Query psy13753
Match_columns 229
No_of_seqs 247 out of 1399
Neff 7.2
Searched_HMMs 29240
Date Fri Aug 16 19:38:16 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13753.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13753hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3pfq_A PKC-B, PKC-beta, protei 99.9 9.8E-26 3.3E-30 217.7 3.7 122 3-179 36-157 (674)
2 2enz_A NPKC-theta, protein kin 99.7 2.8E-18 9.7E-23 118.3 5.3 56 1-56 9-64 (65)
3 1y8f_A UNC-13 homolog A, MUNC1 99.7 7.5E-18 2.6E-22 116.5 4.0 55 2-56 11-65 (66)
4 1ptq_A Protein kinase C delta 99.7 9.7E-18 3.3E-22 109.5 4.0 50 5-54 1-50 (50)
5 2enn_A NPKC-theta, protein kin 99.7 1.6E-17 5.5E-22 118.2 4.8 56 2-57 21-76 (77)
6 2yuu_A NPKC-delta, protein kin 99.7 1.9E-17 6.4E-22 119.5 5.1 57 3-59 16-72 (83)
7 2db6_A SH3 and cysteine rich d 99.7 1.3E-17 4.6E-22 117.8 3.5 56 2-57 15-71 (74)
8 2eli_A Protein kinase C alpha 99.7 4.5E-17 1.5E-21 118.1 5.9 58 2-59 15-72 (85)
9 3uej_A NPKC-delta, protein kin 99.7 1.3E-17 4.5E-22 114.9 2.5 55 3-57 8-62 (65)
10 2row_A RHO-associated protein 99.6 7.6E-17 2.6E-21 116.1 3.4 56 2-57 22-82 (84)
11 2enz_A NPKC-theta, protein kin 99.6 7.3E-16 2.5E-20 106.1 5.4 55 122-177 11-65 (65)
12 2yuu_A NPKC-delta, protein kin 99.6 1.2E-15 4E-20 110.0 6.4 63 117-180 11-73 (83)
13 1ptq_A Protein kinase C delta 99.6 1.1E-15 3.7E-20 99.7 3.8 50 124-174 1-50 (50)
14 3uej_A NPKC-delta, protein kin 99.6 6.1E-16 2.1E-20 106.5 2.5 58 119-177 5-62 (65)
15 1faq_A RAF-1; transferase, ser 99.6 2.1E-15 7.1E-20 99.1 4.7 50 3-56 2-51 (52)
16 1y8f_A UNC-13 homolog A, MUNC1 99.6 1.3E-15 4.3E-20 105.2 3.0 54 122-176 12-65 (66)
17 2enn_A NPKC-theta, protein kin 99.6 1.7E-15 5.9E-20 107.7 3.7 60 117-177 17-76 (77)
18 2eli_A Protein kinase C alpha 99.5 3.2E-15 1.1E-19 108.2 4.4 58 122-180 16-73 (85)
19 2fnf_X Putative RAS effector N 99.5 4.5E-15 1.5E-19 104.2 4.3 51 2-55 21-72 (72)
20 1rfh_A RAS association (ralgds 99.5 2.2E-15 7.4E-20 101.8 2.5 51 2-55 8-59 (59)
21 2db6_A SH3 and cysteine rich d 99.5 2.2E-15 7.5E-20 106.3 2.5 57 120-177 14-71 (74)
22 4b6d_A RAC GTPase-activating p 99.5 3.6E-14 1.2E-18 96.4 4.8 56 1-57 5-60 (61)
23 2row_A RHO-associated protein 99.5 1.4E-14 4.7E-19 104.3 2.8 55 122-177 23-82 (84)
24 1rfh_A RAS association (ralgds 99.4 9.1E-14 3.1E-18 93.8 2.8 50 122-175 9-59 (59)
25 1faq_A RAF-1; transferase, ser 99.4 1.3E-13 4.5E-18 90.4 3.0 50 122-176 2-51 (52)
26 2fnf_X Putative RAS effector N 99.4 2.9E-13 1E-17 94.9 3.8 50 122-175 22-72 (72)
27 1kbe_A Kinase suppressor of RA 99.3 1.7E-12 5.8E-17 84.1 4.6 47 2-54 2-48 (49)
28 4b6d_A RAC GTPase-activating p 99.3 1.8E-12 6.1E-17 87.9 3.4 55 121-177 6-60 (61)
29 3cxl_A N-chimerin; SH2, RHO-GA 99.1 2.2E-11 7.5E-16 112.9 4.7 58 2-59 207-264 (463)
30 1kbe_A Kinase suppressor of RA 99.1 2.7E-11 9.2E-16 78.5 2.9 44 123-172 4-47 (49)
31 3ky9_A Proto-oncogene VAV; cal 99.1 4.1E-11 1.4E-15 113.9 4.4 57 2-59 516-572 (587)
32 3cxl_A N-chimerin; SH2, RHO-GA 99.1 5E-11 1.7E-15 110.4 4.7 67 122-189 208-274 (463)
33 3pfq_A PKC-B, PKC-beta, protei 99.0 2E-11 6.8E-16 117.7 0.0 60 118-178 32-91 (674)
34 2vrw_B P95VAV, VAV1, proto-onc 99.0 9.8E-11 3.4E-15 106.3 4.4 56 3-59 345-400 (406)
35 2vrw_B P95VAV, VAV1, proto-onc 98.8 1.5E-09 5E-14 98.5 4.6 58 121-180 344-401 (406)
36 3ky9_A Proto-oncogene VAV; cal 98.8 2.2E-09 7.5E-14 102.0 4.3 56 121-178 516-571 (587)
37 1r79_A Diacylglycerol kinase, 98.4 4.2E-07 1.4E-11 65.1 5.1 43 135-177 38-81 (84)
38 1r79_A Diacylglycerol kinase, 97.8 1.1E-05 3.6E-10 57.8 2.9 55 3-57 26-81 (84)
39 1v5n_A PDI-like hypothetical p 93.8 0.048 1.7E-06 38.9 3.4 44 4-51 37-80 (89)
40 1v5n_A PDI-like hypothetical p 86.7 0.3 1E-05 34.7 2.0 34 135-171 47-80 (89)
41 2ct0_A Non-SMC element 1 homol 73.2 0.96 3.3E-05 30.9 0.7 34 13-50 13-46 (74)
42 3nw0_A Non-structural maintena 68.8 1.7 6E-05 36.2 1.5 33 14-50 179-211 (238)
43 3ddc_B RAS association domain- 61.7 3.2 0.00011 32.7 1.7 15 205-219 34-48 (163)
44 3nw0_A Non-structural maintena 58.6 3.6 0.00012 34.3 1.5 31 135-169 180-210 (238)
45 2ct0_A Non-SMC element 1 homol 53.9 3.8 0.00013 27.9 0.8 29 136-168 16-44 (74)
46 1wev_A Riken cDNA 1110020M19; 47.1 14 0.00049 25.6 2.9 35 15-49 16-50 (88)
47 2yt5_A Metal-response element- 45.6 15 0.00051 23.7 2.7 35 15-49 6-40 (66)
48 2csz_A Synaptotagmin-like prot 44.8 10 0.00035 26.0 1.8 36 15-50 25-60 (76)
49 1wff_A Riken cDNA 2810002D23 p 43.8 15 0.00051 25.7 2.5 26 14-42 24-49 (85)
50 2csz_A Synaptotagmin-like prot 40.1 13 0.00045 25.4 1.7 36 135-170 25-60 (76)
51 3qt1_I DNA-directed RNA polyme 37.5 15 0.00052 27.8 1.9 30 13-42 22-56 (133)
52 3h0g_I DNA-directed RNA polyme 35.4 19 0.00064 26.3 2.1 29 15-43 4-37 (113)
53 1wfl_A Zinc finger protein 216 34.6 63 0.0022 21.9 4.4 25 14-42 24-48 (74)
54 2ku3_A Bromodomain-containing 33.9 18 0.0006 24.2 1.6 37 13-49 14-50 (71)
55 1mm2_A MI2-beta; PHD, zinc fin 33.7 26 0.00088 22.5 2.3 30 15-49 9-38 (61)
56 2yql_A PHD finger protein 21A; 31.9 32 0.0011 21.4 2.6 31 14-49 8-38 (56)
57 2puy_A PHD finger protein 21A; 31.8 32 0.0011 21.8 2.6 30 15-49 5-34 (60)
58 1wg2_A Zinc finger (AN1-like) 31.8 29 0.00098 22.9 2.3 25 14-42 14-38 (64)
59 2e5r_A Dystrobrevin alpha; ZZ 31.5 32 0.0011 22.3 2.5 23 14-39 10-33 (63)
60 1wfh_A Zinc finger (AN1-like) 31.5 29 0.001 22.9 2.3 26 13-42 13-38 (64)
61 1f62_A Transcription factor WS 30.5 23 0.0008 21.5 1.7 30 17-48 2-31 (51)
62 1wil_A KIAA1045 protein; ring 30.1 12 0.00042 26.2 0.3 34 15-51 15-48 (89)
63 1zbd_B Rabphilin-3A; G protein 29.2 36 0.0012 25.6 2.8 38 14-51 54-91 (134)
64 2zet_C Melanophilin; complex, 28.9 43 0.0015 25.8 3.2 38 14-51 67-104 (153)
65 1xwh_A Autoimmune regulator; P 28.1 35 0.0012 22.1 2.3 30 14-48 7-36 (66)
66 1pft_A TFIIB, PFTFIIBN; N-term 28.1 39 0.0013 20.4 2.4 28 16-43 6-35 (50)
67 3j20_Y 30S ribosomal protein S 28.0 32 0.0011 21.4 1.9 29 14-43 18-48 (50)
68 1wfp_A Zinc finger (AN1-like) 28.0 36 0.0012 23.1 2.3 25 14-42 24-48 (74)
69 2l43_A N-teminal domain from h 27.8 25 0.00085 24.4 1.6 36 14-49 24-59 (88)
70 1x4w_A Hypothetical protein FL 27.6 14 0.00048 24.7 0.2 28 13-42 13-41 (67)
71 2lri_C Autoimmune regulator; Z 27.4 25 0.00085 23.1 1.4 29 15-48 12-40 (66)
72 1dl6_A Transcription factor II 27.1 56 0.0019 20.7 3.1 34 12-45 8-43 (58)
73 2zet_C Melanophilin; complex, 26.3 32 0.0011 26.6 2.1 37 135-171 68-104 (153)
74 3h0g_L DNA-directed RNA polyme 26.3 28 0.00096 22.9 1.5 26 137-162 23-48 (63)
75 1twf_I B12.6, DNA-directed RNA 25.5 38 0.0013 24.9 2.3 30 14-43 3-37 (122)
76 1zbd_B Rabphilin-3A; G protein 24.8 35 0.0012 25.7 2.0 37 135-171 55-91 (134)
77 2l5u_A Chromodomain-helicase-D 24.4 31 0.0011 22.0 1.4 31 14-49 10-40 (61)
No 1
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.91 E-value=9.8e-26 Score=217.72 Aligned_cols=122 Identities=29% Similarity=0.556 Sum_probs=47.3
Q ss_pred CCceeEEEeeCCcccCccCcccccccccCeeeeCCCCCcccccccccccCCCccchhhhhccCCccccccccCCCCCCcC
Q psy13753 3 TSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSRLLRRQKSTSEIETRVTPAVPDEE 82 (229)
Q Consensus 3 ~~H~f~~~~~~~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~v~~~C~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 82 (229)
++|.|.+++|.+||||++|+++|||+.+|||+|.+|+++||++|..+|+..|........ .+
T Consensus 36 ~~H~f~~~~~~~p~~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~c~~~~~~~~------------------~~ 97 (674)
T 3pfq_A 36 KNHKFTARFFKQPTFCSHCTDFIWGFGKQGFQCQVCSFVVHKRCHEFVTFSCPGADKGPA------------------SD 97 (674)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCceEEeeeCCCCCccccccccccccCCceeECCCCCCCcChhhcCcCcccCCCcccccc------------------cc
Confidence 589999999999999999999999999999999999999999999999999987643110 00
Q ss_pred CceeeEEeccccccceeecccccCCCCCCCCcccccccccccceeeecccCCCcccccCCCCCCCCccCceEeeeccccc
Q psy13753 83 GRLTLFITGIKVRLPYVVTFTRVPGSVSPGPTMRAAGKLSSHELKTYSRQNSPRLVVTSPGGPGGHTRQGLKCRLCKTNV 162 (229)
Q Consensus 83 ~~~~~~i~~~~v~~P~~~~~~~~p~s~s~~p~~r~~~~~~~h~~~~~~~~~~pt~C~~C~~~i~g~~~qg~~C~~C~~~~ 162 (229)
...+ .|+|...++ ..+++|++|+++|||+.+||++|.+|++++
T Consensus 98 ----------~~~~--------------------------~h~~~~~~~-~~~~~C~~C~~~l~g~~~qg~~C~~C~~~~ 140 (674)
T 3pfq_A 98 ----------DPRS--------------------------KHKFKIHTY-SSPTFCDHCGSLLYGLIHQGMKCDTCMMNV 140 (674)
T ss_dssp ----------------------------------------CCCCCEECC-SSCCCCSSSCSCCBBSSSCEECCSSSCCCB
T ss_pred ----------cccC--------------------------CcceeecCC-CCCCCCCccccccchhhcCccccccCCcch
Confidence 0011 245544343 368999999999999999999999999999
Q ss_pred chhccccCCCCCCcChh
Q psy13753 163 HVDCQEKVPAKCQPKSR 179 (229)
Q Consensus 163 H~~C~~~v~~~C~~~~~ 179 (229)
|++|...|+..|+.+..
T Consensus 141 H~~C~~~v~~~C~~d~~ 157 (674)
T 3pfq_A 141 HKRCVMNVPSLCGTDHT 157 (674)
T ss_dssp CSSTTSSSCCCSSSCSS
T ss_pred hhhhhhccCcccccccc
Confidence 99999999999987643
No 2
>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=99.73 E-value=2.8e-18 Score=118.27 Aligned_cols=56 Identities=46% Similarity=0.883 Sum_probs=53.4
Q ss_pred CCCCceeEEEeeCCcccCccCcccccccccCeeeeCCCCCcccccccccccCCCcc
Q psy13753 1 MDTSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQP 56 (229)
Q Consensus 1 ~~~~H~f~~~~~~~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~v~~~C~~ 56 (229)
++.+|.|.+++|..||+|++|+++|||+.+|||+|++|++++|++|..+|+.+|..
T Consensus 9 ~~~~H~F~~~~~~~pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~v~~~C~~ 64 (65)
T 2enz_A 9 IDMPHRFKVYNYKSPTFCEHCGTLLWGLARQGLKCDACGMNVHHRCQTKVANLCGI 64 (65)
T ss_dssp CCCCCCEEECCCCSCCBCSSSCCBCCCSSSCSEEESSSCCEECTTTTTTSCSCTTT
T ss_pred CCCCCccEeEcCCCCcCchhcChhheecCCcccccCCCCCccCHhHHhhCcCcCCC
Confidence 46799999999999999999999999999999999999999999999999999964
No 3
>1y8f_A UNC-13 homolog A, MUNC13-1; cysteine-rich domain, C1-domain, zinc-binding domain, endocytosis/exocytosis,signaling protein complex; NMR {Rattus norvegicus}
Probab=99.70 E-value=7.5e-18 Score=116.49 Aligned_cols=55 Identities=33% Similarity=0.689 Sum_probs=50.4
Q ss_pred CCCceeEEEeeCCcccCccCcccccccccCeeeeCCCCCcccccccccccCCCcc
Q psy13753 2 DTSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQP 56 (229)
Q Consensus 2 ~~~H~f~~~~~~~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~v~~~C~~ 56 (229)
..+|.|.+++|..||+|++|+++|||+.+|||+|++|++++|++|..+|+.+|..
T Consensus 11 ~~~H~F~~~~~~~pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~v~~~C~~ 65 (66)
T 1y8f_A 11 GIQHNFEVWTATTPTYCYECEGLLWGIARQGMRCTECGVKCHEKCQDLLNADCKL 65 (66)
T ss_dssp --CCCEEEEECSSCCCCTTTCCCCCSSCCEEEEETTTCCEECTTHHHHSCCCC--
T ss_pred CCCcccEeeeCCCCcChhhcChhhcccCcceeEcCCCCCeeCHHHHhhCcCcCCC
Confidence 4689999999999999999999999999999999999999999999999999964
No 4
>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A*
Probab=99.69 E-value=9.7e-18 Score=109.49 Aligned_cols=50 Identities=48% Similarity=0.941 Sum_probs=48.7
Q ss_pred ceeEEEeeCCcccCccCcccccccccCeeeeCCCCCcccccccccccCCC
Q psy13753 5 HQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKC 54 (229)
Q Consensus 5 H~f~~~~~~~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~v~~~C 54 (229)
|.|.+++|..|++|++|+++|||+.+|||+|++|++++|++|..+++.+|
T Consensus 1 H~F~~~~~~~pt~C~~C~~~l~g~~~qg~~C~~C~~~~H~~C~~~v~~~C 50 (50)
T 1ptq_A 1 HRFKVYNYMSPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREKVANLC 50 (50)
T ss_dssp CCEEEECCSSCCBCTTTCCBCCSSSSCEEEETTTCCEECHHHHTTSCSCC
T ss_pred CCCEeecCCCCCCcCCCCceeeccCCccCEeCCCCCeECHHHhhhcCCCC
Confidence 89999999999999999999999999999999999999999999999887
No 5
>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=99.69 E-value=1.6e-17 Score=118.24 Aligned_cols=56 Identities=32% Similarity=0.739 Sum_probs=53.2
Q ss_pred CCCceeEEEeeCCcccCccCcccccccccCeeeeCCCCCcccccccccccCCCccc
Q psy13753 2 DTSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPK 57 (229)
Q Consensus 2 ~~~H~f~~~~~~~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~v~~~C~~~ 57 (229)
..+|.|.+++|..||+|++|+++|||+.+|||+|++|++++|++|...|+.+|...
T Consensus 21 ~~~H~F~~~~f~~pt~C~~C~~~lwGl~kqG~~C~~C~~~~Hk~C~~~v~~~C~~~ 76 (77)
T 2enn_A 21 VKCHEFTATFFPQPTFCSVCHEFVWGLNKQGYQCRQCNAAIHKKCIDKVIAKCTGS 76 (77)
T ss_dssp SSSCEEEEECCSSCEECSSSCCEECCTTCCEEECSSSCCEEESGGGSSCCSCCCCC
T ss_pred CCCCccEEEcCCCCcCccccChhhccccccccCcCCCCCcCCHhHHhhCcCCCCCC
Confidence 46899999999999999999999999999999999999999999999999999753
No 6
>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.68 E-value=1.9e-17 Score=119.50 Aligned_cols=57 Identities=28% Similarity=0.728 Sum_probs=54.3
Q ss_pred CCceeEEEeeCCcccCccCcccccccccCeeeeCCCCCcccccccccccCCCccchh
Q psy13753 3 TSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSR 59 (229)
Q Consensus 3 ~~H~f~~~~~~~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~v~~~C~~~~~ 59 (229)
.+|.|.+++|..|++|++|+++|||+.+|||+|.+|++++|++|...|+.+|.....
T Consensus 16 ~~H~F~~~~~~~pt~C~~C~~~lwGl~kqg~~C~~C~~~~Hk~C~~~v~~~C~~~~~ 72 (83)
T 2yuu_A 16 KNHEFIATFFGQPTFCSVCKDFVWGLNKQGYKCRQCNAAIHKKCIDKIIGRCTGTAA 72 (83)
T ss_dssp GGCCEEEECCSSCCCCSSSCCCCCSSSCCEEEETTTCCEECTTGGGTCCSCCSSCCC
T ss_pred CCCceEeEeCCCCcChhhcChhhccccccccccCCcCCeeChhhhhhCCCcCCCccc
Confidence 589999999999999999999999999999999999999999999999999987654
No 7
>2db6_A SH3 and cysteine rich domain 3; STAC3, C1 domain, cystein-rich domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.68 E-value=1.3e-17 Score=117.77 Aligned_cols=56 Identities=36% Similarity=0.819 Sum_probs=52.8
Q ss_pred CCCceeEEEeeCCcccCccCcccccccccCeeeeCCCCCcccccccccccC-CCccc
Q psy13753 2 DTSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPA-KCQPK 57 (229)
Q Consensus 2 ~~~H~f~~~~~~~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~v~~-~C~~~ 57 (229)
..+|.|+.++|..||||++|+++|||+.+|||+|++|++++|++|..+|+. +|...
T Consensus 15 ~~~H~F~~~~f~~pt~C~~C~~~lwGl~kqG~~C~~C~~~~Hk~C~~~v~~~~C~~~ 71 (74)
T 2db6_A 15 DKPHKFKDHFFKKPKFCDVCARMIVLNNKFGLRCKNCKTNIHEHCQSYVEMQRCSGP 71 (74)
T ss_dssp SSBCCEEEEECSSCEECSSSCCEECHHHHEEEEESSSCCEECTTTTGGGSSSBCCCC
T ss_pred CCCCceEEeeCCCCcCchhcChhhccccCCccccCCCCCccChhHHhhCCCCcCCCC
Confidence 578999999999999999999999999999999999999999999999996 69764
No 8
>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.67 E-value=4.5e-17 Score=118.07 Aligned_cols=58 Identities=38% Similarity=0.735 Sum_probs=54.6
Q ss_pred CCCceeEEEeeCCcccCccCcccccccccCeeeeCCCCCcccccccccccCCCccchh
Q psy13753 2 DTSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSR 59 (229)
Q Consensus 2 ~~~H~f~~~~~~~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~v~~~C~~~~~ 59 (229)
..+|.|.+++|..|+||++|+++|||+.+|||+|.+|++++|++|...|+.+|.....
T Consensus 15 ~~~H~F~~~~~~~pt~C~~C~~~l~Gl~kqG~~C~~C~~~~Hk~C~~~v~~~C~~~~~ 72 (85)
T 2eli_A 15 RSKHKFKIHTYGSPTFCDHCGSLLYGLIHQGMKCDTCDMNVHKQCVINVPSLCGMDHT 72 (85)
T ss_dssp TTSCCCEEECCSSCCBCSSSCCBCCCSSSCEEECSSSCCEEETTTTTTSCSCCCCCCC
T ss_pred CCCcccEeeeCCCCcCCcccCccccccccCCCcCCCcCCccCHhHHhhcCCcCCcchh
Confidence 3689999999999999999999999999999999999999999999999999987644
No 9
>3uej_A NPKC-delta, protein kinase C delta type; proteine kinase cdelta, phosphotransferase, anesthetic bindi metal binding protein; 1.30A {Mus musculus} PDB: 3ugi_A 3ugl_A 3uey_A 3ugd_A 3uff_A 1ptq_A 1ptr_A*
Probab=99.67 E-value=1.3e-17 Score=114.90 Aligned_cols=55 Identities=45% Similarity=0.837 Sum_probs=52.4
Q ss_pred CCceeEEEeeCCcccCccCcccccccccCeeeeCCCCCcccccccccccCCCccc
Q psy13753 3 TSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPK 57 (229)
Q Consensus 3 ~~H~f~~~~~~~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~v~~~C~~~ 57 (229)
++|.|.+++|..|++|++|+++|||+.+|||+|++|++++|++|..+|+.+|...
T Consensus 8 ~~H~F~~~~~~~pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~v~~~C~~~ 62 (65)
T 3uej_A 8 GSHRFKVYNYMSPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREKVANLCEFI 62 (65)
T ss_dssp EECCEEEECCSSCCBCTTTCCBCCSSSSCEEEETTTCCEECHHHHTTSCSEEEEE
T ss_pred CCceEEeEeCCCCCcccccChhhhccCceeeECCCCCCeEchhHhhhCCCcCCCc
Confidence 5799999999999999999999999999999999999999999999999999753
No 10
>2row_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=99.63 E-value=7.6e-17 Score=116.13 Aligned_cols=56 Identities=27% Similarity=0.544 Sum_probs=52.8
Q ss_pred CCCceeEEEeeCCcccCccCcccccccccC--eeeeCCCCCcccccccc---cccCCCccc
Q psy13753 2 DTSHQFQEYTYKKITPCDICSQVLRGHTRQ--GLKCRLCKTNVHVDCQE---KVPAKCQPK 57 (229)
Q Consensus 2 ~~~H~f~~~~~~~pt~C~~C~~~l~Gl~~q--gl~C~~C~~~~Hk~C~~---~v~~~C~~~ 57 (229)
..||.|.+++|..||||++|+++|||+++| ||+|.+|+++||++|.. .|+.+|..+
T Consensus 22 ~~~H~F~~~~~~~PT~Cd~C~~~lWGl~kqp~G~~C~~C~~~~HkrC~~k~~~v~~~C~~~ 82 (84)
T 2row_A 22 HKGHEFIPTLYHFPTNCEACMKPLWHMFKPPPALECRRCHIKCHKDHMDKKEEIIAPCKVY 82 (84)
T ss_dssp ETTEEEEEECCSSCEECSSSSSEECCSSSCCCEEEESSSCCEEEHHHHHHTCTTCCCCSTT
T ss_pred cCCcceEeEcCCCCcchhhcCHhhhccccCCCCCEecCCCCccchhHhCCccccccccCcC
Confidence 468999999999999999999999999998 99999999999999999 799999754
No 11
>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=99.60 E-value=7.3e-16 Score=106.09 Aligned_cols=55 Identities=38% Similarity=0.600 Sum_probs=49.2
Q ss_pred cccceeeecccCCCcccccCCCCCCCCccCceEeeecccccchhccccCCCCCCcC
Q psy13753 122 SSHELKTYSRQNSPRLVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPK 177 (229)
Q Consensus 122 ~~h~~~~~~~~~~pt~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~C~~~ 177 (229)
.+|+|...++ ..|++|++|+++|||+.+||++|.+|++++|++|..+|+.+|+.+
T Consensus 11 ~~H~F~~~~~-~~pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~v~~~C~~~ 65 (65)
T 2enz_A 11 MPHRFKVYNY-KSPTFCEHCGTLLWGLARQGLKCDACGMNVHHRCQTKVANLCGIN 65 (65)
T ss_dssp CCCCEEECCC-CSCCBCSSSCCBCCCSSSCSEEESSSCCEECTTTTTTSCSCTTTC
T ss_pred CCCccEeEcC-CCCcCchhcChhheecCCcccccCCCCCccCHhHHhhCcCcCCCC
Confidence 3677876665 469999999999999999999999999999999999999999863
No 12
>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.60 E-value=1.2e-15 Score=110.05 Aligned_cols=63 Identities=22% Similarity=0.430 Sum_probs=55.1
Q ss_pred ccccccccceeeecccCCCcccccCCCCCCCCccCceEeeecccccchhccccCCCCCCcChhh
Q psy13753 117 AAGKLSSHELKTYSRQNSPRLVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSRL 180 (229)
Q Consensus 117 ~~~~~~~h~~~~~~~~~~pt~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~C~~~~~~ 180 (229)
+++...+|.|...++ ..|++|++|+++|||+.+|||+|.+|++++|++|..+|+..|......
T Consensus 11 k~~~~~~H~F~~~~~-~~pt~C~~C~~~lwGl~kqg~~C~~C~~~~Hk~C~~~v~~~C~~~~~~ 73 (83)
T 2yuu_A 11 KIHYIKNHEFIATFF-GQPTFCSVCKDFVWGLNKQGYKCRQCNAAIHKKCIDKIIGRCTGTAAN 73 (83)
T ss_dssp CEECGGGCCEEEECC-SSCCCCSSSCCCCCSSSCCEEEETTTCCEECTTGGGTCCSCCSSCCCC
T ss_pred hCcccCCCceEeEeC-CCCcChhhcChhhccccccccccCCcCCeeChhhhhhCCCcCCCcccc
Confidence 455567899987766 479999999999999999999999999999999999999999876533
No 13
>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A*
Probab=99.57 E-value=1.1e-15 Score=99.67 Aligned_cols=50 Identities=40% Similarity=0.659 Sum_probs=44.4
Q ss_pred cceeeecccCCCcccccCCCCCCCCccCceEeeecccccchhccccCCCCC
Q psy13753 124 HELKTYSRQNSPRLVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQEKVPAKC 174 (229)
Q Consensus 124 h~~~~~~~~~~pt~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~C 174 (229)
|+|...++ ..|++|++|+++|||+.+||++|.+|++++|++|.+.|+..|
T Consensus 1 H~F~~~~~-~~pt~C~~C~~~l~g~~~qg~~C~~C~~~~H~~C~~~v~~~C 50 (50)
T 1ptq_A 1 HRFKVYNY-MSPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREKVANLC 50 (50)
T ss_dssp CCEEEECC-SSCCBCTTTCCBCCSSSSCEEEETTTCCEECHHHHTTSCSCC
T ss_pred CCCEeecC-CCCCCcCCCCceeeccCCccCEeCCCCCeECHHHhhhcCCCC
Confidence 45555554 469999999999999999999999999999999999999887
No 14
>3uej_A NPKC-delta, protein kinase C delta type; proteine kinase cdelta, phosphotransferase, anesthetic bindi metal binding protein; 1.30A {Mus musculus} PDB: 3ugi_A 3ugl_A 3uey_A 3ugd_A 3uff_A 1ptq_A 1ptr_A*
Probab=99.57 E-value=6.1e-16 Score=106.46 Aligned_cols=58 Identities=36% Similarity=0.573 Sum_probs=51.4
Q ss_pred ccccccceeeecccCCCcccccCCCCCCCCccCceEeeecccccchhccccCCCCCCcC
Q psy13753 119 GKLSSHELKTYSRQNSPRLVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPK 177 (229)
Q Consensus 119 ~~~~~h~~~~~~~~~~pt~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~C~~~ 177 (229)
+..++|+|...++ ..|++|++|+++|||+.+||++|.+|++++|++|..+|+.+|+..
T Consensus 5 ~~~~~H~F~~~~~-~~pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~v~~~C~~~ 62 (65)
T 3uej_A 5 ASVGSHRFKVYNY-MSPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREKVANLCEFI 62 (65)
T ss_dssp EEEEECCEEEECC-SSCCBCTTTCCBCCSSSSCEEEETTTCCEECHHHHTTSCSEEEEE
T ss_pred eEeCCceEEeEeC-CCCCcccccChhhhccCceeeECCCCCCeEchhHhhhCCCcCCCc
Confidence 3445788887665 479999999999999999999999999999999999999999764
No 15
>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A
Probab=99.56 E-value=2.1e-15 Score=99.15 Aligned_cols=50 Identities=38% Similarity=0.875 Sum_probs=48.1
Q ss_pred CCceeEEEeeCCcccCccCcccccccccCeeeeCCCCCcccccccccccCCCcc
Q psy13753 3 TSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQP 56 (229)
Q Consensus 3 ~~H~f~~~~~~~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~v~~~C~~ 56 (229)
++|.|..++|..|++|++|+++|| |||+|++|++++|++|..+++.+|.+
T Consensus 2 ~~H~F~~~~~~~pt~C~~C~~~l~----qG~~C~~C~~~~H~~C~~~v~~~C~~ 51 (52)
T 1faq_A 2 TTHNFARKTFLKLAFCDICQKFLL----NGFRCQTCGYKFHEHCSTKVPTMCVD 51 (52)
T ss_dssp CCCCCEEECCSSCEECTTSSSEEC----SEEECTTTTCCBCSTTSSSSSSCCCC
T ss_pred CCceeEeEeCCCCcCCCCcccccc----cCCEeCCCCCeEChhHHhhCcCcCCC
Confidence 589999999999999999999999 99999999999999999999999975
No 16
>1y8f_A UNC-13 homolog A, MUNC13-1; cysteine-rich domain, C1-domain, zinc-binding domain, endocytosis/exocytosis,signaling protein complex; NMR {Rattus norvegicus}
Probab=99.55 E-value=1.3e-15 Score=105.23 Aligned_cols=54 Identities=26% Similarity=0.589 Sum_probs=47.0
Q ss_pred cccceeeecccCCCcccccCCCCCCCCccCceEeeecccccchhccccCCCCCCc
Q psy13753 122 SSHELKTYSRQNSPRLVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQEKVPAKCQP 176 (229)
Q Consensus 122 ~~h~~~~~~~~~~pt~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~C~~ 176 (229)
.+|+|...++ ..|++|++|+++|||+.+||++|.+|++++|++|.++|+.+|.+
T Consensus 12 ~~H~F~~~~~-~~pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~v~~~C~~ 65 (66)
T 1y8f_A 12 IQHNFEVWTA-TTPTYCYECEGLLWGIARQGMRCTECGVKCHEKCQDLLNADCKL 65 (66)
T ss_dssp -CCCEEEEEC-SSCCCCTTTCCCCCSSCCEEEEETTTCCEECTTHHHHSCCCC--
T ss_pred CCcccEeeeC-CCCcChhhcChhhcccCcceeEcCCCCCeeCHHHHhhCcCcCCC
Confidence 3578876665 47999999999999999999999999999999999999999975
No 17
>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=99.55 E-value=1.7e-15 Score=107.69 Aligned_cols=60 Identities=27% Similarity=0.478 Sum_probs=53.0
Q ss_pred ccccccccceeeecccCCCcccccCCCCCCCCccCceEeeecccccchhccccCCCCCCcC
Q psy13753 117 AAGKLSSHELKTYSRQNSPRLVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPK 177 (229)
Q Consensus 117 ~~~~~~~h~~~~~~~~~~pt~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~C~~~ 177 (229)
.++..++|.|...++ ..||+|++|.++|||+.+||++|.+|++++|++|.+.|+.+|...
T Consensus 17 ~~~~~~~H~F~~~~f-~~pt~C~~C~~~lwGl~kqG~~C~~C~~~~Hk~C~~~v~~~C~~~ 76 (77)
T 2enn_A 17 KVHHVKCHEFTATFF-PQPTFCSVCHEFVWGLNKQGYQCRQCNAAIHKKCIDKVIAKCTGS 76 (77)
T ss_dssp CCEESSSCEEEEECC-SSCEECSSSCCEECCTTCCEEECSSSCCEEESGGGSSCCSCCCCC
T ss_pred ccccCCCCccEEEcC-CCCcCccccChhhccccccccCcCCCCCcCCHhHHhhCcCCCCCC
Confidence 345567899987665 479999999999999999999999999999999999999999763
No 18
>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.54 E-value=3.2e-15 Score=108.22 Aligned_cols=58 Identities=31% Similarity=0.494 Sum_probs=51.1
Q ss_pred cccceeeecccCCCcccccCCCCCCCCccCceEeeecccccchhccccCCCCCCcChhh
Q psy13753 122 SSHELKTYSRQNSPRLVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSRL 180 (229)
Q Consensus 122 ~~h~~~~~~~~~~pt~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~C~~~~~~ 180 (229)
.+|+|...++ ..|++|++|+++|||+.+||++|.+|++++|++|..+|+..|+.+...
T Consensus 16 ~~H~F~~~~~-~~pt~C~~C~~~l~Gl~kqG~~C~~C~~~~Hk~C~~~v~~~C~~~~~e 73 (85)
T 2eli_A 16 SKHKFKIHTY-GSPTFCDHCGSLLYGLIHQGMKCDTCDMNVHKQCVINVPSLCGMDHTE 73 (85)
T ss_dssp TSCCCEEECC-SSCCBCSSSCCBCCCSSSCEEECSSSCCEEETTTTTTSCSCCCCCCCC
T ss_pred CCcccEeeeC-CCCcCCcccCccccccccCCCcCCCcCCccCHhHHhhcCCcCCcchhh
Confidence 3577776665 479999999999999999999999999999999999999999886544
No 19
>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus}
Probab=99.53 E-value=4.5e-15 Score=104.20 Aligned_cols=51 Identities=29% Similarity=0.662 Sum_probs=48.2
Q ss_pred CCCceeEE-EeeCCcccCccCcccccccccCeeeeCCCCCcccccccccccCCCc
Q psy13753 2 DTSHQFQE-YTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQ 55 (229)
Q Consensus 2 ~~~H~f~~-~~~~~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~v~~~C~ 55 (229)
..+|.|.+ ++|..||||++|+++| ++|||+|.+|+|++|++|..+|+..|.
T Consensus 21 ~~~H~F~~~~~~~~pt~C~~C~~~l---~~qG~kC~~C~~~cHkkC~~~V~~~C~ 72 (72)
T 2fnf_X 21 GEGHRFVELALRGGPGWCDLCGREV---LRQALRCANCKFTCHSECRSLIQLDCR 72 (72)
T ss_dssp CSSCCCEECCCCSSCCBCTTTSSBC---SSCCEECTTSSCEECTGGGGGCCSCCC
T ss_pred CCCCccceeecCCCCcchhhhhHHH---HhCcCccCCCCCeechhhhccCcCCCC
Confidence 47899999 9999999999999999 589999999999999999999999884
No 20
>1rfh_A RAS association (ralgds/AF-6) domain family 5; zinc, signal transduction, apoptosis, cysteine rich domain, metal binding protein; NMR {Mus musculus}
Probab=99.53 E-value=2.2e-15 Score=101.83 Aligned_cols=51 Identities=29% Similarity=0.662 Sum_probs=48.2
Q ss_pred CCCceeEE-EeeCCcccCccCcccccccccCeeeeCCCCCcccccccccccCCCc
Q psy13753 2 DTSHQFQE-YTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQ 55 (229)
Q Consensus 2 ~~~H~f~~-~~~~~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~v~~~C~ 55 (229)
..+|.|.+ ++|..||||++|+++| ++|||+|++|++++|++|..+|+.+|.
T Consensus 8 ~~~H~F~~~~~~~~pt~C~~C~~~i---~kqg~kC~~C~~~cH~kC~~~v~~~C~ 59 (59)
T 1rfh_A 8 GEGHRFVELALRGGPGWCDLCGREV---LRQALRCANCKFTCHSECRSLIQLDCR 59 (59)
T ss_dssp CSSCCCEECCCSSCCEECTTTCSEE---CSCCEECTTTSCEECHHHHTTCCCCCC
T ss_pred CCCCcCeeeeccCCCeEchhcchhh---hhCccEeCCCCCeEehhhhhhCcCCCC
Confidence 57999999 9999999999999999 489999999999999999999999884
No 21
>2db6_A SH3 and cysteine rich domain 3; STAC3, C1 domain, cystein-rich domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.53 E-value=2.2e-15 Score=106.34 Aligned_cols=57 Identities=26% Similarity=0.463 Sum_probs=50.5
Q ss_pred cccccceeeecccCCCcccccCCCCCCCCccCceEeeecccccchhccccCCC-CCCcC
Q psy13753 120 KLSSHELKTYSRQNSPRLVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQEKVPA-KCQPK 177 (229)
Q Consensus 120 ~~~~h~~~~~~~~~~pt~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~-~C~~~ 177 (229)
...+|+|...++ ..||+|++|+++|||+.+||++|.+|++++|++|..+|+. .|...
T Consensus 14 ~~~~H~F~~~~f-~~pt~C~~C~~~lwGl~kqG~~C~~C~~~~Hk~C~~~v~~~~C~~~ 71 (74)
T 2db6_A 14 NDKPHKFKDHFF-KKPKFCDVCARMIVLNNKFGLRCKNCKTNIHEHCQSYVEMQRCSGP 71 (74)
T ss_dssp CSSBCCEEEEEC-SSCEECSSSCCEECHHHHEEEEESSSCCEECTTTTGGGSSSBCCCC
T ss_pred cCCCCceEEeeC-CCCcCchhcChhhccccCCccccCCCCCccChhHHhhCCCCcCCCC
Confidence 446789987776 4799999999999999999999999999999999999996 58764
No 22
>4b6d_A RAC GTPase-activating protein 1; signaling protein, cytokinesis, plasma membrane, phospholipi centralspindlin, spindle midzone, central spindle; 2.20A {Homo sapiens}
Probab=99.47 E-value=3.6e-14 Score=96.36 Aligned_cols=56 Identities=29% Similarity=0.631 Sum_probs=51.6
Q ss_pred CCCCceeEEEeeCCcccCccCcccccccccCeeeeCCCCCcccccccccccCCCccc
Q psy13753 1 MDTSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPK 57 (229)
Q Consensus 1 ~~~~H~f~~~~~~~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~v~~~C~~~ 57 (229)
+..+|.|+++++.+|++|++|++.|| +.+|||+|.+|++++|++|.+.++.+|.++
T Consensus 5 ~~~~H~F~~kt~~~~~~C~~Cg~~i~-~gkq~~kC~dC~~~cH~~C~~~~~~~C~p~ 60 (61)
T 4b6d_A 5 SMRLHDFVSKTVIKPESCVPCGKRIK-FGKLSLKCRDCRVVSHPECRDRCPLPCIPT 60 (61)
T ss_dssp CBCCCCEEEEECCSCEECTTTCCEEC-TTCEEEEESSSSCEECGGGGGGSCSSCCCC
T ss_pred cccceeEEeeeccCCcccccccCEEE-EeeEeeECCCCCCeEchhHhhcCCCCCCCC
Confidence 35789999999999999999999885 889999999999999999999999999753
No 23
>2row_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=99.47 E-value=1.4e-14 Score=104.32 Aligned_cols=55 Identities=20% Similarity=0.281 Sum_probs=49.4
Q ss_pred cccceeeecccCCCcccccCCCCCCCCccC--ceEeeecccccchhccc---cCCCCCCcC
Q psy13753 122 SSHELKTYSRQNSPRLVVTSPGGPGGHTRQ--GLKCRLCKTNVHVDCQE---KVPAKCQPK 177 (229)
Q Consensus 122 ~~h~~~~~~~~~~pt~C~~C~~~i~g~~~q--g~~C~~C~~~~H~~C~~---~v~~~C~~~ 177 (229)
.+|.|...++ ..||+|++|+++|||+.+| ||+|..|+++||++|.+ .|+..|+..
T Consensus 23 ~~H~F~~~~~-~~PT~Cd~C~~~lWGl~kqp~G~~C~~C~~~~HkrC~~k~~~v~~~C~~~ 82 (84)
T 2row_A 23 KGHEFIPTLY-HFPTNCEACMKPLWHMFKPPPALECRRCHIKCHKDHMDKKEEIIAPCKVY 82 (84)
T ss_dssp TTEEEEEECC-SSCEECSSSSSEECCSSSCCCEEEESSSCCEEEHHHHHHTCTTCCCCSTT
T ss_pred CCcceEeEcC-CCCcchhhcCHhhhccccCCCCCEecCCCCccchhHhCCccccccccCcC
Confidence 4688876665 5799999999999999998 99999999999999999 799999864
No 24
>1rfh_A RAS association (ralgds/AF-6) domain family 5; zinc, signal transduction, apoptosis, cysteine rich domain, metal binding protein; NMR {Mus musculus}
Probab=99.40 E-value=9.1e-14 Score=93.79 Aligned_cols=50 Identities=24% Similarity=0.489 Sum_probs=44.6
Q ss_pred cccceee-ecccCCCcccccCCCCCCCCccCceEeeecccccchhccccCCCCCC
Q psy13753 122 SSHELKT-YSRQNSPRLVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQEKVPAKCQ 175 (229)
Q Consensus 122 ~~h~~~~-~~~~~~pt~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~C~ 175 (229)
.+|+|.. .++ ..|+||++|+++| .+||++|.+|++++|++|.++|+.+|.
T Consensus 9 ~~H~F~~~~~~-~~pt~C~~C~~~i---~kqg~kC~~C~~~cH~kC~~~v~~~C~ 59 (59)
T 1rfh_A 9 EGHRFVELALR-GGPGWCDLCGREV---LRQALRCANCKFTCHSECRSLIQLDCR 59 (59)
T ss_dssp SSCCCEECCCS-SCCEECTTTCSEE---CSCCEECTTTSCEECHHHHTTCCCCCC
T ss_pred CCCcCeeeecc-CCCeEchhcchhh---hhCccEeCCCCCeEehhhhhhCcCCCC
Confidence 4688887 565 5799999999999 599999999999999999999999984
No 25
>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A
Probab=99.39 E-value=1.3e-13 Score=90.45 Aligned_cols=50 Identities=20% Similarity=0.394 Sum_probs=44.7
Q ss_pred cccceeeecccCCCcccccCCCCCCCCccCceEeeecccccchhccccCCCCCCc
Q psy13753 122 SSHELKTYSRQNSPRLVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQEKVPAKCQP 176 (229)
Q Consensus 122 ~~h~~~~~~~~~~pt~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~C~~ 176 (229)
++|+|...++ ..|++|++|+++|| ||++|.+|++++|++|.+.|+.+|.+
T Consensus 2 ~~H~F~~~~~-~~pt~C~~C~~~l~----qG~~C~~C~~~~H~~C~~~v~~~C~~ 51 (52)
T 1faq_A 2 TTHNFARKTF-LKLAFCDICQKFLL----NGFRCQTCGYKFHEHCSTKVPTMCVD 51 (52)
T ss_dssp CCCCCEEECC-SSCEECTTSSSEEC----SEEECTTTTCCBCSTTSSSSSSCCCC
T ss_pred CCceeEeEeC-CCCcCCCCcccccc----cCCEeCCCCCeEChhHHhhCcCcCCC
Confidence 4688876665 46999999999999 99999999999999999999999975
No 26
>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus}
Probab=99.36 E-value=2.9e-13 Score=94.89 Aligned_cols=50 Identities=24% Similarity=0.489 Sum_probs=44.0
Q ss_pred cccceee-ecccCCCcccccCCCCCCCCccCceEeeecccccchhccccCCCCCC
Q psy13753 122 SSHELKT-YSRQNSPRLVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQEKVPAKCQ 175 (229)
Q Consensus 122 ~~h~~~~-~~~~~~pt~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~C~ 175 (229)
.+|+|.. .++ ..||||++|+++| .+||++|.+|+++||++|..+|+..|.
T Consensus 22 ~~H~F~~~~~~-~~pt~C~~C~~~l---~~qG~kC~~C~~~cHkkC~~~V~~~C~ 72 (72)
T 2fnf_X 22 EGHRFVELALR-GGPGWCDLCGREV---LRQALRCANCKFTCHSECRSLIQLDCR 72 (72)
T ss_dssp SSCCCEECCCC-SSCCBCTTTSSBC---SSCCEECTTSSCEECTGGGGGCCSCCC
T ss_pred CCCccceeecC-CCCcchhhhhHHH---HhCcCccCCCCCeechhhhccCcCCCC
Confidence 3678877 554 5799999999999 589999999999999999999999984
No 27
>1kbe_A Kinase suppressor of RAS; KSR, cysteine-rich domain, zinc- binding protein, signaling protein; NMR {Mus musculus} SCOP: g.49.1.1 PDB: 1kbf_A
Probab=99.31 E-value=1.7e-12 Score=84.14 Aligned_cols=47 Identities=26% Similarity=0.821 Sum_probs=42.8
Q ss_pred CCCceeEEEeeCCcccCccCcccccccccCeeeeCCCCCcccccccccccCCC
Q psy13753 2 DTSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKC 54 (229)
Q Consensus 2 ~~~H~f~~~~~~~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~v~~~C 54 (229)
..+|.|..++|. +++|++|+.+|| |||+|++|++++|++|+..++ +|
T Consensus 2 ~i~HrF~~~t~~-~t~C~~C~k~i~----~G~kC~~Ck~~cH~kC~~~vp-~c 48 (49)
T 1kbe_A 2 SVTHRFSTKSWL-SQVCNVCQKSMI----FGVKCKHCRLKCHNKCTKEAP-AC 48 (49)
T ss_dssp CCCCCEEEECCS-SCCCSSSCCSSC----CEEEETTTTEEESSSCTTTSC-CC
T ss_pred CCCcccCccCCC-CcCccccCceeE----CcCCCCCCCCccchhhcCcCC-CC
Confidence 578999999998 599999999999 799999999999999999776 44
No 28
>4b6d_A RAC GTPase-activating protein 1; signaling protein, cytokinesis, plasma membrane, phospholipi centralspindlin, spindle midzone, central spindle; 2.20A {Homo sapiens}
Probab=99.27 E-value=1.8e-12 Score=87.93 Aligned_cols=55 Identities=24% Similarity=0.527 Sum_probs=48.1
Q ss_pred ccccceeeecccCCCcccccCCCCCCCCccCceEeeecccccchhccccCCCCCCcC
Q psy13753 121 LSSHELKTYSRQNSPRLVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPK 177 (229)
Q Consensus 121 ~~~h~~~~~~~~~~pt~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~C~~~ 177 (229)
..+|+|.+.++ ..+++|++|++.|| +.+|||+|.+|++.+|++|.+.++.+|.+.
T Consensus 6 ~~~H~F~~kt~-~~~~~C~~Cg~~i~-~gkq~~kC~dC~~~cH~~C~~~~~~~C~p~ 60 (61)
T 4b6d_A 6 MRLHDFVSKTV-IKPESCVPCGKRIK-FGKLSLKCRDCRVVSHPECRDRCPLPCIPT 60 (61)
T ss_dssp BCCCCEEEEEC-CSCEECTTTCCEEC-TTCEEEEESSSSCEECGGGGGGSCSSCCCC
T ss_pred ccceeEEeeec-cCCcccccccCEEE-EeeEeeECCCCCCeEchhHhhcCCCCCCCC
Confidence 45799987665 46899999999885 889999999999999999999999999764
No 29
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=99.14 E-value=2.2e-11 Score=112.87 Aligned_cols=58 Identities=33% Similarity=0.759 Sum_probs=54.2
Q ss_pred CCCceeEEEeeCCcccCccCcccccccccCeeeeCCCCCcccccccccccCCCccchh
Q psy13753 2 DTSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSR 59 (229)
Q Consensus 2 ~~~H~f~~~~~~~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~v~~~C~~~~~ 59 (229)
...|.|..++|..|++|++|+++|||+.+||++|.+|+++||++|...++..|.....
T Consensus 207 v~~h~f~~~~~~~pt~C~~C~~~l~g~~~qg~~C~~C~~~~Hk~C~~~vp~~C~~~~~ 264 (463)
T 3cxl_A 207 EKIHNFKVHTFRGPHWCEYCANFMWGLIAQGVKCADCGLNVHKQCSKMVPNDCKPDLK 264 (463)
T ss_dssp CBCCCEEEECCSSCCBCTTTCCBCCSSSCCEEEETTTCCEECHHHHTTSCSBCCGGGG
T ss_pred CCCcceEEeecCCCCcchhhhhhhhhHHhcCeeccccCcccccccccccccccccccc
Confidence 4579999999999999999999999999999999999999999999999999987543
No 30
>1kbe_A Kinase suppressor of RAS; KSR, cysteine-rich domain, zinc- binding protein, signaling protein; NMR {Mus musculus} SCOP: g.49.1.1 PDB: 1kbf_A
Probab=99.11 E-value=2.7e-11 Score=78.45 Aligned_cols=44 Identities=25% Similarity=0.501 Sum_probs=37.9
Q ss_pred ccceeeecccCCCcccccCCCCCCCCccCceEeeecccccchhccccCCC
Q psy13753 123 SHELKTYSRQNSPRLVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQEKVPA 172 (229)
Q Consensus 123 ~h~~~~~~~~~~pt~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~ 172 (229)
+|+|...++ .+++|++|+++|| ||++|.+|++++|.+|.+.||+
T Consensus 4 ~HrF~~~t~--~~t~C~~C~k~i~----~G~kC~~Ck~~cH~kC~~~vp~ 47 (49)
T 1kbe_A 4 THRFSTKSW--LSQVCNVCQKSMI----FGVKCKHCRLKCHNKCTKEAPA 47 (49)
T ss_dssp CCCEEEECC--SSCCCSSSCCSSC----CEEEETTTTEEESSSCTTTSCC
T ss_pred CcccCccCC--CCcCccccCceeE----CcCCCCCCCCccchhhcCcCCC
Confidence 477777665 2599999999998 7999999999999999997763
No 31
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=99.09 E-value=4.1e-11 Score=113.91 Aligned_cols=57 Identities=32% Similarity=0.849 Sum_probs=50.0
Q ss_pred CCCceeEEEeeCCcccCccCcccccccccCeeeeCCCCCcccccccccccCCCccchh
Q psy13753 2 DTSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSR 59 (229)
Q Consensus 2 ~~~H~f~~~~~~~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~v~~~C~~~~~ 59 (229)
+++|.|..++|..||+|++|+.+|||+.+|||+|..|++++|++|...++ +|++...
T Consensus 516 ~~~H~F~~~~~~~~t~C~~C~~~l~gl~~qg~~C~~C~~~vHk~C~~~v~-~C~~~~~ 572 (587)
T 3ky9_A 516 ANGHDFQMFSFEETTSCKACQMLLRGTFYQGYRCHRCRASAHKECLGRVP-PCGRHGQ 572 (587)
T ss_dssp GGGCCEEEECCSSCCBCTTTCSBCCSSSCCEEEETTTCCEECSGGGGGSC-CC-----
T ss_pred ccCCceeEEeCCCCcccccccccccccccCCcCCCCCCCccchhhhhcCC-CCCCCCc
Confidence 36899999999999999999999999999999999999999999999994 9987653
No 32
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=99.09 E-value=5e-11 Score=110.44 Aligned_cols=67 Identities=27% Similarity=0.458 Sum_probs=58.8
Q ss_pred cccceeeecccCCCcccccCCCCCCCCccCceEeeecccccchhccccCCCCCCcChhhhhccCCchh
Q psy13753 122 SSHELKTYSRQNSPRLVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSRLLRRQKSTSE 189 (229)
Q Consensus 122 ~~h~~~~~~~~~~pt~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~C~~~~~~~~~~~~~~~ 189 (229)
.+|.|...++ ..|++|++|+++|||+.+||++|.+|+++||++|...++..|+++.....+.++.+.
T Consensus 208 ~~h~f~~~~~-~~pt~C~~C~~~l~g~~~qg~~C~~C~~~~Hk~C~~~vp~~C~~~~~~~~~vFG~~L 274 (463)
T 3cxl_A 208 KIHNFKVHTF-RGPHWCEYCANFMWGLIAQGVKCADCGLNVHKQCSKMVPNDCKPDLKHVKKVYSCDL 274 (463)
T ss_dssp BCCCEEEECC-SSCCBCTTTCCBCCSSSCCEEEETTTCCEECHHHHTTSCSBCCGGGGGCCCCTTSCH
T ss_pred CCcceEEeec-CCCCcchhhhhhhhhHHhcCeeccccCcccccccccccccccccccccccccccccc
Confidence 4788887665 479999999999999999999999999999999999999999988777667777654
No 33
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.04 E-value=2e-11 Score=117.74 Aligned_cols=60 Identities=22% Similarity=0.428 Sum_probs=0.0
Q ss_pred cccccccceeeecccCCCcccccCCCCCCCCccCceEeeecccccchhccccCCCCCCcCh
Q psy13753 118 AGKLSSHELKTYSRQNSPRLVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKS 178 (229)
Q Consensus 118 ~~~~~~h~~~~~~~~~~pt~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~C~~~~ 178 (229)
++..++|.|...++ ..||||++|+++|||+.+||++|..|+++||++|..+|+..|....
T Consensus 32 ~~~~~~H~f~~~~~-~~p~~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~c~~~~ 91 (674)
T 3pfq_A 32 VHEVKNHKFTARFF-KQPTFCSHCTDFIWGFGKQGFQCQVCSFVVHKRCHEFVTFSCPGAD 91 (674)
T ss_dssp -------------------------------------------------------------
T ss_pred CcccCCceEEeeeC-CCCCccccccccccccCCceeECCCCCCCcChhhcCcCcccCCCcc
Confidence 55667899876554 4699999999999999999999999999999999999999996653
No 34
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=99.04 E-value=9.8e-11 Score=106.26 Aligned_cols=56 Identities=32% Similarity=0.847 Sum_probs=49.5
Q ss_pred CCceeEEEeeCCcccCccCcccccccccCeeeeCCCCCcccccccccccCCCccchh
Q psy13753 3 TSHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSR 59 (229)
Q Consensus 3 ~~H~f~~~~~~~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~v~~~C~~~~~ 59 (229)
.+|.|..+++..||+|++|+.++||+.+||++|..|++++|++|..+++. |+....
T Consensus 345 ~~h~f~~~~~~~~t~C~~C~~~~~g~~~qg~~C~~C~~~~h~~C~~~~~~-C~~~~~ 400 (406)
T 2vrw_B 345 NGHDFQMFSFEETTSCKACQMLLRGTFYQGYRCYRCRAPAHKECLGRVPP-CGRHGQ 400 (406)
T ss_dssp GGCCEEEECCSSCCBCTTTCCBCCSSSSCEEEETTTCCEECGGGGGGSCC-C-----
T ss_pred CCCCCccccCCCCCCCccccchhceeCCCCCCCCCCcCccchhhhhhCCC-CCCCch
Confidence 57999999999999999999999999999999999999999999999995 987654
No 35
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=98.85 E-value=1.5e-09 Score=98.51 Aligned_cols=58 Identities=21% Similarity=0.439 Sum_probs=46.8
Q ss_pred ccccceeeecccCCCcccccCCCCCCCCccCceEeeecccccchhccccCCCCCCcChhh
Q psy13753 121 LSSHELKTYSRQNSPRLVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKSRL 180 (229)
Q Consensus 121 ~~~h~~~~~~~~~~pt~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~C~~~~~~ 180 (229)
..+|.|...++ ..||+|.+|+.++||+.+||++|..|++++|++|...|+. |+.....
T Consensus 344 ~~~h~f~~~~~-~~~t~C~~C~~~~~g~~~qg~~C~~C~~~~h~~C~~~~~~-C~~~~~~ 401 (406)
T 2vrw_B 344 ANGHDFQMFSF-EETTSCKACQMLLRGTFYQGYRCYRCRAPAHKECLGRVPP-CGRHGQD 401 (406)
T ss_dssp GGGCCEEEECC-SSCCBCTTTCCBCCSSSSCEEEETTTCCEECGGGGGGSCC-C------
T ss_pred CCCCCCccccC-CCCCCCccccchhceeCCCCCCCCCCcCccchhhhhhCCC-CCCCchh
Confidence 45788876655 4699999999999999999999999999999999999995 9886543
No 36
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=98.80 E-value=2.2e-09 Score=101.99 Aligned_cols=56 Identities=20% Similarity=0.446 Sum_probs=46.9
Q ss_pred ccccceeeecccCCCcccccCCCCCCCCccCceEeeecccccchhccccCCCCCCcCh
Q psy13753 121 LSSHELKTYSRQNSPRLVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQEKVPAKCQPKS 178 (229)
Q Consensus 121 ~~~h~~~~~~~~~~pt~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~C~~~~ 178 (229)
.++|.|...++ ..||+|++|+++|||+.+||++|..|+++||++|...| ..|+...
T Consensus 516 ~~~H~F~~~~~-~~~t~C~~C~~~l~gl~~qg~~C~~C~~~vHk~C~~~v-~~C~~~~ 571 (587)
T 3ky9_A 516 ANGHDFQMFSF-EETTSCKACQMLLRGTFYQGYRCHRCRASAHKECLGRV-PPCGRHG 571 (587)
T ss_dssp GGGCCEEEECC-SSCCBCTTTCSBCCSSSCCEEEETTTCCEECSGGGGGS-CCC----
T ss_pred ccCCceeEEeC-CCCcccccccccccccccCCcCCCCCCCccchhhhhcC-CCCCCCC
Confidence 35788886665 47999999999999999999999999999999999999 4898764
No 37
>1r79_A Diacylglycerol kinase, delta; C1 domain, cystein-rich zinc binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: g.49.1.1
Probab=98.37 E-value=4.2e-07 Score=65.12 Aligned_cols=43 Identities=26% Similarity=0.469 Sum_probs=37.0
Q ss_pred CcccccCCCCCCC-CccCceEeeecccccchhccccCCCCCCcC
Q psy13753 135 PRLVVTSPGGPGG-HTRQGLKCRLCKTNVHVDCQEKVPAKCQPK 177 (229)
Q Consensus 135 pt~C~~C~~~i~g-~~~qg~~C~~C~~~~H~~C~~~v~~~C~~~ 177 (229)
..+|..|...+++ +..+|++|.||++.+|.+|.+.++..|..+
T Consensus 38 ~s~C~vC~k~c~s~~~L~g~rC~WCq~~VH~~C~~~~~~eC~lG 81 (84)
T 1r79_A 38 SAKCTVCDKTCGSVLRLQDWRCLWCKAMVHTSCKESLLTKCSGP 81 (84)
T ss_dssp TCBCSSSCCBCCCTTTCCCEEESSSCCEECHHHHHHCCSCBCCS
T ss_pred CCEeCCCCCEeCCccCCCCCCCcccChhHHHHHHHhccCcCCCC
Confidence 3579999888775 356999999999999999999999999765
No 38
>1r79_A Diacylglycerol kinase, delta; C1 domain, cystein-rich zinc binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: g.49.1.1
Probab=97.80 E-value=1.1e-05 Score=57.78 Aligned_cols=55 Identities=27% Similarity=0.571 Sum_probs=48.0
Q ss_pred CCceeEEEeeCCcccCccCcccccc-cccCeeeeCCCCCcccccccccccCCCccc
Q psy13753 3 TSHQFQEYTYKKITPCDICSQVLRG-HTRQGLKCRLCKTNVHVDCQEKVPAKCQPK 57 (229)
Q Consensus 3 ~~H~f~~~~~~~pt~C~~C~~~l~G-l~~qgl~C~~C~~~~Hk~C~~~v~~~C~~~ 57 (229)
..|.|..-.+..+++|++|.+.+++ +.-+|++|.-|++.+|.+|...++..|.-.
T Consensus 26 ~~H~WveGNl~~~s~C~vC~k~c~s~~~L~g~rC~WCq~~VH~~C~~~~~~eC~lG 81 (84)
T 1r79_A 26 MPHQWLEGNLPVSAKCTVCDKTCGSVLRLQDWRCLWCKAMVHTSCKESLLTKCSGP 81 (84)
T ss_dssp BCCCEEESCCCTTCBCSSSCCBCCCTTTCCCEEESSSCCEECHHHHHHCCSCBCCS
T ss_pred ceeeEEccCCCCCCEeCCCCCEeCCccCCCCCCCcccChhHHHHHHHhccCcCCCC
Confidence 4699999988888999999999875 344999999999999999999999888643
No 39
>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3
Probab=93.78 E-value=0.048 Score=38.91 Aligned_cols=44 Identities=18% Similarity=0.441 Sum_probs=34.0
Q ss_pred CceeEEEeeCCcccCccCcccccccccCeeeeCCCCCccccccccccc
Q psy13753 4 SHQFQEYTYKKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVP 51 (229)
Q Consensus 4 ~H~f~~~~~~~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~v~ 51 (229)
.|.+.... ..+.+|+.|++..-| -.|.|..|+|..|..|+..-+
T Consensus 37 ~H~L~L~~-~~~~~C~~C~~~~~~---~~Y~C~~C~f~lH~~Ca~~p~ 80 (89)
T 1v5n_A 37 EHELELTR-VQVYTCDKCEEEGTI---WSYHCDECDFDLHAKCALNED 80 (89)
T ss_dssp TSCEEEEC-CSSCCCTTTSCCCCS---CEEECTTTCCCCCHHHHHCSS
T ss_pred CCccEEee-CCCeEeCCCCCcCCC---cEEEcCCCCCeEcHHhcCCCC
Confidence 46666643 347899999997644 469999999999999987544
No 40
>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3
Probab=86.74 E-value=0.3 Score=34.68 Aligned_cols=34 Identities=12% Similarity=0.168 Sum_probs=27.8
Q ss_pred CcccccCCCCCCCCccCceEeeecccccchhccccCC
Q psy13753 135 PRLVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQEKVP 171 (229)
Q Consensus 135 pt~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~ 171 (229)
+-+|+.|+..+.| -.|+|..|++..|.+|...-+
T Consensus 47 ~~~C~~C~~~~~~---~~Y~C~~C~f~lH~~Ca~~p~ 80 (89)
T 1v5n_A 47 VYTCDKCEEEGTI---WSYHCDECDFDLHAKCALNED 80 (89)
T ss_dssp SCCCTTTSCCCCS---CEEECTTTCCCCCHHHHHCSS
T ss_pred CeEeCCCCCcCCC---cEEEcCCCCCeEcHHhcCCCC
Confidence 4579999987554 459999999999999987544
No 41
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=73.18 E-value=0.96 Score=30.94 Aligned_cols=34 Identities=32% Similarity=0.810 Sum_probs=29.0
Q ss_pred CCcccCccCcccccccccCeeeeCCCCCcccccccccc
Q psy13753 13 KKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKV 50 (229)
Q Consensus 13 ~~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~v 50 (229)
.....|..|.+.+- +|.+|..|+-.+|..|..+-
T Consensus 13 ~~i~~C~IC~~~i~----~g~~C~~C~h~fH~~Ci~kW 46 (74)
T 2ct0_A 13 DAVKICNICHSLLI----QGQSCETCGIRMHLPCVAKY 46 (74)
T ss_dssp SSSCBCSSSCCBCS----SSEECSSSCCEECHHHHHHH
T ss_pred CCCCcCcchhhHcc----cCCccCCCCchhhHHHHHHH
Confidence 45678999999774 78999999999999998754
No 42
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=68.85 E-value=1.7 Score=36.21 Aligned_cols=33 Identities=33% Similarity=0.829 Sum_probs=28.4
Q ss_pred CcccCccCcccccccccCeeeeCCCCCcccccccccc
Q psy13753 14 KITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKV 50 (229)
Q Consensus 14 ~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~v 50 (229)
....|..|.+++- +|.+|..|+...|..|..+.
T Consensus 179 ~i~~C~iC~~iv~----~g~~C~~C~~~~H~~C~~~~ 211 (238)
T 3nw0_A 179 AVKICNICHSLLI----QGQSCETCGIRMHLPCVAKY 211 (238)
T ss_dssp TCCBCTTTCSBCS----SCEECSSSCCEECHHHHHHH
T ss_pred CCCcCcchhhHHh----CCcccCccChHHHHHHHHHH
Confidence 3678999999774 78999999999999998664
No 43
>3ddc_B RAS association domain-containing family protein; oncogene, tumorsuppressor, ubiquitin fold, RAS effector, RAP rassf1, rassf5, RAPL, NORE1, GMPPNP; HET: GNP; 1.80A {Mus musculus}
Probab=61.67 E-value=3.2 Score=32.66 Aligned_cols=15 Identities=40% Similarity=0.328 Sum_probs=12.8
Q ss_pred CceeeeEEEeeecce
Q psy13753 205 PLFITGIIKVRLPYV 219 (229)
Q Consensus 205 ~~~~~g~~~v~~~~~ 219 (229)
.+.|+|||+|+|.+.
T Consensus 34 dgsytGFIkV~l~L~ 48 (163)
T 3ddc_B 34 DGTYTGFIKVHLKLR 48 (163)
T ss_dssp GGCEEEEEEEEEEEE
T ss_pred CCcccceEEEEEEec
Confidence 458999999999875
No 44
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=58.56 E-value=3.6 Score=34.28 Aligned_cols=31 Identities=23% Similarity=0.426 Sum_probs=26.2
Q ss_pred CcccccCCCCCCCCccCceEeeecccccchhcccc
Q psy13753 135 PRLVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQEK 169 (229)
Q Consensus 135 pt~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~ 169 (229)
-..|..|.+++- +|.+|..|+...|..|...
T Consensus 180 i~~C~iC~~iv~----~g~~C~~C~~~~H~~C~~~ 210 (238)
T 3nw0_A 180 VKICNICHSLLI----QGQSCETCGIRMHLPCVAK 210 (238)
T ss_dssp CCBCTTTCSBCS----SCEECSSSCCEECHHHHHH
T ss_pred CCcCcchhhHHh----CCcccCccChHHHHHHHHH
Confidence 457999987654 8999999999999999755
No 45
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=53.91 E-value=3.8 Score=27.86 Aligned_cols=29 Identities=21% Similarity=0.439 Sum_probs=24.8
Q ss_pred cccccCCCCCCCCccCceEeeecccccchhccc
Q psy13753 136 RLVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQE 168 (229)
Q Consensus 136 t~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~ 168 (229)
..|..|.+.+. +|.+|..|+...|..|..
T Consensus 16 ~~C~IC~~~i~----~g~~C~~C~h~fH~~Ci~ 44 (74)
T 2ct0_A 16 KICNICHSLLI----QGQSCETCGIRMHLPCVA 44 (74)
T ss_dssp CBCSSSCCBCS----SSEECSSSCCEECHHHHH
T ss_pred CcCcchhhHcc----cCCccCCCCchhhHHHHH
Confidence 46889987653 799999999999999976
No 46
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=47.15 E-value=14 Score=25.65 Aligned_cols=35 Identities=26% Similarity=0.577 Sum_probs=25.6
Q ss_pred cccCccCcccccccccCeeeeCCCCCccccccccc
Q psy13753 15 ITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEK 49 (229)
Q Consensus 15 pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~ 49 (229)
-.+|.+|+..--.-..+-+.|..|...+|-.|..-
T Consensus 16 ~~~C~vC~~~~~~~~~~ll~CD~C~~~yH~~Cl~P 50 (88)
T 1wev_A 16 GLACVVCRQMTVASGNQLVECQECHNLYHQDCHKP 50 (88)
T ss_dssp CCSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSS
T ss_pred CCcCCCCCCCCCCCCCceEECCCCCCeEcCccCCC
Confidence 45899998732111246789999999999999763
No 47
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=45.64 E-value=15 Score=23.75 Aligned_cols=35 Identities=20% Similarity=0.478 Sum_probs=25.5
Q ss_pred cccCccCcccccccccCeeeeCCCCCccccccccc
Q psy13753 15 ITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEK 49 (229)
Q Consensus 15 pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~ 49 (229)
-.+|.+|+..--.-..+-+.|..|...+|..|..-
T Consensus 6 ~~~C~vC~~~~~~~~~~ll~Cd~C~~~~H~~C~~p 40 (66)
T 2yt5_A 6 SGVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTP 40 (66)
T ss_dssp CCCBSSSCCCCCBTTBCEEECSSSCCEEETTTSSS
T ss_pred CCCCCCCCCCCCCCCCCEEECCCCChHHHhhhCCC
Confidence 35789998632111246789999999999999774
No 48
>2csz_A Synaptotagmin-like protein 4; exophilin 2, granuphilin, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=44.85 E-value=10 Score=26.01 Aligned_cols=36 Identities=25% Similarity=0.473 Sum_probs=28.2
Q ss_pred cccCccCcccccccccCeeeeCCCCCcccccccccc
Q psy13753 15 ITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKV 50 (229)
Q Consensus 15 pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~v 50 (229)
--.|..|++.|--++..|-.|.+|+..+=++|....
T Consensus 25 ~r~CarC~~~LG~l~~~g~~C~~Ck~rVC~~Crv~~ 60 (76)
T 2csz_A 25 DRTCARCQESLGRLSPKTNTCRGCNHLVCRDCRIQE 60 (76)
T ss_dssp CCBCSSSCCBCSSSCTTTSEETTTTEECCTTSEEEC
T ss_pred ccchhhhCccccccccCCCcCcccChhhcccccccC
Confidence 357999999885567889999999987776766544
No 49
>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=43.78 E-value=15 Score=25.72 Aligned_cols=26 Identities=27% Similarity=0.763 Sum_probs=20.0
Q ss_pred CcccCccCcccccccccCeeeeCCCCCcc
Q psy13753 14 KITPCDICSQVLRGHTRQGLKCRLCKTNV 42 (229)
Q Consensus 14 ~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~ 42 (229)
.+..|..|+..+ ||. ++++|. |+.++
T Consensus 24 ~~~rC~~C~kkv-gl~-~~f~Cr-Cg~~F 49 (85)
T 1wff_A 24 IMKHCFLCGKKT-GLA-TSFECR-CGNNF 49 (85)
T ss_dssp CCCBCSSSCCBC-SSS-SCEECT-TCCEE
T ss_pred cCccchhhCCee-ccc-CCeEcC-CCCEe
Confidence 357899999975 554 689997 98765
No 50
>2csz_A Synaptotagmin-like protein 4; exophilin 2, granuphilin, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=40.14 E-value=13 Score=25.43 Aligned_cols=36 Identities=22% Similarity=0.345 Sum_probs=30.6
Q ss_pred CcccccCCCCCCCCccCceEeeecccccchhccccC
Q psy13753 135 PRLVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQEKV 170 (229)
Q Consensus 135 pt~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v 170 (229)
...|..|+.-+.-+...|..|.+|+..|=.+|....
T Consensus 25 ~r~CarC~~~LG~l~~~g~~C~~Ck~rVC~~Crv~~ 60 (76)
T 2csz_A 25 DRTCARCQESLGRLSPKTNTCRGCNHLVCRDCRIQE 60 (76)
T ss_dssp CCBCSSSCCBCSSSCTTTSEETTTTEECCTTSEEEC
T ss_pred ccchhhhCccccccccCCCcCcccChhhcccccccC
Confidence 457999999887778899999999999988887654
No 51
>3qt1_I DNA-directed RNA polymerases I, II, and III subun; transferase-transcription complex, RNA polymerase II, transc elongation; 4.30A {Saccharomyces cerevisiae}
Probab=37.47 E-value=15 Score=27.75 Aligned_cols=30 Identities=23% Similarity=0.476 Sum_probs=21.7
Q ss_pred CCcccCccCcccccccc-----cCeeeeCCCCCcc
Q psy13753 13 KKITPCDICSQVLRGHT-----RQGLKCRLCKTNV 42 (229)
Q Consensus 13 ~~pt~C~~C~~~l~Gl~-----~qgl~C~~C~~~~ 42 (229)
....||.-|+++|.--. .--|.|..|+|..
T Consensus 22 ~~~~FCPeCgNmL~pked~~~~~l~~~CrtCgY~~ 56 (133)
T 3qt1_I 22 TTFRFCRDCNNMLYPREDKENNRLLFECRTCSYVE 56 (133)
T ss_dssp CCCCBCTTTCCBCBCCBCTTTCCBCCBCSSSCCBC
T ss_pred cCCeeCCCCCCEeeECccCCCceeEEECCCCCCcE
Confidence 35689999999995221 1138999999865
No 52
>3h0g_I DNA-directed RNA polymerases I, II, and III subunit rpabc5; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=35.35 E-value=19 Score=26.25 Aligned_cols=29 Identities=24% Similarity=0.455 Sum_probs=20.9
Q ss_pred cccCccCccccccccc-----CeeeeCCCCCccc
Q psy13753 15 ITPCDICSQVLRGHTR-----QGLKCRLCKTNVH 43 (229)
Q Consensus 15 pt~C~~C~~~l~Gl~~-----qgl~C~~C~~~~H 43 (229)
-.||..|+++|.--.. .-|.|..|++...
T Consensus 4 m~FCp~Cgn~L~~~~~~~~~~~~~~C~~C~y~~~ 37 (113)
T 3h0g_I 4 FQYCIECNNMLYPREDKVDRVLRLACRNCDYSEI 37 (113)
T ss_dssp CCCCSSSCCCCEECCCTTTCCCCEECSSSCCEEC
T ss_pred ceeCcCCCCEeeEcccCCCCeeEEECCCCCCeEE
Confidence 4699999999952211 2489999998653
No 53
>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=34.63 E-value=63 Score=21.87 Aligned_cols=25 Identities=36% Similarity=0.848 Sum_probs=18.8
Q ss_pred CcccCccCcccccccccCeeeeCCCCCcc
Q psy13753 14 KITPCDICSQVLRGHTRQGLKCRLCKTNV 42 (229)
Q Consensus 14 ~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~ 42 (229)
.+..|..|+..+ ||. +++|. |+.++
T Consensus 24 ~~nRC~~CrKkv-gL~--gf~Cr-Cg~~F 48 (74)
T 1wfl_A 24 KKNRCFMCRKKV-GLT--GFDCR-CGNLF 48 (74)
T ss_dssp CTTBCSSSCCBC-GGG--CEECT-TSCEE
T ss_pred cCCcChhhCCcc-ccc--CeecC-CCCEe
Confidence 456899999865 553 79999 98664
No 54
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=33.95 E-value=18 Score=24.20 Aligned_cols=37 Identities=24% Similarity=0.512 Sum_probs=27.2
Q ss_pred CCcccCccCcccccccccCeeeeCCCCCccccccccc
Q psy13753 13 KKITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEK 49 (229)
Q Consensus 13 ~~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~ 49 (229)
..-.+|.+|+..=..-..+-+.|..|...+|..|...
T Consensus 14 ~~~~~C~vC~~~~s~~~~~ll~CD~C~~~~H~~Cl~~ 50 (71)
T 2ku3_A 14 DEDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGV 50 (71)
T ss_dssp CSSCSCSSSCCCCCCSSSCEEECSSSCCEEEHHHHTC
T ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCCCccccccCCC
Confidence 3467899998732112346689999999999999764
No 55
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=33.70 E-value=26 Score=22.46 Aligned_cols=30 Identities=23% Similarity=0.708 Sum_probs=23.7
Q ss_pred cccCccCcccccccccCeeeeCCCCCccccccccc
Q psy13753 15 ITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEK 49 (229)
Q Consensus 15 pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~ 49 (229)
-.+|.+|+. . .+-+.|..|...+|-.|..-
T Consensus 9 ~~~C~vC~~--~---g~ll~Cd~C~~~fH~~Cl~p 38 (61)
T 1mm2_A 9 MEFCRVCKD--G---GELLCCDTCPSSYHIHCLNP 38 (61)
T ss_dssp CSSCTTTCC--C---SSCBCCSSSCCCBCSSSSSS
T ss_pred CCcCCCCCC--C---CCEEEcCCCCHHHcccccCC
Confidence 457999986 2 25688999999999998773
No 56
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.91 E-value=32 Score=21.44 Aligned_cols=31 Identities=29% Similarity=0.682 Sum_probs=24.6
Q ss_pred CcccCccCcccccccccCeeeeCCCCCccccccccc
Q psy13753 14 KITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEK 49 (229)
Q Consensus 14 ~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~ 49 (229)
.-.+|.+|+.. ..-+.|..|...+|..|..-
T Consensus 8 ~~~~C~vC~~~-----g~ll~Cd~C~~~~H~~Cl~p 38 (56)
T 2yql_A 8 HEDFCSVCRKS-----GQLLMCDTCSRVYHLDCLDP 38 (56)
T ss_dssp SCCSCSSSCCS-----SCCEECSSSSCEECSSSSSS
T ss_pred CCCCCccCCCC-----CeEEEcCCCCcceECccCCC
Confidence 34689999873 25688999999999998873
No 57
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=31.79 E-value=32 Score=21.76 Aligned_cols=30 Identities=33% Similarity=0.782 Sum_probs=24.2
Q ss_pred cccCccCcccccccccCeeeeCCCCCccccccccc
Q psy13753 15 ITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEK 49 (229)
Q Consensus 15 pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~ 49 (229)
-.+|.+|+.. | .-+.|..|...+|-.|..-
T Consensus 5 ~~~C~vC~~~--g---~ll~Cd~C~~~fH~~Cl~p 34 (60)
T 2puy_A 5 EDFCSVCRKS--G---QLLMCDTCSRVYHLDCLDP 34 (60)
T ss_dssp CSSCTTTCCC--S---SCEECSSSSCEECGGGSSS
T ss_pred CCCCcCCCCC--C---cEEEcCCCCcCEECCcCCC
Confidence 3579999872 3 6689999999999999873
No 58
>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=31.77 E-value=29 Score=22.93 Aligned_cols=25 Identities=28% Similarity=0.708 Sum_probs=19.1
Q ss_pred CcccCccCcccccccccCeeeeCCCCCcc
Q psy13753 14 KITPCDICSQVLRGHTRQGLKCRLCKTNV 42 (229)
Q Consensus 14 ~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~ 42 (229)
.+..|..|+..+ ||. +++| .|+.++
T Consensus 14 ~~~rC~~C~kkv-gl~--~f~C-rCg~~F 38 (64)
T 1wg2_A 14 PNNRCFSCNKKV-GVM--GFKC-KCGSTF 38 (64)
T ss_dssp CSCSCTTTCCCC-TTS--CEEC-TTSCEE
T ss_pred cCCcChhhCCcc-ccc--CeEe-ecCCEe
Confidence 467899999865 554 8999 688765
No 59
>2e5r_A Dystrobrevin alpha; ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.48 E-value=32 Score=22.34 Aligned_cols=23 Identities=22% Similarity=0.706 Sum_probs=17.4
Q ss_pred CcccCccCccc-ccccccCeeeeCCCC
Q psy13753 14 KITPCDICSQV-LRGHTRQGLKCRLCK 39 (229)
Q Consensus 14 ~pt~C~~C~~~-l~Gl~~qgl~C~~C~ 39 (229)
-+..|+.|+.. |.| .-|+|..|.
T Consensus 10 H~~~Cd~C~~~pi~G---~RykC~~C~ 33 (63)
T 2e5r_A 10 HPVECSYCHSESMMG---FRYRCQQCH 33 (63)
T ss_dssp SCSCCSSSCCCSSCS---CEEEESSCS
T ss_pred eCCCCcCCCCcceec---ceEEecCCC
Confidence 34789999975 777 458898773
No 60
>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=31.47 E-value=29 Score=22.87 Aligned_cols=26 Identities=35% Similarity=0.929 Sum_probs=19.6
Q ss_pred CCcccCccCcccccccccCeeeeCCCCCcc
Q psy13753 13 KKITPCDICSQVLRGHTRQGLKCRLCKTNV 42 (229)
Q Consensus 13 ~~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~ 42 (229)
..+..|..|+..+ ||. +++|. |+.++
T Consensus 13 ~~~~rC~~C~kkv-gl~--~f~Cr-Cg~~F 38 (64)
T 1wfh_A 13 QRPNRCTVCRKRV-GLT--GFMCR-CGTTF 38 (64)
T ss_dssp SSCCCCTTTCCCC-CTT--CEECS-SSCEE
T ss_pred CcCCcChhhCCcc-Ccc--CEEee-cCCEe
Confidence 4578899999865 554 89994 88664
No 61
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=30.53 E-value=23 Score=21.51 Aligned_cols=30 Identities=23% Similarity=0.711 Sum_probs=22.7
Q ss_pred cCccCcccccccccCeeeeCCCCCcccccccc
Q psy13753 17 PCDICSQVLRGHTRQGLKCRLCKTNVHVDCQE 48 (229)
Q Consensus 17 ~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~ 48 (229)
+|.+|+.. |-..+-+.|..|...+|-.|..
T Consensus 2 ~C~vC~~~--~~~~~ll~Cd~C~~~~H~~Cl~ 31 (51)
T 1f62_A 2 RCKVCRKK--GEDDKLILCDECNKAFHLFCLR 31 (51)
T ss_dssp CCTTTCCS--SCCSCCEECTTTCCEECHHHHC
T ss_pred CCCCCCCC--CCCCCEEECCCCChhhCcccCC
Confidence 68888763 2233568899999999999976
No 62
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=30.11 E-value=12 Score=26.19 Aligned_cols=34 Identities=24% Similarity=0.610 Sum_probs=25.2
Q ss_pred cccCccCcccccccccCeeeeCCCCCccccccccccc
Q psy13753 15 ITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVP 51 (229)
Q Consensus 15 pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~v~ 51 (229)
--.|++|.. |. ...-+.|+.|+.++|..|..+..
T Consensus 15 D~~C~VC~~--~t-~~~l~pCRvC~RvfH~~CL~r~g 48 (89)
T 1wil_A 15 DEMCDVCEV--WT-AESLFPCRVCTRVFHDGCLRRMG 48 (89)
T ss_dssp SCCCTTTCC--CC-SSCCSSCSSSSSCCCHHHHHHHT
T ss_pred CcccCcccc--cc-ccceeccccccccccHhhccccc
Confidence 357888865 32 23447899999999999988753
No 63
>1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1
Probab=29.19 E-value=36 Score=25.61 Aligned_cols=38 Identities=24% Similarity=0.528 Sum_probs=30.0
Q ss_pred CcccCccCcccccccccCeeeeCCCCCccccccccccc
Q psy13753 14 KITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVP 51 (229)
Q Consensus 14 ~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~v~ 51 (229)
....|..|..-+--+...|-.|.+|+..+=++|...++
T Consensus 54 ~~~~C~~C~~~~g~l~~~g~~C~~C~~~VC~~C~~~~~ 91 (134)
T 1zbd_B 54 GVNRCILCGEQLGMLGSASVVCEDCKKNVCTKCGVETS 91 (134)
T ss_dssp SSSBCSSSCCBCSTTSCCEEECTTTCCEEETTSEEECC
T ss_pred CCccccccCCCcccccCCCCCCCCCCcccccccCCccC
Confidence 35689999997722456789999999998888887764
No 64
>2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus}
Probab=28.86 E-value=43 Score=25.80 Aligned_cols=38 Identities=26% Similarity=0.408 Sum_probs=30.0
Q ss_pred CcccCccCcccccccccCeeeeCCCCCccccccccccc
Q psy13753 14 KITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEKVP 51 (229)
Q Consensus 14 ~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~v~ 51 (229)
....|..|..-+--+...|-.|.+|+..+=++|....+
T Consensus 67 ~~~~C~~C~~~fg~l~~~g~~C~~C~~~VC~~C~~~~~ 104 (153)
T 2zet_C 67 NETHCARCLQPYRLLLNSRRQCLECSLFVCKSCSHAHP 104 (153)
T ss_dssp GGTBCTTTCCBGGGCSSCCEECTTTCCEECGGGEECCS
T ss_pred CCccchhhcCccccccCCCCcCCCCCchhhcccccccC
Confidence 35789999997633566799999999998888886554
No 65
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=28.12 E-value=35 Score=22.07 Aligned_cols=30 Identities=20% Similarity=0.578 Sum_probs=24.3
Q ss_pred CcccCccCcccccccccCeeeeCCCCCcccccccc
Q psy13753 14 KITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQE 48 (229)
Q Consensus 14 ~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~ 48 (229)
.-.+|.+|+.. ..-+.|..|...+|..|..
T Consensus 7 ~~~~C~vC~~~-----g~ll~CD~C~~~fH~~Cl~ 36 (66)
T 1xwh_A 7 NEDECAVCRDG-----GELICCDGCPRAFHLACLS 36 (66)
T ss_dssp CCCSBSSSSCC-----SSCEECSSCCCEECTTTSS
T ss_pred CCCCCccCCCC-----CCEEEcCCCChhhcccccC
Confidence 34689999862 2568999999999999987
No 66
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=28.09 E-value=39 Score=20.45 Aligned_cols=28 Identities=18% Similarity=0.530 Sum_probs=19.5
Q ss_pred ccCccCcc--cccccccCeeeeCCCCCccc
Q psy13753 16 TPCDICSQ--VLRGHTRQGLKCRLCKTNVH 43 (229)
Q Consensus 16 t~C~~C~~--~l~Gl~~qgl~C~~C~~~~H 43 (229)
..|..|+. +++--..+-+.|..|+..+-
T Consensus 6 ~~CP~C~~~~l~~d~~~gelvC~~CG~v~~ 35 (50)
T 1pft_A 6 KVCPACESAELIYDPERGEIVCAKCGYVIE 35 (50)
T ss_dssp CSCTTTSCCCEEEETTTTEEEESSSCCBCC
T ss_pred EeCcCCCCcceEEcCCCCeEECcccCCccc
Confidence 46888976 44544556789999987653
No 67
>3j20_Y 30S ribosomal protein S27AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=28.01 E-value=32 Score=21.36 Aligned_cols=29 Identities=17% Similarity=0.366 Sum_probs=21.1
Q ss_pred CcccCccCcc--cccccccCeeeeCCCCCccc
Q psy13753 14 KITPCDICSQ--VLRGHTRQGLKCRLCKTNVH 43 (229)
Q Consensus 14 ~pt~C~~C~~--~l~Gl~~qgl~C~~C~~~~H 43 (229)
...+|..|+. ++. ....-+.|..|+++.-
T Consensus 18 ~~k~CP~CG~~~fm~-~~~~R~~C~kCG~t~~ 48 (50)
T 3j20_Y 18 KNKFCPRCGPGVFMA-DHGDRWACGKCGYTEW 48 (50)
T ss_dssp SSEECSSSCSSCEEE-ECSSEEECSSSCCEEE
T ss_pred ecccCCCCCCceEEe-cCCCeEECCCCCCEEE
Confidence 4678999998 443 3346689999998753
No 68
>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=27.99 E-value=36 Score=23.12 Aligned_cols=25 Identities=36% Similarity=0.817 Sum_probs=18.8
Q ss_pred CcccCccCcccccccccCeeeeCCCCCcc
Q psy13753 14 KITPCDICSQVLRGHTRQGLKCRLCKTNV 42 (229)
Q Consensus 14 ~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~ 42 (229)
.+..|..|+..+ ||. +++| .|+.++
T Consensus 24 ~~~RC~~C~kkv-gL~--~f~C-rCg~~F 48 (74)
T 1wfp_A 24 TATRCLSCNKKV-GVT--GFKC-RCGSTF 48 (74)
T ss_dssp CCCBCSSSCCBC-TTT--CEEC-TTSCEE
T ss_pred cCccchhhcCcc-ccc--ceEe-ccCCEe
Confidence 467899998865 554 8999 588664
No 69
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=27.79 E-value=25 Score=24.42 Aligned_cols=36 Identities=25% Similarity=0.521 Sum_probs=26.1
Q ss_pred CcccCccCcccccccccCeeeeCCCCCccccccccc
Q psy13753 14 KITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEK 49 (229)
Q Consensus 14 ~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~ 49 (229)
.-.+|.+|+..-..-..+-+.|..|...+|..|...
T Consensus 24 ~~~~C~vC~~~~s~~~~~ll~CD~C~~~fH~~Cl~p 59 (88)
T 2l43_A 24 EDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGV 59 (88)
T ss_dssp CCCCCSSCCSSSSCSEEEEEECSSSCCCCCHHHHTC
T ss_pred CCCcCCcCCCCCCCCCCCEEECCCCCchhhcccCCC
Confidence 347899998632112235688999999999999864
No 70
>1x4w_A Hypothetical protein FLJ13222; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=27.58 E-value=14 Score=24.69 Aligned_cols=28 Identities=25% Similarity=0.328 Sum_probs=20.1
Q ss_pred CCcccCccCcccccccccC-eeeeCCCCCcc
Q psy13753 13 KKITPCDICSQVLRGHTRQ-GLKCRLCKTNV 42 (229)
Q Consensus 13 ~~pt~C~~C~~~l~Gl~~q-gl~C~~C~~~~ 42 (229)
..+..|..|+..+ ||..+ |++| .|+.++
T Consensus 13 ~~~~rC~~C~kk~-gL~~~egf~C-rCg~~F 41 (67)
T 1x4w_A 13 KSRRRCFQCQTKL-ELVQQELGSC-RCGYVF 41 (67)
T ss_dssp SCTTBCSSSCCBC-CHHHHHHHCC-SSSCCC
T ss_pred ccCCcchhhCCee-cccccCceEe-cCCCEe
Confidence 3467899999866 56433 6899 688664
No 71
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=27.37 E-value=25 Score=23.07 Aligned_cols=29 Identities=28% Similarity=0.761 Sum_probs=23.5
Q ss_pred cccCccCcccccccccCeeeeCCCCCcccccccc
Q psy13753 15 ITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQE 48 (229)
Q Consensus 15 pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~ 48 (229)
-..|.+|++ | ..-+.|..|...+|..|..
T Consensus 12 ~~~C~vC~~---~--~~ll~Cd~C~~~~H~~Cl~ 40 (66)
T 2lri_C 12 GARCGVCGD---G--TDVLRCTHCAAAFHWRCHF 40 (66)
T ss_dssp TCCCTTTSC---C--TTCEECSSSCCEECHHHHC
T ss_pred CCCcCCCCC---C--CeEEECCCCCCceecccCC
Confidence 357999976 2 3578999999999999975
No 72
>1dl6_A Transcription factor II B (TFIIB); zinc ribbon, gene regulation; NMR {Homo sapiens} SCOP: g.41.3.1 PDB: 1rly_A 1ro4_A
Probab=27.10 E-value=56 Score=20.72 Aligned_cols=34 Identities=12% Similarity=0.151 Sum_probs=23.2
Q ss_pred eCCcccCccCcc--cccccccCeeeeCCCCCccccc
Q psy13753 12 YKKITPCDICSQ--VLRGHTRQGLKCRLCKTNVHVD 45 (229)
Q Consensus 12 ~~~pt~C~~C~~--~l~Gl~~qgl~C~~C~~~~Hk~ 45 (229)
+.....|..|+. +++.-...-+.|..|++++-.+
T Consensus 8 ll~~~~Cp~C~~~~lv~D~~~ge~vC~~CGlVl~e~ 43 (58)
T 1dl6_A 8 ALPRVTCPNHPDAILVEDYRAGDMICPECGLVVGDR 43 (58)
T ss_dssp CCSCCSBTTBSSSCCEECSSSCCEECTTTCCEECCS
T ss_pred ccccccCcCCCCCceeEeCCCCeEEeCCCCCEEecc
Confidence 445567999975 5554444558899999877544
No 73
>2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus}
Probab=26.32 E-value=32 Score=26.56 Aligned_cols=37 Identities=14% Similarity=0.106 Sum_probs=30.0
Q ss_pred CcccccCCCCCCCCccCceEeeecccccchhccccCC
Q psy13753 135 PRLVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQEKVP 171 (229)
Q Consensus 135 pt~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~ 171 (229)
.+.|..|..-+.-+...|..|.+|+..+=++|...++
T Consensus 68 ~~~C~~C~~~fg~l~~~g~~C~~C~~~VC~~C~~~~~ 104 (153)
T 2zet_C 68 ETHCARCLQPYRLLLNSRRQCLECSLFVCKSCSHAHP 104 (153)
T ss_dssp GTBCTTTCCBGGGCSSCCEECTTTCCEECGGGEECCS
T ss_pred CccchhhcCccccccCCCCcCCCCCchhhcccccccC
Confidence 4679999886655567899999999999999986554
No 74
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=26.25 E-value=28 Score=22.86 Aligned_cols=26 Identities=19% Similarity=0.401 Sum_probs=17.4
Q ss_pred ccccCCCCCCCCccCceEeeeccccc
Q psy13753 137 LVVTSPGGPGGHTRQGLKCRLCKTNV 162 (229)
Q Consensus 137 ~C~~C~~~i~g~~~qg~~C~~C~~~~ 162 (229)
.|..|+.-..--.....+|..|++-+
T Consensus 23 ~C~~Cg~~~~l~~~~~iRC~~CG~RI 48 (63)
T 3h0g_L 23 LCADCGARNTIQAKEVIRCRECGHRV 48 (63)
T ss_dssp BCSSSCCBCCCCSSSCCCCSSSCCCC
T ss_pred ECCCCCCeeecCCCCceECCCCCcEE
Confidence 37777765443345678998888754
No 75
>1twf_I B12.6, DNA-directed RNA polymerase II 14.2 kDa polypepti; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.3.1 g.41.3.1 PDB: 1i3q_I 1i6h_I 1k83_I* 1nik_I 1nt9_I 1pqv_I 1r5u_I 1r9s_I* 1r9t_I* 1sfo_I* 1twa_I* 1twc_I* 1i50_I* 1twg_I* 1twh_I* 1wcm_I 1y1v_I 1y1w_I 1y1y_I 1y77_I* ...
Probab=25.52 E-value=38 Score=24.89 Aligned_cols=30 Identities=23% Similarity=0.486 Sum_probs=21.8
Q ss_pred CcccCccCccccccc-----ccCeeeeCCCCCccc
Q psy13753 14 KITPCDICSQVLRGH-----TRQGLKCRLCKTNVH 43 (229)
Q Consensus 14 ~pt~C~~C~~~l~Gl-----~~qgl~C~~C~~~~H 43 (229)
...||..|+++|.-- ...-|.|..|++...
T Consensus 3 ~~~FCp~CgnlL~~~~~~~~~~~~~~C~~C~y~~~ 37 (122)
T 1twf_I 3 TFRFCRDCNNMLYPREDKENNRLLFECRTCSYVEE 37 (122)
T ss_dssp CCCBCSSSCCBCEEEEETTTTEEEEECSSSSCEEE
T ss_pred CCCcccccCccCcccccCcCCCCEEECCcCCCeee
Confidence 357999999999621 123488999998664
No 76
>1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1
Probab=24.79 E-value=35 Score=25.69 Aligned_cols=37 Identities=19% Similarity=0.290 Sum_probs=30.0
Q ss_pred CcccccCCCCCCCCccCceEeeecccccchhccccCC
Q psy13753 135 PRLVVTSPGGPGGHTRQGLKCRLCKTNVHVDCQEKVP 171 (229)
Q Consensus 135 pt~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~ 171 (229)
.+.|..|..-+.-+...|..|.+|+..+=++|...++
T Consensus 55 ~~~C~~C~~~~g~l~~~g~~C~~C~~~VC~~C~~~~~ 91 (134)
T 1zbd_B 55 VNRCILCGEQLGMLGSASVVCEDCKKNVCTKCGVETS 91 (134)
T ss_dssp SSBCSSSCCBCSTTSCCEEECTTTCCEEETTSEEECC
T ss_pred CccccccCCCcccccCCCCCCCCCCcccccccCCccC
Confidence 4579999887644567799999999999999988764
No 77
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=24.40 E-value=31 Score=22.05 Aligned_cols=31 Identities=23% Similarity=0.636 Sum_probs=25.2
Q ss_pred CcccCccCcccccccccCeeeeCCCCCccccccccc
Q psy13753 14 KITPCDICSQVLRGHTRQGLKCRLCKTNVHVDCQEK 49 (229)
Q Consensus 14 ~pt~C~~C~~~l~Gl~~qgl~C~~C~~~~Hk~C~~~ 49 (229)
...+|..|+. . ..-+.|..|...+|-.|...
T Consensus 10 ~~~~C~vC~~--~---g~ll~CD~C~~~fH~~Cl~p 40 (61)
T 2l5u_A 10 HQDYCEVCQQ--G---GEIILCDTCPRAYHMVCLDP 40 (61)
T ss_dssp CCSSCTTTSC--C---SSEEECSSSSCEEEHHHHCT
T ss_pred CCCCCccCCC--C---CcEEECCCCChhhhhhccCC
Confidence 4578999987 2 36789999999999999774
Done!