consensus 121 v~~~~~~~~~~~~~~~nP~~~vP~L~~~-g~~l~es~aI~~yl~~~~~ 167 (296)
++.....+...++ +.||.++||+|+++ |..++||.+|++||+++|+
T Consensus 38 ~~~~~~~~~~~~~-~~~p~~~vP~L~~~~~~~l~eS~aI~~yL~~~~p 84 (84)
T cd03038 38 VEFPDIPPILGEL-TSGGFYTVPVIVDGSGEVIGDSFAIAEYLEEAYP 84 (84)
T ss_pred ecCCCcccccccc-cCCCCceeCeEEECCCCEEeCHHHHHHHHHHhCc
Confidence 3443333333443 79999999999988 8999999999999998764
No 151
>TIGR02200 GlrX_actino Glutaredoxin-like protein. This family of glutaredoxin-like proteins is limited to the Actinobacteria and contains the conserved CxxC motif.
Probab=98.45 E-value=7.7e-07 Score=60.23 Aligned_cols=70 Identities=19% Similarity=0.193 Sum_probs=53.3
Q ss_pred cEEEecCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhC-CCccccEEe-eCCeeeeec--HHHHHHH
Q psy13748 3 LILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLN-PQHTVPTLE-DGDLIVWDS--HAINAYL 74 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~-p~~~vP~l~-~~~~~~~es--~~I~~yl 74 (296)
++||+.++||+|++++.+|...|++|+.+.++- .......+.++| +...+|+++ +||..+.++ ..+..+|
T Consensus 2 v~ly~~~~C~~C~~~~~~L~~~~~~~~~idi~~--~~~~~~~~~~~~~~~~~vP~i~~~~g~~l~~~~~~~~~~~l 75 (77)
T TIGR02200 2 ITVYGTTWCGYCAQLMRTLDKLGAAYEWVDIEE--DEGAADRVVSVNNGNMTVPTVKFADGSFLTNPSAAQVKAKL 75 (77)
T ss_pred EEEEECCCChhHHHHHHHHHHcCCceEEEeCcC--CHhHHHHHHHHhCCCceeCEEEECCCeEecCCCHHHHHHHh
Confidence 689999999999999999999999998766543 333345666777 899999996 677777654 3344443
No 152
>PTZ00057 glutathione s-transferase; Provisional
Probab=98.43 E-value=7.7e-07 Score=72.52 Aligned_cols=110 Identities=18% Similarity=0.261 Sum_probs=64.8
Q ss_pred ccCCCCCccEEEeCCEEeeccHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhHHhhccchhhhHHHHhhhhhhccCCcCCc
Q psy13748 135 QLNPQHTVPTLEDGDLIVWDSHAINAYLVSAYGKNDALYPKDPKVRALVDQRLHFDSGVLFSALRNIGLKIFFKNEKEIP 214 (296)
Q Consensus 135 ~~nP~~~vP~L~~~g~~l~es~aI~~yl~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (296)
..||+|+||+|++||.+++||.||++||+++++ +.+.+..++..+ |..+.. +........ . .....
T Consensus 52 ~~nP~g~vP~L~~~~~~l~eS~AI~~YLa~~~~----~~~~~~~~~~~~--~~~~~~------~~~~~~~~~-~-~~~~~ 117 (205)
T PTZ00057 52 KDTPFEQVPILEMDNIIFAQSQAIVRYLSKKYK----ICGESELNEFYA--DMIFCG------VQDIHYKFN-N-TNLFK 117 (205)
T ss_pred CCCCCCCCCEEEECCEEEecHHHHHHHHHHHcC----CCCCCHHHHHHH--HHHHHH------HHHHHHHHh-h-hHHHH
Confidence 589999999999999999999999999999997 334454444333 322111 111111110 0 01001
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCcCCC--cccchhHhHHHHHHHHHhh
Q psy13748 215 EEDKLRAREALDFAEKFLQGRKFITGD--TYNIADFSIYTTASALVAL 260 (296)
Q Consensus 215 ~~~~~~~~~~l~~le~~L~~~~~l~g~--~~t~aD~~~~~~l~~~~~~ 260 (296)
+...+.....+...-..|++ .|.++ .+.+||.++++|+..+..+
T Consensus 118 ~~~~~~~~~~~~~~l~~le~--~L~~~~~~~l~Gd~~T~AD~~l~~~~ 163 (205)
T PTZ00057 118 QNETTFLNEELPKWSGYFEN--ILKKNHCNYFVGDNLTYADLAVFNLY 163 (205)
T ss_pred HHHHHHHHHHHHHHHHHHHH--HHHhCCCCeeeCCcccHHHHHHHHHH
Confidence 11111222333333344443 66533 6889999999999877664
No 153
>cd03058 GST_N_Tau GST_N family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropionate herbicides. In addition, Tau GSTs play important roles in intracellular signalling, biosynthesis of anthocyanin,
Probab=98.43 E-value=3.3e-07 Score=61.65 Aligned_cols=37 Identities=22% Similarity=0.284 Sum_probs=33.0
Q ss_pred CCccccccCCC-CCccEEEeCCEEeeccHHHHHHHHHHh
Q psy13748 129 PINFSPQLNPQ-HTVPTLEDGDLIVWDSHAINAYLVSAY 166 (296)
Q Consensus 129 ~~~~~~~~nP~-~~vP~L~~~g~~l~es~aI~~yl~~~~ 166 (296)
+++| .+.||. |+||+|+++|..++||.||++||++.+
T Consensus 37 ~~~~-~~~~p~~~~vP~l~~~~~~l~eS~aI~~yL~~~~ 74 (74)
T cd03058 37 SELL-LASNPVHKKIPVLLHNGKPICESLIIVEYIDEAW 74 (74)
T ss_pred CHHH-HHhCCCCCCCCEEEECCEEeehHHHHHHHHHhhC
Confidence 4666 899996 999999999999999999999998753
No 154
>cd03039 GST_N_Sigma_like GST_N family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition of platelet aggregation, bronchoconstriction, vasodilation and mediation of allergy and inflammation. Other class Sigma
Probab=98.42 E-value=2.5e-07 Score=61.94 Aligned_cols=34 Identities=26% Similarity=0.313 Sum_probs=30.9
Q ss_pred CccccccCCCCCccEEEeCCEEeeccHHHHHHHHH
Q psy13748 130 INFSPQLNPQHTVPTLEDGDLIVWDSHAINAYLVS 164 (296)
Q Consensus 130 ~~~~~~~nP~~~vP~L~~~g~~l~es~aI~~yl~~ 164 (296)
+++ .+.||.++||+|+++|..++||.||++||++
T Consensus 39 ~~~-~~~~p~~~vP~L~~~~~~l~es~aI~~yL~~ 72 (72)
T cd03039 39 LDL-KPTLPFGQLPVLEIDGKKLTQSNAILRYLAR 72 (72)
T ss_pred hhh-ccCCcCCCCCEEEECCEEEEecHHHHHHhhC
Confidence 445 8999999999999999999999999999963
No 155
>PF00462 Glutaredoxin: Glutaredoxin; InterPro: IPR002109 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. This entry represents Glutaredoxin.; GO: 0009055 electron carrier activity, 0015035 protein disulfide oxidoreductase activity, 0045454 cell redox homeostasis; PDB: 1QFN_A 1GRX_A 1EGO_A 1EGR_A 3RHC_A 3RHB_A 3IPZ_A 1NHO_A 3GX8_A 3D5J_A ....
Probab=98.41 E-value=8.4e-07 Score=57.02 Aligned_cols=60 Identities=18% Similarity=0.171 Sum_probs=49.4
Q ss_pred cEEEecCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEeeCCeee
Q psy13748 3 LILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDGDLIV 64 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~ 64 (296)
+++|+.++||+|.+++-+|..+|++|+.+.++-.. ....++.+.+...++|++..||..|
T Consensus 1 V~vy~~~~C~~C~~~~~~L~~~~i~y~~~dv~~~~--~~~~~l~~~~g~~~~P~v~i~g~~I 60 (60)
T PF00462_consen 1 VVVYTKPGCPYCKKAKEFLDEKGIPYEEVDVDEDE--EAREELKELSGVRTVPQVFIDGKFI 60 (60)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTBEEEEEEGGGSH--HHHHHHHHHHSSSSSSEEEETTEEE
T ss_pred cEEEEcCCCcCHHHHHHHHHHcCCeeeEcccccch--hHHHHHHHHcCCCccCEEEECCEEC
Confidence 58999999999999999999999999998887542 3345566666788999999888654
No 156
>TIGR02181 GRX_bact Glutaredoxin, GrxC family. This family of glutaredoxins includes the E. coli protein GrxC (Grx3) which appears to have a secondary role in reducing ribonucleotide reductase (in the absence of GrxA) possibly indicating a role in the reduction of other protein disulfides.
Probab=98.41 E-value=1.4e-06 Score=59.36 Aligned_cols=71 Identities=18% Similarity=0.133 Sum_probs=58.3
Q ss_pred cEEEecCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEeeCCeeeeecHHHHHHHH
Q psy13748 3 LILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDGDLIVWDSHAINAYLV 75 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~~es~~I~~yl~ 75 (296)
+++|+.+.||+|.+++-+|+.+|++|+.+.++... ....++.+.+....+|++..+|..+.....+..+-+
T Consensus 1 v~ly~~~~Cp~C~~a~~~L~~~~i~~~~~di~~~~--~~~~~~~~~~g~~~vP~i~i~g~~igg~~~~~~~~~ 71 (79)
T TIGR02181 1 VTIYTKPYCPYCTRAKALLSSKGVTFTEIRVDGDP--ALRDEMMQRSGRRTVPQIFIGDVHVGGCDDLYALDR 71 (79)
T ss_pred CEEEecCCChhHHHHHHHHHHcCCCcEEEEecCCH--HHHHHHHHHhCCCCcCEEEECCEEEcChHHHHHHHH
Confidence 58999999999999999999999999999887432 233556667778899999999988888777766544
No 157
>TIGR02194 GlrX_NrdH Glutaredoxin-like protein NrdH. NrdH-redoxin is a representative of a class of small redox proteins that contain a conserved CXXC motif and are characterized by a glutaredoxin-like amino acid sequence and thioredoxin-like activity profile. Unlike other the glutaredoxins to which it is most closely related, NrdH aparrently does not interact with glutathione/glutathione reductase, but rather with thioredoxin reductase to catalyze the reduction of ribonucleotide reductase.
Probab=98.40 E-value=1.1e-06 Score=58.78 Aligned_cols=57 Identities=16% Similarity=0.152 Sum_probs=44.5
Q ss_pred cEEEecCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEeeCCe
Q psy13748 3 LILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDGDL 62 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~ 62 (296)
+++|+.+.||+|++++-+|..+|++|+.+.++-.. . ..+.++.++...||+++.+|.
T Consensus 1 v~ly~~~~Cp~C~~ak~~L~~~~i~~~~~di~~~~--~-~~~~~~~~g~~~vP~v~~~g~ 57 (72)
T TIGR02194 1 ITVYSKNNCVQCKMTKKALEEHGIAFEEINIDEQP--E-AIDYVKAQGFRQVPVIVADGD 57 (72)
T ss_pred CEEEeCCCCHHHHHHHHHHHHCCCceEEEECCCCH--H-HHHHHHHcCCcccCEEEECCC
Confidence 58999999999999999999999999998886321 1 223334457779999987553
No 158
>cd03080 GST_N_Metaxin_like GST_N family, Metaxin subfamily, Metaxin-like proteins; a heterogenous group of proteins, predominantly uncharacterized, with similarity to metaxins and GSTs. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. One characterized member of this subgroup is a novel GST from Rhodococcus with toluene o-monooxygenase and gamma-glutamylcysteine synthetase activities. Also members are the cadmium-inducible lysosomal protein CDR-1 and its homologs from C. elegans, and the failed axon connections (fax) protein from Drosophila. CDR-1 is an integral membrane protein that functions to protect against cadmium toxicity and may also have a role in osmoregulation to maintain salt balance in C. ele
Probab=98.39 E-value=4.2e-07 Score=61.33 Aligned_cols=34 Identities=26% Similarity=0.336 Sum_probs=31.6
Q ss_pred cccCCCCCccEEEeCCEEeeccHHHHHHHHHHhC
Q psy13748 134 PQLNPQHTVPTLEDGDLIVWDSHAINAYLVSAYG 167 (296)
Q Consensus 134 ~~~nP~~~vP~L~~~g~~l~es~aI~~yl~~~~~ 167 (296)
.+.||.|+||+|+++|.+++||.+|++||+++|+
T Consensus 42 ~~~~p~g~vPvl~~~g~~l~eS~~I~~yL~~~~~ 75 (75)
T cd03080 42 AKRSPKGKLPFIELNGEKIADSELIIDHLEEKYG 75 (75)
T ss_pred ccCCCCCCCCEEEECCEEEcCHHHHHHHHHHHcC
Confidence 4789999999999999999999999999999874
No 159
>cd03077 GST_N_Alpha GST_N family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Alpha subfamily is composed of eukaryotic GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GSTA3-3 catalyzes the isomerization of intermediates in steroid hormone biosynthesis. GSTA4-4 preferentially catalyzes the
Probab=98.38 E-value=4.5e-07 Score=61.85 Aligned_cols=31 Identities=23% Similarity=0.327 Sum_probs=29.0
Q ss_pred CCCCCccEEEeCCEEeeccHHHHHHHHHHhC
Q psy13748 137 NPQHTVPTLEDGDLIVWDSHAINAYLVSAYG 167 (296)
Q Consensus 137 nP~~~vP~L~~~g~~l~es~aI~~yl~~~~~ 167 (296)
+|+|+||+|++||..++||.||++||+++++
T Consensus 47 ~~~g~vP~L~~~g~~l~ES~AI~~YL~~~~~ 77 (79)
T cd03077 47 LMFQQVPMVEIDGMKLVQTRAILNYIAGKYN 77 (79)
T ss_pred CCCCCCCEEEECCEEEeeHHHHHHHHHHHcC
Confidence 3799999999999999999999999999876
No 160
>cd03211 GST_C_Metaxin2 GST_C family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=98.37 E-value=5.3e-07 Score=67.37 Aligned_cols=65 Identities=12% Similarity=0.151 Sum_probs=54.9
Q ss_pred cHHHHHHHHHHHHHHHHHcCCCCCcCCCcccchhHhHHHHHHHHHhh-----CCC--CCCchhHHHHHHHHh
Q psy13748 214 PEEDKLRAREALDFAEKFLQGRKFITGDTYNIADFSIYTTASALVAL-----VPG--LEKYPNLAKYFDLCK 278 (296)
Q Consensus 214 ~~~~~~~~~~~l~~le~~L~~~~~l~g~~~t~aD~~~~~~l~~~~~~-----~~~--~~~~p~l~~~~~~~~ 278 (296)
.++..+.+++.++.++..|++++||+|+++|.+|+.+++.+..+... .+. +..+|+|.+|++||.
T Consensus 55 ~ee~~~~~~~~l~aLs~~Lg~~~~l~Gd~pT~~Da~vf~~la~~~~~~~~~~~l~~~~~~~pnL~~y~~Ri~ 126 (126)
T cd03211 55 LDQVIEEVDQCCQALSQRLGTQPYFFGDQPTELDALVFGHLFTILTTQLPNDELAEKVKKYSNLLAFCRRIE 126 (126)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCcHHHHHHHHHHHHHHhcCCCChHHHHHHHhCcHHHHHHHhcC
Confidence 45667788999999999999999999999999999999998776643 111 678899999999974
No 161
>TIGR02183 GRXA Glutaredoxin, GrxA family. This model includes the E. coli glyutaredoxin GrxA which appears to have primary responsibility for the reduction of ribonucleotide reductase.
Probab=98.33 E-value=3.4e-06 Score=58.48 Aligned_cols=75 Identities=13% Similarity=0.102 Sum_probs=57.5
Q ss_pred cEEEecCCCchhHHHHHHHHHhC-----CceeEEEecccccccchHHHHhhCCC--ccccEEeeCCeeeeecHHHHHHHH
Q psy13748 3 LILHEIIASPPVRAVKLCLTELG-----LEAEYKTCNLLAREQFSDEYLKLNPQ--HTVPTLEDGDLIVWDSHAINAYLV 75 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~g-----i~~~~~~i~~~~~~~~~~~~~~~~p~--~~vP~l~~~~~~~~es~~I~~yl~ 75 (296)
+++|+.++||+|.+++-+|...+ ++|+.+.++-. .....++...... ..||++..||..+..+..|..++.
T Consensus 2 V~vys~~~Cp~C~~ak~~L~~~~~~~~~i~~~~idi~~~--~~~~~~l~~~~g~~~~tVP~ifi~g~~igG~~dl~~~~~ 79 (86)
T TIGR02183 2 VVIFGRPGCPYCVRAKQLAEKLAIERADFEFRYIDIHAE--GISKADLEKTVGKPVETVPQIFVDEKHVGGCTDFEQLVK 79 (86)
T ss_pred EEEEeCCCCccHHHHHHHHHHhCcccCCCcEEEEECCCC--HHHHHHHHHHhCCCCCCcCeEEECCEEecCHHHHHHHHH
Confidence 58999999999999999999985 55666665521 1112344444443 689999999999999999999998
Q ss_pred HhcC
Q psy13748 76 SAYG 79 (296)
Q Consensus 76 ~~~~ 79 (296)
++++
T Consensus 80 ~~~~ 83 (86)
T TIGR02183 80 ENFD 83 (86)
T ss_pred hccc
Confidence 8765
No 162
>PRK10357 putative glutathione S-transferase; Provisional
Probab=98.33 E-value=1.5e-06 Score=70.65 Aligned_cols=126 Identities=23% Similarity=0.226 Sum_probs=85.7
Q ss_pred CccccccCCCCCccEEE-eCCEEeeccHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhHHhhccchhhhHHHHhhhhhhcc
Q psy13748 130 INFSPQLNPQHTVPTLE-DGDLIVWDSHAINAYLVSAYGKNDALYPKDPKVRALVDQRLHFDSGVLFSALRNIGLKIFFK 208 (296)
Q Consensus 130 ~~~~~~~nP~~~vP~L~-~~g~~l~es~aI~~yl~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (296)
+++ ...||.|+||+|+ ++|.+++||.||++||++.++. +.|+|.++.+++++++|..+..+..... ...+.....
T Consensus 38 ~~~-~~~nP~g~vP~L~~~~g~~l~eS~aI~~yL~~~~~~-~~l~p~~~~~~a~~~~~~~~~~~~~~~~-~~~~~~~~~- 113 (202)
T PRK10357 38 NGV-AQYNPLGKVPALVTEEGECWFDSPIIAEYIELLNVA-PAMLPRDPLAALRVRQLEALADGIMDAA-LVSVREQAR- 113 (202)
T ss_pred hhh-hhcCCccCCCeEEeCCCCeeecHHHHHHHHHHhCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhC-
Confidence 455 7789999999998 7899999999999999998863 5699999999999999987765544332 222332221
Q ss_pred CCcCCcHHHHHHHHHHHHHHHHHcCCCCCcCCCcccchhHhHHHHHHHHHhhCC
Q psy13748 209 NEKEIPEEDKLRAREALDFAEKFLQGRKFITGDTYNIADFSIYTTASALVALVP 262 (296)
Q Consensus 209 ~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~g~~~t~aD~~~~~~l~~~~~~~~ 262 (296)
......+...+.....+...-+.|+. +|.+.. .+||.++++|+..+..+.+
T Consensus 114 ~~~~~~~~~~~~~~~~l~~~l~~le~--~L~~~~-l~Gd~~t~ADi~l~~~l~~ 164 (202)
T PRK10357 114 PAAQQSEDELLRQREKINRSLDALEG--YLVDGT-LKTDTVNLATIAIACAVGY 164 (202)
T ss_pred ccccccHHHHHHHHHHHHHHHHHHHH--hhccCc-ccCCCcCHHHHHHHHHHHH
Confidence 11121222222333333333344444 676555 8999999999998877643
No 163
>cd03212 GST_C_Metaxin1_3 GST_C family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins. Mammalian metaxin (or metaxin 1) is a component of the preprotein import complex of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals.
Probab=98.32 E-value=1.7e-06 Score=65.57 Aligned_cols=66 Identities=26% Similarity=0.313 Sum_probs=55.6
Q ss_pred cHHHHHHHHHHHHHHHHHcCCCCCcCCCcccchhHhHHHHHHHHHhhCCC-------CCCchhHHHHHHHHhc
Q psy13748 214 PEEDKLRAREALDFAEKFLQGRKFITGDTYNIADFSIYTTASALVALVPG-------LEKYPNLAKYFDLCKS 279 (296)
Q Consensus 214 ~~~~~~~~~~~l~~le~~L~~~~~l~g~~~t~aD~~~~~~l~~~~~~~~~-------~~~~p~l~~~~~~~~~ 279 (296)
.++..+.+.+.++.+++.|++++|++|+++|.+|+.+++.+..+....+. +..+|+|.+|++||.+
T Consensus 62 ~~~~~~~a~~~l~~l~~~L~~~~~~~Gd~~t~~D~~~~~~l~~~~~~~~~~~~l~~~~~~~pnL~~~~~ri~~ 134 (137)
T cd03212 62 EAEIYRDAKECLNLLSQRLGESQFFFGDTPTSLDALVFGYLAPLLKAPLPNNKLQNHLKQCPNLCRFCDRILS 134 (137)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCcCCCCCCcHHHHHHHHHHHHHHhccCCChHHHHHHHHCcHHHHHHHHHHH
Confidence 44556778889999999999999999999999999999998776644332 5789999999999985
No 164
>KOG1695|consensus
Probab=98.30 E-value=1.3e-06 Score=70.14 Aligned_cols=117 Identities=21% Similarity=0.162 Sum_probs=82.4
Q ss_pred cccCCCCCccEEEeCCEEeeccHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhHHhhccchhhhHHHHhhhhhhccCCcCC
Q psy13748 134 PQLNPQHTVPTLEDGDLIVWDSHAINAYLVSAYGKNDALYPKDPKVRALVDQRLHFDSGVLFSALRNIGLKIFFKNEKEI 213 (296)
Q Consensus 134 ~~~nP~~~vP~L~~~g~~l~es~aI~~yl~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (296)
+...|+||+|+|..||..+.||.||+|||+++|+ |.|.++.+++.++...+.... .....+.........+.
T Consensus 44 K~~~pfgqlP~l~vDg~~i~QS~AI~RyLArk~g----l~Gkt~~E~a~vD~i~d~~~D----~~~~~~~~~~~~~~~g~ 115 (206)
T KOG1695|consen 44 KDKMPFGQLPVLEVDGKKLVQSRAILRYLARKFG----LAGKTEEEEAWVDMIVDQFKD----FRWEIFRQPYTAPEAGK 115 (206)
T ss_pred cccCCCCCCCEEeECCEeeccHHHHHHHHHHHhC----cCCCCHHHHHHHHHHHHhhhh----HHHHHHHHhhhhhhhcc
Confidence 5558999999999999999999999999999999 999999999999988776443 22233444433223322
Q ss_pred cHHHHHHHHHHHHHHHHHcCC-CCCcC--CCcccchhHhHHHHHHHHHhh
Q psy13748 214 PEEDKLRAREALDFAEKFLQG-RKFIT--GDTYNIADFSIYTTASALVAL 260 (296)
Q Consensus 214 ~~~~~~~~~~~l~~le~~L~~-~~~l~--g~~~t~aD~~~~~~l~~~~~~ 260 (296)
.+...+. ..+...+..+.. ...|. |..+.+||-.+++|+..+..+
T Consensus 116 ~~~~~~~--~~~Pa~~~~~~~~~~~L~~~~sgflvGd~lT~aDl~i~e~l 163 (206)
T KOG1695|consen 116 SEEELDK--LYLPAKPKYFKILEKILKKNKSGFLVGDKLTWADLVIAEHL 163 (206)
T ss_pred chhhhhh--hhccchHHHHHHHHHHHHhCCCCeeecCcccHHHHHHHHHH
Confidence 2222221 333333433332 23666 567999999999999988776
No 165
>PF14834 GST_C_4: Glutathione S-transferase, C-terminal domain; PDB: 3BBY_A.
Probab=98.29 E-value=7.2e-06 Score=58.44 Aligned_cols=107 Identities=18% Similarity=0.225 Sum_probs=72.2
Q ss_pred CHHHHHHHHhHHhhccchhhhHHHHhhhhhhccC--CcCCcHHHHHHHHHHHHHHHHHcCC-CCCcCCCcccchhHhHHH
Q psy13748 176 DPKVRALVDQRLHFDSGVLFSALRNIGLKIFFKN--EKEIPEEDKLRAREALDFAEKFLQG-RKFITGDTYNIADFSIYT 252 (296)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~le~~L~~-~~~l~g~~~t~aD~~~~~ 252 (296)
|..+|++.++...|..+.+.+.-...-....+.. ..+..+...+.+.+.+...+..|.+ ++||+|+ +|+||..+..
T Consensus 1 D~~~RArAR~vqAwlrSdf~~lR~Erpt~vvf~~~~~~pLs~~a~~~a~kL~~~a~~ll~~g~~~LFGe-wsIAD~dlA~ 79 (117)
T PF14834_consen 1 DRQERARARQVQAWLRSDFMALRQERPTNVVFRGARKPPLSEAAQAAAQKLIAVAERLLADGGPNLFGE-WSIADADLAL 79 (117)
T ss_dssp SHHHHHHHHHHHHHHHHS-HHHHHHS-THHHHS--------HHHHHHHHHHHHHHHHHTTT--SSTTSS---HHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcccHHHHhhCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhccCCCCcccc-chHHHHHHHH
Confidence 4567888888888888877765444333332222 2344566677788888888888875 7899997 9999999999
Q ss_pred HHHHHHhhCCCCCCchhHHHHHHHHhccccCccc
Q psy13748 253 TASALVALVPGLEKYPNLAKYFDLCKSSFKGISH 286 (296)
Q Consensus 253 ~l~~~~~~~~~~~~~p~l~~~~~~~~~~~p~~~~ 286 (296)
.+.++...|-.+. +.+..|.++.-+ +|++++
T Consensus 80 ml~Rl~~~gd~vP--~~l~~Ya~~qwq-rpsVQ~ 110 (117)
T PF14834_consen 80 MLNRLVTYGDPVP--ERLADYAERQWQ-RPSVQR 110 (117)
T ss_dssp HHHHHHTTT------HHHHHHHHHHHT--HHHHH
T ss_pred HHHHHHHcCCCCC--HHHHHHHHHHHC-CHHHHH
Confidence 9999988765433 689999999999 999986
No 166
>cd03205 GST_C_6 GST_C family, unknown subfamily 6; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.25 E-value=3.4e-06 Score=60.06 Aligned_cols=61 Identities=21% Similarity=0.195 Sum_probs=50.3
Q ss_pred cHHHHHHHHHHHHHHHHHcCCCCCcCCCcccchhHhHHHHHHHHHhh--CCC-CCCchhHHHHHHHH
Q psy13748 214 PEEDKLRAREALDFAEKFLQGRKFITGDTYNIADFSIYTTASALVAL--VPG-LEKYPNLAKYFDLC 277 (296)
Q Consensus 214 ~~~~~~~~~~~l~~le~~L~~~~~l~g~~~t~aD~~~~~~l~~~~~~--~~~-~~~~p~l~~~~~~~ 277 (296)
.+.....+.+.+..+|++|++++| +++|+||+.+++.+.++... +.. ...+|+|.+|+++|
T Consensus 35 ~~~~~~~~~~~l~~le~~L~~~~~---d~~TlADi~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~rm 98 (98)
T cd03205 35 LERQRGKIERALDALEAELAKLPL---DPLDLADIAVACALGYLDFRHPDLDWRAAHPALAAWYARF 98 (98)
T ss_pred HHHHHHHHHHHHHHHHHhhhhCCC---CCCCHHHHHHHHHHHHHHhHccCcchhhhChHHHHHHHhC
Confidence 445667888999999999988788 78999999999999877644 333 47899999999885
No 167
>cd03051 GST_N_GTT2_like GST_N family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensitivity to heat shock.
Probab=98.25 E-value=9e-07 Score=59.35 Aligned_cols=49 Identities=39% Similarity=0.435 Sum_probs=37.8
Q ss_pred hccCcceEeeccCCCCC-CccccccCCCCCccEEE-eCCEEeeccHHHHHHHH
Q psy13748 113 IGVSKTFCSDLYLGWIP-INFSPQLNPQHTVPTLE-DGDLIVWDSHAINAYLV 163 (296)
Q Consensus 113 ~~~~~~~~v~~~~~~~~-~~~~~~~nP~~~vP~L~-~~g~~l~es~aI~~yl~ 163 (296)
++|+.. .++...+++. +++ .+.||.++||+|+ +||..++||.||++||+
T Consensus 24 l~~~~~-~v~~~~~~~~~~~~-~~~~p~~~vP~l~~~~~~~l~es~aI~~yLe 74 (74)
T cd03051 24 IDVPLV-TVDLAAGEQRSPEF-LAKNPAGTVPVLELDDGTVITESVAICRYLE 74 (74)
T ss_pred CCceEE-EeecccCccCCHHH-HhhCCCCCCCEEEeCCCCEEecHHHHHHHhC
Confidence 344432 3565555544 666 9999999999999 68899999999999984
No 168
>cd03060 GST_N_Omega_like GST_N family, Omega-like subfamily; composed of uncharacterized proteins with similarity to class Omega GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. Like Omega enzymes, proteins in this subfamily contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a r
Probab=98.24 E-value=1.2e-06 Score=58.45 Aligned_cols=33 Identities=24% Similarity=0.342 Sum_probs=29.6
Q ss_pred CCccccccCCCCCccEEEe-CCEEeeccHHHHHHH
Q psy13748 129 PINFSPQLNPQHTVPTLED-GDLIVWDSHAINAYL 162 (296)
Q Consensus 129 ~~~~~~~~nP~~~vP~L~~-~g~~l~es~aI~~yl 162 (296)
+++| .+.||.|+||+|++ ||..++||.||++|+
T Consensus 37 ~~~~-~~~np~~~vP~L~~~~g~~l~eS~aI~~y~ 70 (71)
T cd03060 37 PAEM-LAASPKGTVPVLVLGNGTVIEESLDIMRWA 70 (71)
T ss_pred CHHH-HHHCCCCCCCEEEECCCcEEecHHHHHHhh
Confidence 3566 89999999999996 599999999999996
No 169
>cd03049 GST_N_3 GST_N family, unknown subfamily 3; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=98.22 E-value=1.1e-06 Score=58.83 Aligned_cols=35 Identities=29% Similarity=0.404 Sum_probs=31.0
Q ss_pred CCCccccccCCCCCccEEE-eCCEEeeccHHHHHHHH
Q psy13748 128 IPINFSPQLNPQHTVPTLE-DGDLIVWDSHAINAYLV 163 (296)
Q Consensus 128 ~~~~~~~~~nP~~~vP~L~-~~g~~l~es~aI~~yl~ 163 (296)
+.++| .+.||.++||+|+ +||..++||.||++||+
T Consensus 38 ~~~~~-~~~~p~~~vP~l~~~~g~~l~es~aI~~yLe 73 (73)
T cd03049 38 DDESL-LAVNPLGKIPALVLDDGEALFDSRVICEYLD 73 (73)
T ss_pred CChHH-HHhCCCCCCCEEEECCCCEEECHHHHHhhhC
Confidence 34677 8999999999998 68899999999999984
No 170
>cd03419 GRX_GRXh_1_2_like Glutaredoxin (GRX) family, GRX human class 1 and 2 (h_1_2)-like subfamily; composed of proteins similar to human GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes
Probab=98.20 E-value=8.4e-06 Score=55.84 Aligned_cols=74 Identities=20% Similarity=0.219 Sum_probs=60.3
Q ss_pred cEEEecCCCchhHHHHHHHHHhCCceeEEEeccccc-ccchHHHHhhCCCccccEEeeCCeeeeecHHHHHHHHH
Q psy13748 3 LILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAR-EQFSDEYLKLNPQHTVPTLEDGDLIVWDSHAINAYLVS 76 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~-~~~~~~~~~~~p~~~vP~l~~~~~~~~es~~I~~yl~~ 76 (296)
+++|+.++||+|.+++-+|...+++|+...++.... ......+.+.+....+|++..+|..+.....|..+..+
T Consensus 2 v~~y~~~~Cp~C~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~~~P~v~~~g~~igg~~~~~~~~~~ 76 (82)
T cd03419 2 VVVFSKSYCPYCKRAKSLLKELGVKPAVVELDQHEDGSEIQDYLQELTGQRTVPNVFIGGKFIGGCDDLMALHKS 76 (82)
T ss_pred EEEEEcCCCHHHHHHHHHHHHcCCCcEEEEEeCCCChHHHHHHHHHHhCCCCCCeEEECCEEEcCHHHHHHHHHc
Confidence 689999999999999999999999999888876432 11123445667778999999999999999998887654
No 171
>TIGR02189 GlrX-like_plant Glutaredoxin-like family. This family of glutaredoxin-like proteins is aparrently limited to plants. Multiple isoforms are found in A. thaliana and O.sativa.
Probab=98.18 E-value=9.6e-06 Score=57.76 Aligned_cols=72 Identities=15% Similarity=0.172 Sum_probs=56.1
Q ss_pred ccEEEecCCCchhHHHHHHHHHhCCceeEEEeccccc-ccchHHHHhhCCCccccEEeeCCeeeeecHHHHHH
Q psy13748 2 GLILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAR-EQFSDEYLKLNPQHTVPTLEDGDLIVWDSHAINAY 73 (296)
Q Consensus 2 ~~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~-~~~~~~~~~~~p~~~vP~l~~~~~~~~es~~I~~y 73 (296)
++++|..++||+|.+++-+|...|++|+.+.++-... ......+.+.+...++|.+..+|..+.....+...
T Consensus 9 ~Vvvysk~~Cp~C~~ak~~L~~~~i~~~~vdid~~~~~~~~~~~l~~~tg~~tvP~Vfi~g~~iGG~ddl~~l 81 (99)
T TIGR02189 9 AVVIFSRSSCCMCHVVKRLLLTLGVNPAVHEIDKEPAGKDIENALSRLGCSPAVPAVFVGGKLVGGLENVMAL 81 (99)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCCCCEEEEcCCCccHHHHHHHHHHhcCCCCcCeEEECCEEEcCHHHHHHH
Confidence 4899999999999999999999999999988874321 11123345667788999999988888877666553
No 172
>KOG4420|consensus
Probab=98.16 E-value=6.7e-06 Score=66.71 Aligned_cols=58 Identities=28% Similarity=0.355 Sum_probs=52.1
Q ss_pred ceEeeccCCCCCCccccccCCCCCccEEEeCCEEeeccHHHHHHHHHHhCCCCCCCCC
Q psy13748 118 TFCSDLYLGWIPINFSPQLNPQHTVPTLEDGDLIVWDSHAINAYLVSAYGKNDALYPK 175 (296)
Q Consensus 118 ~~~v~~~~~~~~~~~~~~~nP~~~vP~L~~~g~~l~es~aI~~yl~~~~~~~~~l~~~ 175 (296)
..-|++-.|+|...||...||.|.||||+++...+.++.-|++|+.++|.++..|.|.
T Consensus 54 ~y~V~l~~geh~epwFmrlNp~gevPVl~~g~~II~d~tqIIdYvErtf~ger~l~pe 111 (325)
T KOG4420|consen 54 EYDVSLPQGEHKEPWFMRLNPGGEVPVLIHGDNIISDYTQIIDYVERTFTGERVLMPE 111 (325)
T ss_pred eeeccCccccccCchheecCCCCCCceEecCCeecccHHHHHHHHHHhhccccccccc
Confidence 3458899999985555999999999999999999999999999999999887778885
No 173
>PRK10387 glutaredoxin 2; Provisional
Probab=98.16 E-value=2.9e-06 Score=69.33 Aligned_cols=122 Identities=16% Similarity=0.045 Sum_probs=75.7
Q ss_pred cccCCCCCccEEE-eCCEEeeccHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhHHhhccchhhhHHHHhhhhhhccCCcC
Q psy13748 134 PQLNPQHTVPTLE-DGDLIVWDSHAINAYLVSAYGKNDALYPKDPKVRALVDQRLHFDSGVLFSALRNIGLKIFFKNEKE 212 (296)
Q Consensus 134 ~~~nP~~~vP~L~-~~g~~l~es~aI~~yl~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (296)
.+.||.|+||+|+ +||.+++||.||++||+++|+. +.+. ..+++.+..|..+....+...+...+...... ..
T Consensus 40 ~~~~p~~~VPvL~~~~g~~l~eS~aI~~yL~~~~~~-~~l~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 113 (210)
T PRK10387 40 IRMIGQKQVPILQKDDGSYMPESLDIVHYIDELDGK-PLLT---GKRSPAIEEWLRKVFGYLNKLLYPRFAKADLP--EF 113 (210)
T ss_pred HHhcCCcccceEEecCCeEecCHHHHHHHHHHhCCC-ccCC---CcccHHHHHHHHHHHHHhhcchhcccccCCCc--cc
Confidence 4689999999995 8999999999999999999974 3333 12567888888765433332221111110000 00
Q ss_pred CcHHH------------------HHHHHHHHHHHHHHcCC-CCCcCCCcccchhHhHHHHHHHHHhhCC
Q psy13748 213 IPEED------------------KLRAREALDFAEKFLQG-RKFITGDTYNIADFSIYTTASALVALVP 262 (296)
Q Consensus 213 ~~~~~------------------~~~~~~~l~~le~~L~~-~~~l~g~~~t~aD~~~~~~l~~~~~~~~ 262 (296)
..+.. .+........+++.|+. ..+|.+ .+.+||.++++|+..+..+.+
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~-~~l~G~~~s~ADi~l~~~l~~ 181 (210)
T PRK10387 114 ATPSARQYFIDKKEASIGDFDALLAHTPGLIKEINADLRALDPLIVK-PNAVNGELSTDDIHLFPILRN 181 (210)
T ss_pred CCHHHHHHHHHhHHhccCCHHHHHhcCHHHHHHHHHHHHHHHHHhcC-ccccCCCCCHHHHHHHHHHhc
Confidence 00111 01112334455555542 236765 899999999999998887755
No 174
>PHA03050 glutaredoxin; Provisional
Probab=98.12 E-value=1.4e-05 Score=57.73 Aligned_cols=70 Identities=13% Similarity=0.147 Sum_probs=56.0
Q ss_pred cEEEecCCCchhHHHHHHHHHhCC---ceeEEEecccc-cccchHHHHhhCCCccccEEeeCCeeeeecHHHHH
Q psy13748 3 LILHEIIASPPVRAVKLCLTELGL---EAEYKTCNLLA-REQFSDEYLKLNPQHTVPTLEDGDLIVWDSHAINA 72 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~gi---~~~~~~i~~~~-~~~~~~~~~~~~p~~~vP~l~~~~~~~~es~~I~~ 72 (296)
+++|..++||||.+++-+|...|+ +|+.+.++-.. +.....++.+.+...+||.+..||..+.....+..
T Consensus 15 V~vys~~~CPyC~~ak~~L~~~~i~~~~~~~i~i~~~~~~~~~~~~l~~~tG~~tVP~IfI~g~~iGG~ddl~~ 88 (108)
T PHA03050 15 VTIFVKFTCPFCRNALDILNKFSFKRGAYEIVDIKEFKPENELRDYFEQITGGRTVPRIFFGKTSIGGYSDLLE 88 (108)
T ss_pred EEEEECCCChHHHHHHHHHHHcCCCcCCcEEEECCCCCCCHHHHHHHHHHcCCCCcCEEEECCEEEeChHHHHH
Confidence 789999999999999999999999 78888877321 12234567778888899999998888877666655
No 175
>cd03079 GST_N_Metaxin2 GST_N family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=98.06 E-value=4.6e-06 Score=55.59 Aligned_cols=30 Identities=23% Similarity=0.384 Sum_probs=27.5
Q ss_pred ccCCCCCccEEEeCCEEeeccHHHHHHHHH
Q psy13748 135 QLNPQHTVPTLEDGDLIVWDSHAINAYLVS 164 (296)
Q Consensus 135 ~~nP~~~vP~L~~~g~~l~es~aI~~yl~~ 164 (296)
..+|.|+||+|++||.+++||.||+.||++
T Consensus 44 ~~~P~GkVP~L~~dg~vI~eS~aIl~yL~~ 73 (74)
T cd03079 44 FMSPSGKVPFIRVGNQIVSEFGPIVQFVEA 73 (74)
T ss_pred ccCCCCcccEEEECCEEEeCHHHHHHHHhc
Confidence 367889999999999999999999999975
No 176
>cd03055 GST_N_Omega GST_N family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a redox active residue capable of reducing GSH mixed disulfides in a monothiol mechanism. Polymorphisms of the class Omega
Probab=97.99 E-value=6.5e-06 Score=57.50 Aligned_cols=33 Identities=39% Similarity=0.477 Sum_probs=29.5
Q ss_pred CccccccCCCCCccEEEeC-CEEeeccHHHHHHHH
Q psy13748 130 INFSPQLNPQHTVPTLEDG-DLIVWDSHAINAYLV 163 (296)
Q Consensus 130 ~~~~~~~nP~~~vP~L~~~-g~~l~es~aI~~yl~ 163 (296)
+++ .+.||.++||+|+++ |..++||.||++||+
T Consensus 56 ~~~-~~~np~~~vPvL~~~~g~~l~eS~aI~~yLe 89 (89)
T cd03055 56 DWF-LEKNPQGKVPALEIDEGKVVYESLIICEYLD 89 (89)
T ss_pred HHH-HhhCCCCCcCEEEECCCCEEECHHHHHHhhC
Confidence 446 899999999999965 899999999999984
No 177
>TIGR02180 GRX_euk Glutaredoxin. This model represents eukaryotic glutaredoxins and includes sequences from fungi, plants and metazoans as well as viruses.
Probab=97.96 E-value=4.9e-05 Score=52.19 Aligned_cols=74 Identities=18% Similarity=0.190 Sum_probs=57.7
Q ss_pred cEEEecCCCchhHHHHHHHHHhCCc--eeEEEeccccc-ccchHHHHhhCCCccccEEeeCCeeeeecHHHHHHHHH
Q psy13748 3 LILHEIIASPPVRAVKLCLTELGLE--AEYKTCNLLAR-EQFSDEYLKLNPQHTVPTLEDGDLIVWDSHAINAYLVS 76 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~gi~--~~~~~i~~~~~-~~~~~~~~~~~p~~~vP~l~~~~~~~~es~~I~~yl~~ 76 (296)
+++|+.++||+|.+++-+|...+++ |+...++.... +.....+.+......+|++..||..+..+..+.++..+
T Consensus 1 V~~f~~~~Cp~C~~~~~~L~~~~i~~~~~~~~v~~~~~~~~~~~~l~~~~g~~~vP~v~i~g~~igg~~~~~~~~~~ 77 (84)
T TIGR02180 1 VVVFSKSYCPYCKKAKEILAKLNVKPAYEVVELDQLSNGSEIQDYLEEITGQRTVPNIFINGKFIGGCSDLLALYKS 77 (84)
T ss_pred CEEEECCCChhHHHHHHHHHHcCCCCCCEEEEeeCCCChHHHHHHHHHHhCCCCCCeEEECCEEEcCHHHHHHHHHc
Confidence 5799999999999999999999999 88887775321 11112344566777999999999999998888877653
No 178
>TIGR00365 monothiol glutaredoxin, Grx4 family. The gene for the member of this glutaredoxin family in E. coli, originally designated ydhD, is now designated grxD. Its protein, Grx4, is a monothiol glutaredoxin similar to Grx5 of yeast, which is involved in iron-sulfur cluster formation.
Probab=97.89 E-value=8e-05 Score=52.79 Aligned_cols=69 Identities=13% Similarity=0.017 Sum_probs=53.0
Q ss_pred cEEEec-----CCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEeeCCeeeeecHHHHHH
Q psy13748 3 LILHEI-----IASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDGDLIVWDSHAINAY 73 (296)
Q Consensus 3 ~~Ly~~-----~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~~es~~I~~y 73 (296)
+.+|.- +.||+|.+++-+|...||+|+.+.++- .........+.+...+||.+..||..+.....+...
T Consensus 14 Vvvf~kg~~~~~~Cp~C~~ak~lL~~~~i~~~~~di~~--~~~~~~~l~~~tg~~tvP~vfi~g~~iGG~ddl~~l 87 (97)
T TIGR00365 14 VVLYMKGTPQFPQCGFSARAVQILKACGVPFAYVNVLE--DPEIRQGIKEYSNWPTIPQLYVKGEFVGGCDIIMEM 87 (97)
T ss_pred EEEEEccCCCCCCCchHHHHHHHHHHcCCCEEEEECCC--CHHHHHHHHHHhCCCCCCEEEECCEEEeChHHHHHH
Confidence 567754 889999999999999999999877742 223334555677778999999999888776666653
No 179
>PF10568 Tom37: Outer mitochondrial membrane transport complex protein; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=97.89 E-value=7.3e-05 Score=49.64 Aligned_cols=55 Identities=29% Similarity=0.276 Sum_probs=48.0
Q ss_pred CCchhHHHHHHHHHhCCc---eeEEEecccccccchHHHHhhCCCccccEEee-CCeeeeecHHHHHHH
Q psy13748 10 ASPPVRAVKLCLTELGLE---AEYKTCNLLAREQFSDEYLKLNPQHTVPTLED-GDLIVWDSHAINAYL 74 (296)
Q Consensus 10 ~s~~~~~v~~~L~~~gi~---~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~-~~~~~~es~~I~~yl 74 (296)
.+|.|.++.++|+..+.+ |+.+..+- + .++|.|++|+|.+ ++..+.+-..|++||
T Consensus 13 id~ecLa~~~yl~~~~~~~~~~~vv~s~n-------~---~~Sptg~LP~L~~~~~~~vsg~~~Iv~yL 71 (72)
T PF10568_consen 13 IDPECLAVIAYLKFAGAPEQQFKVVPSNN-------P---WLSPTGELPALIDSGGTWVSGFRNIVEYL 71 (72)
T ss_pred cCHHHHHHHHHHHhCCCCCceEEEEEcCC-------C---CcCCCCCCCEEEECCCcEEECHHHHHHhh
Confidence 588899999999999999 77776542 1 2789999999998 999999999999997
No 180
>cd03028 GRX_PICOT_like Glutaredoxin (GRX) family, PKC-interacting cousin of TRX (PICOT)-like subfamily; composed of PICOT and GRX-PICOT-like proteins. The non-PICOT members of this family contain only the GRX-like domain, whereas PICOT contains an N-terminal TRX-like domain followed by one to three GRX-like domains. It is interesting to note that PICOT from plants contain three repeats of the GRX-like domain, metazoan proteins (except for insect) have two repeats, while fungal sequences contain only one copy of the domain. PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli. Both GRX and TRX domains of PICOT are required for its activity. Characterized non-PICOT members of this family include CXIP1, a CAX-interacting protein
Probab=97.87 E-value=9.9e-05 Score=51.59 Aligned_cols=70 Identities=16% Similarity=0.058 Sum_probs=55.4
Q ss_pred ccEEEec-----CCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEeeCCeeeeecHHHHHH
Q psy13748 2 GLILHEI-----IASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDGDLIVWDSHAINAY 73 (296)
Q Consensus 2 ~~~Ly~~-----~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~~es~~I~~y 73 (296)
++++|.. ++||+|.+++-+|...|++|+.+.++-. .....+..+.+...++|.+..||..+.....+...
T Consensus 9 ~vvvf~k~~~~~~~Cp~C~~ak~~L~~~~i~y~~idv~~~--~~~~~~l~~~~g~~tvP~vfi~g~~iGG~~~l~~l 83 (90)
T cd03028 9 PVVLFMKGTPEEPRCGFSRKVVQILNQLGVDFGTFDILED--EEVRQGLKEYSNWPTFPQLYVNGELVGGCDIVKEM 83 (90)
T ss_pred CEEEEEcCCCCCCCCcHHHHHHHHHHHcCCCeEEEEcCCC--HHHHHHHHHHhCCCCCCEEEECCEEEeCHHHHHHH
Confidence 3677754 6999999999999999999999887632 23345556677788999999999888887777764
No 181
>cd03037 GST_N_GRX2 GST_N family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD, compared with other GRXs which are 9-12kD in size. GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=97.85 E-value=1.2e-05 Score=53.45 Aligned_cols=31 Identities=23% Similarity=0.275 Sum_probs=27.6
Q ss_pred cccCCCCCccEEEeC-CEEeeccHHHHHHHHH
Q psy13748 134 PQLNPQHTVPTLEDG-DLIVWDSHAINAYLVS 164 (296)
Q Consensus 134 ~~~nP~~~vP~L~~~-g~~l~es~aI~~yl~~ 164 (296)
.+.||.++||+|+++ |..++||.+|++||++
T Consensus 40 ~~~~~~~~vP~L~~~~~~~l~es~aI~~yL~~ 71 (71)
T cd03037 40 IRMIGAKQVPILEKDDGSFMAESLDIVAFIDE 71 (71)
T ss_pred HHhcCCCccCEEEeCCCeEeehHHHHHHHHhC
Confidence 567999999999965 8999999999999963
No 182
>cd03054 GST_N_Metaxin GST_N family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities.
Probab=97.84 E-value=1.9e-05 Score=52.65 Aligned_cols=30 Identities=30% Similarity=0.296 Sum_probs=28.1
Q ss_pred ccCCCCCccEEEeCCEEeeccHHHHHHHHH
Q psy13748 135 QLNPQHTVPTLEDGDLIVWDSHAINAYLVS 164 (296)
Q Consensus 135 ~~nP~~~vP~L~~~g~~l~es~aI~~yl~~ 164 (296)
..||.|+||+|+++|..++||.+|++||++
T Consensus 42 ~~~p~g~vP~l~~~g~~l~es~~I~~yL~~ 71 (72)
T cd03054 42 WRSPTGKLPFLELNGEKIADSEKIIEYLKK 71 (72)
T ss_pred ccCCCcccCEEEECCEEEcCHHHHHHHHhh
Confidence 378999999999999999999999999976
No 183
>cd03040 GST_N_mPGES2 GST_N family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated, and a C-terminal soluble domain with a GST-like structure.
Probab=97.81 E-value=2.4e-05 Score=52.93 Aligned_cols=32 Identities=22% Similarity=0.177 Sum_probs=28.2
Q ss_pred ccCCCCCccEEEeC----CEEeeccHHHHHHHHHHh
Q psy13748 135 QLNPQHTVPTLEDG----DLIVWDSHAINAYLVSAY 166 (296)
Q Consensus 135 ~~nP~~~vP~L~~~----g~~l~es~aI~~yl~~~~ 166 (296)
..||.++||+|+++ |.+++||.+|++||++..
T Consensus 41 ~~~~~~~vP~l~~~~~~~~~~l~eS~~I~~yL~~~~ 76 (77)
T cd03040 41 KWSSYKKVPILRVESGGDGQQLVDSSVIISTLKTYL 76 (77)
T ss_pred HHhCCCccCEEEECCCCCccEEEcHHHHHHHHHHHc
Confidence 45899999999954 789999999999999864
No 184
>cd00570 GST_N_family Glutathione S-transferase (GST) family, N-terminal domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK subfamily, a member of the DsbA family). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical doma
Probab=97.56 E-value=6.9e-05 Score=49.05 Aligned_cols=30 Identities=50% Similarity=0.708 Sum_probs=28.3
Q ss_pred cccCCCCCccEEEeCCEEeeccHHHHHHHH
Q psy13748 134 PQLNPQHTVPTLEDGDLIVWDSHAINAYLV 163 (296)
Q Consensus 134 ~~~nP~~~vP~L~~~g~~l~es~aI~~yl~ 163 (296)
.+.+|.+++|+|+++|..++||.+|++||+
T Consensus 42 ~~~~~~~~~P~l~~~~~~~~es~~I~~yl~ 71 (71)
T cd00570 42 LALNPLGKVPVLEDGGLVLTESLAILEYLA 71 (71)
T ss_pred HhcCCCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 789999999999999999999999999983
No 185
>PRK12759 bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta; Provisional
Probab=97.40 E-value=0.00058 Score=61.49 Aligned_cols=69 Identities=14% Similarity=0.089 Sum_probs=51.9
Q ss_pred Cc-cEEEecCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHH-h--------hCCCccccEEeeCCeeeeecHHH
Q psy13748 1 MG-LILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYL-K--------LNPQHTVPTLEDGDLIVWDSHAI 70 (296)
Q Consensus 1 M~-~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~-~--------~~p~~~vP~l~~~~~~~~es~~I 70 (296)
|. +++|..++||+|.++.-+|..+||+|+.+.|+- ... ..++. . .+....||++..||..+..-..+
T Consensus 1 m~~V~vys~~~Cp~C~~aK~~L~~~gi~~~~idi~~--~~~-~~~~~~~~~~~~~~~~~g~~tvP~ifi~~~~igGf~~l 77 (410)
T PRK12759 1 MVEVRIYTKTNCPFCDLAKSWFGANDIPFTQISLDD--DVK-RAEFYAEVNKNILLVEEHIRTVPQIFVGDVHIGGYDNL 77 (410)
T ss_pred CCcEEEEeCCCCHHHHHHHHHHHHCCCCeEEEECCC--Chh-HHHHHHHHhhccccccCCCCccCeEEECCEEEeCchHH
Confidence 66 999999999999999999999999999988872 111 12222 2 24566899999888877766555
Q ss_pred HH
Q psy13748 71 NA 72 (296)
Q Consensus 71 ~~ 72 (296)
..
T Consensus 78 ~~ 79 (410)
T PRK12759 78 MA 79 (410)
T ss_pred HH
Confidence 44
No 186
>cd03031 GRX_GRX_like Glutaredoxin (GRX) family, GRX-like domain containing protein subfamily; composed of uncharacterized eukaryotic proteins containing a GRX-like domain having only one conserved cysteine, aligning to the C-terminal cysteine of the CXXC motif of GRXs. This subfamily is predominantly composed of plant proteins. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins via a redox active CXXC motif using a similar dithiol mechanism employed by TRXs. GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. Proteins containing only the C-terminal cysteine are generally redox inactive.
Probab=97.33 E-value=0.0012 Score=50.41 Aligned_cols=69 Identities=10% Similarity=0.119 Sum_probs=54.6
Q ss_pred cEEEecC------CCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCC----ccccEEeeCCeeeeecHHHHH
Q psy13748 3 LILHEII------ASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQ----HTVPTLEDGDLIVWDSHAINA 72 (296)
Q Consensus 3 ~~Ly~~~------~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~----~~vP~l~~~~~~~~es~~I~~ 72 (296)
++||..+ ++|+|.+++.+|+..||+|+.+.|+... ....+..+.... ..+|.+..+|..|.....+.+
T Consensus 2 VvlYttsl~giR~t~~~C~~ak~iL~~~~V~~~e~DVs~~~--~~~~EL~~~~g~~~~~~tvPqVFI~G~~IGG~del~~ 79 (147)
T cd03031 2 VVLYTTSLRGVRKTFEDCNNVRAILESFRVKFDERDVSMDS--GFREELRELLGAELKAVSLPRVFVDGRYLGGAEEVLR 79 (147)
T ss_pred EEEEEcCCcCCCCcChhHHHHHHHHHHCCCcEEEEECCCCH--HHHHHHHHHhCCCCCCCCCCEEEECCEEEecHHHHHH
Confidence 6899999 8999999999999999999998887532 223445555443 789999999998888877776
Q ss_pred H
Q psy13748 73 Y 73 (296)
Q Consensus 73 y 73 (296)
.
T Consensus 80 L 80 (147)
T cd03031 80 L 80 (147)
T ss_pred H
Confidence 4
No 187
>PRK01655 spxA transcriptional regulator Spx; Reviewed
Probab=96.86 E-value=0.0015 Score=49.00 Aligned_cols=32 Identities=16% Similarity=0.102 Sum_probs=30.3
Q ss_pred cEEEecCCCchhHHHHHHHHHhCCceeEEEec
Q psy13748 3 LILHEIIASPPVRAVKLCLTELGLEAEYKTCN 34 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~ 34 (296)
+++|+.+.|++|++++-+|..+||+|+.+.+.
T Consensus 2 i~iY~~~~C~~C~ka~~~L~~~gi~~~~idi~ 33 (131)
T PRK01655 2 VTLFTSPSCTSCRKAKAWLEEHDIPFTERNIF 33 (131)
T ss_pred EEEEeCCCChHHHHHHHHHHHcCCCcEEeecc
Confidence 89999999999999999999999999988874
No 188
>COG1393 ArsC Arsenate reductase and related proteins, glutaredoxin family [Inorganic ion transport and metabolism]
Probab=96.84 E-value=0.0017 Score=47.54 Aligned_cols=34 Identities=18% Similarity=0.135 Sum_probs=31.5
Q ss_pred CccEEEecCCCchhHHHHHHHHHhCCceeEEEec
Q psy13748 1 MGLILHEIIASPPVRAVKLCLTELGLEAEYKTCN 34 (296)
Q Consensus 1 M~~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~ 34 (296)
||+++|+.+.|.-|++++-.|+..||+|+.+.+.
T Consensus 1 ~~itiy~~p~C~t~rka~~~L~~~gi~~~~~~y~ 34 (117)
T COG1393 1 MMITIYGNPNCSTCRKALAWLEEHGIEYTFIDYL 34 (117)
T ss_pred CeEEEEeCCCChHHHHHHHHHHHcCCCcEEEEee
Confidence 7899999999999999999999999999877654
No 189
>PRK10824 glutaredoxin-4; Provisional
Probab=96.81 E-value=0.008 Score=43.78 Aligned_cols=69 Identities=14% Similarity=0.013 Sum_probs=53.3
Q ss_pred cEEEec-----CCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEeeCCeeeeecHHHHHH
Q psy13748 3 LILHEI-----IASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDGDLIVWDSHAINAY 73 (296)
Q Consensus 3 ~~Ly~~-----~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~~es~~I~~y 73 (296)
+.+|.- ++||||.++.-+|...|++|+.+.++-. ......+.+.+...+||-+..||..|.....+...
T Consensus 17 Vvvf~Kg~~~~p~Cpyc~~ak~lL~~~~i~~~~idi~~d--~~~~~~l~~~sg~~TVPQIFI~G~~IGG~ddl~~l 90 (115)
T PRK10824 17 ILLYMKGSPKLPSCGFSAQAVQALSACGERFAYVDILQN--PDIRAELPKYANWPTFPQLWVDGELVGGCDIVIEM 90 (115)
T ss_pred EEEEECCCCCCCCCchHHHHHHHHHHcCCCceEEEecCC--HHHHHHHHHHhCCCCCCeEEECCEEEcChHHHHHH
Confidence 456644 5899999999999999999998777532 23344566777788999999999888877666654
No 190
>cd03036 ArsC_like Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC. Proteins containing a redox active CXXC motif like TRX and glutaredoxin (GRX) function as protein disulfide oxidoreductases, altering the redox state of target proteins via the reversible oxidation of the active site dithiol. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via GRX, through a single catalytic cysteine.
Probab=96.78 E-value=0.0018 Score=47.11 Aligned_cols=32 Identities=22% Similarity=0.144 Sum_probs=30.0
Q ss_pred cEEEecCCCchhHHHHHHHHHhCCceeEEEec
Q psy13748 3 LILHEIIASPPVRAVKLCLTELGLEAEYKTCN 34 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~ 34 (296)
++||+.+.|++|++++-+|..+|++|+.+.+.
T Consensus 1 i~iY~~~~C~~c~ka~~~L~~~~i~~~~idi~ 32 (111)
T cd03036 1 LKFYEYPKCSTCRKAKKWLDEHGVDYTAIDIV 32 (111)
T ss_pred CEEEECCCCHHHHHHHHHHHHcCCceEEeccc
Confidence 68999999999999999999999999988775
No 191
>cd03078 GST_N_Metaxin1_like GST_N family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins including Tom37 from fungi. Mammalian metaxin (or metaxin 1) and the fungal protein Tom37 are components of preprotein import complexes of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals.
Probab=96.77 E-value=0.0021 Score=42.90 Aligned_cols=31 Identities=19% Similarity=0.236 Sum_probs=27.9
Q ss_pred ccCCCCCccEEEeCCEEeeccHHHHHHHHHH
Q psy13748 135 QLNPQHTVPTLEDGDLIVWDSHAINAYLVSA 165 (296)
Q Consensus 135 ~~nP~~~vP~L~~~g~~l~es~aI~~yl~~~ 165 (296)
...|.|++|+|+++|..+.+|..|++||.++
T Consensus 42 ~~sp~gkLP~l~~~~~~i~d~~~Ii~~L~~~ 72 (73)
T cd03078 42 WRSPTGKLPALLTSGTKISGPEKIIEYLRKQ 72 (73)
T ss_pred CCCCCCccCEEEECCEEecChHHHHHHHHHc
Confidence 4568999999999999999999999999753
No 192
>cd03032 ArsC_Spx Arsenate Reductase (ArsC) family, Spx subfamily; Spx is a unique RNA polymerase (RNAP)-binding protein present in bacilli and some mollicutes. It inhibits transcription by binding to the C-terminal domain of the alpha subunit of RNAP, disrupting complex formation between RNAP and certain transcriptional activator proteins like ResD and ComA. In response to oxidative stress, Spx can also activate transcription, making it a general regulator that exerts both positive and negative control over transcription initiation. Spx has been shown to exert redox-sensitive transcriptional control over genes like trxA (TRX) and trxB (TRX reductase), genes that function in thiol homeostasis. This redox-sensitive activity is dependent on the presence of a CXXC motif, present in some members of the Spx subfamily, that acts as a thiol/disulfide switch. Spx has also been shown to repress genes in a sulfate-dependent manner independent of the presence of the CXXC motif.
Probab=96.74 E-value=0.0022 Score=46.98 Aligned_cols=32 Identities=19% Similarity=0.097 Sum_probs=30.1
Q ss_pred cEEEecCCCchhHHHHHHHHHhCCceeEEEec
Q psy13748 3 LILHEIIASPPVRAVKLCLTELGLEAEYKTCN 34 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~ 34 (296)
+++|+.+.|+.|++++-+|..+|++|+.+.+.
T Consensus 2 i~iY~~~~C~~c~ka~~~L~~~gi~~~~idi~ 33 (115)
T cd03032 2 IKLYTSPSCSSCRKAKQWLEEHQIPFEERNLF 33 (115)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCceEEEecC
Confidence 89999999999999999999999999988774
No 193
>KOG1752|consensus
Probab=96.68 E-value=0.013 Score=41.74 Aligned_cols=71 Identities=18% Similarity=0.235 Sum_probs=56.8
Q ss_pred cEEEecCCCchhHHHHHHHHHhCCceeEEEeccccc-ccchHHHHhhCCCccccEEeeCCeeeeecHHHHHH
Q psy13748 3 LILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAR-EQFSDEYLKLNPQHTVPTLEDGDLIVWDSHAINAY 73 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~-~~~~~~~~~~~p~~~vP~l~~~~~~~~es~~I~~y 73 (296)
+.+|.-.+||+|.+++-+|...|+++..+.+|-... .+....+.++.-..+||.+..+|..+--...+..+
T Consensus 16 VVifSKs~C~~c~~~k~ll~~~~v~~~vvELD~~~~g~eiq~~l~~~tg~~tvP~vFI~Gk~iGG~~dl~~l 87 (104)
T KOG1752|consen 16 VVIFSKSSCPYCHRAKELLSDLGVNPKVVELDEDEDGSEIQKALKKLTGQRTVPNVFIGGKFIGGASDLMAL 87 (104)
T ss_pred EEEEECCcCchHHHHHHHHHhCCCCCEEEEccCCCCcHHHHHHHHHhcCCCCCCEEEECCEEEcCHHHHHHH
Confidence 678888999999999999999999999999886532 23334444667777999999999888877777665
No 194
>cd02977 ArsC_family Arsenate Reductase (ArsC) family; composed of TRX-fold arsenic reductases and similar proteins including the transcriptional regulator, Spx. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX), through a single catalytic cysteine. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases. Spx is a general regulator that exerts negative and positive control over transcription initiation by binding to the C-terminal domain of the alpha subunit of RNA polymerase.
Probab=96.64 E-value=0.0028 Score=45.56 Aligned_cols=32 Identities=19% Similarity=0.163 Sum_probs=30.0
Q ss_pred cEEEecCCCchhHHHHHHHHHhCCceeEEEec
Q psy13748 3 LILHEIIASPPVRAVKLCLTELGLEAEYKTCN 34 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~ 34 (296)
+++|+.+.|++|++++-+|..+|++|+.+.+.
T Consensus 1 i~iY~~~~C~~c~ka~~~L~~~~i~~~~idi~ 32 (105)
T cd02977 1 ITIYGNPNCSTSRKALAWLEEHGIEYEFIDYL 32 (105)
T ss_pred CEEEECCCCHHHHHHHHHHHHcCCCcEEEeec
Confidence 58999999999999999999999999988875
No 195
>cd02973 TRX_GRX_like Thioredoxin (TRX)-Glutaredoxin (GRX)-like family; composed of archaeal and bacterial proteins that show similarity to both TRX and GRX, including the C-terminal TRX-fold subdomain of Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO). All members contain a redox-active CXXC motif and may function as PDOs. The archaeal proteins Mj0307 and Mt807 show structures more similar to GRX, but activities more similar to TRX. Some members of the family are similar to PfPDO in that they contain a second CXXC motif located in a second TRX-fold subdomain at the N-terminus; the superimposable N- and C-terminal TRX subdomains form a compact structure. PfPDO is postulated to be the archaeal counterpart of bacterial DsbA and eukaryotic protein disulfide isomerase (PDI). The C-terminal CXXC motif of PfPDO is required for its oxidase, reductase and isomerase activities. Also included in the family is the C-terminal TRX-fold subdomain of the N-terminal domain (NTD) of bacteri
Probab=96.60 E-value=0.012 Score=38.23 Aligned_cols=57 Identities=9% Similarity=0.060 Sum_probs=40.1
Q ss_pred cEEEecCCCchhHHHHHHHHHh-----CCceeEEEecccccccchHHHHhhCCCccccEEeeCCeeee
Q psy13748 3 LILHEIIASPPVRAVKLCLTEL-----GLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDGDLIVW 65 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~-----gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~~ 65 (296)
+++|+.++||+|.+++-+|.+. +++|..+.++ + .++..+......+|++..||..+.
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~~i~~~~id~~--~----~~~l~~~~~i~~vPti~i~~~~~~ 64 (67)
T cd02973 3 IEVFVSPTCPYCPDAVQAANRIAALNPNISAEMIDAA--E----FPDLADEYGVMSVPAIVINGKVEF 64 (67)
T ss_pred EEEEECCCCCCcHHHHHHHHHHHHhCCceEEEEEEcc--c----CHhHHHHcCCcccCEEEECCEEEE
Confidence 6899999999999999998875 4666555443 1 234444444567999987776554
No 196
>PRK13344 spxA transcriptional regulator Spx; Reviewed
Probab=96.55 E-value=0.0035 Score=47.02 Aligned_cols=32 Identities=13% Similarity=0.121 Sum_probs=30.4
Q ss_pred cEEEecCCCchhHHHHHHHHHhCCceeEEEec
Q psy13748 3 LILHEIIASPPVRAVKLCLTELGLEAEYKTCN 34 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~ 34 (296)
+++|+.+.|+.|++++-+|..+||+|+.+.+.
T Consensus 2 i~iY~~~~C~~crkA~~~L~~~~i~~~~~d~~ 33 (132)
T PRK13344 2 IKIYTISSCTSCKKAKTWLNAHQLSYKEQNLG 33 (132)
T ss_pred EEEEeCCCCHHHHHHHHHHHHcCCCeEEEECC
Confidence 89999999999999999999999999988875
No 197
>KOG1422|consensus
Probab=96.44 E-value=0.0041 Score=49.36 Aligned_cols=116 Identities=17% Similarity=0.082 Sum_probs=69.3
Q ss_pred CCCCCccccccCCCCCccEEEeCCEEeeccHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhHHhhccchhhhHHHHhhhhh
Q psy13748 126 GWIPINFSPQLNPQHTVPTLEDGDLIVWDSHAINAYLVSAYGKNDALYPKDPKVRALVDQRLHFDSGVLFSALRNIGLKI 205 (296)
Q Consensus 126 ~~~~~~~~~~~nP~~~vP~L~~~g~~l~es~aI~~yl~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (296)
...+|+++.++.|.|++|+|..|+.++++|..|-++|.+.+++... + ..........-...|...
T Consensus 45 ~~~kp~~f~~~sp~~~~P~l~~d~~~~tDs~~Ie~~Lee~l~~p~~-----~----------~~~~~E~asag~diF~kF 109 (221)
T KOG1422|consen 45 LSRKPEWFLDISPGGKPPVLKFDEKWVTDSDKIEEFLEEKLPPPKL-----P----------TLAPPESASAGSDIFAKF 109 (221)
T ss_pred cCCCcHHHHhhCCCCCCCeEEeCCceeccHHHHHHHHHHhcCCCCC-----c----------ccCCHHHHhhHHHHHHHH
Confidence 3445777699999999999999999999999999999999974110 0 000111111112222222
Q ss_pred hccCCcCCcHHHHHHHHH-HHHHHHHHcCCCCCcCC---CcccchhHhHHHHHHHHHhh
Q psy13748 206 FFKNEKEIPEEDKLRARE-ALDFAEKFLQGRKFITG---DTYNIADFSIYTTASALVAL 260 (296)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~-~l~~le~~L~~~~~l~g---~~~t~aD~~~~~~l~~~~~~ 260 (296)
..-.... .+...+..+. .+..+ +.|++ ||.. .+|..||-++.+|+..+..+
T Consensus 110 ~~fi~ks-k~~~n~~~e~~Ll~~L-~~Ld~--yL~sp~~~~Fl~Gd~lt~aDcsLlPKL 164 (221)
T KOG1422|consen 110 SAFIKKS-KDAANDGLEKALLKEL-EKLDD--YLKSPSRRKFLDGDKLTLADCSLLPKL 164 (221)
T ss_pred HHHHhCc-hhhccchHHHHHHHHH-HHHHH--HhcCccCCccccCCeeeeehhhhchhH
Confidence 1100111 1111122222 33333 55555 8874 57899999999999877665
No 198
>PRK10026 arsenate reductase; Provisional
Probab=96.44 E-value=0.0044 Score=46.83 Aligned_cols=34 Identities=15% Similarity=0.051 Sum_probs=31.2
Q ss_pred Cc-cEEEecCCCchhHHHHHHHHHhCCceeEEEec
Q psy13748 1 MG-LILHEIIASPPVRAVKLCLTELGLEAEYKTCN 34 (296)
Q Consensus 1 M~-~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~ 34 (296)
|+ +++|+++.|.-|++++-.|.++|++|+.+.+-
T Consensus 1 m~~i~iY~~p~Cst~RKA~~wL~~~gi~~~~~d~~ 35 (141)
T PRK10026 1 MSNITIYHNPACGTSRNTLEMIRNSGTEPTIIHYL 35 (141)
T ss_pred CCEEEEEeCCCCHHHHHHHHHHHHCCCCcEEEeee
Confidence 75 99999999999999999999999999887763
No 199
>PRK12559 transcriptional regulator Spx; Provisional
Probab=96.42 E-value=0.0048 Score=46.25 Aligned_cols=33 Identities=18% Similarity=0.137 Sum_probs=30.6
Q ss_pred ccEEEecCCCchhHHHHHHHHHhCCceeEEEec
Q psy13748 2 GLILHEIIASPPVRAVKLCLTELGLEAEYKTCN 34 (296)
Q Consensus 2 ~~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~ 34 (296)
|+++|+.+.|+.|++++-+|..+|++|+.+.+.
T Consensus 1 mi~iY~~~~C~~crkA~~~L~~~gi~~~~~di~ 33 (131)
T PRK12559 1 MVVLYTTASCASCRKAKAWLEENQIDYTEKNIV 33 (131)
T ss_pred CEEEEeCCCChHHHHHHHHHHHcCCCeEEEEee
Confidence 389999999999999999999999999988775
No 200
>PTZ00062 glutaredoxin; Provisional
Probab=96.40 E-value=0.017 Score=46.74 Aligned_cols=68 Identities=16% Similarity=0.067 Sum_probs=51.3
Q ss_pred cEEEec-----CCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEeeCCeeeeecHHHHH
Q psy13748 3 LILHEI-----IASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDGDLIVWDSHAINA 72 (296)
Q Consensus 3 ~~Ly~~-----~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~~es~~I~~ 72 (296)
+.||.- +.||+|.++.-+|...||+|+...++ ..+.......+.+...++|.+..+|..+.....+.+
T Consensus 115 Vvvf~Kg~~~~p~C~~C~~~k~~L~~~~i~y~~~DI~--~d~~~~~~l~~~sg~~TvPqVfI~G~~IGG~d~l~~ 187 (204)
T PTZ00062 115 ILLFMKGSKTFPFCRFSNAVVNMLNSSGVKYETYNIF--EDPDLREELKVYSNWPTYPQLYVNGELIGGHDIIKE 187 (204)
T ss_pred EEEEEccCCCCCCChhHHHHHHHHHHcCCCEEEEEcC--CCHHHHHHHHHHhCCCCCCeEEECCEEEcChHHHHH
Confidence 556633 68999999999999999999987765 223334455567777899999988888877665555
No 201
>cd03199 GST_C_GRX2 GST_C family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD (most GRXs range from 9-12kD). GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain, but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=96.40 E-value=0.1 Score=38.65 Aligned_cols=67 Identities=7% Similarity=0.166 Sum_probs=51.3
Q ss_pred cHHHHHHHHHHHHHHHHHcCCCCCcCCCcccchhHhHHHHHHHHHhh-CCCCCCchhHHHHHHHHhccccCc
Q psy13748 214 PEEDKLRAREALDFAEKFLQGRKFITGDTYNIADFSIYTTASALVAL-VPGLEKYPNLAKYFDLCKSSFKGI 284 (296)
Q Consensus 214 ~~~~~~~~~~~l~~le~~L~~~~~l~g~~~t~aD~~~~~~l~~~~~~-~~~~~~~p~l~~~~~~~~~~~p~~ 284 (296)
.+...++++..+..++..+...... +..+++-|+.+++.|..+..+ |..+. |++.+|+++|++ ...+
T Consensus 58 t~~~i~~l~~~L~~l~~ll~~~~~~-n~~ls~DDi~lFp~LR~Lt~vkgi~~P--~~V~~Y~~~~s~-~t~V 125 (128)
T cd03199 58 TPQYIAALNALLEELDPLILSSEAV-NGQLSTDDIILFPILRNLTLVKGLVFP--PKVKAYLERMSA-LTKV 125 (128)
T ss_pred cHHHHHHHHHHHHHHHHHHcCcccc-CCcCCHHHHHHHHHHhhhhhhcCCCCC--HHHHHHHHHHHH-HhCC
Confidence 4466778888999999988543344 456999999999999888777 44332 789999999998 6543
No 202
>PF04399 Glutaredoxin2_C: Glutaredoxin 2, C terminal domain; InterPro: IPR007494 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. Unlike other glutaredoxins, glutaredoxin 2 (Grx2) cannot reduce ribonucleotide reductase. Grx2 has significantly higher catalytic activity in the reduction of mixed disulphides with glutathione (GSH) compared with other glutaredoxins. The active site residues (Cys9-Pro10-Tyr11-Cys12, in Escherichia coli Grx2, P39811 from SWISSPROT), which are found at the interface between the N- and C-terminal domains are identical to other glutaredoxins, but there is no other similarity between glutaredoxin 2 and other glutaredoxins. Grx2 is structurally similar to glutathione-S-transferases (GST), but there is no obvious sequence similarity. The inter-domain contacts are mainly hydrophobic, suggesting that the two domains are unlikely to be stable on their own. Both domains are needed for correct folding and activity of Grx2. It is thought that the primary function of Grx2 is to catalyse reversible glutathionylation of proteins with GSH in cellular redox regulation including the response to oxidative stress. The N-terminal domain is IPR004045 from INTERPRO.; PDB: 1G7O_A 3IR4_A.
Probab=96.32 E-value=0.034 Score=41.49 Aligned_cols=67 Identities=18% Similarity=0.270 Sum_probs=48.8
Q ss_pred cHHHHHHHHHHHHHHHHHcCCCCCcCCCcccchhHhHHHHHHHHHhh-CCCCCCchhHHHHHHHHhccccCc
Q psy13748 214 PEEDKLRAREALDFAEKFLQGRKFITGDTYNIADFSIYTTASALVAL-VPGLEKYPNLAKYFDLCKSSFKGI 284 (296)
Q Consensus 214 ~~~~~~~~~~~l~~le~~L~~~~~l~g~~~t~aD~~~~~~l~~~~~~-~~~~~~~p~l~~~~~~~~~~~p~~ 284 (296)
.++..++++..|..++..+.......| .+|+-|+.+++.|..+..+ |..+. |++.+|+++|.+ .-.+
T Consensus 57 t~~~i~~l~~~L~~Le~ll~~~~~~n~-~LS~dDi~lFp~LR~Ltivkgi~~P--~~V~~Y~~~~s~-~t~V 124 (132)
T PF04399_consen 57 TPELIAELNADLEELEPLLASPNAVNG-ELSIDDIILFPILRSLTIVKGIQWP--PKVRAYMDRMSK-ATGV 124 (132)
T ss_dssp HHHHHHHHHHHHHHHHHH-SCTTBTTS-S--HHHHHHHHHHHHHCTCTTS-----HHHHHHHHHHHH-HHT-
T ss_pred CHHHHHHHHHHHHHHHHHhccccccCC-CCCHHHHHHHHHHhhhhhccCCcCC--HHHHHHHHHHHH-HcCC
Confidence 446677889999999999886555555 7999999999999887776 54333 799999999997 6443
No 203
>TIGR01617 arsC_related transcriptional regulator, Spx/MgsR family. This model represents a portion of the proteins within the larger set covered by Pfam model pfam03960. That larger family includes a glutaredoxin-dependent arsenate reductase (TIGR00014). Characterized members of this family include Spx and MgsR from Bacillus subtili. Spx is a global regulator for response to thiol-specific oxidative stress. It interacts with RNA polymerase. MgsR (modulator of the general stress response, also called YqgZ) provides a second level of regulation for more than a third of the proteins in the B. subtilis general stress regulon controlled by Sigma-B.
Probab=96.18 E-value=0.0074 Score=44.33 Aligned_cols=32 Identities=9% Similarity=0.134 Sum_probs=29.5
Q ss_pred cEEEecCCCchhHHHHHHHHHhCCceeEEEec
Q psy13748 3 LILHEIIASPPVRAVKLCLTELGLEAEYKTCN 34 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~ 34 (296)
+++|+.+.|+.|++++-+|..+|++|+.+.+.
T Consensus 1 i~iY~~~~C~~c~ka~~~L~~~~i~~~~idi~ 32 (117)
T TIGR01617 1 IKVYGSPNCTTCKKARRWLEANGIEYQFIDIG 32 (117)
T ss_pred CEEEeCCCCHHHHHHHHHHHHcCCceEEEecC
Confidence 58999999999999999999999999887764
No 204
>COG4545 Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=96.15 E-value=0.018 Score=37.59 Aligned_cols=65 Identities=17% Similarity=0.172 Sum_probs=46.5
Q ss_pred Cc-cEEEecCCCchhHHHHHHHHHhCCceeEEEeccccc--------ccchHHHHhh--CCCccccEEe-eCCeeee
Q psy13748 1 MG-LILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAR--------EQFSDEYLKL--NPQHTVPTLE-DGDLIVW 65 (296)
Q Consensus 1 M~-~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~--------~~~~~~~~~~--~p~~~vP~l~-~~~~~~~ 65 (296)
|+ .+||+...||-|.-..-.|+-.++.|+.+.|.-.-. ....++|-.. |..--+|+|. +||.++.
T Consensus 1 mskp~lfgsn~Cpdca~a~eyl~rl~v~yd~VeIt~Sm~NlKrFl~lRDs~~~Fd~vk~~gyiGIPall~~d~~vVl 77 (85)
T COG4545 1 MSKPKLFGSNLCPDCAPAVEYLERLNVDYDFVEITESMANLKRFLHLRDSRPEFDEVKSNGYIGIPALLTDDGKVVL 77 (85)
T ss_pred CCCceeeccccCcchHHHHHHHHHcCCCceeeehhhhhhhHHHHHhhhccchhHHhhhhcCcccceEEEeCCCcEEE
Confidence 55 799999999999999999999999999998853211 1223444433 3334579985 6666655
No 205
>cd03035 ArsC_Yffb Arsenate Reductase (ArsC) family, Yffb subfamily; Yffb is an uncharacterized bacterial protein encoded by the yffb gene, related to the thioredoxin-fold arsenic reductases, ArsC. The structure of Yffb and the conservation of the catalytic cysteine suggest that it is likely to function as a glutathione (GSH)-dependent thiol reductase. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from GSH via glutaredoxin, through a single catalytic cysteine.
Probab=96.11 E-value=0.0089 Score=42.95 Aligned_cols=32 Identities=16% Similarity=0.241 Sum_probs=29.8
Q ss_pred cEEEecCCCchhHHHHHHHHHhCCceeEEEec
Q psy13748 3 LILHEIIASPPVRAVKLCLTELGLEAEYKTCN 34 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~ 34 (296)
+++|+.+.|+.|++++-.|.+.|++|+.+.+.
T Consensus 1 i~iy~~~~C~~crka~~~L~~~~i~~~~~di~ 32 (105)
T cd03035 1 ITLYGIKNCDTVKKARKWLEARGVAYTFHDYR 32 (105)
T ss_pred CEEEeCCCCHHHHHHHHHHHHcCCCeEEEecc
Confidence 58999999999999999999999999987765
No 206
>cd03033 ArsC_15kD Arsenate Reductase (ArsC) family, 15kD protein subfamily; composed of proteins of unknown function with similarity to thioredoxin-fold arsenic reductases, ArsC. It is encoded by an ORF present in a gene cluster associated with nitrogen fixation that also encodes dinitrogenase reductase ADP-ribosyltransferase (DRAT) and dinitrogenase reductase activating glycohydrolase (DRAG). ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via glutaredoxin, through a single catalytic cysteine.
Probab=96.04 E-value=0.0089 Score=43.53 Aligned_cols=32 Identities=22% Similarity=0.136 Sum_probs=29.6
Q ss_pred cEEEecCCCchhHHHHHHHHHhCCceeEEEec
Q psy13748 3 LILHEIIASPPVRAVKLCLTELGLEAEYKTCN 34 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~ 34 (296)
++||+.+.|..|++++-.|.++|++|+.+.+-
T Consensus 2 i~iy~~p~C~~crkA~~~L~~~gi~~~~~d~~ 33 (113)
T cd03033 2 IIFYEKPGCANNARQKALLEAAGHEVEVRDLL 33 (113)
T ss_pred EEEEECCCCHHHHHHHHHHHHcCCCcEEeehh
Confidence 68999999999999999999999999887764
No 207
>PRK10853 putative reductase; Provisional
Probab=95.94 E-value=0.01 Score=43.61 Aligned_cols=32 Identities=13% Similarity=0.277 Sum_probs=29.4
Q ss_pred cEEEecCCCchhHHHHHHHHHhCCceeEEEec
Q psy13748 3 LILHEIIASPPVRAVKLCLTELGLEAEYKTCN 34 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~ 34 (296)
+++|+.+.|.-|++++-.|++.|++|+.+.+-
T Consensus 2 i~iy~~~~C~t~rkA~~~L~~~~i~~~~~d~~ 33 (118)
T PRK10853 2 VTLYGIKNCDTIKKARRWLEAQGIDYRFHDYR 33 (118)
T ss_pred EEEEcCCCCHHHHHHHHHHHHcCCCcEEeehc
Confidence 89999999999999999999999999876653
No 208
>cd03030 GRX_SH3BGR Glutaredoxin (GRX) family, SH3BGR (SH3 domain binding glutamic acid-rich protein) subfamily; a recently-identified subfamily composed of SH3BGR and similar proteins possessing significant sequence similarity to GRX, but without a redox active CXXC motif. The SH3BGR gene was cloned in an effort to identify genes mapping to chromosome 21, which could be involved in the pathogenesis of congenital heart disease affecting Down syndrome newborns. Several human SH3BGR-like (SH3BGRL) genes have been identified since, mapping to different locations in the chromosome. Of these, SH3BGRL3 was identified as a tumor necrosis factor (TNF) alpha inhibitory protein and was also named TIP-B1. Upregulation of expression of SH3BGRL3 is associated with differentiation. It has been suggested that it functions as a regulator of differentiation-related signal transduction pathways.
Probab=95.70 E-value=0.076 Score=37.06 Aligned_cols=68 Identities=16% Similarity=0.027 Sum_probs=49.3
Q ss_pred cEEEecCCCc------hhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCC----CccccEEeeCCeeeeecHHHHH
Q psy13748 3 LILHEIIASP------PVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNP----QHTVPTLEDGDLIVWDSHAINA 72 (296)
Q Consensus 3 ~~Ly~~~~s~------~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p----~~~vP~l~~~~~~~~es~~I~~ 72 (296)
+++|....+. .|++++.+|..+||+|+.+.|+... ....++.+..+ ...+|-+..|+..+.+...+..
T Consensus 2 i~vY~ts~~g~~~~k~~~~~v~~lL~~k~I~f~eiDI~~d~--~~r~em~~~~~~~~g~~tvPQIFi~~~~iGg~ddl~~ 79 (92)
T cd03030 2 IKVYIASSSGSTEIKKRQQEVLGFLEAKKIEFEEVDISMNE--ENRQWMRENVPNENGKPLPPQIFNGDEYCGDYEAFFE 79 (92)
T ss_pred EEEEEecccccHHHHHHHHHHHHHHHHCCCceEEEecCCCH--HHHHHHHHhcCCCCCCCCCCEEEECCEEeeCHHHHHH
Confidence 6788777654 3567889999999999999998642 23345555543 4789999888888887765554
No 209
>PF04908 SH3BGR: SH3-binding, glutamic acid-rich protein; InterPro: IPR006993 This family of proteins, which contains SH3BGRL3, is functionally uncharacterised. SH3BGRL3 is a highly conserved small protein, which is widely expressed and shows a significant similarity to glutaredoxin 1 (GRX1) of Escherichia coli which is predicted to belong to the thioredoxin superfamily. However, SH3BGRL3 lacks both conserved cysteine residues, which characterise the enzymatic active site of GRX. This structural feature raises the possibility that SH3BGRL3 and its homologues could function as endogenous modulators of GRX activity []. ; PDB: 1SJ6_A 1U6T_A 1WRY_A 1T1V_B 1J0F_A 2CT6_A.
Probab=95.67 E-value=0.052 Score=38.36 Aligned_cols=70 Identities=14% Similarity=0.016 Sum_probs=42.6
Q ss_pred CccEEEecCCCch------hHHHHHHHHHhCCceeEEEecccccccchHHHHhhC---------CCccccEEeeCCeeee
Q psy13748 1 MGLILHEIIASPP------VRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLN---------PQHTVPTLEDGDLIVW 65 (296)
Q Consensus 1 M~~~Ly~~~~s~~------~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~---------p~~~vP~l~~~~~~~~ 65 (296)
|.+++|....|.. .+++..+|+.++|+|+.+.|... +....++.+.. +..-.|-|..|+..+.
T Consensus 1 m~I~vy~ss~sg~~~ikk~q~~v~~iL~a~kI~fe~vDIa~~--e~~r~~mr~~~g~~~~~~~~~~~lpPqiF~~~~Y~G 78 (99)
T PF04908_consen 1 MVIKVYISSISGSREIKKRQQRVLMILEAKKIPFEEVDIAMD--EEARQWMRENAGPEEKDPGNGKPLPPQIFNGDEYCG 78 (99)
T ss_dssp -SEEEEE-SS-SSHHHHHHHHHHHHHHHHTT--EEEEETTT---HHHHHHHHHHT--CCCS-TSTT--S-EEEETTEEEE
T ss_pred CEEEEEEecccCCHHHHHHHHHHHHHHHHcCCCcEEEeCcCC--HHHHHHHHHhccccccCCCCCCCCCCEEEeCCEEEe
Confidence 7899999887665 34899999999999998777763 33334444433 2223467888888888
Q ss_pred ecHHHHH
Q psy13748 66 DSHAINA 72 (296)
Q Consensus 66 es~~I~~ 72 (296)
+-..+-+
T Consensus 79 dye~f~e 85 (99)
T PF04908_consen 79 DYEDFEE 85 (99)
T ss_dssp EHHHHHH
T ss_pred eHHHHHH
Confidence 7555443
No 210
>COG2999 GrxB Glutaredoxin 2 [Posttranslational modification, protein turnover, chaperones]
Probab=95.31 E-value=0.02 Score=44.30 Aligned_cols=52 Identities=29% Similarity=0.323 Sum_probs=38.0
Q ss_pred CCccEEE-eCCEEeeccHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhHHhhccchhh
Q psy13748 140 HTVPTLE-DGDLIVWDSHAINAYLVSAYGKNDALYPKDPKVRALVDQRLHFDSGVLF 195 (296)
Q Consensus 140 ~~vP~L~-~~g~~l~es~aI~~yl~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 195 (296)
-|||+|+ ++|..+.||..|..|+++..++ +-+ ...-+..++.|+.-..+...
T Consensus 46 KqVPiL~Kedg~~m~ESlDIV~y~d~~~~~-~~l---t~~~~pai~~wlrkv~~y~n 98 (215)
T COG2999 46 KQVPILQKEDGRAMPESLDIVHYVDELDGK-PLL---TGKVRPAIEAWLRKVNGYLN 98 (215)
T ss_pred cccceEEccccccchhhhHHHHHHHHhcCc-hhh---ccCcCHHHHHHHHHhcchHh
Confidence 3999999 8999999999999999998873 111 22234567778776555443
No 211
>TIGR00412 redox_disulf_2 small redox-active disulfide protein 2. This small protein is found in three archaeal species so far (Methanococcus jannaschii, Archeoglobus fulgidus, and Methanobacterium thermoautotrophicum) as well as in Anabaena PCC7120. It is homologous to thioredoxins, glutaredoxins, and protein disulfide isomerases, and shares with them a redox-active disulfide. The redox active disulfide region CXXC motif resembles neither thioredoxin nor glutaredoxin. A closely related protein found in the same three Archaea, described by redox_disulf_1, has a glutaredoxin-like CP[YH]C sequence; it has been characterized in functional assays as redox-active but unlikely to be a thioredoxin or glutaredoxin.
Probab=95.18 E-value=0.14 Score=34.29 Aligned_cols=57 Identities=18% Similarity=0.250 Sum_probs=40.8
Q ss_pred CccEEEecCCCchhHHH----HHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEeeCCeeee
Q psy13748 1 MGLILHEIIASPPVRAV----KLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDGDLIVW 65 (296)
Q Consensus 1 M~~~Ly~~~~s~~~~~v----~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~~ 65 (296)
|-+.+|. ++||.|..+ .-++.+.|+.++.+.++- .++ ....-...+|+|+.||..+.
T Consensus 1 m~i~~~a-~~C~~C~~~~~~~~~~~~e~~~~~~~~~v~~------~~~-a~~~~v~~vPti~i~G~~~~ 61 (76)
T TIGR00412 1 MKIQIYG-TGCANCQMTEKNVKKAVEELGIDAEFEKVTD------MNE-ILEAGVTATPGVAVDGELVI 61 (76)
T ss_pred CEEEEEC-CCCcCHHHHHHHHHHHHHHcCCCeEEEEeCC------HHH-HHHcCCCcCCEEEECCEEEE
Confidence 5577877 999999987 668888999888877761 122 22234568999987776554
No 212
>TIGR01616 nitro_assoc nitrogenase-associated protein. This model describes a small family of uncharacterized proteins found so far in alpha and gamma proteobacteria and in Nostoc sp. PCC 7120, a cyanobacterium. The gene for this protein is associated with nitrogenase genes. This family shows sequence similarity to TIGR00014, a glutaredoxin-dependent arsenate reductase that converts arsentate to arsenite for disposal. This family is one of several included in Pfam model pfam03960.
Probab=95.16 E-value=0.03 Score=41.61 Aligned_cols=32 Identities=19% Similarity=0.132 Sum_probs=29.6
Q ss_pred cEEEecCCCchhHHHHHHHHHhCCceeEEEec
Q psy13748 3 LILHEIIASPPVRAVKLCLTELGLEAEYKTCN 34 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~ 34 (296)
+++|+++.|.-|++++-.|.++||+|+.+.+-
T Consensus 3 i~iY~~p~Cst~RKA~~~L~~~gi~~~~~d~~ 34 (126)
T TIGR01616 3 IIFYEKPGCANNARQKAALKASGHDVEVQDIL 34 (126)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCCcEEEecc
Confidence 78999999999999999999999999887753
No 213
>cd03034 ArsC_ArsC Arsenate Reductase (ArsC) family, ArsC subfamily; arsenic reductases similar to that encoded by arsC on the R733 plasmid of Escherichia coli. E. coli ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], the first step in the detoxification of arsenic, using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX). ArsC contains a single catalytic cysteine, within a thioredoxin fold, that forms a covalent thiolate-As(V) intermediate, which is reduced by GRX through a mixed GSH-arsenate intermediate. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases.
Probab=94.77 E-value=0.046 Score=39.74 Aligned_cols=31 Identities=19% Similarity=0.174 Sum_probs=28.7
Q ss_pred cEEEecCCCchhHHHHHHHHHhCCceeEEEe
Q psy13748 3 LILHEIIASPPVRAVKLCLTELGLEAEYKTC 33 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i 33 (296)
+++|+.+.|.-|++++-.|++.|++|+.+.+
T Consensus 1 i~iy~~~~C~t~rkA~~~L~~~~i~~~~~di 31 (112)
T cd03034 1 ITIYHNPRCSKSRNALALLEEAGIEPEIVEY 31 (112)
T ss_pred CEEEECCCCHHHHHHHHHHHHCCCCeEEEec
Confidence 6899999999999999999999999987665
No 214
>TIGR00014 arsC arsenate reductase (glutaredoxin). composed of two polypeptides, the products of the arsA and arsB genes. The pump alone produces resistance to arsenite and antimonite. This protein, ArsC, catalyzes the reduction of arsenate to arsenite, and thus extends resistance to include arsenate.
Probab=94.69 E-value=0.05 Score=39.70 Aligned_cols=32 Identities=16% Similarity=0.105 Sum_probs=29.1
Q ss_pred cEEEecCCCchhHHHHHHHHHhCCceeEEEec
Q psy13748 3 LILHEIIASPPVRAVKLCLTELGLEAEYKTCN 34 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~ 34 (296)
+++|+.+.|.-|++++-.|...|++|+.+.+.
T Consensus 1 i~iy~~~~C~t~rkA~~~L~~~~i~~~~~di~ 32 (114)
T TIGR00014 1 VTIYHNPRCSKSRNTLALLEDKGIEPEVVKYL 32 (114)
T ss_pred CEEEECCCCHHHHHHHHHHHHCCCCeEEEecc
Confidence 58999999999999999999999999876653
No 215
>PF10568 Tom37: Outer mitochondrial membrane transport complex protein; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=94.57 E-value=0.052 Score=35.98 Aligned_cols=29 Identities=38% Similarity=0.539 Sum_probs=26.5
Q ss_pred cccCCCCCccEEEe-CCEEeeccHHHHHHH
Q psy13748 134 PQLNPQHTVPTLED-GDLIVWDSHAINAYL 162 (296)
Q Consensus 134 ~~~nP~~~vP~L~~-~g~~l~es~aI~~yl 162 (296)
....|.|++|+|.+ ++..+.+-..|++||
T Consensus 42 ~~~Sptg~LP~L~~~~~~~vsg~~~Iv~yL 71 (72)
T PF10568_consen 42 PWLSPTGELPALIDSGGTWVSGFRNIVEYL 71 (72)
T ss_pred CCcCCCCCCCEEEECCCcEEECHHHHHHhh
Confidence 45679999999998 999999999999997
No 216
>KOG1147|consensus
Probab=94.33 E-value=0.012 Score=53.33 Aligned_cols=106 Identities=22% Similarity=0.288 Sum_probs=71.9
Q ss_pred CEEeeccHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhHHhhccchhhhHHHHhhhhhhccCCcCCcHHHHHHHHHHHHHH
Q psy13748 149 DLIVWDSHAINAYLVSAYGKNDALYPKDPKVRALVDQRLHFDSGVLFSALRNIGLKIFFKNEKEIPEEDKLRAREALDFA 228 (296)
Q Consensus 149 g~~l~es~aI~~yl~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 228 (296)
|..+..+..+..|.+..-...+.|++.+ .++++++.|.++... .....+...+..+
T Consensus 45 ~~~l~~a~~~~~~~~~~~~~~~~lf~~~-~d~~~vd~w~~~s~~-----------------------~~~~~~s~~~~~l 100 (712)
T KOG1147|consen 45 GRKLNGATEPVVYSAALAKADPKLFGNN-IDRSQVDHWVSFSST-----------------------FSFDEISSSLSEL 100 (712)
T ss_pred cccccCCccchhhhhhhcccCHhHcCCc-ccHHHHHHHHHHhhh-----------------------cchHHHHHHHHHH
Confidence 4445555555666654334456678777 889999999987542 1124577777888
Q ss_pred HHHcCCCCCcCCCcccchhHhHHHHHHHHHhhC--CC-CCCchhHHHHHHHHh
Q psy13748 229 EKFLQGRKFITGDTYNIADFSIYTTASALVALV--PG-LEKYPNLAKYFDLCK 278 (296)
Q Consensus 229 e~~L~~~~~l~g~~~t~aD~~~~~~l~~~~~~~--~~-~~~~p~l~~~~~~~~ 278 (296)
..+|.-..||+|.++|.||+.+++.+..-.... .. ...+-++.+|++..+
T Consensus 101 d~~l~~~t~lvg~sls~Ad~aiw~~l~~n~~~~~~lk~~k~~~~v~Rw~~~~~ 153 (712)
T KOG1147|consen 101 DKFLVLRTFLVGNSLSIADFAIWGALHSNGMRQEQLKAKKDYQNVERWYDLPE 153 (712)
T ss_pred HhhhhHHHHhhccchhHHHHHHHHHHhcccchHHHHHhhCCchhhhhhcCcHh
Confidence 888887789999999999999999997632221 11 234557788877433
No 217
>PF05768 DUF836: Glutaredoxin-like domain (DUF836); InterPro: IPR008554 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. This family contains several viral glutaredoxins, and many related bacterial and eukaryotic proteins of unknown function. The best characterised member of this family is G4L (P68460 from SWISSPROT) from Vaccinia virus (strain Western Reserve/WR) (VACV), which is necessary for virion morphogenesis and virus replication []. This is a cytomplasmic protein which functions as a shuttle in a redox pathway between membrane-associated E10R and L1R or F9L []. ; PDB: 1TTZ_A 1XPV_A 2FGX_A 2G2Q_C 1WJK_A.
Probab=93.60 E-value=0.41 Score=32.44 Aligned_cols=54 Identities=17% Similarity=0.165 Sum_probs=38.4
Q ss_pred cEEEecCCCchhHHHHHHHHHhC--CceeEEEecccccccchHHHHhhCCCccccEEeeCC
Q psy13748 3 LILHEIIASPPVRAVKLCLTELG--LEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDGD 61 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~g--i~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~ 61 (296)
++||+-++|+.|..+...|+... .+|+...+|.... ..++.+-. -.||||..++
T Consensus 2 l~l~~k~~C~LC~~a~~~L~~~~~~~~~~l~~vDI~~d---~~l~~~Y~--~~IPVl~~~~ 57 (81)
T PF05768_consen 2 LTLYTKPGCHLCDEAKEILEEVAAEFPFELEEVDIDED---PELFEKYG--YRIPVLHIDG 57 (81)
T ss_dssp EEEEE-SSSHHHHHHHHHHHHCCTTSTCEEEEEETTTT---HHHHHHSC--TSTSEEEETT
T ss_pred EEEEcCCCCChHHHHHHHHHHHHhhcCceEEEEECCCC---HHHHHHhc--CCCCEEEEcC
Confidence 68999999999999999999654 4566777776532 23333333 3899998666
No 218
>PHA02125 thioredoxin-like protein
Probab=93.43 E-value=0.3 Score=32.47 Aligned_cols=53 Identities=19% Similarity=0.149 Sum_probs=37.8
Q ss_pred ccEEEecCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEeeC
Q psy13748 2 GLILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDG 60 (296)
Q Consensus 2 ~~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~ 60 (296)
|+++|+.++|+.|..+.-.|+ +++++...++... .++..+...-..+|+++++
T Consensus 1 ~iv~f~a~wC~~Ck~~~~~l~--~~~~~~~~vd~~~----~~~l~~~~~v~~~PT~~~g 53 (75)
T PHA02125 1 MIYLFGAEWCANCKMVKPMLA--NVEYTYVDVDTDE----GVELTAKHHIRSLPTLVNT 53 (75)
T ss_pred CEEEEECCCCHhHHHHHHHHH--HHhheEEeeeCCC----CHHHHHHcCCceeCeEECC
Confidence 378999999999999888876 3566666665322 3455556666789999843
No 219
>PF11287 DUF3088: Protein of unknown function (DUF3088); InterPro: IPR021439 This family of proteins with unknown function appears to be restricted to Proteobacteria.
Probab=92.97 E-value=0.38 Score=34.42 Aligned_cols=68 Identities=16% Similarity=0.233 Sum_probs=45.6
Q ss_pred CCchhHHHHHHHHHhC---CceeEEEecccccccchHHHHh-hCC-CccccEEe-eCCe-------------eeeecHHH
Q psy13748 10 ASPPVRAVKLCLTELG---LEAEYKTCNLLAREQFSDEYLK-LNP-QHTVPTLE-DGDL-------------IVWDSHAI 70 (296)
Q Consensus 10 ~s~~~~~v~~~L~~~g---i~~~~~~i~~~~~~~~~~~~~~-~~p-~~~vP~l~-~~~~-------------~~~es~~I 70 (296)
.||.|..+.=+|...- -..+++.|+..+. ...... +.. ...+|+|+ .++. .|+|+..|
T Consensus 23 ~Cp~c~~iEGlLa~~P~l~~~ldV~rV~f~RP---R~~vi~llGE~~QslPvLVL~~~~~~~~~~~~~~~~rfi~d~~~I 99 (112)
T PF11287_consen 23 YCPHCAAIEGLLASFPDLRERLDVRRVDFPRP---RQAVIALLGEANQSLPVLVLADGAPSPDDAGSHGGRRFIDDPRRI 99 (112)
T ss_pred ECCchHHHHhHHhhChhhhhcccEEEeCCCCc---hHHHHHHhChhccCCCEEEeCCCCCCcccccccCCeEEeCCHHHH
Confidence 5788887776665432 2456677776543 233333 222 45789998 4333 79999999
Q ss_pred HHHHHHhcCC
Q psy13748 71 NAYLVSAYGK 80 (296)
Q Consensus 71 ~~yl~~~~~~ 80 (296)
+.||.++||-
T Consensus 100 ~~~La~r~g~ 109 (112)
T PF11287_consen 100 LRYLAERHGF 109 (112)
T ss_pred HHHHHHHcCC
Confidence 9999999984
No 220
>TIGR00411 redox_disulf_1 small redox-active disulfide protein 1. This protein is homologous to a family of proteins that includes thioredoxins, glutaredoxins, protein-disulfide isomerases, and others, some of which have several such domains. The sequence of this protein at the redox-active disufide site, CPYC, matches glutaredoxins rather than thioredoxins, although its overall sequence seems closer to thioredoxins. It is suggested to be a ribonucleotide-reducing system component distinct from thioredoxin or glutaredoxin.
Probab=92.95 E-value=0.6 Score=31.23 Aligned_cols=56 Identities=18% Similarity=0.128 Sum_probs=38.2
Q ss_pred cEEEecCCCchhHHHHHHHHH----hCCceeEEEecccccccchHHHHhhCCCccccEEeeCCe
Q psy13748 3 LILHEIIASPPVRAVKLCLTE----LGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDGDL 62 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~----~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~ 62 (296)
+++|+.++|++|..+.-.|.. .+..+....+|..+ .++..+......+|+++.+|.
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~vd~~~----~~~~~~~~~v~~vPt~~~~g~ 62 (82)
T TIGR00411 3 IELFTSPTCPYCPAAKRVVEEVAKEMGDAVEVEYINVME----NPQKAMEYGIMAVPAIVINGD 62 (82)
T ss_pred EEEEECCCCcchHHHHHHHHHHHHHhcCceEEEEEeCcc----CHHHHHHcCCccCCEEEECCE
Confidence 689999999999988877753 35446666666532 233344445567999986664
No 221
>cd03026 AhpF_NTD_C TRX-GRX-like family, Alkyl hydroperoxide reductase F subunit (AhpF) N-terminal domain (NTD) subfamily, C-terminal TRX-fold subdomain; AhpF is a homodimeric flavoenzyme which catalyzes the NADH-dependent reduction of the peroxiredoxin AhpC, which then reduces hydrogen peroxide and organic hydroperoxides. AhpF contains an NTD containing two contiguous TRX-fold subdomains similar to Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO). It also contains a catalytic core similar to TRX reductase containing FAD and NADH binding domains with an active site disulfide. The proposed mechanism of action of AhpF is similar to a TRX/TRX reductase system. The flow of reducing equivalents goes from NADH - catalytic core of AhpF - NTD of AhpF - AhpC - peroxide substrates. The catalytic CXXC motif of the NTD of AhpF is contained in its C-terminal TRX subdomain.
Probab=92.50 E-value=0.7 Score=31.95 Aligned_cols=57 Identities=11% Similarity=0.004 Sum_probs=37.9
Q ss_pred cEEEecCCCchhHHHHHHHHHh-----CCceeEEEecccccccchHHHHhhCCCccccEEeeCCeeee
Q psy13748 3 LILHEIIASPPVRAVKLCLTEL-----GLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDGDLIVW 65 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~-----gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~~ 65 (296)
+.+|..++|++|..+.-++... ++.|+.+.++ . .++..+...-..+|+++.||..+.
T Consensus 16 i~~F~~~~C~~C~~~~~~~~~l~~~~~~i~~~~vd~~--~----~~e~a~~~~V~~vPt~vidG~~~~ 77 (89)
T cd03026 16 FETYVSLSCHNCPDVVQALNLMAVLNPNIEHEMIDGA--L----FQDEVEERGIMSVPAIFLNGELFG 77 (89)
T ss_pred EEEEECCCCCCcHHHHHHHHHHHHHCCCceEEEEEhH--h----CHHHHHHcCCccCCEEEECCEEEE
Confidence 7889999999999888777655 4555554443 1 234444444557999987775443
No 222
>PF13192 Thioredoxin_3: Thioredoxin domain; PDB: 1ZYP_B 1ZYN_A 1HYU_A 1ILO_A 1J08_F 2YWM_B 2AYT_B 2HLS_B 1A8L_A 2K8S_B ....
Probab=92.41 E-value=1.4 Score=29.28 Aligned_cols=59 Identities=20% Similarity=0.193 Sum_probs=38.2
Q ss_pred CccEEEecCCCchhHHHHH----HHHHhCCceeEEEecccccccchHHHHhhCCCccccEEeeCCeeeeec
Q psy13748 1 MGLILHEIIASPPVRAVKL----CLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDGDLIVWDS 67 (296)
Q Consensus 1 M~~~Ly~~~~s~~~~~v~~----~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~~es 67 (296)
|-+++ ..++||+|.++.- ++...|+.++...+. . .++. ....-..+|+|+.||...+..
T Consensus 1 m~I~v-~~~~C~~C~~~~~~~~~~~~~~~i~~ei~~~~--~----~~~~-~~ygv~~vPalvIng~~~~~G 63 (76)
T PF13192_consen 1 MKIKV-FSPGCPYCPELVQLLKEAAEELGIEVEIIDIE--D----FEEI-EKYGVMSVPALVINGKVVFVG 63 (76)
T ss_dssp EEEEE-ECSSCTTHHHHHHHHHHHHHHTTEEEEEEETT--T----HHHH-HHTT-SSSSEEEETTEEEEES
T ss_pred CEEEE-eCCCCCCcHHHHHHHHHHHHhcCCeEEEEEcc--C----HHHH-HHcCCCCCCEEEECCEEEEEe
Confidence 44677 5777999995555 566677777665542 1 2333 555667899999888765543
No 223
>cd01659 TRX_superfamily Thioredoxin (TRX) superfamily; a large, diverse group of proteins containing a TRX-fold. Many members contain a classic TRX domain with a redox active CXXC motif. They function as protein disulfide oxidoreductases (PDOs), altering the redox state of target proteins via the reversible oxidation of their active site dithiol. The PDO members of this superfamily include TRX, protein disulfide isomerase (PDI), tlpA-like, glutaredoxin, NrdH redoxin, and the bacterial Dsb (DsbA, DsbC, DsbG, DsbE, DsbDgamma) protein families. Members of the superfamily that do not function as PDOs but contain a TRX-fold domain include phosducins, peroxiredoxins and glutathione (GSH) peroxidases, SCO proteins, GSH transferases (GST, N-terminal domain), arsenic reductases, TRX-like ferredoxins and calsequestrin, among others.
Probab=91.73 E-value=0.58 Score=28.71 Aligned_cols=53 Identities=25% Similarity=0.187 Sum_probs=36.4
Q ss_pred cEEEecCCCchhHHHHHHHH-----HhCCceeEEEecccccccchHHHHhhCCCccccEEe
Q psy13748 3 LILHEIIASPPVRAVKLCLT-----ELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLE 58 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~-----~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~ 58 (296)
+.+|+...|++|.+++..+. ..++.+..+.++-... .......++...+|+++
T Consensus 1 l~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~P~~~ 58 (69)
T cd01659 1 LVLFYAPWCPFCQALRPVLAELALLNKGVKFEAVDVDEDPA---LEKELKRYGVGGVPTLV 58 (69)
T ss_pred CEEEECCCChhHHhhhhHHHHHHhhCCCcEEEEEEcCCChH---HhhHHHhCCCccccEEE
Confidence 46788899999999999999 4566665555543221 12223467788999986
No 224
>TIGR02190 GlrX-dom Glutaredoxin-family domain. This C-terminal domain with homology to glutaredoxin is fused to an N-terminal peroxiredoxin-like domain.
Probab=89.48 E-value=0.25 Score=33.29 Aligned_cols=42 Identities=21% Similarity=0.172 Sum_probs=31.7
Q ss_pred eeccCCCCCCccccccCCCCCccEEEeCCEEeeccHHHHHHHH
Q psy13748 121 SDLYLGWIPINFSPQLNPQHTVPTLEDGDLIVWDSHAINAYLV 163 (296)
Q Consensus 121 v~~~~~~~~~~~~~~~nP~~~vP~L~~~g~~l~es~aI~~yl~ 163 (296)
+|+.......++ ...++..+||++..||..+.++..|.+||+
T Consensus 38 idi~~~~~~~~~-~~~~g~~~vP~i~i~g~~igG~~~l~~~l~ 79 (79)
T TIGR02190 38 IPLGNDARGRSL-RAVTGATTVPQVFIGGKLIGGSDELEAYLA 79 (79)
T ss_pred EECCCChHHHHH-HHHHCCCCcCeEEECCEEEcCHHHHHHHhC
Confidence 444333333444 666788999999999999999999999984
No 225
>PF03960 ArsC: ArsC family; InterPro: IPR006660 Several bacterial taxon have a chromosomal resistance system, encoded by the ars operon, for the detoxification of arsenate, arsenite, and antimonite []. This system transports arsenite and antimonite out of the cell. The pump is composed of two polypeptides, the products of the arsA and arsB genes. This two-subunit enzyme produces resistance to arsenite and antimonite. Arsenate, however, must first be reduced to arsenite before it is extruded. A third gene, arsC, expands the substrate specificity to allow for arsenate pumping and resistance. ArsC is an approximately 150-residue arsenate reductase that uses reduced glutathione (GSH) to convert arsenate to arsenite with a redox active cysteine residue in the active site. ArsC forms an active quaternary complex with GSH, arsenate, and glutaredoxin 1 (Grx1). The three ligands must be present simultaneously for reduction to occur []. The arsC family also comprises the Spx proteins which are GRAM-positive bacterial transcription factors that regulate the transcription of multiple genes in response to disulphide stress []. The arsC protein structure has been solved []. It belongs to the thioredoxin superfamily fold which is defined by a beta-sheet core surrounded by alpha-helices. The active cysteine residue of ArsC is located in the loop between the first beta-strand and the first helix, which is also conserved in the Spx protein and its homologues.; PDB: 2KOK_A 1SK1_A 1SK2_A 1JZW_A 1J9B_A 1S3C_A 1SD8_A 1SD9_A 1I9D_A 1SK0_A ....
Probab=88.34 E-value=0.58 Score=33.76 Aligned_cols=29 Identities=21% Similarity=0.155 Sum_probs=22.5
Q ss_pred EecCCCchhHHHHHHHHHhCCceeEEEec
Q psy13748 6 HEIIASPPVRAVKLCLTELGLEAEYKTCN 34 (296)
Q Consensus 6 y~~~~s~~~~~v~~~L~~~gi~~~~~~i~ 34 (296)
|+.+.|.-|++++-.|++.|++|+.+.+.
T Consensus 1 Y~~~~C~t~rka~~~L~~~gi~~~~~d~~ 29 (110)
T PF03960_consen 1 YGNPNCSTCRKALKWLEENGIEYEFIDYK 29 (110)
T ss_dssp EE-TT-HHHHHHHHHHHHTT--EEEEETT
T ss_pred CcCCCCHHHHHHHHHHHHcCCCeEeehhh
Confidence 89999999999999999999999886653
No 226
>COG0278 Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=86.60 E-value=2.8 Score=29.44 Aligned_cols=66 Identities=12% Similarity=0.118 Sum_probs=44.4
Q ss_pred ecCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEeeCCeeeeecHHHHHH
Q psy13748 7 EIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDGDLIVWDSHAINAY 73 (296)
Q Consensus 7 ~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~~es~~I~~y 73 (296)
.+|-|+++.++--+|.+.|+ .+...++.+..........+.+-=.+.|=|-.+|..+..|.-|.+-
T Consensus 26 ~~P~CGFS~~~vqiL~~~g~-v~~~~vnVL~d~eiR~~lk~~s~WPT~PQLyi~GEfvGG~DIv~Em 91 (105)
T COG0278 26 EFPQCGFSAQAVQILSACGV-VDFAYVDVLQDPEIRQGLKEYSNWPTFPQLYVNGEFVGGCDIVREM 91 (105)
T ss_pred CCCCCCccHHHHHHHHHcCC-cceeEEeeccCHHHHhccHhhcCCCCCceeeECCEEeccHHHHHHH
Confidence 46789999999999999995 3444455554322233333444445777777889888887766654
No 227
>KOG4244|consensus
Probab=77.68 E-value=7.2 Score=32.65 Aligned_cols=38 Identities=21% Similarity=0.184 Sum_probs=33.6
Q ss_pred cccCCCCCccEEEeCCEEeeccHHHHHHHHHHhCCCCC
Q psy13748 134 PQLNPQHTVPTLEDGDLIVWDSHAINAYLVSAYGKNDA 171 (296)
Q Consensus 134 ~~~nP~~~vP~L~~~g~~l~es~aI~~yl~~~~~~~~~ 171 (296)
......|++|-++-||..+++|.-|..+|.++++-...
T Consensus 86 ~~rSr~G~lPFIELNGe~iaDS~~I~~~L~~hf~~~~~ 123 (281)
T KOG4244|consen 86 KRRSRNGTLPFIELNGEHIADSDLIEDRLRKHFKIPDD 123 (281)
T ss_pred eeeccCCCcceEEeCCeeccccHHHHHHHHHHcCCCCC
Confidence 46789999999999999999999999999999975443
No 228
>PF09635 MetRS-N: MetRS-N binding domain; InterPro: IPR018285 This entry represents the N-terminal domain of methionyl-tRNA synthetase (MetRS). This N-terminal appended domain mediates non-catalytic complex formation through its interaction with a domain in the tRNA aminoacylation cofactor Arc1p. The interacting domains of MetRS, GluRS (glutamyl-tRNA synthetase) and Arc1p form a ternary complex resembling a classical GST homo-dimer []. Domain-swapping between symmetrically related MetRS-N and Arc1p-N domains generates a 2:2 tetramer held together by van der Waals forces. This domain is necessary for formation of the aminoacyl-tRNA synthetase complex necessary for tRNA nuclear export and shuttling as part of the translational apparatus. ; PDB: 2HSN_A.
Probab=77.66 E-value=1.1 Score=32.71 Aligned_cols=34 Identities=21% Similarity=0.451 Sum_probs=16.9
Q ss_pred cccCCCCCccEEE--eCCEEeeccHHHHHHHHHHhC
Q psy13748 134 PQLNPQHTVPTLE--DGDLIVWDSHAINAYLVSAYG 167 (296)
Q Consensus 134 ~~~nP~~~vP~L~--~~g~~l~es~aI~~yl~~~~~ 167 (296)
...|+...-|.|. -+|+.++|..||++|+..-|.
T Consensus 28 ~~v~ed~~~~~L~~~~~gF~L~e~NAIvrYl~nDF~ 63 (122)
T PF09635_consen 28 LEVNEDESGPLLKDKKSGFELFEPNAIVRYLANDFE 63 (122)
T ss_dssp -EE-SS--S--EEE-S--S----HHHHHHHHTT--T
T ss_pred eeeCCccccceeeecCCceEEecccHHHHHHHhhcC
Confidence 5667777889995 478999999999999998875
No 229
>TIGR01295 PedC_BrcD bacteriocin transport accessory protein, putative. This model describes a small family of proteins believed to aid in the export of various class II bacteriocins, which are ribosomally-synthesized, non-lantibiotic bacterial peptide antibiotics. Members of this family are found in operons for pediocin PA-1 from Pediococcus acidilactici and brochocin-C from Brochothrix campestris.
Probab=77.21 E-value=13 Score=27.21 Aligned_cols=62 Identities=11% Similarity=-0.021 Sum_probs=33.7
Q ss_pred cEEEecCCCchhHHHH----HHHHHhCCceeEEEeccccc-ccc----hHHHHhhCC----CccccEEe--eCCeee
Q psy13748 3 LILHEIIASPPVRAVK----LCLTELGLEAEYKTCNLLAR-EQF----SDEYLKLNP----QHTVPTLE--DGDLIV 64 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~----~~L~~~gi~~~~~~i~~~~~-~~~----~~~~~~~~p----~~~vP~l~--~~~~~~ 64 (296)
+..++.++||+|+.+. =+.+..++++-.+.++-... +.. -.++.+... -..+|+++ .+|..+
T Consensus 27 iv~f~~~~Cp~C~~~~P~l~~~~~~~~~~~y~vdvd~~~~~~~~~~~~~~~~~~~~~i~~~i~~~PT~v~~k~Gk~v 103 (122)
T TIGR01295 27 TFFIGRKTCPYCRKFSGTLSGVVAQTKAPIYYIDSENNGSFEMSSLNDLTAFRSRFGIPTSFMGTPTFVHITDGKQV 103 (122)
T ss_pred EEEEECCCChhHHHHhHHHHHHHHhcCCcEEEEECCCccCcCcccHHHHHHHHHHcCCcccCCCCCEEEEEeCCeEE
Confidence 4557889999999744 44445556665555552211 011 123443322 33599996 566443
No 230
>cd03029 GRX_hybridPRX5 Glutaredoxin (GRX) family, PRX5 hybrid subfamily; composed of hybrid proteins containing peroxiredoxin (PRX) and GRX domains, which is found in some pathogenic bacteria and cyanobacteria. PRXs are thiol-specific antioxidant (TSA) proteins that confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins. PRX-GRX hybrid proteins from Haemophilus influenza and Neisseria meningitis exhibit GSH-dependent peroxidase activity. The flow of reducing equivalents in the catalytic cycle of the hybrid protein goes from NADPH - GSH reductase - GSH - GRX domain of hybrid - PRX domain of hybrid - peroxide substrate.
Probab=74.64 E-value=2.7 Score=27.43 Aligned_cols=30 Identities=17% Similarity=0.231 Sum_probs=25.1
Q ss_pred cccCCCCCccEEEeCCEEeeccHHHHHHHH
Q psy13748 134 PQLNPQHTVPTLEDGDLIVWDSHAINAYLV 163 (296)
Q Consensus 134 ~~~nP~~~vP~L~~~g~~l~es~aI~~yl~ 163 (296)
.......+||++..||..+.++..|..||+
T Consensus 43 ~~~~g~~~vP~ifi~g~~igg~~~l~~~l~ 72 (72)
T cd03029 43 RAVTGAMTVPQVFIDGELIGGSDDLEKYFA 72 (72)
T ss_pred HHHhCCCCcCeEEECCEEEeCHHHHHHHhC
Confidence 444567799999999999999999998873
No 231
>cd02947 TRX_family TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functio
Probab=72.00 E-value=25 Score=23.11 Aligned_cols=54 Identities=13% Similarity=0.078 Sum_probs=35.3
Q ss_pred cEEEecCCCchhHHHHHHHHH-----hCCceeEEEecccccccchHHHHhhCCCccccEEe--eCCe
Q psy13748 3 LILHEIIASPPVRAVKLCLTE-----LGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLE--DGDL 62 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~-----~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~--~~~~ 62 (296)
+..++.++|+.|....-.+.. .++.+-.+.++ . .+.+.+......+|+++ .+|.
T Consensus 14 ll~~~~~~C~~C~~~~~~~~~~~~~~~~~~~~~i~~~--~----~~~~~~~~~v~~~P~~~~~~~g~ 74 (93)
T cd02947 14 VVDFWAPWCGPCKAIAPVLEELAEEYPKVKFVKVDVD--E----NPELAEEYGVRSIPTFLFFKNGK 74 (93)
T ss_pred EEEEECCCChhHHHhhHHHHHHHHHCCCceEEEEECC--C----ChhHHHhcCcccccEEEEEECCE
Confidence 567788899999988887777 66655444433 2 24444444556799975 4554
No 232
>cd02953 DsbDgamma DsbD gamma family; DsbD gamma is the C-terminal periplasmic domain of the bacterial protein DsbD. It contains a CXXC motif in a TRX fold and shuttles the reducing potential from the membrane domain (DsbD beta) to the N-terminal periplasmic domain (DsbD alpha). DsbD beta, a transmembrane domain comprising of eight helices, acquires its reducing potential from the cytoplasmic thioredoxin. DsbD alpha transfers the acquired reducing potential from DsbD gamma to target proteins such as the periplasmic protein disulphide isomerases, DsbC and DsbG. This flow of reducing potential from the cytoplasm through DsbD allows DsbC and DsbG to act as isomerases in the oxidizing environment of the bacterial periplasm. DsbD also transfers reducing potential from the cytoplasm to specific reductases in the periplasm which are involved in the maturation of cytochromes.
Probab=71.43 E-value=13 Score=25.95 Aligned_cols=55 Identities=7% Similarity=-0.080 Sum_probs=32.5
Q ss_pred cEEEecCCCchhHHHHHHH--------HHhCCceeEEEecccccccchHHHHhhCCCccccEEe
Q psy13748 3 LILHEIIASPPVRAVKLCL--------TELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLE 58 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L--------~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~ 58 (296)
+..|+.++|++|++..-.+ ...+ .+....++........+.+.+...-..+|++.
T Consensus 15 lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~~~~~i~~~Pti~ 77 (104)
T cd02953 15 FVDFTADWCVTCKVNEKVVFSDPEVQAALKK-DVVLLRADWTKNDPEITALLKRFGVFGPPTYL 77 (104)
T ss_pred EEEEEcchhHHHHHHHHHhcCCHHHHHHHhC-CeEEEEEecCCCCHHHHHHHHHcCCCCCCEEE
Confidence 5677889999999775332 1232 45555566533222234555555566799885
No 233
>TIGR03140 AhpF alkyl hydroperoxide reductase, F subunit. This enzyme is the partner of the peroxiredoxin (alkyl hydroperoxide reductase) AhpC which contains the peroxide-reactive cysteine. AhpF contains the reductant (NAD(P)H) binding domain (pfam00070) and presumably acts to resolve the disulfide which forms after oxidation of the active site cysteine in AphC. This proteins contains two paired conserved cysteine motifs, CxxCP and CxHCDGP.
Probab=70.08 E-value=7.3 Score=36.50 Aligned_cols=70 Identities=9% Similarity=-0.005 Sum_probs=44.5
Q ss_pred cEEEecCCCchhHHHHHHHHHhCCc---eeEEEecccccccchHHHHhhCCCccccEEeeCCeeeeec----HHHHHHHH
Q psy13748 3 LILHEIIASPPVRAVKLCLTELGLE---AEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDGDLIVWDS----HAINAYLV 75 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~gi~---~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~~es----~~I~~yl~ 75 (296)
+++|..++||+|-.+.-+++..-+. ++...++ ....++.........||.+..++..+.+. ..+++.+.
T Consensus 121 i~~f~~~~Cp~Cp~~v~~~~~~a~~~p~i~~~~id----~~~~~~~~~~~~v~~VP~~~i~~~~~~~g~~~~~~~~~~l~ 196 (515)
T TIGR03140 121 FETYVSLTCQNCPDVVQALNQMALLNPNISHTMID----GALFQDEVEALGIQGVPAVFLNGEEFHNGRMDLAELLEKLE 196 (515)
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHhCCCceEEEEE----chhCHHHHHhcCCcccCEEEECCcEEEecCCCHHHHHHHHh
Confidence 7899999999999877776555443 2333333 22345556555666999998777665553 33445554
Q ss_pred H
Q psy13748 76 S 76 (296)
Q Consensus 76 ~ 76 (296)
.
T Consensus 197 ~ 197 (515)
T TIGR03140 197 E 197 (515)
T ss_pred h
Confidence 3
No 234
>TIGR03143 AhpF_homolog putative alkyl hydroperoxide reductase F subunit. This family of thioredoxin reductase homologs is found adjacent to alkylhydroperoxide reductase C subunit predominantly in cases where there is only one C subunit in the genome and that genome is lacking the F subunit partner (also a thioredcxin reductase homolog) that is usually found (TIGR03140).
Probab=70.07 E-value=15 Score=34.80 Aligned_cols=57 Identities=16% Similarity=0.091 Sum_probs=39.6
Q ss_pred cEEEecCCCchhHHHHH----HHHHh-CCceeEEEecccccccchHHHHhhCCCccccEEeeCCeeee
Q psy13748 3 LILHEIIASPPVRAVKL----CLTEL-GLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDGDLIVW 65 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~----~L~~~-gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~~ 65 (296)
+++|..++||+|-.+.- +..+. ||..+.+.+.. .++..+...-..||.++.||..+.
T Consensus 480 i~v~~~~~C~~Cp~~~~~~~~~~~~~~~i~~~~i~~~~------~~~~~~~~~v~~vP~~~i~~~~~~ 541 (555)
T TIGR03143 480 IKIGVSLSCTLCPDVVLAAQRIASLNPNVEAEMIDVSH------FPDLKDEYGIMSVPAIVVDDQQVY 541 (555)
T ss_pred EEEEECCCCCCcHHHHHHHHHHHHhCCCceEEEEECcc------cHHHHHhCCceecCEEEECCEEEE
Confidence 68899999999986544 44555 67777666543 245555556678999998776544
No 235
>PF11801 Tom37_C: Tom37 C-terminal domain; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=70.00 E-value=9.4 Score=29.88 Aligned_cols=40 Identities=23% Similarity=0.326 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHcCCC---CCcCCCc-ccchhHhHHHHHHHHHh
Q psy13748 220 RAREALDFAEKFLQGR---KFITGDT-YNIADFSIYTTASALVA 259 (296)
Q Consensus 220 ~~~~~l~~le~~L~~~---~~l~g~~-~t~aD~~~~~~l~~~~~ 259 (296)
...+.+..+++.|++. .|+.|+. +|-.|+.+++.|.....
T Consensus 112 ~a~~~l~~L~~~L~~~~~~~~~f~~~~psslD~L~~ayL~l~l~ 155 (168)
T PF11801_consen 112 LAMECLSLLEELLGEWEEARYFFGDSKPSSLDCLAFAYLALLLV 155 (168)
T ss_pred HHHHHHHHHHHHHhhccccccccCCCCCCHHHHHHHHHHHHHhc
Confidence 3556778888888876 8888887 99999999999986553
No 236
>PRK15317 alkyl hydroperoxide reductase subunit F; Provisional
Probab=69.88 E-value=7.5 Score=36.44 Aligned_cols=71 Identities=11% Similarity=-0.010 Sum_probs=45.4
Q ss_pred cEEEecCCCchhHHHHHHHHHhCCc---eeEEEecccccccchHHHHhhCCCccccEEeeCCeeeeec----HHHHHHHH
Q psy13748 3 LILHEIIASPPVRAVKLCLTELGLE---AEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDGDLIVWDS----HAINAYLV 75 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~gi~---~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~~es----~~I~~yl~ 75 (296)
+++|..++||+|-.+.-+++..-+. ++...++ ....+++........||.+..|+..+.+. ..++..+.
T Consensus 120 i~~fv~~~Cp~Cp~~v~~~~~~a~~~~~i~~~~id----~~~~~~~~~~~~v~~VP~~~i~~~~~~~g~~~~~~~~~~~~ 195 (517)
T PRK15317 120 FETYVSLSCHNCPDVVQALNLMAVLNPNITHTMID----GALFQDEVEARNIMAVPTVFLNGEEFGQGRMTLEEILAKLD 195 (517)
T ss_pred EEEEEcCCCCCcHHHHHHHHHHHHhCCCceEEEEE----chhCHhHHHhcCCcccCEEEECCcEEEecCCCHHHHHHHHh
Confidence 7899999999999776666554442 3333333 23346666666667999998777665542 34555555
Q ss_pred Hh
Q psy13748 76 SA 77 (296)
Q Consensus 76 ~~ 77 (296)
..
T Consensus 196 ~~ 197 (517)
T PRK15317 196 TG 197 (517)
T ss_pred cc
Confidence 43
No 237
>KOG3028|consensus
Probab=69.54 E-value=14 Score=31.66 Aligned_cols=62 Identities=24% Similarity=0.191 Sum_probs=45.9
Q ss_pred cccCCCCCccEEE-eCCEEeeccHHHHHHHHHH---hCCCCCCCCCCHHHHHHHHhHHhhccchhhhHH
Q psy13748 134 PQLNPQHTVPTLE-DGDLIVWDSHAINAYLVSA---YGKNDALYPKDPKVRALVDQRLHFDSGVLFSAL 198 (296)
Q Consensus 134 ~~~nP~~~vP~L~-~~g~~l~es~aI~~yl~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (296)
.-..|.|++|+|+ ++|..++.-.-|..+|... |..+..+ ...+.+....|.++....+.+.+
T Consensus 42 ~~~s~sg~LP~l~~~ng~~va~~~~iv~~L~k~~~ky~~d~dl---~~kq~a~~~a~~sll~~~l~~a~ 107 (313)
T KOG3028|consen 42 PWRSPSGKLPYLITDNGTKVAGPVKIVQFLKKNTKKYNLDADL---SAKQLADTLAFMSLLEENLEPAL 107 (313)
T ss_pred CCCCCCCCCCeEEecCCceeccHHHHHHHHHHhcccCCcCccH---HHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456899999999 6779999999999999873 2222221 26777888888888777776654
No 238
>PF11287 DUF3088: Protein of unknown function (DUF3088); InterPro: IPR021439 This family of proteins with unknown function appears to be restricted to Proteobacteria.
Probab=68.94 E-value=6.3 Score=28.32 Aligned_cols=17 Identities=29% Similarity=0.399 Sum_probs=15.7
Q ss_pred EeeccHHHHHHHHHHhC
Q psy13748 151 IVWDSHAINAYLVSAYG 167 (296)
Q Consensus 151 ~l~es~aI~~yl~~~~~ 167 (296)
.+.+...|++||++.|+
T Consensus 92 fi~d~~~I~~~La~r~g 108 (112)
T PF11287_consen 92 FIDDPRRILRYLAERHG 108 (112)
T ss_pred EeCCHHHHHHHHHHHcC
Confidence 68899999999999997
No 239
>PF09635 MetRS-N: MetRS-N binding domain; InterPro: IPR018285 This entry represents the N-terminal domain of methionyl-tRNA synthetase (MetRS). This N-terminal appended domain mediates non-catalytic complex formation through its interaction with a domain in the tRNA aminoacylation cofactor Arc1p. The interacting domains of MetRS, GluRS (glutamyl-tRNA synthetase) and Arc1p form a ternary complex resembling a classical GST homo-dimer []. Domain-swapping between symmetrically related MetRS-N and Arc1p-N domains generates a 2:2 tetramer held together by van der Waals forces. This domain is necessary for formation of the aminoacyl-tRNA synthetase complex necessary for tRNA nuclear export and shuttling as part of the translational apparatus. ; PDB: 2HSN_A.
Probab=68.26 E-value=3 Score=30.49 Aligned_cols=31 Identities=19% Similarity=0.429 Sum_probs=14.8
Q ss_pred CCccccEEe--eCCeeeeecHHHHHHHHHhcCC
Q psy13748 50 PQHTVPTLE--DGDLIVWDSHAINAYLVSAYGK 80 (296)
Q Consensus 50 p~~~vP~l~--~~~~~~~es~~I~~yl~~~~~~ 80 (296)
....-|-|. .+|+.+.|+.||++|+..-|..
T Consensus 32 ed~~~~~L~~~~~gF~L~e~NAIvrYl~nDF~~ 64 (122)
T PF09635_consen 32 EDESGPLLKDKKSGFELFEPNAIVRYLANDFEG 64 (122)
T ss_dssp SS--S--EEE-S--S----HHHHHHHHTT--TT
T ss_pred CccccceeeecCCceEEecccHHHHHHHhhcCC
Confidence 333457784 5789999999999999987754
No 240
>KOG2501|consensus
Probab=66.75 E-value=17 Score=27.97 Aligned_cols=45 Identities=22% Similarity=0.083 Sum_probs=31.0
Q ss_pred cEEEecC-CCchhH-------HHHHHHHHhCCceeEEEecccccccchHHHHh
Q psy13748 3 LILHEII-ASPPVR-------AVKLCLTELGLEAEYKTCNLLAREQFSDEYLK 47 (296)
Q Consensus 3 ~~Ly~~~-~s~~~~-------~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~ 47 (296)
+.||+.. +||.|+ ...-.+...+-+|++++|+-...++...+|..
T Consensus 36 V~lyFsA~wC~pCR~FTP~Lk~fYe~l~~~~~~fEVvfVS~D~~~~~~~~y~~ 88 (157)
T KOG2501|consen 36 VGLYFSAHWCPPCRDFTPILKDFYEELKDNAAPFEVVFVSSDRDEESLDEYML 88 (157)
T ss_pred EEEEEEEEECCchhhCCchHHHHHHHHHhcCCceEEEEEecCCCHHHHHHHHH
Confidence 4566543 788887 55666777888999999987665444455554
No 241
>cd02949 TRX_NTR TRX domain, novel NADPH thioredoxin reductase (NTR) family; composed of fusion proteins found only in oxygenic photosynthetic organisms containing both TRX and NTR domains. The TRX domain functions as a protein disulfide reductase via the reversible oxidation of an active center dithiol present in a CXXC motif, while the NTR domain functions as a reductant to oxidized TRX. The fusion protein is bifunctional, showing both TRX and NTR activities, but it is not an independent NTR/TRX system. In plants, the protein is found exclusively in shoots and mature leaves and is localized in the chloroplast. It is involved in plant protection against oxidative stress.
Probab=66.41 E-value=34 Score=23.50 Aligned_cols=58 Identities=17% Similarity=0.232 Sum_probs=34.5
Q ss_pred cEEEecCCCchhHHHHHHHHH----hCCceeEEEecccccccchHHHHhhCCCccccEEe--eCCeee
Q psy13748 3 LILHEIIASPPVRAVKLCLTE----LGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLE--DGDLIV 64 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~----~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~--~~~~~~ 64 (296)
+.+|+.++|+.|....-.+.. .+-.+....+|... .+++.+..--..+|++. .+|..+
T Consensus 17 lv~f~a~~C~~C~~~~~~l~~l~~~~~~~v~~~~id~d~----~~~l~~~~~v~~vPt~~i~~~g~~v 80 (97)
T cd02949 17 LVLYTSPTCGPCRTLKPILNKVIDEFDGAVHFVEIDIDE----DQEIAEAAGIMGTPTVQFFKDKELV 80 (97)
T ss_pred EEEEECCCChhHHHHHHHHHHHHHHhCCceEEEEEECCC----CHHHHHHCCCeeccEEEEEECCeEE
Confidence 567788999999987766654 11124444555432 24444444446889875 566544
No 242
>KOG3029|consensus
Probab=65.07 E-value=55 Score=27.86 Aligned_cols=29 Identities=24% Similarity=0.137 Sum_probs=24.3
Q ss_pred CCCccEEEeCCEEeeccHHHHHHHHHHhC
Q psy13748 139 QHTVPTLEDGDLIVWDSHAINAYLVSAYG 167 (296)
Q Consensus 139 ~~~vP~L~~~g~~l~es~aI~~yl~~~~~ 167 (296)
-.+||+|...|..+.||.+|+.-|+....
T Consensus 134 ykKVPil~~~Geqm~dSsvIIs~laTyLq 162 (370)
T KOG3029|consen 134 YKKVPILLIRGEQMVDSSVIISLLATYLQ 162 (370)
T ss_pred cccccEEEeccceechhHHHHHHHHHHhc
Confidence 45999999767789999999998877663
No 243
>TIGR02196 GlrX_YruB Glutaredoxin-like protein, YruB-family. This glutaredoxin-like protein family contains the conserved CxxC motif and includes the Clostridium pasteurianum protein YruB which has been cloned from a rubredoxin operon. Somewhat related to NrdH, it is unknown whether this protein actually interacts with glutathione/glutathione reducatase, or, like NrdH, some other reductant system.
Probab=64.41 E-value=6.3 Score=25.19 Aligned_cols=29 Identities=24% Similarity=0.417 Sum_probs=21.1
Q ss_pred cccCCCCCccEEEeCCEEe--eccHHHHHHH
Q psy13748 134 PQLNPQHTVPTLEDGDLIV--WDSHAINAYL 162 (296)
Q Consensus 134 ~~~nP~~~vP~L~~~g~~l--~es~aI~~yl 162 (296)
...++.+.||+++.+|..+ ++..+|.+++
T Consensus 43 ~~~~~~~~vP~~~~~~~~~~g~~~~~i~~~i 73 (74)
T TIGR02196 43 LKVLGQRGVPVIVIGHKIIVGFDPEKLDQLL 73 (74)
T ss_pred HHHhCCCcccEEEECCEEEeeCCHHHHHHHh
Confidence 6778899999999888766 4555555443
No 244
>cd02989 Phd_like_TxnDC9 Phosducin (Phd)-like family, Thioredoxin (TRX) domain containing protein 9 (TxnDC9) subfamily; composed of predominantly uncharacterized eukaryotic proteins, containing a TRX-like domain without the redox active CXXC motif. The gene name for the human protein is TxnDC9. The two characterized members are described as Phd-like proteins, PLP1 of Saccharomyces cerevisiae and PhLP3 of Dictyostelium discoideum. Gene disruption experiments show that both PLP1 and PhLP3 are non-essential proteins. Unlike Phd and most Phd-like proteins, members of this group do not contain the Phd N-terminal helical domain which is implicated in binding to the G protein betagamma subunit.
Probab=59.62 E-value=63 Score=23.17 Aligned_cols=57 Identities=11% Similarity=-0.051 Sum_probs=36.7
Q ss_pred cEEEecCCCchhHHHHHHHHH-----hCCceeEEEecccccccchHHHHhhCCCccccEEe--eCCeeee
Q psy13748 3 LILHEIIASPPVRAVKLCLTE-----LGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLE--DGDLIVW 65 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~-----~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~--~~~~~~~ 65 (296)
+..++.++|+.|+.+.-.+.. .++ ....||..+ .++..+...-..+|+++ .+|..+.
T Consensus 26 vV~f~a~~c~~C~~~~p~l~~la~~~~~i--~f~~Vd~~~----~~~l~~~~~v~~vPt~l~fk~G~~v~ 89 (113)
T cd02989 26 VCHFYHPEFFRCKIMDKHLEILAKKHLET--KFIKVNAEK----APFLVEKLNIKVLPTVILFKNGKTVD 89 (113)
T ss_pred EEEEECCCCccHHHHHHHHHHHHHHcCCC--EEEEEEccc----CHHHHHHCCCccCCEEEEEECCEEEE
Confidence 456778899999977766644 233 445555432 34455555667899986 6776554
No 245
>PRK10638 glutaredoxin 3; Provisional
Probab=56.79 E-value=12 Score=25.10 Aligned_cols=32 Identities=13% Similarity=0.011 Sum_probs=25.7
Q ss_pred CccccccCCCCCccEEEeCCEEeeccHHHHHHH
Q psy13748 130 INFSPQLNPQHTVPTLEDGDLIVWDSHAINAYL 162 (296)
Q Consensus 130 ~~~~~~~nP~~~vP~L~~~g~~l~es~aI~~yl 162 (296)
.++ ...++.++||++..||..+-....+.++-
T Consensus 42 ~~l-~~~~g~~~vP~i~~~g~~igG~~~~~~~~ 73 (83)
T PRK10638 42 EEM-IKRSGRTTVPQIFIDAQHIGGCDDLYALD 73 (83)
T ss_pred HHH-HHHhCCCCcCEEEECCEEEeCHHHHHHHH
Confidence 344 78889999999999999888877776654
No 246
>PF00043 GST_C: Glutathione S-transferase, C-terminal domain; InterPro: IPR004046 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of cephalopods is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold. Each monomer is composed of a distinct N-terminal sub-domain, which adopts the thioredoxin fold, and a C-terminal all-helical sub-domain. This entry is the C-terminal domain.; PDB: 3UAP_A 3UAR_A 3QAV_A 3QAW_A 1Y6E_A 1U88_B 4AI6_B 1UA5_A 4AKH_A 3QMZ_S ....
Probab=55.96 E-value=9.2 Score=26.09 Aligned_cols=40 Identities=20% Similarity=0.253 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHcCC-CCCcCCCcccchhHhHHHHHHHHHhh
Q psy13748 221 AREALDFAEKFLQG-RKFITGDTYNIADFSIYTTASALVAL 260 (296)
Q Consensus 221 ~~~~l~~le~~L~~-~~~l~g~~~t~aD~~~~~~l~~~~~~ 260 (296)
.......+.+.|+. .+.|.|..+.+||-.+++|+..+..+
T Consensus 26 ~~~~~~~~~~~l~~le~~l~~~~~l~G~~~t~ADi~~~~~~ 66 (95)
T PF00043_consen 26 VEEARAKVPRYLEVLEKRLKGGPYLVGDKLTIADIALFPML 66 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSSSSSBSS-CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCeeeccCCchhHHHHHHHH
Confidence 33334444444432 23777899999999999999887765
No 247
>PF13410 GST_C_2: Glutathione S-transferase, C-terminal domain; PDB: 4DEJ_H 3IC8_A 2JL4_A 2V6K_B 3CBU_B 1JLW_B 3F6D_B 3G7I_A 3F63_A 3G7J_B ....
Probab=54.20 E-value=16 Score=23.26 Aligned_cols=42 Identities=19% Similarity=0.146 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCcCCCcccchhHhHHHHHHHHHhhC
Q psy13748 218 KLRAREALDFAEKFLQGRKFITGDTYNIADFSIYTTASALVALV 261 (296)
Q Consensus 218 ~~~~~~~l~~le~~L~~~~~l~g~~~t~aD~~~~~~l~~~~~~~ 261 (296)
.+.....+...-+.|+. .|.+..+.+||-.+++|+.....+.
T Consensus 4 ~~~~~~~~~~~l~~le~--~L~~~~fl~G~~~s~aD~~l~~~l~ 45 (69)
T PF13410_consen 4 VERARAQLEAALDALED--HLADGPFLFGDRPSLADIALAPFLW 45 (69)
T ss_dssp HHHHHHHHHHHHHHHHH--HHTTSSBTTBSS--HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH--HHhhCCCCCCCCCCHHHHHHHHHHH
Confidence 34444444444445554 7777779999999999998877663
No 248
>PF01323 DSBA: DSBA-like thioredoxin domain; InterPro: IPR001853 DSBA is a sub-family of the Thioredoxin family []. The efficient and correct folding of bacterial disulphide bonded proteins in vivo is dependent upon a class of periplasmic oxidoreductase proteins called DsbA, after the Escherichia coli enzyme. The bacterial protein-folding factor DsbA is the most oxidizing of the thioredoxin family. DsbA catalyses disulphide-bond formation during the folding of secreted proteins. The extremely oxidizing nature of DsbA has been proposed to result from either domain motion or stabilising active-site interactions in the reduced form. DsbA's highly oxidizing nature is a result of hydrogen bond, electrostatic and helix-dipole interactions that favour the thiolate over the disulphide at the active site []. In the pathogenic bacterium Vibrio cholerae, the DsbA homologue (TcpG) is responsible for the folding, maturation and secretion of virulence factors. While the overall architecture of TcpG and DsbA is similar and the surface features are retained in TcpG, there are significant differences. For example, the kinked active site helix results from a three-residue loop in DsbA, but is caused by a proline in TcpG (making TcpG more similar to thioredoxin in this respect). Furthermore, the proposed peptide binding groove of TcpG is substantially shortened compared with that of DsbA due to a six-residue deletion. Also, the hydrophobic pocket of TcpG is more shallow and the acidic patch is much less extensive than that of E. coli DsbA [].; GO: 0015035 protein disulfide oxidoreductase activity; PDB: 3GL5_A 3DKS_D 3RPP_C 3RPN_B 1YZX_A 3L9V_C 2IMD_A 2IME_A 2IMF_A 2B3S_B ....
Probab=48.71 E-value=30 Score=27.18 Aligned_cols=35 Identities=14% Similarity=0.129 Sum_probs=28.3
Q ss_pred cEEEecCCCchhH----HHHHHHHHh-CCceeEEEecccc
Q psy13748 3 LILHEIIASPPVR----AVKLCLTEL-GLEAEYKTCNLLA 37 (296)
Q Consensus 3 ~~Ly~~~~s~~~~----~v~~~L~~~-gi~~~~~~i~~~~ 37 (296)
+++|+...||||. +++-+++.. |+.++.+++.+..
T Consensus 2 i~~~~D~~Cp~cy~~~~~l~~l~~~~~~~~i~~~p~~l~~ 41 (193)
T PF01323_consen 2 IEFFFDFICPWCYLASPRLRKLRAEYPDVEIEWRPFPLRP 41 (193)
T ss_dssp EEEEEBTTBHHHHHHHHHHHHHHHHHTTCEEEEEEESSST
T ss_pred EEEEEeCCCHHHHHHHHHHHHHHHHhcCCcEEEecccccc
Confidence 6889999999998 556666777 8999999987643
No 249
>cd02975 PfPDO_like_N Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO)-like family, N-terminal TRX-fold subdomain; composed of proteins with similarity to PfPDO, a redox active thermostable protein believed to be the archaeal counterpart of bacterial DsbA and eukaryotic protein disulfide isomerase (PDI), which are both involved in oxidative protein folding. PfPDO contains two redox active CXXC motifs in two contiguous TRX-fold subdomains. The active site in the N-terminal TRX-fold subdomain is required for isomerase but not for reductase activity of PfPDO. The exclusive presence of PfPDO-like proteins in extremophiles may suggest that they have a special role in adaptation to extreme conditions.
Probab=46.12 E-value=62 Score=23.18 Aligned_cols=52 Identities=17% Similarity=0.094 Sum_probs=31.8
Q ss_pred cEEE-ecCCCchhHHHHHHHHHhCCc---eeEEEecccccccchHHHHhhCCCccccEEe
Q psy13748 3 LILH-EIIASPPVRAVKLCLTELGLE---AEYKTCNLLAREQFSDEYLKLNPQHTVPTLE 58 (296)
Q Consensus 3 ~~Ly-~~~~s~~~~~v~~~L~~~gi~---~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~ 58 (296)
++++ +.++|++|+.++-+|....-. .+...++... .++....-.-..+|++.
T Consensus 25 vvv~f~a~wC~~C~~~~~~l~~la~~~~~i~~~~vd~d~----~~~l~~~~~v~~vPt~~ 80 (113)
T cd02975 25 LVVFSSKEGCQYCEVTKQLLEELSELSDKLKLEIYDFDE----DKEKAEKYGVERVPTTI 80 (113)
T ss_pred EEEEeCCCCCCChHHHHHHHHHHHHhcCceEEEEEeCCc----CHHHHHHcCCCcCCEEE
Confidence 4455 457999999887777654422 2334444322 34555555667899986
No 250
>cd03188 GST_C_Beta GST_C family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site for
Probab=44.51 E-value=26 Score=24.64 Aligned_cols=23 Identities=22% Similarity=0.247 Sum_probs=11.1
Q ss_pred CcCCCcccchhHhHHHHHHHHHh
Q psy13748 237 FITGDTYNIADFSIYTTASALVA 259 (296)
Q Consensus 237 ~l~g~~~t~aD~~~~~~l~~~~~ 259 (296)
.|.++.+.+||.++++|+..+..
T Consensus 58 ~l~~~~~l~G~~~t~aDi~~~~~ 80 (114)
T cd03188 58 QLAGGPYLLGDRFSVADAYLFVV 80 (114)
T ss_pred HhcCCCeeeCCCcchHHHHHHHH
Confidence 44444455555555555544433
No 251
>cd02984 TRX_PICOT TRX domain, PICOT (for PKC-interacting cousin of TRX) subfamily; PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes. PICOT contains an N-terminal TRX-like domain, which does not contain the catalytic CXXC motif, followed by one to three glutaredoxin domains. The TRX-like domain is required for interaction with PKC theta. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli.
Probab=42.65 E-value=1e+02 Score=20.73 Aligned_cols=58 Identities=16% Similarity=0.085 Sum_probs=34.2
Q ss_pred cEEEecCCCchhHHHHHHHHHh----CCceeEEEecccccccchHHHHhhCCCccccEEe--eCCeee
Q psy13748 3 LILHEIIASPPVRAVKLCLTEL----GLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLE--DGDLIV 64 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~----gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~--~~~~~~ 64 (296)
+..++.++|+.|++..-.|... +-.+....++... .++..+...-..+|+++ .+|..+
T Consensus 18 ~v~f~~~~C~~C~~~~~~l~~l~~~~~~~i~~~~vd~~~----~~~~~~~~~i~~~Pt~~~~~~g~~~ 81 (97)
T cd02984 18 VLHFWAPWAEPCKQMNQVFEELAKEAFPSVLFLSIEAEE----LPEISEKFEITAVPTFVFFRNGTIV 81 (97)
T ss_pred EEEEECCCCHHHHHHhHHHHHHHHHhCCceEEEEEcccc----CHHHHHhcCCccccEEEEEECCEEE
Confidence 4567788999999877666542 3345555555422 23343333345699885 556543
No 252
>TIGR02183 GRXA Glutaredoxin, GrxA family. This model includes the E. coli glyutaredoxin GrxA which appears to have primary responsibility for the reduction of ribonucleotide reductase.
Probab=42.28 E-value=38 Score=22.93 Aligned_cols=29 Identities=14% Similarity=0.149 Sum_probs=25.4
Q ss_pred CCCccEEEeCCEEeeccHHHHHHHHHHhC
Q psy13748 139 QHTVPTLEDGDLIVWDSHAINAYLVSAYG 167 (296)
Q Consensus 139 ~~~vP~L~~~g~~l~es~aI~~yl~~~~~ 167 (296)
...||++..||..+-.+..|..++.+.++
T Consensus 55 ~~tVP~ifi~g~~igG~~dl~~~~~~~~~ 83 (86)
T TIGR02183 55 VETVPQIFVDEKHVGGCTDFEQLVKENFD 83 (86)
T ss_pred CCCcCeEEECCEEecCHHHHHHHHHhccc
Confidence 35899999999999999999999887665
No 253
>KOG3027|consensus
Probab=41.96 E-value=73 Score=25.83 Aligned_cols=32 Identities=19% Similarity=0.268 Sum_probs=28.3
Q ss_pred ccCCCCCccEEEeCCEEeeccHHHHHHHHHHh
Q psy13748 135 QLNPQHTVPTLEDGDLIVWDSHAINAYLVSAY 166 (296)
Q Consensus 135 ~~nP~~~vP~L~~~g~~l~es~aI~~yl~~~~ 166 (296)
-.+|.|+||.|.-|...++|-.+|..+...+-
T Consensus 61 fmSP~G~vPllr~g~~~~aef~pIV~fVeak~ 92 (257)
T KOG3027|consen 61 FMSPGGKVPLLRIGKTLFAEFEPIVDFVEAKG 92 (257)
T ss_pred ccCCCCCCceeeecchhhhhhhHHHHHHHHhc
Confidence 36799999999999999999999999987654
No 254
>PF00085 Thioredoxin: Thioredoxin; InterPro: IPR013766 Thioredoxins [, , , ] are small disulphide-containing redox proteins that have been found in all the kingdoms of living organisms. Thioredoxin serves as a general protein disulphide oxidoreductase. It interacts with a broad range of proteins by a redox mechanism based on reversible oxidation of two cysteine thiol groups to a disulphide, accompanied by the transfer of two electrons and two protons. The net result is the covalent interconversion of a disulphide and a dithiol. In the NADPH-dependent protein disulphide reduction, thioredoxin reductase (TR) catalyses the reduction of oxidised thioredoxin (trx) by NADPH using FAD and its redox-active disulphide; reduced thioredoxin then directly reduces the disulphide in the substrate protein []. Thioredoxin is present in prokaryotes and eukaryotes and the sequence around the redox-active disulphide bond is well conserved. All thioredoxins contain a cis-proline located in a loop preceding beta-strand 4, which makes contact with the active site cysteines, and is important for stability and function []. Thioredoxin belongs to a structural family that includes glutaredoxin, glutathione peroxidase, bacterial protein disulphide isomerase DsbA, and the N-terminal domain of glutathione transferase []. Thioredoxins have a beta-alpha unit preceding the motif common to all these proteins. A number of eukaryotic proteins contain domains evolutionary related to thioredoxin, most of them are protein disulphide isomerases (PDI). PDI (5.3.4.1 from EC) [, , ] is an endoplasmic reticulum multi-functional enzyme that catalyses the formation and rearrangement of disulphide bonds during protein folding []. All PDI contains two or three (ERp72) copies of the thioredoxin domain, each of which contributes to disulphide isomerase activity, but which are functionally non-equivalent []. Moreover, PDI exhibits chaperone-like activity towards proteins that contain no disulphide bonds, i.e. behaving independently of its disulphide isomerase activity []. The various forms of PDI which are currently known are: PDI major isozyme; a multifunctional protein that also function as the beta subunit of prolyl 4-hydroxylase (1.14.11.2 from EC), as a component of oligosaccharyl transferase (2.4.1.119 from EC), as thyroxine deiodinase (3.8.1.4 from EC), as glutathione-insulin transhydrogenase (1.8.4.2 from EC) and as a thyroid hormone-binding protein ERp60 (ER-60; 58 Kd microsomal protein). ERp60 was originally thought to be a phosphoinositide-specific phospholipase C isozyme and later to be a protease. ERp72. ERp5. Bacterial proteins that act as thiol:disulphide interchange proteins that allows disulphide bond formation in some periplasmic proteins also contain a thioredoxin domain. These proteins include: Escherichia coli DsbA (or PrfA) and its orthologs in Vibrio cholerae (TtcpG) and Haemophilus influenzae (Por). E. coli DsbC (or XpRA) and its orthologues in Erwinia chrysanthemi and H. influenzae. E. coli DsbD (or DipZ) and its H. influenzae orthologue. E. coli DsbE (or CcmG) and orthologues in H. influenzae. Rhodobacter capsulatus (Rhodopseudomonas capsulata) (HelX), Rhiziobiacae (CycY and TlpA). This entry represents the thioredoxin domain.; GO: 0045454 cell redox homeostasis; PDB: 3ED3_B 1EP7_A 1EP8_B 1TOF_A 2OE3_B 2OE1_B 2OE0_B 1V98_A 3H79_A 3CXG_A ....
Probab=41.90 E-value=1.1e+02 Score=20.72 Aligned_cols=69 Identities=17% Similarity=0.223 Sum_probs=40.7
Q ss_pred cEEEecCCCchhHHHHHHHHHh----CCceeEEEecccccccchHHHHhhCCCccccEEe--eCCeeee------ecHHH
Q psy13748 3 LILHEIIASPPVRAVKLCLTEL----GLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLE--DGDLIVW------DSHAI 70 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~----gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~--~~~~~~~------es~~I 70 (296)
+..++.++|+.|+...-.+... +-.+....+|... .+.+.+...-..+|++. .+|..+. +...|
T Consensus 21 vv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~----~~~l~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l 96 (103)
T PF00085_consen 21 VVYFYAPWCPPCKAFKPILEKLAKEYKDNVKFAKVDCDE----NKELCKKYGVKSVPTIIFFKNGKEVKRYNGPRNAESL 96 (103)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHHHHTTTTSEEEEEETTT----SHHHHHHTTCSSSSEEEEEETTEEEEEEESSSSHHHH
T ss_pred EEEEeCCCCCccccccceecccccccccccccchhhhhc----cchhhhccCCCCCCEEEEEECCcEEEEEECCCCHHHH
Confidence 5677888999999777444222 2144555555432 34555555677899986 5664432 33455
Q ss_pred HHHHH
Q psy13748 71 NAYLV 75 (296)
Q Consensus 71 ~~yl~ 75 (296)
..+|.
T Consensus 97 ~~~i~ 101 (103)
T PF00085_consen 97 IEFIE 101 (103)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55554
No 255
>PHA02278 thioredoxin-like protein
Probab=41.67 E-value=1.2e+02 Score=21.31 Aligned_cols=63 Identities=16% Similarity=0.130 Sum_probs=33.4
Q ss_pred cEEEecCCCchhHHHHHHHHHh----CCceeEEEecccccccchHHHHhhCCCccccEEe--eCCeeee
Q psy13748 3 LILHEIIASPPVRAVKLCLTEL----GLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLE--DGDLIVW 65 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~----gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~--~~~~~~~ 65 (296)
+.-|+.++|+.|+...=.+... +.......++........++..+..--..+|+++ .||..+.
T Consensus 18 vV~F~A~WCgpCk~m~p~l~~l~~~~~~~~~~~~vdvd~~~~d~~~l~~~~~I~~iPT~i~fk~G~~v~ 86 (103)
T PHA02278 18 IVMITQDNCGKCEILKSVIPMFQESGDIKKPILTLNLDAEDVDREKAVKLFDIMSTPVLIGYKDGQLVK 86 (103)
T ss_pred EEEEECCCCHHHHhHHHHHHHHHhhhcCCceEEEEECCccccccHHHHHHCCCccccEEEEEECCEEEE
Confidence 3456778999999666444332 2222344444432111123444444556789986 5676553
No 256
>PRK09266 hypothetical protein; Provisional
Probab=41.65 E-value=56 Score=27.54 Aligned_cols=60 Identities=22% Similarity=0.225 Sum_probs=42.9
Q ss_pred HHHHhCCceeEEEecccccccchHHHHhhCCCccccEEeeCCeeeeecHHHHHHHHHhcC
Q psy13748 20 CLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDGDLIVWDSHAINAYLVSAYG 79 (296)
Q Consensus 20 ~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~~es~~I~~yl~~~~~ 79 (296)
.+...|++++...+++.+-...+..|+--+-.|-+||-..|+..+.+...+.+.|.+.|.
T Consensus 200 ~~~~~g~~v~e~~i~~~eL~~adevfltnSl~gi~pV~~i~~~~~~~~~~~~~~l~~~~~ 259 (266)
T PRK09266 200 GLERLGIPQRTRPVTLADLGRFAGAFACNAWRGQRAVSAIDDVALPDSHALLELLRRAYE 259 (266)
T ss_pred HHHHcCCeeEEEECCHHHHHHhhHhhhhcCccceEEEEEECCEECCCCchHHHHHHHHHH
Confidence 456679999999988754334445566545568899998888777666678888877664
No 257
>cd04911 ACT_AKiii-YclM-BS_1 ACT domains located C-terminal to the catalytic domain of the lysine plus threonine-sensitive aspartokinase isoenzyme AKIII. This CD includes the first of two ACT domains located C-terminal to the catalytic domain of the lysine plus threonine-sensitive aspartokinase isoenzyme AKIII, a monofunctional class enzyme found in Bacilli (Bacillus subtilis (BS) YclM) and Clostridia species. Aspartokinase is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. Bacillus subtilis YclM is reported to be a single polypeptide of 50 kD. AKIII from Bacillus subtilis strain 168 is induced by lysine and repressed by threonine and it is synergistically inhibited by lysine and threonine. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=40.42 E-value=30 Score=23.07 Aligned_cols=25 Identities=16% Similarity=0.038 Sum_probs=21.1
Q ss_pred CCchhHHHHHHHHHhCCceeEEEec
Q psy13748 10 ASPPVRAVKLCLTELGLEAEYKTCN 34 (296)
Q Consensus 10 ~s~~~~~v~~~L~~~gi~~~~~~i~ 34 (296)
.-++++|+.-+|+..|++|+..+-.
T Consensus 14 evGF~rk~L~I~E~~~is~Eh~PSG 38 (76)
T cd04911 14 EVGFGRKLLSILEDNGISYEHMPSG 38 (76)
T ss_pred hhcHHHHHHHHHHHcCCCEeeecCC
Confidence 4568999999999999999987643
No 258
>TIGR02187 GlrX_arch Glutaredoxin-like domain protein. This family of archaeal proteins contains a C-terminal domain with homology to bacterial and eukaryotic glutaredoxins, including a CPYC motif. There is an N-terminal domain which has even more distant homology to glutaredoxins. The name "glutaredoxin" may be inappropriate in the sense of working in tandem with glutathione and glutathione reductase which may not be present in the archaea. The overall domain structure appears to be related to bacterial alkylhydroperoxide reductases, but the homology may be distant enough that the function of this family is wholly different.
Probab=39.95 E-value=87 Score=25.39 Aligned_cols=53 Identities=9% Similarity=0.009 Sum_probs=32.9
Q ss_pred cEEEecCCCchhHHHHHHHHHhCC---ceeEEEecccccccchHHHHhhCCCccccEEee
Q psy13748 3 LILHEIIASPPVRAVKLCLTELGL---EAEYKTCNLLAREQFSDEYLKLNPQHTVPTLED 59 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~gi---~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~ 59 (296)
+++|+.++|++|..+.-++...-- ......+|... .++..+...-..+|+++.
T Consensus 137 I~~F~a~~C~~C~~~~~~l~~l~~~~~~i~~~~vD~~~----~~~~~~~~~V~~vPtl~i 192 (215)
T TIGR02187 137 IEVFVTPTCPYCPYAVLMAHKFALANDKILGEMIEANE----NPDLAEKYGVMSVPKIVI 192 (215)
T ss_pred EEEEECCCCCCcHHHHHHHHHHHHhcCceEEEEEeCCC----CHHHHHHhCCccCCEEEE
Confidence 567899999999988777665321 12333455432 344444455567999973
No 259
>cd02963 TRX_DnaJ TRX domain, DnaJ domain containing protein family; composed of uncharacterized proteins of about 500-800 amino acids, containing an N-terminal DnaJ domain followed by one redox active TRX domain. DnaJ is a member of the 40 kDa heat-shock protein (Hsp40) family of molecular chaperones, which regulate the activity of Hsp70s. TRX is involved in the redox regulation of many protein substrates through the reduction of disulfide bonds. TRX has been implicated to catalyse the reduction of Hsp33, a chaperone holdase that binds to unfolded protein intermediates. The presence of DnaJ and TRX domains in members of this family suggests that they could be involved in a redox-regulated chaperone network.
Probab=39.89 E-value=1.3e+02 Score=21.20 Aligned_cols=57 Identities=14% Similarity=-0.019 Sum_probs=31.6
Q ss_pred cEEEecCCCchhHHHHHHH-----HHhCCceeEEEecccccccchHHHHhhCCCccccEEe--eCCee
Q psy13748 3 LILHEIIASPPVRAVKLCL-----TELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLE--DGDLI 63 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L-----~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~--~~~~~ 63 (296)
+..++.++|+.|+...-.+ ...|..+....++... .+...+...-..+|+++ .+|..
T Consensus 28 lV~F~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~d~----~~~l~~~~~V~~~Pt~~i~~~g~~ 91 (111)
T cd02963 28 LIKITSDWCFSCIHIEPVWKEVIQELEPLGVGIATVNAGH----ERRLARKLGAHSVPAIVGIINGQV 91 (111)
T ss_pred EEEEECCccHhHHHhhHHHHHHHHHHHhcCceEEEEeccc----cHHHHHHcCCccCCEEEEEECCEE
Confidence 5567888999997554332 2223234444555432 23344444557899885 55643
No 260
>COG0435 ECM4 Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=39.52 E-value=53 Score=27.92 Aligned_cols=107 Identities=23% Similarity=0.261 Sum_probs=71.2
Q ss_pred cEEEecCCCchhHHHHHHHHHhCCce--eEEEeccc---ccccc------------------hHHHHhhCC----Ccccc
Q psy13748 3 LILHEIIASPPVRAVKLCLTELGLEA--EYKTCNLL---AREQF------------------SDEYLKLNP----QHTVP 55 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~gi~~--~~~~i~~~---~~~~~------------------~~~~~~~~p----~~~vP 55 (296)
+.||..-.|||++|..++=+.||++= ....+... ++... .+-|.+..| .-+||
T Consensus 52 YhLYvslaCPWAHRTLI~R~LkgLE~~Isvsvv~~~m~~~GW~F~~~~~g~t~dpl~g~~~L~~~Y~~adP~YsgRvTVP 131 (324)
T COG0435 52 YHLYVSLACPWAHRTLIFRALKGLEPVISVSVVHPLMDENGWTFDPEFPGATGDPLYGIERLSQLYTRADPDYSGRVTVP 131 (324)
T ss_pred EEEEEEecCchHHHHHHHHHHhcccccceEEEecccccCCCceEcCCCCCCCCCcccchhHHHHHHhhcCCCCCCceeEE
Confidence 78999999999999999999999961 12222111 11111 112333333 23799
Q ss_pred EEeeC--Ce-eeeecHHHHHHHHHhcC----CCCCCCCCCHHHHHHHhhhhhccccchhhhhh
Q psy13748 56 TLEDG--DL-IVWDSHAINAYLVSAYG----KNDALYPKDPKVRALVDQRLHFDSGVLFSALR 111 (296)
Q Consensus 56 ~l~~~--~~-~~~es~~I~~yl~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (296)
||-|- .+ +-.||..|++-+...|. +...|+| .+-|.+++.|..++...+.+...
T Consensus 132 VLwDk~~~tIVnNES~eIirm~N~aFde~~~~~~dlyP--~~Lr~eId~~n~~Iy~~vNNGVY 192 (324)
T COG0435 132 VLWDKKTQTIVNNESAEIIRMFNSAFDEFGASAVDLYP--EALRTEIDELNKWIYDTVNNGVY 192 (324)
T ss_pred EEEecCCCeeecCCcHHHHHHHHHHHHHHhhhccccCC--HHHHHHHHHHHhhhcccccCcee
Confidence 99753 33 34599999999987663 2345777 67799999999999887765433
No 261
>cd02959 ERp19 Endoplasmic reticulum protein 19 (ERp19) family; ERp19 is also known as ERp18, a protein located in the ER containing one redox active TRX domain. Denaturation studies indicate that the reduced form is more stable than the oxidized form, suggesting that the protein is involved in disulfide bond formation. In vitro, ERp19 has been shown to possess thiol-disulfide oxidase activity which is dependent on the presence of both active site cysteines. Although described as protein disulfide isomerase (PDI)-like, the protein does not complement for PDI activity. ERp19 shows a wide tissue distribution but is most abundant in liver, testis, heart and kidney.
Probab=39.36 E-value=55 Score=23.67 Aligned_cols=60 Identities=18% Similarity=0.195 Sum_probs=31.9
Q ss_pred cEEEecCCCchhHHHHHHHHH------hCCceeEEEecccccccchHHHHhhCCCc-cccEEe--e-CCeeeee
Q psy13748 3 LILHEIIASPPVRAVKLCLTE------LGLEAEYKTCNLLAREQFSDEYLKLNPQH-TVPTLE--D-GDLIVWD 66 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~------~gi~~~~~~i~~~~~~~~~~~~~~~~p~~-~vP~l~--~-~~~~~~e 66 (296)
+..++.++|++|++..-.+.. .+..| +.+++..... +.-...+..| .+|+++ + +|..+..
T Consensus 23 lV~F~a~WC~~C~~~~~~~~~~~~~~~~~~~f--v~v~vd~~~~--~~~~~~~~~g~~vPt~~f~~~~Gk~~~~ 92 (117)
T cd02959 23 MLLIHKTWCGACKALKPKFAESKEISELSHNF--VMVNLEDDEE--PKDEEFSPDGGYIPRILFLDPSGDVHPE 92 (117)
T ss_pred EEEEeCCcCHHHHHHHHHHhhhHHHHhhcCcE--EEEEecCCCC--chhhhcccCCCccceEEEECCCCCCchh
Confidence 445677899999977555444 22234 3344432211 1112345554 599985 3 5655443
No 262
>PRK11200 grxA glutaredoxin 1; Provisional
Probab=39.14 E-value=59 Score=21.73 Aligned_cols=29 Identities=21% Similarity=0.260 Sum_probs=25.1
Q ss_pred CCCccEEEeCCEEeeccHHHHHHHHHHhC
Q psy13748 139 QHTVPTLEDGDLIVWDSHAINAYLVSAYG 167 (296)
Q Consensus 139 ~~~vP~L~~~g~~l~es~aI~~yl~~~~~ 167 (296)
..+||++..||..+.....|.+++.+.++
T Consensus 56 ~~~vP~ifi~g~~igg~~~~~~~~~~~~~ 84 (85)
T PRK11200 56 VETVPQIFVDQKHIGGCTDFEAYVKENLG 84 (85)
T ss_pred CCcCCEEEECCEEEcCHHHHHHHHHHhcc
Confidence 35899999999999999999999887664
No 263
>PTZ00051 thioredoxin; Provisional
Probab=37.92 E-value=1.3e+02 Score=20.37 Aligned_cols=57 Identities=9% Similarity=0.082 Sum_probs=32.4
Q ss_pred cEEEecCCCchhHHHHHHHHHh---CCceeEEEecccccccchHHHHhhCCCccccEEe--eCCee
Q psy13748 3 LILHEIIASPPVRAVKLCLTEL---GLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLE--DGDLI 63 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~---gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~--~~~~~ 63 (296)
+..++.++|+.|+...-.+... ...+....++..+ .....+...-..+|+++ .+|..
T Consensus 22 li~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~vd~~~----~~~~~~~~~v~~~Pt~~~~~~g~~ 83 (98)
T PTZ00051 22 IVDFYAEWCGPCKRIAPFYEECSKEYTKMVFVKVDVDE----LSEVAEKENITSMPTFKVFKNGSV 83 (98)
T ss_pred EEEEECCCCHHHHHHhHHHHHHHHHcCCcEEEEEECcc----hHHHHHHCCCceeeEEEEEeCCeE
Confidence 4567788999999776555442 1123334444321 23445555557899885 45543
No 264
>cd03189 GST_C_GTT1_like GST_C family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endopl
Probab=37.42 E-value=36 Score=24.23 Aligned_cols=25 Identities=36% Similarity=0.408 Sum_probs=18.9
Q ss_pred CCCHHHHHHHhhhhhccccchhhhh
Q psy13748 86 PKDPKVRALVDQRLHFDSGVLFSAL 110 (296)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (296)
|.++.+|+++++|+.+..+.+.+..
T Consensus 2 ~~~~~~ra~~~~wl~~~~~~~~~~~ 26 (119)
T cd03189 2 PPDTAEYADYLYWLHFAEGSLMPPL 26 (119)
T ss_pred CCCHHHHHHHHHHHHHHhHhhhHHH
Confidence 4578888888888888877776543
No 265
>cd03179 GST_C_1 GST_C family, unknown subfamily 1; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=37.10 E-value=47 Score=22.85 Aligned_cols=24 Identities=8% Similarity=0.133 Sum_probs=14.3
Q ss_pred CcCCCcccchhHhHHHHHHHHHhh
Q psy13748 237 FITGDTYNIADFSIYTTASALVAL 260 (296)
Q Consensus 237 ~l~g~~~t~aD~~~~~~l~~~~~~ 260 (296)
.|.++.+..||.++++|+.....+
T Consensus 58 ~L~~~~~l~g~~~slaDi~~~~~~ 81 (105)
T cd03179 58 HLAGRDFLVGDALTIADIALAAYT 81 (105)
T ss_pred HHccCccccCCCCCHHHHHHHHHH
Confidence 454445666677777776655444
No 266
>COG3019 Predicted metal-binding protein [General function prediction only]
Probab=36.96 E-value=64 Score=24.34 Aligned_cols=70 Identities=13% Similarity=0.060 Sum_probs=45.9
Q ss_pred cEEEecCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHh-hC-C--CccccEEeeCCeeee---ecHHHHHHHH
Q psy13748 3 LILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLK-LN-P--QHTVPTLEDGDLIVW---DSHAINAYLV 75 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~-~~-p--~~~vP~l~~~~~~~~---es~~I~~yl~ 75 (296)
+..|..|+|+.|..-.-.|+.+|.....+..+-. ...++ ++ | ....-+.+.+|..+- -..+|.+.|+
T Consensus 28 ~~vyksPnCGCC~~w~~~mk~~Gf~Vk~~~~~d~------~alK~~~gIp~e~~SCHT~VI~Gy~vEGHVPa~aI~~ll~ 101 (149)
T COG3019 28 MVVYKSPNCGCCDEWAQHMKANGFEVKVVETDDF------LALKRRLGIPYEMQSCHTAVINGYYVEGHVPAEAIARLLA 101 (149)
T ss_pred EEEEeCCCCccHHHHHHHHHhCCcEEEEeecCcH------HHHHHhcCCChhhccccEEEEcCEEEeccCCHHHHHHHHh
Confidence 6889999999999888888888888776665421 11111 11 1 234556666665543 3467888888
Q ss_pred Hhc
Q psy13748 76 SAY 78 (296)
Q Consensus 76 ~~~ 78 (296)
++.
T Consensus 102 ~~p 104 (149)
T COG3019 102 EKP 104 (149)
T ss_pred CCC
Confidence 865
No 267
>cd02997 PDI_a_PDIR PDIa family, PDIR subfamily; composed of proteins similar to human PDIR (for Protein Disulfide Isomerase Related). PDIR is composed of three redox active TRX (a) domains and an N-terminal redox inactive TRX-like (b) domain. Similar to PDI, it is involved in oxidative protein folding in the endoplasmic reticulum (ER) through its isomerase and chaperone activities. These activities are lower compared to PDI, probably due to PDIR acting only on a subset of proteins. PDIR is preferentially expressed in cells actively secreting proteins and its expression is induced by stress. Similar to PDI, the isomerase and chaperone activities of PDIR are independent; CXXC mutants lacking isomerase activity retain chaperone activity.
Probab=34.99 E-value=88 Score=21.37 Aligned_cols=54 Identities=15% Similarity=0.068 Sum_probs=28.3
Q ss_pred cEEEecCCCchhHHHHHHH----HHhC--CceeEEEecccccccchHHHHhhCCCccccEEe
Q psy13748 3 LILHEIIASPPVRAVKLCL----TELG--LEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLE 58 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L----~~~g--i~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~ 58 (296)
+.+|+.++|+.|+...-.+ .... -.+....++... ...+.+.+...-..+|+++
T Consensus 21 ~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~id~~~--~~~~~~~~~~~i~~~Pt~~ 80 (104)
T cd02997 21 LVMFYAPWCGHCKKMKPEFTKAATELKEDGKGVLAAVDCTK--PEHDALKEEYNVKGFPTFK 80 (104)
T ss_pred EEEEECCCCHHHHHhCHHHHHHHHHHhhCCceEEEEEECCC--CccHHHHHhCCCccccEEE
Confidence 4577888999999663222 2211 223333444332 1134444444455789885
No 268
>TIGR02187 GlrX_arch Glutaredoxin-like domain protein. This family of archaeal proteins contains a C-terminal domain with homology to bacterial and eukaryotic glutaredoxins, including a CPYC motif. There is an N-terminal domain which has even more distant homology to glutaredoxins. The name "glutaredoxin" may be inappropriate in the sense of working in tandem with glutathione and glutathione reductase which may not be present in the archaea. The overall domain structure appears to be related to bacterial alkylhydroperoxide reductases, but the homology may be distant enough that the function of this family is wholly different.
Probab=33.67 E-value=1.8e+02 Score=23.49 Aligned_cols=56 Identities=16% Similarity=0.112 Sum_probs=33.0
Q ss_pred cEEEec---CCCchhHHHHHHHHHhC-----CceeEEEecccccccchHHHHhhCCCccccEEe--eCCe
Q psy13748 3 LILHEI---IASPPVRAVKLCLTELG-----LEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLE--DGDL 62 (296)
Q Consensus 3 ~~Ly~~---~~s~~~~~v~~~L~~~g-----i~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~--~~~~ 62 (296)
+.+|.. ++|+.|..+.-.+++.. +.+....++..+ .++..+..--..+|+++ .+|.
T Consensus 23 i~~f~~~~a~wC~~C~~~~p~l~~la~~~~~~~i~~v~vd~~~----~~~l~~~~~V~~~Pt~~~f~~g~ 88 (215)
T TIGR02187 23 IVVFTDNDKEGCQYCKETEQLLEELSEVSPKLKLEIYDFDTPE----DKEEAEKYGVERVPTTIILEEGK 88 (215)
T ss_pred EEEEcCCCCCCCCchHHHHHHHHHHHhhCCCceEEEEecCCcc----cHHHHHHcCCCccCEEEEEeCCe
Confidence 566777 78999997777665542 333334443212 34444555566889986 4543
No 269
>cd03025 DsbA_FrnE_like DsbA family, FrnE-like subfamily; composed of uncharacterized proteins containing a CXXC motif with similarity to DsbA and FrnE. FrnE is presumed to be a thiol oxidoreductase involved in polyketide biosynthesis, specifically in the production of the aromatic antibiotics frenolicin and nanaomycins.
Probab=32.23 E-value=78 Score=24.80 Aligned_cols=35 Identities=17% Similarity=0.046 Sum_probs=24.3
Q ss_pred CccEEEecCCCchhH----HHHHHHHHh--CCceeEEEecc
Q psy13748 1 MGLILHEIIASPPVR----AVKLCLTEL--GLEAEYKTCNL 35 (296)
Q Consensus 1 M~~~Ly~~~~s~~~~----~v~~~L~~~--gi~~~~~~i~~ 35 (296)
|.+.+|..+.||||. +++-+.+.. +++++.+...+
T Consensus 1 ~~i~~~~D~~cp~c~~~~~~l~~l~~~~~~~~~v~~~~~~L 41 (193)
T cd03025 1 LELYYFIDPLCGWCYGFEPLLEKLKEEYGGGIEVELHLGGL 41 (193)
T ss_pred CeEEEEECCCCchhhCchHHHHHHHHHhCCCceEEEEeccc
Confidence 457899999999998 444445554 67777665444
No 270
>cd02951 SoxW SoxW family; SoxW is a bacterial periplasmic TRX, containing a redox active CXXC motif, encoded by a genetic locus (sox operon) involved in thiosulfate oxidation. Sulfur bacteria oxidize sulfur compounds to provide reducing equivalents for carbon dioxide fixation during autotrophic growth and the respiratory electron transport chain. It is unclear what the role of SoxW is, since it has been found to be dispensable in the oxidation of thiosulfate to sulfate. SoxW is specifically kept in the reduced state by SoxV, which is essential in thiosulfate oxidation.
Probab=31.83 E-value=1.9e+02 Score=20.68 Aligned_cols=16 Identities=25% Similarity=0.330 Sum_probs=12.9
Q ss_pred cEEEecCCCchhHHHH
Q psy13748 3 LILHEIIASPPVRAVK 18 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~ 18 (296)
+..++.++|++|++..
T Consensus 18 lv~f~a~wC~~C~~~~ 33 (125)
T cd02951 18 LLLFSQPGCPYCDKLK 33 (125)
T ss_pred EEEEeCCCCHHHHHHH
Confidence 5677888999999765
No 271
>cd02956 ybbN ybbN protein family; ybbN is a hypothetical protein containing a redox-inactive TRX-like domain. Its gene has been sequenced from several gammaproteobacteria and actinobacteria.
Probab=31.50 E-value=1.4e+02 Score=20.15 Aligned_cols=57 Identities=16% Similarity=0.080 Sum_probs=33.0
Q ss_pred cEEEecCCCchhHHHHHHHHHhCC----ceeEEEecccccccchHHHHhhCCCccccEEe--eCCee
Q psy13748 3 LILHEIIASPPVRAVKLCLTELGL----EAEYKTCNLLAREQFSDEYLKLNPQHTVPTLE--DGDLI 63 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~gi----~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~--~~~~~ 63 (296)
+..++.++|+.|+...-.+...-- .+....++... .+.+.+.-.-..+|+++ .+|..
T Consensus 16 lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~----~~~l~~~~~i~~~Pt~~~~~~g~~ 78 (96)
T cd02956 16 VVDFWAPRSPPSKELLPLLERLAEEYQGQFVLAKVNCDA----QPQIAQQFGVQALPTVYLFAAGQP 78 (96)
T ss_pred EEEEECCCChHHHHHHHHHHHHHHHhCCcEEEEEEeccC----CHHHHHHcCCCCCCEEEEEeCCEE
Confidence 455677899999976555543222 24444555432 24444444556799986 56644
No 272
>cd03187 GST_C_Phi GST_C family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes a
Probab=31.34 E-value=76 Score=22.32 Aligned_cols=22 Identities=18% Similarity=0.102 Sum_probs=11.2
Q ss_pred CcCCCcccchhHhHHHHHHHHH
Q psy13748 237 FITGDTYNIADFSIYTTASALV 258 (296)
Q Consensus 237 ~l~g~~~t~aD~~~~~~l~~~~ 258 (296)
.|.+..+.+||.++++|+..+.
T Consensus 60 ~L~~~~~l~G~~~t~aDi~l~~ 81 (118)
T cd03187 60 RLSKSKYLAGDSFTLADLSHLP 81 (118)
T ss_pred HcccCcccCCCCccHHHHHHHH
Confidence 3444445555555555555443
No 273
>KOG2824|consensus
Probab=31.14 E-value=93 Score=26.40 Aligned_cols=59 Identities=12% Similarity=0.175 Sum_probs=42.8
Q ss_pred hhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCC----CccccEEeeCCeeeeecHHHHHH
Q psy13748 13 PVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNP----QHTVPTLEDGDLIVWDSHAINAY 73 (296)
Q Consensus 13 ~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p----~~~vP~l~~~~~~~~es~~I~~y 73 (296)
.|..||.+|+-.+|-|+.+.|.+... ...+...+.. ...+|.+..+|..|-....|++-
T Consensus 149 ~C~~VR~ilesf~V~v~ERDVSMd~~--fr~EL~~~lg~~~~~~~LPrVFV~GryIGgaeeV~~L 211 (281)
T KOG2824|consen 149 DCNAVRAILESFRVKVDERDVSMDSE--FREELQELLGEDEKAVSLPRVFVKGRYIGGAEEVVRL 211 (281)
T ss_pred HHHHHHHHHHhCceEEEEecccccHH--HHHHHHHHHhcccccCccCeEEEccEEeccHHHhhhh
Confidence 37799999999999999999998643 2334333322 34689777888888877766653
No 274
>cd03020 DsbA_DsbC_DsbG DsbA family, DsbC and DsbG subfamily; V-shaped homodimeric proteins containing a redox active CXXC motif imbedded in a TRX fold. They function as protein disulfide isomerases and chaperones in the bacterial periplasm to correct non-native disulfide bonds formed by DsbA and prevent aggregation of incorrectly folded proteins. DsbC and DsbG are kept in their reduced state by the cytoplasmic membrane protein DsbD, which utilizes the TRX/TRX reductase system in the cytosol as a source of reducing equivalents. DsbG differ from DsbC in that it has a more limited substrate specificity, and it may preferentially act later in the folding process to catalyze disulfide rearrangements in folded or partially folded proteins. Also included in the alignment is the predicted protein TrbB, whose gene was sequenced from the enterohemorrhagic E. coli type IV pilus gene cluster, which is required for efficient plasmid transfer.
Probab=30.91 E-value=67 Score=25.58 Aligned_cols=32 Identities=13% Similarity=0.069 Sum_probs=23.5
Q ss_pred cEEEecCCCchhHHHHHHHHH--hCCceeEEEec
Q psy13748 3 LILHEIIASPPVRAVKLCLTE--LGLEAEYKTCN 34 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~--~gi~~~~~~i~ 34 (296)
+.+|..+.||+|++..-.+.. .++.+....+.
T Consensus 81 i~~f~D~~Cp~C~~~~~~l~~~~~~v~v~~~~~p 114 (197)
T cd03020 81 VYVFTDPDCPYCRKLEKELKPNADGVTVRIFPVP 114 (197)
T ss_pred EEEEECCCCccHHHHHHHHhhccCceEEEEEEcC
Confidence 567889999999999888873 45555555544
No 275
>PF11823 DUF3343: Protein of unknown function (DUF3343); InterPro: IPR021778 This family of proteins are functionally uncharacterised. This protein is found in bacteria and archaea. Proteins in this family are typically between 78 to 102 amino acids in length.
Probab=30.76 E-value=82 Score=20.52 Aligned_cols=34 Identities=12% Similarity=0.075 Sum_probs=27.9
Q ss_pred CccEEEecCCCchhHHHHHHHHHhCCceeEEEec
Q psy13748 1 MGLILHEIIASPPVRAVKLCLTELGLEAEYKTCN 34 (296)
Q Consensus 1 M~~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~ 34 (296)
|..-+..++....+.++.-.|+..|++++.+++.
T Consensus 1 m~~~~i~F~st~~a~~~ek~lk~~gi~~~liP~P 34 (73)
T PF11823_consen 1 MKYYLITFPSTHDAMKAEKLLKKNGIPVRLIPTP 34 (73)
T ss_pred CceEEEEECCHHHHHHHHHHHHHCCCcEEEeCCC
Confidence 4555667777888999999999999999888765
No 276
>TIGR02681 phage_pRha phage regulatory protein, rha family. Members of this protein family are found in temperate phage and bacterial prophage regions. Members include the product of the rha gene of the lambdoid phage phi-80, a late operon gene. The presence of this gene interferes with infection of bacterial strains that lack integration host factor (IHF), which regulates the rha gene. It is suggested that pRha is a phage regulatory protein.
Probab=30.35 E-value=50 Score=23.72 Aligned_cols=26 Identities=15% Similarity=0.208 Sum_probs=20.7
Q ss_pred ccEE-eeCCeeeeecHHHHHHHHHhcC
Q psy13748 54 VPTL-EDGDLIVWDSHAINAYLVSAYG 79 (296)
Q Consensus 54 vP~l-~~~~~~~~es~~I~~yl~~~~~ 79 (296)
.|.+ ..+|.++++|..|+++...+|.
T Consensus 2 ~~~v~~~~~~~~ttS~~IAe~fgK~H~ 28 (108)
T TIGR02681 2 FPKVFTKRNQVVTDSLTMAQMFGKRHD 28 (108)
T ss_pred CceEEEECCEEEEeHHHHHHHHCcchH
Confidence 3555 4899999999999998777664
No 277
>cd03208 GST_C_Alpha GST_C family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Alpha subfamily is composed of vertebrate GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GS
Probab=30.16 E-value=60 Score=24.19 Aligned_cols=36 Identities=11% Similarity=0.115 Sum_probs=26.3
Q ss_pred HHHHHHHHcCCCCCcC--CCcccchhHhHHHHHHHHHhhC
Q psy13748 224 ALDFAEKFLQGRKFIT--GDTYNIADFSIYTTASALVALV 261 (296)
Q Consensus 224 ~l~~le~~L~~~~~l~--g~~~t~aD~~~~~~l~~~~~~~ 261 (296)
.+...-+.|+. .|. |..+.+||.++++|+..+..+.
T Consensus 43 ~~~~~l~~lE~--~L~~~~~~~l~G~~~T~ADi~l~~~l~ 80 (137)
T cd03208 43 AKNRYFPVFEK--VLKSHGQDFLVGNKLSRADIHLLEAIL 80 (137)
T ss_pred HHHHHHHHHHH--HHHhCCCCeeeCCCCCHHHHHHHHHHH
Confidence 44455555655 676 5679999999999998776663
No 278
>PF09413 DUF2007: Domain of unknown function (DUF2007); InterPro: IPR018551 This is a family of proteins with unknown function. ; PDB: 2HFV_A.
Probab=29.79 E-value=52 Score=20.89 Aligned_cols=32 Identities=22% Similarity=0.019 Sum_probs=20.4
Q ss_pred cEEEecCCCchhHHHHHHHHHhCCceeEEEec
Q psy13748 3 LILHEIIASPPVRAVKLCLTELGLEAEYKTCN 34 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~ 34 (296)
.++|......-+..++-+|+..||++....-.
T Consensus 1 ~~l~~~~~~~ea~~i~~~L~~~gI~~~v~~~~ 32 (67)
T PF09413_consen 1 KKLYTAGDPIEAELIKGLLEENGIPAFVKNEH 32 (67)
T ss_dssp EEEEEE--HHHHHHHHHHHHHTT--EE--S--
T ss_pred CEEEEcCCHHHHHHHHHHHHhCCCcEEEECCc
Confidence 36788877778999999999999998765433
No 279
>COG2761 FrnE Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=29.72 E-value=42 Score=27.63 Aligned_cols=58 Identities=19% Similarity=0.229 Sum_probs=33.6
Q ss_pred cEEEecCCCchhH----HHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEeeCCeeeeecHHHHHHHHHhc
Q psy13748 3 LILHEIIASPPVR----AVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDGDLIVWDSHAINAYLVSAY 78 (296)
Q Consensus 3 ~~Ly~~~~s~~~~----~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~~es~~I~~yl~~~~ 78 (296)
|.+|....||||. +..-++...+-.+. +.+. -.|.-..|.+..+ ...+-.||..+|
T Consensus 8 I~v~sD~vCPwC~ig~~rL~ka~~~~~~~~~-v~i~-------------w~pf~l~p~~~~~------g~~~~~~l~~k~ 67 (225)
T COG2761 8 IDVFSDVVCPWCYIGKRRLEKALAEYPQEVR-VEIR-------------WRPFELDPDLPPE------GLDRKEYLAQKY 67 (225)
T ss_pred EEEEeCCcCchhhcCHHHHHHHHHhcCccee-EEEE-------------ecccccCCCCCcc------cccHHHHHHHHh
Confidence 7788899999998 44444444443332 2221 1233344444433 345667888888
Q ss_pred CC
Q psy13748 79 GK 80 (296)
Q Consensus 79 ~~ 80 (296)
+.
T Consensus 68 g~ 69 (225)
T COG2761 68 GI 69 (225)
T ss_pred Cc
Confidence 75
No 280
>cd02948 TRX_NDPK TRX domain, TRX and NDP-kinase (NDPK) fusion protein family; most members of this group are fusion proteins which contain one redox active TRX domain containing a CXXC motif and three NDPK domains, and are characterized as intermediate chains (ICs) of axonemal outer arm dynein. Dyneins are molecular motors that generate force against microtubules to produce cellular movement, and are divided into two classes: axonemal and cytoplasmic. They are supramolecular complexes consisting of three protein groups classified according to size: dynein heavy, intermediate and light chains. Axonemal dyneins form two structures, the inner and outer arms, which are attached to doublet microtubules throughout the cilia and flagella. The human homolog is the sperm-specific Sptrx-2, presumed to be a component of the human sperm axoneme architecture. Included in this group is another human protein, TRX-like protein 2, a smaller fusion protein containing one TRX and one NDPK domain, which
Probab=29.55 E-value=1.2e+02 Score=21.03 Aligned_cols=57 Identities=18% Similarity=0.107 Sum_probs=30.2
Q ss_pred cEEEecCCCchhHHHHHHHHHh----C-CceeEEEecccccccchHHHHhhCCCccccEEe--eCCeee
Q psy13748 3 LILHEIIASPPVRAVKLCLTEL----G-LEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLE--DGDLIV 64 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~----g-i~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~--~~~~~~ 64 (296)
+..|+.++|+.|+...-.+... + -......++.. .++..+..--..+|+++ .+|..+
T Consensus 21 vv~F~a~wC~~Ck~~~p~l~~~~~~~~~~~~~~~~vd~d-----~~~~~~~~~v~~~Pt~~~~~~g~~~ 84 (102)
T cd02948 21 VVDVYQEWCGPCKAVVSLFKKIKNELGDDLLHFATAEAD-----TIDTLKRYRGKCEPTFLFYKNGELV 84 (102)
T ss_pred EEEEECCcCHhHHHHhHHHHHHHHHcCCCcEEEEEEeCC-----CHHHHHHcCCCcCcEEEEEECCEEE
Confidence 4566788999999665444322 1 11223333322 23334444456789875 566543
No 281
>cd02972 DsbA_family DsbA family; consists of DsbA and DsbA-like proteins, including DsbC, DsbG, glutathione (GSH) S-transferase kappa (GSTK), 2-hydroxychromene-2-carboxylate (HCCA) isomerase, an oxidoreductase (FrnE) presumed to be involved in frenolicin biosynthesis, a 27-kDa outer membrane protein, and similar proteins. Members of this family contain a redox active CXXC motif (except GSTK and HCCA isomerase) imbedded in a TRX fold, and an alpha helical insert of about 75 residues (shorter in DsbC and DsbG) relative to TRX. DsbA is involved in the oxidative protein folding pathway in prokaryotes, catalyzing disulfide bond formation of proteins secreted into the bacterial periplasm. DsbC and DsbG function as protein disulfide isomerases and chaperones to correct non-native disulfide bonds formed by DsbA and prevent aggregation of incorrectly folded proteins.
Probab=29.00 E-value=80 Score=20.91 Aligned_cols=33 Identities=18% Similarity=0.185 Sum_probs=22.9
Q ss_pred cEEEecCCCchhHHHHHHHHHh------CCceeEEEecc
Q psy13748 3 LILHEIIASPPVRAVKLCLTEL------GLEAEYKTCNL 35 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~------gi~~~~~~i~~ 35 (296)
+.+|..+.||+|....-.+... ++.+..+.+.+
T Consensus 1 i~~f~d~~Cp~C~~~~~~l~~~~~~~~~~~~~~~~~~~~ 39 (98)
T cd02972 1 IVEFFDPLCPYCYLFEPELEKLLYADDGGVRVVYRPFPL 39 (98)
T ss_pred CeEEECCCCHhHHhhhHHHHHHHhhcCCcEEEEEecccc
Confidence 4688999999999777766653 44555555544
No 282
>KOG0911|consensus
Probab=28.23 E-value=1.8e+02 Score=23.90 Aligned_cols=64 Identities=11% Similarity=-0.008 Sum_probs=43.1
Q ss_pred ecCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEeeCCeeeeecHHHHH
Q psy13748 7 EIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDGDLIVWDSHAINA 72 (296)
Q Consensus 7 ~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~~es~~I~~ 72 (296)
..|-|++++.+.-.|...|++|+...|- ..+....-.++.+-=.+.|=|-.+|..+....-|..
T Consensus 150 ~~P~CGFS~~~v~iL~~~nV~~~~fdIL--~DeelRqglK~fSdWPTfPQlyI~GEFiGGlDIl~~ 213 (227)
T KOG0911|consen 150 EEPKCGFSRQLVGILQSHNVNYTIFDVL--TDEELRQGLKEFSDWPTFPQLYVKGEFIGGLDILKE 213 (227)
T ss_pred CcccccccHHHHHHHHHcCCCeeEEecc--CCHHHHHHhhhhcCCCCccceeECCEeccCcHHHHH
Confidence 3678999999999999999998876664 222222223334444567777788877776554443
No 283
>cd03022 DsbA_HCCA_Iso DsbA family, 2-hydroxychromene-2-carboxylate (HCCA) isomerase subfamily; HCCA isomerase is a glutathione (GSH) dependent enzyme involved in the naphthalene catabolic pathway. It converts HCCA, a hemiketal formed spontaneously after ring cleavage of 1,2-dihydroxynapthalene by a dioxygenase, into cis-o-hydroxybenzylidenepyruvate (cHBPA). This is the fourth reaction in a six-step pathway that converts napthalene into salicylate. HCCA isomerase is unique to bacteria that degrade polycyclic aromatic compounds. It is closely related to the eukaryotic protein, GSH transferase kappa (GSTK).
Probab=28.10 E-value=84 Score=24.55 Aligned_cols=33 Identities=15% Similarity=0.089 Sum_probs=23.7
Q ss_pred cEEEecCCCchhHH----HHHHHHHhCCceeEEEecc
Q psy13748 3 LILHEIIASPPVRA----VKLCLTELGLEAEYKTCNL 35 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~----v~~~L~~~gi~~~~~~i~~ 35 (296)
+.+|....||||.. ++-+....++.++.+++.+
T Consensus 1 i~~~~D~~cP~cy~~~~~l~~~~~~~~~~i~~~p~~l 37 (192)
T cd03022 1 IDFYFDFSSPYSYLAHERLPALAARHGATVRYRPILL 37 (192)
T ss_pred CeEEEeCCChHHHHHHHHHHHHHHHhCCeeEEeeeeH
Confidence 46899999999984 3445556677777777654
No 284
>cd03021 DsbA_GSTK DsbA family, Glutathione (GSH) S-transferase Kappa (GSTK) subfamily; GSTK is a member of the GST family of enzymes which catalyzes the transfer of the thiol of GSH to electrophilic substrates. It is specifically located in the mitochondria and peroxisomes, unlike other members of the canonical GST family, which are mainly cytosolic. The biological substrates of GSTK are not yet known. It is presumed to have a protective role during respiration when large amounts of reactive oxygen species are generated. GSTK has the same general fold as DsbA, consisting of a thioredoxin domain interrupted by an alpha-helical domain and its biological unit is a homodimer. GSTK is closely related to the bacterial enzyme, 2-hydroxychromene-2-carboxylate (HCCA) isomerase. It shows little sequence similarity to the other members of the GST family.
Probab=26.79 E-value=99 Score=24.88 Aligned_cols=33 Identities=18% Similarity=0.092 Sum_probs=25.4
Q ss_pred cEEEecCCCchhHH----HHHHHHHhCCceeEEEecc
Q psy13748 3 LILHEIIASPPVRA----VKLCLTELGLEAEYKTCNL 35 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~----v~~~L~~~gi~~~~~~i~~ 35 (296)
+.+|+...||||.. +.-++...+++++.+++.+
T Consensus 3 Id~~~D~vcPwcylg~~~l~~~~~~~~v~i~~~P~~L 39 (209)
T cd03021 3 IELYYDVVSPYSYLAFEVLCRYQTAWNVDITYVPVFL 39 (209)
T ss_pred eEEEEeCCChHHHHHHHHHHHHHHHhCCeEEEEeeeh
Confidence 67899999999984 4555667788888777765
No 285
>cd02957 Phd_like Phosducin (Phd)-like family; composed of Phd and Phd-like proteins (PhLP), characterized as cytosolic regulators of G protein functions. Phd and PhLPs specifically bind G protein betagamma (Gbg)-subunits with high affinity, resulting in the solubilization of Gbg from the plasma membrane and impeding G protein-mediated signal transduction by inhibiting the formation of a functional G protein trimer (G protein alphabetagamma). Phd also inhibits the GTPase activity of G protein alpha. Phd can be phosphorylated by protein kinase A and G protein-coupled receptor kinase 2, leading to its inactivation. Phd was originally isolated from the retina, where it is highly expressed and has been implicated to play an important role in light adaptation. It is also found in the pineal gland, liver, spleen, striated muscle and the brain. The C-terminal domain of Phd adopts a thioredoxin fold, but it does not contain a CXXC motif. Phd interacts with G protein beta mostly through the N-te
Probab=26.59 E-value=1.5e+02 Score=20.91 Aligned_cols=59 Identities=14% Similarity=0.142 Sum_probs=32.2
Q ss_pred cEEEecCCCchhHHHHHHHHHhCCc---eeEEEecccccccchHHHHhhCCCccccEEe--eCCeeeee
Q psy13748 3 LILHEIIASPPVRAVKLCLTELGLE---AEYKTCNLLAREQFSDEYLKLNPQHTVPTLE--DGDLIVWD 66 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~gi~---~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~--~~~~~~~e 66 (296)
+..++.++|+.|+.+.-.++..--. .....++..+ . ...+..--..+|+++ .+|..+..
T Consensus 28 vv~F~a~~c~~C~~l~~~l~~la~~~~~v~f~~vd~~~----~-~l~~~~~i~~~Pt~~~f~~G~~v~~ 91 (113)
T cd02957 28 VVHFYEPGFPRCKILDSHLEELAAKYPETKFVKINAEK----A-FLVNYLDIKVLPTLLVYKNGELIDN 91 (113)
T ss_pred EEEEeCCCCCcHHHHHHHHHHHHHHCCCcEEEEEEchh----h-HHHHhcCCCcCCEEEEEECCEEEEE
Confidence 4567788999999766555432211 2223444321 1 333333445889986 56665543
No 286
>PRK11657 dsbG disulfide isomerase/thiol-disulfide oxidase; Provisional
Probab=26.52 E-value=94 Score=26.05 Aligned_cols=31 Identities=6% Similarity=-0.046 Sum_probs=20.6
Q ss_pred cEEEecCCCchhHHHHHHHHH---hC-CceeEEEe
Q psy13748 3 LILHEIIASPPVRAVKLCLTE---LG-LEAEYKTC 33 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~---~g-i~~~~~~i 33 (296)
+..|..+.||||++..--+.. .| |.+.+.++
T Consensus 121 I~vFtDp~CpyC~kl~~~l~~~~~~g~V~v~~ip~ 155 (251)
T PRK11657 121 VYVFADPNCPYCKQFWQQARPWVDSGKVQLRHILV 155 (251)
T ss_pred EEEEECCCChhHHHHHHHHHHHhhcCceEEEEEec
Confidence 567889999999998666542 23 55544433
No 287
>cd02952 TRP14_like Human TRX-related protein 14 (TRP14)-like family; composed of proteins similar to TRP14, a 14kD cytosolic protein that shows disulfide reductase activity in vitro with a different substrate specificity compared with another human cytosolic protein, TRX1. TRP14 catalyzes the reduction of small disulfide-containing peptides but does not reduce disulfides of ribonucleotide reductase, peroxiredoxin and methionine sulfoxide reductase, which are TRX1 substrates. TRP14 also plays a role in tumor necrosis factor (TNF)-alpha signaling pathways, distinct from that of TRX1. Its depletion promoted TNF-alpha induced activation of c-Jun N-terminal kinase and mitogen-activated protein kinases.
Probab=26.29 E-value=2.6e+02 Score=20.38 Aligned_cols=58 Identities=14% Similarity=0.118 Sum_probs=28.8
Q ss_pred CCCchhHHHHH----HHHHhCCceeEEEecccccc---cchHHHHhhCCC-ccccEEe--eCCeeeee
Q psy13748 9 IASPPVRAVKL----CLTELGLEAEYKTCNLLARE---QFSDEYLKLNPQ-HTVPTLE--DGDLIVWD 66 (296)
Q Consensus 9 ~~s~~~~~v~~----~L~~~gi~~~~~~i~~~~~~---~~~~~~~~~~p~-~~vP~l~--~~~~~~~e 66 (296)
++||.|+.+.- +.....-.+....|+..... .....+.+..-- ..+|+++ .++..+.+
T Consensus 38 ~WC~pCr~~~P~l~~l~~~~~~~v~fv~Vdvd~~~~w~d~~~~~~~~~~I~~~iPT~~~~~~~~~l~~ 105 (119)
T cd02952 38 SWCPDCVKAEPVVREALKAAPEDCVFIYCDVGDRPYWRDPNNPFRTDPKLTTGVPTLLRWKTPQRLVE 105 (119)
T ss_pred CCCHhHHhhchhHHHHHHHCCCCCEEEEEEcCCcccccCcchhhHhccCcccCCCEEEEEcCCceecc
Confidence 68999995543 33333322445556653211 112344332222 3799986 45544444
No 288
>PF04134 DUF393: Protein of unknown function, DUF393; InterPro: IPR007263 The DCC family, named after the conserved N-terminal DxxCxxC motif, encompasses COG3011 from COG. Proteins in this family are predicted to have a thioredoxin-like fold which, together with the presence of an invariant catalytic cysteine residue, suggests that they are a novel group of thiol-disulphide oxidoreductases []. As some of the bacterial proteins are encoded near penicillin-binding proteins, it has been suggested that these may be involved in redox regulation of cell wall biosynthesis [].
Probab=26.20 E-value=2.2e+02 Score=20.04 Aligned_cols=71 Identities=11% Similarity=0.040 Sum_probs=39.8
Q ss_pred EEecCCCchhHHHHHHHHHhCCceeEEEecccccccch-HHHHhhCC---CccccEEeeCCe-eeeecHHHHHHHHH
Q psy13748 5 LHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFS-DEYLKLNP---QHTVPTLEDGDL-IVWDSHAINAYLVS 76 (296)
Q Consensus 5 Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~-~~~~~~~p---~~~vP~l~~~~~-~~~es~~I~~yl~~ 76 (296)
|++...||.|....-.+...+-.-....++........ .....+++ ...+-+ ..+|. ....+.|+..-+..
T Consensus 1 v~YDg~C~lC~~~~~~l~~~d~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~g~~~~~G~~A~~~l~~~ 76 (114)
T PF04134_consen 1 VFYDGDCPLCRREVRFLRRRDRGGRLRFVDIQSEPDQALLASYGISPEDADSRLHL-IDDGERVYRGSDAVLRLLRR 76 (114)
T ss_pred CEECCCCHhHHHHHHHHHhcCCCCCEEEEECCChhhhhHHHhcCcCHHHHcCeeEE-ecCCCEEEEcHHHHHHHHHH
Confidence 46778999999888888877753344444442111100 01112221 223333 55554 89999998877554
No 289
>cd03209 GST_C_Mu GST_C family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the m
Probab=25.99 E-value=78 Score=22.71 Aligned_cols=43 Identities=19% Similarity=0.088 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCcCCCcccchhHhHHHHHHHHHhh
Q psy13748 216 EDKLRAREALDFAEKFLQGRKFITGDTYNIADFSIYTTASALVAL 260 (296)
Q Consensus 216 ~~~~~~~~~l~~le~~L~~~~~l~g~~~t~aD~~~~~~l~~~~~~ 260 (296)
...+.....+...-..|++ .|.++.+..||..+++|+..+..+
T Consensus 31 ~~~~~~~~~~~~~l~~le~--~L~~~~~l~G~~~T~aDi~l~~~~ 73 (121)
T cd03209 31 KLKPDYLAKLPDKLKLFSD--FLGDRPWFAGDKITYVDFLLYEAL 73 (121)
T ss_pred HHHHHHHHHHHHHHHHHHH--HhCCCCCcCCCCccHHHHHHHHHH
Confidence 3344444444444455554 777778999999999999876554
No 290
>COG5494 Predicted thioredoxin/glutaredoxin [Posttranslational modification, protein turnover, chaperones]
Probab=25.61 E-value=1.8e+02 Score=23.78 Aligned_cols=58 Identities=14% Similarity=0.091 Sum_probs=40.1
Q ss_pred CccEEEecCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhh-CCCccccEEeeCCee
Q psy13748 1 MGLILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKL-NPQHTVPTLEDGDLI 63 (296)
Q Consensus 1 M~~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~-~p~~~vP~l~~~~~~ 63 (296)
|++++|.+.+|..|-...-.|+.+|+-=.++.++... +-|... |---.||.+..||..
T Consensus 11 ~~VkI~~HktC~ssy~Lf~~L~nkgll~~Vkii~a~~-----p~f~~~~~~V~SvP~Vf~DGel 69 (265)
T COG5494 11 MEVKIFTHKTCVSSYMLFEYLENKGLLGKVKIIDAEL-----PPFLAFEKGVISVPSVFIDGEL 69 (265)
T ss_pred eEEEEEEecchHHHHHHHHHHHhcCCCCCceEEEcCC-----ChHHHhhcceeecceEEEcCeE
Confidence 6789999999999999999999999976666665422 233322 223368887655543
No 291
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases.
Probab=25.10 E-value=60 Score=25.87 Aligned_cols=20 Identities=35% Similarity=0.677 Sum_probs=18.5
Q ss_pred CCeeeeecHHHHHHHHHhcC
Q psy13748 60 GDLIVWDSHAINAYLVSAYG 79 (296)
Q Consensus 60 ~~~~~~es~~I~~yl~~~~~ 79 (296)
.+..|+||..|-+|+.++|+
T Consensus 154 ad~lIaDs~~I~~y~~~~y~ 173 (185)
T PF09314_consen 154 ADRLIADSKGIQDYIKERYG 173 (185)
T ss_pred CCEEEEcCHHHHHHHHHHcC
Confidence 46889999999999999998
No 292
>cd03190 GST_C_ECM4_like GST_C family, ECM4-like subfamily; composed of predominantly uncharacterized and taxonomically diverse proteins with similarity to the translation product of the Saccharomyces cerevisiae gene ECM4. ECM4, a gene of unknown function, is involved in cell surface biosynthesis and architecture. S. cerevisiae ECM4 mutants show increased amounts of the cell wall hexose, N-acetylglucosamine. More recently, global gene expression analysis shows that ECM4 is upregulated during genotoxic conditions and together with the expression profiles of 18 other genes could potentially differentiate between genotoxic and cytotoxic insults in yeast.
Probab=25.00 E-value=1.1e+02 Score=22.84 Aligned_cols=40 Identities=18% Similarity=0.173 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHcCC-CCCcCCCcccchhHhHHHHHHHHHhh
Q psy13748 221 AREALDFAEKFLQG-RKFITGDTYNIADFSIYTTASALVAL 260 (296)
Q Consensus 221 ~~~~l~~le~~L~~-~~~l~g~~~t~aD~~~~~~l~~~~~~ 260 (296)
.......+.+.|+. ...|.+..+..||..+++|+.....+
T Consensus 35 ~~~~~~~l~~~l~~LE~~L~~~~yl~Gd~~TlADi~l~~~l 75 (142)
T cd03190 35 YDEAVDELFEALDRLEELLSDRRYLLGDRLTEADIRLFTTL 75 (142)
T ss_pred HHHHHHHHHHHHHHHHHHHccCCeeeCCCccHHHHHHHHHH
Confidence 33444444444432 23677778999999999999877665
No 293
>cd03198 GST_C_CLIC GST_C family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin, and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division, and apoptosis. They can exist in both water-soluble and membrane-bound states and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and adopts a fold similar to GSTs, containing an N-terminal domain with a thioredoxin fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. T
Probab=24.43 E-value=78 Score=23.70 Aligned_cols=45 Identities=16% Similarity=0.055 Sum_probs=30.2
Q ss_pred cHHHHHHHHHHHHHHHHHcCCCCCcCC----------------CcccchhHhHHHHHHHHHhh
Q psy13748 214 PEEDKLRAREALDFAEKFLQGRKFITG----------------DTYNIADFSIYTTASALVAL 260 (296)
Q Consensus 214 ~~~~~~~~~~~l~~le~~L~~~~~l~g----------------~~~t~aD~~~~~~l~~~~~~ 260 (296)
.+...+.+...+...-+.|+. +|.+ ..+.+||.++++|+..+..+
T Consensus 23 ~~~~~e~~~~~l~~~L~~ld~--~L~~~~~~~~~~~~~~~~~~~~fL~Gd~fTlADi~l~p~L 83 (134)
T cd03198 23 NPALNENLEKGLLKALKKLDD--YLNSPLPDEIDSAEDEGVSQRKFLDGDELTLADCNLLPKL 83 (134)
T ss_pred ChhhhHHHHHHHHHHHHHHHH--HHccCccccccccccccccCCCCCCCCCCCHHHHHHHHHH
Confidence 334444455444444445555 8865 45899999999999988775
No 294
>PF00731 AIRC: AIR carboxylase; InterPro: IPR000031 Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. PurK, N5-carboxyaminoimidazole ribonucleotide (N5_CAIR) synthetase, catalyzes the conversion of 5-aminoimidazole ribonucleotide (AIR), ATP, and bicarbonate to N5-CAIR, ADP, and Pi. PurE converts N5-CAIR to CAIR, the sixth step of de novo purine biosynthesis. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. Some members of this family contain two copies of this domain []. The crystal structure of PurE indicates a unique quaternary structure that confirms the octameric nature of the enzyme [].; GO: 0004638 phosphoribosylaminoimidazole carboxylase activity, 0006189 'de novo' IMP biosynthetic process; PDB: 3TRH_O 2YWX_A 2NSL_A 1D7A_A 2NSJ_A 1QCZ_A 2ATE_A 2NSH_A 3RG8_C 3RGG_D ....
Probab=23.45 E-value=1.7e+02 Score=22.43 Aligned_cols=38 Identities=18% Similarity=0.218 Sum_probs=24.6
Q ss_pred CCchhHHHHHHHHHhCCceeEEEecccccccchHHHHh
Q psy13748 10 ASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLK 47 (296)
Q Consensus 10 ~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~ 47 (296)
.-+.+++++-.|++.|++|+.+.+..-+..+.-.+|.+
T Consensus 12 D~~~~~~a~~~L~~~gi~~~~~V~saHR~p~~l~~~~~ 49 (150)
T PF00731_consen 12 DLPIAEEAAKTLEEFGIPYEVRVASAHRTPERLLEFVK 49 (150)
T ss_dssp GHHHHHHHHHHHHHTT-EEEEEE--TTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEEeccCCHHHHHHHHH
Confidence 34678899999999999999988876543222334443
No 295
>KOG4023|consensus
Probab=23.41 E-value=1.1e+02 Score=21.53 Aligned_cols=35 Identities=9% Similarity=-0.115 Sum_probs=25.9
Q ss_pred ccEEEecCCCchhH------HHHHHHHHhCCceeEEEeccc
Q psy13748 2 GLILHEIIASPPVR------AVKLCLTELGLEAEYKTCNLL 36 (296)
Q Consensus 2 ~~~Ly~~~~s~~~~------~v~~~L~~~gi~~~~~~i~~~ 36 (296)
.++.|.-..++... .+..+|....|+|+.+.+...
T Consensus 3 ~irvyvasssg~~eik~kqqevv~~Ld~~ki~fk~~di~~~ 43 (108)
T KOG4023|consen 3 VIRVYVASSSGSTEIKKKQQEVVRFLDANKIGFKEIDITAY 43 (108)
T ss_pred ceEEEEecCCCchHHHhhhhhhhhhhhcccCCcceeeccch
Confidence 38888777666543 577888888999988777653
No 296
>cd03024 DsbA_FrnE DsbA family, FrnE subfamily; FrnE is a DsbA-like protein containing a CXXC motif. It is presumed to be a thiol oxidoreductase involved in polyketide biosynthesis, specifically in the production of the aromatic antibiotics frenolicin and nanaomycins.
Probab=23.01 E-value=1.1e+02 Score=24.05 Aligned_cols=33 Identities=21% Similarity=0.343 Sum_probs=22.7
Q ss_pred cEEEecCCCchhH----HHHHHHHHh----CCceeEEEecc
Q psy13748 3 LILHEIIASPPVR----AVKLCLTEL----GLEAEYKTCNL 35 (296)
Q Consensus 3 ~~Ly~~~~s~~~~----~v~~~L~~~----gi~~~~~~i~~ 35 (296)
+.+|....||||. +++-+++.. ++.++.+++.+
T Consensus 1 I~~~~D~~cP~cyl~~~~l~~~~~~~~~~~~~~v~~~p~~L 41 (201)
T cd03024 1 IDIWSDVVCPWCYIGKRRLEKALAELGDEVDVEIEWRPFEL 41 (201)
T ss_pred CeEEecCcCccHHHHHHHHHHHHHhCCCCCceEEEEeeeee
Confidence 5689999999998 444444555 56666666654
No 297
>PRK10877 protein disulfide isomerase II DsbC; Provisional
Probab=22.73 E-value=1.3e+02 Score=24.82 Aligned_cols=22 Identities=5% Similarity=0.048 Sum_probs=18.0
Q ss_pred cEEEecCCCchhHHHHHHHHHh
Q psy13748 3 LILHEIIASPPVRAVKLCLTEL 24 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~ 24 (296)
+++|..+.||||++..--+...
T Consensus 111 I~vFtDp~CpyCkkl~~~l~~~ 132 (232)
T PRK10877 111 ITVFTDITCGYCHKLHEQMKDY 132 (232)
T ss_pred EEEEECCCChHHHHHHHHHHHH
Confidence 6788999999999987777653
No 298
>cd02987 Phd_like_Phd Phosducin (Phd)-like family, Phd subfamily; Phd is a cytosolic regulator of G protein functions. It specifically binds G protein betagamma (Gbg)-subunits with high affinity, resulting in the solubilization of Gbg from the plasma membrane. This impedes the formation of a functional G protein trimer (G protein alphabetagamma), thereby inhibiting G protein-mediated signal transduction. Phd also inhibits the GTPase activity of G protein alpha. Phd can be phosphorylated by protein kinase A and G protein-coupled receptor kinase 2, leading to its inactivation. Phd was originally isolated from the retina, where it is highly expressed and has been implicated to play an important role in light adaptation. It is also found in the pineal gland, liver, spleen, striated muscle and the brain. The C-terminal domain of Phd adopts a thioredoxin fold, but it does not contain a CXXC motif. Phd interacts with G protein beta mostly through the N-terminal helical domain.
Probab=22.23 E-value=3e+02 Score=21.56 Aligned_cols=59 Identities=12% Similarity=0.050 Sum_probs=31.9
Q ss_pred cEEEecCCCchhHHHHHHH---HHhCCceeEEEecccccccchHHHHhhCCCccccEEe--eCCeeeee
Q psy13748 3 LILHEIIASPPVRAVKLCL---TELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLE--DGDLIVWD 66 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L---~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~--~~~~~~~e 66 (296)
+..++.++|+.|..+--.| +..--.+....|+... . ......+-..+|+|+ .+|..+..
T Consensus 87 VV~Fya~wc~~Ck~m~~~l~~LA~~~~~vkF~kVd~d~----~-~l~~~f~v~~vPTlllyk~G~~v~~ 150 (175)
T cd02987 87 VVHIYEPGIPGCAALNSSLLCLAAEYPAVKFCKIRASA----T-GASDEFDTDALPALLVYKGGELIGN 150 (175)
T ss_pred EEEEECCCCchHHHHHHHHHHHHHHCCCeEEEEEeccc----h-hhHHhCCCCCCCEEEEEECCEEEEE
Confidence 3456678899998554333 2221123344444321 1 333445667899986 57765543
No 299
>KOG3425|consensus
Probab=21.50 E-value=2.6e+02 Score=20.60 Aligned_cols=68 Identities=18% Similarity=0.126 Sum_probs=38.5
Q ss_pred cCCCchhHH----HHHHHHHhCCceeEEEeccccc-ccchH--HHHhhCCC--ccccEEe--e-CCeeeeecHHHHHHHH
Q psy13748 8 IIASPPVRA----VKLCLTELGLEAEYKTCNLLAR-EQFSD--EYLKLNPQ--HTVPTLE--D-GDLIVWDSHAINAYLV 75 (296)
Q Consensus 8 ~~~s~~~~~----v~~~L~~~gi~~~~~~i~~~~~-~~~~~--~~~~~~p~--~~vP~l~--~-~~~~~~es~~I~~yl~ 75 (296)
-++||.|.+ |+=+|++.+-....+.++..+. .++++ .|. .+|. ..||+|. . ....+.+...-..+|.
T Consensus 42 qSWCPdCV~AEPvi~~alk~ap~~~~~v~v~VG~rp~Wk~p~n~FR-~d~~~lt~vPTLlrw~~~~~rL~~~q~~~~~Lv 120 (128)
T KOG3425|consen 42 QSWCPDCVAAEPVINEALKHAPEDVHFVHVYVGNRPYWKDPANPFR-KDPGILTAVPTLLRWKRQPQRLDGLQCLNDHLV 120 (128)
T ss_pred CcCCchHHHhhHHHHHHHHhCCCceEEEEEEecCCCcccCCCCccc-cCCCceeecceeeEEcCccccchHhHhhHHHHH
Confidence 357999885 4556666666666666666432 11111 122 2222 4689996 3 3456666666666665
Q ss_pred H
Q psy13748 76 S 76 (296)
Q Consensus 76 ~ 76 (296)
+
T Consensus 121 e 121 (128)
T KOG3425|consen 121 E 121 (128)
T ss_pred H
Confidence 4
No 300
>PHA03075 glutaredoxin-like protein; Provisional
Probab=20.89 E-value=1.7e+02 Score=21.41 Aligned_cols=63 Identities=19% Similarity=0.134 Sum_probs=44.0
Q ss_pred cEEEecCCCchhHHHHHHHHHhCCceeEEEecccccccchHHHHhhCCCccccEEeeC-CeeeeecHHHHHHHHH
Q psy13748 3 LILHEIIASPPVRAVKLCLTELGLEAEYKTCNLLAREQFSDEYLKLNPQHTVPTLEDG-DLIVWDSHAINAYLVS 76 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~-~~~~~es~~I~~yl~~ 76 (296)
+.|+|=|.|+-|+.+.-+|++.-=.|+...|+...- .+..|.+-+|-.| +..+. ..+..|+..
T Consensus 5 LILfGKP~C~vCe~~s~~l~~ledeY~ilrVNIlSf---------FsK~g~v~~lg~d~~y~lI--nn~~~~lgn 68 (123)
T PHA03075 5 LILFGKPLCSVCESISEALKELEDEYDILRVNILSF---------FSKDGQVKVLGMDKGYTLI--NNFFKHLGN 68 (123)
T ss_pred EEEeCCcccHHHHHHHHHHHHhhccccEEEEEeeee---------eccCCceEEEecccceehH--HHHHHhhcc
Confidence 789999999999999999999888999999987432 2335666666433 32221 345555543
No 301
>cd02962 TMX2 TMX2 family; composed of proteins similar to human TMX2, a 372-amino acid TRX-related transmembrane protein, identified and characterized through the cloning of its cDNA from a human fetal library. It contains a TRX domain but the redox active CXXC motif is replaced with SXXC. Sequence analysis predicts that TMX2 may be a Type I membrane protein, with its C-terminal half protruding on the luminal side of the endoplasmic reticulum (ER). In addition to the TRX domain, transmembrane region and ER-retention signal, TMX2 also contains a Myb DNA-binding domain repeat signature and a dileucine motif in the tail.
Probab=20.22 E-value=4e+02 Score=20.34 Aligned_cols=59 Identities=15% Similarity=0.133 Sum_probs=32.1
Q ss_pred cEEEecCCCchhHHHHHHHHHh-----CCceeEEEecccccccchHHHHh-hCCC-----ccccEEe--eCCeeee
Q psy13748 3 LILHEIIASPPVRAVKLCLTEL-----GLEAEYKTCNLLAREQFSDEYLK-LNPQ-----HTVPTLE--DGDLIVW 65 (296)
Q Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~-----gi~~~~~~i~~~~~~~~~~~~~~-~~p~-----~~vP~l~--~~~~~~~ 65 (296)
+..|+.++|+.|+...-.+... +-.+....||..+. ++..+ .+-. +.+|+++ .+|..+.
T Consensus 51 vV~Fya~wC~~Ck~l~p~l~~la~~~~~~~v~f~~VDvd~~----~~la~~~~V~~~~~v~~~PT~ilf~~Gk~v~ 122 (152)
T cd02962 51 LVEFFTTWSPECVNFAPVFAELSLKYNNNNLKFGKIDIGRF----PNVAEKFRVSTSPLSKQLPTIILFQGGKEVA 122 (152)
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHcccCCeEEEEEECCCC----HHHHHHcCceecCCcCCCCEEEEEECCEEEE
Confidence 4567788999998665444322 22344555665332 23332 2222 2489986 6665554
Done!