Query psy13751
Match_columns 149
No_of_seqs 190 out of 1293
Neff 8.3
Searched_HMMs 46136
Date Fri Aug 16 19:34:45 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13751.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/13751hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK15113 glutathione S-transfe 99.9 4.3E-22 9.3E-27 149.4 13.4 133 10-145 16-154 (214)
2 KOG0867|consensus 99.9 8.7E-22 1.9E-26 149.4 13.7 136 9-146 10-151 (226)
3 KOG0868|consensus 99.9 1.4E-21 3E-26 140.8 9.7 131 16-149 20-153 (217)
4 PRK13972 GSH-dependent disulfi 99.8 2.5E-20 5.5E-25 139.7 13.2 127 13-144 12-148 (215)
5 PLN02395 glutathione S-transfe 99.8 1.6E-20 3.4E-25 140.4 11.3 129 14-144 14-150 (215)
6 PRK09481 sspA stringent starva 99.8 2.2E-20 4.8E-25 139.8 10.6 121 14-144 23-143 (211)
7 PLN02473 glutathione S-transfe 99.8 4.2E-20 9.2E-25 138.1 11.9 130 13-144 14-151 (214)
8 PRK10542 glutathionine S-trans 99.8 4.5E-20 9.7E-25 136.5 11.2 125 15-144 13-140 (201)
9 COG0625 Gst Glutathione S-tran 99.8 6.3E-20 1.4E-24 137.1 11.4 127 13-144 12-147 (211)
10 KOG0406|consensus 99.8 6.7E-20 1.4E-24 138.1 9.9 123 15-145 23-146 (231)
11 TIGR01262 maiA maleylacetoacet 99.8 3.9E-19 8.5E-24 132.3 11.2 132 11-145 9-146 (210)
12 PRK11752 putative S-transferas 99.8 1.1E-18 2.3E-23 135.2 11.2 115 24-144 72-194 (264)
13 PRK10357 putative glutathione 99.8 5.4E-18 1.2E-22 125.6 10.3 131 9-145 8-142 (202)
14 cd03050 GST_N_Theta GST_N fami 99.7 3.8E-16 8.2E-21 99.0 8.0 68 10-78 9-76 (76)
15 cd03057 GST_N_Beta GST_N famil 99.7 4.3E-16 9.4E-21 98.9 7.9 66 13-79 11-77 (77)
16 PF02798 GST_N: Glutathione S- 99.7 3.8E-16 8.3E-21 99.4 7.3 64 12-76 11-76 (76)
17 cd03052 GST_N_GDAP1 GST_N fami 99.7 3.9E-16 8.4E-21 98.7 7.1 61 14-75 13-73 (73)
18 PLN02378 glutathione S-transfe 99.6 5.2E-15 1.1E-19 111.1 12.5 113 13-145 23-135 (213)
19 cd03046 GST_N_GTT1_like GST_N 99.6 1.3E-15 2.7E-20 96.2 7.7 65 14-79 12-76 (76)
20 cd03048 GST_N_Ure2p_like GST_N 99.6 1.4E-15 3.1E-20 97.4 8.0 66 13-79 12-80 (81)
21 cd03045 GST_N_Delta_Epsilon GS 99.6 2.3E-15 5E-20 94.6 7.3 63 13-76 12-74 (74)
22 cd03061 GST_N_CLIC GST_N famil 99.6 5.2E-15 1.1E-19 97.2 7.8 70 6-80 19-88 (91)
23 cd03047 GST_N_2 GST_N family, 99.6 3.9E-15 8.5E-20 93.6 7.0 63 12-75 11-73 (73)
24 TIGR00862 O-ClC intracellular 99.6 2.6E-14 5.7E-19 109.1 12.3 117 13-145 22-140 (236)
25 cd03053 GST_N_Phi GST_N family 99.6 7.7E-15 1.7E-19 92.7 7.5 67 10-77 10-76 (76)
26 PLN02817 glutathione dehydroge 99.6 2.5E-14 5.4E-19 111.0 11.6 81 13-100 76-156 (265)
27 cd03044 GST_N_EF1Bgamma GST_N 99.6 1.4E-14 3E-19 91.7 6.9 62 13-76 12-74 (75)
28 cd03075 GST_N_Mu GST_N family, 99.5 2.1E-14 4.5E-19 92.7 6.7 65 13-78 12-82 (82)
29 cd03056 GST_N_4 GST_N family, 99.5 2.8E-14 6E-19 89.2 7.1 62 13-75 12-73 (73)
30 PF13417 GST_N_3: Glutathione 99.5 4.8E-14 1E-18 89.3 8.0 64 13-80 10-73 (75)
31 cd03042 GST_N_Zeta GST_N famil 99.5 3.6E-14 7.8E-19 88.7 7.2 63 12-75 11-73 (73)
32 cd03043 GST_N_1 GST_N family, 99.5 5.1E-14 1.1E-18 88.8 7.2 64 10-75 10-73 (73)
33 PF13409 GST_N_2: Glutathione 99.5 6.5E-14 1.4E-18 87.6 7.1 63 14-77 6-70 (70)
34 cd03059 GST_N_SspA GST_N famil 99.5 6.5E-14 1.4E-18 87.6 7.1 62 13-78 12-73 (73)
35 PTZ00057 glutathione s-transfe 99.5 1.5E-13 3.2E-18 102.5 9.4 116 13-145 16-140 (205)
36 PRK10387 glutaredoxin 2; Provi 99.5 1.1E-13 2.4E-18 102.9 8.4 89 13-110 12-101 (210)
37 KOG1695|consensus 99.5 2E-13 4.4E-18 102.0 9.3 124 13-145 15-140 (206)
38 cd03076 GST_N_Pi GST_N family, 99.5 6.3E-14 1.4E-18 88.3 5.2 60 13-76 13-72 (73)
39 cd03058 GST_N_Tau GST_N family 99.5 2.2E-13 4.9E-18 85.7 7.6 64 11-78 10-74 (74)
40 cd03041 GST_N_2GST_N GST_N fam 99.5 7E-14 1.5E-18 89.0 5.3 63 13-78 13-77 (77)
41 TIGR02182 GRXB Glutaredoxin, G 99.5 5.2E-13 1.1E-17 99.9 10.8 91 10-109 8-99 (209)
42 cd03038 GST_N_etherase_LigE GS 99.5 1.3E-13 2.8E-18 89.0 6.4 65 13-79 19-84 (84)
43 cd03051 GST_N_GTT2_like GST_N 99.5 2.4E-13 5.2E-18 84.9 6.8 63 12-75 11-74 (74)
44 cd03039 GST_N_Sigma_like GST_N 99.4 2.7E-13 5.8E-18 84.9 4.9 61 13-76 12-72 (72)
45 cd03060 GST_N_Omega_like GST_N 99.4 1.6E-12 3.4E-17 81.3 6.6 57 14-74 13-70 (71)
46 cd03077 GST_N_Alpha GST_N fami 99.4 2.1E-12 4.5E-17 82.6 7.2 61 12-79 12-77 (79)
47 KOG4420|consensus 99.4 4.9E-13 1.1E-17 101.7 4.4 77 7-87 35-111 (325)
48 cd03049 GST_N_3 GST_N family, 99.3 4.4E-12 9.4E-17 79.5 6.0 59 13-75 12-73 (73)
49 cd03080 GST_N_Metaxin_like GST 99.3 9.2E-12 2E-16 78.7 6.4 56 13-79 20-75 (75)
50 cd03055 GST_N_Omega GST_N fami 99.2 9E-12 2E-16 81.4 4.7 59 13-75 30-89 (89)
51 cd03037 GST_N_GRX2 GST_N famil 99.2 6.1E-11 1.3E-15 73.9 6.0 60 12-76 11-71 (71)
52 cd00570 GST_N_family Glutathio 99.1 3.7E-10 8.1E-15 68.6 6.3 60 13-75 12-71 (71)
53 cd03054 GST_N_Metaxin GST_N fa 99.1 3.3E-10 7.2E-15 70.8 5.8 54 13-77 19-72 (72)
54 PLN02907 glutamate-tRNA ligase 99.1 5.4E-10 1.2E-14 97.0 9.0 76 11-104 12-88 (722)
55 cd03040 GST_N_mPGES2 GST_N fam 99.1 2.3E-10 5.1E-15 72.3 4.4 62 11-78 11-76 (77)
56 cd03079 GST_N_Metaxin2 GST_N f 98.9 2.4E-09 5.2E-14 67.7 5.4 53 15-77 22-74 (74)
57 KOG1422|consensus 98.3 4E-06 8.6E-11 62.4 8.5 57 20-80 31-87 (221)
58 cd03078 GST_N_Metaxin1_like GS 97.9 6.3E-05 1.4E-09 47.2 6.1 30 48-77 43-72 (73)
59 COG2999 GrxB Glutaredoxin 2 [P 97.6 0.00044 9.5E-09 50.6 7.8 82 16-106 15-97 (215)
60 TIGR02190 GlrX-dom Glutaredoxi 96.8 0.0029 6.3E-08 39.9 4.6 51 21-75 29-79 (79)
61 PRK10638 glutaredoxin 3; Provi 96.4 0.0078 1.7E-07 38.2 4.8 58 15-75 17-74 (83)
62 PF10568 Tom37: Outer mitochon 96.3 0.0052 1.1E-07 38.5 3.4 27 48-74 44-71 (72)
63 KOG4244|consensus 96.2 0.025 5.5E-07 43.9 6.9 55 46-103 86-140 (281)
64 TIGR02196 GlrX_YruB Glutaredox 96.0 0.02 4.3E-07 34.5 4.7 49 23-74 23-73 (74)
65 cd02976 NrdH NrdH-redoxin (Nrd 95.7 0.021 4.6E-07 34.3 4.0 40 23-65 23-62 (73)
66 cd03029 GRX_hybridPRX5 Glutare 95.6 0.037 8E-07 33.9 4.9 50 22-75 23-72 (72)
67 cd03189 GST_C_GTT1_like GST_C 95.2 0.018 3.9E-07 38.5 2.6 58 86-144 2-70 (119)
68 cd03196 GST_C_5 GST_C family, 95.1 0.028 6.1E-07 37.9 3.5 56 87-144 2-57 (115)
69 cd02066 GRX_family Glutaredoxi 95.0 0.078 1.7E-06 31.5 5.0 48 22-72 22-69 (72)
70 TIGR02200 GlrX_actino Glutared 94.3 0.052 1.1E-06 33.2 3.0 46 19-67 19-66 (77)
71 cd03027 GRX_DEP Glutaredoxin ( 94.3 0.05 1.1E-06 33.5 2.7 49 16-67 17-65 (73)
72 COG0435 ECM4 Predicted glutath 94.1 0.24 5.1E-06 39.0 6.6 88 51-144 127-221 (324)
73 cd03177 GST_C_Delta_Epsilon GS 93.8 0.038 8.2E-07 37.0 1.7 53 91-144 2-54 (118)
74 cd03188 GST_C_Beta GST_C famil 93.6 0.085 1.8E-06 34.6 3.1 54 91-145 2-60 (114)
75 KOG2903|consensus 93.6 0.28 6.1E-06 38.2 6.2 59 51-111 121-190 (319)
76 KOG3027|consensus 92.7 0.35 7.6E-06 36.5 5.4 85 14-106 34-118 (257)
77 cd03179 GST_C_1 GST_C family, 92.3 0.28 6E-06 31.7 4.1 53 91-144 2-59 (105)
78 cd03182 GST_C_GTT2_like GST_C 91.6 0.15 3.3E-06 33.7 2.3 56 88-144 1-65 (117)
79 TIGR02183 GRXA Glutaredoxin, G 91.2 0.36 7.8E-06 30.8 3.7 37 43-79 45-83 (86)
80 PF09635 MetRS-N: MetRS-N bind 91.2 0.13 2.8E-06 35.4 1.6 30 50-79 32-63 (122)
81 cd03180 GST_C_2 GST_C family, 90.8 0.2 4.4E-06 32.6 2.2 53 91-144 2-59 (110)
82 cd03178 GST_C_Ure2p_like GST_C 90.6 0.22 4.7E-06 32.7 2.3 53 91-144 1-56 (113)
83 PRK11200 grxA glutaredoxin 1; 90.3 0.64 1.4E-05 29.3 4.2 54 23-79 29-84 (85)
84 cd03191 GST_C_Zeta GST_C famil 90.2 0.19 4.1E-06 33.6 1.7 54 90-144 2-60 (121)
85 cd03185 GST_C_Tau GST_C family 89.7 0.22 4.8E-06 33.4 1.7 50 90-144 2-51 (126)
86 cd03186 GST_C_SspA GST_N famil 89.5 0.26 5.6E-06 32.2 1.9 50 90-144 2-51 (107)
87 KOG3029|consensus 89.5 0.83 1.8E-05 36.1 4.9 51 20-76 109-159 (370)
88 PRK10329 glutaredoxin-like pro 89.4 0.51 1.1E-05 29.9 3.2 45 16-64 17-61 (81)
89 PF11287 DUF3088: Protein of u 88.2 0.68 1.5E-05 31.4 3.2 30 51-80 66-109 (112)
90 cd03181 GST_C_EFB1gamma GST_C 88.1 0.27 5.8E-06 32.8 1.3 54 91-145 1-57 (123)
91 cd03418 GRX_GRXb_1_3_like Glut 87.5 1.4 3.1E-05 26.6 4.3 49 23-74 23-72 (75)
92 cd03195 GST_C_4 GST_C family, 86.4 1.1 2.3E-05 30.0 3.5 55 89-144 1-58 (114)
93 TIGR02181 GRX_bact Glutaredoxi 86.0 1.6 3.5E-05 26.9 3.9 51 23-76 22-72 (79)
94 cd03200 GST_C_JTV1 GST_C famil 85.8 0.63 1.4E-05 30.3 2.0 31 71-105 1-31 (96)
95 KOG3028|consensus 85.4 1.6 3.5E-05 34.8 4.4 62 48-110 44-107 (313)
96 cd03190 GST_C_ECM4_like GST_C 84.3 0.99 2.2E-05 31.4 2.6 51 90-144 3-53 (142)
97 cd03419 GRX_GRXh_1_2_like Glut 84.3 3.9 8.4E-05 25.0 5.1 53 23-76 23-76 (82)
98 COG0695 GrxC Glutaredoxin and 82.6 3 6.6E-05 26.2 4.1 43 23-67 24-67 (80)
99 cd03187 GST_C_Phi GST_C family 78.3 1.6 3.5E-05 28.6 1.9 53 91-144 2-61 (118)
100 PF00462 Glutaredoxin: Glutare 76.3 2.1 4.5E-05 24.9 1.7 42 20-64 19-60 (60)
101 cd03183 GST_C_Theta GST_C fami 75.6 1.2 2.6E-05 29.9 0.6 54 92-146 2-63 (126)
102 cd03206 GST_C_7 GST_C family, 74.2 0.93 2E-05 29.2 -0.2 48 96-144 2-49 (100)
103 TIGR02194 GlrX_NrdH Glutaredox 71.2 6.6 0.00014 23.7 3.2 41 17-61 16-56 (72)
104 cd03203 GST_C_Lambda GST_C fam 70.9 3.7 8.1E-05 27.5 2.2 14 88-101 1-14 (120)
105 TIGR02180 GRX_euk Glutaredoxin 69.2 22 0.00047 21.5 5.4 32 45-76 46-77 (84)
106 cd00299 GST_C_family Glutathio 68.9 6.1 0.00013 24.5 2.8 48 96-144 2-52 (100)
107 cd03028 GRX_PICOT_like Glutare 67.6 15 0.00033 23.3 4.5 49 23-74 36-84 (90)
108 TIGR00365 monothiol glutaredox 59.8 35 0.00075 22.1 5.1 48 23-73 40-87 (97)
109 cd03184 GST_C_Omega GST_C fami 57.4 14 0.00031 24.6 3.1 48 91-145 2-49 (124)
110 cd03207 GST_C_8 GST_C family, 43.1 8 0.00017 24.7 0.0 45 96-144 2-46 (103)
111 PF04564 U-box: U-box domain; 40.5 28 0.0006 21.3 2.2 46 53-100 15-69 (73)
112 PHA03050 glutaredoxin; Provisi 37.5 79 0.0017 20.9 4.2 30 43-72 59-88 (108)
113 PF06753 Bradykinin: Bradykini 32.9 16 0.00034 16.4 0.1 9 4-12 11-19 (19)
114 TIGR02681 phage_pRha phage reg 31.3 56 0.0012 21.9 2.7 26 54-79 2-28 (108)
115 PF09314 DUF1972: Domain of un 30.4 44 0.00095 24.7 2.2 26 61-86 155-181 (185)
116 TIGR01764 excise DNA binding d 26.1 1.1E+02 0.0024 16.0 3.4 25 51-75 24-48 (49)
117 cd03030 GRX_SH3BGR Glutaredoxi 26.0 1.9E+02 0.0041 18.6 4.9 54 13-70 20-77 (92)
118 PF08159 NUC153: NUC153 domain 24.9 1.1E+02 0.0024 15.6 2.5 13 41-53 18-30 (30)
119 TIGR02189 GlrX-like_plant Glut 24.9 2E+02 0.0043 18.5 6.3 57 14-72 23-80 (99)
120 PF12622 NpwBP: mRNA biogenesi 24.8 37 0.0008 19.4 0.8 11 47-57 10-20 (48)
121 PF10022 DUF2264: Uncharacteri 24.0 69 0.0015 26.2 2.5 88 55-146 99-190 (361)
122 cd03031 GRX_GRX_like Glutaredo 23.3 2.7E+02 0.0059 19.6 5.1 49 22-73 28-80 (147)
123 PF14497 GST_C_3: Glutathione 22.5 66 0.0014 20.3 1.7 50 89-145 3-52 (99)
124 PF14834 GST_C_4: Glutathione 21.0 1.1E+02 0.0023 21.0 2.5 54 88-142 1-57 (117)
125 PF12728 HTH_17: Helix-turn-he 20.4 1.7E+02 0.0036 16.0 3.5 28 50-77 23-50 (51)
126 cd03192 GST_C_Sigma_like GST_C 20.4 56 0.0012 20.6 1.1 52 91-144 2-55 (104)
No 1
>PRK15113 glutathione S-transferase; Provisional
Probab=99.89 E-value=4.3e-22 Score=149.36 Aligned_cols=133 Identities=17% Similarity=0.259 Sum_probs=104.7
Q ss_pred CchHHHHHHHHHHhcccccccEEEecCCCCCCChhHHhhCCCCCcCeEEeCCeeeecHHHHHHHHHHHhCCCCC---CCC
Q psy13751 10 NQDKEIAELKEEIRKKEMEISVLVTFAPGETLDTAFLKQNPRRSLPALVDGDLLICDSHAINAYLVSAYGKNDV---LYP 86 (149)
Q Consensus 10 ~~~~~~~~l~~~i~~~e~~~~~~v~l~~~~~~~~~~~~~nP~g~VP~L~d~g~~l~ES~aI~~YL~~~~~~~~~---L~p 86 (149)
|...+.+++.....|++|+. +.+++.+++++.++|+++||+|+||+|++||.+|+||.||++||+++|+. +. |+|
T Consensus 16 s~~~~rv~~~l~e~gi~~e~-~~v~~~~~~~~~~~~~~~nP~g~VP~L~~~~~~l~ES~aI~~YL~~~~~~-~~~~~l~p 93 (214)
T PRK15113 16 SPYVMSAFVALQEKGLPFEL-KTVDLDAGEHLQPTYQGYSLTRRVPTLQHDDFELSESSAIAEYLEERFAP-PAWERIYP 93 (214)
T ss_pred CchHHHHHHHHHHcCCCCeE-EEeCCCCccccCHHHHhcCCCCCCCEEEECCEEEecHHHHHHHHHHHcCC-CCccccCC
Confidence 44467778888889999999 99999888888999999999999999999999999999999999999985 34 999
Q ss_pred CCHHHHHHHHHHHhHHhcccccccccceeeceee-c--cCccchhchhhHHHHHHHHHHhHc
Q psy13751 87 KDSKDRALVDQRLYFDAGEIFPTIKQIAVSPCLL-V--RTHIQGVSTHGLKDCILTLARYFL 145 (149)
Q Consensus 87 ~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~l~~~l~~le~~~~ 145 (149)
.++.+++++++|+.|..+.+.+..... ....++ + .....+...+.+.+.+..+|+.+-
T Consensus 94 ~~~~~ra~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~ 154 (214)
T PRK15113 94 ADLQARARARQIQAWLRSDLMPLREER-PTDVVFAGAKKAPLSEAGKAAAEKLFAVAERLLA 154 (214)
T ss_pred CCHHHHHHHHHHHHHHHhhhHHHhccC-ccchhccCCCCCcccHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999987776543221 111111 1 122234455667788888887663
No 2
>KOG0867|consensus
Probab=99.88 E-value=8.7e-22 Score=149.38 Aligned_cols=136 Identities=32% Similarity=0.471 Sum_probs=115.7
Q ss_pred cCchHHHHHHHHHHhcccccccEEEecCCCCCCChhHHhhCCCCCcCeEEeCCeeeecHHHHHHHHHHHhC-CCCCCCCC
Q psy13751 9 DNQDKEIAELKEEIRKKEMEISVLVTFAPGETLDTAFLKQNPRRSLPALVDGDLLICDSHAINAYLVSAYG-KNDVLYPK 87 (149)
Q Consensus 9 ~~~~~~~~~l~~~i~~~e~~~~~~v~l~~~~~~~~~~~~~nP~g~VP~L~d~g~~l~ES~aI~~YL~~~~~-~~~~L~p~ 87 (149)
.|.+.+-+-+.....|++|++ +.|++..|+|++++|+++||.|+||+|+|+|..++||.||+.||+++|. .+..|+|.
T Consensus 10 ~s~~~r~vl~~~~~~~l~~e~-~~v~~~~ge~~~pefl~~nP~~kVP~l~d~~~~l~eS~AI~~Yl~~ky~~~~~~l~p~ 88 (226)
T KOG0867|consen 10 GSPPARAVLIAAKELGLEVEL-KPVDLVKGEQKSPEFLKLNPLGKVPALEDGGLTLWESHAILRYLAEKYGPLGGILLPK 88 (226)
T ss_pred CCcchHHHHHHHHHcCCceeE-EEeeccccccCCHHHHhcCcCCCCCeEecCCeEEeeHHHHHHHHHHHcCCCCcccCCc
Confidence 355566677788888999999 9999999999999999999999999999999999999999999999997 33449999
Q ss_pred CHHHHHHHHHHHhHHhcccccc--cccceeeceeecc---CccchhchhhHHHHHHHHHHhHcc
Q psy13751 88 DSKDRALVDQRLYFDAGEIFPT--IKQIAVSPCLLVR---THIQGVSTHGLKDCILTLARYFLL 146 (149)
Q Consensus 88 ~~~~~a~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~---~~~~~~~~~~l~~~l~~le~~~~~ 146 (149)
++.+|+.+++|+.|.++.+.+. ...+ +.+...+. ..........+.+++..+|+.|..
T Consensus 89 ~~~~ra~v~~~l~~~~~~l~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~ 151 (226)
T KOG0867|consen 89 DLKERAIVDQWLEFENGVLDPVTFERPI-LAPLLVGLPLNPTAVKELEAKLRKALDNLERFLKT 151 (226)
T ss_pred CHHHHHHHHHHHHhhhccccccccccee-eecceecccCcchhhHHHHHHHHHHHHHHHHHHcc
Confidence 9999999999999999999998 4566 67744433 334456688889999999988755
No 3
>KOG0868|consensus
Probab=99.86 E-value=1.4e-21 Score=140.77 Aligned_cols=131 Identities=23% Similarity=0.244 Sum_probs=108.8
Q ss_pred HHHHHHHhcccccccEEEecCCCC-CCChhHHhhCCCCCcCeEEeCCeeeecHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Q psy13751 16 AELKEEIRKKEMEISVLVTFAPGE-TLDTAFLKQNPRRSLPALVDGDLLICDSHAINAYLVSAYGKNDVLYPKDSKDRAL 94 (149)
Q Consensus 16 ~~l~~~i~~~e~~~~~~v~l~~~~-~~~~~~~~~nP~g~VP~L~d~g~~l~ES~aI~~YL~~~~~~~~~L~p~~~~~~a~ 94 (149)
+|++..+++++|+. ++|++.+++ +...+|.++||+++||+|++||.+|+||.||++||+++||. +.|+|.|+..||.
T Consensus 20 VRiALaLK~iDYey-~PvnLlk~~~q~~~ef~~iNPm~kVP~L~i~g~tl~eS~AII~YLeEt~P~-ppLLP~d~~KRA~ 97 (217)
T KOG0868|consen 20 VRIALALKGIDYEY-KPVNLLKEEDQSDSEFKEINPMEKVPTLVIDGLTLTESLAIIEYLEETYPD-PPLLPKDPHKRAK 97 (217)
T ss_pred HHHHHHHcCCCcce-eehhhhcchhhhhhHHhhcCchhhCCeEEECCEEeehHHHHHHHHHhcCCC-CCCCCcCHHHHHH
Confidence 68899999999999 999999975 44579999999999999999999999999999999999997 7899999999999
Q ss_pred HHHHHhHHhcccccccccceeeceeeccCc--cchhchhhHHHHHHHHHHhHcccCC
Q psy13751 95 VDQRLYFDAGEIFPTIKQIAVSPCLLVRTH--IQGVSTHGLKDCILTLARYFLLSSK 149 (149)
Q Consensus 95 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~l~~le~~~~~~~~ 149 (149)
+++......+.+.|..... +...+..... ...-....+.+....||+.+-.|++
T Consensus 98 ~r~i~~~i~sgIQPlQNl~-vl~~l~ek~~~~~~~W~q~~ItkGF~ALEklL~~~aG 153 (217)
T KOG0868|consen 98 ARAISLLIASGIQPLQNLS-VLKMLNEKEPGYGDQWAQHFITKGFTALEKLLKSHAG 153 (217)
T ss_pred HHHHHHHHHhCCCcchhhH-HHHHhcccccchhhHHHHHHHHHhHHHHHHHHHHccC
Confidence 9999999999999876544 3333322211 1233577788888889888766653
No 4
>PRK13972 GSH-dependent disulfide bond oxidoreductase; Provisional
Probab=99.85 E-value=2.5e-20 Score=139.69 Aligned_cols=127 Identities=21% Similarity=0.286 Sum_probs=97.2
Q ss_pred HHHHHHHHHHhcccccccEEEecCCCCCCChhHHhhCCCCCcCeEEe-----CC--eeeecHHHHHHHHHHHhCCCCCCC
Q psy13751 13 KEIAELKEEIRKKEMEISVLVTFAPGETLDTAFLKQNPRRSLPALVD-----GD--LLICDSHAINAYLVSAYGKNDVLY 85 (149)
Q Consensus 13 ~~~~~l~~~i~~~e~~~~~~v~l~~~~~~~~~~~~~nP~g~VP~L~d-----~g--~~l~ES~aI~~YL~~~~~~~~~L~ 85 (149)
.+.+++..+..|++|++ +.|++.++++++++|+++||.|+||+|++ || .+|+||.||++||+++|+. ++
T Consensus 12 ~~~v~~~L~e~gl~~e~-~~v~~~~~~~~~~~~~~iNP~gkVP~L~~~~~~d~g~~~~L~ES~AI~~YL~~~~~~---l~ 87 (215)
T PRK13972 12 GHKITLFLEEAELDYRL-IKVDLGKGGQFRPEFLRISPNNKIPAIVDHSPADGGEPLSLFESGAILLYLAEKTGL---FL 87 (215)
T ss_pred hHHHHHHHHHcCCCcEE-EEecCcccccCCHHHHhhCcCCCCCEEEeCCCCCCCCceeEEcHHHHHHHHHHhcCC---CC
Confidence 34567778888999999 99999888888999999999999999996 45 5799999999999999863 78
Q ss_pred CCCHHHHHHHHHHHhHHhcccccccccceeeceeecc---CccchhchhhHHHHHHHHHHhH
Q psy13751 86 PKDSKDRALVDQRLYFDAGEIFPTIKQIAVSPCLLVR---THIQGVSTHGLKDCILTLARYF 144 (149)
Q Consensus 86 p~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~l~~le~~~ 144 (149)
|.++.+|+++++|+.|..+.+.+.+... ........ +...+.....+.+.+..||+.+
T Consensus 88 p~~~~~ra~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L 148 (215)
T PRK13972 88 SHETRERAATLQWLFWQVGGLGPMLGQN-HHFNHAAPQTIPYAIERYQVETQRLYHVLNKRL 148 (215)
T ss_pred CCCHHHHHHHHHHHHHHhhccCcceeee-eeeeccCCCCCchHHHHHHHHHHHHHHHHHHHh
Confidence 8889999999999999998888765432 11100011 1112233455777788888765
No 5
>PLN02395 glutathione S-transferase
Probab=99.84 E-value=1.6e-20 Score=140.43 Aligned_cols=129 Identities=24% Similarity=0.287 Sum_probs=99.8
Q ss_pred HHHHHHHHHhcccccccEEEecCCCCCCChhHHhhCCCCCcCeEEeCCeeeecHHHHHHHHHHHhCCC-CCCCCCCHHHH
Q psy13751 14 EIAELKEEIRKKEMEISVLVTFAPGETLDTAFLKQNPRRSLPALVDGDLLICDSHAINAYLVSAYGKN-DVLYPKDSKDR 92 (149)
Q Consensus 14 ~~~~l~~~i~~~e~~~~~~v~l~~~~~~~~~~~~~nP~g~VP~L~d~g~~l~ES~aI~~YL~~~~~~~-~~L~p~~~~~~ 92 (149)
+-+++.+..+|++|+. +.|++..+++++++|+++||+|+||+|+++|.+|+||.||++||+++|+.. +.|+|.++.++
T Consensus 14 ~rv~~~L~e~gl~~e~-~~v~~~~~~~~~~~~~~~nP~g~vP~L~~~~~~l~ES~aI~~YL~~~~~~~~~~l~p~~~~~~ 92 (215)
T PLN02395 14 KRALVTLIEKGVEFET-VPVDLMKGEHKQPEYLALQPFGVVPVIVDGDYKIFESRAIMRYYAEKYRSQGPDLLGKTIEER 92 (215)
T ss_pred HHHHHHHHHcCCCceE-EEeccccCCcCCHHHHhhCCCCCCCEEEECCEEEEcHHHHHHHHHHHcCCCCcCcCCCChhHH
Confidence 4455666678999999 999998888889999999999999999999999999999999999999742 35999999999
Q ss_pred HHHHHHHhHHhcccccccccceeecee----eccCc---cchhchhhHHHHHHHHHHhH
Q psy13751 93 ALVDQRLYFDAGEIFPTIKQIAVSPCL----LVRTH---IQGVSTHGLKDCILTLARYF 144 (149)
Q Consensus 93 a~~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~~---~~~~~~~~l~~~l~~le~~~ 144 (149)
+++++|+.|..+.+.+.+... ..... .+... ..+...+.+.+.+..||+.+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L 150 (215)
T PLN02395 93 GQVEQWLDVEATSYHPPLLNL-TLHILFASKMGFPADEKVIKESEEKLAKVLDVYEARL 150 (215)
T ss_pred HHHHHHHHHHHHhcCchHHHH-HHHHHhhhhccCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999988887665433 21111 11111 11234556677788888775
No 6
>PRK09481 sspA stringent starvation protein A; Provisional
Probab=99.84 E-value=2.2e-20 Score=139.82 Aligned_cols=121 Identities=21% Similarity=0.271 Sum_probs=93.4
Q ss_pred HHHHHHHHHhcccccccEEEecCCCCCCChhHHhhCCCCCcCeEEeCCeeeecHHHHHHHHHHHhCCCCCCCCCCHHHHH
Q psy13751 14 EIAELKEEIRKKEMEISVLVTFAPGETLDTAFLKQNPRRSLPALVDGDLLICDSHAINAYLVSAYGKNDVLYPKDSKDRA 93 (149)
Q Consensus 14 ~~~~l~~~i~~~e~~~~~~v~l~~~~~~~~~~~~~nP~g~VP~L~d~g~~l~ES~aI~~YL~~~~~~~~~L~p~~~~~~a 93 (149)
..+++..+.+|++|++ +.|++ ++++++|+++||+|+||+|+++|.+|+||.||++||+++|+. ..|+|.++.+|+
T Consensus 23 ~rv~~~L~e~gl~~e~-~~v~~---~~~~~~~~~~nP~g~VPvL~~~g~~l~ES~AIl~YL~~~~~~-~~l~p~~~~~ra 97 (211)
T PRK09481 23 HQVRIVLAEKGVSVEI-EQVEK---DNLPQDLIDLNPYQSVPTLVDRELTLYESRIIMEYLDERFPH-PPLMPVYPVARG 97 (211)
T ss_pred HHHHHHHHHCCCCCEE-EeCCc---ccCCHHHHHhCCCCCCCEEEECCEEeeCHHHHHHHHHHhCCC-CCCCCCCHHHHH
Confidence 4556777778999999 88876 467899999999999999999999999999999999999986 579999999999
Q ss_pred HHHHHHhHHhcccccccccceeeceeeccCccchhchhhHHHHHHHHHHhH
Q psy13751 94 LVDQRLYFDAGEIFPTIKQIAVSPCLLVRTHIQGVSTHGLKDCILTLARYF 144 (149)
Q Consensus 94 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~~ 144 (149)
++++|+.++.+.+......+ . .+.+...+...+.+.+.+..|++.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~l~~~l~~le~~L 143 (211)
T PRK09481 98 ESRLMMHRIEKDWYSLMNKI-V----NGSASEADAARKQLREELLAIAPVF 143 (211)
T ss_pred HHHHHHHHHHHHHHHHHHHH-h----cCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999998876554433222 1 1111222334566777778887765
No 7
>PLN02473 glutathione S-transferase
Probab=99.84 E-value=4.2e-20 Score=138.10 Aligned_cols=130 Identities=21% Similarity=0.237 Sum_probs=99.6
Q ss_pred HHHHHHHHHHhcccccccEEEecCCCCCCChhHHhhCCCCCcCeEEeCCeeeecHHHHHHHHHHHhCCC-CCCCCCCHHH
Q psy13751 13 KEIAELKEEIRKKEMEISVLVTFAPGETLDTAFLKQNPRRSLPALVDGDLLICDSHAINAYLVSAYGKN-DVLYPKDSKD 91 (149)
Q Consensus 13 ~~~~~l~~~i~~~e~~~~~~v~l~~~~~~~~~~~~~nP~g~VP~L~d~g~~l~ES~aI~~YL~~~~~~~-~~L~p~~~~~ 91 (149)
...+++..+.+|++|+. +.+++.++++++++|+++||+|+||+|+++|.+|+||.||++||+++++.. ..|+|.++.+
T Consensus 14 ~~rv~~~L~e~gi~ye~-~~v~~~~~~~~~~~~~~~nP~g~vP~L~~~g~~l~ES~aI~~YL~~~~~~~~~~l~p~~~~~ 92 (214)
T PLN02473 14 PQRVLLCFLEKGIEFEV-IHVDLDKLEQKKPEHLLRQPFGQVPAIEDGDLKLFESRAIARYYATKYADQGTDLLGKTLEH 92 (214)
T ss_pred hHHHHHHHHHcCCCceE-EEecCcccccCCHHHHhhCCCCCCCeEEECCEEEEehHHHHHHHHHHcCCcCCCCCCCCHHH
Confidence 34566777778999999 999999888999999999999999999999999999999999999999742 3699999999
Q ss_pred HHHHHHHHhHHhcccccccccceeece----eeccCc---cchhchhhHHHHHHHHHHhH
Q psy13751 92 RALVDQRLYFDAGEIFPTIKQIAVSPC----LLVRTH---IQGVSTHGLKDCILTLARYF 144 (149)
Q Consensus 92 ~a~~~~~l~~~~~~~~~~~~~~~~~~~----~~~~~~---~~~~~~~~l~~~l~~le~~~ 144 (149)
++++++|+.|..+.+.+.+... +... ..+... ..+.....+.+.+..||+.+
T Consensus 93 ra~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L 151 (214)
T PLN02473 93 RAIVDQWVEVENNYFYAVALPL-VINLVFKPRLGEPCDVALVEELKVKFDKVLDVYENRL 151 (214)
T ss_pred HHHHHHHHHHHHhcccHHHHHH-HHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999988776543222 1111 111111 11223456677788888765
No 8
>PRK10542 glutathionine S-transferase; Provisional
Probab=99.83 E-value=4.5e-20 Score=136.54 Aligned_cols=125 Identities=19% Similarity=0.247 Sum_probs=97.1
Q ss_pred HHHHHHHHhcccccccEEEecCCCC-CCChhHHhhCCCCCcCeEE-eCCeeeecHHHHHHHHHHHhCCCCCCC-CCCHHH
Q psy13751 15 IAELKEEIRKKEMEISVLVTFAPGE-TLDTAFLKQNPRRSLPALV-DGDLLICDSHAINAYLVSAYGKNDVLY-PKDSKD 91 (149)
Q Consensus 15 ~~~l~~~i~~~e~~~~~~v~l~~~~-~~~~~~~~~nP~g~VP~L~-d~g~~l~ES~aI~~YL~~~~~~~~~L~-p~~~~~ 91 (149)
-+++.++.+|++|+. +.|++.+++ +++++|+++||.|+||+|+ +||.+|+||.||++||+++++. +.++ |.++.+
T Consensus 13 ~~~~~L~~~gi~~e~-~~v~~~~~~~~~~~~~~~~nP~g~vPvL~~~~g~~l~eS~aI~~YL~~~~~~-~~l~~p~~~~~ 90 (201)
T PRK10542 13 ASHITLRESGLDFTL-VSVDLAKKRLENGDDYLAINPKGQVPALLLDDGTLLTEGVAIMQYLADSVPD-RQLLAPVGSLS 90 (201)
T ss_pred HHHHHHHHcCCCceE-EEeecccccccCChHHHHhCcCCCCCeEEeCCCcEeecHHHHHHHHHHhCcc-cccCCCCCcHH
Confidence 346777888999999 999988764 5678999999999999998 6889999999999999999986 3455 677889
Q ss_pred HHHHHHHHhHHhcccccccccceeeceeeccCccchhchhhHHHHHHHHHHhH
Q psy13751 92 RALVDQRLYFDAGEIFPTIKQIAVSPCLLVRTHIQGVSTHGLKDCILTLARYF 144 (149)
Q Consensus 92 ~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~~ 144 (149)
|+++++|+.|..+.+.+.+..+ +.+. ..+...+...+.+.+.+..+|+.+
T Consensus 91 ra~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~l~~le~~L 140 (201)
T PRK10542 91 RYHTIEWLNYIATELHKGFTPL-FRPD--TPEEYKPTVRAQLEKKFQYVDEAL 140 (201)
T ss_pred HHHHHHHHHHHHhhhhhhhhhc-cCCC--ChHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999988887765555 3321 111122334566788888888765
No 9
>COG0625 Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.83 E-value=6.3e-20 Score=137.09 Aligned_cols=127 Identities=30% Similarity=0.377 Sum_probs=102.9
Q ss_pred HHHHHHHHHHhcccccccEEEecCCCCCCChhHHhhCCCCCcCeEEeCCe-eeecHHHHHHHHHHHhCCCCCCCCCCHH-
Q psy13751 13 KEIAELKEEIRKKEMEISVLVTFAPGETLDTAFLKQNPRRSLPALVDGDL-LICDSHAINAYLVSAYGKNDVLYPKDSK- 90 (149)
Q Consensus 13 ~~~~~l~~~i~~~e~~~~~~v~l~~~~~~~~~~~~~nP~g~VP~L~d~g~-~l~ES~aI~~YL~~~~~~~~~L~p~~~~- 90 (149)
.+.+++....+|++|++ +.|++.. ++++++|+++||.|+||+|++++. +|+||.||++||+++|+.+. |+|.++.
T Consensus 12 ~~kv~l~l~e~g~~ye~-~~v~~~~-~~~~~~~~~~nP~gkVPvL~~~~~~~l~ES~AI~~YL~~~~~~~~-l~p~~~~~ 88 (211)
T COG0625 12 SRKVRLALEEKGLPYEI-VLVDLDA-EQKPPDFLALNPLGKVPALVDDDGEVLTESGAILEYLAERYPGPP-LLPADPLA 88 (211)
T ss_pred hHHHHHHHHHcCCCceE-EEeCccc-ccCCHHHHhcCCCCCCCEEeeCCCCeeecHHHHHHHHHhhCCCCC-cCCCCchh
Confidence 66788888888999999 9999987 788999999999999999998766 89999999999999999633 9998774
Q ss_pred --HHHHHHHHHhHHhcccccccccceeeceeeccC-----ccchhchhhHHHHHHHHHHhH
Q psy13751 91 --DRALVDQRLYFDAGEIFPTIKQIAVSPCLLVRT-----HIQGVSTHGLKDCILTLARYF 144 (149)
Q Consensus 91 --~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~l~~le~~~ 144 (149)
+|+++.+|+.|..+.+.+.+... .... .... ...+.....+...+..+++.+
T Consensus 89 r~~r~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~le~~L 147 (211)
T COG0625 89 RRARALLLWWLFFAASDLHPVIGQR-RRAL-LGSEPELLEAALEAARAEIRALLALLEALL 147 (211)
T ss_pred HHHHHHHHHHHHHHHhcccHHHHHH-Hhhh-ccccccccHHHHHHHHHHHHHHHHHHHHHh
Confidence 89999999999999999988766 4444 3221 122344566777777777765
No 10
>KOG0406|consensus
Probab=99.82 E-value=6.7e-20 Score=138.07 Aligned_cols=123 Identities=16% Similarity=0.219 Sum_probs=104.0
Q ss_pred HHHHHHHHhcccccccEEEecCCCCCCChhHHhhC-CCCCcCeEEeCCeeeecHHHHHHHHHHHhCCCCCCCCCCHHHHH
Q psy13751 15 IAELKEEIRKKEMEISVLVTFAPGETLDTAFLKQN-PRRSLPALVDGDLLICDSHAINAYLVSAYGKNDVLYPKDSKDRA 93 (149)
Q Consensus 15 ~~~l~~~i~~~e~~~~~~v~l~~~~~~~~~~~~~n-P~g~VP~L~d~g~~l~ES~aI~~YL~~~~~~~~~L~p~~~~~~a 93 (149)
=++++++++|++|+. ..+|+. +++++|++.| |.+|||||+++|..|+||..|++||++.+++++.++|+||.+||
T Consensus 23 R~~iaL~~KgI~yE~-veedl~---~Ks~~ll~~np~hkKVPvL~Hn~k~i~ESliiveYiDe~w~~~~~iLP~DPy~Ra 98 (231)
T KOG0406|consen 23 RVRIALKLKGIPYEY-VEEDLT---NKSEWLLEKNPVHKKVPVLEHNGKPICESLIIVEYIDETWPSGPPILPSDPYERA 98 (231)
T ss_pred HHHHHHHhcCCceEE-EecCCC---CCCHHHHHhccccccCCEEEECCceehhhHHHHHHHHhhccCCCCCCCCCHHHHH
Confidence 478999999999999 888885 3899999999 89999999999999999999999999999966889999999999
Q ss_pred HHHHHHhHHhcccccccccceeeceeeccCccchhchhhHHHHHHHHHHhHc
Q psy13751 94 LVDQRLYFDAGEIFPTIKQIAVSPCLLVRTHIQGVSTHGLKDCILTLARYFL 145 (149)
Q Consensus 94 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~~~ 145 (149)
+++.|+.+++..+......+ .. ..+....+...+.+.+++..||+.+.
T Consensus 99 ~arfwa~~id~~~~~~~~~~-~~---~~~~e~~~~~~~e~~e~l~~lE~el~ 146 (231)
T KOG0406|consen 99 QARFWAEYIDKKVFFVGRFV-VA---AKGGEEQEAAKEELREALKVLEEELG 146 (231)
T ss_pred HHHHHHHHHHhHHHHHHHHH-Hh---hcCchHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999998776655444 11 12334455567778899999998875
No 11
>TIGR01262 maiA maleylacetoacetate isomerase. Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism.
Probab=99.80 E-value=3.9e-19 Score=132.28 Aligned_cols=132 Identities=23% Similarity=0.209 Sum_probs=99.8
Q ss_pred chHHHHHHHHHHhcccccccEEEecC-CCCCCChhHHhhCCCCCcCeEEeCCeeeecHHHHHHHHHHHhCCCCCCCCCCH
Q psy13751 11 QDKEIAELKEEIRKKEMEISVLVTFA-PGETLDTAFLKQNPRRSLPALVDGDLLICDSHAINAYLVSAYGKNDVLYPKDS 89 (149)
Q Consensus 11 ~~~~~~~l~~~i~~~e~~~~~~v~l~-~~~~~~~~~~~~nP~g~VP~L~d~g~~l~ES~aI~~YL~~~~~~~~~L~p~~~ 89 (149)
...+.+++..+.+|++|+. +.++.. .+++++++|+++||+|+||+|+++|.+|+||.||++||+++++. ..|+|.++
T Consensus 9 ~~~~~v~~~l~~~gi~~~~-~~v~~~~~~~~~~~~~~~~nP~g~vP~L~~~g~~l~ES~aI~~yl~~~~~~-~~l~p~~~ 86 (210)
T TIGR01262 9 SCSYRVRIALALKGIDYEY-VPVNLLRDGEQRSPEFLALNPQGLVPTLDIDGEVLTQSLAIIEYLEETYPD-PPLLPADP 86 (210)
T ss_pred CchHHHHHHHHHCCCCceE-EecccccccccCChhhhhcCCCCcCCEEEECCEEeecHHHHHHHHHHhCCC-CCCCCCCH
Confidence 3456678888888999999 888873 34667889999999999999999999999999999999999986 56999999
Q ss_pred HHHHHHHHHHhHHhcccccccccceeeceee---cc--CccchhchhhHHHHHHHHHHhHc
Q psy13751 90 KDRALVDQRLYFDAGEIFPTIKQIAVSPCLL---VR--THIQGVSTHGLKDCILTLARYFL 145 (149)
Q Consensus 90 ~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~l~~~l~~le~~~~ 145 (149)
.+++++++|+.++.+.+.+..... +..... +. ....+...+.+.+.+..||+.+-
T Consensus 87 ~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~ 146 (210)
T TIGR01262 87 IKRARVRALALLIACDIHPLNNLR-VLQYLREKLGVEEEARNRWYQHWISKGFAALEALLQ 146 (210)
T ss_pred HHHHHHHHHHHHHhcccChhhhhh-HHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999987776543211 111111 11 11122234557788888988864
No 12
>PRK11752 putative S-transferase; Provisional
Probab=99.79 E-value=1.1e-18 Score=135.18 Aligned_cols=115 Identities=23% Similarity=0.365 Sum_probs=85.5
Q ss_pred cccccccEEEecCCCCCCChhHHhhCCCCCcCeEEeC----CeeeecHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHH
Q psy13751 24 KKEMEISVLVTFAPGETLDTAFLKQNPRRSLPALVDG----DLLICDSHAINAYLVSAYGKNDVLYPKDSKDRALVDQRL 99 (149)
Q Consensus 24 ~~e~~~~~~v~l~~~~~~~~~~~~~nP~g~VP~L~d~----g~~l~ES~aI~~YL~~~~~~~~~L~p~~~~~~a~~~~~l 99 (149)
|++|+. +.|++.++++.+++|+++||.|+||+|+++ +.+|+||.||++||+++|+. |+|.++.+++++++|+
T Consensus 72 gl~ye~-~~v~~~~~~~~~~e~~~iNP~GkVP~Lv~~dg~~~~~L~ES~AIl~YL~~~~~~---L~P~~~~era~v~~wl 147 (264)
T PRK11752 72 GAEYDA-WLIRIGEGDQFSSGFVEINPNSKIPALLDRSGNPPIRVFESGAILLYLAEKFGA---FLPKDLAARTETLNWL 147 (264)
T ss_pred CCceEE-EEecCccccccCHHHHhhCCCCCCCEEEeCCCCCCeEEEcHHHHHHHHHHhcCC---cCCCCHHHHHHHHHHH
Confidence 788999 999998888889999999999999999974 37999999999999999973 9999999999999999
Q ss_pred hHHhcccccccccceeecee-eccCc---cchhchhhHHHHHHHHHHhH
Q psy13751 100 YFDAGEIFPTIKQIAVSPCL-LVRTH---IQGVSTHGLKDCILTLARYF 144 (149)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~l~~~l~~le~~~ 144 (149)
.|..+.+ +.+... +.... ..... ..+.....+.+.+..||+.+
T Consensus 148 ~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~L~~le~~L 194 (264)
T PRK11752 148 FWQQGSA-PFLGGG-FGHFYAYAPEKIEYAINRFTMEAKRQLDVLDKQL 194 (264)
T ss_pred HHHhhhh-hHHHHH-HHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHh
Confidence 9987654 212111 11110 11111 11223445677788888765
No 13
>PRK10357 putative glutathione S-transferase; Provisional
Probab=99.76 E-value=5.4e-18 Score=125.65 Aligned_cols=131 Identities=15% Similarity=0.100 Sum_probs=97.3
Q ss_pred cCchHHHHHHHHHHhcccccccEEEecCCCCCCChhHHhhCCCCCcCeEE-eCCeeeecHHHHHHHHHHHhCCCCCCCCC
Q psy13751 9 DNQDKEIAELKEEIRKKEMEISVLVTFAPGETLDTAFLKQNPRRSLPALV-DGDLLICDSHAINAYLVSAYGKNDVLYPK 87 (149)
Q Consensus 9 ~~~~~~~~~l~~~i~~~e~~~~~~v~l~~~~~~~~~~~~~nP~g~VP~L~-d~g~~l~ES~aI~~YL~~~~~~~~~L~p~ 87 (149)
.|...+.+++..+..|++|+. +.++... .++++.++||+|+||+|+ ++|.+|+||.||++||+++++. ..|+|.
T Consensus 8 ~s~~~~~v~~~L~~~gv~ye~-~~~~~~~---~~~~~~~~nP~g~vP~L~~~~g~~l~eS~aI~~yL~~~~~~-~~l~p~ 82 (202)
T PRK10357 8 TSPFVRKISILLLEKGITFEF-VNELPYN---ADNGVAQYNPLGKVPALVTEEGECWFDSPIIAEYIELLNVA-PAMLPR 82 (202)
T ss_pred CCchHHHHHHHHHHcCCCCeE-EecCCCC---CchhhhhcCCccCCCeEEeCCCCeeecHHHHHHHHHHhCCC-CCCCCC
Confidence 455666778888889999999 8777643 346788899999999998 6889999999999999999875 569999
Q ss_pred CHHHHHHHHHHHhHHhcccccccccceeeceeeccCccc---hhchhhHHHHHHHHHHhHc
Q psy13751 88 DSKDRALVDQRLYFDAGEIFPTIKQIAVSPCLLVRTHIQ---GVSTHGLKDCILTLARYFL 145 (149)
Q Consensus 88 ~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~l~~le~~~~ 145 (149)
++.+++++++|+.|..+.+......+ ............ +...+.+.+.++.||+.+.
T Consensus 83 ~~~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~ 142 (202)
T PRK10357 83 DPLAALRVRQLEALADGIMDAALVSV-REQARPAAQQSEDELLRQREKINRSLDALEGYLV 142 (202)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCccccccHHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999998877665554333 221111111111 2345567788888888763
No 14
>cd03050 GST_N_Theta GST_N family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenation of dihalomethanes. This is an essential process in methylotrophic bacteria to enable them to use chloromethane and DC
Probab=99.67 E-value=3.8e-16 Score=98.97 Aligned_cols=68 Identities=31% Similarity=0.460 Sum_probs=60.9
Q ss_pred CchHHHHHHHHHHhcccccccEEEecCCCCCCChhHHhhCCCCCcCeEEeCCeeeecHHHHHHHHHHHh
Q psy13751 10 NQDKEIAELKEEIRKKEMEISVLVTFAPGETLDTAFLKQNPRRSLPALVDGDLLICDSHAINAYLVSAY 78 (149)
Q Consensus 10 ~~~~~~~~l~~~i~~~e~~~~~~v~l~~~~~~~~~~~~~nP~g~VP~L~d~g~~l~ES~aI~~YL~~~~ 78 (149)
|++.+.+++..+.+|++|+. +.++...+++..++|+++||.|+||+|+++|.+|+||.||++||+++|
T Consensus 9 s~~~~~v~~~l~~~g~~~~~-~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~Yl~~~~ 76 (76)
T cd03050 9 SQPSRAVYIFLKLNKIPFEE-CPIDLRKGEQLTPEFKKINPFGKVPAIVDGDFTLAESVAILRYLARKF 76 (76)
T ss_pred ChhHHHHHHHHHHcCCCcEE-EEecCCCCCcCCHHHHHhCcCCCCCEEEECCEEEEcHHHHHHHHHhhC
Confidence 44566778888899999999 999988777778899999999999999999999999999999999875
No 15
>cd03057 GST_N_Beta GST_N family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site forms a covalent bond with GSH.
Probab=99.66 E-value=4.3e-16 Score=98.88 Aligned_cols=66 Identities=24% Similarity=0.277 Sum_probs=59.7
Q ss_pred HHHHHHHHHHhcccccccEEEecCCCCCCChhHHhhCCCCCcCeEEeC-CeeeecHHHHHHHHHHHhC
Q psy13751 13 KEIAELKEEIRKKEMEISVLVTFAPGETLDTAFLKQNPRRSLPALVDG-DLLICDSHAINAYLVSAYG 79 (149)
Q Consensus 13 ~~~~~l~~~i~~~e~~~~~~v~l~~~~~~~~~~~~~nP~g~VP~L~d~-g~~l~ES~aI~~YL~~~~~ 79 (149)
...+++..+..|++|+. +.++..++++++++|+++||.|+||+|+++ |..|+||.||++||+++||
T Consensus 11 ~~~v~~~l~~~~i~~~~-~~~~~~~~~~~~~~~~~~np~~~vP~l~~~~g~~l~eS~aI~~yL~~~~p 77 (77)
T cd03057 11 SLAPHIALEELGLPFEL-VRVDLRTKTQKGADYLAINPKGQVPALVLDDGEVLTESAAILQYLADLHP 77 (77)
T ss_pred hHHHHHHHHHcCCCceE-EEEecccCccCCHhHHHhCCCCCCCEEEECCCcEEEcHHHHHHHHHHhCc
Confidence 44678888889999999 999988888889999999999999999976 8999999999999999875
No 16
>PF02798 GST_N: Glutathione S-transferase, N-terminal domain; InterPro: IPR004045 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of Cephalopoda is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Soluble GSTs activate glutathione (GSH) to GS-. In many GSTs, this is accomplished by a Tyr at H-bonding distance from the sulphur of GSH. These enzymes catalyse nucleophilic attack by reduced glutathione (GSH) on nonpolar compounds that contain an electrophillic carbon, nitrogen, or sulphur atom []. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold, with each monomer composed of two distinct domains []. The N-terminal domain forms a thioredoxin-like fold that binds the glutathione moiety, while the C-terminal domain contains several hydrophobic alpha-helices that specifically bind hydrophobic substrates. This entry represents the N-terminal domain of GST.; GO: 0005515 protein binding; PDB: 2VCT_H 2WJU_B 4ACS_A 1BYE_D 1AXD_B 2VCV_P 1TDI_A 1JLV_D 1Y6E_A 1U88_B ....
Probab=99.66 E-value=3.8e-16 Score=99.37 Aligned_cols=64 Identities=36% Similarity=0.464 Sum_probs=57.6
Q ss_pred hHHHHHHHHHHhcccccccEEEecCCCCCCChhHHhhCCC-CCcCeEEeC-CeeeecHHHHHHHHHH
Q psy13751 12 DKEIAELKEEIRKKEMEISVLVTFAPGETLDTAFLKQNPR-RSLPALVDG-DLLICDSHAINAYLVS 76 (149)
Q Consensus 12 ~~~~~~l~~~i~~~e~~~~~~v~l~~~~~~~~~~~~~nP~-g~VP~L~d~-g~~l~ES~aI~~YL~~ 76 (149)
.-+..|+..+.+|++|+. +.+++..+++++++|++.||. |+||+|+++ |.+|+||.||++||++
T Consensus 11 ~~~~~r~~l~~~gv~~e~-~~v~~~~~~~~~~e~~~~~p~~g~vP~l~~~~~~~l~es~AI~~YLa~ 76 (76)
T PF02798_consen 11 RSERIRLLLAEKGVEYED-VRVDFEKGEHKSPEFLAINPMFGKVPALEDGDGFVLTESNAILRYLAR 76 (76)
T ss_dssp TTHHHHHHHHHTT--EEE-EEEETTTTGGGSHHHHHHTTTSSSSSEEEETTTEEEESHHHHHHHHHH
T ss_pred chHHHHHHHHHhcccCce-EEEecccccccchhhhhcccccceeeEEEECCCCEEEcHHHHHHHhCC
Confidence 456788888999999999 999999999988999999999 999999998 9999999999999985
No 17
>cd03052 GST_N_GDAP1 GST_N family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal TRX-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=99.66 E-value=3.9e-16 Score=98.67 Aligned_cols=61 Identities=28% Similarity=0.421 Sum_probs=56.1
Q ss_pred HHHHHHHHHhcccccccEEEecCCCCCCChhHHhhCCCCCcCeEEeCCeeeecHHHHHHHHH
Q psy13751 14 EIAELKEEIRKKEMEISVLVTFAPGETLDTAFLKQNPRRSLPALVDGDLLICDSHAINAYLV 75 (149)
Q Consensus 14 ~~~~l~~~i~~~e~~~~~~v~l~~~~~~~~~~~~~nP~g~VP~L~d~g~~l~ES~aI~~YL~ 75 (149)
+.+++..+.+|++|++ +.+++..+++++++|+++||.|+||+|+++|.+|+||.||++||+
T Consensus 13 ~rv~~~L~e~gl~~e~-~~v~~~~~~~~~~~~~~inP~g~vP~L~~~g~~l~Es~aI~~yLe 73 (73)
T cd03052 13 QKVRLVIAEKGLRCEE-YDVSLPLSEHNEPWFMRLNPTGEVPVLIHGDNIICDPTQIIDYLE 73 (73)
T ss_pred HHHHHHHHHcCCCCEE-EEecCCcCccCCHHHHHhCcCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 4667888888999999 999998888889999999999999999999999999999999984
No 18
>PLN02378 glutathione S-transferase DHAR1
Probab=99.64 E-value=5.2e-15 Score=111.06 Aligned_cols=113 Identities=22% Similarity=0.240 Sum_probs=81.2
Q ss_pred HHHHHHHHHHhcccccccEEEecCCCCCCChhHHhhCCCCCcCeEEeCCeeeecHHHHHHHHHHHhCCCCCCCCCCHHHH
Q psy13751 13 KEIAELKEEIRKKEMEISVLVTFAPGETLDTAFLKQNPRRSLPALVDGDLLICDSHAINAYLVSAYGKNDVLYPKDSKDR 92 (149)
Q Consensus 13 ~~~~~l~~~i~~~e~~~~~~v~l~~~~~~~~~~~~~nP~g~VP~L~d~g~~l~ES~aI~~YL~~~~~~~~~L~p~~~~~~ 92 (149)
-+-+++..+..|++|++ +.|++. +++++|+++||.|+||+|+++|.+|+||.||++||+++|+. ..+ .++.++
T Consensus 23 ~~rv~~~L~e~gl~~e~-~~v~~~---~~~~~~l~inP~G~VPvL~~~~~~l~ES~aI~~YL~~~~~~-~~l--~~~~~~ 95 (213)
T PLN02378 23 SQRALLTLEEKSLTYKI-HLINLS---DKPQWFLDISPQGKVPVLKIDDKWVTDSDVIVGILEEKYPD-PPL--KTPAEF 95 (213)
T ss_pred hHHHHHHHHHcCCCCeE-EEeCcc---cCCHHHHHhCCCCCCCEEEECCEEecCHHHHHHHHHHhCCC-CCC--CCHHHH
Confidence 45567788888999999 999885 35789999999999999999999999999999999999985 334 356778
Q ss_pred HHHHHHHhHHhcccccccccceeeceeeccCccchhchhhHHHHHHHHHHhHc
Q psy13751 93 ALVDQRLYFDAGEIFPTIKQIAVSPCLLVRTHIQGVSTHGLKDCILTLARYFL 145 (149)
Q Consensus 93 a~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~~~ 145 (149)
+++..++.. .+..+ +.. . ...+...+.+.+.+..+|+.+.
T Consensus 96 a~i~~~~~~-------~~~~~-~~~----~-~~~~~~~~~~~~~l~~le~~L~ 135 (213)
T PLN02378 96 ASVGSNIFG-------TFGTF-LKS----K-DSNDGSEHALLVELEALENHLK 135 (213)
T ss_pred HHHHHHHHH-------HHHHH-Hhc----C-ChhhHHHHHHHHHHHHHHHHHh
Confidence 877654432 12222 111 1 1112234566677888887764
No 19
>cd03046 GST_N_GTT1_like GST_N family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endoplasmic reticulum. Its expression is induced after diauxic shift and remains high throughout the stationary phase. S. pomb
Probab=99.64 E-value=1.3e-15 Score=96.20 Aligned_cols=65 Identities=37% Similarity=0.483 Sum_probs=59.6
Q ss_pred HHHHHHHHHhcccccccEEEecCCCCCCChhHHhhCCCCCcCeEEeCCeeeecHHHHHHHHHHHhC
Q psy13751 14 EIAELKEEIRKKEMEISVLVTFAPGETLDTAFLKQNPRRSLPALVDGDLLICDSHAINAYLVSAYG 79 (149)
Q Consensus 14 ~~~~l~~~i~~~e~~~~~~v~l~~~~~~~~~~~~~nP~g~VP~L~d~g~~l~ES~aI~~YL~~~~~ 79 (149)
+.+++..+.+|++|+. +.++..++++++++|+++||.|+||+|+++|..|+||.||++||+++|+
T Consensus 12 ~~v~~~l~~~~i~~~~-~~~~~~~~~~~~~~~~~~~p~~~vP~l~~~g~~l~es~aI~~yL~~~~~ 76 (76)
T cd03046 12 FRILWLLEELGLPYEL-VLYDRGPGEQAPPEYLAINPLGKVPVLVDGDLVLTESAAIILYLAEKYG 76 (76)
T ss_pred HHHHHHHHHcCCCcEE-EEeCCCCCccCCHHHHhcCCCCCCCEEEECCEEEEcHHHHHHHHHHhCc
Confidence 4678888999999999 9999877778899999999999999999999999999999999999875
No 20
>cd03048 GST_N_Ure2p_like GST_N family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The N-terminal TRX-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. Characterized GSTs in this subfamily include Aspergillus fumigatus GSTs 1 and 2, and
Probab=99.63 E-value=1.4e-15 Score=97.41 Aligned_cols=66 Identities=33% Similarity=0.396 Sum_probs=59.7
Q ss_pred HHHHHHHHHHhcccccccEEEecCCCCCCChhHHhhCCCCCcCeEEeC---CeeeecHHHHHHHHHHHhC
Q psy13751 13 KEIAELKEEIRKKEMEISVLVTFAPGETLDTAFLKQNPRRSLPALVDG---DLLICDSHAINAYLVSAYG 79 (149)
Q Consensus 13 ~~~~~l~~~i~~~e~~~~~~v~l~~~~~~~~~~~~~nP~g~VP~L~d~---g~~l~ES~aI~~YL~~~~~ 79 (149)
.+.+++..+.+|++|++ +.+++..+++++++|+++||.|+||+|+++ |..|+||.||++||+++|+
T Consensus 12 ~~~v~~~l~~~gl~~~~-~~~~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~g~~l~eS~aI~~yL~~~~~ 80 (81)
T cd03048 12 GFKVSIMLEELGLPYEI-HPVDISKGEQKKPEFLKINPNGRIPAIVDHNGTPLTVFESGAILLYLAEKYD 80 (81)
T ss_pred hHHHHHHHHHcCCCcEE-EEecCcCCcccCHHHHHhCcCCCCCEEEeCCCCceEEEcHHHHHHHHHHHhC
Confidence 46678888888999999 999987777888999999999999999987 8999999999999999986
No 21
>cd03045 GST_N_Delta_Epsilon GST_N family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites that are easily excreted. They are also implicated in protection against cellular damage by oxidative stress.
Probab=99.61 E-value=2.3e-15 Score=94.60 Aligned_cols=63 Identities=35% Similarity=0.543 Sum_probs=57.6
Q ss_pred HHHHHHHHHHhcccccccEEEecCCCCCCChhHHhhCCCCCcCeEEeCCeeeecHHHHHHHHHH
Q psy13751 13 KEIAELKEEIRKKEMEISVLVTFAPGETLDTAFLKQNPRRSLPALVDGDLLICDSHAINAYLVS 76 (149)
Q Consensus 13 ~~~~~l~~~i~~~e~~~~~~v~l~~~~~~~~~~~~~nP~g~VP~L~d~g~~l~ES~aI~~YL~~ 76 (149)
-+.+++..+..|++|+. +.+++..++++.++|+++||.|+||+|+++|..|+||.||++||++
T Consensus 12 ~~~v~~~l~~~gi~~e~-~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~l~es~aI~~yL~~ 74 (74)
T cd03045 12 CRAVLLTAKALGLELNL-KEVNLMKGEHLKPEFLKLNPQHTVPTLVDNGFVLWESHAILIYLVE 74 (74)
T ss_pred HHHHHHHHHHcCCCCEE-EEecCccCCcCCHHHHhhCcCCCCCEEEECCEEEEcHHHHHHHHhC
Confidence 45678888889999999 9999888888889999999999999999999999999999999974
No 22
>cd03061 GST_N_CLIC GST_N family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division and apoptosis. They can exist in both water-soluble and membrane-bound states, and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and it adopts a fold similar to GSTs, containing an N-terminal domain with a TRX fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. The CLI
Probab=99.60 E-value=5.2e-15 Score=97.22 Aligned_cols=70 Identities=10% Similarity=0.011 Sum_probs=60.8
Q ss_pred hcccCchHHHHHHHHHHhcccccccEEEecCCCCCCChhHHhhCCCCCcCeEEeCCeeeecHHHHHHHHHHHhCC
Q psy13751 6 DKFDNQDKEIAELKEEIRKKEMEISVLVTFAPGETLDTAFLKQNPRRSLPALVDGDLLICDSHAINAYLVSAYGK 80 (149)
Q Consensus 6 ~~~~~~~~~~~~l~~~i~~~e~~~~~~v~l~~~~~~~~~~~~~nP~g~VP~L~d~g~~l~ES~aI~~YL~~~~~~ 80 (149)
.+++.. .+-+|+..+.+|++|++ ..|+.. +++++|+++||.|+||+|+++|.+|+||.+|++||++++++
T Consensus 19 ~g~cpf-~~rvrl~L~eKgi~ye~-~~vd~~---~~p~~~~~~nP~g~vPvL~~~~~~i~eS~~I~eYLde~~~~ 88 (91)
T cd03061 19 IGNCPF-CQRLFMVLWLKGVVFNV-TTVDMK---RKPEDLKDLAPGTQPPFLLYNGEVKTDNNKIEEFLEETLCP 88 (91)
T ss_pred CCCChh-HHHHHHHHHHCCCceEE-EEeCCC---CCCHHHHHhCCCCCCCEEEECCEEecCHHHHHHHHHHHccC
Confidence 445544 45678999999999999 888874 45799999999999999999999999999999999999875
No 23
>cd03047 GST_N_2 GST_N family, unknown subfamily 2; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The sequence from Burkholderia cepacia was identified as part of a gene cluster involved in the degradation of 2,4,5-trichlorophenoxyacetic acid. Some GSTs (e.g. Class Zeta and Delta) are known to catalyze dechlorination reactions.
Probab=99.60 E-value=3.9e-15 Score=93.62 Aligned_cols=63 Identities=25% Similarity=0.269 Sum_probs=56.5
Q ss_pred hHHHHHHHHHHhcccccccEEEecCCCCCCChhHHhhCCCCCcCeEEeCCeeeecHHHHHHHHH
Q psy13751 12 DKEIAELKEEIRKKEMEISVLVTFAPGETLDTAFLKQNPRRSLPALVDGDLLICDSHAINAYLV 75 (149)
Q Consensus 12 ~~~~~~l~~~i~~~e~~~~~~v~l~~~~~~~~~~~~~nP~g~VP~L~d~g~~l~ES~aI~~YL~ 75 (149)
....+++..+.+|++|++ +.++...++++.++|+++||+|+||+|+++|..|+||.||++||+
T Consensus 11 ~~~~v~~~L~~~~l~~~~-~~~~~~~~~~~~~~~~~~nP~~~vP~L~~~~~~l~eS~aI~~YL~ 73 (73)
T cd03047 11 NVQKVLWLLDELGLPYER-IDAGGQFGGLDTPEFLAMNPNGRVPVLEDGDFVLWESNAILRYLA 73 (73)
T ss_pred chHHHHHHHHHcCCCCEE-EEeccccccccCHHHHhhCCCCCCCEEEECCEEEECHHHHHHHhC
Confidence 456788888889999999 888876667788999999999999999999999999999999984
No 24
>TIGR00862 O-ClC intracellular chloride channel protein. These proteins are thought to function in the regulation of the membrane potential and in transepithelial ion absorption and secretion in the kidney.
Probab=99.59 E-value=2.6e-14 Score=109.09 Aligned_cols=117 Identities=14% Similarity=0.139 Sum_probs=81.1
Q ss_pred HHHHHHHHHHhcccccccEEEecCCCCCCChhHHhhCCCCCcCeEEeCCeeeecHHHHHHHHHHHhCCC--CCCCCCCHH
Q psy13751 13 KEIAELKEEIRKKEMEISVLVTFAPGETLDTAFLKQNPRRSLPALVDGDLLICDSHAINAYLVSAYGKN--DVLYPKDSK 90 (149)
Q Consensus 13 ~~~~~l~~~i~~~e~~~~~~v~l~~~~~~~~~~~~~nP~g~VP~L~d~g~~l~ES~aI~~YL~~~~~~~--~~L~p~~~~ 90 (149)
.+-+++....+|++|++ +.||+.. ++++|+++||.|+||||+++|.+|+||.||++||+++|+++ +.+.|.++.
T Consensus 22 ~~rv~i~L~ekgi~~e~-~~vd~~~---~~~~fl~inP~g~vPvL~~~g~~l~ES~aI~eYL~e~~~~~~~p~l~p~~~~ 97 (236)
T TIGR00862 22 SQRLFMILWLKGVVFNV-TTVDLKR---KPEDLQNLAPGTHPPFLTYNTEVKTDVNKIEEFLEETLCPPRYPKLSPKHPE 97 (236)
T ss_pred HHHHHHHHHHcCCCcEE-EEECCCC---CCHHHHHHCcCCCCCEEEECCEEeecHHHHHHHHHHHcCCCCCCCCCCCCHH
Confidence 45667778889999999 9998864 47999999999999999999999999999999999999742 335555655
Q ss_pred HHHHHHHHHhHHhcccccccccceeeceeeccCccchhchhhHHHHHHHHHHhHc
Q psy13751 91 DRALVDQRLYFDAGEIFPTIKQIAVSPCLLVRTHIQGVSTHGLKDCILTLARYFL 145 (149)
Q Consensus 91 ~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~~~ 145 (149)
.++.... +.+.+..+ + . ...+...+...+.+.+.+..|++.+.
T Consensus 98 ~~~~~~~--------l~~~~~~~-~-~--~~~~~~~~~~~~~l~~~l~~Le~~L~ 140 (236)
T TIGR00862 98 SNTAGLD--------IFAKFSAY-I-K--NSNPEANDNLEKGLLKALKKLDDYLN 140 (236)
T ss_pred HHHHHHH--------HHHHHHHH-H-H--cCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5443211 11111121 1 0 11111223345667888888887763
No 25
>cd03053 GST_N_Phi GST_N family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Phi GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes are highly reactive toward chloroacetanilide and thiocarbamate herbicides. Some Phi GSTs have other functions including t
Probab=99.58 E-value=7.7e-15 Score=92.72 Aligned_cols=67 Identities=33% Similarity=0.424 Sum_probs=59.0
Q ss_pred CchHHHHHHHHHHhcccccccEEEecCCCCCCChhHHhhCCCCCcCeEEeCCeeeecHHHHHHHHHHH
Q psy13751 10 NQDKEIAELKEEIRKKEMEISVLVTFAPGETLDTAFLKQNPRRSLPALVDGDLLICDSHAINAYLVSA 77 (149)
Q Consensus 10 ~~~~~~~~l~~~i~~~e~~~~~~v~l~~~~~~~~~~~~~nP~g~VP~L~d~g~~l~ES~aI~~YL~~~ 77 (149)
|..-+.+|+..+..|++|+. +.++...+++++++|.++||.|+||+|+++|..|+||.||++||+++
T Consensus 10 s~~s~~v~~~l~~~~i~~~~-~~~~~~~~~~~~~~~~~~~P~~~vP~l~~~g~~l~es~aI~~yL~~~ 76 (76)
T cd03053 10 STCVRRVLLCLEEKGVDYEL-VPVDLTKGEHKSPEHLARNPFGQIPALEDGDLKLFESRAITRYLAEK 76 (76)
T ss_pred ChhHHHHHHHHHHcCCCcEE-EEeCccccccCCHHHHhhCCCCCCCEEEECCEEEEcHHHHHHHHhhC
Confidence 34456778888889999999 88888777778899999999999999999999999999999999863
No 26
>PLN02817 glutathione dehydrogenase (ascorbate)
Probab=99.58 E-value=2.5e-14 Score=110.97 Aligned_cols=81 Identities=21% Similarity=0.292 Sum_probs=68.5
Q ss_pred HHHHHHHHHHhcccccccEEEecCCCCCCChhHHhhCCCCCcCeEEeCCeeeecHHHHHHHHHHHhCCCCCCCCCCHHHH
Q psy13751 13 KEIAELKEEIRKKEMEISVLVTFAPGETLDTAFLKQNPRRSLPALVDGDLLICDSHAINAYLVSAYGKNDVLYPKDSKDR 92 (149)
Q Consensus 13 ~~~~~l~~~i~~~e~~~~~~v~l~~~~~~~~~~~~~nP~g~VP~L~d~g~~l~ES~aI~~YL~~~~~~~~~L~p~~~~~~ 92 (149)
.+-+++.++..|++|++ +.|++. +++++|+++||.|+||+|+++|..|+||.||++||+++|+. +.|. ++.++
T Consensus 76 s~rV~i~L~ekgi~ye~-~~vdl~---~~~~~fl~iNP~GkVPvL~~d~~~L~ES~aI~~YL~e~~p~-~~L~--~~~er 148 (265)
T PLN02817 76 CQRVLLTLEEKHLPYDM-KLVDLT---NKPEWFLKISPEGKVPVVKLDEKWVADSDVITQALEEKYPD-PPLA--TPPEK 148 (265)
T ss_pred HHHHHHHHHHcCCCCEE-EEeCcC---cCCHHHHhhCCCCCCCEEEECCEEEecHHHHHHHHHHHCCC-CCCC--CHHHH
Confidence 44567777888999999 888874 46799999999999999999899999999999999999986 3453 57789
Q ss_pred HHHHHHHh
Q psy13751 93 ALVDQRLY 100 (149)
Q Consensus 93 a~~~~~l~ 100 (149)
+++.+|+.
T Consensus 149 a~i~~~l~ 156 (265)
T PLN02817 149 ASVGSKIF 156 (265)
T ss_pred HHHHHHHH
Confidence 98887753
No 27
>cd03044 GST_N_EF1Bgamma GST_N family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal TRX-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role in prot
Probab=99.56 E-value=1.4e-14 Score=91.68 Aligned_cols=62 Identities=21% Similarity=0.245 Sum_probs=55.4
Q ss_pred HHHHHHHHHHhcccccccEEEecCCCCCCChhHHhhCCCCCcCeEEe-CCeeeecHHHHHHHHHH
Q psy13751 13 KEIAELKEEIRKKEMEISVLVTFAPGETLDTAFLKQNPRRSLPALVD-GDLLICDSHAINAYLVS 76 (149)
Q Consensus 13 ~~~~~l~~~i~~~e~~~~~~v~l~~~~~~~~~~~~~nP~g~VP~L~d-~g~~l~ES~aI~~YL~~ 76 (149)
-+.+++..+.+|++|+. +.++...+ +++++|+++||.|+||+|++ +|.+|+||.||++||++
T Consensus 12 ~~~~~~~l~~~gi~~~~-~~v~~~~~-~~~~~~~~~nP~~~vP~L~~~~g~~l~es~aI~~yL~~ 74 (75)
T cd03044 12 SLKILAAAKYNGLDVEI-VDFQPGKE-NKTPEFLKKFPLGKVPAFEGADGFCLFESNAIAYYVAN 74 (75)
T ss_pred HHHHHHHHHHcCCceEE-Eecccccc-cCCHHHHHhCCCCCCCEEEcCCCCEEeeHHHHHHHHhh
Confidence 56778888999999999 99998654 78899999999999999996 58899999999999985
No 28
>cd03075 GST_N_Mu GST_N family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the most abundant GSTs in human liver, skeletal muscle and brain, and are believed to provide protection against diseases inc
Probab=99.54 E-value=2.1e-14 Score=92.68 Aligned_cols=65 Identities=20% Similarity=0.250 Sum_probs=53.8
Q ss_pred HHHHHHHHHHhcccccccEEEecCCCCCC-ChhHHhh-----CCCCCcCeEEeCCeeeecHHHHHHHHHHHh
Q psy13751 13 KEIAELKEEIRKKEMEISVLVTFAPGETL-DTAFLKQ-----NPRRSLPALVDGDLLICDSHAINAYLVSAY 78 (149)
Q Consensus 13 ~~~~~l~~~i~~~e~~~~~~v~l~~~~~~-~~~~~~~-----nP~g~VP~L~d~g~~l~ES~aI~~YL~~~~ 78 (149)
-+..++..+..|++|+. +.|++.++++. .++|++. +|+|+||+|++||..|+||.||++||+++|
T Consensus 12 ~~~~~~~l~~~gi~~e~-~~v~~~~~~~~~~~~~~~~~~~~~~P~g~vP~L~~~g~~l~ES~AIl~YLa~~~ 82 (82)
T cd03075 12 AQPIRLLLEYTGEKYEE-KRYELGDAPDYDRSQWLNEKFKLGLDFPNLPYYIDGDVKLTQSNAILRYIARKH 82 (82)
T ss_pred cHHHHHHHHHcCCCcEE-EEeccCCccccchHhhhccchhcCCcCCCCCEEEECCEEEeehHHHHHHHhhcC
Confidence 35667788888999999 99998876653 4566532 299999999999999999999999999864
No 29
>cd03056 GST_N_4 GST_N family, unknown subfamily 4; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.54 E-value=2.8e-14 Score=89.17 Aligned_cols=62 Identities=29% Similarity=0.305 Sum_probs=56.5
Q ss_pred HHHHHHHHHHhcccccccEEEecCCCCCCChhHHhhCCCCCcCeEEeCCeeeecHHHHHHHHH
Q psy13751 13 KEIAELKEEIRKKEMEISVLVTFAPGETLDTAFLKQNPRRSLPALVDGDLLICDSHAINAYLV 75 (149)
Q Consensus 13 ~~~~~l~~~i~~~e~~~~~~v~l~~~~~~~~~~~~~nP~g~VP~L~d~g~~l~ES~aI~~YL~ 75 (149)
-+.+++..+..|++|+. +.++...+++++++|+++||.|+||+|+++|..|+||.||++||+
T Consensus 12 ~~~v~~~l~~~~~~~~~-~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~i~es~aI~~yl~ 73 (73)
T cd03056 12 CYKVRLLLALLGIPYEW-VEVDILKGETRTPEFLALNPNGEVPVLELDGRVLAESNAILVYLA 73 (73)
T ss_pred HHHHHHHHHHcCCCcEE-EEecCCCcccCCHHHHHhCCCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 46778888889999999 999987778889999999999999999999999999999999984
No 30
>PF13417 GST_N_3: Glutathione S-transferase, N-terminal domain; PDB: 3ERG_B 3IBH_A 3ERF_A 3UBL_A 3UBK_A 3IR4_A 3M8N_B 2R4V_A 2PER_A 2R5G_A ....
Probab=99.54 E-value=4.8e-14 Score=89.26 Aligned_cols=64 Identities=33% Similarity=0.411 Sum_probs=57.4
Q ss_pred HHHHHHHHHHhcccccccEEEecCCCCCCChhHHhhCCCCCcCeEEeCCeeeecHHHHHHHHHHHhCC
Q psy13751 13 KEIAELKEEIRKKEMEISVLVTFAPGETLDTAFLKQNPRRSLPALVDGDLLICDSHAINAYLVSAYGK 80 (149)
Q Consensus 13 ~~~~~l~~~i~~~e~~~~~~v~l~~~~~~~~~~~~~nP~g~VP~L~d~g~~l~ES~aI~~YL~~~~~~ 80 (149)
-+.+|+..+.+|++|++ +.++.. .+.++|.++||.|+||+|+++|..|+||.+|++||+++|+.
T Consensus 10 ~~kv~~~l~~~~i~~~~-~~v~~~---~~~~~~~~~~p~~~vPvL~~~g~~l~dS~~I~~yL~~~~~~ 73 (75)
T PF13417_consen 10 SQKVRLALEEKGIPYEL-VPVDPE---EKRPEFLKLNPKGKVPVLVDDGEVLTDSAAIIEYLEERYPG 73 (75)
T ss_dssp HHHHHHHHHHHTEEEEE-EEEBTT---STSHHHHHHSTTSBSSEEEETTEEEESHHHHHHHHHHHSTS
T ss_pred HHHHHHHHHHcCCeEEE-eccCcc---cchhHHHhhcccccceEEEECCEEEeCHHHHHHHHHHHcCC
Confidence 45788999999999999 888854 34799999999999999999999999999999999999985
No 31
>cd03042 GST_N_Zeta GST_N family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates but display modest GSH peroxidase activity. They are also implicated in the detoxification of the carcinogen dichloroacetic acid by catalyzing its dechlorination to glyoxylic acid.
Probab=99.53 E-value=3.6e-14 Score=88.71 Aligned_cols=63 Identities=29% Similarity=0.383 Sum_probs=56.9
Q ss_pred hHHHHHHHHHHhcccccccEEEecCCCCCCChhHHhhCCCCCcCeEEeCCeeeecHHHHHHHHH
Q psy13751 12 DKEIAELKEEIRKKEMEISVLVTFAPGETLDTAFLKQNPRRSLPALVDGDLLICDSHAINAYLV 75 (149)
Q Consensus 12 ~~~~~~l~~~i~~~e~~~~~~v~l~~~~~~~~~~~~~nP~g~VP~L~d~g~~l~ES~aI~~YL~ 75 (149)
.-..+++..+..|++|+. +.++...+.++.++|+++||.|+||+|+++|..++||.||++||+
T Consensus 11 ~~~~~~~~l~~~gi~~~~-~~~~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~l~es~aI~~yL~ 73 (73)
T cd03042 11 ASYRVRIALNLKGLDYEY-VPVNLLKGEQLSPAYRALNPQGLVPTLVIDGLVLTQSLAIIEYLD 73 (73)
T ss_pred chHHHHHHHHHcCCCCeE-EEecCccCCcCChHHHHhCCCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 345668888889999999 999988777888999999999999999999999999999999984
No 32
>cd03043 GST_N_1 GST_N family, unknown subfamily 1; composed of uncharacterized proteins, predominantly from bacteria, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.52 E-value=5.1e-14 Score=88.82 Aligned_cols=64 Identities=27% Similarity=0.310 Sum_probs=55.4
Q ss_pred CchHHHHHHHHHHhcccccccEEEecCCCCCCChhHHhhCCCCCcCeEEeCCeeeecHHHHHHHHH
Q psy13751 10 NQDKEIAELKEEIRKKEMEISVLVTFAPGETLDTAFLKQNPRRSLPALVDGDLLICDSHAINAYLV 75 (149)
Q Consensus 10 ~~~~~~~~l~~~i~~~e~~~~~~v~l~~~~~~~~~~~~~nP~g~VP~L~d~g~~l~ES~aI~~YL~ 75 (149)
|-....+++..+.+|++|+. +.++...+ ++.++|+++||+|+||+|+++|.+|+||.||++||+
T Consensus 10 s~~s~~v~~~L~~~gl~~e~-~~v~~~~~-~~~~~~~~~nP~g~vP~L~~~g~~l~eS~aI~~YL~ 73 (73)
T cd03043 10 SSWSLRPWLLLKAAGIPFEE-ILVPLYTP-DTRARILEFSPTGKVPVLVDGGIVVWDSLAICEYLA 73 (73)
T ss_pred CHHHHHHHHHHHHcCCCCEE-EEeCCCCc-cccHHHHhhCCCCcCCEEEECCEEEEcHHHHHHHhC
Confidence 33466778889999999999 88887653 456899999999999999999999999999999984
No 33
>PF13409 GST_N_2: Glutathione S-transferase, N-terminal domain; PDB: 3C8E_B 3M1G_A 3R3E_A 3O3T_A 1RK4_A 1K0O_B 1K0N_A 3QR6_A 3SWL_A 3TGZ_B ....
Probab=99.51 E-value=6.5e-14 Score=87.65 Aligned_cols=63 Identities=33% Similarity=0.441 Sum_probs=52.7
Q ss_pred HHHHHHHHHhcccccccEEEec-CCCCCCChhHHhhCCCCCcCeEEe-CCeeeecHHHHHHHHHHH
Q psy13751 14 EIAELKEEIRKKEMEISVLVTF-APGETLDTAFLKQNPRRSLPALVD-GDLLICDSHAINAYLVSA 77 (149)
Q Consensus 14 ~~~~l~~~i~~~e~~~~~~v~l-~~~~~~~~~~~~~nP~g~VP~L~d-~g~~l~ES~aI~~YL~~~ 77 (149)
+-+++..+..|++|++ ..+.. ..+.+++++|.++||.|+||+|++ +|.+++||.+|++||+++
T Consensus 6 ~Rv~i~l~~~gl~~~~-~~v~~~~~~~~~~~~~~~~~p~~~VP~L~~~~g~vi~eS~~I~~yL~~~ 70 (70)
T PF13409_consen 6 HRVRIALEEKGLPYEI-KVVPLIPKGEQKPPEFLALNPRGKVPVLVDPDGTVINESLAILEYLEEQ 70 (70)
T ss_dssp HHHHHHHHHHTGTCEE-EEEETTTTBCTTCHBHHHHSTT-SSSEEEETTTEEEESHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCCCEE-EEEeeecCccccChhhhccCcCeEEEEEEECCCCEeeCHHHHHHHHhcC
Confidence 3467888888999999 77754 345677799999999999999997 789999999999999874
No 34
>cd03059 GST_N_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal TRX-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=99.51 E-value=6.5e-14 Score=87.62 Aligned_cols=62 Identities=24% Similarity=0.359 Sum_probs=53.6
Q ss_pred HHHHHHHHHHhcccccccEEEecCCCCCCChhHHhhCCCCCcCeEEeCCeeeecHHHHHHHHHHHh
Q psy13751 13 KEIAELKEEIRKKEMEISVLVTFAPGETLDTAFLKQNPRRSLPALVDGDLLICDSHAINAYLVSAY 78 (149)
Q Consensus 13 ~~~~~l~~~i~~~e~~~~~~v~l~~~~~~~~~~~~~nP~g~VP~L~d~g~~l~ES~aI~~YL~~~~ 78 (149)
.+.+++..+..|++|+. +.++. .+++++|+++||.|+||+|+++|..|+||.||++||+++|
T Consensus 12 ~~~v~~~l~~~gi~~~~-~~v~~---~~~~~~~~~~~p~~~vP~l~~~~~~l~es~aI~~yL~~~~ 73 (73)
T cd03059 12 SHRVRIVLAEKGVSVEI-IDVDP---DNPPEDLAELNPYGTVPTLVDRDLVLYESRIIMEYLDERF 73 (73)
T ss_pred HHHHHHHHHHcCCccEE-EEcCC---CCCCHHHHhhCCCCCCCEEEECCEEEEcHHHHHHHHHhhC
Confidence 45567777888999999 77775 3567899999999999999999999999999999999875
No 35
>PTZ00057 glutathione s-transferase; Provisional
Probab=99.50 E-value=1.5e-13 Score=102.50 Aligned_cols=116 Identities=18% Similarity=0.179 Sum_probs=76.1
Q ss_pred HHHHHHHHHHhcccccccEEEecCCCCCCChhHH--------hhCCCCCcCeEEeCCeeeecHHHHHHHHHHHhCCCCCC
Q psy13751 13 KEIAELKEEIRKKEMEISVLVTFAPGETLDTAFL--------KQNPRRSLPALVDGDLLICDSHAINAYLVSAYGKNDVL 84 (149)
Q Consensus 13 ~~~~~l~~~i~~~e~~~~~~v~l~~~~~~~~~~~--------~~nP~g~VP~L~d~g~~l~ES~aI~~YL~~~~~~~~~L 84 (149)
.+.+|+..+.+|++|+. +.++ ++.+ +|+ ++||+|+||+|++||.+|+||.||++||+++|+ +
T Consensus 16 ~~~vrl~L~~~gi~ye~-~~~~----~~~~-~~~~~~~~~~~~~nP~g~vP~L~~~~~~l~eS~AI~~YLa~~~~----~ 85 (205)
T PTZ00057 16 AELIRLIFAYLGIEYTD-KRFG----ENGD-AFIEFKNFKKEKDTPFEQVPILEMDNIIFAQSQAIVRYLSKKYK----I 85 (205)
T ss_pred hHHHHHHHHHcCCCeEE-Eecc----ccch-HHHHHHhccccCCCCCCCCCEEEECCEEEecHHHHHHHHHHHcC----C
Confidence 56889999999999999 7552 2222 343 489999999999999999999999999999997 4
Q ss_pred CCCCHHHHHHHHHHHhHHhc-ccccccccceeeceeeccCccchhchhhHHHHHHHHHHhHc
Q psy13751 85 YPKDSKDRALVDQRLYFDAG-EIFPTIKQIAVSPCLLVRTHIQGVSTHGLKDCILTLARYFL 145 (149)
Q Consensus 85 ~p~~~~~~a~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~~~ 145 (149)
.+.+..+ ++..|+.+... .+...+... ..+.. ...+.....+.+.+..||+.+-
T Consensus 86 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~l~~le~~L~ 140 (205)
T PTZ00057 86 CGESELN--EFYADMIFCGVQDIHYKFNNT----NLFKQ-NETTFLNEELPKWSGYFENILK 140 (205)
T ss_pred CCCCHHH--HHHHHHHHHHHHHHHHHHhhh----HHHHH-HHHHHHHHHHHHHHHHHHHHHH
Confidence 4555444 44445544431 222211111 00111 1123345677888888888764
No 36
>PRK10387 glutaredoxin 2; Provisional
Probab=99.49 E-value=1.1e-13 Score=102.92 Aligned_cols=89 Identities=16% Similarity=0.204 Sum_probs=67.7
Q ss_pred HHHHHHHHHHhcccccccEEEecCCCCCCChhHHhhCCCCCcCeE-EeCCeeeecHHHHHHHHHHHhCCCCCCCCCCHHH
Q psy13751 13 KEIAELKEEIRKKEMEISVLVTFAPGETLDTAFLKQNPRRSLPAL-VDGDLLICDSHAINAYLVSAYGKNDVLYPKDSKD 91 (149)
Q Consensus 13 ~~~~~l~~~i~~~e~~~~~~v~l~~~~~~~~~~~~~nP~g~VP~L-~d~g~~l~ES~aI~~YL~~~~~~~~~L~p~~~~~ 91 (149)
...+++..+..|++|++ +.++. +++..+ .++||.|+||+| .++|.+|+||.||++||+++|+. + +++ + .+
T Consensus 12 ~~kv~~~L~~~gi~y~~-~~~~~--~~~~~~--~~~~p~~~VPvL~~~~g~~l~eS~aI~~yL~~~~~~-~-~l~-~-~~ 82 (210)
T PRK10387 12 CVKARMIFGLKNIPVEL-IVLAN--DDEATP--IRMIGQKQVPILQKDDGSYMPESLDIVHYIDELDGK-P-LLT-G-KR 82 (210)
T ss_pred HHHHHHHHHHcCCCeEE-EEcCC--CchhhH--HHhcCCcccceEEecCCeEecCHHHHHHHHHHhCCC-c-cCC-C-cc
Confidence 45677788888888888 66643 333322 679999999999 58899999999999999999985 3 343 2 25
Q ss_pred HHHHHHHHhHHhccccccc
Q psy13751 92 RALVDQRLYFDAGEIFPTI 110 (149)
Q Consensus 92 ~a~~~~~l~~~~~~~~~~~ 110 (149)
++.+++|+.+....+...+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~ 101 (210)
T PRK10387 83 SPAIEEWLRKVFGYLNKLL 101 (210)
T ss_pred cHHHHHHHHHHHHHhhcch
Confidence 7889999998876665544
No 37
>KOG1695|consensus
Probab=99.49 E-value=2e-13 Score=101.99 Aligned_cols=124 Identities=17% Similarity=0.084 Sum_probs=94.1
Q ss_pred HHHHHHHHHHhcccccccEEEecCCCCCCChhHHhhCCCCCcCeEEeCCeeeecHHHHHHHHHHHhCCCCCCCCCCHHHH
Q psy13751 13 KEIAELKEEIRKKEMEISVLVTFAPGETLDTAFLKQNPRRSLPALVDGDLLICDSHAINAYLVSAYGKNDVLYPKDSKDR 92 (149)
Q Consensus 13 ~~~~~l~~~i~~~e~~~~~~v~l~~~~~~~~~~~~~nP~g~VP~L~d~g~~l~ES~aI~~YL~~~~~~~~~L~p~~~~~~ 92 (149)
-++.|+..+.++++|+. +.+..... ++..+...|+|+||+|..||..|.+|.||++||+++|+ |.|.++.+.
T Consensus 15 ae~iR~lf~~a~v~fEd-~r~~~~~~---w~~~K~~~pfgqlP~l~vDg~~i~QS~AI~RyLArk~g----l~Gkt~~E~ 86 (206)
T KOG1695|consen 15 AEPIRLLFAYAGVSFED-KRITMEDA---WEELKDKMPFGQLPVLEVDGKKLVQSRAILRYLARKFG----LAGKTEEEE 86 (206)
T ss_pred HHHHHHHHHhcCCCcce-eeeccccc---hhhhcccCCCCCCCEEeECCEeeccHHHHHHHHHHHhC----cCCCCHHHH
Confidence 47899999999999999 87776542 55666679999999999889999999999999999998 999999999
Q ss_pred HHHHHHHhHHhcccccccccceeeceeecc-Cccch-hchhhHHHHHHHHHHhHc
Q psy13751 93 ALVDQRLYFDAGEIFPTIKQIAVSPCLLVR-THIQG-VSTHGLKDCILTLARYFL 145 (149)
Q Consensus 93 a~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~l~~~l~~le~~~~ 145 (149)
++++...+-+.+.....+... +.....+. +...+ ....+.+..+..+++.+.
T Consensus 87 a~vD~i~d~~~D~~~~~~~~~-~~~~~~g~~~~~~~~~~~Pa~~~~~~~~~~~L~ 140 (206)
T KOG1695|consen 87 AWVDMIVDQFKDFRWEIFRQP-YTAPEAGKSEEELDKLYLPAKPKYFKILEKILK 140 (206)
T ss_pred HHHHHHHHhhhhHHHHHHHHh-hhhhhhccchhhhhhhhccchHHHHHHHHHHHH
Confidence 999988887665555544444 33222222 22222 556677777777777764
No 38
>cd03076 GST_N_Pi GST_N family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an increase in JNK activity, thereby promoting apoptosis. GSTP1 is expressed in various tumors and is the predominant GST in a w
Probab=99.48 E-value=6.3e-14 Score=88.31 Aligned_cols=60 Identities=27% Similarity=0.218 Sum_probs=52.1
Q ss_pred HHHHHHHHHHhcccccccEEEecCCCCCCChhHHhhCCCCCcCeEEeCCeeeecHHHHHHHHHH
Q psy13751 13 KEIAELKEEIRKKEMEISVLVTFAPGETLDTAFLKQNPRRSLPALVDGDLLICDSHAINAYLVS 76 (149)
Q Consensus 13 ~~~~~l~~~i~~~e~~~~~~v~l~~~~~~~~~~~~~nP~g~VP~L~d~g~~l~ES~aI~~YL~~ 76 (149)
-+.+|+.....|++|+. +.++. ++..++|+++||+|+||+|+++|..|+||.||++||++
T Consensus 13 ~~~v~~~L~~~~i~~e~-~~v~~---~~~~~~~~~~~p~~~vP~l~~~~~~l~es~aI~~yL~~ 72 (73)
T cd03076 13 AEAIRLLLADQGISWEE-ERVTY---EEWQESLKPKMLFGQLPCFKDGDLTLVQSNAILRHLGR 72 (73)
T ss_pred HHHHHHHHHHcCCCCEE-EEecH---HHhhhhhhccCCCCCCCEEEECCEEEEcHHHHHHHHhc
Confidence 45778888888999999 88876 23456899999999999999999999999999999975
No 39
>cd03058 GST_N_Tau GST_N family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropionate herbicides. In addition, Tau GSTs play important roles in intracellular signalling, biosynthesis of anthocyanin,
Probab=99.48 E-value=2.2e-13 Score=85.71 Aligned_cols=64 Identities=20% Similarity=0.298 Sum_probs=54.4
Q ss_pred chHHHHHHHHHHhcccccccEEEecCCCCCCChhHHhhCCC-CCcCeEEeCCeeeecHHHHHHHHHHHh
Q psy13751 11 QDKEIAELKEEIRKKEMEISVLVTFAPGETLDTAFLKQNPR-RSLPALVDGDLLICDSHAINAYLVSAY 78 (149)
Q Consensus 11 ~~~~~~~l~~~i~~~e~~~~~~v~l~~~~~~~~~~~~~nP~-g~VP~L~d~g~~l~ES~aI~~YL~~~~ 78 (149)
...+.+|+..+..|++|+. +.++.. ++.++|+++||. |+||+|+++|..++||.||++||++++
T Consensus 10 p~~~~v~~~l~~~gl~~~~-~~~~~~---~~~~~~~~~~p~~~~vP~l~~~~~~l~eS~aI~~yL~~~~ 74 (74)
T cd03058 10 PFVLRVRIALALKGVPYEY-VEEDLG---NKSELLLASNPVHKKIPVLLHNGKPICESLIIVEYIDEAW 74 (74)
T ss_pred chHHHHHHHHHHcCCCCEE-EEeCcc---cCCHHHHHhCCCCCCCCEEEECCEEeehHHHHHHHHHhhC
Confidence 3456777888888999999 776653 567899999995 999999999999999999999999864
No 40
>cd03041 GST_N_2GST_N GST_N family, 2 repeats of the N-terminal domain of soluble GSTs (2 GST_N) subfamily; composed of uncharacterized proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.47 E-value=7e-14 Score=88.96 Aligned_cols=63 Identities=19% Similarity=0.275 Sum_probs=48.9
Q ss_pred HHHHHHHHHHhcccccccEEEecCCCCCCChhHHhhCCCCCcCeEEe--CCeeeecHHHHHHHHHHHh
Q psy13751 13 KEIAELKEEIRKKEMEISVLVTFAPGETLDTAFLKQNPRRSLPALVD--GDLLICDSHAINAYLVSAY 78 (149)
Q Consensus 13 ~~~~~l~~~i~~~e~~~~~~v~l~~~~~~~~~~~~~nP~g~VP~L~d--~g~~l~ES~aI~~YL~~~~ 78 (149)
.+.+++.....|++|+. +.+ ..+++..++|+++||.|+||+|++ +|..|+||.+|++||+++|
T Consensus 13 ~~kv~~~L~~~gi~y~~-~~v--~~~~~~~~~~~~~~p~~~vP~l~~~~~~~~l~es~~I~~yL~~~~ 77 (77)
T cd03041 13 CRLVREVLTELELDVIL-YPC--PKGSPKRDKFLEKGGKVQVPYLVDPNTGVQMFESADIVKYLFKTY 77 (77)
T ss_pred HHHHHHHHHHcCCcEEE-EEC--CCChHHHHHHHHhCCCCcccEEEeCCCCeEEEcHHHHHHHHHHhC
Confidence 34555556666777776 444 455556789999999999999986 4689999999999999875
No 41
>TIGR02182 GRXB Glutaredoxin, GrxB family. This model includes the highly abundant E. coli GrxB (Grx2) glutaredoxin which is notably longer than either GrxA or GrxC. Unlike the other two E. coli glutaredoxins, GrxB appears to be unable to reduce ribonucleotide reductase, and may have more to do with resistance to redox stress.
Probab=99.47 E-value=5.2e-13 Score=99.95 Aligned_cols=91 Identities=15% Similarity=0.069 Sum_probs=68.2
Q ss_pred CchHHHHHHHHHHhcccccccEEEecCCCCCCChhHHhhCCCCCcCeEE-eCCeeeecHHHHHHHHHHHhCCCCCCCCCC
Q psy13751 10 NQDKEIAELKEEIRKKEMEISVLVTFAPGETLDTAFLKQNPRRSLPALV-DGDLLICDSHAINAYLVSAYGKNDVLYPKD 88 (149)
Q Consensus 10 ~~~~~~~~l~~~i~~~e~~~~~~v~l~~~~~~~~~~~~~nP~g~VP~L~-d~g~~l~ES~aI~~YL~~~~~~~~~L~p~~ 88 (149)
|...+.+|+.....|++|+. +.+ ..+++. ...++||.|+||+|+ ++|..|+||.+|++||+++|+. +.+.|.
T Consensus 8 sp~~~kvr~~L~~~gl~~e~-~~~--~~~~~~--~~~~~np~g~vP~l~~~~g~~l~es~~I~~yL~~~~~~-~~~~~~- 80 (209)
T TIGR02182 8 CPFCVRARMIFGLKNIPVEK-HVL--LNDDEE--TPIRMIGAKQVPILQKDDGRAMPESLDIVAYFDKLDGE-PLLTGK- 80 (209)
T ss_pred CChHHHHHHHHHHcCCCeEE-EEC--CCCcch--hHHHhcCCCCcceEEeeCCeEeccHHHHHHHHHHhCCC-ccCCCC-
Confidence 45567888888888999888 544 333333 348999999999998 8899999999999999999985 333332
Q ss_pred HHHHHHHHHHHhHHhcccccc
Q psy13751 89 SKDRALVDQRLYFDAGEIFPT 109 (149)
Q Consensus 89 ~~~~a~~~~~l~~~~~~~~~~ 109 (149)
.++++.+|+.+....+...
T Consensus 81 --~~~~~~~~~~~~~~~~~~~ 99 (209)
T TIGR02182 81 --VSPEIEAWLRKVTGYANKL 99 (209)
T ss_pred --ChHHHHHHHHHHHHHhhhh
Confidence 4667788887766555443
No 42
>cd03038 GST_N_etherase_LigE GST_N family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF.
Probab=99.47 E-value=1.3e-13 Score=88.95 Aligned_cols=65 Identities=28% Similarity=0.294 Sum_probs=55.0
Q ss_pred HHHHHHHHHHhcccccccEEEecCCCCCCChhHHhhCCCCCcCeEEeC-CeeeecHHHHHHHHHHHhC
Q psy13751 13 KEIAELKEEIRKKEMEISVLVTFAPGETLDTAFLKQNPRRSLPALVDG-DLLICDSHAINAYLVSAYG 79 (149)
Q Consensus 13 ~~~~~l~~~i~~~e~~~~~~v~l~~~~~~~~~~~~~nP~g~VP~L~d~-g~~l~ES~aI~~YL~~~~~ 79 (149)
...+|+..+..+++|+. +.++...+.+..+++ ++||.|+||+|+++ |..|+||.||++||+++|+
T Consensus 19 ~~kv~~~L~~~~i~~~~-~~~~~~~~~~~~~~~-~~~p~~~vP~L~~~~~~~l~eS~aI~~yL~~~~p 84 (84)
T cd03038 19 VWKTRLALNHKGLEYKT-VPVEFPDIPPILGEL-TSGGFYTVPVIVDGSGEVIGDSFAIAEYLEEAYP 84 (84)
T ss_pred hHHHHHHHHhCCCCCeE-EEecCCCcccccccc-cCCCCceeCeEEECCCCEEeCHHHHHHHHHHhCc
Confidence 45678888888999999 888876554444556 89999999999998 8999999999999999875
No 43
>cd03051 GST_N_GTT2_like GST_N family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensitivity to heat shock.
Probab=99.46 E-value=2.4e-13 Score=84.90 Aligned_cols=63 Identities=29% Similarity=0.423 Sum_probs=55.2
Q ss_pred hHHHHHHHHHHhcccccccEEEecCCCCCCChhHHhhCCCCCcCeEE-eCCeeeecHHHHHHHHH
Q psy13751 12 DKEIAELKEEIRKKEMEISVLVTFAPGETLDTAFLKQNPRRSLPALV-DGDLLICDSHAINAYLV 75 (149)
Q Consensus 12 ~~~~~~l~~~i~~~e~~~~~~v~l~~~~~~~~~~~~~nP~g~VP~L~-d~g~~l~ES~aI~~YL~ 75 (149)
.-+.+++.....+++|+. +.++...++++.++|.++||.|+||+|+ ++|..|+||.||++||+
T Consensus 11 ~~~~~~~~L~~~~l~~~~-~~v~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~l~es~aI~~yLe 74 (74)
T cd03051 11 NPRRVRIFLAEKGIDVPL-VTVDLAAGEQRSPEFLAKNPAGTVPVLELDDGTVITESVAICRYLE 74 (74)
T ss_pred chHHHHHHHHHcCCCceE-EEeecccCccCCHHHHhhCCCCCCCEEEeCCCCEEecHHHHHHHhC
Confidence 356677888888999999 8999877777789999999999999998 57889999999999984
No 44
>cd03039 GST_N_Sigma_like GST_N family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition of platelet aggregation, bronchoconstriction, vasodilation and mediation of allergy and inflammation. Other class Sigma
Probab=99.42 E-value=2.7e-13 Score=84.92 Aligned_cols=61 Identities=25% Similarity=0.157 Sum_probs=52.0
Q ss_pred HHHHHHHHHHhcccccccEEEecCCCCCCChhHHhhCCCCCcCeEEeCCeeeecHHHHHHHHHH
Q psy13751 13 KEIAELKEEIRKKEMEISVLVTFAPGETLDTAFLKQNPRRSLPALVDGDLLICDSHAINAYLVS 76 (149)
Q Consensus 13 ~~~~~l~~~i~~~e~~~~~~v~l~~~~~~~~~~~~~nP~g~VP~L~d~g~~l~ES~aI~~YL~~ 76 (149)
-+.+|+..+..|++|+. +.++... ...++|.++||+|+||+|+++|..|+||.||++||++
T Consensus 12 ~~~v~~~l~~~gi~~e~-~~~~~~~--~~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~yL~~ 72 (72)
T cd03039 12 GEPIRLLLADAGVEYED-VRITYEE--WPELDLKPTLPFGQLPVLEIDGKKLTQSNAILRYLAR 72 (72)
T ss_pred HHHHHHHHHHCCCCcEE-EEeCHHH--hhhhhhccCCcCCCCCEEEECCEEEEecHHHHHHhhC
Confidence 36788888999999999 8887643 2335699999999999999999999999999999973
No 45
>cd03060 GST_N_Omega_like GST_N family, Omega-like subfamily; composed of uncharacterized proteins with similarity to class Omega GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. Like Omega enzymes, proteins in this subfamily contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a r
Probab=99.38 E-value=1.6e-12 Score=81.31 Aligned_cols=57 Identities=21% Similarity=0.265 Sum_probs=48.5
Q ss_pred HHHHHHHHHhcccccccEEEecCCCCCCChhHHhhCCCCCcCeEEeC-CeeeecHHHHHHHH
Q psy13751 14 EIAELKEEIRKKEMEISVLVTFAPGETLDTAFLKQNPRRSLPALVDG-DLLICDSHAINAYL 74 (149)
Q Consensus 14 ~~~~l~~~i~~~e~~~~~~v~l~~~~~~~~~~~~~nP~g~VP~L~d~-g~~l~ES~aI~~YL 74 (149)
.-+++..+.+|++|+. +.++.. ++.++|+++||.|+||+|+++ |..|+||.||++|+
T Consensus 13 ~rv~~~L~~~gl~~e~-~~v~~~---~~~~~~~~~np~~~vP~L~~~~g~~l~eS~aI~~y~ 70 (71)
T cd03060 13 MRARMALLLAGITVEL-REVELK---NKPAEMLAASPKGTVPVLVLGNGTVIEESLDIMRWA 70 (71)
T ss_pred HHHHHHHHHcCCCcEE-EEeCCC---CCCHHHHHHCCCCCCCEEEECCCcEEecHHHHHHhh
Confidence 4457777778999998 888874 346899999999999999974 89999999999996
No 46
>cd03077 GST_N_Alpha GST_N family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Alpha subfamily is composed of eukaryotic GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GSTA3-3 catalyzes the isomerization of intermediates in steroid hormone biosynthesis. GSTA4-4 preferentially catalyzes the
Probab=99.38 E-value=2.1e-12 Score=82.63 Aligned_cols=61 Identities=16% Similarity=0.164 Sum_probs=50.2
Q ss_pred hHHHHHHHHHHhcccccccEEEecCCCCCCChhHHhhC-----CCCCcCeEEeCCeeeecHHHHHHHHHHHhC
Q psy13751 12 DKEIAELKEEIRKKEMEISVLVTFAPGETLDTAFLKQN-----PRRSLPALVDGDLLICDSHAINAYLVSAYG 79 (149)
Q Consensus 12 ~~~~~~l~~~i~~~e~~~~~~v~l~~~~~~~~~~~~~n-----P~g~VP~L~d~g~~l~ES~aI~~YL~~~~~ 79 (149)
..+..++..+..|++|+. +.++.. ++|.+.| |+|+||+|++||.+|+||.||++||+++|+
T Consensus 12 ~~~~v~~~l~~~gi~~e~-~~v~~~------~~~~~~~~~~~~~~g~vP~L~~~g~~l~ES~AI~~YL~~~~~ 77 (79)
T cd03077 12 RMESIRWLLAAAGVEFEE-KFIESA------EDLEKLKKDGSLMFQQVPMVEIDGMKLVQTRAILNYIAGKYN 77 (79)
T ss_pred hHHHHHHHHHHcCCCcEE-EEeccH------HHHHhhccccCCCCCCCCEEEECCEEEeeHHHHHHHHHHHcC
Confidence 345778888888999999 888752 3444444 599999999999999999999999999986
No 47
>KOG4420|consensus
Probab=99.37 E-value=4.9e-13 Score=101.75 Aligned_cols=77 Identities=27% Similarity=0.442 Sum_probs=69.0
Q ss_pred cccCchHHHHHHHHHHhcccccccEEEecCCCCCCChhHHhhCCCCCcCeEEeCCeeeecHHHHHHHHHHHhCCCCCCCC
Q psy13751 7 KFDNQDKEIAELKEEIRKKEMEISVLVTFAPGETLDTAFLKQNPRRSLPALVDGDLLICDSHAINAYLVSAYGKNDVLYP 86 (149)
Q Consensus 7 ~~~~~~~~~~~l~~~i~~~e~~~~~~v~l~~~~~~~~~~~~~nP~g~VP~L~d~g~~l~ES~aI~~YL~~~~~~~~~L~p 86 (149)
.|+||-+ ||...-+|+.|+- ..|++..|+|..+||..+||.|.||||++|..+|.++.-|+.|+.++|-.+..|.|
T Consensus 35 sf~sQkV---rlvi~EK~id~~~-y~V~l~~geh~epwFmrlNp~gevPVl~~g~~II~d~tqIIdYvErtf~ger~l~p 110 (325)
T KOG4420|consen 35 SFSSQKV---RLVIAEKGIDCEE-YDVSLPQGEHKEPWFMRLNPGGEVPVLIHGDNIISDYTQIIDYVERTFTGERVLMP 110 (325)
T ss_pred cccccee---eeehhhcccccce-eeccCccccccCchheecCCCCCCceEecCCeecccHHHHHHHHHHhhcccccccc
Confidence 4788844 5566678889988 99999999999999999999999999999999999999999999999987677999
Q ss_pred C
Q psy13751 87 K 87 (149)
Q Consensus 87 ~ 87 (149)
.
T Consensus 111 e 111 (325)
T KOG4420|consen 111 E 111 (325)
T ss_pred c
Confidence 3
No 48
>cd03049 GST_N_3 GST_N family, unknown subfamily 3; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.32 E-value=4.4e-12 Score=79.51 Aligned_cols=59 Identities=31% Similarity=0.367 Sum_probs=49.1
Q ss_pred HHHHHHHHHH--hcccccccEEEecCCCCCCChhHHhhCCCCCcCeEE-eCCeeeecHHHHHHHHH
Q psy13751 13 KEIAELKEEI--RKKEMEISVLVTFAPGETLDTAFLKQNPRRSLPALV-DGDLLICDSHAINAYLV 75 (149)
Q Consensus 13 ~~~~~l~~~i--~~~e~~~~~~v~l~~~~~~~~~~~~~nP~g~VP~L~-d~g~~l~ES~aI~~YL~ 75 (149)
-..+|+..+. .+++|+. +.++. .++.++|+++||.|+||+|+ ++|..++||.||++||+
T Consensus 12 ~~~~~~~l~~~~~~i~~~~-~~~~~---~~~~~~~~~~~p~~~vP~l~~~~g~~l~es~aI~~yLe 73 (73)
T cd03049 12 VRKVRVAAHETGLGDDVEL-VLVNP---WSDDESLLAVNPLGKIPALVLDDGEALFDSRVICEYLD 73 (73)
T ss_pred HHHHHHHHHHhCCCCCcEE-EEcCc---ccCChHHHHhCCCCCCCEEEECCCCEEECHHHHHhhhC
Confidence 4566777777 7788888 77764 35678999999999999998 58899999999999984
No 49
>cd03080 GST_N_Metaxin_like GST_N family, Metaxin subfamily, Metaxin-like proteins; a heterogenous group of proteins, predominantly uncharacterized, with similarity to metaxins and GSTs. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. One characterized member of this subgroup is a novel GST from Rhodococcus with toluene o-monooxygenase and gamma-glutamylcysteine synthetase activities. Also members are the cadmium-inducible lysosomal protein CDR-1 and its homologs from C. elegans, and the failed axon connections (fax) protein from Drosophila. CDR-1 is an integral membrane protein that functions to protect against cadmium toxicity and may also have a role in osmoregulation to maintain salt balance in C. ele
Probab=99.29 E-value=9.2e-12 Score=78.69 Aligned_cols=56 Identities=23% Similarity=0.162 Sum_probs=47.2
Q ss_pred HHHHHHHHHHhcccccccEEEecCCCCCCChhHHhhCCCCCcCeEEeCCeeeecHHHHHHHHHHHhC
Q psy13751 13 KEIAELKEEIRKKEMEISVLVTFAPGETLDTAFLKQNPRRSLPALVDGDLLICDSHAINAYLVSAYG 79 (149)
Q Consensus 13 ~~~~~l~~~i~~~e~~~~~~v~l~~~~~~~~~~~~~nP~g~VP~L~d~g~~l~ES~aI~~YL~~~~~ 79 (149)
...+++..+.+|++|+. +.++. .++||.|+||+|+++|.+|+||.+|++||+++|+
T Consensus 20 ~~~v~~~L~~~gi~~~~-~~~~~----------~~~~p~g~vPvl~~~g~~l~eS~~I~~yL~~~~~ 75 (75)
T cd03080 20 CLKVETFLRMAGIPYEN-KFGGL----------AKRSPKGKLPFIELNGEKIADSELIIDHLEEKYG 75 (75)
T ss_pred HHHHHHHHHHCCCCcEE-eecCc----------ccCCCCCCCCEEEECCEEEcCHHHHHHHHHHHcC
Confidence 45567777888888888 65553 2689999999999999999999999999999874
No 50
>cd03055 GST_N_Omega GST_N family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a redox active residue capable of reducing GSH mixed disulfides in a monothiol mechanism. Polymorphisms of the class Omega
Probab=99.25 E-value=9e-12 Score=81.36 Aligned_cols=59 Identities=24% Similarity=0.325 Sum_probs=49.6
Q ss_pred HHHHHHHHHHhcccccccEEEecCCCCCCChhHHhhCCCCCcCeEEeC-CeeeecHHHHHHHHH
Q psy13751 13 KEIAELKEEIRKKEMEISVLVTFAPGETLDTAFLKQNPRRSLPALVDG-DLLICDSHAINAYLV 75 (149)
Q Consensus 13 ~~~~~l~~~i~~~e~~~~~~v~l~~~~~~~~~~~~~nP~g~VP~L~d~-g~~l~ES~aI~~YL~ 75 (149)
-+.+++..+..|++|+. +.++.. +..++|+++||.|+||+|+++ |..|+||.||++||+
T Consensus 30 ~~kv~~~L~~~gl~~~~-~~v~~~---~~~~~~~~~np~~~vPvL~~~~g~~l~eS~aI~~yLe 89 (89)
T cd03055 30 AQRARLVLAAKNIPHEV-ININLK---DKPDWFLEKNPQGKVPALEIDEGKVVYESLIICEYLD 89 (89)
T ss_pred HHHHHHHHHHcCCCCeE-EEeCCC---CCcHHHHhhCCCCCcCEEEECCCCEEECHHHHHHhhC
Confidence 45677778888888888 777764 345789999999999999976 899999999999984
No 51
>cd03037 GST_N_GRX2 GST_N family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD, compared with other GRXs which are 9-12kD in size. GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=99.19 E-value=6.1e-11 Score=73.90 Aligned_cols=60 Identities=12% Similarity=0.192 Sum_probs=48.7
Q ss_pred hHHHHHHHHHHhcccccccEEEecCCCCCCChhHHhhCCCCCcCeEEeC-CeeeecHHHHHHHHHH
Q psy13751 12 DKEIAELKEEIRKKEMEISVLVTFAPGETLDTAFLKQNPRRSLPALVDG-DLLICDSHAINAYLVS 76 (149)
Q Consensus 12 ~~~~~~l~~~i~~~e~~~~~~v~l~~~~~~~~~~~~~nP~g~VP~L~d~-g~~l~ES~aI~~YL~~ 76 (149)
.-+.+|+....+|++|+. +.++.. . ....++.||.|+||+|+++ |..++||.||++||++
T Consensus 11 ~~~rvr~~L~~~gl~~~~-~~~~~~--~--~~~~~~~~~~~~vP~L~~~~~~~l~es~aI~~yL~~ 71 (71)
T cd03037 11 FCVKARMIAGLKNIPVEQ-IILQND--D--EATPIRMIGAKQVPILEKDDGSFMAESLDIVAFIDE 71 (71)
T ss_pred HhHHHHHHHHHcCCCeEE-EECCCC--c--hHHHHHhcCCCccCEEEeCCCeEeehHHHHHHHHhC
Confidence 357889999999999998 766532 2 2345688999999999875 8999999999999974
No 52
>cd00570 GST_N_family Glutathione S-transferase (GST) family, N-terminal domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK subfamily, a member of the DsbA family). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical doma
Probab=99.09 E-value=3.7e-10 Score=68.57 Aligned_cols=60 Identities=35% Similarity=0.481 Sum_probs=49.8
Q ss_pred HHHHHHHHHHhcccccccEEEecCCCCCCChhHHhhCCCCCcCeEEeCCeeeecHHHHHHHHH
Q psy13751 13 KEIAELKEEIRKKEMEISVLVTFAPGETLDTAFLKQNPRRSLPALVDGDLLICDSHAINAYLV 75 (149)
Q Consensus 13 ~~~~~l~~~i~~~e~~~~~~v~l~~~~~~~~~~~~~nP~g~VP~L~d~g~~l~ES~aI~~YL~ 75 (149)
-+.++......+++|+. +.++..... ..++.+.+|.+++|+|+++|..++||.+|++||+
T Consensus 12 ~~~~~~~l~~~~i~~~~-~~~~~~~~~--~~~~~~~~~~~~~P~l~~~~~~~~es~~I~~yl~ 71 (71)
T cd00570 12 SLRVRLALEEKGLPYEL-VPVDLGEGE--QEEFLALNPLGKVPVLEDGGLVLTESLAILEYLA 71 (71)
T ss_pred HHHHHHHHHHcCCCcEE-EEeCCCCCC--CHHHHhcCCCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 45677888888999999 777754332 2268999999999999999999999999999984
No 53
>cd03054 GST_N_Metaxin GST_N family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities.
Probab=99.08 E-value=3.3e-10 Score=70.78 Aligned_cols=54 Identities=24% Similarity=0.180 Sum_probs=45.0
Q ss_pred HHHHHHHHHHhcccccccEEEecCCCCCCChhHHhhCCCCCcCeEEeCCeeeecHHHHHHHHHHH
Q psy13751 13 KEIAELKEEIRKKEMEISVLVTFAPGETLDTAFLKQNPRRSLPALVDGDLLICDSHAINAYLVSA 77 (149)
Q Consensus 13 ~~~~~l~~~i~~~e~~~~~~v~l~~~~~~~~~~~~~nP~g~VP~L~d~g~~l~ES~aI~~YL~~~ 77 (149)
-..+++..+.+|++|++ +.++.. .+||.|+||+|+++|..++||.+|++||+++
T Consensus 19 ~~~v~~~L~~~~i~~~~-~~~~~~----------~~~p~g~vP~l~~~g~~l~es~~I~~yL~~~ 72 (72)
T cd03054 19 CLKVETYLRMAGIPYEV-VFSSNP----------WRSPTGKLPFLELNGEKIADSEKIIEYLKKK 72 (72)
T ss_pred HHHHHHHHHhCCCceEE-EecCCc----------ccCCCcccCEEEECCEEEcCHHHHHHHHhhC
Confidence 45577777778888888 766642 1899999999999999999999999999874
No 54
>PLN02907 glutamate-tRNA ligase
Probab=99.08 E-value=5.4e-10 Score=97.00 Aligned_cols=76 Identities=13% Similarity=0.164 Sum_probs=61.9
Q ss_pred chHHHHHHHHHHhcccccccEEEecCCCCCCChhHHhhCCCCCcCeEE-eCCeeeecHHHHHHHHHHHhCCCCCCCCCCH
Q psy13751 11 QDKEIAELKEEIRKKEMEISVLVTFAPGETLDTAFLKQNPRRSLPALV-DGDLLICDSHAINAYLVSAYGKNDVLYPKDS 89 (149)
Q Consensus 11 ~~~~~~~l~~~i~~~e~~~~~~v~l~~~~~~~~~~~~~nP~g~VP~L~-d~g~~l~ES~aI~~YL~~~~~~~~~L~p~~~ 89 (149)
.+.. +.+..+..+++|++ +. .||+|+||+|+ ++|..|+||.||++||++.++. ..|+|.++
T Consensus 12 ~~~~-v~~~L~~lgv~~e~-~~---------------~~p~GkVPvLv~ddG~~L~ES~AIl~YLa~~~p~-~~L~p~d~ 73 (722)
T PLN02907 12 PPLA-VIAAAKVAGVPLTI-DP---------------SLKSGSAPTLLFSSGEKLTGTNVLLRYIARSASL-PGFYGQDA 73 (722)
T ss_pred ChHH-HHHHHHHcCCCcEE-ee---------------cCCCCCCcEEEECCCCEEECHHHHHHHHHHhCCC-cCCCCCCH
Confidence 3444 34446667777777 32 26999999998 5889999999999999999976 56999999
Q ss_pred HHHHHHHHHHhHHhc
Q psy13751 90 KDRALVDQRLYFDAG 104 (149)
Q Consensus 90 ~~~a~~~~~l~~~~~ 104 (149)
.+++++++|+.|...
T Consensus 74 ~erAqV~qWL~~~~~ 88 (722)
T PLN02907 74 FESSQVDEWLDYAPT 88 (722)
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999998764
No 55
>cd03040 GST_N_mPGES2 GST_N family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated, and a C-terminal soluble domain with a GST-like structure.
Probab=99.05 E-value=2.3e-10 Score=72.28 Aligned_cols=62 Identities=16% Similarity=0.045 Sum_probs=48.0
Q ss_pred chHHHHHHHHHHhcccccccEEEecCCCCCCChhHHhhCCCCCcCeEEeC----CeeeecHHHHHHHHHHHh
Q psy13751 11 QDKEIAELKEEIRKKEMEISVLVTFAPGETLDTAFLKQNPRRSLPALVDG----DLLICDSHAINAYLVSAY 78 (149)
Q Consensus 11 ~~~~~~~l~~~i~~~e~~~~~~v~l~~~~~~~~~~~~~nP~g~VP~L~d~----g~~l~ES~aI~~YL~~~~ 78 (149)
-..+.+++..+..|++|+. +.++... .++ ++.||.|+||+|+++ |.+|+||.+|++||+++.
T Consensus 11 p~c~kv~~~L~~~gi~y~~-~~~~~~~----~~~-~~~~~~~~vP~l~~~~~~~~~~l~eS~~I~~yL~~~~ 76 (77)
T cd03040 11 PFCCKVRAFLDYHGIPYEV-VEVNPVS----RKE-IKWSSYKKVPILRVESGGDGQQLVDSSVIISTLKTYL 76 (77)
T ss_pred HHHHHHHHHHHHCCCceEE-EECCchh----HHH-HHHhCCCccCEEEECCCCCccEEEcHHHHHHHHHHHc
Confidence 3457778888888888888 6655321 123 467999999999854 789999999999999864
No 56
>cd03079 GST_N_Metaxin2 GST_N family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=98.93 E-value=2.4e-09 Score=67.72 Aligned_cols=53 Identities=11% Similarity=0.167 Sum_probs=39.9
Q ss_pred HHHHHHHHhcccccccEEEecCCCCCCChhHHhhCCCCCcCeEEeCCeeeecHHHHHHHHHHH
Q psy13751 15 IAELKEEIRKKEMEISVLVTFAPGETLDTAFLKQNPRRSLPALVDGDLLICDSHAINAYLVSA 77 (149)
Q Consensus 15 ~~~l~~~i~~~e~~~~~~v~l~~~~~~~~~~~~~nP~g~VP~L~d~g~~l~ES~aI~~YL~~~ 77 (149)
..++..+.+|++|++ + +...++ ..+|.|+||+|++||.+|+||.||+.||+++
T Consensus 22 kv~~~L~elglpye~-~--~~~~~~-------~~~P~GkVP~L~~dg~vI~eS~aIl~yL~~~ 74 (74)
T cd03079 22 AVQTFLKMCNLPFNV-R--CRANAE-------FMSPSGKVPFIRVGNQIVSEFGPIVQFVEAK 74 (74)
T ss_pred HHHHHHHHcCCCcEE-E--ecCCcc-------ccCCCCcccEEEECCEEEeCHHHHHHHHhcC
Confidence 445566667888887 4 332211 1567899999999999999999999999863
No 57
>KOG1422|consensus
Probab=98.33 E-value=4e-06 Score=62.43 Aligned_cols=57 Identities=19% Similarity=0.271 Sum_probs=51.7
Q ss_pred HHHhcccccccEEEecCCCCCCChhHHhhCCCCCcCeEEeCCeeeecHHHHHHHHHHHhCC
Q psy13751 20 EEIRKKEMEISVLVTFAPGETLDTAFLKQNPRRSLPALVDGDLLICDSHAINAYLVSAYGK 80 (149)
Q Consensus 20 ~~i~~~e~~~~~~v~l~~~~~~~~~~~~~nP~g~VP~L~d~g~~l~ES~aI~~YL~~~~~~ 80 (149)
+...+..|.+ +.||+. .++++|+++.|.|++|+|..++...+||..|-++|.+++++
T Consensus 31 L~~k~~~f~v-ttVd~~---~kp~~f~~~sp~~~~P~l~~d~~~~tDs~~Ie~~Lee~l~~ 87 (221)
T KOG1422|consen 31 LELKGVPFKV-TTVDLS---RKPEWFLDISPGGKPPVLKFDEKWVTDSDKIEEFLEEKLPP 87 (221)
T ss_pred HHHcCCCceE-EEeecC---CCcHHHHhhCCCCCCCeEEeCCceeccHHHHHHHHHHhcCC
Confidence 3477889999 999985 46799999999999999999999999999999999999986
No 58
>cd03078 GST_N_Metaxin1_like GST_N family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins including Tom37 from fungi. Mammalian metaxin (or metaxin 1) and the fungal protein Tom37 are components of preprotein import complexes of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals.
Probab=97.87 E-value=6.3e-05 Score=47.24 Aligned_cols=30 Identities=30% Similarity=0.460 Sum_probs=27.6
Q ss_pred hCCCCCcCeEEeCCeeeecHHHHHHHHHHH
Q psy13751 48 QNPRRSLPALVDGDLLICDSHAINAYLVSA 77 (149)
Q Consensus 48 ~nP~g~VP~L~d~g~~l~ES~aI~~YL~~~ 77 (149)
.+|.|++|+|+++|..+.+|..|++||.++
T Consensus 43 ~sp~gkLP~l~~~~~~i~d~~~Ii~~L~~~ 72 (73)
T cd03078 43 RSPTGKLPALLTSGTKISGPEKIIEYLRKQ 72 (73)
T ss_pred CCCCCccCEEEECCEEecChHHHHHHHHHc
Confidence 468999999999999999999999999864
No 59
>COG2999 GrxB Glutaredoxin 2 [Posttranslational modification, protein turnover, chaperones]
Probab=97.61 E-value=0.00044 Score=50.59 Aligned_cols=82 Identities=18% Similarity=0.208 Sum_probs=54.2
Q ss_pred HHHHHHHhcccccccEEEecCCCCCCChhHHhhCCCCCcCeEE-eCCeeeecHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Q psy13751 16 AELKEEIRKKEMEISVLVTFAPGETLDTAFLKQNPRRSLPALV-DGDLLICDSHAINAYLVSAYGKNDVLYPKDSKDRAL 94 (149)
Q Consensus 16 ~~l~~~i~~~e~~~~~~v~l~~~~~~~~~~~~~nP~g~VP~L~-d~g~~l~ES~aI~~YL~~~~~~~~~L~p~~~~~~a~ 94 (149)
||+..-+.++++++ +...-.+ + .++ ..+=-..+||+|+ ++|..+.||..|.+|+++.++. +-|.+. -+..
T Consensus 15 armi~Gl~nipve~-~vL~nDD-e-~Tp--~rmiG~KqVPiL~Kedg~~m~ESlDIV~y~d~~~~~-~~lt~~---~~pa 85 (215)
T COG2999 15 ARMIFGLKNIPVEL-HVLLNDD-E-ETP--IRMIGQKQVPILQKEDGRAMPESLDIVHYVDELDGK-PLLTGK---VRPA 85 (215)
T ss_pred HHHHhhccCCChhh-heeccCc-c-cCh--hhhhcccccceEEccccccchhhhHHHHHHHHhcCc-hhhccC---cCHH
Confidence 67777888888888 4433222 2 221 1233467899998 7899999999999999999885 324432 2445
Q ss_pred HHHHHhHHhccc
Q psy13751 95 VDQRLYFDAGEI 106 (149)
Q Consensus 95 ~~~~l~~~~~~~ 106 (149)
++.|+.-..+..
T Consensus 86 i~~wlrkv~~y~ 97 (215)
T COG2999 86 IEAWLRKVNGYL 97 (215)
T ss_pred HHHHHHHhcchH
Confidence 567766554443
No 60
>TIGR02190 GlrX-dom Glutaredoxin-family domain. This C-terminal domain with homology to glutaredoxin is fused to an N-terminal peroxiredoxin-like domain.
Probab=96.81 E-value=0.0029 Score=39.92 Aligned_cols=51 Identities=18% Similarity=0.304 Sum_probs=38.5
Q ss_pred HHhcccccccEEEecCCCCCCChhHHhhCCCCCcCeEEeCCeeeecHHHHHHHHH
Q psy13751 21 EIRKKEMEISVLVTFAPGETLDTAFLKQNPRRSLPALVDGDLLICDSHAINAYLV 75 (149)
Q Consensus 21 ~i~~~e~~~~~~v~l~~~~~~~~~~~~~nP~g~VP~L~d~g~~l~ES~aI~~YL~ 75 (149)
.-.|++|+. + ++.. .....++...++..+||++..+|..+.++..|..||+
T Consensus 29 ~~~gi~y~~-i--di~~-~~~~~~~~~~~g~~~vP~i~i~g~~igG~~~l~~~l~ 79 (79)
T TIGR02190 29 KEKGYDFEE-I--PLGN-DARGRSLRAVTGATTVPQVFIGGKLIGGSDELEAYLA 79 (79)
T ss_pred HHcCCCcEE-E--ECCC-ChHHHHHHHHHCCCCcCeEEECCEEEcCHHHHHHHhC
Confidence 344677766 4 4433 2223567788899999999999999999999999984
No 61
>PRK10638 glutaredoxin 3; Provisional
Probab=96.44 E-value=0.0078 Score=38.24 Aligned_cols=58 Identities=10% Similarity=0.077 Sum_probs=41.9
Q ss_pred HHHHHHHHhcccccccEEEecCCCCCCChhHHhhCCCCCcCeEEeCCeeeecHHHHHHHHH
Q psy13751 15 IAELKEEIRKKEMEISVLVTFAPGETLDTAFLKQNPRRSLPALVDGDLLICDSHAINAYLV 75 (149)
Q Consensus 15 ~~~l~~~i~~~e~~~~~~v~l~~~~~~~~~~~~~nP~g~VP~L~d~g~~l~ES~aI~~YL~ 75 (149)
-++....-.+++|+. +.|+. .....+++.+++|.++||++..+|..+.....+..+-.
T Consensus 17 ~a~~~L~~~gi~y~~-~dv~~--~~~~~~~l~~~~g~~~vP~i~~~g~~igG~~~~~~~~~ 74 (83)
T PRK10638 17 RAKALLNSKGVSFQE-IPIDG--DAAKREEMIKRSGRTTVPQIFIDAQHIGGCDDLYALDA 74 (83)
T ss_pred HHHHHHHHcCCCcEE-EECCC--CHHHHHHHHHHhCCCCcCEEEECCEEEeCHHHHHHHHH
Confidence 344455556777777 55543 22235778899999999999989999998888777643
No 62
>PF10568 Tom37: Outer mitochondrial membrane transport complex protein; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=96.33 E-value=0.0052 Score=38.46 Aligned_cols=27 Identities=37% Similarity=0.628 Sum_probs=25.5
Q ss_pred hCCCCCcCeEEe-CCeeeecHHHHHHHH
Q psy13751 48 QNPRRSLPALVD-GDLLICDSHAINAYL 74 (149)
Q Consensus 48 ~nP~g~VP~L~d-~g~~l~ES~aI~~YL 74 (149)
++|.|++|+|.+ ++..+.+-..|++||
T Consensus 44 ~Sptg~LP~L~~~~~~~vsg~~~Iv~yL 71 (72)
T PF10568_consen 44 LSPTGELPALIDSGGTWVSGFRNIVEYL 71 (72)
T ss_pred cCCCCCCCEEEECCCcEEECHHHHHHhh
Confidence 679999999999 899999999999998
No 63
>KOG4244|consensus
Probab=96.15 E-value=0.025 Score=43.87 Aligned_cols=55 Identities=18% Similarity=0.153 Sum_probs=40.0
Q ss_pred HhhCCCCCcCeEEeCCeeeecHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHhHHh
Q psy13751 46 LKQNPRRSLPALVDGDLLICDSHAINAYLVSAYGKNDVLYPKDSKDRALVDQRLYFDA 103 (149)
Q Consensus 46 ~~~nP~g~VP~L~d~g~~l~ES~aI~~YL~~~~~~~~~L~p~~~~~~a~~~~~l~~~~ 103 (149)
...++.|++|-++-+|..+.+|.-|..+|.+.+.-+.+ +| +.++|+........+
T Consensus 86 ~~rSr~G~lPFIELNGe~iaDS~~I~~~L~~hf~~~~~-L~--~e~~a~s~Al~rm~d 140 (281)
T KOG4244|consen 86 KRRSRNGTLPFIELNGEHIADSDLIEDRLRKHFKIPDD-LS--AEQRAQSRALSRMAD 140 (281)
T ss_pred eeeccCCCcceEEeCCeeccccHHHHHHHHHHcCCCCC-CC--HHHHHHHHHHHHHHH
Confidence 35678999999999999999999999999998885333 43 334444444433333
No 64
>TIGR02196 GlrX_YruB Glutaredoxin-like protein, YruB-family. This glutaredoxin-like protein family contains the conserved CxxC motif and includes the Clostridium pasteurianum protein YruB which has been cloned from a rubredoxin operon. Somewhat related to NrdH, it is unknown whether this protein actually interacts with glutathione/glutathione reducatase, or, like NrdH, some other reductant system.
Probab=95.97 E-value=0.02 Score=34.46 Aligned_cols=49 Identities=20% Similarity=0.331 Sum_probs=33.5
Q ss_pred hcccccccEEEecCCCCCCChhHHhhCCCCCcCeEEeCCeee--ecHHHHHHHH
Q psy13751 23 RKKEMEISVLVTFAPGETLDTAFLKQNPRRSLPALVDGDLLI--CDSHAINAYL 74 (149)
Q Consensus 23 ~~~e~~~~~~v~l~~~~~~~~~~~~~nP~g~VP~L~d~g~~l--~ES~aI~~YL 74 (149)
.+++|.. +|........+++.+.++.+.||+++.+|..+ +++.+|..||
T Consensus 23 ~~i~~~~---vdi~~~~~~~~~~~~~~~~~~vP~~~~~~~~~~g~~~~~i~~~i 73 (74)
T TIGR02196 23 KGIAFEE---IDVEKDSAAREEVLKVLGQRGVPVIVIGHKIIVGFDPEKLDQLL 73 (74)
T ss_pred CCCeEEE---EeccCCHHHHHHHHHHhCCCcccEEEECCEEEeeCCHHHHHHHh
Confidence 3555544 45544333346688899999999999888776 6777776665
No 65
>cd02976 NrdH NrdH-redoxin (NrdH) family; NrdH is a small monomeric protein with a conserved redox active CXXC motif within a TRX fold, characterized by a glutaredoxin (GRX)-like sequence and TRX-like activity profile. In vitro, it displays protein disulfide reductase activity that is dependent on TRX reductase, not glutathione (GSH). It is part of the NrdHIEF operon, where NrdEF codes for class Ib ribonucleotide reductase (RNR-Ib), an efficient enzyme at low oxygen levels. Under these conditions when GSH is mostly conjugated to spermidine, NrdH can still function and act as a hydrogen donor for RNR-Ib. It has been suggested that the NrdHEF system may be the oldest RNR reducing system, capable of functioning in a microaerophilic environment, where GSH was not yet available. NrdH from Corynebacterium ammoniagenes can form domain-swapped dimers, although it is unknown if this happens in vivo. Domain-swapped dimerization, which results in the blocking of the TRX reductase binding site, cou
Probab=95.71 E-value=0.021 Score=34.32 Aligned_cols=40 Identities=28% Similarity=0.248 Sum_probs=27.7
Q ss_pred hcccccccEEEecCCCCCCChhHHhhCCCCCcCeEEeCCeeee
Q psy13751 23 RKKEMEISVLVTFAPGETLDTAFLKQNPRRSLPALVDGDLLIC 65 (149)
Q Consensus 23 ~~~e~~~~~~v~l~~~~~~~~~~~~~nP~g~VP~L~d~g~~l~ 65 (149)
.+++|.. . ++.......++|.++||.++||+++++|..+.
T Consensus 23 ~~i~~~~-~--~i~~~~~~~~~~~~~~~~~~vP~i~~~~~~i~ 62 (73)
T cd02976 23 RGIPFEE-V--DVDEDPEALEELKKLNGYRSVPVVVIGDEHLS 62 (73)
T ss_pred CCCCeEE-E--eCCCCHHHHHHHHHHcCCcccCEEEECCEEEe
Confidence 4666665 4 44333334467889999999999998876554
No 66
>cd03029 GRX_hybridPRX5 Glutaredoxin (GRX) family, PRX5 hybrid subfamily; composed of hybrid proteins containing peroxiredoxin (PRX) and GRX domains, which is found in some pathogenic bacteria and cyanobacteria. PRXs are thiol-specific antioxidant (TSA) proteins that confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins. PRX-GRX hybrid proteins from Haemophilus influenza and Neisseria meningitis exhibit GSH-dependent peroxidase activity. The flow of reducing equivalents in the catalytic cycle of the hybrid protein goes from NADPH - GSH reductase - GSH - GRX domain of hybrid - PRX domain of hybrid - peroxide substrate.
Probab=95.61 E-value=0.037 Score=33.94 Aligned_cols=50 Identities=12% Similarity=0.106 Sum_probs=36.3
Q ss_pred HhcccccccEEEecCCCCCCChhHHhhCCCCCcCeEEeCCeeeecHHHHHHHHH
Q psy13751 22 IRKKEMEISVLVTFAPGETLDTAFLKQNPRRSLPALVDGDLLICDSHAINAYLV 75 (149)
Q Consensus 22 i~~~e~~~~~~v~l~~~~~~~~~~~~~nP~g~VP~L~d~g~~l~ES~aI~~YL~ 75 (149)
-.+++|+. +.++ ... ....+.......+||++..+|..+.++..|..||+
T Consensus 23 ~~~i~~~~-~~v~--~~~-~~~~~~~~~g~~~vP~ifi~g~~igg~~~l~~~l~ 72 (72)
T cd03029 23 ENGISYEE-IPLG--KDI-TGRSLRAVTGAMTVPQVFIDGELIGGSDDLEKYFA 72 (72)
T ss_pred HcCCCcEE-EECC--CCh-hHHHHHHHhCCCCcCeEEECCEEEeCHHHHHHHhC
Confidence 34666666 4443 322 23456677788899999999999999999999974
No 67
>cd03189 GST_C_GTT1_like GST_C family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endopl
Probab=95.16 E-value=0.018 Score=38.50 Aligned_cols=58 Identities=19% Similarity=0.202 Sum_probs=38.4
Q ss_pred CCCHHHHHHHHHHHhHHhcccccccccceeeceeecc-----------CccchhchhhHHHHHHHHHHhH
Q psy13751 86 PKDSKDRALVDQRLYFDAGEIFPTIKQIAVSPCLLVR-----------THIQGVSTHGLKDCILTLARYF 144 (149)
Q Consensus 86 p~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~l~~~l~~le~~~ 144 (149)
|.++.+|+++++|+.|..+.+.+.+... ++...... +...+.....+.+.+..||+.+
T Consensus 2 ~~~~~~ra~~~~wl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L 70 (119)
T cd03189 2 PPDTAEYADYLYWLHFAEGSLMPPLLLK-LVLSRIGSAPPPIANKIADKVLAGFINPELKKHLDFLEDRL 70 (119)
T ss_pred CCCHHHHHHHHHHHHHHhHhhhHHHHHH-HHHhhcCCCCcchHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 5688999999999999999999886543 22211111 1122234556777888888765
No 68
>cd03196 GST_C_5 GST_C family, unknown subfamily 5; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=95.13 E-value=0.028 Score=37.88 Aligned_cols=56 Identities=5% Similarity=-0.072 Sum_probs=43.3
Q ss_pred CCHHHHHHHHHHHhHHhcccccccccceeeceeeccCccchhchhhHHHHHHHHHHhH
Q psy13751 87 KDSKDRALVDQRLYFDAGEIFPTIKQIAVSPCLLVRTHIQGVSTHGLKDCILTLARYF 144 (149)
Q Consensus 87 ~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~~ 144 (149)
.++..++++++|+.|..+.+.+.+... .+...... +..+.....+.+.+..||+.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~i~~~l~~le~~L 57 (115)
T cd03196 2 QDPAALKEMLALIAENDNEFKHHLDRY-KYADRYPE-ESEEEYRQQAEAFLKDLEARL 57 (115)
T ss_pred CchHHHHHHHHHHHHcchhhHHHHHhc-cchhhcCc-ccHHHHHHHHHHHHHHHHHHH
Confidence 468899999999999999999988776 55544333 235556778888888888876
No 69
>cd02066 GRX_family Glutaredoxin (GRX) family; composed of GRX, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known including human GRX1 and GRX2, as well as E. coli GRX1 and GRX3, which
Probab=95.04 E-value=0.078 Score=31.50 Aligned_cols=48 Identities=13% Similarity=0.115 Sum_probs=34.9
Q ss_pred HhcccccccEEEecCCCCCCChhHHhhCCCCCcCeEEeCCeeeecHHHHHH
Q psy13751 22 IRKKEMEISVLVTFAPGETLDTAFLKQNPRRSLPALVDGDLLICDSHAINA 72 (149)
Q Consensus 22 i~~~e~~~~~~v~l~~~~~~~~~~~~~nP~g~VP~L~d~g~~l~ES~aI~~ 72 (149)
-.+++|.. +|+.......+++.++++..++|++..+|..+..+..|.+
T Consensus 22 ~~~i~~~~---~di~~~~~~~~~l~~~~~~~~~P~~~~~~~~igg~~~~~~ 69 (72)
T cd02066 22 SLGIEFEE---IDILEDGELREELKELSGWPTVPQIFINGEFIGGYDDLKA 69 (72)
T ss_pred HcCCcEEE---EECCCCHHHHHHHHHHhCCCCcCEEEECCEEEecHHHHHH
Confidence 33455444 5655433345678889999999999999999999877765
No 70
>TIGR02200 GlrX_actino Glutaredoxin-like protein. This family of glutaredoxin-like proteins is limited to the Actinobacteria and contains the conserved CxxC motif.
Probab=94.31 E-value=0.052 Score=33.17 Aligned_cols=46 Identities=11% Similarity=0.131 Sum_probs=30.5
Q ss_pred HHHHhcccccccEEEecCCCCCCChhHHhhC-CCCCcCeEE-eCCeeeecH
Q psy13751 19 KEEIRKKEMEISVLVTFAPGETLDTAFLKQN-PRRSLPALV-DGDLLICDS 67 (149)
Q Consensus 19 ~~~i~~~e~~~~~~v~l~~~~~~~~~~~~~n-P~g~VP~L~-d~g~~l~ES 67 (149)
.+.-.+++|+. +|........+.+.++| +.+.||+++ ++|..++++
T Consensus 19 ~L~~~~~~~~~---idi~~~~~~~~~~~~~~~~~~~vP~i~~~~g~~l~~~ 66 (77)
T TIGR02200 19 TLDKLGAAYEW---VDIEEDEGAADRVVSVNNGNMTVPTVKFADGSFLTNP 66 (77)
T ss_pred HHHHcCCceEE---EeCcCCHhHHHHHHHHhCCCceeCEEEECCCeEecCC
Confidence 33444666655 55554444446677887 999999996 677777654
No 71
>cd03027 GRX_DEP Glutaredoxin (GRX) family, Dishevelled, Egl-10, and Pleckstrin (DEP) subfamily; composed of uncharacterized proteins containing a GRX domain and additional domains DEP and DUF547, both of which have unknown functions. GRX is a glutathione (GSH) dependent reductase containing a redox active CXXC motif in a TRX fold. It has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. By altering the redox state of target proteins, GRX is involved in many cellular functions.
Probab=94.25 E-value=0.05 Score=33.49 Aligned_cols=49 Identities=6% Similarity=-0.023 Sum_probs=33.4
Q ss_pred HHHHHHHhcccccccEEEecCCCCCCChhHHhhCCCCCcCeEEeCCeeeecH
Q psy13751 16 AELKEEIRKKEMEISVLVTFAPGETLDTAFLKQNPRRSLPALVDGDLLICDS 67 (149)
Q Consensus 16 ~~l~~~i~~~e~~~~~~v~l~~~~~~~~~~~~~nP~g~VP~L~d~g~~l~ES 67 (149)
|+..+.-.+++|+. + ++.......+++.++++.++||++..+|..+.--
T Consensus 17 a~~~L~~~gi~~~~-~--di~~~~~~~~el~~~~g~~~vP~v~i~~~~iGg~ 65 (73)
T cd03027 17 VRLFLREKGLPYVE-I--NIDIFPERKAELEERTGSSVVPQIFFNEKLVGGL 65 (73)
T ss_pred HHHHHHHCCCceEE-E--ECCCCHHHHHHHHHHhCCCCcCEEEECCEEEeCH
Confidence 34444445777766 4 5544334457899999999999998888776643
No 72
>COG0435 ECM4 Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=94.08 E-value=0.24 Score=38.96 Aligned_cols=88 Identities=17% Similarity=0.190 Sum_probs=53.7
Q ss_pred CCCcCeEEeCC---eeeecHHHHHHHHHHHhC----CCCCCCCCCHHHHHHHHHHHhHHhcccccccccceeeceeeccC
Q psy13751 51 RRSLPALVDGD---LLICDSHAINAYLVSAYG----KNDVLYPKDSKDRALVDQRLYFDAGEIFPTIKQIAVSPCLLVRT 123 (149)
Q Consensus 51 ~g~VP~L~d~g---~~l~ES~aI~~YL~~~~~----~~~~L~p~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 123 (149)
.-+||||-|.. .+=-||.-|++-+...|. ...+|+|.. -|.+++.|.+|+...+-.-+... -+....
T Consensus 127 RvTVPVLwDk~~~tIVnNES~eIirm~N~aFde~~~~~~dlyP~~--Lr~eId~~n~~Iy~~vNNGVYk~----GFA~tq 200 (324)
T COG0435 127 RVTVPVLWDKKTQTIVNNESAEIIRMFNSAFDEFGASAVDLYPEA--LRTEIDELNKWIYDTVNNGVYKA----GFATTQ 200 (324)
T ss_pred ceeEEEEEecCCCeeecCCcHHHHHHHHHHHHHHhhhccccCCHH--HHHHHHHHHhhhcccccCceeee----cccchH
Confidence 34799997642 344699999999988774 236688854 58889999988776665544322 111111
Q ss_pred ccchhchhhHHHHHHHHHHhH
Q psy13751 124 HIQGVSTHGLKDCILTLARYF 144 (149)
Q Consensus 124 ~~~~~~~~~l~~~l~~le~~~ 144 (149)
..-+..-..+=+.|+.||+.+
T Consensus 201 ~aYeea~~~lF~~Ld~lE~~L 221 (324)
T COG0435 201 EAYEEAVKKLFEALDKLEQIL 221 (324)
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 112222334445566666665
No 73
>cd03177 GST_C_Delta_Epsilon GST_C family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites th
Probab=93.80 E-value=0.038 Score=37.04 Aligned_cols=53 Identities=25% Similarity=0.456 Sum_probs=39.1
Q ss_pred HHHHHHHHHhHHhcccccccccceeeceeeccCccchhchhhHHHHHHHHHHhH
Q psy13751 91 DRALVDQRLYFDAGEIFPTIKQIAVSPCLLVRTHIQGVSTHGLKDCILTLARYF 144 (149)
Q Consensus 91 ~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~~ 144 (149)
+++++.+|+.|..+.+.+.+... +++.........+.....+.+.+..|++.+
T Consensus 2 ~~a~~~~wl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~le~~L 54 (118)
T cd03177 2 KRAIVNQRLHFDSGTLYQRLRDY-YYPILFGGAEPPEEKLDKLEEALDFLETFL 54 (118)
T ss_pred hHHHHHHHHHhhhchHHHHHHHH-HHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 58999999999999999887666 555433333344556677888888888776
No 74
>cd03188 GST_C_Beta GST_C family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site for
Probab=93.59 E-value=0.085 Score=34.64 Aligned_cols=54 Identities=15% Similarity=0.209 Sum_probs=37.3
Q ss_pred HHHHHHHHHhHHhcccccccccceeeceeecc-----CccchhchhhHHHHHHHHHHhHc
Q psy13751 91 DRALVDQRLYFDAGEIFPTIKQIAVSPCLLVR-----THIQGVSTHGLKDCILTLARYFL 145 (149)
Q Consensus 91 ~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~l~~le~~~~ 145 (149)
+|+++++|+.|..+.+.+.+..+ +++..... +...+.....+.+.+..||+.+-
T Consensus 2 ~ra~~~~w~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~ 60 (114)
T cd03188 2 ERARLLEWLNFLSSELHKAFGPL-FYPARWATDEAAQEEVKAAARERLAARLAYLDAQLA 60 (114)
T ss_pred cHHHHHHHHHHHhhhhchhhhhc-ccccccccChhhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 58999999999999999988766 55433211 11223456677788888887763
No 75
>KOG2903|consensus
Probab=93.58 E-value=0.28 Score=38.25 Aligned_cols=59 Identities=25% Similarity=0.250 Sum_probs=41.7
Q ss_pred CCCcCeEEeC---CeeeecHHHHHHHHHHHhC---C-----CCCCCCCCHHHHHHHHHHHhHHhcccccccc
Q psy13751 51 RRSLPALVDG---DLLICDSHAINAYLVSAYG---K-----NDVLYPKDSKDRALVDQRLYFDAGEIFPTIK 111 (149)
Q Consensus 51 ~g~VP~L~d~---g~~l~ES~aI~~YL~~~~~---~-----~~~L~p~~~~~~a~~~~~l~~~~~~~~~~~~ 111 (149)
.-+||||=|- ..+=-||.-|++.+...|. . .-+|+|. .-++++++|..|+...+-..+.
T Consensus 121 rfTVPVLWD~k~ktIVnNES~eIIr~fNs~f~ef~~~~e~~~lDL~P~--~L~~~Ide~N~wvy~~INNGVY 190 (319)
T KOG2903|consen 121 RFTVPVLWDLKTKTIVNNESSEIIRMFNSAFDEFNGIAENPVLDLYPS--SLRAQIDETNSWVYDKINNGVY 190 (319)
T ss_pred eEEEEEEEccccceeecCchHHHHHHHhhhhhhhhccccCCccccCCH--HHHHHHhhhhceecccccCcee
Confidence 3479999763 3455799999999993331 1 1457884 4688999999998877766543
No 76
>KOG3027|consensus
Probab=92.74 E-value=0.35 Score=36.51 Aligned_cols=85 Identities=12% Similarity=0.112 Sum_probs=56.4
Q ss_pred HHHHHHHHHhcccccccEEEecCCCCCCChhHHhhCCCCCcCeEEeCCeeeecHHHHHHHHHHHhCCCCCCCCCCHHHHH
Q psy13751 14 EIAELKEEIRKKEMEISVLVTFAPGETLDTAFLKQNPRRSLPALVDGDLLICDSHAINAYLVSAYGKNDVLYPKDSKDRA 93 (149)
Q Consensus 14 ~~~~l~~~i~~~e~~~~~~v~l~~~~~~~~~~~~~nP~g~VP~L~d~g~~l~ES~aI~~YL~~~~~~~~~L~p~~~~~~a 93 (149)
+..+|++...+.-..+|..|.... ..+| ++|.|+||.|.-|.+.+.|=.+|..+...+--.-.++. +..+++
T Consensus 34 ~ascLAVqtfLrMcnLPf~v~~~~----Naef--mSP~G~vPllr~g~~~~aef~pIV~fVeak~~~l~s~l--sE~qka 105 (257)
T KOG3027|consen 34 NASCLAVQTFLRMCNLPFNVRQRA----NAEF--MSPGGKVPLLRIGKTLFAEFEPIVDFVEAKGVTLTSWL--SEDQKA 105 (257)
T ss_pred chhHHHHHHHHHHcCCCceeeecC----Cccc--cCCCCCCceeeecchhhhhhhHHHHHHHHhccchhhhh--hhHHHH
Confidence 345666655555555543333322 2334 48999999999999999999999999988754312222 345678
Q ss_pred HHHHHHhHHhccc
Q psy13751 94 LVDQRLYFDAGEI 106 (149)
Q Consensus 94 ~~~~~l~~~~~~~ 106 (149)
.++.++++.++.+
T Consensus 106 dmra~vslVen~~ 118 (257)
T KOG3027|consen 106 DMRAYVSLVENLL 118 (257)
T ss_pred HHHHHHHHHHHHH
Confidence 8887777766554
No 77
>cd03179 GST_C_1 GST_C family, unknown subfamily 1; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=92.33 E-value=0.28 Score=31.66 Aligned_cols=53 Identities=15% Similarity=0.147 Sum_probs=36.2
Q ss_pred HHHHHHHHHhHHhcccccccccceeeceeec--c---CccchhchhhHHHHHHHHHHhH
Q psy13751 91 DRALVDQRLYFDAGEIFPTIKQIAVSPCLLV--R---THIQGVSTHGLKDCILTLARYF 144 (149)
Q Consensus 91 ~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~l~~~l~~le~~~ 144 (149)
+|+++++|+.|..+.+.+.+..+ .++..+. . +...+.....+.+.+..||+.+
T Consensus 2 ~ra~~~~wl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L 59 (105)
T cd03179 2 ERAQVLRWLFFEQYSHEPYIATL-RFLRVYLGLGEADAEVLAFLRERGHAALAVLEAHL 59 (105)
T ss_pred cHHHHHHHHHHhhcccCccceee-eeeEeeccCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 58999999999999999888765 4443321 1 1122345666777777787765
No 78
>cd03182 GST_C_GTT2_like GST_C family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensiti
Probab=91.58 E-value=0.15 Score=33.73 Aligned_cols=56 Identities=13% Similarity=-0.040 Sum_probs=37.2
Q ss_pred CHHHHHHHHHHHhHHhcccccccccceeecee-e-c----c---CccchhchhhHHHHHHHHHHhH
Q psy13751 88 DSKDRALVDQRLYFDAGEIFPTIKQIAVSPCL-L-V----R---THIQGVSTHGLKDCILTLARYF 144 (149)
Q Consensus 88 ~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~-~-~----~---~~~~~~~~~~l~~~l~~le~~~ 144 (149)
|+.+|+++++|+.|..+.+.+.+..+ +.+.. . + + +...+.....+.+++..||+.+
T Consensus 1 d~~~ra~~~~w~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L 65 (117)
T cd03182 1 TPLERAQIEMWQRRAELQGLYPIGQA-FRHATPGLKPPDREEQVPEWGERSKARAADFLAYLDTRL 65 (117)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCccccCccccccCHHHHHHHHHHHHHHHHHHHHHh
Confidence 46789999999999998888776655 43321 1 1 1 1122344566788888888876
No 79
>TIGR02183 GRXA Glutaredoxin, GrxA family. This model includes the E. coli glyutaredoxin GrxA which appears to have primary responsibility for the reduction of ribonucleotide reductase.
Probab=91.22 E-value=0.36 Score=30.79 Aligned_cols=37 Identities=5% Similarity=0.174 Sum_probs=29.4
Q ss_pred hhHHhhCCC--CCcCeEEeCCeeeecHHHHHHHHHHHhC
Q psy13751 43 TAFLKQNPR--RSLPALVDGDLLICDSHAINAYLVSAYG 79 (149)
Q Consensus 43 ~~~~~~nP~--g~VP~L~d~g~~l~ES~aI~~YL~~~~~ 79 (149)
+++....-. .+||++..+|..+..+..|..|+.++++
T Consensus 45 ~~l~~~~g~~~~tVP~ifi~g~~igG~~dl~~~~~~~~~ 83 (86)
T TIGR02183 45 ADLEKTVGKPVETVPQIFVDEKHVGGCTDFEQLVKENFD 83 (86)
T ss_pred HHHHHHhCCCCCCcCeEEECCEEecCHHHHHHHHHhccc
Confidence 345544333 6899999899999999999999988765
No 80
>PF09635 MetRS-N: MetRS-N binding domain; InterPro: IPR018285 This entry represents the N-terminal domain of methionyl-tRNA synthetase (MetRS). This N-terminal appended domain mediates non-catalytic complex formation through its interaction with a domain in the tRNA aminoacylation cofactor Arc1p. The interacting domains of MetRS, GluRS (glutamyl-tRNA synthetase) and Arc1p form a ternary complex resembling a classical GST homo-dimer []. Domain-swapping between symmetrically related MetRS-N and Arc1p-N domains generates a 2:2 tetramer held together by van der Waals forces. This domain is necessary for formation of the aminoacyl-tRNA synthetase complex necessary for tRNA nuclear export and shuttling as part of the translational apparatus. ; PDB: 2HSN_A.
Probab=91.19 E-value=0.13 Score=35.42 Aligned_cols=30 Identities=27% Similarity=0.414 Sum_probs=14.1
Q ss_pred CCCCcCeEEe--CCeeeecHHHHHHHHHHHhC
Q psy13751 50 PRRSLPALVD--GDLLICDSHAINAYLVSAYG 79 (149)
Q Consensus 50 P~g~VP~L~d--~g~~l~ES~aI~~YL~~~~~ 79 (149)
.--.-|-|.+ +|+.|+|+.||++||.+-|.
T Consensus 32 ed~~~~~L~~~~~gF~L~e~NAIvrYl~nDF~ 63 (122)
T PF09635_consen 32 EDESGPLLKDKKSGFELFEPNAIVRYLANDFE 63 (122)
T ss_dssp SS--S--EEE-S--S----HHHHHHHHTT--T
T ss_pred CccccceeeecCCceEEecccHHHHHHHhhcC
Confidence 3334488853 68999999999999998765
No 81
>cd03180 GST_C_2 GST_C family, unknown subfamily 2; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=90.81 E-value=0.2 Score=32.56 Aligned_cols=53 Identities=11% Similarity=0.092 Sum_probs=36.2
Q ss_pred HHHHHHHHHhHHhcccccccccceeeceeecc--Ccc---chhchhhHHHHHHHHHHhH
Q psy13751 91 DRALVDQRLYFDAGEIFPTIKQIAVSPCLLVR--THI---QGVSTHGLKDCILTLARYF 144 (149)
Q Consensus 91 ~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~~l~~~l~~le~~~ 144 (149)
+|+++++|+.|..+.+++.+..+ +.+..... ... .+...+.+.+++..||+.+
T Consensus 2 ~ra~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lE~~L 59 (110)
T cd03180 2 ARARADRWMDWQTSTLNPAFRYA-FWGLVRTPPEQRDPAAIAASLAAWAKLMAILDAQL 59 (110)
T ss_pred chhHHHHHHHHHHhhcChHHHHH-HHHHHcCCcccCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 58899999999999999988665 44322211 111 1234667888888888776
No 82
>cd03178 GST_C_Ure2p_like GST_C family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The N-terminal thioredoxin-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of GSH with a wide range of en
Probab=90.57 E-value=0.22 Score=32.72 Aligned_cols=53 Identities=21% Similarity=0.105 Sum_probs=35.0
Q ss_pred HHHHHHHHHhHHhcccccccccceeeceeecc---CccchhchhhHHHHHHHHHHhH
Q psy13751 91 DRALVDQRLYFDAGEIFPTIKQIAVSPCLLVR---THIQGVSTHGLKDCILTLARYF 144 (149)
Q Consensus 91 ~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~l~~le~~~ 144 (149)
+|+++++|+.|.++.+.+.+..+ +....++. +...+.....+.+.+..+|+.+
T Consensus 1 ~ra~~~~wl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L 56 (113)
T cd03178 1 ERYEVLQWLFFQMGGLGPMFGQA-GHFSRYAPEKIPYAIERYTNEAKRLYGVLDKRL 56 (113)
T ss_pred ChHHHHHHHHHHHccCCCcchHH-HHHHHhCCCCChHHHHHHHHHHHHHHHHHHHHH
Confidence 47899999999999999987654 33222222 1122334566777778887776
No 83
>PRK11200 grxA glutaredoxin 1; Provisional
Probab=90.29 E-value=0.64 Score=29.32 Aligned_cols=54 Identities=13% Similarity=0.153 Sum_probs=35.4
Q ss_pred hcccccccEEEecCCCCCCChhHHhhCC--CCCcCeEEeCCeeeecHHHHHHHHHHHhC
Q psy13751 23 RKKEMEISVLVTFAPGETLDTAFLKQNP--RRSLPALVDGDLLICDSHAINAYLVSAYG 79 (149)
Q Consensus 23 ~~~e~~~~~~v~l~~~~~~~~~~~~~nP--~g~VP~L~d~g~~l~ES~aI~~YL~~~~~ 79 (149)
.+++|+. +|+.......+++....- ..+||++..+|..+.....|..++...++
T Consensus 29 ~~i~~~~---idi~~~~~~~~el~~~~~~~~~~vP~ifi~g~~igg~~~~~~~~~~~~~ 84 (85)
T PRK11200 29 DDFDYRY---VDIHAEGISKADLEKTVGKPVETVPQIFVDQKHIGGCTDFEAYVKENLG 84 (85)
T ss_pred cCCcEEE---EECCCChHHHHHHHHHHCCCCCcCCEEEECCEEEcCHHHHHHHHHHhcc
Confidence 3555555 444321111234544333 36899999899999999999999988764
No 84
>cd03191 GST_C_Zeta GST_C family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates, but display modest GSH peroxidase activity. They are also implicated in the detoxification of th
Probab=90.18 E-value=0.19 Score=33.60 Aligned_cols=54 Identities=20% Similarity=0.118 Sum_probs=33.7
Q ss_pred HHHHHHHHHHhHHhcccccccccceeeceeecc-----CccchhchhhHHHHHHHHHHhH
Q psy13751 90 KDRALVDQRLYFDAGEIFPTIKQIAVSPCLLVR-----THIQGVSTHGLKDCILTLARYF 144 (149)
Q Consensus 90 ~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~l~~le~~~ 144 (149)
.+++++++|+.|+++.+++.+... +....... ....+.....+.+.+..+|+.+
T Consensus 2 ~~ra~~~~w~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L 60 (121)
T cd03191 2 KKRARVRALALIIACDIHPLNNLR-VLKYLTEELGLDEEAKNAWYRHWIARGFAALEKLL 60 (121)
T ss_pred hhHHHHHHHHHHHHccCCccccHH-HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 579999999999999999875444 33221111 1111223345677777777765
No 85
>cd03185 GST_C_Tau GST_C family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropi
Probab=89.72 E-value=0.22 Score=33.39 Aligned_cols=50 Identities=12% Similarity=0.187 Sum_probs=36.0
Q ss_pred HHHHHHHHHHhHHhcccccccccceeeceeeccCccchhchhhHHHHHHHHHHhH
Q psy13751 90 KDRALVDQRLYFDAGEIFPTIKQIAVSPCLLVRTHIQGVSTHGLKDCILTLARYF 144 (149)
Q Consensus 90 ~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~~ 144 (149)
.+|+++++|+.|..+.+.+.+..+ +.+. +...+.....+.+.+..||+.+
T Consensus 2 ~~ra~~~~w~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~l~~le~~L 51 (126)
T cd03185 2 YERAVARFWAAFIDDKLFPAGRKV-LAAK----GEEREKAKEEALEALKVLEEEL 51 (126)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHH-Hccc----hHHHHHHHHHHHHHHHHHHHHh
Confidence 478999999999999998887666 4321 2233345667778888888766
No 86
>cd03186 GST_C_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=89.51 E-value=0.26 Score=32.19 Aligned_cols=50 Identities=18% Similarity=0.195 Sum_probs=35.7
Q ss_pred HHHHHHHHHHhHHhcccccccccceeeceeeccCccchhchhhHHHHHHHHHHhH
Q psy13751 90 KDRALVDQRLYFDAGEIFPTIKQIAVSPCLLVRTHIQGVSTHGLKDCILTLARYF 144 (149)
Q Consensus 90 ~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~~ 144 (149)
.+|++++.|+.|.++.+.+.+..+ +.+. +...+.....+.+.+..||+.+
T Consensus 2 ~~ra~~r~w~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~l~~le~~L 51 (107)
T cd03186 2 VARARSRLLMHRIEQDWYPLVDTI-EKGR----KKEAEKARKELRESLLALAPVF 51 (107)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHH-HhCc----HHHHHHHHHHHHHHHHHHHHHH
Confidence 579999999999999998887665 4321 2223445667777888888765
No 87
>KOG3029|consensus
Probab=89.48 E-value=0.83 Score=36.12 Aligned_cols=51 Identities=18% Similarity=0.142 Sum_probs=35.3
Q ss_pred HHHhcccccccEEEecCCCCCCChhHHhhCCCCCcCeEEeCCeeeecHHHHHHHHHH
Q psy13751 20 EEIRKKEMEISVLVTFAPGETLDTAFLKQNPRRSLPALVDGDLLICDSHAINAYLVS 76 (149)
Q Consensus 20 ~~i~~~e~~~~~~v~l~~~~~~~~~~~~~nP~g~VP~L~d~g~~l~ES~aI~~YL~~ 76 (149)
+-.-|++|.+ +.|+.... . =.+-+-..|||+|...|..+.||.+|+.-|+.
T Consensus 109 LDyhgisY~V-VEVnpV~r----~-eIk~SsykKVPil~~~Geqm~dSsvIIs~laT 159 (370)
T KOG3029|consen 109 LDYHGISYAV-VEVNPVLR----Q-EIKWSSYKKVPILLIRGEQMVDSSVIISLLAT 159 (370)
T ss_pred HhhcCCceEE-EEecchhh----h-hccccccccccEEEeccceechhHHHHHHHHH
Confidence 3455778888 77775431 1 12334688999998656679999999887744
No 88
>PRK10329 glutaredoxin-like protein; Provisional
Probab=89.41 E-value=0.51 Score=29.89 Aligned_cols=45 Identities=24% Similarity=0.289 Sum_probs=25.9
Q ss_pred HHHHHHHhcccccccEEEecCCCCCCChhHHhhCCCCCcCeEEeCCeee
Q psy13751 16 AELKEEIRKKEMEISVLVTFAPGETLDTAFLKQNPRRSLPALVDGDLLI 64 (149)
Q Consensus 16 ~~l~~~i~~~e~~~~~~v~l~~~~~~~~~~~~~nP~g~VP~L~d~g~~l 64 (149)
++..+.-.|++|+. +.|+ ... ...+.+..++..+||+++.++..+
T Consensus 17 ak~~L~~~gI~~~~-idi~--~~~-~~~~~~~~~g~~~vPvv~i~~~~~ 61 (81)
T PRK10329 17 TKRAMESRGFDFEM-INVD--RVP-EAAETLRAQGFRQLPVVIAGDLSW 61 (81)
T ss_pred HHHHHHHCCCceEE-EECC--CCH-HHHHHHHHcCCCCcCEEEECCEEE
Confidence 33334445777766 4444 211 122334457999999999777543
No 89
>PF11287 DUF3088: Protein of unknown function (DUF3088); InterPro: IPR021439 This family of proteins with unknown function appears to be restricted to Proteobacteria.
Probab=88.19 E-value=0.68 Score=31.39 Aligned_cols=30 Identities=37% Similarity=0.423 Sum_probs=24.0
Q ss_pred CCCcCeEEe-CC-------------eeeecHHHHHHHHHHHhCC
Q psy13751 51 RRSLPALVD-GD-------------LLICDSHAINAYLVSAYGK 80 (149)
Q Consensus 51 ~g~VP~L~d-~g-------------~~l~ES~aI~~YL~~~~~~ 80 (149)
+...|+|+- +| ..|.+...|+.||+++|+-
T Consensus 66 ~QslPvLVL~~~~~~~~~~~~~~~~rfi~d~~~I~~~La~r~g~ 109 (112)
T PF11287_consen 66 NQSLPVLVLADGAPSPDDAGSHGGRRFIDDPRRILRYLAERHGF 109 (112)
T ss_pred ccCCCEEEeCCCCCCcccccccCCeEEeCCHHHHHHHHHHHcCC
Confidence 567899973 22 2789999999999999984
No 90
>cd03181 GST_C_EFB1gamma GST_C family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role
Probab=88.06 E-value=0.27 Score=32.81 Aligned_cols=54 Identities=20% Similarity=0.251 Sum_probs=36.0
Q ss_pred HHHHHHHHHhHHhcccccccccceeeceeecc---CccchhchhhHHHHHHHHHHhHc
Q psy13751 91 DRALVDQRLYFDAGEIFPTIKQIAVSPCLLVR---THIQGVSTHGLKDCILTLARYFL 145 (149)
Q Consensus 91 ~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~l~~le~~~~ 145 (149)
+|+++++|+.|..+.+.+.+... +.+..... ....+.....+.+.+..|++.+.
T Consensus 1 ~ra~~~~wl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~ 57 (123)
T cd03181 1 EEAQVLQWVSFANTELLPAVAAW-FLPLLGIAPYNKKSVEAALEELDRVLGVLEERLL 57 (123)
T ss_pred ChHHHHHHHHHHHhhhHHHHHHH-HHHHcCccCCCHHHHHHHHHHHHHHHHHHHHHHc
Confidence 37889999999999999987766 54432211 11223345666777888887763
No 91
>cd03418 GRX_GRXb_1_3_like Glutaredoxin (GRX) family, GRX bacterial class 1 and 3 (b_1_3)-like subfamily; composed of bacterial GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known i
Probab=87.52 E-value=1.4 Score=26.63 Aligned_cols=49 Identities=18% Similarity=0.260 Sum_probs=31.9
Q ss_pred hcccccccEEEecCCCCCCChhHHhhCCCC-CcCeEEeCCeeeecHHHHHHHH
Q psy13751 23 RKKEMEISVLVTFAPGETLDTAFLKQNPRR-SLPALVDGDLLICDSHAINAYL 74 (149)
Q Consensus 23 ~~~e~~~~~~v~l~~~~~~~~~~~~~nP~g-~VP~L~d~g~~l~ES~aI~~YL 74 (149)
.+++|+. +.|+.. ....+++.+..... +||++..+|..+.....+.++-
T Consensus 23 ~~i~~~~-i~i~~~--~~~~~~~~~~~~~~~~vP~v~i~g~~igg~~~~~~~~ 72 (75)
T cd03418 23 KGVDYEE-IDVDGD--PALREEMINRSGGRRTVPQIFIGDVHIGGCDDLYALE 72 (75)
T ss_pred CCCcEEE-EECCCC--HHHHHHHHHHhCCCCccCEEEECCEEEeChHHHHHHH
Confidence 4677766 544422 22224555555555 9999998888888888777764
No 92
>cd03195 GST_C_4 GST_C family, unknown subfamily 4; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=86.42 E-value=1.1 Score=29.96 Aligned_cols=55 Identities=9% Similarity=0.135 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHhHHhcccccccccceeeceeec-c--CccchhchhhHHHHHHHHHHhH
Q psy13751 89 SKDRALVDQRLYFDAGEIFPTIKQIAVSPCLLV-R--THIQGVSTHGLKDCILTLARYF 144 (149)
Q Consensus 89 ~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~l~~~l~~le~~~ 144 (149)
|.+|+++.+|+.|+.+.+++..... .+...+. . ....+...+.+++.+..++..+
T Consensus 1 ~~~ra~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l 58 (114)
T cd03195 1 PRQRARARQVQAWLRSDLLPIRVER-STEVVFAGAKAEPLSEAAQAAAEKLIAVAEALL 58 (114)
T ss_pred CHhhHHHHHHHHHHHhhHHHHHHhC-CccceecCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 3579999999999999999863222 1111111 1 1234455666677777777654
No 93
>TIGR02181 GRX_bact Glutaredoxin, GrxC family. This family of glutaredoxins includes the E. coli protein GrxC (Grx3) which appears to have a secondary role in reducing ribonucleotide reductase (in the absence of GrxA) possibly indicating a role in the reduction of other protein disulfides.
Probab=86.00 E-value=1.6 Score=26.87 Aligned_cols=51 Identities=16% Similarity=0.248 Sum_probs=35.5
Q ss_pred hcccccccEEEecCCCCCCChhHHhhCCCCCcCeEEeCCeeeecHHHHHHHHHH
Q psy13751 23 RKKEMEISVLVTFAPGETLDTAFLKQNPRRSLPALVDGDLLICDSHAINAYLVS 76 (149)
Q Consensus 23 ~~~e~~~~~~v~l~~~~~~~~~~~~~nP~g~VP~L~d~g~~l~ES~aI~~YL~~ 76 (149)
.+++|+. +.|+.. ....+++.+.+....||++..+|..+.....+..+..+
T Consensus 22 ~~i~~~~-~di~~~--~~~~~~~~~~~g~~~vP~i~i~g~~igg~~~~~~~~~~ 72 (79)
T TIGR02181 22 KGVTFTE-IRVDGD--PALRDEMMQRSGRRTVPQIFIGDVHVGGCDDLYALDRE 72 (79)
T ss_pred cCCCcEE-EEecCC--HHHHHHHHHHhCCCCcCEEEECCEEEcChHHHHHHHHc
Confidence 4777777 555432 22335677778899999999888888887777666443
No 94
>cd03200 GST_C_JTV1 GST_C family, JTV-1 subfamily; composed of uncharacterized proteins with similarity to the translation product of the human JTV-1 gene. Human JTV-1, a gene of unknown function, initiates within the human PMS2 gene promoter, but is transcribed from the opposite strand. PMS2 encodes a protein involved in DNA mismatch repair and is mutated in a subset of patients with hereditary nonpolyposis colon cancer. It is unknown whether the expression of JTV-1 affects that of PMS2, or vice versa, as a result of their juxtaposition. JTV-1 is up-regulated while PMS2 is down-regulated in tumor cell spheroids that show increased resistance to anticancer cytotoxic drugs compared with tumor cell monolayers indicating that suppressed DNA mismatch repair may be a mechanism for multicellular resistance to alkylating agents.
Probab=85.84 E-value=0.63 Score=30.30 Aligned_cols=31 Identities=10% Similarity=0.029 Sum_probs=25.2
Q ss_pred HHHHHHHhCCCCCCCCCCHHHHHHHHHHHhHHhcc
Q psy13751 71 NAYLVSAYGKNDVLYPKDSKDRALVDQRLYFDAGE 105 (149)
Q Consensus 71 ~~YL~~~~~~~~~L~p~~~~~~a~~~~~l~~~~~~ 105 (149)
++||++.- .|+|.++.+++++++|+++....
T Consensus 1 ~r~~~~~~----~~~~~~~~~~~~vd~~~d~~~~~ 31 (96)
T cd03200 1 ARFLYRLL----GPAPNAPNAATNIDSWVDTAIFQ 31 (96)
T ss_pred CchHHHHh----cccCCCchHHHHHHHHHHHHHHH
Confidence 47898882 39999999999999999976533
No 95
>KOG3028|consensus
Probab=85.39 E-value=1.6 Score=34.76 Aligned_cols=62 Identities=18% Similarity=0.183 Sum_probs=44.6
Q ss_pred hCCCCCcCeEEe-CCeeeecHHHHHHHHHHHhCCCCCCCCC-CHHHHHHHHHHHhHHhccccccc
Q psy13751 48 QNPRRSLPALVD-GDLLICDSHAINAYLVSAYGKNDVLYPK-DSKDRALVDQRLYFDAGEIFPTI 110 (149)
Q Consensus 48 ~nP~g~VP~L~d-~g~~l~ES~aI~~YL~~~~~~~~~L~p~-~~~~~a~~~~~l~~~~~~~~~~~ 110 (149)
..|.|++|+|+. +|..+..-.-|..||...-.. ..+=+. ...+.+....|+.+..+.+.+++
T Consensus 44 ~s~sg~LP~l~~~ng~~va~~~~iv~~L~k~~~k-y~~d~dl~~kq~a~~~a~~sll~~~l~~a~ 107 (313)
T KOG3028|consen 44 RSPSGKLPYLITDNGTKVAGPVKIVQFLKKNTKK-YNLDADLSAKQLADTLAFMSLLEENLEPAL 107 (313)
T ss_pred CCCCCCCCeEEecCCceeccHHHHHHHHHHhccc-CCcCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 358999999985 458899999999999874211 112121 15678888999998888877654
No 96
>cd03190 GST_C_ECM4_like GST_C family, ECM4-like subfamily; composed of predominantly uncharacterized and taxonomically diverse proteins with similarity to the translation product of the Saccharomyces cerevisiae gene ECM4. ECM4, a gene of unknown function, is involved in cell surface biosynthesis and architecture. S. cerevisiae ECM4 mutants show increased amounts of the cell wall hexose, N-acetylglucosamine. More recently, global gene expression analysis shows that ECM4 is upregulated during genotoxic conditions and together with the expression profiles of 18 other genes could potentially differentiate between genotoxic and cytotoxic insults in yeast.
Probab=84.33 E-value=0.99 Score=31.38 Aligned_cols=51 Identities=10% Similarity=-0.003 Sum_probs=34.7
Q ss_pred HHHHHHHHHHhHHhcccccccccceeeceeeccCccchhchhhHHHHHHHHHHhH
Q psy13751 90 KDRALVDQRLYFDAGEIFPTIKQIAVSPCLLVRTHIQGVSTHGLKDCILTLARYF 144 (149)
Q Consensus 90 ~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~~ 144 (149)
..|+++++|++|....+.+.+... .. ...+...+.....+.+.+..||+.+
T Consensus 3 ~~~a~i~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~l~~~l~~LE~~L 53 (142)
T cd03190 3 ELRSEIDELNEWIYDNINNGVYKA-GF---ATTQEAYDEAVDELFEALDRLEELL 53 (142)
T ss_pred hHHHHHHHHHHHHHHHHhhHHHHH-hh---ccCHHHHHHHHHHHHHHHHHHHHHH
Confidence 458889999999999988775443 21 1222233445667788888888875
No 97
>cd03419 GRX_GRXh_1_2_like Glutaredoxin (GRX) family, GRX human class 1 and 2 (h_1_2)-like subfamily; composed of proteins similar to human GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes
Probab=84.26 E-value=3.9 Score=25.01 Aligned_cols=53 Identities=13% Similarity=0.137 Sum_probs=36.9
Q ss_pred hcccccccEEEecCCC-CCCChhHHhhCCCCCcCeEEeCCeeeecHHHHHHHHHH
Q psy13751 23 RKKEMEISVLVTFAPG-ETLDTAFLKQNPRRSLPALVDGDLLICDSHAINAYLVS 76 (149)
Q Consensus 23 ~~~e~~~~~~v~l~~~-~~~~~~~~~~nP~g~VP~L~d~g~~l~ES~aI~~YL~~ 76 (149)
.+++|.. ..++.... ......+.+++...++|++..+|..+..+..|..+..+
T Consensus 23 ~~~~~~~-~~v~~~~~~~~~~~~~~~~~g~~~~P~v~~~g~~igg~~~~~~~~~~ 76 (82)
T cd03419 23 LGVKPAV-VELDQHEDGSEIQDYLQELTGQRTVPNVFIGGKFIGGCDDLMALHKS 76 (82)
T ss_pred cCCCcEE-EEEeCCCChHHHHHHHHHHhCCCCCCeEEECCEEEcCHHHHHHHHHc
Confidence 4667777 66665432 11123455777888999999899999999988887654
No 98
>COG0695 GrxC Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=82.56 E-value=3 Score=26.23 Aligned_cols=43 Identities=14% Similarity=0.184 Sum_probs=26.2
Q ss_pred hcccccccEEEecCCCCCCChhHH-hhCCCCCcCeEEeCCeeeecH
Q psy13751 23 RKKEMEISVLVTFAPGETLDTAFL-KQNPRRSLPALVDGDLLICDS 67 (149)
Q Consensus 23 ~~~e~~~~~~v~l~~~~~~~~~~~-~~nP~g~VP~L~d~g~~l~ES 67 (149)
.|++|+. +.++-..++ ...++. ..++..+||++..||..+.-.
T Consensus 24 ~g~~~~~-i~~~~~~~~-~~~~~~~~~~g~~tvP~I~i~~~~igg~ 67 (80)
T COG0695 24 KGVDYEE-IDVDDDEPE-EAREMVKRGKGQRTVPQIFIGGKHVGGC 67 (80)
T ss_pred cCCCcEE-EEecCCcHH-HHHHHHHHhCCCCCcCEEEECCEEEeCc
Confidence 4666666 444433221 233444 556999999999888666543
No 99
>cd03187 GST_C_Phi GST_C family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes a
Probab=78.28 E-value=1.6 Score=28.59 Aligned_cols=53 Identities=17% Similarity=0.166 Sum_probs=33.4
Q ss_pred HHHHHHHHHhHHhcccccccccceeece----eeccCcc---chhchhhHHHHHHHHHHhH
Q psy13751 91 DRALVDQRLYFDAGEIFPTIKQIAVSPC----LLVRTHI---QGVSTHGLKDCILTLARYF 144 (149)
Q Consensus 91 ~~a~~~~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~---~~~~~~~l~~~l~~le~~~ 144 (149)
+|+++.+|+.|..+.+.+.+... .... ..+.... .+.....+.+++..||+.+
T Consensus 2 ~ra~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L 61 (118)
T cd03187 2 ERAIVEQWLEVESHQFDPPASAL-AFELVFKPMLGLPTDEAVVEENEEKLKKVLDVYEARL 61 (118)
T ss_pred chHHHHHHHHHHHhhcchhHHHH-HHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHHc
Confidence 58899999999999998876543 2211 1111111 1234566777788888765
No 100
>PF00462 Glutaredoxin: Glutaredoxin; InterPro: IPR002109 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. This entry represents Glutaredoxin.; GO: 0009055 electron carrier activity, 0015035 protein disulfide oxidoreductase activity, 0045454 cell redox homeostasis; PDB: 1QFN_A 1GRX_A 1EGO_A 1EGR_A 3RHC_A 3RHB_A 3IPZ_A 1NHO_A 3GX8_A 3D5J_A ....
Probab=76.26 E-value=2.1 Score=24.94 Aligned_cols=42 Identities=17% Similarity=0.096 Sum_probs=27.2
Q ss_pred HHHhcccccccEEEecCCCCCCChhHHhhCCCCCcCeEEeCCeee
Q psy13751 20 EEIRKKEMEISVLVTFAPGETLDTAFLKQNPRRSLPALVDGDLLI 64 (149)
Q Consensus 20 ~~i~~~e~~~~~~v~l~~~~~~~~~~~~~nP~g~VP~L~d~g~~l 64 (149)
+.-.+++|+. +.|+.. ....+++.+.+...++|++..||..+
T Consensus 19 L~~~~i~y~~-~dv~~~--~~~~~~l~~~~g~~~~P~v~i~g~~I 60 (60)
T PF00462_consen 19 LDEKGIPYEE-VDVDED--EEAREELKELSGVRTVPQVFIDGKFI 60 (60)
T ss_dssp HHHTTBEEEE-EEGGGS--HHHHHHHHHHHSSSSSSEEEETTEEE
T ss_pred HHHcCCeeeE-cccccc--hhHHHHHHHHcCCCccCEEEECCEEC
Confidence 3445677766 444432 23345677777889999998877653
No 101
>cd03183 GST_C_Theta GST_C family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenatio
Probab=75.64 E-value=1.2 Score=29.87 Aligned_cols=54 Identities=20% Similarity=0.218 Sum_probs=32.8
Q ss_pred HHHHHHHHhHHhcccccccccceeecee----ec-cC---ccchhchhhHHHHHHHHHHhHcc
Q psy13751 92 RALVDQRLYFDAGEIFPTIKQIAVSPCL----LV-RT---HIQGVSTHGLKDCILTLARYFLL 146 (149)
Q Consensus 92 ~a~~~~~l~~~~~~~~~~~~~~~~~~~~----~~-~~---~~~~~~~~~l~~~l~~le~~~~~ 146 (149)
++++++|+.|..+.+.+.+... +.... +. .. ...+...+.+.+++..+|+.++.
T Consensus 2 ra~~~~wl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~ 63 (126)
T cd03183 2 RARVDEYLAWQHTNLRLGCAKY-FWQKVLLPLLGGKPVSPEKVKKAEENLEESLDLLENYFLK 63 (126)
T ss_pred cccHHHHHHHHHhhhHhhHHHH-HHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 6788999999998988766543 22211 11 11 11223455677888888876543
No 102
>cd03206 GST_C_7 GST_C family, unknown subfamily 7; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=74.19 E-value=0.93 Score=29.22 Aligned_cols=48 Identities=15% Similarity=0.008 Sum_probs=28.3
Q ss_pred HHHHhHHhcccccccccceeeceeeccCccchhchhhHHHHHHHHHHhH
Q psy13751 96 DQRLYFDAGEIFPTIKQIAVSPCLLVRTHIQGVSTHGLKDCILTLARYF 144 (149)
Q Consensus 96 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~~ 144 (149)
++|+.|..+.+.+..... .+..........+.....+.+++..+|+.+
T Consensus 2 ~~w~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~le~~L 49 (100)
T cd03206 2 QRWLSVAAGEIANGPAAA-RLITLFGAPLDKETAIARAHRLLRLLEEHL 49 (100)
T ss_pred ceehhhhhhhcccchhHH-HHHHHhCCHhHHHHHHHHHHHHHHHHHHHH
Confidence 578888888887664443 222112112223345667777888887765
No 103
>TIGR02194 GlrX_NrdH Glutaredoxin-like protein NrdH. NrdH-redoxin is a representative of a class of small redox proteins that contain a conserved CXXC motif and are characterized by a glutaredoxin-like amino acid sequence and thioredoxin-like activity profile. Unlike other the glutaredoxins to which it is most closely related, NrdH aparrently does not interact with glutathione/glutathione reductase, but rather with thioredoxin reductase to catalyze the reduction of ribonucleotide reductase.
Probab=71.16 E-value=6.6 Score=23.73 Aligned_cols=41 Identities=15% Similarity=0.171 Sum_probs=23.1
Q ss_pred HHHHHHhcccccccEEEecCCCCCCChhHHhhCCCCCcCeEEeCC
Q psy13751 17 ELKEEIRKKEMEISVLVTFAPGETLDTAFLKQNPRRSLPALVDGD 61 (149)
Q Consensus 17 ~l~~~i~~~e~~~~~~v~l~~~~~~~~~~~~~nP~g~VP~L~d~g 61 (149)
+-.+.-.+++|+. +.|+ .. ....+.++.++..+||+++.+|
T Consensus 16 k~~L~~~~i~~~~-~di~--~~-~~~~~~~~~~g~~~vP~v~~~g 56 (72)
T TIGR02194 16 KKALEEHGIAFEE-INID--EQ-PEAIDYVKAQGFRQVPVIVADG 56 (72)
T ss_pred HHHHHHCCCceEE-EECC--CC-HHHHHHHHHcCCcccCEEEECC
Confidence 3333445777766 4444 21 1223334456778999998754
No 104
>cd03203 GST_C_Lambda GST_C family, Class Lambda subfamily; composed of plant-specific class Lambda GSTs. GSTs are cytosolic, usually dimeric, proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Lambda subfamily was recently discovered, together with dehydroascorbate reductases (DHARs), as two outlying groups of the GST superfamily in Arabidopsis thaliana, which contain conserved active site cysteines. Characterization of recombinant A. thaliana proteins show that Lambda class GSTs are monomeric, similar
Probab=70.87 E-value=3.7 Score=27.53 Aligned_cols=14 Identities=29% Similarity=0.551 Sum_probs=12.5
Q ss_pred CHHHHHHHHHHHhH
Q psy13751 88 DSKDRALVDQRLYF 101 (149)
Q Consensus 88 ~~~~~a~~~~~l~~ 101 (149)
|+.+|+++++|+.|
T Consensus 1 d~~~ra~~~~~~~~ 14 (120)
T cd03203 1 DPAKREFADELLAY 14 (120)
T ss_pred CHHHHHHHHHHHHH
Confidence 46789999999999
No 105
>TIGR02180 GRX_euk Glutaredoxin. This model represents eukaryotic glutaredoxins and includes sequences from fungi, plants and metazoans as well as viruses.
Probab=69.17 E-value=22 Score=21.55 Aligned_cols=32 Identities=16% Similarity=0.190 Sum_probs=25.7
Q ss_pred HHhhCCCCCcCeEEeCCeeeecHHHHHHHHHH
Q psy13751 45 FLKQNPRRSLPALVDGDLLICDSHAINAYLVS 76 (149)
Q Consensus 45 ~~~~nP~g~VP~L~d~g~~l~ES~aI~~YL~~ 76 (149)
+.+.....++|++..+|..+..+..+..+..+
T Consensus 46 l~~~~g~~~vP~v~i~g~~igg~~~~~~~~~~ 77 (84)
T TIGR02180 46 LEEITGQRTVPNIFINGKFIGGCSDLLALYKS 77 (84)
T ss_pred HHHHhCCCCCCeEEECCEEEcCHHHHHHHHHc
Confidence 45667778999999899999998888777643
No 106
>cd00299 GST_C_family Glutathione S-transferase (GST) family, C-terminal alpha helical domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an activ
Probab=68.87 E-value=6.1 Score=24.49 Aligned_cols=48 Identities=6% Similarity=0.105 Sum_probs=31.2
Q ss_pred HHHHhHHhcccccccccceeeceeec---cCccchhchhhHHHHHHHHHHhH
Q psy13751 96 DQRLYFDAGEIFPTIKQIAVSPCLLV---RTHIQGVSTHGLKDCILTLARYF 144 (149)
Q Consensus 96 ~~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~l~~le~~~ 144 (149)
++|+.|..+.+.+.+... .++.... .+...+...+.+.+.+..|++.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L 52 (100)
T cd00299 2 RAWEEWADTTLEPAARRL-LLLAFVGPEVDEAALEEAREELAAALAALEKLL 52 (100)
T ss_pred hHHHHHHHhhcCCcccce-eeeeccCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 578888888888887766 5544322 12223445666777788887776
No 107
>cd03028 GRX_PICOT_like Glutaredoxin (GRX) family, PKC-interacting cousin of TRX (PICOT)-like subfamily; composed of PICOT and GRX-PICOT-like proteins. The non-PICOT members of this family contain only the GRX-like domain, whereas PICOT contains an N-terminal TRX-like domain followed by one to three GRX-like domains. It is interesting to note that PICOT from plants contain three repeats of the GRX-like domain, metazoan proteins (except for insect) have two repeats, while fungal sequences contain only one copy of the domain. PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli. Both GRX and TRX domains of PICOT are required for its activity. Characterized non-PICOT members of this family include CXIP1, a CAX-interacting protein
Probab=67.57 E-value=15 Score=23.29 Aligned_cols=49 Identities=8% Similarity=0.091 Sum_probs=32.6
Q ss_pred hcccccccEEEecCCCCCCChhHHhhCCCCCcCeEEeCCeeeecHHHHHHHH
Q psy13751 23 RKKEMEISVLVTFAPGETLDTAFLKQNPRRSLPALVDGDLLICDSHAINAYL 74 (149)
Q Consensus 23 ~~~e~~~~~~v~l~~~~~~~~~~~~~nP~g~VP~L~d~g~~l~ES~aI~~YL 74 (149)
.+++|+. +.|+ .......++.+.+...+||++..+|..+.....+....
T Consensus 36 ~~i~y~~-idv~--~~~~~~~~l~~~~g~~tvP~vfi~g~~iGG~~~l~~l~ 84 (90)
T cd03028 36 LGVDFGT-FDIL--EDEEVRQGLKEYSNWPTFPQLYVNGELVGGCDIVKEMH 84 (90)
T ss_pred cCCCeEE-EEcC--CCHHHHHHHHHHhCCCCCCEEEECCEEEeCHHHHHHHH
Confidence 4677777 5443 32222345567778889999988888888777666643
No 108
>TIGR00365 monothiol glutaredoxin, Grx4 family. The gene for the member of this glutaredoxin family in E. coli, originally designated ydhD, is now designated grxD. Its protein, Grx4, is a monothiol glutaredoxin similar to Grx5 of yeast, which is involved in iron-sulfur cluster formation.
Probab=59.76 E-value=35 Score=22.10 Aligned_cols=48 Identities=8% Similarity=0.061 Sum_probs=30.9
Q ss_pred hcccccccEEEecCCCCCCChhHHhhCCCCCcCeEEeCCeeeecHHHHHHH
Q psy13751 23 RKKEMEISVLVTFAPGETLDTAFLKQNPRRSLPALVDGDLLICDSHAINAY 73 (149)
Q Consensus 23 ~~~e~~~~~~v~l~~~~~~~~~~~~~nP~g~VP~L~d~g~~l~ES~aI~~Y 73 (149)
.+++|+. +|+........++.+++...+||.+..+|..+.-...+...
T Consensus 40 ~~i~~~~---~di~~~~~~~~~l~~~tg~~tvP~vfi~g~~iGG~ddl~~l 87 (97)
T TIGR00365 40 CGVPFAY---VNVLEDPEIRQGIKEYSNWPTIPQLYVKGEFVGGCDIIMEM 87 (97)
T ss_pred cCCCEEE---EECCCCHHHHHHHHHHhCCCCCCEEEECCEEEeChHHHHHH
Confidence 4677766 45433222224455777788999998888877766665553
No 109
>cd03184 GST_C_Omega GST_C family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a re
Probab=57.45 E-value=14 Score=24.57 Aligned_cols=48 Identities=10% Similarity=-0.018 Sum_probs=30.1
Q ss_pred HHHHHHHHHhHHhcccccccccceeeceeeccCccchhchhhHHHHHHHHHHhHc
Q psy13751 91 DRALVDQRLYFDAGEIFPTIKQIAVSPCLLVRTHIQGVSTHGLKDCILTLARYFL 145 (149)
Q Consensus 91 ~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~~~ 145 (149)
+||+.+.|+.+++..+.+....+ .. +...+...+.+.+.+..+|+.+-
T Consensus 2 ~ra~~r~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~~~~l~~le~~L~ 49 (124)
T cd03184 2 EKAQQKLLLERFSKVVSAFYKLL-GA------PSDREEKKAELRSALENLEEELT 49 (124)
T ss_pred hHHHHHHHHHHHhhhhHHHHHHH-hc------cccchhhHHHHHHHHHHHHHHHH
Confidence 58889999999974444433333 21 22334456677778888887663
No 110
>cd03207 GST_C_8 GST_C family, unknown subfamily 8; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=43.10 E-value=8 Score=24.69 Aligned_cols=45 Identities=16% Similarity=0.183 Sum_probs=27.5
Q ss_pred HHHHhHHhcccccccccceeeceeeccCccchhchhhHHHHHHHHHHhH
Q psy13751 96 DQRLYFDAGEIFPTIKQIAVSPCLLVRTHIQGVSTHGLKDCILTLARYF 144 (149)
Q Consensus 96 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~~ 144 (149)
++|+.|..+.+++.+... +.+. .+...+.....+.+++..||+.+
T Consensus 2 ~~w~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~l~~le~~l 46 (103)
T cd03207 2 LRWLFFYAGVVEPALIAK-AMGI---EEPARMAGFGSYDDVLAALEQAL 46 (103)
T ss_pred eeeeeeccccccHHHHHH-HcCC---CcchhhhhhhhHHHHHHHHHHHH
Confidence 467778877887776555 4332 12223334566777788887765
No 111
>PF04564 U-box: U-box domain; InterPro: IPR003613 Quality control of intracellular proteins is essential for cellular homeostasis. Molecular chaperones recognise and contribute to the refolding of misfolded or unfolded proteins, whereas the ubiquitin-proteasome system mediates the degradation of such abnormal proteins. Ubiquitin-protein ligases (E3s) determine the substrate specificity for ubiquitylation and have been classified into HECT and RING-finger families. More recently, however, U-box proteins, which contain a domain (the U box) of about 70 amino acids that is conserved from yeast to humans, have been identified as a new type of E3 []. Members of the U-box family of proteins constitute a class of ubiquitin-protein ligases (E3s) distinct from the HECT-type and RING finger-containing E3 families []. Using yeast two-hybrid technology, all mammalian U-box proteins have been reported to interact with molecular chaperones or co-chaperones, including Hsp90, Hsp70, DnaJc7, EKN1, CRN, and VCP. This suggests that the function of U box-type E3s is to mediate the degradation of unfolded or misfolded proteins in conjunction with molecular chaperones as receptors that recognise such abnormal proteins [, ]. Unlike the RING finger domain, IPR001841 from INTERPRO, that is stabilised by Zn2+ ions coordinated by the cysteines and a histidine, the U-box scaffold is probably stabilised by a system of salt-bridges and hydrogen bonds. The charged and polar residues that participate in this network of bonds are more strongly conserved in the U-box proteins than in classic RING fingers, which supports their role in maintaining the stability of the U box. Thus, the U box appears to have evolved from a RING finger domain by appropriation of a new set of residues required to stabilise its structure, concomitant with the loss of the original, metal-chelating residues [].; GO: 0004842 ubiquitin-protein ligase activity, 0016567 protein ubiquitination, 0000151 ubiquitin ligase complex; PDB: 1T1H_A 2C2L_D 2C2V_V 1WGM_A 2KR4_A 3L1Z_B 3L1X_A 2KRE_A 3M63_A 2QIZ_A ....
Probab=40.46 E-value=28 Score=21.33 Aligned_cols=46 Identities=15% Similarity=0.261 Sum_probs=30.2
Q ss_pred CcCeEEeCCeeeecHHHHHHHHHHHhCCC---------CCCCCCCHHHHHHHHHHHh
Q psy13751 53 SLPALVDGDLLICDSHAINAYLVSAYGKN---------DVLYPKDSKDRALVDQRLY 100 (149)
Q Consensus 53 ~VP~L~d~g~~l~ES~aI~~YL~~~~~~~---------~~L~p~~~~~~a~~~~~l~ 100 (149)
+=||+...| ..+|-.+|..||....... ..|.| +..-|..+.+|+.
T Consensus 15 ~dPVi~~~G-~tyer~~I~~~l~~~~~~~P~t~~~l~~~~l~p-n~~Lk~~I~~~~~ 69 (73)
T PF04564_consen 15 RDPVILPSG-HTYERSAIERWLEQNGGTDPFTRQPLSESDLIP-NRALKSAIEEWCA 69 (73)
T ss_dssp SSEEEETTS-EEEEHHHHHHHHCTTSSB-TTT-SB-SGGGSEE--HHHHHHHHHHHH
T ss_pred hCceeCCcC-CEEcHHHHHHHHHcCCCCCCCCCCcCCcccceE-CHHHHHHHHHHHH
Confidence 458887667 8999999999999833211 11222 3455777777764
No 112
>PHA03050 glutaredoxin; Provisional
Probab=37.49 E-value=79 Score=20.94 Aligned_cols=30 Identities=17% Similarity=0.181 Sum_probs=23.1
Q ss_pred hhHHhhCCCCCcCeEEeCCeeeecHHHHHH
Q psy13751 43 TAFLKQNPRRSLPALVDGDLLICDSHAINA 72 (149)
Q Consensus 43 ~~~~~~nP~g~VP~L~d~g~~l~ES~aI~~ 72 (149)
.++.+++-..+||.+..+|..+.-...+..
T Consensus 59 ~~l~~~tG~~tVP~IfI~g~~iGG~ddl~~ 88 (108)
T PHA03050 59 DYFEQITGGRTVPRIFFGKTSIGGYSDLLE 88 (108)
T ss_pred HHHHHHcCCCCcCEEEECCEEEeChHHHHH
Confidence 567788888899999888887776655544
No 113
>PF06753 Bradykinin: Bradykinin; InterPro: IPR009608 This family consists of several bradykinin sequences. The skins of anuran amphibians, in addition to mucus glands, contain highly specialised poison glands, which, in reaction to stress or attack, exude a complex noxious cocktail of biologically active molecules. These secretions often contain a plethora of peptides among which bradykinin or structural variants have been identified [].; GO: 0005179 hormone activity, 0006950 response to stress, 0005576 extracellular region
Probab=32.86 E-value=16 Score=16.38 Aligned_cols=9 Identities=44% Similarity=0.781 Sum_probs=7.0
Q ss_pred hhhcccCch
Q psy13751 4 MRDKFDNQD 12 (149)
Q Consensus 4 ~~~~~~~~~ 12 (149)
.|.||-+||
T Consensus 11 frgkfhsqs 19 (19)
T PF06753_consen 11 FRGKFHSQS 19 (19)
T ss_pred ccccccccC
Confidence 577888885
No 114
>TIGR02681 phage_pRha phage regulatory protein, rha family. Members of this protein family are found in temperate phage and bacterial prophage regions. Members include the product of the rha gene of the lambdoid phage phi-80, a late operon gene. The presence of this gene interferes with infection of bacterial strains that lack integration host factor (IHF), which regulates the rha gene. It is suggested that pRha is a phage regulatory protein.
Probab=31.32 E-value=56 Score=21.87 Aligned_cols=26 Identities=12% Similarity=0.245 Sum_probs=21.3
Q ss_pred cCeE-EeCCeeeecHHHHHHHHHHHhC
Q psy13751 54 LPAL-VDGDLLICDSHAINAYLVSAYG 79 (149)
Q Consensus 54 VP~L-~d~g~~l~ES~aI~~YL~~~~~ 79 (149)
+|.+ ..+|.+++.|..|+++...+|.
T Consensus 2 ~~~v~~~~~~~~ttS~~IAe~fgK~H~ 28 (108)
T TIGR02681 2 FPKVFTKRNQVVTDSLTMAQMFGKRHD 28 (108)
T ss_pred CceEEEECCEEEEeHHHHHHHHCcchH
Confidence 3544 4789999999999999988776
No 115
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases.
Probab=30.43 E-value=44 Score=24.66 Aligned_cols=26 Identities=38% Similarity=0.672 Sum_probs=20.3
Q ss_pred CeeeecHHHHHHHHHHHhC-CCCCCCC
Q psy13751 61 DLLICDSHAINAYLVSAYG-KNDVLYP 86 (149)
Q Consensus 61 g~~l~ES~aI~~YL~~~~~-~~~~L~p 86 (149)
+..|++|..|-.|+.++|+ ....+.|
T Consensus 155 d~lIaDs~~I~~y~~~~y~~~~s~~Ia 181 (185)
T PF09314_consen 155 DRLIADSKGIQDYIKERYGRKKSTFIA 181 (185)
T ss_pred CEEEEcCHHHHHHHHHHcCCCCcEEec
Confidence 3489999999999999998 5444444
No 116
>TIGR01764 excise DNA binding domain, excisionase family. An excisionase, or Xis protein, is a small protein that binds and promotes excisive recombination; it is not enzymatically active. This model represents a number of putative excisionases and related proteins from temperate phage, plasmids, and transposons, as well as DNA binding domains of other proteins, such as a DNA modification methylase. This model identifies mostly small proteins and N-terminal regions of large proteins, but some proteins appear to have two copies. This domain appears similar, in both sequence and predicted secondary structure (PSIPRED) to the MerR family of transcriptional regulators (pfam00376).
Probab=26.13 E-value=1.1e+02 Score=16.05 Aligned_cols=25 Identities=24% Similarity=0.321 Sum_probs=20.3
Q ss_pred CCCcCeEEeCCeeeecHHHHHHHHH
Q psy13751 51 RRSLPALVDGDLLICDSHAINAYLV 75 (149)
Q Consensus 51 ~g~VP~L~d~g~~l~ES~aI~~YL~ 75 (149)
.|.+|....|+..++....|..|+.
T Consensus 24 ~g~i~~~~~g~~~~~~~~~l~~~~~ 48 (49)
T TIGR01764 24 EGELPAYRVGRHYRIPREDVDEYLE 48 (49)
T ss_pred cCCCCeEEeCCeEEEeHHHHHHHHh
Confidence 5888988778888888888888874
No 117
>cd03030 GRX_SH3BGR Glutaredoxin (GRX) family, SH3BGR (SH3 domain binding glutamic acid-rich protein) subfamily; a recently-identified subfamily composed of SH3BGR and similar proteins possessing significant sequence similarity to GRX, but without a redox active CXXC motif. The SH3BGR gene was cloned in an effort to identify genes mapping to chromosome 21, which could be involved in the pathogenesis of congenital heart disease affecting Down syndrome newborns. Several human SH3BGR-like (SH3BGRL) genes have been identified since, mapping to different locations in the chromosome. Of these, SH3BGRL3 was identified as a tumor necrosis factor (TNF) alpha inhibitory protein and was also named TIP-B1. Upregulation of expression of SH3BGRL3 is associated with differentiation. It has been suggested that it functions as a regulator of differentiation-related signal transduction pathways.
Probab=26.02 E-value=1.9e+02 Score=18.61 Aligned_cols=54 Identities=24% Similarity=0.286 Sum_probs=30.4
Q ss_pred HHHHHHHHHHhcccccccEEEecCCCCCCChhHHhhCC----CCCcCeEEeCCeeeecHHHH
Q psy13751 13 KEIAELKEEIRKKEMEISVLVTFAPGETLDTAFLKQNP----RRSLPALVDGDLLICDSHAI 70 (149)
Q Consensus 13 ~~~~~l~~~i~~~e~~~~~~v~l~~~~~~~~~~~~~nP----~g~VP~L~d~g~~l~ES~aI 70 (149)
.++..+. .-.+++|+. +.|+ .......++.+..+ ...||-+.-++..+...-.+
T Consensus 20 ~~v~~lL-~~k~I~f~e-iDI~--~d~~~r~em~~~~~~~~g~~tvPQIFi~~~~iGg~ddl 77 (92)
T cd03030 20 QEVLGFL-EAKKIEFEE-VDIS--MNEENRQWMRENVPNENGKPLPPQIFNGDEYCGDYEAF 77 (92)
T ss_pred HHHHHHH-HHCCCceEE-EecC--CCHHHHHHHHHhcCCCCCCCCCCEEEECCEEeeCHHHH
Confidence 3333333 335777776 4444 33333455665543 47999887777777665443
No 118
>PF08159 NUC153: NUC153 domain; InterPro: IPR012580 This small domain is found in a novel nucleolar family [].; GO: 0005634 nucleus
Probab=24.93 E-value=1.1e+02 Score=15.59 Aligned_cols=13 Identities=23% Similarity=0.404 Sum_probs=10.0
Q ss_pred CChhHHhhCCCCC
Q psy13751 41 LDTAFLKQNPRRS 53 (149)
Q Consensus 41 ~~~~~~~~nP~g~ 53 (149)
..++|+..||+.+
T Consensus 18 t~~~yk~~~~~~k 30 (30)
T PF08159_consen 18 TSPEYKKTNPMEK 30 (30)
T ss_pred CCHHHHhhCcccC
Confidence 4689999998753
No 119
>TIGR02189 GlrX-like_plant Glutaredoxin-like family. This family of glutaredoxin-like proteins is aparrently limited to plants. Multiple isoforms are found in A. thaliana and O.sativa.
Probab=24.91 E-value=2e+02 Score=18.51 Aligned_cols=57 Identities=14% Similarity=0.165 Sum_probs=33.6
Q ss_pred HHHHHHHHHhcccccccEEEecCCCCC-CChhHHhhCCCCCcCeEEeCCeeeecHHHHHH
Q psy13751 14 EIAELKEEIRKKEMEISVLVTFAPGET-LDTAFLKQNPRRSLPALVDGDLLICDSHAINA 72 (149)
Q Consensus 14 ~~~~l~~~i~~~e~~~~~~v~l~~~~~-~~~~~~~~nP~g~VP~L~d~g~~l~ES~aI~~ 72 (149)
+..++... .+++|+. +.|+...... ..+.+.+++...+||.+..+|..+.-...+..
T Consensus 23 ~ak~~L~~-~~i~~~~-vdid~~~~~~~~~~~l~~~tg~~tvP~Vfi~g~~iGG~ddl~~ 80 (99)
T TIGR02189 23 VVKRLLLT-LGVNPAV-HEIDKEPAGKDIENALSRLGCSPAVPAVFVGGKLVGGLENVMA 80 (99)
T ss_pred HHHHHHHH-cCCCCEE-EEcCCCccHHHHHHHHHHhcCCCCcCeEEECCEEEcCHHHHHH
Confidence 33343333 3677776 5555322111 11345667888999999888877776655544
No 120
>PF12622 NpwBP: mRNA biogenesis factor
Probab=24.84 E-value=37 Score=19.39 Aligned_cols=11 Identities=27% Similarity=0.277 Sum_probs=8.8
Q ss_pred hhCCCCCcCeE
Q psy13751 47 KQNPRRSLPAL 57 (149)
Q Consensus 47 ~~nP~g~VP~L 57 (149)
..||+|++|--
T Consensus 10 ~~NP~G~~P~g 20 (48)
T PF12622_consen 10 ELNPLGKPPPG 20 (48)
T ss_pred ccCCCCCCCCC
Confidence 47999999864
No 121
>PF10022 DUF2264: Uncharacterized protein conserved in bacteria (DUF2264); InterPro: IPR016624 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=23.99 E-value=69 Score=26.20 Aligned_cols=88 Identities=13% Similarity=0.114 Sum_probs=51.2
Q ss_pred CeEEeCCeeeecHHHHHHHHHHHhCCCCCCC-CCCHHHHHHHHHHHhHHhcccccccccceeeceeec---cCccchhch
Q psy13751 55 PALVDGDLLICDSHAINAYLVSAYGKNDVLY-PKDSKDRALVDQRLYFDAGEIFPTIKQIAVSPCLLV---RTHIQGVST 130 (149)
Q Consensus 55 P~L~d~g~~l~ES~aI~~YL~~~~~~~~~L~-p~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 130 (149)
+-+.+.+..+.|..+|+.-|...-. .|+ |-+..++.++..|+.-....-.+.-.-. ++..+.. ...-.+...
T Consensus 99 ~~~~~~dQ~~VEaa~la~aL~~a~~---~lW~~L~~~~k~~l~~wL~~~~~~~~~~nNW~-lF~v~v~~~L~~~G~~~d~ 174 (361)
T PF10022_consen 99 GFIGDYDQRLVEAASLALALLRAPE---WLWDPLDEEEKENLVDWLKQIRGIKPPDNNWL-LFRVMVEAFLKKVGEEYDE 174 (361)
T ss_pred CCcccchhhHhHHHHHHHHHHHCHH---HHHhhCCHHHHHHHHHHHHhcCcCCCccchhH-HHHHHHHHHHHHcCCCCcH
Confidence 3444566899999999999987643 244 4678899999999885553333222111 2221110 011112223
Q ss_pred hhHHHHHHHHHHhHcc
Q psy13751 131 HGLKDCILTLARYFLL 146 (149)
Q Consensus 131 ~~l~~~l~~le~~~~~ 146 (149)
..++..++.+++..+.
T Consensus 175 ~~i~~~l~~~e~~Y~G 190 (361)
T PF10022_consen 175 ERIDYDLERIEEWYLG 190 (361)
T ss_pred HHHHHHHHHHHHHhcc
Confidence 5677777888776543
No 122
>cd03031 GRX_GRX_like Glutaredoxin (GRX) family, GRX-like domain containing protein subfamily; composed of uncharacterized eukaryotic proteins containing a GRX-like domain having only one conserved cysteine, aligning to the C-terminal cysteine of the CXXC motif of GRXs. This subfamily is predominantly composed of plant proteins. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins via a redox active CXXC motif using a similar dithiol mechanism employed by TRXs. GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. Proteins containing only the C-terminal cysteine are generally redox inactive.
Probab=23.32 E-value=2.7e+02 Score=19.60 Aligned_cols=49 Identities=6% Similarity=0.007 Sum_probs=29.5
Q ss_pred HhcccccccEEEecCCCCCCChhHHhhCC----CCCcCeEEeCCeeeecHHHHHHH
Q psy13751 22 IRKKEMEISVLVTFAPGETLDTAFLKQNP----RRSLPALVDGDLLICDSHAINAY 73 (149)
Q Consensus 22 i~~~e~~~~~~v~l~~~~~~~~~~~~~nP----~g~VP~L~d~g~~l~ES~aI~~Y 73 (149)
-.+++|+. +|+.......+++.++.. ..+||.+..+|..|.....+.+.
T Consensus 28 ~~~V~~~e---~DVs~~~~~~~EL~~~~g~~~~~~tvPqVFI~G~~IGG~del~~L 80 (147)
T cd03031 28 SFRVKFDE---RDVSMDSGFREELRELLGAELKAVSLPRVFVDGRYLGGAEEVLRL 80 (147)
T ss_pred HCCCcEEE---EECCCCHHHHHHHHHHhCCCCCCCCCCEEEECCEEEecHHHHHHH
Confidence 34566655 454332222345555544 37999998888888877666664
No 123
>PF14497 GST_C_3: Glutathione S-transferase, C-terminal domain; PDB: 3AY8_A 2UZ8_B 1V2A_C 2HNL_A 2YV9_B 3H1N_A 3FR6_A 1Q4J_B 1PA3_B 1OKT_B ....
Probab=22.47 E-value=66 Score=20.28 Aligned_cols=50 Identities=20% Similarity=0.200 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHhHHhcccccccccceeeceeeccCccchhchhhHHHHHHHHHHhHc
Q psy13751 89 SKDRALVDQRLYFDAGEIFPTIKQIAVSPCLLVRTHIQGVSTHGLKDCILTLARYFL 145 (149)
Q Consensus 89 ~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~~~ 145 (149)
+..++.+++|++|.. .+... ... ........+.....+.+.+..+++.+-
T Consensus 3 ~~~~a~i~~W~~f~~-----~~~~~-~~~-~~~~~~~~~~~~~~~~~~l~~l~~~L~ 52 (99)
T PF14497_consen 3 PYWRALIDRWLDFSV-----AFRRR-KAR-LEKDEASGDFSREELPKALKILEKHLA 52 (99)
T ss_dssp -TTHHHHHHHHH-GH-----CCHCC-HCH-HHHHCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhccc-----hhhhH-HHH-HHHhhhhHHhhHHHHHHHHHHHHHHHH
Confidence 456788889999661 11111 010 112233445567778888888887763
No 124
>PF14834 GST_C_4: Glutathione S-transferase, C-terminal domain; PDB: 3BBY_A.
Probab=20.97 E-value=1.1e+02 Score=20.99 Aligned_cols=54 Identities=11% Similarity=0.124 Sum_probs=28.5
Q ss_pred CHHHHHHHHHHHhHHhcccccccccceeeceeecc---CccchhchhhHHHHHHHHHH
Q psy13751 88 DSKDRALVDQRLYFDAGEIFPTIKQIAVSPCLLVR---THIQGVSTHGLKDCILTLAR 142 (149)
Q Consensus 88 ~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~l~~le~ 142 (149)
|..+||+.++...|..+.|.+.=... -....+.+ .+-.+.......+.....++
T Consensus 1 D~~~RArAR~vqAwlrSdf~~lR~Er-pt~vvf~~~~~~pLs~~a~~~a~kL~~~a~~ 57 (117)
T PF14834_consen 1 DRQERARARQVQAWLRSDFMALRQER-PTNVVFRGARKPPLSEAAQAAAQKLIAVAER 57 (117)
T ss_dssp SHHHHHHHHHHHHHHHHS-HHHHHHS--THHHHS--------HHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcccHHHHhhC-ChhhhhcCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 46789999999999999997753222 11112222 22334445555555555444
No 125
>PF12728 HTH_17: Helix-turn-helix domain
Probab=20.43 E-value=1.7e+02 Score=15.99 Aligned_cols=28 Identities=11% Similarity=0.188 Sum_probs=22.3
Q ss_pred CCCCcCeEEeCCeeeecHHHHHHHHHHH
Q psy13751 50 PRRSLPALVDGDLLICDSHAINAYLVSA 77 (149)
Q Consensus 50 P~g~VP~L~d~g~~l~ES~aI~~YL~~~ 77 (149)
-.|.+|....|+...+.-..|.+|+.++
T Consensus 23 ~~g~i~~~~~g~~~~~~~~~l~~~~~~~ 50 (51)
T PF12728_consen 23 RQGKIPPFKIGRKWRIPKSDLDRWLERR 50 (51)
T ss_pred HcCCCCeEEeCCEEEEeHHHHHHHHHhC
Confidence 3678888887788888888888888753
No 126
>cd03192 GST_C_Sigma_like GST_C family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi, and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition
Probab=20.36 E-value=56 Score=20.59 Aligned_cols=52 Identities=10% Similarity=0.027 Sum_probs=25.3
Q ss_pred HHHHHHHHHhHHhcccccccccceeeceee--ccCccchhchhhHHHHHHHHHHhH
Q psy13751 91 DRALVDQRLYFDAGEIFPTIKQIAVSPCLL--VRTHIQGVSTHGLKDCILTLARYF 144 (149)
Q Consensus 91 ~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~le~~~ 144 (149)
+++++++|++..+ .+...+... +++... ..+...+...+.+.+.+..|++.+
T Consensus 2 e~~~v~~~~~~~~-d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l 55 (104)
T cd03192 2 EAARVDALVDTIA-DLRAEFAKY-FYEKDGEEKKEKKKEFLKEAIPKYLKKLEKIL 55 (104)
T ss_pred hHHHHHHHHHHHH-HHHHHHHHH-hhcCchHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 4677777777643 444433333 332110 012223334555666666666654
Done!